Citrus Sinensis ID: 012436
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 464 | 2.2.26 [Sep-21-2011] | |||||||
| Q9XEE9 | 463 | GDP-Man:Man(3)GlcNAc(2)-P | yes | no | 0.987 | 0.989 | 0.764 | 0.0 | |
| Q5R7Z6 | 492 | GDP-Man:Man(3)GlcNAc(2)-P | yes | no | 0.971 | 0.916 | 0.454 | 1e-114 | |
| Q3TZM9 | 492 | GDP-Man:Man(3)GlcNAc(2)-P | yes | no | 0.980 | 0.924 | 0.444 | 1e-113 | |
| Q2TAA5 | 492 | GDP-Man:Man(3)GlcNAc(2)-P | yes | no | 0.971 | 0.916 | 0.451 | 1e-113 | |
| Q08B22 | 486 | GDP-Man:Man(3)GlcNAc(2)-P | N/A | no | 0.974 | 0.930 | 0.445 | 1e-111 | |
| Q7ZW24 | 500 | GDP-Man:Man(3)GlcNAc(2)-P | yes | no | 0.987 | 0.916 | 0.44 | 1e-110 | |
| Q6P312 | 487 | GDP-Man:Man(3)GlcNAc(2)-P | yes | no | 0.922 | 0.878 | 0.466 | 1e-109 | |
| Q54DM9 | 505 | GDP-Man:Man(3)GlcNAc(2)-P | yes | no | 0.913 | 0.839 | 0.458 | 1e-102 | |
| P53993 | 470 | Uncharacterized glycosylt | yes | no | 0.943 | 0.931 | 0.387 | 3e-88 | |
| Q8X092 | 556 | GDP-Man:Man(3)GlcNAc(2)-P | N/A | no | 0.879 | 0.733 | 0.394 | 3e-84 |
| >sp|Q9XEE9|ALG11_ARATH GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Arabidopsis thaliana GN=ALG11 PE=1 SV=2 | Back alignment and function desciption |
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Score = 748 bits (1931), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/459 (76%), Positives = 400/459 (87%), Gaps = 1/459 (0%)
Query: 1 MAPYGILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKA 60
MA Y IL + ++T + A L L V NAR++R +V FFHP TNDGGGGERVLWCAVKA
Sbjct: 1 MAIYFIL-YTLLTIIFAVSLSLFLSVINARKSRKRAVGFFHPYTNDGGGGERVLWCAVKA 59
Query: 61 IQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFT 120
IQEE+PDLDC+++TGDHD+ DSL RAVDRFGV L PPKV+HL +RKWIEESTYP FT
Sbjct: 60 IQEENPDLDCVIFTGDHDSSSDSLARRAVDRFGVHLQSPPKVIHLNKRKWIEESTYPHFT 119
Query: 121 MIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISR 180
MIGQS GSVYL+WEAL FTPLY+ DTSGYAFTYPLARIFGC+V+CYTHYPTISLDMISR
Sbjct: 120 MIGQSLGSVYLAWEALRMFTPLYFLDTSGYAFTYPLARIFGCKVVCYTHYPTISLDMISR 179
Query: 181 VREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLW 240
VR+ +SMYNN+ASIA+SNWLS CK+VYY FSWMYG+VGSC LAMVNSSWT+SHIE LW
Sbjct: 180 VRQRNSMYNNDASIAKSNWLSTCKLVYYRAFSWMYGMVGSCTHLAMVNSSWTKSHIEVLW 239
Query: 241 GIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDA 300
IP+RI RVYPPCDTSGLQ PLERS++ P IISVAQFRPEKAH LQLEAFS+AL KLDA
Sbjct: 240 RIPERITRVYPPCDTSGLQAFPLERSSDPPKIISVAQFRPEKAHMLQLEAFSLALEKLDA 299
Query: 301 DLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGI 360
D+PRP+LQFVGSCRN SDEERLQ LKD+++ELKVDG+V+FYKN +YR+LV+LLG AV G+
Sbjct: 300 DVPRPKLQFVGSCRNNSDEERLQKLKDRAVELKVDGDVQFYKNAMYRELVELLGNAVAGL 359
Query: 361 HSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQNAEEYADAIVKI 420
H MIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQ+TGFLA+ EEYA+AI++I
Sbjct: 360 HGMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQKTGFLAETVEEYAEAILEI 419
Query: 421 ISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIRPIL 459
+ M ETERL+MA +AR+RAARFSEQRF EDFK AIRPI
Sbjct: 420 VKMNETERLKMAESARKRAARFSEQRFCEDFKTAIRPIF 458
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Required for N-linked oligosaccharide assembly. Has a role in the last step of the synthesis of the Man(5)GlcNAc(2)-PP-dolichol core oligosaccharide on the cytoplasmic face of the endoplasmic reticulum. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 3EC: 1 |
| >sp|Q5R7Z6|ALG11_PONAB GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Pongo abelii GN=ALG11 PE=2 SV=2 | Back alignment and function description |
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Score = 411 bits (1056), Expect = e-114, Method: Compositional matrix adjust.
Identities = 208/458 (45%), Positives = 292/458 (63%), Gaps = 7/458 (1%)
Query: 6 ILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEES 65
I++W I +L L S N + +AFFHP N GGGGERVLWCA++A+Q++
Sbjct: 37 IVLWG-IRLLLQRKKKLVSTSKNGKNQMV--IAFFHPYCNAGGGGERVLWCALRALQKKY 93
Query: 66 PDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQS 125
P+ +VYTGD + +L A RF + L+HP + V L +R +E+S YP FT++GQS
Sbjct: 94 PEAVYVVYTGDVNVNGQQILEGAFRRFNIRLIHPVQFVFLRKRYLVEDSLYPHFTLLGQS 153
Query: 126 FGSVYLSWEALCKFTPLYYFDTSGYAFTYPLAR-IFGCRVICYTHYPTISLDMISRVREG 184
GS++L WEAL + P Y D+ GYAFT PL + I GC+V Y HYPTIS DM+S V+
Sbjct: 154 LGSIFLGWEALMQCVPDVYIDSMGYAFTLPLFKYIGGCQVGSYVHYPTISTDMLSVVKNQ 213
Query: 185 SSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPD 244
+ +NN A I ++ +LS+ K++YY F+++YGLVGSC+D+ MVNSSWT +HI LW + +
Sbjct: 214 NIGFNNAAFITRNPFLSKVKLIYYYLFAFIYGLVGSCSDVVMVNSSWTLNHILSLWKVGN 273
Query: 245 RIKRVYPPCDTSGLQVLPLERSTEYPA--IISVAQFRPEKAHPLQLEAFSVAL-RKLDAD 301
VYPPCD +PL P ++SV QFRPEK HPLQ+ AF+ L +K+
Sbjct: 274 CTNIVYPPCDVQTFLDIPLHEKKMTPGHLLVSVGQFRPEKNHPLQIRAFAKLLNKKMVES 333
Query: 302 LPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIH 361
P +L F+G CRNK DE R+ L+ S +L V VEF N+ + +L L A +G+H
Sbjct: 334 PPSLKLVFIGGCRNKDDELRVNQLRRLSEDLGVQEYVEFKINIPFDELKNYLSEATIGLH 393
Query: 362 SMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQNAEEYADAIVKII 421
+M +EHFGI VVE MAAG I +AHNS GPK+DIV+ +G TGFLA++ E+YA+ I I+
Sbjct: 394 TMWNEHFGIGVVECMAAGTIILAHNSGGPKLDIVVPHEGDITGFLAESEEDYAETIAHIL 453
Query: 422 SMPETERLEMAAAARRRAARFSEQRFYEDFKAAIRPIL 459
SM +RL++ +AR +RFS+Q F F +++ +
Sbjct: 454 SMSAEKRLQIRKSARASVSRFSDQEFEVTFLSSVEKLF 491
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Mannosyltransferase involved in the last steps of the synthesis of Man5GlcNAc(2)-PP-dolichol core oligosaccharide on the cytoplasmic face of the endoplasmic reticulum. Catalyzes the addition of the 4th and 5th mannose residues to the dolichol-linked oligosaccharide chain. Pongo abelii (taxid: 9601) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 EC: 1 |
| >sp|Q3TZM9|ALG11_MOUSE GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Mus musculus GN=Alg11 PE=2 SV=1 | Back alignment and function description |
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Score = 410 bits (1054), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/468 (44%), Positives = 296/468 (63%), Gaps = 13/468 (2%)
Query: 5 GILIWAVITAVLA-SILILASHVHNARRNRTTS--------VAFFHPNTNDGGGGERVLW 55
G++I V+ L + ++ H+ +++ +TS VAFFHP N GGGGERVLW
Sbjct: 24 GLMICGVLCVYLVIGLWVIRWHLQRKKKSVSTSKNGKEQTVVAFFHPYCNAGGGGERVLW 83
Query: 56 CAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115
CA++A+Q++ P+ +VYTGD + +L A RF ++L HP + V L +R +E+S
Sbjct: 84 CALRALQKKYPEAVYVVYTGDINVSGQQILDGAFRRFNIKLAHPVQFVFLRKRYLVEDSR 143
Query: 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLAR-IFGCRVICYTHYPTIS 174
YP FT++GQS GS+ L WEAL + P Y D+ GYAFT PL + + GCRV Y HYPTIS
Sbjct: 144 YPHFTLLGQSLGSILLGWEALMQRVPDVYIDSMGYAFTLPLFKYVGGCRVGSYVHYPTIS 203
Query: 175 LDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQS 234
DM+S V+ + +NN A I+++ LS+ K++YY F+++YGLVGSC+D+ MVNSSWT +
Sbjct: 204 TDMLSVVKNQNPGFNNAAFISRNALLSKAKLIYYYLFAFVYGLVGSCSDIVMVNSSWTLN 263
Query: 235 HIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPA--IISVAQFRPEKAHPLQLEAFS 292
HI LW + VYPPCD +PL P ++S+ QFRPEK H LQ++AF+
Sbjct: 264 HILSLWKVGHCTNIVYPPCDVQTFLDIPLHEKKVTPGHLLVSIGQFRPEKNHALQIKAFA 323
Query: 293 VALRKLDADLPRP-RLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVK 351
L + A+L +L +G CRNK DE R+ L+ S L V NVEF N+ + +L
Sbjct: 324 KLLNEKAAELGHSLKLVLIGGCRNKDDEFRVNQLRSLSENLGVQENVEFKINISFDELKN 383
Query: 352 LLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQNAE 411
L A +G+H+M +EHFGI VVE MAAG + +AHNS GPK+DIV+ +GQ TGFLA++ E
Sbjct: 384 YLSEATIGLHTMWNEHFGIGVVECMAAGTVILAHNSGGPKLDIVIPHEGQITGFLAESEE 443
Query: 412 EYADAIVKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIRPIL 459
YAD++ I+S+ ERL++ AR +RFS+Q F F ++ +L
Sbjct: 444 GYADSMAHILSLSAEERLQIRKNARASISRFSDQEFEVAFLCSMEKLL 491
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Mannosyltransferase involved in the last steps of the synthesis of Man5GlcNAc(2)-PP-dolichol core oligosaccharide on the cytoplasmic face of the endoplasmic reticulum. Catalyzes the addition of the 4th and 5th mannose residues to the dolichol-linked oligosaccharide chain. Mus musculus (taxid: 10090) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 EC: 1 |
| >sp|Q2TAA5|ALG11_HUMAN GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Homo sapiens GN=ALG11 PE=1 SV=2 | Back alignment and function description |
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Score = 409 bits (1051), Expect = e-113, Method: Compositional matrix adjust.
Identities = 207/458 (45%), Positives = 291/458 (63%), Gaps = 7/458 (1%)
Query: 6 ILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEES 65
I++W I +L L S N + +AFFHP N GGGGERVLWCA++A+Q++
Sbjct: 37 IVLWG-IRLLLQRKKKLVSTSKNGKNQMV--IAFFHPYCNAGGGGERVLWCALRALQKKY 93
Query: 66 PDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQS 125
P+ +VYTGD + +L A RF + L+HP + V L +R +E+S YP FT++GQS
Sbjct: 94 PEAVYVVYTGDVNVNGQQILEGAFRRFNIRLIHPVQFVFLRKRYLVEDSLYPHFTLLGQS 153
Query: 126 FGSVYLSWEALCKFTPLYYFDTSGYAFTYPLAR-IFGCRVICYTHYPTISLDMISRVREG 184
GS++L WEAL + P Y D+ GYAFT PL + I GC+V Y HYPTIS DM+S V+
Sbjct: 154 LGSIFLGWEALMQCVPDVYIDSMGYAFTLPLFKYIGGCQVGSYVHYPTISTDMLSVVKNQ 213
Query: 185 SSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPD 244
+ +NN A I ++ +LS+ K++YY F+++YGLVGSC+D+ MVNSSWT +HI LW + +
Sbjct: 214 NIGFNNAAFITRNPFLSKVKLIYYYLFAFIYGLVGSCSDVVMVNSSWTLNHILSLWKVGN 273
Query: 245 RIKRVYPPCDTSGLQVLPLERSTEYPA--IISVAQFRPEKAHPLQLEAFSVAL-RKLDAD 301
VYPPCD +PL P ++SV QFRPEK HPLQ+ AF+ L +K+
Sbjct: 274 CTNIVYPPCDVQTFLDIPLHEKKMTPGHLLVSVGQFRPEKNHPLQIRAFAKLLNKKMVES 333
Query: 302 LPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIH 361
P +L +G CRNK DE R+ L+ S +L V VEF N+ + +L L A +G+H
Sbjct: 334 PPSLKLVLIGGCRNKDDELRVNQLRRLSEDLGVQEYVEFKINIPFDELKNYLSEATIGLH 393
Query: 362 SMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQNAEEYADAIVKII 421
+M +EHFGI VVE MAAG I +AHNS GPK+DIV+ +G TGFLA++ E+YA+ I I+
Sbjct: 394 TMWNEHFGIGVVECMAAGTIILAHNSGGPKLDIVVPHEGDITGFLAESEEDYAETIAHIL 453
Query: 422 SMPETERLEMAAAARRRAARFSEQRFYEDFKAAIRPIL 459
SM +RL++ +AR +RFS+Q F F +++ +
Sbjct: 454 SMSAEKRLQIRKSARASVSRFSDQEFEVTFLSSVEKLF 491
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Mannosyltransferase involved in the last steps of the synthesis of Man5GlcNAc(2)-PP-dolichol core oligosaccharide on the cytoplasmic face of the endoplasmic reticulum. Catalyzes the addition of the 4th and 5th mannose residues to the dolichol-linked oligosaccharide chain. Homo sapiens (taxid: 9606) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 EC: 1 |
| >sp|Q08B22|ALG11_XENLA GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Xenopus laevis GN=alg11 PE=2 SV=2 | Back alignment and function description |
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Score = 403 bits (1035), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/467 (44%), Positives = 288/467 (61%), Gaps = 15/467 (3%)
Query: 6 ILIWAVITAVLASILILASHVHNARRNRT---------TSVAFFHPNTNDGGGGERVLWC 56
+LI +V ++ +L + + + R+ + VAFFHP N GGGGERVLWC
Sbjct: 21 VLITSVGLCLIFVLLFICTRLWVQRKKKVEIGKDGKKKKVVAFFHPYCNAGGGGERVLWC 80
Query: 57 AVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTY 116
A++++Q+ D ++YTGD DA + +L A RF ++L HP + + L +R +E S Y
Sbjct: 81 ALRSLQKRYKDAIYVIYTGDKDASEEQILNGAAARFNIKLSHPVRFIFLEKRGLVEASCY 140
Query: 117 PRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIF-GCRVICYTHYPTISL 175
PRFT++GQS GSV L WEAL K P Y D+ GYAFT PL + GC V CY HYPTIS+
Sbjct: 141 PRFTLLGQSLGSVVLGWEALTKCVPDIYIDSMGYAFTLPLFKYLGGCHVGCYVHYPTISM 200
Query: 176 DMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSH 235
DM+S VR + +NN A I+ + LS+ K++YY F+ YG VGSC+D+ MVNS+WT SH
Sbjct: 201 DMLSVVRSQHARFNNAAFISNNPVLSRLKLIYYYLFALFYGWVGSCSDVIMVNSTWTFSH 260
Query: 236 IEKLWGIPDRIKRVYPPCDTSGLQVLPLE--RSTEYPAIISVAQFRPEKAHPLQLEAFSV 293
I LW DR VYPPCD + + + E +++S+ QFRPEK HPLQ+ AF+
Sbjct: 261 ILDLWKCSDRTSIVYPPCDVQTFLEIDINQHKENEEHSVVSIGQFRPEKDHPLQIRAFAA 320
Query: 294 ALRKLDADL-PRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKL 352
L K A+ + +L +G CRN DE R+ LK S EL + VEF N+ + +L K
Sbjct: 321 LLEKKTAEQRAKLKLILIGGCRNDEDELRVSELKKLSSELGIP--VEFKVNVPFEELKKH 378
Query: 353 LGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQNAEE 412
L A +G+H+M +EHFGI +VE MAAG I +AHNS GPK+DIV+ + QQTGFLA + +
Sbjct: 379 LSEATIGLHTMWNEHFGIGIVECMAAGTIILAHNSGGPKLDIVVPHEEQQTGFLADSVDS 438
Query: 413 YADAIVKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIRPIL 459
YA A+ I+S+ +RL + AR RFS+Q F +F A+ P+
Sbjct: 439 YAAAMDHILSLTPEQRLSIRQNARLSVGRFSDQEFEANFLASSEPLF 485
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Xenopus laevis (taxid: 8355) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 EC: 1 |
| >sp|Q7ZW24|ALG11_DANRE GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Danio rerio GN=alg11 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 399 bits (1024), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/475 (44%), Positives = 286/475 (60%), Gaps = 17/475 (3%)
Query: 1 MAPYGILIWAVITAVLASILILASHVHNARRNRTT-----SVAFFHPNTNDGGGGERVLW 55
M P L + + T + I+ + S + R+ R +VAFFHP N GGGGERVLW
Sbjct: 22 MLPCFYLSFLLTTILFLFIMGVRSWLQMKRKTRRVQDGRPAVAFFHPYCNAGGGGERVLW 81
Query: 56 CAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115
CA++A+Q D+ +VYTGD + +L A RF + L P K V L R +E
Sbjct: 82 CALRALQNRYQDVSFVVYTGDQGVTAEEILDGARRRFNIRLPRPVKFVFLKHRLLVEAKL 141
Query: 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFG-CRVICYTHYPTIS 174
YP FT++GQS GS++L WEAL +F P Y D+ G+AFT P+ R G C+V Y HYPTIS
Sbjct: 142 YPHFTLLGQSVGSIFLGWEALTEFVPDLYIDSMGFAFTLPVFRYLGGCQVGSYVHYPTIS 201
Query: 175 LDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQS 234
DM+S VRE + +NN I+ + LS K++YY F+ +YGL GSC+D+ MVNS+WT
Sbjct: 202 TDMLSVVRERNPRFNNADYISSNPVLSAIKVIYYCVFALLYGLAGSCSDVIMVNSTWTLG 261
Query: 235 HIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYP------AIISVAQFRPEKAHPLQL 288
HI LW P+R VYPPCD +P+ E +++SV QFRPEK H LQ+
Sbjct: 262 HILALWRTPNRTSVVYPPCDVQAFLDVPIGEDNEEKEQKKCHSLVSVGQFRPEKDHQLQI 321
Query: 289 EAFSVALRKLDADLPRPR----LQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNL 344
AF L + +A+ P R L +G CRN+ DE+R+ L+ EL + VEF N+
Sbjct: 322 RAFKKLLDRKEAE-PAGREAVKLVLIGGCRNQEDEDRVLMLRGLCQELGIADRVEFKLNI 380
Query: 345 LYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTG 404
+++L K L A +G+H+M +EHFGI +VE MAAG I +AH S GPK+DIV+ DG TG
Sbjct: 381 PFQELKKDLTDATIGLHTMWNEHFGIGIVECMAAGTIILAHKSGGPKLDIVVPYDGGPTG 440
Query: 405 FLAQNAEEYADAIVKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIRPIL 459
FLA + + YADA+ +I+SM RLEM AR +RFS+Q F F +A+ P++
Sbjct: 441 FLADDEDNYADAMERILSMSPATRLEMRRRARLSVSRFSDQEFEGSFLSAMEPLM 495
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Danio rerio (taxid: 7955) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 EC: 1 |
| >sp|Q6P312|ALG11_XENTR GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Xenopus tropicalis GN=alg11 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 395 bits (1015), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/435 (46%), Positives = 280/435 (64%), Gaps = 7/435 (1%)
Query: 28 NARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLAR 87
+ ++ R VAFFHP N GGGGERVLWCA++++Q+ D ++YTGD D + +L
Sbjct: 56 DGKKKRV--VAFFHPYCNAGGGGERVLWCALRSLQKRYKDAIYVIYTGDKDVSEEQILNG 113
Query: 88 AVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDT 147
A RF ++L HP K + L +R +E S YPRFT++GQS GSV L WEAL K P Y D+
Sbjct: 114 AAARFNIKLSHPVKFIFLEKRGLVEASFYPRFTLLGQSLGSVVLGWEALTKCVPDIYIDS 173
Query: 148 SGYAFTYPLAR-IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIV 206
GYAFT PL + + GC+V CY HYPTIS+DM+S VR ++ +NN A I+ + LS+ K++
Sbjct: 174 MGYAFTLPLFKYVGGCQVGCYVHYPTISMDMLSVVRSQNARFNNAAFISNNPVLSRLKLI 233
Query: 207 YYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLE-- 264
YY F+ +YG VGSC+D+ MVNS+WT +HI LW +R VYPPCD + L
Sbjct: 234 YYYLFAVIYGWVGSCSDVIMVNSTWTFAHILDLWKCSERTSIVYPPCDVQTFLDINLNQH 293
Query: 265 RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQS 324
+ E +I+S+ QFRPEK HPLQ+ AF+ L+K + + +L +G CRN DE R+
Sbjct: 294 KDIEEHSIVSIGQFRPEKDHPLQICAFAALLKKKTTEKLKLKLILIGGCRNNEDELRVSE 353
Query: 325 LKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIA 384
LK S EL + VEF N+ + +L K L A +G+H+M +EHFGI +VE MAAG I +A
Sbjct: 354 LKKLSSELGIP--VEFKVNIPFAELKKHLSEATIGLHTMWNEHFGIGIVECMAAGTIILA 411
Query: 385 HNSAGPKMDIVLEEDGQQTGFLAQNAEEYADAIVKIISMPETERLEMAAAARRRAARFSE 444
HNS GPK+DIV+ + +TGFLA + E YA A+ I+ + +RL + ARR ARFS+
Sbjct: 412 HNSGGPKLDIVVPYEEHETGFLADSVESYAAAMDYILCLTPEQRLTIRQNARRSVARFSD 471
Query: 445 QRFYEDFKAAIRPIL 459
Q F +F A+ P+
Sbjct: 472 QEFEANFLASSEPLF 486
|
Xenopus tropicalis (taxid: 8364) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 EC: 1 |
| >sp|Q54DM9|ALG11_DICDI GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Dictyostelium discoideum GN=alg11 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 373 bits (958), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/438 (45%), Positives = 273/438 (62%), Gaps = 14/438 (3%)
Query: 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVE 95
S+ FFHP GGGGERVLWCA+K+IQEE P + C+VYTGD ++ D + + F +E
Sbjct: 63 SIGFFHPYCTAGGGGERVLWCAIKSIQEEYPYVRCVVYTGDKES-DDEIFNKVKKTFDIE 121
Query: 96 LLHPP-KVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTY 154
L + + L +RKW+E STYPRFT+IGQS GS+ L WEAL KF P + D+ GYAFT+
Sbjct: 122 LGRDNLEFIRLKKRKWVEASTYPRFTLIGQSLGSMILGWEALTKFVPTIFLDSMGYAFTF 181
Query: 155 PL-ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSW 213
P+ + I G V CY HYPTIS DMIS V+ S +NN+ SI+ + + + K++YY FS
Sbjct: 182 PIFSLIGGSTVACYVHYPTISSDMISSVKSSSYSFNNDVSISSNKFKTISKLIYYNIFSK 241
Query: 214 MYGLVGSCADLAMVNSSWTQSHIEKLWG--IPDRIKRVYPPCDTSGLQVLPLE--RSTEY 269
+Y +VGS + L MVN +WT +HI +W + VYPP D G + L L T
Sbjct: 242 IYQIVGSFSKLVMVNGTWTGNHIRDIWKKQFGYDLFIVYPPVDVKGRKQLKLGWMDGTRK 301
Query: 270 PAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRP---RLQFVGSCRNKSDEERLQSLK 326
I+S+AQFRPEK H LQL + L K + +P +L VG R+++D +R++ L+
Sbjct: 302 NMILSIAQFRPEKNHQLQLRTLAHLLEKYPSHREQPLNTKLVLVGGVRDQADRDRVEQLR 361
Query: 327 DKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHN 386
+ S EL ++ +VEF + L +LL A VGIH+M +EHFGI VVE MAAG IP+A+N
Sbjct: 362 NLSKELNIEDHVEFQIGISSDQLNQLLSEASVGIHTMYNEHFGIGVVELMAAGVIPVANN 421
Query: 387 SAGPKMDIVLEEDGQQTGFLAQNAEEYADAIVKIISMPETERLEMAAAARRRAARFSEQR 446
SAGPK DIV ED TGFLA +EYA+ I +I++ E + +EM AR RFSE
Sbjct: 422 SAGPKEDIVRHED---TGFLASTIQEYAEYIHEILAYRE-KYVEMQKKARDSTDRFSESN 477
Query: 447 FYEDFKAAIRPILCHAAR 464
F F I+P++ + R
Sbjct: 478 FSNQFLKYIKPLINQSLR 495
|
Dictyostelium discoideum (taxid: 44689) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 EC: 1 |
| >sp|P53993|YMP8_CAEEL Uncharacterized glycosyltransferase B0361.8 OS=Caenorhabditis elegans GN=B0361.8 PE=3 SV=3 | Back alignment and function description |
|---|
Score = 326 bits (835), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 173/447 (38%), Positives = 255/447 (57%), Gaps = 9/447 (2%)
Query: 20 LILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDA 79
LI+ +++ R ++ +VAFFHP N GGGGERVLW A++ +Q++ PD VY+GD DA
Sbjct: 26 LIIPFSLYSGFRRKSKTVAFFHPYCNAGGGGERVLWAAIRTMQKKFPDHKYFVYSGDTDA 85
Query: 80 FPDSLLARAVDRFGVELLHPPKV--VHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALC 137
+ +L +A RFG+EL P + ++L+ R +E Y TM+ Q+ + L+ EA
Sbjct: 86 TKEQILLKARQRFGIEL-DPSNIQFIYLHWRTLVEARHYKHCTMLFQALAGLILALEAWF 144
Query: 138 KFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQS 197
+ P + D+ GY + P R+ G +V+ Y HYPTIS DM+ V +NN+++IAQS
Sbjct: 145 RMVPAVFIDSMGYPLSLPAFRLSGSKVVAYVHYPTISCDMLDVVESRQETFNNSSTIAQS 204
Query: 198 NWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSG 257
N LS K+ YY F+ +Y L G A + MVN SWTQ HI +W D + VYPPCD
Sbjct: 205 NVLSWGKLTYYRLFACLYWLAGKAAHVGMVNGSWTQRHITSIWSRRD-VSIVYPPCDVEA 263
Query: 258 LQVL-----PLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGS 312
+ L T+ ++SV Q RPEK H LQLE L+ L G
Sbjct: 264 FLNIESVAESLLEDTKTVRLLSVGQIRPEKNHKLQLEVLHDVKEPLEKMGYNVELCIAGG 323
Query: 313 CRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISV 372
CRN+ D+ER++ LK+++ +L + + + N+ Y DLV L A++ IH+M +EHFGISV
Sbjct: 324 CRNEEDQERVKMLKNEAEKLDISEQLIWQLNVPYEDLVVELSKALISIHTMHNEHFGISV 383
Query: 373 VEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQNAEEYADAIVKIISMPETERLEMA 432
VE MAA I ++++S GP+MDIV + +G G+L+ EEY + I+KI+ +R +
Sbjct: 384 VEAMAASTIILSNDSGGPRMDIVKDYEGHCVGYLSITKEEYVETILKIVEEGLKKRNDTR 443
Query: 433 AAARRRAARFSEQRFYEDFKAAIRPIL 459
AR+ RF E F + I +L
Sbjct: 444 KYARKSLTRFGEAAFETHWNKEIEKVL 470
|
Caenorhabditis elegans (taxid: 6239) EC: 2 EC: . EC: 4 EC: . EC: - EC: . EC: - |
| >sp|Q8X092|ALG11_NEUCR GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=alg-11 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 312 bits (800), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 171/434 (39%), Positives = 249/434 (57%), Gaps = 26/434 (5%)
Query: 37 VAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVEL 96
V FFHP N GGGGERVLW A++A Q+ P C+VYTGDHD +++L+R RF + L
Sbjct: 102 VGFFHPFCNAGGGGERVLWAAIRATQKRWPKAKCVVYTGDHDVSKEAILSRVEQRFNIHL 161
Query: 97 LHPPKVVHLY--RRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTY 154
HPP V LY R+W+ ST+P FT+ GQSFGS+ ++W+A P + DT GYAF
Sbjct: 162 -HPPTVNFLYLSTRRWVLASTWPYFTLAGQSFGSLIMAWDAFSLLVPDIFVDTMGYAFAL 220
Query: 155 PLARIFGCRV--ICYTHYPTISLDMISRVREGSSMYNNNASIAQ-SNWLSQCKIVYYTFF 211
+R V Y HYPTIS DM+ + S++ + + + + + K +Y+ F
Sbjct: 221 GFSRFLFRDVPTAAYVHYPTISTDMLESLDPASAVGSQGVNAGKGTGAKGRAKKIYWQLF 280
Query: 212 SWMYGLVGSCADLAMVNSSWTQSHIEKLWG--------IP------DRIKRVYPPCDTSG 257
+ +Y L+G+ D+ M NS+WTQ+HIEKLWG +P + I VYPP
Sbjct: 281 ARLYSLMGASVDVVMTNSTWTQAHIEKLWGPVRNLTGAVPGIKSKVNPIAVVYPPVAVEE 340
Query: 258 LQVL----PLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSC 313
L+ P ++ +AQFRPEK H L ++AF+ L+ +L VGS
Sbjct: 341 LEQEVEVSPESEKRRENVLLYIAQFRPEKNHQLIVQAFAEFLKSGSEAARDAKLVLVGSV 400
Query: 314 RNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVV 373
R+ D +R+ L+ EL + VEF+ + + D+++ L A VG++ M +EHFGI VV
Sbjct: 401 RDDYDSKRVYKLRLLVNELHIKDRVEFHLDASWPDILEWLRRASVGVNGMWNEHFGIGVV 460
Query: 374 EYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQNAEEYADAIVKIISMPETERLEMAA 433
EY AAG I + H+S GPK+DIV+E DG+ TGF A ++E+A+ K +S+P + +
Sbjct: 461 EYQAAGLISVVHDSGGPKLDIVVEVDGEPTGFHATTSKEFAEGFEKALSLPNPYAVRL-- 518
Query: 434 AARRRAARFSEQRF 447
AR+ A RF+E+ F
Sbjct: 519 RARKSAKRFTEEEF 532
|
Required for N-linked oligosaccharide assembly. Has a role in the last step of the synthesis of the Man(5)GlcNAc(2)-PP-dolichol core oligosaccharide on the cytoplasmic face of the endoplasmic reticulum. Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) (taxid: 367110) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 464 | ||||||
| 255574810 | 465 | glycosyl transferase, putative [Ricinus | 0.989 | 0.987 | 0.786 | 0.0 | |
| 224119626 | 466 | predicted protein [Populus trichocarpa] | 0.989 | 0.984 | 0.793 | 0.0 | |
| 225448485 | 463 | PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Do | 0.987 | 0.989 | 0.793 | 0.0 | |
| 42569790 | 463 | alpha-1,2-mannosyltransferase [Arabidops | 0.987 | 0.989 | 0.764 | 0.0 | |
| 449460937 | 463 | PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Do | 0.989 | 0.991 | 0.782 | 0.0 | |
| 68160672 | 463 | glycosyl transferase family 1 protein [N | 0.946 | 0.948 | 0.783 | 0.0 | |
| 356520284 | 456 | PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Do | 0.982 | 1.0 | 0.773 | 0.0 | |
| 297789912 | 463 | glycosyl transferase family 1 protein [A | 0.976 | 0.978 | 0.750 | 0.0 | |
| 147866333 | 717 | hypothetical protein VITISV_005430 [Viti | 0.989 | 0.640 | 0.741 | 0.0 | |
| 356560288 | 460 | PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Do | 0.941 | 0.95 | 0.787 | 0.0 |
| >gi|255574810|ref|XP_002528312.1| glycosyl transferase, putative [Ricinus communis] gi|223532267|gb|EEF34070.1| glycosyl transferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 778 bits (2010), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/459 (78%), Positives = 405/459 (88%)
Query: 6 ILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEES 65
+ I V TA+ + AS + N R NR +V FFHP TNDGGGGERVLWCAVKAIQEES
Sbjct: 7 LFIIPVFTAIFTLLSTFASQIINGRLNRKQAVGFFHPFTNDGGGGERVLWCAVKAIQEES 66
Query: 66 PDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQS 125
P LDC++YTGDHDA P SL +RA DRFGV LL+PP VVHLY+RKW+EE++YPRFT+IGQS
Sbjct: 67 PHLDCVIYTGDHDASPQSLASRATDRFGVNLLYPPMVVHLYKRKWVEETSYPRFTVIGQS 126
Query: 126 FGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGS 185
FGS+YL+WEALCKF PLYYFDT GYAFTYPLARIFGC+VICYTHYPTISLDMISRVR+ S
Sbjct: 127 FGSIYLAWEALCKFPPLYYFDTCGYAFTYPLARIFGCKVICYTHYPTISLDMISRVRDRS 186
Query: 186 SMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDR 245
SMYNNNASIA+S WLS+CKI+YYTFFSWMYG VGSCA LA+VNSSWTQSHIEKLW IP+R
Sbjct: 187 SMYNNNASIARSGWLSRCKIIYYTFFSWMYGFVGSCAHLAIVNSSWTQSHIEKLWKIPNR 246
Query: 246 IKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRP 305
IKRVYPPCDTSGLQ LPLERS + P +SVAQFRPEKAH LQLEAF+VA+ KLDAD PRP
Sbjct: 247 IKRVYPPCDTSGLQALPLERSVDPPRFVSVAQFRPEKAHSLQLEAFAVAIGKLDADSPRP 306
Query: 306 RLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMID 365
+LQFVGSCRN DEERLQ L+DK+IELKV+G+VEFYKN+LYRDLV LLGGA+VG+HSMID
Sbjct: 307 KLQFVGSCRNNFDEERLQKLQDKAIELKVNGDVEFYKNVLYRDLVSLLGGAIVGMHSMID 366
Query: 366 EHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQNAEEYADAIVKIISMPE 425
EHFGI VVEYMAAGAIPIAHNSAGPKMDIVLEEDG+QTGFL QN EEYADAI+ ++ MP+
Sbjct: 367 EHFGICVVEYMAAGAIPIAHNSAGPKMDIVLEEDGEQTGFLCQNVEEYADAILSVLRMPD 426
Query: 426 TERLEMAAAARRRAARFSEQRFYEDFKAAIRPILCHAAR 464
TE L+MAAA R+RA RFSEQRFYEDFKAAIRPI+ A+R
Sbjct: 427 TETLKMAAAGRKRANRFSEQRFYEDFKAAIRPIVNQASR 465
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224119626|ref|XP_002318120.1| predicted protein [Populus trichocarpa] gi|222858793|gb|EEE96340.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 776 bits (2004), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/460 (79%), Positives = 420/460 (91%), Gaps = 1/460 (0%)
Query: 6 ILIWAVITAVLASILILAS-HVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEE 64
++I++++T++L IL + S + N RR R +V FFHP TNDGGGGERVLWCAVKAIQEE
Sbjct: 7 LVIFSLLTSLLTFILTITSREIINGRRTRQRAVGFFHPYTNDGGGGERVLWCAVKAIQEE 66
Query: 65 SPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQ 124
SPDLDC++YTGDHD+ +SL++RA+DRFGV+LL PPKVVHLY+RKWIEE++YPRFTMIGQ
Sbjct: 67 SPDLDCVIYTGDHDSSSESLMSRALDRFGVQLLTPPKVVHLYKRKWIEETSYPRFTMIGQ 126
Query: 125 SFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREG 184
SFGSVYLSWEALCKFTPLYYFDTSGYAFTYP+AR+FGC+VICYTHYPTISLDMISRVR+
Sbjct: 127 SFGSVYLSWEALCKFTPLYYFDTSGYAFTYPVARLFGCKVICYTHYPTISLDMISRVRDR 186
Query: 185 SSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPD 244
SSMYNN+ASIA+S WLS CKI+YYT FSWMYG VGSCA LAMVNSSWTQSHIEKLW IP
Sbjct: 187 SSMYNNDASIARSGWLSWCKIIYYTLFSWMYGFVGSCAHLAMVNSSWTQSHIEKLWRIPS 246
Query: 245 RIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPR 304
RIKRVYPPCDTSGLQVLPLER T P ISVAQFRPEKAHPLQLEAFS+A+R+LDAD+PR
Sbjct: 247 RIKRVYPPCDTSGLQVLPLERPTTTPIFISVAQFRPEKAHPLQLEAFSLAIRRLDADMPR 306
Query: 305 PRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMI 364
P LQFVGSCRNK DE+RLQ L+DK++EL VDG+V+FYKN++YRDLV+LLGGAV G+HSM+
Sbjct: 307 PILQFVGSCRNKFDEDRLQKLQDKAVELNVDGDVQFYKNVMYRDLVRLLGGAVAGMHSMV 366
Query: 365 DEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQNAEEYADAIVKIISMP 424
DEHFGISVVEYMAAGA+PIAHNSAGPKMDIVLEEDGQQTGFLAQN +EYA+AI+K++ MP
Sbjct: 367 DEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLEEDGQQTGFLAQNVDEYAEAILKVLRMP 426
Query: 425 ETERLEMAAAARRRAARFSEQRFYEDFKAAIRPILCHAAR 464
ETERL++AAAAR+RA RFSEQRFYED KAAI+PIL H +R
Sbjct: 427 ETERLKIAAAARKRAGRFSEQRFYEDLKAAIQPILNHVSR 466
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225448485|ref|XP_002271550.1| PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase [Vitis vinifera] gi|297736585|emb|CBI25456.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 760 bits (1962), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/459 (79%), Positives = 406/459 (88%), Gaps = 1/459 (0%)
Query: 6 ILIWAVITAVLASILILAS-HVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEE 64
+++W +I+ +A IL S + R NR VAFFHP TNDGGGGERVLWCAVKAIQEE
Sbjct: 5 VVVWCLISGAVALILSYISLSIVKGRSNRRHGVAFFHPYTNDGGGGERVLWCAVKAIQEE 64
Query: 65 SPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQ 124
S DLDC++YTGDHDA PDSL+ARAV RFGVELL+PPKVVHLY+RKWIEE+ YPRFTMIGQ
Sbjct: 65 SSDLDCVIYTGDHDASPDSLMARAVQRFGVELLYPPKVVHLYKRKWIEETMYPRFTMIGQ 124
Query: 125 SFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREG 184
S GSVYLSWEALCK+TPLYY DTSGYAF YP+AR+FGC+VICYTHYPTISLDMISRV++
Sbjct: 125 SLGSVYLSWEALCKYTPLYYIDTSGYAFAYPVARLFGCKVICYTHYPTISLDMISRVQDQ 184
Query: 185 SSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPD 244
+SMYNN+A IA+S WLS CK++YY F WMYG VGS A LAMVNSSWTQSHIE LW IP+
Sbjct: 185 NSMYNNDALIAKSTWLSLCKVIYYRLFGWMYGTVGSFAHLAMVNSSWTQSHIESLWRIPE 244
Query: 245 RIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPR 304
R KRVYPPCDTSGLQ LPLER PAIISVAQFRPEKAH LQL AFSVA+R LDADLPR
Sbjct: 245 RTKRVYPPCDTSGLQALPLERLRSSPAIISVAQFRPEKAHTLQLMAFSVAIRNLDADLPR 304
Query: 305 PRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMI 364
P+LQFVGSCRNKSDEERLQ+LKDK+I+LK++G+VEF+KN++YRDLV LLGGAV GIH MI
Sbjct: 305 PKLQFVGSCRNKSDEERLQNLKDKAIQLKLEGDVEFHKNVMYRDLVGLLGGAVAGIHGMI 364
Query: 365 DEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQNAEEYADAIVKIISMP 424
DEHFGISVVEYMAAGAIPIA+NSAGPKMDIVLEEDGQQTGFLAQ EEYADAI+KI+ MP
Sbjct: 365 DEHFGISVVEYMAAGAIPIANNSAGPKMDIVLEEDGQQTGFLAQTVEEYADAILKILRMP 424
Query: 425 ETERLEMAAAARRRAARFSEQRFYEDFKAAIRPILCHAA 463
ET+RLEMAAAARRRA RFSEQRFYEDFKAA+RPIL HA+
Sbjct: 425 ETKRLEMAAAARRRAGRFSEQRFYEDFKAAVRPILSHAS 463
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|42569790|ref|NP_181548.2| alpha-1,2-mannosyltransferase [Arabidopsis thaliana] gi|347662497|sp|Q9XEE9.2|ALG11_ARATH RecName: Full=GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase; AltName: Full=Alpha-1,2-mannosyltransferase ALG11; AltName: Full=Asparagine-linked glycosylation protein 11; AltName: Full=Protein LEAF WILTING 3 gi|330254700|gb|AEC09794.1| alpha-1,2-mannosyltransferase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 748 bits (1931), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/459 (76%), Positives = 400/459 (87%), Gaps = 1/459 (0%)
Query: 1 MAPYGILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKA 60
MA Y IL + ++T + A L L V NAR++R +V FFHP TNDGGGGERVLWCAVKA
Sbjct: 1 MAIYFIL-YTLLTIIFAVSLSLFLSVINARKSRKRAVGFFHPYTNDGGGGERVLWCAVKA 59
Query: 61 IQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFT 120
IQEE+PDLDC+++TGDHD+ DSL RAVDRFGV L PPKV+HL +RKWIEESTYP FT
Sbjct: 60 IQEENPDLDCVIFTGDHDSSSDSLARRAVDRFGVHLQSPPKVIHLNKRKWIEESTYPHFT 119
Query: 121 MIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISR 180
MIGQS GSVYL+WEAL FTPLY+ DTSGYAFTYPLARIFGC+V+CYTHYPTISLDMISR
Sbjct: 120 MIGQSLGSVYLAWEALRMFTPLYFLDTSGYAFTYPLARIFGCKVVCYTHYPTISLDMISR 179
Query: 181 VREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLW 240
VR+ +SMYNN+ASIA+SNWLS CK+VYY FSWMYG+VGSC LAMVNSSWT+SHIE LW
Sbjct: 180 VRQRNSMYNNDASIAKSNWLSTCKLVYYRAFSWMYGMVGSCTHLAMVNSSWTKSHIEVLW 239
Query: 241 GIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDA 300
IP+RI RVYPPCDTSGLQ PLERS++ P IISVAQFRPEKAH LQLEAFS+AL KLDA
Sbjct: 240 RIPERITRVYPPCDTSGLQAFPLERSSDPPKIISVAQFRPEKAHMLQLEAFSLALEKLDA 299
Query: 301 DLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGI 360
D+PRP+LQFVGSCRN SDEERLQ LKD+++ELKVDG+V+FYKN +YR+LV+LLG AV G+
Sbjct: 300 DVPRPKLQFVGSCRNNSDEERLQKLKDRAVELKVDGDVQFYKNAMYRELVELLGNAVAGL 359
Query: 361 HSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQNAEEYADAIVKI 420
H MIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQ+TGFLA+ EEYA+AI++I
Sbjct: 360 HGMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQKTGFLAETVEEYAEAILEI 419
Query: 421 ISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIRPIL 459
+ M ETERL+MA +AR+RAARFSEQRF EDFK AIRPI
Sbjct: 420 VKMNETERLKMAESARKRAARFSEQRFCEDFKTAIRPIF 458
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449460937|ref|XP_004148200.1| PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like [Cucumis sativus] gi|449507809|ref|XP_004163134.1| PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 745 bits (1923), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/459 (78%), Positives = 402/459 (87%)
Query: 6 ILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEES 65
+L WA IT +LA I +A + N RRNR +V FFHP TNDGGGGERVLWCAVKAIQ+E+
Sbjct: 5 LLFWAFITLLLALIRRIAWAILNGRRNRKPAVGFFHPYTNDGGGGERVLWCAVKAIQDEN 64
Query: 66 PDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQS 125
P+LDC+++TGDHDA P+SL+ARAVDRFGV+L PPKVVHL++RKWIEE+TYPRFTMIGQS
Sbjct: 65 PNLDCLIFTGDHDASPESLMARAVDRFGVKLHFPPKVVHLHKRKWIEETTYPRFTMIGQS 124
Query: 126 FGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGS 185
GS+YLSWEALC+FTPLYYFDTSGYAFTYP+AR+FGC V+CYTHYPTISLDM+SRVR S
Sbjct: 125 LGSIYLSWEALCRFTPLYYFDTSGYAFTYPIARLFGCIVVCYTHYPTISLDMLSRVRGRS 184
Query: 186 SMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDR 245
SMYNNNA IA+S+WLSQCKI+YY FSWMYG VGS LAMVNSSWTQSHI+ LW IPDR
Sbjct: 185 SMYNNNALIAKSSWLSQCKIIYYVLFSWMYGFVGSFTQLAMVNSSWTQSHIKSLWKIPDR 244
Query: 246 IKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRP 305
IKRVYPPCDTS LQ LPLERS + P IISVAQFRPEKAH LQLEAF+VA++KLDA RP
Sbjct: 245 IKRVYPPCDTSVLQALPLERSCKTPIIISVAQFRPEKAHLLQLEAFAVAIKKLDASSVRP 304
Query: 306 RLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMID 365
+LQFVGSCRNKSDEERLQ LK+K+IELKVD +VEF+KNL+YRDLV LL GAV GIHSM D
Sbjct: 305 KLQFVGSCRNKSDEERLQILKNKAIELKVDEHVEFHKNLMYRDLVGLLRGAVAGIHSMTD 364
Query: 366 EHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQNAEEYADAIVKIISMPE 425
EHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLA N EYADAI+ I+ MPE
Sbjct: 365 EHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLATNVYEYADAILHILRMPE 424
Query: 426 TERLEMAAAARRRAARFSEQRFYEDFKAAIRPILCHAAR 464
TERL+MAAAARRRA RFSE +FYEDFK AIRP+ +R
Sbjct: 425 TERLKMAAAARRRAERFSEDKFYEDFKTAIRPVFSLVSR 463
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|68160672|gb|AAY86782.1| glycosyl transferase family 1 protein [Noccaea caerulescens] | Back alignment and taxonomy information |
|---|
Score = 740 bits (1911), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/439 (78%), Positives = 388/439 (88%)
Query: 26 VHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLL 85
V NAR+ R +V FFHP TNDGGGGERVLWCAVKAIQEE+PDLDC+V+TGDHD+ DSL
Sbjct: 25 VINARKCRKRAVGFFHPYTNDGGGGERVLWCAVKAIQEETPDLDCVVFTGDHDSSSDSLA 84
Query: 86 ARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYF 145
RAVDRFGV LL PPKV+HL +RKWIEE TYP FTMIGQS GSVYL+WEAL KFTPLY+
Sbjct: 85 RRAVDRFGVHLLFPPKVIHLNKRKWIEERTYPHFTMIGQSLGSVYLAWEALRKFTPLYFL 144
Query: 146 DTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKI 205
DTSGYAFTYPLAR+FGC+V+CYTHYPTISLDMISRVR+ +SMYNN+ASIA+SNWLS CKI
Sbjct: 145 DTSGYAFTYPLARLFGCKVVCYTHYPTISLDMISRVRQRNSMYNNDASIAKSNWLSTCKI 204
Query: 206 VYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLER 265
VYY FSW+YG+VGSC +LAMVNSSWT+SHIE LW IP+R +RVYPPCDTSGLQ LPLER
Sbjct: 205 VYYRAFSWLYGMVGSCTNLAMVNSSWTKSHIEVLWRIPERTRRVYPPCDTSGLQALPLER 264
Query: 266 STEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSL 325
S++ P ISVAQFRPEKAH LQLEAFS+AL KLDAD PRP+LQFVGSCRN+SDEERLQ L
Sbjct: 265 SSDPPIFISVAQFRPEKAHMLQLEAFSLALEKLDADFPRPKLQFVGSCRNESDEERLQKL 324
Query: 326 KDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAH 385
KD+++ELKVDG+VEFYKN +YR+LV LLG AV GIH MIDEHFGISVVEYMAAGAIPIAH
Sbjct: 325 KDRAVELKVDGDVEFYKNAMYRELVALLGNAVAGIHGMIDEHFGISVVEYMAAGAIPIAH 384
Query: 386 NSAGPKMDIVLEEDGQQTGFLAQNAEEYADAIVKIISMPETERLEMAAAARRRAARFSEQ 445
NSAGPKMDIVLEEDGQ+TGFLA+ EEYA+AIV+I+ M ETERL+MA +AR+RA RFSEQ
Sbjct: 385 NSAGPKMDIVLEEDGQRTGFLAETVEEYAEAIVEIVKMNETERLKMAESARKRATRFSEQ 444
Query: 446 RFYEDFKAAIRPILCHAAR 464
RF EDFK AIRP+ A +
Sbjct: 445 RFCEDFKTAIRPVFTGALK 463
|
Source: Noccaea caerulescens Species: Noccaea caerulescens Genus: Noccaea Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356520284|ref|XP_003528793.1| PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 739 bits (1909), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/459 (77%), Positives = 402/459 (87%), Gaps = 3/459 (0%)
Query: 6 ILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEES 65
++I A+ITA+LA + I N RR R +VAFFHP TNDGGGGERVLWCAV+ IQEES
Sbjct: 1 MIITALITAILAGLCIGPI---NGRRRRKRAVAFFHPYTNDGGGGERVLWCAVRGIQEES 57
Query: 66 PDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQS 125
PDLDC VYTGDHDA P SL+ARA+DRFGV LL PPKVVHLY+RKWIEE+TYP FTMIGQS
Sbjct: 58 PDLDCYVYTGDHDATPQSLMARALDRFGVALLSPPKVVHLYKRKWIEETTYPHFTMIGQS 117
Query: 126 FGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGS 185
GSVYL+WEALCKFTP+YYFDTSGYAFTYPLAR+FGC+VICYTHYPTIS DM++RVR+ S
Sbjct: 118 LGSVYLAWEALCKFTPIYYFDTSGYAFTYPLARLFGCKVICYTHYPTISSDMLARVRQRS 177
Query: 186 SMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDR 245
MYNN+A I +S WLS+CKIVYYT FS +YG VGSCA LAMVNSSWT+SHIE LW PDR
Sbjct: 178 FMYNNDALITKSVWLSRCKIVYYTVFSCLYGFVGSCAHLAMVNSSWTKSHIENLWRFPDR 237
Query: 246 IKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRP 305
IKRVYPPCDTSGLQVLPLERS E P +ISVAQFRPEKAH LQLEAFS A+++LD LP+P
Sbjct: 238 IKRVYPPCDTSGLQVLPLERSAEIPVLISVAQFRPEKAHTLQLEAFSAAIKRLDPSLPKP 297
Query: 306 RLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMID 365
+ Q VGSCRNKSDE+RLQ LK+K+IEL V+ ++EF+KN+ YRDLV LLGGAV GIHSM D
Sbjct: 298 KFQIVGSCRNKSDEDRLQMLKEKAIELNVNEHMEFHKNVTYRDLVGLLGGAVAGIHSMTD 357
Query: 366 EHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQNAEEYADAIVKIISMPE 425
EHFGISVVEYMAAGAIPIAHNSAGPKMDIVL+E+GQQTGFLA + EEYADA+V+I+SMPE
Sbjct: 358 EHFGISVVEYMAAGAIPIAHNSAGPKMDIVLDEEGQQTGFLACSVEEYADAMVRIVSMPE 417
Query: 426 TERLEMAAAARRRAARFSEQRFYEDFKAAIRPILCHAAR 464
ERL+MAAAARRRA RFSEQRFY+DFKAA+ PILCH +R
Sbjct: 418 MERLKMAAAARRRAGRFSEQRFYDDFKAAVHPILCHISR 456
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297789912|ref|XP_002862877.1| glycosyl transferase family 1 protein [Arabidopsis lyrata subsp. lyrata] gi|297308639|gb|EFH39136.1| glycosyl transferase family 1 protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 737 bits (1902), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/453 (75%), Positives = 395/453 (87%)
Query: 7 LIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESP 66
+++ ++T + A L L+ V NAR++R +V FFHP TNDGGGGERVLWCAVKAIQEE+P
Sbjct: 6 ILYTLLTIIFAVSLSLSLSVINARKSRKRAVGFFHPYTNDGGGGERVLWCAVKAIQEENP 65
Query: 67 DLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSF 126
DLDC+++TGDHD+ DSL RAVDRFGV L PPKV++L +RKWIEE TYP FTMIGQS
Sbjct: 66 DLDCVIFTGDHDSSSDSLARRAVDRFGVHLQSPPKVIYLSKRKWIEERTYPHFTMIGQSL 125
Query: 127 GSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSS 186
GSVYL+WEAL KFTPLY+ DTSGYAFTYPLARIFGC+V+CYTHYPTISLDMISRVR+ +S
Sbjct: 126 GSVYLAWEALRKFTPLYFLDTSGYAFTYPLARIFGCKVVCYTHYPTISLDMISRVRQRNS 185
Query: 187 MYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRI 246
MYNN+ASIA+SNWLS CK+VYY FSWMYG+VGSC LAMVNSSWT+SHIE LW IP+RI
Sbjct: 186 MYNNDASIAKSNWLSTCKLVYYRAFSWMYGMVGSCTHLAMVNSSWTKSHIEVLWRIPERI 245
Query: 247 KRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPR 306
RVYPPCDTSGLQ PLERS++ P IISVAQFRPEKAH LQLE F++AL KLDAD+PRP+
Sbjct: 246 TRVYPPCDTSGLQAFPLERSSDPPKIISVAQFRPEKAHMLQLEIFALALEKLDADVPRPK 305
Query: 307 LQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDE 366
LQFVGSCRN SDEERLQ LKD+++ELKVDG+VEFYKN +YR+LV+LLG AV G+H MIDE
Sbjct: 306 LQFVGSCRNNSDEERLQKLKDRAVELKVDGDVEFYKNAMYRELVELLGNAVAGMHGMIDE 365
Query: 367 HFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQNAEEYADAIVKIISMPET 426
HFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQ+TGFLA+ EEYA+AI++I+ M E
Sbjct: 366 HFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQRTGFLAETVEEYAEAILEIVKMSEK 425
Query: 427 ERLEMAAAARRRAARFSEQRFYEDFKAAIRPIL 459
ER++MA +AR+RA RFSEQRF EDFK AI+PI
Sbjct: 426 ERIKMAESARKRAVRFSEQRFCEDFKTAIQPIF 458
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147866333|emb|CAN79918.1| hypothetical protein VITISV_005430 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 733 bits (1893), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/484 (74%), Positives = 402/484 (83%), Gaps = 25/484 (5%)
Query: 6 ILIWAVIT-AVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEE 64
+++W +I+ AV + ++ + R NR VAFFHP TNDGGGGERVLWCAVKAIQEE
Sbjct: 5 VVVWCLISGAVALILSXISLSIXKGRSNRRHGVAFFHPYTNDGGGGERVLWCAVKAIQEE 64
Query: 65 SPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQ 124
S DLDC+ YTGDHDA PDSL+ARAV RFGVELL+PPKVVHLY+RKWIEE+ YPRFTMIGQ
Sbjct: 65 SSDLDCVXYTGDHDASPDSLMARAVQRFGVELLYPPKVVHLYKRKWIEETMYPRFTMIGQ 124
Query: 125 SFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREG 184
S GSVYLSWEALCK+TPLYY DTSGYAFTYP+AR+FGC+VICYTHYPTISLDMISRV++
Sbjct: 125 SLGSVYLSWEALCKYTPLYYIDTSGYAFTYPVARLFGCKVICYTHYPTISLDMISRVQDQ 184
Query: 185 SSMYNNNASIAQ---------------------SNWLSQCKIVYYTFFSWMYGLVGSCAD 223
+SMYNN+A IA+ S WLS CK+ YY F WMYG VGS A
Sbjct: 185 NSMYNNDALIAKRHLVVYSSCLNVESHNFFNHGSTWLSLCKVXYYRLFGWMYGTVGSFAH 244
Query: 224 LAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQ---VLPLERSTEYPAIISVAQFRP 280
LAMVNSSWTQSHIE LW IP+R KRVYPPCDTSGLQ LPLER PAIISVAQFRP
Sbjct: 245 LAMVNSSWTQSHIESLWRIPERTKRVYPPCDTSGLQFKQALPLERXRSSPAIISVAQFRP 304
Query: 281 EKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEF 340
EKAH LQL AFSVA+R LDADLPRP+LQFVGSCRNKSDEERLQ+LKDK+I+LK++G+VEF
Sbjct: 305 EKAHTLQLMAFSVAIRNLDADLPRPKLQFVGSCRNKSDEERLQNLKDKAIQLKLEGDVEF 364
Query: 341 YKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDG 400
+KN++YRDLV LLGGAV GIH MIDEHFGISVVEYMAAGAIPIA+NSAGPKMDIVLEEDG
Sbjct: 365 HKNVMYRDLVGLLGGAVAGIHGMIDEHFGISVVEYMAAGAIPIANNSAGPKMDIVLEEDG 424
Query: 401 QQTGFLAQNAEEYADAIVKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIRPILC 460
QQTGFLAQ EEYADAI+KI+ MPET+RLEMAAAARRRA RFSEQRFYEDFKAA++
Sbjct: 425 QQTGFLAQTVEEYADAILKILRMPETKRLEMAAAARRRAGRFSEQRFYEDFKAALQAKYQ 484
Query: 461 HAAR 464
H +R
Sbjct: 485 HVSR 488
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356560288|ref|XP_003548425.1| PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 720 bits (1859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/437 (78%), Positives = 384/437 (87%)
Query: 28 NARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLAR 87
N RR R +V FFHP TNDGGGGERVLWCAV+ IQEESPDLDC VYTGDHDA P SL+AR
Sbjct: 24 NGRRRRKRAVGFFHPYTNDGGGGERVLWCAVRGIQEESPDLDCYVYTGDHDATPQSLMAR 83
Query: 88 AVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDT 147
A+DRFGV LL PKVV LY+RKWIEE+TYP FTMIGQS GSVYL+WEALCKFTP+YYFDT
Sbjct: 84 ALDRFGVTLLSSPKVVLLYKRKWIEETTYPHFTMIGQSLGSVYLAWEALCKFTPMYYFDT 143
Query: 148 SGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVY 207
SGYAFTYPLAR+FGC+VICYTHYPTIS DM++RVR+ S MYNN+A I +S WLS+CKIVY
Sbjct: 144 SGYAFTYPLARLFGCKVICYTHYPTISSDMLARVRQHSFMYNNDALITKSVWLSRCKIVY 203
Query: 208 YTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERST 267
YT FS +YG VGSCA LAMVNSSWT+SHIE LW PDRIKRVYPPCDTSGLQVLPLERS
Sbjct: 204 YTVFSCLYGFVGSCAHLAMVNSSWTKSHIENLWRFPDRIKRVYPPCDTSGLQVLPLERSA 263
Query: 268 EYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKD 327
E P +ISVAQFRPEKAH LQLEAFS A+++LD LP+P+ Q VGSCRNKSDE+RLQ LK+
Sbjct: 264 EIPVLISVAQFRPEKAHTLQLEAFSAAIKRLDPTLPKPKFQIVGSCRNKSDEDRLQMLKE 323
Query: 328 KSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNS 387
K+IEL V+ +VEF+KN+ YRDLV LLGGAV GIHSM DEHFGISVVEYMAAGAIPIAHNS
Sbjct: 324 KAIELNVNEHVEFHKNVTYRDLVGLLGGAVAGIHSMTDEHFGISVVEYMAAGAIPIAHNS 383
Query: 388 AGPKMDIVLEEDGQQTGFLAQNAEEYADAIVKIISMPETERLEMAAAARRRAARFSEQRF 447
AGPKMDIVL+EDGQQTGFLA EEYADA+V+I+SM E ERL+MAAAARR+A RFSEQRF
Sbjct: 384 AGPKMDIVLDEDGQQTGFLACTVEEYADAMVRIVSMSEMERLKMAAAARRQARRFSEQRF 443
Query: 448 YEDFKAAIRPILCHAAR 464
Y+DFKAA+RPIL H +R
Sbjct: 444 YDDFKAAVRPILSHTSR 460
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 464 | ||||||
| TAIR|locus:2065080 | 463 | LEW3 "LEAF WILTING 3" [Arabido | 0.984 | 0.987 | 0.751 | 1.3e-189 | |
| UNIPROTKB|E1BUY5 | 491 | ALG11 "Uncharacterized protein | 0.913 | 0.863 | 0.486 | 7.2e-107 | |
| UNIPROTKB|E1B756 | 500 | ALG11 "Uncharacterized protein | 0.926 | 0.86 | 0.462 | 5.3e-104 | |
| UNIPROTKB|E2RR35 | 667 | ALG11 "Uncharacterized protein | 0.971 | 0.676 | 0.449 | 1.1e-103 | |
| MGI|MGI:2142632 | 492 | Alg11 "asparagine-linked glyco | 0.980 | 0.924 | 0.438 | 2.6e-102 | |
| UNIPROTKB|Q2TAA5 | 492 | ALG11 "GDP-Man:Man(3)GlcNAc(2) | 0.969 | 0.914 | 0.446 | 5.4e-102 | |
| UNIPROTKB|F1RMC7 | 492 | ALG11 "Uncharacterized protein | 0.969 | 0.914 | 0.448 | 1.1e-101 | |
| RGD|1564725 | 492 | Alg11 "ALG11, alpha-1,2-mannos | 0.980 | 0.924 | 0.435 | 1.8e-101 | |
| FB|FBgn0037108 | 475 | CG11306 [Drosophila melanogast | 0.961 | 0.938 | 0.453 | 6.4e-99 | |
| ZFIN|ZDB-GENE-030131-7282 | 500 | alg11 "asparagine-linked glyco | 0.987 | 0.916 | 0.431 | 1e-98 |
| TAIR|locus:2065080 LEW3 "LEAF WILTING 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1838 (652.1 bits), Expect = 1.3e-189, P = 1.3e-189
Identities = 344/458 (75%), Positives = 391/458 (85%)
Query: 1 MAPYGILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKA 60
MA Y IL + ++T + A L L V NAR++R +V FFHP TNDGGGGERVLWCAVKA
Sbjct: 1 MAIYFIL-YTLLTIIFAVSLSLFLSVINARKSRKRAVGFFHPYTNDGGGGERVLWCAVKA 59
Query: 61 IQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFT 120
IQEE+PDLDC+++TGDHD+ DSL RAVDRFGV L PPKV+HL +RKWIEESTYP FT
Sbjct: 60 IQEENPDLDCVIFTGDHDSSSDSLARRAVDRFGVHLQSPPKVIHLNKRKWIEESTYPHFT 119
Query: 121 MIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISR 180
MIGQS GSVYL+WEAL FTPLY+ DTSGYAFTYPLARIFGC+V+CYTHYPTISLDMISR
Sbjct: 120 MIGQSLGSVYLAWEALRMFTPLYFLDTSGYAFTYPLARIFGCKVVCYTHYPTISLDMISR 179
Query: 181 VREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLW 240
VR+ +SMYNN+ASIA+SNWLS CK+VYY FSWMYG+VGSC LAMVNSSWT+SHIE LW
Sbjct: 180 VRQRNSMYNNDASIAKSNWLSTCKLVYYRAFSWMYGMVGSCTHLAMVNSSWTKSHIEVLW 239
Query: 241 GIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDA 300
IP+RI RVYPPCDTSGLQ PLERS++ P IISVAQFRPEKAH LQLEAFS+AL KLDA
Sbjct: 240 RIPERITRVYPPCDTSGLQAFPLERSSDPPKIISVAQFRPEKAHMLQLEAFSLALEKLDA 299
Query: 301 DLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGI 360
D+PRP+LQFVGSCRN SDEERLQ LKD+++ELKVDG+V+FYKN +YR+LV+LLG AV G+
Sbjct: 300 DVPRPKLQFVGSCRNNSDEERLQKLKDRAVELKVDGDVQFYKNAMYRELVELLGNAVAGL 359
Query: 361 HSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQNAEEYADAIVKI 420
H MIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQ+TGFLA+ EEYA+AI++I
Sbjct: 360 HGMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQKTGFLAETVEEYAEAILEI 419
Query: 421 ISMPETERLEMXXXXXXXXXXFSEQRFYEDFKAAIRPI 458
+ M ETERL+M FSEQRF EDFK AIRPI
Sbjct: 420 VKMNETERLKMAESARKRAARFSEQRFCEDFKTAIRPI 457
|
|
| UNIPROTKB|E1BUY5 ALG11 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 1057 (377.1 bits), Expect = 7.2e-107, P = 7.2e-107
Identities = 210/432 (48%), Positives = 279/432 (64%)
Query: 33 RTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRF 92
R VAFFHP N GGGGERVLWCA++ +Q++ ++ C+VYTGD DA + ++ A RF
Sbjct: 60 RPLLVAFFHPYCNAGGGGERVLWCAIRTLQKKYKNVTCVVYTGDRDATEEDIIEGAFRRF 119
Query: 93 GVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAF 152
++L HP K V L +R +E S YP FT++GQS GSV+L WEAL K P Y D+ GYAF
Sbjct: 120 NIKLTHPVKFVFLEKRYLVEASLYPHFTLLGQSLGSVFLGWEALLKCVPDIYIDSMGYAF 179
Query: 153 TYPLARIFG-CRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFF 211
T PL + G CRV CY HYPTIS DM+S VR + +NN A I + S+ K+VYY F
Sbjct: 180 TLPLFKYLGGCRVGCYVHYPTISTDMLSVVRNQDTRFNNAAFITNNPLFSKFKLVYYYLF 239
Query: 212 SWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLER---STE 268
++MYGLVGSC+D+ MVNSSWT +HI LW VYPPCD +PLE S E
Sbjct: 240 AFMYGLVGSCSDVVMVNSSWTLNHILSLWRAGPCTSVVYPPCDVQTFLDIPLEEEKNSAE 299
Query: 269 YPAIISVAQFRPEKAHPLQLEAFSVALR--KLDADLPRPRLQFVGSCRNKSDEERLQSLK 326
Y +I+S++QFRPEK HPLQ+ AF+ L+ +L L +L +G CRN+ DE+R+ +LK
Sbjct: 300 Y-SIVSISQFRPEKDHPLQIRAFAKLLKEKRLRQQLSL-KLILIGGCRNQQDEDRVNNLK 357
Query: 327 DKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHN 386
EL V NV F N+ + +L K L A +G+H+M +EHFGI VVE MAAG + +AHN
Sbjct: 358 SLCEELGVSNNVMFRINIPFEELKKHLAEATIGLHTMWNEHFGIGVVECMAAGTVILAHN 417
Query: 387 SAGPKMDIVLEEDGQQTGFLAQNAEEYADAIVKIISMPETERLEMXXXXXXXXXXFSEQR 446
S GPK+DIV+ +G+ TGFLA+N + YA+ + I SM +RLE+ FS+Q
Sbjct: 418 SGGPKLDIVVPYEGRITGFLAENEDSYAETMAYIFSMSPEKRLEIRESARQSVCRFSDQH 477
Query: 447 FYEDFKAAIRPI 458
F E F ++ P+
Sbjct: 478 FEETFLLSVEPL 489
|
|
| UNIPROTKB|E1B756 ALG11 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1030 (367.6 bits), Expect = 5.3e-104, P = 5.3e-104
Identities = 202/437 (46%), Positives = 284/437 (64%)
Query: 31 RNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVD 90
+N+T +AFFHP N GGGGERVLWCA++A+Q++ P+ +VYTGD D +L A
Sbjct: 61 KNQTV-IAFFHPYCNAGGGGERVLWCALRALQKKYPEALYVVYTGDADVSGQQILEGAFR 119
Query: 91 RFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGY 150
RF + L P K V L +R +E+S YP FT++GQS GS++L WEAL + P Y D+ GY
Sbjct: 120 RFNIRLTRPVKFVFLRKRYLVEDSLYPHFTLLGQSLGSIFLGWEALMQCVPDVYIDSMGY 179
Query: 151 AFTYPLARIFG-CRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYT 209
AFT PL + G CRV Y HYPTIS DM+S V+ + +NN A I ++ +LS+ K++YY
Sbjct: 180 AFTLPLFKYLGGCRVGSYVHYPTISTDMLSVVKNQNVGFNNAAFITRNPFLSKVKLIYYY 239
Query: 210 FFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL--ERST 267
F++MYGLVGSC+D+ MVNSSWT +HI LW + + VYPPCD LPL E++T
Sbjct: 240 LFAFMYGLVGSCSDIVMVNSSWTLNHILSLWKVGNCTNIVYPPCDVQTFLDLPLHEEKAT 299
Query: 268 EYPAIISVAQFRPEKAHPLQLEAFSVALRKLDAD-LPRPRLQFVGSCRNKSDEERLQSLK 326
++S+ QFRPEK HPLQ+ AF+ L K +++ LP +L +G CRN+ DE R+ L+
Sbjct: 300 SEHLLVSIGQFRPEKNHPLQIRAFAKLLNKKESESLPPLKLVLIGGCRNQDDELRVNQLR 359
Query: 327 DKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHN 386
+ +L V +VEF N+ + +L L A VG+H+M +EHFGI +VE MAAG I +AHN
Sbjct: 360 RLAEDLGVQEDVEFKINIPFDELKNYLSEATVGLHTMWNEHFGIGIVECMAAGMIVLAHN 419
Query: 387 SAGPKMDIVLEEDGQQTGFLAQNAEEYADAIVKIISMPETERLEMXXXXXXXXXXFSEQR 446
S GPK+DIV+ G++TGFLA++ E YA+ + I+SM +RL++ FS+Q
Sbjct: 420 SGGPKLDIVVPHHGERTGFLAESEEGYAETMAHILSMSAEQRLQIRNSARASVSRFSDQE 479
Query: 447 FYEDFKAAIRPIL--CH 461
F F +++ + CH
Sbjct: 480 FEVAFLSSVERLFQKCH 496
|
|
| UNIPROTKB|E2RR35 ALG11 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1027 (366.6 bits), Expect = 1.1e-103, P = 1.1e-103
Identities = 206/458 (44%), Positives = 290/458 (63%)
Query: 6 ILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEES 65
+++W I +L S N ++ T VAFFHP N GGGGERVLWCA++A+Q++
Sbjct: 212 VILWG-IRLLLQKKKESVSTSKNGKKQ--TVVAFFHPYCNAGGGGERVLWCALRALQKKY 268
Query: 66 PDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQS 125
P+ +VYTGD D +L A RF ++L HP K V L +R +E+S YP FT++GQS
Sbjct: 269 PEAVYVVYTGDVDVSGQQILEGAFQRFNIKLTHPVKFVFLRKRYLVEDSLYPHFTLLGQS 328
Query: 126 FGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFG-CRVICYTHYPTISLDMISRVREG 184
GS++L WEAL + P Y D+ GYAFT PL + G C V Y HYPTIS DM+S V+
Sbjct: 329 LGSIFLGWEALMQCVPDVYIDSMGYAFTLPLFKYLGGCHVGSYVHYPTISTDMLSVVKNQ 388
Query: 185 SSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPD 244
+ +NN A I ++ +LS+ K++YY F+++YGLVGSC+D+ MVNSSWT +HI LW + +
Sbjct: 389 NVGFNNAAFITRNPFLSKLKLIYYYLFAFIYGLVGSCSDVVMVNSSWTLNHILSLWKVGN 448
Query: 245 RIKRVYPPCDTSGLQVLPLERSTEYPA--IISVAQFRPEKAHPLQLEAFSVALRKLDAD- 301
VYPPCD +PL P ++SV QFRPEK HPLQ++AF+ L K A+
Sbjct: 449 CTNIVYPPCDVQTFLDIPLREKKTTPGHLLVSVGQFRPEKNHPLQIKAFAKLLNKKVAEP 508
Query: 302 LPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIH 361
LP +L +G CRN+ DE R+ L+ S +L + +VEF N+ + +L L A +G+H
Sbjct: 509 LPSLKLVLIGGCRNQDDELRVNQLRRLSEDLGIQEDVEFKINIPFDELKHYLSEATIGLH 568
Query: 362 SMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQNAEEYADAIVKII 421
+M +EHFGI VVE MAAG I +AHNS GPK+DIV+ + TGFLA++ E+YA+ +V I+
Sbjct: 569 TMWNEHFGIGVVECMAAGTIILAHNSGGPKLDIVVPHQREITGFLAESEEDYAETMVHIL 628
Query: 422 SMPETERLEMXXXXXXXXXXFSEQRFYEDFKAAIRPIL 459
SM E +RL++ FS+Q F F +++ +L
Sbjct: 629 SMSEEKRLQIRSNARASVSRFSDQEFELAFLSSVENLL 666
|
|
| MGI|MGI:2142632 Alg11 "asparagine-linked glycosylation 11 (alpha-1,2-mannosyltransferase)" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 1014 (362.0 bits), Expect = 2.6e-102, P = 2.6e-102
Identities = 205/468 (43%), Positives = 292/468 (62%)
Query: 5 GILIWAVITAVLA-SILILASHVHNARRNRTTS--------VAFFHPNTNDGGGGERVLW 55
G++I V+ L + ++ H+ +++ +TS VAFFHP N GGGGERVLW
Sbjct: 24 GLMICGVLCVYLVIGLWVIRWHLQRKKKSVSTSKNGKEQTVVAFFHPYCNAGGGGERVLW 83
Query: 56 CAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115
CA++A+Q++ P+ +VYTGD + +L A RF ++L HP + V L +R +E+S
Sbjct: 84 CALRALQKKYPEAVYVVYTGDINVSGQQILDGAFRRFNIKLAHPVQFVFLRKRYLVEDSR 143
Query: 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLAR-IFGCRVICYTHYPTIS 174
YP FT++GQS GS+ L WEAL + P Y D+ GYAFT PL + + GCRV Y HYPTIS
Sbjct: 144 YPHFTLLGQSLGSILLGWEALMQRVPDVYIDSMGYAFTLPLFKYVGGCRVGSYVHYPTIS 203
Query: 175 LDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQS 234
DM+S V+ + +NN A I+++ LS+ K++YY F+++YGLVGSC+D+ MVNSSWT +
Sbjct: 204 TDMLSVVKNQNPGFNNAAFISRNALLSKAKLIYYYLFAFVYGLVGSCSDIVMVNSSWTLN 263
Query: 235 HIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPA--IISVAQFRPEKAHPLQLEAFS 292
HI LW + VYPPCD +PL P ++S+ QFRPEK H LQ++AF+
Sbjct: 264 HILSLWKVGHCTNIVYPPCDVQTFLDIPLHEKKVTPGHLLVSIGQFRPEKNHALQIKAFA 323
Query: 293 VALRKLDADLPRP-RLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVK 351
L + A+L +L +G CRNK DE R+ L+ S L V NVEF N+ + +L
Sbjct: 324 KLLNEKAAELGHSLKLVLIGGCRNKDDEFRVNQLRSLSENLGVQENVEFKINISFDELKN 383
Query: 352 LLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQNAE 411
L A +G+H+M +EHFGI VVE MAAG + +AHNS GPK+DIV+ +GQ TGFLA++ E
Sbjct: 384 YLSEATIGLHTMWNEHFGIGVVECMAAGTVILAHNSGGPKLDIVIPHEGQITGFLAESEE 443
Query: 412 EYADAIVKIISMPETERLEMXXXXXXXXXXFSEQRFYEDFKAAIRPIL 459
YAD++ I+S+ ERL++ FS+Q F F ++ +L
Sbjct: 444 GYADSMAHILSLSAEERLQIRKNARASISRFSDQEFEVAFLCSMEKLL 491
|
|
| UNIPROTKB|Q2TAA5 ALG11 "GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1011 (360.9 bits), Expect = 5.4e-102, P = 5.4e-102
Identities = 204/457 (44%), Positives = 286/457 (62%)
Query: 6 ILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEES 65
I++W I +L L S N + +AFFHP N GGGGERVLWCA++A+Q++
Sbjct: 37 IVLWG-IRLLLQRKKKLVSTSKNGKNQMV--IAFFHPYCNAGGGGERVLWCALRALQKKY 93
Query: 66 PDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQS 125
P+ +VYTGD + +L A RF + L+HP + V L +R +E+S YP FT++GQS
Sbjct: 94 PEAVYVVYTGDVNVNGQQILEGAFRRFNIRLIHPVQFVFLRKRYLVEDSLYPHFTLLGQS 153
Query: 126 FGSVYLSWEALCKFTPLYYFDTSGYAFTYPLAR-IFGCRVICYTHYPTISLDMISRVREG 184
GS++L WEAL + P Y D+ GYAFT PL + I GC+V Y HYPTIS DM+S V+
Sbjct: 154 LGSIFLGWEALMQCVPDVYIDSMGYAFTLPLFKYIGGCQVGSYVHYPTISTDMLSVVKNQ 213
Query: 185 SSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPD 244
+ +NN A I ++ +LS+ K++YY F+++YGLVGSC+D+ MVNSSWT +HI LW + +
Sbjct: 214 NIGFNNAAFITRNPFLSKVKLIYYYLFAFIYGLVGSCSDVVMVNSSWTLNHILSLWKVGN 273
Query: 245 RIKRVYPPCDTSGLQVLPLERSTEYPA--IISVAQFRPEKAHPLQLEAFSVAL-RKLDAD 301
VYPPCD +PL P ++SV QFRPEK HPLQ+ AF+ L +K+
Sbjct: 274 CTNIVYPPCDVQTFLDIPLHEKKMTPGHLLVSVGQFRPEKNHPLQIRAFAKLLNKKMVES 333
Query: 302 LPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIH 361
P +L +G CRNK DE R+ L+ S +L V VEF N+ + +L L A +G+H
Sbjct: 334 PPSLKLVLIGGCRNKDDELRVNQLRRLSEDLGVQEYVEFKINIPFDELKNYLSEATIGLH 393
Query: 362 SMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQNAEEYADAIVKII 421
+M +EHFGI VVE MAAG I +AHNS GPK+DIV+ +G TGFLA++ E+YA+ I I+
Sbjct: 394 TMWNEHFGIGVVECMAAGTIILAHNSGGPKLDIVVPHEGDITGFLAESEEDYAETIAHIL 453
Query: 422 SMPETERLEMXXXXXXXXXXFSEQRFYEDFKAAIRPI 458
SM +RL++ FS+Q F F +++ +
Sbjct: 454 SMSAEKRLQIRKSARASVSRFSDQEFEVTFLSSVEKL 490
|
|
| UNIPROTKB|F1RMC7 ALG11 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 1008 (359.9 bits), Expect = 1.1e-101, P = 1.1e-101
Identities = 205/457 (44%), Positives = 282/457 (61%)
Query: 6 ILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEES 65
I++W I +L LAS + +AFFHP N GGGGERVLWCA++A+Q++
Sbjct: 37 IVLWG-IRLLLRQKKKLASTSKTGKSQMV--IAFFHPYCNAGGGGERVLWCALRALQKKY 93
Query: 66 PDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQS 125
P+ +VYTGD D +L A RF + L HP K + L +R +E S YP FT++GQS
Sbjct: 94 PEAVYVVYTGDADVSGQQILDGAFRRFNIRLTHPVKFLFLRKRYLVEASLYPHFTLLGQS 153
Query: 126 FGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFG-CRVICYTHYPTISLDMISRVREG 184
GS++L WEAL + P Y D+ GYAFT PL + G CRV Y HYPTIS DM+S V+
Sbjct: 154 LGSIFLGWEALMQCVPDIYIDSMGYAFTLPLFKYLGGCRVGSYVHYPTISTDMLSVVKNQ 213
Query: 185 SSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPD 244
+NN A I ++ +LSQ K++YY F+ +YGLVGSC+D+ MVNSSWT +HI LW D
Sbjct: 214 HVGFNNAAFITRNPFLSQVKLIYYHLFACVYGLVGSCSDVVMVNSSWTLNHILSLWKAGD 273
Query: 245 RIKRVYPPCDTSGLQVLPLE--RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADL 302
R VYPPCD +PL+ ++T ++S+ QFRPEK HPLQ+ AF+ L K +A
Sbjct: 274 RTHVVYPPCDVQTFLDIPLQDKKTTSGHMLVSIGQFRPEKNHPLQIRAFAKLLSKKEAAS 333
Query: 303 PRP-RLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIH 361
P +L +G CRN+ DE R+ L+ S +L V +VEF N+ + +L L A +G+H
Sbjct: 334 LLPLKLVLIGGCRNQDDELRVNQLRRLSEDLGVHKDVEFKINIPFDELKNYLSEATIGLH 393
Query: 362 SMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQNAEEYADAIVKII 421
+M +EHFGI +VE MAAG I +AHNS GPK+DIV+ +G TGFLA E YA+ + +I+
Sbjct: 394 TMWNEHFGIGIVECMAAGTIVLAHNSGGPKLDIVVPHEGACTGFLADGEEGYAETMAQIL 453
Query: 422 SMPETERLEMXXXXXXXXXXFSEQRFYEDFKAAIRPI 458
SM +RL + FS+Q F F +++ +
Sbjct: 454 SMSADKRLHIRNSARASVSRFSDQEFEVTFLSSVEKL 490
|
|
| RGD|1564725 Alg11 "ALG11, alpha-1,2-mannosyltransferase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1006 (359.2 bits), Expect = 1.8e-101, P = 1.8e-101
Identities = 204/468 (43%), Positives = 289/468 (61%)
Query: 5 GILIWAVITAVLA-SILILASHVHNARRNRTTS--------VAFFHPNTNDGGGGERVLW 55
G++I V+ L + ++ H+ +++ +TS VAFFHP N GGGGERVLW
Sbjct: 24 GLIICGVLCVYLVIGLWVIRRHLQRKKKSASTSKNGKDQMVVAFFHPYCNAGGGGERVLW 83
Query: 56 CAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115
CA++A+Q++ PD +VYTGD +L A RF ++L+HP + V L +R +E+S
Sbjct: 84 CALRALQKKYPDAVYVVYTGDIHVSGQQILEGAFRRFNIKLVHPVQFVFLRKRYLVEDSR 143
Query: 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLAR-IFGCRVICYTHYPTIS 174
YP FT++GQS GS+ L WEAL + P Y D+ GYAFT PL + + GCRV Y HYPTIS
Sbjct: 144 YPHFTLLGQSLGSILLGWEALMQRVPDVYIDSMGYAFTLPLFKYVGGCRVGSYVHYPTIS 203
Query: 175 LDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQS 234
DM+S V+ + +NN A I+++ LS+ K++YY F+++YGLVGSC+D+ MVNSSWT +
Sbjct: 204 TDMLSVVKNQNPGFNNAAFISRNALLSKAKLIYYYLFAFVYGLVGSCSDIVMVNSSWTLN 263
Query: 235 HIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPA--IISVAQFRPEKAHPLQLEAFS 292
HI LW + VYPPCD +PL P ++S+ QFRPEK H LQ++AF+
Sbjct: 264 HILSLWKVGHCTNIVYPPCDVQTFLDIPLHEKKVTPGHLLVSIGQFRPEKNHALQIKAFA 323
Query: 293 VALRKLDADLPRP-RLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVK 351
L + A+ +L +G CRNK DE R+ L+ S L V NVEF N+ + +L
Sbjct: 324 KLLNEKAAESRHSLKLVLIGGCRNKDDEFRVNQLRRLSENLGVQENVEFKINISFDELKN 383
Query: 352 LLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQNAE 411
L A +G+H+M +EHFGI VVE MAAG I +AHNS GPK+DIV+ +GQ TGFLA++ E
Sbjct: 384 YLSEATIGLHTMWNEHFGIGVVECMAAGTIILAHNSGGPKLDIVIPHEGQITGFLAESEE 443
Query: 412 EYADAIVKIISMPETERLEMXXXXXXXXXXFSEQRFYEDFKAAIRPIL 459
YA+ + I+S+ +RL + FS+Q F F ++ +L
Sbjct: 444 GYAETMAHILSLSPEKRLRIRETARASLSRFSDQEFEVAFLCSVGKLL 491
|
|
| FB|FBgn0037108 CG11306 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 982 (350.7 bits), Expect = 6.4e-99, P = 6.4e-99
Identities = 211/465 (45%), Positives = 291/465 (62%)
Query: 7 LIWAVITAVLASIL--ILASHVHNARRNR--TTS-----VAFFHPNTNDGGGGERVLWCA 57
L+W +++ VL ++L + R+N+ T+S V FHP N GGGGERVLWCA
Sbjct: 7 LLWLLLSLVLVAVLSFLFLRQWLLGRKNKLHTSSENGINVGIFHPYCNAGGGGERVLWCA 66
Query: 58 VKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVEL-LHPPKVVHLYRRKWIEESTY 116
V+A+QE+ + ++YTGD DA P+S+L +A + F + + K V L +R WIE Y
Sbjct: 67 VRALQEKYQNARMVIYTGDIDASPNSILQKAKNVFNIAVDSDNVKFVFLKQRHWIEAKNY 126
Query: 117 PRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFG-CRVICYTHYPTISL 175
P FT++GQS GS+ + EALC+F P Y DT GYAFTYPL R +V CY HYP IS
Sbjct: 127 PHFTLLGQSIGSMVVGLEALCRFPPDIYIDTMGYAFTYPLFRYLAQSKVGCYVHYPVIST 186
Query: 176 DMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSH 235
DM+ RV++ +NN +A++ +L+ K+ YY FS MY VG CA+ MVNSSWT++H
Sbjct: 187 DMLKRVQQRQMSHNNKKYVARNPFLTWTKLAYYRLFSRMYKWVGCCAETIMVNSSWTENH 246
Query: 236 IEKLWGIPDRIKRVYPPCDTSGLQVLP-LERSTEYPAIISVAQFRPEKAHPLQLEAFSVA 294
I +LW +P + RVYPPC+ S L+ L E+ E+ I+SV QFRPEK HPLQL+A
Sbjct: 247 ILQLWDVPFKTHRVYPPCEVSHLKSLQHTEKGDEF-IILSVGQFRPEKDHPLQLQAI-YE 304
Query: 295 LRKL----DADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLV 350
LR L +A + +L VGSCRN+ D ERL++++D + L ++ NV+F N+ Y DL+
Sbjct: 305 LRTLLAQDEALWNQIKLVIVGSCRNEDDYERLKNMQDLTKHLSLENNVQFSVNVPYEDLL 364
Query: 351 KLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQNA 410
KL A +GIH+M +EHFGI +VE MAAG I +AH S GP +DIV G Q GFLA +A
Sbjct: 365 KLYQTAHIGIHTMWNEHFGIGIVESMAAGLIMVAHKSGGPLLDIVETSAGSQNGFLATDA 424
Query: 411 EEYADAIVKIISMPETERLEMXXXXXXXXXXFSEQRFYEDFKAAI 455
EYA+ I+ II + +E + FSEQ F ++F A+
Sbjct: 425 VEYAENILNII-VNNSEMNGIRNAARASVERFSEQEFEKNFLRAV 468
|
|
| ZFIN|ZDB-GENE-030131-7282 alg11 "asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 980 (350.0 bits), Expect = 1.0e-98, P = 1.0e-98
Identities = 205/475 (43%), Positives = 281/475 (59%)
Query: 1 MAPYGILIWAVITAVLASILILASHVHNARRNRTT-----SVAFFHPNTNDGGGGERVLW 55
M P L + + T + I+ + S + R+ R +VAFFHP N GGGGERVLW
Sbjct: 22 MLPCFYLSFLLTTILFLFIMGVRSWLQMKRKTRRVQDGRPAVAFFHPYCNAGGGGERVLW 81
Query: 56 CAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115
CA++A+Q D+ +VYTGD + +L A RF + L P K V L R +E
Sbjct: 82 CALRALQNRYQDVSFVVYTGDQGVTAEEILDGARRRFNIRLPRPVKFVFLKHRLLVEAKL 141
Query: 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFG-CRVICYTHYPTIS 174
YP FT++GQS GS++L WEAL +F P Y D+ G+AFT P+ R G C+V Y HYPTIS
Sbjct: 142 YPHFTLLGQSVGSIFLGWEALTEFVPDLYIDSMGFAFTLPVFRYLGGCQVGSYVHYPTIS 201
Query: 175 LDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQS 234
DM+S VRE + +NN I+ + LS K++YY F+ +YGL GSC+D+ MVNS+WT
Sbjct: 202 TDMLSVVRERNPRFNNADYISSNPVLSAIKVIYYCVFALLYGLAGSCSDVIMVNSTWTLG 261
Query: 235 HIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYP------AIISVAQFRPEKAHPLQL 288
HI LW P+R VYPPCD +P+ E +++SV QFRPEK H LQ+
Sbjct: 262 HILALWRTPNRTSVVYPPCDVQAFLDVPIGEDNEEKEQKKCHSLVSVGQFRPEKDHQLQI 321
Query: 289 EAFSVALRKLDADLPRPR----LQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNL 344
AF L + + + P R L +G CRN+ DE+R+ L+ EL + VEF N+
Sbjct: 322 RAFKKLLDRKEVE-PAGREAVKLVLIGGCRNQEDEDRVLMLRGLCQELGIADRVEFKLNI 380
Query: 345 LYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTG 404
+++L K L A +G+H+M +EHFGI +VE MAAG I +AH S GPK+DIV+ DG TG
Sbjct: 381 PFQELKKDLTDATIGLHTMWNEHFGIGIVECMAAGTIILAHKSGGPKLDIVVPYDGGPTG 440
Query: 405 FLAQNAEEYADAIVKIISMPETERLEMXXXXXXXXXXFSEQRFYEDFKAAIRPIL 459
FLA + + YADA+ +I+SM RLEM FS+Q F F +A+ P++
Sbjct: 441 FLADDEDNYADAMERILSMSPATRLEMRRRARLSVSRFSDQEFEGSFLSAMEPLM 495
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q5R7Z6 | ALG11_PONAB | 2, ., 4, ., 1, ., 1, 3, 1 | 0.4541 | 0.9719 | 0.9166 | yes | no |
| P53993 | YMP8_CAEEL | 2, ., 4, ., -, ., - | 0.3870 | 0.9439 | 0.9319 | yes | no |
| Q54DM9 | ALG11_DICDI | 2, ., 4, ., 1, ., 1, 3, 1 | 0.4589 | 0.9137 | 0.8396 | yes | no |
| Q3TZM9 | ALG11_MOUSE | 2, ., 4, ., 1, ., 1, 3, 1 | 0.4444 | 0.9806 | 0.9247 | yes | no |
| Q6P312 | ALG11_XENTR | 2, ., 4, ., 1, ., 1, 3, 1 | 0.4666 | 0.9224 | 0.8788 | yes | no |
| Q7ZW24 | ALG11_DANRE | 2, ., 4, ., 1, ., 1, 3, 1 | 0.44 | 0.9870 | 0.916 | yes | no |
| O74878 | ALG11_SCHPO | 2, ., 4, ., 1, ., 1, 3, 1 | 0.4061 | 0.8771 | 0.8641 | yes | no |
| Q2TAA5 | ALG11_HUMAN | 2, ., 4, ., 1, ., 1, 3, 1 | 0.4519 | 0.9719 | 0.9166 | yes | no |
| Q9XEE9 | ALG11_ARATH | 2, ., 4, ., 1, ., 1, 3, 1 | 0.7647 | 0.9870 | 0.9892 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.4.1 | 0.691 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | eugene3.00120888 | transferase, transferring glycosyl groups (466 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | estExt_Genewise1_v1.C_LG_XIV2606 | SubName- Full=Putative uncharacterized protein; (424 aa) | • | • | • | 0.956 | |||||
 | eugene3.00110811 | hypothetical protein (413 aa) | • | • | • | • | 0.942 | ||||
 | eugene3.01460030 | transferase, transferring glycosyl groups (EC-2.4.1.142) (481 aa) | • | • | • | 0.494 | |||||
 | gw1.XIV.1495.1 | hypothetical protein (284 aa) | • | 0.403 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 464 | |||
| PLN02949 | 463 | PLN02949, PLN02949, transferase, transferring glyc | 0.0 | |
| cd03806 | 419 | cd03806, GT1_ALG11_like, This family is most close | 0.0 | |
| cd03801 | 374 | cd03801, GT1_YqgM_like, This family is most closel | 6e-25 | |
| COG0438 | 381 | COG0438, RfaG, Glycosyltransferase [Cell envelope | 5e-24 | |
| cd03805 | 392 | cd03805, GT1_ALG2_like, This family is most closel | 1e-23 | |
| pfam00534 | 158 | pfam00534, Glycos_transf_1, Glycosyl transferases | 2e-22 | |
| cd03804 | 351 | cd03804, GT1_wbaZ_like, This family is most closel | 2e-18 | |
| cd03808 | 359 | cd03808, GT1_cap1E_like, This family is most close | 1e-16 | |
| cd03799 | 355 | cd03799, GT1_amsK_like, This is a family of GT1 gl | 2e-15 | |
| cd03809 | 365 | cd03809, GT1_mtfB_like, This family is most closel | 2e-15 | |
| cd03798 | 377 | cd03798, GT1_wlbH_like, This family is most closel | 5e-14 | |
| cd03811 | 353 | cd03811, GT1_WabH_like, This family is most closel | 7e-12 | |
| cd03807 | 365 | cd03807, GT1_WbnK_like, This family is most closel | 9e-12 | |
| cd03820 | 348 | cd03820, GT1_amsD_like, This family is most closel | 1e-10 | |
| cd05844 | 367 | cd05844, GT1_like_7, Glycosyltransferases catalyze | 5e-10 | |
| cd03794 | 394 | cd03794, GT1_wbuB_like, This family is most closel | 2e-09 | |
| cd03800 | 398 | cd03800, GT1_Sucrose_synthase, This family is most | 2e-09 | |
| cd04949 | 372 | cd04949, GT1_gtfA_like, This family is most closel | 2e-09 | |
| cd03819 | 355 | cd03819, GT1_WavL_like, This family is most closel | 2e-09 | |
| cd04962 | 371 | cd04962, GT1_like_5, This family is most closely r | 4e-08 | |
| cd03792 | 372 | cd03792, GT1_Trehalose_phosphorylase, Trehalose ph | 6e-08 | |
| cd01635 | 229 | cd01635, Glycosyltransferase_GTB_type, Glycosyltra | 8e-08 | |
| cd03817 | 374 | cd03817, GT1_UGDG_like, This family is most closel | 9e-08 | |
| cd03814 | 364 | cd03814, GT1_like_2, This family is most closely r | 1e-07 | |
| cd04951 | 360 | cd04951, GT1_WbdM_like, This family is most closel | 2e-07 | |
| pfam13692 | 134 | pfam13692, Glyco_trans_1_4, Glycosyl transferases | 6e-07 | |
| cd03795 | 357 | cd03795, GT1_like_4, This family is most closely r | 8e-07 | |
| TIGR03999 | 374 | TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosamin | 8e-07 | |
| cd03802 | 335 | cd03802, GT1_AviGT4_like, This family is most clos | 2e-05 | |
| cd03825 | 365 | cd03825, GT1_wcfI_like, This family is most closel | 8e-05 | |
| pfam13524 | 92 | pfam13524, Glyco_trans_1_2, Glycosyl transferases | 5e-04 | |
| PLN02871 | 465 | PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoqu | 5e-04 | |
| TIGR03449 | 405 | TIGR03449, mycothiol_MshA, D-inositol-3-phosphate | 6e-04 | |
| cd04955 | 363 | cd04955, GT1_like_6, This family is most closely r | 0.002 | |
| cd03813 | 475 | cd03813, GT1_like_3, This family is most closely r | 0.004 |
| >gnl|CDD|215511 PLN02949, PLN02949, transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Score = 882 bits (2282), Expect = 0.0
Identities = 355/459 (77%), Positives = 408/459 (88%)
Query: 6 ILIWAVITAVLASILILASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEES 65
++++ ++T+++ ++ +A V ARR+R +V FFHP TNDGGGGERVLWCAV+AIQEE+
Sbjct: 5 LILYHLLTSIVLLLVAIALSVLRARRSRKRAVGFFHPYTNDGGGGERVLWCAVRAIQEEN 64
Query: 66 PDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQS 125
PDLDC++YTGDHDA PDSL ARA DRFGVELL PPKVVHL +RKWIEE TYPRFTMIGQS
Sbjct: 65 PDLDCVIYTGDHDASPDSLAARARDRFGVELLSPPKVVHLRKRKWIEEETYPRFTMIGQS 124
Query: 126 FGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGS 185
GSVYL+WEALCKFTPLY+FDTSGYAFTYPLAR+FGC+V+CYTHYPTIS DMISRVR+ S
Sbjct: 125 LGSVYLAWEALCKFTPLYFFDTSGYAFTYPLARLFGCKVVCYTHYPTISSDMISRVRDRS 184
Query: 186 SMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDR 245
SMYNN+ASIA+S WLS CKI+YY F+WMYGLVG CA LAMVNSSWT+SHIE LW IP+R
Sbjct: 185 SMYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVNSSWTKSHIEALWRIPER 244
Query: 246 IKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRP 305
IKRVYPPCDTSGLQ LPLERS + P IISVAQFRPEKAH LQLEAF++AL KLDAD+PRP
Sbjct: 245 IKRVYPPCDTSGLQALPLERSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRP 304
Query: 306 RLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMID 365
+LQFVGSCRNK DEERLQ LKD++ EL +DG+VEF+KN+ YRDLV+LLGGAV G+HSMID
Sbjct: 305 KLQFVGSCRNKEDEERLQKLKDRAKELGLDGDVEFHKNVSYRDLVRLLGGAVAGLHSMID 364
Query: 366 EHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQNAEEYADAIVKIISMPE 425
EHFGISVVEYMAAGA+PIAHNSAGPKMDIVL+EDGQQTGFLA EEYADAI++++ M E
Sbjct: 365 EHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLATTVEEYADAILEVLRMRE 424
Query: 426 TERLEMAAAARRRAARFSEQRFYEDFKAAIRPILCHAAR 464
TERLE+AAAAR+RA RFSEQRF EDFK AIRPIL A+R
Sbjct: 425 TERLEIAAAARKRANRFSEQRFNEDFKDAIRPILNSASR 463
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Length = 463 |
| >gnl|CDD|99978 cd03806, GT1_ALG11_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 616 bits (1591), Expect = 0.0
Identities = 213/417 (51%), Positives = 282/417 (67%), Gaps = 3/417 (0%)
Query: 37 VAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVEL 96
V FFHP N GGGGERVLWCAV+A+Q+ P+ ++YTGD DA P+ +L + RF +EL
Sbjct: 3 VGFFHPYCNAGGGGERVLWCAVRALQKRYPNNIVVIYTGDLDATPEEILEKVESRFNIEL 62
Query: 97 LHPPKVVHLYR-RKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP 155
P V L + RK +E STYPRFT++GQ+ GS+ L EAL K P + DT GY FTYP
Sbjct: 63 DRPRIVFFLLKYRKLVEASTYPRFTLLGQALGSMILGLEALLKLVPDIFIDTMGYPFTYP 122
Query: 156 LARIF-GCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWM 214
L R+ GC V Y HYPTIS DM+ +VR + YNN+A+IA+S LS+ K++YY F+++
Sbjct: 123 LVRLLGGCPVGAYVHYPTISTDMLQKVRSREASYNNSATIARSPVLSKAKLLYYRLFAFL 182
Query: 215 YGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIIS 274
YGL GS AD+ MVNS+WT++HI LW + VYPPCD L LPL+ T I+S
Sbjct: 183 YGLAGSFADVVMVNSTWTRNHIRSLWKRNTKPSIVYPPCDVEELLKLPLDEKTRENQILS 242
Query: 275 VAQFRPEKAHPLQLEAFSVALRKL-DADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELK 333
+AQFRPEK HPLQL AF+ L++L + + +L +GSCRN+ DE+R++ LK + EL
Sbjct: 243 IAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNEDDEKRVEDLKLLAKELG 302
Query: 334 VDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMD 393
++ VEF N + +L++ L A +G+H+M +EHFGI VVEYMAAG IP+AH S GP +D
Sbjct: 303 LEDKVEFVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLD 362
Query: 394 IVLEEDGQQTGFLAQNAEEYADAIVKIISMPETERLEMAAAARRRAARFSEQRFYED 450
IV+ DG TGFLA AEEYA+AI KI+S+ E ERL + AAR RFS++ F
Sbjct: 363 IVVPWDGGPTGFLASTAEEYAEAIEKILSLSEEERLRIRRAARSSVKRFSDEEFERK 419
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ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. Length = 419 |
| >gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Score = 105 bits (264), Expect = 6e-25
Identities = 70/260 (26%), Positives = 106/260 (40%), Gaps = 25/260 (9%)
Query: 207 YYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIP-DRIKRVYPPCDTSGLQVLPLER 265
+ AD + S T+ + +L G+P ++I + DT + P
Sbjct: 130 LLKLARALERRALRRADRIIAVSEATREELRELGGVPPEKITVIPNGVDTERFRPAPRAA 189
Query: 266 STEYPA------IISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDE 319
I+ V + P K L LEA KL + P RL VG D
Sbjct: 190 RRRLGIPEDEPVILFVGRLVPRKGVDLLLEAL----AKLRKEYPDVRLVIVG------DG 239
Query: 320 ERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAG 379
+ L+ + EL + V F + DL L A V + + E FG+ ++E MAAG
Sbjct: 240 PLREELEALAAELGLGDRVTFLGFVPDEDLPALYAAADVFVLPSLYEGFGLVLLEAMAAG 299
Query: 380 AIPIAHNSAGPKMDIVLEEDGQQTGFLAQ--NAEEYADAIVKIISMPETERLEMAAAAR- 436
+A + G ++V EDG +TG L + E A+AI++++ PE R + AAR
Sbjct: 300 LPVVASDVGGIP-EVV--EDG-ETGLLVPPGDPEALAEAILRLLDDPE-LRRRLGEAARE 354
Query: 437 RRAARFSEQRFYEDFKAAIR 456
R A RFS R +
Sbjct: 355 RVAERFSWDRVAARTEEVYY 374
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Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374 |
| >gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 103 bits (256), Expect = 5e-24
Identities = 65/258 (25%), Positives = 107/258 (41%), Gaps = 18/258 (6%)
Query: 206 VYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLER 265
+ + + AD + S + +E L G+P++I + DT +
Sbjct: 135 LLRLLLKRLKKALRLLADRVIAVSPALKELLEAL-GVPNKIVVIPNGIDTEKFAPARIGL 193
Query: 266 STEYPA--IISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQ 323
E ++ V + PEK L +EA KL P +L VG ER +
Sbjct: 194 LPEGGKFVVLYVGRLDPEKGLDLLIEAA----AKLKKRGPDIKLVIVGD-----GPERRE 244
Query: 324 SLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPI 383
L+ + +L ++ NV+F + +L +LL A V + + E FG+ ++E MAAG I
Sbjct: 245 ELEKLAKKLGLEDNVKFLGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAAGTPVI 304
Query: 384 AHNSAGPKMDIVLEEDGQQTGFLAQ--NAEEYADAIVKIISMPETERLEMAAAARRRAAR 441
A + G + + +TG L + EE ADA+ +++ PE AA R
Sbjct: 305 ASDVGGIPEVV----EDGETGLLVPPGDVEELADALEQLLEDPELREELGEAARERVEEE 360
Query: 442 FSEQRFYEDFKAAIRPIL 459
FS +R E +L
Sbjct: 361 FSWERIAEQLLELYEELL 378
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Length = 381 |
| >gnl|CDD|99977 cd03805, GT1_ALG2_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 1e-23
Identities = 119/438 (27%), Positives = 182/438 (41%), Gaps = 77/438 (17%)
Query: 36 SVAFFHPNTND-G-GGGERVLWCAVKAIQEESPDLDCIVYTGDHD---AFPDSLLARAVD 90
VAF HP D G GG ER++ A A+Q + +YT HD F + D
Sbjct: 2 RVAFIHP---DLGIGGAERLVVDAALALQSR--GHEVTIYTSHHDPSHCFEE-----TKD 51
Query: 91 -RFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLY-YFDTS 148
V + R W+ S + RF ++ +YL+ L Y F
Sbjct: 52 GTLPVRV----------RGDWLPRSIFGRFHILCAYLRMLYLALYLLLLPDEKYDVFIVD 101
Query: 149 GYAFTYPLARIF-GCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVY 207
+ PL ++F +++ Y H+P D + R L K +Y
Sbjct: 102 QVSACVPLLKLFSPSKILFYCHFP----DQLLAQRGS--------------LL---KRLY 140
Query: 208 YTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLW-GIPDRIKRV-YPPCDTS-------GL 258
F W+ AD +VNS++T S +K + + + V YP DT
Sbjct: 141 RKPFDWLEEFTTGMADKIVVNSNFTASVFKKTFPSLAKNPREVVYPCVDTDSFESTSEDP 200
Query: 259 QVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSD 318
L + +S+ +F +K L +EAF+ L+ A+ RL G +
Sbjct: 201 DPGLLIPKSGKKTFLSINRFERKKNIALAIEAFA-ILKDKLAEFKNVRLVIAGGYDPRVA 259
Query: 319 E-----ERLQSLKDKSIELKVDGNVEFYKNLLYRDLVK--LLGGAVVGIHSMIDEHFGIS 371
E E LQ L ++ L ++ V F ++ D K LL A +++ +EHFGI
Sbjct: 260 ENVEYLEELQRLAEE--LLLLEDQVIFLPSI--SDSQKELLLSSARALLYTPSNEHFGIV 315
Query: 372 VVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFL-AQNAEEYADAIVKIISMPETERLE 430
+E M AG IA NS GP +V DG +TGFL EE+A+A++K+ + P+
Sbjct: 316 PLEAMYAGKPVIACNSGGPLETVV---DG-ETGFLCEPTPEEFAEAMLKLANDPD-LADR 370
Query: 431 MAAAARRRA-ARFSEQRF 447
M AA R+R +FS + F
Sbjct: 371 MGAAGRKRVKEKFSTEAF 388
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ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. Length = 392 |
| >gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 93.1 bits (232), Expect = 2e-22
Identities = 55/169 (32%), Positives = 82/169 (48%), Gaps = 17/169 (10%)
Query: 272 IISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIE 331
I+ V + PEK L LEAF L P +L VG D E + LK +++
Sbjct: 5 ILFVGRLVPEKGLDLLLEAF----ALLKEQHPNLKLVIVG------DGEEEKKLKKLALK 54
Query: 332 LKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPK 391
L ++ NV F + DL++L A + + E FG+ ++E MAAG IA + GP
Sbjct: 55 LGLEDNVIFVGFVPDEDLIELYRIADLFVLPSRYEGFGLVLLEAMAAGVPVIATDVGGPA 114
Query: 392 MDIVLEEDGQQTGFLAQ--NAEEYADAIVKIISMPETERLEMAAAARRR 438
+IV + + TG L +AE A+AI K++ E R + AR+R
Sbjct: 115 -EIVKDGE---TGLLVDPGDAEALAEAIEKLLKDEEL-RERLGENARKR 158
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Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. Length = 158 |
| >gnl|CDD|99976 cd03804, GT1_wbaZ_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 85.7 bits (213), Expect = 2e-18
Identities = 63/238 (26%), Positives = 91/238 (38%), Gaps = 49/238 (20%)
Query: 223 DLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEK 282
D + NS + I+K +G + +YPP DT P E +Y +SV + P K
Sbjct: 155 DYFIANSRFVARRIKKYYGRDATV--IYPPVDTDRFT--PAEEKEDY--YLSVGRLVPYK 208
Query: 283 AHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIEL--KVDGNVEF 340
L +EAF+ L + RL +G + +RL++ ++ +V
Sbjct: 209 RIDLAIEAFN--------KLGK-RLVVIGDGP---ELDRLRAKAGPNVTFLGRVSDEE-- 254
Query: 341 YKNLLYRDLVKLLGGA----VVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVL 396
L L A E FGI VE MA+G IA+ G + V+
Sbjct: 255 --------LRDLYARARAFLFPAE-----EDFGIVPVEAMASGTPVIAYGKGGAL-ETVI 300
Query: 397 EEDGQQTGFL--AQNAEEYADAIVKIISMPETERLEMAAAARRRAARFSEQRFYEDFK 452
+ TG L Q E A A+ + E A R A RFSE RF E +
Sbjct: 301 DG---VTGILFEEQTVESLAAAVERF----EKNEDFDPQAIRAHAERFSESRFREKIR 351
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wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. Length = 351 |
| >gnl|CDD|99980 cd03808, GT1_cap1E_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 80.7 bits (200), Expect = 1e-16
Identities = 69/251 (27%), Positives = 99/251 (39%), Gaps = 33/251 (13%)
Query: 210 FFSWMYGLVGSCADLAMVNSSWTQSH-----IEKLWGIPDRIKRVYPP--CDTSGLQVLP 262
+ + L D Q+ KL I + + P D P
Sbjct: 127 LYLLLERLALRFTDKV-----IFQNEDDRDLALKLGIIKKKKTVLIPGSGVDLDRFSPSP 181
Query: 263 LERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERL 322
+ P + VA+ +K LEA R L A P RL VG +E
Sbjct: 182 EPIPEDDPVFLFVARLLKDKGIDELLEAA----RILKAKGPNVRLLLVGDG-----DEEN 232
Query: 323 QSLKDKSIELKVDGNVEFYKNLLYR-DLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAI 381
+ + +L ++G VEF L +R D+ +LL A V + E ++E MA G
Sbjct: 233 PAAILEIEKLGLEGRVEF---LGFRDDVPELLAAADVFVLPSYREGLPRVLLEAMAMGRP 289
Query: 382 PIAHNSAGPKMDIVLEEDGQQTGFL--AQNAEEYADAIVKIISMPETERLEMAAAARRRA 439
IA + G + + V DG GFL +AE ADAI ++I PE R M AAR+RA
Sbjct: 290 VIATDVPGCR-EAV--IDG-VNGFLVPPGDAEALADAIERLIEDPE-LRARMGQAARKRA 344
Query: 440 -ARFSEQRFYE 449
F E+ +
Sbjct: 345 EEEFDEEIVVK 355
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. Length = 359 |
| >gnl|CDD|99972 cd03799, GT1_amsK_like, This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Score = 77.2 bits (191), Expect = 2e-15
Identities = 67/253 (26%), Positives = 104/253 (41%), Gaps = 32/253 (12%)
Query: 206 VYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLE 264
++ + + + AD + S + + + +L G PD+I V+ D P
Sbjct: 115 IFRSPDAIDLDEKLARADFVVAISEYNRQQLIRLLGCDPDKIHVVHCGVDLERFPPRPPP 174
Query: 265 RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQS 324
E I+SV + +K LE AL L RL VG D
Sbjct: 175 PPGEPLRILSVGRLVEKKGLDYLLE----ALALLKDRGIDFRLDIVG------DGPLRDE 224
Query: 325 LKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIH-SMIDEHF---GISVV--EYMAA 378
L+ EL ++ V ++ +LL A + + S+ G+ VV E MA
Sbjct: 225 LEALIAELGLEDRVTLLGAKSQEEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAM 284
Query: 379 GAIP-IAHNSAG-PKMDIVLEEDGQQTGFLA--QNAEEYADAIVKIISMPETERLEMAAA 434
G +P I+ + +G P ++V EDG +TG L + E ADAI +++ PE R EM A
Sbjct: 285 G-LPVISTDVSGIP--ELV--EDG-ETGLLVPPGDPEALADAIERLLDDPE-LRREMGEA 337
Query: 435 ARRRAARFSEQRF 447
R R E+ F
Sbjct: 338 GRARV----EEEF 346
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. Length = 355 |
| >gnl|CDD|99981 cd03809, GT1_mtfB_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 77.0 bits (190), Expect = 2e-15
Identities = 85/410 (20%), Positives = 131/410 (31%), Gaps = 73/410 (17%)
Query: 47 GGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLY 106
G R ++A+ + P+ ++ G L A + ++ L
Sbjct: 14 PTGIGRYARELLRALLKLDPEEVLLLLPGAPGLLLLPLRAALRLLLRLPRRLLWGLLFLL 73
Query: 107 RRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVIC 166
R L + T PL R+ G V+
Sbjct: 74 RAGDRLLLLLLGL---------------------DLLHS----PHNTAPLLRLRGVPVV- 107
Query: 167 YTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAM 226
T + I L G + +F + AD +
Sbjct: 108 VTIHDLIPLRFPEYFSPG----------------------FRRYFRRLLRRALRRADAII 145
Query: 227 VNSSWTQSHIEKLWGIP-DRIKRVYPPCD------TSGLQVLPLERSTEYPAIISVAQFR 279
S T+ + + G+P D+I + D + +VL P + V
Sbjct: 146 TVSEATKRDLLRYLGVPPDKIVVIPLGVDPRFRPPPAEAEVLRALYLLPRPYFLYVGTIE 205
Query: 280 PEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVE 339
P K LEAF +L A P P+L VG R +EE L L+ EL + V
Sbjct: 206 PRKNLERLLEAF----ARLPAKGPDPKLVIVGK-RGWLNEELLARLR----ELGLGDRVR 256
Query: 340 FYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEED 399
F + +L L GA + + E FG+ V+E MA G IA N + L E
Sbjct: 257 FLGYVSDEELAALYRGARAFVFPSLYEGFGLPVLEAMACGTPVIASNIS------SLPEV 310
Query: 400 GQQTGFL--AQNAEEYADAIVKIISMPETERLEMAAAARRRAARFSEQRF 447
+ E A AI +++ P R E+ RA RFS ++
Sbjct: 311 AGDAALYFDPLDPEALAAAIERLLEDPA-LREELRERGLARAKRFSWEKT 359
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. Length = 365 |
| >gnl|CDD|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 73.2 bits (180), Expect = 5e-14
Identities = 62/322 (19%), Positives = 112/322 (34%), Gaps = 56/322 (17%)
Query: 144 YFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQC 203
+ G+A L R G ++ H GS +
Sbjct: 101 FAYPDGFAAAL-LKRKLGIPLVVTLH--------------GSDVNLL------------- 132
Query: 204 KIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL 263
+ AD + S ++ L P+++ + DT
Sbjct: 133 --PRKRLLRALLRRALRRADAVIAVSEALADELKALGIDPEKVTVIPNGVDTERFSPADR 190
Query: 264 ERSTEYPA------IISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKS 317
+ + I+ V + P K +EA + +L P L VG
Sbjct: 191 AEARKLGLPEDKKVILFVGRLVPRKGIDYLIEALA----RLLKKRPDVHLVIVG-----D 241
Query: 318 DEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMA 377
R ++L+ + EL ++ V F + + ++ A V + + E FG+ ++E MA
Sbjct: 242 GPLR-EALEALAAELGLEDRVTFLGAVPHEEVPAYYAAADVFVLPSLREGFGLVLLEAMA 300
Query: 378 AGAIP-IAHNSAGPKMDIVLEEDGQQTGFL--AQNAEEYADAIVKIISMPETERLEMAAA 434
G +P +A + G +I+ + + G L + E A+AI+++++ P AA
Sbjct: 301 CG-LPVVATDVGGIP-EIITDG---ENGLLVPPGDPEALAEAILRLLADPWLRL--GRAA 353
Query: 435 ARRRAARFSEQRFYEDFKAAIR 456
RR A RFS + E R
Sbjct: 354 RRRVAERFSWENVAERLLELYR 375
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. Length = 377 |
| >gnl|CDD|99982 cd03811, GT1_WabH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 66.2 bits (162), Expect = 7e-12
Identities = 57/283 (20%), Positives = 100/283 (35%), Gaps = 41/283 (14%)
Query: 185 SSMYNNNASIAQSNWLSQCKIVYY------------TFFSWMYGLVGSCADLAMVNSSWT 232
S + +A K++ + + + AD + S
Sbjct: 87 SHLTTTPNVLALLAARLGTKLIVWEHNSLSLELKRKLRLLLLIRKLYRRADKIVAVSEGV 146
Query: 233 QSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLERSTEYPA-----IISVAQFRPEKAHPL 286
+ + KL GI PD+I+ +Y P D ++ L E I++V + P+K
Sbjct: 147 KEDLLKLLGIPPDKIEVIYNPIDIEEIRALAEEPLELGIPPDGPVILAVGRLSPQKGFDT 206
Query: 287 QLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFY---KN 343
+ AF L + P RL +G + E L++L + EL + V F N
Sbjct: 207 LIRAF----ALLRKEGPDARLVILG---DGPLREELEAL---AKELGLADRVHFLGFQSN 256
Query: 344 LLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQT 403
L A + + S E F ++E MA G +A + GP+ +I+ + +
Sbjct: 257 PY-----PYLKAADLFVLSSRYEGFPNVLLEAMALGTPVVATDCPGPR-EIL---EDGEN 307
Query: 404 GFLAQNAEEYADA-IVKIISMPETERLEMAAAARRRAARFSEQ 445
G L +E A A + + A R + +
Sbjct: 308 GLLVPVGDEAALAAAALALLDLLLDPELRERLAAAARERVARE 350
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. Length = 353 |
| >gnl|CDD|99979 cd03807, GT1_WbnK_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 66.1 bits (162), Expect = 9e-12
Identities = 48/177 (27%), Positives = 74/177 (41%), Gaps = 21/177 (11%)
Query: 270 PAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKS 329
I VA+ P+K H L A ++ L+K P + + D L+ L K
Sbjct: 194 FLIGIVARLHPQKDHATLLRAAALLLKK------FPNARLLLVGDG-PDRANLELLALK- 245
Query: 330 IELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAG 389
EL ++ V D+ LL V + S + E F ++E MA G +P+ G
Sbjct: 246 -ELGLEDKVILLGER--SDVPALLNALDVFVLSSLSEGFPNVLLEAMACG-LPVVATDVG 301
Query: 390 PKMDIVLEEDGQQTGFL--AQNAEEYADAIVKIISMPETERLEMAAAARRRAA-RFS 443
++V + TGFL + E A+AI +++ P R + AAR R FS
Sbjct: 302 DNAELVGD-----TGFLVPPGDPEALAEAIEALLADPAL-RQALGEAARERIEENFS 352
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. Length = 365 |
| >gnl|CDD|99990 cd03820, GT1_amsD_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 62.2 bits (152), Expect = 1e-10
Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 30/183 (16%)
Query: 272 IISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIE 331
I++V + P+K L +EA++ K+ P +L+ VG ER ++L+ E
Sbjct: 181 ILAVGRLVPQKGFDLLIEAWA----KIAKKHPDWKLRIVGDG-----PER-EALEALIKE 230
Query: 332 LKVDGNVEFY---KNL--LYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHN 386
L ++ V KN+ Y ++ + S E F + ++E MA G I+ +
Sbjct: 231 LGLEDRVILLGFTKNIEEYYAK------ASIFVLTSRF-EGFPMVLLEAMAFGLPVISFD 283
Query: 387 -SAGPKMDIVLEEDGQQTGFL--AQNAEEYADAIVKIISMPETERLEMAAAARRRAARFS 443
GP +I+ + G L + E A+A+++++ E R M A AR A RFS
Sbjct: 284 CPTGPS-EII---EDGVNGLLVPNGDVEALAEALLRLMEDEE-LRKRMGANARESAERFS 338
Query: 444 EQR 446
+
Sbjct: 339 IEN 341
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. Length = 348 |
| >gnl|CDD|100003 cd05844, GT1_like_7, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 60.7 bits (148), Expect = 5e-10
Identities = 56/214 (26%), Positives = 93/214 (43%), Gaps = 28/214 (13%)
Query: 243 PDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADL 302
P+++ DT+ P + P I+ V +F +K L LEAF+ R+ +
Sbjct: 164 PEKVHVHPIGVDTAKFT--PATPARRPPRILFVGRFVEKKGPLLLLEAFARLARR----V 217
Query: 303 PRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGA-VVGIH 361
P RL +G D L +L+ + L + G V F + ++ +L+ A +
Sbjct: 218 PEVRLVIIG------DGPLLAALEALARALGLGGRVTFLGAQPHAEVRELMRRARIFLQP 271
Query: 362 SMID-----EHFGISVVEYMAAGAIPIAHNSAG-PKMDIVLEEDGQQTGFLAQ--NAEEY 413
S+ E + ++E A+G +A G P + V EDG +TG L +
Sbjct: 272 SVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIP--EAV--EDG-ETGLLVPEGDVAAL 326
Query: 414 ADAIVKIISMPETERLEMAAAARRRA-ARFSEQR 446
A A+ ++++ P R M AA RRR RF +R
Sbjct: 327 AAALGRLLADP-DLRARMGAAGRRRVEERFDLRR 359
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 367 |
| >gnl|CDD|99968 cd03794, GT1_wbuB_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 59.2 bits (144), Expect = 2e-09
Identities = 47/166 (28%), Positives = 69/166 (41%), Gaps = 21/166 (12%)
Query: 294 ALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLL 353
A L D P R VG D + LK+ + L +D NV F + +L +LL
Sbjct: 241 AAALL-KDRPDIRFLIVG------DGPEKEELKELAKALGLD-NVTFLGRVPKEELPELL 292
Query: 354 GGAVVGIHSMIDEH-FGISV----VEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFL-- 406
A VG+ + F EYMAAG P+ S + ++EE G G +
Sbjct: 293 AAADVGLVPLKPGPAFEGVSPSKLFEYMAAG-KPVLA-SVDGESAELVEEAG--AGLVVP 348
Query: 407 AQNAEEYADAIVKIISMPETERLEMAAAARRRA-ARFSEQRFYEDF 451
+ E A AI++++ ER EM RR +FS ++ E
Sbjct: 349 PGDPEALAAAILELL-DDPEERAEMGENGRRYVEEKFSREKLAERL 393
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. Length = 394 |
| >gnl|CDD|99973 cd03800, GT1_Sucrose_synthase, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 59.1 bits (144), Expect = 2e-09
Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 18/202 (8%)
Query: 248 RVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRL 307
+ P + + L R + P I++V + P K + A++ L +L R L
Sbjct: 199 ERFTPYGRAEARRARLLRDPDKPRILAVGRLDPRKGIDTLIRAYA-ELPELRE---RANL 254
Query: 308 QFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKL--LGGAVVGI-HSMI 364
VG R+ + L++ + EL V V+F + DL L V
Sbjct: 255 VIVGGPRDDILAMDEEELRELARELGVIDRVDFPGRVSREDLPALYRAADVFVNPALY-- 312
Query: 365 DEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLA--QNAEEYADAIVKIIS 422
E FG++ +E MA G +A GP+ DIV DG TG L ++ E A A+ ++++
Sbjct: 313 -EPFGLTALEAMACGLPVVATAVGGPR-DIV--VDGV-TGLLVDPRDPEALAAALRRLLT 367
Query: 423 MPETERLEMAAAARRR-AARFS 443
P R ++ A RR AR++
Sbjct: 368 DPAL-RRRLSRAGLRRARARYT 388
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. Length = 398 |
| >gnl|CDD|99998 cd04949, GT1_gtfA_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Score = 58.4 bits (142), Expect = 2e-09
Identities = 50/181 (27%), Positives = 95/181 (52%), Gaps = 20/181 (11%)
Query: 272 IISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIE 331
II+VA+ PEK ++AF+ +++ +P L G +EE+L+ L + E
Sbjct: 207 IITVARLAPEKQLDQLIKAFAKVVKQ----VPDATLDIYGY---GDEEEKLKELIE---E 256
Query: 332 LKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSA-GP 390
L ++ V RDL ++ A + + + E FG+S++E ++ G I+++ GP
Sbjct: 257 LGLEDYVFL--KGYTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGP 314
Query: 391 KMDIVLEEDGQQTGFLA--QNAEEYADAIVKIISMPETERLEMAAAARRRAARFSEQRFY 448
+I+ EDG + G+L + E A+AI+++++ P+ + + AA A R+SE+ +
Sbjct: 315 -SEII--EDG-ENGYLVPKGDIEALAEAIIELLNDPKL-LQKFSEAAYENAERYSEENVW 369
Query: 449 E 449
E
Sbjct: 370 E 370
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 372 |
| >gnl|CDD|99989 cd03819, GT1_WavL_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 58.4 bits (142), Expect = 2e-09
Identities = 64/255 (25%), Positives = 98/255 (38%), Gaps = 33/255 (12%)
Query: 211 FSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVY--------PPCDTSGLQVL 261
++ Y + + D + S++ HI + +G+ PDRI+ + P ++L
Sbjct: 114 VNFRYNAIMARGDRVIAVSNFIADHIRENYGVDPDRIRVIPRGVDLDRFDPGAVPPERIL 173
Query: 262 PLER----STEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKS 317
L R P I+ + K E F AL +L D P L VG + +
Sbjct: 174 ALAREWPLPKGKPVILLPGRLTRWKGQ----EVFIEALARLKKDDPDVHLLIVGDAQGRR 229
Query: 318 DEERLQSLKDKSIELKVDGNVEFYKNLLYR-DLVKLLGGA--VVGIHSMIDEHFGISVVE 374
L + L + V F + + D+ A VV S E FG + VE
Sbjct: 230 F--YYAELLELIKRLGLQDRVTF---VGHCSDMPAAYALADIVVSA-STEPEAFGRTAVE 283
Query: 375 YMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ--NAEEYADAIVKIISMPETERLEMA 432
A G IA + G + V +TG L +AE A A+ +I+S+ R +M
Sbjct: 284 AQAMGRPVIASDHGGA-RETVRPG---ETGLLVPPGDAEALAQALDQILSLLPEGRAKMF 339
Query: 433 AAARRRAA-RFSEQR 446
A AR FS R
Sbjct: 340 AKARMCVETLFSYDR 354
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. Length = 355 |
| >gnl|CDD|100002 cd04962, GT1_like_5, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 54.6 bits (132), Expect = 4e-08
Identities = 53/187 (28%), Positives = 86/187 (45%), Gaps = 26/187 (13%)
Query: 272 IISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIE 331
+I ++ FRP K + F+ +++ A RL VG +S ERL + E
Sbjct: 200 LIHISNFRPVKRIDDVIRIFAKVRKEVPA-----RLLLVGDGPERSPAERL------ARE 248
Query: 332 LKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAG-P 390
L + +V F + +LL A + + E FG++ +E MA G +A N+ G P
Sbjct: 249 LGLQDDVLFLGKQ--DHVEELLSIADLFLLPSEKESFGLAALEAMACGVPVVASNAGGIP 306
Query: 391 KMDIVLEEDGQQTGFLAQ--NAEEYADAIVKIISMPETERLEMAAAARRRAA-RFSEQRF 447
+ + + G +TGFL + E A+ + ++ E + E + AAR RAA RF +R
Sbjct: 307 E----VVKHG-ETGFLVDVGDVEAMAEYALSLLEDDELWQ-EFSRAARNRAAERFDSERI 360
Query: 448 ---YEDF 451
YE
Sbjct: 361 VPQYEAL 367
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 371 |
| >gnl|CDD|99966 cd03792, GT1_Trehalose_phosphorylase, Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Score = 54.1 bits (131), Expect = 6e-08
Identities = 57/201 (28%), Positives = 82/201 (40%), Gaps = 29/201 (14%)
Query: 248 RVYPPCDTSGLQVLPLERS---TEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPR 304
R P D + LE+ E P I V++F P K ++A+ RK+ +P
Sbjct: 170 RELSPADIEYI----LEKYGIDPERPYITQVSRFDPWKDPFGVIDAY----RKVKERVPD 221
Query: 305 PRLQFVGSCRNKSDE-----ERLQSLKDKSIELKVDGNVEFYKNLLYRDLV--KLLGGAV 357
P+L VGS E E + + D ++ DL L +
Sbjct: 222 PQLVLVGSGATDDPEGWIVYEEVLEYAE------GDPDIHVLTLPPVSDLEVNALQRAST 275
Query: 358 VGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQNAEEYADAI 417
V + I E FG++V E + G IA G + I EDG +TGFL EE A I
Sbjct: 276 VVLQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQI---EDG-ETGFLVDTVEEAAVRI 331
Query: 418 VKIISMPETERLEMAAAARRR 438
+ ++ PE R +M A AR
Sbjct: 332 LYLLRDPE-LRRKMGANAREH 351
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. Length = 372 |
| >gnl|CDD|99959 cd01635, Glycosyltransferase_GTB_type, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 52.6 bits (126), Expect = 8e-08
Identities = 37/140 (26%), Positives = 54/140 (38%), Gaps = 11/140 (7%)
Query: 262 PLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEER 321
L S + V + PEK +EAF+ L P +L G D
Sbjct: 97 LLALSIGLADKVFVGRLAPEKGLDDLIEAFA----LLKERGPDLKLVIAG------DGPE 146
Query: 322 LQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAV-VGIHSMIDEHFGISVVEYMAAGA 380
+ L++ L + V F L +L+ LL A V + + E FG+ V+E MA G
Sbjct: 147 REYLEELLAALLLLDRVIFLGGLDPEELLALLLAAADVFVLPSLREGFGLVVLEAMACGL 206
Query: 381 IPIAHNSAGPKMDIVLEEDG 400
IA + GP + G
Sbjct: 207 PVIATDVGGPPEIVEDGLTG 226
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 229 |
| >gnl|CDD|99987 cd03817, GT1_UGDG_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 53.8 bits (130), Expect = 9e-08
Identities = 45/183 (24%), Positives = 82/183 (44%), Gaps = 16/183 (8%)
Query: 270 PAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKS 329
P ++ V + EK ++ A +L + P +L VG D + L++ +
Sbjct: 203 PVLLYVGRLAKEK----NIDFLIRAFARLLKEEPDVKLVIVG------DGPEREELEELA 252
Query: 330 IELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAG 389
EL + V F + +L A + + + E G+ ++E MAAG +A ++ G
Sbjct: 253 RELGLADRVIFTGFVPREELPDYYKAADLFVFASTTETQGLVLLEAMAAGLPVVAVDAPG 312
Query: 390 PKMDIVLEEDGQQTGFLAQNAEEY-ADAIVKIISMPETERLEMAAAARRRAARFSEQRFY 448
D+V DG + GFL +E A+A+++++ PE R ++ A A +FS +
Sbjct: 313 LP-DLV--ADG-ENGFLFPPGDEALAEALLRLLQDPELRR-RLSKNAEESAEKFSFAKKV 367
Query: 449 EDF 451
E
Sbjct: 368 EKL 370
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. Length = 374 |
| >gnl|CDD|99985 cd03814, GT1_like_2, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 53.0 bits (128), Expect = 1e-07
Identities = 59/185 (31%), Positives = 82/185 (44%), Gaps = 26/185 (14%)
Query: 270 PAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKS 329
P ++ V + PEK LEA A L P RL VG RL+
Sbjct: 198 PVLLYVGRLAPEK----NLEALLDADLPL-RRRPPVRLVIVGDGP---ARARLE------ 243
Query: 330 IELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIP-IAHNSA 388
NV F L +L A V + E FG+ V+E MA+G +P +A ++
Sbjct: 244 ---ARYPNVHFLGFLDGEELAAAYASADVFVFPSRTETFGLVVLEAMASG-LPVVAPDAG 299
Query: 389 GPKMDIVLEEDGQQTGFLA--QNAEEYADAIVKIISMPETERLEMAAAARRRAARFSEQR 446
GP DIV DG+ G L +AE +A A+ +++ PE R MAA AR A R S +
Sbjct: 300 GPA-DIV--TDGE-NGLLVEPGDAEAFAAALAALLADPE-LRRRMAARARAEAERRSWEA 354
Query: 447 FYEDF 451
F ++
Sbjct: 355 FLDNL 359
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 364 |
| >gnl|CDD|100000 cd04951, GT1_WbdM_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Score = 52.7 bits (127), Expect = 2e-07
Identities = 41/174 (23%), Positives = 70/174 (40%), Gaps = 20/174 (11%)
Query: 272 IISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIE 331
I++V + K +P L+AF+ KL +D +L G D +L+
Sbjct: 191 ILAVGRLVEAKDYPNLLKAFA----KLLSDYLDIKLLIAG------DGPLRATLERLIKA 240
Query: 332 LKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPK 391
L + V+ D+ A + + S E FG+ V E MA +A ++ G +
Sbjct: 241 LGLSNRVKLLGL--RDDIAAYYNAADLFVLSSAWEGFGLVVAEAMACELPVVATDAGGVR 298
Query: 392 MDIVLEEDGQQTGFL--AQNAEEYADAIVKIISMPETERLEMAAAARRRAARFS 443
V+ + G + + E A+ I +I+ M ER + A R +FS
Sbjct: 299 E--VVGDSG----LIVPISDPEALANKIDEILKMSGEERDIIGARRERIVKKFS 346
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 360 |
| >gnl|CDD|222322 pfam13692, Glyco_trans_1_4, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 48.1 bits (115), Expect = 6e-07
Identities = 35/136 (25%), Positives = 54/136 (39%), Gaps = 21/136 (15%)
Query: 288 LEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYR 347
L AL L LP L +GS E L L NV F +
Sbjct: 18 LWLLEEALPLLRKALPDVELHIIGSGP-----EELARLAP---------NVHFLGFV--E 61
Query: 348 DLVKLLGGAVVGIHSM-IDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFL 406
DL LL A V + + + ++E +AAG +A + + ED +
Sbjct: 62 DLAALLASADVALAPLRFGAGSPLKLLEALAAGLPVVATDIGAEGL----PEDLGWGVLV 117
Query: 407 AQNAEEYADAIVKIIS 422
A + EE+A+AIV++++
Sbjct: 118 ADDPEEFAEAIVRLLA 133
|
Length = 134 |
| >gnl|CDD|99969 cd03795, GT1_like_4, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 50.7 bits (122), Expect = 8e-07
Identities = 40/153 (26%), Positives = 59/153 (38%), Gaps = 15/153 (9%)
Query: 300 ADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVG 359
A LP L VG E L+ + L + V F L + LL V
Sbjct: 214 AALPDAPLVIVGE----GPLEA--ELEALAAALGLLDRVRFLGRLDDEEKAALLAACDVF 267
Query: 360 IHSMID--EHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFL--AQNAEEYAD 415
+ ++ E FGI ++E MA G I+ + L TG + + A+
Sbjct: 268 VFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNLHG---VTGLVVPPGDPAALAE 324
Query: 416 AIVKIISMPETERLEMAAAARRRA-ARFSEQRF 447
AI +++ PE R + AAR RA F+ R
Sbjct: 325 AIRRLLEDPEL-RERLGEAARERAEEEFTADRM 356
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 357 |
| >gnl|CDD|234438 TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA | Back alignment and domain information |
|---|
Score = 50.7 bits (122), Expect = 8e-07
Identities = 52/187 (27%), Positives = 84/187 (44%), Gaps = 26/187 (13%)
Query: 272 IISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIE 331
+I ++ FRP K +E F+ +++ A +L VG +S E+L E
Sbjct: 202 LIHISNFRPVKRVEDVIEVFARVQQEVPA-----KLLLVGDGPERSPAEQLVR------E 250
Query: 332 LKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAG-P 390
L + V F D+ +LL + + + E FG++ +E MA G IA N+ G P
Sbjct: 251 LGLTDRVLFLGKQD--DVAELLSISDLFLLPSEKESFGLAALEAMACGVPVIASNAGGIP 308
Query: 391 KMDIVLEEDGQQTGFLAQ--NAEEYADAIVKIISMPETERLEMAAAARRRAA-RFSEQRF 447
+ + E G TGFL + E A+ + ++ E + +AAAR RA RF ++
Sbjct: 309 E----VVEHG-VTGFLCDVGDVETMAEYAISLLEDEELLQ-RFSAAARERAKERFDSEKI 362
Query: 448 ---YEDF 451
YE
Sbjct: 363 VPQYEAL 369
|
Members of this protein family are BshA, a glycosyltransferase required for bacillithiol biosynthesis. This enzyme combines UDP-GlcNAc and L-malate to form N-acetyl-alpha-D-glucosaminyl L-malate synthase. Bacillithiol is a low-molecular-weight thiol, an analog of glutathione and mycothiol, and is found largely in the Firmicutes [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs]. Length = 374 |
| >gnl|CDD|99975 cd03802, GT1_AviGT4_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 46.1 bits (110), Expect = 2e-05
Identities = 41/128 (32%), Positives = 58/128 (45%), Gaps = 20/128 (15%)
Query: 330 IELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMI--DEHFGISVVEYMAAGAIPIAHNS 387
EL ++E+ + + +LLG A + I +E FG+ ++E MA G IA
Sbjct: 218 PELLDGPDIEYLGEVGGAEKAELLGNARALLFP-ILWEEPFGLVMIEAMACGTPVIAFRR 276
Query: 388 AG-PKMDIVLEEDGQQTGFLAQNAEEYADAIVKIISMPETERLEMAAAARRRA-ARFSEQ 445
P ++V EDG TGFL + EE A A+ + + AA RRRA RFS
Sbjct: 277 GAVP--EVV--EDG-VTGFLVDSVEELAAAVARADRLDR-------AACRRRAERRFSAA 324
Query: 446 RF---YED 450
R Y
Sbjct: 325 RMVDDYLA 332
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. Length = 335 |
| >gnl|CDD|99994 cd03825, GT1_wcfI_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 8e-05
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 366 EHFGISVVEYMAAGAIP-IAHNSAGPKMDIVLEEDGQQTGFLAQ--NAEEYADAIVKIIS 422
E+F + +E +A G P +A + G DIV D TG+LA+ + E+ A+ I +++
Sbjct: 275 ENFPNTAIEALACG-TPVVAFDVGGIP-DIV---DHGVTGYLAKPGDPEDLAEGIEWLLA 329
Query: 423 MPETERLEMAAAARRRA-ARFSEQR 446
P+ ER E+ AAR A F +
Sbjct: 330 DPD-EREELGEAARELAENEFDSRV 353
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. Length = 365 |
| >gnl|CDD|222197 pfam13524, Glyco_trans_1_2, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 38.7 bits (91), Expect = 5e-04
Identities = 22/97 (22%), Positives = 43/97 (44%), Gaps = 6/97 (6%)
Query: 358 VGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQNAEEYADAI 417
+ ++ + + V E A GA + + G ++ + E + L ++ EE A+ +
Sbjct: 1 IVLNPSRRDSPNMRVFEAAACGAPLLTDRTPG--LEELFEPG--EEIVLYRDPEELAEKL 56
Query: 418 VKIISMPETERLEMAAAARRRA-ARFSEQRFYEDFKA 453
+++ PE ER +AAA R R A + + E
Sbjct: 57 RYLLADPE-ERRAIAAAGRERVLAEHTYEHRAEQLLE 92
|
Length = 92 |
| >gnl|CDD|215469 PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 5e-04
Identities = 48/193 (24%), Positives = 81/193 (41%), Gaps = 29/193 (15%)
Query: 268 EYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKD 327
E P I+ V + EK L+ L+++ LP RL FVG + + E++
Sbjct: 262 EKPLIVYVGRLGAEK----NLDF----LKRVMERLPGARLAFVGDGPYREELEKM--FAG 311
Query: 328 KSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNS 387
F L +L + V + E G V+E MA+G +P+
Sbjct: 312 T--------PTVFTGMLQGDELSQAYASGDVFVMPSESETLGFVVLEAMASG-VPVVAAR 362
Query: 388 AGPKMDIVLEEDGQQTGFLAQ--NAEEYADAIVKIISMPETERLEMAAAARRRAARFSEQ 445
AG DI+ + +TGFL + ++ + + +++ PE R M AAAR ++
Sbjct: 363 AGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLLADPE-LRERMGAAAREEVEKW--- 418
Query: 446 RFYEDFKAAIRPI 458
D++AA R +
Sbjct: 419 ----DWRAATRKL 427
|
Length = 465 |
| >gnl|CDD|132490 TIGR03449, mycothiol_MshA, D-inositol-3-phosphate glycosyltransferase | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 6e-04
Identities = 62/236 (26%), Positives = 97/236 (41%), Gaps = 26/236 (11%)
Query: 222 ADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLERSTEY---------PA 271
AD + N+ + + + PDRI V P D + P +R+TE
Sbjct: 164 ADRLIANTDEEARDLVRHYDADPDRIDVVAPGADLERFR--PGDRATERARLGLPLDTKV 221
Query: 272 IISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVG--SCRNKSDEERLQSLKDKS 329
+ V + +P KA + L A + L + R+ VG S + + L L
Sbjct: 222 VAFVGRIQPLKAPDVLLRAVAELLDRDPDR--NLRVIVVGGPSGSGLATPDALIELAA-- 277
Query: 330 IELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAG 389
EL + V F +LV + A V +E FG+ +E A G +A G
Sbjct: 278 -ELGIADRVRFLPPRPPEELVHVYRAADVVAVPSYNESFGLVAMEAQACGTPVVAARVGG 336
Query: 390 PKMDIVLEEDGQQTGFLAQ--NAEEYADAIVKIISMPETERLEMAAAARRRAARFS 443
+ + DG+ TG L + ++ADA+ +++ P T R+ M AAA AA FS
Sbjct: 337 LPVAVA---DGE-TGLLVDGHDPADWADALARLLDDPRT-RIRMGAAAVEHAAGFS 387
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. Length = 405 |
| >gnl|CDD|100001 cd04955, GT1_like_6, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 39.9 bits (94), Expect = 0.002
Identities = 37/178 (20%), Positives = 70/178 (39%), Gaps = 29/178 (16%)
Query: 272 IISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIE 331
+ V + PE +EAFS K ++ L VG+ + + +L LK+K+
Sbjct: 196 YLLVGRIVPENNIDDLIEAFS----KSNSGKK---LVIVGNADHNTPYGKL--LKEKAAA 246
Query: 332 LKVDGNVEFYKNLLYRDLVKLLGGAVVG-IHSMIDEHFGISVVEYMAAGAIPIAHNSAGP 390
D + F + ++L++LL A + +H S++E MA G +A
Sbjct: 247 ---DPRIIFVGPIYDQELLELLRYAALFYLHGHSVGGTNPSLLEAMAYGCPVLAS----- 298
Query: 391 KMDI-----VLEEDGQQTGFLAQNAEEYADAIVKIISMPETERLEMAAAARRRAARFS 443
D VL + + ++ A + ++ + PE AA R +++
Sbjct: 299 --DNPFNREVLGDK----AIYFKVGDDLASLLEELEADPEEVSAMAKAARERIREKYT 350
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in certain bacteria and Archaea. Length = 363 |
| >gnl|CDD|99984 cd03813, GT1_like_3, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 39.1 bits (92), Expect = 0.004
Identities = 37/175 (21%), Positives = 77/175 (44%), Gaps = 17/175 (9%)
Query: 288 LEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYR 347
+ A ++ +K+ P +G D E + ++ L ++ NV+F ++
Sbjct: 312 IRAAAIVRKKI----PDAEGWVIGP--TDEDPEYAEECRELVESLGLEDNVKF---TGFQ 362
Query: 348 DLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQ---QTG 404
++ + L V + + I E + ++E MAAG IP+ G +++ D + G
Sbjct: 363 NVKEYLPKLDVLVLTSISEGQPLVILEAMAAG-IPVVATDVGSCRELIEGADDEALGPAG 421
Query: 405 FL--AQNAEEYADAIVKIISMPETERLEMAAAARRRAARF-SEQRFYEDFKAAIR 456
+ + E A AI++++ PE R M A R+R R+ + +R + ++
Sbjct: 422 EVVPPADPEALARAILRLLKDPE-LRRAMGEAGRKRVERYYTLERMIDSYRRLYL 475
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 475 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 464 | |||
| PLN02949 | 463 | transferase, transferring glycosyl groups | 100.0 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 100.0 | |
| KOG1387 | 465 | consensus Glycosyltransferase [Cell wall/membrane/ | 100.0 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 100.0 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 100.0 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 100.0 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 100.0 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 100.0 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 100.0 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 100.0 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 100.0 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 100.0 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 100.0 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 100.0 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 100.0 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 100.0 | |
| PLN02316 | 1036 | synthase/transferase | 100.0 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 100.0 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 100.0 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 100.0 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 100.0 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 100.0 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 100.0 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 100.0 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 100.0 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 100.0 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 100.0 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 100.0 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 100.0 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 100.0 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 100.0 | |
| PLN00142 | 815 | sucrose synthase | 100.0 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 100.0 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 100.0 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 100.0 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 100.0 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 100.0 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 100.0 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 100.0 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 100.0 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 100.0 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 100.0 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 100.0 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 100.0 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 100.0 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 100.0 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 100.0 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 100.0 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 100.0 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 100.0 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 100.0 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 100.0 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 100.0 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 100.0 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 100.0 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 100.0 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 100.0 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 100.0 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 100.0 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 100.0 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 100.0 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 100.0 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 99.97 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.96 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.96 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.96 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.95 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.95 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.95 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.95 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 99.95 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 99.95 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.94 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 99.94 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.94 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.94 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.93 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.92 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.92 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 99.9 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 99.9 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 99.9 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 99.88 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.87 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 99.85 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.85 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 99.85 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 99.84 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 99.82 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.79 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 99.76 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 99.74 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 99.73 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 99.73 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 99.65 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 99.63 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 99.62 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 99.61 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 99.59 | |
| PRK12446 | 352 | undecaprenyldiphospho-muramoylpentapeptide beta-N- | 99.57 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 99.57 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 99.52 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 99.52 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 99.51 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 99.5 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 99.47 | |
| COG3914 | 620 | Spy Predicted O-linked N-acetylglucosamine transfe | 99.46 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 99.33 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 99.33 | |
| PF13528 | 318 | Glyco_trans_1_3: Glycosyl transferase family 1 | 99.33 | |
| PF09314 | 185 | DUF1972: Domain of unknown function (DUF1972); Int | 99.19 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 99.19 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 99.18 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 99.18 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 99.14 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 99.13 | |
| COG4641 | 373 | Uncharacterized protein conserved in bacteria [Fun | 99.09 | |
| PHA03392 | 507 | egt ecdysteroid UDP-glucosyltransferase; Provision | 99.08 | |
| PF04007 | 335 | DUF354: Protein of unknown function (DUF354); Inte | 99.06 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 99.05 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 99.04 | |
| PRK02797 | 322 | 4-alpha-L-fucosyltransferase; Provisional | 99.0 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 98.97 | |
| TIGR00661 | 321 | MJ1255 conserved hypothetical protein. This model | 98.96 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 98.93 | |
| COG1819 | 406 | Glycosyl transferases, related to UDP-glucuronosyl | 98.92 | |
| PRK10017 | 426 | colanic acid biosynthesis protein; Provisional | 98.92 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 98.87 | |
| PRK14089 | 347 | ipid-A-disaccharide synthase; Provisional | 98.68 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 98.66 | |
| KOG3742 | 692 | consensus Glycogen synthase [Carbohydrate transpor | 98.66 | |
| COG4671 | 400 | Predicted glycosyl transferase [General function p | 98.53 | |
| PF13477 | 139 | Glyco_trans_4_2: Glycosyl transferase 4-like | 98.47 | |
| PLN02448 | 459 | UDP-glycosyltransferase family protein | 98.44 | |
| PF04464 | 369 | Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate | 98.42 | |
| COG1817 | 346 | Uncharacterized protein conserved in archaea [Func | 98.39 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 98.28 | |
| PLN03007 | 482 | UDP-glucosyltransferase family protein | 98.27 | |
| COG3980 | 318 | spsG Spore coat polysaccharide biosynthesis protei | 98.26 | |
| PF12000 | 171 | Glyco_trans_4_3: Gkycosyl transferase family 4 gro | 97.91 | |
| cd03789 | 279 | GT1_LPS_heptosyltransferase Lipopolysaccharide hep | 97.88 | |
| PF04101 | 167 | Glyco_tran_28_C: Glycosyltransferase family 28 C-t | 97.75 | |
| COG0859 | 334 | RfaF ADP-heptose:LPS heptosyltransferase [Cell env | 97.63 | |
| TIGR02193 | 319 | heptsyl_trn_I lipopolysaccharide heptosyltransfera | 97.62 | |
| KOG1050 | 732 | consensus Trehalose-6-phosphate synthase component | 97.6 | |
| COG3660 | 329 | Predicted nucleoside-diphosphate-sugar epimerase [ | 97.59 | |
| PLN02210 | 456 | UDP-glucosyl transferase | 97.58 | |
| PRK10422 | 352 | lipopolysaccharide core biosynthesis protein; Prov | 97.58 | |
| TIGR03609 | 298 | S_layer_CsaB polysaccharide pyruvyl transferase Cs | 97.54 | |
| COG2327 | 385 | WcaK Polysaccharide pyruvyl transferase family pro | 97.51 | |
| PRK10964 | 322 | ADP-heptose:LPS heptosyl transferase I; Provisiona | 97.44 | |
| COG0058 | 750 | GlgP Glucan phosphorylase [Carbohydrate transport | 97.32 | |
| TIGR02201 | 344 | heptsyl_trn_III lipopolysaccharide heptosyltransfe | 97.26 | |
| TIGR02195 | 334 | heptsyl_trn_II lipopolysaccharide heptosyltransfer | 97.24 | |
| PF04413 | 186 | Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid | 97.19 | |
| PRK10916 | 348 | ADP-heptose:LPS heptosyltransferase II; Provisiona | 97.13 | |
| PF10933 | 364 | DUF2827: Protein of unknown function (DUF2827); In | 97.12 | |
| PF06258 | 311 | Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP | 97.05 | |
| PF00201 | 500 | UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera | 96.94 | |
| PLN02562 | 448 | UDP-glycosyltransferase | 96.9 | |
| PLN02410 | 451 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 96.9 | |
| PLN02670 | 472 | transferase, transferring glycosyl groups | 96.86 | |
| PF12038 | 168 | DUF3524: Domain of unknown function (DUF3524); Int | 96.8 | |
| PF01075 | 247 | Glyco_transf_9: Glycosyltransferase family 9 (hept | 96.79 | |
| PF00343 | 713 | Phosphorylase: Carbohydrate phosphorylase; InterPr | 96.75 | |
| PLN02764 | 453 | glycosyltransferase family protein | 96.62 | |
| PLN02554 | 481 | UDP-glycosyltransferase family protein | 96.57 | |
| PLN03004 | 451 | UDP-glycosyltransferase | 96.46 | |
| PLN02534 | 491 | UDP-glycosyltransferase | 96.4 | |
| PLN00414 | 446 | glycosyltransferase family protein | 96.35 | |
| PLN02167 | 475 | UDP-glycosyltransferase family protein | 96.35 | |
| PLN02863 | 477 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 96.33 | |
| PLN00164 | 480 | glucosyltransferase; Provisional | 96.3 | |
| PLN02208 | 442 | glycosyltransferase family protein | 96.21 | |
| PRK14986 | 815 | glycogen phosphorylase; Provisional | 96.13 | |
| PF04230 | 286 | PS_pyruv_trans: Polysaccharide pyruvyl transferase | 96.12 | |
| PLN02207 | 468 | UDP-glycosyltransferase | 96.06 | |
| TIGR02093 | 794 | P_ylase glycogen/starch/alpha-glucan phosphorylase | 95.99 | |
| PLN02152 | 455 | indole-3-acetate beta-glucosyltransferase | 95.99 | |
| PLN02992 | 481 | coniferyl-alcohol glucosyltransferase | 95.94 | |
| PLN02173 | 449 | UDP-glucosyl transferase family protein | 95.94 | |
| cd04300 | 797 | GT1_Glycogen_Phosphorylase This is a family of oli | 95.9 | |
| PF08660 | 170 | Alg14: Oligosaccharide biosynthesis protein Alg14 | 95.85 | |
| PF00862 | 550 | Sucrose_synth: Sucrose synthase; InterPro: IPR0003 | 95.84 | |
| PF11440 | 355 | AGT: DNA alpha-glucosyltransferase; InterPro: IPR0 | 95.82 | |
| PRK14985 | 798 | maltodextrin phosphorylase; Provisional | 95.74 | |
| PLN02555 | 480 | limonoid glucosyltransferase | 95.73 | |
| PF15024 | 559 | Glyco_transf_18: Glycosyltransferase family 18 | 95.71 | |
| COG4370 | 412 | Uncharacterized protein conserved in bacteria [Fun | 95.65 | |
| PF08288 | 90 | PIGA: PIGA (GPI anchor biosynthesis); InterPro: IP | 95.5 | |
| PF06925 | 169 | MGDG_synth: Monogalactosyldiacylglycerol (MGDG) sy | 94.76 | |
| KOG0780 | 483 | consensus Signal recognition particle, subunit Srp | 94.39 | |
| PF05159 | 269 | Capsule_synth: Capsule polysaccharide biosynthesis | 93.93 | |
| COG1887 | 388 | TagB Putative glycosyl/glycerophosphate transferas | 93.76 | |
| KOG1192 | 496 | consensus UDP-glucuronosyl and UDP-glucosyl transf | 93.53 | |
| PF10087 | 97 | DUF2325: Uncharacterized protein conserved in bact | 92.78 | |
| PLN03015 | 470 | UDP-glucosyl transferase | 92.59 | |
| PF03016 | 302 | Exostosin: Exostosin family; InterPro: IPR004263 H | 92.1 | |
| PF11997 | 268 | DUF3492: Domain of unknown function (DUF3492); Int | 90.26 | |
| KOG1021 | 464 | consensus Acetylglucosaminyltransferase EXT1/exost | 90.06 | |
| PF04392 | 294 | ABC_sub_bind: ABC transporter substrate binding pr | 88.85 | |
| PF12996 | 79 | DUF3880: DUF based on E. rectale Gene description | 88.39 | |
| KOG3339 | 211 | consensus Predicted glycosyltransferase [General f | 88.39 | |
| COG0373 | 414 | HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | 85.87 | |
| PRK13398 | 266 | 3-deoxy-7-phosphoheptulonate synthase; Provisional | 85.3 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 84.79 | |
| PF11071 | 141 | DUF2872: Protein of unknown function (DUF2872); In | 82.88 | |
| COG1703 | 323 | ArgK Putative periplasmic protein kinase ArgK and | 82.35 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 80.11 |
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-63 Score=482.59 Aligned_cols=455 Identities=79% Similarity=1.301 Sum_probs=395.2
Q ss_pred HHHHHHHHHHHHHH----hhhcccccccccceEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhH
Q 012436 9 WAVITAVLASILIL----ASHVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSL 84 (464)
Q Consensus 9 ~~~~~~~~~~~~~~----~~~~~~~~~~~~mkI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~ 84 (464)
|.+...++.+.+.+ ++-..+.+..++++|+|+||+++.|||+||++++.+.+|++.|++++|++||++.|.+.+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~HP~~~~ggG~ERvl~~a~~~l~~~~~~~~v~iyt~~~d~~~~~~ 83 (463)
T PLN02949 4 WLILYHLLTSIVLLLVAIALSVLRARRSRKRAVGFFHPYTNDGGGGERVLWCAVRAIQEENPDLDCVIYTGDHDASPDSL 83 (463)
T ss_pred eeeHHHHHHHHHHHHHHHHHHHHhcccCCCcEEEEECCCCCCCCChhhHHHHHHHHHHhhCCCCeEEEEcCCCCCCHHHH
Confidence 33334444444333 33347788888999999999999999999999999999999999999999999887777777
Q ss_pred HHHHHhhcCcccCCCceeeeeecccccccccCcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccchhhhccCceE
Q 012436 85 LARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRV 164 (464)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~p~ 164 (464)
.....+.+++.+.....++.+..+.|++.+.+++++.+++.++.++..++.+.+..||+++++.++++.+|+++..++|+
T Consensus 84 l~~~~~~~~i~~~~~~~~v~l~~~~~~~~~~~~~~t~~~~~~~~~~l~~~~~~~~~p~v~vDt~~~~~~~pl~~~~~~~v 163 (463)
T PLN02949 84 AARARDRFGVELLSPPKVVHLRKRKWIEEETYPRFTMIGQSLGSVYLAWEALCKFTPLYFFDTSGYAFTYPLARLFGCKV 163 (463)
T ss_pred HHHHHhhcceecCCCceEEEeccccccccccCCceehHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccHHHHHHhcCCcE
Confidence 77788899998887777888877899999999999999999999999999888788999999999999999888889999
Q ss_pred EEEeeCCcchhhhhhcccccccccCCCcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCC
Q 012436 165 ICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPD 244 (464)
Q Consensus 165 v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~ 244 (464)
++|+|+|.+..||...+.++...|++........+....+..|++.+.++++...+.+|.++++|++.++.+.+.++.++
T Consensus 164 ~~yvH~p~~~~dm~~~v~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~~l~~~~~~~ad~ii~nS~~t~~~l~~~~~~~~ 243 (463)
T PLN02949 164 VCYTHYPTISSDMISRVRDRSSMYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVNSSWTKSHIEALWRIPE 243 (463)
T ss_pred EEEEeCCcchHHHHHHHhhcccccCccchhhccchhHHHHHHHHHHHHHHHHHHcCCCCEEEECCHHHHHHHHHHcCCCC
Confidence 99999999999999999999999999888777777778888999999999999999999999999999999988877667
Q ss_pred CeEEecCCCCCCCCccCCCCCCCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHH
Q 012436 245 RIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQS 324 (464)
Q Consensus 245 ~i~~i~~~~d~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~ 324 (464)
++.+++||+|.+.+...+.....++..++++||+.++||++.+++|+..+.++.....|+++|+|+|+++..++.++.++
T Consensus 244 ~i~vvyp~vd~~~~~~~~~~~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~~~~~~~~~e 323 (463)
T PLN02949 244 RIKRVYPPCDTSGLQALPLERSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRNKEDEERLQK 323 (463)
T ss_pred CeEEEcCCCCHHHcccCCccccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCCcccHHHHHH
Confidence 88999999987655332322234457899999999999999999999988764322226899999999876666778899
Q ss_pred HHHHHHhcCCCCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccce
Q 012436 325 LKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTG 404 (464)
Q Consensus 325 l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g 404 (464)
++++++++++.++|.|+|+++.+++.++|+.||++++||..|+||++++|||++|+|||+++.+|..++++.++.++.+|
T Consensus 324 L~~la~~l~L~~~V~f~g~v~~~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG 403 (463)
T PLN02949 324 LKDRAKELGLDGDVEFHKNVSYRDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTG 403 (463)
T ss_pred HHHHHHHcCCCCcEEEeCCCCHHHHHHHHHhCcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999867888754445689
Q ss_pred eecCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhhcC
Q 012436 405 FLAQNAEEYADAIVKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIRPILCHAA 463 (464)
Q Consensus 405 ~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 463 (464)
++++|+++++++|.++++++++.++++++++++.+++|||+.+.+++.+.++++++...
T Consensus 404 ~l~~~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i~~l~~~~~ 462 (463)
T PLN02949 404 FLATTVEEYADAILEVLRMRETERLEIAAAARKRANRFSEQRFNEDFKDAIRPILNSAS 462 (463)
T ss_pred ccCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhhhc
Confidence 99999999999999999845678889999999999889999999999999999887643
|
|
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-55 Score=427.05 Aligned_cols=410 Identities=51% Similarity=0.879 Sum_probs=352.2
Q ss_pred eEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeee-cccccccc
Q 012436 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLY-RRKWIEES 114 (464)
Q Consensus 36 kI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 114 (464)
-|+|+||+++.|||+||++++.+.+|++.+.+++|+++|++.+.......++....|.+....+..++.+. .+.|...+
T Consensus 2 ~~~f~hp~~~~ggg~ervl~~a~~~l~~~~~~~~v~i~t~~~~~~~~~~l~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 81 (419)
T cd03806 2 TVGFFHPYCNAGGGGERVLWCAVRALQKRYPNNIVVIYTGDLDATPEEILEKVESRFNIELDRPRIVFFLLKYRKLVEAS 81 (419)
T ss_pred eEEEECCCCCCCCCchHHHHHHHHHHHHhCCCcEEEEECCCCCCCHHHHHHHHHHhcCeecCCCceEEEEecceeeeccc
Confidence 58999999999999999999999999999778999999999876666777788888888888777777664 66788888
Q ss_pred cCcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccchhhh-ccCceEEEEeeCCcchhhhhhcccccccccCCCcc
Q 012436 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLAR-IFGCRVICYTHYPTISLDMISRVREGSSMYNNNAS 193 (464)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~~~~-~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~ 193 (464)
.++++..+.+++..+...++.+.+.+|||+++++++++.+++++ ..++|+|+|+|+|.++.|+...+......|+|...
T Consensus 82 ~~~r~~~~~~~~~~~~~~~~~~~~~~pDv~i~~~g~~~~~~~~~~~~~~~~i~y~h~P~~~~d~l~~~~~~~~~~~~~~~ 161 (419)
T cd03806 82 TYPRFTLLGQALGSMILGLEALLKLVPDIFIDTMGYPFTYPLVRLLGGCPVGAYVHYPTISTDMLQKVRSREASYNNSAT 161 (419)
T ss_pred cCCceeeHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccHHHHHHHhcCCeEEEEecCCcchHHHHHHHhhccccccCccc
Confidence 99999999999988888888877778999999999898888766 57899999999999888888777777778888877
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCCCCCCCCCcEEE
Q 012436 194 IAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAII 273 (464)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~~~~~~~~~~i~ 273 (464)
..........+..|++.+.+++++.++.+|.++++|++.++.+.+.++...++.+++||+|.+.+.+.+.....+..+++
T Consensus 162 ~~~~~~~~~~k~~y~~~~~~~~~~~~~~aD~ii~~S~~~~~~~~~~~~~~~~~~vi~~gvd~~~~~~~~~~~~~~~~~il 241 (419)
T cd03806 162 IARSPVLSKAKLLYYRLFAFLYGLAGSFADVVMVNSTWTRNHIRSLWKRNTKPSIVYPPCDVEELLKLPLDEKTRENQIL 241 (419)
T ss_pred hhccchHHHHHHHHHHHHHHHHHHHhhcCCEEEECCHHHHHHHHHHhCcCCCcEEEcCCCCHHHhcccccccccCCcEEE
Confidence 77777767788899999999999999999999999999999999887655589999999998776533322234568999
Q ss_pred EEeccCCCCChHHHHHHHHHHHHHhcC-CCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHH
Q 012436 274 SVAQFRPEKAHPLQLEAFSVALRKLDA-DLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKL 352 (464)
Q Consensus 274 ~~G~~~~~K~~~~ll~a~~~l~~~~~~-~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~ 352 (464)
|+||+.+.||++.+++|+..+.+...+ ..++++|+|+|+++..++.++.++|+++++++++.++|+|+|++|.+++.++
T Consensus 242 ~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l~~~V~f~g~v~~~~l~~~ 321 (419)
T cd03806 242 SIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNEDDEKRVEDLKLLAKELGLEDKVEFVVNAPFEELLEE 321 (419)
T ss_pred EEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCeEEEecCCCHHHHHHH
Confidence 999999999999999999999876521 0125999999998776666788999999999999999999999999999999
Q ss_pred HhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceec---ccCCccceeecCCHHHHHHHHHHHHcCCHHH-H
Q 012436 353 LGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVL---EEDGQQTGFLAQNAEEYADAIVKIISMPETE-R 428 (464)
Q Consensus 353 l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~---~~~~~~~g~~~~~~~~la~~i~~l~~~~~~~-~ 428 (464)
|+.||++++||..|+||++++|||+||+|||+++.+|..++++. + +.+|++++|+++++++|.++++ +++. +
T Consensus 322 l~~adv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~---g~~G~l~~d~~~la~ai~~ll~-~~~~~~ 397 (419)
T cd03806 322 LSTASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDG---GPTGFLASTAEEYAEAIEKILS-LSEEER 397 (419)
T ss_pred HHhCeEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCC---CCceEEeCCHHHHHHHHHHHHh-CCHHHH
Confidence 99999999999999999999999999999999999887678988 6 8999999999999999999998 6554 4
Q ss_pred HHHHHHHHHHHHccCHHHHHH
Q 012436 429 LEMAAAARRRAARFSEQRFYE 449 (464)
Q Consensus 429 ~~~~~~~~~~~~~~s~~~~~~ 449 (464)
+.+++++++..++||++.+.+
T Consensus 398 ~~~~~~~~~~~~~fs~~~f~~ 418 (419)
T cd03806 398 LRIRRAARSSVKRFSDEEFER 418 (419)
T ss_pred HHHHHHHHHHHHhhCHHHhcc
Confidence 445444444339999998754
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-54 Score=371.57 Aligned_cols=421 Identities=43% Similarity=0.749 Sum_probs=380.6
Q ss_pred ccccceEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCc-eeeeeeccc
Q 012436 31 RNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPP-KVVHLYRRK 109 (464)
Q Consensus 31 ~~~~mkI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 109 (464)
++..+.++|+|||++.|||+||+++..++.+++...++..++|+++.+.++..+..+.++.|++.++.+. .+++++.|.
T Consensus 40 ~k~~ktvgfFHPYCNAGGGGErVLW~Avr~~q~k~~n~~~viYsGD~n~t~~~IL~k~k~~F~idlDs~nI~Fi~Lk~R~ 119 (465)
T KOG1387|consen 40 EKNVKTVGFFHPYCNAGGGGERVLWKAVRITQRKFPNNVIVIYSGDFNVTPENILNKVKNKFDIDLDSDNIFFIYLKLRY 119 (465)
T ss_pred hhhceEEEEecccccCCCCcceehhHHHHHHHHhCCCceEEEEeCCCCCCHHHHHHHHHHhcCceecccceEEEEEEeee
Confidence 5556789999999999999999999999999999999999999999999999999999999999998765 899999999
Q ss_pred ccccccCcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccchhhh-ccCceEEEEeeCCcchhhhhhccccccccc
Q 012436 110 WIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLAR-IFGCRVICYTHYPTISLDMISRVREGSSMY 188 (464)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~~~~-~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~ 188 (464)
+...+.|+++..+.|.+..+..+++.+-++.||+.|++.++++.+|+.+ +.++|++.|.|+|.+++||...+.+++.
T Consensus 120 lVea~~~~hfTllgQaigsmIl~~Eai~r~~Pdi~IDtMGY~fs~p~~r~l~~~~V~aYvHYP~iS~DML~~l~qrq~-- 197 (465)
T KOG1387|consen 120 LVEASTWKHFTLLGQAIGSMILAFEAIIRFPPDIFIDTMGYPFSYPIFRRLRRIPVVAYVHYPTISTDMLKKLFQRQK-- 197 (465)
T ss_pred eeecccccceehHHHHHHHHHHHHHHHHhCCchheEecCCCcchhHHHHHHccCceEEEEecccccHHHHHHHHhhhh--
Confidence 9999999999999999999999999999999999999999999999555 8999999999999999999998886543
Q ss_pred CCCcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCCCCCCCC
Q 012436 189 NNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTE 268 (464)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~~~~~~~ 268 (464)
.+.+..-+..|+++|..++..+-+.||.++++|.++..++.+.++. .++.++++|++.+..........++
T Consensus 198 --------s~~l~~~KlaY~rlFa~lY~~~G~~ad~vm~NssWT~nHI~qiW~~-~~~~iVyPPC~~e~lks~~~te~~r 268 (465)
T KOG1387|consen 198 --------SGILVWGKLAYWRLFALLYQSAGSKADIVMTNSSWTNNHIKQIWQS-NTCSIVYPPCSTEDLKSKFGTEGER 268 (465)
T ss_pred --------cchhhhHHHHHHHHHHHHHHhccccceEEEecchhhHHHHHHHhhc-cceeEEcCCCCHHHHHHHhcccCCc
Confidence 1255556677999999999999999999999999999999999885 7788899999998776554455567
Q ss_pred CcEEEEEeccCCCCChHHHHHHHHHHHHHhcC--CCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCh
Q 012436 269 YPAIISVAQFRPEKAHPLQLEAFSVALRKLDA--DLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLY 346 (464)
Q Consensus 269 ~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~--~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~ 346 (464)
.+.++++|+++|+|+.. +++.++....+.+. ..++++|.++|++.+++|+++.+.|++.+++++++.+|.|.-.+|.
T Consensus 269 ~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivGScRneeD~ervk~Lkd~a~~L~i~~~v~F~~N~Py 347 (465)
T KOG1387|consen 269 ENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVGSCRNEEDEERVKSLKDLAEELKIPKHVQFEKNVPY 347 (465)
T ss_pred ceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEeccCChhhHHHHHHHHHHHHhcCCccceEEEecCCH
Confidence 78999999999999999 55555544333222 3368999999999999999999999999999999999999999999
Q ss_pred hHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecCCHHHHHHHHHHHHcCCHH
Q 012436 347 RDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQNAEEYADAIVKIISMPET 426 (464)
Q Consensus 347 ~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~~~~~la~~i~~l~~~~~~ 426 (464)
+++..+|+.|.+.++..+.|.||+++.||||+|+-+|+.+.||+.-|++.++++..+||+.++.++.++++.+++.+|.+
T Consensus 348 ~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGFla~t~~EYaE~iLkIv~~~~~ 427 (465)
T KOG1387|consen 348 EKLVELLGKATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGFLAPTDEEYAEAILKIVKLNYD 427 (465)
T ss_pred HHHHHHhccceeehhhhhhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccCCccceeecCChHHHHHHHHHHHHcCHH
Confidence 99999999999999999999999999999999999999999999999999999899999999999999999999998898
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhhcC
Q 012436 427 ERLEMAAAARRRAARFSEQRFYEDFKAAIRPILCHAA 463 (464)
Q Consensus 427 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 463 (464)
++..++++||..+.+|+...+.+.+...+..++....
T Consensus 428 ~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~kll~e~~ 464 (465)
T KOG1387|consen 428 ERNMMRRNARKSLARFGELKFDKDWENPICKLLEEEE 464 (465)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHhHhHHHHHhhcccc
Confidence 8999999999999999999999999999998887643
|
|
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-43 Score=343.06 Aligned_cols=365 Identities=15% Similarity=0.129 Sum_probs=271.6
Q ss_pred eEEEecCCCCC-CCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeecccccccc
Q 012436 36 SVAFFHPNTND-GGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (464)
Q Consensus 36 kI~~~~~~~~~-~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (464)
||+++.+++.+ .||+++++..++++|.+.|| +|+++++..+.... .+ ....+++++.++...+....
T Consensus 1 kI~~v~~~~~p~~GG~e~~~~~la~~L~~~G~--~V~v~~~~~~~~~~--~~--------~~~~~i~v~~~p~~~~~~~~ 68 (398)
T cd03796 1 RICMVSDFFYPNLGGVETHIYQLSQCLIKRGH--KVVVITHAYGNRVG--IR--------YLTNGLKVYYLPFVVFYNQS 68 (398)
T ss_pred CeeEEeeccccccccHHHHHHHHHHHHHHcCC--eeEEEeccCCcCCC--cc--------cccCceeEEEecceeccCCc
Confidence 78988885554 49999999999999999995 55555543210000 00 00112244444432221111
Q ss_pred cCcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccc----hhhhccCceEEEEeeCCcchhhhhhcccccccccCC
Q 012436 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTY----PLARIFGCRVICYTHYPTISLDMISRVREGSSMYNN 190 (464)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~----~~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~ 190 (464)
... ..+.....+.+.+++.+||+||.++...... .+++..++|+|++.|....
T Consensus 69 ~~~------~~~~~~~~l~~~~~~~~~DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~h~~~~----------------- 125 (398)
T cd03796 69 TLP------TFFGTFPLLRNILIRERITIVHGHQAFSALAHEALLHARTMGLKTVFTDHSLFG----------------- 125 (398)
T ss_pred ccc------chhhhHHHHHHHHHhcCCCEEEECCCCchHHHHHHHHhhhcCCcEEEEeccccc-----------------
Confidence 111 1122334455567788999999887654432 1456789999999993210
Q ss_pred CcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCC-CCCeEEecCCCCCCCCccCCCCCCCCC
Q 012436 191 NASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLERSTEY 269 (464)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~-~~~i~~i~~~~d~~~~~~~~~~~~~~~ 269 (464)
..... .....+..+..++++|.++++|+...+.+....+. .+++.+||||+|.+.+.+.+....++.
T Consensus 126 --------~~~~~----~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~k~~vi~ngvd~~~f~~~~~~~~~~~ 193 (398)
T cd03796 126 --------FADAS----SIHTNKLLRFSLADVDHVICVSHTSKENTVLRASLDPERVSVIPNAVDSSDFTPDPSKRDNDK 193 (398)
T ss_pred --------ccchh----hHHhhHHHHHhhccCCEEEEecHhHhhHHHHHhCCChhhEEEEcCccCHHHcCCCcccCCCCc
Confidence 00000 01122344666799999999999998876444343 678899999999887764333334567
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHH
Q 012436 270 PAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDL 349 (464)
Q Consensus 270 ~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~ 349 (464)
++++|+|++.+.||++.+++|++.+.++. |+++|+++|+++. .+.++++++++++.++|.|.|+++.+++
T Consensus 194 ~~i~~~grl~~~Kg~~~li~a~~~l~~~~----~~~~l~i~G~g~~------~~~l~~~~~~~~l~~~v~~~G~~~~~~~ 263 (398)
T cd03796 194 ITIVVISRLVYRKGIDLLVGIIPEICKKH----PNVRFIIGGDGPK------RILLEEMREKYNLQDRVELLGAVPHERV 263 (398)
T ss_pred eEEEEEeccchhcCHHHHHHHHHHHHhhC----CCEEEEEEeCCch------HHHHHHHHHHhCCCCeEEEeCCCCHHHH
Confidence 89999999999999999999999987765 6999999999864 3678899999999999999999999999
Q ss_pred HHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecCCHHHHHHHHHHHHcCCHHHHH
Q 012436 350 VKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQNAEEYADAIVKIISMPETERL 429 (464)
Q Consensus 350 ~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~~~~~la~~i~~l~~~~~~~~~ 429 (464)
.++|+.||++++||..|++|++++|||+||+|||+++.+|. .|++.+ +..++..+|+++++++|.++++ ++.+..
T Consensus 264 ~~~l~~ad~~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg~-~e~i~~---~~~~~~~~~~~~l~~~l~~~l~-~~~~~~ 338 (398)
T cd03796 264 RDVLVQGHIFLNTSLTEAFCIAIVEAASCGLLVVSTRVGGI-PEVLPP---DMILLAEPDVESIVRKLEEAIS-ILRTGK 338 (398)
T ss_pred HHHHHhCCEEEeCChhhccCHHHHHHHHcCCCEEECCCCCc-hhheeC---CceeecCCCHHHHHHHHHHHHh-Chhhhh
Confidence 99999999999999999999999999999999999999988 788877 5444444599999999999998 877666
Q ss_pred HHHHHHHHHH-HccCHHHHHHHHHHHHHHHHhhc
Q 012436 430 EMAAAARRRA-ARFSEQRFYEDFKAAIRPILCHA 462 (464)
Q Consensus 430 ~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~ 462 (464)
.+.+++++.+ ++|||+.+++++.++|++++...
T Consensus 339 ~~~~~~~~~~~~~fs~~~~~~~~~~~y~~l~~~~ 372 (398)
T cd03796 339 HDPWSFHNRVKKMYSWEDVAKRTEKVYDRILQTP 372 (398)
T ss_pred hHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhcCC
Confidence 7788888888 99999999999999999988653
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-42 Score=335.56 Aligned_cols=375 Identities=29% Similarity=0.427 Sum_probs=271.9
Q ss_pred ceEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeecccccccc
Q 012436 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (464)
Q Consensus 35 mkI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (464)
|||++++|++.. ||+|+++.+++++|.+.|| +|.++|...+ .......... + ...+.... .+....
T Consensus 1 mkIl~~~~~~~~-gG~e~~~~~la~~L~~~G~--~V~v~~~~~~--~~~~~~~~~~--~-----~~~i~~~~--~~~~~~ 66 (392)
T cd03805 1 LRVAFIHPDLGI-GGAERLVVDAALALQSRGH--EVTIYTSHHD--PSHCFEETKD--G-----TLPVRVRG--DWLPRS 66 (392)
T ss_pred CeEEEECCCCCC-chHHHHHHHHHHHHHhCCC--eEEEEcCCCC--chhcchhccC--C-----eeEEEEEe--EEEcch
Confidence 899999999875 5999999999999999994 5555554321 1111111100 0 01111111 111111
Q ss_pred cCcceehhhhchhhhHHHHH--HhhhcCCcEEEecccccccchhhh-ccCceEEEEeeCCcchhhhhhcccccccccCCC
Q 012436 115 TYPRFTMIGQSFGSVYLSWE--ALCKFTPLYYFDTSGYAFTYPLAR-IFGCRVICYTHYPTISLDMISRVREGSSMYNNN 191 (464)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~--~l~~~~~Dvv~~~~~~~~~~~~~~-~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~ 191 (464)
...++..+...+........ .+...++|+||.+...... ++.+ ..+.|+++++|+|....+.
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~-~~~~~~~~~~~i~~~h~~~~~~~~-------------- 131 (392)
T cd03805 67 IFGRFHILCAYLRMLYLALYLLLLPDEKYDVFIVDQVSACV-PLLKLFSPSKILFYCHFPDQLLAQ-------------- 131 (392)
T ss_pred hhHhHHHHHHHHHHHHHHHHHHhcccCCCCEEEEcCcchHH-HHHHHhcCCcEEEEEecChHHhcC--------------
Confidence 11111111222222222211 2456799999966543322 3323 3348999999976521100
Q ss_pred cccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCC-CC-CeEEecCCCCCCCCccCCC------
Q 012436 192 ASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PD-RIKRVYPPCDTSGLQVLPL------ 263 (464)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~-~~-~i~~i~~~~d~~~~~~~~~------ 263 (464)
........+...+.++++..++.+|.++++|+..++.+.+.++. .. ++.+|+||+|.+.+.+.+.
T Consensus 132 -------~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~~~vi~n~vd~~~~~~~~~~~~~~~ 204 (392)
T cd03805 132 -------RGSLLKRLYRKPFDWLEEFTTGMADKIVVNSNFTASVFKKTFPSLAKNPREVVYPCVDTDSFESTSEDPDPGL 204 (392)
T ss_pred -------CCcHHHHHHHHHHHHHHHHHhhCceEEEEcChhHHHHHHHHhcccccCCcceeCCCcCHHHcCcccccccccc
Confidence 01122334555667788999999999999999999999887654 33 3458999999887653221
Q ss_pred -CCCCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCC--ccHHHHHHHHHHHHh-cCCCCcEE
Q 012436 264 -ERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNK--SDEERLQSLKDKSIE-LKVDGNVE 339 (464)
Q Consensus 264 -~~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~--~~~~~~~~l~~~~~~-~~l~~~v~ 339 (464)
...++.++++++|++.+.||++.++++++++.++.. ..|+++|+++|+++.. ++.++.+++++.+++ +++.++|.
T Consensus 205 ~~~~~~~~~i~~~grl~~~Kg~~~ll~a~~~l~~~~~-~~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~~~l~~~V~ 283 (392)
T cd03805 205 LIPKSGKKTFLSINRFERKKNIALAIEAFAILKDKLA-EFKNVRLVIAGGYDPRVAENVEYLEELQRLAEELLLLEDQVI 283 (392)
T ss_pred cccCCCceEEEEEeeecccCChHHHHHHHHHHHhhcc-cccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHhcCCCceEE
Confidence 123566899999999999999999999999987641 0148999999988643 233567889999999 99999999
Q ss_pred EccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC-CHHHHHHHHH
Q 012436 340 FYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ-NAEEYADAIV 418 (464)
Q Consensus 340 ~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~-~~~~la~~i~ 418 (464)
|+|+++.+++.++|+.||++++||..|+||++++|||+||+|||+++.+|. .+++.+ +.+|++++ |+++++++|.
T Consensus 284 f~g~~~~~~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~~-~e~i~~---~~~g~~~~~~~~~~a~~i~ 359 (392)
T cd03805 284 FLPSISDSQKELLLSSARALLYTPSNEHFGIVPLEAMYAGKPVIACNSGGP-LETVVD---GETGFLCEPTPEEFAEAML 359 (392)
T ss_pred EeCCCChHHHHHHHhhCeEEEECCCcCCCCchHHHHHHcCCCEEEECCCCc-HHHhcc---CCceEEeCCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999988 788888 78998886 9999999999
Q ss_pred HHHcCCHHHHHHHHHHHHHHH-HccCHHHHHHHH
Q 012436 419 KIISMPETERLEMAAAARRRA-ARFSEQRFYEDF 451 (464)
Q Consensus 419 ~l~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~ 451 (464)
++++ +++.++++++++++.+ ++|||+.+++++
T Consensus 360 ~l~~-~~~~~~~~~~~a~~~~~~~~s~~~~~~~~ 392 (392)
T cd03805 360 KLAN-DPDLADRMGAAGRKRVKEKFSTEAFAERL 392 (392)
T ss_pred HHHh-ChHHHHHHHHHHHHHHHHhcCHHHHhhhC
Confidence 9999 9999999999999998 899999998764
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-42 Score=332.60 Aligned_cols=370 Identities=16% Similarity=0.158 Sum_probs=267.3
Q ss_pred ceEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeec-------
Q 012436 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYR------- 107 (464)
Q Consensus 35 mkI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 107 (464)
|||+|+.+.++.. +|+++.+-+.+|.+.|++++++.+-+..+.......+... +.. .+.+++.
T Consensus 1 m~ia~~~~~~P~~--setFi~~ei~~l~~~G~~v~~~s~~~~~~~~~~~~~~~~~------~~~--~~~~~~~~~~~~~~ 70 (406)
T PRK15427 1 MKVGFFLLKFPLS--SETFVLNQITAFIDMGFEVEIVALQKGDTQNTHAAWTKYN------LAA--KTRWLQDEPQGKVA 70 (406)
T ss_pred CeEEEEeccCCcc--chhhHHHHHHHHHHcCceEEEEEccCCCccccccchhhhc------ccc--ceeecCcCccchHH
Confidence 7999999888854 8999999999999999666655544332111110001000 000 1111110
Q ss_pred ----------ccccccc--cCcceehh---hhchhhhHHHHHHhhhcCCcEEEecccccccch--hhh--ccCceEEEEe
Q 012436 108 ----------RKWIEES--TYPRFTMI---GQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LAR--IFGCRVICYT 168 (464)
Q Consensus 108 ----------~~~~~~~--~~~~~~~~---~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~--~~~--~~~~p~v~~~ 168 (464)
..+.... ....+... ...+.....+...+++.+||+||+|.+...... +++ ..+.|.++++
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~ 150 (406)
T PRK15427 71 KLRHRASQTLRGIHRKNTWKALNLKRYGAESRNLILSAICAQVATPFVADVFIAHFGPAGVTAAKLRELGVLRGKIATIF 150 (406)
T ss_pred HHhhhhhhHhhhhcccchhccCChhhhhhhhHHHHHHHHHhhhhccCCCCEEEEcCChHHHHHHHHHHhCCCCCCeEEEE
Confidence 0000000 00000000 000001112233456778999998887554322 322 2345678899
Q ss_pred eCCcchhhhhhcccccccccCCCcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEE
Q 012436 169 HYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKR 248 (464)
Q Consensus 169 h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~ 248 (464)
|...+... .... .+. ...+..++++|.++++|+..++.+.+....++++.+
T Consensus 151 Hg~d~~~~---------------------~~~~----~~~----~~~~~~~~~ad~vv~~S~~~~~~l~~~g~~~~ki~v 201 (406)
T PRK15427 151 HGIDISSR---------------------EVLN----HYT----PEYQQLFRRGDLMLPISDLWAGRLQKMGCPPEKIAV 201 (406)
T ss_pred cccccccc---------------------hhhh----hhh----HHHHHHHHhCCEEEECCHHHHHHHHHcCCCHHHEEE
Confidence 95432000 0000 011 123445689999999999999999876323678999
Q ss_pred ecCCCCCCCCccCCCCCCCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHH
Q 012436 249 VYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDK 328 (464)
Q Consensus 249 i~~~~d~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~ 328 (464)
+|||+|.+.+...+.....+.+.++|+|++.+.||++.+++|++.+.++. ++++++++|+|+. .+++++.
T Consensus 202 i~nGvd~~~f~~~~~~~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~----~~~~l~ivG~G~~------~~~l~~~ 271 (406)
T PRK15427 202 SRMGVDMTRFSPRPVKAPATPLEIISVARLTEKKGLHVAIEACRQLKEQG----VAFRYRILGIGPW------ERRLRTL 271 (406)
T ss_pred cCCCCCHHHcCCCccccCCCCeEEEEEeCcchhcCHHHHHHHHHHHHhhC----CCEEEEEEECchh------HHHHHHH
Confidence 99999998876433333345678999999999999999999999998765 5899999999863 3789999
Q ss_pred HHhcCCCCcEEEccCCChhHHHHHHhcCcEEEEcCCC------CCCChHHHHHHHhCCcEEEeCCCCCccceecccCCcc
Q 012436 329 SIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMID------EHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQ 402 (464)
Q Consensus 329 ~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~------e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~ 402 (464)
++++++.++|.|.|+++++++.++|+.||++++||.. ||+|++++|||+||+|||+|+.+|. .|++.+ +.
T Consensus 272 ~~~~~l~~~V~~~G~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~-~E~v~~---~~ 347 (406)
T PRK15427 272 IEQYQLEDVVEMPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGI-PELVEA---DK 347 (406)
T ss_pred HHHcCCCCeEEEeCCCCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCc-hhhhcC---CC
Confidence 9999999999999999999999999999999999964 9999999999999999999999998 799988 89
Q ss_pred ceeecC--CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-HccCHHHHHHHHHHHHHH
Q 012436 403 TGFLAQ--NAEEYADAIVKIISMPETERLEMAAAARRRA-ARFSEQRFYEDFKAAIRP 457 (464)
Q Consensus 403 ~g~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~ 457 (464)
+|++++ |+++++++|.+++++|++.++++++++++.+ ++|+|+.+++++.+++++
T Consensus 348 ~G~lv~~~d~~~la~ai~~l~~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 348 SGWLVPENDAQALAQRLAAFSQLDTDELAPVVKRAREKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred ceEEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 999986 9999999999999878888999999999999 999999999999999876
|
|
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-41 Score=325.07 Aligned_cols=358 Identities=18% Similarity=0.167 Sum_probs=267.5
Q ss_pred ceEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeecccccccc
Q 012436 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (464)
Q Consensus 35 mkI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (464)
.||+++.+.+.. ||+|+++.+++++|.+.|+++.++.++.. ..+..... ..++ .++.+.....
T Consensus 2 ~~il~ii~~~~~-GG~e~~~~~l~~~l~~~~~~~~v~~~~~~-----~~~~~~~~-~~~i------~~~~~~~~~~---- 64 (374)
T TIGR03088 2 PLIVHVVYRFDV-GGLENGLVNLINHLPADRYRHAVVALTEV-----SAFRKRIQ-RPDV------AFYALHKQPG---- 64 (374)
T ss_pred ceEEEEeCCCCC-CcHHHHHHHHHhhccccccceEEEEcCCC-----ChhHHHHH-hcCc------eEEEeCCCCC----
Confidence 589998888865 59999999999999999966555543321 22222221 1233 3443332110
Q ss_pred cCcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccch-hhhccCceEEE-EeeCCcchhhhhhcccccccccCCCc
Q 012436 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-LARIFGCRVIC-YTHYPTISLDMISRVREGSSMYNNNA 192 (464)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~-~~~~~~~p~v~-~~h~p~~~~~~~~~~~~~~~~~~~~~ 192 (464)
..+.....+.+.+++.+||+||+++....... +++..++|..+ +.|... . .
T Consensus 65 ---------~~~~~~~~l~~~l~~~~~Divh~~~~~~~~~~~~~~~~~~~~~i~~~h~~~----~----~---------- 117 (374)
T TIGR03088 65 ---------KDVAVYPQLYRLLRQLRPDIVHTRNLAALEAQLPAALAGVPARIHGEHGRD----V----F---------- 117 (374)
T ss_pred ---------CChHHHHHHHHHHHHhCCCEEEEcchhHHHHHHHHHhcCCCeEEEeecCcc----c----c----------
Confidence 01233456667788999999998764332211 34456777533 233110 0 0
Q ss_pred ccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCC-CCCeEEecCCCCCCCCccCCCC-------
Q 012436 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLE------- 264 (464)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~-~~~i~~i~~~~d~~~~~~~~~~------- 264 (464)
.... ..+ .+.++.+...+.+|.++++|+..++.+.+.++. ..++.+|+||+|.+.+.+....
T Consensus 118 -----~~~~--~~~---~~~~~~~~~~~~~~~~i~vs~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~ 187 (374)
T TIGR03088 118 -----DLDG--SNW---KYRWLRRLYRPLIHHYVAVSRDLEDWLRGPVKVPPAKIHQIYNGVDTERFHPSRGDRSPILPP 187 (374)
T ss_pred -----cchh--hHH---HHHHHHHHHHhcCCeEEEeCHHHHHHHHHhcCCChhhEEEeccCccccccCCCccchhhhhHh
Confidence 0000 000 112334455577899999999999999887765 5788999999998876533211
Q ss_pred --CCCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEcc
Q 012436 265 --RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYK 342 (464)
Q Consensus 265 --~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g 342 (464)
..++.++++++||+.+.||++.+++|+..+.++..+..++++|+++|+|+.. +++++.++++++.+++.|.|
T Consensus 188 ~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~g~~~------~~~~~~~~~~~~~~~v~~~g 261 (374)
T TIGR03088 188 DFFADESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGDGPAR------GACEQMVRAAGLAHLVWLPG 261 (374)
T ss_pred hcCCCCCeEEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEEecCCchH------HHHHHHHHHcCCcceEEEcC
Confidence 1245689999999999999999999999988765321247999999998643 67888899999988999999
Q ss_pred CCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC--CHHHHHHHHHHH
Q 012436 343 NLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ--NAEEYADAIVKI 420 (464)
Q Consensus 343 ~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~--~~~~la~~i~~l 420 (464)
+. +|+.++|+.||++++||..|++|++++|||+||+|||+|+.+|. .|++.+ +.+|++++ |+++++++|.++
T Consensus 262 ~~--~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g~-~e~i~~---~~~g~~~~~~d~~~la~~i~~l 335 (374)
T TIGR03088 262 ER--DDVPALMQALDLFVLPSLAEGISNTILEAMASGLPVIATAVGGN-PELVQH---GVTGALVPPGDAVALARALQPY 335 (374)
T ss_pred Cc--CCHHHHHHhcCEEEeccccccCchHHHHHHHcCCCEEEcCCCCc-HHHhcC---CCceEEeCCCCHHHHHHHHHHH
Confidence 76 89999999999999999999999999999999999999999988 788888 88998885 999999999999
Q ss_pred HcCCHHHHHHHHHHHHHHH-HccCHHHHHHHHHHHHHHHH
Q 012436 421 ISMPETERLEMAAAARRRA-ARFSEQRFYEDFKAAIRPIL 459 (464)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~ 459 (464)
++ +++.++++++++++.+ ++|||+.+++++.++|++++
T Consensus 336 ~~-~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~ 374 (374)
T TIGR03088 336 VS-DPAARRAHGAAGRARAEQQFSINAMVAAYAGLYDQLL 374 (374)
T ss_pred Hh-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhC
Confidence 99 9999999999999998 89999999999999998763
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-41 Score=331.92 Aligned_cols=386 Identities=14% Similarity=0.055 Sum_probs=266.8
Q ss_pred ceEEEecCCC-CCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHH-hhcCcccCCCceeeeeecccccc
Q 012436 35 TSVAFFHPNT-NDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAV-DRFGVELLHPPKVVHLYRRKWIE 112 (464)
Q Consensus 35 mkI~~~~~~~-~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 112 (464)
|||++++.++ +..||++.++.+++++|.+.|| +|.++|+..........+... .........++++++++......
T Consensus 1 mkIlii~~~~~P~~~g~~~~~~~l~~~L~~~G~--~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~r~~~~~~~~ 78 (412)
T PRK10307 1 MKILVYGINYAPELTGIGKYTGEMAEWLAARGH--EVRVITAPPYYPQWRVGEGYSAWRYRRESEGGVTVWRCPLYVPKQ 78 (412)
T ss_pred CeEEEEecCCCCCccchhhhHHHHHHHHHHCCC--eEEEEecCCCCCCCCCCcccccccceeeecCCeEEEEccccCCCC
Confidence 8999998654 4458999999999999999995 555555432111000000000 00001111233555443311110
Q ss_pred cccCcceehhhhc-hhhhHHHHHHhhhcCCcEEEecccccccch----hhhccCceEEEEeeCCcchhhhhhcccccccc
Q 012436 113 ESTYPRFTMIGQS-FGSVYLSWEALCKFTPLYYFDTSGYAFTYP----LARIFGCRVICYTHYPTISLDMISRVREGSSM 187 (464)
Q Consensus 113 ~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~----~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~ 187 (464)
...+.+......+ +.......+.++ .+||+||.+.......+ +++..++|+++++|.-.. +.....
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Div~~~~p~~~~~~~~~~~~~~~~~~~v~~~~d~~~--~~~~~~------ 149 (412)
T PRK10307 79 PSGLKRLLHLGSFALSSFFPLLAQRR-WRPDRVIGVVPTLFCAPGARLLARLSGARTWLHIQDYEV--DAAFGL------ 149 (412)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhccC-CCCCEEEEeCCcHHHHHHHHHHHHhhCCCEEEEeccCCH--HHHHHh------
Confidence 1111111000000 111111112222 68999998765432211 566788999998883110 000000
Q ss_pred cCCCcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCCCC---
Q 012436 188 YNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLE--- 264 (464)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~~~--- 264 (464)
... ......+...++++++++.+|.++++|+..++.+.+......++.++|||+|.+.+.+.+..
T Consensus 150 ----------~~~--~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~~~~~~~i~vi~ngvd~~~~~~~~~~~~~ 217 (412)
T PRK10307 150 ----------GLL--KGGKVARLATAFERSLLRRFDNVSTISRSMMNKAREKGVAAEKVIFFPNWSEVARFQPVADADVD 217 (412)
T ss_pred ----------CCc--cCcHHHHHHHHHHHHHHhhCCEEEecCHHHHHHHHHcCCCcccEEEECCCcCHhhcCCCCccchH
Confidence 000 01123344556788889999999999999999998764336789999999998776532211
Q ss_pred -------CCCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCc
Q 012436 265 -------RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGN 337 (464)
Q Consensus 265 -------~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~ 337 (464)
.+++.++++|+|++.+.||++.+++|++.+.+. |+++|+|+|+|+.. ++++++++++++. +
T Consensus 218 ~~~~~~~~~~~~~~i~~~G~l~~~kg~~~li~a~~~l~~~-----~~~~l~ivG~g~~~------~~l~~~~~~~~l~-~ 285 (412)
T PRK10307 218 ALRAQLGLPDGKKIVLYSGNIGEKQGLELVIDAARRLRDR-----PDLIFVICGQGGGK------ARLEKMAQCRGLP-N 285 (412)
T ss_pred HHHHHcCCCCCCEEEEEcCccccccCHHHHHHHHHHhccC-----CCeEEEEECCChhH------HHHHHHHHHcCCC-c
Confidence 123457999999999999999999999987543 58999999998643 7788899988886 7
Q ss_pred EEEccCCChhHHHHHHhcCcEEEEcCCCCC----CChHHHHHHHhCCcEEEeCCCCC-ccceecccCCccceeecC--CH
Q 012436 338 VEFYKNLLYRDLVKLLGGAVVGIHSMIDEH----FGISVVEYMAAGAIPIAHNSAGP-KMDIVLEEDGQQTGFLAQ--NA 410 (464)
Q Consensus 338 v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~----~~~~~~Ea~a~G~PvI~~~~~~~-~~~~v~~~~~~~~g~~~~--~~ 410 (464)
|.|+|+++++++.++|++||++++||..|+ +|.+++|||+||+|||+|+.+|. ..+++. ++|++++ |+
T Consensus 286 v~f~G~~~~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~-----~~G~~~~~~d~ 360 (412)
T PRK10307 286 VHFLPLQPYDRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE-----GIGVCVEPESV 360 (412)
T ss_pred eEEeCCCCHHHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh-----CCcEEeCCCCH
Confidence 999999999999999999999999998887 56778999999999999998764 235553 4788875 99
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHH-HccCHHHHHHHHHHHHHHHHhh
Q 012436 411 EEYADAIVKIISMPETERLEMAAAARRRA-ARFSEQRFYEDFKAAIRPILCH 461 (464)
Q Consensus 411 ~~la~~i~~l~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~ 461 (464)
++++++|.++++ |++.++++++++++.+ ++|||+.+++++.++|++++++
T Consensus 361 ~~la~~i~~l~~-~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~ 411 (412)
T PRK10307 361 EALVAAIAALAR-QALLRPKLGTVAREYAERTLDKENVLRQFIADIRGLVAE 411 (412)
T ss_pred HHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhcC
Confidence 999999999999 9999999999999999 7999999999999999998865
|
|
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-41 Score=329.89 Aligned_cols=367 Identities=18% Similarity=0.206 Sum_probs=263.4
Q ss_pred cccccceEEEecC-CCC-CCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeec
Q 012436 30 RRNRTTSVAFFHP-NTN-DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYR 107 (464)
Q Consensus 30 ~~~~~mkI~~~~~-~~~-~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (464)
..+++|||+++.. ... ..||++.++.+++++|.+.|| +|.+++...+. ... ..++ .++....
T Consensus 54 ~~~~~mrI~~~~~~~~~~~~gG~~~~~~~l~~~L~~~G~--eV~vlt~~~~~--~~~------~~g~------~v~~~~~ 117 (465)
T PLN02871 54 SRSRPRRIALFVEPSPFSYVSGYKNRFQNFIRYLREMGD--EVLVVTTDEGV--PQE------FHGA------KVIGSWS 117 (465)
T ss_pred ccCCCceEEEEECCcCCcccccHHHHHHHHHHHHHHCCC--eEEEEecCCCC--Ccc------ccCc------eeeccCC
Confidence 3378899997743 322 337999999999999999995 55555544321 100 0122 1111110
Q ss_pred ccccccccCcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccch---hhhccCceEEEEeeCCcchhhhhhccccc
Q 012436 108 RKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP---LARIFGCRVICYTHYPTISLDMISRVREG 184 (464)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~---~~~~~~~p~v~~~h~p~~~~~~~~~~~~~ 184 (464)
... ..+... ...+.....+.+.+++.+||+||+++....... +++..++|+|++.|.... + +..
T Consensus 118 ~~~---~~~~~~---~~~~~~~~~l~~~i~~~kpDiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~~--~---~~~-- 184 (465)
T PLN02871 118 FPC---PFYQKV---PLSLALSPRIISEVARFKPDLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHVP--V---YIP-- 184 (465)
T ss_pred cCC---ccCCCc---eeeccCCHHHHHHHHhCCCCEEEECCCchhHHHHHHHHHHhCCCEEEEEecCch--h---hhh--
Confidence 000 000000 001111235566788899999997765332222 456789999999993210 0 000
Q ss_pred ccccCCCcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCC-CCCeEEecCCCCCCCCccCCC
Q 012436 185 SSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPL 263 (464)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~-~~~i~~i~~~~d~~~~~~~~~ 263 (464)
.+ . ...... .+..+++...+.+|.++++|+..++.+.+.+.. ..++.++|||+|.+.+.+...
T Consensus 185 --~~---------~----~~~~~~-~~~~~~r~~~~~ad~ii~~S~~~~~~l~~~~~~~~~kv~vi~nGvd~~~f~p~~~ 248 (465)
T PLN02871 185 --RY---------T----FSWLVK-PMWDIIRFLHRAADLTLVTSPALGKELEAAGVTAANRIRVWNKGVDSESFHPRFR 248 (465)
T ss_pred --cc---------c----chhhHH-HHHHHHHHHHhhCCEEEECCHHHHHHHHHcCCCCcCeEEEeCCccCccccCCccc
Confidence 00 0 001111 112345667789999999999999999887533 578999999999887753221
Q ss_pred C---------CCCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCC
Q 012436 264 E---------RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKV 334 (464)
Q Consensus 264 ~---------~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l 334 (464)
. ..++.++|+|+|++.+.||++.++++++.+ |+++|+|+|+|+. .+++++++++
T Consensus 249 ~~~~~~~~~~~~~~~~~i~~vGrl~~~K~~~~li~a~~~~--------~~~~l~ivG~G~~------~~~l~~~~~~--- 311 (465)
T PLN02871 249 SEEMRARLSGGEPEKPLIVYVGRLGAEKNLDFLKRVMERL--------PGARLAFVGDGPY------REELEKMFAG--- 311 (465)
T ss_pred cHHHHHHhcCCCCCCeEEEEeCCCchhhhHHHHHHHHHhC--------CCcEEEEEeCChH------HHHHHHHhcc---
Confidence 1 123567899999999999999999998765 5899999999863 3667776653
Q ss_pred CCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC--CHHH
Q 012436 335 DGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ--NAEE 412 (464)
Q Consensus 335 ~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~--~~~~ 412 (464)
.+|.|+|+++.+|+.++|+.||++|+||..|++|++++|||+||+|||+++.+|. .|++.+...+.+|++++ |+++
T Consensus 312 -~~V~f~G~v~~~ev~~~~~~aDv~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg~-~eiv~~~~~~~~G~lv~~~d~~~ 389 (465)
T PLN02871 312 -TPTVFTGMLQGDELSQAYASGDVFVMPSESETLGFVVLEAMASGVPVVAARAGGI-PDIIPPDQEGKTGFLYTPGDVDD 389 (465)
T ss_pred -CCeEEeccCCHHHHHHHHHHCCEEEECCcccccCcHHHHHHHcCCCEEEcCCCCc-HhhhhcCCCCCceEEeCCCCHHH
Confidence 4799999999999999999999999999999999999999999999999999988 67775422258899885 9999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHH-HHHHHHhh
Q 012436 413 YADAIVKIISMPETERLEMAAAARRRAARFSEQRFYEDFKA-AIRPILCH 461 (464)
Q Consensus 413 la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~-~~~~~~~~ 461 (464)
++++|.++++ |++.++++++++++.+++|+|+.+++++.+ .|++++..
T Consensus 390 la~~i~~ll~-~~~~~~~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~~~ 438 (465)
T PLN02871 390 CVEKLETLLA-DPELRERMGAAAREEVEKWDWRAATRKLRNEQYSAAIWF 438 (465)
T ss_pred HHHHHHHHHh-CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999 999999999999998888999999999998 68887653
|
|
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=325.38 Aligned_cols=371 Identities=18% Similarity=0.129 Sum_probs=263.2
Q ss_pred CCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeecccccccccCcceehhhhch
Q 012436 47 GGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSF 126 (464)
Q Consensus 47 ~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (464)
.||+|+++.+++++|.+.|| +|+++++........ ......+++++++....+.... .........
T Consensus 19 ~GG~e~~v~~la~~L~~~G~--~V~v~~~~~~~~~~~---------~~~~~~~~~v~~~~~~~~~~~~---~~~~~~~~~ 84 (405)
T TIGR03449 19 AGGMNVYILETATELARRGI--EVDIFTRATRPSQPP---------VVEVAPGVRVRNVVAGPYEGLD---KEDLPTQLC 84 (405)
T ss_pred CCCceehHHHHHHHHhhCCC--EEEEEecccCCCCCC---------ccccCCCcEEEEecCCCcccCC---HHHHHHHHH
Confidence 48999999999999999995 555555432111110 0111123345444322211100 000000000
Q ss_pred hhhHHHH-HHhh--hcCCcEEEecccccccch--hhhccCceEEEEeeCCcchhhhhhcccccccccCCCcccccchhhh
Q 012436 127 GSVYLSW-EALC--KFTPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLS 201 (464)
Q Consensus 127 ~~~~~~~-~~l~--~~~~Dvv~~~~~~~~~~~--~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (464)
....... ..++ ..+||+||.+........ +++..++|+|++.|.... +... +.. ...
T Consensus 85 ~~~~~~~~~~~~~~~~~~Diih~h~~~~~~~~~~~~~~~~~p~v~t~h~~~~---~~~~-------~~~--------~~~ 146 (405)
T TIGR03449 85 AFTGGVLRAEARHEPGYYDLIHSHYWLSGQVGWLLRDRWGVPLVHTAHTLAA---VKNA-------ALA--------DGD 146 (405)
T ss_pred HHHHHHHHHHhhccCCCCCeEEechHHHHHHHHHHHHhcCCCEEEeccchHH---HHHH-------hcc--------CCC
Confidence 1111122 2233 347999998764443322 455789999999993210 0000 000 000
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCC-CCCeEEecCCCCCCCCccCCCC-------CCCCCcEEE
Q 012436 202 QCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLE-------RSTEYPAII 273 (464)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~-~~~i~~i~~~~d~~~~~~~~~~-------~~~~~~~i~ 273 (464)
.. ........++..++.+|.++++|+...+.+.+.++. ..++.+||||+|.+.+.+.... ..+++++|+
T Consensus 147 ~~---~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~i~ 223 (405)
T TIGR03449 147 TP---EPEARRIGEQQLVDNADRLIANTDEEARDLVRHYDADPDRIDVVAPGADLERFRPGDRATERARLGLPLDTKVVA 223 (405)
T ss_pred CC---chHHHHHHHHHHHHhcCeEEECCHHHHHHHHHHcCCChhhEEEECCCcCHHHcCCCcHHHHHHhcCCCCCCcEEE
Confidence 00 011122345667899999999999998888877665 5789999999998776532111 123568999
Q ss_pred EEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHHH
Q 012436 274 SVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLL 353 (464)
Q Consensus 274 ~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l 353 (464)
|+|++.+.||++.+++|++.+.+...+ .+++|+++|++... .....+++++.++++++.++|.|+|+++.+++.++|
T Consensus 224 ~~G~l~~~K~~~~li~a~~~l~~~~~~--~~~~l~ivG~~~~~-g~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l 300 (405)
T TIGR03449 224 FVGRIQPLKAPDVLLRAVAELLDRDPD--RNLRVIVVGGPSGS-GLATPDALIELAAELGIADRVRFLPPRPPEELVHVY 300 (405)
T ss_pred EecCCCcccCHHHHHHHHHHHHhhCCC--cceEEEEEeCCCCC-cchHHHHHHHHHHHcCCCceEEECCCCCHHHHHHHH
Confidence 999999999999999999999776521 13999999964321 113347888999999999999999999999999999
Q ss_pred hcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC--CHHHHHHHHHHHHcCCHHHHHHH
Q 012436 354 GGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ--NAEEYADAIVKIISMPETERLEM 431 (464)
Q Consensus 354 ~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~--~~~~la~~i~~l~~~~~~~~~~~ 431 (464)
+.||++++||..|++|++++|||++|+|||+++.++. .+++.+ +.+|++++ |+++++++|.++++ +++.++++
T Consensus 301 ~~ad~~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~~-~e~i~~---~~~g~~~~~~d~~~la~~i~~~l~-~~~~~~~~ 375 (405)
T TIGR03449 301 RAADVVAVPSYNESFGLVAMEAQACGTPVVAARVGGL-PVAVAD---GETGLLVDGHDPADWADALARLLD-DPRTRIRM 375 (405)
T ss_pred HhCCEEEECCCCCCcChHHHHHHHcCCCEEEecCCCc-Hhhhcc---CCceEECCCCCHHHHHHHHHHHHh-CHHHHHHH
Confidence 9999999999999999999999999999999999988 688888 88999886 99999999999999 99999999
Q ss_pred HHHHHHHHHccCHHHHHHHHHHHHHHHHh
Q 012436 432 AAAARRRAARFSEQRFYEDFKAAIRPILC 460 (464)
Q Consensus 432 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 460 (464)
++++++.+++|||+.+++++.++|.+++.
T Consensus 376 ~~~~~~~~~~fsw~~~~~~~~~~y~~~~~ 404 (405)
T TIGR03449 376 GAAAVEHAAGFSWAATADGLLSSYRDALA 404 (405)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHhh
Confidence 99999888889999999999999998764
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-40 Score=321.79 Aligned_cols=377 Identities=17% Similarity=0.136 Sum_probs=253.3
Q ss_pred CCcchhhHHHHHHhhhhCCCCceEEEcccCCCC--chhHHHHHHhhcCcccCCCceeeeeecccccccccCcceehhhhc
Q 012436 48 GGGERVLWCAVKAIQEESPDLDCIVYTGDHDAF--PDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQS 125 (464)
Q Consensus 48 GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (464)
||+++++.+|+++|.+.||-++|.++|...... ...+... ......++++++++.... .+.........
T Consensus 26 GG~~~~v~~La~~L~~~G~~~~V~v~t~~~~~~~~~~~~~~~-----~~~~~~gv~v~r~~~~~~----~~~~~~~~~~~ 96 (439)
T TIGR02472 26 GGQTKYVLELARALARRSEVEQVDLVTRLIKDAKVSPDYAQP-----IERIAPGARIVRLPFGPR----RYLRKELLWPY 96 (439)
T ss_pred CCcchHHHHHHHHHHhCCCCcEEEEEeccccCcCCCCccCCC-----eeEeCCCcEEEEecCCCC----CCcChhhhhhh
Confidence 899999999999999999622556666432100 0010000 011123345555543211 00000000111
Q ss_pred -hhhhHHHHHHhhhc--CCcEEEecccccccch--hhhccCceEEEEeeCCcchhhhhhcccccccccCCCcccccchhh
Q 012436 126 -FGSVYLSWEALCKF--TPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWL 200 (464)
Q Consensus 126 -~~~~~~~~~~l~~~--~~Dvv~~~~~~~~~~~--~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (464)
......+.+.+++. +||+||++...+.... +++..++|+|++.|..... ....+. .. ....
T Consensus 97 ~~~~~~~l~~~~~~~~~~~DvIH~h~~~~~~~~~~~~~~~~~p~V~t~H~~~~~--~~~~~~-------~~-----~~~~ 162 (439)
T TIGR02472 97 LDELADNLLQHLRQQGHLPDLIHAHYADAGYVGARLSRLLGVPLIFTGHSLGRE--KRRRLL-------AA-----GLKP 162 (439)
T ss_pred HHHHHHHHHHHHHHcCCCCCEEEEcchhHHHHHHHHHHHhCCCEEEecccccch--hhhhcc-------cC-----CCCh
Confidence 11123344455543 7999998865443332 4557899999999942210 000000 00 0000
Q ss_pred hHHHHHHH-HHHHHHHHHHhhcCCEEEEcCHHHHH-HHHHHhCC-CCCeEEecCCCCCCCCccCCCC-------------
Q 012436 201 SQCKIVYY-TFFSWMYGLVGSCADLAMVNSSWTQS-HIEKLWGI-PDRIKRVYPPCDTSGLQVLPLE------------- 264 (464)
Q Consensus 201 ~~~~~~~~-~~~~~~~~~~~~~ad~vi~~S~~~~~-~~~~~~~~-~~~i~~i~~~~d~~~~~~~~~~------------- 264 (464)
......+. ......++..++.+|.++++|+.... .+....+. ++++.+||||+|.+.|.+....
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~ki~vIpnGvd~~~f~~~~~~~~~~~~~~~~~~~ 242 (439)
T TIGR02472 163 QQIEKQYNISRRIEAEEETLAHASLVITSTHQEIEEQYALYDSYQPERMQVIPPGVDLSRFYPPQSSEETSEIDNLLAPF 242 (439)
T ss_pred hhhhhhcchHHHHHHHHHHHHhCCEEEECCHHHHHHHHHhccCCCccceEEECCCcChhhcCCCCccccchhHHHHHHhh
Confidence 00011110 00112467788999999999976543 33333233 6789999999999877643211
Q ss_pred -CCCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEE-EEcCCCCCcc-----HHHHHHHHHHHHhcCCCCc
Q 012436 265 -RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQ-FVGSCRNKSD-----EERLQSLKDKSIELKVDGN 337 (464)
Q Consensus 265 -~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~-i~G~~~~~~~-----~~~~~~l~~~~~~~~l~~~ 337 (464)
..++.++++|+||+.+.||++.+++|++.+.... ++.+++ ++|++++.+. .++.+++.++++++++.++
T Consensus 243 ~~~~~~~~i~~vGrl~~~Kg~~~li~A~~~l~~~~----~~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~ 318 (439)
T TIGR02472 243 LKDPEKPPILAISRPDRRKNIPSLVEAYGRSPKLQ----EMANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGK 318 (439)
T ss_pred ccccCCcEEEEEcCCcccCCHHHHHHHHHhChhhh----hhccEEEEeCCccccccccHHHHHHHHHHHHHHHHcCCCce
Confidence 1134578999999999999999999998643221 123333 5687764321 1244567778889999999
Q ss_pred EEEccCCChhHHHHHHhcC----cEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC--CHH
Q 012436 338 VEFYKNLLYRDLVKLLGGA----VVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ--NAE 411 (464)
Q Consensus 338 v~~~g~~~~~~~~~~l~~a----d~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~--~~~ 411 (464)
|.|.|+++.+++.++|+.| |++++||..|+||++++||||||+|||+|+.+|. .|++.+ +.+|++++ |++
T Consensus 319 V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~-~eiv~~---~~~G~lv~~~d~~ 394 (439)
T TIGR02472 319 VAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGGP-RDIIAN---CRNGLLVDVLDLE 394 (439)
T ss_pred EEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCCCCc-HHHhcC---CCcEEEeCCCCHH
Confidence 9999999999999999987 9999999999999999999999999999999998 789988 88999986 999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHH-HccCHHHHHHHHHHHHH
Q 012436 412 EYADAIVKIISMPETERLEMAAAARRRA-ARFSEQRFYEDFKAAIR 456 (464)
Q Consensus 412 ~la~~i~~l~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~ 456 (464)
+++++|.++++ |++.++++++++++.+ ++|||+.+++++.++++
T Consensus 395 ~la~~i~~ll~-~~~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~~ 439 (439)
T TIGR02472 395 AIASALEDALS-DSSQWQLWSRNGIEGVRRHYSWDAHVEKYLRILQ 439 (439)
T ss_pred HHHHHHHHHHh-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 99999999999 9999999999999998 89999999999998763
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-40 Score=319.00 Aligned_cols=355 Identities=21% Similarity=0.217 Sum_probs=263.5
Q ss_pred ceEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeecccccccc
Q 012436 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (464)
Q Consensus 35 mkI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (464)
|||++++. +..||+++++.+++++|.+.||+++|+ +.... ...... ..++ .+.......+
T Consensus 1 mki~~~~~--p~~gG~~~~~~~la~~L~~~G~~v~v~--~~~~~---~~~~~~---~~~~------~~~~~~~~~~---- 60 (371)
T cd04962 1 MKIGIVCY--PTYGGSGVVATELGKALARRGHEVHFI--TSSRP---FRLDEY---SPNI------FFHEVEVPQY---- 60 (371)
T ss_pred CceeEEEE--eCCCCccchHHHHHHHHHhcCCceEEE--ecCCC---cchhhh---ccCe------EEEEeccccc----
Confidence 79999873 345899999999999999999665544 43221 000000 0011 1111111100
Q ss_pred cCcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccch--hhh-c---cCceEEEEeeCCcchhhhhhccccccccc
Q 012436 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LAR-I---FGCRVICYTHYPTISLDMISRVREGSSMY 188 (464)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~--~~~-~---~~~p~v~~~h~p~~~~~~~~~~~~~~~~~ 188 (464)
+.+............+.+.+++.+||+||.+...+.... +++ . .++|+++++|..... ...
T Consensus 61 --~~~~~~~~~~~~~~~l~~~i~~~~~divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~-----~~~------ 127 (371)
T cd04962 61 --PLFQYPPYDLALASKIAEVAKRYKLDLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDIT-----LVG------ 127 (371)
T ss_pred --chhhcchhHHHHHHHHHHHHhcCCccEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCccc-----ccc------
Confidence 000000111223445666788899999997755433222 222 1 389999999943210 000
Q ss_pred CCCcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCCCC----
Q 012436 189 NNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLE---- 264 (464)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~~~---- 264 (464)
. ...+.++.+..++.+|.++++|+..++.+.+.++...++.++|||+|...+......
T Consensus 128 ----------~--------~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~i~vi~n~~~~~~~~~~~~~~~~~ 189 (371)
T cd04962 128 ----------Q--------DPSFQPATRFSIEKSDGVTAVSESLRQETYELFDITKEIEVIPNFVDEDRFRPKPDEALKR 189 (371)
T ss_pred ----------c--------cccchHHHHHHHhhCCEEEEcCHHHHHHHHHhcCCcCCEEEecCCcCHhhcCCCchHHHHH
Confidence 0 001112346667899999999999999998877657789999999988765432211
Q ss_pred ---CCCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEc
Q 012436 265 ---RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFY 341 (464)
Q Consensus 265 ---~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~ 341 (464)
..++.++++++|++.+.||++.+++++..+.++. +++++++|.+++. +.+++.++++++.++|.+.
T Consensus 190 ~~~~~~~~~~il~~g~l~~~K~~~~li~a~~~l~~~~-----~~~l~i~G~g~~~------~~~~~~~~~~~~~~~v~~~ 258 (371)
T cd04962 190 RLGAPEGEKVLIHISNFRPVKRIDDVIRIFAKVRKEV-----PARLLLVGDGPER------SPAERLARELGLQDDVLFL 258 (371)
T ss_pred hcCCCCCCeEEEEecccccccCHHHHHHHHHHHHhcC-----CceEEEEcCCcCH------HHHHHHHHHcCCCceEEEe
Confidence 1245678999999999999999999999987653 7899999998653 6788888889988899999
Q ss_pred cCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC--CHHHHHHHHHH
Q 012436 342 KNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ--NAEEYADAIVK 419 (464)
Q Consensus 342 g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~--~~~~la~~i~~ 419 (464)
|+. +++.++|+.||++++||..|++|++++|||++|+|||+|+.++. .|++.+ +.+|++++ |++++++++.+
T Consensus 259 g~~--~~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~g~PvI~s~~~~~-~e~i~~---~~~G~~~~~~~~~~l~~~i~~ 332 (371)
T cd04962 259 GKQ--DHVEELLSIADLFLLPSEKESFGLAALEAMACGVPVVASNAGGI-PEVVKH---GETGFLVDVGDVEAMAEYALS 332 (371)
T ss_pred cCc--ccHHHHHHhcCEEEeCCCcCCCccHHHHHHHcCCCEEEeCCCCc-hhhhcC---CCceEEcCCCCHHHHHHHHHH
Confidence 987 68999999999999999999999999999999999999999988 788888 88999886 99999999999
Q ss_pred HHcCCHHHHHHHHHHHHHHH-HccCHHHHHHHHHHHHHHH
Q 012436 420 IISMPETERLEMAAAARRRA-ARFSEQRFYEDFKAAIRPI 458 (464)
Q Consensus 420 l~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~ 458 (464)
+++ |++.++++++++++.+ ++|||+.+++++.++|+++
T Consensus 333 l~~-~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~~ 371 (371)
T cd04962 333 LLE-DDELWQEFSRAARNRAAERFDSERIVPQYEALYRRL 371 (371)
T ss_pred HHh-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 999 9999999999999997 8999999999999999863
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=332.26 Aligned_cols=413 Identities=14% Similarity=0.108 Sum_probs=281.6
Q ss_pred ccccccccceEEEecCCCC------------CCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCc--hhHHHH---HH
Q 012436 27 HNARRNRTTSVAFFHPNTN------------DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFP--DSLLAR---AV 89 (464)
Q Consensus 27 ~~~~~~~~mkI~~~~~~~~------------~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~--~~~~~~---~~ 89 (464)
.+..+.++|.|++++.... ..||...++.+||++|.+.|.-++|.++|...+.+. ..+.+. ..
T Consensus 162 ~~~~~~~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~ELAraLa~~~gv~~Vdl~TR~~~~~~~~~~y~~p~e~~~ 241 (1050)
T TIGR02468 162 SDQQKEKKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPTEMLT 241 (1050)
T ss_pred hhhcccCceEEEEEccccCccccCcccCCCCCCCChHHHHHHHHHHHHhCCCCCEEEEEeCCcCccccccccCCcccccc
Confidence 4556678899998863221 128999999999999999863236777777542110 000000 00
Q ss_pred ----hhc--CcccCCCceeeeeecccc---cccccCcceehhhhchhhhHHHHHH----h-h------hcCCcEEEeccc
Q 012436 90 ----DRF--GVELLHPPKVVHLYRRKW---IEESTYPRFTMIGQSFGSVYLSWEA----L-C------KFTPLYYFDTSG 149 (464)
Q Consensus 90 ----~~~--~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~----l-~------~~~~Dvv~~~~~ 149 (464)
+.+ ......++.+++++.... +.. -..|..+..+...+...... + . ...||+||.|..
T Consensus 242 ~~~~~~~~~~~~~~~g~rIvRip~GP~~~~l~K--e~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pDvIHaHyw 319 (1050)
T TIGR02468 242 PRSSENDGDEMGESSGAYIIRIPFGPRDKYIPK--EELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPYVIHGHYA 319 (1050)
T ss_pred ccccccccccccCCCCeEEEEeccCCCCCCcCH--HHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCEEEECcc
Confidence 000 111223446666665322 111 11121222222222111111 1 1 114999999876
Q ss_pred ccccch--hhhccCceEEEEeeCCcchhhhhhcccccccccCCCcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEE
Q 012436 150 YAFTYP--LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMV 227 (464)
Q Consensus 150 ~~~~~~--~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~ 227 (464)
.+.... +++..++|+|+|.|.-.. ......+.... .......... .. ......++.++..||.||+
T Consensus 320 ~sG~aa~~L~~~lgVP~V~T~HSLgr-~K~~~ll~~g~--------~~~~~~~~~y-~~--~~Ri~~Ee~~l~~Ad~VIa 387 (1050)
T TIGR02468 320 DAGDSAALLSGALNVPMVLTGHSLGR-DKLEQLLKQGR--------MSKEEINSTY-KI--MRRIEAEELSLDASEIVIT 387 (1050)
T ss_pred hHHHHHHHHHHhhCCCEEEECccchh-hhhhhhccccc--------cccccccccc-ch--HHHHHHHHHHHHhcCEEEE
Confidence 665544 666899999999995210 00000000000 0000000000 00 1111357888999999999
Q ss_pred cCHHHHHHHHHHhCC-----------------------CCCeEEecCCCCCCCCccCCCC--------------------
Q 012436 228 NSSWTQSHIEKLWGI-----------------------PDRIKRVYPPCDTSGLQVLPLE-------------------- 264 (464)
Q Consensus 228 ~S~~~~~~~~~~~~~-----------------------~~~i~~i~~~~d~~~~~~~~~~-------------------- 264 (464)
.|+..++.....|+. ..++.|||||+|++.|.+....
T Consensus 388 sT~qE~~eq~~lY~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~~~~~ 467 (1050)
T TIGR02468 388 STRQEIEEQWGLYDGFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPDPPIW 467 (1050)
T ss_pred eCHHHHHHHHHHhccCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhcccccccccccchhh
Confidence 999999876666531 2388999999999888743110
Q ss_pred -------CCCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCc-----cHHHHHHHHHHHHhc
Q 012436 265 -------RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKS-----DEERLQSLKDKSIEL 332 (464)
Q Consensus 265 -------~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~-----~~~~~~~l~~~~~~~ 332 (464)
..++++.|+++||+.+.||++.+|+|+..+...... +++. +|+|++++.+ ...+..+++++++++
T Consensus 468 ~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~--~nL~-LIiG~gdd~d~l~~~~~~~l~~L~~li~~l 544 (1050)
T TIGR02468 468 SEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLREL--ANLT-LIMGNRDDIDEMSSGSSSVLTSVLKLIDKY 544 (1050)
T ss_pred HHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccC--CCEE-EEEecCchhhhhhccchHHHHHHHHHHHHh
Confidence 024557899999999999999999999998754311 3555 4668765321 123457789999999
Q ss_pred CCCCcEEEccCCChhHHHHHHhcC----cEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC
Q 012436 333 KVDGNVEFYKNLLYRDLVKLLGGA----VVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ 408 (464)
Q Consensus 333 ~l~~~v~~~g~~~~~~~~~~l~~a----d~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~ 408 (464)
++.++|.|.|+++.+++.++|+.| |+|++||..|+||++++||||||+|||+|+.+|. .|++.+ +.+|++++
T Consensus 545 gL~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~-~EII~~---g~nGlLVd 620 (1050)
T TIGR02468 545 DLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGP-VDIHRV---LDNGLLVD 620 (1050)
T ss_pred CCCCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCc-HHHhcc---CCcEEEEC
Confidence 999999999999999999999988 6999999999999999999999999999999998 799988 89999986
Q ss_pred --CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhh
Q 012436 409 --NAEEYADAIVKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIRPILCH 461 (464)
Q Consensus 409 --~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 461 (464)
|+++++++|.++++ |++.++++++++++.+++|+|+.+++++.+.+..+...
T Consensus 621 P~D~eaLA~AL~~LL~-Dpelr~~m~~~gr~~v~~FSWe~ia~~yl~~i~~~~~~ 674 (1050)
T TIGR02468 621 PHDQQAIADALLKLVA-DKQLWAECRQNGLKNIHLFSWPEHCKTYLSRIASCRPR 674 (1050)
T ss_pred CCCHHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhcc
Confidence 99999999999999 99999999999999998899999999999999887643
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-39 Score=321.49 Aligned_cols=420 Identities=11% Similarity=0.035 Sum_probs=281.8
Q ss_pred HHHHhhhcccccccccceEEEecCCCCCC---CCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHh-----
Q 012436 19 ILILASHVHNARRNRTTSVAFFHPNTNDG---GGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVD----- 90 (464)
Q Consensus 19 ~~~~~~~~~~~~~~~~mkI~~~~~~~~~~---GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~----- 90 (464)
+++=++++.+.+++.+|||+|+..-+.+. ||..-++..|.++|++.| ++|.++++.++.-..........
T Consensus 466 ~~~~~~~~~~~~~~~~mkILfVasE~aP~aKtGGLaDVv~sLPkAL~~~G--hdV~VIlP~Y~~i~~~~~~~~~~~~~~~ 543 (977)
T PLN02939 466 AVENFLKLTLSGTSSGLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKG--HLVEIVLPKYDCMQYDQIRNLKVLDVVV 543 (977)
T ss_pred HHHHHHHhccCCCCCCCEEEEEEcccccccccccHHHHHHHHHHHHHHcC--CeEEEEeCCCcccChhhhhcccccceEE
Confidence 34446688888889999999998766554 899999999999999999 55656666553221110000000
Q ss_pred --hcC-----c----ccCCCceeeeeecc----cccccccCcceehhhhchhhhHHHHHHhhh--cCCcEEEeccccccc
Q 012436 91 --RFG-----V----ELLHPPKVVHLYRR----KWIEESTYPRFTMIGQSFGSVYLSWEALCK--FTPLYYFDTSGYAFT 153 (464)
Q Consensus 91 --~~~-----~----~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~Dvv~~~~~~~~~ 153 (464)
.++ . ....++.++.+... .+.....|....-..++..+...+.+.+.. .+|||||+|.+..+.
T Consensus 544 ~~~~~g~~~~~~v~~~~~~GV~vyfId~~~~~~fF~R~~iYg~~Dn~~RF~~FsrAaLe~~~~~~~~PDIIH~HDW~TaL 623 (977)
T PLN02939 544 ESYFDGNLFKNKIWTGTVEGLPVYFIEPQHPSKFFWRAQYYGEHDDFKRFSYFSRAALELLYQSGKKPDIIHCHDWQTAF 623 (977)
T ss_pred EEeecCceeEEEEEEEEECCeeEEEEecCCchhccCCCCCCCCccHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHH
Confidence 000 0 00112344444311 111111221111112222233344455544 589999999888777
Q ss_pred c-hhhh-------ccCceEEEEeeCCcchhhhhhcccccccccCCCcccccchhhhHHHHH---HHHHHHHHHHHHhhcC
Q 012436 154 Y-PLAR-------IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIV---YYTFFSWMYGLVGSCA 222 (464)
Q Consensus 154 ~-~~~~-------~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~a 222 (464)
+ ++.+ ..++|+|+|+|+-........... .+.+ ... ......... +...+ .+.+..+-+|
T Consensus 624 V~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l----~~lG---L~~-~~l~~~d~le~~~~~~i-N~LK~GIv~A 694 (977)
T PLN02939 624 VAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDL----ASCG---LDV-HQLDRPDRMQDNAHGRI-NVVKGAIVYS 694 (977)
T ss_pred HHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHH----HHcC---CCH-HHccChhhhhhccCCch-HHHHHHHHhC
Confidence 5 3222 356899999994321110000000 0000 000 000000000 00111 1234445679
Q ss_pred CEEEEcCHHHHHHHHHHhC--------C-CCCeEEecCCCCCCCCccCCCC--------------------------CC-
Q 012436 223 DLAMVNSSWTQSHIEKLWG--------I-PDRIKRVYPPCDTSGLQVLPLE--------------------------RS- 266 (464)
Q Consensus 223 d~vi~~S~~~~~~~~~~~~--------~-~~~i~~i~~~~d~~~~~~~~~~--------------------------~~- 266 (464)
|.|+++|+..++.+...+| . ..++.+|+||+|.+.|.+.... .+
T Consensus 695 D~VtTVSptYA~EI~te~G~GL~~~L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~ 774 (977)
T PLN02939 695 NIVTTVSPTYAQEVRSEGGRGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSS 774 (977)
T ss_pred CeeEeeeHHHHHHHHHHhccchHHHhccccCCceEEecceehhhcCCccccccccccChhhhhhhhhhhHHHHHHhCCCc
Confidence 9999999999999876432 1 5788999999999887643210 00
Q ss_pred --CCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCC
Q 012436 267 --TEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNL 344 (464)
Q Consensus 267 --~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~ 344 (464)
++.++|+++||+.+.||++.+++|+..+.. ++++|+|+|+|+.. .+.++++++++++++.++|.|.|..
T Consensus 775 ~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~------~dvqLVIvGdGp~~---~~e~eL~~La~~l~l~drV~FlG~~ 845 (977)
T PLN02939 775 ADASQPLVGCITRLVPQKGVHLIRHAIYKTAE------LGGQFVLLGSSPVP---HIQREFEGIADQFQSNNNIRLILKY 845 (977)
T ss_pred ccccceEEEEeecCCcccChHHHHHHHHHHhh------cCCEEEEEeCCCcH---HHHHHHHHHHHHcCCCCeEEEEecc
Confidence 235789999999999999999999988764 27899999999743 4457888899999988899999999
Q ss_pred ChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccC------CccceeecC--CHHHHHHH
Q 012436 345 LYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEED------GQQTGFLAQ--NAEEYADA 416 (464)
Q Consensus 345 ~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~------~~~~g~~~~--~~~~la~~ 416 (464)
+......+|+.||++++||.+|+||++++|||+||+|+|++++||. .+.|.+.. .+.+|++++ |+++++++
T Consensus 846 de~lah~IYAaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL-~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~A 924 (977)
T PLN02939 846 DEALSHSIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGL-NDSVFDFDDETIPVELRNGFTFLTPDEQGLNSA 924 (977)
T ss_pred CHHHHHHHHHhCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCCC-cceeecCCccccccCCCceEEecCCCHHHHHHH
Confidence 8888889999999999999999999999999999999999999998 67665311 146899886 99999999
Q ss_pred HHHHHc---CCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhh
Q 012436 417 IVKIIS---MPETERLEMAAAARRRAARFSEQRFYEDFKAAIRPILCH 461 (464)
Q Consensus 417 i~~l~~---~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 461 (464)
|.+++. .|++.++++++++.. +.|||+.++++|.++|++++..
T Consensus 925 L~rAL~~~~~dpe~~~~L~~~am~--~dFSWe~~A~qYeeLY~~ll~~ 970 (977)
T PLN02939 925 LERAFNYYKRKPEVWKQLVQKDMN--IDFSWDSSASQYEELYQRAVAR 970 (977)
T ss_pred HHHHHHHhccCHHHHHHHHHHHHH--hcCCHHHHHHHHHHHHHHHHHh
Confidence 988763 178888888876543 7899999999999999998754
|
|
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-38 Score=319.78 Aligned_cols=374 Identities=16% Similarity=0.083 Sum_probs=265.8
Q ss_pred cccc-eEEEecCCCCCCCCcchhhHHHHHHhhhhCC------------CCceEEEcccCCCCchhHHHHHHhhcCcccCC
Q 012436 32 NRTT-SVAFFHPNTNDGGGGERVLWCAVKAIQEESP------------DLDCIVYTGDHDAFPDSLLARAVDRFGVELLH 98 (464)
Q Consensus 32 ~~~m-kI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~------------~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (464)
.++. ||+++.++...| |+|+++.+|+.+|.+.+. ++.|++++.........+..... ..|+
T Consensus 278 ~~~~~rIl~vi~sl~~G-GAEr~~~~La~~l~~~~~~~~~~~g~g~~~~~~V~~~~~~~~~g~~~~~~~L~-~~Gv---- 351 (694)
T PRK15179 278 ESFVGPVLMINGSLGAG-GAERQFVNTAVALQSAIQQGQSIAGYGVLGPVQVVCRSLRSREGADFFAATLA-DAGI---- 351 (694)
T ss_pred CCCcceEEEEeCCCCCC-cHHHHHHHHHHHHHhcccCcccccCccCCCCcEEEEEecccccCcchHHHHHH-hCCC----
Confidence 3556 999999998877 999999999999999854 24566653211101122222221 2243
Q ss_pred Cceeeeeecccccccc----cCcceeh-----hhhchhhhHHHHHHhhhcCCcEEEecccccccch--hhhccCceEEEE
Q 012436 99 PPKVVHLYRRKWIEES----TYPRFTM-----IGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LARIFGCRVICY 167 (464)
Q Consensus 99 ~~~~~~~~~~~~~~~~----~~~~~~~-----~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~--~~~~~~~p~v~~ 167 (464)
++..+......... ....+.. ........+.+.+++++.+|||||++...+..+. .++..++|+|++
T Consensus 352 --~v~~l~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~L~~~lk~~kpDIVH~h~~~a~~lg~lAa~~~gvPvIv~ 429 (694)
T PRK15179 352 --PVSVYSDMQAWGGCEFSSLLAPYREYLRFLPKQIIEGTTKLTDVMRSSVPSVVHIWQDGSIFACALAALLAGVPRIVL 429 (694)
T ss_pred --eEEEeccCCccCcccccccchhhHHHhhhcchhHHHHHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHHcCCCEEEE
Confidence 33333322111000 0000000 0112334567778899999999998776654433 445678998774
Q ss_pred e-eCCcchhhhhhcccccccccCCCcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCC-CCC
Q 012436 168 T-HYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDR 245 (464)
Q Consensus 168 ~-h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~-~~~ 245 (464)
. |.-.. . .........+...+.. .....++.++++|+..++.+.+.++. .++
T Consensus 430 t~h~~~~---~--------------------~~~~~~~~~~~~l~~~---l~~~~~~i~Vs~S~~~~~~l~~~~g~~~~k 483 (694)
T PRK15179 430 SVRTMPP---V--------------------DRPDRYRVEYDIIYSE---LLKMRGVALSSNSQFAAHRYADWLGVDERR 483 (694)
T ss_pred EeCCCcc---c--------------------cchhHHHHHHHHHHHH---HHhcCCeEEEeCcHHHHHHHHHHcCCChhH
Confidence 4 41100 0 0000111111111111 11134567788888888888776666 578
Q ss_pred eEEecCCCCCCCCccCCC----------CCCCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCC
Q 012436 246 IKRVYPPCDTSGLQVLPL----------ERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRN 315 (464)
Q Consensus 246 i~~i~~~~d~~~~~~~~~----------~~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~ 315 (464)
+.+||||+|.+.+.+.+. ....+.++|+++||+.+.||++.+++|+..+.++. |+++|+|+|+|+.
T Consensus 484 I~VI~NGVd~~~f~~~~~~~~~~~~~~~~~~~~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~~----p~~~LvIvG~G~~ 559 (694)
T PRK15179 484 IPVVYNGLAPLKSVQDDACTAMMAQFDARTSDARFTVGTVMRVDDNKRPFLWVEAAQRFAASH----PKVRFIMVGGGPL 559 (694)
T ss_pred EEEECCCcCHHhcCCCchhhHHHHhhccccCCCCeEEEEEEeCCccCCHHHHHHHHHHHHHHC----cCeEEEEEccCcc
Confidence 999999999876642111 11234578999999999999999999999988766 6899999999864
Q ss_pred CccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCcccee
Q 012436 316 KSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIV 395 (464)
Q Consensus 316 ~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v 395 (464)
. ++++++++++++.++|.|.|+. +++..+|+.+|++++||.+|+||++++|||+||+|||+|+.+|. .|++
T Consensus 560 ~------~~L~~l~~~lgL~~~V~flG~~--~dv~~ll~aaDv~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG~-~EiV 630 (694)
T PRK15179 560 L------ESVREFAQRLGMGERILFTGLS--RRVGYWLTQFNAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGA-GEAV 630 (694)
T ss_pred h------HHHHHHHHHcCCCCcEEEcCCc--chHHHHHHhcCEEEeccccccchHHHHHHHHcCCeEEEECCCCh-HHHc
Confidence 3 7899999999999999999998 68999999999999999999999999999999999999999988 7899
Q ss_pred cccCCccceeecC--C--HHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-HccCHHHHHHHHHHHHH
Q 012436 396 LEEDGQQTGFLAQ--N--AEEYADAIVKIISMPETERLEMAAAARRRA-ARFSEQRFYEDFKAAIR 456 (464)
Q Consensus 396 ~~~~~~~~g~~~~--~--~~~la~~i~~l~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~ 456 (464)
.+ +.+|++++ | ++++++++.+++. +......+++++++.+ ++|||+.+++++.++|+
T Consensus 631 ~d---g~~GlLv~~~d~~~~~La~aL~~ll~-~l~~~~~l~~~ar~~a~~~FS~~~~~~~~~~lY~ 692 (694)
T PRK15179 631 QE---GVTGLTLPADTVTAPDVAEALARIHD-MCAADPGIARKAADWASARFSLNQMIASTVRCYQ 692 (694)
T ss_pred cC---CCCEEEeCCCCCChHHHHHHHHHHHh-ChhccHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 98 89999986 4 5689999998887 6666677888999998 89999999999999985
|
|
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-38 Score=308.16 Aligned_cols=369 Identities=20% Similarity=0.207 Sum_probs=251.0
Q ss_pred eEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeeccccccccc
Q 012436 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (464)
Q Consensus 36 kI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (464)
||+|+|++++.. ..+|+++|.+.|| +|.+++......... ++ +++.+..........
T Consensus 1 ~il~~~~~~p~~------~~~la~~L~~~G~--~v~~~~~~~~~~~~~---------~v------~~~~~~~~~~~~~~~ 57 (396)
T cd03818 1 RILFVHQNFPGQ------FRHLAPALAAQGH--EVVFLTEPNAAPPPG---------GV------RVVRYRPPRGPTSGT 57 (396)
T ss_pred CEEEECCCCchh------HHHHHHHHHHCCC--EEEEEecCCCCCCCC---------Ce------eEEEecCCCCCCCCC
Confidence 699999988722 3568999999995 445555433111110 12 333333211111111
Q ss_pred Ccceehhhhch---hhhHHHHHH--hhhcCCcEEEecccccccchhhh-ccCceEEEEeeCCcchhhhhhcccccccccC
Q 012436 116 YPRFTMIGQSF---GSVYLSWEA--LCKFTPLYYFDTSGYAFTYPLAR-IFGCRVICYTHYPTISLDMISRVREGSSMYN 189 (464)
Q Consensus 116 ~~~~~~~~~~~---~~~~~~~~~--l~~~~~Dvv~~~~~~~~~~~~~~-~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~ 189 (464)
++......... ..+...... .+.++||+||++.++...+.+.+ ..++|+|.++|+.... ......+.
T Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdvi~~h~~~~~~~~l~~~~~~~~~v~~~~~~~~~-------~~~~~~~~ 130 (396)
T cd03818 58 HPYLREFEEAVLRGQAVARALLALRAKGFRPDVIVAHPGWGETLFLKDVWPDAPLIGYFEFYYRA-------EGADVGFD 130 (396)
T ss_pred CccchhHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccchhhhHHHhCCCCCEEEEEeeeecC-------CCCCCCCC
Confidence 11111111111 111122222 24468999999988776655555 4679999988742210 00000011
Q ss_pred CCcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCCCCC----
Q 012436 190 NNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLER---- 265 (464)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~~~~---- 265 (464)
... ..........+.........++.+|.+|++|++.++.+.+.+ ..++.+||||+|.+.+.+.+...
T Consensus 131 ~~~------~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~~--~~ki~vI~ngvd~~~f~~~~~~~~~~~ 202 (396)
T cd03818 131 PEF------PPSLDDALRLRNRNALILLALAQADAGVSPTRWQRSTFPAEL--RSRISVIHDGIDTDRLRPDPQARLRLP 202 (396)
T ss_pred CCC------CCchhHHHHHHHhhhHhHHHHHhCCEEECCCHHHHhhCcHhh--ccceEEeCCCccccccCCCchhhhccc
Confidence 000 000000011111112345678999999999999999988766 57899999999998776432211
Q ss_pred -----CCCCcEEEEEec-cCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCC-----C-ccHHHHHHHHHHH-Hhc
Q 012436 266 -----STEYPAIISVAQ-FRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRN-----K-SDEERLQSLKDKS-IEL 332 (464)
Q Consensus 266 -----~~~~~~i~~~G~-~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~-----~-~~~~~~~~l~~~~-~~~ 332 (464)
..+.++++|+|| +.+.||++.+++|+..+.+.. |+++++|+|++.. . ..+.+.+.+.+.. .++
T Consensus 203 ~~~~~~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~----~~~~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 278 (396)
T cd03818 203 NGRVLTPGDEVITFVARNLEPYRGFHVFMRALPRLLRAR----PDARVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRL 278 (396)
T ss_pred ccccCCCCCeEEEEECCCcccccCHHHHHHHHHHHHHHC----CCcEEEEEcCCCcccCCCCCCcccHHHHHHHHhhccc
Confidence 135578999997 999999999999999998775 6999999997421 0 0111222322222 222
Q ss_pred CCCCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC--CH
Q 012436 333 KVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ--NA 410 (464)
Q Consensus 333 ~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~--~~ 410 (464)
+ .++|+|+|++|++++.++|+.||++++||..|++|++++||||||+|||+|+.++. .|++.+ +.+|++++ |+
T Consensus 279 ~-~~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~g~-~e~i~~---~~~G~lv~~~d~ 353 (396)
T cd03818 279 D-LSRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTAPV-REVITD---GENGLLVDFFDP 353 (396)
T ss_pred C-cceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCCCCc-hhhccc---CCceEEcCCCCH
Confidence 2 46899999999999999999999999999999999999999999999999999988 789988 89999986 99
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHH-HccCHHHHHHHHH
Q 012436 411 EEYADAIVKIISMPETERLEMAAAARRRA-ARFSEQRFYEDFK 452 (464)
Q Consensus 411 ~~la~~i~~l~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~ 452 (464)
++++++|.++++ |++.++++++++++.+ ++|||+.++++|.
T Consensus 354 ~~la~~i~~ll~-~~~~~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 354 DALAAAVIELLD-DPARRARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred HHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 999999999999 9999999999999999 7799999999886
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=309.03 Aligned_cols=363 Identities=20% Similarity=0.232 Sum_probs=262.8
Q ss_pred ceEEEecCCCCC--CCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeecccccc
Q 012436 35 TSVAFFHPNTND--GGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIE 112 (464)
Q Consensus 35 mkI~~~~~~~~~--~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (464)
|||+++++++++ .||+++++.+++++|.+. ++++|+++.... . ...++ ++.+... +..
T Consensus 1 mkI~~i~~~~~p~~~GG~~~~v~~l~~~l~~~-~~v~v~~~~~~~------~-----~~~~~------~~~~~~~--~~~ 60 (388)
T TIGR02149 1 MKVTVLTREYPPNVYGGAGVHVEELTRELARL-MDVDVRCFGDQR------F-----DSEGL------TVKGYRP--WSE 60 (388)
T ss_pred CeeEEEecccCccccccHhHHHHHHHHHHHHh-cCeeEEcCCCch------h-----cCCCe------EEEEecC--hhh
Confidence 899999887765 389999999999999987 668877654321 0 00121 2322211 110
Q ss_pred cccCcceehhhhchhhhH-HHHHHhhhcCCcEEEecccccccch--hhhccCceEEEEeeCCcchhhhhhcccccccccC
Q 012436 113 ESTYPRFTMIGQSFGSVY-LSWEALCKFTPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTISLDMISRVREGSSMYN 189 (464)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~Dvv~~~~~~~~~~~--~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~ 189 (464)
. .. ....+.... .........++|+||.+..+..... .++..++|+|++.|...... .+ .
T Consensus 61 ~---~~---~~~~~~~~~~~~~~~~~~~~~divh~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~-----~~------~ 123 (388)
T TIGR02149 61 L---KE---ANKALGTFSVDLAMANDPVDADVVHSHTWYTFLAGHLAKKLYDKPLVVTAHSLEPLR-----PW------K 123 (388)
T ss_pred c---cc---hhhhhhhhhHHHHHhhCCCCCCeEeecchhhhhHHHHHHHhcCCCEEEEeecccccc-----cc------c
Confidence 0 00 001111111 1111122347999998776554333 34467999999999421000 00 0
Q ss_pred CCcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHh-CC-CCCeEEecCCCCCCCCccCCC----
Q 012436 190 NNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLW-GI-PDRIKRVYPPCDTSGLQVLPL---- 263 (464)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~-~~-~~~i~~i~~~~d~~~~~~~~~---- 263 (464)
. ..... .+....++++..++.+|.++++|+..++.+.+.+ +. ..++.++|||+|.+.+.+...
T Consensus 124 ~------~~~~~-----~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~~~i~vi~ng~~~~~~~~~~~~~~~ 192 (388)
T TIGR02149 124 E------EQLGG-----GYKLSSWAEKTAIEAADRVIAVSGGMREDILKYYPDLDPEKVHVIYNGIDTKEYKPDDGNVVL 192 (388)
T ss_pred c------ccccc-----chhHHHHHHHHHHhhCCEEEEccHHHHHHHHHHcCCCCcceEEEecCCCChhhcCCCchHHHH
Confidence 0 00000 0123445678888999999999999999998876 33 578899999999876653211
Q ss_pred ---CCCCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCC-CCcEE
Q 012436 264 ---ERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKV-DGNVE 339 (464)
Q Consensus 264 ---~~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l-~~~v~ 339 (464)
...++.++++|+|++.+.||++.+++|++.+.. +++++++|+++.. .++.+++++.+++++. .+++.
T Consensus 193 ~~~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~~-------~~~l~i~g~g~~~--~~~~~~~~~~~~~~~~~~~~v~ 263 (388)
T TIGR02149 193 DRYGIDRSRPYILFVGRITRQKGVPHLLDAVHYIPK-------DVQVVLCAGAPDT--PEVAEEVRQAVALLDRNRTGII 263 (388)
T ss_pred HHhCCCCCceEEEEEcccccccCHHHHHHHHHHHhh-------cCcEEEEeCCCCc--HHHHHHHHHHHHHhccccCceE
Confidence 112455789999999999999999999998743 7789998877643 2345677777777765 23566
Q ss_pred Ec-cCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC--CH------
Q 012436 340 FY-KNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ--NA------ 410 (464)
Q Consensus 340 ~~-g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~--~~------ 410 (464)
+. |.++.+++.++|+.||++++||..|++|++++|||++|+|||+++.++. .|++.+ +.+|++++ |+
T Consensus 264 ~~~~~~~~~~~~~~~~~aDv~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~~~-~e~i~~---~~~G~~~~~~~~~~~~~~ 339 (388)
T TIGR02149 264 WINKMLPKEELVELLSNAEVFVCPSIYEPLGIVNLEAMACGTPVVASATGGI-PEVVVD---GETGFLVPPDNSDADGFQ 339 (388)
T ss_pred EecCCCCHHHHHHHHHhCCEEEeCCccCCCChHHHHHHHcCCCEEEeCCCCH-HHHhhC---CCceEEcCCCCCcccchH
Confidence 64 6789999999999999999999999999999999999999999999988 788888 88999986 66
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHH-HccCHHHHHHHHHHHHHHHH
Q 012436 411 EEYADAIVKIISMPETERLEMAAAARRRA-ARFSEQRFYEDFKAAIRPIL 459 (464)
Q Consensus 411 ~~la~~i~~l~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~ 459 (464)
++++++|.++++ |++.++++++++++.+ ++|||+.+++++.++|++++
T Consensus 340 ~~l~~~i~~l~~-~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~~ 388 (388)
T TIGR02149 340 AELAKAINILLA-DPELAKKMGIAGRKRAEEEFSWGSIAKKTVEMYRKVL 388 (388)
T ss_pred HHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhC
Confidence 899999999999 9999999999999998 89999999999999998763
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-38 Score=322.13 Aligned_cols=380 Identities=15% Similarity=0.092 Sum_probs=264.9
Q ss_pred cccccceEEEecCCCCCC---CCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHh--hcC--c-------c
Q 012436 30 RRNRTTSVAFFHPNTNDG---GGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVD--RFG--V-------E 95 (464)
Q Consensus 30 ~~~~~mkI~~~~~~~~~~---GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~--~~~--~-------~ 95 (464)
.+..+|||++++.-+.+. ||...++..|+++|++.| ++|.++++.++............ .+. . .
T Consensus 583 ~~~~pM~Il~VSsE~~P~aKvGGLgDVV~sLp~ALa~~G--h~V~VitP~Y~~i~~~~~~~~~~~~~~~~~~~~~~v~~~ 660 (1036)
T PLN02316 583 AKEPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLN--HNVDIILPKYDCLNLSHVKDLHYQRSYSWGGTEIKVWFG 660 (1036)
T ss_pred CCCCCcEEEEEEcccCCCCCcCcHHHHHHHHHHHHHHcC--CEEEEEecCCcccchhhcccceEEEEeccCCEEEEEEEE
Confidence 344669999998655552 899999999999999999 56666666553211100000000 000 0 0
Q ss_pred cCCCceeeeeeccc-cc-ccccCcceehhhhchhhhHHHHHHhhh--cCCcEEEecccccccch-hhh-------ccCce
Q 012436 96 LLHPPKVVHLYRRK-WI-EESTYPRFTMIGQSFGSVYLSWEALCK--FTPLYYFDTSGYAFTYP-LAR-------IFGCR 163 (464)
Q Consensus 96 ~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~Dvv~~~~~~~~~~~-~~~-------~~~~p 163 (464)
..+++.++.+.... +. ....+....-..++..+...+...+.+ .+|||||+|...+...+ +.+ ..++|
T Consensus 661 ~~~GV~vyfl~~~~~~F~r~~~Yg~~Dd~~RF~~F~~Aale~l~~~~~~PDIIHaHDW~talva~llk~~~~~~~~~~~p 740 (1036)
T PLN02316 661 KVEGLSVYFLEPQNGMFWAGCVYGCRNDGERFGFFCHAALEFLLQSGFHPDIIHCHDWSSAPVAWLFKDHYAHYGLSKAR 740 (1036)
T ss_pred EECCcEEEEEeccccccCCCCCCCchhHHHHHHHHHHHHHHHHHhcCCCCCEEEECCChHHHHHHHHHHhhhhhccCCCC
Confidence 11123444443211 11 111111111111122222233333433 58999999987666554 222 24689
Q ss_pred EEEEeeCCcchhhhhhcccccccccCCCcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCC-
Q 012436 164 VICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI- 242 (464)
Q Consensus 164 ~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~- 242 (464)
+|+++|+.. |. . ...+..+..+|.|+++|+..++.+...+..
T Consensus 741 ~V~TiHnl~---------------~~-----------~-----------n~lk~~l~~AD~ViTVS~tya~EI~~~~~l~ 783 (1036)
T PLN02316 741 VVFTIHNLE---------------FG-----------A-----------NHIGKAMAYADKATTVSPTYSREVSGNSAIA 783 (1036)
T ss_pred EEEEeCCcc---------------cc-----------h-----------hHHHHHHHHCCEEEeCCHHHHHHHHhccCcc
Confidence 999999432 00 0 011345689999999999999998775433
Q ss_pred --CCCeEEecCCCCCCCCccCCCC---------------------------C-CCCCcEEEEEeccCCCCChHHHHHHHH
Q 012436 243 --PDRIKRVYPPCDTSGLQVLPLE---------------------------R-STEYPAIISVAQFRPEKAHPLQLEAFS 292 (464)
Q Consensus 243 --~~~i~~i~~~~d~~~~~~~~~~---------------------------~-~~~~~~i~~~G~~~~~K~~~~ll~a~~ 292 (464)
..++.+|+||+|.+.|.+.... . ..+.++++++||+.+.||++.+++|+.
T Consensus 784 ~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~ 863 (1036)
T PLN02316 784 PHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIW 863 (1036)
T ss_pred cccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHH
Confidence 4789999999999876532100 0 124578999999999999999999999
Q ss_pred HHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCC--CCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCCh
Q 012436 293 VALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKV--DGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGI 370 (464)
Q Consensus 293 ~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l--~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~ 370 (464)
.+.+. +++|+|+|+|++. .+.+.++++++++++ +++|.|.|..+......+|+.||++++||.+|+||+
T Consensus 864 ~ll~~------~~qlVIvG~Gpd~---~~e~~l~~La~~Lg~~~~~rV~f~g~~de~lah~iyaaADiflmPS~~EP~GL 934 (1036)
T PLN02316 864 RTLER------NGQVVLLGSAPDP---RIQNDFVNLANQLHSSHHDRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGL 934 (1036)
T ss_pred HHhhc------CcEEEEEeCCCCH---HHHHHHHHHHHHhCccCCCeEEEEecCCHHHHHHHHHhCcEEEeCCcccCccH
Confidence 88653 7899999999753 455788889998865 578999888755555689999999999999999999
Q ss_pred HHHHHHHhCCcEEEeCCCCCccceecccC----------CccceeecC--CHHHHHHHHHHHHcCC-HHHHHHHHHHHHH
Q 012436 371 SVVEYMAAGAIPIAHNSAGPKMDIVLEED----------GQQTGFLAQ--NAEEYADAIVKIISMP-ETERLEMAAAARR 437 (464)
Q Consensus 371 ~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~----------~~~~g~~~~--~~~~la~~i~~l~~~~-~~~~~~~~~~~~~ 437 (464)
+.+|||+||+|+|++++||. .|.|.+.. .+.+|++++ |+++++++|.+++. + ++....+++.+++
T Consensus 935 vqLEAMa~GtppVvs~vGGL-~DtV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~-~~~~~~~~~~~~~r~ 1012 (1036)
T PLN02316 935 TQLTAMRYGSIPVVRKTGGL-FDTVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYALNRAIS-AWYDGRDWFNSLCKR 1012 (1036)
T ss_pred HHHHHHHcCCCeEEEcCCCc-HhhccccccccccccccccCCceEEeCCCCHHHHHHHHHHHHh-hhhhhHHHHHHHHHH
Confidence 99999999999999999999 67776510 025899997 99999999999998 6 3556667888888
Q ss_pred HH-HccCHHHHHHHHHHHHHHHH
Q 012436 438 RA-ARFSEQRFYEDFKAAIRPIL 459 (464)
Q Consensus 438 ~~-~~~s~~~~~~~~~~~~~~~~ 459 (464)
.+ ++|||+..+++|.++|+++.
T Consensus 1013 ~m~~dFSW~~~A~~Y~~LY~~a~ 1035 (1036)
T PLN02316 1013 VMEQDWSWNRPALDYMELYHSAR 1035 (1036)
T ss_pred HHHhhCCHHHHHHHHHHHHHHHh
Confidence 87 88999999999999999875
|
|
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-38 Score=315.14 Aligned_cols=391 Identities=15% Similarity=0.164 Sum_probs=261.3
Q ss_pred ceEEEecCCC--------C--CCCCcchhhHHHHHHh--------hhhCCCC--ceEEEcccCCCC-chhHHHHHHhhcC
Q 012436 35 TSVAFFHPNT--------N--DGGGGERVLWCAVKAI--------QEESPDL--DCIVYTGDHDAF-PDSLLARAVDRFG 93 (464)
Q Consensus 35 mkI~~~~~~~--------~--~~GG~~~~~~~l~~~L--------~~~g~~~--~v~~~~~~~~~~-~~~~~~~~~~~~~ 93 (464)
|||++++... + ..||...++.+++++| ++.|+++ +|.++|...... ...+.+... .
T Consensus 256 ~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~~~~~~~~~~~e---~ 332 (784)
T TIGR02470 256 FNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPDAEGTTCNQRLE---K 332 (784)
T ss_pred ceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCCccccccccccc---c
Confidence 8999886544 1 1289999999999985 6889754 577888754211 111111111 1
Q ss_pred cccCCCceeeeeecccccc---cccCcceehhhhch-hhhHHHHHHhh---hcCCcEEEecccccccch--hhhccCceE
Q 012436 94 VELLHPPKVVHLYRRKWIE---ESTYPRFTMIGQSF-GSVYLSWEALC---KFTPLYYFDTSGYAFTYP--LARIFGCRV 164 (464)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~l~---~~~~Dvv~~~~~~~~~~~--~~~~~~~p~ 164 (464)
+...+++.+.+++.+.... ....++... +..+ .+...+.+.+. ..+||+||++...++... +++..++|.
T Consensus 333 ~~~~~~~~I~rvp~g~~~~~~~~~~i~k~~l-~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~lgVP~ 411 (784)
T TIGR02470 333 VYGTEHAWILRVPFRTENGIILRNWISRFEI-WPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKLGVTQ 411 (784)
T ss_pred ccCCCceEEEEecCCCCcccccccccCHHHH-HHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHhcCCCE
Confidence 1112334566656543110 000111111 1111 11122222222 247999998887665544 677899999
Q ss_pred EEEeeCCcchhhhhhcccccccccCCCcccccchhhhHHHHHHHHHHH-HHHHHHhhcCCEEEEcCHHHHH----HHHHH
Q 012436 165 ICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFS-WMYGLVGSCADLAMVNSSWTQS----HIEKL 239 (464)
Q Consensus 165 v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ad~vi~~S~~~~~----~~~~~ 239 (464)
+.+.|..... .+.. . +..+ ......+....+ ..+..++..||.||+.|..... .+.++
T Consensus 412 v~t~HsL~~~----K~~~--------~----g~~~-~~~e~~~~~~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY 474 (784)
T TIGR02470 412 CTIAHALEKT----KYPD--------S----DIYW-QEFEDKYHFSCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQY 474 (784)
T ss_pred EEECCcchhh----cccc--------c----cccc-ccchhHHHhhhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhhh
Confidence 9999943210 0000 0 0000 000001110000 1245778999999999975533 22111
Q ss_pred -----------h----CC---CCCeEEecCCCCCCCCccCCCC----------------------------CCCCCcEEE
Q 012436 240 -----------W----GI---PDRIKRVYPPCDTSGLQVLPLE----------------------------RSTEYPAII 273 (464)
Q Consensus 240 -----------~----~~---~~~i~~i~~~~d~~~~~~~~~~----------------------------~~~~~~~i~ 273 (464)
+ |+ ..|+.++|||+|.+.|.+.... ..++++.|+
T Consensus 475 ~s~~~ft~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl 554 (784)
T TIGR02470 475 ESHQAFTMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIF 554 (784)
T ss_pred hhcccccccceeeeecCccCCcCCeEEECCCcChhhcCCCCchhhhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEE
Confidence 1 11 4688999999998877543211 023567899
Q ss_pred EEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCC------ccHHHHHHHHHHHHhcCCCCcEEEccCC-Ch
Q 012436 274 SVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNK------SDEERLQSLKDKSIELKVDGNVEFYKNL-LY 346 (464)
Q Consensus 274 ~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~------~~~~~~~~l~~~~~~~~l~~~v~~~g~~-~~ 346 (464)
++||+.+.||++.+++|+.++.... ++++|+|+|++... +.....+++.++++++++.++|.|+|.. +.
T Consensus 555 ~VGRL~~~KGid~LIeA~~~l~~l~----~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~g~V~flG~~~~~ 630 (784)
T TIGR02470 555 SMARLDRVKNLTGLVECYGRSPKLR----ELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLHGQIRWIGAQLNR 630 (784)
T ss_pred EEeCCCccCCHHHHHHHHHHhHhhC----CCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCCCCeEEEccCcCCc
Confidence 9999999999999999998875433 37899999987531 1223567888999999999999999975 55
Q ss_pred hHHHHHHh----cCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC--CHHHHHHHHHHH
Q 012436 347 RDLVKLLG----GAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ--NAEEYADAIVKI 420 (464)
Q Consensus 347 ~~~~~~l~----~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~--~~~~la~~i~~l 420 (464)
.+..++|+ .+|++++||++|+||++++|||+||+|||+|+.||. .|++.+ +.+|++++ |+++++++|.++
T Consensus 631 ~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG~-~EiV~d---g~tGfLVdp~D~eaLA~aL~~l 706 (784)
T TIGR02470 631 VRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGGP-LEIIQD---GVSGFHIDPYHGEEAAEKIVDF 706 (784)
T ss_pred ccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCCH-HHHhcC---CCcEEEeCCCCHHHHHHHHHHH
Confidence 56555554 357999999999999999999999999999999998 799998 89999997 999999999987
Q ss_pred H----cCCHHHHHHHHHHHHHHH-HccCHHHHHHHHHHHH
Q 012436 421 I----SMPETERLEMAAAARRRA-ARFSEQRFYEDFKAAI 455 (464)
Q Consensus 421 ~----~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~ 455 (464)
+ + |++.++++++++++.+ ++|||+.+++++.++.
T Consensus 707 l~kll~-dp~~~~~ms~~a~~rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 707 FEKCDE-DPSYWQKISQGGLQRIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred HHHhcC-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 5 6 9999999999999998 9999999999998765
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-38 Score=305.03 Aligned_cols=283 Identities=22% Similarity=0.292 Sum_probs=230.3
Q ss_pred HHHHHhhhcCCcEEEecccccccch--hhhccCceEEEEeeCCcchhhhhhcccccccccCCCcccccchhhhHHHHHHH
Q 012436 131 LSWEALCKFTPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYY 208 (464)
Q Consensus 131 ~~~~~l~~~~~Dvv~~~~~~~~~~~--~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (464)
...+.+++.+||+||++.+...... +++..++|++++.|........ ...... ..
T Consensus 73 ~~~~~~~~~~~dvvh~~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~--------------------~~~~~~---~~ 129 (367)
T cd05844 73 QLRRLLRRHRPDLVHAHFGFDGVYALPLARRLGVPLVVTFHGFDATTSL--------------------ALLLRS---RW 129 (367)
T ss_pred HHHHHHHhhCCCEEEeccCchHHHHHHHHHHcCCCEEEEEeCccccccc--------------------hhhccc---ch
Confidence 3444678889999998765443322 5668899999999943210000 000000 02
Q ss_pred HHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCCCCCCCCCcEEEEEeccCCCCChHHHH
Q 012436 209 TFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQL 288 (464)
Q Consensus 209 ~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~ll 288 (464)
+.+...++..++.+|.++++|+.+++.+.+....+.++.+++||+|.+.+.+. ....+..+++|+|++.+.||++.++
T Consensus 130 ~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~i~vi~~g~d~~~~~~~--~~~~~~~~i~~~G~~~~~K~~~~li 207 (367)
T cd05844 130 ALYARRRRRLARRAALFIAVSQFIRDRLLALGFPPEKVHVHPIGVDTAKFTPA--TPARRPPRILFVGRFVEKKGPLLLL 207 (367)
T ss_pred hHHHHHHHHHHHhcCEEEECCHHHHHHHHHcCCCHHHeEEecCCCCHHhcCCC--CCCCCCcEEEEEEeeccccChHHHH
Confidence 23344567778999999999999999998863336689999999998776632 2334567899999999999999999
Q ss_pred HHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHHHhcCcEEEEcCC----
Q 012436 289 EAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMI---- 364 (464)
Q Consensus 289 ~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~---- 364 (464)
+|+..+.++. |+++|+++|+++. .+++++.++++++.++|.|.|+++.+++.++|+.||++++||.
T Consensus 208 ~a~~~l~~~~----~~~~l~ivG~g~~------~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~ad~~v~ps~~~~~ 277 (367)
T cd05844 208 EAFARLARRV----PEVRLVIIGDGPL------LAALEALARALGLGGRVTFLGAQPHAEVRELMRRARIFLQPSVTAPS 277 (367)
T ss_pred HHHHHHHHhC----CCeEEEEEeCchH------HHHHHHHHHHcCCCCeEEECCCCCHHHHHHHHHhCCEEEECcccCCC
Confidence 9999998775 6899999998753 3678889999888899999999999999999999999999985
Q ss_pred --CCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC--CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-
Q 012436 365 --DEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ--NAEEYADAIVKIISMPETERLEMAAAARRRA- 439 (464)
Q Consensus 365 --~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~- 439 (464)
.|++|++++|||++|+|||+++.++. .+++.+ +.+|++++ |+++++++|.++++ |++.+++++.++++.+
T Consensus 278 ~~~E~~~~~~~EA~a~G~PvI~s~~~~~-~e~i~~---~~~g~~~~~~d~~~l~~~i~~l~~-~~~~~~~~~~~a~~~~~ 352 (367)
T cd05844 278 GDAEGLPVVLLEAQASGVPVVATRHGGI-PEAVED---GETGLLVPEGDVAALAAALGRLLA-DPDLRARMGAAGRRRVE 352 (367)
T ss_pred CCccCCchHHHHHHHcCCCEEEeCCCCc-hhheec---CCeeEEECCCCHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHH
Confidence 59999999999999999999999988 688887 78999885 99999999999999 9999999999999999
Q ss_pred HccCHHHHHHHHHH
Q 012436 440 ARFSEQRFYEDFKA 453 (464)
Q Consensus 440 ~~~s~~~~~~~~~~ 453 (464)
++|||+.+++++.+
T Consensus 353 ~~~s~~~~~~~l~~ 366 (367)
T cd05844 353 ERFDLRRQTAKLEA 366 (367)
T ss_pred HHCCHHHHHHHHhc
Confidence 89999999998865
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-38 Score=307.23 Aligned_cols=362 Identities=22% Similarity=0.200 Sum_probs=261.5
Q ss_pred CCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeecccccccccCcceehhhhch
Q 012436 47 GGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSF 126 (464)
Q Consensus 47 ~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (464)
.||+++++.+++++|.+.||+|.|+...... ..... ......+.++.+.............+.. ..
T Consensus 20 ~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~--~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 85 (398)
T cd03800 20 TGGQNVYVLELARALARLGHEVDIFTRRIDD--ALPPI---------VELAPGVRVVRVPAGPAEYLPKEELWPY---LD 85 (398)
T ss_pred CCceeehHHHHHHHHhccCceEEEEEecCCc--ccCCc---------cccccceEEEecccccccCCChhhcchh---HH
Confidence 3899999999999999999655544433221 11100 1111122333332211110000000000 01
Q ss_pred hhhHHHHHHhhhc--CCcEEEecccccccch--hhhccCceEEEEeeCCcchhhhhhcccccccccCCCcccccchhhhH
Q 012436 127 GSVYLSWEALCKF--TPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQ 202 (464)
Q Consensus 127 ~~~~~~~~~l~~~--~~Dvv~~~~~~~~~~~--~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (464)
.....+.+.+++. +||+||++........ +++..++|+|++.|.... ... . .....
T Consensus 86 ~~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~------~~~-------~-------~~~~~ 145 (398)
T cd03800 86 EFADDLLRFLRREGGRPDLIHAHYWDSGLVALLLARRLGIPLVHTFHSLGA------VKR-------R-------HLGAA 145 (398)
T ss_pred HHHHHHHHHHHhcCCCccEEEEecCccchHHHHHHhhcCCceEEEeecccc------cCC-------c-------ccccc
Confidence 1233344556666 9999997754433322 566789999999993220 000 0 00000
Q ss_pred HHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCC-CCCeEEecCCCCCCCCccCCC--------CCCCCCcEEE
Q 012436 203 CKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPL--------ERSTEYPAII 273 (464)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~-~~~i~~i~~~~d~~~~~~~~~--------~~~~~~~~i~ 273 (464)
. ..........++.+++.+|.++++|+..++.+.+.++. ..++.+++||+|.+.+..... ....+.++++
T Consensus 146 ~-~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~~vi~ng~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 224 (398)
T cd03800 146 D-TYEPARRIEAEERLLRAADRVIASTPQEAEELYSLYGAYPRRIRVVPPGVDLERFTPYGRAEARRARLLRDPDKPRIL 224 (398)
T ss_pred c-ccchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHHHccccccccEEECCCCCccceecccchhhHHHhhccCCCCcEEE
Confidence 0 00111122345777899999999999999999887765 456899999999876653222 1224568999
Q ss_pred EEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHHH
Q 012436 274 SVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLL 353 (464)
Q Consensus 274 ~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l 353 (464)
|+|++...||++.+++++..+.++. ++++++++|++.......+..+++..++++++.+++.++|+++.+++.++|
T Consensus 225 ~~gr~~~~k~~~~ll~a~~~l~~~~----~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ 300 (398)
T cd03800 225 AVGRLDPRKGIDTLIRAYAELPELR----ERANLVIVGGPRDDILAMDEEELRELARELGVIDRVDFPGRVSREDLPALY 300 (398)
T ss_pred EEcccccccCHHHHHHHHHHHHHhC----CCeEEEEEECCCCcchhhhhHHHHHHHHhcCCCceEEEeccCCHHHHHHHH
Confidence 9999999999999999999998765 589999999987654444456678888889988999999999999999999
Q ss_pred hcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC--CHHHHHHHHHHHHcCCHHHHHHH
Q 012436 354 GGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ--NAEEYADAIVKIISMPETERLEM 431 (464)
Q Consensus 354 ~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~--~~~~la~~i~~l~~~~~~~~~~~ 431 (464)
+.||++++||..|++|++++|||++|+|||+++.++. .+++.+ +.+|++++ |+++++++|.++++ |++.++++
T Consensus 301 ~~adi~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~~-~e~i~~---~~~g~~~~~~~~~~l~~~i~~l~~-~~~~~~~~ 375 (398)
T cd03800 301 RAADVFVNPALYEPFGLTALEAMACGLPVVATAVGGP-RDIVVD---GVTGLLVDPRDPEALAAALRRLLT-DPALRRRL 375 (398)
T ss_pred HhCCEEEecccccccCcHHHHHHhcCCCEEECCCCCH-HHHccC---CCCeEEeCCCCHHHHHHHHHHHHh-CHHHHHHH
Confidence 9999999999999999999999999999999999887 788888 78999886 89999999999999 99999999
Q ss_pred HHHHHHHH-HccCHHHHHHHHH
Q 012436 432 AAAARRRA-ARFSEQRFYEDFK 452 (464)
Q Consensus 432 ~~~~~~~~-~~~s~~~~~~~~~ 452 (464)
++++++.+ ++|||+.+++++.
T Consensus 376 ~~~a~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 376 SRAGLRRARARYTWERVAARLL 397 (398)
T ss_pred HHHHHHHHHHhCCHHHHHHHHh
Confidence 99999999 9999999999875
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=305.24 Aligned_cols=401 Identities=15% Similarity=0.070 Sum_probs=263.2
Q ss_pred ccceEEEecCCCCCC---CCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHH--hhcCcc----------cC
Q 012436 33 RTTSVAFFHPNTNDG---GGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAV--DRFGVE----------LL 97 (464)
Q Consensus 33 ~~mkI~~~~~~~~~~---GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~--~~~~~~----------~~ 97 (464)
++|||+|+..-..+. ||..-++..|.++|++.|| +|.++.+.++.-.... .... ..+... ..
T Consensus 2 ~~~~il~v~~E~~p~~k~ggl~dv~~~lp~~l~~~g~--~v~v~~P~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 78 (485)
T PRK14099 2 TPLRVLSVASEIFPLIKTGGLADVAGALPAALKAHGV--EVRTLVPGYPAVLAGI-EDAEQVHSFPDLFGGPARLLAARA 78 (485)
T ss_pred CCcEEEEEEeccccccCCCcHHHHHHHHHHHHHHCCC--cEEEEeCCCcchhhhh-cCceEEEEEeeeCCceEEEEEEEe
Confidence 569999998766544 8999999999999999995 5555555442111000 0000 001100 00
Q ss_pred CCceeeeeecccccccc--cCc------ceehhhhchhhhHHHHHHh----hhcCCcEEEecccccccch-hhh---ccC
Q 012436 98 HPPKVVHLYRRKWIEES--TYP------RFTMIGQSFGSVYLSWEAL----CKFTPLYYFDTSGYAFTYP-LAR---IFG 161 (464)
Q Consensus 98 ~~~~~~~~~~~~~~~~~--~~~------~~~~~~~~~~~~~~~~~~l----~~~~~Dvv~~~~~~~~~~~-~~~---~~~ 161 (464)
+++.++.+....+.... .+. ...-..++..+...+.+++ .+.+|||||+|..++..++ +.+ ..+
T Consensus 79 ~~v~~~~~~~~~~f~r~~~~y~~~~~~~~~d~~~rf~~f~~a~~~~~~~~~~~~~pDIiH~Hdw~~~l~~~~l~~~~~~~ 158 (485)
T PRK14099 79 GGLDLFVLDAPHLYDRPGNPYVGPDGKDWPDNAQRFAALARAAAAIGQGLVPGFVPDIVHAHDWQAGLAPAYLHYSGRPA 158 (485)
T ss_pred CCceEEEEeChHhhCCCCCCCCCccCCCCCcHHHHHHHHHHHHHHHHhhhccCCCCCEEEECCcHHHHHHHHHHhCCCCC
Confidence 12344444333322211 111 1111112222222333333 3579999999987777666 222 346
Q ss_pred ceEEEEeeCCcchhhhhhcccccccccCCCcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHh-
Q 012436 162 CRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLW- 240 (464)
Q Consensus 162 ~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~- 240 (464)
+|.|+|+|+............ .+.+ ... .........++.. ..+.+..++.||.|+++|+..++.+.+..
T Consensus 159 ~~~V~TiHn~~~qg~~~~~~~----~~~~---~~~-~~~~~~~~~~~~~-~~~~k~~i~~ad~vitVS~~~a~ei~~~~~ 229 (485)
T PRK14099 159 PGTVFTIHNLAFQGQFPRELL----GALG---LPP-SAFSLDGVEYYGG-IGYLKAGLQLADRITTVSPTYALEIQGPEA 229 (485)
T ss_pred CCEEEeCCCCCCCCcCCHHHH----HHcC---CCh-HHcCchhhhhCCC-ccHHHHHHHhcCeeeecChhHHHHHhcccC
Confidence 899999995321100000000 0000 000 0000000000000 02356778999999999999999987532
Q ss_pred C---------CCCCeEEecCCCCCCCCccCCCC----------------------------CCCCCcEEEEEeccCCCCC
Q 012436 241 G---------IPDRIKRVYPPCDTSGLQVLPLE----------------------------RSTEYPAIISVAQFRPEKA 283 (464)
Q Consensus 241 ~---------~~~~i~~i~~~~d~~~~~~~~~~----------------------------~~~~~~~i~~~G~~~~~K~ 283 (464)
+ ...++.+|+||+|.+.|.+.... ..++.+.++++||+.+.||
T Consensus 230 g~gl~~~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~li~~VgRL~~~KG 309 (485)
T PRK14099 230 GMGLDGLLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQARFGLDPDPDALLLGVISRLSWQKG 309 (485)
T ss_pred CcChHHHHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHHHHHcCCCcccCCcEEEEEecCCcccc
Confidence 1 15789999999999877643211 1124578999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcE-EEccCCChhHHHHHH-hcCcEEEE
Q 012436 284 HPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNV-EFYKNLLYRDLVKLL-GGAVVGIH 361 (464)
Q Consensus 284 ~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v-~~~g~~~~~~~~~~l-~~ad~~v~ 361 (464)
++.+++|+..+.+. +++|+++|+|+. .+.+++++++++++ +++ .++|+. +++..+| +.||++++
T Consensus 310 ~d~Li~A~~~l~~~------~~~lvivG~G~~----~~~~~l~~l~~~~~--~~v~~~~G~~--~~l~~~~~a~aDifv~ 375 (485)
T PRK14099 310 LDLLLEALPTLLGE------GAQLALLGSGDA----ELEARFRAAAQAYP--GQIGVVIGYD--EALAHLIQAGADALLV 375 (485)
T ss_pred HHHHHHHHHHHHhc------CcEEEEEecCCH----HHHHHHHHHHHHCC--CCEEEEeCCC--HHHHHHHHhcCCEEEE
Confidence 99999999988653 789999999852 34467777777764 345 789984 8888887 57999999
Q ss_pred cCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccC------CccceeecC--CHHHHHHHHHH---HHcCCHHHHHH
Q 012436 362 SMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEED------GQQTGFLAQ--NAEEYADAIVK---IISMPETERLE 430 (464)
Q Consensus 362 ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~------~~~~g~~~~--~~~~la~~i~~---l~~~~~~~~~~ 430 (464)
||.+|+||++++|||+||+|+|++++||. .|++.+.. +..+|++++ |+++++++|.+ +++ |++.+++
T Consensus 376 PS~~E~fGl~~lEAma~G~ppVvs~~GGl-~d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~ai~~a~~l~~-d~~~~~~ 453 (485)
T PRK14099 376 PSRFEPCGLTQLCALRYGAVPVVARVGGL-ADTVVDANEMAIATGVATGVQFSPVTADALAAALRKTAALFA-DPVAWRR 453 (485)
T ss_pred CCccCCCcHHHHHHHHCCCCcEEeCCCCc-cceeecccccccccCCCceEEeCCCCHHHHHHHHHHHHHHhc-CHHHHHH
Confidence 99999999999999999999999999998 67776510 015899986 99999999987 677 9999999
Q ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHHHHhhcC
Q 012436 431 MAAAARRRAARFSEQRFYEDFKAAIRPILCHAA 463 (464)
Q Consensus 431 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 463 (464)
+++++++ ++|||+.+++++.++|++++..++
T Consensus 454 l~~~~~~--~~fSw~~~a~~y~~lY~~l~~~~~ 484 (485)
T PRK14099 454 LQRNGMT--TDVSWRNPAQHYAALYRSLVAERR 484 (485)
T ss_pred HHHHhhh--hcCChHHHHHHHHHHHHHHHhhhC
Confidence 9998863 789999999999999999887654
|
|
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-38 Score=308.68 Aligned_cols=395 Identities=15% Similarity=0.080 Sum_probs=258.5
Q ss_pred ceEEEecCCCCCC---CCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhh-----cCc----ccCCCcee
Q 012436 35 TSVAFFHPNTNDG---GGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDR-----FGV----ELLHPPKV 102 (464)
Q Consensus 35 mkI~~~~~~~~~~---GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~-----~~~----~~~~~~~~ 102 (464)
|||++++..+.+. ||.+.++..|+++|++.| ++|.++++.++.-.... ...... ..+ ....++++
T Consensus 1 m~i~~vs~e~~P~~k~GGl~~~v~~L~~~L~~~G--~~V~v~~p~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~gv~v 77 (466)
T PRK00654 1 MKILFVASECAPLIKTGGLGDVVGALPKALAALG--HDVRVLLPGYPAIREKL-RDAQVVGRLDLFTVLFGHLEGDGVPV 77 (466)
T ss_pred CeEEEEEcccccCcccCcHHHHHHHHHHHHHHCC--CcEEEEecCCcchhhhh-cCceEEEEeeeEEEEEEeEEcCCceE
Confidence 8999998654332 899999999999999999 55666666542111000 000000 000 01233456
Q ss_pred eeeecccccccc-cCcceehhhhchhhhHHHHHHhhh--cCCcEEEecccccccch-hhh-c-----cCceEEEEeeCCc
Q 012436 103 VHLYRRKWIEES-TYPRFTMIGQSFGSVYLSWEALCK--FTPLYYFDTSGYAFTYP-LAR-I-----FGCRVICYTHYPT 172 (464)
Q Consensus 103 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~--~~~Dvv~~~~~~~~~~~-~~~-~-----~~~p~v~~~h~p~ 172 (464)
+.+....+.... .+.......++......+.+.++. .+||+||+|...+..++ +++ . .++|+|+|+|+..
T Consensus 78 ~~v~~~~~~~~~~~y~~~d~~~r~~~f~~~~~~~~~~~~~~pDiiH~h~w~~~~~~~~l~~~~~~~~~~~~~v~TiH~~~ 157 (466)
T PRK00654 78 YLIDAPHLFDRPSGYGYPDNGERFAFFSWAAAEFAEGLDPRPDIVHAHDWHTGLIPALLKEKYWRGYPDIKTVFTIHNLA 157 (466)
T ss_pred EEEeCHHHcCCCCCCCCcChHHHHHHHHHHHHHHHHhcCCCCceEEECCcHHHHHHHHHHHhhhccCCCCCEEEEcCCCc
Confidence 655543332211 121111111111111222333332 48999999987666555 232 2 3799999999543
Q ss_pred chhhhhhcccccccccCCCcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHH-h--------C-C
Q 012436 173 ISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKL-W--------G-I 242 (464)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~-~--------~-~ 242 (464)
..........+ .. ......+ . ...........+.+..++.+|.++++|+..++.+... + + .
T Consensus 158 ~~g~~~~~~~~----~~---~~~~~~~-~-~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~ei~~~~~~~gl~~~~~~~ 228 (466)
T PRK00654 158 YQGLFPAEILG----EL---GLPAEAF-H-LEGLEFYGQISFLKAGLYYADRVTTVSPTYAREITTPEFGYGLEGLLRAR 228 (466)
T ss_pred CCCcCCHHHHH----Hc---CCChHHc-C-chhhhcCCcccHHHHHHHhcCcCeeeCHHHHHHhccccCCcChHHHHHhc
Confidence 11000000000 00 0000000 0 0000000001234567799999999999999888642 1 1 1
Q ss_pred CCCeEEecCCCCCCCCccCCCC---------------------------CCCCCcEEEEEeccCCCCChHHHHHHHHHHH
Q 012436 243 PDRIKRVYPPCDTSGLQVLPLE---------------------------RSTEYPAIISVAQFRPEKAHPLQLEAFSVAL 295 (464)
Q Consensus 243 ~~~i~~i~~~~d~~~~~~~~~~---------------------------~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~ 295 (464)
..++.+|+||+|.+.+.+.... ..++.++++++||+.+.||++.+++|++++.
T Consensus 229 ~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~ 308 (466)
T PRK00654 229 SGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAENKRALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELL 308 (466)
T ss_pred ccCceEecCCCCccccCCccCcccccccChhhhhchHHHHHHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHH
Confidence 5689999999999987642210 0125679999999999999999999999987
Q ss_pred HHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEE-ccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHH
Q 012436 296 RKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEF-YKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVE 374 (464)
Q Consensus 296 ~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~-~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~E 374 (464)
++ +++|+|+|+|+. .+.+++++++++++ .++.+ .|+ +.+.+..+|+.||++++||.+|+||++++|
T Consensus 309 ~~------~~~lvivG~g~~----~~~~~l~~l~~~~~--~~v~~~~g~-~~~~~~~~~~~aDv~v~PS~~E~~gl~~lE 375 (466)
T PRK00654 309 EQ------GGQLVLLGTGDP----ELEEAFRALAARYP--GKVGVQIGY-DEALAHRIYAGADMFLMPSRFEPCGLTQLY 375 (466)
T ss_pred hc------CCEEEEEecCcH----HHHHHHHHHHHHCC--CcEEEEEeC-CHHHHHHHHhhCCEEEeCCCCCCchHHHHH
Confidence 53 789999998742 34567888888875 35665 455 666678999999999999999999999999
Q ss_pred HHHhCCcEEEeCCCCCccceecccCCc------cceeecC--CHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHccCH
Q 012436 375 YMAAGAIPIAHNSAGPKMDIVLEEDGQ------QTGFLAQ--NAEEYADAIVKIISM--PETERLEMAAAARRRAARFSE 444 (464)
Q Consensus 375 a~a~G~PvI~~~~~~~~~~~v~~~~~~------~~g~~~~--~~~~la~~i~~l~~~--~~~~~~~~~~~~~~~~~~~s~ 444 (464)
||+||+|+|+++.+|. .|++.+ + .+|++++ |+++++++|.++++. +++.+.++++++.+ ++|||
T Consensus 376 Ama~G~p~V~~~~gG~-~e~v~~---~~~~~~~~~G~lv~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~--~~fsw 449 (466)
T PRK00654 376 ALRYGTLPIVRRTGGL-ADTVID---YNPEDGEATGFVFDDFNAEDLLRALRRALELYRQPPLWRALQRQAMA--QDFSW 449 (466)
T ss_pred HHHCCCCEEEeCCCCc-cceeec---CCCCCCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHhc--cCCCh
Confidence 9999999999999998 688877 6 8899986 999999999987641 55667777776643 78999
Q ss_pred HHHHHHHHHHHHHHHh
Q 012436 445 QRFYEDFKAAIRPILC 460 (464)
Q Consensus 445 ~~~~~~~~~~~~~~~~ 460 (464)
+.+++++.++|++++.
T Consensus 450 ~~~a~~~~~lY~~~~~ 465 (466)
T PRK00654 450 DKSAEEYLELYRRLLG 465 (466)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999998864
|
|
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=298.62 Aligned_cols=267 Identities=15% Similarity=0.139 Sum_probs=216.5
Q ss_pred hcCCcEEEecccccccchhhh-ccCceEEEEeeCCcchhhhhhcccccccccCCCcccccchhhhHHHHHHHHHHHHHHH
Q 012436 138 KFTPLYYFDTSGYAFTYPLAR-IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYG 216 (464)
Q Consensus 138 ~~~~Dvv~~~~~~~~~~~~~~-~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (464)
..++|+||.+........+.+ ..+.|++.++|... +.
T Consensus 97 ~~~~~vi~v~~~~~~~~~~~~~~~~~~~v~~~h~~~------------------------------------------~~ 134 (380)
T PRK15484 97 ITKDSVIVIHNSMKLYRQIRERAPQAKLVMHMHNAF------------------------------------------EP 134 (380)
T ss_pred CCCCcEEEEeCcHHhHHHHHhhCCCCCEEEEEeccc------------------------------------------Ch
Confidence 356899987664332222333 56789999999321 01
Q ss_pred HHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCCC-------CCCCCCcEEEEEeccCCCCChHHHHH
Q 012436 217 LVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL-------ERSTEYPAIISVAQFRPEKAHPLQLE 289 (464)
Q Consensus 217 ~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~~-------~~~~~~~~i~~~G~~~~~K~~~~ll~ 289 (464)
..++.++.++++|++.++.+.+.++ ..++.+||||+|.+.+.+... ....+..+++|+|++.+.||++.+++
T Consensus 135 ~~~~~~~~ii~~S~~~~~~~~~~~~-~~~i~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~Li~ 213 (380)
T PRK15484 135 ELLDKNAKIIVPSQFLKKFYEERLP-NADISIVPNGFCLETYQSNPQPNLRQQLNISPDETVLLYAGRISPDKGILLLMQ 213 (380)
T ss_pred hHhccCCEEEEcCHHHHHHHHhhCC-CCCEEEecCCCCHHHcCCcchHHHHHHhCCCCCCeEEEEeccCccccCHHHHHH
Confidence 1235679999999999999988654 678999999999876653211 11235678999999999999999999
Q ss_pred HHHHHHHHhcCCCCCcEEEEEcCCCCC---ccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHHHhcCcEEEEcCC-C
Q 012436 290 AFSVALRKLDADLPRPRLQFVGSCRNK---SDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMI-D 365 (464)
Q Consensus 290 a~~~l~~~~~~~~p~~~l~i~G~~~~~---~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~-~ 365 (464)
|+..+.++. |+++|+++|+++.. +...+.+++++++++++ .++.|.|+++.+++.++|+.||++++||. .
T Consensus 214 A~~~l~~~~----p~~~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~--~~v~~~G~~~~~~l~~~~~~aDv~v~pS~~~ 287 (380)
T PRK15484 214 AFEKLATAH----SNLKLVVVGDPTASSKGEKAAYQKKVLEAAKRIG--DRCIMLGGQPPEKMHNYYPLADLVVVPSQVE 287 (380)
T ss_pred HHHHHHHhC----CCeEEEEEeCCccccccchhHHHHHHHHHHHhcC--CcEEEeCCCCHHHHHHHHHhCCEEEeCCCCc
Confidence 999998766 69999999988643 23356667887877775 57999999999999999999999999996 5
Q ss_pred CCCChHHHHHHHhCCcEEEeCCCCCccceecccCCcccee-ecC--CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-Hc
Q 012436 366 EHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGF-LAQ--NAEEYADAIVKIISMPETERLEMAAAARRRA-AR 441 (464)
Q Consensus 366 e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~-~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~-~~ 441 (464)
|+||++++|||+||+|||+|+.+|. .|++.+ +.+|+ +++ |+++++++|.++++ |++. .++++++++.+ ++
T Consensus 288 E~f~~~~lEAma~G~PVI~s~~gg~-~Eiv~~---~~~G~~l~~~~d~~~la~~I~~ll~-d~~~-~~~~~~ar~~~~~~ 361 (380)
T PRK15484 288 EAFCMVAVEAMAAGKPVLASTKGGI-TEFVLE---GITGYHLAEPMTSDSIISDINRTLA-DPEL-TQIAEQAKDFVFSK 361 (380)
T ss_pred cccccHHHHHHHcCCCEEEeCCCCc-Hhhccc---CCceEEEeCCCCHHHHHHHHHHHHc-CHHH-HHHHHHHHHHHHHh
Confidence 9999999999999999999999988 789988 88998 443 99999999999999 9875 78999999988 99
Q ss_pred cCHHHHHHHHHHHHHHHH
Q 012436 442 FSEQRFYEDFKAAIRPIL 459 (464)
Q Consensus 442 ~s~~~~~~~~~~~~~~~~ 459 (464)
|||+.+++++.++|++..
T Consensus 362 fsw~~~a~~~~~~l~~~~ 379 (380)
T PRK15484 362 YSWEGVTQRFEEQIHNWF 379 (380)
T ss_pred CCHHHHHHHHHHHHHHhc
Confidence 999999999999998754
|
|
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-38 Score=301.24 Aligned_cols=347 Identities=17% Similarity=0.200 Sum_probs=249.4
Q ss_pred ceEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeecccccccc
Q 012436 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (464)
Q Consensus 35 mkI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (464)
|||+++.+..+..||+|+++.+++++|.+.|+++++.++++.... .....+. .+.... .....+.
T Consensus 1 mkI~~~~~~~~~~GG~e~~~~~l~~~L~~~~~g~~v~v~~~~~~~-~~~~~~~----~~~~~~--~~~~~~~-------- 65 (359)
T PRK09922 1 MKIAFIGEAVSGFGGMETVISNVINTFEESKINCEMFFFCRNDKM-DKAWLKE----IKYAQS--FSNIKLS-------- 65 (359)
T ss_pred CeeEEecccccCCCchhHHHHHHHHHhhhcCcceeEEEEecCCCC-ChHHHHh----cchhcc--cccchhh--------
Confidence 899999988766689999999999999999666888887765321 1111111 110000 0000000
Q ss_pred cCcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccch--hhhccCce--EEEEeeCCcchhhhhhcccccccccCC
Q 012436 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LARIFGCR--VICYTHYPTISLDMISRVREGSSMYNN 190 (464)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~--~~~~~~~p--~v~~~h~p~~~~~~~~~~~~~~~~~~~ 190 (464)
.. ........+.+.+++.+||+||++...+..+. +++..+.| ++.+.|....
T Consensus 66 ---~~----~~~~~~~~l~~~l~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~----------------- 121 (359)
T PRK09922 66 ---FL----RRAKHVYNFSKWLKETQPDIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLD----------------- 121 (359)
T ss_pred ---hh----cccHHHHHHHHHHHhcCCCEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCccc-----------------
Confidence 00 00112345557788999999998765443332 33344544 4555562110
Q ss_pred CcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCCCCCCCCCc
Q 012436 191 NASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYP 270 (464)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~~~~~~~~~ 270 (464)
... ... ...++.+|.++++|+..++.+.+.+...+++.++|||+|.+.+.. +.....+++
T Consensus 122 ------~~~-------~~~------~~~~~~~d~~i~~S~~~~~~~~~~~~~~~ki~vi~N~id~~~~~~-~~~~~~~~~ 181 (359)
T PRK09922 122 ------HKK-------HAE------CKKITCADYHLAISSGIKEQMMARGISAQRISVIYNPVEIKTIII-PPPERDKPA 181 (359)
T ss_pred ------ccc-------hhh------hhhhhcCCEEEEcCHHHHHHHHHcCCCHHHEEEEcCCCCHHHccC-CCcccCCCc
Confidence 000 000 011278999999999999999875323668999999999654431 112224468
Q ss_pred EEEEEeccC--CCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCC--h
Q 012436 271 AIISVAQFR--PEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLL--Y 346 (464)
Q Consensus 271 ~i~~~G~~~--~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~--~ 346 (464)
+++|+||+. ..||++.+++++..+. ++++|+++|+|++. +++++.++++++.++|.|+|+++ .
T Consensus 182 ~i~~~Grl~~~~~k~~~~l~~a~~~~~-------~~~~l~ivG~g~~~------~~l~~~~~~~~l~~~v~f~G~~~~~~ 248 (359)
T PRK09922 182 VFLYVGRLKFEGQKNVKELFDGLSQTT-------GEWQLHIIGDGSDF------EKCKAYSRELGIEQRIIWHGWQSQPW 248 (359)
T ss_pred EEEEEEEEecccCcCHHHHHHHHHhhC-------CCeEEEEEeCCccH------HHHHHHHHHcCCCCeEEEecccCCcH
Confidence 899999986 4699999999998773 27899999999753 67889999999999999999884 4
Q ss_pred hHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeC-CCCCccceecccCCccceeecC--CHHHHHHHHHHHHcC
Q 012436 347 RDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHN-SAGPKMDIVLEEDGQQTGFLAQ--NAEEYADAIVKIISM 423 (464)
Q Consensus 347 ~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~-~~~~~~~~v~~~~~~~~g~~~~--~~~~la~~i~~l~~~ 423 (464)
+++.++|+.+|++++||..|+||++++||||||+|||+++ .+|. .|++.+ +.+|++++ |+++++++|.++++
T Consensus 249 ~~~~~~~~~~d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g~-~eiv~~---~~~G~lv~~~d~~~la~~i~~l~~- 323 (359)
T PRK09922 249 EVVQQKIKNVSALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSGP-RDIIKP---GLNGELYTPGNIDEFVGKLNKVIS- 323 (359)
T ss_pred HHHHHHHhcCcEEEECCcccCcChHHHHHHHcCCCEEEeCCCCCh-HHHccC---CCceEEECCCCHHHHHHHHHHHHh-
Confidence 8899999999999999999999999999999999999999 7777 789988 89998875 99999999999999
Q ss_pred CHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHh
Q 012436 424 PETERLEMAAAARRRAARFSEQRFYEDFKAAIRPILC 460 (464)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 460 (464)
|++.+. .....+.+++|+.+.+.+++.+.+..+..
T Consensus 324 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (359)
T PRK09922 324 GEVKYQ--HDAIPNSIERFYEVLYFKNLNNALFSKLQ 358 (359)
T ss_pred CcccCC--HHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 887541 12223334788999999999999988764
|
|
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-37 Score=294.00 Aligned_cols=285 Identities=17% Similarity=0.128 Sum_probs=221.9
Q ss_pred hhhHHHHHHhhhcCCcEEEecccccccch--hhhccCceEEEE-eeC-CcchhhhhhcccccccccCCCcccccchhhhH
Q 012436 127 GSVYLSWEALCKFTPLYYFDTSGYAFTYP--LARIFGCRVICY-THY-PTISLDMISRVREGSSMYNNNASIAQSNWLSQ 202 (464)
Q Consensus 127 ~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~--~~~~~~~p~v~~-~h~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (464)
.....+..++++.+||+||++...+..+. .++..++|++++ .|. +. ....
T Consensus 267 ~~~~~l~~~ir~~rpDIVHt~~~~a~l~g~laA~lagvpviv~~~h~~~~-------------------------~~~~- 320 (578)
T PRK15490 267 YGIKHLVPHLCERKLDYLSVWQDGACLMIALAALIAGVPRIQLGLRGLPP-------------------------VVRK- 320 (578)
T ss_pred HHHHHHHHHHHHcCCCEEEEcCcccHHHHHHHHHhcCCCEEEEeecccCC-------------------------cchh-
Confidence 34566777899999999998877654443 555789999765 441 10 0000
Q ss_pred HHHHHHHHHHHHHH--HHhhcCCEEEEcCHHHHHHHHHHhCC-CCCeEEecCCCCCCCCccCCC-----------CCCCC
Q 012436 203 CKIVYYTFFSWMYG--LVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPL-----------ERSTE 268 (464)
Q Consensus 203 ~~~~~~~~~~~~~~--~~~~~ad~vi~~S~~~~~~~~~~~~~-~~~i~~i~~~~d~~~~~~~~~-----------~~~~~ 268 (464)
+....-+....+ .+.+.+| +++.|...++.+.+.++. ++++.+||||+|.+.|.+... ...++
T Consensus 321 --r~~~~e~~~~~~a~~i~~~sd-~v~~s~~v~~~l~~~lgip~~KI~VIyNGVD~~rf~p~~~~~~~~r~~~~~~l~~~ 397 (578)
T PRK15490 321 --RLFKPEYEPLYQALAVVPGVD-FMSNNHCVTRHYADWLKLEAKHFQVVYNGVLPPSTEPSSEVPHKIWQQFTQKTQDA 397 (578)
T ss_pred --hHHHHHHHHhhhhceeEecch-hhhccHHHHHHHHHHhCCCHHHEEEEeCCcchhhcCccchhhHHHHHHhhhccCCC
Confidence 000010111111 2235556 778899999999887766 678999999999876654211 01234
Q ss_pred CcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhH
Q 012436 269 YPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRD 348 (464)
Q Consensus 269 ~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~ 348 (464)
.++++++|++.+.||+..+++++.++.+.. |+++|+|+|+|+. .+++++.++++++.++|.|.|+. ++
T Consensus 398 ~~vIg~VgRl~~~Kg~~~LI~A~a~llk~~----pdirLvIVGdG~~------~eeLk~la~elgL~d~V~FlG~~--~D 465 (578)
T PRK15490 398 DTTIGGVFRFVGDKNPFAWIDFAARYLQHH----PATRFVLVGDGDL------RAEAQKRAEQLGILERILFVGAS--RD 465 (578)
T ss_pred CcEEEEEEEEehhcCHHHHHHHHHHHHhHC----CCeEEEEEeCchh------HHHHHHHHHHcCCCCcEEECCCh--hh
Confidence 578999999999999999999999887765 6999999999864 37899999999999999999996 89
Q ss_pred HHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC--CHHHHHHHH---HHHHcC
Q 012436 349 LVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ--NAEEYADAI---VKIISM 423 (464)
Q Consensus 349 ~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~--~~~~la~~i---~~l~~~ 423 (464)
+..+|+.+|++++||.+|+||++++|||++|+|||+|+.+|. .|++.+ +.+|++++ |++++++++ ..+.+
T Consensus 466 v~~~LaaADVfVlPS~~EGfp~vlLEAMA~GlPVVATdvGG~-~EiV~d---G~nG~LVp~~D~~aLa~ai~lA~aL~~- 540 (578)
T PRK15490 466 VGYWLQKMNVFILFSRYEGLPNVLIEAQMVGVPVISTPAGGS-AECFIE---GVSGFILDDAQTVNLDQACRYAEKLVN- 540 (578)
T ss_pred HHHHHHhCCEEEEcccccCccHHHHHHHHhCCCEEEeCCCCc-HHHccc---CCcEEEECCCChhhHHHHHHHHHHHHH-
Confidence 999999999999999999999999999999999999999998 788888 89999987 777887776 44444
Q ss_pred CHHHHHHHHHHHHHHH-HccCHHHHHHHHHHHHHH
Q 012436 424 PETERLEMAAAARRRA-ARFSEQRFYEDFKAAIRP 457 (464)
Q Consensus 424 ~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~ 457 (464)
+.+....+++++++.+ ++|||+.++++|.++|..
T Consensus 541 ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 541 LWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred HHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 5555667889999999 899999999999999875
|
|
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-37 Score=295.12 Aligned_cols=373 Identities=13% Similarity=0.084 Sum_probs=238.7
Q ss_pred ceEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeecccccccc
Q 012436 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (464)
Q Consensus 35 mkI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (464)
|||+++...++.| |+|+.+.+|++.|.+.||++++....+...... .. ....+.......++....
T Consensus 1 mkil~i~~~l~~G-Gaeri~~~L~~~l~~~G~~~~i~~~~~~~~~~~-~~------------~~~~~~~~~~~~~~~~~~ 66 (405)
T PRK10125 1 MNILQFNVRLAEG-GAAGVALDLHQRALQQGLASHFVYGYGKGGKES-VS------------HQNYPQVIKHTPRMTAMA 66 (405)
T ss_pred CeEEEEEeeecCC-chhHHHHHHHHHHHhcCCeEEEEEecCCCcccc-cc------------cCCcceEEEecccHHHHH
Confidence 8999998877665 999999999999999998888766654421110 00 000000000001110000
Q ss_pred cCcceehh-hhchhhhHHHHHHh-hhcCCcEEEecccccccch---h--------hhccCceEEEEeeCCcchhhhhhcc
Q 012436 115 TYPRFTMI-GQSFGSVYLSWEAL-CKFTPLYYFDTSGYAFTYP---L--------ARIFGCRVICYTHYPTISLDMISRV 181 (464)
Q Consensus 115 ~~~~~~~~-~~~~~~~~~~~~~l-~~~~~Dvv~~~~~~~~~~~---~--------~~~~~~p~v~~~h~p~~~~~~~~~~ 181 (464)
.....+.. ...+.....+.+.+ ++++|||||.|..+...+. + .+..++|+|+|+|.-...+-...+
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~pDviHlH~~~~~~~~~~~l~~~~~~~~~~~~~~piV~TlHd~~~~tg~c~~- 145 (405)
T PRK10125 67 NIALFRLFNRDLFGNFNELYRTITRTPGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAF- 145 (405)
T ss_pred HHHHHHhcchhhcchHHHHHHHHhhccCCCEEEEecccCceecHHHHHHHHhhhhcccCCCCEEEecccccccCCCcCC-
Confidence 00000000 11223445555556 6789999997766553221 1 224578999999932211100000
Q ss_pred cccccccCC---Cc-ccccc-hhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCC
Q 012436 182 REGSSMYNN---NA-SIAQS-NWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTS 256 (464)
Q Consensus 182 ~~~~~~~~~---~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~ 256 (464)
...+..|.. .. ..... ..........+.......+.+.+.++.+|++|++.++.+.+.++ ..++.+||||+|.+
T Consensus 146 ~~~C~~~~~~c~~Cp~l~~~~~~~~d~~~~~~~~k~~~~~~~~~~~~~iV~~S~~l~~~~~~~~~-~~~i~vI~NGid~~ 224 (405)
T PRK10125 146 TDGCEGWKTGCQKCPTLNNYPPVKVDRAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSLYG-PGRCRIINNGIDMA 224 (405)
T ss_pred CcccccccccCCCCCCccCCCCCccchHHHHHHHHHHHHHHHhhcCcEEEEcCHHHHHHHHHHcC-CCCEEEeCCCcCcc
Confidence 001111110 00 00000 00011111111122223344456788999999999999987766 57899999999964
Q ss_pred CCccC----CCCCCCCCcEEEEEecc--CCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHH
Q 012436 257 GLQVL----PLERSTEYPAIISVAQF--RPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSI 330 (464)
Q Consensus 257 ~~~~~----~~~~~~~~~~i~~~G~~--~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~ 330 (464)
.+... +....++++.++++|+. .+.||++.+++|+..+. ++++|+++|.++.. .
T Consensus 225 ~~~~~~~~~~~~~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~-------~~~~L~ivG~g~~~------~------- 284 (405)
T PRK10125 225 TEAILAELPPVRETQGKPKIAVVAHDLRYDGKTDQQLVREMMALG-------DKIELHTFGKFSPF------T------- 284 (405)
T ss_pred cccccccccccccCCCCCEEEEEEeccccCCccHHHHHHHHHhCC-------CCeEEEEEcCCCcc------c-------
Confidence 32211 11123456789999984 46799999999998762 37899999987521 0
Q ss_pred hcCCCCcEEEccCC-ChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC-
Q 012436 331 ELKVDGNVEFYKNL-LYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ- 408 (464)
Q Consensus 331 ~~~l~~~v~~~g~~-~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~- 408 (464)
.+++.++|+. +.+++.++|++||++++||..|+||++++||||||+|||+|+.||. +|++.+ .+|++++
T Consensus 285 ----~~~v~~~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G~PVVat~~gG~-~Eiv~~----~~G~lv~~ 355 (405)
T PRK10125 285 ----AGNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAA-REVLQK----SGGKTVSE 355 (405)
T ss_pred ----ccceEEecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHcCCCEEEeCCCCh-HHhEeC----CcEEEECC
Confidence 2468888987 5689999999999999999999999999999999999999999998 788877 4899987
Q ss_pred -CHHHHHHHHHHHHcCCHHHHHH----HHHHHHHHH-HccCHHHHHHHHHHHHHHH
Q 012436 409 -NAEEYADAIVKIISMPETERLE----MAAAARRRA-ARFSEQRFYEDFKAAIRPI 458 (464)
Q Consensus 409 -~~~~la~~i~~l~~~~~~~~~~----~~~~~~~~~-~~~s~~~~~~~~~~~~~~~ 458 (464)
|++++++++ +++..++ +..++++.+ ++||++.+++++.++|+++
T Consensus 356 ~d~~~La~~~------~~~~~~~~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~~l 405 (405)
T PRK10125 356 EEVLQLAQLS------KPEIAQAVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQNL 405 (405)
T ss_pred CCHHHHHhcc------CHHHHHHhhhhHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 999999854 4333332 234577777 8899999999999999863
|
|
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-37 Score=301.78 Aligned_cols=394 Identities=16% Similarity=0.131 Sum_probs=263.4
Q ss_pred cccceEEEecCCCCCC---CCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhH--HHHH--HhhcCcccC-------
Q 012436 32 NRTTSVAFFHPNTNDG---GGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSL--LARA--VDRFGVELL------- 97 (464)
Q Consensus 32 ~~~mkI~~~~~~~~~~---GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~--~~~~--~~~~~~~~~------- 97 (464)
++.|||+++..-..+. ||..-++..|.++|++.| ++|.++.+.+..-.... .... ...+.+.+.
T Consensus 3 ~~~~~il~v~~E~~p~~k~Ggl~dv~~~Lp~al~~~g--~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (489)
T PRK14098 3 RRNFKVLYVSGEVSPFVRVSALADFMASFPQALEEEG--FEARIMMPKYGTINDRKFRLHDVLRLSDIEVPLKEKTDLLH 80 (489)
T ss_pred CCCcEEEEEeecchhhcccchHHHHHHHHHHHHHHCC--CeEEEEcCCCCchhhhhhccccceEEEEEEEeecCeeEEEE
Confidence 3449999998765544 899999999999999999 55556565542111100 0000 000111000
Q ss_pred --------CCceeeeeecccccccc-cCcc-------eehhhhchhhhHHHHHHhhh--cCCcEEEecccccccch-hhh
Q 012436 98 --------HPPKVVHLYRRKWIEES-TYPR-------FTMIGQSFGSVYLSWEALCK--FTPLYYFDTSGYAFTYP-LAR 158 (464)
Q Consensus 98 --------~~~~~~~~~~~~~~~~~-~~~~-------~~~~~~~~~~~~~~~~~l~~--~~~Dvv~~~~~~~~~~~-~~~ 158 (464)
.+++++.+....+..+. .+.. ..-..++......+.+.+++ .+|||||+|..++...+ +.+
T Consensus 81 ~~~~~~~~~~v~~~~~~~~~~f~r~~~y~~~~~g~~~~d~~~rf~~f~~a~l~~~~~~~~~pDiiH~hdw~t~l~~~~l~ 160 (489)
T PRK14098 81 VKVTALPSSKIQTYFLYNEKYFKRNGLFTDMSLGGDLKGSAEKVIFFNVGVLETLQRLGWKPDIIHCHDWYAGLVPLLLK 160 (489)
T ss_pred EEEecccCCCceEEEEeCHHHcCCCCcCCCCccCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCEEEecCcHHHHHHHHHH
Confidence 01233333222221111 1110 01111222222333444443 58999999987766665 222
Q ss_pred -c-------cCceEEEEeeCCcchhhhhhcccccccccCCCcccccchhhhHH-HHHHHHH-----HHHHHHHHhhcCCE
Q 012436 159 -I-------FGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQC-KIVYYTF-----FSWMYGLVGSCADL 224 (464)
Q Consensus 159 -~-------~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~~~ad~ 224 (464)
. .++|+|+|+|+... .+... ...+.... ....... ...+.+..+..||.
T Consensus 161 ~~~~~~~~~~~~~~V~TiHn~~~---------------qg~~~--~~~~~~~~~~~~~~~~~~~~~~~n~lk~~i~~ad~ 223 (489)
T PRK14098 161 TVYADHEFFKDIKTVLTIHNVYR---------------QGVLP--FKVFQKLLPEEVCSGLHREGDEVNMLYTGVEHADL 223 (489)
T ss_pred HHhhhccccCCCCEEEEcCCCcc---------------cCCCC--HHHHHHhCCHHhhhhhhhcCCcccHHHHHHHhcCc
Confidence 2 37999999995321 00000 00000000 0000000 01345667899999
Q ss_pred EEEcCHHHHHHHHHH----hCC-------CCCeEEecCCCCCCCCccCCCC----------------------------C
Q 012436 225 AMVNSSWTQSHIEKL----WGI-------PDRIKRVYPPCDTSGLQVLPLE----------------------------R 265 (464)
Q Consensus 225 vi~~S~~~~~~~~~~----~~~-------~~~i~~i~~~~d~~~~~~~~~~----------------------------~ 265 (464)
|+++|+..++.+... ++. ..++.+|+||+|.+.+.+.... .
T Consensus 224 VitVS~~~a~ei~~~~~~~~gl~~~l~~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~~~k~~~k~~l~~~lgl~~ 303 (489)
T PRK14098 224 LTTTSPRYAEEIAGDGEEAFGLDKVLEERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERLDGKLENKKALLEEVGLPF 303 (489)
T ss_pred ceeeCHHHHHHhCcCCCCCcChHHHHHhcCCCeeEEeCCccccccCCcccccccccCCcchhhhHHHHHHHHHHHhCCCC
Confidence 999999999988752 121 4789999999999887643211 0
Q ss_pred CCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCC
Q 012436 266 STEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLL 345 (464)
Q Consensus 266 ~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~ 345 (464)
.++.+.++++||+.+.||++.+++|+..+.+. +++|+|+|+|+. .+.++++++++++ +++|.+.|.++
T Consensus 304 ~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~------~~~lvivG~G~~----~~~~~l~~l~~~~--~~~V~~~g~~~ 371 (489)
T PRK14098 304 DEETPLVGVIINFDDFQGAELLAESLEKLVEL------DIQLVICGSGDK----EYEKRFQDFAEEH--PEQVSVQTEFT 371 (489)
T ss_pred ccCCCEEEEeccccccCcHHHHHHHHHHHHhc------CcEEEEEeCCCH----HHHHHHHHHHHHC--CCCEEEEEecC
Confidence 13457999999999999999999999998752 799999999853 3457888888876 46899999999
Q ss_pred hhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccC-CccceeecC--CHHHHHHHHHHHH-
Q 012436 346 YRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEED-GQQTGFLAQ--NAEEYADAIVKII- 421 (464)
Q Consensus 346 ~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~-~~~~g~~~~--~~~~la~~i~~l~- 421 (464)
++++..+|+.||++++||..|++|++.+|||+||+|+|+++.||. .|.+.+.. .+.+|++++ |+++++++|.+++
T Consensus 372 ~~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl-~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~ 450 (489)
T PRK14098 372 DAFFHLAIAGLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGI-VETIEEVSEDKGSGFIFHDYTPEALVAKLGEALA 450 (489)
T ss_pred HHHHHHHHHhCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCC-ceeeecCCCCCCceeEeCCCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998 56664211 157899986 9999999998865
Q ss_pred --cCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHh
Q 012436 422 --SMPETERLEMAAAARRRAARFSEQRFYEDFKAAIRPILC 460 (464)
Q Consensus 422 --~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 460 (464)
+ |++.++++++++.+ ++|||+..++++.++|++++.
T Consensus 451 ~~~-~~~~~~~~~~~~~~--~~fsw~~~a~~y~~lY~~~~~ 488 (489)
T PRK14098 451 LYH-DEERWEELVLEAME--RDFSWKNSAEEYAQLYRELLG 488 (489)
T ss_pred HHc-CHHHHHHHHHHHhc--CCCChHHHHHHHHHHHHHHhc
Confidence 5 77777777665532 789999999999999998764
|
|
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-37 Score=305.57 Aligned_cols=395 Identities=15% Similarity=0.109 Sum_probs=262.1
Q ss_pred ceEEEecCCCCC---CCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHH--HHhhcCc-------------cc
Q 012436 35 TSVAFFHPNTND---GGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLAR--AVDRFGV-------------EL 96 (464)
Q Consensus 35 mkI~~~~~~~~~---~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~--~~~~~~~-------------~~ 96 (464)
|||++++.-+.+ .||...++..|+++|++.| ++|.++++.++......... ......+ ..
T Consensus 1 m~i~~vs~E~~P~~k~GGl~~~v~~L~~aL~~~G--~~v~v~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (473)
T TIGR02095 1 MRVLFVAAEMAPFAKTGGLADVVGALPKALAALG--HDVRVLLPAYGCIEDEVDDQVKVVELVDLSVGPRTLYVKVFEGV 78 (473)
T ss_pred CeEEEEEeccccccCcCcHHHHHHHHHHHHHHcC--CeEEEEecCCcChhhhhccCeEEEEEEEEeecCceeEEEEEEEE
Confidence 899999876444 3899999999999999999 55556666543211110000 0000000 11
Q ss_pred CCCceeeeeeccccccc--ccCc--ceehhhhchhhhHHHHHHhh--hcCCcEEEecccccccch--hhhccC---ceEE
Q 012436 97 LHPPKVVHLYRRKWIEE--STYP--RFTMIGQSFGSVYLSWEALC--KFTPLYYFDTSGYAFTYP--LARIFG---CRVI 165 (464)
Q Consensus 97 ~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~l~--~~~~Dvv~~~~~~~~~~~--~~~~~~---~p~v 165 (464)
.++++++.+....+... ..+. ......++......+.+.++ ..+||+||++..++..++ +++..+ +|+|
T Consensus 79 ~~~v~~~~i~~~~~~~r~~~~y~~~~~d~~~r~~~f~~a~~~~~~~~~~~~DiiH~hdw~~~~~~~~l~~~~~~~~~~~v 158 (473)
T TIGR02095 79 VEGVPVYFIDNPSLFDRPGGIYGDDYPDNAERFAFFSRAAAELLSGLGWQPDVVHAHDWHTALVPALLKAVYRPNPIKTV 158 (473)
T ss_pred ECCceEEEEECHHHcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCEEEECCcHHHHHHHHHHhhccCCCCCEE
Confidence 12334554443322211 0121 11111112222233333343 368999999887666555 333443 9999
Q ss_pred EEeeCCcchhhhhhcccccccccCCCcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHH-hC---
Q 012436 166 CYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKL-WG--- 241 (464)
Q Consensus 166 ~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~-~~--- 241 (464)
+++|+............. ..+ ... .... .......-...+.+..++.||.++++|+..++.+... ++
T Consensus 159 ~TiH~~~~~g~~~~~~~~----~~~---~~~-~~~~-~~~~~~~~~~~~~k~~~~~ad~v~tVS~~~~~ei~~~~~~~~l 229 (473)
T TIGR02095 159 FTIHNLAYQGVFPADDFS----ELG---LPP-EYFH-MEGLEFYGRVNFLKGGIVYADRVTTVSPTYAREILTPEFGYGL 229 (473)
T ss_pred EEcCCCccCCcCCHHHHH----HcC---CCh-HHcC-chhhhcCCchHHHHHHHHhCCcCeecCHhHHHHhcCCcCCccc
Confidence 999954311000000000 000 000 0000 0000000011245677899999999999998888642 11
Q ss_pred ------CCCCeEEecCCCCCCCCccCCCC----------------------------CCCCCcEEEEEeccCCCCChHHH
Q 012436 242 ------IPDRIKRVYPPCDTSGLQVLPLE----------------------------RSTEYPAIISVAQFRPEKAHPLQ 287 (464)
Q Consensus 242 ------~~~~i~~i~~~~d~~~~~~~~~~----------------------------~~~~~~~i~~~G~~~~~K~~~~l 287 (464)
.+.++.+|+||+|.+.+.+.... ..++.+.++|+||+.+.||++.+
T Consensus 230 ~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~l 309 (473)
T TIGR02095 230 DGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLL 309 (473)
T ss_pred hhHHHhcCCCeEEEeCCCCccccCCCCCcccccCcCccchhhhhhhHHHHHHHcCCCccCCCCEEEEEecCccccChHHH
Confidence 14689999999999877642110 01256899999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHHHhcCcEEEEcCCCCC
Q 012436 288 LEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEH 367 (464)
Q Consensus 288 l~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~ 367 (464)
++|+..+.+. +++|+|+|+|+. .+.+++++++++++ .++.+.+..+.+++..+|+.||++++||..|+
T Consensus 310 i~a~~~l~~~------~~~lvi~G~g~~----~~~~~l~~~~~~~~--~~v~~~~~~~~~~~~~~~~~aDv~l~pS~~E~ 377 (473)
T TIGR02095 310 LAALPELLEL------GGQLVVLGTGDP----ELEEALRELAERYP--GNVRVIIGYDEALAHLIYAGADFILMPSRFEP 377 (473)
T ss_pred HHHHHHHHHc------CcEEEEECCCCH----HHHHHHHHHHHHCC--CcEEEEEcCCHHHHHHHHHhCCEEEeCCCcCC
Confidence 9999998764 699999999852 34567777777654 57888888888899999999999999999999
Q ss_pred CChHHHHHHHhCCcEEEeCCCCCccceecccCCc------cceeecC--CHHHHHHHHHHHHcC---CHHHHHHHHHHHH
Q 012436 368 FGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQ------QTGFLAQ--NAEEYADAIVKIISM---PETERLEMAAAAR 436 (464)
Q Consensus 368 ~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~------~~g~~~~--~~~~la~~i~~l~~~---~~~~~~~~~~~~~ 436 (464)
+|++++|||+||+|||+++.+|. .|++.+ + .+|++++ |+++++++|.+++.+ +++.++++++++.
T Consensus 378 ~gl~~lEAma~G~pvI~s~~gg~-~e~v~~---~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~ 453 (473)
T TIGR02095 378 CGLTQLYAMRYGTVPIVRRTGGL-ADTVVD---GDPEAESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEALQKNAM 453 (473)
T ss_pred cHHHHHHHHHCCCCeEEccCCCc-cceEec---CCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh
Confidence 99999999999999999999998 788877 6 8999886 999999999987751 6777788887765
Q ss_pred HHHHccCHHHHHHHHHHHHHHH
Q 012436 437 RRAARFSEQRFYEDFKAAIRPI 458 (464)
Q Consensus 437 ~~~~~~s~~~~~~~~~~~~~~~ 458 (464)
+ ++|||+.+++++.++|+++
T Consensus 454 ~--~~fsw~~~a~~~~~~Y~~l 473 (473)
T TIGR02095 454 S--QDFSWDKSAKQYVELYRSL 473 (473)
T ss_pred c--cCCCcHHHHHHHHHHHHhC
Confidence 3 7899999999999999863
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-37 Score=293.08 Aligned_cols=341 Identities=19% Similarity=0.192 Sum_probs=259.7
Q ss_pred eEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeeccccccccc
Q 012436 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (464)
Q Consensus 36 kI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (464)
||+++++.++. |+++++.+++++|.+.||++.++....... .... ... ..... .+ .+.
T Consensus 1 ki~~~~~~~~~--~~~~~~~~~~~~L~~~g~~v~v~~~~~~~~--~~~~-~~~-----~~~~~--~~------~~~---- 58 (355)
T cd03799 1 KIAYLVKEFPR--LSETFILREILALEAAGHEVEIFSLRPPED--TLVH-PED-----RAELA--RT------RYL---- 58 (355)
T ss_pred CEEEECCCCCC--cchHHHHHHHHHHHhCCCeEEEEEecCccc--cccc-ccc-----ccccc--ch------HHH----
Confidence 69999988854 488999999999999996555544433221 0000 000 00000 00 000
Q ss_pred CcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccch---hhhccCceEEEEeeCCcchhhhhhcccccccccCCCc
Q 012436 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP---LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (464)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~---~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~ 192 (464)
......+.......+.+++.++|+||++........ .++..++|+++++|......
T Consensus 59 ----~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------- 117 (355)
T cd03799 59 ----ARSLALLAQALVLARELRRLGIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFR----------------- 117 (355)
T ss_pred ----HHHHHHHHHHHHHHHHHHhcCCCEEEECCCCchHHHHHHHHHhcCCCEEEEEecccccc-----------------
Confidence 011112233344555567789999998766433322 33356899999999433100
Q ss_pred ccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCC-CCCeEEecCCCCCCCCccCCCCCCCCCcE
Q 012436 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLERSTEYPA 271 (464)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~-~~~i~~i~~~~d~~~~~~~~~~~~~~~~~ 271 (464)
.... +.++..++.+|.++++|+..++.+.+.++. ..++.++|||+|.+.+.........+++.
T Consensus 118 --------~~~~--------~~~~~~~~~~~~vi~~s~~~~~~l~~~~~~~~~~~~vi~~~~d~~~~~~~~~~~~~~~~~ 181 (355)
T cd03799 118 --------SPDA--------IDLDEKLARADFVVAISEYNRQQLIRLLGCDPDKIHVVHCGVDLERFPPRPPPPPGEPLR 181 (355)
T ss_pred --------cCch--------HHHHHHHhhCCEEEECCHHHHHHHHHhcCCCcccEEEEeCCcCHHHcCCccccccCCCeE
Confidence 0000 244666789999999999999999997544 67899999999988776443223355688
Q ss_pred EEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHH
Q 012436 272 IISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVK 351 (464)
Q Consensus 272 i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~ 351 (464)
++|+|++.+.||++.++++++.+.+.. ++++++++|.++.. +++++.++++++.++|.+.|+++.+++.+
T Consensus 182 i~~~g~~~~~k~~~~l~~~~~~l~~~~----~~~~l~i~G~~~~~------~~~~~~~~~~~~~~~v~~~g~~~~~~l~~ 251 (355)
T cd03799 182 ILSVGRLVEKKGLDYLLEALALLKDRG----IDFRLDIVGDGPLR------DELEALIAELGLEDRVTLLGAKSQEEVRE 251 (355)
T ss_pred EEEEeeeccccCHHHHHHHHHHHhhcC----CCeEEEEEECCccH------HHHHHHHHHcCCCCeEEECCcCChHHHHH
Confidence 999999999999999999999988764 58999999998653 67888888888889999999999999999
Q ss_pred HHhcCcEEEEcCCC------CCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC--CHHHHHHHHHHHHcC
Q 012436 352 LLGGAVVGIHSMID------EHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ--NAEEYADAIVKIISM 423 (464)
Q Consensus 352 ~l~~ad~~v~ps~~------e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~--~~~~la~~i~~l~~~ 423 (464)
+|++||++++||.. |++|++++|||++|+|+|+++.++. .+++.+ +.+|++++ |+++++++|.++++
T Consensus 252 ~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~-~~~i~~---~~~g~~~~~~~~~~l~~~i~~~~~- 326 (355)
T cd03799 252 LLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGI-PELVED---GETGLLVPPGDPEALADAIERLLD- 326 (355)
T ss_pred HHHhCCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCCc-chhhhC---CCceEEeCCCCHHHHHHHHHHHHh-
Confidence 99999999999988 9999999999999999999999888 788888 77998885 89999999999999
Q ss_pred CHHHHHHHHHHHHHHH-HccCHHHHHHH
Q 012436 424 PETERLEMAAAARRRA-ARFSEQRFYED 450 (464)
Q Consensus 424 ~~~~~~~~~~~~~~~~-~~~s~~~~~~~ 450 (464)
+++.+.++++++++.+ ++|||+..+++
T Consensus 327 ~~~~~~~~~~~a~~~~~~~~s~~~~~~~ 354 (355)
T cd03799 327 DPELRREMGEAGRARVEEEFDIRKQAAR 354 (355)
T ss_pred CHHHHHHHHHHHHHHHHHhcCHHHHhhc
Confidence 9999999999999999 89999998875
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-37 Score=294.63 Aligned_cols=353 Identities=20% Similarity=0.155 Sum_probs=259.3
Q ss_pred eEEEecCCCCC--CCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeeccccccc
Q 012436 36 SVAFFHPNTND--GGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEE 113 (464)
Q Consensus 36 kI~~~~~~~~~--~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (464)
||+++..++.+ .||+++++.+++++|.+.|+++.+++............ .. .. .. .....
T Consensus 1 ~ili~~~~~~~~~~gG~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~~~~~----~~--~~------~~----~~~~~-- 62 (365)
T cd03809 1 RILIDARFLASRRPTGIGRYARELLRALLKLDPEEVLLLLPGAPGLLLLPL----RA--AL------RL----LLRLP-- 62 (365)
T ss_pred CEEEechhhhcCCCCcHHHHHHHHHHHHHhcCCceEEEEecCccccccccc----hh--cc------cc----ccccc--
Confidence 68888877776 58999999999999999996666555543321110000 00 00 00 00000
Q ss_pred ccCcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccchhhhccCceEEEEeeCCcchhhhhhcccccccccCCCcc
Q 012436 114 STYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNAS 193 (464)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~ 193 (464)
........+...+.....+...++|++|++....... +..++|+++++|.... ...
T Consensus 63 ----~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~---~~~~~~~i~~~hd~~~------~~~----------- 118 (365)
T cd03809 63 ----RRLLWGLLFLLRAGDRLLLLLLGLDLLHSPHNTAPLL---RLRGVPVVVTIHDLIP------LRF----------- 118 (365)
T ss_pred ----cccccchhhHHHHHHHHHhhhcCCCeeeecccccCcc---cCCCCCEEEEeccchh------hhC-----------
Confidence 0000011122233444445668999999777655443 6789999999993220 000
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCC-CCCeEEecCCCCCCCCccCCC------CCC
Q 012436 194 IAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPL------ERS 266 (464)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~-~~~i~~i~~~~d~~~~~~~~~------~~~ 266 (464)
...........+...++..++.+|.++++|+..++.+.+.++. ..++.++|||+|...+..... ...
T Consensus 119 ------~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~ 192 (365)
T cd03809 119 ------PEYFSPGFRRYFRRLLRRALRRADAIITVSEATKRDLLRYLGVPPDKIVVIPLGVDPRFRPPPAEAEVLRALYL 192 (365)
T ss_pred ------cccCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHHHHHHHhCcCHHHEEeeccccCccccCCCchHHHHHHhcC
Confidence 0000011234445567888899999999999999999998874 578899999999887664321 233
Q ss_pred CCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCh
Q 012436 267 TEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLY 346 (464)
Q Consensus 267 ~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~ 346 (464)
.+.++++|+|++.+.||++.+++++..+.+.. ++++++++|.+.... ....+..+++++.++|+++|++++
T Consensus 193 ~~~~~i~~~G~~~~~K~~~~~l~~~~~~~~~~----~~~~l~i~G~~~~~~-----~~~~~~~~~~~~~~~v~~~g~~~~ 263 (365)
T cd03809 193 LPRPYFLYVGTIEPRKNLERLLEAFARLPAKG----PDPKLVIVGKRGWLN-----EELLARLRELGLGDRVRFLGYVSD 263 (365)
T ss_pred CCCCeEEEeCCCccccCHHHHHHHHHHHHHhc----CCCCEEEecCCcccc-----HHHHHHHHHcCCCCeEEECCCCCh
Confidence 56689999999999999999999999998876 479999999876432 223333356777889999999999
Q ss_pred hHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC--CHHHHHHHHHHHHcCC
Q 012436 347 RDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ--NAEEYADAIVKIISMP 424 (464)
Q Consensus 347 ~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~--~~~~la~~i~~l~~~~ 424 (464)
+++.++|+.||++++||..|++|++++|||++|+|||+++.++. .+++.+ +|++++ |+++++++|.++++ |
T Consensus 264 ~~~~~~~~~~d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~-~e~~~~-----~~~~~~~~~~~~~~~~i~~l~~-~ 336 (365)
T cd03809 264 EELAALYRGARAFVFPSLYEGFGLPVLEAMACGTPVIASNISSL-PEVAGD-----AALYFDPLDPEALAAAIERLLE-D 336 (365)
T ss_pred hHHHHHHhhhhhhcccchhccCCCCHHHHhcCCCcEEecCCCCc-cceecC-----ceeeeCCCCHHHHHHHHHHHhc-C
Confidence 99999999999999999999999999999999999999999887 677644 455443 89999999999999 9
Q ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHH
Q 012436 425 ETERLEMAAAARRRAARFSEQRFYEDFK 452 (464)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 452 (464)
++.+.++++++++.+++|+|+.+++++.
T Consensus 337 ~~~~~~~~~~~~~~~~~~sw~~~~~~~~ 364 (365)
T cd03809 337 PALREELRERGLARAKRFSWEKTARRTL 364 (365)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 9999999999997779999999999875
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-36 Score=291.86 Aligned_cols=352 Identities=14% Similarity=0.113 Sum_probs=243.7
Q ss_pred eEEEecCC--CCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeeccccccc
Q 012436 36 SVAFFHPN--TNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEE 113 (464)
Q Consensus 36 kI~~~~~~--~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (464)
||+++... .+..||+++++.+++++|.+.||+++|++..... ... . ....+++++.++....
T Consensus 1 ~i~~i~~~~~~~~~gG~~~~~~~la~~L~~~g~~v~v~~~~~~~--~~~-----~------~~~~~i~~~~~~~~~~--- 64 (363)
T cd04955 1 KIAIIGTRGIPAKYGGFETFVEELAPRLVARGHEVTVYCRSPYP--KQK-----E------TEYNGVRLIHIPAPEI--- 64 (363)
T ss_pred CeEEEecCcCCcccCcHHHHHHHHHHHHHhcCCCEEEEEccCCC--CCc-----c------cccCCceEEEcCCCCc---
Confidence 68888553 3455999999999999999999655544433221 110 0 0011223333322110
Q ss_pred ccCcceehhhhchhhhHHHHHHh-hhcCCcEEEecccccc-cchhhhccCceEEEEeeCCcchhhhhhcccccccccCCC
Q 012436 114 STYPRFTMIGQSFGSVYLSWEAL-CKFTPLYYFDTSGYAF-TYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNN 191 (464)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~l-~~~~~Dvv~~~~~~~~-~~~~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~ 191 (464)
...... ........+.+ ++.++|++|....... ...+++..+.|++++.|.... ..
T Consensus 65 ---~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~---------------~~- 122 (363)
T cd04955 65 ---GGLGTI---IYDILAILHALFVKRDIDHVHALGPAIAPFLPLLRLKGKKVVVNMDGLEW---------------KR- 122 (363)
T ss_pred ---cchhhh---HHHHHHHHHHHhccCCeEEEEecCccHHHHHHHHHhcCCCEEEEccCcce---------------ee-
Confidence 000000 11111122222 3456777775443321 112445568999999994221 00
Q ss_pred cccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCcc-CC---CCCCC
Q 012436 192 ASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQV-LP---LERST 267 (464)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~-~~---~~~~~ 267 (464)
..+ .....+.+.+.++..++.+|.++++|+..++.+.+.++... .+||||+|...+.. .. .....
T Consensus 123 -----~~~----~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~--~~i~ngv~~~~~~~~~~~~~~~~~~ 191 (363)
T cd04955 123 -----AKW----GRPAKRYLKFGEKLAVKFADRLIADSPGIKEYLKEKYGRDS--TYIPYGADHVVSSEEDEILKKYGLE 191 (363)
T ss_pred -----ccc----ccchhHHHHHHHHHHHhhccEEEeCCHHHHHHHHHhcCCCC--eeeCCCcChhhcchhhhhHHhcCCC
Confidence 000 01122344556677889999999999999999987776433 88999999876542 00 01112
Q ss_pred CCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHH-hcCCCCcEEEccCCCh
Q 012436 268 EYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSI-ELKVDGNVEFYKNLLY 346 (464)
Q Consensus 268 ~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~-~~~l~~~v~~~g~~~~ 346 (464)
+...++|+|++.+.||++.+++|++++.. +++|+++|+++.. ..+.+.++ .+++.++|+++|++++
T Consensus 192 ~~~~i~~~G~~~~~Kg~~~li~a~~~l~~-------~~~l~ivG~~~~~------~~~~~~~~~~~~~~~~V~~~g~~~~ 258 (363)
T cd04955 192 PGRYYLLVGRIVPENNIDDLIEAFSKSNS-------GKKLVIVGNADHN------TPYGKLLKEKAAADPRIIFVGPIYD 258 (363)
T ss_pred CCcEEEEEecccccCCHHHHHHHHHhhcc-------CceEEEEcCCCCc------chHHHHHHHHhCCCCcEEEccccCh
Confidence 34578999999999999999999988742 6899999998643 22333333 5667789999999999
Q ss_pred hHHHHHHhcCcEEEEcCCC-CCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecCCHHHHHHHHHHHHcCCH
Q 012436 347 RDLVKLLGGAVVGIHSMID-EHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQNAEEYADAIVKIISMPE 425 (464)
Q Consensus 347 ~~~~~~l~~ad~~v~ps~~-e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~~~~~la~~i~~l~~~~~ 425 (464)
+++.++|++||++++||.. |++|++++|||+||+|||+|+.++. .|++.+ +|+++++.+.++++|.++++ |+
T Consensus 259 ~~~~~~~~~ad~~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~~-~e~~~~-----~g~~~~~~~~l~~~i~~l~~-~~ 331 (363)
T cd04955 259 QELLELLRYAALFYLHGHSVGGTNPSLLEAMAYGCPVLASDNPFN-REVLGD-----KAIYFKVGDDLASLLEELEA-DP 331 (363)
T ss_pred HHHHHHHHhCCEEEeCCccCCCCChHHHHHHHcCCCEEEecCCcc-ceeecC-----CeeEecCchHHHHHHHHHHh-CH
Confidence 9999999999999999987 9999999999999999999999987 677643 67666633449999999999 99
Q ss_pred HHHHHHHHHHHHHH-HccCHHHHHHHHHHHHH
Q 012436 426 TERLEMAAAARRRA-ARFSEQRFYEDFKAAIR 456 (464)
Q Consensus 426 ~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~ 456 (464)
+.+.++++++++.+ ++|||+.+++++.++|+
T Consensus 332 ~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~ 363 (363)
T cd04955 332 EEVSAMAKAARERIREKYTWEKIADQYEELYK 363 (363)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 99999999999998 78999999999999874
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=292.77 Aligned_cols=350 Identities=20% Similarity=0.183 Sum_probs=246.3
Q ss_pred eEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHH---HHHhhc-CcccCCCceeeeeeccccc
Q 012436 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLA---RAVDRF-GVELLHPPKVVHLYRRKWI 111 (464)
Q Consensus 36 kI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~ 111 (464)
||+++.+.+ .+||+++++.+++++|.+.||++++++.... +...+ ...... +. .. .++..
T Consensus 1 ki~~~~~~~-~~GGv~~~~~~l~~~l~~~g~~v~~~~~~~~-----~~~~~~~~~~~~~~~g~------~~-~~~~~--- 64 (372)
T cd03792 1 KVLHVNSTP-YGGGVAEILHSLVPLMRDLGVDTRWEVIKGD-----PEFFNVTKKFHNALQGA------DI-ELSEE--- 64 (372)
T ss_pred CeEEEeCCC-CCCcHHHHHHHHHHHHHHcCCCceEEecCCC-----hhHHHHHHHhhHhhcCC------CC-CCCHH---
Confidence 688887776 4469999999999999999977776654332 11111 111000 11 10 01100
Q ss_pred ccccCcceehhhhchhhhH-HHHHHhhhcCCcEEEecccccccchhhh-ccCceEEEEeeCCcchhhhhhcccccccccC
Q 012436 112 EESTYPRFTMIGQSFGSVY-LSWEALCKFTPLYYFDTSGYAFTYPLAR-IFGCRVICYTHYPTISLDMISRVREGSSMYN 189 (464)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~Dvv~~~~~~~~~~~~~~-~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~ 189 (464)
.+ ........ ...+.+...+||+||.+......++.++ ..++|+|+++|.+..
T Consensus 65 ------~~---~~~~~~~~~~~~~~~~~~~~Dvv~~h~~~~~~~~~~~~~~~~~~i~~~H~~~~---------------- 119 (372)
T cd03792 65 ------EK---EIYLEWNEENAERPLLDLDADVVVIHDPQPLALPLFKKKRGRPWIWRCHIDLS---------------- 119 (372)
T ss_pred ------HH---HHHHHHHHHHhccccccCCCCEEEECCCCchhHHHhhhcCCCeEEEEeeeecC----------------
Confidence 00 00000000 1111244668999998877654444333 348999999994320
Q ss_pred CCcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCC-------
Q 012436 190 NNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLP------- 262 (464)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~------- 262 (464)
... ...++ ..+..++.+|.+++.|+. .... +...+..++|||+|........
T Consensus 120 --------~~~----~~~~~----~~~~~~~~~d~~i~~~~~---~~~~--~~~~~~~vipngvd~~~~~~~~~~~~~~~ 178 (372)
T cd03792 120 --------SPN----RRVWD----FLQPYIEDYDAAVFHLPE---YVPP--QVPPRKVIIPPSIDPLSGKNRELSPADIE 178 (372)
T ss_pred --------CCc----HHHHH----HHHHHHHhCCEEeecHHH---hcCC--CCCCceEEeCCCCCCCccccCCCCHHHHH
Confidence 000 00111 124455789999988832 2222 2233334999999965311000
Q ss_pred -----CCCCCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCc
Q 012436 263 -----LERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGN 337 (464)
Q Consensus 263 -----~~~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~ 337 (464)
....++.++++++||+.+.||++.+++|++.+.+.. |+++|+++|+|+..+. ...+.++++.+..++.++
T Consensus 179 ~~~~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~----~~~~l~i~G~g~~~~~-~~~~~~~~~~~~~~~~~~ 253 (372)
T cd03792 179 YILEKYGIDPERPYITQVSRFDPWKDPFGVIDAYRKVKERV----PDPQLVLVGSGATDDP-EGWIVYEEVLEYAEGDPD 253 (372)
T ss_pred HHHHHhCCCCCCcEEEEEeccccccCcHHHHHHHHHHHhhC----CCCEEEEEeCCCCCCc-hhHHHHHHHHHHhCCCCC
Confidence 111246689999999999999999999999987764 5899999999865321 222334555556677788
Q ss_pred EEEccCC--ChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecCCHHHHHH
Q 012436 338 VEFYKNL--LYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQNAEEYAD 415 (464)
Q Consensus 338 v~~~g~~--~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~~~~~la~ 415 (464)
|.+.|.. +++++..+|+.||++++||..|+||++++|||+||+|||+|+.++. .+++.+ +.+|+++++.+++++
T Consensus 254 v~~~~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~-~~~i~~---~~~g~~~~~~~~~a~ 329 (372)
T cd03792 254 IHVLTLPPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWKGKPVIAGPVGGI-PLQIED---GETGFLVDTVEEAAV 329 (372)
T ss_pred eEEEecCCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCCc-hhhccc---CCceEEeCCcHHHHH
Confidence 9999887 8899999999999999999999999999999999999999999988 678888 899999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHHH-HccCHHHHHHHHHHHHHH
Q 012436 416 AIVKIISMPETERLEMAAAARRRA-ARFSEQRFYEDFKAAIRP 457 (464)
Q Consensus 416 ~i~~l~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~ 457 (464)
+|.++++ |++.++++++++++.+ ++|+|+.+++++.++|++
T Consensus 330 ~i~~ll~-~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 330 RILYLLR-DPELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred HHHHHHc-CHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 9999999 9999999999999998 899999999999999986
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-37 Score=307.22 Aligned_cols=391 Identities=17% Similarity=0.160 Sum_probs=258.0
Q ss_pred ceEEEecCCC----------CCCCCcchhhHHHH--------HHhhhhCCCCc--eEEEcccCCCC-chhHHHHHHhhcC
Q 012436 35 TSVAFFHPNT----------NDGGGGERVLWCAV--------KAIQEESPDLD--CIVYTGDHDAF-PDSLLARAVDRFG 93 (464)
Q Consensus 35 mkI~~~~~~~----------~~~GG~~~~~~~l~--------~~L~~~g~~~~--v~~~~~~~~~~-~~~~~~~~~~~~~ 93 (464)
+||+++++.. +..||...++.+++ +.|++.|++++ |.++|...... ...+.+... .
T Consensus 280 ~~i~~iS~Hg~~~~~~~lG~~DtGGQ~vYVl~~aral~~el~~~l~~~G~~v~~~v~i~TR~i~~~~~~~~~~~~e---~ 356 (815)
T PLN00142 280 FNVVIFSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKQQGLDIKPQILIVTRLIPDAKGTTCNQRLE---K 356 (815)
T ss_pred HhhheecccccccccccCCCCCCCCceehHHHHHHHHHHHHHHHHHhcCCCccceeEEEEeccCCccCCcccCcce---e
Confidence 5677765433 22288888887655 67778897663 67888743111 111111111 1
Q ss_pred cccCCCceeeeeeccccc--ccccCcceehhhhch-hhhHHHHHHh-h--hcCCcEEEecccccccch--hhhccCceEE
Q 012436 94 VELLHPPKVVHLYRRKWI--EESTYPRFTMIGQSF-GSVYLSWEAL-C--KFTPLYYFDTSGYAFTYP--LARIFGCRVI 165 (464)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~l-~--~~~~Dvv~~~~~~~~~~~--~~~~~~~p~v 165 (464)
+...++..+.+++.+.-. .....+++.. +.++ .+...+.+.+ . ..+||+||++...++... +++..|+|.+
T Consensus 357 v~~~~~~~I~rvP~g~~~~~l~~~i~ke~l-~p~L~~f~~~~~~~~~~~~~~~PDlIHaHYwdsg~vA~~La~~lgVP~v 435 (815)
T PLN00142 357 VSGTEHSHILRVPFRTEKGILRKWISRFDV-WPYLETFAEDAASEILAELQGKPDLIIGNYSDGNLVASLLAHKLGVTQC 435 (815)
T ss_pred ccCCCceEEEecCCCCCccccccccCHHHH-HHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHhCCCEE
Confidence 111223356565554310 0001111111 1111 1112222222 2 236999998877665544 6779999999
Q ss_pred EEeeCCcchhhhhhcccccccccCCCcccccchhhhHHHHHHHHHH-HHHHHHHhhcCCEEEEcCHHHHHHH-------H
Q 012436 166 CYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFF-SWMYGLVGSCADLAMVNSSWTQSHI-------E 237 (464)
Q Consensus 166 ~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ad~vi~~S~~~~~~~-------~ 237 (464)
.+.|.-.. ..+.. ...+ | ......+.... ...+..++..||.||+.|......+ .
T Consensus 436 ~T~HsL~k----~K~~~--~~~~----------~-~~~e~~y~~~~r~~aE~~a~~~Ad~IIasT~qEi~g~~~~i~qy~ 498 (815)
T PLN00142 436 TIAHALEK----TKYPD--SDIY----------W-KKFDDKYHFSCQFTADLIAMNHADFIITSTYQEIAGSKDTVGQYE 498 (815)
T ss_pred EEcccchh----hhccc--cCCc----------c-cccchhhhhhhchHHHHHHHHhhhHHHhCcHHHHhcccchhhhhh
Confidence 99993210 00000 0000 0 00000111110 1235677899999999997776422 1
Q ss_pred HHh------------CC---CCCeEEecCCCCCCCCccCCCC----------------------------CCCCCcEEEE
Q 012436 238 KLW------------GI---PDRIKRVYPPCDTSGLQVLPLE----------------------------RSTEYPAIIS 274 (464)
Q Consensus 238 ~~~------------~~---~~~i~~i~~~~d~~~~~~~~~~----------------------------~~~~~~~i~~ 274 (464)
.+. +. ..++.++++|+|...|.+.... ...++++|++
T Consensus 499 sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~ 578 (815)
T PLN00142 499 SHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFS 578 (815)
T ss_pred cccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHhhHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEE
Confidence 110 11 4588999999998876532210 1234568999
Q ss_pred EeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCC------ccHHHHHHHHHHHHhcCCCCcEEEccCC----
Q 012436 275 VAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNK------SDEERLQSLKDKSIELKVDGNVEFYKNL---- 344 (464)
Q Consensus 275 ~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~------~~~~~~~~l~~~~~~~~l~~~v~~~g~~---- 344 (464)
+||+.+.||++.+++|+.++.+.. ++++|+|+|++.+. +..+..+++.++++++++.++|.|+|..
T Consensus 579 VGRL~~~KGid~LIeA~a~l~~l~----~~~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~lgL~~~V~flG~~~~~~ 654 (815)
T PLN00142 579 MARLDRVKNLTGLVEWYGKNKRLR----ELVNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLKGQFRWIAAQTNRV 654 (815)
T ss_pred EecCcccCCHHHHHHHHHHHHHhC----CCcEEEEEECCccccccccHHHHHHHHHHHHHHHHcCCCCcEEEcCCcCCcc
Confidence 999999999999999999886654 47999999987321 1122346688899999999999999854
Q ss_pred ChhHHHHHHh-cCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC--CHHHHHHHHHHH-
Q 012436 345 LYRDLVKLLG-GAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ--NAEEYADAIVKI- 420 (464)
Q Consensus 345 ~~~~~~~~l~-~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~--~~~~la~~i~~l- 420 (464)
+.+++..+++ .+|++++||.+|+||++++|||+||+|||+|+.||. .|++.+ +.+|++++ |+++++++|.++
T Consensus 655 ~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG~-~EIV~d---G~tG~LV~P~D~eaLA~aI~~lL 730 (815)
T PLN00142 655 RNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGP-AEIIVD---GVSGFHIDPYHGDEAANKIADFF 730 (815)
T ss_pred cHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCCH-HHHhcC---CCcEEEeCCCCHHHHHHHHHHHH
Confidence 3467877777 479999999999999999999999999999999998 799999 99999986 999999998765
Q ss_pred ---HcCCHHHHHHHHHHHHHHH-HccCHHHHHHHHHHHH
Q 012436 421 ---ISMPETERLEMAAAARRRA-ARFSEQRFYEDFKAAI 455 (464)
Q Consensus 421 ---~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~ 455 (464)
++ |++.+++++++|++.+ ++|||+.++++++++.
T Consensus 731 ekLl~-Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 731 EKCKE-DPSYWNKISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred HHhcC-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 46 9999999999999999 8999999999998865
|
|
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=291.57 Aligned_cols=343 Identities=17% Similarity=0.130 Sum_probs=251.5
Q ss_pred eEEEecCCCCC-CCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeecccccccc
Q 012436 36 SVAFFHPNTND-GGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (464)
Q Consensus 36 kI~~~~~~~~~-~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (464)
||+++.+++++ .||+++++.+++++|.+.|+++++++..... .... .. ..+. .+........ ..
T Consensus 1 kil~i~~~~~p~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~--~~~~---~~--~~~~------~~~~~~~~~~--~~ 65 (357)
T cd03795 1 RVLHVGKFYPPDRGGIEQVIRDLAEGLAARGIEVAVLCASPEP--KGRD---EE--RNGH------RVIRAPSLLN--VA 65 (357)
T ss_pred CeeEecCCCCCCCCcHHHHHHHHHHHHHhCCCceEEEecCCCC--cchh---hh--ccCc------eEEEeecccc--cc
Confidence 68888877766 5899999999999999999666655544321 1110 00 0011 2222211100 00
Q ss_pred cCcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccch--hhhccCceEEEEeeCCcchhhhhhcccccccccCCCc
Q 012436 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (464)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~--~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~ 192 (464)
..+. ........+ ++..+||+||.+........ .....++|.++++|....
T Consensus 66 ~~~~-------~~~~~~~~~-~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~------------------- 118 (357)
T cd03795 66 STPF-------SPSFFKQLK-KLAKKADVIHLHFPNPLADLALLLLPRKKPVVVHWHSDIV------------------- 118 (357)
T ss_pred cccc-------cHHHHHHHH-hcCCCCCEEEEecCcchHHHHHHHhccCceEEEEEcChhh-------------------
Confidence 0000 011111111 55779999997665543322 222358899999983221
Q ss_pred ccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCCC------CCC
Q 012436 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL------ERS 266 (464)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~~------~~~ 266 (464)
.. ....+.+..+++..++.+|.++++|+...+.+...+....++.++|||+|.+.+..... ...
T Consensus 119 -------~~---~~~~~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~~~~~~~~~~~i~~gi~~~~~~~~~~~~~~~~~~~ 188 (357)
T cd03795 119 -------KQ---KLLLKLYRPLQRRFLRRADAIVATSPNYAETSPVLRRFRDKVRVIPLGLDPARYPRPDALEEAIWRRA 188 (357)
T ss_pred -------cc---chhhhhhhHHHHHHHHhcCEEEeCcHHHHHHHHHhcCCccceEEecCCCChhhcCCcchhhhHhhcCC
Confidence 00 01223344556778899999999999999988776655678999999999887654322 123
Q ss_pred CCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCh
Q 012436 267 TEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLY 346 (464)
Q Consensus 267 ~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~ 346 (464)
.+.+.++|+|++.+.||++.++++++++. +++++++|+|+.. +.+++.+++++..++|.|+|++++
T Consensus 189 ~~~~~i~~~G~~~~~K~~~~li~a~~~l~--------~~~l~i~G~g~~~------~~~~~~~~~~~~~~~V~~~g~v~~ 254 (357)
T cd03795 189 AGRPFFLFVGRLVYYKGLDVLLEAAAALP--------DAPLVIVGEGPLE------AELEALAAALGLLDRVRFLGRLDD 254 (357)
T ss_pred CCCcEEEEecccccccCHHHHHHHHHhcc--------CcEEEEEeCChhH------HHHHHHHHhcCCcceEEEcCCCCH
Confidence 46689999999999999999999999873 5899999998643 677888888888899999999999
Q ss_pred hHHHHHHhcCcEEEEcCC--CCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC--CHHHHHHHHHHHHc
Q 012436 347 RDLVKLLGGAVVGIHSMI--DEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ--NAEEYADAIVKIIS 422 (464)
Q Consensus 347 ~~~~~~l~~ad~~v~ps~--~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~--~~~~la~~i~~l~~ 422 (464)
+++.++|+.||++++||. .|++|++++|||++|+|||+++.++..+.+..+ +.+|++++ |+++++++|.++++
T Consensus 255 ~~~~~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~---~~~g~~~~~~d~~~~~~~i~~l~~ 331 (357)
T cd03795 255 EEKAALLAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNLH---GVTGLVVPPGDPAALAEAIRRLLE 331 (357)
T ss_pred HHHHHHHHhCCEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchhHHhhC---CCceEEeCCCCHHHHHHHHHHHHH
Confidence 999999999999999985 699999999999999999999999884333334 58898875 89999999999999
Q ss_pred CCHHHHHHHHHHHHHHH-HccCHHHHH
Q 012436 423 MPETERLEMAAAARRRA-ARFSEQRFY 448 (464)
Q Consensus 423 ~~~~~~~~~~~~~~~~~-~~~s~~~~~ 448 (464)
|++.++++++++++.+ ++|||+.++
T Consensus 332 -~~~~~~~~~~~~~~~~~~~~s~~~~~ 357 (357)
T cd03795 332 -DPELRERLGEAARERAEEEFTADRMV 357 (357)
T ss_pred -CHHHHHHHHHHHHHHHHHhcchHhhC
Confidence 9999999999999999 899999763
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-36 Score=290.76 Aligned_cols=348 Identities=17% Similarity=0.124 Sum_probs=251.0
Q ss_pred eEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeeccccccccc
Q 012436 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (464)
Q Consensus 36 kI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (464)
||+|++++.+..||.++++.+++++|.+.||++.+........ ..... ... . ......
T Consensus 1 kI~~v~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~--~~~~~-------~~~---~-~~~~~~--------- 58 (366)
T cd03822 1 RIALVSPYPPRKCGIATFTTDLVNALSARGPDVLVVSVAALYP--SLLYG-------GEQ---E-VVRVIV--------- 58 (366)
T ss_pred CeEEecCCCCCCCcHHHHHHHHHHHhhhcCCeEEEEEeecccC--cccCC-------Ccc---c-ceeeee---------
Confidence 7999999887678999999999999999996666555443221 00000 000 0 000000
Q ss_pred CcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccch----h----hhccCceEEEEeeCCcchhhhhhcccccccc
Q 012436 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP----L----ARIFGCRVICYTHYPTISLDMISRVREGSSM 187 (464)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~----~----~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~ 187 (464)
...........+.+++.+||+||.+...+...+ . .+..++|+|+++|....
T Consensus 59 -------~~~~~~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~-------------- 117 (366)
T cd03822 59 -------LDNPLDYRRAARAIRLSGPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLL-------------- 117 (366)
T ss_pred -------cCCchhHHHHHHHHhhcCCCEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCc--------------
Confidence 000112334556678889999996553222111 1 12389999999994310
Q ss_pred cCCCcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcC-HHHHHHHHHHhCCCCCeEEecCCCCCCCCccCCC---
Q 012436 188 YNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNS-SWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL--- 263 (464)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S-~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~~--- 263 (464)
... .....+..+..++.+|.++++| +..++.+...+ ..++.++|||++...+.....
T Consensus 118 ----------~~~-------~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~ 178 (366)
T cd03822 118 ----------HEP-------RPGDRALLRLLLRRADAVIVMSSELLRALLLRAY--PEKIAVIPHGVPDPPAEPPESLKA 178 (366)
T ss_pred ----------ccc-------chhhhHHHHHHHhcCCEEEEeeHHHHHHHHhhcC--CCcEEEeCCCCcCcccCCchhhHh
Confidence 000 0011234466679999999996 33344433321 479999999998776653211
Q ss_pred -CCCCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEcc
Q 012436 264 -ERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYK 342 (464)
Q Consensus 264 -~~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g 342 (464)
....+.++++|+|++.+.||++.+++|++.+.++. |+++|+++|++....... .....++++++++.++|.++|
T Consensus 179 ~~~~~~~~~i~~~G~~~~~K~~~~ll~a~~~~~~~~----~~~~l~i~G~~~~~~~~~-~~~~~~~i~~~~~~~~v~~~~ 253 (366)
T cd03822 179 LGGLDGRPVLLTFGLLRPYKGLELLLEALPLLVAKH----PDVRLLVAGETHPDLERY-RGEAYALAERLGLADRVIFIN 253 (366)
T ss_pred hcCCCCCeEEEEEeeccCCCCHHHHHHHHHHHHhhC----CCeEEEEeccCccchhhh-hhhhHhHHHhcCCCCcEEEec
Confidence 12345689999999999999999999999998875 689999999876432111 111113477888899999998
Q ss_pred C-CChhHHHHHHhcCcEEEEcCCCC--CCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC--CHHHHHHHH
Q 012436 343 N-LLYRDLVKLLGGAVVGIHSMIDE--HFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ--NAEEYADAI 417 (464)
Q Consensus 343 ~-~~~~~~~~~l~~ad~~v~ps~~e--~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~--~~~~la~~i 417 (464)
. ++.+++.++|+.||++++||..| ++|++++|||++|+|||+++.++ .+++ .+ +.+|++++ |+++++++|
T Consensus 254 ~~~~~~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i-~~---~~~g~~~~~~d~~~~~~~l 328 (366)
T cd03822 254 RYLPDEELPELFSAADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-AEEV-LD---GGTGLLVPPGDPAALAEAI 328 (366)
T ss_pred CcCCHHHHHHHHhhcCEEEecccccccccchHHHHHHHcCCCEEecCCCC-hhee-ee---CCCcEEEcCCCHHHHHHHH
Confidence 7 89999999999999999999999 99999999999999999999988 3454 45 57888875 899999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q 012436 418 VKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIR 456 (464)
Q Consensus 418 ~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 456 (464)
.++++ |++.+.++++++++.+++|||+.+++++.++|+
T Consensus 329 ~~l~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 366 (366)
T cd03822 329 RRLLA-DPELAQALRARAREYARAMSWERVAERYLRLLA 366 (366)
T ss_pred HHHHc-ChHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhC
Confidence 99999 999999999999999966999999999998873
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-36 Score=287.67 Aligned_cols=344 Identities=20% Similarity=0.225 Sum_probs=253.5
Q ss_pred eEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeeccccccccc
Q 012436 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (464)
Q Consensus 36 kI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (464)
||+++.+.....||.++++..++++|.+.|+++.++...... .. ......++.+..+......
T Consensus 1 kI~i~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~----~~---------~~~~~~~~~~~~~~~~~~~---- 63 (348)
T cd03820 1 KILFVIPSLGNAGGAERVLSNLANALAEKGHEVTIISLDKGE----PP---------FYELDPKIKVIDLGDKRDS---- 63 (348)
T ss_pred CeEEEeccccCCCChHHHHHHHHHHHHhCCCeEEEEecCCCC----CC---------ccccCCccceeeccccccc----
Confidence 689998888767799999999999999999555544433221 00 0111111222222211100
Q ss_pred CcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccchhhhccC-ceEEEEeeCCcchhhhhhcccccccccCCCccc
Q 012436 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFG-CRVICYTHYPTISLDMISRVREGSSMYNNNASI 194 (464)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~-~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~ 194 (464)
.....+.......+.+++.+||+|+.+......+......+ +|++.+.|....
T Consensus 64 -----~~~~~~~~~~~~~~~l~~~~~d~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--------------------- 117 (348)
T cd03820 64 -----KLLARFKKLRRLRKLLKNNKPDVVISFLTSLLTFLASLGLKIVKLIVSEHNSPD--------------------- 117 (348)
T ss_pred -----chhccccchHHHHHhhcccCCCEEEEcCchHHHHHHHHhhccccEEEecCCCcc---------------------
Confidence 01111233455666788899999997776522211222344 499998884321
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCCCCCCCCCcEEEE
Q 012436 195 AQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIIS 274 (464)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~~~~~~~~~~i~~ 274 (464)
...... .....++..++.+|.+++.|+..+..... ....++.++|||++...+... ...+.+.+++
T Consensus 118 ---~~~~~~------~~~~~~~~~~~~~d~ii~~s~~~~~~~~~--~~~~~~~vi~~~~~~~~~~~~---~~~~~~~i~~ 183 (348)
T cd03820 118 ---AYKKRL------RRLLLRRLLYRRADAVVVLTEEDRALYYK--KFNKNVVVIPNPLPFPPEEPS---SDLKSKRILA 183 (348)
T ss_pred ---chhhhh------HHHHHHHHHHhcCCEEEEeCHHHHHHhhc--cCCCCeEEecCCcChhhcccc---CCCCCcEEEE
Confidence 000000 00114577789999999999999832222 237889999999998766532 2355689999
Q ss_pred EeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHHHh
Q 012436 275 VAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLG 354 (464)
Q Consensus 275 ~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~ 354 (464)
+|++.+.||++.++++++.+.+.. |+++|+++|.++.. +.+++.++++++.++|.+.|.. +++.++|+
T Consensus 184 ~g~~~~~K~~~~l~~~~~~l~~~~----~~~~l~i~G~~~~~------~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~ 251 (348)
T cd03820 184 VGRLVPQKGFDLLIEAWAKIAKKH----PDWKLRIVGDGPER------EALEALIKELGLEDRVILLGFT--KNIEEYYA 251 (348)
T ss_pred EEeeccccCHHHHHHHHHHHHhcC----CCeEEEEEeCCCCH------HHHHHHHHHcCCCCeEEEcCCc--chHHHHHH
Confidence 999999999999999999998754 69999999988653 5677778888988999999994 89999999
Q ss_pred cCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC--CHHHHHHHHHHHHcCCHHHHHHHH
Q 012436 355 GAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ--NAEEYADAIVKIISMPETERLEMA 432 (464)
Q Consensus 355 ~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~--~~~~la~~i~~l~~~~~~~~~~~~ 432 (464)
+||++++||..|++|++++|||++|+|||+++.++..++++.+ +.+|++++ |+++++++|.++++ |++.+++++
T Consensus 252 ~ad~~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~---~~~g~~~~~~~~~~~~~~i~~ll~-~~~~~~~~~ 327 (348)
T cd03820 252 KASIFVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPSEIIED---GVNGLLVPNGDVEALAEALLRLME-DEELRKRMG 327 (348)
T ss_pred hCCEEEeCccccccCHHHHHHHHcCCCEEEecCCCchHhhhcc---CcceEEeCCCCHHHHHHHHHHHHc-CHHHHHHHH
Confidence 9999999999999999999999999999999976654777777 66998886 88999999999999 999999999
Q ss_pred HHHHHHHHccCHHHHHHHHH
Q 012436 433 AAARRRAARFSEQRFYEDFK 452 (464)
Q Consensus 433 ~~~~~~~~~~s~~~~~~~~~ 452 (464)
+++++.+++|+|++++++|.
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~ 347 (348)
T cd03820 328 ANARESAERFSIENIIKQWE 347 (348)
T ss_pred HHHHHHHHHhCHHHHHHHhc
Confidence 99977779999999999875
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-36 Score=287.85 Aligned_cols=327 Identities=21% Similarity=0.208 Sum_probs=239.8
Q ss_pred ceEEEecCCCC-----CCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeeccc
Q 012436 35 TSVAFFHPNTN-----DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRK 109 (464)
Q Consensus 35 mkI~~~~~~~~-----~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (464)
|||+++.+++. ..||+++++.+++++|.+.|| +|.+++...+...... .. .....
T Consensus 1 MkI~~i~~~~~~~~~~~~GG~~~~~~~l~~~L~~~g~--~V~v~~~~~~~~~~~~---------~~---------~~~~~ 60 (335)
T cd03802 1 MRIALVAPPREPVPPPAYGGTERVVAALTEGLVARGH--EVTLFASGDSKTAAPL---------VP---------VVPEP 60 (335)
T ss_pred CeEEEEcCCcccCCCcccCcHHHHHHHHHHHHHhcCc--eEEEEecCCCCcccce---------ee---------ccCCC
Confidence 89999988752 348999999999999999995 5555554321111000 00 00000
Q ss_pred ccccccCcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccchhhhccCceEEEEeeCCcchhhhhhcccccccccC
Q 012436 110 WIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYN 189 (464)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~ 189 (464)
..... ...............+.+++.+||+||++......+ .++..++|+|++.|+...
T Consensus 61 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Divh~~~~~~~~~-~~~~~~~~~v~~~h~~~~---------------- 119 (335)
T cd03802 61 LRLDA----PGRDRAEAEALALAERALAAGDFDIVHNHSLHLPLP-FARPLPVPVVTTLHGPPD---------------- 119 (335)
T ss_pred ccccc----chhhHhhHHHHHHHHHHHhcCCCCEEEecCcccchh-hhcccCCCEEEEecCCCC----------------
Confidence 00000 000011123344555667888999999887766554 666889999999994431
Q ss_pred CCcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCCCCCCCCC
Q 012436 190 NNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEY 269 (464)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~~~~~~~~ 269 (464)
..... ........+.++++|+..++.+... .++.++|||+|.+.+.. ...++
T Consensus 120 --------~~~~~------------~~~~~~~~~~~~~~s~~~~~~~~~~----~~~~vi~ngvd~~~~~~----~~~~~ 171 (335)
T cd03802 120 --------PELLK------------LYYAARPDVPFVSISDAQRRPWPPL----PWVATVHNGIDLDDYPF----RGPKG 171 (335)
T ss_pred --------cccch------------HHHhhCcCCeEEEecHHHHhhcccc----cccEEecCCcChhhCCC----CCCCC
Confidence 00000 1223477789999999998877543 68899999999987764 22345
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcC-CCCcEEEccCCChhH
Q 012436 270 PAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELK-VDGNVEFYKNLLYRD 348 (464)
Q Consensus 270 ~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~-l~~~v~~~g~~~~~~ 348 (464)
..++|+|++.+.||++.+++++++. +++++++|.++.. +.+.....+.. +.++|.|+|++++++
T Consensus 172 ~~i~~~Gr~~~~Kg~~~li~~~~~~---------~~~l~i~G~~~~~------~~~~~~~~~~~~~~~~v~~~G~~~~~~ 236 (335)
T cd03802 172 DYLLFLGRISPEKGPHLAIRAARRA---------GIPLKLAGPVSDP------DYFYREIAPELLDGPDIEYLGEVGGAE 236 (335)
T ss_pred CEEEEEEeeccccCHHHHHHHHHhc---------CCeEEEEeCCCCH------HHHHHHHHHhcccCCcEEEeCCCCHHH
Confidence 7899999999999999999987643 8999999998643 33333333332 457999999999999
Q ss_pred HHHHHhcCcEEEEcCC-CCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecCCHHHHHHHHHHHHcCCHHH
Q 012436 349 LVKLLGGAVVGIHSMI-DEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQNAEEYADAIVKIISMPETE 427 (464)
Q Consensus 349 ~~~~l~~ad~~v~ps~-~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~~~~~la~~i~~l~~~~~~~ 427 (464)
+.++|+.+|++++||. .|++|++++|||+||+|||+++.+|. .|++.+ +.+|++++++++++++|.++.+ .+
T Consensus 237 ~~~~~~~~d~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~~~-~e~i~~---~~~g~l~~~~~~l~~~l~~l~~-~~-- 309 (335)
T cd03802 237 KAELLGNARALLFPILWEEPFGLVMIEAMACGTPVIAFRRGAV-PEVVED---GVTGFLVDSVEELAAAVARADR-LD-- 309 (335)
T ss_pred HHHHHHhCcEEEeCCcccCCcchHHHHHHhcCCCEEEeCCCCc-hhheeC---CCcEEEeCCHHHHHHHHHHHhc-cH--
Confidence 9999999999999996 69999999999999999999999998 788888 7899999999999999999876 43
Q ss_pred HHHHHHHHHHHH-HccCHHHHHHHHHHHHH
Q 012436 428 RLEMAAAARRRA-ARFSEQRFYEDFKAAIR 456 (464)
Q Consensus 428 ~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~ 456 (464)
.+++++.+ ++|||+.+++++.++|+
T Consensus 310 ----~~~~~~~~~~~~s~~~~~~~~~~~y~ 335 (335)
T cd03802 310 ----RAACRRRAERRFSAARMVDDYLALYR 335 (335)
T ss_pred ----HHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 24566667 99999999999999874
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-36 Score=288.51 Aligned_cols=332 Identities=21% Similarity=0.208 Sum_probs=249.0
Q ss_pred CCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeecccccccccCcceeh
Q 012436 42 PNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTM 121 (464)
Q Consensus 42 ~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (464)
+++.. ||+++++.+++++|.+.| ++|.+++... ...... ...++ +++..+... . ..
T Consensus 5 ~~~~~-gG~e~~~~~l~~~L~~~g--~~v~v~~~~~-----~~~~~~-~~~~~------~~~~~~~~~---~---~~--- 60 (355)
T cd03819 5 PALES-GGVERGTLELARALVERG--HRSLVASAGG-----RLVAEL-EAEGS------RHIKLPFIS---K---NP--- 60 (355)
T ss_pred hhhcc-CcHHHHHHHHHHHHHHcC--CEEEEEcCCC-----chHHHH-HhcCC------eEEEccccc---c---ch---
Confidence 44444 699999999999999999 5555555432 111111 11122 222221110 0 00
Q ss_pred hhhchhhhHHHHHHhhhcCCcEEEecccccccch--hhhccCceEEEEeeCCcchhhhhhcccccccccCCCcccccchh
Q 012436 122 IGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNW 199 (464)
Q Consensus 122 ~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~--~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (464)
...+.....+.+.+++.+||+||.++....... .++..++|+++++|....
T Consensus 61 -~~~~~~~~~l~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~-------------------------- 113 (355)
T cd03819 61 -LRILLNVARLRRLIREEKVDIVHARSRAPAWSAYLAARRTRPPFVTTVHGFYS-------------------------- 113 (355)
T ss_pred -hhhHHHHHHHHHHHHHcCCCEEEECCCchhHHHHHHHHhcCCCEEEEeCCchh--------------------------
Confidence 111223445566788899999998775444332 345678999999993210
Q ss_pred hhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCC-CCCeEEecCCCCCCCCccCCCC------------CC
Q 012436 200 LSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLE------------RS 266 (464)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~-~~~i~~i~~~~d~~~~~~~~~~------------~~ 266 (464)
... .++..++.+|.++++|+..++.+.+.++. ..++.++|||+|.+.+...... ..
T Consensus 114 ~~~-----------~~~~~~~~~~~vi~~s~~~~~~~~~~~~~~~~k~~~i~ngi~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (355)
T cd03819 114 VNF-----------RYNAIMARGDRVIAVSNFIADHIRENYGVDPDRIRVIPRGVDLDRFDPGAVPPERILALAREWPLP 182 (355)
T ss_pred hHH-----------HHHHHHHhcCEEEEeCHHHHHHHHHhcCCChhhEEEecCCccccccCccccchHHHHHHHHHcCCC
Confidence 000 12344578999999999999999877766 5689999999998877543221 13
Q ss_pred CCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCh
Q 012436 267 TEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLY 346 (464)
Q Consensus 267 ~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~ 346 (464)
++.++++|+|++.+.||++.+++++..+++.. ++++++++|.++.. ..+.+.+.+.++++++.++|.+.|+.
T Consensus 183 ~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~----~~~~l~ivG~~~~~--~~~~~~~~~~~~~~~~~~~v~~~g~~-- 254 (355)
T cd03819 183 KGKPVILLPGRLTRWKGQEVFIEALARLKKDD----PDVHLLIVGDAQGR--RFYYAELLELIKRLGLQDRVTFVGHC-- 254 (355)
T ss_pred CCceEEEEeeccccccCHHHHHHHHHHHHhcC----CCeEEEEEECCccc--chHHHHHHHHHHHcCCcceEEEcCCc--
Confidence 56688999999999999999999999998864 58999999998653 24456677788888888899999995
Q ss_pred hHHHHHHhcCcEEEEcC-CCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC--CHHHHHHHHHHHHcC
Q 012436 347 RDLVKLLGGAVVGIHSM-IDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ--NAEEYADAIVKIISM 423 (464)
Q Consensus 347 ~~~~~~l~~ad~~v~ps-~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~--~~~~la~~i~~l~~~ 423 (464)
+++.++|+.||++++|| ..|++|++++|||++|+|||+++.++. .+++.+ +.+|++++ |+++++++|..++..
T Consensus 255 ~~~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~~~-~e~i~~---~~~g~~~~~~~~~~l~~~i~~~~~~ 330 (355)
T cd03819 255 SDMPAAYALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHGGA-RETVRP---GETGLLVPPGDAEALAQALDQILSL 330 (355)
T ss_pred ccHHHHHHhCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCCCc-HHHHhC---CCceEEeCCCCHHHHHHHHHHHHhh
Confidence 89999999999999999 799999999999999999999999888 788888 77998875 999999999655543
Q ss_pred CHHHHHHHHHHHHHHH-HccCHHHH
Q 012436 424 PETERLEMAAAARRRA-ARFSEQRF 447 (464)
Q Consensus 424 ~~~~~~~~~~~~~~~~-~~~s~~~~ 447 (464)
++++++++++++++.+ ++|+|+.+
T Consensus 331 ~~~~~~~~~~~a~~~~~~~f~~~~~ 355 (355)
T cd03819 331 LPEGRAKMFAKARMCVETLFSYDRM 355 (355)
T ss_pred CHHHHHHHHHHHHHHHHHhhhhccC
Confidence 8999999999999999 99999853
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-36 Score=288.13 Aligned_cols=360 Identities=18% Similarity=0.179 Sum_probs=254.6
Q ss_pred eEEEecCCCC-CCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeecccccccc
Q 012436 36 SVAFFHPNTN-DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (464)
Q Consensus 36 kI~~~~~~~~-~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (464)
||+++.+.++ ..||+++++.+++++|.+.||++.+++..... ... ..... .. ..........
T Consensus 1 kIl~i~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~--~~~--~~~~~---~~------~~~~~~~~~~---- 63 (375)
T cd03821 1 KILHVIPSFDPKYGGPVRVVLNLSKALAKLGHEVTVATTDAGG--DPL--LVALN---GV------PVKLFSINVA---- 63 (375)
T ss_pred CeEEEcCCCCcccCCeehHHHHHHHHHHhcCCcEEEEecCCCC--ccc--hhhcc---Cc------eeeecccchh----
Confidence 6888888775 44899999999999999999655554433221 111 00000 00 0000000000
Q ss_pred cCcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccc-h---hhhccCceEEEEeeCCcchhhhhhcccccccccCC
Q 012436 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTY-P---LARIFGCRVICYTHYPTISLDMISRVREGSSMYNN 190 (464)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~-~---~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~ 190 (464)
.........+.............++|+|+.+..+.... . .++..++|++++.|.......
T Consensus 64 --~~~~~~~~~~~~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-------------- 127 (375)
T cd03821 64 --YGLNLARYLFPPSLLAWLRLNIREADIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGMLDPWA-------------- 127 (375)
T ss_pred --hhhhhhhhccChhHHHHHHHhCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEccccccccc--------------
Confidence 00000000111112222334456899998765433221 1 444678999999994321000
Q ss_pred CcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCCC-------
Q 012436 191 NASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL------- 263 (464)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~~------- 263 (464)
.......... .....++...+.++.+++.|+......... ....++.++|||+|.+.+...+.
T Consensus 128 -------~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~s~~~~~~~~~~-~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ 197 (375)
T cd03821 128 -------LPHKALKKRL--AWFLFERRLLQAAAAVHATSEQEAAEIRRL-GLKAPIAVIPNGVDIPPFAALPSRGRRRKF 197 (375)
T ss_pred -------cccchhhhHH--HHHHHHHHHHhcCCEEEECCHHHHHHHHhh-CCcccEEEcCCCcChhccCcchhhhhhhhc
Confidence 0000111111 111234666789999999998877777654 33678999999999887764321
Q ss_pred CCCCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccC
Q 012436 264 ERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKN 343 (464)
Q Consensus 264 ~~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~ 343 (464)
....+.++++|+|++.+.||++.+++++..+.++. |+++++++|.+... +...++..++++++.++|.++|+
T Consensus 198 ~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~----~~~~l~i~G~~~~~----~~~~~~~~~~~~~~~~~v~~~g~ 269 (375)
T cd03821 198 PILPDKRIILFLGRLHPKKGLDLLIEAFAKLAERF----PDWHLVIAGPDEGG----YRAELKQIAAALGLEDRVTFTGM 269 (375)
T ss_pred cCCCCCcEEEEEeCcchhcCHHHHHHHHHHhhhhc----CCeEEEEECCCCcc----hHHHHHHHHHhcCccceEEEcCC
Confidence 23456789999999999999999999999998875 68999999987543 33556666688888899999999
Q ss_pred CChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC-CHHHHHHHHHHHHc
Q 012436 344 LLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ-NAEEYADAIVKIIS 422 (464)
Q Consensus 344 ~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~-~~~~la~~i~~l~~ 422 (464)
++++++.++|+.||++++||..|++|++++|||++|+|||+++.++. .+++.+ ..|++.+ +.++++++|.++++
T Consensus 270 ~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~i~~l~~ 344 (375)
T cd03821 270 LYGEDKAAALADADLFVLPSHSENFGIVVAEALACGTPVVTTDKVPW-QELIEY----GCGWVVDDDVDALAAALRRALE 344 (375)
T ss_pred CChHHHHHHHhhCCEEEeccccCCCCcHHHHHHhcCCCEEEcCCCCH-HHHhhc----CceEEeCCChHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999888 677765 6788776 77999999999999
Q ss_pred CCHHHHHHHHHHHHHHH-HccCHHHHHHHHH
Q 012436 423 MPETERLEMAAAARRRA-ARFSEQRFYEDFK 452 (464)
Q Consensus 423 ~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~ 452 (464)
+++.++++++++++.+ ++|+|+.+++++.
T Consensus 345 -~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 374 (375)
T cd03821 345 -LPQRLKAMGENGRALVEERFSWTAIAQQLL 374 (375)
T ss_pred -CHHHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 9999999999999997 9999999999875
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=288.10 Aligned_cols=376 Identities=15% Similarity=0.042 Sum_probs=248.6
Q ss_pred EEEecCCCCCC--CCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeecccc-cc-
Q 012436 37 VAFFHPNTNDG--GGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKW-IE- 112 (464)
Q Consensus 37 I~~~~~~~~~~--GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~- 112 (464)
|+|+++..+.. +|....+++++++|++. |++++++++.+.. .....+..... ...+.+.++..+.. +.
T Consensus 1 iL~~~~~~P~P~~~G~~~r~~~~~~~L~~~-~~v~l~~~~~~~~--~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~ 72 (397)
T TIGR03087 1 ILYLVHRIPYPPNKGDKIRSFHLLRHLAAR-HRVHLGTFVDDPE--DWQYAAALRPL-----CEEVCVVPLDPRVARLRS 72 (397)
T ss_pred CeeecCCCCCCCCCCCcEeHHHHHHHHHhc-CcEEEEEeCCCcc--cHHHHHHHHHH-----hheeEEeecCcHHHHHHH
Confidence 56776555433 56788889999999886 6777776664321 11111111110 11112222211110 00
Q ss_pred ----cccCcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccchhhhccCceEEEEeeCCcchhhhhhccccccccc
Q 012436 113 ----ESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMY 188 (464)
Q Consensus 113 ----~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~ 188 (464)
....|..............+.+++++.++|+||+++.....+...+..++|.|++.|. +....|.. |
T Consensus 73 ~~~l~~~~p~~~~~~~~~~~~~~l~~~~~~~~~D~v~~~~~~~~~~~~~~~~~~p~i~~~~d------~~~~~~~~---~ 143 (397)
T TIGR03087 73 LLGLLTGEPLSLPYYRSRRLARWVNALLAAEPVDAIVVFSSAMAQYVTPHVRGVPRIVDFVD------VDSDKWLQ---Y 143 (397)
T ss_pred HhhhcCCCCCcchhhCCHHHHHHHHHHHhhCCCCEEEEeccccceeccccccCCCeEeehhh------HHHHHHHH---H
Confidence 0000110111111222334455677889999997765333322223568999998882 21111100 0
Q ss_pred CCCcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCC-CCCeEEecCCCCCCCCccCCCCC--
Q 012436 189 NNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLER-- 265 (464)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~-~~~i~~i~~~~d~~~~~~~~~~~-- 265 (464)
... .........+...+.+..+++.+++.+|.++++|+..++.+.+.++. ..++.++|||+|.+.|.+.....
T Consensus 144 ~~~----~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~~S~~~~~~l~~~~~~~~~~v~vipngvd~~~f~~~~~~~~~ 219 (397)
T TIGR03087 144 ART----KRWPLRWIYRREGRLLLAYERAIAARFDAATFVSRAEAELFRRLAPEAAGRITAFPNGVDADFFSPDRDYPNP 219 (397)
T ss_pred Hhc----cCcchhHHHHHHHHHHHHHHHHHHhhCCeEEEcCHHHHHHHHHhCCCCCCCeEEeecccchhhcCCCccccCC
Confidence 000 00001111111224455678899999999999999999999877543 56899999999998776432211
Q ss_pred -CCCCcEEEEEeccCCCCChHHHHH----HHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEE
Q 012436 266 -STEYPAIISVAQFRPEKAHPLQLE----AFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEF 340 (464)
Q Consensus 266 -~~~~~~i~~~G~~~~~K~~~~ll~----a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~ 340 (464)
..+..+++|+|++.+.||++.+++ ++..+.+.. |+++|+|+|+++. +++++ ++..++|+|
T Consensus 220 ~~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~----p~~~l~ivG~g~~-------~~~~~----l~~~~~V~~ 284 (397)
T TIGR03087 220 YPPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARR----PAAEFYIVGAKPS-------PAVRA----LAALPGVTV 284 (397)
T ss_pred CCCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHC----CCcEEEEECCCCh-------HHHHH----hccCCCeEE
Confidence 134578999999999999999885 444555544 6999999999863 23333 333568999
Q ss_pred ccCCChhHHHHHHhcCcEEEEcCC-CCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC-CHHHHHHHHH
Q 012436 341 YKNLLYRDLVKLLGGAVVGIHSMI-DEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ-NAEEYADAIV 418 (464)
Q Consensus 341 ~g~~~~~~~~~~l~~ad~~v~ps~-~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~-~~~~la~~i~ 418 (464)
+|+++ ++..+|+.||++++||. .||+|++++|||+||+|||+|+.++ +.+... +++|++++ |+++++++|.
T Consensus 285 ~G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~--~~i~~~---~~~g~lv~~~~~~la~ai~ 357 (397)
T TIGR03087 285 TGSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAA--EGIDAL---PGAELLVAADPADFAAAIL 357 (397)
T ss_pred eeecC--CHHHHHHhCCEEEecccccCCcccHHHHHHHcCCCEEecCccc--cccccc---CCcceEeCCCHHHHHHHHH
Confidence 99994 78999999999999996 6999999999999999999999753 233333 46787775 9999999999
Q ss_pred HHHcCCHHHHHHHHHHHHHHH-HccCHHHHHHHHHHHHH
Q 012436 419 KIISMPETERLEMAAAARRRA-ARFSEQRFYEDFKAAIR 456 (464)
Q Consensus 419 ~l~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~ 456 (464)
++++ |++.++++++++++.+ ++|||+..++++.++++
T Consensus 358 ~ll~-~~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~ 395 (397)
T TIGR03087 358 ALLA-NPAEREELGQAARRRVLQHYHWPRNLARLDALLE 395 (397)
T ss_pred HHHc-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhc
Confidence 9999 9999999999999999 89999999999998875
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-36 Score=291.81 Aligned_cols=368 Identities=14% Similarity=0.146 Sum_probs=247.0
Q ss_pred ccceEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeecccccc
Q 012436 33 RTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIE 112 (464)
Q Consensus 33 ~~mkI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (464)
+++||++++... +|.+..+.+++++|++.||+|+++...... .. .......+ +.++.+..+.. .
T Consensus 2 ~~~~~~~~~~~~---~~~~~R~~~~a~~L~~~G~~V~ii~~~~~~---~~---~~~~~~~~------v~~~~~~~~~~-~ 65 (415)
T cd03816 2 KRKRVCVLVLGD---IGRSPRMQYHALSLAKHGWKVDLVGYLETP---PH---DEILSNPN------ITIHPLPPPPQ-R 65 (415)
T ss_pred CccEEEEEEecc---cCCCHHHHHHHHHHHhcCceEEEEEecCCC---CC---HHHhcCCC------EEEEECCCCcc-c
Confidence 346777776543 477777789999999999666655443211 11 11011112 24444433210 0
Q ss_pred cccCcce-ehhhhchhhhHH-HHHHhhhcCCcEEEecccccccc---h--hhhccCceEEEEeeCCcchhhhhhcccccc
Q 012436 113 ESTYPRF-TMIGQSFGSVYL-SWEALCKFTPLYYFDTSGYAFTY---P--LARIFGCRVICYTHYPTISLDMISRVREGS 185 (464)
Q Consensus 113 ~~~~~~~-~~~~~~~~~~~~-~~~~l~~~~~Dvv~~~~~~~~~~---~--~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~ 185 (464)
....++. ......+..... .+.+++..+||+||.+....... . +++..++|+|+++|..... ....
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Dvi~~~~~~~~~~~~~a~~~~~~~~~~~V~~~h~~~~~--~~~~----- 138 (415)
T cd03816 66 LNKLPFLLFAPLKVLWQFFSLLWLLYKLRPADYILIQNPPSIPTLLIAWLYCLLRRTKLIIDWHNYGYT--ILAL----- 138 (415)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHhCCeEEEEcCCchHH--HHhc-----
Confidence 0000110 000111111112 22235667899999766433211 1 3446799999999932100 0000
Q ss_pred cccCCCcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCCCC-
Q 012436 186 SMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLE- 264 (464)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~~~- 264 (464)
... ......+.+.++++.+++.+|.++++|+.+++.+.+.....+++.+||||.+ ..+.+.+..
T Consensus 139 ------------~~~--~~~~~~~~~~~~e~~~~~~ad~ii~vS~~~~~~l~~~~~~~~ki~vI~Ng~~-~~f~p~~~~~ 203 (415)
T cd03816 139 ------------KLG--ENHPLVRLAKWYEKLFGRLADYNLCVTKAMKEDLQQFNNWKIRATVLYDRPP-EQFRPLPLEE 203 (415)
T ss_pred ------------ccC--CCCHHHHHHHHHHHHHhhcCCEeeecCHHHHHHHHhhhccCCCeeecCCCCH-HHceeCcHHH
Confidence 000 0111234566778888999999999999999999874333789999999843 333321100
Q ss_pred ------------------------CCCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcC--CCCCcEEEEEcCCCCCcc
Q 012436 265 ------------------------RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDA--DLPRPRLQFVGSCRNKSD 318 (464)
Q Consensus 265 ------------------------~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~--~~p~~~l~i~G~~~~~~~ 318 (464)
..++..+++++|++.+.||++.+++|+..+.+.... ..|+++|+|+|+|+..
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~G~~~-- 281 (415)
T cd03816 204 KHELFLKLAKTFLTRELRIGAVQLSEERPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKLLCIITGKGPLK-- 281 (415)
T ss_pred HHHHHHhccccccccccccccceecCCCceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCEEEEEEecCccH--
Confidence 013345788899999999999999999998763210 1157999999999753
Q ss_pred HHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHHHhcCcEEEEcC---CCCCCChHHHHHHHhCCcEEEeCCCCCcccee
Q 012436 319 EERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSM---IDEHFGISVVEYMAAGAIPIAHNSAGPKMDIV 395 (464)
Q Consensus 319 ~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps---~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v 395 (464)
+++++.++++++.+.+.+.|+++.+++.++|+.||+++.|+ ..+++|++++||||||+|||+++.++. .|++
T Consensus 282 ----~~l~~~~~~~~l~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~-~eiv 356 (415)
T cd03816 282 ----EKYLERIKELKLKKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCI-DELV 356 (415)
T ss_pred ----HHHHHHHHHcCCCcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCH-HHHh
Confidence 78899999999875444567899999999999999998753 347899999999999999999999887 7999
Q ss_pred cccCCccceeecCCHHHHHHHHHHHHcCC---HHHHHHHHHHHHHHHHccCHHHHHHH
Q 012436 396 LEEDGQQTGFLAQNAEEYADAIVKIISMP---ETERLEMAAAARRRAARFSEQRFYED 450 (464)
Q Consensus 396 ~~~~~~~~g~~~~~~~~la~~i~~l~~~~---~~~~~~~~~~~~~~~~~~s~~~~~~~ 450 (464)
.+ +.+|++++|+++++++|.++++ | ++.+++|++++++.. +++|++...+
T Consensus 357 ~~---~~~G~lv~d~~~la~~i~~ll~-~~~~~~~~~~m~~~~~~~~-~~~~~~~~~~ 409 (415)
T cd03816 357 KH---GENGLVFGDSEELAEQLIDLLS-NFPNRGKLNSLKKGAQEES-ELRWDENWDR 409 (415)
T ss_pred cC---CCCEEEECCHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHhh-hcCHHHHHHH
Confidence 98 8999999999999999999999 8 899999999999876 5566555444
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-36 Score=289.09 Aligned_cols=348 Identities=24% Similarity=0.296 Sum_probs=240.4
Q ss_pred eEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeeccccccccc
Q 012436 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (464)
Q Consensus 36 kI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (464)
||+++|+++...||+|+++.++++.|.+ +++.+...+........ .. . .+ ............
T Consensus 1 ~i~~~~~~~~~~GG~E~~~~~l~~~l~~----~~v~~~~~~~~~~~~~~-~~--~--~~------~~~~~~~~~~~~--- 62 (351)
T cd03804 1 KVAIVHDWLVNIGGGEKVVEALARLFPD----ADIFTLVDDPDKLPRLL-RL--K--KI------RTSFIQKLPFAR--- 62 (351)
T ss_pred CEEEEEeccccCCCHHHHHHHHHHhCCC----CCEEEEeecCCccchhh-cC--C--ce------eechhhhchhhH---
Confidence 7999999998789999999999998854 44444433221111100 00 0 00 000000000000
Q ss_pred CcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccchhhhccCceEEEEeeCCcchhhhhhcccccccccCCCcccc
Q 012436 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIA 195 (464)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~ 195 (464)
..+ .........+.+.+...++|+|++++..... .+.+..++|.+.++|.|. +..++..+.|......
T Consensus 63 -~~~---~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~-~~~~~~~~~~~~~~h~~~------~~~~~~~~~~~~~~~~- 130 (351)
T cd03804 63 -RRY---RKYLPLMPLAIEQFDLSGYDLVISSSHAVAK-GVITRPDQLHICYCHTPM------RYAWDLYHDYLKESGL- 130 (351)
T ss_pred -hhH---hhhCchhhHHHHhccccCCCEEEEcCcHHhc-cccCCCCCcEEEEeCCch------HHHhcCchHhhhhccc-
Confidence 000 1111223334455667789999876553322 233567899999999654 1222222222211111
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCCCCCCCCCcEEEEE
Q 012436 196 QSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISV 275 (464)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~~~~~~~~~~i~~~ 275 (464)
............+...++..++++|.++++|+.+++.+.+.++ .+..+++||+|.+.+...+ .....++|+
T Consensus 131 ---~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~--~~~~vi~~~~d~~~~~~~~----~~~~~il~~ 201 (351)
T cd03804 131 ---GKRLALRLLLHYLRIWDRRSAARVDYFIANSRFVARRIKKYYG--RDATVIYPPVDTDRFTPAE----EKEDYYLSV 201 (351)
T ss_pred ---chhhHHHHHHHHHHHHHHHHhcCCCEEEECCHHHHHHHHHHhC--CCcEEECCCCCHhhcCcCC----CCCCEEEEE
Confidence 1111113344455566778889999999999999999988774 4567899999988775322 234679999
Q ss_pred eccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHHHhc
Q 012436 276 AQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGG 355 (464)
Q Consensus 276 G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ 355 (464)
|++.+.||++.+++|++.+ | ++|+++|+|+.. +++++ +..++|.|+|+++++++.++|++
T Consensus 202 G~~~~~K~~~~li~a~~~~--------~-~~l~ivG~g~~~------~~l~~-----~~~~~V~~~g~~~~~~~~~~~~~ 261 (351)
T cd03804 202 GRLVPYKRIDLAIEAFNKL--------G-KRLVVIGDGPEL------DRLRA-----KAGPNVTFLGRVSDEELRDLYAR 261 (351)
T ss_pred EcCccccChHHHHHHHHHC--------C-CcEEEEECChhH------HHHHh-----hcCCCEEEecCCCHHHHHHHHHh
Confidence 9999999999999999876 3 899999998642 34443 34679999999999999999999
Q ss_pred CcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC--CHHHHHHHHHHHHcCCHHHHHHHHH
Q 012436 356 AVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ--NAEEYADAIVKIISMPETERLEMAA 433 (464)
Q Consensus 356 ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~--~~~~la~~i~~l~~~~~~~~~~~~~ 433 (464)
||++++||. |++|++++|||+||+|||+++.++. .+++.+ +.+|++++ |+++++++|.++++ |++ .+.+
T Consensus 262 ad~~v~ps~-e~~g~~~~Eama~G~Pvi~~~~~~~-~e~i~~---~~~G~~~~~~~~~~la~~i~~l~~-~~~---~~~~ 332 (351)
T cd03804 262 ARAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGA-LETVID---GVTGILFEEQTVESLAAAVERFEK-NED---FDPQ 332 (351)
T ss_pred CCEEEECCc-CCCCchHHHHHHcCCCEEEeCCCCC-cceeeC---CCCEEEeCCCCHHHHHHHHHHHHh-Ccc---cCHH
Confidence 999999999 9999999999999999999999988 788888 88999885 89999999999998 874 2334
Q ss_pred HHHHHHHccCHHHHHHHH
Q 012436 434 AARRRAARFSEQRFYEDF 451 (464)
Q Consensus 434 ~~~~~~~~~s~~~~~~~~ 451 (464)
+.++.+++|+|+++.+++
T Consensus 333 ~~~~~~~~~~~~~~~~~~ 350 (351)
T cd03804 333 AIRAHAERFSESRFREKI 350 (351)
T ss_pred HHHHHHHhcCHHHHHHHh
Confidence 445555779999998775
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-36 Score=288.24 Aligned_cols=361 Identities=23% Similarity=0.250 Sum_probs=271.9
Q ss_pred eEEEecCCCCCC-CCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeecccccccc
Q 012436 36 SVAFFHPNTNDG-GGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (464)
Q Consensus 36 kI~~~~~~~~~~-GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (464)
||+++++..++. ||+..++..++++|.+.|+++. +++........... .. .. ..... .
T Consensus 1 kI~ii~~~~~~~~~G~~~~~~~l~~~L~~~g~~v~--i~~~~~~~~~~~~~--~~---~~------~~~~~--------~ 59 (374)
T cd03801 1 KILLVTPEYPPSVGGAERHVLELARALAARGHEVT--VLTPGDGGLPDEEE--VG---GI------VVVRP--------P 59 (374)
T ss_pred CeeEEecccCCccCcHhHHHHHHHHHHHhcCceEE--EEecCCCCCCceee--ec---Cc------ceecC--------C
Confidence 688888877766 8999999999999999995554 44443211111000 00 00 00000 0
Q ss_pred cCcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccch--hhhccCceEEEEeeCCcchhhhhhcccccccccCCCc
Q 012436 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (464)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~--~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~ 192 (464)
...................+.+++.+||+|+.+........ .++..++|+++++|.......
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~---------------- 123 (374)
T cd03801 60 PLLRVRRLLLLLLLALRLRRLLRRERFDVVHAHDWLALLAAALAARLLGIPLVLTVHGLEFGRP---------------- 123 (374)
T ss_pred cccccchhHHHHHHHHHHHHHhhhcCCcEEEEechhHHHHHHHHHHhcCCcEEEEeccchhhcc----------------
Confidence 00011111111223344556677889999997776555443 455789999999994331000
Q ss_pred ccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCC-CCeEEecCCCCCCCCcc------CCCCC
Q 012436 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIP-DRIKRVYPPCDTSGLQV------LPLER 265 (464)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~-~~i~~i~~~~d~~~~~~------~~~~~ 265 (464)
.. ............++..++.+|.+++.|+...+.+.+.++.. .++.++|||++...+.. .....
T Consensus 124 -------~~-~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 195 (374)
T cd03801 124 -------GN-ELGLLLKLARALERRALRRADRIIAVSEATREELRELGGVPPEKITVIPNGVDTERFRPAPRAARRRLGI 195 (374)
T ss_pred -------cc-chhHHHHHHHHHHHHHHHhCCEEEEecHHHHHHHHhcCCCCCCcEEEecCcccccccCccchHHHhhcCC
Confidence 00 01222334445567778999999999999999999987653 68999999999887643 12333
Q ss_pred CCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCC
Q 012436 266 STEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLL 345 (464)
Q Consensus 266 ~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~ 345 (464)
..+.++++|+|++...||++.+++++..+.+.. |+++++++|.++ ..+.+++.+++++..++|.+.|+++
T Consensus 196 ~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~----~~~~l~i~G~~~------~~~~~~~~~~~~~~~~~v~~~g~~~ 265 (374)
T cd03801 196 PEDEPVILFVGRLVPRKGVDLLLEALAKLRKEY----PDVRLVIVGDGP------LREELEALAAELGLGDRVTFLGFVP 265 (374)
T ss_pred cCCCeEEEEecchhhhcCHHHHHHHHHHHhhhc----CCeEEEEEeCcH------HHHHHHHHHHHhCCCcceEEEeccC
Confidence 456689999999999999999999999998776 589999999764 3467777778888889999999999
Q ss_pred hhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC--CHHHHHHHHHHHHcC
Q 012436 346 YRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ--NAEEYADAIVKIISM 423 (464)
Q Consensus 346 ~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~--~~~~la~~i~~l~~~ 423 (464)
++++.++|+.||++++|+..|++|++++|||++|+|||+++.++. .+++.+ +.+|++++ |+++++++|.++++
T Consensus 266 ~~~~~~~~~~~di~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~~~~-~~~~~~---~~~g~~~~~~~~~~l~~~i~~~~~- 340 (374)
T cd03801 266 DEDLPALYAAADVFVLPSLYEGFGLVLLEAMAAGLPVVASDVGGI-PEVVED---GETGLLVPPGDPEALAEAILRLLD- 340 (374)
T ss_pred hhhHHHHHHhcCEEEecchhccccchHHHHHHcCCcEEEeCCCCh-hHHhcC---CcceEEeCCCCHHHHHHHHHHHHc-
Confidence 999999999999999999999999999999999999999999888 788887 78998886 68999999999999
Q ss_pred CHHHHHHHHHHHHHHH-HccCHHHHHHHHHHHHH
Q 012436 424 PETERLEMAAAARRRA-ARFSEQRFYEDFKAAIR 456 (464)
Q Consensus 424 ~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~ 456 (464)
|++.++++++++++.+ +.|+|+.+++++.++++
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (374)
T cd03801 341 DPELRRRLGEAARERVAERFSWDRVAARTEEVYY 374 (374)
T ss_pred ChHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhC
Confidence 9999999999999777 99999999999998763
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=286.45 Aligned_cols=360 Identities=18% Similarity=0.232 Sum_probs=257.8
Q ss_pred eEEEecCCCC-CCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeecccccccc
Q 012436 36 SVAFFHPNTN-DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (464)
Q Consensus 36 kI~~~~~~~~-~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (464)
||++++.+++ ..||++..+..++++|.+.||++. +++......... .... .+ ........
T Consensus 1 kil~~~~~~~p~~~G~~~~~~~l~~~L~~~g~~v~--v~~~~~~~~~~~--~~~~---~~------~~~~~~~~------ 61 (374)
T cd03817 1 KIGIFTDTYLPQVNGVATSIRRLAEELEKRGHEVY--VVAPSYPGAPEE--EEVV---VV------RPFRVPTF------ 61 (374)
T ss_pred CeeEeehhccCCCCCeehHHHHHHHHHHHcCCeEE--EEeCCCCCCCcc--cccc---cc------cccccccc------
Confidence 6888876654 448999999999999999995555 444332111000 0000 00 00000000
Q ss_pred cCcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccch---hhhccCceEEEEeeCCcchhhhhhcccccccccCCC
Q 012436 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP---LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNN 191 (464)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~---~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~ 191 (464)
....... .........+.+++.+||+||.+..+..... +++..++|++.+.|.... +.....
T Consensus 62 ~~~~~~~---~~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~---------- 126 (374)
T cd03817 62 KYPDFRL---PLPIPRALIIILKELGPDIVHTHTPFSLGLLGLRVARKLGIPVVATYHTMYE--DYTHYV---------- 126 (374)
T ss_pred hhhhhhc---cccHHHHHHHHHhhcCCCEEEECCchhhhhHHHHHHHHcCCCEEEEecCCHH--HHHHHH----------
Confidence 0001101 1112223344577889999997765443222 455789999999994321 110000
Q ss_pred cccccchhhhHHHHHHHHHHH-HHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCCC-------
Q 012436 192 ASIAQSNWLSQCKIVYYTFFS-WMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL------- 263 (464)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~~------- 263 (464)
............ ..++..++.+|.++++|+..++.+.+. +...++.++|+|+|...+...+.
T Consensus 127 ---------~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~~~~~~-~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ 196 (374)
T cd03817 127 ---------PLGRLLARAVVRRKLSRRFYNRCDAVIAPSEKIADLLREY-GVKRPIEVIPTGIDLDRFEPVDGDDERRKL 196 (374)
T ss_pred ---------hcccchhHHHHHHHHHHHHhhhCCEEEeccHHHHHHHHhc-CCCCceEEcCCccchhccCccchhHHHHhc
Confidence 000001111111 566788899999999999999998775 44667899999999887664332
Q ss_pred CCCCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccC
Q 012436 264 ERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKN 343 (464)
Q Consensus 264 ~~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~ 343 (464)
...+++++++++|++.+.||++.++++++.+.++. ++++++++|+++. .+.+++.++++++.++|.++|+
T Consensus 197 ~~~~~~~~i~~~G~~~~~k~~~~l~~~~~~~~~~~----~~~~l~i~G~~~~------~~~~~~~~~~~~~~~~v~~~g~ 266 (374)
T cd03817 197 GIPEDEPVLLYVGRLAKEKNIDFLIRAFARLLKEE----PDVKLVIVGDGPE------REELEELARELGLADRVIFTGF 266 (374)
T ss_pred CCCCCCeEEEEEeeeecccCHHHHHHHHHHHHHhC----CCeEEEEEeCCch------HHHHHHHHHHcCCCCcEEEecc
Confidence 12356689999999999999999999999998774 5899999998863 3678888888888899999999
Q ss_pred CChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC-CHHHHHHHHHHHHc
Q 012436 344 LLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ-NAEEYADAIVKIIS 422 (464)
Q Consensus 344 ~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~-~~~~la~~i~~l~~ 422 (464)
++++++.++|+.||++++||..|++|++++|||++|+|||+++.++. .+++.+ +.+|++++ +.++++++|.++++
T Consensus 267 ~~~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~~~-~~~i~~---~~~g~~~~~~~~~~~~~i~~l~~ 342 (374)
T cd03817 267 VPREELPDYYKAADLFVFASTTETQGLVLLEAMAAGLPVVAVDAPGL-PDLVAD---GENGFLFPPGDEALAEALLRLLQ 342 (374)
T ss_pred CChHHHHHHHHHcCEEEecccccCcChHHHHHHHcCCcEEEeCCCCh-hhheec---CceeEEeCCCCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999987 788888 89999987 33399999999999
Q ss_pred CCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Q 012436 423 MPETERLEMAAAARRRAARFSEQRFYEDFKAAIRP 457 (464)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 457 (464)
+++.++++++++++.+++++ ..+++.+++++
T Consensus 343 -~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 373 (374)
T cd03817 343 -DPELRRRLSKNAEESAEKFS---FAKKVEKLYEE 373 (374)
T ss_pred -ChHHHHHHHHHHHHHHHHHH---HHHHHHHHHhc
Confidence 99999999999999986555 55666666654
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-36 Score=288.32 Aligned_cols=351 Identities=23% Similarity=0.208 Sum_probs=253.3
Q ss_pred eEEEecCCCCCC-CCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeecccccccc
Q 012436 36 SVAFFHPNTNDG-GGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (464)
Q Consensus 36 kI~~~~~~~~~~-GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (464)
||+++++.+++. ||+++.+..++++|.+.||+ |.+++.......... . . .. .+.......
T Consensus 1 kIl~i~~~~~p~~~G~~~~~~~l~~~L~~~g~~--v~~~~~~~~~~~~~~-~---~--~~------~~~~~~~~~----- 61 (364)
T cd03814 1 RIAIVTDTFLPQVNGVVRTLQRLVEHLRARGHE--VLVIAPGPFRESEGP-A---R--VV------PVPSVPLPG----- 61 (364)
T ss_pred CeEEEecccCccccceehHHHHHHHHHHHCCCE--EEEEeCCchhhccCC-C---C--ce------eecccccCc-----
Confidence 688888777665 89999999999999999955 455554321000000 0 0 00 000000000
Q ss_pred cCcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccc---hhhhccCceEEEEeeCCcchhhhhhcccccccccCCC
Q 012436 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTY---PLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNN 191 (464)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~---~~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~ 191 (464)
+.... ..+.......+.+++.+||+||.+....... .+++..++|++.+.|.... ....
T Consensus 62 -~~~~~---~~~~~~~~~~~~~~~~~pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~--------- 123 (364)
T cd03814 62 -YPEIR---LALPPRRRVRRLLDAFAPDVVHIATPGPLGLAALRAARRLGIPVVTSYHTDFP-----EYLR--------- 123 (364)
T ss_pred -ccceE---ecccchhhHHHHHHhcCCCEEEEeccchhhHHHHHHHHHcCCCEEEEEecChH-----HHhh---------
Confidence 00000 0112233445557788999998665433221 1555789999999994221 0000
Q ss_pred cccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCCCCC------
Q 012436 192 ASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLER------ 265 (464)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~~~~------ 265 (464)
...............+.+.+.+|.+++.|+...+.+.+.. ..++.++++|+|.+.+.+.....
T Consensus 124 ---------~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 192 (364)
T cd03814 124 ---------YYGLGPLSWLAWAYLRWFHNRADRVLVPSPSLADELRARG--FRRVRLWPRGVDTELFHPRRRDEALRARL 192 (364)
T ss_pred ---------hcccchHhHhhHHHHHHHHHhCCEEEeCCHHHHHHHhccC--CCceeecCCCccccccCcccccHHHHHHh
Confidence 0000111122234556677999999999999999765543 56888999999987665322111
Q ss_pred -CCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCC
Q 012436 266 -STEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNL 344 (464)
Q Consensus 266 -~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~ 344 (464)
..+.+.++|+|++...||++.++++++.+.++ ++++++++|.++.. +.++ +..++|.+.|++
T Consensus 193 ~~~~~~~i~~~G~~~~~k~~~~~i~~~~~l~~~-----~~~~l~i~G~~~~~------~~~~------~~~~~v~~~g~~ 255 (364)
T cd03814 193 GPPDRPVLLYVGRLAPEKNLEALLDADLPLRRR-----PPVRLVIVGDGPAR------ARLE------ARYPNVHFLGFL 255 (364)
T ss_pred CCCCCeEEEEEeccccccCHHHHHHHHHHhhhc-----CCceEEEEeCCchH------HHHh------ccCCcEEEEecc
Confidence 13457899999999999999999999999765 38999999988643 2232 335789999999
Q ss_pred ChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC--CHHHHHHHHHHHHc
Q 012436 345 LYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ--NAEEYADAIVKIIS 422 (464)
Q Consensus 345 ~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~--~~~~la~~i~~l~~ 422 (464)
+.+++.++|+.||++++||..|++|++++|||+||+|||+++.++. .+++.+ +.+|++++ |.++++++|.++++
T Consensus 256 ~~~~~~~~~~~~d~~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~~-~~~i~~---~~~g~~~~~~~~~~l~~~i~~l~~ 331 (364)
T cd03814 256 DGEELAAAYASADVFVFPSRTETFGLVVLEAMASGLPVVAPDAGGP-ADIVTD---GENGLLVEPGDAEAFAAALAALLA 331 (364)
T ss_pred CHHHHHHHHHhCCEEEECcccccCCcHHHHHHHcCCCEEEcCCCCc-hhhhcC---CcceEEcCCCCHHHHHHHHHHHHc
Confidence 9999999999999999999999999999999999999999999988 788887 78999886 88899999999999
Q ss_pred CCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q 012436 423 MPETERLEMAAAARRRAARFSEQRFYEDFKAAIR 456 (464)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 456 (464)
|++.++++++++++.+++|+|+.+++++.++|+
T Consensus 332 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (364)
T cd03814 332 -DPELRRRMAARARAEAERRSWEAFLDNLLEAYR 364 (364)
T ss_pred -CHHHHHHHHHHHHHHHhhcCHHHHHHHHHHhhC
Confidence 999999999999998888999999999998873
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-36 Score=287.73 Aligned_cols=334 Identities=16% Similarity=0.154 Sum_probs=239.1
Q ss_pred eEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeeccccccccc
Q 012436 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (464)
Q Consensus 36 kI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (464)
||+++++++ ..||+++++.+++++|.+.|+++++++..... ....... ...++ .++..+.+.
T Consensus 1 kIl~~~~~~-~~GG~~~~~~~l~~~L~~~~~~v~~i~~~~~~----~~~~~~~-~~~~~------~~~~~~~~~------ 62 (358)
T cd03812 1 KILHIVGTM-NRGGIETFIMNYYRNLDRSKIQFDFLVTSKEE----GDYDDEI-EKLGG------KIYYIPARK------ 62 (358)
T ss_pred CEEEEeCCC-CCccHHHHHHHHHHhcCccceEEEEEEeCCCC----cchHHHH-HHcCC------eEEEecCCC------
Confidence 789999988 55799999999999999999555544433221 1111111 11222 222211110
Q ss_pred CcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccch--hhhccCceE-EEEeeCCcchhhhhhcccccccccCCCc
Q 012436 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LARIFGCRV-ICYTHYPTISLDMISRVREGSSMYNNNA 192 (464)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~--~~~~~~~p~-v~~~h~p~~~~~~~~~~~~~~~~~~~~~ 192 (464)
. ..........+.+++.+||+||.+......+. +++..+.|. +.+.|......
T Consensus 63 -~------~~~~~~~~~~~~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~----------------- 118 (358)
T cd03812 63 -K------NPLKYFKKLYKLIKKNKYDIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSH----------------- 118 (358)
T ss_pred -c------cHHHHHHHHHHHHhcCCCCEEEEeCcchhHHHHHHHhhCCCCeEEEEeccccccc-----------------
Confidence 0 00122334445677889999997766433322 334456665 45566322100
Q ss_pred ccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCCC--------C
Q 012436 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL--------E 264 (464)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~~--------~ 264 (464)
..... ... ..++++...+.+|.++++|+..++.+.+. ....++.++|||+|.+.+...+. .
T Consensus 119 -----~~~~~---~~~--~~~~~~~~~~~~~~~i~~s~~~~~~~~~~-~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~ 187 (358)
T cd03812 119 -----DKKKK---ILK--YKVLRKLINRLATDYLACSEEAGKWLFGK-VKNKKFKVIPNGIDLEKFIFNEEIRKKRRELG 187 (358)
T ss_pred -----cccch---hhH--HHHHHHHHHhcCCEEEEcCHHHHHHHHhC-CCcccEEEEeccCcHHHcCCCchhhhHHHHcC
Confidence 00000 000 03445667789999999999999988775 33678999999999876653222 1
Q ss_pred CCCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCC
Q 012436 265 RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNL 344 (464)
Q Consensus 265 ~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~ 344 (464)
...++++|+|+|++.+.||++.+++++..+.++. |+++++++|+|+.. +.+++.++++++.++|.++|+.
T Consensus 188 ~~~~~~~i~~vGr~~~~Kg~~~li~a~~~l~~~~----~~~~l~ivG~g~~~------~~~~~~~~~~~~~~~v~~~g~~ 257 (358)
T cd03812 188 ILEDKFVIGHVGRFSEQKNHEFLIEIFAELLKKN----PNAKLLLVGDGELE------EEIKKKVKELGLEDKVIFLGVR 257 (358)
T ss_pred CCCCCEEEEEEeccccccChHHHHHHHHHHHHhC----CCeEEEEEeCCchH------HHHHHHHHhcCCCCcEEEeccc
Confidence 2356789999999999999999999999998876 69999999998643 6788888889999999999994
Q ss_pred ChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC-CHHHHHHHHHHHHcC
Q 012436 345 LYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ-NAEEYADAIVKIISM 423 (464)
Q Consensus 345 ~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~-~~~~la~~i~~l~~~ 423 (464)
+++.++|+.||++++||..|++|++++|||++|+|||+|+.++. .+++.+ +..++..+ ++++++++|.++++
T Consensus 258 --~~~~~~~~~adi~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~~-~~~i~~---~~~~~~~~~~~~~~a~~i~~l~~- 330 (358)
T cd03812 258 --NDVPELLQAMDVFLFPSLYEGLPLVLIEAQASGLPCILSDTITK-EVDLTD---LVKFLSLDESPEIWAEEILKLKS- 330 (358)
T ss_pred --CCHHHHHHhcCEEEecccccCCCHHHHHHHHhCCCEEEEcCCch-hhhhcc---CccEEeCCCCHHHHHHHHHHHHh-
Confidence 88999999999999999999999999999999999999999998 677776 44444444 78999999999999
Q ss_pred CHHHHHHHHHHHHHHH
Q 012436 424 PETERLEMAAAARRRA 439 (464)
Q Consensus 424 ~~~~~~~~~~~~~~~~ 439 (464)
|++.++++...+....
T Consensus 331 ~~~~~~~~~~~~~~~~ 346 (358)
T cd03812 331 EDRRERSSESIKKKGL 346 (358)
T ss_pred Ccchhhhhhhhhhccc
Confidence 9999888877776544
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=284.43 Aligned_cols=343 Identities=19% Similarity=0.194 Sum_probs=250.1
Q ss_pred eEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeeccccccccc
Q 012436 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (464)
Q Consensus 36 kI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (464)
||+++++..+. ||+++++.+++++|.+.||+++++...+.. . ...... .. ....+....
T Consensus 1 ~il~~~~~~~~-gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~--~-~~~~~~-----~~------~~~~~~~~~------ 59 (360)
T cd04951 1 KILYVITGLGL-GGAEKQVVDLADQFVAKGHQVAIISLTGES--E-VKPPID-----AT------IILNLNMSK------ 59 (360)
T ss_pred CeEEEecCCCC-CCHHHHHHHHHHhcccCCceEEEEEEeCCC--C-ccchhh-----cc------ceEEecccc------
Confidence 57888777654 599999999999999999766655544322 1 110000 00 000111000
Q ss_pred CcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccch-hhh--ccCceEEEEeeCCcchhhhhhcccccccccCCCc
Q 012436 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-LAR--IFGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (464)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~-~~~--~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~ 192 (464)
.....+.......+.+++.+||+||.+...+.... +.+ ..+.|++.+.|....
T Consensus 60 -----~~~~~~~~~~~~~~~~~~~~pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~------------------- 115 (360)
T cd04951 60 -----NPLSFLLALWKLRKILRQFKPDVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNE------------------- 115 (360)
T ss_pred -----cchhhHHHHHHHHHHHHhcCCCEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCc-------------------
Confidence 00111233445566788899999998766544332 222 356788998883210
Q ss_pred ccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCC-CCCeEEecCCCCCCCCccCCC--------
Q 012436 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPL-------- 263 (464)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~-~~~i~~i~~~~d~~~~~~~~~-------- 263 (464)
... ...+..+...+.++.++++|+...+.+.+.+.. ..++.++|||+|.+.+.....
T Consensus 116 -------~~~-------~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~i~ng~~~~~~~~~~~~~~~~~~~ 181 (360)
T cd04951 116 -------GGR-------LRMLAYRLTDFLSDLTTNVSKEALDYFIASKAFNANKSFVVYNGIDTDRFRKDPARRLKIRNA 181 (360)
T ss_pred -------hhH-------HHHHHHHHHhhccCceEEEcHHHHHHHHhccCCCcccEEEEccccchhhcCcchHHHHHHHHH
Confidence 000 111223444467888999999999999887544 578999999999876653221
Q ss_pred -CCCCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEcc
Q 012436 264 -ERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYK 342 (464)
Q Consensus 264 -~~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g 342 (464)
...+++++++++|++.+.||++.+++++..+.++. |+++|+++|+|+.. +++++.++++++.++|.+.|
T Consensus 182 ~~~~~~~~~~l~~g~~~~~kg~~~li~a~~~l~~~~----~~~~l~i~G~g~~~------~~~~~~~~~~~~~~~v~~~g 251 (360)
T cd04951 182 LGVKNDTFVILAVGRLVEAKDYPNLLKAFAKLLSDY----LDIKLLIAGDGPLR------ATLERLIKALGLSNRVKLLG 251 (360)
T ss_pred cCcCCCCEEEEEEeeCchhcCcHHHHHHHHHHHhhC----CCeEEEEEcCCCcH------HHHHHHHHhcCCCCcEEEec
Confidence 11345689999999999999999999999998766 68999999998753 67788888888888999999
Q ss_pred CCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeec--CCHHHHHHHHHHH
Q 012436 343 NLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLA--QNAEEYADAIVKI 420 (464)
Q Consensus 343 ~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~--~~~~~la~~i~~l 420 (464)
+. +++.++|+.||++++||..|++|++++|||++|+|||+++.++. .+++.+ +|+.+ +|+++++++|.++
T Consensus 252 ~~--~~~~~~~~~ad~~v~~s~~e~~~~~~~Ea~a~G~PvI~~~~~~~-~e~i~~-----~g~~~~~~~~~~~~~~i~~l 323 (360)
T cd04951 252 LR--DDIAAYYNAADLFVLSSAWEGFGLVVAEAMACELPVVATDAGGV-REVVGD-----SGLIVPISDPEALANKIDEI 323 (360)
T ss_pred cc--ccHHHHHHhhceEEecccccCCChHHHHHHHcCCCEEEecCCCh-hhEecC-----CceEeCCCCHHHHHHHHHHH
Confidence 87 78999999999999999999999999999999999999999888 678755 45444 4999999999999
Q ss_pred HcCCHHHHHHHHHHHHHHH-HccCHHHHHHHHHHHHH
Q 012436 421 ISMPETERLEMAAAARRRA-ARFSEQRFYEDFKAAIR 456 (464)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~ 456 (464)
++.+++.++.++++ ++.+ ++|||+.+++++.++|+
T Consensus 324 l~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~y~ 359 (360)
T cd04951 324 LKMSGEERDIIGAR-RERIVKKFSINSIVQQWLTLYT 359 (360)
T ss_pred HhCCHHHHHHHHHH-HHHHHHhcCHHHHHHHHHHHhh
Confidence 95266666666666 6666 99999999999999986
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-36 Score=299.45 Aligned_cols=391 Identities=17% Similarity=0.110 Sum_probs=257.1
Q ss_pred eEEEecCCCCC---CCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhh--c---------Cc----ccC
Q 012436 36 SVAFFHPNTND---GGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDR--F---------GV----ELL 97 (464)
Q Consensus 36 kI~~~~~~~~~---~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~--~---------~~----~~~ 97 (464)
||+++++-..+ .||.+.++..|+++|++.| ++|.++++.++............. + .+ ...
T Consensus 1 ~Il~v~~E~~p~~k~GGl~~~~~~L~~aL~~~G--~~V~Vi~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (476)
T cd03791 1 KVLFVASEVAPFAKTGGLGDVVGALPKALAKLG--HDVRVIMPKYGRILDELRGQLLVLRLFGVPVGGRPEYVGVFELPV 78 (476)
T ss_pred CEEEEEccccccccCCcHHHHHHHHHHHHHHCC--CeEEEEecCCcchhhHhccCeEEEEEEeeccCCceeEEEEEEEEe
Confidence 68888876444 3999999999999999999 555666655422111110000000 0 00 001
Q ss_pred CCceeeeeeccccccccc------CcceehhhhchhhhHHHHHHhhh--cCCcEEEecccccccch-hh-hc------cC
Q 012436 98 HPPKVVHLYRRKWIEEST------YPRFTMIGQSFGSVYLSWEALCK--FTPLYYFDTSGYAFTYP-LA-RI------FG 161 (464)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~--~~~Dvv~~~~~~~~~~~-~~-~~------~~ 161 (464)
.+++++.+....+..... +.......++......+.+.+++ .+||+||++..+....+ +. +. .+
T Consensus 79 ~gv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~l~~~~~~pDviH~hd~~t~~~~~~l~~~~~~~~~~~ 158 (476)
T cd03791 79 DGVPVYFLDNPDYFDRPGLYDDSGYDYEDNAERFALFSRAALELLRRLGWKPDIIHCHDWHTGLVPALLKEKYADPFFKN 158 (476)
T ss_pred CCceEEEEcChHHcCCCCCCCccCCCCccHHHHHHHHHHHHHHHHHhcCCCCcEEEECchHHHHHHHHHHHhhccccCCC
Confidence 223444443322221111 11111111112222333444554 79999998877665544 22 23 48
Q ss_pred ceEEEEeeCCcchhhhhhcccccccccCCCcccccchh--hhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHH-
Q 012436 162 CRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNW--LSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEK- 238 (464)
Q Consensus 162 ~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~- 238 (464)
+|+|+++|+.............. .. ..+ ..............+++..++.+|.++++|+..++.+.+
T Consensus 159 ~~~v~tiH~~~~~g~~~~~~~~~----~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~ 228 (476)
T cd03791 159 IKTVFTIHNLAYQGVFPLEALED----LG------LPWEELFHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYAREILTP 228 (476)
T ss_pred CCEEEEeCCCCCCCCCCHHHHHH----cC------CCccchhhhcccccCCcccHHHHHHHhcCcCeecCHhHHHHhCCC
Confidence 99999999543111000000000 00 000 000000000001135677789999999999999988863
Q ss_pred --------HhC-CCCCeEEecCCCCCCCCccCCCCC----------------------------CCCCcEEEEEeccCCC
Q 012436 239 --------LWG-IPDRIKRVYPPCDTSGLQVLPLER----------------------------STEYPAIISVAQFRPE 281 (464)
Q Consensus 239 --------~~~-~~~~i~~i~~~~d~~~~~~~~~~~----------------------------~~~~~~i~~~G~~~~~ 281 (464)
.+. ...++.+|+||+|.+.+.+..... .++.++++|+||+.+.
T Consensus 229 ~~~~gl~~~~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~ 308 (476)
T cd03791 229 EFGEGLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQ 308 (476)
T ss_pred CCCcchHHHHHhccCCeEEEeCCCcCcccCccccchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEEEEEeecccc
Confidence 111 257999999999998876432211 2567899999999999
Q ss_pred CChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHHHhcCcEEEE
Q 012436 282 KAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIH 361 (464)
Q Consensus 282 K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ 361 (464)
||++.+++++..+.+. +++|+++|+|+. .+.+.++++++++ .+++.+.+..+.+++..+|+.||++++
T Consensus 309 Kg~~~li~a~~~l~~~------~~~lvi~G~g~~----~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~aDv~l~ 376 (476)
T cd03791 309 KGIDLLLEALPELLEL------GGQLVILGSGDP----EYEEALRELAARY--PGRVAVLIGYDEALAHLIYAGADFFLM 376 (476)
T ss_pred ccHHHHHHHHHHHHHc------CcEEEEEecCCH----HHHHHHHHHHHhC--CCcEEEEEeCCHHHHHHHHHhCCEEEC
Confidence 9999999999998764 689999999842 3446677777665 468888777778888999999999999
Q ss_pred cCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCcc------ceeecC--CHHHHHHHHHHHHc--CCHHHHHHH
Q 012436 362 SMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQ------TGFLAQ--NAEEYADAIVKIIS--MPETERLEM 431 (464)
Q Consensus 362 ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~------~g~~~~--~~~~la~~i~~l~~--~~~~~~~~~ 431 (464)
||..|++|++++|||+||+|||+++.+|. .|++.+ +. +|++++ |+++++++|.++++ .+++.+.++
T Consensus 377 pS~~E~~gl~~lEAma~G~pvI~~~~gg~-~e~v~~---~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~ 452 (476)
T cd03791 377 PSRFEPCGLTQMYAMRYGTVPIVRATGGL-ADTVID---YNEDTGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKL 452 (476)
T ss_pred CCCCCCCcHHHHHHhhCCCCCEECcCCCc-cceEeC---CcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 99999999999999999999999999998 688877 66 899986 89999999998874 155666666
Q ss_pred HHHHHHHHHccCHHHHHHHHHHHHH
Q 012436 432 AAAARRRAARFSEQRFYEDFKAAIR 456 (464)
Q Consensus 432 ~~~~~~~~~~~s~~~~~~~~~~~~~ 456 (464)
++++.+ +.|||+.+++++.++|+
T Consensus 453 ~~~~~~--~~fsw~~~a~~~~~~y~ 475 (476)
T cd03791 453 QRNAMA--QDFSWDRSAKEYLELYR 475 (476)
T ss_pred HHHHhc--cCCChHHHHHHHHHHHh
Confidence 665543 67999999999999986
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-37 Score=271.03 Aligned_cols=362 Identities=15% Similarity=0.151 Sum_probs=274.4
Q ss_pred ceEEEecCCCCCC-CCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCC-ceeeeeecccccc
Q 012436 35 TSVAFFHPNTNDG-GGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHP-PKVVHLYRRKWIE 112 (464)
Q Consensus 35 mkI~~~~~~~~~~-GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 112 (464)
++|+.+.+.+-+. ||.|.+.+++++.|.+.| +.|++.|..++ ++.|++...+ .++++++......
T Consensus 1 ~~i~mVsdff~P~~ggveshiy~lSq~li~lg--hkVvvithayg-----------~r~girylt~glkVyylp~~v~~n 67 (426)
T KOG1111|consen 1 SRILMVSDFFYPSTGGVESHIYALSQCLIRLG--HKVVVITHAYG-----------NRVGIRYLTNGLKVYYLPAVVGYN 67 (426)
T ss_pred CcceeeCcccccCCCChhhhHHHhhcchhhcC--CeEEEEecccc-----------CccceeeecCCceEEEEeeeeeec
Confidence 4678887766544 899999999999999999 77777776542 1225544444 4788887765554
Q ss_pred cccCcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccch----hhhccCceEEEEeeCCcchhhhhhccccccccc
Q 012436 113 ESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP----LARIFGCRVICYTHYPTISLDMISRVREGSSMY 188 (464)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~----~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~ 188 (464)
...+|.+ +.....+...+.+.+..++|.++.++.... .++..|.+.|++-|.-.-..|.
T Consensus 68 ~tT~ptv------~~~~Pllr~i~lrE~I~ivhghs~fS~lahe~l~hartMGlktVfTdHSlfGfad~----------- 130 (426)
T KOG1111|consen 68 QTTFPTV------FSDFPLLRPILLRERIEIVHGHSPFSYLAHEALMHARTMGLKTVFTDHSLFGFADI----------- 130 (426)
T ss_pred ccchhhh------hccCcccchhhhhhceEEEecCChHHHHHHHHHHHHHhcCceEEEeccccccccch-----------
Confidence 4444443 222333334455568999998888766543 5667899999999931100000
Q ss_pred CCCcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCC-CCCeEEecCCCCCCCCccCCCCCC-
Q 012436 189 NNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLERS- 266 (464)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~-~~~i~~i~~~~d~~~~~~~~~~~~- 266 (464)
- .......-...+...|++||+|...++...-+... ++++.+|||.++.+.|.+.+....
T Consensus 131 --------------~----si~~n~ll~~sL~~id~~IcVshtskentvlr~~L~p~kvsvIPnAv~~~~f~P~~~~~~S 192 (426)
T KOG1111|consen 131 --------------G----SILTNKLLPLSLANIDRIICVSHTSKENTVLRGALAPAKVSVIPNAVVTHTFTPDAADKPS 192 (426)
T ss_pred --------------h----hhhhcceeeeeecCCCcEEEEeecCCCceEEEeccCHhHeeeccceeeccccccCccccCC
Confidence 0 11111233556788999999999988766444333 789999999999999987444443
Q ss_pred CCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCh
Q 012436 267 TEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLY 346 (464)
Q Consensus 267 ~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~ 346 (464)
.+..+++.+||+-.+||+|.+++++.++.++. |+++++|+|+||.+ ..+++..+++.+.++|.++|.+++
T Consensus 193 ~~i~~ivv~sRLvyrKGiDll~~iIp~vc~~~----p~vrfii~GDGPk~------i~lee~lEk~~l~~rV~~lG~v~h 262 (426)
T KOG1111|consen 193 ADIITIVVASRLVYRKGIDLLLEIIPSVCDKH----PEVRFIIIGDGPKR------IDLEEMLEKLFLQDRVVMLGTVPH 262 (426)
T ss_pred CCeeEEEEEeeeeeccchHHHHHHHHHHHhcC----CCeeEEEecCCccc------chHHHHHHHhhccCceEEecccch
Confidence 44489999999999999999999999999987 79999999999865 567888888888999999999999
Q ss_pred hHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC-CHHHHHHHHHHHHcCCH
Q 012436 347 RDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ-NAEEYADAIVKIISMPE 425 (464)
Q Consensus 347 ~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~-~~~~la~~i~~l~~~~~ 425 (464)
+++.+.|.+-|+|++||..|.|+++++||++||+|||+++.||. +|++.+ +.-++.+ +++++++++.++++ .
T Consensus 263 ~~Vr~vl~~G~IFlntSlTEafc~~ivEAaScGL~VVsTrVGGI-peVLP~----d~i~~~~~~~~dl~~~v~~ai~-~- 335 (426)
T KOG1111|consen 263 DRVRDVLVRGDIFLNTSLTEAFCMVIVEAASCGLPVVSTRVGGI-PEVLPE----DMITLGEPGPDDLVGAVEKAIT-K- 335 (426)
T ss_pred HHHHHHHhcCcEEeccHHHHHHHHHHHHHHhCCCEEEEeecCCc-cccCCc----cceeccCCChHHHHHHHHHHHH-H-
Confidence 99999999999999999999999999999999999999999999 688766 3333444 89999999988886 2
Q ss_pred HHHHHHHHHHHHHH-HccCHHHHHHHHHHHHHHHHhhcC
Q 012436 426 TERLEMAAAARRRA-ARFSEQRFYEDFKAAIRPILCHAA 463 (464)
Q Consensus 426 ~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~ 463 (464)
+...-+...+.+ +.|+|+.++++-.+.|.++...+.
T Consensus 336 --~~~~p~~~h~~v~~~y~w~dVa~rTekvy~r~~~t~~ 372 (426)
T KOG1111|consen 336 --LRTLPLEFHDRVKKMYSWKDVAERTEKVYDRAATTSI 372 (426)
T ss_pred --hccCchhHHHHHHHhccHHHHHHHHHHHHHHHhhccC
Confidence 122223445556 789999999999999999876653
|
|
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-36 Score=296.24 Aligned_cols=291 Identities=17% Similarity=0.180 Sum_probs=233.1
Q ss_pred cCCcEEEecccccc-cch--hhhccCceEEEEeeCCcchh---hhhhcccccccccCCCcccccchhhhHHHHHHHHHHH
Q 012436 139 FTPLYYFDTSGYAF-TYP--LARIFGCRVICYTHYPTISL---DMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFS 212 (464)
Q Consensus 139 ~~~Dvv~~~~~~~~-~~~--~~~~~~~p~v~~~h~p~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (464)
.++|++|.++.... ... +++..++|+|++.|+-.... ++... .......+..+.+.+.
T Consensus 172 ~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~----------------~~~~~~~~~~~~~~~~ 235 (475)
T cd03813 172 PKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQA----------------DWEMSYFRRLWIRFFE 235 (475)
T ss_pred CCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhc----------------ccchHHHHHHHHHHHH
Confidence 37899998764322 222 45578999999999421100 00000 0011223344455667
Q ss_pred HHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCCC-CCCCCCcEEEEEeccCCCCChHHHHHHH
Q 012436 213 WMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL-ERSTEYPAIISVAQFRPEKAHPLQLEAF 291 (464)
Q Consensus 213 ~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~~-~~~~~~~~i~~~G~~~~~K~~~~ll~a~ 291 (464)
.+++.+++.||.|+++|+..++...+.+..++++.+||||+|.+.+.+... ....+.++|+|+||+.+.||++.+++|+
T Consensus 236 ~l~~~~~~~ad~Ii~~s~~~~~~~~~~g~~~~ki~vIpNgid~~~f~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~ 315 (475)
T cd03813 236 SLGRLAYQAADRITTLYEGNRERQIEDGADPEKIRVIPNGIDPERFAPARRARPEKEPPVVGLIGRVVPIKDIKTFIRAA 315 (475)
T ss_pred HHHHHHHHhCCEEEecCHHHHHHHHHcCCCHHHeEEeCCCcCHHHcCCccccccCCCCcEEEEEeccccccCHHHHHHHH
Confidence 788889999999999999999887665333678999999999987764432 1235668999999999999999999999
Q ss_pred HHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChH
Q 012436 292 SVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGIS 371 (464)
Q Consensus 292 ~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~ 371 (464)
+.+.+.. |+++++|+|++++ +..+.++++++++++++.++|.|+| .+++.++|+.+|++++||..|++|++
T Consensus 316 ~~l~~~~----p~~~l~IvG~g~~--~~~~~~e~~~li~~l~l~~~V~f~G---~~~v~~~l~~aDv~vlpS~~Eg~p~~ 386 (475)
T cd03813 316 AIVRKKI----PDAEGWVIGPTDE--DPEYAEECRELVESLGLEDNVKFTG---FQNVKEYLPKLDVLVLTSISEGQPLV 386 (475)
T ss_pred HHHHHhC----CCeEEEEECCCCc--ChHHHHHHHHHHHHhCCCCeEEEcC---CccHHHHHHhCCEEEeCchhhcCChH
Confidence 9998876 6999999998863 3467789999999999999999999 37899999999999999999999999
Q ss_pred HHHHHHhCCcEEEeCCCCCccceecccCC---ccceeecC--CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-HccCHH
Q 012436 372 VVEYMAAGAIPIAHNSAGPKMDIVLEEDG---QQTGFLAQ--NAEEYADAIVKIISMPETERLEMAAAARRRA-ARFSEQ 445 (464)
Q Consensus 372 ~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~---~~~g~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~-~~~s~~ 445 (464)
++|||+||+|||+|+.++. .+++.+... |.+|++++ |+++++++|.++++ |++.++++++++++.+ +.|+|+
T Consensus 387 vlEAma~G~PVVatd~g~~-~elv~~~~~~~~g~~G~lv~~~d~~~la~ai~~ll~-~~~~~~~~~~~a~~~v~~~~s~~ 464 (475)
T cd03813 387 ILEAMAAGIPVVATDVGSC-RELIEGADDEALGPAGEVVPPADPEALARAILRLLK-DPELRRAMGEAGRKRVERYYTLE 464 (475)
T ss_pred HHHHHHcCCCEEECCCCCh-HHHhcCCcccccCCceEEECCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHhCCHH
Confidence 9999999999999999998 677765110 24888876 99999999999999 9999999999999999 889999
Q ss_pred HHHHHHHHHHH
Q 012436 446 RFYEDFKAAIR 456 (464)
Q Consensus 446 ~~~~~~~~~~~ 456 (464)
.+++++.++|+
T Consensus 465 ~~~~~y~~lY~ 475 (475)
T cd03813 465 RMIDSYRRLYL 475 (475)
T ss_pred HHHHHHHHHhC
Confidence 99999999874
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-35 Score=282.15 Aligned_cols=349 Identities=23% Similarity=0.237 Sum_probs=259.6
Q ss_pred eEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeeccccccccc
Q 012436 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (464)
Q Consensus 36 kI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (464)
||+++.+.+.. ||+++++..++++|.+.|++++++..... ....+.... .++ ++..+.....
T Consensus 1 ~i~~i~~~~~~-gG~~~~~~~l~~~l~~~~~~v~~~~~~~~-----~~~~~~~~~-~~i------~v~~~~~~~~----- 62 (365)
T cd03807 1 KVLHVITGLDV-GGAERMLVRLLKGLDRDRFEHVVISLTDR-----GELGEELEE-AGV------PVYCLGKRPG----- 62 (365)
T ss_pred CeEEEEeeccC-ccHHHHHHHHHHHhhhccceEEEEecCcc-----hhhhHHHHh-cCC------eEEEEecccc-----
Confidence 68999888877 59999999999999999966665554322 112121111 222 3333332211
Q ss_pred CcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccch--hhhc-cCceEEEEeeCCcchhhhhhcccccccccCCCc
Q 012436 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LARI-FGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (464)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~--~~~~-~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~ 192 (464)
.........+.+.+++.+||+||++........ ..+. .+.|++++.|.....
T Consensus 63 -------~~~~~~~~~~~~~~~~~~~div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------------------ 117 (365)
T cd03807 63 -------RPDPGALLRLYKLIRRLRPDVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLD------------------ 117 (365)
T ss_pred -------cccHHHHHHHHHHHHhhCCCEEEeccccccHHHHHHHHhcCCCcEEEEecCCccc------------------
Confidence 011233455667788899999997655443332 2333 688999998832210
Q ss_pred ccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCCCC--------
Q 012436 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLE-------- 264 (464)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~~~-------- 264 (464)
.. ........++.+...+.+|.++++|+..++.+.+......++.+++||+|...+......
T Consensus 118 ------~~----~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~ 187 (365)
T cd03807 118 ------LG----KKSTRLVARLRRLLSSFIPLIVANSAAAAEYHQAIGYPPKKIVVIPNGVDTERFSPDLDARARLREEL 187 (365)
T ss_pred ------cc----chhHhHHHHHHHHhccccCeEEeccHHHHHHHHHcCCChhheeEeCCCcCHHhcCCcccchHHHHHhc
Confidence 00 011122334556667889999999999999998863236788999999998765532211
Q ss_pred -CCCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHH-hcCCCCcEEEcc
Q 012436 265 -RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSI-ELKVDGNVEFYK 342 (464)
Q Consensus 265 -~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~-~~~l~~~v~~~g 342 (464)
.+++.+.++++|++.+.||++.+++++..+.++. ++++++++|.++.. +..+.... ++++.+++.+.|
T Consensus 188 ~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~----~~~~l~i~G~~~~~------~~~~~~~~~~~~~~~~v~~~g 257 (365)
T cd03807 188 GLPEDTFLIGIVARLHPQKDHATLLRAAALLLKKF----PNARLLLVGDGPDR------ANLELLALKELGLEDKVILLG 257 (365)
T ss_pred CCCCCCeEEEEecccchhcCHHHHHHHHHHHHHhC----CCeEEEEecCCcch------hHHHHHHHHhcCCCceEEEcc
Confidence 1245678999999999999999999999998775 68999999998654 33444444 778888999999
Q ss_pred CCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC--CHHHHHHHHHHH
Q 012436 343 NLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ--NAEEYADAIVKI 420 (464)
Q Consensus 343 ~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~--~~~~la~~i~~l 420 (464)
.. +++.++|+.||++++||..|++|++++|||+||+|||+++.++. .+++.+ +|++++ |+++++++|.++
T Consensus 258 ~~--~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~~~~-~e~~~~-----~g~~~~~~~~~~l~~~i~~l 329 (365)
T cd03807 258 ER--SDVPALLNALDVFVLSSLSEGFPNVLLEAMACGLPVVATDVGDN-AELVGD-----TGFLVPPGDPEALAEAIEAL 329 (365)
T ss_pred cc--ccHHHHHHhCCEEEeCCccccCCcHHHHHHhcCCCEEEcCCCCh-HHHhhc-----CCEEeCCCCHHHHHHHHHHH
Confidence 76 78999999999999999999999999999999999999999988 666643 666664 999999999999
Q ss_pred HcCCHHHHHHHHHHHHHHH-HccCHHHHHHHHHHHHH
Q 012436 421 ISMPETERLEMAAAARRRA-ARFSEQRFYEDFKAAIR 456 (464)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~ 456 (464)
++ +++.+.++++++++.+ ++|||+.+++++.++|+
T Consensus 330 ~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~ 365 (365)
T cd03807 330 LA-DPALRQALGEAARERIEENFSIEAMVEAYEELYR 365 (365)
T ss_pred Hh-ChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 99 9999999999999999 88999999999999874
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-35 Score=281.62 Aligned_cols=361 Identities=19% Similarity=0.200 Sum_probs=263.1
Q ss_pred EEEecCCCCC--CCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeecccccccc
Q 012436 37 VAFFHPNTND--GGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (464)
Q Consensus 37 I~~~~~~~~~--~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (464)
|+++++..+. .||+++++..++++|.+.|++++++...... ............... ... .....
T Consensus 1 iLii~~~~p~~~~~g~~~~~~~~~~~l~~~g~~v~v~~~~~~~--~~~~~~~~~~~~~~~------~~~-~~~~~----- 66 (377)
T cd03798 1 ILVISSLYPPPNNGGGGIFVKELARALAKRGVEVTVLAPGPWG--PKLLDLLKGRLVGVE------RLP-VLLPV----- 66 (377)
T ss_pred CeEeccCCCCCCCchHHHHHHHHHHHHHHCCCceEEEecCCCC--CCchhhccccccccc------ccc-cCcch-----
Confidence 5677777766 4899999999999999999555544433222 111100000000000 000 00000
Q ss_pred cCcceehhhhchhhhHHHHHHhh--hcCCcEEEecccccccch---hhhccCceEEEEeeCCcchhhhhhcccccccccC
Q 012436 115 TYPRFTMIGQSFGSVYLSWEALC--KFTPLYYFDTSGYAFTYP---LARIFGCRVICYTHYPTISLDMISRVREGSSMYN 189 (464)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~l~--~~~~Dvv~~~~~~~~~~~---~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~ 189 (464)
..................+.++ ..+||+|+.+........ +.+..++|++++.|......
T Consensus 67 -~~~~~~~~~~~~~~~~~~~~l~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~-------------- 131 (377)
T cd03798 67 -VPLLKGPLLYLLAARALLKLLKLKRFRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNL-------------- 131 (377)
T ss_pred -hhccccchhHHHHHHHHHHHHhcccCCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcc--------------
Confidence 0000001111222334455676 889999987654433322 44467789999999443100
Q ss_pred CCcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCCC------
Q 012436 190 NNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL------ 263 (464)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~~------ 263 (464)
... . ......++..++.+|.+++.|+..++.+.+.+....++.+++||+|.+.+.....
T Consensus 132 ---------~~~-~-----~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 196 (377)
T cd03798 132 ---------LPR-K-----RLLRALLRRALRRADAVIAVSEALADELKALGIDPEKVTVIPNGVDTERFSPADRAEARKL 196 (377)
T ss_pred ---------cCc-h-----hhHHHHHHHHHhcCCeEEeCCHHHHHHHHHhcCCCCceEEcCCCcCcccCCCcchHHHHhc
Confidence 000 0 0233455677799999999999999999987534789999999999887764332
Q ss_pred CCCCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccC
Q 012436 264 ERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKN 343 (464)
Q Consensus 264 ~~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~ 343 (464)
....+.+.++++|++.+.||++.++++++.+.+.. ++++++++|.++.. +.+++.++++++.++|.+.|+
T Consensus 197 ~~~~~~~~i~~~g~~~~~k~~~~li~~~~~~~~~~----~~~~l~i~g~~~~~------~~~~~~~~~~~~~~~v~~~g~ 266 (377)
T cd03798 197 GLPEDKKVILFVGRLVPRKGIDYLIEALARLLKKR----PDVHLVIVGDGPLR------EALEALAAELGLEDRVTFLGA 266 (377)
T ss_pred cCCCCceEEEEeccCccccCHHHHHHHHHHHHhcC----CCeEEEEEcCCcch------HHHHHHHHhcCCcceEEEeCC
Confidence 23346689999999999999999999999998764 58999999988643 567777888888889999999
Q ss_pred CChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC--CHHHHHHHHHHHH
Q 012436 344 LLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ--NAEEYADAIVKII 421 (464)
Q Consensus 344 ~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~--~~~~la~~i~~l~ 421 (464)
++++++.++|++||++++|+..|++|.+++|||++|+|||+++.++. .+++.+ +.+|++++ |+++++++|.+++
T Consensus 267 ~~~~~~~~~~~~ad~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~~-~~~~~~---~~~g~~~~~~~~~~l~~~i~~~~ 342 (377)
T cd03798 267 VPHEEVPAYYAAADVFVLPSLREGFGLVLLEAMACGLPVVATDVGGI-PEIITD---GENGLLVPPGDPEALAEAILRLL 342 (377)
T ss_pred CCHHHHHHHHHhcCeeecchhhccCChHHHHHHhcCCCEEEecCCCh-HHHhcC---CcceeEECCCCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999988 788888 78888775 9999999999999
Q ss_pred cCCHHHHHHHHHHHHHHH-HccCHHHHHHHHHHHHHHH
Q 012436 422 SMPETERLEMAAAARRRA-ARFSEQRFYEDFKAAIRPI 458 (464)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~ 458 (464)
+ +++. ++..++++.+ ++|+|+.+++++.++++++
T Consensus 343 ~-~~~~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~~l 377 (377)
T cd03798 343 A-DPWL--RLGRAARRRVAERFSWENVAERLLELYREV 377 (377)
T ss_pred c-CcHH--HHhHHHHHHHHHHhhHHHHHHHHHHHHhhC
Confidence 9 8876 6777788777 9999999999999998763
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-35 Score=279.29 Aligned_cols=348 Identities=18% Similarity=0.115 Sum_probs=246.8
Q ss_pred eEEEecCCCCCC--CCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeeccccccc
Q 012436 36 SVAFFHPNTNDG--GGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEE 113 (464)
Q Consensus 36 kI~~~~~~~~~~--GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (464)
||+++++++++. ||+++++.+++++|.+.|+++.++...... ........ .. .............
T Consensus 1 kIl~i~~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~--~~~~~~~~-----~~------~~~~~~~~~~~~~ 67 (359)
T cd03823 1 RILVVNHLYPPRSVGGAEVVAHDLAEALAKRGHEVAVLTAGEDP--PRQDKEVI-----GV------VVYGRPIDEVLRS 67 (359)
T ss_pred CeeEEcccCCcccccchHHHHHHHHHHHHhcCCceEEEeCCCCC--CCcccccc-----cc------eeeccccccccCC
Confidence 689998887765 899999999999999999555554433322 11110000 00 0000000000000
Q ss_pred c-cCccee-hhhhchhhhHHHHHHhhhcCCcEEEecccccccch---hhhccCceEEEEeeCCcchhhhhhccccccccc
Q 012436 114 S-TYPRFT-MIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP---LARIFGCRVICYTHYPTISLDMISRVREGSSMY 188 (464)
Q Consensus 114 ~-~~~~~~-~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~---~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~ 188 (464)
. ....+. .............+.+++.+||+||.+........ .++..++|++.++|....
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~hd~~~--------------- 132 (359)
T cd03823 68 ALPRDLFHLSDYDNPAVVAEFARLLEDFRPDVVHFHHLQGLGVSILRAARDRGIPIVLTLHDYWL--------------- 132 (359)
T ss_pred CchhhhhHHHhccCHHHHHHHHHHHHHcCCCEEEECCccchHHHHHHHHHhcCCCEEEEEeeeee---------------
Confidence 0 000000 00111223445566788899999997665333222 445678999999993210
Q ss_pred CCCcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCCCCCCCC
Q 012436 189 NNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTE 268 (464)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~~~~~~~ 268 (464)
.... ........|.++++|+..++.+.+.+....++.+++||+|...+.........+
T Consensus 133 -----------~~~~-----------~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~vi~n~~~~~~~~~~~~~~~~~ 190 (359)
T cd03823 133 -----------ICPR-----------QGLFKKGGDAVIAPSRFLLDRYVANGLFAEKISVIRNGIDLDRAKRPRRAPPGG 190 (359)
T ss_pred -----------ecch-----------hhhhccCCCEEEEeCHHHHHHHHHcCCCccceEEecCCcChhhccccccCCCCC
Confidence 0000 011113339999999999999988764457899999999988776433223456
Q ss_pred CcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhH
Q 012436 269 YPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRD 348 (464)
Q Consensus 269 ~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~ 348 (464)
+++++|+|++.+.||++.++++++.+.+ ++++|+++|.++... ...... +..++|.+.|+++.++
T Consensus 191 ~~~i~~~G~~~~~k~~~~li~~~~~l~~------~~~~l~i~G~~~~~~------~~~~~~---~~~~~v~~~g~~~~~~ 255 (359)
T cd03823 191 RLRFGFIGQLTPHKGVDLLLEAFKRLPR------GDIELVIVGNGLELE------EESYEL---EGDPRVEFLGAYPQEE 255 (359)
T ss_pred ceEEEEEecCccccCHHHHHHHHHHHHh------cCcEEEEEcCchhhh------HHHHhh---cCCCeEEEeCCCCHHH
Confidence 6899999999999999999999999876 289999999986431 111111 4467999999999999
Q ss_pred HHHHHhcCcEEEEcCC-CCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC--CHHHHHHHHHHHHcCCH
Q 012436 349 LVKLLGGAVVGIHSMI-DEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ--NAEEYADAIVKIISMPE 425 (464)
Q Consensus 349 ~~~~l~~ad~~v~ps~-~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~--~~~~la~~i~~l~~~~~ 425 (464)
+.++|++||++++||. .|++|++++|||++|+|||+++.++. .+++.+ +.+|++++ |++++++++.++++ |+
T Consensus 256 ~~~~~~~ad~~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~-~e~i~~---~~~g~~~~~~d~~~l~~~i~~l~~-~~ 330 (359)
T cd03823 256 IDDFYAEIDVLVVPSIWPENFPLVIREALAAGVPVIASDIGGM-AELVRD---GVNGLLFPPGDAEDLAAALERLID-DP 330 (359)
T ss_pred HHHHHHhCCEEEEcCcccCCCChHHHHHHHCCCCEEECCCCCH-HHHhcC---CCcEEEECCCCHHHHHHHHHHHHh-Ch
Confidence 9999999999999997 89999999999999999999999988 788887 77898886 79999999999999 99
Q ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q 012436 426 TERLEMAAAARRRAARFSEQRFYEDFKAAIR 456 (464)
Q Consensus 426 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 456 (464)
+.++++++++++..+. +.+++++.++|+
T Consensus 331 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 358 (359)
T cd03823 331 DLLERLRAGIEPPRSI---EDQAEEYLKLYR 358 (359)
T ss_pred HHHHHHHHhHHHhhhH---HHHHHHHHHHhh
Confidence 9999999998876632 888888888875
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=276.06 Aligned_cols=349 Identities=22% Similarity=0.195 Sum_probs=254.1
Q ss_pred eEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeeccccccccc
Q 012436 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (464)
Q Consensus 36 kI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (464)
||+++.+. .||.++++..++++|.+.|+++. +++....... .....++ .++.++.... .
T Consensus 1 kIl~i~~~---~~g~~~~~~~l~~~L~~~g~~v~--~~~~~~~~~~------~~~~~~~------~~~~~~~~~~----~ 59 (359)
T cd03808 1 KILHIVTV---DGGLYSFRLPLIKALRAAGYEVH--VVAPPGDELE------ELEALGV------KVIPIPLDRR----G 59 (359)
T ss_pred CeeEEEec---chhHHHHHHHHHHHHHhcCCeeE--EEecCCCccc------ccccCCc------eEEecccccc----c
Confidence 68888887 46999999999999999995554 4444321111 0001122 2222222110 0
Q ss_pred CcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccch--hhh-ccCceEEEEeeCCcchhhhhhcccccccccCCCc
Q 012436 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LAR-IFGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (464)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~--~~~-~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~ 192 (464)
.. ....+.......+.+++.+||+||.+...+..+. .++ ..+.+++...|....
T Consensus 60 ~~----~~~~~~~~~~~~~~~~~~~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------------------- 116 (359)
T cd03808 60 IN----PFKDLKALLRLYRLLRKERPDIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGF------------------- 116 (359)
T ss_pred cC----hHhHHHHHHHHHHHHHhcCCCEEEEccccchhHHHHHHHHcCCCCEEEEecCcch-------------------
Confidence 00 0111223445566788899999997765444333 233 345556666562210
Q ss_pred ccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCC--CCCeEEecCCCCCCCCccCCCCCCCCCc
Q 012436 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI--PDRIKRVYPPCDTSGLQVLPLERSTEYP 270 (464)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~--~~~i~~i~~~~d~~~~~~~~~~~~~~~~ 270 (464)
...........+..+++..++.+|.++++|+...+.+.+.+.. ..++.+.++++|.+.+...+.....+++
T Consensus 117 -------~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (359)
T cd03808 117 -------VFTSGGLKRRLYLLLERLALRFTDKVIFQNEDDRDLALKLGIIKKKKTVLIPGSGVDLDRFSPSPEPIPEDDP 189 (359)
T ss_pred -------hhccchhHHHHHHHHHHHHHhhccEEEEcCHHHHHHHHHhcCCCcCceEEecCCCCChhhcCccccccCCCCc
Confidence 0000011334455667888899999999999999999888654 3567777888888766533221245668
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHH-HHHhcCCCCcEEEccCCChhHH
Q 012436 271 AIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKD-KSIELKVDGNVEFYKNLLYRDL 349 (464)
Q Consensus 271 ~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~-~~~~~~l~~~v~~~g~~~~~~~ 349 (464)
.++|+|++.+.||++.++++++.+.+.. ++++|+++|.++..+. ... .+.+.+..++|.+.|+. +++
T Consensus 190 ~i~~~G~~~~~k~~~~li~~~~~l~~~~----~~~~l~i~G~~~~~~~------~~~~~~~~~~~~~~v~~~g~~--~~~ 257 (359)
T cd03808 190 VFLFVARLLKDKGIDELLEAARILKAKG----PNVRLLLVGDGDEENP------AAILEIEKLGLEGRVEFLGFR--DDV 257 (359)
T ss_pred EEEEEeccccccCHHHHHHHHHHHHhcC----CCeEEEEEcCCCcchh------hHHHHHHhcCCcceEEEeecc--ccH
Confidence 9999999999999999999999987755 5899999999875421 111 35566667899999995 899
Q ss_pred HHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC--CHHHHHHHHHHHHcCCHHH
Q 012436 350 VKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ--NAEEYADAIVKIISMPETE 427 (464)
Q Consensus 350 ~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~--~~~~la~~i~~l~~~~~~~ 427 (464)
.++|++||++++||..|++|++++|||++|+|||+++.++. .+++.+ +.+|++++ |+++++++|.+++. |++.
T Consensus 258 ~~~~~~adi~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~~-~~~i~~---~~~g~~~~~~~~~~~~~~i~~l~~-~~~~ 332 (359)
T cd03808 258 PELLAAADVFVLPSYREGLPRVLLEAMAMGRPVIATDVPGC-REAVID---GVNGFLVPPGDAEALADAIERLIE-DPEL 332 (359)
T ss_pred HHHHHhccEEEecCcccCcchHHHHHHHcCCCEEEecCCCc-hhhhhc---CcceEEECCCCHHHHHHHHHHHHh-CHHH
Confidence 99999999999999999999999999999999999999988 788887 78999886 89999999999999 9999
Q ss_pred HHHHHHHHHHHH-HccCHHHHHHHHH
Q 012436 428 RLEMAAAARRRA-ARFSEQRFYEDFK 452 (464)
Q Consensus 428 ~~~~~~~~~~~~-~~~s~~~~~~~~~ 452 (464)
++++++++++.+ ++|+|+.+++++.
T Consensus 333 ~~~~~~~~~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 333 RARMGQAARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 999999999997 9999999998875
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=277.74 Aligned_cols=344 Identities=16% Similarity=0.085 Sum_probs=243.6
Q ss_pred ceEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeecccccccc
Q 012436 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (464)
Q Consensus 35 mkI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (464)
|||++++.+... ||+++++..++++|.+.||++.+++....
T Consensus 1 MkIl~~~~~~~~-gG~~~~~~~l~~~l~~~G~~v~v~~~~~~-------------------------------------- 41 (365)
T cd03825 1 MKVLHLNTSDIS-GGAARAAYRLHRALQAAGVDSTMLVQEKK-------------------------------------- 41 (365)
T ss_pred CeEEEEecCCCC-CcHHHHHHHHHHHHHhcCCceeEEEeecc--------------------------------------
Confidence 899999876433 69999999999999999966555543321
Q ss_pred cCcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccch--hhhc--cCceEEEEeeCCcchhhhhhcccccccccCC
Q 012436 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LARI--FGCRVICYTHYPTISLDMISRVREGSSMYNN 190 (464)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~--~~~~--~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~ 190 (464)
...+.++..+||+||.+......+. .... .++|+|+++|........... ......|..
T Consensus 42 ----------------~~~~~~~~~~~diih~~~~~~~~~~~~~~~~~~~~~~~v~~~hd~~~~~~~~~~-~~~~~~~~~ 104 (365)
T cd03825 42 ----------------ALISKIEIINADIVHLHWIHGGFLSIEDLSKLLDRKPVVWTLHDMWPFTGGCHY-PGGCDRYKT 104 (365)
T ss_pred ----------------hhhhChhcccCCEEEEEccccCccCHHHHHHHHcCCCEEEEcccCcccccccCC-ccccccccc
Confidence 0112366779999997654333322 2222 399999999942210000000 000000000
Q ss_pred Cc---ccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCC-CCCeEEecCCCCCCCCccCCC---
Q 012436 191 NA---SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPL--- 263 (464)
Q Consensus 191 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~-~~~i~~i~~~~d~~~~~~~~~--- 263 (464)
.. ............ ...+.+........++.++++|++.++.+.+.++. ..++.++|||+|.+.+.+...
T Consensus 105 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~ 181 (365)
T cd03825 105 ECGNCPQLGSYPEKDLS---RWIWRRKRKAWADLNLTIVAPSRWLADCARSSSLFKGIPIEVIPNGIDTTIFRPRDKREA 181 (365)
T ss_pred cCCCCCCCCCCCcccHH---HHHHHHHHHHhccCCcEEEehhHHHHHHHHhccccCCCceEEeCCCCcccccCCCcHHHH
Confidence 00 000000000111 11111122222367789999999999999887634 578999999999887643211
Q ss_pred ----CCCCCCcEEEEEeccCC--CCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCc
Q 012436 264 ----ERSTEYPAIISVAQFRP--EKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGN 337 (464)
Q Consensus 264 ----~~~~~~~~i~~~G~~~~--~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~ 337 (464)
..+.+...+++.|+... .||++.+++++..+.++.. ++++++++|.++.. ... ++.++
T Consensus 182 ~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~---~~~~~~i~G~~~~~--------~~~-----~~~~~ 245 (365)
T cd03825 182 RKRLGLPADKKIILFGAVGGTDPRKGFDELIEALKRLAERWK---DDIELVVFGASDPE--------IPP-----DLPFP 245 (365)
T ss_pred HHHhCCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhccC---CCeEEEEeCCCchh--------hhc-----cCCCc
Confidence 11234456666666654 8999999999999877511 58999999988632 111 34568
Q ss_pred EEEccCCC-hhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC--CHHHHH
Q 012436 338 VEFYKNLL-YRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ--NAEEYA 414 (464)
Q Consensus 338 v~~~g~~~-~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~--~~~~la 414 (464)
+.++|+++ ++++.++|+.||++++||..|++|++++|||++|+|||+++.++. .+++.+ +.+|++++ |+++++
T Consensus 246 v~~~g~~~~~~~~~~~~~~ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~-~e~~~~---~~~g~~~~~~~~~~~~ 321 (365)
T cd03825 246 VHYLGSLNDDESLALIYSAADVFVVPSLQENFPNTAIEALACGTPVVAFDVGGI-PDIVDH---GVTGYLAKPGDPEDLA 321 (365)
T ss_pred eEecCCcCCHHHHHHHHHhCCEEEeccccccccHHHHHHHhcCCCEEEecCCCC-hhheeC---CCceEEeCCCCHHHHH
Confidence 99999998 889999999999999999999999999999999999999999988 688888 77998886 899999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHHH-HccCHHHHHHHHHHHHHHH
Q 012436 415 DAIVKIISMPETERLEMAAAARRRA-ARFSEQRFYEDFKAAIRPI 458 (464)
Q Consensus 415 ~~i~~l~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~ 458 (464)
+++.++++ |++.+.++++++++.+ ++|||+.+++++.++|+++
T Consensus 322 ~~l~~l~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~~~ 365 (365)
T cd03825 322 EGIEWLLA-DPDEREELGEAARELAENEFDSRVQAKRYLSLYEEL 365 (365)
T ss_pred HHHHHHHh-CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 99999999 9999999999999999 8999999999999999863
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-34 Score=271.90 Aligned_cols=361 Identities=13% Similarity=0.060 Sum_probs=235.7
Q ss_pred cccceEEEecCCCCCC-CCcchhhHHHHHHhhhhCCCCceEEEcccCCCCc--------------hhHHHHHHhhcCccc
Q 012436 32 NRTTSVAFFHPNTNDG-GGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFP--------------DSLLARAVDRFGVEL 96 (464)
Q Consensus 32 ~~~mkI~~~~~~~~~~-GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~--------------~~~~~~~~~~~~~~~ 96 (464)
.++|||++++..+.+. +|.......++.+|.++|| |+|.++.+...... .+......+..+.
T Consensus 2 ~~~mrIaivTdt~lP~vnGva~s~~~~a~~L~~~G~-heV~vvaP~~~~~~~~~~~~~~~~f~~~~~~e~~~~~~~~~-- 78 (462)
T PLN02846 2 QKKQHIAIFTTASLPWMTGTAVNPLFRAAYLAKDGD-REVTLVIPWLSLKDQKLVYPNKITFSSPSEQEAYVRQWLEE-- 78 (462)
T ss_pred CCCCEEEEEEcCCCCCCCCeeccHHHHHHHHHhcCC-cEEEEEecCCccccccccccccccccCchhhhhhhhhhccC--
Confidence 4579999998766665 8999999999999999993 34555554321000 0000001111111
Q ss_pred CCCceeeeeecccccccccCcc-eehhhhchhhhHHHHHHhhhcCCcEEEecccccccch-----hhhccCceEEEEeeC
Q 012436 97 LHPPKVVHLYRRKWIEESTYPR-FTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-----LARIFGCRVICYTHY 170 (464)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~-----~~~~~~~p~v~~~h~ 170 (464)
.+.+++...+ ..+|. +..-...+.......+.+++++||+||.++....... .++..+ ++|.+.|.
T Consensus 79 ----~v~r~~s~~~---p~yp~r~~~~~r~~~~~~~i~~~l~~~~pDVIHv~tP~~LG~~~~g~~~~~k~~-~vV~tyHT 150 (462)
T PLN02846 79 ----RISFLPKFSI---KFYPGKFSTDKRSILPVGDISETIPDEEADIAVLEEPEHLTWYHHGKRWKTKFR-LVIGIVHT 150 (462)
T ss_pred ----eEEEeccccc---ccCcccccccccccCChHHHHHHHHhcCCCEEEEcCchhhhhHHHHHHHHhcCC-cEEEEECC
Confidence 2222222111 11222 1110111223456677789999999997666554431 222334 47778884
Q ss_pred CcchhhhhhcccccccccCCCcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEec
Q 012436 171 PTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVY 250 (464)
Q Consensus 171 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~ 250 (464)
.. ..+.. .|. .........+...+..++ .++|.++++|....+ +.+ .+.+..
T Consensus 151 ~y-----~~Y~~----~~~----------~g~~~~~l~~~~~~~~~r--~~~d~vi~pS~~~~~-l~~------~~i~~v 202 (462)
T PLN02846 151 NY-----LEYVK----REK----------NGRVKAFLLKYINSWVVD--IYCHKVIRLSAATQD-YPR------SIICNV 202 (462)
T ss_pred Ch-----HHHHH----Hhc----------cchHHHHHHHHHHHHHHH--HhcCEEEccCHHHHH-Hhh------CEEecC
Confidence 21 11111 000 001111112212111122 248999999986655 322 233445
Q ss_pred CCCCCCCCccCCCC-----CCCC--CcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHH
Q 012436 251 PPCDTSGLQVLPLE-----RSTE--YPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQ 323 (464)
Q Consensus 251 ~~~d~~~~~~~~~~-----~~~~--~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~ 323 (464)
+|+|.+.|.+.... ...+ .+.++|+||+.+.||++.+++|++.+.+.. |+++|+|+|+|+++ +
T Consensus 203 ~GVd~~~f~~~~~~~~~~~~~~~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~~~~----~~~~l~ivGdGp~~------~ 272 (462)
T PLN02846 203 HGVNPKFLEIGKLKLEQQKNGEQAFTKGAYYIGKMVWSKGYKELLKLLHKHQKEL----SGLEVDLYGSGEDS------D 272 (462)
T ss_pred ceechhhcCCCcccHhhhcCCCCCcceEEEEEecCcccCCHHHHHHHHHHHHhhC----CCeEEEEECCCccH------H
Confidence 89998876532111 1122 236899999999999999999999988765 58999999999875 7
Q ss_pred HHHHHHHhcCCCCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccc
Q 012436 324 SLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQT 403 (464)
Q Consensus 324 ~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~ 403 (464)
++++.++++++..++ |.|..+. .++|+.+|+||+||..|++|++++||||||+|||+++.++ .+++.+ +.+
T Consensus 273 ~L~~~a~~l~l~~~v-f~G~~~~---~~~~~~~DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~--~~~v~~---~~n 343 (462)
T PLN02846 273 EVKAAAEKLELDVRV-YPGRDHA---DPLFHDYKVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS--NEFFKQ---FPN 343 (462)
T ss_pred HHHHHHHhcCCcEEE-ECCCCCH---HHHHHhCCEEEECCCcccchHHHHHHHHcCCcEEEecCCC--cceeec---CCc
Confidence 899999999886444 7886533 3689999999999999999999999999999999999886 388888 899
Q ss_pred eeecCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q 012436 404 GFLAQNAEEYADAIVKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIR 456 (464)
Q Consensus 404 g~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 456 (464)
|+.++|.+++++++.++++ ++. ..+...++ ++|||+..++++.+.++
T Consensus 344 g~~~~~~~~~a~ai~~~l~-~~~--~~~~~~a~---~~~SWe~~~~~l~~~~~ 390 (462)
T PLN02846 344 CRTYDDGKGFVRATLKALA-EEP--APLTDAQR---HELSWEAATERFLRVAD 390 (462)
T ss_pred eEecCCHHHHHHHHHHHHc-cCc--hhHHHHHH---HhCCHHHHHHHHHHHhc
Confidence 9999999999999999997 543 22222222 68999999999999885
|
|
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=281.43 Aligned_cols=371 Identities=19% Similarity=0.195 Sum_probs=257.0
Q ss_pred eEEEecCCCCCC-CCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeecccccccc
Q 012436 36 SVAFFHPNTNDG-GGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (464)
Q Consensus 36 kI~~~~~~~~~~-GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (464)
||+++.+..++. ||.++++..++++|.+.|+++++++..... ........ .......+..++..+........
T Consensus 1 kIl~i~~~~~~~~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~--~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 74 (394)
T cd03794 1 KILILSQYFPPELGGGAFRTTELAEELVKRGHEVTVITGSPNY--PSGKIYKG----YKREEVDGVRVHRVPLPPYKKNG 74 (394)
T ss_pred CEEEEecccCCccCCcceeHHHHHHHHHhCCceEEEEecCCCc--cccccccc----ceEEecCCeEEEEEecCCCCccc
Confidence 688888776553 799999999999999999555544433221 11110000 00011122233333322111100
Q ss_pred cCcceehhhhchhhhHHHHHHh--hhcCCcEEEecccccc-cch---hhhccCceEEEEeeCCcchhhhhhccccccccc
Q 012436 115 TYPRFTMIGQSFGSVYLSWEAL--CKFTPLYYFDTSGYAF-TYP---LARIFGCRVICYTHYPTISLDMISRVREGSSMY 188 (464)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~l--~~~~~Dvv~~~~~~~~-~~~---~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~ 188 (464)
.+................+ +..+||+||.+..... ..+ +++..++|+++++|........ .
T Consensus 75 ---~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~--~-------- 141 (394)
T cd03794 75 ---LLKRLLNYLSFALSALLALLKRRRRPDVIIATSPPLLIALAALLLARLKGAPFVLEVRDLWPESAV--A-------- 141 (394)
T ss_pred ---hHHHHHhhhHHHHHHHHHHHhcccCCCEEEEcCChHHHHHHHHHHHHhcCCCEEEEehhhcchhHH--H--------
Confidence 0011111122222233333 3778999997762222 212 3445689999999932110000 0
Q ss_pred CCCcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCCC-----
Q 012436 189 NNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL----- 263 (464)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~~----- 263 (464)
...........+...++++..++.+|.++++|+..++.+........++.++|||++...+.....
T Consensus 142 ---------~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 212 (394)
T cd03794 142 ---------LGLLKNGSLLYRLLRKLERLIYRRADAIVVISPGMREYLVRRGVPPEKISVIPNGVDLELFKPPPADESLR 212 (394)
T ss_pred ---------ccCccccchHHHHHHHHHHHHHhcCCEEEEECHHHHHHHHhcCCCcCceEEcCCCCCHHHcCCccchhhhh
Confidence 000001111124455677888899999999999999999843333678999999998776653321
Q ss_pred --CCCCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEc
Q 012436 264 --ERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFY 341 (464)
Q Consensus 264 --~~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~ 341 (464)
....+...++++|++...||++.+++++..+.+. ++++++++|.++.. +.+++.+...++ ++|.++
T Consensus 213 ~~~~~~~~~~i~~~G~~~~~k~~~~l~~~~~~l~~~-----~~~~l~i~G~~~~~------~~~~~~~~~~~~-~~v~~~ 280 (394)
T cd03794 213 KELGLDDKFVVLYAGNIGRAQGLDTLLEAAALLKDR-----PDIRFLIVGDGPEK------EELKELAKALGL-DNVTFL 280 (394)
T ss_pred hccCCCCcEEEEEecCcccccCHHHHHHHHHHHhhc-----CCeEEEEeCCcccH------HHHHHHHHHcCC-CcEEEe
Confidence 1335668999999999999999999999998765 38999999988643 456665555554 589999
Q ss_pred cCCChhHHHHHHhcCcEEEEcCCCCCC-----ChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC--CHHHHH
Q 012436 342 KNLLYRDLVKLLGGAVVGIHSMIDEHF-----GISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ--NAEEYA 414 (464)
Q Consensus 342 g~~~~~~~~~~l~~ad~~v~ps~~e~~-----~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~--~~~~la 414 (464)
|+++++++.++|+.||++++|+..|++ |++++|||++|+|||+++.++. .+++.+ +.+|++++ |+++++
T Consensus 281 g~~~~~~~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~-~~~~~~---~~~g~~~~~~~~~~l~ 356 (394)
T cd03794 281 GRVPKEELPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGES-AELVEE---AGAGLVVPPGDPEALA 356 (394)
T ss_pred CCCChHHHHHHHHhhCeeEEeccCcccccccCchHHHHHHHCCCcEEEecCCCc-hhhhcc---CCcceEeCCCCHHHHH
Confidence 999999999999999999999987765 7889999999999999999988 677777 68898886 899999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHHH-HccCHHHHHHHH
Q 012436 415 DAIVKIISMPETERLEMAAAARRRA-ARFSEQRFYEDF 451 (464)
Q Consensus 415 ~~i~~l~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~ 451 (464)
++|.++++ |++.++++++++++.+ ++|||+.+++++
T Consensus 357 ~~i~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 393 (394)
T cd03794 357 AAILELLD-DPEERAEMGENGRRYVEEKFSREKLAERL 393 (394)
T ss_pred HHHHHHHh-ChHHHHHHHHHHHHHHHHhhcHHHHHHhc
Confidence 99999999 9999999999999999 799999999876
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=275.13 Aligned_cols=338 Identities=24% Similarity=0.306 Sum_probs=249.0
Q ss_pred eEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeeccccccccc
Q 012436 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (464)
Q Consensus 36 kI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (464)
||+++++... +||+++++..++++|.+.|+++.+++...... ....... ... ........
T Consensus 1 kIl~~~~~~~-~gG~~~~~~~l~~~l~~~g~~v~v~~~~~~~~--~~~~~~~-----~~~---~~~~~~~~--------- 60 (353)
T cd03811 1 KILFVIPSLG-GGGAERVLLNLANGLDKRGYDVTLVVLRDEGD--YLELLPS-----NVK---LIPVRVLK--------- 60 (353)
T ss_pred CeEEEeeccc-CCCcchhHHHHHHHHHhcCceEEEEEcCCCCc--ccccccc-----chh---hhceeeee---------
Confidence 6899988877 56999999999999999996666555443321 1000000 000 00000000
Q ss_pred CcceehhhhchhhhHHHHHHhhhcCCcEEEeccc-ccccch-hhhccCceEEEEeeCCcchhhhhhcccccccccCCCcc
Q 012436 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSG-YAFTYP-LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNAS 193 (464)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~-~~~~~~-~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~ 193 (464)
..............+.+++.+||+|+.+.. ...... +....++|+++++|......
T Consensus 61 ----~~~~~~~~~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------------------ 118 (353)
T cd03811 61 ----LKSLRDLLAILRLRRLLRKEKPDVVISHLTTTPNVLALLAARLGTKLIVWEHNSLSLE------------------ 118 (353)
T ss_pred ----cccccchhHHHHHHHHHHhcCCCEEEEcCccchhHHHHHHhhcCCceEEEEcCcchhh------------------
Confidence 000111223445566688889999997776 332222 23233789999999433100
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCC-CCCeEEecCCCCCCCCccCCCC-----CCC
Q 012436 194 IAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLE-----RST 267 (464)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~-~~~i~~i~~~~d~~~~~~~~~~-----~~~ 267 (464)
....... . ..++..++.+|.++++|+..++.+.+.++. ..++.++|||+|.+.+...... ...
T Consensus 119 ------~~~~~~~--~---~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~ 187 (353)
T cd03811 119 ------LKRKLRL--L---LLIRKLYRRADKIVAVSEGVKEDLLKLLGIPPDKIEVIYNPIDIEEIRALAEEPLELGIPP 187 (353)
T ss_pred ------hccchhH--H---HHHHhhccccceEEEeccchhhhHHHhhcCCccccEEecCCcChhhcCcccchhhhcCCCC
Confidence 0000000 0 356777899999999999999999998875 5789999999998877643332 245
Q ss_pred CCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChh
Q 012436 268 EYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYR 347 (464)
Q Consensus 268 ~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~ 347 (464)
+.++++++|++.+.||++.++++++.+.+.. ++++|+++|.++.. +.+++.++++++.++|.+.|+. +
T Consensus 188 ~~~~i~~~g~~~~~k~~~~~i~~~~~l~~~~----~~~~l~i~G~~~~~------~~~~~~~~~~~~~~~v~~~g~~--~ 255 (353)
T cd03811 188 DGPVILAVGRLSPQKGFDTLIRAFALLRKEG----PDARLVILGDGPLR------EELEALAKELGLADRVHFLGFQ--S 255 (353)
T ss_pred CceEEEEEecchhhcChHHHHHHHHHhhhcC----CCceEEEEcCCccH------HHHHHHHHhcCCCccEEEeccc--C
Confidence 6689999999999999999999999998774 58999999988643 6677888888988999999997 6
Q ss_pred HHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC--CHHHH---HHHHHHHHc
Q 012436 348 DLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ--NAEEY---ADAIVKIIS 422 (464)
Q Consensus 348 ~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~--~~~~l---a~~i~~l~~ 422 (464)
++.++|+.||++++||..|++|++++|||++|+|||+++.++. .+++.+ +.+|++++ +++++ ++++..+.+
T Consensus 256 ~~~~~~~~~d~~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~~~-~e~i~~---~~~g~~~~~~~~~~~~~~~~~i~~~~~ 331 (353)
T cd03811 256 NPYPYLKAADLFVLSSRYEGFPNVLLEAMALGTPVVATDCPGP-REILED---GENGLLVPVGDEAALAAAALALLDLLL 331 (353)
T ss_pred CHHHHHHhCCEEEeCcccCCCCcHHHHHHHhCCCEEEcCCCCh-HHHhcC---CCceEEECCCCHHHHHHHHHHHHhccC
Confidence 7999999999999999999999999999999999999999988 788888 89999886 78887 677778888
Q ss_pred CCHHHHHHHHHHHHHHH-HccC
Q 012436 423 MPETERLEMAAAARRRA-ARFS 443 (464)
Q Consensus 423 ~~~~~~~~~~~~~~~~~-~~~s 443 (464)
+++.++++++++++.+ ++|+
T Consensus 332 -~~~~~~~~~~~~~~~~~~~~~ 352 (353)
T cd03811 332 -DPELRERLAAAARERVAREYS 352 (353)
T ss_pred -ChHHHHHHHHHHHHHHHHHhc
Confidence 8989999999777777 7775
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-33 Score=274.05 Aligned_cols=280 Identities=14% Similarity=0.168 Sum_probs=215.2
Q ss_pred HHhhhcCCcEEEecccccccch-hhhccCceEEEEeeCCcchhhhhhcccccccccCCCcccccchhhhHHHHHHHHHHH
Q 012436 134 EALCKFTPLYYFDTSGYAFTYP-LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFS 212 (464)
Q Consensus 134 ~~l~~~~~Dvv~~~~~~~~~~~-~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (464)
+.+...++|++|.........+ +....++|.++++|.... .... ...... .+...+.
T Consensus 205 ~~L~~~~~di~i~dr~~~~~~~~~~~~~~~~~v~~lH~~h~---------------~~~~----~~~~~~---~~~~~y~ 262 (500)
T TIGR02918 205 KQLNLTKKDIIILDRSTGIGQAVLENKGPAKLGVVVHAEHF---------------SESA----TNETYI---LWNNYYE 262 (500)
T ss_pred HHHhCCCCCEEEEcCCcccchHHHhcCCCceEEEEEChhhh---------------cCcc----CcchhH---HHHHHHH
Confidence 4355568999986554333323 333668999999994221 0000 000000 0111111
Q ss_pred HHHHHHhhcCCEEEEcCHHHHHHHHHHhCC----CCCeEEecCCCCCCCCccCCCCCCCCCcEEEEEeccCCCCChHHHH
Q 012436 213 WMYGLVGSCADLAMVNSSWTQSHIEKLWGI----PDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQL 288 (464)
Q Consensus 213 ~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~----~~~i~~i~~~~d~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~ll 288 (464)
.... ..+.+|.++++|+..++.+.+.++. ..++.++|+|++...+.+ . ...+...++++||+.+.||++.++
T Consensus 263 ~~~~-~~~~~D~iI~~S~~~~~~l~~~~~~~~~~~~ki~viP~g~~~~~~~~--~-~~r~~~~il~vGrl~~~Kg~~~li 338 (500)
T TIGR02918 263 YQFS-NADYIDFFITATDIQNQILKNQFKKYYNIEPRIYTIPVGSLDELQYP--E-QERKPFSIITASRLAKEKHIDWLV 338 (500)
T ss_pred HHHh-chhhCCEEEECCHHHHHHHHHHhhhhcCCCCcEEEEcCCCcccccCc--c-cccCCeEEEEEeccccccCHHHHH
Confidence 1112 2477899999999999888776532 568899999986544332 1 223457899999999999999999
Q ss_pred HHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCC
Q 012436 289 EAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHF 368 (464)
Q Consensus 289 ~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~ 368 (464)
+|+..+.+.. |+++|.|+|+|+.. ++++++++++++.++|.|.|+. ++.++|+.||++++||..|||
T Consensus 339 ~A~~~l~~~~----p~~~l~i~G~G~~~------~~l~~~i~~~~l~~~V~f~G~~---~~~~~~~~adv~v~pS~~Egf 405 (500)
T TIGR02918 339 KAVVKAKKSV----PELTFDIYGEGGEK------QKLQKIINENQAQDYIHLKGHR---NLSEVYKDYELYLSASTSEGF 405 (500)
T ss_pred HHHHHHHhhC----CCeEEEEEECchhH------HHHHHHHHHcCCCCeEEEcCCC---CHHHHHHhCCEEEEcCccccc
Confidence 9999998776 79999999998643 7899999999999999999975 688899999999999999999
Q ss_pred ChHHHHHHHhCCcEEEeCCC-CCccceecccCCccceeecC-C---------HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 012436 369 GISVVEYMAAGAIPIAHNSA-GPKMDIVLEEDGQQTGFLAQ-N---------AEEYADAIVKIISMPETERLEMAAAARR 437 (464)
Q Consensus 369 ~~~~~Ea~a~G~PvI~~~~~-~~~~~~v~~~~~~~~g~~~~-~---------~~~la~~i~~l~~~~~~~~~~~~~~~~~ 437 (464)
|++++||||||+|||+++.+ |. .|++.+ +.+|++++ + +++++++|.++++ ++ .++++++++++
T Consensus 406 gl~~lEAma~G~PVI~~dv~~G~-~eiI~~---g~nG~lv~~~~~~~d~~~~~~~la~~I~~ll~-~~-~~~~~~~~a~~ 479 (500)
T TIGR02918 406 GLTLMEAVGSGLGMIGFDVNYGN-PTFIED---NKNGYLIPIDEEEDDEDQIITALAEKIVEYFN-SN-DIDAFHEYSYQ 479 (500)
T ss_pred cHHHHHHHHhCCCEEEecCCCCC-HHHccC---CCCEEEEeCCccccchhHHHHHHHHHHHHHhC-hH-HHHHHHHHHHH
Confidence 99999999999999999986 56 799999 99999986 2 8899999999985 44 68899999999
Q ss_pred HHHccCHHHHHHHHHHHHHHH
Q 012436 438 RAARFSEQRFYEDFKAAIRPI 458 (464)
Q Consensus 438 ~~~~~s~~~~~~~~~~~~~~~ 458 (464)
.+++|||+.++++|.++++++
T Consensus 480 ~a~~fs~~~v~~~w~~ll~~~ 500 (500)
T TIGR02918 480 IAEGFLTANIIEKWKKLVREV 500 (500)
T ss_pred HHHhcCHHHHHHHHHHHHhhC
Confidence 889999999999999998763
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-33 Score=268.07 Aligned_cols=222 Identities=21% Similarity=0.256 Sum_probs=193.9
Q ss_pred HHHhhcCCEEEEcCHHHHHHHHHHhCC-CCCeEEecCCCCCCCCccCCCCCCCCCcEEEEEeccCCCCChHHHHHHHHHH
Q 012436 216 GLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVA 294 (464)
Q Consensus 216 ~~~~~~ad~vi~~S~~~~~~~~~~~~~-~~~i~~i~~~~d~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l 294 (464)
+.+++.+|.++++|+..++.+.+.++. .+++.++++|++.+.+... ...++.+.++++|++.+.||++.+++|+..+
T Consensus 178 ~~~~~~~d~ii~~S~~~~~~l~~~~~~~~~ki~vi~~gv~~~~~~~~--~~~~~~~~il~~Grl~~~Kg~~~li~a~~~l 255 (407)
T cd04946 178 RYLLSSLDAVFPCSEQGRNYLQKRYPAYKEKIKVSYLGVSDPGIISK--PSKDDTLRIVSCSYLVPVKRVDLIIKALAAL 255 (407)
T ss_pred HHHHhcCCEEEECCHHHHHHHHHHCCCccccEEEEECCcccccccCC--CCCCCCEEEEEeeccccccCHHHHHHHHHHH
Confidence 455789999999999999999998876 6788999999988765532 2335668999999999999999999999999
Q ss_pred HHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHHHhc--CcEEEEcCCCCCCChHH
Q 012436 295 LRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGG--AVVGIHSMIDEHFGISV 372 (464)
Q Consensus 295 ~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~--ad~~v~ps~~e~~~~~~ 372 (464)
.+..++ .+++++++|+|+.. +.+++++++.+..++|.|+|+++++++.++|+. +|++++||..||+|+++
T Consensus 256 ~~~~p~--~~l~~~iiG~g~~~------~~l~~~~~~~~~~~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~l 327 (407)
T cd04946 256 AKARPS--IKIKWTHIGGGPLE------DTLKELAESKPENISVNFTGELSNSEVYKLYKENPVDVFVNLSESEGLPVSI 327 (407)
T ss_pred HHhCCC--ceEEEEEEeCchHH------HHHHHHHHhcCCCceEEEecCCChHHHHHHHhhcCCCEEEeCCccccccHHH
Confidence 887521 25677889988643 678888888777889999999999999999976 78999999999999999
Q ss_pred HHHHHhCCcEEEeCCCCCccceecccCCccceeecC---CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-HccCHHHHH
Q 012436 373 VEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ---NAEEYADAIVKIISMPETERLEMAAAARRRA-ARFSEQRFY 448 (464)
Q Consensus 373 ~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~---~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~-~~~s~~~~~ 448 (464)
+|||++|+|||+|+.+|. .|++.+ +.+|++++ |+++++++|.++++ |++.+++|+++|++.+ ++|+|+...
T Consensus 328 lEAma~G~PVIas~vgg~-~e~i~~---~~~G~l~~~~~~~~~la~~I~~ll~-~~~~~~~m~~~ar~~~~~~f~~~~~~ 402 (407)
T cd04946 328 MEAMSFGIPVIATNVGGT-PEIVDN---GGNGLLLSKDPTPNELVSSLSKFID-NEEEYQTMREKAREKWEENFNASKNY 402 (407)
T ss_pred HHHHHcCCCEEeCCCCCc-HHHhcC---CCcEEEeCCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHcCHHHhH
Confidence 999999999999999998 788888 78998874 78999999999999 9999999999999999 999999999
Q ss_pred HHHH
Q 012436 449 EDFK 452 (464)
Q Consensus 449 ~~~~ 452 (464)
+++.
T Consensus 403 ~~~~ 406 (407)
T cd04946 403 REFA 406 (407)
T ss_pred HHhc
Confidence 8875
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-32 Score=258.85 Aligned_cols=251 Identities=18% Similarity=0.233 Sum_probs=187.5
Q ss_pred hhhcCCcEEEecccccccc--h---hhhccCceEEEEeeCCcchhhhhhcccccccccCCCcccccchhhhHHHHHHHHH
Q 012436 136 LCKFTPLYYFDTSGYAFTY--P---LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTF 210 (464)
Q Consensus 136 l~~~~~Dvv~~~~~~~~~~--~---~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (464)
.+..+||+||.++...... . +++..++|+|+++|.... ... .. . ........+.
T Consensus 96 ~~~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~--~~~-~~----------------~--~~~~~~~~~~ 154 (371)
T PLN02275 96 VKIPRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGY--TLL-AL----------------S--LGRSHPLVRL 154 (371)
T ss_pred hhCCCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccH--HHH-hc----------------c--cCCCCHHHHH
Confidence 3567999999765443221 1 444678999999993210 000 00 0 0001123445
Q ss_pred HHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCCCC---CCCCCcEEEEEeccCCCCChHHH
Q 012436 211 FSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLE---RSTEYPAIISVAQFRPEKAHPLQ 287 (464)
Q Consensus 211 ~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~~~---~~~~~~~i~~~G~~~~~K~~~~l 287 (464)
+.++++.+++.+|.++++|+.+++.+.+.++.+ +.+++|+. .+.+.+.... ..++...++++|++.+.||++.+
T Consensus 155 ~~~~e~~~~~~ad~ii~~S~~~~~~l~~~~g~~--i~vi~n~~-~~~f~~~~~~~~~~~~~~~~i~~~grl~~~k~~~~l 231 (371)
T PLN02275 155 YRWYERHYGKMADGHLCVTKAMQHELDQNWGIR--ATVLYDQP-PEFFRPASLEIRLRPNRPALVVSSTSWTPDEDFGIL 231 (371)
T ss_pred HHHHHHHHHhhCCEEEECCHHHHHHHHHhcCCC--eEEECCCC-HHHcCcCCchhcccCCCcEEEEEeCceeccCCHHHH
Confidence 667788889999999999999999998766543 88999984 3444322111 11334578899999999999999
Q ss_pred HHHHHHHHHHhc-------------CCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEcc-CCChhHHHHHH
Q 012436 288 LEAFSVALRKLD-------------ADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYK-NLLYRDLVKLL 353 (464)
Q Consensus 288 l~a~~~l~~~~~-------------~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g-~~~~~~~~~~l 353 (464)
++|+..+..... ...|+++|+++|+|+.. +++++.++++++.+ +.|.+ +++.+++.++|
T Consensus 232 i~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG~G~~~------~~l~~~~~~~~l~~-v~~~~~~~~~~~~~~~l 304 (371)
T PLN02275 232 LEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITGKGPQK------AMYEEKISRLNLRH-VAFRTMWLEAEDYPLLL 304 (371)
T ss_pred HHHHHHHHhhhhhccccccccccccccCCCeEEEEEeCCCCH------HHHHHHHHHcCCCc-eEEEcCCCCHHHHHHHH
Confidence 999988742110 01268999999999864 78999999999875 77765 68999999999
Q ss_pred hcCcEEEEcC---CCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecCCHHHHHHHHHHHH
Q 012436 354 GGAVVGIHSM---IDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQNAEEYADAIVKII 421 (464)
Q Consensus 354 ~~ad~~v~ps---~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~~~~~la~~i~~l~ 421 (464)
+.||++++|+ ..|++|++++||||||+|||+++.++. .|++.+ +.+|++++++++++++|.+++
T Consensus 305 ~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~-~eiv~~---g~~G~lv~~~~~la~~i~~l~ 371 (371)
T PLN02275 305 GSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI-GELVKD---GKNGLLFSSSSELADQLLELL 371 (371)
T ss_pred HhCCEEEEeccccccccccHHHHHHHHCCCCEEEecCCCh-HHHccC---CCCeEEECCHHHHHHHHHHhC
Confidence 9999999763 248899999999999999999999887 799999 899999999999999998774
|
|
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-30 Score=249.73 Aligned_cols=276 Identities=10% Similarity=0.045 Sum_probs=198.4
Q ss_pred hhhhHHHHHHhhhcCCcEEEecccccccch-----hhhccCceEEEEeeCCcchhhhhhcccccccccCCCcccccchhh
Q 012436 126 FGSVYLSWEALCKFTPLYYFDTSGYAFTYP-----LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWL 200 (464)
Q Consensus 126 ~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~-----~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (464)
+..+-...+.+..++|||||.......... .++..+ |+|..+|.... .++.. | ..
T Consensus 420 I~p~gdI~~~L~~f~PDVVHLatP~~LGw~~~Glr~ArKl~-PVVasyHTny~-----eYl~~----y----------~~ 479 (794)
T PLN02501 420 IIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYL-----EYIKR----E----------KN 479 (794)
T ss_pred ccchHHHHHHhhccCCCEEEECCchhhccHHHHHHHHHHcC-CeEEEEeCCcH-----HHHhH----h----------cc
Confidence 333455667789999999996554333222 566777 89999995331 11110 0 01
Q ss_pred hHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCCCC-------CCCCCcEEE
Q 012436 201 SQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLE-------RSTEYPAII 273 (464)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~~~-------~~~~~~~i~ 273 (464)
........+...++.+... ||.++++|..+++ + + .......+|||.+.|.+.... .......++
T Consensus 480 g~L~~~llk~l~~~v~r~h--cD~VIaPS~atq~-L----~--~~vI~nVnGVDte~F~P~~r~~~~r~lgi~~~~kgiL 550 (794)
T PLN02501 480 GALQAFFVKHINNWVTRAY--CHKVLRLSAATQD-L----P--KSVICNVHGVNPKFLKIGEKVAEERELGQQAFSKGAY 550 (794)
T ss_pred hhHHHHHHHHHHHHHHHhh--CCEEEcCCHHHHH-h----c--ccceeecccccccccCCcchhHHHHhcCCccccCceE
Confidence 1122222222222222222 8999999977773 3 1 222222369999988743211 011224589
Q ss_pred EEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHHH
Q 012436 274 SVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLL 353 (464)
Q Consensus 274 ~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l 353 (464)
|+||+.+.||++.+++|++.+.... |+++|+|+|+|+.. ++++++++++++ +|.|+|.. ++..++|
T Consensus 551 fVGRLa~EKGld~LLeAla~L~~~~----pnvrLvIVGDGP~r------eeLe~la~eLgL--~V~FLG~~--dd~~~ly 616 (794)
T PLN02501 551 FLGKMVWAKGYRELIDLLAKHKNEL----DGFNLDVFGNGEDA------HEVQRAAKRLDL--NLNFLKGR--DHADDSL 616 (794)
T ss_pred EEEcccccCCHHHHHHHHHHHHhhC----CCeEEEEEcCCccH------HHHHHHHHHcCC--EEEecCCC--CCHHHHH
Confidence 9999999999999999999987765 68999999999864 778888888887 48999998 6667899
Q ss_pred hcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecCCHHHHHHHHHHHHcCCHHHHHHHHH
Q 012436 354 GGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQNAEEYADAIVKIISMPETERLEMAA 433 (464)
Q Consensus 354 ~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~~~~~la~~i~~l~~~~~~~~~~~~~ 433 (464)
+.+|+|++||..|+||++++||||||+|||+++.++. +++.+ +.+|++++|+++++++|.++++ ++..+..+.+
T Consensus 617 asaDVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~--e~V~~---g~nGll~~D~EafAeAI~~LLs-d~~~rl~~~a 690 (794)
T PLN02501 617 HGYKVFINPSISDVLCTATAEALAMGKFVVCADHPSN--EFFRS---FPNCLTYKTSEDFVAKVKEALA-NEPQPLTPEQ 690 (794)
T ss_pred HhCCEEEECCCcccchHHHHHHHHcCCCEEEecCCCC--ceEee---cCCeEecCCHHHHHHHHHHHHh-CchhhhHHHH
Confidence 9999999999999999999999999999999999875 44666 7888888899999999999999 8764433321
Q ss_pred HHHHHHHccCHHHHHHHHHHHH
Q 012436 434 AARRRAARFSEQRFYEDFKAAI 455 (464)
Q Consensus 434 ~~~~~~~~~s~~~~~~~~~~~~ 455 (464)
...+||+.+++++++.-
T Consensus 691 -----~~~~SWeAaadrLle~~ 707 (794)
T PLN02501 691 -----RYNLSWEAATQRFMEYS 707 (794)
T ss_pred -----HhhCCHHHHHHHHHHhh
Confidence 35899999999998754
|
|
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-31 Score=256.62 Aligned_cols=272 Identities=21% Similarity=0.249 Sum_probs=215.3
Q ss_pred hcCCcEEEecccccccch-hhhccCceEEEEeeCCcchhhhhhcccccccccCCCcccccchhhhHHHHHHHHHHHHHHH
Q 012436 138 KFTPLYYFDTSGYAFTYP-LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYG 216 (464)
Q Consensus 138 ~~~~Dvv~~~~~~~~~~~-~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (464)
..++|++|++........ +......+.++++|....... .......+...+.. . .
T Consensus 97 ~~~~diii~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~-------------------~~~~~~~~~~~~~~----~-~ 152 (372)
T cd04949 97 DTKPDVFILDRPTLDGQALLNMKKAAKVVVVLHSNHVSDN-------------------NDPVHSLINNFYEY----V-F 152 (372)
T ss_pred CCCCCEEEECCccccchhHHhccCCceEEEEEChHHhCCc-------------------ccccccccchhhHH----H-H
Confidence 378999997766554433 333456678888884321000 00000001111111 1 1
Q ss_pred HHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCCCCCCCCCcEEEEEeccCCCCChHHHHHHHHHHHH
Q 012436 217 LVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALR 296 (464)
Q Consensus 217 ~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~ 296 (464)
..++.+|.+++.|+..++.+.+.++...++.++|+|++.+.+...+ ....+...++++|++.+.||++.+++++..+.+
T Consensus 153 ~~~~~~d~ii~~s~~~~~~l~~~~~~~~~v~~ip~g~~~~~~~~~~-~~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~ 231 (372)
T cd04949 153 ENLDKVDGVIVATEQQKQDLQKQFGNYNPIYTIPVGSIDPLKLPAQ-FKQRKPHKIITVARLAPEKQLDQLIKAFAKVVK 231 (372)
T ss_pred hChhhCCEEEEccHHHHHHHHHHhCCCCceEEEcccccChhhcccc-hhhcCCCeEEEEEccCcccCHHHHHHHHHHHHH
Confidence 2247899999999999999999887655689999999987665321 123455789999999999999999999999988
Q ss_pred HhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHH
Q 012436 297 KLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYM 376 (464)
Q Consensus 297 ~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~ 376 (464)
+. |+++|+++|.++.. ..++..++++++.++|.+.|+. +++.++|+.||++++||..|++|++++|||
T Consensus 232 ~~----~~~~l~i~G~g~~~------~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAm 299 (372)
T cd04949 232 QV----PDATLDIYGYGDEE------EKLKELIEELGLEDYVFLKGYT--RDLDEVYQKAQLSLLTSQSEGFGLSLMEAL 299 (372)
T ss_pred hC----CCcEEEEEEeCchH------HHHHHHHHHcCCcceEEEcCCC--CCHHHHHhhhhEEEecccccccChHHHHHH
Confidence 76 69999999998643 5677777888989999999965 889999999999999999999999999999
Q ss_pred HhCCcEEEeCCC-CCccceecccCCccceeecC--CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHH
Q 012436 377 AAGAIPIAHNSA-GPKMDIVLEEDGQQTGFLAQ--NAEEYADAIVKIISMPETERLEMAAAARRRAARFSEQRFYEDF 451 (464)
Q Consensus 377 a~G~PvI~~~~~-~~~~~~v~~~~~~~~g~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 451 (464)
++|+|||+++.+ |. .+++.+ +.+|++++ |+++++++|.++++ |++.++++++++++.+++|||+.++++|
T Consensus 300 a~G~PvI~~~~~~g~-~~~v~~---~~~G~lv~~~d~~~la~~i~~ll~-~~~~~~~~~~~a~~~~~~~s~~~~~~~w 372 (372)
T cd04949 300 SHGLPVISYDVNYGP-SEIIED---GENGYLVPKGDIEALAEAIIELLN-DPKLLQKFSEAAYENAERYSEENVWEKW 372 (372)
T ss_pred hCCCCEEEecCCCCc-HHHccc---CCCceEeCCCcHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHhhHHHHHhcC
Confidence 999999999987 55 788888 89999997 99999999999999 9999999999999999999999998864
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.7e-30 Score=239.13 Aligned_cols=217 Identities=12% Similarity=0.098 Sum_probs=169.9
Q ss_pred HHH-hhcCCEEEEcCHHHHHHHHHHhCC-CCCeEEecCCCCCCCCccCCCCCCCCCcEEEEEeccCCCCChHHHHHHHHH
Q 012436 216 GLV-GSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSV 293 (464)
Q Consensus 216 ~~~-~~~ad~vi~~S~~~~~~~~~~~~~-~~~i~~i~~~~d~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~ll~a~~~ 293 (464)
... .+.+|.++++|+.+++.+.+.+.. ++++.+||||+|.+.+.+... ...+..+++++|++.+.||++.+++|++.
T Consensus 88 ~~~~~~~ad~ii~~S~~~~~~l~~~g~~~~~~i~vIpNGVd~~~f~~~~~-~~~~~~vl~~~g~~~~~Kg~d~Li~A~~~ 166 (331)
T PHA01630 88 YFFRNQPVDEIVVPSQWSKNAFYTSGLKIPQPIYVIPHNLNPRMFEYKPK-EKPHPCVLAILPHSWDRKGGDIVVKIFHE 166 (331)
T ss_pred HHHhhccCCEEEECCHHHHHHHHHcCCCCCCCEEEECCCCCHHHcCCCcc-ccCCCEEEEEeccccccCCHHHHHHHHHH
Confidence 444 588999999999999999876422 468999999999887764322 22344567778888999999999999999
Q ss_pred HHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHH
Q 012436 294 ALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVV 373 (464)
Q Consensus 294 l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~ 373 (464)
+.++. ++++++++|++... ..+. ++. .+.|.++.+++.++|+.||++++||..|+||++++
T Consensus 167 l~~~~----~~~~llivG~~~~~------~~l~------~~~---~~~~~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~l 227 (331)
T PHA01630 167 LQNEG----YDFYFLIKSSNMLD------PRLF------GLN---GVKTPLPDDDIYSLFAGCDILFYPVRGGAFEIPVI 227 (331)
T ss_pred HHhhC----CCEEEEEEeCcccc------hhhc------ccc---ceeccCCHHHHHHHHHhCCEEEECCccccCChHHH
Confidence 98765 58999999965422 1111 121 13567899999999999999999999999999999
Q ss_pred HHHHhCCcEEEeCCCCCccceecccCCcccee--------------------ecC-CHHHHHHHHHHHHcCCH--HHHHH
Q 012436 374 EYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGF--------------------LAQ-NAEEYADAIVKIISMPE--TERLE 430 (464)
Q Consensus 374 Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~--------------------~~~-~~~~la~~i~~l~~~~~--~~~~~ 430 (464)
||||||+|||+|+.+|. .|++.+ +.+|+ +++ |.+++++++.+++. |+ +.+++
T Consensus 228 EAMA~G~PVIas~~gg~-~E~i~~---~~ng~lv~~~~~~~~~~~~~~~~G~~v~~~~~~~~~~ii~~l~-~~~~~~~~~ 302 (331)
T PHA01630 228 EALALGLDVVVTEKGAW-SEWVLS---NLDVYWIKSGRKPKLWYTNPIHVGYFLDPDIEDAYQKLLEALA-NWTPEKKKE 302 (331)
T ss_pred HHHHcCCCEEEeCCCCc-hhhccC---CCceEEeeecccccccccCCcccccccCCCHHHHHHHHHHHHh-CCCHHHHHH
Confidence 99999999999999987 688877 65544 444 78899999999888 73 44444
Q ss_pred -HHHHHHHHHHccCHHHHHHHHHHHHHH
Q 012436 431 -MAAAARRRAARFSEQRFYEDFKAAIRP 457 (464)
Q Consensus 431 -~~~~~~~~~~~~s~~~~~~~~~~~~~~ 457 (464)
+..+++...++|||+.+++++.++|++
T Consensus 303 ~~~~~~~~~~~~fs~~~ia~k~~~l~~~ 330 (331)
T PHA01630 303 NLEGRAILYRENYSYNAIAKMWEKILEK 330 (331)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 444444444999999999999999874
|
|
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.9e-28 Score=233.58 Aligned_cols=338 Identities=13% Similarity=0.106 Sum_probs=228.9
Q ss_pred cceEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeeccccccc
Q 012436 34 TTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEE 113 (464)
Q Consensus 34 ~mkI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (464)
+|||+++.... ||.++++.+++++|.+.||++ .+++...+ ...... ...++ +++.++.......
T Consensus 1 ~~~i~i~~~g~---gG~~~~~~~la~~L~~~g~ev--~vv~~~~~----~~~~~~-~~~g~------~~~~~~~~~~~~~ 64 (357)
T PRK00726 1 MKKILLAGGGT---GGHVFPALALAEELKKRGWEV--LYLGTARG----MEARLV-PKAGI------EFHFIPSGGLRRK 64 (357)
T ss_pred CcEEEEEcCcc---hHhhhHHHHHHHHHHhCCCEE--EEEECCCc----hhhhcc-ccCCC------cEEEEeccCcCCC
Confidence 38999875544 699999999999999999555 44444321 000000 00122 4444433211111
Q ss_pred ccCcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccch--hhhccCceEEEEeeCCcchhhhhhcccccccccCCC
Q 012436 114 STYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNN 191 (464)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~--~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~ 191 (464)
....+......++....++.+.+++.+||+||++........ .++..++|+|++.|...
T Consensus 65 ~~~~~l~~~~~~~~~~~~~~~~ik~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~------------------- 125 (357)
T PRK00726 65 GSLANLKAPFKLLKGVLQARKILKRFKPDVVVGFGGYVSGPGGLAARLLGIPLVIHEQNAV------------------- 125 (357)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCcchhHHHHHHHHcCCCEEEEcCCCC-------------------
Confidence 111111122233555667777889999999998875544332 45578899998655210
Q ss_pred cccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCCC----CCCC
Q 012436 192 ASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL----ERST 267 (464)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~~----~~~~ 267 (464)
.. ...++.++.+|.+++.++... .+ ....++.+++||++.+.+..... ...+
T Consensus 126 --------~~-----------~~~r~~~~~~d~ii~~~~~~~---~~--~~~~~i~vi~n~v~~~~~~~~~~~~~~~~~~ 181 (357)
T PRK00726 126 --------PG-----------LANKLLARFAKKVATAFPGAF---PE--FFKPKAVVTGNPVREEILALAAPPARLAGRE 181 (357)
T ss_pred --------cc-----------HHHHHHHHHhchheECchhhh---hc--cCCCCEEEECCCCChHhhcccchhhhccCCC
Confidence 00 123455578899999887542 22 23689999999998765542111 1123
Q ss_pred CCcEEEEEeccCCCCChHHHH-HHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCh
Q 012436 268 EYPAIISVAQFRPEKAHPLQL-EAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLY 346 (464)
Q Consensus 268 ~~~~i~~~G~~~~~K~~~~ll-~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~ 346 (464)
+.+.++++|+....|+...++ +|+.++.+. + ..++++|++.. +++.+..+ +++. |.+.|++
T Consensus 182 ~~~~i~~~gg~~~~~~~~~~l~~a~~~~~~~-----~-~~~~~~G~g~~-------~~~~~~~~-~~~~--v~~~g~~-- 243 (357)
T PRK00726 182 GKPTLLVVGGSQGARVLNEAVPEALALLPEA-----L-QVIHQTGKGDL-------EEVRAAYA-AGIN--AEVVPFI-- 243 (357)
T ss_pred CCeEEEEECCcHhHHHHHHHHHHHHHHhhhC-----c-EEEEEcCCCcH-------HHHHHHhh-cCCc--EEEeehH--
Confidence 557888999888888776555 888877432 2 45778898852 44444445 6653 9999999
Q ss_pred hHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCc-------cceecccCCccceeecC--C--HHHHHH
Q 012436 347 RDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPK-------MDIVLEEDGQQTGFLAQ--N--AEEYAD 415 (464)
Q Consensus 347 ~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~-------~~~v~~~~~~~~g~~~~--~--~~~la~ 415 (464)
+++.++|+.||+++.++ .+.+++|||++|+|+|+++.++.. .+.+.+ .++|++++ | ++++++
T Consensus 244 ~~~~~~~~~~d~~i~~~----g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~---~~~g~~~~~~~~~~~~l~~ 316 (357)
T PRK00726 244 DDMAAAYAAADLVICRA----GASTVAELAAAGLPAILVPLPHAADDHQTANARALVD---AGAALLIPQSDLTPEKLAE 316 (357)
T ss_pred hhHHHHHHhCCEEEECC----CHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHH---CCCEEEEEcccCCHHHHHH
Confidence 89999999999999865 268899999999999998764321 134555 67888775 4 999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q 012436 416 AIVKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIR 456 (464)
Q Consensus 416 ~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 456 (464)
+|.++++ |++.++++++++++.++.++.+.+++.+.++++
T Consensus 317 ~i~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 317 KLLELLS-DPERLEAMAEAARALGKPDAAERLADLIEELAR 356 (357)
T ss_pred HHHHHHc-CHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHhh
Confidence 9999999 999999999999988888999999998888764
|
|
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-27 Score=217.53 Aligned_cols=214 Identities=16% Similarity=0.166 Sum_probs=163.7
Q ss_pred hcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCCCC----------CCCCCcEEEEEeccCCCCChHHHHH
Q 012436 220 SCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLE----------RSTEYPAIISVAQFRPEKAHPLQLE 289 (464)
Q Consensus 220 ~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~~~----------~~~~~~~i~~~G~~~~~K~~~~ll~ 289 (464)
.+.+.+|++|+.+++.+.+. |.+..+ .|++|+|.+.|.+.... ..++.+.++++||+.++||++.+++
T Consensus 91 ~~~~~vIavS~~t~~~L~~~-G~~~~i-~I~~GVD~~~f~p~~~~~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~ 168 (335)
T PHA01633 91 LQDVKFIPNSKFSAENLQEV-GLQVDL-PVFHGINFKIVENAEKLVPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQ 168 (335)
T ss_pred hcCCEEEeCCHHHHHHHHHh-CCCCce-eeeCCCChhhcCccchhhHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHH
Confidence 44669999999999999876 544444 47889998877642210 0135578999999999999999999
Q ss_pred HHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEc---cCCChhHHHHHHhcCcEEEEcCCCC
Q 012436 290 AFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFY---KNLLYRDLVKLLGGAVVGIHSMIDE 366 (464)
Q Consensus 290 a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~---g~~~~~~~~~~l~~ad~~v~ps~~e 366 (464)
|++.+.++..+..++++++++|.+ . .+++++.++|+|. |+++.+++.++|++||++++||..|
T Consensus 169 A~~~L~~~~p~~~~~i~l~ivG~~----------~----~~~l~l~~~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~E 234 (335)
T PHA01633 169 VFNELNTKYPDIAKKIHFFVISHK----------Q----FTQLEVPANVHFVAEFGHNSREYIFAFYGAMDFTIVPSGTE 234 (335)
T ss_pred HHHHHHHhCCCccccEEEEEEcHH----------H----HHHcCCCCcEEEEecCCCCCHHHHHHHHHhCCEEEECCccc
Confidence 999998765211113578777731 1 2345677899998 5667899999999999999999999
Q ss_pred CCChHHHHHHHhCCcEEEeCCCCCccceecc---------------cCCccceeecC--CHHHHHHHHHHHHcCCHHHHH
Q 012436 367 HFGISVVEYMAAGAIPIAHNSAGPKMDIVLE---------------EDGQQTGFLAQ--NAEEYADAIVKIISMPETERL 429 (464)
Q Consensus 367 ~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~---------------~~~~~~g~~~~--~~~~la~~i~~l~~~~~~~~~ 429 (464)
+||++++|||+||+|||+++.++. .|++.+ ....+.||.++ |+++++++|.+++. .. ...
T Consensus 235 gfGlvlLEAMA~G~PVVas~~~~l-~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~-~~-~~~ 311 (335)
T PHA01633 235 GFGMPVLESMAMGTPVIHQLMPPL-DEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFE-LQ-DRE 311 (335)
T ss_pred cCCHHHHHHHHcCCCEEEccCCCc-eeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHh-cc-Chh
Confidence 999999999999999999999877 565331 00124567765 99999999999976 32 233
Q ss_pred HHHHHHHHHHHccCHHHHHHHHH
Q 012436 430 EMAAAARRRAARFSEQRFYEDFK 452 (464)
Q Consensus 430 ~~~~~~~~~~~~~s~~~~~~~~~ 452 (464)
..+.++++.+++|+|+.++++|+
T Consensus 312 ~~~~~~~~~a~~f~~~~~~~~~~ 334 (335)
T PHA01633 312 ERSMKLKELAKKYDIRNLYTRFL 334 (335)
T ss_pred hhhHHHHHHHHhcCHHHHHHHhh
Confidence 34667888889999999999986
|
|
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.6e-26 Score=222.11 Aligned_cols=335 Identities=16% Similarity=0.104 Sum_probs=221.9
Q ss_pred CcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeecccccccccCcceehhhhchhh
Q 012436 49 GGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGS 128 (464)
Q Consensus 49 G~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (464)
|-...+..++++|.+.++++++++.+... ........ .++. .+.+.+++.. .
T Consensus 61 Ge~~~~~~l~~~l~~~~~~~~i~~t~~t~--~~~~~~~~---~~~~----~~~~~~~P~d-------------------~ 112 (425)
T PRK05749 61 GETRAAIPLIRALRKRYPDLPILVTTMTP--TGSERAQA---LFGD----DVEHRYLPYD-------------------L 112 (425)
T ss_pred HHHHHHHHHHHHHHHhCCCCcEEEeCCCc--cHHHHHHH---hcCC----CceEEEecCC-------------------c
Confidence 67888899999999998888876654332 11222211 1111 1122222221 1
Q ss_pred hHHHHHHhhhcCCcEEEeccc--ccccchhhhccCceEEEEeeCCcchhhhhhcccccccccCCCcccccchhhhHHHHH
Q 012436 129 VYLSWEALCKFTPLYYFDTSG--YAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIV 206 (464)
Q Consensus 129 ~~~~~~~l~~~~~Dvv~~~~~--~~~~~~~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (464)
...+.+.++..+||++|.+.. ++..+..++..++|++++.|.-. ... ..
T Consensus 113 ~~~~~~~l~~~~Pd~v~~~~~~~~~~~l~~~~~~~ip~vl~~~~~~-----------------------~~s------~~ 163 (425)
T PRK05749 113 PGAVRRFLRFWRPKLVIIMETELWPNLIAELKRRGIPLVLANARLS-----------------------ERS------FK 163 (425)
T ss_pred HHHHHHHHHhhCCCEEEEEecchhHHHHHHHHHCCCCEEEEeccCC-----------------------hhh------HH
Confidence 234556688999999985533 22232345678999988755110 000 00
Q ss_pred HHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCC-CCCeEEecCCCCCCCCccCCCC---------CCCCCcEEEEEe
Q 012436 207 YYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLE---------RSTEYPAIISVA 276 (464)
Q Consensus 207 ~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~-~~~i~~i~~~~d~~~~~~~~~~---------~~~~~~~i~~~G 276 (464)
.++.+.++.+.+++.+|.+++.|+..++.+.+. |. ++ +.+++|. +.+........ ..++.++++++|
T Consensus 164 ~~~~~~~~~r~~~~~~d~ii~~S~~~~~~l~~~-g~~~~-i~vi~n~-~~d~~~~~~~~~~~~~~r~~~~~~~~vil~~~ 240 (425)
T PRK05749 164 RYQKFKRFYRLLFKNIDLVLAQSEEDAERFLAL-GAKNE-VTVTGNL-KFDIEVPPELAARAATLRRQLAPNRPVWIAAS 240 (425)
T ss_pred HHHHHHHHHHHHHHhCCEEEECCHHHHHHHHHc-CCCCC-cEecccc-cccCCCChhhHHHHHHHHHHhcCCCcEEEEeC
Confidence 112334566778899999999999999999886 44 34 7788874 22222110000 003456778877
Q ss_pred ccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCC------------
Q 012436 277 QFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNL------------ 344 (464)
Q Consensus 277 ~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~------------ 344 (464)
+ ..|+.+.+++|++.+.+.. |+++|+|+|+++++ .+++++.++++|+. .+.+.|..
T Consensus 241 ~--~~~~~~~ll~A~~~l~~~~----~~~~liivG~g~~r-----~~~l~~~~~~~gl~-~~~~~~~~~~~~~~~v~l~~ 308 (425)
T PRK05749 241 T--HEGEEELVLDAHRALLKQF----PNLLLILVPRHPER-----FKEVEELLKKAGLS-YVRRSQGEPPSADTDVLLGD 308 (425)
T ss_pred C--CchHHHHHHHHHHHHHHhC----CCcEEEEcCCChhh-----HHHHHHHHHhCCCc-EEEccCCCCCCCCCcEEEEe
Confidence 5 4678999999999987765 69999999998642 25788888888875 34443321
Q ss_pred ChhHHHHHHhcCcEEEE-cCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeec--CCHHHHHHHHHHHH
Q 012436 345 LYRDLVKLLGGAVVGIH-SMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLA--QNAEEYADAIVKII 421 (464)
Q Consensus 345 ~~~~~~~~l~~ad~~v~-ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~--~~~~~la~~i~~l~ 421 (464)
+.+|+..+|+.||++++ +|..|++|.+++|||+||+|||+++..+...++...- ..+|+++ .|+++++++|.+++
T Consensus 309 ~~~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~--~~~g~~~~~~d~~~La~~l~~ll 386 (425)
T PRK05749 309 TMGELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERL--LQAGAAIQVEDAEDLAKAVTYLL 386 (425)
T ss_pred cHHHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHH--HHCCCeEEECCHHHHHHHHHHHh
Confidence 13799999999999655 6677999999999999999999987543324554330 1245443 59999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHh
Q 012436 422 SMPETERLEMAAAARRRAARFSEQRFYEDFKAAIRPILC 460 (464)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 460 (464)
+ |++.+++|++++++.++.. ....+++.+.+.+.+.
T Consensus 387 ~-~~~~~~~m~~~a~~~~~~~--~~~~~~~~~~l~~~l~ 422 (425)
T PRK05749 387 T-DPDARQAYGEAGVAFLKQN--QGALQRTLQLLEPYLP 422 (425)
T ss_pred c-CHHHHHHHHHHHHHHHHhC--ccHHHHHHHHHHHhcc
Confidence 9 9999999999999998433 3566777777766554
|
|
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.5e-27 Score=226.00 Aligned_cols=357 Identities=11% Similarity=0.008 Sum_probs=222.8
Q ss_pred cccceEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeeccccc
Q 012436 32 NRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWI 111 (464)
Q Consensus 32 ~~~mkI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (464)
.+.|||++++... |+|....+..++++|.+.|++ ++.+........+.+.......+...+......+.+.....
T Consensus 2 ~~~~rili~t~~~--G~GH~~~a~al~~~l~~~g~~--~~~~~d~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~- 76 (380)
T PRK13609 2 IKNPKVLILTAHY--GNGHVQVAKTLEQTFRQKGIK--DVIVCDLFGESHPVITEITKYLYLKSYTIGKELYRLFYYGV- 76 (380)
T ss_pred CCCCeEEEEEcCC--CchHHHHHHHHHHHHHhcCCC--cEEEEEhHHhcchHHHHHHHHHHHHHHHHhHHHHHHHHhcc-
Confidence 4668999998776 568999999999999999965 33333222111111110000000000000000000000000
Q ss_pred ccccCcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccchhhh--ccCceEEEEeeCCcchhhhhhcccccccccC
Q 012436 112 EESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLAR--IFGCRVICYTHYPTISLDMISRVREGSSMYN 189 (464)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~~~~--~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~ 189 (464)
...................+.+.+++.+||+||++.+......+.+ ..++|++...++...
T Consensus 77 -~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~~~~~~~~~~~~~~~~~~ip~~~~~td~~~---------------- 139 (380)
T PRK13609 77 -EKIYDKKIFSWYANFGRKRLKLLLQAEKPDIVINTFPIIAVPELKKQTGISIPTYNVLTDFCL---------------- 139 (380)
T ss_pred -CcccchHHHHHHHHHHHHHHHHHHHHhCcCEEEEcChHHHHHHHHHhcCCCCCeEEEeCCCCC----------------
Confidence 0000000000001122356777889999999998765443222222 456887754431100
Q ss_pred CCcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCC-------
Q 012436 190 NNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLP------- 262 (464)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~------- 262 (464)
..+++.+++|.+++.|+..++.+.+.+..++++.+++++++.......+
T Consensus 140 ------------------------~~~~~~~~ad~i~~~s~~~~~~l~~~gi~~~ki~v~G~p~~~~f~~~~~~~~~~~~ 195 (380)
T PRK13609 140 ------------------------HKIWVHREVDRYFVATDHVKKVLVDIGVPPEQVVETGIPIRSSFELKINPDIIYNK 195 (380)
T ss_pred ------------------------CcccccCCCCEEEECCHHHHHHHHHcCCChhHEEEECcccChHHcCcCCHHHHHHH
Confidence 0123458899999999999999988633366888887776543211110
Q ss_pred CCCCCC-CcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEc
Q 012436 263 LERSTE-YPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFY 341 (464)
Q Consensus 263 ~~~~~~-~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~ 341 (464)
....++ ...+++.|+....|+++.+++++... |+++++++|++.. ...+++++.+++++ ++|+++
T Consensus 196 ~~l~~~~~~il~~~G~~~~~k~~~~li~~l~~~--------~~~~~viv~G~~~----~~~~~l~~~~~~~~--~~v~~~ 261 (380)
T PRK13609 196 YQLCPNKKILLIMAGAHGVLGNVKELCQSLMSV--------PDLQVVVVCGKNE----ALKQSLEDLQETNP--DALKVF 261 (380)
T ss_pred cCCCCCCcEEEEEcCCCCCCcCHHHHHHHHhhC--------CCcEEEEEeCCCH----HHHHHHHHHHhcCC--CcEEEE
Confidence 011123 34556678888889999988887532 4789888754321 23467777776654 689999
Q ss_pred cCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeC-CCCCcc---ceecccCCccceeecCCHHHHHHHH
Q 012436 342 KNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHN-SAGPKM---DIVLEEDGQQTGFLAQNAEEYADAI 417 (464)
Q Consensus 342 g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~-~~~~~~---~~v~~~~~~~~g~~~~~~~~la~~i 417 (464)
|++ +++.++|+.||+++. ++.|++++|||++|+|+|+++ .+|... +.+.+ .+.++...|+++++++|
T Consensus 262 g~~--~~~~~l~~~aD~~v~----~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~---~G~~~~~~~~~~l~~~i 332 (380)
T PRK13609 262 GYV--ENIDELFRVTSCMIT----KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFER---KGAAVVIRDDEEVFAKT 332 (380)
T ss_pred ech--hhHHHHHHhccEEEe----CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHh---CCcEEEECCHHHHHHHH
Confidence 999 679999999999884 455899999999999999986 444311 12222 34455556999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Q 012436 418 VKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIRPI 458 (464)
Q Consensus 418 ~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 458 (464)
.++++ |++.+++|++++++..+.++++.+++.+.+.+...
T Consensus 333 ~~ll~-~~~~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~ 372 (380)
T PRK13609 333 EALLQ-DDMKLLQMKEAMKSLYLPEPADHIVDDILAENHVE 372 (380)
T ss_pred HHHHC-CHHHHHHHHHHHHHhCCCchHHHHHHHHHHhhhhh
Confidence 99999 99999999999988777789999999999887653
|
|
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-26 Score=222.25 Aligned_cols=330 Identities=17% Similarity=0.141 Sum_probs=216.7
Q ss_pred eEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeeccccccccc
Q 012436 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (464)
Q Consensus 36 kI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (464)
||++..... ||.++++..++++|.+.|| +|.+++.... . ... .... .+++++.++.........
T Consensus 1 ~~~~~~~~~---gG~~~~~~~la~~l~~~G~--ev~v~~~~~~---~-~~~-~~~~------~~~~~~~~~~~~~~~~~~ 64 (350)
T cd03785 1 RILIAGGGT---GGHIFPALALAEELRERGA--EVLFLGTKRG---L-EAR-LVPK------AGIPLHTIPVGGLRRKGS 64 (350)
T ss_pred CEEEEecCc---hhhhhHHHHHHHHHHhCCC--EEEEEECCCc---c-hhh-cccc------cCCceEEEEecCcCCCCh
Confidence 355543333 6999999999999999995 4445554321 0 000 0000 112444443321111111
Q ss_pred CcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccch--hhhccCceEEEEeeCCcchhhhhhcccccccccCCCcc
Q 012436 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNAS 193 (464)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~--~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~ 193 (464)
+..+......+.....+.+.+++.+||+||+++....... .++..++|++++.|+..
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~i~~~~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~~~~~--------------------- 123 (350)
T cd03785 65 LKKLKAPFKLLKGVLQARKILKKFKPDVVVGFGGYVSGPVGLAAKLLGIPLVIHEQNAV--------------------- 123 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCcchHHHHHHHHhCCCEEEEcCCCC---------------------
Confidence 1111111222344455667788899999998765443222 45578899987555210
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCC----CCCCCCC
Q 012436 194 IAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLP----LERSTEY 269 (464)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~----~~~~~~~ 269 (464)
.. ...+...+.+|.++++|+...+. .+ +.++.+++||+|.+.+...+ ...+++.
T Consensus 124 ------~~-----------~~~~~~~~~~~~vi~~s~~~~~~----~~-~~~~~~i~n~v~~~~~~~~~~~~~~~~~~~~ 181 (350)
T cd03785 124 ------PG-----------LANRLLARFADRVALSFPETAKY----FP-KDKAVVTGNPVREEILALDRERARLGLRPGK 181 (350)
T ss_pred ------cc-----------HHHHHHHHhhCEEEEcchhhhhc----CC-CCcEEEECCCCchHHhhhhhhHHhcCCCCCC
Confidence 00 11244457799999999998876 22 67899999999977654321 1223455
Q ss_pred cEEEEEeccCCCCChHH-HHHHHHHHHHHhcCCCCCcE-EEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChh
Q 012436 270 PAIISVAQFRPEKAHPL-QLEAFSVALRKLDADLPRPR-LQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYR 347 (464)
Q Consensus 270 ~~i~~~G~~~~~K~~~~-ll~a~~~l~~~~~~~~p~~~-l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~ 347 (464)
+++++.|+....|+... ++++++.+.. ++++ ++++|.+ . .+++++.++++ .++|++.|++ +
T Consensus 182 ~~i~~~~g~~~~~~~~~~l~~a~~~l~~------~~~~~~~i~G~g-~------~~~l~~~~~~~--~~~v~~~g~~--~ 244 (350)
T cd03785 182 PTLLVFGGSQGARAINEAVPEALAELLR------KRLQVIHQTGKG-D------LEEVKKAYEEL--GVNYEVFPFI--D 244 (350)
T ss_pred eEEEEECCcHhHHHHHHHHHHHHHHhhc------cCeEEEEEcCCc-c------HHHHHHHHhcc--CCCeEEeehh--h
Confidence 67878877766777654 5588887753 2555 4466776 2 25566666665 4689999998 8
Q ss_pred HHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCC-------ccceecccCCccceeecC----CHHHHHHH
Q 012436 348 DLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGP-------KMDIVLEEDGQQTGFLAQ----NAEEYADA 416 (464)
Q Consensus 348 ~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~-------~~~~v~~~~~~~~g~~~~----~~~~la~~ 416 (464)
++.++|+.||+++.++. +++++|||++|+|+|+++.++. ..+.+.+ +++|++++ |+++++++
T Consensus 245 ~~~~~l~~ad~~v~~sg----~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~---~g~g~~v~~~~~~~~~l~~~ 317 (350)
T cd03785 245 DMAAAYAAADLVISRAG----ASTVAELAALGLPAILIPLPYAADDHQTANARALVK---AGAAVLIPQEELTPERLAAA 317 (350)
T ss_pred hHHHHHHhcCEEEECCC----HhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHh---CCCEEEEecCCCCHHHHHHH
Confidence 99999999999997652 6889999999999999876531 0234455 57888875 79999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHHHHccCHHHHHH
Q 012436 417 IVKIISMPETERLEMAAAARRRAARFSEQRFYE 449 (464)
Q Consensus 417 i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~ 449 (464)
|.++++ |++.++++++++++.++.+..+++++
T Consensus 318 i~~ll~-~~~~~~~~~~~~~~~~~~~~~~~i~~ 349 (350)
T cd03785 318 LLELLS-DPERLKAMAEAARSLARPDAAERIAD 349 (350)
T ss_pred HHHHhc-CHHHHHHHHHHHHhcCCCCHHHHHHh
Confidence 999999 99999999999998877777776654
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.8e-26 Score=214.02 Aligned_cols=394 Identities=23% Similarity=0.270 Sum_probs=271.2
Q ss_pred cccccccceEEEecCCCCCCCCcchhhHHHHHHhhh---------hCCCCceEEEcccCCCCchh-HHHHHHhhcCcccC
Q 012436 28 NARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQE---------ESPDLDCIVYTGDHDAFPDS-LLARAVDRFGVELL 97 (464)
Q Consensus 28 ~~~~~~~mkI~~~~~~~~~~GG~~~~~~~l~~~L~~---------~g~~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 97 (464)
.......+++.+.|+..+.| |+++-..+.+-.+.. .| ..|++++...+....+ ........+....
T Consensus 28 ~t~~~~~~~~~~~~~~~~~g-g~er~~v~~~~~l~s~~~~lg~~d~G--~qV~~l~~h~~al~~~~~~~~~~~~l~~~~- 103 (495)
T KOG0853|consen 28 STPEKPFEHVTFIHPDLGIG-GAERLVVDAAVHLLSGQDVLGLPDTG--GQVVYLTSHEDALEMPLLLRCFAETLDGTP- 103 (495)
T ss_pred ccccccchhheeeccccccC-chHHHhHHHHHHHHhcccccCCCCCC--ceEEEEehhhhhhcchHHHHHHHHHhcCCC-
Confidence 34455668999999998877 999998888888888 99 5555666544322111 1122222222211
Q ss_pred CCceeeeeeccccccccc--CcceehhhhchhhhH----HHHHHhhhcCCcEEEecccccccchhhh-cc----CceEEE
Q 012436 98 HPPKVVHLYRRKWIEEST--YPRFTMIGQSFGSVY----LSWEALCKFTPLYYFDTSGYAFTYPLAR-IF----GCRVIC 166 (464)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~----~~~~~l~~~~~Dvv~~~~~~~~~~~~~~-~~----~~p~v~ 166 (464)
++.++ ..|.+... +.+.....+....+. .+.+.. .+.|+++.... ....++.+ .. ...+.+
T Consensus 104 -~i~vv----~~~lP~~~~~~~~~~~~~~~~~il~~~~~~~~k~~--~~~d~~i~d~~-~~~~~l~~~~~~p~~~~~i~~ 175 (495)
T KOG0853|consen 104 -PILVV----GDWLPRAMGQFLEQVAGCAYLRILRIPFGILFKWA--EKVDPIIEDFV-SACVPLLKQLSGPDVIIKIYF 175 (495)
T ss_pred -ceEEE----EeecCcccchhhhhhhccceeEEEEeccchhhhhh--hhhceeecchH-HHHHHHHHHhcCCcccceeEE
Confidence 22222 11111111 111111111111111 111122 46787774333 22334444 33 366778
Q ss_pred EeeCCcchhhhhhcccccccccCCCcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCC--CC
Q 012436 167 YTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI--PD 244 (464)
Q Consensus 167 ~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~--~~ 244 (464)
++|.|.. .+. .........++..+.+.+......+|.+++.|......++..+.. ..
T Consensus 176 ~~h~~~~------lla---------------~r~g~~~~l~~~~l~~~e~e~~~~~~~~~~ns~~~~~~f~~~~~~L~~~ 234 (495)
T KOG0853|consen 176 YCHFPDS------LLA---------------KRLGVLKVLYRHALDKIEEETTGLAWKILVNSYFTKRQFKATFVSLSNS 234 (495)
T ss_pred eccchHH------Hhc---------------cccCccceeehhhhhhhhhhhhhccceEecchhhhhhhhhhhhhhcCCC
Confidence 8896641 111 111233445666777778888899999999999999999887755 44
Q ss_pred CeEEecCCCCCCCCcc------CCCC--------CCCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcC-CCCCcEEEE
Q 012436 245 RIKRVYPPCDTSGLQV------LPLE--------RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDA-DLPRPRLQF 309 (464)
Q Consensus 245 ~i~~i~~~~d~~~~~~------~~~~--------~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~-~~p~~~l~i 309 (464)
++.++++++|.+.+.. .... ....+..+.-+.++.+.||++.+++++..+.+...+ ..++.++.+
T Consensus 235 d~~~~y~ei~~s~~~~~~~~~~~~~~~~~r~~~~v~~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~ 314 (495)
T KOG0853|consen 235 DITSTYPEIDGSWFTYGQYESHLELRLPVRLYRGVSGIDRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVV 314 (495)
T ss_pred CcceeeccccchhccccccccchhcccccceeeeecccceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEE
Confidence 4888999998765441 0000 112346777888999999999999999998877632 234678888
Q ss_pred EcCC----CCCccHHHHHHHHHHHHhcCC-CCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEE
Q 012436 310 VGSC----RNKSDEERLQSLKDKSIELKV-DGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIA 384 (464)
Q Consensus 310 ~G~~----~~~~~~~~~~~l~~~~~~~~l-~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~ 384 (464)
+|+. ...++.++.+++.++++++++ .+.|.|+...++.+...+++.+.+.+.....|.||++++|||+||+|||+
T Consensus 315 ~g~~G~d~~~sen~~~~~el~~lie~~~l~g~~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~glPvvA 394 (495)
T KOG0853|consen 315 AGSRGYDERDSENVEYLKELLSLIEEYDLLGQFVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMACGLPVVA 394 (495)
T ss_pred ecCCCccccchhhHHHHHHHHHHHHHhCccCceEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhcCCCEEE
Confidence 8832 234566789999999999998 57788888888888888888888766655669999999999999999999
Q ss_pred eCCCCCccceecccCCccceeecC-CHH---HHHHHHHHHHcCCHHHHHHHHHHHHHHH-HccCHHHHHHHHHHHHHHHH
Q 012436 385 HNSAGPKMDIVLEEDGQQTGFLAQ-NAE---EYADAIVKIISMPETERLEMAAAARRRA-ARFSEQRFYEDFKAAIRPIL 459 (464)
Q Consensus 385 ~~~~~~~~~~v~~~~~~~~g~~~~-~~~---~la~~i~~l~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~ 459 (464)
++.||+ .|++.+ +.+|++++ +.+ .+++++.++.. |++.+.++++++++++ +.|+|..+.+++.+.+.+..
T Consensus 395 t~~GGP-~EiV~~---~~tG~l~dp~~e~~~~~a~~~~kl~~-~p~l~~~~~~~G~~rV~e~fs~~~~~~ri~~~~~~~~ 469 (495)
T KOG0853|consen 395 TNNGGP-AEIVVH---GVTGLLIDPGQEAVAELADALLKLRR-DPELWARMGKNGLKRVKEMFSWQHYSERIASVLGKYL 469 (495)
T ss_pred ecCCCc-eEEEEc---CCcceeeCCchHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhHhcC
Confidence 999999 799999 99999997 666 69999999999 9999999999999999 77999999999998887654
|
|
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.5e-26 Score=219.70 Aligned_cols=329 Identities=16% Similarity=0.158 Sum_probs=211.2
Q ss_pred ceEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeecccccccc
Q 012436 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (464)
Q Consensus 35 mkI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (464)
|||+|+.... ||......+++++|.+.|| +|.++++... .. .......++ ++..++...+....
T Consensus 1 ~~i~~~~g~~---~g~~~~~~~La~~L~~~g~--eV~vv~~~~~--~~---~~~~~~~g~------~~~~i~~~~~~~~~ 64 (348)
T TIGR01133 1 KKVVLAAGGT---GGHIFPALAVAEELIKRGV--EVLWLGTKRG--LE---KRLVPKAGI------EFYFIPVGGLRRKG 64 (348)
T ss_pred CeEEEEeCcc---HHHHhHHHHHHHHHHhCCC--EEEEEeCCCc--ch---hcccccCCC------ceEEEeccCcCCCC
Confidence 5888875444 4666677799999999995 5555554321 00 011011122 44444432221111
Q ss_pred cCcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccch--hhhccCceEEEEeeCCcchhhhhhcccccccccCCCc
Q 012436 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (464)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~--~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~ 192 (464)
....+......+.....+.+.+++.+||+||++........ .++..++|++.+.+...
T Consensus 65 ~~~~l~~~~~~~~~~~~l~~~i~~~~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~~~~~~-------------------- 124 (348)
T TIGR01133 65 SFRLIKTPLKLLKAVFQARRILKKFKPDAVIGFGGYVSGPAGLAAKLLGIPLFHHEQNAV-------------------- 124 (348)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccHHHHHHHHHcCCCEEEECCCCC--------------------
Confidence 11112122223445556677789999999998766543322 45577889875332100
Q ss_pred ccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCC----CCCCCC
Q 012436 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLP----LERSTE 268 (464)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~----~~~~~~ 268 (464)
. .+.++++.+.+|.++++|+.+++.+ +..+++||++...+.... ...+++
T Consensus 125 -------~-----------~~~~~~~~~~~d~ii~~~~~~~~~~--------~~~~i~n~v~~~~~~~~~~~~~~~~~~~ 178 (348)
T TIGR01133 125 -------P-----------GLTNKLLSRFAKKVLISFPGAKDHF--------EAVLVGNPVRQEIRSLPVPRERFGLREG 178 (348)
T ss_pred -------c-----------cHHHHHHHHHhCeeEECchhHhhcC--------CceEEcCCcCHHHhcccchhhhcCCCCC
Confidence 0 0123455678999999999887665 236899999865443211 111245
Q ss_pred CcEEEEEeccCCCCChHH-HHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChh
Q 012436 269 YPAIISVAQFRPEKAHPL-QLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYR 347 (464)
Q Consensus 269 ~~~i~~~G~~~~~K~~~~-ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~ 347 (464)
.++++++|+....|++.. ++++++.+... ++++++++++.+ .+++++.++++++.+.+.|. . .
T Consensus 179 ~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~------~~~~~~~~g~~~------~~~l~~~~~~~~l~~~v~~~---~-~ 242 (348)
T TIGR01133 179 KPTILVLGGSQGAKILNELVPKALAKLAEK------GIQIVHQTGKND------LEKVKNVYQELGIEAIVTFI---D-E 242 (348)
T ss_pred CeEEEEECCchhHHHHHHHHHHHHHHHhhc------CcEEEEECCcch------HHHHHHHHhhCCceEEecCc---c-c
Confidence 678999998777888654 55788777542 455544443321 15677778777765444444 2 3
Q ss_pred HHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCc------cceecccCCccceeecC--C--HHHHHHHH
Q 012436 348 DLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPK------MDIVLEEDGQQTGFLAQ--N--AEEYADAI 417 (464)
Q Consensus 348 ~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~------~~~v~~~~~~~~g~~~~--~--~~~la~~i 417 (464)
++.++|+.||+++.++ | +.+++|||++|+|+|+++.++.. .+++.+ +++|++++ | +++++++|
T Consensus 243 ~~~~~l~~ad~~v~~~---g-~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~---~~~G~~~~~~~~~~~~l~~~i 315 (348)
T TIGR01133 243 NMAAAYAAADLVISRA---G-ASTVAELAAAGVPAILIPYPYAADDQYYNAKFLED---LGAGLVIRQKELLPEKLLEAL 315 (348)
T ss_pred CHHHHHHhCCEEEECC---C-hhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHH---CCCEEEEecccCCHHHHHHHH
Confidence 8999999999999864 2 68999999999999999875421 135666 78898875 4 99999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHHHHccCHHHHHH
Q 012436 418 VKIISMPETERLEMAAAARRRAARFSEQRFYE 449 (464)
Q Consensus 418 ~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~ 449 (464)
.++++ |++.+++|+++++++++....+++++
T Consensus 316 ~~ll~-~~~~~~~~~~~~~~~~~~~~~~~i~~ 346 (348)
T TIGR01133 316 LKLLL-DPANLEAMAEAARKLAKPDAAKRIAE 346 (348)
T ss_pred HHHHc-CHHHHHHHHHHHHhcCCccHHHHHHh
Confidence 99999 99999999999988776666666554
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-25 Score=218.16 Aligned_cols=284 Identities=19% Similarity=0.140 Sum_probs=202.8
Q ss_pred hhcCC-cEEEecccccccch--hhh-ccCceEEEEeeCCcchhhhhhcccccccccCCCcccccchhhhHHHHHHHHHHH
Q 012436 137 CKFTP-LYYFDTSGYAFTYP--LAR-IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFS 212 (464)
Q Consensus 137 ~~~~~-Dvv~~~~~~~~~~~--~~~-~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (464)
+..++ |+|..|..+...+| +.+ ....++.+++|-|....++.+.+. ....
T Consensus 123 ~~~~~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlHipfP~~e~f~~lp-----------------------~r~~--- 176 (456)
T TIGR02400 123 PLLQPGDIVWVHDYHLMLLPAMLRELGVQNKIGFFLHIPFPSSEIYRTLP-----------------------WRRE--- 176 (456)
T ss_pred HhCCCCCEEEEecchhhHHHHHHHhhCCCCeEEEEEeCCCCChHHHhhCC-----------------------cHHH---
Confidence 33444 68877777777766 333 456788899997765444432221 0001
Q ss_pred HHHHHHhhcCCEEEEcCHHHHHHHHHHh----------------CCCCCeEEecCCCCCCCCccCCCCC-----------
Q 012436 213 WMYGLVGSCADLAMVNSSWTQSHIEKLW----------------GIPDRIKRVYPPCDTSGLQVLPLER----------- 265 (464)
Q Consensus 213 ~~~~~~~~~ad~vi~~S~~~~~~~~~~~----------------~~~~~i~~i~~~~d~~~~~~~~~~~----------- 265 (464)
--..+-.+|.|-..+...++.+.... |...++.++|+|+|++.|.+.....
T Consensus 177 --il~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~~~~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~ 254 (456)
T TIGR02400 177 --LLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPNGVESGGRTVRVGAFPIGIDVDRFAEQAKKPSVQKRIAELRE 254 (456)
T ss_pred --HHHHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCCceEECCcEEEEEEecCcCCHHHHHHHhcChhHHHHHHHHHH
Confidence 12334789999999998887775522 2245678899999998875322111
Q ss_pred -CCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhc-----------C
Q 012436 266 -STEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIEL-----------K 333 (464)
Q Consensus 266 -~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~-----------~ 333 (464)
-.++++|+++||+.+.||++.+++|++++.++.++...++.|+++|.....+. ...+++++.++++ +
T Consensus 255 ~~~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~rg~~-~~~~~l~~~i~~lv~~in~~~~~~~ 333 (456)
T TIGR02400 255 SLKGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSRGDV-PEYQQLRRQVEELVGRINGRFGTLD 333 (456)
T ss_pred HcCCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCccCc-hHHHHHHHHHHHHHHHHHhccCCCC
Confidence 13567899999999999999999999998877621111356877764221111 1223344444332 1
Q ss_pred CCCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCc----EEEeCCCCCccceecccCCccceeecC-
Q 012436 334 VDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAI----PIAHNSAGPKMDIVLEEDGQQTGFLAQ- 408 (464)
Q Consensus 334 l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~P----vI~~~~~~~~~~~v~~~~~~~~g~~~~- 408 (464)
..+.+.+.|.++.+++..+|+.||++++||..||+|++++||||||+| +|+|+.+|..++ + + +|++++
T Consensus 334 ~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~-l-----~-~gllVnP 406 (456)
T TIGR02400 334 WTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQE-L-----N-GALLVNP 406 (456)
T ss_pred CccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCCCCceEEEeCCCCChHH-h-----C-CcEEECC
Confidence 122344567889999999999999999999999999999999999999 999998887443 3 2 577775
Q ss_pred -CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q 012436 409 -NAEEYADAIVKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIR 456 (464)
Q Consensus 409 -~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 456 (464)
|+++++++|.++++|++++++++.+..++.+.++|+..+++++++.+.
T Consensus 407 ~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 407 YDIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRWREDFLSDLN 455 (456)
T ss_pred CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhh
Confidence 999999999999997788899999999999988999999999887553
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.9e-26 Score=224.46 Aligned_cols=281 Identities=18% Similarity=0.140 Sum_probs=200.2
Q ss_pred CCcEEEecccccccch--hhh-ccCceEEEEeeCCcchhhhhhcccccccccCCCcccccchhhhHHHHHHHHHHHHHHH
Q 012436 140 TPLYYFDTSGYAFTYP--LAR-IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYG 216 (464)
Q Consensus 140 ~~Dvv~~~~~~~~~~~--~~~-~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (464)
+.|+|+.+..+...++ +.+ ..+.|+++++|-|....+...-+. ... .+.+
T Consensus 131 ~~d~iwihDyhl~llp~~lr~~~~~~~i~~f~HipfP~~e~~~~lp-----------------------~~~----~ll~ 183 (460)
T cd03788 131 PGDLVWVHDYHLLLLPQMLRERGPDARIGFFLHIPFPSSEIFRCLP-----------------------WRE----ELLR 183 (460)
T ss_pred CCCEEEEeChhhhHHHHHHHhhCCCCeEEEEEeCCCCChHHHhhCC-----------------------ChH----HHHH
Confidence 4578887777666666 322 456899999996654333321111 000 1112
Q ss_pred HHhhcCCEEEEcCHHHHHHHHHHh-----------------CCCCCeEEecCCCCCCCCccCCCC------------CCC
Q 012436 217 LVGSCADLAMVNSSWTQSHIEKLW-----------------GIPDRIKRVYPPCDTSGLQVLPLE------------RST 267 (464)
Q Consensus 217 ~~~~~ad~vi~~S~~~~~~~~~~~-----------------~~~~~i~~i~~~~d~~~~~~~~~~------------~~~ 267 (464)
.+..+|.+...+....+.+.+.. +...++.++|+|+|.+.|.+.... ..+
T Consensus 184 -~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~~~i~~~g~~~~i~vip~GID~~~f~~~~~~~~~~~~~~~~~~~~~ 262 (460)
T cd03788 184 -GLLGADLIGFQTERYARNFLSCCSRLLGLEVTDDGGVEYGGRRVRVGAFPIGIDPDAFRKLAASPEVQERAAELRERLG 262 (460)
T ss_pred -HHhcCCEEEECCHHHHHHHHHHHHHHcCCcccCCceEEECCEEEEEEEEeCeEcHHHHHHHhcCchhHHHHHHHHHhcC
Confidence 23458888888866554444321 223568899999998877532111 124
Q ss_pred CCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCC---CccHHHHHHHHHHHHhcCC-------CCc
Q 012436 268 EYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRN---KSDEERLQSLKDKSIELKV-------DGN 337 (464)
Q Consensus 268 ~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~---~~~~~~~~~l~~~~~~~~l-------~~~ 337 (464)
++++|+++||+.+.||++.+++|++.+.++.++...+++|+++|.+.. .+..++.+++++++.+++. .+.
T Consensus 263 ~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v 342 (460)
T cd03788 263 GRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPV 342 (460)
T ss_pred CCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHHHhccCCCCceeE
Confidence 568999999999999999999999998877621111367888876432 2223455666666555432 223
Q ss_pred EEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCc----EEEeCCCCCccceecccCCccceeecC--CHH
Q 012436 338 VEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAI----PIAHNSAGPKMDIVLEEDGQQTGFLAQ--NAE 411 (464)
Q Consensus 338 v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~P----vI~~~~~~~~~~~v~~~~~~~~g~~~~--~~~ 411 (464)
+.+.|.++.+++.++|+.||++++||..||+|++++|||+||+| ||+|+.+|.. +. +.+|++++ |++
T Consensus 343 ~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~-~~------~~~g~lv~p~d~~ 415 (460)
T cd03788 343 RYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAA-EE------LSGALLVNPYDID 415 (460)
T ss_pred EEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEEEeccccch-hh------cCCCEEECCCCHH
Confidence 34568889999999999999999999999999999999999999 9999888773 33 25688875 999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q 012436 412 EYADAIVKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAI 455 (464)
Q Consensus 412 ~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 455 (464)
+++++|.+++++++++++.+++++++.+++|+++.+++++++.+
T Consensus 416 ~la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~~~~w~~~~l~~l 459 (460)
T cd03788 416 EVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANSFLDDL 459 (460)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHhh
Confidence 99999999999556788888888998888999999999987653
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-24 Score=207.91 Aligned_cols=310 Identities=14% Similarity=0.092 Sum_probs=194.1
Q ss_pred cCCcEEEecccccccch--hh-hccCceEEEEeeCCcchhhhhhcccccccccCCCcccccchhhhHHHHHHHHHHHHHH
Q 012436 139 FTPLYYFDTSGYAFTYP--LA-RIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMY 215 (464)
Q Consensus 139 ~~~Dvv~~~~~~~~~~~--~~-~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (464)
.++|++|+|....+... +. +..++|.|+|.|.......+..- ..+.|++-.. ..+........-.-...+|
T Consensus 147 ~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtHAT~~GR~l~~g---~~~~y~~l~~---~~~d~eA~~~~I~~r~~iE 220 (590)
T cd03793 147 EPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTHATLLGRYLCAG---NVDFYNNLDY---FDVDKEAGKRGIYHRYCIE 220 (590)
T ss_pred CCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEecccccccccccC---Ccccchhhhh---cchhhhhhcccchHHHHHH
Confidence 47999998877665433 33 25788999999944322211100 0111111000 0000000011112223478
Q ss_pred HHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCCC------------------------CCCCCCcE
Q 012436 216 GLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL------------------------ERSTEYPA 271 (464)
Q Consensus 216 ~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~~------------------------~~~~~~~~ 271 (464)
+.+...||.++++|+.+++++...++.+... |+|||+|.+.|..... ....++..
T Consensus 221 ~~aa~~Ad~fttVS~it~~E~~~Ll~~~pd~-ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~~~~~~d~tl 299 (590)
T cd03793 221 RAAAHCAHVFTTVSEITAYEAEHLLKRKPDV-VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYGHYDFDLDKTL 299 (590)
T ss_pred HHHHhhCCEEEECChHHHHHHHHHhCCCCCE-EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHHHhhhcCCCCCCeE
Confidence 8999999999999999999999999885555 8999999988764321 11134456
Q ss_pred EEE-EeccCC-CCChHHHHHHHHHHHHHhcCCCCCc---EEEEEcCCCCCc------cHHHHHHHH--------------
Q 012436 272 IIS-VAQFRP-EKAHPLQLEAFSVALRKLDADLPRP---RLQFVGSCRNKS------DEERLQSLK-------------- 326 (464)
Q Consensus 272 i~~-~G~~~~-~K~~~~ll~a~~~l~~~~~~~~p~~---~l~i~G~~~~~~------~~~~~~~l~-------------- 326 (464)
++| +||++. .||++.+|+|+.++....+...++. .|+++=.....- .+...++++
T Consensus 300 i~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~~~~ 379 (590)
T cd03793 300 YFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKIGKRL 379 (590)
T ss_pred EEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHhhhhh
Confidence 666 799988 9999999999999877543322222 333333221100 001111111
Q ss_pred -----------------------------------------------------HHHHhcCCC----Cc--EEEccC-CC-
Q 012436 327 -----------------------------------------------------DKSIELKVD----GN--VEFYKN-LL- 345 (464)
Q Consensus 327 -----------------------------------------------------~~~~~~~l~----~~--v~~~g~-~~- 345 (464)
..+++.++. ++ |.|++. ++
T Consensus 380 ~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~~L~~ 459 (590)
T cd03793 380 FEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPEFLSS 459 (590)
T ss_pred hhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEcccccCC
Confidence 112222222 22 344431 11
Q ss_pred -----hhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCc---cceecccCCc-ccee-ecC-------
Q 012436 346 -----YRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPK---MDIVLEEDGQ-QTGF-LAQ------- 408 (464)
Q Consensus 346 -----~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~---~~~v~~~~~~-~~g~-~~~------- 408 (464)
..+..++|+.||++++||.+|+||++++|||+||+|||+|+.+|.. .|++.+ + ..|+ +.+
T Consensus 460 ~~~~~g~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~E~v~~---~~~~gi~V~~r~~~~~~ 536 (590)
T cd03793 460 TNPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHIED---PESYGIYIVDRRFKSPD 536 (590)
T ss_pred CCCcCCcchHHHhhhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhHHHhcc---CCCceEEEecCCccchH
Confidence 2468888999999999999999999999999999999999998772 233332 2 3454 431
Q ss_pred -CHHHHHHHHHHHHcCCHHHHHHHHHHHH--HHHHccCHHHHHHHHHHHHHHHHh
Q 012436 409 -NAEEYADAIVKIISMPETERLEMAAAAR--RRAARFSEQRFYEDFKAAIRPILC 460 (464)
Q Consensus 409 -~~~~la~~i~~l~~~~~~~~~~~~~~~~--~~~~~~s~~~~~~~~~~~~~~~~~ 460 (464)
++++++++|.++++ . +.++.+.++++ +..+.|+|+++++.|.+.++-+++
T Consensus 537 e~v~~La~~m~~~~~-~-~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~Al~ 589 (590)
T cd03793 537 ESVQQLTQYMYEFCQ-L-SRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQLALS 589 (590)
T ss_pred HHHHHHHHHHHHHhC-C-cHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhh
Confidence 67888999999886 4 34555555544 555899999999999999987764
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2e-24 Score=206.76 Aligned_cols=397 Identities=16% Similarity=0.092 Sum_probs=255.7
Q ss_pred ceEEEecCCCCC---CCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHh--hcCcccC--C---------
Q 012436 35 TSVAFFHPNTND---GGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVD--RFGVELL--H--------- 98 (464)
Q Consensus 35 mkI~~~~~~~~~---~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~--------- 98 (464)
|||+++.....+ .||-.-++..+.++|.+.| ++|.++.+.+.....+..+..+. .+++... .
T Consensus 1 M~Il~v~~E~~p~vK~GGLaDv~~alpk~L~~~g--~~v~v~lP~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (487)
T COG0297 1 MKILFVASEIFPFVKTGGLADVVGALPKALAKRG--VDVRVLLPSYPKVQKEWRDLLKVVGKFGVLKGGRAQLFIVKEYG 78 (487)
T ss_pred CcceeeeeeecCccccCcHHHHHHHhHHHHHhcC--CeEEEEcCCchhhhhhhccccceeeEeeeeecccceEEEEEeec
Confidence 788887765544 2899999999999999999 66666666653222222221111 1111000 0
Q ss_pred ---Cceeeeeeccccccc---ccCcceehhhhchhhhHHHHHHhhh----cCCcEEEecccccccch--hhh----ccCc
Q 012436 99 ---PPKVVHLYRRKWIEE---STYPRFTMIGQSFGSVYLSWEALCK----FTPLYYFDTSGYAFTYP--LAR----IFGC 162 (464)
Q Consensus 99 ---~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~----~~~Dvv~~~~~~~~~~~--~~~----~~~~ 162 (464)
++.++.+....+..+ ..+.......++......+...+.. ..|||||++..+....+ ++. ...+
T Consensus 79 ~~~~v~~~lid~~~~f~r~~~~~~~~~d~~~Rf~~F~~a~~~~~~~~~~~~~pDIvH~hDWqt~L~~~~lk~~~~~~~~i 158 (487)
T COG0297 79 KDGGVDLYLIDNPALFKRPDSTLYGYYDNAERFAFFSLAAAELAPLGLISWLPDIVHAHDWQTGLLPAYLKQRYRSGYII 158 (487)
T ss_pred ccCCCcEEEecChhhcCccccccCCCCcHHHHHHHHHHHHHHHhhhcCCCCCCCEEEeecHHHHHHHHHHhhcccccccC
Confidence 011111111111111 0111111111111222233333322 46999999999888877 333 4578
Q ss_pred eEEEEeeCCcchhhhhhcccccccccCCCcccccchhhhHHHHHHH------HHHHHHHHHHhhcCCEEEEcCHHHHHHH
Q 012436 163 RVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYY------TFFSWMYGLVGSCADLAMVNSSWTQSHI 236 (464)
Q Consensus 163 p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ad~vi~~S~~~~~~~ 236 (464)
|.|+|+|+-. |.+........+..-....+. .--..+.+..+..||.|.++|+.-++++
T Consensus 159 ~tVfTIHNl~---------------~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ad~vttVSptYa~Ei 223 (487)
T COG0297 159 PTVFTIHNLA---------------YQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYADAVTTVSPTYAGEI 223 (487)
T ss_pred CeEEEEeece---------------eecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheeccEEEEECHHHHHhh
Confidence 9999999321 111000000000000000000 0001345777899999999999998888
Q ss_pred H-HHhC--------C-CCCeEEecCCCCCCCCccCCCC-------------C---------------CCCCcEEEEEecc
Q 012436 237 E-KLWG--------I-PDRIKRVYPPCDTSGLQVLPLE-------------R---------------STEYPAIISVAQF 278 (464)
Q Consensus 237 ~-~~~~--------~-~~~i~~i~~~~d~~~~~~~~~~-------------~---------------~~~~~~i~~~G~~ 278 (464)
. ..++ . ..++.-|.||+|.+.+.+.... . ..+.+.+.++||+
T Consensus 224 ~t~~~g~gl~g~l~~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~~~~gL~~~~~~pl~~~vsRl 303 (487)
T COG0297 224 YTPEYGEGLEGLLSWRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQERLGLDVDLPGPLFGFVSRL 303 (487)
T ss_pred ccccccccchhhhhhccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHHHHhCCCCCCCCcEEEEeecc
Confidence 6 2221 1 4667889999988766532111 0 1356899999999
Q ss_pred CCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHHHhcCcE
Q 012436 279 RPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVV 358 (464)
Q Consensus 279 ~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~ 358 (464)
...||++.+++++..+.+. .+++++.|.| +. .+.+.+..+++++. .++.+.-..+..-...+++.+|+
T Consensus 304 ~~QKG~dl~~~~i~~~l~~------~~~~vilG~g-d~---~le~~~~~la~~~~--~~~~~~i~~~~~la~~i~agaD~ 371 (487)
T COG0297 304 TAQKGLDLLLEAIDELLEQ------GWQLVLLGTG-DP---ELEEALRALASRHP--GRVLVVIGYDEPLAHLIYAGADV 371 (487)
T ss_pred ccccchhHHHHHHHHHHHh------CceEEEEecC-cH---HHHHHHHHHHHhcC--ceEEEEeeecHHHHHHHHhcCCE
Confidence 9999999999999999886 6899999998 33 55677888888774 36777767778888899999999
Q ss_pred EEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceeccc----CCccceeecC--CHHHHHHHHHHHHcC--CHHH-HH
Q 012436 359 GIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEE----DGQQTGFLAQ--NAEEYADAIVKIISM--PETE-RL 429 (464)
Q Consensus 359 ~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~----~~~~~g~~~~--~~~~la~~i~~l~~~--~~~~-~~ 429 (464)
+++||.+|++|++-++||..|+++|+..+||....++... .+..+|+.+. ++++++.+|.+.+.. ++.. .+
T Consensus 372 ~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~rA~~~y~~~~~~w~ 451 (487)
T COG0297 372 ILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRALVLYRAPPLLWR 451 (487)
T ss_pred EEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEEecCCHHHHHHHHHHHHHHhhCCHHHHH
Confidence 9999999999999999999999999999999954444210 1257888875 999999999887751 3333 55
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHHHHhhc
Q 012436 430 EMAAAARRRAARFSEQRFYEDFKAAIRPILCHA 462 (464)
Q Consensus 430 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 462 (464)
.+..++.. ..|+|+..++++.+.|+.++...
T Consensus 452 ~~~~~~m~--~d~sw~~sa~~y~~lY~~~~~~~ 482 (487)
T COG0297 452 KVQPNAMG--ADFSWDLSAKEYVELYKPLLSKP 482 (487)
T ss_pred HHHHhhcc--cccCchhHHHHHHHHHHHHhccc
Confidence 55555544 68999999999999999987653
|
|
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.3e-25 Score=214.86 Aligned_cols=356 Identities=13% Similarity=0.069 Sum_probs=222.4
Q ss_pred ccceEEEecCCCCCCCCcchhhHHHHHHhhhhCCC-CceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeeccccc
Q 012436 33 RTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPD-LDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWI 111 (464)
Q Consensus 33 ~~mkI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (464)
+.|||++++.+. |||..+.+..+.++|.+.+.+ +++.+...-.. ..+.+.......+...+.....++ +.+.
T Consensus 4 ~~~~vlil~~~~--G~GH~~aA~al~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~Y~~~~~~~p~~y----~~~y 76 (391)
T PRK13608 4 QNKKILIITGSF--GNGHMQVTQSIVNQLNDMNLDHLSVIEHDLFME-AHPILTSICKKWYINSFKYFRNMY----KGFY 76 (391)
T ss_pred CCceEEEEECCC--CchHHHHHHHHHHHHHhhCCCCceEEEeehHHh-cCchHHHHHHHHHHHHHHHhHHHH----HHHH
Confidence 458999998554 688999999999999988753 45443322111 111111111110000000000000 0000
Q ss_pred ccccCcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccchhh--hccCceEEEEeeCCcchhhhhhcccccccccC
Q 012436 112 EESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLA--RIFGCRVICYTHYPTISLDMISRVREGSSMYN 189 (464)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~~~--~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~ 189 (464)
.... ...............+.+.+++.+||+||++...+....+. +..++|++....+-.
T Consensus 77 ~~~~-~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~p~~~~~~l~~~~~~~iP~~~v~td~~----------------- 138 (391)
T PRK13608 77 YSRP-DKLDKCFYKYYGLNKLINLLIKEKPDLILLTFPTPVMSVLTEQFNINIPVATVMTDYR----------------- 138 (391)
T ss_pred HcCc-hhhHHHHHHHHHHHHHHHHHHHhCcCEEEECCcHHHHHHHHHhcCCCCCEEEEeCCCC-----------------
Confidence 0000 00000111112235677789999999999765533221122 245789865333100
Q ss_pred CCcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCC-------
Q 012436 190 NNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLP------- 262 (464)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~------- 262 (464)
. . ..++.+.+|.+++.|+.+++.+.+.+..++++.++.+|++.......+
T Consensus 139 ~-----~------------------~~w~~~~~d~~~v~s~~~~~~l~~~gi~~~ki~v~GiPv~~~f~~~~~~~~~~~~ 195 (391)
T PRK13608 139 L-----H------------------KNWITPYSTRYYVATKETKQDFIDVGIDPSTVKVTGIPIDNKFETPIDQKQWLID 195 (391)
T ss_pred c-----c------------------cccccCCCCEEEECCHHHHHHHHHcCCCHHHEEEECeecChHhcccccHHHHHHH
Confidence 0 0 022347899999999999999987633367888888887643322111
Q ss_pred CCCCC-CCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEc
Q 012436 263 LERST-EYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFY 341 (464)
Q Consensus 263 ~~~~~-~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~ 341 (464)
...++ +..++++.|++...|+++.+++++.+ .. ++++++++++... +..+++++. ++..++|.+.
T Consensus 196 ~~l~~~~~~ilv~~G~lg~~k~~~~li~~~~~---~~----~~~~~vvv~G~~~----~l~~~l~~~---~~~~~~v~~~ 261 (391)
T PRK13608 196 NNLDPDKQTILMSAGAFGVSKGFDTMITDILA---KS----ANAQVVMICGKSK----ELKRSLTAK---FKSNENVLIL 261 (391)
T ss_pred cCCCCCCCEEEEECCCcccchhHHHHHHHHHh---cC----CCceEEEEcCCCH----HHHHHHHHH---hccCCCeEEE
Confidence 01112 33456678999888999999998532 22 4788876654321 122334333 3335689999
Q ss_pred cCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeC-CCCCc---cceecccCCccceeecCCHHHHHHHH
Q 012436 342 KNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHN-SAGPK---MDIVLEEDGQQTGFLAQNAEEYADAI 417 (464)
Q Consensus 342 g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~-~~~~~---~~~v~~~~~~~~g~~~~~~~~la~~i 417 (464)
|++ +++.++|+.||++|.. +.|+++.|||++|+|+|+++ .++.- ..++.+ .+.|+..+|+++++++|
T Consensus 262 G~~--~~~~~~~~~aDl~I~k----~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~---~G~g~~~~~~~~l~~~i 332 (391)
T PRK13608 262 GYT--KHMNEWMASSQLMITK----PGGITISEGLARCIPMIFLNPAPGQELENALYFEE---KGFGKIADTPEEAIKIV 332 (391)
T ss_pred ecc--chHHHHHHhhhEEEeC----CchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHh---CCcEEEeCCHHHHHHHH
Confidence 998 7899999999999963 46889999999999999986 33320 112234 56777778999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHh
Q 012436 418 VKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIRPILC 460 (464)
Q Consensus 418 ~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 460 (464)
.++++ |++.+++|++++++..+.++++.+++.+.+++.....
T Consensus 333 ~~ll~-~~~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~~~ 374 (391)
T PRK13608 333 ASLTN-GNEQLTNMISTMEQDKIKYATQTICRDLLDLIGHSSQ 374 (391)
T ss_pred HHHhc-CHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhhhhh
Confidence 99999 9999999999999988889999999999998876544
|
|
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.5e-25 Score=212.04 Aligned_cols=267 Identities=13% Similarity=0.050 Sum_probs=188.0
Q ss_pred HHHHHHhhhcCCcEEEecccccccch---hhh-----ccCceEEEEeeCCcchhhhhhcccccccccCCCcccccchhhh
Q 012436 130 YLSWEALCKFTPLYYFDTSGYAFTYP---LAR-----IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLS 201 (464)
Q Consensus 130 ~~~~~~l~~~~~Dvv~~~~~~~~~~~---~~~-----~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (464)
.++.+++++.+||+||++..+....+ +.+ ..++|++..+..-. ..
T Consensus 90 ~~l~~~i~~~~pDvIi~thp~~~~~~~~~l~~~~~~~~~~~p~~~~~tD~~------~~--------------------- 142 (382)
T PLN02605 90 REVAKGLMKYKPDIIVSVHPLMQHVPLRVLRWQGKELGKKIPFTTVVTDLG------TC--------------------- 142 (382)
T ss_pred HHHHHHHHhcCcCEEEEeCcCcccCHHHHHHHHhhccCCCCCEEEEECCCC------Cc---------------------
Confidence 45567788999999998655433222 222 24788877655110 00
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCC--------CCCCCCCcEEE
Q 012436 202 QCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLP--------LERSTEYPAII 273 (464)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~--------~~~~~~~~~i~ 273 (464)
...+..+.+|.++++|+..++.+.+.+-.++++.++++|++.+...... ...+++.++++
T Consensus 143 ------------~~~w~~~~~d~~~~~s~~~~~~l~~~g~~~~ki~v~g~~v~~~f~~~~~~~~~~r~~~gl~~~~~~il 210 (382)
T PLN02605 143 ------------HPTWFHKGVTRCFCPSEEVAKRALKRGLEPSQIRVYGLPIRPSFARAVRPKDELRRELGMDEDLPAVL 210 (382)
T ss_pred ------------CcccccCCCCEEEECCHHHHHHHHHcCCCHHHEEEECcccCHhhccCCCCHHHHHHHcCCCCCCcEEE
Confidence 0123348999999999999999988743367899999998765433111 11124568999
Q ss_pred EEeccCCCCChHHHHHHHHHHHHHhcCCCCCcE-EEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHH
Q 012436 274 SVAQFRPEKAHPLQLEAFSVALRKLDADLPRPR-LQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKL 352 (464)
Q Consensus 274 ~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~-l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~ 352 (464)
++|+....|++..+++++..+........++.+ ++++|.+. ...+++++. ....+|+++|++ +++.++
T Consensus 211 ~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~-----~~~~~L~~~----~~~~~v~~~G~~--~~~~~l 279 (382)
T PLN02605 211 LMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNK-----KLQSKLESR----DWKIPVKVRGFV--TNMEEW 279 (382)
T ss_pred EECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCH-----HHHHHHHhh----cccCCeEEEecc--ccHHHH
Confidence 999999999999999999765311000003565 56677552 222444433 223579999999 689999
Q ss_pred HhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCC-----CCccceecccCCccceeecCCHHHHHHHHHHHHcCC-HH
Q 012436 353 LGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSA-----GPKMDIVLEEDGQQTGFLAQNAEEYADAIVKIISMP-ET 426 (464)
Q Consensus 353 l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~-----~~~~~~v~~~~~~~~g~~~~~~~~la~~i~~l~~~~-~~ 426 (464)
|+.||++|.++ .|++++|||+||+|+|+++.. +.. +.+.+ ++.|+...|+++++++|.++++ | ++
T Consensus 280 ~~aaDv~V~~~----g~~ti~EAma~g~PvI~~~~~pgqe~gn~-~~i~~---~g~g~~~~~~~~la~~i~~ll~-~~~~ 350 (382)
T PLN02605 280 MGACDCIITKA----GPGTIAEALIRGLPIILNGYIPGQEEGNV-PYVVD---NGFGAFSESPKEIARIVAEWFG-DKSD 350 (382)
T ss_pred HHhCCEEEECC----CcchHHHHHHcCCCEEEecCCCccchhhH-HHHHh---CCceeecCCHHHHHHHHHHHHc-CCHH
Confidence 99999999864 478999999999999999842 221 23344 5678777899999999999998 8 99
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q 012436 427 ERLEMAAAARRRAARFSEQRFYEDFKAAI 455 (464)
Q Consensus 427 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 455 (464)
.+++|++++++.....+.+.+++.+.+..
T Consensus 351 ~~~~m~~~~~~~~~~~a~~~i~~~l~~~~ 379 (382)
T PLN02605 351 ELEAMSENALKLARPEAVFDIVHDLHELV 379 (382)
T ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHh
Confidence 99999999998887788888887776554
|
|
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.6e-24 Score=205.79 Aligned_cols=213 Identities=18% Similarity=0.088 Sum_probs=158.6
Q ss_pred HHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCCCC-------CCCCCcEEEEEeccCCCCChH
Q 012436 213 WMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLE-------RSTEYPAIISVAQFRPEKAHP 285 (464)
Q Consensus 213 ~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~~~-------~~~~~~~i~~~G~~~~~K~~~ 285 (464)
..++.+++.||.|+++|+..++.+.+. + .++.+++||+|.+.|...... ...++++++|+|++.+.++++
T Consensus 145 ~~e~~~~~~ad~vi~~S~~l~~~~~~~-~--~~i~~i~ngvd~~~f~~~~~~~~~~~~~~~~~~~~i~y~G~l~~~~d~~ 221 (373)
T cd04950 145 EAERRLLKRADLVFTTSPSLYEAKRRL-N--PNVVLVPNGVDYEHFAAARDPPPPPADLAALPRPVIGYYGAIAEWLDLE 221 (373)
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHhhC-C--CCEEEcccccCHHHhhcccccCCChhHHhcCCCCEEEEEeccccccCHH
Confidence 567888899999999999999988775 3 689999999998877643221 124568999999999988877
Q ss_pred HHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHHHhcCcEEEEcCCC
Q 012436 286 LQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMID 365 (464)
Q Consensus 286 ~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~ 365 (464)
.+.++++ .. |+++|+++|.+.... ....+ ...+||+++|++|++++..+|+.+|++++|+..
T Consensus 222 ll~~la~----~~----p~~~~vliG~~~~~~------~~~~~----~~~~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~ 283 (373)
T cd04950 222 LLEALAK----AR----PDWSFVLIGPVDVSI------DPSAL----LRLPNVHYLGPKPYKELPAYLAGFDVAILPFRL 283 (373)
T ss_pred HHHHHHH----HC----CCCEEEEECCCcCcc------ChhHh----ccCCCEEEeCCCCHHHHHHHHHhCCEEecCCcc
Confidence 6554443 22 699999999873221 11111 113689999999999999999999999999752
Q ss_pred -----CCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC-CHHHHHHHHHHHHcCCH-HHHHHHHHHHHHH
Q 012436 366 -----EHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ-NAEEYADAIVKIISMPE-TERLEMAAAARRR 438 (464)
Q Consensus 366 -----e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~-~~~~la~~i~~l~~~~~-~~~~~~~~~~~~~ 438 (464)
+++|++++||||||+|||+|+.+. +... .+.+++.+ |+++++++|.+++. ++ ....+ .+++.
T Consensus 284 ~~~~~~~~P~Kl~EylA~G~PVVat~~~~----~~~~---~~~~~~~~~d~~~~~~ai~~~l~-~~~~~~~~---~~~~~ 352 (373)
T cd04950 284 NELTRATSPLKLFEYLAAGKPVVATPLPE----VRRY---EDEVVLIADDPEEFVAAIEKALL-EDGPARER---RRLRL 352 (373)
T ss_pred chhhhcCCcchHHHHhccCCCEEecCcHH----HHhh---cCcEEEeCCCHHHHHHHHHHHHh-cCCchHHH---HHHHH
Confidence 367999999999999999998553 3344 34455554 89999999999765 33 22222 22234
Q ss_pred HHccCHHHHHHHHHHHHHH
Q 012436 439 AARFSEQRFYEDFKAAIRP 457 (464)
Q Consensus 439 ~~~~s~~~~~~~~~~~~~~ 457 (464)
++.+||+..++++.+.+.+
T Consensus 353 ~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 353 AAQNSWDARAAEMLEALQE 371 (373)
T ss_pred HHHCCHHHHHHHHHHHHHh
Confidence 5899999999999976654
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.4e-23 Score=214.14 Aligned_cols=290 Identities=17% Similarity=0.119 Sum_probs=206.7
Q ss_pred hhhcCC-cEEEecccccccch--hhh-ccCceEEEEeeCCcchhhhhhcccccccccCCCcccccchhhhHHHHHHHHHH
Q 012436 136 LCKFTP-LYYFDTSGYAFTYP--LAR-IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFF 211 (464)
Q Consensus 136 l~~~~~-Dvv~~~~~~~~~~~--~~~-~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (464)
.+..++ |+|..|..+...+| +.+ ..+.++.+++|-|..+.++.+.+..+ ..+
T Consensus 142 ~~~~~~~d~vWvhDYhL~llp~~lR~~~~~~~igfFlHiPFPs~e~fr~lp~r-----------------------~~i- 197 (797)
T PLN03063 142 KENYEEGDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTPFPSSEIYKTLPSR-----------------------SEL- 197 (797)
T ss_pred HHhcCCCCEEEEecchhhhHHHHHHHhCCCCcEEEEecCCCCCHHHHhhCCCH-----------------------HHH-
Confidence 333454 67776777777766 333 67889999999777555543332200 011
Q ss_pred HHHHHHHhhcCCEEEEcCHHHHHHHHHH----------------hCCCCCeEEecCCCCCCCCccCCCC-----------
Q 012436 212 SWMYGLVGSCADLAMVNSSWTQSHIEKL----------------WGIPDRIKRVYPPCDTSGLQVLPLE----------- 264 (464)
Q Consensus 212 ~~~~~~~~~~ad~vi~~S~~~~~~~~~~----------------~~~~~~i~~i~~~~d~~~~~~~~~~----------- 264 (464)
-..+-.||.|-+.+....+.+.+. .|...++.++|+|+|.+.|.+....
T Consensus 198 ----l~gll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~~i~~~gr~~~I~viP~GID~~~f~~~~~~~~~~~~~~~lr 273 (797)
T PLN03063 198 ----LRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHEGVVDQGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELK 273 (797)
T ss_pred ----HHHHhcCCEEEeCCHHHHHHHHHHHHHHhCccccCCceEECCeEEEEEEEecccCHHHHHHHhcChhHHHHHHHHH
Confidence 122356777777777776666541 1223568899999998876532111
Q ss_pred -CCCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcC--CCC-----
Q 012436 265 -RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELK--VDG----- 336 (464)
Q Consensus 265 -~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~--l~~----- 336 (464)
...++++|+++||+++.||++.+++|++.+.+..++...++.|+.++. +.+.+....+++++.++++. +..
T Consensus 274 ~~~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~-psr~~~~~y~~l~~~v~~l~g~In~~~g~~ 352 (797)
T PLN03063 274 RFFAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAV-PTRNDVPEYQKLKSQVHELVGRINGRFGSV 352 (797)
T ss_pred HhcCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEec-CCCCchHHHHHHHHHHHHHHHHhhcccccC
Confidence 113567899999999999999999999999877631111234554443 22222223355666665553 221
Q ss_pred ----cEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCc----EEEeCCCCCccceecccCCccceeecC
Q 012436 337 ----NVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAI----PIAHNSAGPKMDIVLEEDGQQTGFLAQ 408 (464)
Q Consensus 337 ----~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~P----vI~~~~~~~~~~~v~~~~~~~~g~~~~ 408 (464)
-+.+.+.++.+++..+|+.||++++||..||+|++++||||||+| +|+|..+|.. +.+ +.+|++++
T Consensus 353 ~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G~~-~~l-----~~~allVn 426 (797)
T PLN03063 353 SSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAG-QSL-----GAGALLVN 426 (797)
T ss_pred CCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHheeecCCCCCEEeeCCcCch-hhh-----cCCeEEEC
Confidence 123446889999999999999999999999999999999999999 9999988874 443 35688875
Q ss_pred --CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHh
Q 012436 409 --NAEEYADAIVKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIRPILC 460 (464)
Q Consensus 409 --~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 460 (464)
|+++++++|.++++|+++++++..+..++++.+++|..+++.+++.+++...
T Consensus 427 P~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~fl~~l~~~~~ 480 (797)
T PLN03063 427 PWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTHSAQKWADDFMSELNDIIV 480 (797)
T ss_pred CCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhh
Confidence 9999999999999988899999999999999999999999999999887754
|
|
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.4e-24 Score=182.53 Aligned_cols=158 Identities=29% Similarity=0.400 Sum_probs=140.8
Q ss_pred CCCCcEEEEEeccCCCCChHHHHHHHHHHHHH-hcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCC
Q 012436 266 STEYPAIISVAQFRPEKAHPLQLEAFSVALRK-LDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNL 344 (464)
Q Consensus 266 ~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~-~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~ 344 (464)
..++++|+++|++.+.||++.+++++..+.++ . +++.++|+|.+. +...++..++.+++.+++.++|.+
T Consensus 12 ~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~----~~~~l~i~G~~~------~~~~~~~~~~~~~~~~~i~~~~~~ 81 (172)
T PF00534_consen 12 PDKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKN----PNYKLVIVGDGE------YKKELKNLIEKLNLKENIIFLGYV 81 (172)
T ss_dssp -TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHH----TTEEEEEESHCC------HHHHHHHHHHHTTCGTTEEEEESH
T ss_pred CCCCeEEEEEecCccccCHHHHHHHHHHHHhhcC----CCeEEEEEcccc------cccccccccccccccccccccccc
Confidence 46678999999999999999999999999864 4 599999999553 346788888999998999999999
Q ss_pred ChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC--CHHHHHHHHHHHHc
Q 012436 345 LYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ--NAEEYADAIVKIIS 422 (464)
Q Consensus 345 ~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~--~~~~la~~i~~l~~ 422 (464)
+.+++.++|+.||++++||..|++|.+++|||++|+|||+++.++. .+++.+ +.+|++++ |+++++++|.++++
T Consensus 82 ~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~-~e~~~~---~~~g~~~~~~~~~~l~~~i~~~l~ 157 (172)
T PF00534_consen 82 PDDELDELYKSSDIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGN-NEIIND---GVNGFLFDPNDIEELADAIEKLLN 157 (172)
T ss_dssp SHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHH-HHHSGT---TTSEEEESTTSHHHHHHHHHHHHH
T ss_pred cccccccccccceeccccccccccccccccccccccceeeccccCC-ceeecc---ccceEEeCCCCHHHHHHHHHHHHC
Confidence 9999999999999999999999999999999999999999998887 788888 88999986 89999999999999
Q ss_pred CCHHHHHHHHHHHHHH
Q 012436 423 MPETERLEMAAAARRR 438 (464)
Q Consensus 423 ~~~~~~~~~~~~~~~~ 438 (464)
+++.++.++++++++
T Consensus 158 -~~~~~~~l~~~~~~~ 172 (172)
T PF00534_consen 158 -DPELRQKLGKNARER 172 (172)
T ss_dssp -HHHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHhcCC
Confidence 999999999999874
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.9e-22 Score=179.38 Aligned_cols=120 Identities=31% Similarity=0.377 Sum_probs=101.7
Q ss_pred EEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCC-ChhHHHHH
Q 012436 274 SVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNL-LYRDLVKL 352 (464)
Q Consensus 274 ~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~-~~~~~~~~ 352 (464)
|+|++.+.||++.+++++..+.++. |+++++++|.+... ...+..+.+.+..++|.+.|++ +.+++..+
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~----~~~~~~i~G~~~~~------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 178 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERG----PDLKLVIAGDGPER------EYLEELLAALLLLDRVIFLGGLDPEELLALL 178 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhC----CCeEEEEEeCCCCh------HHHHHHHHhcCCcccEEEeCCCCcHHHHHHH
Confidence 9999999999999999999998776 69999999998653 3333335666777899999998 45666666
Q ss_pred HhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeec
Q 012436 353 LGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLA 407 (464)
Q Consensus 353 l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~ 407 (464)
++.||++++||..|++|.+++|||++|+|+|+|+.++. .+++.+ +++|+++
T Consensus 179 ~~~~di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~-~e~i~~---~~~g~~~ 229 (229)
T cd01635 179 LAAADVFVLPSLREGFGLVVLEAMACGLPVIATDVGGP-PEIVED---GLTGLLV 229 (229)
T ss_pred hhcCCEEEecccccCcChHHHHHHhCCCCEEEcCCCCc-ceEEEC---CCceEEC
Confidence 67799999999999999999999999999999999988 677777 7888764
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.5e-21 Score=182.84 Aligned_cols=249 Identities=14% Similarity=0.059 Sum_probs=173.0
Q ss_pred HHhhhcCC-cEEEeccccccc--ch---hhh--ccCceEEEEeeCCcchhhhhhcccccccccCCCcccccchhhhHHHH
Q 012436 134 EALCKFTP-LYYFDTSGYAFT--YP---LAR--IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKI 205 (464)
Q Consensus 134 ~~l~~~~~-Dvv~~~~~~~~~--~~---~~~--~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (464)
+.+...++ |+||.++..... +. +.+ ..++|+|+++|.-. .... ...
T Consensus 57 ~~~~~~~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~------~~~~------------------~~~-- 110 (333)
T PRK09814 57 GILASLKPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIE------PLRF------------------DSN-- 110 (333)
T ss_pred HHHhcCCCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcH------HHhc------------------ccc--
Confidence 34666777 999876653322 11 222 34799999999311 1000 000
Q ss_pred HHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCCCCCCCCCcEEEEEeccCCCCChH
Q 012436 206 VYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHP 285 (464)
Q Consensus 206 ~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~ 285 (464)
......++..++.+|.++++|+.+++.+.+.+....++.++++..+..... ........+.++|+|++....+
T Consensus 111 ---~~~~~~~~~~~~~aD~iI~~S~~~~~~l~~~g~~~~~i~~~~~~~~~~~~~--~~~~~~~~~~i~yaG~l~k~~~-- 183 (333)
T PRK09814 111 ---YYLMKEEIDMLNLADVLIVHSKKMKDRLVEEGLTTDKIIVQGIFDYLNDIE--LVKTPSFQKKINFAGNLEKSPF-- 183 (333)
T ss_pred ---chhhHHHHHHHHhCCEEEECCHHHHHHHHHcCCCcCceEeccccccccccc--ccccccCCceEEEecChhhchH--
Confidence 001245677889999999999999999988632245676665544332111 1112234568999999984321
Q ss_pred HHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHHHhcCcEEEEcCC-
Q 012436 286 LQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMI- 364 (464)
Q Consensus 286 ~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~- 364 (464)
+.... ++++|+++|+|+..+ ...++|+|.|+++.+++.++|+. |+.+.+..
T Consensus 184 --------l~~~~----~~~~l~i~G~g~~~~---------------~~~~~V~f~G~~~~eel~~~l~~-~~gLv~~~~ 235 (333)
T PRK09814 184 --------LKNWS----QGIKLTVFGPNPEDL---------------ENSANISYKGWFDPEELPNELSK-GFGLVWDGD 235 (333)
T ss_pred --------HHhcC----CCCeEEEECCCcccc---------------ccCCCeEEecCCCHHHHHHHHhc-CcCeEEcCC
Confidence 11111 589999999987531 12569999999999999999998 76655432
Q ss_pred ----------CCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecCCHHHHHHHHHHHHcCCHHHHHHHHHH
Q 012436 365 ----------DEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQNAEEYADAIVKIISMPETERLEMAAA 434 (464)
Q Consensus 365 ----------~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~~~~~la~~i~~l~~~~~~~~~~~~~~ 434 (464)
.-++|..+.|+||||+|||+++.++. .+++.+ +.+|+++++.+++++++.++ +++++++|+++
T Consensus 236 ~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~-~~~V~~---~~~G~~v~~~~el~~~l~~~---~~~~~~~m~~n 308 (333)
T PRK09814 236 TNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAI-ADFIVE---NGLGFVVDSLEELPEIIDNI---TEEEYQEMVEN 308 (333)
T ss_pred CCCccchhhhhccchHHHHHHHHCCCCEEECCCccH-HHHHHh---CCceEEeCCHHHHHHHHHhc---CHHHHHHHHHH
Confidence 13678889999999999999998887 799999 89999999999999999885 56788999999
Q ss_pred HHHHHHccCHHHHHHH
Q 012436 435 ARRRAARFSEQRFYED 450 (464)
Q Consensus 435 ~~~~~~~~s~~~~~~~ 450 (464)
+++.++++.-..+.++
T Consensus 309 ~~~~~~~~~~g~~~~~ 324 (333)
T PRK09814 309 VKKISKLLRNGYFTKK 324 (333)
T ss_pred HHHHHHHHhcchhHHH
Confidence 9998876665555554
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.3e-22 Score=207.70 Aligned_cols=289 Identities=19% Similarity=0.181 Sum_probs=200.8
Q ss_pred hhcCC-cEEEecccccccch--hhh-ccCceEEEEeeCCcchhhhhhcccccccccCCCcccccchhhhHHHHHHHHHHH
Q 012436 137 CKFTP-LYYFDTSGYAFTYP--LAR-IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFS 212 (464)
Q Consensus 137 ~~~~~-Dvv~~~~~~~~~~~--~~~-~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (464)
+..++ |+|..|..+...+| +.+ ..+.++.+++|.|....++.+.+.. ...+
T Consensus 129 ~~~~~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlH~pfP~~~~f~~lp~-----------------------~~~l-- 183 (726)
T PRK14501 129 AIARPGDVVWVHDYQLMLLPAMLRERLPDARIGFFLHIPFPSFEVFRLLPW-----------------------REEI-- 183 (726)
T ss_pred HhcCCCCEEEEeCchhhhHHHHHHhhCCCCcEEEEeeCCCCChHHHhhCCC-----------------------hHHH--
Confidence 33444 67776777776666 333 5677899999977755544332220 0001
Q ss_pred HHHHHHhhcCCEEEEcCHHHHHHHHHH----------------hCCCCCeEEecCCCCCCCCccCCCC------------
Q 012436 213 WMYGLVGSCADLAMVNSSWTQSHIEKL----------------WGIPDRIKRVYPPCDTSGLQVLPLE------------ 264 (464)
Q Consensus 213 ~~~~~~~~~ad~vi~~S~~~~~~~~~~----------------~~~~~~i~~i~~~~d~~~~~~~~~~------------ 264 (464)
-..+-.+|.|-..+....+.+.+. .|...++.++|+|+|.+.|.+....
T Consensus 184 ---l~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~~~~~~~gr~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~lr~ 260 (726)
T PRK14501 184 ---LEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELGEIRLGGRIVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQ 260 (726)
T ss_pred ---HHHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCCCeEEECCEEEEEEEEECeEcHHHHHHHhcCchHHHHHHHHHH
Confidence 122366788877777765555432 1223357889999999887632211
Q ss_pred CCCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCC---CccHHHHHHHHHHHHhcC-------C
Q 012436 265 RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRN---KSDEERLQSLKDKSIELK-------V 334 (464)
Q Consensus 265 ~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~---~~~~~~~~~l~~~~~~~~-------l 334 (464)
..+++++|+++||+.+.||+..+++|++.+.+..++...+++|+++|.+.. .+..++.+++++++.+.+ .
T Consensus 261 ~~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~ 340 (726)
T PRK14501 261 DLRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDW 340 (726)
T ss_pred HcCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCc
Confidence 123567999999999999999999999998877632111478988874421 112234444555543322 1
Q ss_pred CCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCC-----cEEEeCCCCCccceecccCCccceeecC-
Q 012436 335 DGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGA-----IPIAHNSAGPKMDIVLEEDGQQTGFLAQ- 408 (464)
Q Consensus 335 ~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~-----PvI~~~~~~~~~~~v~~~~~~~~g~~~~- 408 (464)
.+.+.+.|+++.+++..+|+.||++++||..||+|++++|||+||+ ||++...|+. .++. .|++++
T Consensus 341 ~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~-~~l~-------~~llv~P 412 (726)
T PRK14501 341 TPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAA-AELA-------EALLVNP 412 (726)
T ss_pred ceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcCCCCceEEEecccchh-HHhC-------cCeEECC
Confidence 2345677999999999999999999999999999999999999955 5555555554 5542 367775
Q ss_pred -CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhh
Q 012436 409 -NAEEYADAIVKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIRPILCH 461 (464)
Q Consensus 409 -~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 461 (464)
|+++++++|.++++|+++++.+..+++++.+.+|||+.+++++++.++++..+
T Consensus 413 ~d~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~~~~~~~w~~~~l~~l~~~~~~ 466 (726)
T PRK14501 413 NDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVHKWASDFLDELREAAEK 466 (726)
T ss_pred CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 99999999999998555666667778888888999999999999999887543
|
|
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.9e-20 Score=178.30 Aligned_cols=287 Identities=14% Similarity=0.108 Sum_probs=211.8
Q ss_pred hhhcCC-cEEEecccccccch--hhh-ccCceEEEEeeCCcchhhhhhcccccccccCCCcccccchhhhHHHHHHHHHH
Q 012436 136 LCKFTP-LYYFDTSGYAFTYP--LAR-IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFF 211 (464)
Q Consensus 136 l~~~~~-Dvv~~~~~~~~~~~--~~~-~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (464)
.+..++ |+|..|..+...+| +.+ ..+.++-+++|-|..+.++.+.+..+ ..+
T Consensus 127 ~~~~~~~d~vWVhDYhL~llp~~LR~~~~~~~IgfFlHiPFPs~eifr~LP~r-----------------------~~l- 182 (487)
T TIGR02398 127 CLEAAEGATVWVHDYNLWLVPGYIRQLRPDLKIAFFHHTPFPSADVFNILPWR-----------------------EQI- 182 (487)
T ss_pred HHhcCCCCEEEEecchhhHHHHHHHHhCCCCeEEEEeeCCCCChHHHhhCCch-----------------------HHH-
Confidence 334444 57766676666666 333 56678899999777555553332200 011
Q ss_pred HHHHHHHhhcCCEEEEcCHHHHHHHHHHh----C---------------------------------CCCCeEEecCCCC
Q 012436 212 SWMYGLVGSCADLAMVNSSWTQSHIEKLW----G---------------------------------IPDRIKRVYPPCD 254 (464)
Q Consensus 212 ~~~~~~~~~~ad~vi~~S~~~~~~~~~~~----~---------------------------------~~~~i~~i~~~~d 254 (464)
-..+-.+|.|=..+...++.+.+.. + ..-++.++|.|+|
T Consensus 183 ----l~glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiGID 258 (487)
T TIGR02398 183 ----IGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTD 258 (487)
T ss_pred ----HHHHhcCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccccccccccceeECCEEEEEEEEECEec
Confidence 1223677888888877776665421 1 1223678999999
Q ss_pred CCCCccCCCCC------------CCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCC---ccH
Q 012436 255 TSGLQVLPLER------------STEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNK---SDE 319 (464)
Q Consensus 255 ~~~~~~~~~~~------------~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~---~~~ 319 (464)
++.|.+..... -.++++|++++|++..||+...++|++++.+++++...+++|+++|.++.. +..
T Consensus 259 ~~~f~~~~~~~~~~~~~~~lr~~~~~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv~Lvqi~~psr~~v~~y~ 338 (487)
T TIGR02398 259 PERIRSALAAASIREMMERIRSELAGVKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACVPAASGMTIYD 338 (487)
T ss_pred HHHHHHHhcCchHHHHHHHHHHHcCCceEEEEecccccccCHHHHHHHHHHHHHhCccccCceEEEEEeCCCcccchHHH
Confidence 98875332111 135689999999999999999999999998887433335799999876432 233
Q ss_pred HHHHHHHHHHHhc-------CCCCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCC----cEEEeCCC
Q 012436 320 ERLQSLKDKSIEL-------KVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGA----IPIAHNSA 388 (464)
Q Consensus 320 ~~~~~l~~~~~~~-------~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~----PvI~~~~~ 388 (464)
++.+++++++.+. +..+.+.+.+.+|.+++..+|+.||+++.||..||++++..|+++|+. |+|.|..+
T Consensus 339 ~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefa 418 (487)
T TIGR02398 339 ELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFA 418 (487)
T ss_pred HHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECccccccCcchhhHHhhhcCCCCCEEEeccc
Confidence 4566777777664 556678889999999999999999999999999999999999999988 99999999
Q ss_pred CCccceecccCCccceeecC--CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Q 012436 389 GPKMDIVLEEDGQQTGFLAQ--NAEEYADAIVKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIRP 457 (464)
Q Consensus 389 ~~~~~~v~~~~~~~~g~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 457 (464)
|...++ ..+++++ |++++|++|.++++|..+++++..+..++.+.+++....++.+++.+..
T Consensus 419 Gaa~~l-------~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~~d~~~W~~~fl~~l~~ 482 (487)
T TIGR02398 419 GAAVEL-------KGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYYDVQRWADEFLAAVSP 482 (487)
T ss_pred cchhhc-------CCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhhh
Confidence 884322 3466665 9999999999999988888888888888888999999999998876654
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.4e-20 Score=179.13 Aligned_cols=329 Identities=15% Similarity=0.077 Sum_probs=200.6
Q ss_pred ceEEEecCCCCCCCCcchhhHHHHHHhhhh-CCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeeccccccc
Q 012436 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEE-SPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEE 113 (464)
Q Consensus 35 mkI~~~~~~~~~~GG~~~~~~~l~~~L~~~-g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (464)
|||+++...-+.. ..+.-++++|.+. +.++. ++.|+.+ ....+...+.|++.. . +.+....
T Consensus 1 ~~i~~~~gtr~~~----~~~~p~~~~l~~~~~~~~~-~~~tg~h----~~~~~~~~~~~~i~~--~---~~~~~~~---- 62 (365)
T TIGR00236 1 LKVSIVLGTRPEA----IKMAPLIRALKKYPEIDSY-VIVTAQH----REMLDQVLDLFHLPP--D---YDLNIMS---- 62 (365)
T ss_pred CeEEEEEecCHHH----HHHHHHHHHHhhCCCCCEE-EEEeCCC----HHHHHHHHHhcCCCC--C---eeeecCC----
Confidence 6888876655333 2445677888875 32333 3344433 234444444466531 1 1111110
Q ss_pred ccCcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccch---hhhccCceEEEEeeCCcchhhhhhcccccccccCC
Q 012436 114 STYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP---LARIFGCRVICYTHYPTISLDMISRVREGSSMYNN 190 (464)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~---~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~ 190 (464)
............+..+.+.+++.+||+||.+......+. .++..++|++. ++....+.+. +
T Consensus 63 ---~~~~~~~~~~~~~~~l~~~l~~~~pDiv~~~gd~~~~la~a~aa~~~~ipv~h-~~~g~~s~~~----------~-- 126 (365)
T TIGR00236 63 ---PGQTLGEITSNMLEGLEELLLEEKPDIVLVQGDTTTTLAGALAAFYLQIPVGH-VEAGLRTGDR----------Y-- 126 (365)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHcCCCEEEEeCCchHHHHHHHHHHHhCCCEEE-EeCCCCcCCC----------C--
Confidence 000111122233456667789999999998754332221 55688999864 3321100000 0
Q ss_pred CcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCC-CCCCCcc--C---C--
Q 012436 191 NASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPC-DTSGLQV--L---P-- 262 (464)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~-d~~~~~~--~---~-- 262 (464)
..+.... .+ ....+.+|.++++|+..++.+.+.+-.++++.+++|++ |...... . .
T Consensus 127 ------~~~~~~~---~r-------~~~~~~ad~~~~~s~~~~~~l~~~G~~~~~I~vign~~~d~~~~~~~~~~~~~~~ 190 (365)
T TIGR00236 127 ------SPMPEEI---NR-------QLTGHIADLHFAPTEQAKDNLLRENVKADSIFVTGNTVIDALLTNVEIAYSSPVL 190 (365)
T ss_pred ------CCCccHH---HH-------HHHHHHHHhccCCCHHHHHHHHHcCCCcccEEEeCChHHHHHHHHHhhccchhHH
Confidence 0000000 00 11224589999999999999988643367899999996 4211110 0 0
Q ss_pred CCCCCCCcEEEEEe-cc-CCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEE
Q 012436 263 LERSTEYPAIISVA-QF-RPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEF 340 (464)
Q Consensus 263 ~~~~~~~~~i~~~G-~~-~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~ 340 (464)
.....++.++++.+ +. ...|+++.+++|+..+.+.. |++++++.|.+.. ...+. +.+.++..++|.+
T Consensus 191 ~~~~~~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~~----~~~~~vi~~~~~~----~~~~~---~~~~~~~~~~v~~ 259 (365)
T TIGR00236 191 SEFGEDKRYILLTLHRRENVGEPLENIFKAIREIVEEF----EDVQIVYPVHLNP----VVREP---LHKHLGDSKRVHL 259 (365)
T ss_pred HhcCCCCCEEEEecCchhhhhhHHHHHHHHHHHHHHHC----CCCEEEEECCCCh----HHHHH---HHHHhCCCCCEEE
Confidence 00011234556555 33 24589999999999987665 5888888865431 11122 2333455678999
Q ss_pred ccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEe-CCCCCccceecccCCccceeecC-CHHHHHHHHH
Q 012436 341 YKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAH-NSAGPKMDIVLEEDGQQTGFLAQ-NAEEYADAIV 418 (464)
Q Consensus 341 ~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~-~~~~~~~~~v~~~~~~~~g~~~~-~~~~la~~i~ 418 (464)
.|.++..++..+++.||+++.+| |..++|||++|+|||++ +.++. .+++.. + .+++++ |++++++++.
T Consensus 260 ~~~~~~~~~~~~l~~ad~vv~~S-----g~~~~EA~a~g~PvI~~~~~~~~-~e~~~~---g-~~~lv~~d~~~i~~ai~ 329 (365)
T TIGR00236 260 IEPLEYLDFLNLAANSHLILTDS-----GGVQEEAPSLGKPVLVLRDTTER-PETVEA---G-TNKLVGTDKENITKAAK 329 (365)
T ss_pred ECCCChHHHHHHHHhCCEEEECC-----hhHHHHHHHcCCCEEECCCCCCC-hHHHhc---C-ceEEeCCCHHHHHHHHH
Confidence 99999999999999999999886 55689999999999997 55555 677665 4 455555 9999999999
Q ss_pred HHHcCCHHHHHHHHHHH
Q 012436 419 KIISMPETERLEMAAAA 435 (464)
Q Consensus 419 ~l~~~~~~~~~~~~~~~ 435 (464)
++++ |++.+++++++.
T Consensus 330 ~ll~-~~~~~~~~~~~~ 345 (365)
T TIGR00236 330 RLLT-DPDEYKKMSNAS 345 (365)
T ss_pred HHHh-ChHHHHHhhhcC
Confidence 9999 998888877655
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.8e-18 Score=152.15 Aligned_cols=369 Identities=16% Similarity=0.195 Sum_probs=233.9
Q ss_pred ccceEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeecccccc
Q 012436 33 RTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIE 112 (464)
Q Consensus 33 ~~mkI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (464)
++.+++++ .++.-|-+.|+ +.-|..|++.|++|+.+-|..+. +.+++.+ .+.++++.++..++..
T Consensus 11 ~k~ra~vv--VLGDvGRSPRM-qYHA~Sla~~gf~VdliGy~~s~--p~e~l~~----------hprI~ih~m~~l~~~~ 75 (444)
T KOG2941|consen 11 KKKRAIVV--VLGDVGRSPRM-QYHALSLAKLGFQVDLIGYVESI--PLEELLN----------HPRIRIHGMPNLPFLQ 75 (444)
T ss_pred ccceEEEE--EecccCCChHH-HHHHHHHHHcCCeEEEEEecCCC--ChHHHhc----------CCceEEEeCCCCcccC
Confidence 33444433 23334444554 46688999999888887777542 1222221 1222444444332221
Q ss_pred ccc---CcceehhhhchhhhHHHHHHhhhcCCcEEEecccccc-cch----hhhccCceEEEEeeCCcchhhhhhccccc
Q 012436 113 EST---YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAF-TYP----LARIFGCRVICYTHYPTISLDMISRVREG 184 (464)
Q Consensus 113 ~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~-~~~----~~~~~~~p~v~~~h~p~~~~~~~~~~~~~ 184 (464)
... +-.+..+++++ ...+.++....+|++..+..... .+. +....+.+++++.|+-..+ -..
T Consensus 76 ~~p~~~~l~lKvf~Qfl---~Ll~aL~~~~~~~~ilvQNPP~iPtliv~~~~~~l~~~KfiIDWHNy~Ys-l~l------ 145 (444)
T KOG2941|consen 76 GGPRVLFLPLKVFWQFL---SLLWALFVLRPPDIILVQNPPSIPTLIVCVLYSILTGAKFIIDWHNYGYS-LQL------ 145 (444)
T ss_pred CCchhhhhHHHHHHHHH---HHHHHHHhccCCcEEEEeCCCCCchHHHHHHHHHHhcceEEEEehhhHHH-HHH------
Confidence 111 01112222332 23334445678898875443221 111 3347899999999943211 000
Q ss_pred ccccCCCcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCC-CCCeEEecCCC---CCCC---
Q 012436 185 SSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPC---DTSG--- 257 (464)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~-~~~i~~i~~~~---d~~~--- 257 (464)
.+........-+...+.|+..-+.||.-+|+++.+++.+.+.+|. ..++.+-.++- +.+.
T Consensus 146 -------------~~~~g~~h~lV~l~~~~E~~fgk~a~~nLcVT~AMr~dL~qnWgi~ra~v~YDrPps~~~~l~~~H~ 212 (444)
T KOG2941|consen 146 -------------KLKLGFQHPLVRLVRWLEKYFGKLADYNLCVTKAMREDLIQNWGINRAKVLYDRPPSKPTPLDEQHE 212 (444)
T ss_pred -------------HhhcCCCCchHHHHHHHHHHhhcccccchhhHHHHHHHHHHhcCCceeEEEecCCCCCCCchhHHHH
Confidence 011111123355667788899999999999999999999999985 33332222221 1110
Q ss_pred -CccC-----------CCCC-------------------CCCCcEEEEEeccCCCCChHHHHHHHHHHHHH---hcCCCC
Q 012436 258 -LQVL-----------PLER-------------------STEYPAIISVAQFRPEKAHPLQLEAFSVALRK---LDADLP 303 (464)
Q Consensus 258 -~~~~-----------~~~~-------------------~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~---~~~~~p 303 (464)
|.+. +... .+.+..++...++.+..++..+++|+....++ ..-..|
T Consensus 213 lf~~l~~d~~~f~ar~~q~~~~~~taf~~k~~s~~v~~~~~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP 292 (444)
T KOG2941|consen 213 LFMKLAGDHSPFRAREPQDKALERTAFTKKDASGDVQLLPERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLP 292 (444)
T ss_pred HHhhhccccchhhhcccccchhhhhhHhhhcccchhhhccCCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCC
Confidence 1100 0000 02335666777789999999999999854222 122458
Q ss_pred CcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHHHhcCcEEE--EcCC-CCCCChHHHHHHHhCC
Q 012436 304 RPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGI--HSMI-DEHFGISVVEYMAAGA 380 (464)
Q Consensus 304 ~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v--~ps~-~e~~~~~~~Ea~a~G~ 380 (464)
.+-++|.|.||.+ +...+.++++++...-....++.-+|.+.+++.||+.| ++|. .-..|+.+++...||+
T Consensus 293 ~llciITGKGPlk------E~Y~~~I~~~~~~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcgl 366 (444)
T KOG2941|consen 293 SLLCIITGKGPLK------EKYSQEIHEKNLQHVQVCTPWLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGL 366 (444)
T ss_pred cEEEEEcCCCchh------HHHHHHHHHhcccceeeeecccccccchhHhhccccceEeeecCcccCcchhHHHhhcCCC
Confidence 8999999999875 67777788888764334468889999999999999755 4553 4478999999999999
Q ss_pred cEEEeCCCCCccceecccCCccceeecCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHHHccCHHHHHHH
Q 012436 381 IPIAHNSAGPKMDIVLEEDGQQTGFLAQNAEEYADAIVKIIS---MPETERLEMAAAARRRAARFSEQRFYED 450 (464)
Q Consensus 381 PvI~~~~~~~~~~~v~~~~~~~~g~~~~~~~~la~~i~~l~~---~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 450 (464)
||++-+.... .|++.+ ++||++++|.+++++.++.+.+ -+.+.+.++..++++. +...|+..-++
T Consensus 367 PvcA~~fkcl-~ELVkh---~eNGlvF~Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~-~e~RW~~~W~~ 434 (444)
T KOG2941|consen 367 PVCAVNFKCL-DELVKH---GENGLVFEDSEELAEQLQMLFKNFPDNADELNQLKKNLREE-QELRWDESWER 434 (444)
T ss_pred ceeeecchhH-HHHHhc---CCCceEeccHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHHH-HhhhHHHHHHH
Confidence 9999999887 899999 9999999999999999998886 1567788888888876 44555554433
|
|
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.85 E-value=1e-19 Score=174.98 Aligned_cols=253 Identities=17% Similarity=0.059 Sum_probs=171.4
Q ss_pred hhhHHHHHHhhhcCCcEEEecccccccch---hhhccCceEEEEeeCCcchhhhhhcccccccccCCCcccccchhhhHH
Q 012436 127 GSVYLSWEALCKFTPLYYFDTSGYAFTYP---LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQC 203 (464)
Q Consensus 127 ~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~---~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (464)
.......+.+++.+||+||.+......+. .++..++|++...|+ ..+.+ . ...+.
T Consensus 75 ~~~~~l~~~l~~~~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g-~~s~~-------~-----------~~~~~--- 132 (363)
T cd03786 75 GLLIGLEAVLLEEKPDLVLVLGDTNETLAAALAAFKLGIPVAHVEAG-LRSFD-------R-----------GMPDE--- 132 (363)
T ss_pred HHHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEecc-cccCC-------C-----------CCCch---
Confidence 34556667788889999997754332222 555789998754431 10000 0 00000
Q ss_pred HHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCC-CCCCCccC---------CCCCCCCCcEEE
Q 012436 204 KIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPC-DTSGLQVL---------PLERSTEYPAII 273 (464)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~-d~~~~~~~---------~~~~~~~~~~i~ 273 (464)
. ....+.+.+|.+++.|+..++.+.+.+-.++++.+++||+ |...+... .....+++..++
T Consensus 133 --~-------~r~~~~~~ad~~~~~s~~~~~~l~~~G~~~~kI~vign~v~d~~~~~~~~~~~~~~~~~~~~~~~~~vlv 203 (363)
T cd03786 133 --E-------NRHAIDKLSDLHFAPTEEARRNLLQEGEPPERIFVVGNTMIDALLRLLELAKKELILELLGLLPKKYILV 203 (363)
T ss_pred --H-------HHHHHHHHhhhccCCCHHHHHHHHHcCCCcccEEEECchHHHHHHHHHHhhccchhhhhcccCCCCEEEE
Confidence 0 0112346789999999999999987643367899999985 43211100 011123445677
Q ss_pred EEeccCC---CCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCC-CCcEEEccCCChhHH
Q 012436 274 SVAQFRP---EKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKV-DGNVEFYKNLLYRDL 349 (464)
Q Consensus 274 ~~G~~~~---~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l-~~~v~~~g~~~~~~~ 349 (464)
+.|+... .|+++.++++++.+... ++.+++.|+++.. +.+++.+.++++ .++|.+.|..+.+++
T Consensus 204 ~~~r~~~~~~~k~~~~l~~al~~l~~~------~~~vi~~~~~~~~------~~l~~~~~~~~~~~~~v~~~~~~~~~~~ 271 (363)
T cd03786 204 TLHRVENVDDGEQLEEILEALAELAEE------DVPVVFPNHPRTR------PRIREAGLEFLGHHPNVLLISPLGYLYF 271 (363)
T ss_pred EeCCccccCChHHHHHHHHHHHHHHhc------CCEEEEECCCChH------HHHHHHHHhhccCCCCEEEECCcCHHHH
Confidence 8888764 79999999999988542 4677776665432 677777777765 578999998888999
Q ss_pred HHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC-CHHHHHHHHHHHHcCCHHHH
Q 012436 350 VKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ-NAEEYADAIVKIISMPETER 428 (464)
Q Consensus 350 ~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~-~~~~la~~i~~l~~~~~~~~ 428 (464)
..+|+.||++|.+|. | ...|||++|+|+|+++..+...+.+.. +.++.++ |+++++++|.++++ ++..+
T Consensus 272 ~~l~~~ad~~v~~Sg----g-i~~Ea~~~g~PvI~~~~~~~~~~~~~~----g~~~~~~~~~~~i~~~i~~ll~-~~~~~ 341 (363)
T cd03786 272 LLLLKNADLVLTDSG----G-IQEEASFLGVPVLNLRDRTERPETVES----GTNVLVGTDPEAILAAIEKLLS-DEFAY 341 (363)
T ss_pred HHHHHcCcEEEEcCc----c-HHhhhhhcCCCEEeeCCCCccchhhhe----eeEEecCCCHHHHHHHHHHHhc-Cchhh
Confidence 999999999999974 3 478999999999999754433455544 3444444 79999999999999 88776
Q ss_pred HHHH
Q 012436 429 LEMA 432 (464)
Q Consensus 429 ~~~~ 432 (464)
.++.
T Consensus 342 ~~~~ 345 (363)
T cd03786 342 SLMS 345 (363)
T ss_pred hcCC
Confidence 6653
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.8e-19 Score=174.38 Aligned_cols=342 Identities=13% Similarity=0.134 Sum_probs=204.0
Q ss_pred cceEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeeccccccc
Q 012436 34 TTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEE 113 (464)
Q Consensus 34 ~mkI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (464)
+|||++..... ||.-.-.. ++++|.+.+++++++...+. ..... ++. ...++..++...+.
T Consensus 1 ~~ki~i~~Ggt---~G~i~~a~-l~~~L~~~~~~~~~~~~~~~------~~~~~-----~~~--~~~~~~~l~~~g~~-- 61 (380)
T PRK00025 1 PLRIAIVAGEV---SGDLLGAG-LIRALKARAPNLEFVGVGGP------RMQAA-----GCE--SLFDMEELAVMGLV-- 61 (380)
T ss_pred CceEEEEecCc---CHHHHHHH-HHHHHHhcCCCcEEEEEccH------HHHhC-----CCc--cccCHHHhhhccHH--
Confidence 47888865443 45555554 99999998877776655432 11111 110 00111111111110
Q ss_pred ccCcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccch---hhhccCceEEEEeeCCcchhhhhhcccccccccCC
Q 012436 114 STYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP---LARIFGCRVICYTHYPTISLDMISRVREGSSMYNN 190 (464)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~---~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~ 190 (464)
..+......+.....+.+.+++.+||+||.+....+... .++..++|++.+.+...
T Consensus 62 ---~~~~~~~~~~~~~~~~~~~l~~~kPdivi~~~~~~~~~~~a~~a~~~~ip~i~~~~~~~------------------ 120 (380)
T PRK00025 62 ---EVLPRLPRLLKIRRRLKRRLLAEPPDVFIGIDAPDFNLRLEKKLRKAGIPTIHYVSPSV------------------ 120 (380)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHCCCCEEEEeCCch------------------
Confidence 112222334556677888899999999987642222211 34567999987655110
Q ss_pred CcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccC-------CC
Q 012436 191 NASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVL-------PL 263 (464)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~-------~~ 263 (464)
|... . . ..+.+.+.+|.+++.|+..++.+.+. +. ++.++.|++........ ..
T Consensus 121 --------~~~~-~----~----~~~~~~~~~d~i~~~~~~~~~~~~~~-g~--~~~~~G~p~~~~~~~~~~~~~~~~~l 180 (380)
T PRK00025 121 --------WAWR-Q----G----RAFKIAKATDHVLALFPFEAAFYDKL-GV--PVTFVGHPLADAIPLLPDRAAARARL 180 (380)
T ss_pred --------hhcC-c----h----HHHHHHHHHhhheeCCccCHHHHHhc-CC--CeEEECcCHHHhcccccChHHHHHHc
Confidence 0000 0 0 01223477899999999999888764 32 46677776543211100 01
Q ss_pred CCCCCCcEE-EEEecc-CCC-CChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhc-CCCCcEE
Q 012436 264 ERSTEYPAI-ISVAQF-RPE-KAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIEL-KVDGNVE 339 (464)
Q Consensus 264 ~~~~~~~~i-~~~G~~-~~~-K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~-~l~~~v~ 339 (464)
..+++.+++ ++.|+- ... +..+.++++++.+.++. |+++++++|+++ ...+++++.++++ ++. +.
T Consensus 181 ~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~----~~~~~ii~~~~~-----~~~~~~~~~~~~~~~~~--v~ 249 (380)
T PRK00025 181 GLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRY----PDLRFVLPLVNP-----KRREQIEEALAEYAGLE--VT 249 (380)
T ss_pred CCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhC----CCeEEEEecCCh-----hhHHHHHHHHhhcCCCC--eE
Confidence 112334554 444532 232 45788999999887665 588999998633 2235667766665 543 44
Q ss_pred EccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEe-----------------CCCCCccceecccCCcc
Q 012436 340 FYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAH-----------------NSAGPKMDIVLEEDGQQ 402 (464)
Q Consensus 340 ~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~-----------------~~~~~~~~~v~~~~~~~ 402 (464)
+.. +++.++|+.||+++.+| |.+.+|||++|+|+|++ +.++. .+++.+ +.
T Consensus 250 ~~~----~~~~~~~~~aDl~v~~s-----G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~---~~ 316 (380)
T PRK00025 250 LLD----GQKREAMAAADAALAAS-----GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSL-PNLLAG---RE 316 (380)
T ss_pred EEc----ccHHHHHHhCCEEEECc-----cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeeh-HHHhcC---CC
Confidence 432 57999999999999986 77888999999999987 22222 244433 22
Q ss_pred --ceeecC--CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhh
Q 012436 403 --TGFLAQ--NAEEYADAIVKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIRPILCH 461 (464)
Q Consensus 403 --~g~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 461 (464)
.+++.+ |++++++++.++++ |++.++++++++.+..+.. -..-++++.+.+.+.+.+
T Consensus 317 ~~~~~~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~~-~~~a~~~~~~~i~~~~~~ 377 (380)
T PRK00025 317 LVPELLQEEATPEKLARALLPLLA-DGARRQALLEGFTELHQQL-RCGADERAAQAVLELLKQ 377 (380)
T ss_pred cchhhcCCCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHh-CCCHHHHHHHHHHHHhhh
Confidence 335543 89999999999999 9999999999886655333 223455555555555443
|
|
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.5e-18 Score=164.21 Aligned_cols=225 Identities=28% Similarity=0.351 Sum_probs=184.9
Q ss_pred cCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccC--CCCCCCCCcEEEEEeccCCCCChHHHHHHHHHHHHHh
Q 012436 221 CADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVL--PLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKL 298 (464)
Q Consensus 221 ~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~--~~~~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~ 298 (464)
..+.+++.+......+...+. ..++.+++++++.+.+... ..........++++|++.+.||++.+++++..+....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~ 228 (381)
T COG0438 150 LADRVIAVSPALKELLEALGV-PNKIVVIPNGIDTEKFAPARIGLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRG 228 (381)
T ss_pred cccEEEECCHHHHHHHHHhCC-CCCceEecCCcCHHHcCccccCCCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhc
Confidence 578999999988777766643 4478889999998877642 2221121379999999999999999999999998875
Q ss_pred cCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHh
Q 012436 299 DADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAA 378 (464)
Q Consensus 299 ~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~ 378 (464)
+++.+.++|.++.. .+.+.....+.+..+++.+.|.++.+++..+++.+|++++||..|++|++++|||++
T Consensus 229 ----~~~~~~~~g~~~~~-----~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~ 299 (381)
T COG0438 229 ----PDIKLVIVGDGPER-----REELEKLAKKLGLEDNVKFLGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAA 299 (381)
T ss_pred ----CCeEEEEEcCCCcc-----HHHHHHHHHHhCCCCcEEEecccCHHHHHHHHHhCCEEEeccccccchHHHHHHHhc
Confidence 35899999998753 245555777777778999999999888999999999999999889999999999999
Q ss_pred CCcEEEeCCCCCccceecccCCccceeecC--CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-HccCHHHHHHHHHHHH
Q 012436 379 GAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ--NAEEYADAIVKIISMPETERLEMAAAARRRA-ARFSEQRFYEDFKAAI 455 (464)
Q Consensus 379 G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~ 455 (464)
|+|||+++.++. .+++.+ +.+|++++ +.+++++++..+.+ +++.++.+.+.+++.+ +.|+|+...+++.+++
T Consensus 300 g~pvi~~~~~~~-~e~~~~---~~~g~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (381)
T COG0438 300 GTPVIASDVGGI-PEVVED---GETGLLVPPGDVEELADALEQLLE-DPELREELGEAARERVEEEFSWERIAEQLLELY 374 (381)
T ss_pred CCcEEECCCCCh-HHHhcC---CCceEecCCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 999999999976 677776 55677665 58999999999999 8877888887677777 7999999999999999
Q ss_pred HHHHh
Q 012436 456 RPILC 460 (464)
Q Consensus 456 ~~~~~ 460 (464)
.....
T Consensus 375 ~~~~~ 379 (381)
T COG0438 375 EELLA 379 (381)
T ss_pred HHHHh
Confidence 87754
|
|
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.2e-18 Score=171.06 Aligned_cols=216 Identities=17% Similarity=0.138 Sum_probs=178.4
Q ss_pred hhcCCEEEEcCHHHHHHHHHHhCCC---CCeEEecCCCCCCCCccCCCCCCCCCcEEEEEe--ccCCCCChHHHHHHHHH
Q 012436 219 GSCADLAMVNSSWTQSHIEKLWGIP---DRIKRVYPPCDTSGLQVLPLERSTEYPAIISVA--QFRPEKAHPLQLEAFSV 293 (464)
Q Consensus 219 ~~~ad~vi~~S~~~~~~~~~~~~~~---~~i~~i~~~~d~~~~~~~~~~~~~~~~~i~~~G--~~~~~K~~~~ll~a~~~ 293 (464)
+..+|.+|+.|+...+.+...++.. .++..||++. .... ..........+++++ |+ +.|.++.+++++.+
T Consensus 270 ~~~~d~iIv~T~~q~~~l~~~~~~~~~~~~v~~Ip~~~-~~~~---~~~s~r~~~~~I~v~idrL-~ek~~~~~I~av~~ 344 (519)
T TIGR03713 270 LSRADLIIVDREDIERLLEENYRENYVEFDISRITPFD-TRLR---LGQSQQLYETEIGFWIDGL-SDEELQQILQQLLQ 344 (519)
T ss_pred hhhcCeEEEcCHHHHHHHHHHhhhcccCCcceeeCccc-eEEe---cChhhcccceEEEEEcCCC-ChHHHHHHHHHHHH
Confidence 3678999999988888887776421 4456677554 3222 112223345788888 99 99999999999999
Q ss_pred HHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCC-----------------------------CcEEEccCC
Q 012436 294 ALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVD-----------------------------GNVEFYKNL 344 (464)
Q Consensus 294 l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~-----------------------------~~v~~~g~~ 344 (464)
+.++. |+++|.+.|.+.+. ++.+.++++++++++. .+|.|.|..
T Consensus 345 ~~~~~----p~~~L~~~gy~~~~---~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~gy~ 417 (519)
T TIGR03713 345 YILKN----PDYELKILTYNNDN---DITQLLEDILEQINEEYNQDKNFFSLSEQDENQPILQTDEEQKEKERIAFTTLT 417 (519)
T ss_pred HHhhC----CCeEEEEEEecCch---hHHHHHHHHHHHHHhhhchhhhccccchhhhhhhcccchhhcccccEEEEEecC
Confidence 98887 79999999988542 3456676776666555 789999999
Q ss_pred ChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecCCHHHHHHHHHHHHcCC
Q 012436 345 LYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQNAEEYADAIVKIISMP 424 (464)
Q Consensus 345 ~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~~~~~la~~i~~l~~~~ 424 (464)
+..++.+.|+.+.++|.+|..|+++ +.+||+++|+|+| +.+ . .+++.+ +.||++++|.++|++++..+++ +
T Consensus 418 ~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~GiPqI--nyg-~-~~~V~d---~~NG~li~d~~~l~~al~~~L~-~ 488 (519)
T TIGR03713 418 NEEDLISALDKLRLIIDLSKEPDLY-TQISGISAGIPQI--NKV-E-TDYVEH---NKNGYIIDDISELLKALDYYLD-N 488 (519)
T ss_pred CHHHHHHHHhhheEEEECCCCCChH-HHHHHHHcCCCee--ecC-C-ceeeEc---CCCcEEeCCHHHHHHHHHHHHh-C
Confidence 8889999999999999999999999 9999999999999 333 4 689999 9999999999999999999999 9
Q ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q 012436 425 ETERLEMAAAARRRAARFSEQRFYEDFKAAI 455 (464)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 455 (464)
++.++++...+.+.+++||-+++.++|.+++
T Consensus 489 ~~~wn~~~~~sy~~~~~yS~~~i~~kW~~~~ 519 (519)
T TIGR03713 489 LKNWNYSLAYSIKLIDDYSSENIIERLNELI 519 (519)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHhhC
Confidence 9999999999999999999999999998753
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.9e-17 Score=167.50 Aligned_cols=290 Identities=14% Similarity=0.108 Sum_probs=200.8
Q ss_pred hhhcCC-cEEEecccccccch--hhh-ccCceEEEEeeCCcchhhhhhcccccccccCCCcccccchhhhHHHHHHHHHH
Q 012436 136 LCKFTP-LYYFDTSGYAFTYP--LAR-IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFF 211 (464)
Q Consensus 136 l~~~~~-Dvv~~~~~~~~~~~--~~~-~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (464)
.+..++ |+|..|..+...+| +.+ ..+.++-+++|-|..+.++.+.+..+ ..+
T Consensus 226 ~~~~~~gD~VWVHDYHL~LlP~~LR~~~p~~~IGfFlHiPFPs~Eifr~LP~r-----------------------~el- 281 (934)
T PLN03064 226 NEHYEEGDVVWCHDYHLMFLPKCLKEYNSNMKVGWFLHTPFPSSEIHRTLPSR-----------------------SEL- 281 (934)
T ss_pred HHhcCCCCEEEEecchhhHHHHHHHHhCCCCcEEEEecCCCCChHHHhhCCcH-----------------------HHH-
Confidence 334455 57777777777777 333 56788999999777655554333200 011
Q ss_pred HHHHHHHhhcCCEEEEcCHHHHHHHHHHh----CC------------CCCeEEecCCCCCCCCccCCCCC----------
Q 012436 212 SWMYGLVGSCADLAMVNSSWTQSHIEKLW----GI------------PDRIKRVYPPCDTSGLQVLPLER---------- 265 (464)
Q Consensus 212 ~~~~~~~~~~ad~vi~~S~~~~~~~~~~~----~~------------~~~i~~i~~~~d~~~~~~~~~~~---------- 265 (464)
-..+-.||.|=..+...++.|.+.. +. ..++.++|-|+|.+.+.......
T Consensus 282 ----L~glL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr 357 (934)
T PLN03064 282 ----LRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELK 357 (934)
T ss_pred ----HHHHhcCCeEEeCCHHHHHHHHHHHHHHhCccccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHH
Confidence 2234678888888888777775421 11 12355678899988776321111
Q ss_pred --CCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCC---ccHHHHHHHHHHHHhc----CC--
Q 012436 266 --STEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNK---SDEERLQSLKDKSIEL----KV-- 334 (464)
Q Consensus 266 --~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~---~~~~~~~~l~~~~~~~----~l-- 334 (464)
-.++.+|++++|++..||+...+.|++.+.+++++...++.|+-+...... +..++..++.+++.+. |-
T Consensus 358 ~~~~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~ 437 (934)
T PLN03064 358 ERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLT 437 (934)
T ss_pred HHhCCceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCC
Confidence 135679999999999999999999999988876321123444444432211 2223333444444332 21
Q ss_pred -CCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCC----cEEEeCCCCCccceecccCCccceeecC-
Q 012436 335 -DGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGA----IPIAHNSAGPKMDIVLEEDGQQTGFLAQ- 408 (464)
Q Consensus 335 -~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~----PvI~~~~~~~~~~~v~~~~~~~~g~~~~- 408 (464)
.+-+.+...++.+++..+|+.||++++||..||++++..|||+|+. ++|.|...|... .+ +..+++++
T Consensus 438 w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~Eyva~~~~~~GvLILSEfaGaa~-~L-----~~~AllVNP 511 (934)
T PLN03064 438 AVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQDSKKGVLILSEFAGAAQ-SL-----GAGAILVNP 511 (934)
T ss_pred cceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHHHHHHhhcCCCCCeEEeCCCchHH-Hh-----CCceEEECC
Confidence 1223344568999999999999999999999999999999999944 455588887743 33 24577775
Q ss_pred -CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Q 012436 409 -NAEEYADAIVKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIRPIL 459 (464)
Q Consensus 409 -~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 459 (464)
|+++++++|.++++|+++++++..+..++.+..+++..+++.+++.+.+..
T Consensus 512 ~D~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~~L~~~~ 563 (934)
T PLN03064 512 WNITEVAASIAQALNMPEEEREKRHRHNFMHVTTHTAQEWAETFVSELNDTV 563 (934)
T ss_pred CCHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999988887764
|
|
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.6e-16 Score=146.05 Aligned_cols=326 Identities=16% Similarity=0.115 Sum_probs=203.8
Q ss_pred CCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeecccccccccCcceehhhhchh
Q 012436 48 GGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFG 127 (464)
Q Consensus 48 GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (464)
||.-.....++++|.++|++ +|.+........ . ......+ .++..++..++.....+..+...+..+.
T Consensus 11 GGHv~pAlAl~~~l~~~g~~-~v~~~~~~~~~e-~----~l~~~~~------~~~~~I~~~~~~~~~~~~~~~~~~~~~~ 78 (357)
T COG0707 11 GGHVFPALALAEELAKRGWE-QVIVLGTGDGLE-A----FLVKQYG------IEFELIPSGGLRRKGSLKLLKAPFKLLK 78 (357)
T ss_pred ccchhHHHHHHHHHHhhCcc-EEEEecccccce-e----eeccccC------ceEEEEecccccccCcHHHHHHHHHHHH
Confidence 78999999999999999976 666654332111 1 0111111 2444555444433333333333345566
Q ss_pred hhHHHHHHhhhcCCcEEEecccccccch--hhhccCceEEEEeeCCcchhhhhhcccccccccCCCcccccchhhhHHHH
Q 012436 128 SVYLSWEALCKFTPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKI 205 (464)
Q Consensus 128 ~~~~~~~~l~~~~~Dvv~~~~~~~~~~~--~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (464)
....+.+.+++++||+|+++.++...-+ .++..++|++++-.+-. .+.
T Consensus 79 ~~~~a~~il~~~kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEqn~~---------------------------~G~--- 128 (357)
T COG0707 79 GVLQARKILKKLKPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQNAV---------------------------PGL--- 128 (357)
T ss_pred HHHHHHHHHHHcCCCEEEecCCccccHHHHHHHhCCCCEEEEecCCC---------------------------cch---
Confidence 7788888999999999998888776644 45588999988433110 000
Q ss_pred HHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCc-cCCCCC---CCCCcEEEEEeccCCC
Q 012436 206 VYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQ-VLPLER---STEYPAIISVAQFRPE 281 (464)
Q Consensus 206 ~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~-~~~~~~---~~~~~~i~~~G~~~~~ 281 (464)
..+...+.++.|.+.-+. ...+..+++..++.+|+..+... +....+ ..++++|+.+|.....
T Consensus 129 --------ank~~~~~a~~V~~~f~~-----~~~~~~~~~~~~tG~Pvr~~~~~~~~~~~~~~~~~~~~~ilV~GGS~Ga 195 (357)
T COG0707 129 --------ANKILSKFAKKVASAFPK-----LEAGVKPENVVVTGIPVRPEFEELPAAEVRKDGRLDKKTILVTGGSQGA 195 (357)
T ss_pred --------hHHHhHHhhceeeecccc-----ccccCCCCceEEecCcccHHhhccchhhhhhhccCCCcEEEEECCcchh
Confidence 113334677777764443 22222256788899998876654 111111 1256788888766555
Q ss_pred CChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHHHhcCcEEEE
Q 012436 282 KAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIH 361 (464)
Q Consensus 282 K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ 361 (464)
+.+..++..+.....+ +++++..++.. . .+++++...+++. +...++. +++.++|+.||++|.
T Consensus 196 ~~ln~~v~~~~~~l~~------~~~v~~~~G~~-----~-~~~~~~~~~~~~~---~~v~~f~--~dm~~~~~~ADLvIs 258 (357)
T COG0707 196 KALNDLVPEALAKLAN------RIQVIHQTGKN-----D-LEELKSAYNELGV---VRVLPFI--DDMAALLAAADLVIS 258 (357)
T ss_pred HHHHHHHHHHHHHhhh------CeEEEEEcCcc-----h-HHHHHHHHhhcCc---EEEeeHH--hhHHHHHHhccEEEe
Confidence 5455444444322221 35555554432 1 3455555555543 8889999 889999999999985
Q ss_pred cCCCCCCChHHHHHHHhCCcEEEeCCCCCc---c----ceecccCCccceeecC----CHHHHHHHHHHHHcCCHHHHHH
Q 012436 362 SMIDEHFGISVVEYMAAGAIPIAHNSAGPK---M----DIVLEEDGQQTGFLAQ----NAEEYADAIVKIISMPETERLE 430 (464)
Q Consensus 362 ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~---~----~~v~~~~~~~~g~~~~----~~~~la~~i~~l~~~~~~~~~~ 430 (464)
= +.++++.|..++|+|+|.-+.+... . ..+.+ .+.+.+.+ +++.+.+.|.++++ +++.+++
T Consensus 259 R----aGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~---~gaa~~i~~~~lt~~~l~~~i~~l~~-~~~~l~~ 330 (357)
T COG0707 259 R----AGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEK---AGAALVIRQSELTPEKLAELILRLLS-NPEKLKA 330 (357)
T ss_pred C----CcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHh---CCCEEEeccccCCHHHHHHHHHHHhc-CHHHHHH
Confidence 4 4478999999999999997655331 1 12223 34555554 58899999999999 9999999
Q ss_pred HHHHHHHHHHccCHHHHHHHHHH
Q 012436 431 MAAAARRRAARFSEQRFYEDFKA 453 (464)
Q Consensus 431 ~~~~~~~~~~~~s~~~~~~~~~~ 453 (464)
|.+++++....-..+.+++....
T Consensus 331 m~~~a~~~~~p~aa~~i~~~~~~ 353 (357)
T COG0707 331 MAENAKKLGKPDAAERIADLLLA 353 (357)
T ss_pred HHHHHHhcCCCCHHHHHHHHHHH
Confidence 99999876654555555554443
|
|
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.6e-15 Score=136.34 Aligned_cols=356 Identities=17% Similarity=0.122 Sum_probs=239.7
Q ss_pred HHHHHHHHHHHHhhhc--ccccccccceEEEecCCCCCC-C---------CcchhhHHHHHHhhhhCCCCceEEEcccCC
Q 012436 11 VITAVLASILILASHV--HNARRNRTTSVAFFHPNTNDG-G---------GGERVLWCAVKAIQEESPDLDCIVYTGDHD 78 (464)
Q Consensus 11 ~~~~~~~~~~~~~~~~--~~~~~~~~mkI~~~~~~~~~~-G---------G~~~~~~~l~~~L~~~g~~~~v~~~~~~~~ 78 (464)
++.+++.+..++.+.+ +.++.+.+.|.++..+...+. + |-.+.+.-|+++|.+..+++.+++.+...
T Consensus 10 ~~~~p~~~~~l~~R~~~~~~y~~r~~eRfg~~~~~~~~~~p~vWiHaaSVGEv~a~~pLv~~l~~~~P~~~ilvTt~T~- 88 (419)
T COG1519 10 TLALPFIAPRLLYRSFKGPKYRKRLGERFGFYKPPVKPEGPLVWIHAASVGEVLAALPLVRALRERFPDLRILVTTMTP- 88 (419)
T ss_pred HHHHHHHHHHHHHHhhcChHHHHHHHHHhcccCCCCCCCCCeEEEEecchhHHHHHHHHHHHHHHhCCCCCEEEEecCc-
Confidence 5667777777776666 778888778888554444332 1 56677889999999997777776655432
Q ss_pred CCchhHHHHHHhhcCcccCCCceeeeeecccccccccCcceehhhhchhhhHHHHHHhhhcCCcEEE--ecccccccchh
Q 012436 79 AFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYF--DTSGYAFTYPL 156 (464)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~--~~~~~~~~~~~ 156 (464)
.-.+.....++.. +...+++.. ......+.++..+||+++ .+-.|+..+.-
T Consensus 89 ----Tg~e~a~~~~~~~----v~h~YlP~D-------------------~~~~v~rFl~~~~P~l~Ii~EtElWPnli~e 141 (419)
T COG1519 89 ----TGAERAAALFGDS----VIHQYLPLD-------------------LPIAVRRFLRKWRPKLLIIMETELWPNLINE 141 (419)
T ss_pred ----cHHHHHHHHcCCC----eEEEecCcC-------------------chHHHHHHHHhcCCCEEEEEeccccHHHHHH
Confidence 2223334334432 233333331 123445668889999665 45566666556
Q ss_pred hhccCceEEEEeeCCcchhhhhhcccccccccCCCcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHH
Q 012436 157 ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHI 236 (464)
Q Consensus 157 ~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~ 236 (464)
++..++|.+.--- .++..+..-++.+..+.+.+++..|.|++.|+..++.+
T Consensus 142 ~~~~~~p~~LvNa-----------------------------RLS~rS~~~y~k~~~~~~~~~~~i~li~aQse~D~~Rf 192 (419)
T COG1519 142 LKRRGIPLVLVNA-----------------------------RLSDRSFARYAKLKFLARLLFKNIDLILAQSEEDAQRF 192 (419)
T ss_pred HHHcCCCEEEEee-----------------------------eechhhhHHHHHHHHHHHHHHHhcceeeecCHHHHHHH
Confidence 7788999987433 01111122233444566777899999999999999999
Q ss_pred HHHhCCCCCeEEecCC-CCCCCCcc-------CCCCCCCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEE
Q 012436 237 EKLWGIPDRIKRVYPP-CDTSGLQV-------LPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQ 308 (464)
Q Consensus 237 ~~~~~~~~~i~~i~~~-~d~~~~~~-------~~~~~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~ 308 (464)
.+.+ ..++.+..|= .|.+.... .........++++..++ ....-+.++++++.++++. |+..++
T Consensus 193 ~~LG--a~~v~v~GNlKfd~~~~~~~~~~~~~~r~~l~~~r~v~iaaST--H~GEeei~l~~~~~l~~~~----~~~llI 264 (419)
T COG1519 193 RSLG--AKPVVVTGNLKFDIEPPPQLAAELAALRRQLGGHRPVWVAAST--HEGEEEIILDAHQALKKQF----PNLLLI 264 (419)
T ss_pred HhcC--CcceEEecceeecCCCChhhHHHHHHHHHhcCCCCceEEEecC--CCchHHHHHHHHHHHHhhC----CCceEE
Confidence 9875 3346555541 22221110 01111122578888886 3444567899999999987 689999
Q ss_pred EEcCCCCCccHHHHHHHHHHHHhcCCC-------------CcEEEccCCChhHHHHHHhcCcEEEE-cCCCCCCChHHHH
Q 012436 309 FVGSCRNKSDEERLQSLKDKSIELKVD-------------GNVEFYKNLLYRDLVKLLGGAVVGIH-SMIDEHFGISVVE 374 (464)
Q Consensus 309 i~G~~~~~~~~~~~~~l~~~~~~~~l~-------------~~v~~~g~~~~~~~~~~l~~ad~~v~-ps~~e~~~~~~~E 374 (464)
++=..++ ..+.+++++++.|+. .+|.+...+ -|+..+|+.+|+.+. -|..+-.|--++|
T Consensus 265 lVPRHpE-----Rf~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~Dtm--GEL~l~y~~adiAFVGGSlv~~GGHN~LE 337 (419)
T COG1519 265 LVPRHPE-----RFKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGDTM--GELGLLYGIADIAFVGGSLVPIGGHNPLE 337 (419)
T ss_pred EecCChh-----hHHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEecH--hHHHHHHhhccEEEECCcccCCCCCChhh
Confidence 9988774 368888899888764 144444555 799999999998654 5655566788999
Q ss_pred HHHhCCcEEEeCCCCCccceecccCCccceeecCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 012436 375 YMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQNAEEYADAIVKIISMPETERLEMAAAARRRA 439 (464)
Q Consensus 375 a~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~ 439 (464)
+.++|+|||.-..-....|+.......+.++.++|.+.+++++..+++ |++.++++++++.+.+
T Consensus 338 pa~~~~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~~~~~l~~~v~~l~~-~~~~r~~~~~~~~~~v 401 (419)
T COG1519 338 PAAFGTPVIFGPYTFNFSDIAERLLQAGAGLQVEDADLLAKAVELLLA-DEDKREAYGRAGLEFL 401 (419)
T ss_pred HHHcCCCEEeCCccccHHHHHHHHHhcCCeEEECCHHHHHHHHHHhcC-CHHHHHHHHHHHHHHH
Confidence 999999999976544434544332225778889998899999998888 9999999999999888
|
|
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=99.73 E-value=4.5e-16 Score=149.42 Aligned_cols=258 Identities=14% Similarity=0.055 Sum_probs=163.0
Q ss_pred chhhhHHHHHHhhhcCCcEEEecccccccch---hhhccCceEEEEeeCCcchhhhhhcccccccccCCCcccccchhhh
Q 012436 125 SFGSVYLSWEALCKFTPLYYFDTSGYAFTYP---LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLS 201 (464)
Q Consensus 125 ~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~---~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (464)
.+.....+.+.+++.+||+|+.+.+.++... .++..|+|++.++ .|. .| .|..
T Consensus 74 ~~~~~~~~~~~l~~~kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i-~P~--------~w---------------aw~~ 129 (385)
T TIGR00215 74 LLKIRKEVVQLAKQAKPDLLVGIDAPDFNLTKELKKKDPGIKIIYYI-SPQ--------VW---------------AWRK 129 (385)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCccHHHHHHHhhCCCCEEEEe-CCc--------Hh---------------hcCc
Confidence 3445567778899999999997665333322 4457899999765 333 11 0110
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCc--cC------CCCCCCCCcEEE
Q 012436 202 QCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQ--VL------PLERSTEYPAII 273 (464)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~--~~------~~~~~~~~~~i~ 273 (464)
. -.+.+.+.+|.+++.++...+.+.+. + .+..++.||+...... .. ....+++.++++
T Consensus 130 ~-----------~~r~l~~~~d~v~~~~~~e~~~~~~~-g--~~~~~vGnPv~~~~~~~~~~~~~~r~~lgl~~~~~~Il 195 (385)
T TIGR00215 130 W-----------RAKKIEKATDFLLAILPFEKAFYQKK-N--VPCRFVGHPLLDAIPLYKPDRKSAREKLGIDHNGETLA 195 (385)
T ss_pred c-----------hHHHHHHHHhHhhccCCCcHHHHHhc-C--CCEEEECCchhhhccccCCCHHHHHHHcCCCCCCCEEE
Confidence 0 02444588999999999999988754 2 3566788887332211 00 011223456665
Q ss_pred EE-e-ccCC-CCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHH
Q 012436 274 SV-A-QFRP-EKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLV 350 (464)
Q Consensus 274 ~~-G-~~~~-~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~ 350 (464)
.. | |..+ .|++..++++++.+.+.. |++++++.+.... ..+.+++..++++....|.+.+. ++.
T Consensus 196 vl~GSR~aei~k~~~~ll~a~~~l~~~~----p~~~~vi~~~~~~-----~~~~~~~~~~~~~~~~~v~~~~~----~~~ 262 (385)
T TIGR00215 196 LLPGSRGSEVEKLFPLFLKAAQLLEQQE----PDLRRVLPVVNFK-----RRLQFEQIKAEYGPDLQLHLIDG----DAR 262 (385)
T ss_pred EECCCCHHHHHHhHHHHHHHHHHHHHhC----CCeEEEEEeCCch-----hHHHHHHHHHHhCCCCcEEEECc----hHH
Confidence 54 3 4444 688999999999987765 6888877654321 12445555555555556665543 456
Q ss_pred HHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccce----------------ecccCCccce-eec--C-CH
Q 012436 351 KLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDI----------------VLEEDGQQTG-FLA--Q-NA 410 (464)
Q Consensus 351 ~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~----------------v~~~~~~~~g-~~~--~-~~ 410 (464)
.+|+.||++|.+| |.+.+|+|++|+|+|...-....... +.+ .+.. .+. + ++
T Consensus 263 ~~l~aADl~V~~S-----Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~---~~~~pel~q~~~~~ 334 (385)
T TIGR00215 263 KAMFAADAALLAS-----GTAALEAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILAN---RLLVPELLQEECTP 334 (385)
T ss_pred HHHHhCCEEeecC-----CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcC---CccchhhcCCCCCH
Confidence 7999999999998 77777999999999987322111111 111 1111 111 2 79
Q ss_pred HHHHHHHHHHHcCCH----HHHHHHHHHHHHHHHcc
Q 012436 411 EEYADAIVKIISMPE----TERLEMAAAARRRAARF 442 (464)
Q Consensus 411 ~~la~~i~~l~~~~~----~~~~~~~~~~~~~~~~~ 442 (464)
+.+++.+.++++ |+ +.++++.+...+..+..
T Consensus 335 ~~l~~~~~~ll~-~~~~~~~~~~~~~~~~~~~~~~l 369 (385)
T TIGR00215 335 HPLAIALLLLLE-NGLKAYKEMHRERQFFEELRQRI 369 (385)
T ss_pred HHHHHHHHHHhc-CCcccHHHHHHHHHHHHHHHHHh
Confidence 999999999999 99 88888777666554444
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=99.73 E-value=9.7e-18 Score=136.98 Aligned_cols=130 Identities=31% Similarity=0.394 Sum_probs=94.8
Q ss_pred CcEEEEEeccCCCCChHHHHH-HHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChh
Q 012436 269 YPAIISVAQFRPEKAHPLQLE-AFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYR 347 (464)
Q Consensus 269 ~~~i~~~G~~~~~K~~~~ll~-a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~ 347 (464)
-++++++|++.+.|+++.+++ +++++.++. |+++|+|+|.+++ ++++. . .++|+++|++ +
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~----p~~~l~i~G~~~~--------~l~~~-~----~~~v~~~g~~--~ 62 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKH----PDIELIIIGNGPD--------ELKRL-R----RPNVRFHGFV--E 62 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHS----TTEEEEEECESS---------HHCCH-H----HCTEEEE-S---H
T ss_pred cccccccccccccccccchhhhHHHHHHHHC----cCEEEEEEeCCHH--------HHHHh-c----CCCEEEcCCH--H
Confidence 367899999999999999999 999999887 6999999999762 24443 1 3589999999 6
Q ss_pred HHHHHHhcCcEEEEcCC-CCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccce-eecCCHHHHHHHHHHHHc
Q 012436 348 DLVKLLGGAVVGIHSMI-DEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTG-FLAQNAEEYADAIVKIIS 422 (464)
Q Consensus 348 ~~~~~l~~ad~~v~ps~-~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g-~~~~~~~~la~~i~~l~~ 422 (464)
++.+++++||+++.|+. .++++.+++|||++|+|||+++. +. .++... .+.| ++.+|+++++++|.++++
T Consensus 63 e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~-~~~~~~---~~~~~~~~~~~~~l~~~i~~l~~ 134 (135)
T PF13692_consen 63 ELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-GA-EGIVEE---DGCGVLVANDPEELAEAIERLLN 134 (135)
T ss_dssp HHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-HC-HCHS------SEEEE-TT-HHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-ch-hhheee---cCCeEEECCCHHHHHHHHHHHhc
Confidence 99999999999999985 67899999999999999999998 44 455543 3444 444599999999999986
|
|
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.2e-13 Score=137.77 Aligned_cols=237 Identities=16% Similarity=0.123 Sum_probs=176.7
Q ss_pred HHHHHHhhcCCEEEEcCHHHHHHHHHHhCC--------CCCeEEecCCCCCCCCccCC-----------C----------
Q 012436 213 WMYGLVGSCADLAMVNSSWTQSHIEKLWGI--------PDRIKRVYPPCDTSGLQVLP-----------L---------- 263 (464)
Q Consensus 213 ~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~--------~~~i~~i~~~~d~~~~~~~~-----------~---------- 263 (464)
.|.+..+..||.+.++|+...+...+.++. ..++.-|-||+|...+.+.. .
T Consensus 254 nm~~lai~~S~~vngVS~lh~~v~~~l~~~l~~~~~~~~~~i~gItNGId~~~W~~~~~~~l~~~y~~~~w~~~~~~~~~ 333 (601)
T TIGR02094 254 NMTVLALRLSRIANGVSKLHGEVSRKMWQFLYPGYEEEEVPIGYVTNGVHNPTWVAPELRDLYERYLGENWRELLADEEL 333 (601)
T ss_pred eHHHHHHHhCCeeeeecHHHHHHHHHHHHhhhhhcccccCCccceeCCccccccCCHHHHHHHHHhCCcchhccchhhhh
Confidence 456778899999999999988755443321 23477789999987543110 0
Q ss_pred --------------------------------------------------CCCCCCcEEEEEeccCCCCChHHHHHHHHH
Q 012436 264 --------------------------------------------------ERSTEYPAIISVAQFRPEKAHPLQLEAFSV 293 (464)
Q Consensus 264 --------------------------------------------------~~~~~~~~i~~~G~~~~~K~~~~ll~a~~~ 293 (464)
...++.+.+++++|+...||.++++.++..
T Consensus 334 ~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~~gl~~dpd~~~ig~v~Rl~~yKr~dLil~~i~~ 413 (601)
T TIGR02094 334 WEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADAAILMATDRFLDPDVLTIGFARRFATYKRADLIFRDLER 413 (601)
T ss_pred hhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcchhhhhhccccCCCCcEEEEEEcchhhhhHHHHHHHHHH
Confidence 012345689999999999999999999988
Q ss_pred HHHHhcCCCCCcEEEEEcCCCCC--ccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHHHhcCcEEEE-cCC-CCCCC
Q 012436 294 ALRKLDADLPRPRLQFVGSCRNK--SDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIH-SMI-DEHFG 369 (464)
Q Consensus 294 l~~~~~~~~p~~~l~i~G~~~~~--~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~-ps~-~e~~~ 369 (464)
+.+...+...++++++.|.+... ...++.+.+.+++++...+++|.|+...+.+--..+++.||++++ ||. .|++|
T Consensus 414 l~~i~~~~~~pvq~V~~Gka~p~d~~gk~~i~~i~~la~~~~~~~kv~f~~~Yd~~lA~~i~aG~Dv~L~~Psr~~EacG 493 (601)
T TIGR02094 414 LARILNNPERPVQIVFAGKAHPADGEGKEIIQRIVEFSKRPEFRGRIVFLENYDINLARYLVSGVDVWLNNPRRPLEASG 493 (601)
T ss_pred HHHHhhCCCCCeEEEEEEecCcccchHHHHHHHHHHHHhcccCCCCEEEEcCCCHHHHHHHhhhheeEEeCCCCCcCCch
Confidence 87521100027899999987532 123466777777776556779999888888888889999999999 998 99999
Q ss_pred hHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC--------------CHHHHHHHHHHHH-----cCC-----H
Q 012436 370 ISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ--------------NAEEYADAIVKII-----SMP-----E 425 (464)
Q Consensus 370 ~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~--------------~~~~la~~i~~l~-----~~~-----~ 425 (464)
++-+-||..|.+.+++--|.. .|.. + +.+||.+. |.+++.++|++.+ + + |
T Consensus 494 tsqMka~~nGgL~~sv~DG~~-~E~~-~---~~nGf~f~~~~~~~~~~~~d~~da~~l~~~L~~ai~~~yy~-~~~~~~p 567 (601)
T TIGR02094 494 TSGMKAAMNGVLNLSILDGWW-GEGY-D---GDNGWAIGDGEEYDDEEEQDRLDAEALYDLLENEVIPLYYD-RDEKGIP 567 (601)
T ss_pred HHHHHHHHcCCceeecccCcc-cccC-C---CCcEEEECCCccccccccccCCCHHHHHHHHHHHHHHHHhc-CCcccCc
Confidence 999999999999999876555 3443 4 57898764 6777888886544 2 3 4
Q ss_pred HHHHHHHHHHHHHH-HccCHHHHHHHHHHHH
Q 012436 426 TERLEMAAAARRRA-ARFSEQRFYEDFKAAI 455 (464)
Q Consensus 426 ~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~ 455 (464)
..+.++.+++.+.. ..|||++++++|.+.|
T Consensus 568 ~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~y 598 (601)
T TIGR02094 568 ADWVEMMKESIATIAPRFSTNRMVREYVDKF 598 (601)
T ss_pred HHHHHHHHHHHhccCCCCCHHHHHHHHHHHh
Confidence 45778888887765 6899999999999876
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.5e-13 Score=133.29 Aligned_cols=287 Identities=19% Similarity=0.177 Sum_probs=172.5
Q ss_pred hhhcCC-cEEEecccccccch--hhh-ccCceEEEEeeCCcchhhhhhcccccccccCCCcccccchhhhHHHHHHHHHH
Q 012436 136 LCKFTP-LYYFDTSGYAFTYP--LAR-IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFF 211 (464)
Q Consensus 136 l~~~~~-Dvv~~~~~~~~~~~--~~~-~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (464)
.+..++ |+|..|..+...+| +.+ ..+.++.+++|-|..+.++.+.+.. ...
T Consensus 136 ~~~~~~~D~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~e~fr~lP~-----------------------r~e-- 190 (474)
T PF00982_consen 136 AEVYRPGDLVWVHDYHLMLLPQMLRERGPDARIGFFLHIPFPSSEIFRCLPW-----------------------REE-- 190 (474)
T ss_dssp GGG--TT-EEEEESGGGTTHHHHHHHTT--SEEEEEE-S----HHHHTTSTT-----------------------HHH--
T ss_pred HHhCcCCCEEEEeCCcHHHHHHHHHhhcCCceEeeEEecCCCCHHHHhhCCc-----------------------HHH--
Confidence 333444 67766777777766 333 5778999999987765555433220 001
Q ss_pred HHHHHHHhhcCCEEEEcCHHHHHHHHH----HhCC---C-----------CCeEEecCCCCCCCCccCCCCC--------
Q 012436 212 SWMYGLVGSCADLAMVNSSWTQSHIEK----LWGI---P-----------DRIKRVYPPCDTSGLQVLPLER-------- 265 (464)
Q Consensus 212 ~~~~~~~~~~ad~vi~~S~~~~~~~~~----~~~~---~-----------~~i~~i~~~~d~~~~~~~~~~~-------- 265 (464)
+ -..+-.||.|-..+...++.+.. ..+. . .++.+.|.|+|++.+.......
T Consensus 191 --i-L~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~~~v~~~~~~ 267 (474)
T PF00982_consen 191 --I-LRGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARSPEVQERAEE 267 (474)
T ss_dssp --H-HHHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-S---HHHHH
T ss_pred --H-HHHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCceEEECCEEEEEEEeeccCChHHHHhhccChHHHHHHHH
Confidence 1 22347899999999988877743 3222 1 1255678888887665221110
Q ss_pred ----CCC-CcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCcc---HHHHHHHHHHHHh----cC
Q 012436 266 ----STE-YPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSD---EERLQSLKDKSIE----LK 333 (464)
Q Consensus 266 ----~~~-~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~---~~~~~~l~~~~~~----~~ 333 (464)
-.+ ..+|+-+.|++..||+..=+.|++++.+++++...++.|+-++..+.... .++.+++++++.+ +|
T Consensus 268 l~~~~~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~psr~~~~~y~~~~~~v~~~v~~IN~~~g 347 (474)
T PF00982_consen 268 LREKFKGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVPSREDVPEYQELRREVEELVGRINGKYG 347 (474)
T ss_dssp HHHHTTT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B-STTSHHHHHHHHHHHHHHHHHHHHH-
T ss_pred HHHhcCCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeeccCccchhHHHHHHHHHHHHHHHHhhcc
Confidence 134 48899999999999999999999999988765556788888876433222 2455555555543 33
Q ss_pred CC---CcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCc----EEEeCCCCCccceecccCCccceee
Q 012436 334 VD---GNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAI----PIAHNSAGPKMDIVLEEDGQQTGFL 406 (464)
Q Consensus 334 l~---~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~P----vI~~~~~~~~~~~v~~~~~~~~g~~ 406 (464)
-. +-+.+.+.++.+++..+|+.||+++.+|..+|..++..|+.+|..+ +|.|...|.. +.+. +..++
T Consensus 348 ~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q~~~~GvLiLSefaGaa-~~L~-----~~al~ 421 (474)
T PF00982_consen 348 TPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVACQDDNPGVLILSEFAGAA-EQLS-----EAALL 421 (474)
T ss_dssp BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS-TS--EEEEETTBGGG-GT-T-----TS-EE
T ss_pred cCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEEecCCCCceEeeccCCHH-HHcC-----CccEE
Confidence 22 2345567789999999999999999999999999999999999664 7778877773 3332 23355
Q ss_pred cC--CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q 012436 407 AQ--NAEEYADAIVKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIR 456 (464)
Q Consensus 407 ~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 456 (464)
++ |++++|++|.++++|.+++++...+..++.+..++...+++.+++.++
T Consensus 422 VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~~~W~~~~l~~L~ 473 (474)
T PF00982_consen 422 VNPWDIEEVADAIHEALTMPPEERKERHARLREYVREHDVQWWAESFLRDLK 473 (474)
T ss_dssp E-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-HHHHHHHHHHHHH
T ss_pred ECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCCHHHHHHHHHHHhh
Confidence 54 999999999999999888888888888888899999999999887765
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=99.62 E-value=8.5e-14 Score=133.65 Aligned_cols=247 Identities=16% Similarity=0.132 Sum_probs=148.6
Q ss_pred HHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCCC------------------------CC-CC
Q 012436 213 WMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL------------------------ER-ST 267 (464)
Q Consensus 213 ~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~~------------------------~~-~~ 267 (464)
.+|+.+.+.||.+.++|+-++.+.....+.... .|+|||++.+.+..... .. .+
T Consensus 213 ~iEraaA~~AdvFTTVSeITa~Ea~~LL~r~pD-vV~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv~~~f~g~~dfd~d 291 (633)
T PF05693_consen 213 SIERAAAHYADVFTTVSEITAKEAEHLLKRKPD-VVTPNGLNVDKFPALHEFQNLHAKAKEKIHEFVRGHFYGHYDFDLD 291 (633)
T ss_dssp HHHHHHHHHSSEEEESSHHHHHHHHHHHSS--S-EE----B-GGGTSSTTHHHHHHHHHHHHHHHHHHHHSTT---S-GG
T ss_pred HHHHHHHHhcCeeeehhhhHHHHHHHHhCCCCC-EEcCCCccccccccchHHHHHHHHHHHHHHHHHHHHhcccCCCCcc
Confidence 578899999999999999999999988865444 46899999876652110 00 13
Q ss_pred CCcEEEEEeccC-CCCChHHHHHHHHHHHHHhcCCCCCc---EEEEEcCCCCCcc-------------------------
Q 012436 268 EYPAIISVAQFR-PEKAHPLQLEAFSVALRKLDADLPRP---RLQFVGSCRNKSD------------------------- 318 (464)
Q Consensus 268 ~~~~i~~~G~~~-~~K~~~~ll~a~~~l~~~~~~~~p~~---~l~i~G~~~~~~~------------------------- 318 (464)
+...|...||.+ ..||+|.+|+|+.+|....+....+. .|+++=.....-+
T Consensus 292 ~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~~~~ve~l~~~a~~~~l~~t~~~i~~~~g 371 (633)
T PF05693_consen 292 KTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTNSFNVESLKGQAVTKQLRDTVDEIQEKIG 371 (633)
T ss_dssp GEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEEEE-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccCCcCHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 446777889985 57999999999999865422111133 3334332211000
Q ss_pred --------------------HH----------------------------HHHHHHHHHHhcCCC----Cc--EEEccC-
Q 012436 319 --------------------EE----------------------------RLQSLKDKSIELKVD----GN--VEFYKN- 343 (464)
Q Consensus 319 --------------------~~----------------------------~~~~l~~~~~~~~l~----~~--v~~~g~- 343 (464)
.+ ..+.+-+.++++++. ++ |.|++.
T Consensus 372 ~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~irr~~L~N~~~drVKVIF~P~y 451 (633)
T PF05693_consen 372 KRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNMIRRLGLFNNPEDRVKVIFHPEY 451 (633)
T ss_dssp HHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHHHHHTT----TT-SEEEEE--S-
T ss_pred HHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHHHHhCCCCCCCCCceEEEEeecc
Confidence 00 011122222222221 33 344431
Q ss_pred C------ChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCC--ccceee-cC------
Q 012436 344 L------LYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDG--QQTGFL-AQ------ 408 (464)
Q Consensus 344 ~------~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~--~~~g~~-~~------ 408 (464)
+ =.-+..+++..||+.|+||.+|++|.+.+|+.++|+|.|+|+..|. ...+.+... ...|+. ++
T Consensus 452 L~~~dgif~l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGF-G~~~~~~~~~~~~~GV~VvdR~~~n~ 530 (633)
T PF05693_consen 452 LSGTDGIFNLDYYDFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGF-GCWMQEHIEDPEEYGVYVVDRRDKNY 530 (633)
T ss_dssp --TTSSSS-S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHH-HHHHHTTS-HHGGGTEEEE-SSSS-H
T ss_pred ccCCCCCCCCCHHHHhccCceeeeccccccccCChHHHhhcCCceeeccchhH-HHHHHHhhccCcCCcEEEEeCCCCCH
Confidence 1 1247888999999999999999999999999999999999999887 333332111 235543 32
Q ss_pred --CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhh
Q 012436 409 --NAEEYADAIVKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIRPILCH 461 (464)
Q Consensus 409 --~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 461 (464)
..+++++.|.++..+++.++..+++++.+..+..+|+.+...|.+.++-.+++
T Consensus 531 ~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~Ay~~AL~~ 585 (633)
T PF05693_consen 531 DESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEKAYDLALRR 585 (633)
T ss_dssp HHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHh
Confidence 35566677777777788888888888877779999999999999999887765
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.3e-13 Score=130.21 Aligned_cols=289 Identities=13% Similarity=0.123 Sum_probs=203.3
Q ss_pred hhhcCC-cEEEecccccccch--hhh-ccCceEEEEeeCCcchhhhhhcccccccccCCCcccccchhhhHHHHHHHHHH
Q 012436 136 LCKFTP-LYYFDTSGYAFTYP--LAR-IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFF 211 (464)
Q Consensus 136 l~~~~~-Dvv~~~~~~~~~~~--~~~-~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (464)
.+..++ |+|..|..+...+| +.+ ..+.++.+++|-|..+.++.+.+..+ ..+
T Consensus 118 ~~~~~~~D~VWVHDYhL~llp~~LR~~~~~~~IgFFlHiPFPs~eifr~LP~r-----------------------~ei- 173 (474)
T PRK10117 118 LPLLKDDDIIWIHDYHLLPFASELRKRGVNNRIGFFLHIPFPTPEIFNALPPH-----------------------DEL- 173 (474)
T ss_pred HHhcCCCCEEEEeccHhhHHHHHHHHhCCCCcEEEEEeCCCCChHHHhhCCCh-----------------------HHH-
Confidence 334454 67776777666666 333 56778999999777655554333210 011
Q ss_pred HHHHHHHhhcCCEEEEcCHHHHHHHHHHh----C-------------CCCCeEEecCCCCCCCCccCCCC----------
Q 012436 212 SWMYGLVGSCADLAMVNSSWTQSHIEKLW----G-------------IPDRIKRVYPPCDTSGLQVLPLE---------- 264 (464)
Q Consensus 212 ~~~~~~~~~~ad~vi~~S~~~~~~~~~~~----~-------------~~~~i~~i~~~~d~~~~~~~~~~---------- 264 (464)
-..+-.+|.|=..+...++.+.+.. + ..-++.+.|-|+|.+.+......
T Consensus 174 ----l~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~~~v~~~gr~v~v~~~PigID~~~~~~~a~~~~~~~~~~lr 249 (474)
T PRK10117 174 ----LEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSGKSHTAWGKAFRTEVYPIGIEPDEIAKQAAGPLPPKLAQLK 249 (474)
T ss_pred ----HHHHHhCccceeCCHHHHHHHHHHHHHHcCCcccCCCeEEECCeEEEEEEEECeEcHHHHHHHhhchHHHHHHHHH
Confidence 1223567888888887776665421 1 12235567888888776532111
Q ss_pred -CCCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCC---ccHHHHHHHHHHHHh----cCCC-
Q 012436 265 -RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNK---SDEERLQSLKDKSIE----LKVD- 335 (464)
Q Consensus 265 -~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~---~~~~~~~~l~~~~~~----~~l~- 335 (464)
.-.++..|+-+.|++..||+..=++|++.+.+++++...++.|+-+...+-. +..++..++++++.+ +|-.
T Consensus 250 ~~~~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~psR~~v~~Y~~l~~~v~~~vg~INg~fg~~~ 329 (474)
T PRK10117 250 AELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKYGQLG 329 (474)
T ss_pred HHcCCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHhccCCCC
Confidence 0135678999999999999999999999999887665567788877653322 223444555555544 3322
Q ss_pred --CcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCC-----cEEEeCCCCCccceecccCCccceeecC
Q 012436 336 --GNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGA-----IPIAHNSAGPKMDIVLEEDGQQTGFLAQ 408 (464)
Q Consensus 336 --~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~-----PvI~~~~~~~~~~~v~~~~~~~~g~~~~ 408 (464)
+-..+...++.+++..+|+.||+++.++..+|..++..|+.+|.. ..|.|...|..+++ ++ .++++
T Consensus 330 w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSefAGaA~~L------~~-AllVN 402 (474)
T PRK10117 330 WTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL------TS-ALIVN 402 (474)
T ss_pred ceeEEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeeecCCCCccEEEecccchHHHh------CC-CeEEC
Confidence 223345678999999999999999999999999999999999965 37888877774443 12 45554
Q ss_pred --CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Q 012436 409 --NAEEYADAIVKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIRPIL 459 (464)
Q Consensus 409 --~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 459 (464)
|.++++++|.++++|.++++++..+..++.+..++....++.+++.+.++.
T Consensus 403 P~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~~~fL~~L~~~~ 455 (474)
T PRK10117 403 PYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDLKQIV 455 (474)
T ss_pred CCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhh
Confidence 999999999999999899998888888888899999999999998887764
|
|
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=99.59 E-value=4e-13 Score=129.11 Aligned_cols=357 Identities=15% Similarity=0.086 Sum_probs=200.4
Q ss_pred CcchhhHHHHHHhhhhCCCCceE--EEcccCCCCchhHHHHHHhhcCcccCCCceeeeeecccccccccCcceehhhh-c
Q 012436 49 GGERVLWCAVKAIQEESPDLDCI--VYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQ-S 125 (464)
Q Consensus 49 G~~~~~~~l~~~L~~~g~~~~v~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 125 (464)
|-......++++|.+...+++|. =+.+.. ..+... .+... .++..++...+........+..... .
T Consensus 8 ged~~a~ai~~~l~~~~~~~~v~~~p~vG~~----~~~e~~-----~ip~~--g~~~~~~sgg~~~~~~~~~~~~~~~gl 76 (396)
T TIGR03492 8 GEDLIAARIAKALLQLSPDLNLEALPLVGEG----RAYQNL-----GIPII--GPTKELPSGGFSYQSLRGLLRDLRAGL 76 (396)
T ss_pred hHHHHHHHHHHHHHhhCCCCCeEEeCcccCC----HHHhhC-----CCcee--CCCCCCCCCCccCCCHHHHHHHHHhhH
Confidence 67778899999999853335655 133332 222111 11110 0223333333332222233333344 5
Q ss_pred hhhhHHHHHHhhhc--CCcEEEecccccccchhhhccCceEEE-EeeCCcchhhhhhcccccccccCCCcccccchhhhH
Q 012436 126 FGSVYLSWEALCKF--TPLYYFDTSGYAFTYPLARIFGCRVIC-YTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQ 202 (464)
Q Consensus 126 ~~~~~~~~~~l~~~--~~Dvv~~~~~~~~~~~~~~~~~~p~v~-~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (464)
+...+..++.+++. +||+|+...++. .+..++..++|+++ -.|.... .|... ...+...++.+
T Consensus 77 ~~~~~~~~~~~~~~~~~p~~v~~~Gg~v-~~~aA~~~~~p~~~~~~~esn~-------~~~~~------~~~~~~~~~~~ 142 (396)
T TIGR03492 77 VGLTLGQWRALRKWAKKGDLIVAVGDIV-PLLFAWLSGKPYAFVGTAKSDY-------YWESG------PRRSPSDEYHR 142 (396)
T ss_pred HHHHHHHHHHHHHHhhcCCEEEEECcHH-HHHHHHHcCCCceEEEeeccce-------eecCC------CCCccchhhhc
Confidence 56677888889999 999999888876 32367789999877 3352211 10000 00000011111
Q ss_pred HHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCCCCCCCCCcEE-EEEecc--C
Q 012436 203 CKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAI-ISVAQF--R 279 (464)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~~~~~~~~~~i-~~~G~~--~ 279 (464)
+.-..+..+ ...+...+.||.+.+..+...+.+.+. | .++.++.||+-............++.+++ +..|+- +
T Consensus 143 ~~G~~~~p~-e~n~l~~~~a~~v~~~~~~t~~~l~~~-g--~k~~~vGnPv~d~l~~~~~~~l~~~~~~lllLpGSR~ae 218 (396)
T TIGR03492 143 LEGSLYLPW-ERWLMRSRRCLAVFVRDRLTARDLRRQ-G--VRASYLGNPMMDGLEPPERKPLLTGRFRIALLPGSRPPE 218 (396)
T ss_pred cCCCccCHH-HHHHhhchhhCEEeCCCHHHHHHHHHC-C--CeEEEeCcCHHhcCccccccccCCCCCEEEEECCCCHHH
Confidence 100010111 012444589999999999999999765 3 48888999874433211111112233444 444443 2
Q ss_pred CCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCC--------------CcEEEccCCC
Q 012436 280 PEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVD--------------GNVEFYKNLL 345 (464)
Q Consensus 280 ~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~--------------~~v~~~g~~~ 345 (464)
..+++..++++++.+.++ +++.+++.-.+... .+.+++...+.++. +++.+..+.
T Consensus 219 ~~~~lp~~l~al~~L~~~-----~~~~~v~~~~~~~~-----~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~~~~- 287 (396)
T TIGR03492 219 AYRNLKLLLRALEALPDS-----QPFVFLAAIVPSLS-----LEKLQAILEDLGWQLEGSSEDQTSLFQKGTLEVLLGR- 287 (396)
T ss_pred HHccHHHHHHHHHHHhhC-----CCeEEEEEeCCCCC-----HHHHHHHHHhcCceecCCccccchhhccCceEEEech-
Confidence 336778999999998644 37777665433211 14455555544432 235665555
Q ss_pred hhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCcc--ceeccc--CCccceeecC-CHHHHHHHHHHH
Q 012436 346 YRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKM--DIVLEE--DGQQTGFLAQ-NAEEYADAIVKI 420 (464)
Q Consensus 346 ~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~--~~v~~~--~~~~~g~~~~-~~~~la~~i~~l 420 (464)
.++.++|+.||++|..| |.+..|++++|+|+|.....+... .+.... ..+....+.+ +++.+++++.++
T Consensus 288 -~~~~~~l~~ADlvI~rS-----Gt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~~l~g~~~~l~~~~~~~l~~~l~~l 361 (396)
T TIGR03492 288 -GAFAEILHWADLGIAMA-----GTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQSRLLGGSVFLASKNPEQAAQVVRQL 361 (396)
T ss_pred -HhHHHHHHhCCEEEECc-----CHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhHhhcCCEEecCCCCHHHHHHHHHHH
Confidence 78999999999999774 455599999999999987443311 111110 0012223344 889999999999
Q ss_pred HcCCHHHHHHHHHHHHHHH-HccCHHHHHHHHH
Q 012436 421 ISMPETERLEMAAAARRRA-ARFSEQRFYEDFK 452 (464)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~ 452 (464)
++ |++.++++.+++++.. +....+.+++.+.
T Consensus 362 l~-d~~~~~~~~~~~~~~lg~~~a~~~ia~~i~ 393 (396)
T TIGR03492 362 LA-DPELLERCRRNGQERMGPPGASARIAESIL 393 (396)
T ss_pred Hc-CHHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 99 9988888875555444 4444454544433
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.57 E-value=7e-13 Score=125.61 Aligned_cols=298 Identities=10% Similarity=0.007 Sum_probs=169.3
Q ss_pred CCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeecccccccccCcceehhhhchh
Q 012436 48 GGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFG 127 (464)
Q Consensus 48 GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (464)
||.-.-...++++|.+.| ++|..++...+.. .+.....++ .++.+....+.....+..+......+.
T Consensus 12 GGHi~Pala~a~~l~~~g--~~v~~vg~~~~~e-----~~l~~~~g~------~~~~~~~~~l~~~~~~~~~~~~~~~~~ 78 (352)
T PRK12446 12 AGHVTPNLAIIPYLKEDN--WDISYIGSHQGIE-----KTIIEKENI------PYYSISSGKLRRYFDLKNIKDPFLVMK 78 (352)
T ss_pred HHHHHHHHHHHHHHHhCC--CEEEEEECCCccc-----cccCcccCC------cEEEEeccCcCCCchHHHHHHHHHHHH
Confidence 688888899999999988 6666666443211 111111122 333333222111111112223333445
Q ss_pred hhHHHHHHhhhcCCcEEEecccccccch--hhhccCceEEEEeeCCcchhhhhhcccccccccCCCcccccchhhhHHHH
Q 012436 128 SVYLSWEALCKFTPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKI 205 (464)
Q Consensus 128 ~~~~~~~~l~~~~~Dvv~~~~~~~~~~~--~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (464)
...++.+++++++||+||++.++..... .++..++|++++-.+.. ..
T Consensus 79 ~~~~~~~i~~~~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~n~~---------------------------~g---- 127 (352)
T PRK12446 79 GVMDAYVRIRKLKPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESDMT---------------------------PG---- 127 (352)
T ss_pred HHHHHHHHHHhcCCCEEEecCchhhHHHHHHHHHcCCCEEEECCCCC---------------------------cc----
Confidence 6667788899999999998777665322 66689999977333110 00
Q ss_pred HHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCC------CCCCCCCcEEEEEeccC
Q 012436 206 VYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLP------LERSTEYPAIISVAQFR 279 (464)
Q Consensus 206 ~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~------~~~~~~~~~i~~~G~~~ 279 (464)
...+...+.++.+.+.-+...+. ++ .+++.++.+|+..+...... ....+++++++.+|.-.
T Consensus 128 -------~~nr~~~~~a~~v~~~f~~~~~~----~~-~~k~~~tG~Pvr~~~~~~~~~~~~~~~~l~~~~~~iLv~GGS~ 195 (352)
T PRK12446 128 -------LANKIALRFASKIFVTFEEAAKH----LP-KEKVIYTGSPVREEVLKGNREKGLAFLGFSRKKPVITIMGGSL 195 (352)
T ss_pred -------HHHHHHHHhhCEEEEEccchhhh----CC-CCCeEEECCcCCcccccccchHHHHhcCCCCCCcEEEEECCcc
Confidence 11244457888888765443322 22 36788888988765432111 11124456777776655
Q ss_pred CCCChHHHH-HHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHHHhcCcE
Q 012436 280 PEKAHPLQL-EAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVV 358 (464)
Q Consensus 280 ~~K~~~~ll-~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~ 358 (464)
..+.+..++ +++..+.. ++++++..+..+ .++.. ... .++...++. .+++.++|+.||+
T Consensus 196 Ga~~in~~~~~~l~~l~~-------~~~vv~~~G~~~------~~~~~---~~~---~~~~~~~f~-~~~m~~~~~~adl 255 (352)
T PRK12446 196 GAKKINETVREALPELLL-------KYQIVHLCGKGN------LDDSL---QNK---EGYRQFEYV-HGELPDILAITDF 255 (352)
T ss_pred chHHHHHHHHHHHHhhcc-------CcEEEEEeCCch------HHHHH---hhc---CCcEEecch-hhhHHHHHHhCCE
Confidence 555564433 33444421 455555433211 11111 111 134445664 2579999999999
Q ss_pred EEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCc---cc-----eecccCCccceeecC----CHHHHHHHHHHHHcCCHH
Q 012436 359 GIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPK---MD-----IVLEEDGQQTGFLAQ----NAEEYADAIVKIISMPET 426 (464)
Q Consensus 359 ~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~---~~-----~v~~~~~~~~g~~~~----~~~~la~~i~~l~~~~~~ 426 (464)
+|.- +-+.++.|++++|+|.|........ .+ .+.+ .+.+.... +++.+.+++.++++ |++
T Consensus 256 vIsr----~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~---~g~~~~l~~~~~~~~~l~~~l~~ll~-~~~ 327 (352)
T PRK12446 256 VISR----AGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFER---QGYASVLYEEDVTVNSLIKHVEELSH-NNE 327 (352)
T ss_pred EEEC----CChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHH---CCCEEEcchhcCCHHHHHHHHHHHHc-CHH
Confidence 8854 4578899999999999998643110 11 1222 34444432 78999999999998 876
Q ss_pred HHH
Q 012436 427 ERL 429 (464)
Q Consensus 427 ~~~ 429 (464)
.++
T Consensus 328 ~~~ 330 (352)
T PRK12446 328 KYK 330 (352)
T ss_pred HHH
Confidence 653
|
|
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=99.57 E-value=7.1e-13 Score=127.50 Aligned_cols=194 Identities=10% Similarity=0.104 Sum_probs=144.1
Q ss_pred hcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCCCCCCCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhc
Q 012436 220 SCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLD 299 (464)
Q Consensus 220 ~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~ 299 (464)
.+.|.||+.++...+.+.++++...++.++|-|+-.+ + +. .......+++++. +..+++++.+.+..
T Consensus 238 ~~~~~iIv~T~~q~~di~~r~~~~~~~~~ip~g~i~~-~---~~-~~r~~~~~l~~t~-------s~~I~~i~~Lv~~l- 304 (438)
T TIGR02919 238 TRNKKIIIPNKNEYEKIKELLDNEYQEQISQLGYLYP-F---KK-DNKYRKQALILTN-------SDQIEHLEEIVQAL- 304 (438)
T ss_pred cccCeEEeCCHHHHHHHHHHhCcccCceEEEEEEEEe-e---cc-ccCCcccEEEECC-------HHHHHHHHHHHHhC-
Confidence 6789999999999998988887666777777776422 1 11 1123345666662 88899999998887
Q ss_pred CCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhC
Q 012436 300 ADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAG 379 (464)
Q Consensus 300 ~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G 379 (464)
|+++|.| |.+.+. .++|.++ .++ + |++..+.....++.++|..||+++..|..|++++++.||++.|
T Consensus 305 ---Pd~~f~I-ga~te~-----s~kL~~L-~~y--~-nvvly~~~~~~~l~~ly~~~dlyLdin~~e~~~~al~eA~~~G 371 (438)
T TIGR02919 305 ---PDYHFHI-AALTEM-----SSKLMSL-DKY--D-NVKLYPNITTQKIQELYQTCDIYLDINHGNEILNAVRRAFEYN 371 (438)
T ss_pred ---CCcEEEE-EecCcc-----cHHHHHH-Hhc--C-CcEEECCcChHHHHHHHHhccEEEEccccccHHHHHHHHHHcC
Confidence 8999999 877642 2567676 555 4 5554444444589999999999999999999999999999999
Q ss_pred CcEEEeCCCCCccceecccCCccceeecC--CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHccCHHH
Q 012436 380 AIPIAHNSAGPKMDIVLEEDGQQTGFLAQ--NAEEYADAIVKIISMPETERLEMAAAARRRAARFSEQR 446 (464)
Q Consensus 380 ~PvI~~~~~~~~~~~v~~~~~~~~g~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~ 446 (464)
+|+++.+......+++.+ |.+++ ++++|+++|.++++ +++..++.-..-++.+..-+.+.
T Consensus 372 ~pI~afd~t~~~~~~i~~------g~l~~~~~~~~m~~~i~~lL~-d~~~~~~~~~~q~~~a~~~~~~~ 433 (438)
T TIGR02919 372 LLILGFEETAHNRDFIAS------ENIFEHNEVDQLISKLKDLLN-DPNQFRELLEQQREHANDISKEQ 433 (438)
T ss_pred CcEEEEecccCCcccccC------CceecCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHhccCCHHH
Confidence 999999876443555533 55554 99999999999999 99776665555555554445443
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.7e-14 Score=122.27 Aligned_cols=175 Identities=18% Similarity=0.112 Sum_probs=94.1
Q ss_pred EEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeecccccccccC
Q 012436 37 VAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTY 116 (464)
Q Consensus 37 I~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (464)
|++++.+....||+|+++.+++++|.+.|| +|.+++.......... ... ........ ..
T Consensus 1 ili~~~~~~~~GG~e~~~~~l~~~l~~~G~--~v~v~~~~~~~~~~~~-------~~~---------~~~~~~~~---~~ 59 (177)
T PF13439_consen 1 ILITNIFLPNIGGAERVVLNLARALAKRGH--EVTVVSPGVKDPIEEE-------LVK---------IFVKIPYP---IR 59 (177)
T ss_dssp -EEECC-TTSSSHHHHHHHHHHHHHHHTT---EEEEEESS-TTS-SST-------EEE---------E---TT-S---ST
T ss_pred CEEEEecCCCCChHHHHHHHHHHHHHHCCC--EEEEEEcCCCccchhh-------ccc---------eeeeeecc---cc
Confidence 567777777779999999999999999995 5555554331111000 000 00000000 00
Q ss_pred cceehhhhchhhhHHHHHHhhhcCCcEEEecccccccchhhhccCceEEEEeeCCcchhhhhhcccccccccCCCccccc
Q 012436 117 PRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQ 196 (464)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (464)
+. ....+.....+.+.+++.+||+||.+.............++|.+++.|.+.... ...
T Consensus 60 ~~---~~~~~~~~~~~~~~i~~~~~DiVh~~~~~~~~~~~~~~~~~~~v~~~H~~~~~~----~~~-------------- 118 (177)
T PF13439_consen 60 KR---FLRSFFFMRRLRRLIKKEKPDIVHIHGPPAFWIALLACRKVPIVYTIHGPYFER----RFL-------------- 118 (177)
T ss_dssp SS-----HHHHHHHHHHHHHHHHT-SEEECCTTHCCCHHHHHHHCSCEEEEE-HHH--H----HTT--------------
T ss_pred cc---cchhHHHHHHHHHHHHHcCCCeEEecccchhHHHHHhccCCCEEEEeCCCcccc----ccc--------------
Confidence 00 111223345666778888999998766655444332322999999999433100 000
Q ss_pred chhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCC-CCCeEEecCCCCCCCC
Q 012436 197 SNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGL 258 (464)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~-~~~i~~i~~~~d~~~~ 258 (464)
......+.......++...+.+|.++++|+.+++.+.+ ++. +.++.+||||+|.+.|
T Consensus 119 ----~~~~~~~~~~~~~~~~~~~~~~~~ii~vS~~~~~~l~~-~~~~~~ki~vI~ngid~~~F 176 (177)
T PF13439_consen 119 ----KSKLSPYSYLNFRIERKLYKKADRIIAVSESTKDELIK-FGIPPEKIHVIYNGIDTDRF 176 (177)
T ss_dssp ----TTSCCCHHHHHHCTTHHHHCCSSEEEESSHHHHHHHHH-HT--SS-EEE----B-CCCH
T ss_pred ----ccccchhhhhhhhhhhhHHhcCCEEEEECHHHHHHHHH-hCCcccCCEEEECCccHHHc
Confidence 00001111222223345579999999999999999999 776 6899999999999876
|
|
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.7e-11 Score=116.86 Aligned_cols=287 Identities=16% Similarity=0.126 Sum_probs=204.3
Q ss_pred hhhcCC-cEEEecccccccch--hhh-ccCceEEEEeeCCcchhhhhhcccccccccCCCcccccchhhhHHHHHHHHHH
Q 012436 136 LCKFTP-LYYFDTSGYAFTYP--LAR-IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFF 211 (464)
Q Consensus 136 l~~~~~-Dvv~~~~~~~~~~~--~~~-~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (464)
++..++ |+|..+..+...+| +.+ ....++.+++|-|..+.++.+-+. ....+
T Consensus 142 ~~~~~~gDiIWVhDYhL~L~P~mlR~~~~~~~IgfFlHiPfPssEvfr~lP-----------------------~r~eI- 197 (486)
T COG0380 142 VEIYEPGDIIWVHDYHLLLVPQMLRERIPDAKIGFFLHIPFPSSEVFRCLP-----------------------WREEI- 197 (486)
T ss_pred HHhcCCCCEEEEEechhhhhHHHHHHhCCCceEEEEEeCCCCCHHHHhhCc-----------------------hHHHH-
Confidence 333343 77776777667766 333 566788899997765444432221 11111
Q ss_pred HHHHHHHhhcCCEEEEcCHHHHHHHHHHhCC------------------CCCeEEecCCCCCCCCccCCCCC--------
Q 012436 212 SWMYGLVGSCADLAMVNSSWTQSHIEKLWGI------------------PDRIKRVYPPCDTSGLQVLPLER-------- 265 (464)
Q Consensus 212 ~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~------------------~~~i~~i~~~~d~~~~~~~~~~~-------- 265 (464)
-..+-.||.|=..++..++.|...... ..++..+|-|+|+..+.......
T Consensus 198 ----l~gll~~dligFqt~~y~~nF~~~~~r~~~~~~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~e 273 (486)
T COG0380 198 ----LEGLLGADLIGFQTESYARNFLDLCSRLLGVTGDADIRFNGADGRIVKVGAFPIGIDPEEFERALKSPSVQEKVLE 273 (486)
T ss_pred ----HHHhhcCCeeEecCHHHHHHHHHHHHHhccccccccccccccCCceEEEEEEeeecCHHHHHHhhcCCchhhHHHH
Confidence 223467899988888887777543211 13456678888887766322111
Q ss_pred -----CCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHH---HHHHHHHHHh----cC
Q 012436 266 -----STEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEER---LQSLKDKSIE----LK 333 (464)
Q Consensus 266 -----~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~---~~~l~~~~~~----~~ 333 (464)
..+...|+.+.|++.-||+..=+.|++++..++++...++.++-++..+..+.++| ..++++.+.+ +|
T Consensus 274 l~~~~~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG 353 (486)
T COG0380 274 LKAELGRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFG 353 (486)
T ss_pred HHHHhcCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcC
Confidence 13478899999999999999999999999987755555788888887665555443 3344444432 23
Q ss_pred ---CCCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhC----CcEEEeCCCCCccceecccCCccceee
Q 012436 334 ---VDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAG----AIPIAHNSAGPKMDIVLEEDGQQTGFL 406 (464)
Q Consensus 334 ---l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G----~PvI~~~~~~~~~~~v~~~~~~~~g~~ 406 (464)
..+-..+.-.++++++..+|+.||+++.++..+|..++..|+.+|- -|.|.|...|...++ . + .++
T Consensus 354 ~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvakEyVa~q~~~~G~LiLSeFaGaa~~L-~-----~-Ali 426 (486)
T COG0380 354 SLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFAGAASEL-R-----D-ALI 426 (486)
T ss_pred CCCcceeEEEeccCCHHHHHHHHhhhceeeeccccccccHHHHHHHHhhcCCCCcEEEeccccchhhh-c-----c-CEe
Confidence 3334455667899999999999999999999999999999999983 368888877774433 1 2 566
Q ss_pred cC--CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Q 012436 407 AQ--NAEEYADAIVKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIRP 457 (464)
Q Consensus 407 ~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 457 (464)
++ |.++++++|.++++|.++++++.-+..++.+..++...+++.+++-+..
T Consensus 427 VNP~d~~~va~ai~~AL~m~~eEr~~r~~~~~~~v~~~d~~~W~~~fl~~la~ 479 (486)
T COG0380 427 VNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLTHDVARWANSFLDDLAQ 479 (486)
T ss_pred ECCCChHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 65 9999999999999999999888888888888889999999998887765
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=99.51 E-value=5.7e-12 Score=130.58 Aligned_cols=289 Identities=13% Similarity=0.080 Sum_probs=201.7
Q ss_pred hhcCC--cEEEecccccccch--hhh-ccCceEEEEeeCCcchhhhhhcccccccccCCCcccccchhhhHHHHHHHHHH
Q 012436 137 CKFTP--LYYFDTSGYAFTYP--LAR-IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFF 211 (464)
Q Consensus 137 ~~~~~--Dvv~~~~~~~~~~~--~~~-~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (464)
+..++ |+|..|..+...+| +.+ ....++.+++|-|..+.++.+.+.. ...
T Consensus 196 ~~~~~~~d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~eifr~LP~-----------------------r~e-- 250 (854)
T PLN02205 196 EVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPI-----------------------REE-- 250 (854)
T ss_pred HHhCCCCCEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCCCChHHHhhCCc-----------------------HHH--
Confidence 33455 67776777777777 333 5678899999977765555333220 001
Q ss_pred HHHHHHHhhcCCEEEEcCHHHHHHHHH----HhCC----------------CCCeEEecCCCCCCCCccCCCCC------
Q 012436 212 SWMYGLVGSCADLAMVNSSWTQSHIEK----LWGI----------------PDRIKRVYPPCDTSGLQVLPLER------ 265 (464)
Q Consensus 212 ~~~~~~~~~~ad~vi~~S~~~~~~~~~----~~~~----------------~~~i~~i~~~~d~~~~~~~~~~~------ 265 (464)
--..+-.||.|=..+...++.|.+ ..|. .-++.+.|-|+|.+.+.......
T Consensus 251 ---iL~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~~~~~~~~ 327 (854)
T PLN02205 251 ---LLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETEAKV 327 (854)
T ss_pred ---HHHHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcChhHHHHH
Confidence 122346789998888888777754 1121 12345678888887664321110
Q ss_pred -------C-CCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCC---CccHHHHHHHHHHHHh---
Q 012436 266 -------S-TEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRN---KSDEERLQSLKDKSIE--- 331 (464)
Q Consensus 266 -------~-~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~---~~~~~~~~~l~~~~~~--- 331 (464)
. .++.+|+-+.|++..||+..=+.|++++.+++++...++.|+-+...+- .+..++..++.+++.+
T Consensus 328 ~~l~~~~~~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~~~ev~~~v~rIN~ 407 (854)
T PLN02205 328 KELIKQFCDQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHSTVKRINE 407 (854)
T ss_pred HHHHHHhccCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHh
Confidence 1 2468999999999999999999999999998865555667877765332 2233444555555544
Q ss_pred -cCCCC--cEEE-ccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCC-------------------cEEEeCCC
Q 012436 332 -LKVDG--NVEF-YKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGA-------------------IPIAHNSA 388 (464)
Q Consensus 332 -~~l~~--~v~~-~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~-------------------PvI~~~~~ 388 (464)
+|-.+ -|++ ...++.+|+..+|+.||+++.++..+|..++..|+.+|.. .+|.|...
T Consensus 408 ~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gvLiLSEfa 487 (854)
T PLN02205 408 TFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSMLVVSEFI 487 (854)
T ss_pred hcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchheeEEccCccccccccccccccCCCCceEeeecc
Confidence 33221 2444 4778999999999999999999999999999999999853 25666666
Q ss_pred CCccceecccCCccceeecC--CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHh
Q 012436 389 GPKMDIVLEEDGQQTGFLAQ--NAEEYADAIVKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIRPILC 460 (464)
Q Consensus 389 ~~~~~~v~~~~~~~~g~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 460 (464)
|...++ + ..++++ |++++|++|.++++|.+++++...+..++++..++...+++.+++-+++...
T Consensus 488 Gaa~~L------~-~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d~~~W~~~fl~~l~~~~~ 554 (854)
T PLN02205 488 GCSPSL------S-GAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCR 554 (854)
T ss_pred chhHHh------C-cCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHH
Confidence 553333 1 245554 9999999999999988888888888888888889999999999888877643
|
|
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.3e-11 Score=123.76 Aligned_cols=238 Identities=16% Similarity=0.096 Sum_probs=173.6
Q ss_pred HHHHHHhhcCCEEEEcCHHHHHHHHHHhCC--------CCCeEEecCCCCCCCCc-c--------C--------------
Q 012436 213 WMYGLVGSCADLAMVNSSWTQSHIEKLWGI--------PDRIKRVYPPCDTSGLQ-V--------L-------------- 261 (464)
Q Consensus 213 ~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~--------~~~i~~i~~~~d~~~~~-~--------~-------------- 261 (464)
.|.+..++.|+.+-++|+-..+..++.+.. ..++.-|-||++...+. + .
T Consensus 343 nM~~laL~~S~~vNgVS~lHg~vsr~mf~~~~~g~p~~~~~i~~ITNGVh~~~W~~P~~~~l~~~~~g~~w~~~~~~~~~ 422 (778)
T cd04299 343 NMAVLALRLAQRANGVSRLHGEVSREMFAGLWPGFPVEEVPIGHVTNGVHVPTWVAPEMRELYDRYLGGDWRERPTDPEL 422 (778)
T ss_pred eHHHHHHHhcCeeeeecHHHHHHHHHHhhhhhccCCcccCceeceeCCcchhhhcCHHHHHHHHHhcCcchhhccchHHH
Confidence 456778899999999999885555553321 34578899999876554 0 0
Q ss_pred -------CC-----------------------------------------CCCCCCcEEEEEeccCCCCChHHHHHHHHH
Q 012436 262 -------PL-----------------------------------------ERSTEYPAIISVAQFRPEKAHPLQLEAFSV 293 (464)
Q Consensus 262 -------~~-----------------------------------------~~~~~~~~i~~~G~~~~~K~~~~ll~a~~~ 293 (464)
+. ...++.++++|++|+...|+.++++..+.+
T Consensus 423 ~~~~~~i~d~~lw~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~~~~~ldpd~ltigfarRfa~YKR~~Lil~dl~r 502 (778)
T cd04299 423 WEAVDDIPDEELWEVRQQLRRRLIEFVRRRLRRQWLRRGASAEEIGEADDVLDPNVLTIGFARRFATYKRATLLLRDPER 502 (778)
T ss_pred HhhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCchhhhhhcCCccCCCccEEeeeecchhhhhHHHHHHHHHH
Confidence 00 011233489999999999999999999888
Q ss_pred HHHHhcCCCCCcEEEEEcCCCCCc--cHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHHHhcCcEEEEcCC--CCCCC
Q 012436 294 ALRKLDADLPRPRLQFVGSCRNKS--DEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMI--DEHFG 369 (464)
Q Consensus 294 l~~~~~~~~p~~~l~i~G~~~~~~--~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~--~e~~~ 369 (464)
+.+-..+...++++++.|.+...+ ..++.+.+.+.+++...+++|.|+...+-+--..+++.||+.++||. .|.+|
T Consensus 503 l~~il~~~~~pvQ~IfaGKAhP~d~~gK~iIk~i~~~a~~p~~~~kVvfle~Yd~~lA~~LvaG~DvwLn~prrp~EAsG 582 (778)
T cd04299 503 LKRLLNDPERPVQFIFAGKAHPADEPGKELIQEIVEFSRRPEFRGRIVFLEDYDMALARHLVQGVDVWLNTPRRPLEASG 582 (778)
T ss_pred HHHHhhCCCCCeEEEEEEecCccchHHHHHHHHHHHHHhCcCCCCcEEEEcCCCHHHHHHHHhhhhhcccCCCCCCCCCc
Confidence 865321100269999999874322 24566677777775566779999988888888889999999999998 99999
Q ss_pred hHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecCC--------------HHHHHHHHHH-HH---cCC-----HH
Q 012436 370 ISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQN--------------AEEYADAIVK-II---SMP-----ET 426 (464)
Q Consensus 370 ~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~~--------------~~~la~~i~~-l~---~~~-----~~ 426 (464)
++-+-||..|.+-+++--|-. .|.. + +.+||.+++ .++|.+.|++ ++ -.. |.
T Consensus 583 TSgMKA~~NG~LnlSvlDGww-~E~~-~---g~nGwaig~~~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~ 657 (778)
T cd04299 583 TSGMKAALNGGLNLSVLDGWW-DEGY-D---GENGWAIGDGDEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPP 657 (778)
T ss_pred cchHHHHHcCCeeeecccCcc-cccc-C---CCCceEeCCCccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCH
Confidence 999999999999998876654 4544 4 688988742 3445555533 22 102 66
Q ss_pred HHHHHHHHHHHHH-HccCHHHHHHHHHHHH
Q 012436 427 ERLEMAAAARRRA-ARFSEQRFYEDFKAAI 455 (464)
Q Consensus 427 ~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~ 455 (464)
...++.+++.+.+ ..|||+.++++|.+-+
T Consensus 658 ~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~ 687 (778)
T cd04299 658 GWVAMMKHSMATLGPRFSAERMVREYVERF 687 (778)
T ss_pred HHHHHHHHHHHhcccCCCHHHHHHHHHHHh
Confidence 7888888888877 8999999999987654
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.7e-13 Score=102.28 Aligned_cols=91 Identities=22% Similarity=0.282 Sum_probs=83.4
Q ss_pred EEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecCCHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 012436 358 VGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQNAEEYADAIVKIISMPETERLEMAAAARR 437 (464)
Q Consensus 358 ~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~ 437 (464)
+++.|+..++++..++|+||||+|+|+++.++. .+++.+ +..++.++|++++.+++..+++ ||+.++++++++++
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~-~~~~~~---~~~~~~~~~~~el~~~i~~ll~-~~~~~~~ia~~a~~ 75 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGL-REIFED---GEHIITYNDPEELAEKIEYLLE-NPEERRRIAKNARE 75 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCCeEEECChHHH-HHHcCC---CCeEEEECCHHHHHHHHHHHHC-CHHHHHHHHHHHHH
Confidence 357788889999999999999999999998877 677877 7789999999999999999999 99999999999999
Q ss_pred HH-HccCHHHHHHHHHH
Q 012436 438 RA-ARFSEQRFYEDFKA 453 (464)
Q Consensus 438 ~~-~~~s~~~~~~~~~~ 453 (464)
.+ ++|+|++.++++++
T Consensus 76 ~v~~~~t~~~~~~~il~ 92 (92)
T PF13524_consen 76 RVLKRHTWEHRAEQILE 92 (92)
T ss_pred HHHHhCCHHHHHHHHHC
Confidence 99 89999999998863
|
|
| >COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.46 E-value=2e-10 Score=109.06 Aligned_cols=347 Identities=13% Similarity=0.092 Sum_probs=215.6
Q ss_pred cccccceEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeeccc
Q 012436 30 RRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRK 109 (464)
Q Consensus 30 ~~~~~mkI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (464)
+..+++||+|++..+... .....+..+.+.+.+.. .+|..|.... ...+...+++.. .+ .+
T Consensus 255 ~~~~rlRvGylS~dlr~H-avg~l~~~v~e~hDRdk--fEvfay~~g~-~~~dal~~rI~a----~~-----------~~ 315 (620)
T COG3914 255 RNGKRLRVGYLSSDLRSH-AVGFLLRWVFEYHDRDK--FEVFAYSLGP-PHTDALQERISA----AV-----------EK 315 (620)
T ss_pred ccccceeEEEeccccccc-hHHHHHHHHHHHhchhh--eEEEEEecCC-CCchhHHHHHHH----hh-----------hh
Confidence 556789999999999888 66677777788887776 5555554331 111222222211 11 12
Q ss_pred ccccccCcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccc--hhhhccCceEEEEee-CCcchhhhhhccccccc
Q 012436 110 WIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTY--PLARIFGCRVICYTH-YPTISLDMISRVREGSS 186 (464)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~--~~~~~~~~p~v~~~h-~p~~~~~~~~~~~~~~~ 186 (464)
|.+.... ....+...++....||.++..++.... .+...+-.|+.+++- +|... .....
T Consensus 316 ~~~~~~~-----------dd~e~a~~I~~d~IdILvDl~g~T~d~r~~v~A~RpAPiqvswlGy~aT~-------g~p~~ 377 (620)
T COG3914 316 WYPIGRM-----------DDAEIANAIRTDGIDILVDLDGHTVDTRCQVFAHRPAPIQVSWLGYPATT-------GSPNM 377 (620)
T ss_pred eeccCCc-----------CHHHHHHHHHhcCCeEEEeccCceeccchhhhhcCCCceEEeeccccccc-------CCCcc
Confidence 2211100 122344557888999999766655432 355566778866555 33210 00000
Q ss_pred ccCCCcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCc-----cC
Q 012436 187 MYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQ-----VL 261 (464)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~-----~~ 261 (464)
. +--+|..+.+ +...+++.+..-. +--.+-|.|-...- +.
T Consensus 378 D-------------------------------Y~I~D~y~vP-p~ae~yysEkl~R---Lp~cy~p~d~~~~v~p~~sR~ 422 (620)
T COG3914 378 D-------------------------------YFISDPYTVP-PTAEEYYSEKLWR---LPQCYQPVDGFEPVTPPPSRA 422 (620)
T ss_pred e-------------------------------EEeeCceecC-chHHHHHHHHHHh---cccccCCCCCcccCCCCcchh
Confidence 0 0224555555 6666666655321 11112233221111 11
Q ss_pred CCCCCCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCC-CcEEE
Q 012436 262 PLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVD-GNVEF 340 (464)
Q Consensus 262 ~~~~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~-~~v~~ 340 (464)
....+++. ++|+..-...|-...+++...++.+.. |+-.|++.|.|+ +++....+++++++.|+. +++.|
T Consensus 423 ~lglp~~a--vVf~c~~n~~K~~pev~~~wmqIL~~v----P~Svl~L~~~~~---~~~~~~~l~~la~~~Gv~~eRL~f 493 (620)
T COG3914 423 QLGLPEDA--VVFCCFNNYFKITPEVFALWMQILSAV----PNSVLLLKAGGD---DAEINARLRDLAEREGVDSERLRF 493 (620)
T ss_pred hcCCCCCe--EEEEecCCcccCCHHHHHHHHHHHHhC----CCcEEEEecCCC---cHHHHHHHHHHHHHcCCChhheee
Confidence 11222343 344443477788888888888888877 789999999885 346778999999999984 68999
Q ss_pred ccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCc----cceecccCCccceeecCCHHHHHHH
Q 012436 341 YKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPK----MDIVLEEDGQQTGFLAQNAEEYADA 416 (464)
Q Consensus 341 ~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~----~~~v~~~~~~~~g~~~~~~~~la~~ 416 (464)
.+..+.++..+.|.-||+++-+ +.-+...+..|++.+|+|||+-.-.... ..++... |-.-+++++.++..+.
T Consensus 494 ~p~~~~~~h~a~~~iADlvLDT-yPY~g~TTa~daLwm~vPVlT~~G~~FasR~~~si~~~a--gi~e~vA~s~~dYV~~ 570 (620)
T COG3914 494 LPPAPNEDHRARYGIADLVLDT-YPYGGHTTASDALWMGVPVLTRVGEQFASRNGASIATNA--GIPELVADSRADYVEK 570 (620)
T ss_pred cCCCCCHHHHHhhchhheeeec-ccCCCccchHHHHHhcCceeeeccHHHHHhhhHHHHHhc--CCchhhcCCHHHHHHH
Confidence 9999999999999999999866 4556678899999999999974211110 1233220 2333566777777777
Q ss_pred HHHHHcCCHHHHHHHHHHHHHHH-H--ccCHHHHHHHHHHHHHHHHhh
Q 012436 417 IVKIISMPETERLEMAAAARRRA-A--RFSEQRFYEDFKAAIRPILCH 461 (464)
Q Consensus 417 i~~l~~~~~~~~~~~~~~~~~~~-~--~~s~~~~~~~~~~~~~~~~~~ 461 (464)
-..+-. |...+++.+..-++.. . -|+.+.+++++..+|.++.+.
T Consensus 571 av~~g~-dral~q~~r~~l~~~r~tspL~d~~~far~le~~y~~M~~~ 617 (620)
T COG3914 571 AVAFGS-DRALRQQVRAELKRSRQTSPLFDPKAFARKLETLYWGMWSE 617 (620)
T ss_pred HHHhcc-cHHHHHhhHHHHHhccccCcccCHHHHHHHHHHHHHHHHHh
Confidence 777777 7777776665554444 2 599999999999999998764
|
|
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=99.33 E-value=5.3e-12 Score=105.97 Aligned_cols=156 Identities=19% Similarity=0.100 Sum_probs=82.8
Q ss_pred CCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeecccccccccCcceehhhhchh
Q 012436 48 GGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFG 127 (464)
Q Consensus 48 GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (464)
||+++++.+++++|.+.||+ |.+++...+....+ ....++.+..++..... . ....+.
T Consensus 1 GG~~~~~~~l~~~L~~~G~~--V~v~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~----~-----~~~~~~ 58 (160)
T PF13579_consen 1 GGIERYVRELARALAARGHE--VTVVTPQPDPEDDE-----------EEEDGVRVHRLPLPRRP----W-----PLRLLR 58 (160)
T ss_dssp SHHHHHHHHHHHHHHHTT-E--EEEEEE---GGG-S-----------EEETTEEEEEE--S-SS----S-----GGGHCC
T ss_pred CCHHHHHHHHHHHHHHCCCE--EEEEecCCCCcccc-----------cccCCceEEeccCCccc----h-----hhhhHH
Confidence 79999999999999999954 44555432111000 00112244444332111 0 111122
Q ss_pred hhHHHHHHh--hhcCCcEEEecccccccch-hhh-ccCceEEEEeeCCcchhhhhhcccccccccCCCcccccchhhhHH
Q 012436 128 SVYLSWEAL--CKFTPLYYFDTSGYAFTYP-LAR-IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQC 203 (464)
Q Consensus 128 ~~~~~~~~l--~~~~~Dvv~~~~~~~~~~~-~~~-~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (464)
....+.+.+ ++.+||+||++........ +++ ..++|+|+++|.... ...
T Consensus 59 ~~~~~~~~l~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~---------------------------~~~ 111 (160)
T PF13579_consen 59 FLRRLRRLLAARRERPDVVHAHSPTAGLVAALARRRRGIPLVVTVHGTLF---------------------------RRG 111 (160)
T ss_dssp HHHHHHHHCHHCT---SEEEEEHHHHHHHHHHHHHHHT--EEEE-SS-T-------------------------------
T ss_pred HHHHHHHHHhhhccCCeEEEecccchhHHHHHHHHccCCcEEEEECCCch---------------------------hhc
Confidence 344455556 7889999998775433322 444 789999999993210 000
Q ss_pred HHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCC
Q 012436 204 KIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPP 252 (464)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~ 252 (464)
.....+.+.++++..++.+|.++++|+..++.+.+.+..++++.+||||
T Consensus 112 ~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~l~~~g~~~~ri~vipnG 160 (160)
T PF13579_consen 112 SRWKRRLYRWLERRLLRRADRVIVVSEAMRRYLRRYGVPPDRIHVIPNG 160 (160)
T ss_dssp --HHHHHHHHHHHHHHHH-SEEEESSHHHHHHHHHH---GGGEEE----
T ss_pred cchhhHHHHHHHHHHHhcCCEEEECCHHHHHHHHHhCCCCCcEEEeCcC
Confidence 2223344466788899999999999999999999954336899999997
|
|
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.3e-09 Score=104.17 Aligned_cols=173 Identities=17% Similarity=0.194 Sum_probs=118.1
Q ss_pred EEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCC-CcEEEccCCChhHHHH
Q 012436 273 ISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVD-GNVEFYKNLLYRDLVK 351 (464)
Q Consensus 273 ~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~-~~v~~~g~~~~~~~~~ 351 (464)
+|..--...|--+..++++.++.++. |+.+|++...... ..+.+++.+.+.|+. +++.|.+..+.++...
T Consensus 287 vF~~fn~~~KI~p~~l~~W~~IL~~v----P~S~L~L~~~~~~-----~~~~l~~~~~~~Gv~~~Ri~f~~~~~~~ehl~ 357 (468)
T PF13844_consen 287 VFGSFNNLFKISPETLDLWARILKAV----PNSRLWLLRFPAS-----GEARLRRRFAAHGVDPDRIIFSPVAPREEHLR 357 (468)
T ss_dssp EEEE-S-GGG--HHHHHHHHHHHHHS----TTEEEEEEETSTT-----HHHHHHHHHHHTTS-GGGEEEEE---HHHHHH
T ss_pred EEEecCccccCCHHHHHHHHHHHHhC----CCcEEEEeeCCHH-----HHHHHHHHHHHcCCChhhEEEcCCCCHHHHHH
Confidence 33333366788889999999999988 7899988765432 236788888899986 6899999999999999
Q ss_pred HHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccc----eecccCCccceeecCCHHHHHHHHHHHHcCCHHH
Q 012436 352 LLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMD----IVLEEDGQQTGFLAQNAEEYADAIVKIISMPETE 427 (464)
Q Consensus 352 ~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~----~v~~~~~~~~g~~~~~~~~la~~i~~l~~~~~~~ 427 (464)
.++.+|+++-+ ..-+.+.+.+||+.+|+|||+-........ ++... |-..+++.|.+++.+.-.++.+ |++.
T Consensus 358 ~~~~~DI~LDT-~p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~l--Gl~ElIA~s~~eYv~~Av~La~-D~~~ 433 (468)
T PF13844_consen 358 RYQLADICLDT-FPYNGGTTTLDALWMGVPVVTLPGETMASRVGASILRAL--GLPELIADSEEEYVEIAVRLAT-DPER 433 (468)
T ss_dssp HGGG-SEEE---SSS--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHH--T-GGGB-SSHHHHHHHHHHHHH--HHH
T ss_pred HhhhCCEEeeC-CCCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHc--CCchhcCCCHHHHHHHHHHHhC-CHHH
Confidence 99999999987 445568899999999999998763322111 11110 2233566799999999999999 9999
Q ss_pred HHHHHHHHHHHH---HccCHHHHHHHHHHHHHHH
Q 012436 428 RLEMAAAARRRA---ARFSEQRFYEDFKAAIRPI 458 (464)
Q Consensus 428 ~~~~~~~~~~~~---~~~s~~~~~~~~~~~~~~~ 458 (464)
+++++++.++.. .-|+...+++++++.|+++
T Consensus 434 l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~m 467 (468)
T PF13844_consen 434 LRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQM 467 (468)
T ss_dssp HHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHh
Confidence 999999888765 3499999999999999876
|
|
| >PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.5e-10 Score=109.23 Aligned_cols=307 Identities=15% Similarity=0.100 Sum_probs=157.5
Q ss_pred ceEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeecccccccc
Q 012436 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (464)
Q Consensus 35 mkI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (464)
|||+|..... |-|.-.....++++| +|| +|.+++... ...+. ...+...-..+.....-...-.....
T Consensus 1 MkIl~~v~~~--G~GH~~R~~~la~~L--rg~--~v~~~~~~~---~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (318)
T PF13528_consen 1 MKILFYVQGH--GLGHASRCLALARAL--RGH--EVTFITSGP---APEFL---KPRFPVREIPGLGPIQENGRLDRWKT 68 (318)
T ss_pred CEEEEEeCCC--CcCHHHHHHHHHHHH--ccC--ceEEEEcCC---cHHHh---ccccCEEEccCceEeccCCccchHHH
Confidence 8999987664 557888888999999 475 444554432 11222 11121110011111110000000000
Q ss_pred cCcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccchhhhccCceEEEEeeCCcchhhhhhcccccccccCCCccc
Q 012436 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASI 194 (464)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~ 194 (464)
......+............+.+++++||+|++-.. +.....++..++|.+...|...... +.
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~l~~~~pDlVIsD~~-~~~~~aa~~~giP~i~i~~~~~~~~------------~~----- 130 (318)
T PF13528_consen 69 VRNNIRWLARLARRIRREIRWLREFRPDLVISDFY-PLAALAARRAGIPVIVISNQYWFLH------------PN----- 130 (318)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEcCh-HHHHHHHHhcCCCEEEEEehHHccc------------cc-----
Confidence 00000000111223344556688899999984322 2222367789999998888221000 00
Q ss_pred ccchhhhHHHHHHHHHHHHHHHH-HhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCCCCCCCCCcEEE
Q 012436 195 AQSNWLSQCKIVYYTFFSWMYGL-VGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAII 273 (464)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~~~~~~~~~~i~ 273 (464)
.+.. ..........++... ....++..+..+-... . ....+..++++......... ...+.+.+++
T Consensus 131 ---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~----~~~~~~~~~~p~~~~~~~~~---~~~~~~~iLv 197 (318)
T PF13528_consen 131 ---FWLP-WDQDFGRLIERYIDRYHFPPADRRLALSFYPP--L----PPFFRVPFVGPIIRPEIREL---PPEDEPKILV 197 (318)
T ss_pred ---CCcc-hhhhHHHHHHHhhhhccCCcccceecCCcccc--c----cccccccccCchhccccccc---CCCCCCEEEE
Confidence 0000 000111111212221 1345555555443311 0 00222333444443332221 1224557889
Q ss_pred EEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHHH
Q 012436 274 SVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLL 353 (464)
Q Consensus 274 ~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l 353 (464)
++|..... .++++++.+ |+..++++|..... .. .+||++.++. ..++.++|
T Consensus 198 ~~gg~~~~----~~~~~l~~~--------~~~~~~v~g~~~~~------~~----------~~ni~~~~~~-~~~~~~~m 248 (318)
T PF13528_consen 198 YFGGGGPG----DLIEALKAL--------PDYQFIVFGPNAAD------PR----------PGNIHVRPFS-TPDFAELM 248 (318)
T ss_pred EeCCCcHH----HHHHHHHhC--------CCCeEEEEcCCccc------cc----------CCCEEEeecC-hHHHHHHH
Confidence 99976554 556666654 57889999765311 00 4689988863 37899999
Q ss_pred hcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccce-----ecccCCccceeecC----CHHHHHHHHHHH
Q 012436 354 GGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDI-----VLEEDGQQTGFLAQ----NAEEYADAIVKI 420 (464)
Q Consensus 354 ~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~-----v~~~~~~~~g~~~~----~~~~la~~i~~l 420 (464)
+.||++|.-. .-.++.|++++|+|+|+-...+..+.. +.+ .+.|...+ +++.+++.|+++
T Consensus 249 ~~ad~vIs~~----G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~---~G~~~~~~~~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 249 AAADLVISKG----GYTTISEALALGKPALVIPRPGQDEQEYNARKLEE---LGLGIVLSQEDLTPERLAEFLERL 317 (318)
T ss_pred HhCCEEEECC----CHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHH---CCCeEEcccccCCHHHHHHHHhcC
Confidence 9999999652 233599999999999998876542332 222 34444432 778888887653
|
|
| >PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases | Back alignment and domain information |
|---|
Probab=99.19 E-value=6.4e-10 Score=93.08 Aligned_cols=175 Identities=15% Similarity=0.067 Sum_probs=108.7
Q ss_pred ceEEEecCCC-CC-CCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeecccccc
Q 012436 35 TSVAFFHPNT-ND-GGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIE 112 (464)
Q Consensus 35 mkI~~~~~~~-~~-~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (464)
.||+++-.-. |. .||-|+++.+|+..|++.| +++.+++........ .....|+ +.+.++....
T Consensus 2 kkIaIiGtrGIPa~YGGfET~ve~L~~~l~~~g--~~v~Vyc~~~~~~~~-----~~~y~gv------~l~~i~~~~~-- 66 (185)
T PF09314_consen 2 KKIAIIGTRGIPARYGGFETFVEELAPRLVSKG--IDVTVYCRSDYYPYK-----EFEYNGV------RLVYIPAPKN-- 66 (185)
T ss_pred ceEEEEeCCCCCcccCcHHHHHHHHHHHHhcCC--ceEEEEEccCCCCCC-----CcccCCe------EEEEeCCCCC--
Confidence 5788886543 32 3999999999999999999 566666654321111 0111122 4444433221
Q ss_pred cccCcceehhhhchhhhHHHHHHhhh--cCCcEEEecccc--cccchhhh---ccCceEEEEeeCCcchhhhhhcccccc
Q 012436 113 ESTYPRFTMIGQSFGSVYLSWEALCK--FTPLYYFDTSGY--AFTYPLAR---IFGCRVICYTHYPTISLDMISRVREGS 185 (464)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~Dvv~~~~~~--~~~~~~~~---~~~~p~v~~~h~p~~~~~~~~~~~~~~ 185 (464)
.....+...+.++..+.+..+. .+.|+++..... ++..++.+ ..|.|+++..|..+.
T Consensus 67 ----g~~~si~yd~~sl~~al~~~~~~~~~~~ii~ilg~~~g~~~~~~~r~~~~~g~~v~vN~DGlEW------------ 130 (185)
T PF09314_consen 67 ----GSAESIIYDFLSLLHALRFIKQDKIKYDIILILGYGIGPFFLPFLRKLRKKGGKVVVNMDGLEW------------ 130 (185)
T ss_pred ----CchHHHHHHHHHHHHHHHHHhhccccCCEEEEEcCCccHHHHHHHHhhhhcCCcEEECCCcchh------------
Confidence 1111222223333344333333 367887744433 33445444 346689998774431
Q ss_pred cccCCCcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCC
Q 012436 186 SMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCD 254 (464)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d 254 (464)
...++....++++.+.|+.+.+.+|.+|+.|+..++++++.|+ ..+..+|++|.|
T Consensus 131 -------------kR~KW~~~~k~~lk~~E~~avk~ad~lIaDs~~I~~y~~~~y~-~~~s~~IaYGad 185 (185)
T PF09314_consen 131 -------------KRAKWGRPAKKYLKFSEKLAVKYADRLIADSKGIQDYIKERYG-RKKSTFIAYGAD 185 (185)
T ss_pred -------------hhhhcCHHHHHHHHHHHHHHHHhCCEEEEcCHHHHHHHHHHcC-CCCcEEecCCCC
Confidence 1234445667778888999999999999999999999999996 478888999976
|
|
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.3e-08 Score=98.92 Aligned_cols=109 Identities=16% Similarity=0.058 Sum_probs=73.0
Q ss_pred CCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCcc---ceecccCCccceeecC---
Q 012436 335 DGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKM---DIVLEEDGQQTGFLAQ--- 408 (464)
Q Consensus 335 ~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~---~~v~~~~~~~~g~~~~--- 408 (464)
++++.+.+++|+. +++..||++|..+ | ..+++||+++|+|+|+....+.-. ..+.. .+.|...+
T Consensus 274 ~~~v~~~~~~p~~---~ll~~~~~~I~hg---G-~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~---~g~g~~l~~~~ 343 (392)
T TIGR01426 274 PPNVEVRQWVPQL---EILKKADAFITHG---G-MNSTMEALFNGVPMVAVPQGADQPMTARRIAE---LGLGRHLPPEE 343 (392)
T ss_pred CCCeEEeCCCCHH---HHHhhCCEEEECC---C-chHHHHHHHhCCCEEecCCcccHHHHHHHHHH---CCCEEEecccc
Confidence 5789999999764 5789999998652 2 348999999999999976553311 11223 34554442
Q ss_pred -CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHH
Q 012436 409 -NAEEYADAIVKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAA 454 (464)
Q Consensus 409 -~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 454 (464)
++++++++|.++++ |++.++++.+-+.+....-..+..++.+.++
T Consensus 344 ~~~~~l~~ai~~~l~-~~~~~~~~~~l~~~~~~~~~~~~aa~~i~~~ 389 (392)
T TIGR01426 344 VTAEKLREAVLAVLS-DPRYAERLRKMRAEIREAGGARRAADEIEGF 389 (392)
T ss_pred CCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHh
Confidence 78999999999999 8875555543333333445555555555444
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=99.18 E-value=2.4e-08 Score=95.32 Aligned_cols=268 Identities=13% Similarity=0.075 Sum_probs=150.1
Q ss_pred hhhHHHHHHhhhcCCcEEEecccccccch---hhhccCceEEEEeeCCcchhhhhhcccccccccCCCcccccchhhhHH
Q 012436 127 GSVYLSWEALCKFTPLYYFDTSGYAFTYP---LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQC 203 (464)
Q Consensus 127 ~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~---~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (464)
.....+.+.+.+.+||+|+.+......++ .+...++|++. +|....+.+ ..
T Consensus 80 ~~~~~~~~~~~~~~Pd~vlv~GD~~~~la~alaA~~~~IPv~H-veaG~rs~~-------------------------~~ 133 (365)
T TIGR03568 80 LTIIGFSDAFERLKPDLVVVLGDRFEMLAAAIAAALLNIPIAH-IHGGEVTEG-------------------------AI 133 (365)
T ss_pred HHHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHhCCcEEE-EECCccCCC-------------------------Cc
Confidence 33556667788999998886553322222 55589999973 342111000 00
Q ss_pred HHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCC-CCCCCcc-CC-------CCCCCC-CcEEE
Q 012436 204 KIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPC-DTSGLQV-LP-------LERSTE-YPAII 273 (464)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~-d~~~~~~-~~-------~~~~~~-~~~i~ 273 (464)
.-.. .+.+-+.++..++.++..++.+.+.+-.+.++.++.|+. |.-.... .. ...+.+ +..++
T Consensus 134 eE~~-------r~~i~~la~l~f~~t~~~~~~L~~eg~~~~~i~~tG~~~iD~l~~~~~~~~~~~~~~lgl~~~~~~vlv 206 (365)
T TIGR03568 134 DESI-------RHAITKLSHLHFVATEEYRQRVIQMGEDPDRVFNVGSPGLDNILSLDLLSKEELEEKLGIDLDKPYALV 206 (365)
T ss_pred hHHH-------HHHHHHHHhhccCCCHHHHHHHHHcCCCCCcEEEECCcHHHHHHhhhccCHHHHHHHhCCCCCCCEEEE
Confidence 0000 122336667888899999998887643366787776643 3211000 00 001112 33333
Q ss_pred EEeccC--CCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHH
Q 012436 274 SVAQFR--PEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVK 351 (464)
Q Consensus 274 ~~G~~~--~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~ 351 (464)
.+-+-. .....+.+.+.++.+.... .++.++.-..++. .....+.+++...+ .+++.+.+.++..++..
T Consensus 207 t~Hp~~~~~~~~~~~l~~li~~L~~~~----~~~~vi~P~~~p~--~~~i~~~i~~~~~~---~~~v~l~~~l~~~~~l~ 277 (365)
T TIGR03568 207 TFHPVTLEKESAEEQIKELLKALDELN----KNYIFTYPNADAG--SRIINEAIEEYVNE---HPNFRLFKSLGQERYLS 277 (365)
T ss_pred EeCCCcccccCchHHHHHHHHHHHHhc----cCCEEEEeCCCCC--chHHHHHHHHHhcC---CCCEEEECCCChHHHHH
Confidence 333322 3333344444444443332 1443322122221 21223344444221 35899999999999999
Q ss_pred HHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC-CHHHHHHHHHHHHcCCHHHHHH
Q 012436 352 LLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ-NAEEYADAIVKIISMPETERLE 430 (464)
Q Consensus 352 ~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~-~~~~la~~i~~l~~~~~~~~~~ 430 (464)
+++.|+++|..| +..+.||.++|+|+|.-. . ..+.+.. +.+++.++ |++++.+++.++. +++.++.
T Consensus 278 Ll~~a~~vitdS-----Sggi~EA~~lg~Pvv~l~--~-R~e~~~~---g~nvl~vg~~~~~I~~a~~~~~--~~~~~~~ 344 (365)
T TIGR03568 278 LLKNADAVIGNS-----SSGIIEAPSFGVPTINIG--T-RQKGRLR---ADSVIDVDPDKEEIVKAIEKLL--DPAFKKS 344 (365)
T ss_pred HHHhCCEEEEcC-----hhHHHhhhhcCCCEEeec--C-Cchhhhh---cCeEEEeCCCHHHHHHHHHHHh--ChHHHHH
Confidence 999999999543 123489999999999654 2 3666666 67777677 9999999999954 4433222
Q ss_pred HHHHHHHHH-HccCHHHHHHHHHHH
Q 012436 431 MAAAARRRA-ARFSEQRFYEDFKAA 454 (464)
Q Consensus 431 ~~~~~~~~~-~~~s~~~~~~~~~~~ 454 (464)
+ ... ..|...+.++++.++
T Consensus 345 ~-----~~~~~pygdg~as~rI~~~ 364 (365)
T TIGR03568 345 L-----KNVKNPYGDGNSSERIIEI 364 (365)
T ss_pred H-----hhCCCCCCCChHHHHHHHh
Confidence 2 112 446666666666654
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.18 E-value=3.4e-08 Score=90.83 Aligned_cols=352 Identities=15% Similarity=0.083 Sum_probs=209.6
Q ss_pred ccceEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeecccccc
Q 012436 33 RTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIE 112 (464)
Q Consensus 33 ~~mkI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (464)
.+|||+++...-+.. .-+.-+++++.+.+.-...++.|+.+. ..++.+...+.+++.-++ +.+...
T Consensus 2 ~~~Kv~~I~GTRPE~----iKmapli~~~~~~~~~~~~vi~TGQH~--d~em~~~~le~~~i~~pd----y~L~i~---- 67 (383)
T COG0381 2 KMLKVLTIFGTRPEA----IKMAPLVKALEKDPDFELIVIHTGQHR--DYEMLDQVLELFGIRKPD----YDLNIM---- 67 (383)
T ss_pred CceEEEEEEecCHHH----HHHhHHHHHHHhCCCCceEEEEecccc--cHHHHHHHHHHhCCCCCC----cchhcc----
Confidence 568899886544322 234567788888762223344455431 125566666666664211 111110
Q ss_pred cccCcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccch---hhhccCceEEEEeeCCcchhhhhhcccccccccC
Q 012436 113 ESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP---LARIFGCRVICYTHYPTISLDMISRVREGSSMYN 189 (464)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~---~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~ 189 (464)
.+........-..+..+.+.+.+.+||+|..+......+. .+...++|+..--- ...+.+. |
T Consensus 68 ---~~~~tl~~~t~~~i~~~~~vl~~~kPD~VlVhGDT~t~lA~alaa~~~~IpV~HvEA-GlRt~~~----------~- 132 (383)
T COG0381 68 ---KPGQTLGEITGNIIEGLSKVLEEEKPDLVLVHGDTNTTLAGALAAFYLKIPVGHVEA-GLRTGDL----------Y- 132 (383)
T ss_pred ---ccCCCHHHHHHHHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHHHhCCceEEEec-ccccCCC----------C-
Confidence 0011111111123445566688999997764444333322 44478888743211 1100000 0
Q ss_pred CCcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCC----------CCc
Q 012436 190 NNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTS----------GLQ 259 (464)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~----------~~~ 259 (464)
|.... ..+.+-.-+|.-+++++..++.+.+.+-.+++++++.|.+-.. ...
T Consensus 133 ---------~PEE~----------NR~l~~~~S~~hfapte~ar~nLl~EG~~~~~IfvtGnt~iDal~~~~~~~~~~~~ 193 (383)
T COG0381 133 ---------FPEEI----------NRRLTSHLSDLHFAPTEIARKNLLREGVPEKRIFVTGNTVIDALLNTRDRVLEDSK 193 (383)
T ss_pred ---------CcHHH----------HHHHHHHhhhhhcCChHHHHHHHHHcCCCccceEEeCChHHHHHHHHHhhhccchh
Confidence 00000 0123336678889999999999998854466799988864110 000
Q ss_pred cC-C-CCCCCCCcEEEEEeccCCC-CChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHH-HhcCCC
Q 012436 260 VL-P-LERSTEYPAIISVAQFRPE-KAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKS-IELKVD 335 (464)
Q Consensus 260 ~~-~-~~~~~~~~~i~~~G~~~~~-K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~-~~~~l~ 335 (464)
.. . .....++..++.+-|.+.. +++..+++++.++..+. |++.++.--... ..+++.. +.++-.
T Consensus 194 ~~~~~~~~~~~~~iLvT~HRreN~~~~~~~i~~al~~i~~~~----~~~~viyp~H~~--------~~v~e~~~~~L~~~ 261 (383)
T COG0381 194 ILAKGLDDKDKKYILVTAHRRENVGEPLEEICEALREIAEEY----PDVIVIYPVHPR--------PRVRELVLKRLKNV 261 (383)
T ss_pred hHHhhhccccCcEEEEEcchhhcccccHHHHHHHHHHHHHhC----CCceEEEeCCCC--------hhhhHHHHHHhCCC
Confidence 00 0 1222233455555555443 89999999999998887 466665544332 2233333 455556
Q ss_pred CcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC-CHHHHH
Q 012436 336 GNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ-NAEEYA 414 (464)
Q Consensus 336 ~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~-~~~~la 414 (464)
++|+++.++...+...+++.|-+.+--| |.-.=||-..|+||++-+...-.+|.+.. ++-.+++ +.+.+.
T Consensus 262 ~~v~li~pl~~~~f~~L~~~a~~iltDS-----GgiqEEAp~lg~Pvl~lR~~TERPE~v~a----gt~~lvg~~~~~i~ 332 (383)
T COG0381 262 ERVKLIDPLGYLDFHNLMKNAFLILTDS-----GGIQEEAPSLGKPVLVLRDTTERPEGVEA----GTNILVGTDEENIL 332 (383)
T ss_pred CcEEEeCCcchHHHHHHHHhceEEEecC-----CchhhhHHhcCCcEEeeccCCCCccceec----CceEEeCccHHHHH
Confidence 6899999999999999999997766443 44567999999999998877666776654 5556666 999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Q 012436 415 DAIVKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIRPI 458 (464)
Q Consensus 415 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 458 (464)
+++.++++ +++.+++|++.. ..|.-.+..+++.+++...
T Consensus 333 ~~~~~ll~-~~~~~~~m~~~~----npYgdg~as~rIv~~l~~~ 371 (383)
T COG0381 333 DAATELLE-DEEFYERMSNAK----NPYGDGNASERIVEILLNY 371 (383)
T ss_pred HHHHHHhh-ChHHHHHHhccc----CCCcCcchHHHHHHHHHHH
Confidence 99999999 998888776533 4455555666666665543
|
|
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=99.14 E-value=4e-08 Score=95.85 Aligned_cols=88 Identities=22% Similarity=0.180 Sum_probs=61.6
Q ss_pred CCCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCc---cceecccCCccceeecC--
Q 012436 334 VDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPK---MDIVLEEDGQQTGFLAQ-- 408 (464)
Q Consensus 334 l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~---~~~v~~~~~~~~g~~~~-- 408 (464)
+++||.+.+++|.. ++|..||++|.- +...++.||+++|+|+|+....+.- .+.+.. .+.|...+
T Consensus 286 ~~~~v~~~~~~p~~---~ll~~~d~~I~h----gG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~---~G~g~~l~~~ 355 (401)
T cd03784 286 LPDNVRVVDFVPHD---WLLPRCAAVVHH----GGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAE---LGAGPALDPR 355 (401)
T ss_pred CCCceEEeCCCCHH---HHhhhhheeeec----CCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHH---CCCCCCCCcc
Confidence 36799999998654 558889999943 3357999999999999998765420 112233 35565543
Q ss_pred --CHHHHHHHHHHHHcCCHHHHHHHHH
Q 012436 409 --NAEEYADAIVKIISMPETERLEMAA 433 (464)
Q Consensus 409 --~~~~la~~i~~l~~~~~~~~~~~~~ 433 (464)
+++++.+++.++++ ++ .+++..+
T Consensus 356 ~~~~~~l~~al~~~l~-~~-~~~~~~~ 380 (401)
T cd03784 356 ELTAERLAAALRRLLD-PP-SRRRAAA 380 (401)
T ss_pred cCCHHHHHHHHHHHhC-HH-HHHHHHH
Confidence 78999999999997 54 3333333
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=99.13 E-value=8.9e-09 Score=94.43 Aligned_cols=98 Identities=19% Similarity=0.226 Sum_probs=73.0
Q ss_pred CcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEE-EEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChh
Q 012436 269 YPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRL-QFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYR 347 (464)
Q Consensus 269 ~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l-~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~ 347 (464)
+.+++++|..++.+....+++++..+.. ++++ +++|.+.. ..+++++.++.. +++++.+++ +
T Consensus 171 ~~iLi~~GG~d~~~~~~~~l~~l~~~~~-------~~~i~vv~G~~~~-----~~~~l~~~~~~~---~~i~~~~~~--~ 233 (279)
T TIGR03590 171 RRVLVSFGGADPDNLTLKLLSALAESQI-------NISITLVTGSSNP-----NLDELKKFAKEY---PNIILFIDV--E 233 (279)
T ss_pred CeEEEEeCCcCCcCHHHHHHHHHhcccc-------CceEEEEECCCCc-----CHHHHHHHHHhC---CCEEEEeCH--H
Confidence 4578888988887767788888876532 3333 36665532 135677766653 489999999 8
Q ss_pred HHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCC
Q 012436 348 DLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSA 388 (464)
Q Consensus 348 ~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~ 388 (464)
++.++|++||++|.+ .|.+++|++++|+|+|+....
T Consensus 234 ~m~~lm~~aDl~Is~-----~G~T~~E~~a~g~P~i~i~~~ 269 (279)
T TIGR03590 234 NMAELMNEADLAIGA-----AGSTSWERCCLGLPSLAICLA 269 (279)
T ss_pred HHHHHHHHCCEEEEC-----CchHHHHHHHcCCCEEEEEec
Confidence 999999999999974 458999999999999987654
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >COG4641 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=99.09 E-value=3.6e-08 Score=89.82 Aligned_cols=217 Identities=14% Similarity=0.068 Sum_probs=150.4
Q ss_pred cCCEEEEcCHHH-HHHHHHHhCCCCCeEEecCCCCCCCCccCCCCCCCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhc
Q 012436 221 CADLAMVNSSWT-QSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLD 299 (464)
Q Consensus 221 ~ad~vi~~S~~~-~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~ 299 (464)
..|.|++.++.. ++.+.+..+ ..+...++.++|.+.+.+.+...... -.+.++|...+. ..+.+-+.+..=.....
T Consensus 138 ~fd~v~~~g~~l~~~~yyq~~~-~~~~~~~~~a~d~~~~~~i~~da~~~-~dL~~ign~~pD-r~e~~ke~~~~ps~kl~ 214 (373)
T COG4641 138 IFDNVLSFGGGLVANKYYQEGG-ARNCYYLPWAVDDSLFHPIPPDASYD-VDLNLIGNPYPD-RVEEIKEFFVEPSFKLM 214 (373)
T ss_pred hhhhhhhccchHHHHHHHHhhc-ccceeccCccCCchhcccCCccccce-eeeEEecCCCcc-HHHHHHHHhhccchhhh
Confidence 345566667766 555554433 56778899999999988766433322 478899976555 12222222221111111
Q ss_pred CCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCh-hHHHHHHhcCcEEEEcCC---CC-C--CChHH
Q 012436 300 ADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLY-RDLVKLLGGAVVGIHSMI---DE-H--FGISV 372 (464)
Q Consensus 300 ~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~-~~~~~~l~~ad~~v~ps~---~e-~--~~~~~ 372 (464)
-+-++.+.|.... ..+... -..+++...|+.+. +.+...++..|+.+.-++ .+ + +.+-+
T Consensus 215 ---v~rr~~~~g~~y~-------~~~~~~----~~~~~~~yIg~~~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~Rv 280 (373)
T COG4641 215 ---VDRRFYVLGPRYP-------DDIWGR----TWEPNVQYIGYYNPKDGVPNAFKRDDVTLNINRASIANALFSPTNRV 280 (373)
T ss_pred ---ccceeeecCCccc-------hhhhcc----cccchhhhhhccCccchhhhcccccceeeeecHHHHHhhcCCchhhH
Confidence 1345666665411 111111 11357888898866 899999999999876543 22 2 26779
Q ss_pred HHHHHhCCcEEEeCCCCCccceecccCCccceeecCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-HccCHHHHHHHH
Q 012436 373 VEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQNAEEYADAIVKIISMPETERLEMAAAARRRA-ARFSEQRFYEDF 451 (464)
Q Consensus 373 ~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~ 451 (464)
.|+++||.|.|++...+. +..+.+ |+.-+++.|..++.+.+..++. .+++++++++.+.+.+ ..|+.++-...+
T Consensus 281 Feiagc~~~liT~~~~~~-e~~f~p---gk~~iv~~d~kdl~~~~~yll~-h~~erkeiae~~ye~V~~~ht~~~r~~~~ 355 (373)
T COG4641 281 FEIAGCGGFLITDYWKDL-EKFFKP---GKDIIVYQDSKDLKEKLKYLLN-HPDERKEIAECAYERVLARHTYEERIFKL 355 (373)
T ss_pred HHHhhcCCccccccHHHH-HHhcCC---chheEEecCHHHHHHHHHHHhc-CcchHHHHHHhhHHHHHHhccHHHHHHHH
Confidence 999999999999888777 677777 7777788899999999999999 9999999999999999 889999999888
Q ss_pred HHHHHHHH
Q 012436 452 KAAIRPIL 459 (464)
Q Consensus 452 ~~~~~~~~ 459 (464)
++.+..+.
T Consensus 356 ~~~i~sI~ 363 (373)
T COG4641 356 LNEIASIN 363 (373)
T ss_pred HHHHHHHH
Confidence 88877643
|
|
| >PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=2.2e-08 Score=99.34 Aligned_cols=137 Identities=15% Similarity=0.028 Sum_probs=85.9
Q ss_pred CcEEEEEeccCCC-C----ChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccC
Q 012436 269 YPAIISVAQFRPE-K----AHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKN 343 (464)
Q Consensus 269 ~~~i~~~G~~~~~-K----~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~ 343 (464)
+.+++..|+.... + -...+++|++++ +.++++...+... . .++++||.+.++
T Consensus 297 g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l---------~~~viw~~~~~~~------~--------~~~p~Nv~i~~w 353 (507)
T PHA03392 297 GVVYVSFGSSIDTNDMDNEFLQMLLRTFKKL---------PYNVLWKYDGEVE------A--------INLPANVLTQKW 353 (507)
T ss_pred cEEEEECCCCCcCCCCCHHHHHHHHHHHHhC---------CCeEEEEECCCcC------c--------ccCCCceEEecC
Confidence 4677777876432 2 234445555444 4566555443211 1 134789999999
Q ss_pred CChhHHHHHH--hcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCcc---ceecccCCccceeecC----CHHHHH
Q 012436 344 LLYRDLVKLL--GGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKM---DIVLEEDGQQTGFLAQ----NAEEYA 414 (464)
Q Consensus 344 ~~~~~~~~~l--~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~---~~v~~~~~~~~g~~~~----~~~~la 414 (464)
+|+.++ + ..++++|.- |...++.||+.+|+|+|+-...+--. ..+.. .+.|...+ +.+++.
T Consensus 354 ~Pq~~l---L~hp~v~~fItH----GG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~---~G~G~~l~~~~~t~~~l~ 423 (507)
T PHA03392 354 FPQRAV---LKHKNVKAFVTQ----GGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVE---LGIGRALDTVTVSAAQLV 423 (507)
T ss_pred CCHHHH---hcCCCCCEEEec----CCcccHHHHHHcCCCEEECCCCccHHHHHHHHHH---cCcEEEeccCCcCHHHHH
Confidence 988654 6 558888833 44568999999999999977553211 11223 35565543 889999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHHH
Q 012436 415 DAIVKIISMPETERLEMAAAARRRA 439 (464)
Q Consensus 415 ~~i~~l~~~~~~~~~~~~~~~~~~~ 439 (464)
++|.++++ |+..++...+-++...
T Consensus 424 ~ai~~vl~-~~~y~~~a~~ls~~~~ 447 (507)
T PHA03392 424 LAIVDVIE-NPKYRKNLKELRHLIR 447 (507)
T ss_pred HHHHHHhC-CHHHHHHHHHHHHHHH
Confidence 99999999 8765555444444433
|
|
| >PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length | Back alignment and domain information |
|---|
Probab=99.06 E-value=5.6e-08 Score=90.16 Aligned_cols=290 Identities=13% Similarity=0.133 Sum_probs=161.8
Q ss_pred ceEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeecccccccc
Q 012436 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (464)
Q Consensus 35 mkI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (464)
|||++-.... ....+...+++.|.+.| ++|.+.+.+. .......+.+|+. ...+.... .
T Consensus 1 MkIwiDi~~p----~hvhfFk~~I~eL~~~G--heV~it~R~~-----~~~~~LL~~yg~~------y~~iG~~g---~- 59 (335)
T PF04007_consen 1 MKIWIDITHP----AHVHFFKNIIRELEKRG--HEVLITARDK-----DETEELLDLYGID------YIVIGKHG---D- 59 (335)
T ss_pred CeEEEECCCc----hHHHHHHHHHHHHHhCC--CEEEEEEecc-----chHHHHHHHcCCC------eEEEcCCC---C-
Confidence 7888865554 36688899999999999 6767767654 2223344455552 22222211 1
Q ss_pred cCcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccchhhhccCceEEEEeeCCcchhhhhhcccccccccCCCccc
Q 012436 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASI 194 (464)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~ 194 (464)
..............++.+.+++++||++++..+... ..++...|+|.|....++...
T Consensus 60 --~~~~Kl~~~~~R~~~l~~~~~~~~pDv~is~~s~~a-~~va~~lgiP~I~f~D~e~a~-------------------- 116 (335)
T PF04007_consen 60 --SLYGKLLESIERQYKLLKLIKKFKPDVAISFGSPEA-ARVAFGLGIPSIVFNDTEHAI-------------------- 116 (335)
T ss_pred --CHHHHHHHHHHHHHHHHHHHHhhCCCEEEecCcHHH-HHHHHHhCCCeEEEecCchhh--------------------
Confidence 111222223344556667788899999996544222 126778999999988854310
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCC----CCccCC-----CCC
Q 012436 195 AQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTS----GLQVLP-----LER 265 (464)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~----~~~~~~-----~~~ 265 (464)
...+..+..||.+++++-.-...+.+. |..+++ .-++|++.- .|.+.+ ...
T Consensus 117 ------------------~~~~Lt~Pla~~i~~P~~~~~~~~~~~-G~~~~i-~~y~G~~E~ayl~~F~Pd~~vl~~lg~ 176 (335)
T PF04007_consen 117 ------------------AQNRLTLPLADVIITPEAIPKEFLKRF-GAKNQI-RTYNGYKELAYLHPFKPDPEVLKELGL 176 (335)
T ss_pred ------------------ccceeehhcCCeeECCcccCHHHHHhc-CCcCCE-EEECCeeeEEeecCCCCChhHHHHcCC
Confidence 011444578999998877666666555 433233 226776542 222211 111
Q ss_pred CCCCcEEEEEeccCCC-----CCh-HHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEE
Q 012436 266 STEYPAIISVAQFRPE-----KAH-PLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVE 339 (464)
Q Consensus 266 ~~~~~~i~~~G~~~~~-----K~~-~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~ 339 (464)
++..+|+ + |..+. +|- ..+-+.++.+.+.. +. ++++....+ .+.+.+++ ++.
T Consensus 177 -~~~~yIv-v-R~~~~~A~y~~~~~~i~~~ii~~L~~~~-----~~-vV~ipr~~~---------~~~~~~~~----~~~ 234 (335)
T PF04007_consen 177 -DDEPYIV-V-RPEAWKASYDNGKKSILPEIIEELEKYG-----RN-VVIIPRYED---------QRELFEKY----GVI 234 (335)
T ss_pred -CCCCEEE-E-EeccccCeeecCccchHHHHHHHHHhhC-----ce-EEEecCCcc---------hhhHHhcc----Ccc
Confidence 2233333 2 33332 222 33445566665553 33 556654321 11222222 233
Q ss_pred EccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCC--ccceecccCCccceeec--CCHHHHHH
Q 012436 340 FYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGP--KMDIVLEEDGQQTGFLA--QNAEEYAD 415 (464)
Q Consensus 340 ~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~--~~~~v~~~~~~~~g~~~--~~~~~la~ 415 (464)
+.... -+..+++.-||++|. +.|....||..+|+|.|.+-.+.. ..+... +.|.+. .|++++.+
T Consensus 235 i~~~~--vd~~~Ll~~a~l~Ig-----~ggTMa~EAA~LGtPaIs~~~g~~~~vd~~L~-----~~Gll~~~~~~~ei~~ 302 (335)
T PF04007_consen 235 IPPEP--VDGLDLLYYADLVIG-----GGGTMAREAALLGTPAISCFPGKLLAVDKYLI-----EKGLLYHSTDPDEIVE 302 (335)
T ss_pred ccCCC--CCHHHHHHhcCEEEe-----CCcHHHHHHHHhCCCEEEecCCcchhHHHHHH-----HCCCeEecCCHHHHHH
Confidence 33332 356689999999993 446778999999999999754321 123332 345554 49999888
Q ss_pred HHHHHHc
Q 012436 416 AIVKIIS 422 (464)
Q Consensus 416 ~i~~l~~ 422 (464)
.+.+...
T Consensus 303 ~v~~~~~ 309 (335)
T PF04007_consen 303 YVRKNLG 309 (335)
T ss_pred HHHHhhh
Confidence 6665544
|
They are found in archaea and some bacteria and have no known function. |
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.05 E-value=2.6e-08 Score=91.32 Aligned_cols=325 Identities=14% Similarity=0.089 Sum_probs=180.3
Q ss_pred cceEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeeccccccc
Q 012436 34 TTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEE 113 (464)
Q Consensus 34 ~mkI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (464)
+|||+++..-. .+......++++|.++-.+++++-+.+.. +... |.+..- ....+....+.
T Consensus 1 ~~ki~i~AGE~----SGDllGa~LikaLk~~~~~~efvGvgG~~------m~ae-----G~~sl~--~~~elsvmGf~-- 61 (381)
T COG0763 1 MLKIALSAGEA----SGDLLGAGLIKALKARYPDVEFVGVGGEK------MEAE-----GLESLF--DMEELSVMGFV-- 61 (381)
T ss_pred CceEEEEeccc----chhhHHHHHHHHHHhhCCCeEEEEeccHH------HHhc-----cCcccc--CHHHHHHhhHH--
Confidence 36888875544 34556678899999987677877666532 1100 110000 00000000000
Q ss_pred ccCcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccchhhh---c--cCceEEEEeeCCcchhhhhhccccccccc
Q 012436 114 STYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLAR---I--FGCRVICYTHYPTISLDMISRVREGSSMY 188 (464)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~~~~---~--~~~p~v~~~h~p~~~~~~~~~~~~~~~~~ 188 (464)
.-+..+...+.......+.+...+||+++.-....+.+.+++ . +++|+|.|+- ..+|.
T Consensus 62 ---EVL~~lp~llk~~~~~~~~i~~~kpD~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~---------PsVWA----- 124 (381)
T COG0763 62 ---EVLGRLPRLLKIRRELVRYILANKPDVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVS---------PSVWA----- 124 (381)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCCchHHHHHHHHhCCCCCeEEEEC---------cceee-----
Confidence 000011111222334444566789999987677677766544 2 3477777665 22330
Q ss_pred CCCcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCC-CccC------
Q 012436 189 NNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSG-LQVL------ 261 (464)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~-~~~~------ 261 (464)
|. .+ | ...+.+.+|.+++.-++..+.+.+... +.++|.++.-.+. +.+.
T Consensus 125 ----------Wr--~~----R-----a~~i~~~~D~lLailPFE~~~y~k~g~---~~~yVGHpl~d~i~~~~~r~~ar~ 180 (381)
T COG0763 125 ----------WR--PK----R-----AVKIAKYVDHLLAILPFEPAFYDKFGL---PCTYVGHPLADEIPLLPDREAARE 180 (381)
T ss_pred ----------ec--hh----h-----HHHHHHHhhHeeeecCCCHHHHHhcCC---CeEEeCChhhhhccccccHHHHHH
Confidence 00 00 0 133448899999999999999988742 3667777753322 2211
Q ss_pred CCCCC-CCCcEEEEEeccC--CCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcE
Q 012436 262 PLERS-TEYPAIISVAQFR--PEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNV 338 (464)
Q Consensus 262 ~~~~~-~~~~~i~~~G~~~--~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v 338 (464)
....+ +.+...+..|+-. -.+-...+++++..++.+. |+.++++--... .+.....+..+......++
T Consensus 181 ~l~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~----~~~~~vlp~~~~-----~~~~~~~~~~~~~~~~~~~ 251 (381)
T COG0763 181 KLGIDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARY----PDLKFVLPLVNA-----KYRRIIEEALKWEVAGLSL 251 (381)
T ss_pred HhCCCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhC----CCceEEEecCcH-----HHHHHHHHHhhccccCceE
Confidence 11112 3345556667542 2366788888888888777 799998877543 2222222222221111122
Q ss_pred EEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeC-CCCCccc-eecccC-----C--c-cce-eec
Q 012436 339 EFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHN-SAGPKMD-IVLEED-----G--Q-QTG-FLA 407 (464)
Q Consensus 339 ~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~-~~~~~~~-~v~~~~-----~--~-~~g-~~~ 407 (464)
. +...+-.+.+..||+.+..| |++.+|++.+|+|.|++- .... .- +..... + + -.| .++
T Consensus 252 ~----~~~~~~~~a~~~aD~al~aS-----GT~tLE~aL~g~P~Vv~Yk~~~i-t~~iak~lvk~~yisLpNIi~~~~iv 321 (381)
T COG0763 252 I----LIDGEKRKAFAAADAALAAS-----GTATLEAALAGTPMVVAYKVKPI-TYFIAKRLVKLPYVSLPNILAGREIV 321 (381)
T ss_pred E----ecCchHHHHHHHhhHHHHhc-----cHHHHHHHHhCCCEEEEEeccHH-HHHHHHHhccCCcccchHHhcCCccc
Confidence 2 23356778899999987665 889999999999999863 2221 11 110000 0 0 001 111
Q ss_pred ------C-CHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012436 408 ------Q-NAEEYADAIVKIISMPETERLEMAAAARRR 438 (464)
Q Consensus 408 ------~-~~~~la~~i~~l~~~~~~~~~~~~~~~~~~ 438 (464)
+ .++.+++++..++. |...++++.+...+.
T Consensus 322 PEliq~~~~pe~la~~l~~ll~-~~~~~~~~~~~~~~l 358 (381)
T COG0763 322 PELIQEDCTPENLARALEELLL-NGDRREALKEKFREL 358 (381)
T ss_pred hHHHhhhcCHHHHHHHHHHHhc-ChHhHHHHHHHHHHH
Confidence 1 69999999999999 886666666655443
|
|
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.04 E-value=2.7e-08 Score=93.55 Aligned_cols=311 Identities=14% Similarity=0.101 Sum_probs=175.6
Q ss_pred cchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeecccccccccCcceehhhhchhhh
Q 012436 50 GERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSV 129 (464)
Q Consensus 50 ~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (464)
+..+...|+++|.+...++++.-+.+.. +.. -|.+..-+. -.+..-.+. .-+..+.......
T Consensus 10 GD~~ga~Li~~Lk~~~p~~~~~GvGG~~------M~~-----~G~~~l~d~--~~lsvmG~~-----Evl~~l~~~~~~~ 71 (373)
T PF02684_consen 10 GDLHGARLIRALKARDPDIEFYGVGGPR------MQA-----AGVESLFDM--EELSVMGFV-----EVLKKLPKLKRLF 71 (373)
T ss_pred HHHHHHHHHHHHHhhCCCcEEEEEechH------HHh-----CCCceecch--HHhhhccHH-----HHHHHHHHHHHHH
Confidence 5667789999999999877777666532 111 122111000 000000000 0011111222334
Q ss_pred HHHHHHhhhcCCcEEEecccccccchhhh---ccCce--EEEEeeCCcchhhhhhcccccccccCCCcccccchhhhHHH
Q 012436 130 YLSWEALCKFTPLYYFDTSGYAFTYPLAR---IFGCR--VICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCK 204 (464)
Q Consensus 130 ~~~~~~l~~~~~Dvv~~~~~~~~~~~~~~---~~~~p--~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (464)
..+.+.+.+.+||+++......+.+.+++ ..++| ++.|+- |. +|. |.. .
T Consensus 72 ~~~~~~~~~~~pd~vIlID~pgFNlrlak~lk~~~~~~~viyYI~-Pq--------vWA---------------Wr~--~ 125 (373)
T PF02684_consen 72 RKLVERIKEEKPDVVILIDYPGFNLRLAKKLKKRGIPIKVIYYIS-PQ--------VWA---------------WRP--G 125 (373)
T ss_pred HHHHHHHHHcCCCEEEEeCCCCccHHHHHHHHHhCCCceEEEEEC-Cc--------eee---------------eCc--c
Confidence 44555677889999886666666666555 55666 666554 32 220 100 0
Q ss_pred HHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCC-------CCCCCCCcEEEEEec
Q 012436 205 IVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLP-------LERSTEYPAIISVAQ 277 (464)
Q Consensus 205 ~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~-------~~~~~~~~~i~~~G~ 277 (464)
| -+.+-+.+|.++|.=++..+.+++.+ -+++++.||+-.......+ .-..+++...+..|+
T Consensus 126 ----R-----~~~i~~~~D~ll~ifPFE~~~y~~~g---~~~~~VGHPl~d~~~~~~~~~~~~~~~l~~~~~iIaLLPGS 193 (373)
T PF02684_consen 126 ----R-----AKKIKKYVDHLLVIFPFEPEFYKKHG---VPVTYVGHPLLDEVKPEPDRAEAREKLLDPDKPIIALLPGS 193 (373)
T ss_pred ----H-----HHHHHHHHhheeECCcccHHHHhccC---CCeEEECCcchhhhccCCCHHHHHHhcCCCCCcEEEEeCCC
Confidence 0 13334778999999999999998873 4677888875222111100 111233345566665
Q ss_pred cC--CCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHHHhc
Q 012436 278 FR--PEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGG 355 (464)
Q Consensus 278 ~~--~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ 355 (464)
-. -.+.+..++++++.+.++. |++++++..... ...+.+++.....+....+... ..+-.+.|+.
T Consensus 194 R~~EI~rllP~~l~aa~~l~~~~----p~l~fvvp~a~~-----~~~~~i~~~~~~~~~~~~~~~~----~~~~~~~m~~ 260 (373)
T PF02684_consen 194 RKSEIKRLLPIFLEAAKLLKKQR----PDLQFVVPVAPE-----VHEELIEEILAEYPPDVSIVII----EGESYDAMAA 260 (373)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhC----CCeEEEEecCCH-----HHHHHHHHHHHhhCCCCeEEEc----CCchHHHHHh
Confidence 32 2356688899999999887 799999887543 1223344444444332222222 2467788999
Q ss_pred CcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccce-----ecc-cCC------ccce---eec-C-CHHHHHHHHH
Q 012436 356 AVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDI-----VLE-EDG------QQTG---FLA-Q-NAEEYADAIV 418 (464)
Q Consensus 356 ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~-----v~~-~~~------~~~g---~~~-~-~~~~la~~i~ 418 (464)
||+.+..| |++.+|++.+|+|.|+.-..+..... +.- ..+ +... ++- + +++.+++++.
T Consensus 261 ad~al~~S-----GTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~~ 335 (373)
T PF02684_consen 261 ADAALAAS-----GTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPENIAAELL 335 (373)
T ss_pred CcchhhcC-----CHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHHHHHHHH
Confidence 99988775 88999999999999975322111111 100 000 0110 111 2 8999999999
Q ss_pred HHHcCCHHHHHHHHHHH
Q 012436 419 KIISMPETERLEMAAAA 435 (464)
Q Consensus 419 ~l~~~~~~~~~~~~~~~ 435 (464)
+++. |++.++...+..
T Consensus 336 ~ll~-~~~~~~~~~~~~ 351 (373)
T PF02684_consen 336 ELLE-NPEKRKKQKELF 351 (373)
T ss_pred HHhc-CHHHHHHHHHHH
Confidence 9999 887654444433
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=3.2e-07 Score=81.92 Aligned_cols=229 Identities=12% Similarity=0.142 Sum_probs=144.3
Q ss_pred HHHHHHHHHHHHhhcCCEEEEcCHHHHHHH-HHHhCCCCCeEEecCCCCCCCCccCCCCCCCCCcEEEEEecc-CCCCCh
Q 012436 207 YYTFFSWMYGLVGSCADLAMVNSSWTQSHI-EKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQF-RPEKAH 284 (464)
Q Consensus 207 ~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~-~~~~~~~~~i~~i~~~~d~~~~~~~~~~~~~~~~~i~~~G~~-~~~K~~ 284 (464)
..+.+..+.+.+.++..+|++ +.....++ ++.++.+.+....|.-.++. .........++...-+-+|+. ++..++
T Consensus 84 k~rlfy~lRR~aq~rvg~v~a-trGD~~~~a~~~~~v~~~llyfpt~m~~~-l~~~~~~~~~~~~~tIlvGNSgd~SN~H 161 (322)
T PRK02797 84 KFRLFYPLRRLAQKRVGHVFA-TRGDLSYFAQRHPKVPGSLLYFPTRMDPS-LNTMANDRQRAGKMTILVGNSGDRSNRH 161 (322)
T ss_pred hHHHHHHHHHHHHhhcCeEEE-ecchHHHHHHhcCCCCccEEecCCcchhh-hccccccccCCCceEEEEeCCCCCcccH
Confidence 344555566788899999999 77777775 45545566654444333322 221111112222344555654 566667
Q ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEE-ccCCChhHHHHHHhcCcEEEEcC
Q 012436 285 PLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEF-YKNLLYRDLVKLLGGAVVGIHSM 363 (464)
Q Consensus 285 ~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~-~g~~~~~~~~~~l~~ad~~v~ps 363 (464)
..+++++.+... .++++++-=+-|.. +++|.+++++.++++--.+++.. ..++|.+|..++++.||+.++..
T Consensus 162 ie~L~~l~~~~~------~~v~ii~PlsYp~g-n~~Yi~~V~~~~~~lF~~~~~~~L~e~l~f~eYl~lL~~~Dl~~f~~ 234 (322)
T PRK02797 162 IEALRALHQQFG------DNVKIIVPMGYPAN-NQAYIEEVRQAGLALFGAENFQILTEKLPFDDYLALLRQCDLGYFIF 234 (322)
T ss_pred HHHHHHHHHHhC------CCeEEEEECCcCCC-CHHHHHHHHHHHHHhcCcccEEehhhhCCHHHHHHHHHhCCEEEEee
Confidence 666666655433 27777665443322 46899999999998875567766 47789999999999999998876
Q ss_pred -CCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC----CHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012436 364 -IDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ----NAEEYADAIVKIISMPETERLEMAAAARRR 438 (464)
Q Consensus 364 -~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~ 438 (464)
+..|.| +++-.+..|+||+.+.......++.+. +.-++++ |...+.++=+++. ..-++.
T Consensus 235 ~RQQgiG-nl~lLi~~G~~v~l~r~n~fwqdl~e~----gv~Vlf~~d~L~~~~v~e~~rql~-----------~~dk~~ 298 (322)
T PRK02797 235 ARQQGIG-TLCLLIQLGKPVVLSRDNPFWQDLTEQ----GLPVLFTGDDLDEDIVREAQRQLA-----------SVDKNI 298 (322)
T ss_pred chhhHHh-HHHHHHHCCCcEEEecCCchHHHHHhC----CCeEEecCCcccHHHHHHHHHHHH-----------hhCcce
Confidence 577888 455588999999999766665666544 2333232 3333333322222 222222
Q ss_pred HHccCHHHHHHHHHHHHHHHHhh
Q 012436 439 AARFSEQRFYEDFKAAIRPILCH 461 (464)
Q Consensus 439 ~~~~s~~~~~~~~~~~~~~~~~~ 461 (464)
+. |+.+++.+.|.++++.....
T Consensus 299 I~-Ff~pn~~~~W~~~l~~~~g~ 320 (322)
T PRK02797 299 IA-FFSPNYLQGWRNALAIAAGE 320 (322)
T ss_pred ee-ecCHhHHHHHHHHHHHhhCC
Confidence 23 99999999999999876543
|
|
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=98.97 E-value=1e-08 Score=96.67 Aligned_cols=272 Identities=13% Similarity=0.085 Sum_probs=151.3
Q ss_pred hHHHHHHhhhcCCcEEEecccccccch---hhhccCceEEEEeeCCcchhhhhhcccccccccCCCcccccchhhhHHHH
Q 012436 129 VYLSWEALCKFTPLYYFDTSGYAFTYP---LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKI 205 (464)
Q Consensus 129 ~~~~~~~l~~~~~Dvv~~~~~~~~~~~---~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (464)
+..+.+.+.+.+||+|+.+......+. .+...++| |.++|....+.|.. .+....
T Consensus 56 ~~~~~~~~~~~~Pd~Vlv~GD~~~~la~alaA~~~~ip-v~HieaGlRs~d~~------------------~g~~de--- 113 (346)
T PF02350_consen 56 IIELADVLEREKPDAVLVLGDRNEALAAALAAFYLNIP-VAHIEAGLRSGDRT------------------EGMPDE--- 113 (346)
T ss_dssp HHHHHHHHHHHT-SEEEEETTSHHHHHHHHHHHHTT-E-EEEES-----S-TT------------------SSTTHH---
T ss_pred HHHHHHHHHhcCCCEEEEEcCCchHHHHHHHHHHhCCC-EEEecCCCCccccC------------------CCCchh---
Confidence 344556688889998875444332222 45589999 66666331111110 001111
Q ss_pred HHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCC-CCC-----CCc-cC---CC-CCCCCCcEEEE
Q 012436 206 VYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPC-DTS-----GLQ-VL---PL-ERSTEYPAIIS 274 (464)
Q Consensus 206 ~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~-d~~-----~~~-~~---~~-~~~~~~~~i~~ 274 (464)
. ....+-+.|+..++.++..++.+.+.+..++++.++.++. |.- ... .. .. ....++..++.
T Consensus 114 ~-------~R~~i~~la~lhf~~t~~~~~~L~~~G~~~~rI~~vG~~~~D~l~~~~~~~~~~~~~~~i~~~~~~~~iLvt 186 (346)
T PF02350_consen 114 I-------NRHAIDKLAHLHFAPTEEARERLLQEGEPPERIFVVGNPGIDALLQNKEEIEEKYKNSGILQDAPKPYILVT 186 (346)
T ss_dssp H-------HHHHHHHH-SEEEESSHHHHHHHHHTT--GGGEEE---HHHHHHHHHHHTTCC-HHHHHHHHCTTSEEEEEE
T ss_pred h-------hhhhhhhhhhhhccCCHHHHHHHHhcCCCCCeEEEEChHHHHHHHHhHHHHhhhhhhHHHHhccCCCEEEEE
Confidence 1 1133447889999999999999999854478998887753 211 000 00 00 01233334444
Q ss_pred EeccCC---CCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHH
Q 012436 275 VAQFRP---EKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVK 351 (464)
Q Consensus 275 ~G~~~~---~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~ 351 (464)
.-+... ......+.++++.+.+.. ++.+++.....+ .....+.+..+++ +++.+...++..++..
T Consensus 187 ~H~~t~~~~~~~~~~i~~~l~~L~~~~-----~~~vi~~~hn~p----~~~~~i~~~l~~~---~~v~~~~~l~~~~~l~ 254 (346)
T PF02350_consen 187 LHPVTNEDNPERLEQILEALKALAERQ-----NVPVIFPLHNNP----RGSDIIIEKLKKY---DNVRLIEPLGYEEYLS 254 (346)
T ss_dssp -S-CCCCTHH--HHHHHHHHHHHHHHT-----TEEEEEE--S-H----HHHHHHHHHHTT----TTEEEE----HHHHHH
T ss_pred eCcchhcCChHHHHHHHHHHHHHHhcC-----CCcEEEEecCCc----hHHHHHHHHhccc---CCEEEECCCCHHHHHH
Confidence 433332 234677888888887762 788888776322 3345566666555 3899999999999999
Q ss_pred HHhcCcEEEEcCCCCCCChHHH-HHHHhCCcEEEeCCCCCccceecccCCccceeecC-CHHHHHHHHHHHHcCCHHHHH
Q 012436 352 LLGGAVVGIHSMIDEHFGISVV-EYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ-NAEEYADAIVKIISMPETERL 429 (464)
Q Consensus 352 ~l~~ad~~v~ps~~e~~~~~~~-Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~-~~~~la~~i~~l~~~~~~~~~ 429 (464)
+++.|+++|--| | .+. ||.++|+|+|.-...|...+.... +.+.+ ++ |.+++.+++.++++ +++.+.
T Consensus 255 ll~~a~~vvgdS-----s-GI~eEa~~lg~P~v~iR~~geRqe~r~~---~~nvl-v~~~~~~I~~ai~~~l~-~~~~~~ 323 (346)
T PF02350_consen 255 LLKNADLVVGDS-----S-GIQEEAPSLGKPVVNIRDSGERQEGRER---GSNVL-VGTDPEAIIQAIEKALS-DKDFYR 323 (346)
T ss_dssp HHHHESEEEESS-----H-HHHHHGGGGT--EEECSSS-S-HHHHHT---TSEEE-ETSSHHHHHHHHHHHHH--HHHHH
T ss_pred HHhcceEEEEcC-----c-cHHHHHHHhCCeEEEecCCCCCHHHHhh---cceEE-eCCCHHHHHHHHHHHHh-ChHHHH
Confidence 999999998543 4 666 999999999999766776777666 55555 66 99999999999998 644443
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHH
Q 012436 430 EMAAAARRRAARFSEQRFYEDFKAAIR 456 (464)
Q Consensus 430 ~~~~~~~~~~~~~s~~~~~~~~~~~~~ 456 (464)
++.. ....|.-...++++.++++
T Consensus 324 ~~~~----~~npYgdG~as~rI~~~Lk 346 (346)
T PF02350_consen 324 KLKN----RPNPYGDGNASERIVEILK 346 (346)
T ss_dssp HHHC----S--TT-SS-HHHHHHHHHH
T ss_pred hhcc----CCCCCCCCcHHHHHHHhhC
Confidence 3321 1135666666777766653
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >TIGR00661 MJ1255 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.6e-07 Score=88.39 Aligned_cols=79 Identities=18% Similarity=0.140 Sum_probs=54.2
Q ss_pred CCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccc-----eecccCCccceeecC-
Q 012436 335 DGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMD-----IVLEEDGQQTGFLAQ- 408 (464)
Q Consensus 335 ~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~-----~v~~~~~~~~g~~~~- 408 (464)
.+++.+.++.+ +++.++|+.||++|.-+ | ..++.||+++|+|+|..+..+..+. .+.+ .+.|...+
T Consensus 228 ~~~v~~~~~~~-~~~~~~l~~ad~vI~~~---G-~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~---~g~~~~l~~ 299 (321)
T TIGR00661 228 NENVEIRRITT-DNFKELIKNAELVITHG---G-FSLISEALSLGKPLIVIPDLGQFEQGNNAVKLED---LGCGIALEY 299 (321)
T ss_pred CCCEEEEECCh-HHHHHHHHhCCEEEECC---C-hHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHH---CCCEEEcCh
Confidence 46899998875 68999999999999763 2 2479999999999999887654222 1233 35565554
Q ss_pred -CHHHHHHHHHHHHc
Q 012436 409 -NAEEYADAIVKIIS 422 (464)
Q Consensus 409 -~~~~la~~i~~l~~ 422 (464)
+. ++.+++.+.++
T Consensus 300 ~~~-~~~~~~~~~~~ 313 (321)
T TIGR00661 300 KEL-RLLEAILDIRN 313 (321)
T ss_pred hhH-HHHHHHHhccc
Confidence 43 44444444443
|
This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases. |
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=98.93 E-value=5.8e-07 Score=81.38 Aligned_cols=222 Identities=12% Similarity=0.130 Sum_probs=138.9
Q ss_pred HHHHHHHhhcCCEEEEcCHHHHHHHHHHhCC-CCCeEEecCCCCCCCCccCCCCCCCCCcEEEEEecc-CCCCChHHHHH
Q 012436 212 SWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQF-RPEKAHPLQLE 289 (464)
Q Consensus 212 ~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~-~~~i~~i~~~~d~~~~~~~~~~~~~~~~~i~~~G~~-~~~K~~~~ll~ 289 (464)
..+.+.+.++...|++ .+.....+++.++. +......|..++...... ......++..-+-+|+. ++.-++..+++
T Consensus 128 y~lRr~aq~rvg~V~a-t~GDl~~~~q~~~~~~~~~lyfPt~m~~~~~~~-~~~~~~~~~ltILvGNSgd~sNnHieaL~ 205 (360)
T PF07429_consen 128 YFLRRLAQKRVGHVFA-TRGDLAYFQQRYPRVPASLLYFPTRMDPALTLS-EKNKKNKGKLTILVGNSGDPSNNHIEALE 205 (360)
T ss_pred HHHHHHHHhhcCeEEE-EcchHHHHHHHcCCCCceEEEcCCCCchhhhcc-ccccCCCCceEEEEcCCCCCCccHHHHHH
Confidence 3455666788888876 67888888888865 444434444454432221 12122223344455654 55566666666
Q ss_pred HHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEE-ccCCChhHHHHHHhcCcEEEEcC-CCCC
Q 012436 290 AFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEF-YKNLLYRDLVKLLGGAVVGIHSM-IDEH 367 (464)
Q Consensus 290 a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~-~g~~~~~~~~~~l~~ad~~v~ps-~~e~ 367 (464)
++++ ... .++++++-=+-+. .+++|.+++++.++++--.+++.. ..++|.+|..++++.||+.++.. +..|
T Consensus 206 ~L~~---~~~---~~~kIivPLsYg~-~n~~Yi~~V~~~~~~lF~~~~~~iL~e~mpf~eYl~lL~~cDl~if~~~RQQg 278 (360)
T PF07429_consen 206 ALKQ---QFG---DDVKIIVPLSYGA-NNQAYIQQVIQAGKELFGAENFQILTEFMPFDEYLALLSRCDLGIFNHNRQQG 278 (360)
T ss_pred HHHH---hcC---CCeEEEEECCCCC-chHHHHHHHHHHHHHhcCccceeEhhhhCCHHHHHHHHHhCCEEEEeechhhh
Confidence 5554 322 2666655432221 256899999999998754567876 47999999999999999999987 5778
Q ss_pred CChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeec-C--CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHccCH
Q 012436 368 FGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLA-Q--NAEEYADAIVKIISMPETERLEMAAAARRRAARFSE 444 (464)
Q Consensus 368 ~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~-~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~ 444 (464)
.| .++-.+.+|+||+.+.......++.+. +-.-+.. + |.+.+.++=+++...|+.. -.|..
T Consensus 279 iG-nI~lLl~~G~~v~L~~~np~~~~l~~~---~ipVlf~~d~L~~~~v~ea~rql~~~dk~~------------iaFf~ 342 (360)
T PF07429_consen 279 IG-NICLLLQLGKKVFLSRDNPFWQDLKEQ---GIPVLFYGDELDEALVREAQRQLANVDKQQ------------IAFFA 342 (360)
T ss_pred Hh-HHHHHHHcCCeEEEecCChHHHHHHhC---CCeEEeccccCCHHHHHHHHHHHhhCcccc------------eeeeC
Confidence 88 566689999999999877665555444 2222222 2 6666666666665423211 12555
Q ss_pred HHHHHHHHHHHHHH
Q 012436 445 QRFYEDFKAAIRPI 458 (464)
Q Consensus 445 ~~~~~~~~~~~~~~ 458 (464)
++..+.|.+.+.-.
T Consensus 343 pny~~~w~~~l~~~ 356 (360)
T PF07429_consen 343 PNYLQGWRQALRLA 356 (360)
T ss_pred CchHHHHHHHHHHH
Confidence 66677776666543
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.9e-07 Score=89.98 Aligned_cols=156 Identities=15% Similarity=0.063 Sum_probs=97.4
Q ss_pred CCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChh
Q 012436 268 EYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYR 347 (464)
Q Consensus 268 ~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~ 347 (464)
.+++.+..|+.... ..+++.+....... +.++++...+ .+ . ..-++++|+...+++|+.
T Consensus 237 ~~~vyvslGt~~~~---~~l~~~~~~a~~~l-----~~~vi~~~~~-~~------~------~~~~~p~n~~v~~~~p~~ 295 (406)
T COG1819 237 RPIVYVSLGTVGNA---VELLAIVLEALADL-----DVRVIVSLGG-AR------D------TLVNVPDNVIVADYVPQL 295 (406)
T ss_pred CCeEEEEcCCcccH---HHHHHHHHHHHhcC-----CcEEEEeccc-cc------c------ccccCCCceEEecCCCHH
Confidence 34555566665544 33444443333332 7777777754 21 1 112347899999999776
Q ss_pred HHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCC---ccceecccCCccceeecC----CHHHHHHHHHHH
Q 012436 348 DLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGP---KMDIVLEEDGQQTGFLAQ----NAEEYADAIVKI 420 (464)
Q Consensus 348 ~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~---~~~~v~~~~~~~~g~~~~----~~~~la~~i~~l 420 (464)
+ ++..||++|+. |...++.||+.+|+|+|+-..+.- .++.+++ -+.|...+ +++.++++|.++
T Consensus 296 ~---~l~~ad~vI~h----GG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~---~G~G~~l~~~~l~~~~l~~av~~v 365 (406)
T COG1819 296 E---LLPRADAVIHH----GGAGTTSEALYAGVPLVVIPDGADQPLNAERVEE---LGAGIALPFEELTEERLRAAVNEV 365 (406)
T ss_pred H---HhhhcCEEEec----CCcchHHHHHHcCCCEEEecCCcchhHHHHHHHH---cCCceecCcccCCHHHHHHHHHHH
Confidence 6 69999999965 344589999999999999765532 1223444 45664443 999999999999
Q ss_pred HcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q 012436 421 ISMPETERLEMAAAARRRAARFSEQRFYEDFKAAI 455 (464)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 455 (464)
++ |+..++...+..+...+.-..+..++.+.+..
T Consensus 366 L~-~~~~~~~~~~~~~~~~~~~g~~~~a~~le~~~ 399 (406)
T COG1819 366 LA-DDSYRRAAERLAEEFKEEDGPAKAADLLEEFA 399 (406)
T ss_pred hc-CHHHHHHHHHHHHHhhhcccHHHHHHHHHHHH
Confidence 98 87655544443333334455444444444443
|
|
| >PRK10017 colanic acid biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=98.92 E-value=3.2e-06 Score=81.66 Aligned_cols=348 Identities=12% Similarity=0.057 Sum_probs=178.1
Q ss_pred ceEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCch---------hHHHHHHhhcCc-ccCCCceeee
Q 012436 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPD---------SLLARAVDRFGV-ELLHPPKVVH 104 (464)
Q Consensus 35 mkI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~---------~~~~~~~~~~~~-~~~~~~~~~~ 104 (464)
|||+++-.+....-|-|..+..+++.|.+..+++++++++..+..+.. ..+-..+..++. .+. .++..
T Consensus 1 ~~i~i~G~~g~~N~GdeAil~~ii~~l~~~~p~~~i~v~S~~P~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~ 78 (426)
T PRK10017 1 MKLLILGNHTCGNRGDSAILRGLLDAINILNPHAEVDVMSRYPVSSSWLLNRPVMGDPLFLQMKQHNSAAGVV--GRVKK 78 (426)
T ss_pred CeEEEEccccCCCccHHHHHHHHHHHHHhhCCCCeEEEEecCccchhhhcccccccchhhhhhhhcccccccc--hhHHH
Confidence 789998766654469999999999999999999999999987643220 011111111110 000 00000
Q ss_pred eeccccccccc-----CcceehhhhchhhhHHHHHHhhhcCCcEEEeccccccc---------ch-hhhccCceEEEEee
Q 012436 105 LYRRKWIEEST-----YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFT---------YP-LARIFGCRVICYTH 169 (464)
Q Consensus 105 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~---------~~-~~~~~~~p~v~~~h 169 (464)
...+.|.+.-. +...+.............+.++ +.|++++..+..+. +. ++++.|+|++++-+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~aDlvI~gGG~lfqD~y~~~~~~y~l~A~l~gkpv~l~gq 156 (426)
T PRK10017 79 VLRRRYQHQVLLSRVTDTGKLRNIAIAQGFTDFVRLLS--GYDAIIQVGGSFFVDLYGVPQFEHALCAFMAKKPLYMIGH 156 (426)
T ss_pred HHHhhhhHHHHHhhhccccccccccchhhHHHHHHHHH--hCCEEEECCCCccccCcccHHHHHHHHHHHcCCCEEEECC
Confidence 00011100000 0000000000001111122222 56888854433221 11 55688999999877
Q ss_pred CCcchhhhhhcccccccccCCCcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCC-CCCeEE
Q 012436 170 YPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKR 248 (464)
Q Consensus 170 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~-~~~i~~ 248 (464)
+.. ++. .+....+.+.+++++|.|.+=.+...+.+++. |. ..++.+
T Consensus 157 siG-------------------------Pf~-------~~~~r~l~r~vl~~~~~ItvRD~~S~~~Lk~l-Gv~~~~v~~ 203 (426)
T PRK10017 157 SVG-------------------------PFQ-------DEQFNQLANYVFGHCDALILRESVSLDLMKRS-NITTAKVEH 203 (426)
T ss_pred cCC-------------------------CcC-------CHHHHHHHHHHHhcCCEEEEccHHHHHHHHHh-CCCccceEE
Confidence 321 011 11223456777899999999899999999776 55 356666
Q ss_pred ecCCCC-CCC--Cc--cC----C-CCCCCCCcEEEEE-eccCCC-C--C-----h-HHHHHHHHHHHHHhcCCCCCcEEE
Q 012436 249 VYPPCD-TSG--LQ--VL----P-LERSTEYPAIISV-AQFRPE-K--A-----H-PLQLEAFSVALRKLDADLPRPRLQ 308 (464)
Q Consensus 249 i~~~~d-~~~--~~--~~----~-~~~~~~~~~i~~~-G~~~~~-K--~-----~-~~ll~a~~~l~~~~~~~~p~~~l~ 308 (464)
.+.++- .+. .. +. . ......+.+|+.. ..+.+. + + . ..+.+++..+.++ +.+++
T Consensus 204 ~aDpAF~L~~~~~~~~~~~~~~~~~~~~~~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~~------g~~Vv 277 (426)
T PRK10017 204 GVDTAWLVDHHTEDFTASYAVQHWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRIIDE------GYQVI 277 (426)
T ss_pred ecChhhhCCccccccccchhhhhhhcccccCCEEEEEecccccccccccccHHHHHHHHHHHHHHHHHC------CCeEE
Confidence 554321 110 00 00 0 0001223444443 323211 1 1 1 3444555555443 45555
Q ss_pred EEcCCC-----CCccHHHHHHHHHHHHhcCCCCcEEE-ccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcE
Q 012436 309 FVGSCR-----NKSDEERLQSLKDKSIELKVDGNVEF-YKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIP 382 (464)
Q Consensus 309 i~G~~~-----~~~~~~~~~~l~~~~~~~~l~~~v~~-~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~Pv 382 (464)
++-... .++|.....++.+.. .-++++++ .+..+..|+..++++||++|..-. -+++=|++.|+|+
T Consensus 278 ~lp~~~~~~~~~~dD~~~~~~l~~~~---~~~~~~~vi~~~~~~~e~~~iIs~~dl~ig~Rl-----Ha~I~a~~~gvP~ 349 (426)
T PRK10017 278 ALSTCTGIDSYNKDDRMVALNLRQHV---SDPARYHVVMDELNDLEMGKILGACELTVGTRL-----HSAIISMNFGTPA 349 (426)
T ss_pred EEecccCccCCCCchHHHHHHHHHhc---ccccceeEecCCCChHHHHHHHhhCCEEEEecc-----hHHHHHHHcCCCE
Confidence 554321 222333334444433 32334433 444566799999999999885522 2467799999999
Q ss_pred EEeCCCCCccceecccCCccceeec---C-CHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 012436 383 IAHNSAGPKMDIVLEEDGQQTGFLA---Q-NAEEYADAIVKIISMPETERLEMAAAAR 436 (464)
Q Consensus 383 I~~~~~~~~~~~v~~~~~~~~g~~~---~-~~~~la~~i~~l~~~~~~~~~~~~~~~~ 436 (464)
|+-....=...+.... |...+.. + +.+++.+.+.++++ +.+..++.-..+.
T Consensus 350 i~i~Y~~K~~~~~~~l--g~~~~~~~~~~l~~~~Li~~v~~~~~-~r~~~~~~l~~~v 404 (426)
T PRK10017 350 IAINYEHKSAGIMQQL--GLPEMAIDIRHLLDGSLQAMVADTLG-QLPALNARLAEAV 404 (426)
T ss_pred EEeeehHHHHHHHHHc--CCccEEechhhCCHHHHHHHHHHHHh-CHHHHHHHHHHHH
Confidence 9976432112222220 1122322 2 78899999999999 8776554443333
|
|
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=98.87 E-value=2.6e-07 Score=90.73 Aligned_cols=252 Identities=15% Similarity=0.109 Sum_probs=144.1
Q ss_pred hhHHHHHHhhhcCCcEEEecccccccchhhh---ccCc--eEEEEeeCCcchhhhhhcccccccccCCCcccccchhhhH
Q 012436 128 SVYLSWEALCKFTPLYYFDTSGYAFTYPLAR---IFGC--RVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQ 202 (464)
Q Consensus 128 ~~~~~~~~l~~~~~Dvv~~~~~~~~~~~~~~---~~~~--p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (464)
......+.+++.+||+++.-....+.+.+++ ..|+ |++.|+- | .+|. |..
T Consensus 298 ~~~~l~~~i~~~kPD~vIlID~PgFNlrLAK~lkk~Gi~ipviyYVs-P--------qVWA---------------WR~- 352 (608)
T PRK01021 298 RYRKLYKTILKTNPRTVICIDFPDFHFLLIKKLRKRGYKGKIVHYVC-P--------SIWA---------------WRP- 352 (608)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEEC-c--------ccee---------------eCc-
Confidence 3445556677889998886666566655444 5664 8877765 2 2230 100
Q ss_pred HHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCC-CCCCCccC------CCCCC-CCCcEEEE
Q 012436 203 CKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPC-DTSGLQVL------PLERS-TEYPAIIS 274 (464)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~-d~~~~~~~------~~~~~-~~~~~i~~ 274 (464)
+ | -+.+-+.+|.++|.=++..+.+++. .-+++.+.+|. |.-...+. ....+ +++.+.+.
T Consensus 353 -~----R-----ikki~k~vD~ll~IfPFE~~~y~~~---gv~v~yVGHPL~d~i~~~~~~~~~r~~lgl~~~~~iIaLL 419 (608)
T PRK01021 353 -K----R-----KTILEKYLDLLLLILPFEQNLFKDS---PLRTVYLGHPLVETISSFSPNLSWKEQLHLPSDKPIVAAF 419 (608)
T ss_pred -c----h-----HHHHHHHhhhheecCccCHHHHHhc---CCCeEEECCcHHhhcccCCCHHHHHHHcCCCCCCCEEEEE
Confidence 0 0 1333478899999999999999885 34677788875 32111100 01112 33445566
Q ss_pred EeccC--CCCChHHHHHHHH--HHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHH
Q 012436 275 VAQFR--PEKAHPLQLEAFS--VALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLV 350 (464)
Q Consensus 275 ~G~~~--~~K~~~~ll~a~~--~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~ 350 (464)
.|+-. -.+....++++++ .+. ++.++++....+ ...+.+++..+..+. ..+.+... ++-.
T Consensus 420 PGSR~~EI~rllPv~l~aa~~~~l~-------~~l~fvvp~a~~-----~~~~~i~~~~~~~~~-~~~~ii~~---~~~~ 483 (608)
T PRK01021 420 PGSRRGDILRNLTIQVQAFLASSLA-------STHQLLVSSANP-----KYDHLILEVLQQEGC-LHSHIVPS---QFRY 483 (608)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhc-------cCeEEEEecCch-----hhHHHHHHHHhhcCC-CCeEEecC---cchH
Confidence 77532 2356677777776 332 267777754322 122445555543321 12333321 1236
Q ss_pred HHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEe-CCCCCcc----ceec---ccC------Cccc---eee---cC-C
Q 012436 351 KLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAH-NSAGPKM----DIVL---EED------GQQT---GFL---AQ-N 409 (464)
Q Consensus 351 ~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~-~~~~~~~----~~v~---~~~------~~~~---g~~---~~-~ 409 (464)
+.+++||+.+..| |++.+|++.+|+|.|+. ....... -+++ +.. .+.. -++ .+ +
T Consensus 484 ~~m~aaD~aLaaS-----GTaTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPEllqgQ~~~t 558 (608)
T PRK01021 484 ELMRECDCALAKC-----GTIVLETALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFPEFIGGKKDFQ 558 (608)
T ss_pred HHHHhcCeeeecC-----CHHHHHHHHhCCCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcchhhcCCcccCC
Confidence 8999999999775 88999999999999984 2221100 0011 000 0111 133 13 8
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q 012436 410 AEEYADAIVKIISMPETERLEMAAAARRRAA 440 (464)
Q Consensus 410 ~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~ 440 (464)
++.+++++ +++. |++.++++.++..+..+
T Consensus 559 pe~La~~l-~lL~-d~~~r~~~~~~l~~lr~ 587 (608)
T PRK01021 559 PEEVAAAL-DILK-TSQSKEKQKDACRDLYQ 587 (608)
T ss_pred HHHHHHHH-HHhc-CHHHHHHHHHHHHHHHH
Confidence 99999996 8888 88877777766554433
|
|
| >PRK14089 ipid-A-disaccharide synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.68 E-value=1.2e-06 Score=82.10 Aligned_cols=180 Identities=15% Similarity=0.102 Sum_probs=106.0
Q ss_pred cCCcEEEecccccccchhhh---cc--CceEEEEeeCCcchhhhhhcccccccccCCCcccccchhhhHHHHHHHHHHHH
Q 012436 139 FTPLYYFDTSGYAFTYPLAR---IF--GCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSW 213 (464)
Q Consensus 139 ~~~Dvv~~~~~~~~~~~~~~---~~--~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (464)
.+||+++......+.+.+++ .. ++|++.|+- | .+|. |.. ++
T Consensus 75 ~~pd~~i~iD~p~Fnl~lak~~k~~~~~i~viyyi~-P--------qvWA---------------Wr~--~R-------- 120 (347)
T PRK14089 75 KQADKVLLMDSSSFNIPLAKKIKKAYPKKEIIYYIL-P--------QVWA---------------WKK--GR-------- 120 (347)
T ss_pred cCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEEC-c--------ccee---------------eCc--ch--------
Confidence 58998886666566665444 34 799888765 2 2230 100 00
Q ss_pred HHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCCCCCCCCCcEEEEEeccC--CCCChHHHHHHH
Q 012436 214 MYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFR--PEKAHPLQLEAF 291 (464)
Q Consensus 214 ~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~~~~~~~~~~i~~~G~~~--~~K~~~~ll~a~ 291 (464)
-+.+.+.+|.+.+.-++..+.+ + .+..++.||+-.. ....+....+++.+.++.|+-. -.+.+..+++++
T Consensus 121 -~~~i~k~~d~vl~ifPFE~~~y----g--~~~~~VGhPl~d~-~~~~~~~~~~~~~I~llPGSR~~Ei~~llP~~~~aa 192 (347)
T PRK14089 121 -AKILEKYCDFLASILPFEVQFY----Q--SKATYVGHPLLDE-IKEFKKDLDKEGTIAFMPGSRKSEIKRLMPIFKELA 192 (347)
T ss_pred -HHHHHHHHhhhhccCCCCHHHh----C--CCCEEECCcHHHh-hhhhhhhcCCCCEEEEECCCCHHHHHHHHHHHHHHH
Confidence 1333477888888888777766 3 3556788885322 1111111122333444555432 124556677888
Q ss_pred HHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChH
Q 012436 292 SVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGIS 371 (464)
Q Consensus 292 ~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~ 371 (464)
.++.++ ...+++.|.... +.+++...+. ..+.+.+ +..+.|+.||+.+..| |.+
T Consensus 193 ~~L~~~------~~~~~i~~a~~~-------~~i~~~~~~~---~~~~~~~-----~~~~~m~~aDlal~~S-----GT~ 246 (347)
T PRK14089 193 KKLEGK------EKILVVPSFFKG-------KDLKEIYGDI---SEFEISY-----DTHKALLEAEFAFICS-----GTA 246 (347)
T ss_pred HHHhhc------CcEEEEeCCCcH-------HHHHHHHhcC---CCcEEec-----cHHHHHHhhhHHHhcC-----cHH
Confidence 887653 367777776431 3444444332 2344442 4568999999988765 777
Q ss_pred HHHHHHhCCcEEEeC
Q 012436 372 VVEYMAAGAIPIAHN 386 (464)
Q Consensus 372 ~~Ea~a~G~PvI~~~ 386 (464)
.+|++.+|+|.|..-
T Consensus 247 TLE~al~g~P~Vv~Y 261 (347)
T PRK14089 247 TLEAALIGTPFVLAY 261 (347)
T ss_pred HHHHHHhCCCEEEEE
Confidence 789999999999853
|
|
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.66 E-value=3.7e-06 Score=80.91 Aligned_cols=179 Identities=13% Similarity=0.164 Sum_probs=125.4
Q ss_pred CCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCC-CcEEEccCCC
Q 012436 267 TEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVD-GNVEFYKNLL 345 (464)
Q Consensus 267 ~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~-~~v~~~g~~~ 345 (464)
++.+++..+. .-.|--...++.+..+.++. |+-.|++..-..-.+ +.++..+.++|++ ++|.|..-..
T Consensus 757 ~d~vvf~~FN--qLyKidP~~l~~W~~ILk~V----PnS~LwllrfPa~ge-----~rf~ty~~~~Gl~p~riifs~va~ 825 (966)
T KOG4626|consen 757 EDAVVFCNFN--QLYKIDPSTLQMWANILKRV----PNSVLWLLRFPAVGE-----QRFRTYAEQLGLEPDRIIFSPVAA 825 (966)
T ss_pred CCeEEEeech--hhhcCCHHHHHHHHHHHHhC----CcceeEEEeccccch-----HHHHHHHHHhCCCccceeeccccc
Confidence 4434444443 33454566788888888877 677777776533221 6888999999985 5788887777
Q ss_pred hhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccc----eecccCCccce-eecCCHHHHHHHHHHH
Q 012436 346 YRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMD----IVLEEDGQQTG-FLAQNAEEYADAIVKI 420 (464)
Q Consensus 346 ~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~----~v~~~~~~~~g-~~~~~~~~la~~i~~l 420 (464)
.+|-.+-.+-+|+.+-+....| -.+-+|.+.+|+|+|.-.....+.. .+.. -+.| +++.+.++..+.-.++
T Consensus 826 k~eHvrr~~LaDv~LDTplcnG-hTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~---~Gl~hliak~~eEY~~iaV~L 901 (966)
T KOG4626|consen 826 KEEHVRRGQLADVCLDTPLCNG-HTTGMDVLWAGVPMVTMPGETLASRVAASLLTA---LGLGHLIAKNREEYVQIAVRL 901 (966)
T ss_pred hHHHHHhhhhhhhcccCcCcCC-cccchhhhccCCceeecccHHHHHHHHHHHHHH---cccHHHHhhhHHHHHHHHHHh
Confidence 8888888999999987755443 2356899999999998553322111 1111 2333 4446899999998999
Q ss_pred HcCCHHHHHHHHHHHHHHH---HccCHHHHHHHHHHHHHHHHhh
Q 012436 421 ISMPETERLEMAAAARRRA---ARFSEQRFYEDFKAAIRPILCH 461 (464)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~---~~~s~~~~~~~~~~~~~~~~~~ 461 (464)
.. |.+..+++....+... .-|+-.+++..+++.|.++.++
T Consensus 902 at-d~~~L~~lr~~l~~~r~~splfd~~q~~~~LE~~y~~MW~~ 944 (966)
T KOG4626|consen 902 AT-DKEYLKKLRAKLRKARASSPLFDTKQYAKGLERLYLQMWKK 944 (966)
T ss_pred hc-CHHHHHHHHHHHHHHhcCCCccCchHHHHHHHHHHHHHHHH
Confidence 98 9998888887776544 3599999999999998887653
|
|
| >KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.66 E-value=5.8e-07 Score=82.86 Aligned_cols=238 Identities=13% Similarity=0.115 Sum_probs=141.1
Q ss_pred HHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCCCCC-------------------------CCC
Q 012436 214 MYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLER-------------------------STE 268 (464)
Q Consensus 214 ~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~~~~-------------------------~~~ 268 (464)
+|+.+...|+.+.++|+-.+-..+........ .+.|||.+...|...-.-+ -++
T Consensus 245 ~ERaa~h~AhVFTTVSeITa~EAeHlLkRKPD-~itPNGLNV~KFsA~HEFQNLHA~~KekIndFVRGHF~GhlDFdLdk 323 (692)
T KOG3742|consen 245 LERAAAHTAHVFTTVSEITALEAEHLLKRKPD-VITPNGLNVKKFSAVHEFQNLHAQKKEKINDFVRGHFHGHLDFDLDK 323 (692)
T ss_pred HHHHhhhhhhhhhhHHHHHHHHHHHHHhcCCC-eeCCCCcceeehhHHHHHHHHHHHHHHHHHHHhhhhccccccccccc
Confidence 67888888999999998776555554432222 3589999988775211000 044
Q ss_pred CcEEEEEeccC-CCCChHHHHHHHHHHHHHhcCCCCC---cEEEEEcCCCCCc------cHHHHHHHHH-----------
Q 012436 269 YPAIISVAQFR-PEKAHPLQLEAFSVALRKLDADLPR---PRLQFVGSCRNKS------DEERLQSLKD----------- 327 (464)
Q Consensus 269 ~~~i~~~G~~~-~~K~~~~ll~a~~~l~~~~~~~~p~---~~l~i~G~~~~~~------~~~~~~~l~~----------- 327 (464)
..+++.+||.+ ..||-|.+|+++++|.-..+....+ +.|.|.-...+.- .+....+|.+
T Consensus 324 TlyfFiAGRYEf~NKGaDmFiEsLaRLN~~Lk~~~s~~TVVaFlImPaktN~FnVesLkgqAv~kqL~dtv~~Vk~~~Gk 403 (692)
T KOG3742|consen 324 TLYFFIAGRYEFSNKGADMFIESLARLNYLLKVSGSPKTVVAFLIMPAKTNSFNVESLKGQAVRKQLWDTVNEVKEKVGK 403 (692)
T ss_pred eEEEEEeeeeeeccCchHHHHHHHHHhHHHHeecCCCceEEEEEEeecCCCccchhhhccHHHHHHHHHHHHHHHHHHHH
Confidence 56778889885 6799999999999985443211012 2233332211100 0000011110
Q ss_pred ----------------------------H----------------------------HHhcCC----CCcE--EEccC--
Q 012436 328 ----------------------------K----------------------------SIELKV----DGNV--EFYKN-- 343 (464)
Q Consensus 328 ----------------------------~----------------------------~~~~~l----~~~v--~~~g~-- 343 (464)
. +++.++ .++| .|++.
T Consensus 404 rifd~~l~g~lPd~~ell~~~d~v~lKr~i~a~~r~slPPv~THNm~dDa~DpiL~~iRr~~LFN~~~DRVKvifHPEFL 483 (692)
T KOG3742|consen 404 RIFDHCLRGELPDLDELLDKDDLVLLKRCIFALQRQSLPPVCTHNMIDDANDPILSSIRRIGLFNSPSDRVKVIFHPEFL 483 (692)
T ss_pred HHHHHHhcccCCChHHhhChhHHHHHHHHHHHhccCCCCCceeccccccccchHHHHhHhhhcccCcccceEEEecHHHh
Confidence 0 011110 0233 33321
Q ss_pred -----CChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCC---ccceecccCCcccee-ecC------
Q 012436 344 -----LLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGP---KMDIVLEEDGQQTGF-LAQ------ 408 (464)
Q Consensus 344 -----~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~---~~~~v~~~~~~~~g~-~~~------ 408 (464)
+=.-|..++.+.|++.|+||.+|++|.+..|.--+|+|.|+|+..|. ++|.+.+. ...|+ +++
T Consensus 484 ss~sPllglDYeeFVRGCHLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSGFGcfMeehi~d~--~ayGIYIvDRRfks~ 561 (692)
T KOG3742|consen 484 SSTSPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEEHIEDP--QAYGIYIVDRRFKSP 561 (692)
T ss_pred ccCCCCcCCCHHHHhccccccccccccCCCCCCchheEEeccccccccccchhhhHHHHhcCc--hhceEEEEecccCCh
Confidence 11237778899999999999999999999999999999999987654 34444431 23453 332
Q ss_pred --CHHHHHHHHHHHHcCCHHHHHHHHHHHH-HHH-HccCHHHHHHHHHHHHH
Q 012436 409 --NAEEYADAIVKIISMPETERLEMAAAAR-RRA-ARFSEQRFYEDFKAAIR 456 (464)
Q Consensus 409 --~~~~la~~i~~l~~~~~~~~~~~~~~~~-~~~-~~~s~~~~~~~~~~~~~ 456 (464)
+.+++++-+.++.. ...++++.++.+ +.+ .-.+|..+-..|.+.=.
T Consensus 562 deSv~qL~~~m~~F~~--qsRRQRIiqRNrtErLSdLLDWk~lG~~Y~~aR~ 611 (692)
T KOG3742|consen 562 DESVQQLASFMYEFCK--QSRRQRIIQRNRTERLSDLLDWKYLGRYYRKARH 611 (692)
T ss_pred hhHHHHHHHHHHHHHH--HHHHHHHHHhcchhhHHHHHhHHHHhHHHHHHHH
Confidence 56667777777764 334555544433 445 67888888776665443
|
|
| >COG4671 Predicted glycosyl transferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.53 E-value=5.6e-05 Score=68.44 Aligned_cols=333 Identities=16% Similarity=0.155 Sum_probs=171.5
Q ss_pred ccccceEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeecccc
Q 012436 31 RNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKW 110 (464)
Q Consensus 31 ~~~~mkI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (464)
..+.+||+|.+++.-.- |.-+....+|.+|.+.-.+.+|+++++...... ...+..+.++.++.-..
T Consensus 6 ~~~~~Ri~~Yshd~~Gl-GHlrR~~~Ia~aLv~d~~~~~Il~IsG~~~~~~------------F~~~~gVd~V~LPsl~k 72 (400)
T COG4671 6 ASKRPRILFYSHDLLGL-GHLRRALRIAHALVEDYLGFDILIISGGPPAGG------------FPGPAGVDFVKLPSLIK 72 (400)
T ss_pred hhccceEEEEehhhccc-hHHHHHHHHHHHHhhcccCceEEEEeCCCccCC------------CCCcccCceEecCceEe
Confidence 34556999776655434 688888999999999844488899888652211 11112223333322111
Q ss_pred cccccCcceehh--hhchhh--hHHHHHHhhhcCCcEEEe-cccccccc---h---hhhccCceEEEEeeCCcchhhhhh
Q 012436 111 IEESTYPRFTMI--GQSFGS--VYLSWEALCKFTPLYYFD-TSGYAFTY---P---LARIFGCRVICYTHYPTISLDMIS 179 (464)
Q Consensus 111 ~~~~~~~~~~~~--~~~~~~--~~~~~~~l~~~~~Dvv~~-~~~~~~~~---~---~~~~~~~p~v~~~h~p~~~~~~~~ 179 (464)
..+..+.....- ..-+.. .......++.++||+++. ...+..-. + ..+..+.+.+.-+. ++.+
T Consensus 73 ~~~G~~~~~d~~~~l~e~~~~Rs~lil~t~~~fkPDi~IVd~~P~Glr~EL~ptL~yl~~~~t~~vL~lr------~i~D 146 (400)
T COG4671 73 GDNGEYGLVDLDGDLEETKKLRSQLILSTAETFKPDIFIVDKFPFGLRFELLPTLEYLKTTGTRLVLGLR------SIRD 146 (400)
T ss_pred cCCCceeeeecCCCHHHHHHHHHHHHHHHHHhcCCCEEEEeccccchhhhhhHHHHHHhhcCCcceeehH------hhhh
Confidence 111111110000 000111 112334577889998872 22222110 1 11222323333222 1111
Q ss_pred cccccccccCCCcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCC--CeEEecCCCCCCC
Q 012436 180 RVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPD--RIKRVYPPCDTSG 257 (464)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~--~i~~i~~~~d~~~ 257 (464)
..... ...|.. ...++.+-++.|.|++..+-.-..+.+.|+... +-.+.+-|+--..
T Consensus 147 ~p~~~-----------~~~w~~----------~~~~~~I~r~yD~V~v~GdP~f~d~~~~~~~~~~i~~k~~ytG~vq~~ 205 (400)
T COG4671 147 IPQEL-----------EADWRR----------AETVRLINRFYDLVLVYGDPDFYDPLTEFPFAPAIRAKMRYTGFVQRS 205 (400)
T ss_pred chhhh-----------ccchhh----------hHHHHHHHHhheEEEEecCccccChhhcCCccHhhhhheeEeEEeecc
Confidence 11000 001110 112344457889999998877766666666521 2233454542111
Q ss_pred C--ccCCCCC-CCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcE---EEEEcCCCCCccHHHHHHHHHHHHh
Q 012436 258 L--QVLPLER-STEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPR---LQFVGSCRNKSDEERLQSLKDKSIE 331 (464)
Q Consensus 258 ~--~~~~~~~-~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~---l~i~G~~~~~~~~~~~~~l~~~~~~ 331 (464)
. ...+... .++..+++.+| ...-|-+.+-.++...... |+++ +++.|.- .. +.-++.+...+.+
T Consensus 206 ~~~~~~p~~~~pE~~~Ilvs~G--GG~dG~eLi~~~l~A~~~l-----~~l~~~~~ivtGP~-MP--~~~r~~l~~~A~~ 275 (400)
T COG4671 206 LPHLPLPPHEAPEGFDILVSVG--GGADGAELIETALAAAQLL-----AGLNHKWLIVTGPF-MP--EAQRQKLLASAPK 275 (400)
T ss_pred CcCCCCCCcCCCccceEEEecC--CChhhHHHHHHHHHHhhhC-----CCCCcceEEEeCCC-CC--HHHHHHHHHhccc
Confidence 1 1112222 34456677777 4555655544444433321 2333 4555542 21 2334555555543
Q ss_pred cCCCCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccce-ecccCC---ccceeec
Q 012436 332 LKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDI-VLEEDG---QQTGFLA 407 (464)
Q Consensus 332 ~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~-v~~~~~---~~~g~~~ 407 (464)
.++|++..+. .++.++++.|+..|.- .| =+++.|-+++|||.+.-......+|- +.-.-- |-...+.
T Consensus 276 ---~p~i~I~~f~--~~~~~ll~gA~~vVSm---~G-YNTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL~ 346 (400)
T COG4671 276 ---RPHISIFEFR--NDFESLLAGARLVVSM---GG-YNTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVLL 346 (400)
T ss_pred ---CCCeEEEEhh--hhHHHHHHhhheeeec---cc-chhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceeeC
Confidence 4689999998 9999999999998854 23 35789999999999887655443332 211000 2223333
Q ss_pred C---CHHHHHHHHHHHHc
Q 012436 408 Q---NAEEYADAIVKIIS 422 (464)
Q Consensus 408 ~---~~~~la~~i~~l~~ 422 (464)
+ +++.++++|..+++
T Consensus 347 pe~lt~~~La~al~~~l~ 364 (400)
T COG4671 347 PENLTPQNLADALKAALA 364 (400)
T ss_pred cccCChHHHHHHHHhccc
Confidence 3 89999999998886
|
|
| >PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.6e-06 Score=70.85 Aligned_cols=135 Identities=14% Similarity=0.170 Sum_probs=77.7
Q ss_pred eEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeeccccccccc
Q 012436 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (464)
Q Consensus 36 kI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (464)
||+++.... +.++.+++++|.+.|++++ +++...+. ... .. ..++.++.++... .
T Consensus 1 KIl~i~~~~------~~~~~~~~~~L~~~g~~V~--ii~~~~~~--~~~----~~------~~~i~~~~~~~~~-----k 55 (139)
T PF13477_consen 1 KILLIGNTP------STFIYNLAKELKKRGYDVH--IITPRNDY--EKY----EI------IEGIKVIRLPSPR-----K 55 (139)
T ss_pred CEEEEecCc------HHHHHHHHHHHHHCCCEEE--EEEcCCCc--hhh----hH------hCCeEEEEecCCC-----C
Confidence 577776543 4578899999999995555 44443211 111 10 1122444443110 0
Q ss_pred CcceehhhhchhhhHHHHHHhhhcCCcEEEecccccc-cch--hhhccC-ceEEEEeeCCcchhhhhhcccccccccCCC
Q 012436 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAF-TYP--LARIFG-CRVICYTHYPTISLDMISRVREGSSMYNNN 191 (464)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~-~~~--~~~~~~-~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~ 191 (464)
. ....+. +....+.+++.+||+||++...+. .++ +++..+ +|+|++.|+... +..
T Consensus 56 -~----~~~~~~-~~~l~k~ik~~~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~hg~~~--------------~~~- 114 (139)
T PF13477_consen 56 -S----PLNYIK-YFRLRKIIKKEKPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVHGSDF--------------YNS- 114 (139)
T ss_pred -c----cHHHHH-HHHHHHHhccCCCCEEEEecCChHHHHHHHHHHHcCCCCEEEEecCCee--------------ecC-
Confidence 0 111222 346778899999999998887653 333 345677 899999994321 000
Q ss_pred cccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcC
Q 012436 192 ASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNS 229 (464)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S 229 (464)
.. ..+...++.+.+++++|.+++.|
T Consensus 115 ---------~~----~~~~~~~~~~~~~k~~~~ii~~~ 139 (139)
T PF13477_consen 115 ---------SK----KKKLKKFIIKFAFKRADKIIVQS 139 (139)
T ss_pred ---------Cc----hHHHHHHHHHHHHHhCCEEEEcC
Confidence 00 01134456788889999999876
|
|
| >PLN02448 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=98.44 E-value=0.00035 Score=68.98 Aligned_cols=140 Identities=16% Similarity=0.081 Sum_probs=78.1
Q ss_pred CCcEEEEEeccCCC--CChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCC
Q 012436 268 EYPAIISVAQFRPE--KAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLL 345 (464)
Q Consensus 268 ~~~~i~~~G~~~~~--K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~ 345 (464)
+..+++.+|+.... +.+..++++++.. +..++++..++. ..+.+.. .+++.+.+++|
T Consensus 274 ~~vvyvsfGs~~~~~~~~~~~~~~~l~~~---------~~~~lw~~~~~~-------~~~~~~~-----~~~~~v~~w~p 332 (459)
T PLN02448 274 GSVLYVSLGSFLSVSSAQMDEIAAGLRDS---------GVRFLWVARGEA-------SRLKEIC-----GDMGLVVPWCD 332 (459)
T ss_pred CceEEEeecccccCCHHHHHHHHHHHHhC---------CCCEEEEEcCch-------hhHhHhc-----cCCEEEeccCC
Confidence 34567777876332 2233444444332 556666554321 1222222 24778889998
Q ss_pred hhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCcc---ceecccCCccceeec---------CCHHHH
Q 012436 346 YRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKM---DIVLEEDGQQTGFLA---------QNAEEY 413 (464)
Q Consensus 346 ~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~---~~v~~~~~~~~g~~~---------~~~~~l 413 (464)
+.++ |+..++..+- . .+.-.+++||+++|+|+|+-...+.-. ..+.+. -+.|+-. -+.+++
T Consensus 333 Q~~i---L~h~~v~~fv-t-HgG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~--~g~G~~~~~~~~~~~~~~~~~l 405 (459)
T PLN02448 333 QLKV---LCHSSVGGFW-T-HCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVED--WKIGWRVKREVGEETLVGREEI 405 (459)
T ss_pred HHHH---hccCccceEE-e-cCchhHHHHHHHcCCCEEeccccccchhhHHHHHHH--hCceEEEecccccCCcCcHHHH
Confidence 7775 5566653222 1 233458999999999999976543211 112110 1234332 178899
Q ss_pred HHHHHHHHcCCH-HHHHHHHHHHH
Q 012436 414 ADAIVKIISMPE-TERLEMAAAAR 436 (464)
Q Consensus 414 a~~i~~l~~~~~-~~~~~~~~~~~ 436 (464)
++++++++. ++ ++-+++++++.
T Consensus 406 ~~av~~vl~-~~~~~~~~~r~~a~ 428 (459)
T PLN02448 406 AELVKRFMD-LESEEGKEMRRRAK 428 (459)
T ss_pred HHHHHHHhc-CCchhHHHHHHHHH
Confidence 999999998 64 33444444444
|
|
| >PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria | Back alignment and domain information |
|---|
Probab=98.42 E-value=4.5e-05 Score=73.44 Aligned_cols=212 Identities=17% Similarity=0.194 Sum_probs=105.2
Q ss_pred HhhcCCEEEEcCHHHHHHHHHHhCCCC-CeEEecCCCCC-CC-CccCC---------CCCCCCCcEEEEEeccCCCCCh-
Q 012436 218 VGSCADLAMVNSSWTQSHIEKLWGIPD-RIKRVYPPCDT-SG-LQVLP---------LERSTEYPAIISVAQFRPEKAH- 284 (464)
Q Consensus 218 ~~~~ad~vi~~S~~~~~~~~~~~~~~~-~i~~i~~~~d~-~~-~~~~~---------~~~~~~~~~i~~~G~~~~~K~~- 284 (464)
..+..|.+++.|+..++.+.+.++.+. ++ +..|..- +. +.... .....++.+|+|+-+++.....
T Consensus 131 ~~~~~d~~~~~s~~~~~~~~~~f~~~~~~i--~~~G~PR~D~l~~~~~~~~~~i~~~~~~~~~~k~ILyaPT~R~~~~~~ 208 (369)
T PF04464_consen 131 NYRNYDYFIVSSEFEKEIFKKAFGYPEDKI--LVTGYPRNDYLFNKSKENRNRIKKKLGIDKDKKVILYAPTWRDNSSNE 208 (369)
T ss_dssp HHTT-SEEEESSHHHHHHHHHHTT--GGGE--EES--GGGHHHHHSTT-HHHHHHHHTT--SS-EEEEEE----GGG--G
T ss_pred hccCCcEEEECCHHHHHHHHHHhccCcceE--EEeCCCeEhHHhccCHHHHHHHHHHhccCCCCcEEEEeeccccccccc
Confidence 448889999999999999999988743 45 3444321 11 11100 1122455689999765443222
Q ss_pred -----HHH--HHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHh-cCCCCcEEEccCCChhHHHHHHhcC
Q 012436 285 -----PLQ--LEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIE-LKVDGNVEFYKNLLYRDLVKLLGGA 356 (464)
Q Consensus 285 -----~~l--l~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~-~~l~~~v~~~g~~~~~~~~~~l~~a 356 (464)
... .+.+.. ... +++.+++-... ........ ....++|.+...- +++.+++..|
T Consensus 209 ~~~~~~~~~~~~~l~~-~~~-----~~~~li~k~Hp----------~~~~~~~~~~~~~~~i~~~~~~--~~~~~ll~~a 270 (369)
T PF04464_consen 209 YFKFFFSDLDFEKLNF-LLK-----NNYVLIIKPHP----------NMKKKFKDFKEDNSNIIFVSDN--EDIYDLLAAA 270 (369)
T ss_dssp GSS----TT-HHHHHH-HHT-----TTEEEEE--SH----------HHHTT----TT-TTTEEE-TT---S-HHHHHHT-
T ss_pred cccccccccCHHHHHH-HhC-----CCcEEEEEeCc----------hhhhchhhhhccCCcEEECCCC--CCHHHHHHhc
Confidence 111 222321 222 37777776542 12222221 2234677776654 5899999999
Q ss_pred cEEEEcCCCCCCChHHHHHHHhCCcEEEeC--CCCCc--cceecccCCccceeecCCHHHHHHHHHHHHcCCHHHHHHHH
Q 012436 357 VVGIHSMIDEHFGISVVEYMAAGAIPIAHN--SAGPK--MDIVLEEDGQQTGFLAQNAEEYADAIVKIISMPETERLEMA 432 (464)
Q Consensus 357 d~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~--~~~~~--~~~v~~~~~~~~g~~~~~~~~la~~i~~l~~~~~~~~~~~~ 432 (464)
|++|. .++-.+.|++.+++|||... ..... ..+..+......|-.+.+.++|.++|..+++ ++...++..
T Consensus 271 DiLIT-----DySSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~~~~~~pg~~~~~~~eL~~~i~~~~~-~~~~~~~~~ 344 (369)
T PF04464_consen 271 DILIT-----DYSSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFDYEEDLPGPIVYNFEELIEAIENIIE-NPDEYKEKR 344 (369)
T ss_dssp SEEEE-----SS-THHHHHGGGT--EEEE-TTTTTTTTTSSBSS-TTTSSSS-EESSHHHHHHHHTTHHH-HHHHTHHHH
T ss_pred CEEEE-----echhHHHHHHHhCCCEEEEeccHHHHhhccCCCCchHhhCCCceeCCHHHHHHHHHhhhh-CCHHHHHHH
Confidence 99883 45668999999999999653 21110 0111110013445666799999999999887 665544433
Q ss_pred HHHHHHHHccCHHHHHHHHHHHH
Q 012436 433 AAARRRAARFSEQRFYEDFKAAI 455 (464)
Q Consensus 433 ~~~~~~~~~~s~~~~~~~~~~~~ 455 (464)
+..++..-.+.-.+.++++.+.+
T Consensus 345 ~~~~~~~~~~~Dg~s~eri~~~I 367 (369)
T PF04464_consen 345 EKFRDKFFKYNDGNSSERIVNYI 367 (369)
T ss_dssp HHHHHHHSTT--S-HHHHHHHHH
T ss_pred HHHHHHhCCCCCchHHHHHHHHH
Confidence 33343332344455666665554
|
They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D. |
| >COG1817 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=98.39 E-value=0.00015 Score=64.68 Aligned_cols=293 Identities=13% Similarity=0.080 Sum_probs=160.9
Q ss_pred ceEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeecccccccc
Q 012436 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (464)
Q Consensus 35 mkI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (464)
|||.|-..+. -..++...+...|.+.| ++|.+.+.+.+ ...+..+.+|+.. ..+.. ....+
T Consensus 1 mkVwiDI~n~----~hvhfFk~lI~elekkG--~ev~iT~rd~~-----~v~~LLd~ygf~~------~~Igk--~g~~t 61 (346)
T COG1817 1 MKVWIDIGNP----PHVHFFKNLIWELEKKG--HEVLITCRDFG-----VVTELLDLYGFPY------KSIGK--HGGVT 61 (346)
T ss_pred CeEEEEcCCc----chhhHHHHHHHHHHhCC--eEEEEEEeecC-----cHHHHHHHhCCCe------Eeecc--cCCcc
Confidence 5777654443 35678899999999999 66666665532 2223344455522 11111 10000
Q ss_pred cCcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccch-hhhccCceEEEEeeCCcchhhhhhcccccccccCCCcc
Q 012436 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNAS 193 (464)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~-~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~ 193 (464)
.-..+..+......+.+++.+++||+.+.-. +..++ ++...|+|.++....+..
T Consensus 62 ---l~~Kl~~~~eR~~~L~ki~~~~kpdv~i~~~--s~~l~rvafgLg~psIi~~D~ehA-------------------- 116 (346)
T COG1817 62 ---LKEKLLESAERVYKLSKIIAEFKPDVAIGKH--SPELPRVAFGLGIPSIIFVDNEHA-------------------- 116 (346)
T ss_pred ---HHHHHHHHHHHHHHHHHHHhhcCCceEeecC--CcchhhHHhhcCCceEEecCChhH--------------------
Confidence 0001122233345566778899999998522 22223 666789999997764331
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCC-----------CCCCccCC
Q 012436 194 IAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCD-----------TSGLQVLP 262 (464)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d-----------~~~~~~~~ 262 (464)
....+..+..||.+++++....+.+...+..+.++ .-+||+- .+.+....
T Consensus 117 ------------------~~qnkl~~Pla~~ii~P~~~~~~~~~~~G~~p~~i-~~~~giae~~~v~~f~pd~evlkeLg 177 (346)
T COG1817 117 ------------------EAQNKLTLPLADVIITPEAIDEEELLDFGADPNKI-SGYNGIAELANVYGFVPDPEVLKELG 177 (346)
T ss_pred ------------------HHHhhcchhhhhheecccccchHHHHHhCCCccce-ecccceeEEeecccCCCCHHHHHHcC
Confidence 01135666889999998888888887775434444 3344432 11111111
Q ss_pred CCCCCCCcEEEE-E---e--ccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCC
Q 012436 263 LERSTEYPAIIS-V---A--QFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDG 336 (464)
Q Consensus 263 ~~~~~~~~~i~~-~---G--~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~ 336 (464)
.. .+..+|++ . | -....++.+.+.++++.+++. -.+++-.. ++.++..+++ .
T Consensus 178 l~--~~~~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l~k~--------giV~ipr~---------~~~~eife~~---~ 235 (346)
T COG1817 178 LE--EGETYIVMRPEPWGAHYDNGDRGISVLPDLIKELKKY--------GIVLIPRE---------KEQAEIFEGY---R 235 (346)
T ss_pred CC--CCCceEEEeeccccceeeccccchhhHHHHHHHHHhC--------cEEEecCc---------hhHHHHHhhh---c
Confidence 11 22233332 1 1 123456777777888877553 24454432 2333334332 1
Q ss_pred cEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCC--ccceecccCCccceeecC--CHHH
Q 012436 337 NVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGP--KMDIVLEEDGQQTGFLAQ--NAEE 412 (464)
Q Consensus 337 ~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~--~~~~v~~~~~~~~g~~~~--~~~~ 412 (464)
++...... -|-.+++-.|++++ .+.|...-||...|+|.|+..-|-. ..+.. -+.|.++. |+.+
T Consensus 236 n~i~pk~~--vD~l~Llyya~lvi-----g~ggTMarEaAlLGtpaIs~~pGkll~vdk~l-----ie~G~~~~s~~~~~ 303 (346)
T COG1817 236 NIIIPKKA--VDTLSLLYYATLVI-----GAGGTMAREAALLGTPAISCYPGKLLAVDKYL-----IEKGLLYHSTDEIA 303 (346)
T ss_pred cccCCccc--ccHHHHHhhhheee-----cCCchHHHHHHHhCCceEEecCCccccccHHH-----HhcCceeecCCHHH
Confidence 23222222 45556888888877 3446667999999999999874411 11222 24566554 7766
Q ss_pred HHHHHHHHHcCCH
Q 012436 413 YADAIVKIISMPE 425 (464)
Q Consensus 413 la~~i~~l~~~~~ 425 (464)
..+...+.+. ++
T Consensus 304 ~~~~a~~~l~-~~ 315 (346)
T COG1817 304 IVEYAVRNLK-YR 315 (346)
T ss_pred HHHHHHHHhh-ch
Confidence 6666666665 44
|
|
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
Probab=98.28 E-value=8.2e-06 Score=73.28 Aligned_cols=186 Identities=12% Similarity=0.015 Sum_probs=93.3
Q ss_pred eEEEecCCCCCC---CCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHh-----hcC------ccc-----
Q 012436 36 SVAFFHPNTNDG---GGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVD-----RFG------VEL----- 96 (464)
Q Consensus 36 kI~~~~~~~~~~---GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~-----~~~------~~~----- 96 (464)
||++++.-+.+. ||...++..|+++|++.| ++|.++++.+ ....+...+ .+. +.+
T Consensus 1 kIl~vt~E~~P~~k~GGLgdv~~~L~kaL~~~G--~~V~Vi~P~y----~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 74 (245)
T PF08323_consen 1 KILMVTSEYAPFAKVGGLGDVVGSLPKALAKQG--HDVRVIMPKY----GFIDEEYFQLEPVRRLSVPFGGPVPVGVWYE 74 (245)
T ss_dssp EEEEE-S-BTTTB-SSHHHHHHHHHHHHHHHTT---EEEEEEE-T----HHHHHHCTTEEEEEEES-STTCEEEEE----
T ss_pred CEEEEEcccCcccccCcHhHHHHHHHHHHHhcC--CeEEEEEccc----hhhhhhhhcceEEEEeccccccccccccceE
Confidence 788888766662 899999999999999999 6666666654 222221100 000 000
Q ss_pred -------CCCceeeeeeccccccc-ccCcc-----eehhhhchhhhHHHHHHhhh--cCCcEEEecccccccch-hhh-c
Q 012436 97 -------LHPPKVVHLYRRKWIEE-STYPR-----FTMIGQSFGSVYLSWEALCK--FTPLYYFDTSGYAFTYP-LAR-I 159 (464)
Q Consensus 97 -------~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~~~~~~l~~--~~~Dvv~~~~~~~~~~~-~~~-~ 159 (464)
..+++++.+....+... ..+.. .....++......+.+.++. .+|||||++..+....| +.+ .
T Consensus 75 ~~v~~~~~~~v~v~~i~~~~~f~r~~iY~~~~~~~~d~~~rf~~fs~a~le~~~~l~~~pDIIH~hDW~tal~p~~lk~~ 154 (245)
T PF08323_consen 75 VRVYRYPVDGVPVYFIDNPEYFDRPGIYGDNGGDYPDNAERFAFFSRAALELLKKLGWKPDIIHCHDWHTALAPLYLKER 154 (245)
T ss_dssp EEEEEEEETTEEEEEEESHHHHGSSSSSBSTSSBHTTHHHHHHHHHHHHHHHHCTCT-S-SEEEEECGGGTTHHHHHHHC
T ss_pred EEEEEEEcCCccEEEecChhhccccceeccCCCcchhHHHHHHHHHHHHHHHHHhhCCCCCEEEecCchHHHHHHHhccc
Confidence 12334454444333221 12211 11222222333444555555 58999999998888876 333 2
Q ss_pred c-------CceEEEEeeCCcchhhhhh----cccccccccCCCcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEc
Q 012436 160 F-------GCRVICYTHYPTISLDMIS----RVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVN 228 (464)
Q Consensus 160 ~-------~~p~v~~~h~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~ 228 (464)
. ++|+++++|+......... ..+=....+..... ..+.. .. .+.+..+..||.|+++
T Consensus 155 ~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~~~---~~~~~--------~i-n~lk~gi~~AD~v~TV 222 (245)
T PF08323_consen 155 YQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNLDE---YEFYG--------QI-NFLKAGIVYADKVTTV 222 (245)
T ss_dssp CSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-STTT---TEETT--------EE-EHHHHHHHHSSEEEES
T ss_pred cccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhccccc---ccccc--------cc-CHHHHHHHhcCEeeeC
Confidence 2 6999999995332111100 00000000000000 00000 01 1345677999999999
Q ss_pred CHHHHHHHHHH
Q 012436 229 SSWTQSHIEKL 239 (464)
Q Consensus 229 S~~~~~~~~~~ 239 (464)
|+..++++...
T Consensus 223 S~~Ya~Ei~~~ 233 (245)
T PF08323_consen 223 SPTYAREIQTP 233 (245)
T ss_dssp SHHHHHHTTSH
T ss_pred CHHHHHHHhCc
Confidence 99998887554
|
4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A .... |
| >PLN03007 UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Probab=98.27 E-value=0.002 Score=64.15 Aligned_cols=85 Identities=14% Similarity=0.015 Sum_probs=52.7
Q ss_pred CCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCc---cceecccCCccceee-----
Q 012436 335 DGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPK---MDIVLEEDGQQTGFL----- 406 (464)
Q Consensus 335 ~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~---~~~v~~~~~~~~g~~----- 406 (464)
+.++.+.+++|+.+ +|+.+++..+-+ +-| -++++||+++|+|+|+-...+-- ...+.+..+-+.|+-
T Consensus 344 ~~g~~v~~w~PQ~~---iL~h~~v~~fvt-H~G-~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~ 418 (482)
T PLN03007 344 GKGLIIRGWAPQVL---ILDHQATGGFVT-HCG-WNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLV 418 (482)
T ss_pred cCCEEEecCCCHHH---HhccCccceeee-cCc-chHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEecccccc
Confidence 45789999998865 577777633332 223 45899999999999997644320 111111000112220
Q ss_pred --c-C--CHHHHHHHHHHHHcCCH
Q 012436 407 --A-Q--NAEEYADAIVKIISMPE 425 (464)
Q Consensus 407 --~-~--~~~~la~~i~~l~~~~~ 425 (464)
. + +.+++++++++++. ++
T Consensus 419 ~~~~~~~~~~~l~~av~~~m~-~~ 441 (482)
T PLN03007 419 KVKGDFISREKVEKAVREVIV-GE 441 (482)
T ss_pred ccccCcccHHHHHHHHHHHhc-Cc
Confidence 1 2 88999999999998 75
|
|
| >COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.26 E-value=3.6e-05 Score=67.43 Aligned_cols=141 Identities=18% Similarity=0.242 Sum_probs=81.3
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHH
Q 012436 270 PAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDL 349 (464)
Q Consensus 270 ~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~ 349 (464)
-+++..|.-++. + ..++.+..+.+. ++.+.++-+..+. ....+++.++. .+++.++-.. +++
T Consensus 160 ~ilI~lGGsDpk-~--lt~kvl~~L~~~------~~nl~iV~gs~~p----~l~~l~k~~~~---~~~i~~~~~~--~dm 221 (318)
T COG3980 160 DILITLGGSDPK-N--LTLKVLAELEQK------NVNLHIVVGSSNP----TLKNLRKRAEK---YPNINLYIDT--NDM 221 (318)
T ss_pred eEEEEccCCChh-h--hHHHHHHHhhcc------CeeEEEEecCCCc----chhHHHHHHhh---CCCeeeEecc--hhH
Confidence 356677764443 3 345666666554 4455554432221 23566666655 4688887776 899
Q ss_pred HHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEe----CCCCCccceecccCCccceeecCCHHHHHHHHHHHHcCCH
Q 012436 350 VKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAH----NSAGPKMDIVLEEDGQQTGFLAQNAEEYADAIVKIISMPE 425 (464)
Q Consensus 350 ~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~----~~~~~~~~~v~~~~~~~~g~~~~~~~~la~~i~~l~~~~~ 425 (464)
.++|.+||+.|.. -|.++.|+...|+|.++- +......++-.--.....|+. .........+.++.+ |+
T Consensus 222 a~LMke~d~aI~A-----aGstlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~lg~~~~l~~~-l~~~~~~~~~~~i~~-d~ 294 (318)
T COG3980 222 AELMKEADLAISA-----AGSTLYEALLLGVPSLVLPLAENQIATAKEFEALGIIKQLGYH-LKDLAKDYEILQIQK-DY 294 (318)
T ss_pred HHHHHhcchheec-----cchHHHHHHHhcCCceEEeeeccHHHHHHHHHhcCchhhccCC-CchHHHHHHHHHhhh-CH
Confidence 9999999998854 388999999999994332 211111111000000122322 244556666777777 88
Q ss_pred HHHHHHHHHH
Q 012436 426 TERLEMAAAA 435 (464)
Q Consensus 426 ~~~~~~~~~~ 435 (464)
..++.+....
T Consensus 295 ~~rk~l~~~~ 304 (318)
T COG3980 295 ARRKNLSFGS 304 (318)
T ss_pred HHhhhhhhcc
Confidence 7776665443
|
|
| >PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.0002 Score=59.50 Aligned_cols=103 Identities=16% Similarity=0.183 Sum_probs=68.0
Q ss_pred hcCCcEEEecccccccchhhh-ccCceEEEEeeC---CcchhhhhhcccccccccCCCcccccchhhhHHHHHHHHHHHH
Q 012436 138 KFTPLYYFDTSGYAFTYPLAR-IFGCRVICYTHY---PTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSW 213 (464)
Q Consensus 138 ~~~~Dvv~~~~~~~~~~~~~~-~~~~p~v~~~h~---p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (464)
.+.||+|+.|+++...+.+.. .+++|++.|+-+ +. ..|. .|..+. ...... ....+..+.
T Consensus 64 Gf~PDvI~~H~GWGe~Lflkdv~P~a~li~Y~E~~y~~~-g~d~---------~FDpe~---p~~~~~---~~~~r~rN~ 127 (171)
T PF12000_consen 64 GFVPDVIIAHPGWGETLFLKDVFPDAPLIGYFEFYYRAS-GADV---------GFDPEF---PPSLDD---RARLRMRNA 127 (171)
T ss_pred CCCCCEEEEcCCcchhhhHHHhCCCCcEEEEEEEEecCC-CCcC---------CCCCCC---CCCHHH---HHHHHHHhH
Confidence 357899999999998876655 779999988762 11 0010 010010 001111 112222333
Q ss_pred HHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCC
Q 012436 214 MYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGL 258 (464)
Q Consensus 214 ~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~ 258 (464)
.....+..||..+++|.+.++.+-..+ .+|+.||+.|+|++.+
T Consensus 128 ~~l~~l~~~D~~isPT~wQ~~~fP~~~--r~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 128 HNLLALEQADAGISPTRWQRSQFPAEF--RSKISVIHDGIDTDRF 170 (171)
T ss_pred HHHHHHHhCCcCcCCCHHHHHhCCHHH--HcCcEEeecccchhhc
Confidence 345567889999999999999998877 7899999999998754
|
This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important. |
| >cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS) | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.0016 Score=60.05 Aligned_cols=99 Identities=16% Similarity=0.153 Sum_probs=63.7
Q ss_pred EEEEEeccCCCC--ChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhH
Q 012436 271 AIISVAQFRPEK--AHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRD 348 (464)
Q Consensus 271 ~i~~~G~~~~~K--~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~ 348 (464)
.++..|.-.+.| ..+.+.+.++.+.++ ++++++.|+..+. +..++..+..+....+.+.|..+-.|
T Consensus 124 i~i~~~~~~~~k~w~~~~~~~l~~~l~~~------~~~ivl~g~~~e~------~~~~~i~~~~~~~~~~~~~~~~~l~e 191 (279)
T cd03789 124 VVLPPGASGPAKRWPAERFAALADRLLAR------GARVVLTGGPAER------ELAEEIAAALGGPRVVNLAGKTSLRE 191 (279)
T ss_pred EEECCCCCCccccCCHHHHHHHHHHHHHC------CCEEEEEechhhH------HHHHHHHHhcCCCccccCcCCCCHHH
Confidence 444455444444 346777777777654 6788999865422 23333333332233456778888899
Q ss_pred HHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeC
Q 012436 349 LVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHN 386 (464)
Q Consensus 349 ~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~ 386 (464)
+..+++.||++|.+ ++ | .+--|.+.|+|+|+--
T Consensus 192 ~~~li~~~~l~I~~---Ds-g-~~HlA~a~~~p~i~l~ 224 (279)
T cd03789 192 LAALLARADLVVTN---DS-G-PMHLAAALGTPTVALF 224 (279)
T ss_pred HHHHHHhCCEEEee---CC-H-HHHHHHHcCCCEEEEE
Confidence 99999999999976 32 2 3444579999999854
|
Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.75 E-value=1.5e-06 Score=73.44 Aligned_cols=89 Identities=24% Similarity=0.295 Sum_probs=59.7
Q ss_pred CcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCc---cc----eecccCCccceeecC
Q 012436 336 GNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPK---MD----IVLEEDGQQTGFLAQ 408 (464)
Q Consensus 336 ~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~---~~----~v~~~~~~~~g~~~~ 408 (464)
.+|.+.++. +++.++|+.||+.|.- +.+.++.|++++|+|.|.-...+.. .+ .+.. ...+....
T Consensus 55 ~~v~~~~~~--~~m~~~m~~aDlvIs~----aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~---~g~~~~~~ 125 (167)
T PF04101_consen 55 PNVKVFGFV--DNMAELMAAADLVISH----AGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAK---KGAAIMLD 125 (167)
T ss_dssp CCCEEECSS--SSHHHHHHHHSEEEEC----S-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHH---CCCCCCSE
T ss_pred CcEEEEech--hhHHHHHHHcCEEEeC----CCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHH---cCCccccC
Confidence 589999998 7899999999988853 4467999999999999987665521 10 1112 23333332
Q ss_pred ----CHHHHHHHHHHHHcCCHHHHHHHHHH
Q 012436 409 ----NAEEYADAIVKIISMPETERLEMAAA 434 (464)
Q Consensus 409 ----~~~~la~~i~~l~~~~~~~~~~~~~~ 434 (464)
+++++.++|.++++ ++.....+.++
T Consensus 126 ~~~~~~~~L~~~i~~l~~-~~~~~~~~~~~ 154 (167)
T PF04101_consen 126 ESELNPEELAEAIEELLS-DPEKLKEMAKA 154 (167)
T ss_dssp CCC-SCCCHHHHHHCHCC-CHH-SHHHCCC
T ss_pred cccCCHHHHHHHHHHHHc-CcHHHHHHHHH
Confidence 57889999999998 88766655544
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B. |
| >COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.003 Score=59.75 Aligned_cols=268 Identities=13% Similarity=0.034 Sum_probs=137.5
Q ss_pred cceEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeeccccccc
Q 012436 34 TTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEE 113 (464)
Q Consensus 34 ~mkI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (464)
+|||+++.++. - |=-....-+...|++..++.++.+++.... ..+..... .++ .++....+++.
T Consensus 1 ~~kIliir~~~--i-GD~vlt~p~~~~lk~~~P~a~i~~~~~~~~---~~i~~~~p---~I~-----~vi~~~~~~~~-- 64 (334)
T COG0859 1 MMKILVIRLSK--L-GDVVLTLPLLRTLKKAYPNAKIDVLVPKGF---APILKLNP---EID-----KVIIIDKKKKG-- 64 (334)
T ss_pred CceEEEEeccc--h-hHHHhHHHHHHHHHHHCCCCEEEEEeccch---HHHHhcCh---Hhh-----hhccccccccc--
Confidence 48999998763 2 566677788899999999999988886531 22222111 010 11111111111
Q ss_pred ccCcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccchhhhccCceEEEEeeCCcchhhhhhcccccccccCCCcc
Q 012436 114 STYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNAS 193 (464)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~ 193 (464)
..+.....+.+.+++.++|++++..+..-...+....++|...-..+..
T Consensus 65 ----------~~~~~~~~l~~~lr~~~yD~vidl~~~~ksa~l~~~~~~~~r~g~~~~~--------------------- 113 (334)
T COG0859 65 ----------LGLKERLALLRTLRKERYDAVIDLQGLLKSALLALLLGIPFRIGFDKKS--------------------- 113 (334)
T ss_pred ----------cchHHHHHHHHHhhccCCCEEEECcccHHHHHHHHHhCCCccccccccc---------------------
Confidence 1134456677778899999999766644333344455666544322100
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEe-cCCCCCCCCccC---CCCCCC--
Q 012436 194 IAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRV-YPPCDTSGLQVL---PLERST-- 267 (464)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i-~~~~d~~~~~~~---~~~~~~-- 267 (464)
.... +......+ .-....+...+.+...... ...... ....+....... ......
T Consensus 114 ---------~r~~-------~~~~~~~~--~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (334)
T COG0859 114 ---------AREL-------LLNKFYPR--LDKPEGQHVVERYLALLED-LGLYPPPEPQLDFPLPRPPIELAKNLAKFD 174 (334)
T ss_pred ---------chhH-------HHHHhhhc--cCcccchhHHHHHHHHHHH-hcCCCCCCCccCcccccCHHHHHHHHHhcC
Confidence 0000 00111111 1111122333333322211 000000 011011100000 000011
Q ss_pred CCcEEEEEe-ccCCCCCh--HHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCC
Q 012436 268 EYPAIISVA-QFRPEKAH--PLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNL 344 (464)
Q Consensus 268 ~~~~i~~~G-~~~~~K~~--~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~ 344 (464)
.+.+++..| +....|.. +...+.++.+.++ ..++++.|+.. +. +..+++.+.++ ..+.+.|..
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~------~~~Vvl~g~~~---e~---e~~~~i~~~~~--~~~~l~~k~ 240 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAK------GYQVVLFGGPD---EE---ERAEEIAKGLP--NAVILAGKT 240 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHC------CCEEEEecChH---HH---HHHHHHHHhcC--CccccCCCC
Confidence 245566666 44466654 4566666666554 57889999762 21 34444444432 223388999
Q ss_pred ChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeC
Q 012436 345 LYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHN 386 (464)
Q Consensus 345 ~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~ 386 (464)
+-.|+..+++.||++|.+ ++. .+-=|.|.|+|+|+--
T Consensus 241 sL~e~~~li~~a~l~I~~---DSg--~~HlAaA~~~P~I~iy 277 (334)
T COG0859 241 SLEELAALIAGADLVIGN---DSG--PMHLAAALGTPTIALY 277 (334)
T ss_pred CHHHHHHHHhcCCEEEcc---CCh--HHHHHHHcCCCEEEEE
Confidence 999999999999999966 222 3445889999999854
|
|
| >TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.031 Score=52.58 Aligned_cols=134 Identities=13% Similarity=0.018 Sum_probs=77.7
Q ss_pred CCcEEEEEeccCCCCCh--HHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCC
Q 012436 268 EYPAIISVAQFRPEKAH--PLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLL 345 (464)
Q Consensus 268 ~~~~i~~~G~~~~~K~~--~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~ 345 (464)
++.+++..|.-.+.|.. +...+.++.+.++ +.++++.|+++.+ .+..++..+.. + +..+.|..+
T Consensus 179 ~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~------~~~~vl~~g~~~e-----~~~~~~i~~~~--~-~~~l~g~~s 244 (319)
T TIGR02193 179 APYAVLLHATSRDDKTWPEERWRELARLLLAR------GLQIVLPWGNDAE-----KQRAERIAEAL--P-GAVVLPKMS 244 (319)
T ss_pred CCEEEEEeCCCcccCCCCHHHHHHHHHHHHHC------CCeEEEeCCCHHH-----HHHHHHHHhhC--C-CCeecCCCC
Confidence 44566777765566654 5667777776542 5778887554321 12233333332 2 346678888
Q ss_pred hhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCcccee----ecC-CHHHHHHHHHHH
Q 012436 346 YRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGF----LAQ-NAEEYADAIVKI 420 (464)
Q Consensus 346 ~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~----~~~-~~~~la~~i~~l 420 (464)
-.|+..+++.||++|.+ ++. .+-=|.|.|+|+|+--.+..... ..+.......+ +.. +++++.+++.++
T Consensus 245 L~el~ali~~a~l~I~~---DSg--p~HlAaa~g~P~i~lfg~t~p~~-~~P~~~~~~~~~~~~~~~I~~~~V~~ai~~~ 318 (319)
T TIGR02193 245 LAEVAALLAGADAVVGV---DTG--LTHLAAALDKPTVTLYGATDPGR-TGGYGKPNVALLGESGANPTPDEVLAALEEL 318 (319)
T ss_pred HHHHHHHHHcCCEEEeC---CCh--HHHHHHHcCCCEEEEECCCCHhh-cccCCCCceEEccCccCCCCHHHHHHHHHhh
Confidence 89999999999999966 332 34447788999998532222111 11100011111 112 788888888765
Q ss_pred H
Q 012436 421 I 421 (464)
Q Consensus 421 ~ 421 (464)
+
T Consensus 319 ~ 319 (319)
T TIGR02193 319 L 319 (319)
T ss_pred C
Confidence 3
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.011 Score=60.63 Aligned_cols=205 Identities=15% Similarity=0.123 Sum_probs=132.0
Q ss_pred CCeEEecCCCCCCCCccCCCCC------------CCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEc
Q 012436 244 DRIKRVYPPCDTSGLQVLPLER------------STEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVG 311 (464)
Q Consensus 244 ~~i~~i~~~~d~~~~~~~~~~~------------~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G 311 (464)
..+..+|-|+|...+....... ..++..++-+-++...||...=+.++.++..++....+.+.++.+.
T Consensus 239 ~~v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~ 318 (732)
T KOG1050|consen 239 VSVKALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIE 318 (732)
T ss_pred eeeeecccccchHHhhccccchhHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEe
Confidence 3445567777776655322111 1366788888899999999888899999888876555567777777
Q ss_pred CCCCCccHH---HHHHHHHHHH----hcCC---CCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhC--
Q 012436 312 SCRNKSDEE---RLQSLKDKSI----ELKV---DGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAG-- 379 (464)
Q Consensus 312 ~~~~~~~~~---~~~~l~~~~~----~~~l---~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G-- 379 (464)
.+...+..+ ....+....+ +++- .+-+.+...++..++.+++..+|+.+..++.+|..++.+|+..|.
T Consensus 319 ~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~ 398 (732)
T KOG1050|consen 319 NPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQEN 398 (732)
T ss_pred cCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhcc
Confidence 655443332 1222222222 1221 123446678899999999999999999999999999999999883
Q ss_pred --CcEEEeCCCCCccceecccCCccceeecC-CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHH
Q 012436 380 --AIPIAHNSAGPKMDIVLEEDGQQTGFLAQ-NAEEYADAIVKIISMPETERLEMAAAARRRAARFSEQRFYEDFKA 453 (464)
Q Consensus 380 --~PvI~~~~~~~~~~~v~~~~~~~~g~~~~-~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 453 (464)
.+.|.+...|. .+..++ ..-.+.+ +.++++.+|..+++|..++++..-......+...+....+..+.+
T Consensus 399 ~~~~lVlsef~G~-~~tl~d----~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~~~W~~~~~~ 470 (732)
T KOG1050|consen 399 KKSVLVLSEFIGD-DTTLED----AAIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDVVYWAKSFLQ 470 (732)
T ss_pred cCCceEEeeeccc-cccccc----cCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhHHHHHHHHHH
Confidence 56777766555 333322 1222334 899999999999995555554444444444334444444444444
|
|
| >COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.015 Score=50.78 Aligned_cols=152 Identities=12% Similarity=0.002 Sum_probs=82.5
Q ss_pred hcCCEEEEcCHHHHHHHHHHhCCCCCeEEe---cCCCCCCCCcc----C-CCCCCCCCcEEEEEeccCCCCCh--HH---
Q 012436 220 SCADLAMVNSSWTQSHIEKLWGIPDRIKRV---YPPCDTSGLQV----L-PLERSTEYPAIISVAQFRPEKAH--PL--- 286 (464)
Q Consensus 220 ~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i---~~~~d~~~~~~----~-~~~~~~~~~~i~~~G~~~~~K~~--~~--- 286 (464)
+..|.||++-....+..... ..++..+ ++.+....... . .......+++-+++|.-.+.-.+ +.
T Consensus 108 ~~fDlvivp~HD~~~~~s~~---~~Nilpi~Gs~h~Vt~~~lAa~~e~~~~~~p~~rq~vAVlVGg~nk~f~~~~d~a~q 184 (329)
T COG3660 108 NHFDLVIVPYHDWREELSDQ---GPNILPINGSPHNVTSQRLAALREAFKHLLPLPRQRVAVLVGGNNKAFVFQEDKAHQ 184 (329)
T ss_pred ccceEEeccchhhhhhhhcc---CCceeeccCCCCcccHHHhhhhHHHHHhhCCCCCceEEEEecCCCCCCccCHHHHHH
Confidence 55688888766666553222 2333222 23332222110 0 11123556788999976655443 22
Q ss_pred HHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHh-cCCCCcEEEccCC-ChhHHHHHHhcCcEEEEcCC
Q 012436 287 QLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIE-LKVDGNVEFYKNL-LYRDLVKLLGGAVVGIHSMI 364 (464)
Q Consensus 287 ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~-~~l~~~v~~~g~~-~~~~~~~~l~~ad~~v~ps~ 364 (464)
+..++.+..++ ....+++--+.... +.++...+. +.-..-+.+-+.- ...-...+|+.||.+|.+..
T Consensus 185 ~~~~l~k~l~~-----~g~~~lisfSRRTp------~~~~s~l~~~l~s~~~i~w~~~d~g~NPY~~~La~Adyii~TaD 253 (329)
T COG3660 185 FASLLVKILEN-----QGGSFLISFSRRTP------DTVKSILKNNLNSSPGIVWNNEDTGYNPYIDMLAAADYIISTAD 253 (329)
T ss_pred HHHHHHHHHHh-----CCceEEEEeecCCc------HHHHHHHHhccccCceeEeCCCCCCCCchHHHHhhcceEEEecc
Confidence 33333333332 25667766655433 556666654 4333445554431 33457788999999997732
Q ss_pred CCCCChHHHHHHHhCCcEEEeCCC
Q 012436 365 DEHFGISVVEYMAAGAIPIAHNSA 388 (464)
Q Consensus 365 ~e~~~~~~~Ea~a~G~PvI~~~~~ 388 (464)
.-....||.+.|+||-+....
T Consensus 254 ---SinM~sEAasTgkPv~~~~~~ 274 (329)
T COG3660 254 ---SINMCSEAASTGKPVFILEPP 274 (329)
T ss_pred ---hhhhhHHHhccCCCeEEEecC
Confidence 223468999999999886543
|
|
| >PLN02210 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.094 Score=51.77 Aligned_cols=82 Identities=15% Similarity=0.111 Sum_probs=51.6
Q ss_pred CcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCcc---ceecccCCccceeec-----
Q 012436 336 GNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKM---DIVLEEDGQQTGFLA----- 407 (464)
Q Consensus 336 ~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~---~~v~~~~~~~~g~~~----- 407 (464)
++..+.+++|+.+ +|+.+.+..+- ++-|+ ++++||+.+|+|+|+-...+--. ..+.+. -+.|...
T Consensus 324 ~~g~v~~w~PQ~~---iL~h~~vg~Fi-tH~G~-nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~--~g~G~~l~~~~~ 396 (456)
T PLN02210 324 GQGVVLEWSPQEK---ILSHMAISCFV-THCGW-NSTIETVVAGVPVVAYPSWTDQPIDARLLVDV--FGIGVRMRNDAV 396 (456)
T ss_pred CCeEEEecCCHHH---HhcCcCcCeEE-eeCCc-ccHHHHHHcCCCEEecccccccHHHHHHHHHH--hCeEEEEecccc
Confidence 3445679998876 57777633322 22333 48999999999999976543211 111110 2455433
Q ss_pred --C-CHHHHHHHHHHHHcCCH
Q 012436 408 --Q-NAEEYADAIVKIISMPE 425 (464)
Q Consensus 408 --~-~~~~la~~i~~l~~~~~ 425 (464)
. +.+++++++++++. ++
T Consensus 397 ~~~~~~~~l~~av~~~m~-~~ 416 (456)
T PLN02210 397 DGELKVEEVERCIEAVTE-GP 416 (456)
T ss_pred CCcCCHHHHHHHHHHHhc-Cc
Confidence 1 78899999999997 64
|
|
| >PRK10422 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.022 Score=54.42 Aligned_cols=103 Identities=9% Similarity=-0.037 Sum_probs=66.0
Q ss_pred CcEEEEEeccCCCCC--hHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCh
Q 012436 269 YPAIISVAQFRPEKA--HPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLY 346 (464)
Q Consensus 269 ~~~i~~~G~~~~~K~--~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~ 346 (464)
+.+++..|.-.+.|. .+...+.++.+.+. +.+++++|+..+. +. +..++..+.......+.+.|..+-
T Consensus 184 ~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~------~~~vvl~ggp~e~-e~---~~~~~i~~~~~~~~~~~l~g~~sL 253 (352)
T PRK10422 184 NYVVIQPTARQIFKCWDNDKFSAVIDALQAR------GYEVVLTSGPDKD-DL---ACVNEIAQGCQTPPVTALAGKTTF 253 (352)
T ss_pred CeEEEecCCCccccCCCHHHHHHHHHHHHHC------CCeEEEEcCCChH-HH---HHHHHHHHhcCCCccccccCCCCH
Confidence 456667776555564 45666666766542 6788888764322 11 122333332222334667898888
Q ss_pred hHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeC
Q 012436 347 RDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHN 386 (464)
Q Consensus 347 ~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~ 386 (464)
.|+..+++.||++|.. ++. .+-=|.|.|+|+|+--
T Consensus 254 ~el~ali~~a~l~v~n---DSG--p~HlAaA~g~P~v~lf 288 (352)
T PRK10422 254 PELGALIDHAQLFIGV---DSA--PAHIAAAVNTPLICLF 288 (352)
T ss_pred HHHHHHHHhCCEEEec---CCH--HHHHHHHcCCCEEEEE
Confidence 9999999999999965 332 3445778999999853
|
|
| >TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.073 Score=49.51 Aligned_cols=155 Identities=17% Similarity=0.112 Sum_probs=88.0
Q ss_pred HHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCCCCCCCCCcEEEEEeccC---CCCChHHHHH
Q 012436 213 WMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFR---PEKAHPLQLE 289 (464)
Q Consensus 213 ~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~~~~~~~~~~i~~~G~~~---~~K~~~~ll~ 289 (464)
++.+.+++.+|.+.+=.+...+.+++. |. ++.+.+.++-.-.....+.....++..+++.-+-. ..+..+.+.+
T Consensus 119 ~~~~~~l~~~~~i~vRD~~S~~~l~~~-g~--~i~~~~D~a~~l~~~~~~~~~~~~~~~i~i~~r~~~~~~~~~~~~l~~ 195 (298)
T TIGR03609 119 WLVRRVLRGCRAISVRDAASYRLLKRL-GI--PAELAADPVWLLPPEPWPGGEPLPEPVIVVSLRPWPLLDVSRLLRLLR 195 (298)
T ss_pred HHHHHHHccCCEEEEeCHHHHHHHHHh-CC--CceEeCChhhhCCCCcccccccCCCCeEEEEECCCCcCCHHHHHHHHH
Confidence 345677899999999888888888765 43 45555533211000000111112234454443321 1123556777
Q ss_pred HHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCC
Q 012436 290 AFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFG 369 (464)
Q Consensus 290 a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~ 369 (464)
++..+.++. +.+++++..... +|.+..+++.+.. .-+..+ ....+.+|+.+++++||++|....+
T Consensus 196 ~l~~l~~~~-----g~~v~~i~~~~~-~D~~~~~~l~~~~---~~~~~i--~~~~~~~e~~~~i~~~~~vI~~RlH---- 260 (298)
T TIGR03609 196 ALDRLQRDT-----GAFVLFLPFQQP-QDLPLARALRDQL---LGPAEV--LSPLDPEELLGLFASARLVIGMRLH---- 260 (298)
T ss_pred HHHHHHHhh-----CCeEEEEeCCcc-hhHHHHHHHHHhc---CCCcEE--EecCCHHHHHHHHhhCCEEEEechH----
Confidence 777776654 566666554322 2333334444333 222333 3555778999999999988855322
Q ss_pred hHHHHHHHhCCcEEEeC
Q 012436 370 ISVVEYMAAGAIPIAHN 386 (464)
Q Consensus 370 ~~~~Ea~a~G~PvI~~~ 386 (464)
..+=|+.+|+|+|+-.
T Consensus 261 -~~I~A~~~gvP~i~i~ 276 (298)
T TIGR03609 261 -ALILAAAAGVPFVALS 276 (298)
T ss_pred -HHHHHHHcCCCEEEee
Confidence 4677999999999864
|
The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395). |
| >COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.088 Score=49.58 Aligned_cols=322 Identities=13% Similarity=0.085 Sum_probs=155.7
Q ss_pred ceEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeecccccccc
Q 012436 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (464)
Q Consensus 35 mkI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (464)
||++++..+.....|-|-.+..+...|.+...+.++.+.+..+ +...+ +++.-.........
T Consensus 1 m~~~L~g~~g~gN~Gdeail~all~~l~~~~~~~~~~~~~~~p----~~i~~--------------p~~~~~~p~~~~~~ 62 (385)
T COG2327 1 MKALLLGYYGFGNIGDEAILKALLDMLRRLNPDAKVLVMGRRP----PVIVD--------------PVFLSANPEGSAAG 62 (385)
T ss_pred CeeEEEeeecCCCcccHHHHHHHHHHHHhhCcccceeeeecCC----ccccc--------------ceeecCCcccCchh
Confidence 5666665544444689999999999999999999988887653 11111 11100000000000
Q ss_pred cCcceehhhhchhhhHH---HHHHhhh-cCCcEEEeccc--------cccc------chhhhccCceEEEEeeCCcchhh
Q 012436 115 TYPRFTMIGQSFGSVYL---SWEALCK-FTPLYYFDTSG--------YAFT------YPLARIFGCRVICYTHYPTISLD 176 (464)
Q Consensus 115 ~~~~~~~~~~~~~~~~~---~~~~l~~-~~~Dvv~~~~~--------~~~~------~~~~~~~~~p~v~~~h~p~~~~~ 176 (464)
.+++ ..+..+...+ ....+.. .+.|+++...+ .... +.++++.++|++++-|+-.
T Consensus 63 l~g~---~k~v~R~~~k~~~~~~il~~l~~~d~~I~~Gg~l~~d~~~~~~~~~~~~~~~la~l~~kp~~~~g~svG---- 135 (385)
T COG2327 63 LNGR---VKSVLRRRLKHPGLVSILSALGKADLIIIGGGGLLQDVTSSRSIIYYGGSILLARLAGKPTFFFGQSVG---- 135 (385)
T ss_pred hhHH---HHHHHHHhhccccHHHHHHHhhhCCEEEEcCcccccCccccceehhhHHHHHHHHHcCCCEEEEeccCC----
Confidence 0110 0111111111 0111222 26787763211 1111 1256688999999888311
Q ss_pred hhhcccccccccCCCcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEec-CCCCC
Q 012436 177 MISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVY-PPCDT 255 (464)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~-~~~d~ 255 (464)
+. ..+..+++....++.+..+++=.+...++++.. |.+... .. +....
T Consensus 136 ---------------------P~-------~~~~s~~~~~~~~~~~s~i~vRD~~S~~llk~~-gi~a~l--~~D~Af~L 184 (385)
T COG2327 136 ---------------------PL-------KHPLSRQLLNYVLGGCSAISVRDPVSYELLKQL-GINARL--VTDPAFLL 184 (385)
T ss_pred ---------------------Cc-------cCHHHHHHHHHHhcCCcEEEEecHHhHHHHHHc-CCCeEe--ecCcceec
Confidence 00 112233455667789999999899999999854 442222 22 11111
Q ss_pred CCCcc-CCC--CCCCCCcEEEEEeccCCCCChHH-----HHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHH
Q 012436 256 SGLQV-LPL--ERSTEYPAIISVAQFRPEKAHPL-----QLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKD 327 (464)
Q Consensus 256 ~~~~~-~~~--~~~~~~~~i~~~G~~~~~K~~~~-----ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~ 327 (464)
+...+ ... .....+...+..-.+.+.+..+. +-+++..+..... ..+++...-.+. .++....+.
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~i~lr~~~~~~t~~~~~~~~v~~~l~~~~~~~~---~~~~i~~~~~~~-s~d~~va~~--- 257 (385)
T COG2327 185 PASSQNATASDVEAREKTVAITLRGLHPDNTAQRSILKYVNEALDLVERQVK---ALWRITLIDYGA-SDDLAVADA--- 257 (385)
T ss_pred ccccccccccccccccceEEEEecccCCchhhhHHHHHHHHHHHHHHHHhhh---cceEEEeeeccc-cchhHHHHH---
Confidence 11010 011 11122233333333333322221 2233333211111 123332222221 223233333
Q ss_pred HHHhcCCCCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeec
Q 012436 328 KSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLA 407 (464)
Q Consensus 328 ~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~ 407 (464)
.+....-.+++.+..-...+++...++++|+.|-.-. -+++=|++.|+|+|+-....-...+.++. +.-++..
T Consensus 258 ia~~~~~~~~i~~~~d~~~~~~~~~l~~~dl~Vg~R~-----HsaI~al~~g~p~i~i~Y~~K~~~l~~~~--gl~~~~~ 330 (385)
T COG2327 258 IAQLVLDSAEILVSSDEYAEELGGILAACDLIVGMRL-----HSAIMALAFGVPAIAIAYDPKVRGLMQDL--GLPGFAI 330 (385)
T ss_pred HHhhcCCccceEeecchHHHHHHHHhccCceEEeehh-----HHHHHHHhcCCCeEEEeecHHHHHHHHHc--CCCcccc
Confidence 3333332356766544335777889999999884421 24677999999999976543322333221 2233333
Q ss_pred C----CHHHHHHHHHHHHcCCHH
Q 012436 408 Q----NAEEYADAIVKIISMPET 426 (464)
Q Consensus 408 ~----~~~~la~~i~~l~~~~~~ 426 (464)
+ +.+.+.....+.+...++
T Consensus 331 ~i~~~~~~~l~~~~~e~~~~~~~ 353 (385)
T COG2327 331 DIDPLDAEILSAVVLERLTKLDE 353 (385)
T ss_pred cCCCCchHHHHHHHHHHHhccHH
Confidence 2 788888888887772333
|
|
| >PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.084 Score=49.75 Aligned_cols=97 Identities=16% Similarity=0.062 Sum_probs=60.9
Q ss_pred cEEEEEeccCCCCC--hHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChh
Q 012436 270 PAIISVAQFRPEKA--HPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYR 347 (464)
Q Consensus 270 ~~i~~~G~~~~~K~--~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~ 347 (464)
..++..|.-...|. .+...+.++.+.++ +.++++.|+++++ . +..++..+. .+++.+.|..+-.
T Consensus 180 ~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~------~~~ivl~~G~~~e--~---~~~~~i~~~---~~~~~l~g~~sL~ 245 (322)
T PRK10964 180 YLVFLHATTRDDKHWPEAHWRELIGLLAPS------GLRIKLPWGAEHE--E---QRAKRLAEG---FPYVEVLPKLSLE 245 (322)
T ss_pred eEEEEeCCCcccccCCHHHHHHHHHHHHHC------CCeEEEeCCCHHH--H---HHHHHHHcc---CCcceecCCCCHH
Confidence 34344454344454 45667777776542 5677776434321 1 222333222 2357788988999
Q ss_pred HHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEe
Q 012436 348 DLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAH 385 (464)
Q Consensus 348 ~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~ 385 (464)
|+..+++.||++|.. ++ ..+-=|.|+|+|+|+-
T Consensus 246 elaali~~a~l~I~n---DS--Gp~HlA~A~g~p~val 278 (322)
T PRK10964 246 QVARVLAGAKAVVSV---DT--GLSHLTAALDRPNITL 278 (322)
T ss_pred HHHHHHHhCCEEEec---CC--cHHHHHHHhCCCEEEE
Confidence 999999999999966 32 2445588999999985
|
|
| >COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0068 Score=61.56 Aligned_cols=140 Identities=18% Similarity=0.132 Sum_probs=101.2
Q ss_pred CCCcEEEEEeccCCCCChHHHHHHHHHHHHHhc-CCCCCcEEEEEcCCCCC--ccHHHHHHHHHHHHhcCCCCcEEEccC
Q 012436 267 TEYPAIISVAQFRPEKAHPLQLEAFSVALRKLD-ADLPRPRLQFVGSCRNK--SDEERLQSLKDKSIELKVDGNVEFYKN 343 (464)
Q Consensus 267 ~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~-~~~p~~~l~i~G~~~~~--~~~~~~~~l~~~~~~~~l~~~v~~~g~ 343 (464)
++..+++++-|+..+|.....+.-...+..... +.-|.+.+++.|..... ........+...++..+...+|.|+..
T Consensus 485 p~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y~~aK~iIk~I~~~a~~in~~lkVvFl~n 564 (750)
T COG0058 485 PNALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPADYAAKEIIKLINDVADVINNKLKVVFLPN 564 (750)
T ss_pred CCcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcchHHHHHHHHHHHHHHhhcccceEEEeCC
Confidence 356789999999999988776666665555443 23356777777864322 122334445555555444457999998
Q ss_pred CChhHHHHHHhcCcEEEEcC--CCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC
Q 012436 344 LLYRDLVKLLGGAVVGIHSM--IDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ 408 (464)
Q Consensus 344 ~~~~~~~~~l~~ad~~v~ps--~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~ 408 (464)
.+-.-...++.+||+-...| ..|..|++-+-++..|.+.|+|--|.. -|+.+. .++.|||++.
T Consensus 565 YdvslA~~iipa~Dvweqis~a~~EASGTsnMK~alNGaltigtlDGan-vEi~e~-vg~~N~~~fG 629 (750)
T COG0058 565 YDVSLAELLIPAADVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGAN-VEIYEH-VGGENGWIFG 629 (750)
T ss_pred CChhHHHhhcccccccccCCCCCccccCcCcchHHhcCCceeeccccHH-HHHHHh-cCCCceEEeC
Confidence 87777888899999988776 489999999999999999999987766 577651 2279999997
|
|
| >TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.03 Score=53.34 Aligned_cols=101 Identities=10% Similarity=0.003 Sum_probs=63.3
Q ss_pred cEEEEEeccCCCCC--hHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChh
Q 012436 270 PAIISVAQFRPEKA--HPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYR 347 (464)
Q Consensus 270 ~~i~~~G~~~~~K~--~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~ 347 (464)
.+++..|.-.+.|. .+...+.++.+..+ +..++++|+..+. +.+..+++ .+..+-+..+.+.|..+-.
T Consensus 183 ~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~------~~~ivl~g~p~~~-e~~~~~~i---~~~~~~~~~~~l~g~~sL~ 252 (344)
T TIGR02201 183 YIVIQPTSRWFFKCWDNDRFSALIDALHAR------GYEVVLTSGPDKD-ELAMVNEI---AQGCQTPRVTSLAGKLTLP 252 (344)
T ss_pred EEEEeCCCCccccCCCHHHHHHHHHHHHhC------CCeEEEecCCCHH-HHHHHHHH---HhhCCCCcccccCCCCCHH
Confidence 45556665445453 45666666666542 6788999864321 11122233 2222222235678988889
Q ss_pred HHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEe
Q 012436 348 DLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAH 385 (464)
Q Consensus 348 ~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~ 385 (464)
|+..+++.||++|.. ++ ..+-=|.|.|+|+|+-
T Consensus 253 el~ali~~a~l~Vs~---DS--Gp~HlAaA~g~p~v~L 285 (344)
T TIGR02201 253 QLAALIDHARLFIGV---DS--VPMHMAAALGTPLVAL 285 (344)
T ss_pred HHHHHHHhCCEEEec---CC--HHHHHHHHcCCCEEEE
Confidence 999999999999966 33 2445588999999985
|
This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II. |
| >TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.091 Score=49.79 Aligned_cols=99 Identities=12% Similarity=0.014 Sum_probs=63.2
Q ss_pred CcEEEEEecc-CCCCC--hHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCC
Q 012436 269 YPAIISVAQF-RPEKA--HPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLL 345 (464)
Q Consensus 269 ~~~i~~~G~~-~~~K~--~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~ 345 (464)
+.+++..|.- .+.|. .+...+.++.+.+. +.++++.|+..+. +..+++. +..+ ...+.+.|..+
T Consensus 175 ~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~------~~~ivl~G~~~e~---~~~~~i~---~~~~-~~~~~l~g~~s 241 (334)
T TIGR02195 175 PIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQ------GYQVVLFGSAKDH---PAGNEIE---ALLP-GELRNLAGETS 241 (334)
T ss_pred CEEEEcCCCCCCccCCCCHHHHHHHHHHHHHC------CCEEEEEEChhhH---HHHHHHH---HhCC-cccccCCCCCC
Confidence 3455666653 35554 45666777666542 5788999876432 2223332 2221 12344778888
Q ss_pred hhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEe
Q 012436 346 YRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAH 385 (464)
Q Consensus 346 ~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~ 385 (464)
-.|+..+++.||++|.. ++. .+-=|.|.|+|+|+-
T Consensus 242 L~el~ali~~a~l~I~~---DSG--p~HlAaA~~~P~i~l 276 (334)
T TIGR02195 242 LDEAVDLIALAKAVVTN---DSG--LMHVAAALNRPLVAL 276 (334)
T ss_pred HHHHHHHHHhCCEEEee---CCH--HHHHHHHcCCCEEEE
Confidence 89999999999999966 322 344578999999984
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0033 Score=53.67 Aligned_cols=156 Identities=17% Similarity=0.149 Sum_probs=72.7
Q ss_pred eEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeeccccccccc
Q 012436 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (464)
Q Consensus 36 kI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (464)
+...+|-.. -|--..+..|++.|.+...++.+++-+... ...+ .....+.. .+.+.+++.
T Consensus 22 ~~iWiHa~S---vGE~~a~~~Li~~l~~~~p~~~illT~~T~--tg~~---~~~~~~~~----~v~~~~~P~-------- 81 (186)
T PF04413_consen 22 PLIWIHAAS---VGEVNAARPLIKRLRKQRPDLRILLTTTTP--TGRE---MARKLLPD----RVDVQYLPL-------- 81 (186)
T ss_dssp T-EEEE-SS---HHHHHHHHHHHHHHTT---TS-EEEEES-C--CHHH---HHHGG-GG----G-SEEE-----------
T ss_pred CcEEEEECC---HHHHHHHHHHHHHHHHhCCCCeEEEEecCC--chHH---HHHHhCCC----CeEEEEeCc--------
Confidence 555555322 267788899999999986677776665432 1111 12211111 112222222
Q ss_pred CcceehhhhchhhhHHHHHHhhhcCCcEEE--ecccccccchhhhccCceEEEEeeCCcchhhhhhcccccccccCCCcc
Q 012436 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYF--DTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNAS 193 (464)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~--~~~~~~~~~~~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~ 193 (464)
.......+.++..+||+++ .+..++..+..++..|+|+++-.-
T Consensus 82 -----------D~~~~~~rfl~~~~P~~~i~~EtElWPnll~~a~~~~ip~~LvNa------------------------ 126 (186)
T PF04413_consen 82 -----------DFPWAVRRFLDHWRPDLLIWVETELWPNLLREAKRRGIPVVLVNA------------------------ 126 (186)
T ss_dssp -----------SSHHHHHHHHHHH--SEEEEES----HHHHHH-----S-EEEEEE------------------------
T ss_pred -----------cCHHHHHHHHHHhCCCEEEEEccccCHHHHHHHhhcCCCEEEEee------------------------
Confidence 1133445668888999776 344555555567788999987433
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecC
Q 012436 194 IAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYP 251 (464)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~ 251 (464)
..+..+...++.+.++.+.+++..|.|.+.|+..++.+.+.+..++++.+..|
T Consensus 127 -----rls~~s~~~~~~~~~~~r~~l~~f~~i~aqs~~da~r~~~lG~~~~~v~v~Gn 179 (186)
T PF04413_consen 127 -----RLSERSFRRYRRFPFLFRPLLSRFDRILAQSEADAERFRKLGAPPERVHVTGN 179 (186)
T ss_dssp -------------------HHHHHHGGG-SEEEESSHHHHHHHHTTT-S--SEEE---
T ss_pred -----eeccccchhhhhhHHHHHHHHHhCCEEEECCHHHHHHHHHcCCCcceEEEeCc
Confidence 01111112233345567888899999999999999999998655678887765
|
Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B. |
| >PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.058 Score=51.48 Aligned_cols=100 Identities=11% Similarity=-0.006 Sum_probs=62.4
Q ss_pred CcEEEEEecc-CCCCC--hHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCC---CcEEEcc
Q 012436 269 YPAIISVAQF-RPEKA--HPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVD---GNVEFYK 342 (464)
Q Consensus 269 ~~~i~~~G~~-~~~K~--~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~---~~v~~~g 342 (464)
+.+.+..|.- .+.|. .+.+.+.++.+.. .++++++.|+..+. +..++..+..+-. ..+.+.|
T Consensus 181 ~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~------~~~~vvl~Gg~~e~------~~~~~i~~~~~~~~~~~~~~l~g 248 (348)
T PRK10916 181 PIIGFCPGAEFGPAKRWPHYHYAELAQQLID------EGYQVVLFGSAKDH------EAGNEILAALNTEQQAWCRNLAG 248 (348)
T ss_pred CEEEEeCCCCCccccCCCHHHHHHHHHHHHH------CCCeEEEEeCHHhH------HHHHHHHHhcccccccceeeccC
Confidence 3455666653 34554 3556666666653 26788999875432 2223333322211 1256678
Q ss_pred CCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEe
Q 012436 343 NLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAH 385 (464)
Q Consensus 343 ~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~ 385 (464)
..+-.++..+++.||++|.. ++. .+-=|.|.|+|+|+-
T Consensus 249 ~~sL~el~ali~~a~l~I~n---DTG--p~HlAaA~g~P~val 286 (348)
T PRK10916 249 ETQLEQAVILIAACKAIVTN---DSG--LMHVAAALNRPLVAL 286 (348)
T ss_pred CCCHHHHHHHHHhCCEEEec---CCh--HHHHHHHhCCCEEEE
Confidence 88889999999999999965 322 344588999999974
|
|
| >PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.094 Score=48.49 Aligned_cols=256 Identities=14% Similarity=0.106 Sum_probs=146.5
Q ss_pred CCcEEEecccccc--cchhhhccCceEEEEeeCCcchhhhhhcccccccccCCCcccccchhhhHHHHHHHHHHHHHHHH
Q 012436 140 TPLYYFDTSGYAF--TYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGL 217 (464)
Q Consensus 140 ~~Dvv~~~~~~~~--~~~~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (464)
+.||+|..+.... .....+.+|.++|.++.+.....++-..+.++.... -.
T Consensus 73 ~lDVlIEmg~ql~~~~~~~~~~~G~KvV~y~~GndYv~~~E~~lF~k~~~~---------------------------~f 125 (364)
T PF10933_consen 73 ELDVLIEMGAQLDPEWLDYMRARGGKVVSYRCGNDYVMDIESMLFNKPSGH---------------------------LF 125 (364)
T ss_pred cCCEEEEccCccCHHHHHHHHHcCCeEEEEeCCchHHHHhhHHhcCCCCCc---------------------------cC
Confidence 7899996544222 112555899999999996665444444433222100 00
Q ss_pred HhhcCCEEEEcCHHH---HHHHHHHhCCCCCeEEecCCCCCCCCccC----C-------CCCCCCCcEEE-EEeccCCCC
Q 012436 218 VGSCADLAMVNSSWT---QSHIEKLWGIPDRIKRVYPPCDTSGLQVL----P-------LERSTEYPAII-SVAQFRPEK 282 (464)
Q Consensus 218 ~~~~ad~vi~~S~~~---~~~~~~~~~~~~~i~~i~~~~d~~~~~~~----~-------~~~~~~~~~i~-~~G~~~~~K 282 (464)
.-...|.|.+.-+.. +.+++-.. ..++.++|.--++-.++.. + ..+.....++. |=-++.-.|
T Consensus 126 ~~~~yD~VW~lPq~~~~~~~yl~~l~--r~Pv~~vP~iWsP~F~~~~~~~l~~~~~~FGY~p~~~~~RvavfEPNi~vvK 203 (364)
T PF10933_consen 126 NGAPYDEVWTLPQFENTCAPYLETLH--RCPVRVVPHIWSPRFLDQRIAQLPEHGLRFGYQPGRPGKRVAVFEPNISVVK 203 (364)
T ss_pred CCCCCceeEeccchhhhchHHHHHHh--cCCceeeCccCCchhHHHHHHhhhhcCCccccccCCCCceEEEecCCceEEe
Confidence 115667777665533 34455444 4566677765544333211 0 11112223332 223344445
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCcEEEEEcCC-CCCccHHHHHHHHHHHHhcCC--CCcEEEccCCChhHHHHHHhc-CcE
Q 012436 283 AHPLQLEAFSVALRKLDADLPRPRLQFVGSC-RNKSDEERLQSLKDKSIELKV--DGNVEFYKNLLYRDLVKLLGG-AVV 358 (464)
Q Consensus 283 ~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~-~~~~~~~~~~~l~~~~~~~~l--~~~v~~~g~~~~~~~~~~l~~-ad~ 358 (464)
..-.=+-+.+++-...++ .+..+.+.+. ..++. .++...+..+.+ .....|.|+. ++..++++ .|+
T Consensus 204 ~~~~PmLi~E~aYR~~P~---~v~~~~V~Nt~~~ke~----~~F~~f~~~ldlvr~gkasfegR~---~~p~fla~~tD~ 273 (364)
T PF10933_consen 204 TCFIPMLICEEAYRADPD---AVEHVYVTNTYHLKEH----PTFVNFANSLDLVRDGKASFEGRF---DFPDFLAQHTDA 273 (364)
T ss_pred ecCccHHHHHHHHHhChh---hcceEEEecchhhhcC----HHHHHHHHhhHHhhcCeeEEeeec---ChHHHHHhCCCE
Confidence 533223333333333321 3455555543 22222 445555555544 3567888887 55555654 699
Q ss_pred EEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC--CHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 012436 359 GIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ--NAEEYADAIVKIISMPETERLEMAAAAR 436 (464)
Q Consensus 359 ~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~ 436 (464)
+|.--|.-+.....+|++--|=|.|-.. .++ ++.|+.++ |..+=++++.+++...+...+...++++
T Consensus 274 VvSHqWeN~lNYlY~daLyggYPLVHNS------~~l-----~d~GYYY~~fD~~~G~r~L~~A~~~HD~~~~~Y~~ra~ 342 (364)
T PF10933_consen 274 VVSHQWENPLNYLYYDALYGGYPLVHNS------PLL-----KDVGYYYPDFDAFEGARQLLRAIREHDADLDAYRARAR 342 (364)
T ss_pred EEeccccchhhHHHHHHHhcCCCcccCc------chh-----cccCcCCCCccHHHHHHHHHHHHHHccccHHHHHHHHH
Confidence 9887777788888899999999988743 122 35888887 8888888888877646667788888888
Q ss_pred HHHHccCHH
Q 012436 437 RRAARFSEQ 445 (464)
Q Consensus 437 ~~~~~~s~~ 445 (464)
+.+..++..
T Consensus 343 ~~l~~~~p~ 351 (364)
T PF10933_consen 343 RLLDRLSPE 351 (364)
T ss_pred HHHHhhCCC
Confidence 887655544
|
|
| >PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.027 Score=52.28 Aligned_cols=150 Identities=13% Similarity=-0.020 Sum_probs=89.4
Q ss_pred hcCCEEEEcCHHHHHHHHHHhCCCCCeEEe---cCCCCCCCCccC------CCCCCCCCcEEEEEeccCCCC--ChH---
Q 012436 220 SCADLAMVNSSWTQSHIEKLWGIPDRIKRV---YPPCDTSGLQVL------PLERSTEYPAIISVAQFRPEK--AHP--- 285 (464)
Q Consensus 220 ~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i---~~~~d~~~~~~~------~~~~~~~~~~i~~~G~~~~~K--~~~--- 285 (464)
+..|.+|++... ......++... +|.++.+..... .....+.+...+.+|.-+... +.+
T Consensus 96 ~~FDlvi~p~HD-------~~~~~~Nvl~t~ga~~~i~~~~l~~a~~~~~~~~~~l~~p~~avLIGG~s~~~~~~~~~~~ 168 (311)
T PF06258_consen 96 RPFDLVIVPEHD-------RLPRGPNVLPTLGAPNRITPERLAEAAAAWAPRLAALPRPRVAVLIGGDSKHYRWDEEDAE 168 (311)
T ss_pred cccCEEEECccc-------CcCCCCceEecccCCCcCCHHHHHHHHHhhhhhhccCCCCeEEEEECcCCCCcccCHHHHH
Confidence 677999998765 11113444322 344444433211 011123445666777543332 333
Q ss_pred HHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHHHhcCcEEEEcCCC
Q 012436 286 LQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMID 365 (464)
Q Consensus 286 ~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~ 365 (464)
.+++.+..+.+.. ...+.|..+.... .+..+.|++..+ -.+.+.+...-+..-+..+|+.||.++.+.
T Consensus 169 ~l~~~l~~~~~~~-----~~~~~vttSRRTp--~~~~~~L~~~~~---~~~~~~~~~~~~~nPy~~~La~ad~i~VT~-- 236 (311)
T PF06258_consen 169 RLLDQLAALAAAY-----GGSLLVTTSRRTP--PEAEAALRELLK---DNPGVYIWDGTGENPYLGFLAAADAIVVTE-- 236 (311)
T ss_pred HHHHHHHHHHHhC-----CCeEEEEcCCCCc--HHHHHHHHHhhc---CCCceEEecCCCCCcHHHHHHhCCEEEEcC--
Confidence 5666666666664 5789998876543 233344444443 234664555555667889999999998872
Q ss_pred CCCChHHHHHHHhCCcEEEeCCCC
Q 012436 366 EHFGISVVEYMAAGAIPIAHNSAG 389 (464)
Q Consensus 366 e~~~~~~~Ea~a~G~PvI~~~~~~ 389 (464)
..-..+.||.+.|+||.+....+
T Consensus 237 -DSvSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 237 -DSVSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred -ccHHHHHHHHHcCCCEEEecCCC
Confidence 22335799999999999988765
|
The function of this family is unknown. |
| >PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0027 Score=63.92 Aligned_cols=133 Identities=20% Similarity=0.153 Sum_probs=73.7
Q ss_pred CCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChh
Q 012436 268 EYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYR 347 (464)
Q Consensus 268 ~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~ 347 (464)
++.+++.+|++.. ...+..++++....++. |. +++..-.+... ..+ ++|+.+..++|+.
T Consensus 276 ~~vv~vsfGs~~~-~~~~~~~~~~~~~~~~~----~~-~~iW~~~~~~~------~~l---------~~n~~~~~W~PQ~ 334 (500)
T PF00201_consen 276 KGVVYVSFGSIVS-SMPEEKLKEIAEAFENL----PQ-RFIWKYEGEPP------ENL---------PKNVLIVKWLPQN 334 (500)
T ss_dssp TEEEEEE-TSSST-T-HHHHHHHHHHHHHCS----TT-EEEEEETCSHG------CHH---------HTTEEEESS--HH
T ss_pred CCEEEEecCcccc-hhHHHHHHHHHHHHhhC----CC-ccccccccccc------ccc---------cceEEEeccccch
Confidence 4466777787643 23444444444444443 34 66665544211 111 4689999999886
Q ss_pred HHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCcc---ceecccCCccceeecC----CHHHHHHHHHHH
Q 012436 348 DLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKM---DIVLEEDGQQTGFLAQ----NAEEYADAIVKI 420 (464)
Q Consensus 348 ~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~---~~v~~~~~~~~g~~~~----~~~~la~~i~~l 420 (464)
++ |+...+-++-+ -|.-.++.||+.+|+|+|+-+.-+.-. ..+.+ .+.|...+ +.+++.++|.++
T Consensus 335 ~l---L~hp~v~~fit--HgG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~---~G~g~~l~~~~~~~~~l~~ai~~v 406 (500)
T PF00201_consen 335 DL---LAHPRVKLFIT--HGGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEE---KGVGVVLDKNDLTEEELRAAIREV 406 (500)
T ss_dssp HH---HTSTTEEEEEE--S--HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHH---TTSEEEEGGGC-SHHHHHHHHHHH
T ss_pred hh---hhcccceeeee--ccccchhhhhhhccCCccCCCCcccCCccceEEEE---EeeEEEEEecCCcHHHHHHHHHHH
Confidence 55 66554432221 244568999999999999977543211 11223 34555443 889999999999
Q ss_pred HcCCHHHHHH
Q 012436 421 ISMPETERLE 430 (464)
Q Consensus 421 ~~~~~~~~~~ 430 (464)
++ |+..++.
T Consensus 407 l~-~~~y~~~ 415 (500)
T PF00201_consen 407 LE-NPSYKEN 415 (500)
T ss_dssp HH-SHHHHHH
T ss_pred Hh-hhHHHHH
Confidence 99 8754433
|
This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A .... |
| >PLN02562 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.039 Score=54.30 Aligned_cols=88 Identities=11% Similarity=0.047 Sum_probs=57.1
Q ss_pred CCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCc---cceecccCCccceeecC--C
Q 012436 335 DGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPK---MDIVLEEDGQQTGFLAQ--N 409 (464)
Q Consensus 335 ~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~---~~~v~~~~~~~~g~~~~--~ 409 (464)
++|+.+.+++|+.++ |+..++..+- ++-| -.+++||+.+|+|+|+-...+-- ...+.+. -+.|+-.. +
T Consensus 327 ~~~~~v~~w~PQ~~i---L~h~~v~~fv-tH~G-~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~--~g~g~~~~~~~ 399 (448)
T PLN02562 327 SKQGKVVSWAPQLEV---LKHQAVGCYL-THCG-WNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDV--WKIGVRISGFG 399 (448)
T ss_pred ccCEEEEecCCHHHH---hCCCccceEE-ecCc-chhHHHHHHcCCCEEeCCcccchHHHHHHHHHH--hCceeEeCCCC
Confidence 467888899988775 5555543332 2233 45899999999999997644321 1112210 24454443 8
Q ss_pred HHHHHHHHHHHHcCCHHHHHH
Q 012436 410 AEEYADAIVKIISMPETERLE 430 (464)
Q Consensus 410 ~~~la~~i~~l~~~~~~~~~~ 430 (464)
.++++++|++++. +++.+++
T Consensus 400 ~~~l~~~v~~~l~-~~~~r~~ 419 (448)
T PLN02562 400 QKEVEEGLRKVME-DSGMGER 419 (448)
T ss_pred HHHHHHHHHHHhC-CHHHHHH
Confidence 8999999999998 8654443
|
|
| >PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.041 Score=54.09 Aligned_cols=91 Identities=15% Similarity=0.075 Sum_probs=57.7
Q ss_pred CCcEEEccCCChhHHHHHHhcCcE--EEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCc---cceecccCCccceeecC-
Q 012436 335 DGNVEFYKNLLYRDLVKLLGGAVV--GIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPK---MDIVLEEDGQQTGFLAQ- 408 (464)
Q Consensus 335 ~~~v~~~g~~~~~~~~~~l~~ad~--~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~---~~~v~~~~~~~~g~~~~- 408 (464)
.+|..+.+++|+.++ ++..++ ||. +-| -++++||+++|+|+|+-...+.- ...+.+. -+.|+..+
T Consensus 323 ~~~g~v~~w~PQ~~i---L~h~~v~~fvt---H~G-~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~--~~~G~~~~~ 393 (451)
T PLN02410 323 SGRGYIVKWAPQKEV---LSHPAVGGFWS---HCG-WNSTLESIGEGVPMICKPFSSDQKVNARYLECV--WKIGIQVEG 393 (451)
T ss_pred cCCeEEEccCCHHHH---hCCCccCeeee---cCc-hhHHHHHHHcCCCEEeccccccCHHHHHHHHHH--hCeeEEeCC
Confidence 457778899988875 666444 552 233 34899999999999997644321 1112220 14565542
Q ss_pred --CHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 012436 409 --NAEEYADAIVKIISMPETERLEMAAAAR 436 (464)
Q Consensus 409 --~~~~la~~i~~l~~~~~~~~~~~~~~~~ 436 (464)
+.++++++|++++. +++ .+++.++++
T Consensus 394 ~~~~~~v~~av~~lm~-~~~-~~~~r~~a~ 421 (451)
T PLN02410 394 DLDRGAVERAVKRLMV-EEE-GEEMRKRAI 421 (451)
T ss_pred cccHHHHHHHHHHHHc-CCc-HHHHHHHHH
Confidence 88999999999997 753 233444443
|
|
| >PLN02670 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.026 Score=55.71 Aligned_cols=113 Identities=13% Similarity=0.097 Sum_probs=70.2
Q ss_pred cEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCc---cceecccCCccceeecC-----
Q 012436 337 NVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPK---MDIVLEEDGQQTGFLAQ----- 408 (464)
Q Consensus 337 ~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~---~~~v~~~~~~~~g~~~~----- 408 (464)
.+.+.+++|+.++ |+...+..+-+ .+.-++++||+++|+|+|+-...+.- ...+.. .+.|+.++
T Consensus 340 G~vv~~W~PQ~~I---L~H~~v~~Fvt--HcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~---~g~Gv~l~~~~~~ 411 (472)
T PLN02670 340 GMIHVGWVPQVKI---LSHESVGGFLT--HCGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHG---KKLGLEVPRDERD 411 (472)
T ss_pred CeEEeCcCCHHHH---hcCcccceeee--cCCcchHHHHHHcCCCEEeCcchhccHHHHHHHHH---cCeeEEeeccccC
Confidence 3777899988775 66665533322 23346899999999999997644220 112223 35554441
Q ss_pred ---CHHHHHHHHHHHHcCCHHHHHHHHHHHHH---HH-HccCHHHHHHHHHHHHHHHH
Q 012436 409 ---NAEEYADAIVKIISMPETERLEMAAAARR---RA-ARFSEQRFYEDFKAAIRPIL 459 (464)
Q Consensus 409 ---~~~~la~~i~~l~~~~~~~~~~~~~~~~~---~~-~~~s~~~~~~~~~~~~~~~~ 459 (464)
+.+++.++|++++. +++ -.++++++++ .+ ++=..+++++.+.+.+.+..
T Consensus 412 ~~~~~e~i~~av~~vm~-~~~-g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~~~~ 467 (472)
T PLN02670 412 GSFTSDSVAESVRLAMV-DDA-GEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLRENR 467 (472)
T ss_pred CcCcHHHHHHHHHHHhc-Ccc-hHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHhc
Confidence 58899999999997 642 2233344433 33 55666677777777766554
|
|
| >PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.017 Score=47.11 Aligned_cols=83 Identities=14% Similarity=0.083 Sum_probs=45.9
Q ss_pred HHHhhhcCCcEEEecccccccc--hhh-hccCceEEEEeeCCcchhhhhhcccccccccCCCcccccchhhhHHHHHHHH
Q 012436 133 WEALCKFTPLYYFDTSGYAFTY--PLA-RIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYT 209 (464)
Q Consensus 133 ~~~l~~~~~Dvv~~~~~~~~~~--~~~-~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (464)
.+......+|++++++.....- ++. ...++|.++|+|.... .|--.. ...+...
T Consensus 52 ~~~~~~~~~dll~aTsmldLa~l~gL~p~l~~~p~ilYFHENQl-------------~YP~~~-----~~~rd~~----- 108 (168)
T PF12038_consen 52 QQIPLSHSYDLLFATSMLDLATLRGLRPDLANVPKILYFHENQL-------------AYPVSP-----GQERDFQ----- 108 (168)
T ss_pred hccccccCCCEEEeeccccHHHHHhhccCCCCCCEEEEEecCcc-------------cCCCCC-----Ccccccc-----
Confidence 3445566789999776544322 233 3678999999992211 010000 0000000
Q ss_pred HHHHHHHHHhhcCCEEEEcCHHHHHHHHHH
Q 012436 210 FFSWMYGLVGSCADLAMVNSSWTQSHIEKL 239 (464)
Q Consensus 210 ~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~ 239 (464)
+....-...-.||.|+.+|.+.++.+-+-
T Consensus 109 -~~~~ni~saLaAD~v~FNS~~nr~sFL~~ 137 (168)
T PF12038_consen 109 -YGMNNIYSALAADRVVFNSAFNRDSFLDG 137 (168)
T ss_pred -HHHHHHHHHHhceeeeecchhhHHHHHHH
Confidence 11112233467999999999998887553
|
It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important. |
| >PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.02 Score=51.69 Aligned_cols=104 Identities=15% Similarity=0.098 Sum_probs=59.3
Q ss_pred CCCcEEEEEeccCCCCChH--HHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCC
Q 012436 267 TEYPAIISVAQFRPEKAHP--LQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNL 344 (464)
Q Consensus 267 ~~~~~i~~~G~~~~~K~~~--~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~ 344 (464)
+++.+++..|.-.+.|... ...+.++.+.+. ...++++|...+. ..+..++..+... ...+.+.|..
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~------~~~vvl~g~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~ 172 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKER------GYRVVLLGGPEEQ----EKEIADQIAAGLQ-NPVINLAGKT 172 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCC------T-EEEE--SSHHH----HHHHHHHHHTTHT-TTTEEETTTS
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhh------CceEEEEccchHH----HHHHHHHHHHhcc-cceEeecCCC
Confidence 4446777777767777643 355555555432 4688888876421 1122233333322 1268888998
Q ss_pred ChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeC
Q 012436 345 LYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHN 386 (464)
Q Consensus 345 ~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~ 386 (464)
+-.|+..+++.||++|.+ ++ ..+-=|.|.|+|+|+--
T Consensus 173 ~l~e~~ali~~a~~~I~~---Dt--g~~HlA~a~~~p~v~lf 209 (247)
T PF01075_consen 173 SLRELAALISRADLVIGN---DT--GPMHLAAALGTPTVALF 209 (247)
T ss_dssp -HHHHHHHHHTSSEEEEE---SS--HHHHHHHHTT--EEEEE
T ss_pred CHHHHHHHHhcCCEEEec---CC--hHHHHHHHHhCCEEEEe
Confidence 999999999999999976 22 24455888999999863
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A. |
| >PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.14 Score=52.31 Aligned_cols=197 Identities=15% Similarity=0.130 Sum_probs=115.6
Q ss_pred HHHHHhhcCCEEEEcCHHHHHHHHH-----HhCC-CCCeEEecCCCCCCCCccC-------------C------------
Q 012436 214 MYGLVGSCADLAMVNSSWTQSHIEK-----LWGI-PDRIKRVYPPCDTSGLQVL-------------P------------ 262 (464)
Q Consensus 214 ~~~~~~~~ad~vi~~S~~~~~~~~~-----~~~~-~~~i~~i~~~~d~~~~~~~-------------~------------ 262 (464)
|...+++.+..+-.+|+-..+.+++ ++.. +.++.-+-|||....+-.. .
T Consensus 324 Ma~LAl~~S~~vNGVS~LH~ev~k~~~f~~f~~l~P~kf~nvTNGVh~rrWl~~~nP~L~~L~~~~iG~~W~~d~~~l~~ 403 (713)
T PF00343_consen 324 MANLALRGSHSVNGVSKLHGEVLKQMVFKDFYELWPEKFGNVTNGVHPRRWLSQANPELSELITEYIGDDWRTDLEQLEK 403 (713)
T ss_dssp HHHHHHHCESEEEESSHHHHHHHHHTTTHHHHHHSGGGEEE----B-TCCCCCCTSHHHHHHHHHHHTSGGGCSGGGGGG
T ss_pred hhHHHHHhcccccchHHHHHHHHHHHHhhhhhhcCCceeeccccCccCcccccccCHHHHHHHHHHhccccccCHHHHHH
Confidence 3345677788888999888776643 2222 6778888999877665310 0
Q ss_pred -----C-----------------------------CCCCCCcEEEEEeccCCCCChHH-H---HHHHHHHHHHhcCCCCC
Q 012436 263 -----L-----------------------------ERSTEYPAIISVAQFRPEKAHPL-Q---LEAFSVALRKLDADLPR 304 (464)
Q Consensus 263 -----~-----------------------------~~~~~~~~i~~~G~~~~~K~~~~-l---l~a~~~l~~~~~~~~p~ 304 (464)
. ...++....+++-|+..+|...+ + ++-+.+++........+
T Consensus 404 l~~~~dd~~~~~~~~~vK~~~K~rl~~~i~~~~~~~ldp~slfdv~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~P 483 (713)
T PF00343_consen 404 LEKFADDEEFQEELREVKQENKERLAEYIKKRTGVELDPDSLFDVQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRP 483 (713)
T ss_dssp GGGGCCSHHHHHHHHHHHHHHHHHHHHHHHHHHSS---TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-
T ss_pred HHHhhCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcchhhhhhhhhcccccccCcccccHHHHHHHHHhcccCCCCC
Confidence 0 00045577899999999998877 3 34455555542111235
Q ss_pred cEEEEEcCCCCCccHHHHHHHHHHHHhc--------CCCC--cEEEccCCChhHHHHHHhcCcEEEEcC--CCCCCChHH
Q 012436 305 PRLQFVGSCRNKSDEERLQSLKDKSIEL--------KVDG--NVEFYKNLLYRDLVKLLGGAVVGIHSM--IDEHFGISV 372 (464)
Q Consensus 305 ~~l~i~G~~~~~~~~~~~~~l~~~~~~~--------~l~~--~v~~~g~~~~~~~~~~l~~ad~~v~ps--~~e~~~~~~ 372 (464)
+++++.|...... ..-+++.+++.+. .+.+ +|.|+...+-.-...+++.+|+-+..| ..|..|++-
T Consensus 484 v~~IFaGKAhP~d--~~gK~iIk~I~~va~~in~Dp~v~~~lkVvFlenYdvslA~~lipg~DVwln~p~~p~EASGTSg 561 (713)
T PF00343_consen 484 VQFIFAGKAHPGD--YMGKEIIKLINNVAEVINNDPEVGDRLKVVFLENYDVSLAEKLIPGVDVWLNIPTRPKEASGTSG 561 (713)
T ss_dssp EEEEEE----TT---HHHHHHHHHHHHHHHHHCT-TTTCCGEEEEEETT-SHHHHHHHGGG-SEEEE---TTSSSS-SHH
T ss_pred eEEEEeccCCCCc--HHHHHHHHHHHHHHHHHhcChhhccceeEEeecCCcHHHHHHHhhhhhhhhhCCCCCccccCCCc
Confidence 7899988753321 1123333333221 2333 689999888888888999999999877 489999999
Q ss_pred HHHHHhCCcEEEeCCCCCccceecccCCccceeecC-CHHHHH
Q 012436 373 VEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ-NAEEYA 414 (464)
Q Consensus 373 ~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~-~~~~la 414 (464)
+-+|..|.+.+++--|.. -|+.+. .+.++.|++. +.+++.
T Consensus 562 MK~~~NGaL~lstlDG~n-iEi~e~-vG~eN~fiFG~~~~ev~ 602 (713)
T PF00343_consen 562 MKAAMNGALNLSTLDGWN-IEIAEA-VGEENIFIFGLTAEEVE 602 (713)
T ss_dssp HHHHHTT-EEEEESSTCH-HHHHHH-H-GGGSEEES-BHHHHH
T ss_pred chhhcCCCeEEecccchh-HHHHHh-cCCCcEEEcCCCHHHHH
Confidence 999999999999976765 566432 2246778886 555543
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B .... |
| >PLN02764 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.075 Score=52.08 Aligned_cols=224 Identities=7% Similarity=-0.050 Sum_probs=113.7
Q ss_pred hhcCCEEEEcCHHHH-HHHHHHhCC--CCCeEEecCCCCCC-CCccCC-------CCCCCCCcEEEEEeccCCCCChHHH
Q 012436 219 GSCADLAMVNSSWTQ-SHIEKLWGI--PDRIKRVYPPCDTS-GLQVLP-------LERSTEYPAIISVAQFRPEKAHPLQ 287 (464)
Q Consensus 219 ~~~ad~vi~~S~~~~-~~~~~~~~~--~~~i~~i~~~~d~~-~~~~~~-------~~~~~~~~~i~~~G~~~~~K~~~~l 287 (464)
.+.++.|+++|=... ..+.+.+.. ..++..|.+-+... ...... ..++++..+.+.+|+.... ..+.+
T Consensus 197 ~~~s~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPL~~~~~~~~~~~~~cl~WLD~q~~~sVvyvsfGS~~~~-~~~q~ 275 (453)
T PLN02764 197 LMNSDVIAIRTAREIEGNFCDYIEKHCRKKVLLTGPVFPEPDKTRELEERWVKWLSGYEPDSVVFCALGSQVIL-EKDQF 275 (453)
T ss_pred hccCCEEEEeccHHhhHHHHHHHHhhcCCcEEEeccCccCccccccchhHHHHHHhCCCCCceEEEeecccccC-CHHHH
Confidence 467888988875442 222233311 23565554432111 000000 1112444677777876331 22444
Q ss_pred HHHHHHHHHHhcCCCCCcEEEEEcC-CCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHHHhcC--cEEEEcCC
Q 012436 288 LEAFSVALRKLDADLPRPRLQFVGS-CRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGA--VVGIHSMI 364 (464)
Q Consensus 288 l~a~~~l~~~~~~~~p~~~l~i~G~-~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~a--d~~v~ps~ 364 (464)
-+.+..|..... ++.+++--. +.+.......+.+++..+. ..+.+.+++|+.++ ++.. ++||.
T Consensus 276 ~ela~gL~~s~~----pflwv~r~~~~~~~~~~~lp~~f~~r~~g----rG~v~~~W~PQ~~v---L~h~~v~~Fvt--- 341 (453)
T PLN02764 276 QELCLGMELTGS----PFLVAVKPPRGSSTIQEALPEGFEERVKG----RGVVWGGWVQQPLI---LSHPSVGCFVS--- 341 (453)
T ss_pred HHHHHHHHhCCC----CeEEEEeCCCCCcchhhhCCcchHhhhcc----CCcEEeCCCCHHHH---hcCcccCeEEe---
Confidence 455555443321 455554411 1110000111233333322 24677799988876 5554 44552
Q ss_pred CCCCChHHHHHHHhCCcEEEeCCCCCc---ccee-cccCCccceeec------C-CHHHHHHHHHHHHcCCH-HHHHHHH
Q 012436 365 DEHFGISVVEYMAAGAIPIAHNSAGPK---MDIV-LEEDGQQTGFLA------Q-NAEEYADAIVKIISMPE-TERLEMA 432 (464)
Q Consensus 365 ~e~~~~~~~Ea~a~G~PvI~~~~~~~~---~~~v-~~~~~~~~g~~~------~-~~~~la~~i~~l~~~~~-~~~~~~~ 432 (464)
.+.-++++||+.+|+|+|+-...+.- ...+ +. -+.|+.. . +.+++.++++++++ ++ +..+++.
T Consensus 342 -H~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~---~g~gv~~~~~~~~~~~~e~i~~av~~vm~-~~~~~g~~~r 416 (453)
T PLN02764 342 -HCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDE---LKVSVEVAREETGWFSKESLRDAINSVMK-RDSEIGNLVK 416 (453)
T ss_pred -cCCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHH---hceEEEeccccCCccCHHHHHHHHHHHhc-CCchhHHHHH
Confidence 23356899999999999997654321 1122 22 2444432 2 78999999999997 65 4455555
Q ss_pred HHHHHH---H-HccCHHHHHHHHHHHHHHHHhhc
Q 012436 433 AAARRR---A-ARFSEQRFYEDFKAAIRPILCHA 462 (464)
Q Consensus 433 ~~~~~~---~-~~~s~~~~~~~~~~~~~~~~~~~ 462 (464)
+++++. + +.=|-....+++.+.+.+...+.
T Consensus 417 ~~a~~~~~~~~~~GSS~~~l~~lv~~~~~~~~~~ 450 (453)
T PLN02764 417 KNHTKWRETLASPGLLTGYVDNFIESLQDLVSGT 450 (453)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcccc
Confidence 555443 3 33344445556666665555443
|
|
| >PLN02554 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.04 Score=54.89 Aligned_cols=80 Identities=13% Similarity=-0.070 Sum_probs=50.0
Q ss_pred CCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCc---c-ceecccCCccceeec---
Q 012436 335 DGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPK---M-DIVLEEDGQQTGFLA--- 407 (464)
Q Consensus 335 ~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~---~-~~v~~~~~~~~g~~~--- 407 (464)
.+++.+.+++|+.++..- .++.+|| ++-| -.+++||+.+|+|+|+-...+-- . ..+.. -+.|...
T Consensus 341 ~~~g~v~~W~PQ~~iL~H-~~v~~Fv---tH~G-~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~---~g~Gv~l~~~ 412 (481)
T PLN02554 341 KDIGKVIGWAPQVAVLAK-PAIGGFV---THCG-WNSILESLWFGVPMAAWPLYAEQKFNAFEMVEE---LGLAVEIRKY 412 (481)
T ss_pred ccCceEEeeCCHHHHhCC-cccCccc---ccCc-cchHHHHHHcCCCEEecCccccchhhHHHHHHH---hCceEEeecc
Confidence 356777899987765211 3444455 2233 45899999999999997644220 1 11222 2334322
Q ss_pred -----------C-CHHHHHHHHHHHHc
Q 012436 408 -----------Q-NAEEYADAIVKIIS 422 (464)
Q Consensus 408 -----------~-~~~~la~~i~~l~~ 422 (464)
. +.+++.++|++++.
T Consensus 413 ~~~~~~~~~~~~~~~e~l~~av~~vm~ 439 (481)
T PLN02554 413 WRGDLLAGEMETVTAEEIERGIRCLME 439 (481)
T ss_pred ccccccccccCeEcHHHHHHHHHHHhc
Confidence 2 78899999999995
|
|
| >PLN03004 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.047 Score=53.56 Aligned_cols=82 Identities=15% Similarity=0.021 Sum_probs=55.7
Q ss_pred CcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCc---ccee-cccCCccceeec----
Q 012436 336 GNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPK---MDIV-LEEDGQQTGFLA---- 407 (464)
Q Consensus 336 ~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~---~~~v-~~~~~~~~g~~~---- 407 (464)
.++.+.+++|+.+ +++.+++..+-+ .+.-++++||+++|+|+|+-...+.- ...+ .. -+.|+..
T Consensus 334 ~g~~v~~W~PQ~~---iL~H~~v~~FvT--H~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~---~g~g~~l~~~~ 405 (451)
T PLN03004 334 KGMVVKSWAPQVP---VLNHKAVGGFVT--HCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDE---IKIAISMNESE 405 (451)
T ss_pred CcEEEEeeCCHHH---HhCCCccceEec--cCcchHHHHHHHcCCCEEeccccccchhhHHHHHHH---hCceEEecCCc
Confidence 4788999998877 578888743332 23345899999999999997643220 1122 22 2455443
Q ss_pred --C-CHHHHHHHHHHHHcCCHH
Q 012436 408 --Q-NAEEYADAIVKIISMPET 426 (464)
Q Consensus 408 --~-~~~~la~~i~~l~~~~~~ 426 (464)
. +.++++++|+++++ ++.
T Consensus 406 ~~~~~~e~l~~av~~vm~-~~~ 426 (451)
T PLN03004 406 TGFVSSTEVEKRVQEIIG-ECP 426 (451)
T ss_pred CCccCHHHHHHHHHHHhc-CHH
Confidence 1 78999999999998 754
|
|
| >PLN02534 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=96.40 E-value=1.2 Score=44.38 Aligned_cols=49 Identities=12% Similarity=-0.086 Sum_probs=35.2
Q ss_pred CCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCC
Q 012436 335 DGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSA 388 (464)
Q Consensus 335 ~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~ 388 (464)
..++.+.|++|+.+ +++..++..+- ..+..++++||+++|+|+|+-...
T Consensus 343 ~~g~~v~~w~pq~~---iL~h~~v~~fv--tH~G~ns~~ea~~~GvP~v~~P~~ 391 (491)
T PLN02534 343 GRGLLIKGWAPQVL---ILSHPAIGGFL--THCGWNSTIEGICSGVPMITWPLF 391 (491)
T ss_pred cCCeeccCCCCHHH---HhcCCccceEE--ecCccHHHHHHHHcCCCEEecccc
Confidence 34788889998855 56677763332 224456899999999999997654
|
|
| >PLN00414 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.14 Score=50.35 Aligned_cols=152 Identities=5% Similarity=-0.110 Sum_probs=84.5
Q ss_pred CCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcC-CCCCccHHHHHHHHHHHHhcCCCCcEEEccCCC
Q 012436 267 TEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGS-CRNKSDEERLQSLKDKSIELKVDGNVEFYKNLL 345 (464)
Q Consensus 267 ~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~-~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~ 345 (464)
++..+.+.+|+.... ..+.+.+....|..... ++-+++... +.........+.+++..+. ....+.|++|
T Consensus 251 ~~sVvyvsfGS~~~~-~~~q~~e~a~gL~~s~~----~Flwvvr~~~~~~~~~~~lp~~f~~r~~~----~g~vv~~w~P 321 (446)
T PLN00414 251 PGSVVFCAFGTQFFF-EKDQFQEFCLGMELTGL----PFLIAVMPPKGSSTVQEALPEGFEERVKG----RGIVWEGWVE 321 (446)
T ss_pred CCceEEEeecccccC-CHHHHHHHHHHHHHcCC----CeEEEEecCCCcccchhhCChhHHHHhcC----CCeEEeccCC
Confidence 344666777876433 22455555555544431 444444321 1110011122345555543 2456679998
Q ss_pred hhHHHHHHhcC--cEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCc---ccee-cccCCccceeec-------CCHHH
Q 012436 346 YRDLVKLLGGA--VVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPK---MDIV-LEEDGQQTGFLA-------QNAEE 412 (464)
Q Consensus 346 ~~~~~~~l~~a--d~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~---~~~v-~~~~~~~~g~~~-------~~~~~ 412 (464)
+.++ ++.. +.||. .+.-++++||+++|+|+|+-...+.- ...+ +. -+.|... -+.++
T Consensus 322 Q~~v---L~h~~v~~fvt----H~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~---~g~g~~~~~~~~~~~~~~~ 391 (446)
T PLN00414 322 QPLI---LSHPSVGCFVN----HCGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEE---LEVSVKVQREDSGWFSKES 391 (446)
T ss_pred HHHH---hcCCccceEEe----cCchhHHHHHHHcCCCEEecCcccchHHHHHHHHHH---hCeEEEeccccCCccCHHH
Confidence 8775 5555 44552 23346899999999999997644220 1122 22 2445433 17889
Q ss_pred HHHHHHHHHcCCH-HHHHHHHHHHHHH
Q 012436 413 YADAIVKIISMPE-TERLEMAAAARRR 438 (464)
Q Consensus 413 la~~i~~l~~~~~-~~~~~~~~~~~~~ 438 (464)
+++++++++. ++ +..+++.+++++.
T Consensus 392 i~~~v~~~m~-~~~e~g~~~r~~a~~~ 417 (446)
T PLN00414 392 LRDTVKSVMD-KDSEIGNLVKRNHKKL 417 (446)
T ss_pred HHHHHHHHhc-CChhhHHHHHHHHHHH
Confidence 9999999997 64 4455566666544
|
|
| >PLN02167 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.096 Score=52.11 Aligned_cols=79 Identities=16% Similarity=0.052 Sum_probs=50.0
Q ss_pred CcEEEccCCChhHHHHHHhcCc--EEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCc---c-ceecccCCccceeec--
Q 012436 336 GNVEFYKNLLYRDLVKLLGGAV--VGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPK---M-DIVLEEDGQQTGFLA-- 407 (464)
Q Consensus 336 ~~v~~~g~~~~~~~~~~l~~ad--~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~---~-~~v~~~~~~~~g~~~-- 407 (464)
++..+.+++|+.++ ++... .||. +-|+ ++++||+++|+|+|+-...+.- . .++.. -+.|+..
T Consensus 340 ~rg~v~~w~PQ~~i---L~h~~vg~fvt---H~G~-nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~---~g~g~~~~~ 409 (475)
T PLN02167 340 GRGLVCGWAPQVEI---LAHKAIGGFVS---HCGW-NSVLESLWFGVPIATWPMYAEQQLNAFTMVKE---LGLAVELRL 409 (475)
T ss_pred cCeeeeccCCHHHH---hcCcccCeEEe---eCCc-ccHHHHHHcCCCEEeccccccchhhHHHHHHH---hCeeEEeec
Confidence 34567799988764 65544 4552 2333 4899999999999996544220 1 11222 2344322
Q ss_pred --------C-CHHHHHHHHHHHHcCCH
Q 012436 408 --------Q-NAEEYADAIVKIISMPE 425 (464)
Q Consensus 408 --------~-~~~~la~~i~~l~~~~~ 425 (464)
. +.++++++|++++. ++
T Consensus 410 ~~~~~~~~~~~~~~l~~av~~~m~-~~ 435 (475)
T PLN02167 410 DYVSAYGEIVKADEIAGAVRSLMD-GE 435 (475)
T ss_pred ccccccCCcccHHHHHHHHHHHhc-CC
Confidence 1 78899999999997 54
|
|
| >PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.13 Score=51.12 Aligned_cols=77 Identities=17% Similarity=0.081 Sum_probs=49.4
Q ss_pred CcEEEccCCChhHHHHHHhc--CcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCc---cce-ecccCCccceeec--
Q 012436 336 GNVEFYKNLLYRDLVKLLGG--AVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPK---MDI-VLEEDGQQTGFLA-- 407 (464)
Q Consensus 336 ~~v~~~g~~~~~~~~~~l~~--ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~---~~~-v~~~~~~~~g~~~-- 407 (464)
.++.+.+++|+.++ |+. +++||. +-| -.+++||+++|+|+|+-...+.- ... ++. -+.|...
T Consensus 343 ~g~~v~~w~PQ~~v---L~h~~v~~fvt---H~G-~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~---~gvG~~~~~ 412 (477)
T PLN02863 343 RGLVIRGWAPQVAI---LSHRAVGAFLT---HCG-WNSVLEGLVAGVPMLAWPMAADQFVNASLLVDE---LKVAVRVCE 412 (477)
T ss_pred CCEEecCCCCHHHH---hcCCCcCeEEe---cCC-chHHHHHHHcCCCEEeCCccccchhhHHHHHHh---hceeEEecc
Confidence 46888899987654 665 455552 233 45899999999999996544221 111 122 2444433
Q ss_pred -----CCHHHHHHHHHHHHc
Q 012436 408 -----QNAEEYADAIVKIIS 422 (464)
Q Consensus 408 -----~~~~~la~~i~~l~~ 422 (464)
-+.+++++++.+++.
T Consensus 413 ~~~~~~~~~~v~~~v~~~m~ 432 (477)
T PLN02863 413 GADTVPDSDELARVFMESVS 432 (477)
T ss_pred CCCCCcCHHHHHHHHHHHhh
Confidence 167899999998873
|
|
| >PLN00164 glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.16 Score=50.56 Aligned_cols=93 Identities=15% Similarity=0.065 Sum_probs=56.9
Q ss_pred cEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCc---cc-eecccCCccceeecC----
Q 012436 337 NVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPK---MD-IVLEEDGQQTGFLAQ---- 408 (464)
Q Consensus 337 ~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~---~~-~v~~~~~~~~g~~~~---- 408 (464)
.+.+.+++|+.++ |+..++..+- ++-| -.+++||+++|+|+|+-..-+.- .. ++.. -+.|+..+
T Consensus 340 g~~v~~w~PQ~~i---L~h~~vg~fv-tH~G-wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~---~gvG~~~~~~~~ 411 (480)
T PLN00164 340 GLVWPTWAPQKEI---LAHAAVGGFV-THCG-WNSVLESLWHGVPMAPWPLYAEQHLNAFELVAD---MGVAVAMKVDRK 411 (480)
T ss_pred CeEEeecCCHHHH---hcCcccCeEE-eecc-cchHHHHHHcCCCEEeCCccccchhHHHHHHHH---hCeEEEeccccc
Confidence 4677799987765 6666653332 2233 34899999999999996543220 11 1222 24454331
Q ss_pred -----CHHHHHHHHHHHHcCCHH-HHHHHHHHHHHH
Q 012436 409 -----NAEEYADAIVKIISMPET-ERLEMAAAARRR 438 (464)
Q Consensus 409 -----~~~~la~~i~~l~~~~~~-~~~~~~~~~~~~ 438 (464)
+.++++++|.+++. +++ +.+++.+++++.
T Consensus 412 ~~~~~~~e~l~~av~~vm~-~~~~~~~~~r~~a~~~ 446 (480)
T PLN00164 412 RDNFVEAAELERAVRSLMG-GGEEEGRKAREKAAEM 446 (480)
T ss_pred cCCcCcHHHHHHHHHHHhc-CCchhHHHHHHHHHHH
Confidence 57899999999997 653 244455544433
|
|
| >PLN02208 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.22 Score=48.94 Aligned_cols=203 Identities=7% Similarity=-0.074 Sum_probs=104.2
Q ss_pred HhhcCCEEEEcCHHHHH-HHHHHhCC--CCCeEEecCCCC-CCCCccCC-------CCCCCCCcEEEEEeccCCCCChHH
Q 012436 218 VGSCADLAMVNSSWTQS-HIEKLWGI--PDRIKRVYPPCD-TSGLQVLP-------LERSTEYPAIISVAQFRPEKAHPL 286 (464)
Q Consensus 218 ~~~~ad~vi~~S~~~~~-~~~~~~~~--~~~i~~i~~~~d-~~~~~~~~-------~~~~~~~~~i~~~G~~~~~K~~~~ 286 (464)
.+..+|.|+++|=...+ .+.+.+.. ..++..|.+-.. .+.-...+ ....++..+++.+|+.... ..+.
T Consensus 190 ~~~~~~~vl~Ntf~eLE~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~wLd~~~~~sVvyvSfGS~~~l-~~~q 268 (442)
T PLN02208 190 GLKSCDVIALRTCKEIEGKFCDYISRQYHKKVLLTGPMFPEPDTSKPLEEQWSHFLSGFPPKSVVFCSLGSQIIL-EKDQ 268 (442)
T ss_pred hhccCCEEEEECHHHHHHHHHHHHHhhcCCCEEEEeecccCcCCCCCCHHHHHHHHhcCCCCcEEEEeccccccC-CHHH
Confidence 45689999998865432 23333321 235554443221 11000000 0112345667777876531 3344
Q ss_pred HHHHHHHHHHHhcCCCCCcEEEEEcC-CCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHHHhcCcEEEEcCCC
Q 012436 287 QLEAFSVALRKLDADLPRPRLQFVGS-CRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMID 365 (464)
Q Consensus 287 ll~a~~~l~~~~~~~~p~~~l~i~G~-~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~ 365 (464)
+.+.+..+..... ++.+++--. +.........+.+++..+ ..++.+.+++|+.++ |+...+..+-+
T Consensus 269 ~~e~~~~l~~s~~----pf~wv~r~~~~~~~~~~~lp~~f~~r~~----~~g~~v~~W~PQ~~i---L~H~~v~~Fvt-- 335 (442)
T PLN02208 269 FQELCLGMELTGL----PFLIAVKPPRGSSTVQEGLPEGFEERVK----GRGVVWGGWVQQPLI---LDHPSIGCFVN-- 335 (442)
T ss_pred HHHHHHHHHhCCC----cEEEEEeCCCcccchhhhCCHHHHHHHh----cCCcEeeccCCHHHH---hcCCccCeEEc--
Confidence 5565555422221 444444311 110000111223333333 247788899988775 66666544332
Q ss_pred CCCChHHHHHHHhCCcEEEeCCCCCc---cc-eecccCCccceeecC-------CHHHHHHHHHHHHcCCH-HHHHHHHH
Q 012436 366 EHFGISVVEYMAAGAIPIAHNSAGPK---MD-IVLEEDGQQTGFLAQ-------NAEEYADAIVKIISMPE-TERLEMAA 433 (464)
Q Consensus 366 e~~~~~~~Ea~a~G~PvI~~~~~~~~---~~-~v~~~~~~~~g~~~~-------~~~~la~~i~~l~~~~~-~~~~~~~~ 433 (464)
.+.-++++||+++|+|+|+-..-+.- .. ++.. -+.|...+ +.+++.++|+++++ ++ +..+++.+
T Consensus 336 HcG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~---~g~gv~~~~~~~~~~~~~~l~~ai~~~m~-~~~e~g~~~r~ 411 (442)
T PLN02208 336 HCGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEE---FEVSVEVSREKTGWFSKESLSNAIKSVMD-KDSDLGKLVRS 411 (442)
T ss_pred cCCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHH---hceeEEeccccCCcCcHHHHHHHHHHHhc-CCchhHHHHHH
Confidence 23345899999999999997644220 11 1221 23444431 67899999999997 65 34555666
Q ss_pred HHHHH
Q 012436 434 AARRR 438 (464)
Q Consensus 434 ~~~~~ 438 (464)
++++.
T Consensus 412 ~~~~~ 416 (442)
T PLN02208 412 NHTKL 416 (442)
T ss_pred HHHHH
Confidence 55543
|
|
| >PRK14986 glycogen phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.051 Score=56.18 Aligned_cols=148 Identities=14% Similarity=0.148 Sum_probs=101.2
Q ss_pred CCCcEEEEEeccCCCCChHH-HHHHHHHHHHHhcC---CCCCcEEEEEcCCCCCc--cHHHHHHHHHHHH----hcCCCC
Q 012436 267 TEYPAIISVAQFRPEKAHPL-QLEAFSVALRKLDA---DLPRPRLQFVGSCRNKS--DEERLQSLKDKSI----ELKVDG 336 (464)
Q Consensus 267 ~~~~~i~~~G~~~~~K~~~~-ll~a~~~l~~~~~~---~~p~~~l~i~G~~~~~~--~~~~~~~l~~~~~----~~~l~~ 336 (464)
++...++++-|+...|...+ ++..+..+.+-..+ ...+.++++.|...... .....+.+-+.++ +-.+.+
T Consensus 541 p~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~v~~ 620 (815)
T PRK14986 541 PKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYYMAKHIIHLINDVAKVINNDPQIGD 620 (815)
T ss_pred cccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhccChhhcC
Confidence 45678899999999998887 65554444332211 11257888888743322 1122333333333 112233
Q ss_pred --cEEEccCCChhHHHHHHhcCcEEEEcCC--CCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC-CHH
Q 012436 337 --NVEFYKNLLYRDLVKLLGGAVVGIHSMI--DEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ-NAE 411 (464)
Q Consensus 337 --~v~~~g~~~~~~~~~~l~~ad~~v~ps~--~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~-~~~ 411 (464)
+|.|+....-.-...++.+||+-...|. .|..|++-+-+|..|.+.+++--|.. .|+.+ +.+++|||++. +.+
T Consensus 621 ~lkVVFlenY~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~n-vEi~e-~vG~eN~~~fG~~~~ 698 (815)
T PRK14986 621 KLKVVFIPNYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGAN-VEMLE-HVGEENIFIFGNTAE 698 (815)
T ss_pred ceeEEEeCCCCHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCch-hHHHH-hcCCCcEEEeCCCHH
Confidence 6899988877888889999999888764 89999999999999999999987766 56654 23358999997 777
Q ss_pred HHHHH
Q 012436 412 EYADA 416 (464)
Q Consensus 412 ~la~~ 416 (464)
++.+.
T Consensus 699 ev~~~ 703 (815)
T PRK14986 699 EVEAL 703 (815)
T ss_pred HHHHH
Confidence 66654
|
|
| >PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.62 Score=42.39 Aligned_cols=160 Identities=19% Similarity=0.128 Sum_probs=85.2
Q ss_pred HHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCCCCCCC--CCcEEEEEecc---CCCCChHHHH
Q 012436 214 MYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERST--EYPAIISVAQF---RPEKAHPLQL 288 (464)
Q Consensus 214 ~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~~~~~~--~~~~i~~~G~~---~~~K~~~~ll 288 (464)
..+.+++.++.+.+=.+...+.+.+. +.+.++.++|-++- ........... .......+... ....-.+.+.
T Consensus 120 ~~~~~l~~~~~i~vRD~~S~~~l~~~-g~~~~~~~~~D~af--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (286)
T PF04230_consen 120 LLRRILSKADYISVRDEYSYELLKKL-GISGNVKLVPDPAF--LLPPSYPDEDKSKPKRNYISVSNSPSRNNEEYIEEIA 196 (286)
T ss_pred HHHHHHhCCCEEEECCHHHHHHHHHc-CCCCCcEEEeCchh--hcCcccccccccccccceeeeccccchhhhhHHHHHH
Confidence 34666788999999888888866554 54337777775542 11110111111 01222222222 2233445556
Q ss_pred HHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCC
Q 012436 289 EAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHF 368 (464)
Q Consensus 289 ~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~ 368 (464)
+.+..+.+.. ..+.+..................... ..............+.+++.++++++|++|....+
T Consensus 197 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Is~RlH--- 267 (286)
T PF04230_consen 197 ELIQRLLDKG----YKIVLLPFSPSDDDEDDDDFNEIDIK--AEKFFNVIIIDYSLSPDELLELISQADLVISMRLH--- 267 (286)
T ss_pred HHHHHhhccc----ceeEEEEeeeccchhhHHHHHhhhhh--cccccceeEecCCCCHHHHHHHHhcCCEEEecCCH---
Confidence 6666665532 13444444433322111111111100 11122344555667889999999999999966433
Q ss_pred ChHHHHHHHhCCcEEEeCC
Q 012436 369 GISVVEYMAAGAIPIAHNS 387 (464)
Q Consensus 369 ~~~~~Ea~a~G~PvI~~~~ 387 (464)
..+=|+++|+|+|+-+.
T Consensus 268 --~~I~a~~~g~P~i~i~y 284 (286)
T PF04230_consen 268 --GAILALSLGVPVIAISY 284 (286)
T ss_pred --HHHHHHHcCCCEEEEec
Confidence 35669999999998653
|
CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ]. |
| >PLN02207 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.15 Score=50.40 Aligned_cols=80 Identities=19% Similarity=0.068 Sum_probs=49.8
Q ss_pred CCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCc---cc-eecccCCccceeec---
Q 012436 335 DGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPK---MD-IVLEEDGQQTGFLA--- 407 (464)
Q Consensus 335 ~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~---~~-~v~~~~~~~~g~~~--- 407 (464)
.++..+.+++|+.++ ++...+..+- ++-| -++++||+.+|+|+|+-...+.- .. ++.. -+.|+-+
T Consensus 331 ~~~g~i~~W~PQ~~I---L~H~~vg~Fv-TH~G-wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~---~gvGv~~~~~ 402 (468)
T PLN02207 331 SGRGMICGWSPQVEI---LAHKAVGGFV-SHCG-WNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKE---LKLAVELKLD 402 (468)
T ss_pred CCCeEEEEeCCHHHH---hcccccceee-ecCc-cccHHHHHHcCCCEEecCccccchhhHHHHHHH---hCceEEEecc
Confidence 456777899988876 4544442222 2223 34889999999999997644320 11 1221 2344311
Q ss_pred ------C--CHHHHHHHHHHHHc
Q 012436 408 ------Q--NAEEYADAIVKIIS 422 (464)
Q Consensus 408 ------~--~~~~la~~i~~l~~ 422 (464)
+ +.+++.++|++++.
T Consensus 403 ~~~~~~~~v~~e~i~~av~~vm~ 425 (468)
T PLN02207 403 YRVHSDEIVNANEIETAIRCVMN 425 (468)
T ss_pred cccccCCcccHHHHHHHHHHHHh
Confidence 1 77899999999985
|
|
| >TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.041 Score=56.70 Aligned_cols=147 Identities=16% Similarity=0.115 Sum_probs=100.7
Q ss_pred CCCcEEEEEeccCCCCChHH-HHHHHHH---HHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcC--------C
Q 012436 267 TEYPAIISVAQFRPEKAHPL-QLEAFSV---ALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELK--------V 334 (464)
Q Consensus 267 ~~~~~i~~~G~~~~~K~~~~-ll~a~~~---l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~--------l 334 (464)
++....+++-|+...|...+ ++..+.. ++.....+..+.++++.|...... ...+.+.+++.... +
T Consensus 525 p~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y--~~aK~iIklI~~va~~iN~Dp~v 602 (794)
T TIGR02093 525 PNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGY--HMAKLIIKLINSVAEVVNNDPAV 602 (794)
T ss_pred ccccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCc--HHHHHHHHHHHHHHHHhccChhh
Confidence 45577888899999998887 5555444 443311111255888888743322 12233444433332 3
Q ss_pred CC--cEEEccCCChhHHHHHHhcCcEEEEcC--CCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC-C
Q 012436 335 DG--NVEFYKNLLYRDLVKLLGGAVVGIHSM--IDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ-N 409 (464)
Q Consensus 335 ~~--~v~~~g~~~~~~~~~~l~~ad~~v~ps--~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~-~ 409 (464)
.+ +|.|+....-.-...++.+||+-...| ..|..|++-+-+|..|.+.|+|--|.. .|+.+ +.+++|+|++. +
T Consensus 603 ~~~lkVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGan-vEi~e-~vG~eN~fiFG~~ 680 (794)
T TIGR02093 603 GDKLKVVFVPNYNVSLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGAN-VEIRE-EVGAENIFIFGLT 680 (794)
T ss_pred CCceeEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchh-HHHHH-HhCcccEEEcCCC
Confidence 34 689998887788888999999988776 489999999999999999999977766 56643 23457899997 7
Q ss_pred HHHHHHHH
Q 012436 410 AEEYADAI 417 (464)
Q Consensus 410 ~~~la~~i 417 (464)
.+++.+.-
T Consensus 681 ~~ev~~~~ 688 (794)
T TIGR02093 681 VEEVEALR 688 (794)
T ss_pred HHHHHHHH
Confidence 77766543
|
This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources. |
| >PLN02152 indole-3-acetate beta-glucosyltransferase | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.16 Score=49.92 Aligned_cols=84 Identities=13% Similarity=0.047 Sum_probs=53.1
Q ss_pred CCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCc---cceecccCCccceeec----
Q 012436 335 DGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPK---MDIVLEEDGQQTGFLA---- 407 (464)
Q Consensus 335 ~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~---~~~v~~~~~~~~g~~~---- 407 (464)
.++..+.+++|+.+ +|+..++..+-+ .+..++++||+.+|+|+|+-...+-- ...+.+. -+.|+-.
T Consensus 326 ~~~g~v~~W~PQ~~---iL~h~~vg~fvt--H~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~--~~~G~~~~~~~ 398 (455)
T PLN02152 326 EEVGMIVSWCSQIE---VLRHRAVGCFVT--HCGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEI--WKTGVRVRENS 398 (455)
T ss_pred cCCeEEEeeCCHHH---HhCCcccceEEe--eCCcccHHHHHHcCCCEEeccccccchHHHHHHHHH--hCceEEeecCc
Confidence 45777789998766 477777644332 23345899999999999997644320 1111110 0133322
Q ss_pred -C--CHHHHHHHHHHHHcCCHH
Q 012436 408 -Q--NAEEYADAIVKIISMPET 426 (464)
Q Consensus 408 -~--~~~~la~~i~~l~~~~~~ 426 (464)
+ +.++++++++++++ ++.
T Consensus 399 ~~~~~~e~l~~av~~vm~-~~~ 419 (455)
T PLN02152 399 EGLVERGEIRRCLEAVME-EKS 419 (455)
T ss_pred CCcCcHHHHHHHHHHHHh-hhH
Confidence 1 68899999999997 653
|
|
| >PLN02992 coniferyl-alcohol glucosyltransferase | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.18 Score=49.99 Aligned_cols=81 Identities=14% Similarity=0.038 Sum_probs=53.1
Q ss_pred CcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCc---ccee-cccCCccceeec----
Q 012436 336 GNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPK---MDIV-LEEDGQQTGFLA---- 407 (464)
Q Consensus 336 ~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~---~~~v-~~~~~~~~g~~~---- 407 (464)
.++.+.+++|+.++ ++...+..+-+ .+.-++++||+.+|+|+|+-...+.- ...+ .. -+.|...
T Consensus 338 rg~vv~~W~PQ~~i---L~h~~vg~Fit--H~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~---~g~gv~~~~~~ 409 (481)
T PLN02992 338 RGFVVPSWAPQAEI---LAHQAVGGFLT--HCGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDE---LGIAVRSDDPK 409 (481)
T ss_pred CCEEEeecCCHHHH---hCCcccCeeEe--cCchhHHHHHHHcCCCEEecCccchhHHHHHHHHHH---hCeeEEecCCC
Confidence 36888999988775 66666532221 23345899999999999997654320 1122 22 2445433
Q ss_pred C--CHHHHHHHHHHHHcCCH
Q 012436 408 Q--NAEEYADAIVKIISMPE 425 (464)
Q Consensus 408 ~--~~~~la~~i~~l~~~~~ 425 (464)
+ +.++++++|.+++. ++
T Consensus 410 ~~~~~~~l~~av~~vm~-~~ 428 (481)
T PLN02992 410 EVISRSKIEALVRKVMV-EE 428 (481)
T ss_pred CcccHHHHHHHHHHHhc-CC
Confidence 1 78899999999997 63
|
|
| >PLN02173 UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.3 Score=48.00 Aligned_cols=94 Identities=16% Similarity=0.099 Sum_probs=58.2
Q ss_pred CCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCc---cceecccCCccceeecC---
Q 012436 335 DGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPK---MDIVLEEDGQQTGFLAQ--- 408 (464)
Q Consensus 335 ~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~---~~~v~~~~~~~~g~~~~--- 408 (464)
.+++.+.+++|+.+ +|+...+..+-+ .+..++++||+++|+|+|+-...+.- ...+.+. -+.|+-+.
T Consensus 316 ~~~~~i~~W~PQ~~---iL~H~~v~~Fvt--HcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~--~g~Gv~v~~~~ 388 (449)
T PLN02173 316 KDKSLVLKWSPQLQ---VLSNKAIGCFMT--HCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDV--WKVGVRVKAEK 388 (449)
T ss_pred CCceEEeCCCCHHH---HhCCCccceEEe--cCccchHHHHHHcCCCEEecCchhcchHHHHHHHHH--hCceEEEeecc
Confidence 35788889998766 467766443332 23456899999999999997644320 1122220 03443321
Q ss_pred -----CHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 012436 409 -----NAEEYADAIVKIISMPETERLEMAAAARR 437 (464)
Q Consensus 409 -----~~~~la~~i~~l~~~~~~~~~~~~~~~~~ 437 (464)
+.+++++++++++. +++ .+++.+++++
T Consensus 389 ~~~~~~~e~v~~av~~vm~-~~~-~~~~r~~a~~ 420 (449)
T PLN02173 389 ESGIAKREEIEFSIKEVME-GEK-SKEMKENAGK 420 (449)
T ss_pred cCCcccHHHHHHHHHHHhc-CCh-HHHHHHHHHH
Confidence 67999999999997 643 2444444443
|
|
| >cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.078 Score=54.91 Aligned_cols=148 Identities=18% Similarity=0.155 Sum_probs=99.6
Q ss_pred CCCcEEEEEeccCCCCChHH-HHHHH---HHHHHHhcCCCCCcEEEEEcCCCCCcc--HHHHHHHHHHHHh----cCCCC
Q 012436 267 TEYPAIISVAQFRPEKAHPL-QLEAF---SVALRKLDADLPRPRLQFVGSCRNKSD--EERLQSLKDKSIE----LKVDG 336 (464)
Q Consensus 267 ~~~~~i~~~G~~~~~K~~~~-ll~a~---~~l~~~~~~~~p~~~l~i~G~~~~~~~--~~~~~~l~~~~~~----~~l~~ 336 (464)
++....+++-|+...|...+ ++..+ .+++........+.++++.|....... ....+.+...++. -.+.+
T Consensus 528 p~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~~ 607 (797)
T cd04300 528 PDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGYYMAKLIIKLINAVADVVNNDPDVGD 607 (797)
T ss_pred CCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHhccChhcCC
Confidence 56678899999999998888 55554 445443110112477888887433211 1122222233321 11333
Q ss_pred --cEEEccCCChhHHHHHHhcCcEEEEcC--CCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC-CHH
Q 012436 337 --NVEFYKNLLYRDLVKLLGGAVVGIHSM--IDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ-NAE 411 (464)
Q Consensus 337 --~v~~~g~~~~~~~~~~l~~ad~~v~ps--~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~-~~~ 411 (464)
+|.|+....-.-...++.+||+-...| ..|..|++-+-+|..|.+.++|--|.. .|+.+ +.+++|+|++. +.+
T Consensus 608 ~lkVVFlenY~VslAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtlDGan-vEi~e-~vG~eN~fiFG~~~~ 685 (797)
T cd04300 608 KLKVVFLPNYNVSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGAN-VEIAE-EVGEENIFIFGLTAE 685 (797)
T ss_pred ceEEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeecccchh-HHHHH-HhCcCcEEEeCCCHH
Confidence 689998887788888999999988776 489999999999999999999977766 56543 23457899997 766
Q ss_pred HHHHH
Q 012436 412 EYADA 416 (464)
Q Consensus 412 ~la~~ 416 (464)
++.+.
T Consensus 686 ev~~~ 690 (797)
T cd04300 686 EVEAL 690 (797)
T ss_pred HHHHH
Confidence 66544
|
It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [] | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.15 Score=42.68 Aligned_cols=111 Identities=14% Similarity=0.125 Sum_probs=56.2
Q ss_pred CCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeecccccccccCcceehhhhchh
Q 012436 48 GGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFG 127 (464)
Q Consensus 48 GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (464)
||.-..+..|.+.+.....+.+..+++.....+.. ...+..+...... .+...+..... ..+.+......+.
T Consensus 8 GGHt~eml~L~~~~~~~~~~~~~~ivt~~d~~S~~-k~~~~~~~~~~~~----~~~~~~r~r~v---~q~~~~~~~~~l~ 79 (170)
T PF08660_consen 8 GGHTAEMLRLLKALDNDRYQPRTYIVTEGDKQSRS-KAEQLEKSSSKRH----KILEIPRAREV---GQSYLTSIFTTLR 79 (170)
T ss_pred cHHHHHHHHHHHHhhhhcCCCcEEEEEcCCcccHH-HHHHHHHhccccc----eeeccceEEEe---chhhHhhHHHHHH
Confidence 68999999999999444444555555543322221 1122222111100 11111111111 0112223344455
Q ss_pred hhHHHHHHhhhcCCcEEEecccccccch--hhhcc------CceEEE
Q 012436 128 SVYLSWEALCKFTPLYYFDTSGYAFTYP--LARIF------GCRVIC 166 (464)
Q Consensus 128 ~~~~~~~~l~~~~~Dvv~~~~~~~~~~~--~~~~~------~~p~v~ 166 (464)
+...+...+.+.+||+|+++........ +++.. +.++|+
T Consensus 80 ~~~~~~~il~r~rPdvii~nGpg~~vp~~~~~~l~~~~~~~~~kiIy 126 (170)
T PF08660_consen 80 AFLQSLRILRRERPDVIISNGPGTCVPVCLAAKLLRLLGLRGSKIIY 126 (170)
T ss_pred HHHHHHHHHHHhCCCEEEEcCCceeeHHHHHHHHHHHhhccCCcEEE
Confidence 6667777788889999996655443322 45556 777776
|
|
| >PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2 | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.039 Score=53.24 Aligned_cols=162 Identities=14% Similarity=0.057 Sum_probs=74.2
Q ss_pred CCCcchhhHHHHHHhhhh--------CCC--CceEEEcccC-CCCchhHHHHHHhhcCcccCCCceeeeeeccc------
Q 012436 47 GGGGERVLWCAVKAIQEE--------SPD--LDCIVYTGDH-DAFPDSLLARAVDRFGVELLHPPKVVHLYRRK------ 109 (464)
Q Consensus 47 ~GG~~~~~~~l~~~L~~~--------g~~--~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 109 (464)
.||.-.++.+++++|.+. |-+ ..|.++|.-. +.....+.+.... +.-..+..+.+++.+.
T Consensus 295 TGGQVvYVleqarALe~e~~~ri~~~gl~i~p~i~i~TRlIpd~~~t~~~q~le~---~~gt~~a~IlRvPF~~~~gi~~ 371 (550)
T PF00862_consen 295 TGGQVVYVLEQARALENEMLYRIKLQGLDITPKIDIVTRLIPDAKGTTCNQRLEK---VSGTENARILRVPFGPEKGILR 371 (550)
T ss_dssp SSHHHHHHHHHHHHHHHHTHHHHHHTT-----EEEEEEE--TBTTCGGGTSSEEE---ETTESSEEEEEE-ESESTEEE-
T ss_pred CCCcEEEEeHHHHHHHHHHHHHHHhcCCCCCCceeeecccccCCcCCCccccccc---cCCCCCcEEEEecCCCCcchhh
Confidence 389999999999999764 322 3466666532 1111222111111 1111233566666543
Q ss_pred -ccc-cccCcceehhhhchhhhHHHHHH-hh--hcCCcEEEecccccccch--hhhccCceEEEEeeCCcchhhhhhccc
Q 012436 110 -WIE-ESTYPRFTMIGQSFGSVYLSWEA-LC--KFTPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTISLDMISRVR 182 (464)
Q Consensus 110 -~~~-~~~~~~~~~~~~~~~~~~~~~~~-l~--~~~~Dvv~~~~~~~~~~~--~~~~~~~p~v~~~h~p~~~~~~~~~~~ 182 (464)
|+. ...||.+. .....+.+. .. ...||+||.+.+.+.... ++...|+|...+-|.-.. ..+..
T Consensus 372 kwisrf~lWPyLe------~fa~d~~~~i~~e~~~~PdlI~GnYsDgnlvA~LLs~~lgv~~~~iaHsLek----~Ky~~ 441 (550)
T PF00862_consen 372 KWISRFDLWPYLE------EFADDAEREILAELQGKPDLIIGNYSDGNLVASLLSRKLGVTQCFIAHSLEK----TKYED 441 (550)
T ss_dssp S---GGG-GGGHH------HHHHHHHHHHHHHHTS--SEEEEEHHHHHHHHHHHHHHHT-EEEEE-SS-HH----HHHHT
T ss_pred hccchhhchhhHH------HHHHHHHHHHHHHhCCCCcEEEeccCcchHHHHHHHhhcCCceehhhhcccc----ccccc
Confidence 221 12333221 111222222 22 357999998777666544 777999999999993221 00000
Q ss_pred ccccccCCCcccccchhhhHHHHHHHHHHH-HHHHHHhhcCCEEEEcCHHHHH
Q 012436 183 EGSSMYNNNASIAQSNWLSQCKIVYYTFFS-WMYGLVGSCADLAMVNSSWTQS 234 (464)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ad~vi~~S~~~~~ 234 (464)
.. ..+......|....+ ..+..+++.||.||+.+.....
T Consensus 442 --s~-----------~~w~e~e~~Yhfs~qftAd~iamn~adfIItST~QEI~ 481 (550)
T PF00862_consen 442 --SD-----------LYWKEIEEKYHFSCQFTADLIAMNAADFIITSTYQEIA 481 (550)
T ss_dssp --TT-----------TTSHHHHHHH-HHHHHHHHHHHHHHSSEEEESSHHHHH
T ss_pred --cC-----------CCHHHHHhhccchhhhhHHHHHhhcCCEEEEcchHhhc
Confidence 00 011112222221111 2356778999999998765543
|
4.1.13 from EC in the following reaction: |
| >PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E | Back alignment and domain information |
|---|
Probab=95.82 E-value=1.3 Score=39.53 Aligned_cols=138 Identities=11% Similarity=0.146 Sum_probs=74.7
Q ss_pred EEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHH----------HHHhcCCC--CcEEE
Q 012436 273 ISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKD----------KSIELKVD--GNVEF 340 (464)
Q Consensus 273 ~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~----------~~~~~~l~--~~v~~ 340 (464)
+|+||....||+..+++..+...+. +++.-++-|-.... ....-+.. .+.+..+. .-+.+
T Consensus 187 ~yigR~Tt~kG~~~mfD~h~~~lK~-----~~~~t~~~GierS~---A~~~i~d~~~~~~y~~~~~~~~~~~~pN~~~~v 258 (355)
T PF11440_consen 187 RYIGRQTTWKGPRRMFDLHEKILKP-----AGFKTIMEGIERSP---AKISIKDHGIPYEYYPKLDCDEPKPAPNSPVPV 258 (355)
T ss_dssp EEE--SSGGG-HHHHHHHHHHTTTT-----TT-EEEEE---SST---HHHHHHHTT--EEEE-CTGGGG---SSS--EEE
T ss_pred eeeeeeeeecCcHHHhhhHHHhcCC-----cchhHHhhhhhcCC---ceeeeecCCcccccCccccccCcccCCCCccee
Confidence 8999999999999999999886554 47888888854332 23222222 01111122 23677
Q ss_pred ccCCChhHHHHHHhcCcEEEEcCC------CCCCChHHHHHHHhCCcEEE-eCCCCCc------cceecccCCccce-ee
Q 012436 341 YKNLLYRDLVKLLGGAVVGIHSMI------DEHFGISVVEYMAAGAIPIA-HNSAGPK------MDIVLEEDGQQTG-FL 406 (464)
Q Consensus 341 ~g~~~~~~~~~~l~~ad~~v~ps~------~e~~~~~~~Ea~a~G~PvI~-~~~~~~~------~~~v~~~~~~~~g-~~ 406 (464)
+|..=.+|..+.|+.+-+...-+. .+..-.+-+|..|||+-.|- ...|... ..++.. ..| +.
T Consensus 259 ~~~Yi~~E~~~~Maks~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~D~~~~~~~----~~~~I~ 334 (355)
T PF11440_consen 259 YGPYIRSEGLERMAKSLFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTLDGTRYIDH----PYSAIY 334 (355)
T ss_dssp ESS--HHHHHHHHHTEEEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TTTSSBGGSS------S-EE
T ss_pred cchhhhHHHHHHHhhccceeecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccceeeecCceeecc----CcceeE
Confidence 888888999999999988766542 33466778999999995543 3333110 112222 333 33
Q ss_pred cC--CHHHHHHHHHHHHc
Q 012436 407 AQ--NAEEYADAIVKIIS 422 (464)
Q Consensus 407 ~~--~~~~la~~i~~l~~ 422 (464)
++ |.++-.+.|.++.+
T Consensus 335 ~De~dle~T~ekl~E~a~ 352 (355)
T PF11440_consen 335 FDENDLESTVEKLIEVAN 352 (355)
T ss_dssp E-TTSHHHHHHHHHHHHT
T ss_pred eccchHHHHHHHHHHHhc
Confidence 33 77777777777765
|
coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B. |
| >PRK14985 maltodextrin phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.11 Score=53.51 Aligned_cols=145 Identities=12% Similarity=0.090 Sum_probs=96.4
Q ss_pred CCCcEEEEEeccCCCCChHH-HHHHHHHHHHHhcC---CCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcC--------C
Q 012436 267 TEYPAIISVAQFRPEKAHPL-QLEAFSVALRKLDA---DLPRPRLQFVGSCRNKSDEERLQSLKDKSIELK--------V 334 (464)
Q Consensus 267 ~~~~~i~~~G~~~~~K~~~~-ll~a~~~l~~~~~~---~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~--------l 334 (464)
++...++++-|+...|...+ ++..+..+.+-..+ +..+.++++.|...... ..-+.+.+++.... +
T Consensus 527 p~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y--~~aK~iIklI~~va~~in~Dp~v 604 (798)
T PRK14985 527 PQAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGY--YLAKNIIFAINKVAEVINNDPLV 604 (798)
T ss_pred chhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCc--HHHHHHHHHHHHHHHHhcCChhh
Confidence 45567888889999998877 65555444332221 11247888888753321 11233333332221 2
Q ss_pred CC--cEEEccCCChhHHHHHHhcCcEEEEcC--CCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC-C
Q 012436 335 DG--NVEFYKNLLYRDLVKLLGGAVVGIHSM--IDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ-N 409 (464)
Q Consensus 335 ~~--~v~~~g~~~~~~~~~~l~~ad~~v~ps--~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~-~ 409 (464)
.+ +|.|+....-.-...++.+||+-...| ..|..|++-+-+|..|.+.++|--|.. -|+.+ +.+++|||++. +
T Consensus 605 ~~~lkVVFlenY~VslAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGan-vEi~e-~vG~eN~f~fG~~ 682 (798)
T PRK14985 605 GDKLKVVFLPDYCVSAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGAN-VEIAE-QVGEENIFIFGHT 682 (798)
T ss_pred CCceeEEEeCCCChHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccchH-HHHHH-HhCcCcEEEeCCC
Confidence 23 689998887788888999999988776 489999999999999999999877765 46554 23347888886 5
Q ss_pred HHHHHH
Q 012436 410 AEEYAD 415 (464)
Q Consensus 410 ~~~la~ 415 (464)
.+++.+
T Consensus 683 ~~ev~~ 688 (798)
T PRK14985 683 VEQVKA 688 (798)
T ss_pred HHHHHH
Confidence 555443
|
|
| >PLN02555 limonoid glucosyltransferase | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.43 Score=47.35 Aligned_cols=94 Identities=13% Similarity=0.100 Sum_probs=57.7
Q ss_pred CCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCc---cceecccCCc-cceeec---
Q 012436 335 DGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPK---MDIVLEEDGQ-QTGFLA--- 407 (464)
Q Consensus 335 ~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~---~~~v~~~~~~-~~g~~~--- 407 (464)
.+++.+.+++|+.++..- .++.+||. +-| -.+++||+.+|+|+|+-..-+.- ...+.+ . +.|+..
T Consensus 336 ~~~g~v~~W~PQ~~iL~H-~~v~~Fvt---H~G-~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~---~~gvGv~l~~~ 407 (480)
T PLN02555 336 GDKGKIVQWCPQEKVLAH-PSVACFVT---HCG-WNSTMEALSSGVPVVCFPQWGDQVTDAVYLVD---VFKTGVRLCRG 407 (480)
T ss_pred CCceEEEecCCHHHHhCC-CccCeEEe---cCC-cchHHHHHHcCCCEEeCCCccccHHHHHHHHH---HhCceEEccCC
Confidence 457888899988664321 44555662 233 45899999999999997644310 111222 2 445433
Q ss_pred -----C-CHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012436 408 -----Q-NAEEYADAIVKIISMPETERLEMAAAARRR 438 (464)
Q Consensus 408 -----~-~~~~la~~i~~l~~~~~~~~~~~~~~~~~~ 438 (464)
. +.+++.++|++++. ++ +-+++++++++.
T Consensus 408 ~~~~~~v~~~~v~~~v~~vm~-~~-~g~~~r~ra~~l 442 (480)
T PLN02555 408 EAENKLITREEVAECLLEATV-GE-KAAELKQNALKW 442 (480)
T ss_pred ccccCcCcHHHHHHHHHHHhc-Cc-hHHHHHHHHHHH
Confidence 1 68899999999997 64 234455444443
|
|
| >PF15024 Glyco_transf_18: Glycosyltransferase family 18 | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.12 Score=50.77 Aligned_cols=152 Identities=17% Similarity=0.101 Sum_probs=98.7
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHH
Q 012436 271 AIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLV 350 (464)
Q Consensus 271 ~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~ 350 (464)
-++|-=...-+|+-+..++++.+. . +++-.|.+.... ...+++.|.=+|.++.+|+.
T Consensus 280 AlVyGK~~~~w~~k~~~l~~l~~~---~-----eih~tV~~~~~~---------------~~~~P~~V~NHG~l~~~ef~ 336 (559)
T PF15024_consen 280 ALVYGKERYMWKGKEKYLDVLHKY---M-----EIHGTVYDEPQR---------------PPNVPSFVKNHGILSGDEFQ 336 (559)
T ss_pred eEEEccchhhhcCcHHHHHHHHhh---c-----EEEEEeccCCCC---------------CcccchhhhhcCcCCHHHHH
Confidence 344433345577888877777553 1 556566544321 11225567778999999999
Q ss_pred HHHhcCcEEEEcCC-CCCCChHHHHHHHhCCcEEEeCCCCCcc----ceecc----------------cCCccceeecC-
Q 012436 351 KLLGGAVVGIHSMI-DEHFGISVVEYMAAGAIPIAHNSAGPKM----DIVLE----------------EDGQQTGFLAQ- 408 (464)
Q Consensus 351 ~~l~~ad~~v~ps~-~e~~~~~~~Ea~a~G~PvI~~~~~~~~~----~~v~~----------------~~~~~~g~~~~- 408 (464)
++++.+.++|-... .| |-+.+||+|+|+|.|-........ ++..+ .++.-..+.++
T Consensus 337 ~lL~~akvfiGlGfP~E--gPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY~e~~iG~PhVytVd~ 414 (559)
T PF15024_consen 337 QLLRKAKVFIGLGFPYE--GPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPYAEEFIGEPHVYTVDI 414 (559)
T ss_pred HHHHhhhEeeecCCCCC--CCChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccCChHHHhhCCCCeEEEEcC
Confidence 99999999996532 33 456899999999988765432211 11110 01122335555
Q ss_pred -CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-HccCHHHHHHHHHHHHHH
Q 012436 409 -NAEEYADAIVKIISMPETERLEMAAAARRRA-ARFSEQRFYEDFKAAIRP 457 (464)
Q Consensus 409 -~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~ 457 (464)
|.+++.+||+++++ ++. .-++ -+|+.+.+.+++..+++.
T Consensus 415 ~n~~~v~~Avk~il~-~~v---------~Py~P~efT~egmLeRv~~~ie~ 455 (559)
T PF15024_consen 415 NNSTEVEAAVKAILA-TPV---------EPYLPYEFTCEGMLERVNALIEK 455 (559)
T ss_pred CCHHHHHHHHHHHHh-cCC---------CCcCCcccCHHHHHHHHHHHHHh
Confidence 99999999999998 542 2355 789999999999887764
|
|
| >COG4370 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.16 Score=45.67 Aligned_cols=209 Identities=14% Similarity=0.109 Sum_probs=113.7
Q ss_pred hcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccC---CCCCCCCC-cEEEEEecc--CCCCChHHHHHHHHH
Q 012436 220 SCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVL---PLERSTEY-PAIISVAQF--RPEKAHPLQLEAFSV 293 (464)
Q Consensus 220 ~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~---~~~~~~~~-~~i~~~G~~--~~~K~~~~ll~a~~~ 293 (464)
++|-.++.-.....+.+.+. |+ +...+.|+. .+...+. +....... ..-+-.|+- +...|...++.++..
T Consensus 177 rrc~~vf~rD~~Taq~L~~r-gv--na~~vGnpm-mD~L~p~~~~~q~l~~g~~viaLLPGsR~pea~~nl~~il~slca 252 (412)
T COG4370 177 RRCWAVFPRDALTAQHLANR-GV--NAAYVGNPM-MDGLPPPERDPQLLLTGVPVIALLPGSRVPEAQTNLAVILGSLCA 252 (412)
T ss_pred ccceeeeccccccHHHHHhc-CC--chhhccChh-hccCCCccCCchhhccCCceEEecCCCCChHHHhhHHHHHHHHhh
Confidence 78888998888888888776 33 333455543 1112211 11111222 223344543 445788888887777
Q ss_pred HHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCC--------CcEEEccCCChhHHHHHHhcCcEEEEcCCC
Q 012436 294 ALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVD--------GNVEFYKNLLYRDLVKLLGGAVVGIHSMID 365 (464)
Q Consensus 294 l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~--------~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~ 365 (464)
+..... . +++.+.....-+ ..-+..+.++-|.. +|-.+ ..+.+...+++..+|+.+-
T Consensus 253 l~~~~a----~--vvfw~ai~~~lp---l~~l~~l~e~~gWq~~ad~~~kdnc~l--~lsqqsfadiLH~adaalg---- 317 (412)
T COG4370 253 LPAMFA----L--VVFWAAIAPELP---LLLLWTLEERQGWQPLADRFGKDNCSL--WLSQQSFADILHAADAALG---- 317 (412)
T ss_pred hHHHHH----H--HHHHhccCcCCC---HHHHHHHHHhcCcchhhhhhccCceEE--EEeHHHHHHHHHHHHHHHH----
Confidence 765531 2 233343222111 12333333333322 12222 2345788888888887442
Q ss_pred CCCChHHHHHHHhCCcEEEeCCCCCccceecccC---C---ccceeecC-CHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012436 366 EHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEED---G---QQTGFLAQ-NAEEYADAIVKIISMPETERLEMAAAARRR 438 (464)
Q Consensus 366 e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~---~---~~~g~~~~-~~~~la~~i~~l~~~~~~~~~~~~~~~~~~ 438 (464)
.-|...-.+.-.|+|||.....|+ .+.-... . |..-.++. +.++-+.+.++++. |++..+.+.+|++++
T Consensus 318 -mAGTAtEQavGLGkPvi~fPg~GP--Qy~pgFA~rQ~rLLG~sltlv~~~aq~a~~~~q~ll~-dp~r~~air~nGqrR 393 (412)
T COG4370 318 -MAGTATEQAVGLGKPVIGFPGQGP--QYNPGFAERQQRLLGASLTLVRPEAQAAAQAVQELLG-DPQRLTAIRHNGQRR 393 (412)
T ss_pred -hccchHHHhhccCCceeecCCCCC--CcChHHHHHHHHHhcceeeecCCchhhHHHHHHHHhc-ChHHHHHHHhcchhh
Confidence 235556678899999999876554 2211000 0 22223444 44444444455999 999999999999988
Q ss_pred H-HccCHHHHHHHH
Q 012436 439 A-ARFSEQRFYEDF 451 (464)
Q Consensus 439 ~-~~~s~~~~~~~~ 451 (464)
+ +.=...++++.+
T Consensus 394 iGqaGaa~rIAe~l 407 (412)
T COG4370 394 IGQAGAARRIAEEL 407 (412)
T ss_pred ccCcchHHHHHHHH
Confidence 7 544334444433
|
|
| >PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.019 Score=41.07 Aligned_cols=71 Identities=24% Similarity=0.281 Sum_probs=50.3
Q ss_pred CcccCCC-ceeeeeecccccccccCcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccch----hhhccCceEEEE
Q 012436 93 GVELLHP-PKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP----LARIFGCRVICY 167 (464)
Q Consensus 93 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~----~~~~~~~p~v~~ 167 (464)
|++.-.+ .++++++.........+|.+ +......+.++.+++.|+||.++..+.... -++..|.+.|++
T Consensus 8 GvRyltngLKVYYlP~~~~~~~~t~Pt~------~~~~pl~R~IlirE~I~IVHgH~a~S~l~hE~i~hA~~mGlktVfT 81 (90)
T PF08288_consen 8 GVRYLTNGLKVYYLPLKVFYNQCTLPTL------FGSFPLLRNILIRERIDIVHGHQAFSTLCHEAILHARTMGLKTVFT 81 (90)
T ss_pred eeEEcCCCeEEEeecchhhhcCcchHHH------HHhhHHHHHHHHHcCeeEEEeehhhhHHHHHHHHHHHhCCCcEEee
Confidence 4444444 48888888776665555544 444555666678889999998877665543 566899999999
Q ss_pred ee
Q 012436 168 TH 169 (464)
Q Consensus 168 ~h 169 (464)
-|
T Consensus 82 DH 83 (90)
T PF08288_consen 82 DH 83 (90)
T ss_pred cc
Confidence 99
|
These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process |
| >PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [] | Back alignment and domain information |
|---|
Probab=94.76 E-value=0.16 Score=42.80 Aligned_cols=84 Identities=19% Similarity=0.137 Sum_probs=53.5
Q ss_pred HHHHHHhhhcCCcEEEecccccccch---hhh--cc-CceEEEEeeCCcchhhhhhcccccccccCCCcccccchhhhHH
Q 012436 130 YLSWEALCKFTPLYYFDTSGYAFTYP---LAR--IF-GCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQC 203 (464)
Q Consensus 130 ~~~~~~l~~~~~Dvv~~~~~~~~~~~---~~~--~~-~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (464)
..+.+.+++.+||+|+++...+...+ +.+ .. ++|++..+-+ . +....
T Consensus 79 ~~l~~~l~~~~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tvvTD-~---~~~H~----------------------- 131 (169)
T PF06925_consen 79 RRLIRLLREFQPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTVVTD-F---DTVHP----------------------- 131 (169)
T ss_pred HHHHHHHhhcCCCEEEECCcchhhhHHHHHHHhhcccCCcEEEEEcC-C---CCCCc-----------------------
Confidence 35667788999999998888765552 222 23 5666532221 0 00001
Q ss_pred HHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCC
Q 012436 204 KIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPP 252 (464)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~ 252 (464)
.++...+|..++.|+++++.+.+.+-.++++.+...|
T Consensus 132 ------------~W~~~~~D~y~Vase~~~~~l~~~Gi~~~~I~vtGiP 168 (169)
T PF06925_consen 132 ------------FWIHPGVDRYFVASEEVKEELIERGIPPERIHVTGIP 168 (169)
T ss_pred ------------CeecCCCCEEEECCHHHHHHHHHcCCChhHEEEeCcc
Confidence 1222789999999999999999964337788766544
|
; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process |
| >KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=94.39 E-value=1.6 Score=40.95 Aligned_cols=169 Identities=13% Similarity=0.161 Sum_probs=106.5
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcC-CCCCccHHHHHHHHHHHHhcCCCCcEEEc-----cCC
Q 012436 271 AIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGS-CRNKSDEERLQSLKDKSIELKVDGNVEFY-----KNL 344 (464)
Q Consensus 271 ~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~-~~~~~~~~~~~~l~~~~~~~~l~~~v~~~-----g~~ 344 (464)
.+=|.|+....+-.....+...+.+++ ++.++|+-. |....+.+.++++.+..+..+ +++|.|. |--
T Consensus 156 ~iP~ygsyte~dpv~ia~egv~~fKke------~fdvIIvDTSGRh~qe~sLfeEM~~v~~ai~-Pd~vi~VmDasiGQa 228 (483)
T KOG0780|consen 156 RVPFYGSYTEADPVKIASEGVDRFKKE------NFDVIIVDTSGRHKQEASLFEEMKQVSKAIK-PDEIIFVMDASIGQA 228 (483)
T ss_pred CCeeEecccccchHHHHHHHHHHHHhc------CCcEEEEeCCCchhhhHHHHHHHHHHHhhcC-CCeEEEEEeccccHh
Confidence 344556667777778888888888876 788888874 667777788899998888777 6777775 333
Q ss_pred ChhHHHHHHhcCcE--EEEcCC----CCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceee---c--CCHHHH
Q 012436 345 LYRDLVKLLGGAVV--GIHSMI----DEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFL---A--QNAEEY 413 (464)
Q Consensus 345 ~~~~~~~~l~~ad~--~v~ps~----~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~---~--~~~~~l 413 (464)
-.++...+=...|+ .|++-. ..|..++..+ +.++|||--..|-..+|+-.- ..--|+ . .|.+.+
T Consensus 229 ae~Qa~aFk~~vdvg~vIlTKlDGhakGGgAlSaVa--aTksPIiFIGtGEhmdDlE~F---~pk~FvsrlLGmGDi~gl 303 (483)
T KOG0780|consen 229 AEAQARAFKETVDVGAVILTKLDGHAKGGGALSAVA--ATKSPIIFIGTGEHMDDLEPF---DPKPFVSRLLGMGDIEGL 303 (483)
T ss_pred HHHHHHHHHHhhccceEEEEecccCCCCCceeeehh--hhCCCEEEEecCccccccCCC---ChHHHHHHHhccccHHHH
Confidence 33444444455675 344421 2233344443 579999998877553333211 111122 2 299999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q 012436 414 ADAIVKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIR 456 (464)
Q Consensus 414 a~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 456 (464)
.+.+.++..-|.++ +.++-.+ -+|+...+.+++.+++.
T Consensus 304 vek~~ev~~~d~~e---l~~kl~~--gkFtlrd~y~Qfq~imk 341 (483)
T KOG0780|consen 304 VEKVQEVGKDDAKE---LVEKLKQ--GKFTLRDFYDQFQNIMK 341 (483)
T ss_pred HHHHHHHhhhhHHH---HHHHHHh--CCccHHHHHHHHHHHHh
Confidence 99999887303222 2222211 57999999999988764
|
|
| >PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT | Back alignment and domain information |
|---|
Probab=93.93 E-value=0.7 Score=42.22 Aligned_cols=105 Identities=13% Similarity=0.123 Sum_probs=60.2
Q ss_pred CCcEEEEEeccCCC-------CChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEE
Q 012436 268 EYPAIISVAQFRPE-------KAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEF 340 (464)
Q Consensus 268 ~~~~i~~~G~~~~~-------K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~ 340 (464)
++..+++..+.... .....+++.+..+.+.. |+.+++|-=...+..... ...+.+.. +.. ++.+
T Consensus 116 ~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~~~----p~~~lvvK~HP~~~~~~~-~~~~~~~~---~~~-~~~~ 186 (269)
T PF05159_consen 116 NKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAKEN----PDAKLVVKPHPDERGGNK-YSYLEELP---NLP-NVVI 186 (269)
T ss_pred CCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHHHC----CCCEEEEEECchhhCCCC-hhHhhhhh---cCC-CeEE
Confidence 33455555554333 24566677777776665 678877655431110000 01111111 223 4444
Q ss_pred ccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCC
Q 012436 341 YKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSA 388 (464)
Q Consensus 341 ~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~ 388 (464)
...- -.+.+++..||.++.-+ +.+-+||+.+|+||++....
T Consensus 187 ~~~~--~~~~~Ll~~s~~Vvtin-----StvGlEAll~gkpVi~~G~~ 227 (269)
T PF05159_consen 187 IDDD--VNLYELLEQSDAVVTIN-----STVGLEALLHGKPVIVFGRA 227 (269)
T ss_pred ECCC--CCHHHHHHhCCEEEEEC-----CHHHHHHHHcCCceEEecCc
Confidence 3322 57889999999877542 56789999999999997644
|
Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport |
| >COG1887 TagB Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=93.76 E-value=5.9 Score=38.22 Aligned_cols=217 Identities=14% Similarity=0.097 Sum_probs=116.3
Q ss_pred hhcCCEEEEcCHHHHHHHHHHhCC-CCCeEEecCCCCCCCCc-----------cCCCCCCCCCcEEEEEeccCCCC----
Q 012436 219 GSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQ-----------VLPLERSTEYPAIISVAQFRPEK---- 282 (464)
Q Consensus 219 ~~~ad~vi~~S~~~~~~~~~~~~~-~~~i~~i~~~~d~~~~~-----------~~~~~~~~~~~~i~~~G~~~~~K---- 282 (464)
..+.|.+.+.++.....+.+.++. ..++..+.-|-....+. ......+.++.+|+|.-.+....
T Consensus 146 ~~~~dy~~~~~~~~~~if~~~f~~~~~~i~~~G~Pr~D~~~~~~~~~~~~~~~~~~~~~~~~k~vIlyaPTfr~~~~~~~ 225 (388)
T COG1887 146 RNHWDYLISPNPESTAIFAEAFNIDKENILETGYPRNDKLFDEAGKTEDILLIQLALPLPQDKKVILYAPTFRDNDVLIG 225 (388)
T ss_pred eeeeeeeeeCChhhHHHHHHHhcccccceeecCcccchhhhhhccchhhhHHHhhhcCCcccCceEEecCCccCCccccc
Confidence 367788999998888888888877 44554443333221121 01112224578999998887665
Q ss_pred --ChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHHHhcCcEEE
Q 012436 283 --AHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGI 360 (464)
Q Consensus 283 --~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v 360 (464)
..+..++..+....... ++..+++-=. +... +.+...- ...+.+...-. ..++.++|..+|++|
T Consensus 226 ~~~~~~~~~~~~~~~~l~~---~~~~ii~k~H-p~is-----~~~~~~~---~~~~~~~~vs~--~~di~dll~~sDiLI 291 (388)
T COG1887 226 TQFFNLDIDIEKLKEKLGE---NEYVIIVKPH-PLIS-----DKIDKRY---ALDDFVLDVSD--NADINDLLLVSDILI 291 (388)
T ss_pred hhhhhhhhhHHHHHHhhcc---CCeEEEEecC-hhhh-----hhhhhhh---hccceeEeccc--chhHHHHHhhhCEEE
Confidence 23333333332222221 1555544433 2110 1111100 11222333322 489999999999998
Q ss_pred EcCCCCCCChHHHHHHHhCCcEEEeCCCCCc----cceecccCCccceeecCCHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 012436 361 HSMIDEHFGISVVEYMAAGAIPIAHNSAGPK----MDIVLEEDGQQTGFLAQNAEEYADAIVKIISMPETERLEMAAAAR 436 (464)
Q Consensus 361 ~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~----~~~v~~~~~~~~g~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~ 436 (464)
..++.++.|+|...+|||..-..... .....+.....-|-++.+.+++.++|..... +++...+-.+...
T Consensus 292 -----TDySSv~fdf~~l~KPiify~~D~~~y~~~rg~~~d~~~~~Pg~~~~~~~~li~ai~~~~~-~~~~~~~k~~~~~ 365 (388)
T COG1887 292 -----TDYSSVIFDFMLLDKPIIFYTYDLEQYDELRGFYLDYKFEAPGEVVETQEELIDAIKPYDE-DGNYDLEKLRVFN 365 (388)
T ss_pred -----eechHHHHHHHHhcCcEEEEecChHHHHhhhhhhhhHHhcCCccccccHHHHHHHHHhhhc-ccchhHHHHHHHH
Confidence 45677899999999999986432210 0111110002345566689999999988877 4443333222222
Q ss_pred HHHHccCHHHHHHHHHHHH
Q 012436 437 RRAARFSEQRFYEDFKAAI 455 (464)
Q Consensus 437 ~~~~~~s~~~~~~~~~~~~ 455 (464)
+....+.-....+++.+.+
T Consensus 366 ~~~~~~~dg~ss~ri~~~i 384 (388)
T COG1887 366 DKFNSYEDGRSSERILKLI 384 (388)
T ss_pred HhhcccccccHHHHHHHHH
Confidence 3333334455566655544
|
|
| >KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion] | Back alignment and domain information |
|---|
Probab=93.53 E-value=1.2 Score=44.74 Aligned_cols=91 Identities=23% Similarity=0.191 Sum_probs=53.1
Q ss_pred CCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCC----CCccceecccCCccceeecC--
Q 012436 335 DGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSA----GPKMDIVLEEDGQQTGFLAQ-- 408 (464)
Q Consensus 335 ~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~----~~~~~~v~~~~~~~~g~~~~-- 408 (464)
..+|...+++|+.++. ++...+..+- .+-|++ +++|++.+|+|+|+.+.- -....+..+ +..+....
T Consensus 334 ~~nV~~~~W~PQ~~ll--l~H~~v~~Fv-THgG~n-St~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~---g~~~v~~~~~ 406 (496)
T KOG1192|consen 334 RGNVVLSKWAPQNDLL--LDHPAVGGFV-THGGWN-STLESIYSGVPMVCVPLFGDQPLNARLLVRH---GGGGVLDKRD 406 (496)
T ss_pred cCceEEecCCCcHHHh--cCCCcCcEEE-ECCccc-HHHHHHhcCCceecCCccccchhHHHHHHhC---CCEEEEehhh
Confidence 3479999999988876 3222222222 344555 559999999999964322 222223333 44444442
Q ss_pred -CHHHHHHHHHHHHcCCHHHHHHHHH
Q 012436 409 -NAEEYADAIVKIISMPETERLEMAA 433 (464)
Q Consensus 409 -~~~~la~~i~~l~~~~~~~~~~~~~ 433 (464)
+..++.+++.+++. +++..+...+
T Consensus 407 ~~~~~~~~~~~~il~-~~~y~~~~~~ 431 (496)
T KOG1192|consen 407 LVSEELLEAIKEILE-NEEYKEAAKR 431 (496)
T ss_pred cCcHHHHHHHHHHHc-ChHHHHHHHH
Confidence 33338888888887 6654444333
|
|
| >PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=92.78 E-value=0.77 Score=34.42 Aligned_cols=78 Identities=14% Similarity=-0.057 Sum_probs=51.6
Q ss_pred EEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEE--ccCCChhH--HHHHHhcCcEEEEcCCCCCCCh---HHHHHHHhC
Q 012436 307 LQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEF--YKNLLYRD--LVKLLGGAVVGIHSMIDEHFGI---SVVEYMAAG 379 (464)
Q Consensus 307 l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~--~g~~~~~~--~~~~l~~ad~~v~ps~~e~~~~---~~~Ea~a~G 379 (464)
++++|+.. .....+++.++++|.. .+.+ -+.....+ +.+.+..||++|++...-+-.. +--+|-..|
T Consensus 2 vliVGG~~-----~~~~~~~~~~~~~G~~-~~~hg~~~~~~~~~~~l~~~i~~aD~VIv~t~~vsH~~~~~vk~~akk~~ 75 (97)
T PF10087_consen 2 VLIVGGRE-----DRERRYKRILEKYGGK-LIHHGRDGGDEKKASRLPSKIKKADLVIVFTDYVSHNAMWKVKKAAKKYG 75 (97)
T ss_pred EEEEcCCc-----ccHHHHHHHHHHcCCE-EEEEecCCCCccchhHHHHhcCCCCEEEEEeCCcChHHHHHHHHHHHHcC
Confidence 56777632 2247788888888754 3333 14443444 9999999999888764333332 246777889
Q ss_pred CcEEEeCCCCC
Q 012436 380 AIPIAHNSAGP 390 (464)
Q Consensus 380 ~PvI~~~~~~~ 390 (464)
+|++.++..+.
T Consensus 76 ip~~~~~~~~~ 86 (97)
T PF10087_consen 76 IPIIYSRSRGV 86 (97)
T ss_pred CcEEEECCCCH
Confidence 99999986654
|
|
| >PLN03015 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=92.59 E-value=2.2 Score=42.24 Aligned_cols=77 Identities=16% Similarity=0.075 Sum_probs=47.3
Q ss_pred EEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCc---ccee-cccCCccceeec------
Q 012436 338 VEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPK---MDIV-LEEDGQQTGFLA------ 407 (464)
Q Consensus 338 v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~---~~~v-~~~~~~~~g~~~------ 407 (464)
+.+.+++|+.++. +...+..+-+ + +--++++||+++|+|+|+-...+.- ...+ .. -+.|+-.
T Consensus 337 l~v~~W~PQ~~vL---~h~~vg~fvt-H-~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~---~gvg~~~~~~~~~ 408 (470)
T PLN03015 337 LVVTQWAPQVEIL---SHRSIGGFLS-H-CGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEE---IGVAVRTSELPSE 408 (470)
T ss_pred eEEEecCCHHHHh---ccCccCeEEe-c-CCchhHHHHHHcCCCEEecccccchHHHHHHHHHH---hCeeEEecccccC
Confidence 6678999888764 4444422221 2 2245899999999999997643220 1111 12 2333322
Q ss_pred --CCHHHHHHHHHHHHc
Q 012436 408 --QNAEEYADAIVKIIS 422 (464)
Q Consensus 408 --~~~~~la~~i~~l~~ 422 (464)
-+.++++++|+++++
T Consensus 409 ~~v~~e~i~~~v~~lm~ 425 (470)
T PLN03015 409 KVIGREEVASLVRKIVA 425 (470)
T ss_pred CccCHHHHHHHHHHHHc
Confidence 177899999999984
|
|
| >PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses [] | Back alignment and domain information |
|---|
Probab=92.10 E-value=0.27 Score=45.77 Aligned_cols=68 Identities=16% Similarity=0.159 Sum_probs=45.9
Q ss_pred hHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCC-cEEEeCCC-CCccceecccCCccceeecC--CHHHHHHHH
Q 012436 347 RDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGA-IPIAHNSA-GPKMDIVLEEDGQQTGFLAQ--NAEEYADAI 417 (464)
Q Consensus 347 ~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~-PvI~~~~~-~~~~~~v~~~~~~~~g~~~~--~~~~la~~i 417 (464)
.+..+.|+++.+++.|.....+..-++|||++|+ |||.++.- -+.++++.- ....+.++ +..++.+.|
T Consensus 228 ~~~~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~ldw---~~fsv~v~~~~~~~l~~iL 299 (302)
T PF03016_consen 228 SEYMELLRNSKFCLCPRGDGPWSRRLYEALAAGCIPVIISDDYVLPFEDVLDW---SRFSVRVPEADLPELPEIL 299 (302)
T ss_pred hHHHHhcccCeEEEECCCCCcccchHHHHhhhceeeEEecCcccCCcccccCH---HHEEEEECHHHHHHHHHHH
Confidence 5688999999999999776668888999999998 77776522 222444433 34445554 444444443
|
Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane |
| >PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes | Back alignment and domain information |
|---|
Probab=90.26 E-value=1.1 Score=40.63 Aligned_cols=88 Identities=18% Similarity=0.187 Sum_probs=55.2
Q ss_pred CCcEEEeccc-ccccch-hhh-ccCceEEEEeeCCcchhhhhhcccccccccCCCcccccchhh---hHHHHHHHHHHHH
Q 012436 140 TPLYYFDTSG-YAFTYP-LAR-IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWL---SQCKIVYYTFFSW 213 (464)
Q Consensus 140 ~~Dvv~~~~~-~~~~~~-~~~-~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 213 (464)
+.|++|+.+. ++..+. +++ ..|+|+++|=|+-..-. +.... ....|. ...+..+.+.+..
T Consensus 172 ~advyHsvstGyAgl~g~~~k~~~g~P~lLTEHGIY~RE--------R~~ei------~~a~w~~~~~~~r~~wi~~f~~ 237 (268)
T PF11997_consen 172 KADVYHSVSTGYAGLLGALAKYRYGRPFLLTEHGIYTRE--------REIEI------LQADWIWESPYVRDLWIRFFES 237 (268)
T ss_pred CCCEEecCCccHHHHHHHHHHHHhCCCEEEecCCccHHH--------HHHHH------HhcccccchHHHHHHHHHHHHH
Confidence 5699996554 333333 444 89999999999432111 11000 112232 4556667778888
Q ss_pred HHHHHhhcCCEEEEcCHHHHHHHHHHhCC
Q 012436 214 MYGLVGSCADLAMVNSSWTQSHIEKLWGI 242 (464)
Q Consensus 214 ~~~~~~~~ad~vi~~S~~~~~~~~~~~~~ 242 (464)
+.+.+++.||.|++.++..++ ++...|.
T Consensus 238 l~~~~Y~~Ad~I~~l~~~n~~-~q~~~Ga 265 (268)
T PF11997_consen 238 LSRLAYRAADRITPLYEYNRE-WQIELGA 265 (268)
T ss_pred HHHHHHHhhCeecccchhhHH-HHHHhCC
Confidence 889999999999999997544 4444443
|
It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY. |
| >KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures] | Back alignment and domain information |
|---|
Probab=90.06 E-value=5.9 Score=39.32 Aligned_cols=93 Identities=15% Similarity=0.162 Sum_probs=61.1
Q ss_pred hhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCC-cEEEeCCC-CCccceecccCCccceeecCCHHHHHHHHHHHHc-
Q 012436 346 YRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGA-IPIAHNSA-GPKMDIVLEEDGQQTGFLAQNAEEYADAIVKIIS- 422 (464)
Q Consensus 346 ~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~-PvI~~~~~-~~~~~~v~~~~~~~~g~~~~~~~~la~~i~~l~~- 422 (464)
...+.+.++.+.+++.|...+...-.+.||+..|| |||.++.- ....+.+.- .+..+.++ .+++-+.|.+.+.
T Consensus 334 ~~~y~~~m~~S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~~~lpf~~~~d~---~~fSV~v~-~~~v~~~~~~iL~~ 409 (464)
T KOG1021|consen 334 PLNYMEGMQDSKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDGIQLPFGDVLDW---TEFSVFVP-EKDVPELIKNILLS 409 (464)
T ss_pred cchHHHHhhcCeEEECCCCCCcccHhHHHHHHhCCccEEEcCCcccCcCCCccc---eEEEEEEE-HHHhhhHHHHHHHh
Confidence 36788999999999999988888889999999998 89988753 332333333 34455555 5555555444443
Q ss_pred CCHHHHHHHHHHHHHHH-Hcc
Q 012436 423 MPETERLEMAAAARRRA-ARF 442 (464)
Q Consensus 423 ~~~~~~~~~~~~~~~~~-~~~ 442 (464)
...++..+|.++....+ +.+
T Consensus 410 i~~~~~~~m~~~v~~~v~r~~ 430 (464)
T KOG1021|consen 410 IPEEEVLRMRENVIRLVPRHF 430 (464)
T ss_pred cCHHHHHHHHHHHHHHHHhhE
Confidence 23445566666655433 443
|
|
| >PF04392 ABC_sub_bind: ABC transporter substrate binding protein; InterPro: IPR007487 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energize diverse biological systems | Back alignment and domain information |
|---|
Probab=88.85 E-value=5.5 Score=36.86 Aligned_cols=155 Identities=13% Similarity=0.052 Sum_probs=72.8
Q ss_pred HhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCC-CCCCCccCCCCCCCCCcEEEEEeccCCCCChHHHHHHHHHHHH
Q 012436 218 VGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPC-DTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALR 296 (464)
Q Consensus 218 ~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~-d~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~ 296 (464)
.-...|.|++.+......+.+... . .+-++..++ |+....-......++ ..+.-+. ....++..++.++++..
T Consensus 56 ~~~~~DlIi~~gt~aa~~~~~~~~-~-~iPVVf~~V~dp~~~~l~~~~~~~~-~nvTGv~---~~~~~~~~l~l~~~l~P 129 (294)
T PF04392_consen 56 KAQKPDLIIAIGTPAAQALAKHLK-D-DIPVVFCGVSDPVGAGLVDSLDRPG-KNVTGVS---ERPPIEKQLELIKKLFP 129 (294)
T ss_dssp CCTS-SEEEEESHHHHHHHHHH-S-S--S-EEEECES-TTTTTS-S-SSS---SSEEEEE---E---HHHHHHHHHHHST
T ss_pred hcCCCCEEEEeCcHHHHHHHHhcC-C-CcEEEEEeccChhhhhccccccCCC-CCEEEEE---CCcCHHHHHHHHHHhCC
Confidence 346899999999888888877753 2 144566666 322211111111111 2333232 33455666666666643
Q ss_pred HhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHHHh----cCcEEEEcCC---CCCCC
Q 012436 297 KLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLG----GAVVGIHSMI---DEHFG 369 (464)
Q Consensus 297 ~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~----~ad~~v~ps~---~e~~~ 369 (464)
.. -++-++-+..+.......+.+++.++++|+. +....--+.+++.+.+. ..|+++.+.. ...+.
T Consensus 130 ~~------k~igvl~~~~~~~~~~~~~~~~~~a~~~g~~--l~~~~v~~~~~~~~~~~~l~~~~da~~~~~~~~~~~~~~ 201 (294)
T PF04392_consen 130 DA------KRIGVLYDPSEPNSVAQIEQLRKAAKKLGIE--LVEIPVPSSEDLEQALEALAEKVDALYLLPDNLVDSNFE 201 (294)
T ss_dssp T--------EEEEEEETT-HHHHHHHHHHHHHHHHTT-E--EEEEEESSGGGHHHHHHHHCTT-SEEEE-S-HHHHHTHH
T ss_pred CC------CEEEEEecCCCccHHHHHHHHHHHHHHcCCE--EEEEecCcHhHHHHHHHHhhccCCEEEEECCcchHhHHH
Confidence 21 2442333332222235667888888888864 33222223355555544 5687766642 22222
Q ss_pred hHHHHHHHhCCcEEEeC
Q 012436 370 ISVVEYMAAGAIPIAHN 386 (464)
Q Consensus 370 ~~~~Ea~a~G~PvI~~~ 386 (464)
..+..+...++|++++.
T Consensus 202 ~i~~~~~~~~iPv~~~~ 218 (294)
T PF04392_consen 202 AILQLANEAKIPVFGSS 218 (294)
T ss_dssp HHHHHCCCTT--EEESS
T ss_pred HHHHHHHhcCCCEEECC
Confidence 33455667899999976
|
ABC transporters are minimally constituted of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These regions can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. This family contains many hypothetical proteins and some ABC transporter substrate binding proteins.; PDB: 3LFT_A 3LKV_A. |
| >PF12996 DUF3880: DUF based on E | Back alignment and domain information |
|---|
Probab=88.39 E-value=1.4 Score=31.61 Aligned_cols=62 Identities=11% Similarity=0.115 Sum_probs=47.8
Q ss_pred HHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCCCC---CCCCCcEEEEEeccCC
Q 012436 217 LVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLE---RSTEYPAIISVAQFRP 280 (464)
Q Consensus 217 ~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~~~---~~~~~~~i~~~G~~~~ 280 (464)
.+...+|.|++..+...+.+++.+ ..++..+|-++|+..+.+.... ...-.--|.|+|++..
T Consensus 14 ~i~~~~~~iFt~D~~~~~~~~~~G--~~~V~yLPLAa~~~~~~p~~~~~~~~~~~~~dIsFVG~~y~ 78 (79)
T PF12996_consen 14 SIANSYDYIFTFDRSFVEEYRNLG--AENVFYLPLAANPERFRPIPVDPEERKKYECDISFVGSLYP 78 (79)
T ss_pred hhCCCCCEEEEECHHHHHHHHHcC--CCCEEEccccCCHHHhCcccCCcccccccCCCEEEeCcCcc
Confidence 345889999999999999999874 6799999999999988865443 1223346899998643
|
rectale Gene description (DUF3880); InterPro: IPR024542 This entry represents proteins of unknown function. The Eubacterium rectale gene appears to be upregulated in the presence of Bacteroides thetaiotaomicron compared to growth in pure culture []. |
| >KOG3339 consensus Predicted glycosyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=88.39 E-value=6.8 Score=32.70 Aligned_cols=59 Identities=19% Similarity=0.247 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHh-hhcccccccccc----eEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEc
Q 012436 11 VITAVLASILILA-SHVHNARRNRTT----SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYT 74 (464)
Q Consensus 11 ~~~~~~~~~~~~~-~~~~~~~~~~~m----kI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~ 74 (464)
+|+-+.+.+.+++ +|..++.++.+. .++++-.+ ||...-+.+|.+.|.+.. +..-.+..
T Consensus 10 vig~~~~li~~~v~~~~~~~~k~~Pk~~s~~~lVvlGS----GGHT~EMlrLl~~l~~~y-~~r~yI~a 73 (211)
T KOG3339|consen 10 VIGYVIVLIALLVFRHTQRSTKKDPKDKSLSTLVVLGS----GGHTGEMLRLLEALQDLY-SPRSYIAA 73 (211)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCcCCcceEEEEEcC----CCcHHHHHHHHHHHHhhc-CceEEEEe
Confidence 3343333333333 555555555444 78876443 477777788999997763 44444433
|
|
| >COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=85.87 E-value=35 Score=33.06 Aligned_cols=137 Identities=13% Similarity=0.090 Sum_probs=74.8
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHH
Q 012436 270 PAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDL 349 (464)
Q Consensus 270 ~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~ 349 (464)
..++.+|.- +..--+++.|..++ --++.|++... +.-++++++++ ...++.+++
T Consensus 179 ~~vlvIGAG------em~~lva~~L~~~g-----~~~i~IaNRT~--------erA~~La~~~~-------~~~~~l~el 232 (414)
T COG0373 179 KKVLVIGAG------EMGELVAKHLAEKG-----VKKITIANRTL--------ERAEELAKKLG-------AEAVALEEL 232 (414)
T ss_pred CeEEEEccc------HHHHHHHHHHHhCC-----CCEEEEEcCCH--------HHHHHHHHHhC-------CeeecHHHH
Confidence 456666631 22223344444442 35777777653 66777788776 223466999
Q ss_pred HHHHhcCcEEEEcCC--CCCCChHH-HHHHHhCCcEEEeCCCCCccceecccCCccceeecCCHHHHHHHHHHHHcCCHH
Q 012436 350 VKLLGGAVVGIHSMI--DEHFGISV-VEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQNAEEYADAIVKIISMPET 426 (464)
Q Consensus 350 ~~~l~~ad~~v~ps~--~e~~~~~~-~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~~~~~la~~i~~l~~~~~~ 426 (464)
.+++..+|+++..+. ..-.+... -+++..-...+..|.+-+ .++ .+..++-.|+..-|.|++....++-+.
T Consensus 233 ~~~l~~~DvVissTsa~~~ii~~~~ve~a~~~r~~~livDiavP-Rdi-e~~v~~l~~v~l~~iDDL~~iv~~n~~---- 306 (414)
T COG0373 233 LEALAEADVVISSTSAPHPIITREMVERALKIRKRLLIVDIAVP-RDV-EPEVGELPNVFLYTIDDLEEIVEENLE---- 306 (414)
T ss_pred HHhhhhCCEEEEecCCCccccCHHHHHHHHhcccCeEEEEecCC-CCC-CccccCcCCeEEEehhhHHHHHHHhHH----
Confidence 999999999887642 22223333 444454444577777655 444 331112233333367777666654333
Q ss_pred HHHHHHHHHHHH
Q 012436 427 ERLEMAAAARRR 438 (464)
Q Consensus 427 ~~~~~~~~~~~~ 438 (464)
.+++....+...
T Consensus 307 ~R~~~~~~ae~i 318 (414)
T COG0373 307 ARKEEAAKAEAI 318 (414)
T ss_pred HHHHHHHHHHHH
Confidence 444444444433
|
|
| >PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional | Back alignment and domain information |
|---|
Probab=85.30 E-value=22 Score=32.32 Aligned_cols=106 Identities=12% Similarity=-0.012 Sum_probs=67.5
Q ss_pred EEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCC--------CCCccHHHHHHHHHHHHhcCCCCcEEEccC
Q 012436 272 IISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSC--------RNKSDEERLQSLKDKSIELKVDGNVEFYKN 343 (464)
Q Consensus 272 i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~--------~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~ 343 (464)
++.+.....-.+.+.+++.++++++. ..+++..|.- ...-.++..+.+++.++++|++--..+...
T Consensus 28 ~~~iaGPCsie~~~~~~~~A~~lk~~------g~~~~r~~~~kpRTs~~s~~G~g~~gl~~l~~~~~~~Gl~~~te~~d~ 101 (266)
T PRK13398 28 KIIIAGPCAVESEEQMVKVAEKLKEL------GVHMLRGGAFKPRTSPYSFQGLGEEGLKILKEVGDKYNLPVVTEVMDT 101 (266)
T ss_pred EEEEEeCCcCCCHHHHHHHHHHHHHc------CCCEEEEeeecCCCCCCccCCcHHHHHHHHHHHHHHcCCCEEEeeCCh
Confidence 44454455566788899999998885 5567777721 111134667889999999998733333333
Q ss_pred CChhHHHHHHhcCcEEEEcCCCCCCChHHH-HHHHhCCcEEEeCC
Q 012436 344 LLYRDLVKLLGGAVVGIHSMIDEHFGISVV-EYMAAGAIPIAHNS 387 (464)
Q Consensus 344 ~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~-Ea~a~G~PvI~~~~ 387 (464)
.++..+...+|++-.+|. +.....++ ++...|+||+.++-
T Consensus 102 ---~~~~~l~~~vd~~kIga~-~~~n~~LL~~~a~~gkPV~lk~G 142 (266)
T PRK13398 102 ---RDVEEVADYADMLQIGSR-NMQNFELLKEVGKTKKPILLKRG 142 (266)
T ss_pred ---hhHHHHHHhCCEEEECcc-cccCHHHHHHHhcCCCcEEEeCC
Confidence 444444445899888874 22234444 44567999999874
|
|
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=84.79 E-value=30 Score=31.26 Aligned_cols=84 Identities=8% Similarity=-0.016 Sum_probs=52.2
Q ss_pred HHHhcCCC-Cc-EEEccCCChhHHHHHHhcCcEEEEcCCCC----CCChHHHHHHHhCCcEEEeCCCCCccceecccCCc
Q 012436 328 KSIELKVD-GN-VEFYKNLLYRDLVKLLGGAVVGIHSMIDE----HFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQ 401 (464)
Q Consensus 328 ~~~~~~l~-~~-v~~~g~~~~~~~~~~l~~ad~~v~ps~~e----~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~ 401 (464)
.+.++|++ ++ |-..|..+.+.=..++++.++-++-+... |+.-++--|..+|+|||.-+-+.. .
T Consensus 166 ~~~~~G~~~~~iia~~gPfs~e~n~al~~~~~i~~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP~~-~--------- 235 (256)
T TIGR00715 166 QALKLGFPSDRIIAMRGPFSEELEKALLREYRIDAVVTKASGEQGGELEKVKAAEALGINVIRIARPQT-I--------- 235 (256)
T ss_pred HHHHcCCChhcEEEEeCCCCHHHHHHHHHHcCCCEEEEcCCCCccchHHHHHHHHHcCCcEEEEeCCCC-C---------
Confidence 55666664 23 44568888777778888765533333222 334457778899999999876532 1
Q ss_pred cceeecCCHHHHHHHHHHHH
Q 012436 402 QTGFLAQNAEEYADAIVKII 421 (464)
Q Consensus 402 ~~g~~~~~~~~la~~i~~l~ 421 (464)
...-.+.+.+++.+.+.+++
T Consensus 236 ~~~~~~~~~~el~~~l~~~~ 255 (256)
T TIGR00715 236 PGVAIFDDISQLNQFVARLL 255 (256)
T ss_pred CCCccCCCHHHHHHHHHHhc
Confidence 11133457888887776653
|
This enzyme was found to be a monomer by gel filtration. |
| >PF11071 DUF2872: Protein of unknown function (DUF2872); InterPro: IPR019884 This entry represents a family of uncharacterised proteins, including YtoQ from Bacillus subtilis | Back alignment and domain information |
|---|
Probab=82.88 E-value=7.9 Score=30.21 Aligned_cols=72 Identities=13% Similarity=0.040 Sum_probs=39.4
Q ss_pred HHHHHHhcCcEEEEcC--CCCCCChH--HHHHHHhCCcEEEeCCCCCccceecccCCccceeecCCHHHHHHHHHHHH
Q 012436 348 DLVKLLGGAVVGIHSM--IDEHFGIS--VVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQNAEEYADAIVKII 421 (464)
Q Consensus 348 ~~~~~l~~ad~~v~ps--~~e~~~~~--~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~~~~~la~~i~~l~ 421 (464)
.-..++..||++|.-- .+--+... .--|.|+|+|.|.-.-... ..-+++ .....-..+.++++..+.+..++
T Consensus 65 RT~~li~~aDvVVvrFGekYKQWNaAfDAg~a~AlgKplI~lh~~~~-~HpLKE-vda~A~a~~et~~Qvv~iL~Yv~ 140 (141)
T PF11071_consen 65 RTRTLIEKADVVVVRFGEKYKQWNAAFDAGYAAALGKPLITLHPEEL-HHPLKE-VDAAALAVAETPEQVVEILRYVL 140 (141)
T ss_pred HHHHHHhhCCEEEEEechHHHHHHHHhhHHHHHHcCCCeEEecchhc-cccHHH-HhHhhHhhhCCHHHHHHHHHHHh
Confidence 4456789999887541 11122211 2447789999999764432 122222 00122234457887777776554
|
This family shows some sequence similarity to a family of nucleoside 2-deoxyribosyltransferases (COG3613 as iterated through CDD), but sufficiently remote that PSI-BLAST starting from YtoQ and exploring outwards does not discover the relationship. |
| >COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=82.35 E-value=40 Score=30.95 Aligned_cols=123 Identities=9% Similarity=0.017 Sum_probs=67.0
Q ss_pred ccceEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeecccccc
Q 012436 33 RTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIE 112 (464)
Q Consensus 33 ~~mkI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (464)
+..+|++. ..+|-|=...+..|.+.|.+.||.|-|+.+.++..+....+.............+++-+.+.+.+...
T Consensus 50 ~a~viGIT---G~PGaGKSTli~~L~~~l~~~G~rVaVlAVDPSSp~TGGsiLGDRiRM~~~~~~~~vFiRs~~srG~l- 125 (323)
T COG1703 50 NAHVIGIT---GVPGAGKSTLIEALGRELRERGHRVAVLAVDPSSPFTGGSILGDRIRMQRLAVDPGVFIRSSPSRGTL- 125 (323)
T ss_pred CCcEEEec---CCCCCchHHHHHHHHHHHHHCCcEEEEEEECCCCCCCCccccccHhhHHhhccCCCeEEeecCCCccc-
Confidence 44577773 33445677788999999999998888888877654444444322111112222222223233332211
Q ss_pred cccCcceehhhhchhhhHHHHHHhhhcCCcEEE-eccccccc-chhhhccCceEEEEee
Q 012436 113 ESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYF-DTSGYAFT-YPLARIFGCRVICYTH 169 (464)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~-~~~~~~~~-~~~~~~~~~p~v~~~h 169 (464)
...-...+.+.+.++...+|+|+ .+.+-.-. .-+.....+-+++...
T Consensus 126 ----------GGlS~at~~~i~~ldAaG~DvIIVETVGvGQsev~I~~~aDt~~~v~~p 174 (323)
T COG1703 126 ----------GGLSRATREAIKLLDAAGYDVIIVETVGVGQSEVDIANMADTFLVVMIP 174 (323)
T ss_pred ----------hhhhHHHHHHHHHHHhcCCCEEEEEecCCCcchhHHhhhcceEEEEecC
Confidence 11223455666778889999776 34442211 1155566665555544
|
|
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=80.11 E-value=1.4 Score=34.74 Aligned_cols=44 Identities=18% Similarity=0.027 Sum_probs=29.6
Q ss_pred hHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCC
Q 012436 347 RDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGP 390 (464)
Q Consensus 347 ~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~ 390 (464)
+++.+++..+|++|--|..+..--.+-.++.+|+|+|..-+|..
T Consensus 59 ~~l~~~~~~~DVvIDfT~p~~~~~~~~~~~~~g~~~ViGTTG~~ 102 (124)
T PF01113_consen 59 DDLEELLEEADVVIDFTNPDAVYDNLEYALKHGVPLVIGTTGFS 102 (124)
T ss_dssp S-HHHHTTH-SEEEEES-HHHHHHHHHHHHHHT-EEEEE-SSSH
T ss_pred hhHHHhcccCCEEEEcCChHHhHHHHHHHHhCCCCEEEECCCCC
Confidence 67888898999999877655544456778889999998766643
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 464 | ||||
| 2x6q_A | 416 | Crystal Structure Of Trehalose Synthase Tret From P | 2e-04 | ||
| 2f9f_A | 177 | Crystal Structure Of The Putative Mannosyl Transfer | 7e-04 | ||
| 2xmp_A | 416 | Crystal Structure Of Trehalose Synthase Tret Mutant | 8e-04 | ||
| 2bfw_A | 200 | Structure Of The C Domain Of Glycogen Synthase From | 9e-04 |
| >pdb|2X6Q|A Chain A, Crystal Structure Of Trehalose Synthase Tret From P. Horikoshi Length = 416 | Back alignment and structure |
|
| >pdb|2F9F|A Chain A, Crystal Structure Of The Putative Mannosyl Transferase (Wbaz-1)from Archaeoglobus Fulgidus, Northeast Structural Genomics Target Gr29a Length = 177 | Back alignment and structure |
|
| >pdb|2XMP|A Chain A, Crystal Structure Of Trehalose Synthase Tret Mutant E326a From P.Horishiki In Complex With Udp Length = 416 | Back alignment and structure |
|
| >pdb|2BFW|A Chain A, Structure Of The C Domain Of Glycogen Synthase From Pyrococcus Abyssi Length = 200 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Length = 177 | Back alignment and structure |
|---|
Score = 99.2 bits (248), Expect = 1e-24
Identities = 52/198 (26%), Positives = 78/198 (39%), Gaps = 28/198 (14%)
Query: 247 KRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPR 306
P +TS + +SV + PEK LQLE F L +
Sbjct: 6 HHHSHPVETSKFKFKCYG-----DFWLSVNRIYPEKRIELQLEVF--------KKLQDEK 52
Query: 307 LQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDE 366
L VG ER + I NV+F ++ +L+ L + + DE
Sbjct: 53 LYIVGWFSKGDHAERYA----RKIMKIAPDNVKFLGSVSEEELIDLYSRCKGLLCTAKDE 108
Query: 367 HFGISVVEYMAAGAIP-IAHNSAGPKMDIVLEEDGQQTGFLA-QNAEEYADAIVKIISMP 424
FG++ +E MA+G P IA N G K + V + +TG+L + E DA+ K+ P
Sbjct: 109 DFGLTPIEAMASG-KPVIAVNEGGFK-ETV--INE-KTGYLVNADVNEIIDAMKKVSKNP 163
Query: 425 ETERLEMAAAARRRAARF 442
+ + RRA F
Sbjct: 164 D----KFKKDCFRRAKEF 177
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Length = 166 | Back alignment and structure |
|---|
Score = 94.5 bits (236), Expect = 4e-23
Identities = 31/175 (17%), Positives = 67/175 (38%), Gaps = 17/175 (9%)
Query: 272 IISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIE 331
I V ++ EK + ++A +++ K D L G + +K + +
Sbjct: 5 IAMVGRYSNEKNQSVLIKAVALSKYKQDI-----VLLLKG------KGPDEKKIKLLAQK 53
Query: 332 LKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPK 391
L V F +L+++L + +H+ E I+ +E ++ G +P+ NS
Sbjct: 54 LGVKAEFGFVN---SNELLEILKTCTLYVHAANVESEAIACLEAISVGIVPVIANSPLSA 110
Query: 392 MDIVLEEDGQQTGFLAQNAEEYADAIVKIISMPETERLEMAAAARRRAARFSEQR 446
++ + F NA++ + I + ER M + A ++ +
Sbjct: 111 TRQFALDER--SLFEPNNAKDLSAKIDWWLENKL-ERERMQNEYAKSALNYTLEN 162
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Length = 438 | Back alignment and structure |
|---|
Score = 92.8 bits (231), Expect = 1e-20
Identities = 50/258 (19%), Positives = 86/258 (33%), Gaps = 22/258 (8%)
Query: 199 WLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYP------ 251
+ + AD+ VN+ + + PDRI V P
Sbjct: 162 YRDDSDTPESEARRICEQQLVDNADVLAVNTQEEMQDLMHHYDADPDRISVVSPGADVEL 221
Query: 252 --PCDTSGLQVLP--LERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRL 307
P + + L + V + +P K + ++A L P L
Sbjct: 222 YSPGNDRATERSRRELGIPLHTKVVAFVGRLQPFKGPQVLIKAV----AALFDRDPDRNL 277
Query: 308 QFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEH 367
+ + + + + EL V+ + F +LV + A + +E
Sbjct: 278 RVIICGGPSGPNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADIVAVPSFNES 337
Query: 368 FGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFL--AQNAEEYADAIVKIISMPE 425
FG+ +E A+G IA G V +G+ TG L + +ADA+ ++ E
Sbjct: 338 FGLVAMEAQASGTPVIAARVGGLP-IAV--AEGE-TGLLVDGHSPHAWADALATLLDDDE 393
Query: 426 TERLEMAAAARRRAARFS 443
R+ M A A FS
Sbjct: 394 -TRIRMGEDAVEHARTFS 410
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394 | Back alignment and structure |
|---|
Score = 90.4 bits (225), Expect = 7e-20
Identities = 45/247 (18%), Positives = 90/247 (36%), Gaps = 28/247 (11%)
Query: 210 FFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLER---- 265
+ + +D+ S + +L I+ VY D + +
Sbjct: 145 SLNNLIRFGIEQSDVVTAVSHSLINETHELVKPNKDIQTVYNFIDERVYFKRDMTQLKKE 204
Query: 266 ---STEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERL 322
S +I ++ FR K ++AF+ + ++DA +L VG D
Sbjct: 205 YGISESEKILIHISNFRKVKRVQDVVQAFAKIVTEVDA-----KLLLVG------DGPEF 253
Query: 323 QSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIP 382
++ L ++ V F ++ +LL + + + E FG+ ++E MA G
Sbjct: 254 CTILQLVKNLHIEDRVLFLGKQ--DNVAELLAMSDLMLLLSEKESFGLVLLEAMACGVPC 311
Query: 383 IAHNSAGPKMDIVLEEDGQQTGFLA--QNAEEYADAIVKIISMPETERLEMAAAARRRA- 439
I G +++ + G TG+L + AD ++++ E M AR
Sbjct: 312 IGTRVGGIP-EVI--QHG-DTGYLCEVGDTTGVADQAIQLLKDEE-LHRNMGERARESVY 366
Query: 440 ARFSEQR 446
+F ++
Sbjct: 367 EQFRSEK 373
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416 | Back alignment and structure |
|---|
Score = 88.6 bits (220), Expect = 3e-19
Identities = 46/191 (24%), Positives = 78/191 (40%), Gaps = 14/191 (7%)
Query: 270 PAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDE---ERLQSLK 326
P I V++F P K +E + RK+ +P +L VG + E ++L+
Sbjct: 232 PIITQVSRFDPWKGIFDVIEIY----RKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLR 287
Query: 327 DKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHN 386
+ V + R++ + V + I E FG++V E M G I
Sbjct: 288 KIGEDYDVKVLTNL-IGVHAREVNAFQRASDVILQMSIREGFGLTVTEAMWKGKPVIGRA 346
Query: 387 SAGPKMDIVLEEDGQQTGFLAQNAEEYADAIVKIISMPETERLEMAAAARRRA-ARFSEQ 445
G K + DG+ TGFL ++A E + ++ ++ PE EM A A+ R F
Sbjct: 347 VGGIK-FQI--VDGE-TGFLVRDANEAVEVVLYLLKHPEV-SKEMGAKAKERVRKNFIIT 401
Query: 446 RFYEDFKAAIR 456
+ E + +
Sbjct: 402 KHMERYLDILN 412
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374 | Back alignment and structure |
|---|
Score = 84.7 bits (210), Expect = 5e-18
Identities = 43/242 (17%), Positives = 80/242 (33%), Gaps = 34/242 (14%)
Query: 221 CADLAMVNSSWTQSHIEKLWGIP-DRIKRVYPPCDTSGLQVLPLERSTEY---------- 269
+ M+ + + +K + +R + + P + S E
Sbjct: 136 KSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNGIKEQ 195
Query: 270 -PAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDK 328
++ V K +EA L L L L FV + + ++L +
Sbjct: 196 QNLLLQVGSDFGRKGVDRSIEA----LASLPESLRHNTLLFVVG---QDKPRKFEALAE- 247
Query: 329 SIELKVDGNVEFYKNLLYR-DLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNS 387
+L V NV F R D+ +L+ A + +H E GI ++E + AG +
Sbjct: 248 --KLGVRSNVHF---FSGRNDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAV 302
Query: 388 AGPKMDIVLEEDGQQTGFL---AQNAEEYADAIVKIISMPETERLEMAAAARRRAARFSE 444
G + D G + + E+ + + K ++ R+ A AR A
Sbjct: 303 CGYA-HYI--ADA-NCGTVIAEPFSQEQLNEVLRKALTQSPL-RMAWAENARHYADTQDL 357
Query: 445 QR 446
Sbjct: 358 YS 359
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413 | Back alignment and structure |
|---|
Score = 84.4 bits (208), Expect = 7e-18
Identities = 39/236 (16%), Positives = 66/236 (27%), Gaps = 21/236 (8%)
Query: 225 AMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQF-RPEKA 283
A+ NS + + P +T+ + +R E I+ + A
Sbjct: 198 AVFNSELLKQYFNNKGYNFTDEYFFQPKINTTLKNYINDKRQKE-KIILVYGRPSVKRNA 256
Query: 284 HPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKN 343
L +EA + ++ VG K K I L ++
Sbjct: 257 FTLIVEALK-IFVQKYDRSNEWKIISVGE-------------KHKDIALGKGIHLNSLGK 302
Query: 344 LLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQT 403
L D LL + +GI MI H +E G I N K +
Sbjct: 303 LTLEDYADLLKRSSIGISLMISPHPSYPPLEMAHFGLRVIT-NKYENKDLSNWHSNIVS- 360
Query: 404 GFLAQNAEEYADAIVKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIRPIL 459
N E A+ +V++ ++ + + F I L
Sbjct: 361 -LEQLNPENIAETLVELCMSF--NNRDVDKKESSNMMFYINEFNEFSFIKEIEEKL 413
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394 | Back alignment and structure |
|---|
Score = 82.0 bits (203), Expect = 4e-17
Identities = 53/274 (19%), Positives = 92/274 (33%), Gaps = 38/274 (13%)
Query: 211 FSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLP-------- 262
+G+ D+ S +T + +G + + D
Sbjct: 130 SRQSLRKIGTEVDVLTYISQYTLRRFKSAFGSHPTFEHLPSGVDVKRFTPATPEDKSATR 189
Query: 263 --LERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEE 320
L + P I ++ P K ++A ++ A P +L VGS E
Sbjct: 190 KKLGFTDTTPVIACNSRLVPRKGQDSLIKAM----PQVIAARPDAQLLIVGS---GRYES 242
Query: 321 RLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGA-------VVGIHSMIDEHFGISVV 373
L+ L V NV+F L Y+D++ L A + E GI +
Sbjct: 243 TLRRL-----ATDVSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYL 297
Query: 374 EYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFL--AQNAEEYADAIVKIISMPETERLEM 431
E A G IA S G + V TG + + ++ ++ +++++ P R M
Sbjct: 298 EAQACGVPVIAGTSGGAP-ETV--TPA--TGLVVEGSDVDKLSELLIELLDDPI-RRAAM 351
Query: 432 AAAARRRA-ARFSEQRFYEDFKAAIRPILCHAAR 464
AA R A +S + E ++ A
Sbjct: 352 GAAGRAHVEAEWSWEIMGERLTNILQSEPRKLAA 385
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Length = 816 | Back alignment and structure |
|---|
Score = 68.1 bits (166), Expect = 3e-12
Identities = 42/212 (19%), Positives = 81/212 (38%), Gaps = 28/212 (13%)
Query: 249 VYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQ 308
+Y + + L + + + P + ++A+ K +E + +L L
Sbjct: 554 LYSDVENK--EHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYG-KNTRLR---ELANLV 607
Query: 309 FVGSCR---NKSDEER--LQSLKDKSIELKVDGNVEFYKNLLYRDLV-----KLLGGAVV 358
VG R +K +EE+ ++ + D E K++G + + + R +
Sbjct: 608 VVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGA 667
Query: 359 GIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFL------AQNAEE 412
+ + E FG++VVE M G A GP +I+ G ++GF Q A+
Sbjct: 668 FVQPALYEAFGLTVVEAMTCGLPTFATCKGGPA-EII--VHG-KSGFHIDPYHGDQAADT 723
Query: 413 YADAIVKIISMPETERLEMAAAARRRAAR-FS 443
AD K P E++ +R ++
Sbjct: 724 LADFFTKCKEDPSH-WDEISKGGLQRIEEKYT 754
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Length = 406 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 1e-11
Identities = 41/168 (24%), Positives = 65/168 (38%), Gaps = 21/168 (12%)
Query: 279 RPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNV 338
P K + L A KL A P + VG + DE+ L+ + G++
Sbjct: 219 EPRKGMAVLLAAL----PKLVARFPDVEILIVG----RGDEDELREQ-----AGDLAGHL 265
Query: 339 EFYKNLLYRDLVKLLGGA-VVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLE 397
F + + A V + E FGI +VE MAAG +A + + ++
Sbjct: 266 RFLGQVDDATKASAMRSADVYCAPHLGGESFGIVLVEAMAAGTAVVASDLDAFR-RVL-- 322
Query: 398 EDGQQTGFL--AQNAEEYADAIVKIISMPETERLEMAAAARRRAARFS 443
DG G L +A+ A A++ I+ + R A A R R+
Sbjct: 323 ADGD-AGRLVPVDDADGMAAALIGILEDDQ-LRAGYVARASERVHRYD 368
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Length = 499 | Back alignment and structure |
|---|
Score = 63.2 bits (154), Expect = 7e-11
Identities = 37/191 (19%), Positives = 73/191 (38%), Gaps = 26/191 (13%)
Query: 270 PAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCR----------NKSDE 319
PAII+ ++ +K H +EA+ ++L + L + ++
Sbjct: 263 PAIIASSRLDQKKNHYGLVEAYV-QNKELQ---DKANLVLTLRGIENPFEDYSRAGQEEK 318
Query: 320 ERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKL----LGGAVVGIHSMIDEHFGISVVEY 375
E L + + G V + ++L V + E FG++ VE
Sbjct: 319 EILGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEA 378
Query: 376 MAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLA--QNAEEYADAIVKIISMPETERLEMAA 433
MA+G + + GP +I+ + G + G L ++ E+ A ++K ET
Sbjct: 379 MASGLPAVVTRNGGPA-EIL--DGG-KYGVLVDPEDPEDIARGLLKAFESEET-WSAYQE 433
Query: 434 AARRRAA-RFS 443
++R R++
Sbjct: 434 KGKQRVEERYT 444
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Length = 342 | Back alignment and structure |
|---|
Score = 61.3 bits (149), Expect = 2e-10
Identities = 36/248 (14%), Positives = 66/248 (26%), Gaps = 42/248 (16%)
Query: 223 DLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEK 282
+ SS Q G D + P D + + + + E ++ + + P K
Sbjct: 120 PVGCTYSSRAQRA---HCGGGDDAPVIPIPVDPARYRSAADQVAKE-DFLLFMGRVSPHK 175
Query: 283 AHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYK 342
A RL G + E I + VE
Sbjct: 176 GALEAAAF---------AHACGRRLVLAGPA---WEPEYFDE-----ITRRYGSTVEPIG 218
Query: 343 NLLYRDLVKLLGGAVVGIH----------SMIDEHFGISVVEYMAAGAIPIAHNSAGPKM 392
+ + LL A + + E V E +G + + +
Sbjct: 219 EVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGC--L 276
Query: 393 DIVLEEDGQQTGFLAQNAEEYADAIVKIISMPETERLEMAAAARRRA-ARFSEQRFYEDF 451
++ G+ G+ A + A + L + RR A + E +
Sbjct: 277 AEIVPSVGEVVGYGTDFAPDEARRTL--------AGLPASDEVRRAAVRLWGHVTIAERY 328
Query: 452 KAAIRPIL 459
R +L
Sbjct: 329 VEQYRRLL 336
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Length = 413 | Back alignment and structure |
|---|
Score = 56.7 bits (136), Expect = 6e-09
Identities = 38/308 (12%), Positives = 81/308 (26%), Gaps = 43/308 (13%)
Query: 187 MYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVG-------SCADLAMVNSSWTQSHIEKL 239
+ N +A + KIV Y M S S I
Sbjct: 92 IVIGNYLLAMGKCSHRTKIVLYVDLVSKNIRENLWWIFSHPKVVGVMAMSKCWISDI-CN 150
Query: 240 WGIPDRIKRVYPPCDTSGLQVLP----LERSTEYPAIISVAQFRPEKAHPLQLEAFSVAL 295
+G I V DT + L + +++ + K + + A
Sbjct: 151 YGCKVPINIVSHFVDTKTIYDARKLVGLSEYNDDVLFLNMNRNTARKRLDIYVLAA---- 206
Query: 296 RKLDADLPRPRLQFVGSCRNKS------DEERLQSLKDKSIELKVDGNVEFYKNLLYR-D 348
+ + P +++F+ + ++S R + + +L
Sbjct: 207 ARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDER 266
Query: 349 LVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDG-------- 400
+ + V ++ E FG+ E G P+ ++ G D +
Sbjct: 267 VDMMYNACDVIVNCSSGEGFGLCSAEGAVLG-KPLIISAVGGADDYFSGDCVYKIKPSAW 325
Query: 401 ------QQTGFLAQ--NAEEYADAIVKIISMPETERLEMAAAARRRAA-RFSEQRFYEDF 451
G + + ++ +A + R E + + + D
Sbjct: 326 ISVDDRDGIGGIEGIIDVDDLVEAF-TFFKDEK-NRKEYGKRVQDFVKTKPTWDDISSDI 383
Query: 452 KAAIRPIL 459
+L
Sbjct: 384 IDFFNSLL 391
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* Length = 725 | Back alignment and structure |
|---|
Score = 55.6 bits (133), Expect = 2e-08
Identities = 17/124 (13%), Positives = 39/124 (31%), Gaps = 12/124 (9%)
Query: 351 KLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGF----- 405
+ + G +G+ E +G + E G I N +G + + Q
Sbjct: 514 EFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSGFGSYMEDLIETNQAKDYGIYI 573
Query: 406 -------LAQNAEEYADAIVKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIRPI 458
++ E+ D + + + +R+ A + +R ++ A +
Sbjct: 574 VDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSDLLDWKRMGLEYVKARQLA 633
Query: 459 LCHA 462
L
Sbjct: 634 LRRG 637
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 42.1 bits (98), Expect = 4e-04
Identities = 45/346 (13%), Positives = 96/346 (27%), Gaps = 71/346 (20%)
Query: 47 GGGGERVLWCAVKAIQEESPD--LDCIVY--TGDHDAFPDSLLARAVD---RFGVELLHP 99
G G+ + A+ +D ++ + P+++L +
Sbjct: 159 LGSGKTWV--ALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSR 216
Query: 100 PKVVHLYRRKWIEESTYPRFTMIGQSFGSVYL---------SWEALCKFTPLYYFDTSGY 150
+ + R + + + + L +W A F+
Sbjct: 217 SDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNA---------FN---- 263
Query: 151 AFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTF 210
C+++ T + ++ + + S+ +++ ++ S
Sbjct: 264 ---------LSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSL-------L 307
Query: 211 FSWMYGLVGSCADL---AMVNSSWTQSHI-EKLWGIPDRIKRV-YPPCDTSGLQVLPLER 265
+ L DL + + S I E + + CD L
Sbjct: 308 LKY---LDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDK-------LTT 357
Query: 266 STEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEER-LQS 324
E S+ P + + + SV A +P L + KSD +
Sbjct: 358 IIE----SSLNVLEPAEYRKM-FDRLSV-FPP-SAHIPTILLSLIWFDVIKSDVMVVVNK 410
Query: 325 LKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGI 370
L S+ K +Y +L L +H I +H+ I
Sbjct: 411 LHKYSLVEKQPKESTISIPSIYLELKVKLENEYA-LHRSIVDHYNI 455
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 464 | |||
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 100.0 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 100.0 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 100.0 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 100.0 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 100.0 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 100.0 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 100.0 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 100.0 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 100.0 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 100.0 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 100.0 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 100.0 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 100.0 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 100.0 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 100.0 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 100.0 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 100.0 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 100.0 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.97 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.97 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 99.96 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 99.96 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 99.96 | |
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 99.95 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 99.95 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 99.95 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.94 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 99.93 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 99.91 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 99.9 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 99.9 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.88 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.88 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 99.84 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 99.83 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 99.79 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 99.78 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 99.76 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 99.74 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 99.72 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 99.72 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 99.68 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 99.65 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 99.62 | |
| 4amg_A | 400 | Snogd; transferase, polyketide biosynthesis, GT1 f | 99.5 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 99.43 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 99.39 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 99.35 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 99.24 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 99.22 | |
| 1l5w_A | 796 | Maltodextrin phosphorylase; enzymatic catalysis, s | 99.14 | |
| 2gj4_A | 824 | Glycogen phosphorylase, muscle form; transferase; | 98.84 | |
| 2c4m_A | 796 | Glycogen phosphorylase; allosteric control, phosph | 98.84 | |
| 2c1x_A | 456 | UDP-glucose flavonoid 3-O glycosyltransferase; WIN | 98.71 | |
| 3hbm_A | 282 | UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je | 98.66 | |
| 3hbf_A | 454 | Flavonoid 3-O-glucosyltransferase; glycosyltransfe | 98.63 | |
| 2pq6_A | 482 | UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl | 98.59 | |
| 2acv_A | 463 | Triterpene UDP-glucosyl transferase UGT71G1; glyco | 98.51 | |
| 2vch_A | 480 | Hydroquinone glucosyltransferase; glycosyltransfer | 98.28 | |
| 1psw_A | 348 | ADP-heptose LPS heptosyltransferase II; structural | 98.12 | |
| 2gt1_A | 326 | Lipopolysaccharide heptosyltransferase-1; GT-B fol | 98.11 | |
| 3l7i_A | 729 | Teichoic acid biosynthesis protein F; GT-B fold, m | 98.08 | |
| 3tov_A | 349 | Glycosyl transferase family 9; structural genomics | 97.99 | |
| 2jzc_A | 224 | UDP-N-acetylglucosamine transferase subunit ALG13; | 96.58 | |
| 1ygp_A | 879 | Yeast glycogen phosphorylase; phosphorylated form, | 96.28 | |
| 3lkv_A | 302 | Uncharacterized conserved domain protein; ATPase b | 90.15 | |
| 1xv5_A | 401 | AGT, DNA alpha-glucosyltransferase; HET: DNA CME U | 87.07 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 82.24 | |
| 3ty2_A | 261 | 5'-nucleotidase SURE; surviVal protein, phosphatas | 80.7 | |
| 3miz_A | 301 | Putative transcriptional regulator protein, LACI f | 80.62 | |
| 1k68_A | 140 | Phytochrome response regulator RCPA; phosphorylate | 80.18 |
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-44 Score=345.67 Aligned_cols=358 Identities=17% Similarity=0.202 Sum_probs=275.9
Q ss_pred cccceEEEecCCCCCC-CCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeecccc
Q 012436 32 NRTTSVAFFHPNTNDG-GGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKW 110 (464)
Q Consensus 32 ~~~mkI~~~~~~~~~~-GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (464)
+++|||+++++.+++. ||+++++.+++++| .|| +|.+++.... ...........++ .++.++....
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~--~v~v~~~~~~---~~~~~~~~~~~~~------~~~~~~~~~~ 68 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPE--SIVVFASTQN---AEEAHAYDKTLDY------EVIRWPRSVM 68 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGG--GEEEEEECSS---HHHHHHHHTTCSS------EEEEESSSSC
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh--cCC--eEEEEECCCC---ccchhhhccccce------EEEEcccccc
Confidence 5679999999866544 89999999999999 574 5555554321 1111222222222 4444443221
Q ss_pred cccccCcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccch--hhhccCce-EEEEeeCCcchhhhhhcccccccc
Q 012436 111 IEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LARIFGCR-VICYTHYPTISLDMISRVREGSSM 187 (464)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~--~~~~~~~p-~v~~~h~p~~~~~~~~~~~~~~~~ 187 (464)
. ........+.+.+++.+||+||.+........ +++..++| +|++.|....
T Consensus 69 ~------------~~~~~~~~l~~~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~-------------- 122 (394)
T 3okp_A 69 L------------PTPTTAHAMAEIIREREIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEV-------------- 122 (394)
T ss_dssp C------------SCHHHHHHHHHHHHHTTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHH--------------
T ss_pred c------------cchhhHHHHHHHHHhcCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchh--------------
Confidence 1 11234556677788999999997665444332 55567886 7778884321
Q ss_pred cCCCcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCCCC---
Q 012436 188 YNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLE--- 264 (464)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~~~--- 264 (464)
............+.+++.+|.++++|+..++.+.+.++...++.++|||+|.+.+.+....
T Consensus 123 ----------------~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~ 186 (394)
T 3okp_A 123 ----------------GWSMLPGSRQSLRKIGTEVDVLTYISQYTLRRFKSAFGSHPTFEHLPSGVDVKRFTPATPEDKS 186 (394)
T ss_dssp ----------------HHTTSHHHHHHHHHHHHHCSEEEESCHHHHHHHHHHHCSSSEEEECCCCBCTTTSCCCCHHHHH
T ss_pred ----------------hhhhcchhhHHHHHHHHhCCEEEEcCHHHHHHHHHhcCCCCCeEEecCCcCHHHcCCCCchhhH
Confidence 0001112233456777999999999999999999988777899999999999877642111
Q ss_pred -------CCCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCc
Q 012436 265 -------RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGN 337 (464)
Q Consensus 265 -------~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~ 337 (464)
..++.++++|+|++.+.||++.+++|++.+.++. |+++|+++|+++.. +.+++++ .++.++
T Consensus 187 ~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~----~~~~l~i~G~g~~~------~~l~~~~--~~~~~~ 254 (394)
T 3okp_A 187 ATRKKLGFTDTTPVIACNSRLVPRKGQDSLIKAMPQVIAAR----PDAQLLIVGSGRYE------STLRRLA--TDVSQN 254 (394)
T ss_dssp HHHHHTTCCTTCCEEEEESCSCGGGCHHHHHHHHHHHHHHS----TTCEEEEECCCTTH------HHHHHHT--GGGGGG
T ss_pred HHHHhcCCCcCceEEEEEeccccccCHHHHHHHHHHHHhhC----CCeEEEEEcCchHH------HHHHHHH--hcccCe
Confidence 1345589999999999999999999999998876 69999999998643 6677776 455689
Q ss_pred EEEccCCChhHHHHHHhcCcEEEEcCCC-------CCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC--
Q 012436 338 VEFYKNLLYRDLVKLLGGAVVGIHSMID-------EHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ-- 408 (464)
Q Consensus 338 v~~~g~~~~~~~~~~l~~ad~~v~ps~~-------e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~-- 408 (464)
|.++|+++++++.++|+.||++|+||.. |++|++++|||++|+|||+++.++. .+++.+ + +|++++
T Consensus 255 v~~~g~~~~~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~-~e~i~~---~-~g~~~~~~ 329 (394)
T 3okp_A 255 VKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGA-PETVTP---A-TGLVVEGS 329 (394)
T ss_dssp EEEEESCCHHHHHHHHHHCSEEEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTTG-GGGCCT---T-TEEECCTT
T ss_pred EEEcCCCCHHHHHHHHHhCCEEEecCccccccccccccCcHHHHHHHcCCCEEEeCCCCh-HHHHhc---C-CceEeCCC
Confidence 9999999999999999999999999998 9999999999999999999999988 788888 7 999987
Q ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-HccCHHHHHHHHHHHHHHHHhhc
Q 012436 409 NAEEYADAIVKIISMPETERLEMAAAARRRA-ARFSEQRFYEDFKAAIRPILCHA 462 (464)
Q Consensus 409 ~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~ 462 (464)
|+++++++|.++++ |++.++++++++++.+ ++|+|+.+++++.++|+++.+++
T Consensus 330 d~~~l~~~i~~l~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~r~~ 383 (394)
T 3okp_A 330 DVDKLSELLIELLD-DPIRRAAMGAAGRAHVEAEWSWEIMGERLTNILQSEPRKL 383 (394)
T ss_dssp CHHHHHHHHHHHHT-CHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHSCCC--
T ss_pred CHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhccCc
Confidence 99999999999999 9999999999999999 78999999999999999877543
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=349.26 Aligned_cols=389 Identities=16% Similarity=0.139 Sum_probs=275.0
Q ss_pred cccccceEEEecCCCCC--------CCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCce
Q 012436 30 RRNRTTSVAFFHPNTND--------GGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPK 101 (464)
Q Consensus 30 ~~~~~mkI~~~~~~~~~--------~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (464)
..+++|||+++++.+.+ .||+++++.+++++|.+.||+|+ +++......... ......+++
T Consensus 16 ~~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~--v~~~~~~~~~~~---------~~~~~~~v~ 84 (438)
T 3c48_A 16 PRGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVD--IYTRATRPSQGE---------IVRVAENLR 84 (438)
T ss_dssp ---CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEE--EEEECCCGGGCS---------EEEEETTEE
T ss_pred cCcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEE--EEecCCCCCCcc---------cccccCCeE
Confidence 34577999999976543 38999999999999999995555 444332100000 001112334
Q ss_pred eeeeecccccccccCcceehhhhchhhhHHHHHH-hhhc-CCcEEEecccccccch--hhhccCceEEEEeeCCcchhhh
Q 012436 102 VVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEA-LCKF-TPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTISLDM 177 (464)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~-~~Dvv~~~~~~~~~~~--~~~~~~~p~v~~~h~p~~~~~~ 177 (464)
++.++...+........+..+ ........+. +++. +||+||.+........ +++..++|+|+++|........
T Consensus 85 v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~ 161 (438)
T 3c48_A 85 VINIAAGPYEGLSKEELPTQL---AAFTGGMLSFTRREKVTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVKNS 161 (438)
T ss_dssp EEEECCSCSSSCCGGGGGGGH---HHHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHHHHSC
T ss_pred EEEecCCCccccchhHHHHHH---HHHHHHHHHHHHhccCCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCcccccc
Confidence 554443221100000000000 1111122233 4433 4999997754332222 4557799999999954210000
Q ss_pred hhcccccccccCCCcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCC-CCCeEEecCCCCCC
Q 012436 178 ISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTS 256 (464)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~-~~~i~~i~~~~d~~ 256 (464)
. + ...... .......+++.+++.+|.++++|+..++.+.+.++. ..++.++|||+|.+
T Consensus 162 --~-------~---------~~~~~~---~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~g~~~~k~~vi~ngvd~~ 220 (438)
T 3c48_A 162 --Y-------R---------DDSDTP---ESEARRICEQQLVDNADVLAVNTQEEMQDLMHHYDADPDRISVVSPGADVE 220 (438)
T ss_dssp --C--------------------CCH---HHHHHHHHHHHHHHHCSEEEESSHHHHHHHHHHHCCCGGGEEECCCCCCTT
T ss_pred --c-------c---------cccCCc---chHHHHHHHHHHHhcCCEEEEcCHHHHHHHHHHhCCChhheEEecCCcccc
Confidence 0 0 000000 011223456778899999999999999999987776 57899999999988
Q ss_pred CCccCCCCC----------CCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHH
Q 012436 257 GLQVLPLER----------STEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLK 326 (464)
Q Consensus 257 ~~~~~~~~~----------~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~ 326 (464)
.+.+.+... .++.++++|+|++.+.||++.+++|+..+.++.++ .+++|+++|+.... ..+.++++
T Consensus 221 ~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~--~~~~l~i~G~~~~~--g~~~~~l~ 296 (438)
T 3c48_A 221 LYSPGNDRATERSRRELGIPLHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPD--RNLRVIICGGPSGP--NATPDTYR 296 (438)
T ss_dssp TSCCC----CHHHHHHTTCCSSSEEEEEESCBSGGGCHHHHHHHHHHHHHHCTT--CSEEEEEECCBC--------CHHH
T ss_pred ccCCcccchhhhhHHhcCCCCCCcEEEEEeeecccCCHHHHHHHHHHHHhhCCC--cceEEEEEeCCCCC--CcHHHHHH
Confidence 776432211 24568999999999999999999999999887511 27999999982110 02347889
Q ss_pred HHHHhcCCCCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceee
Q 012436 327 DKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFL 406 (464)
Q Consensus 327 ~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~ 406 (464)
++++++++.++|.|+|+++++++.++|+.||++|+||..|++|++++|||++|+|||+++.++. .+++.+ +.+|++
T Consensus 297 ~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~-~e~i~~---~~~g~~ 372 (438)
T 3c48_A 297 HMAEELGVEKRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAARVGGL-PIAVAE---GETGLL 372 (438)
T ss_dssp HHHHHTTCTTTEEEECCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHHTTCCEEEESCTTH-HHHSCB---TTTEEE
T ss_pred HHHHHcCCCCcEEEcCCCChHHHHHHHHhCCEEEECccccCCchHHHHHHHcCCCEEecCCCCh-hHHhhC---CCcEEE
Confidence 9999999999999999999999999999999999999999999999999999999999999988 788888 889998
Q ss_pred cC--CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhhc
Q 012436 407 AQ--NAEEYADAIVKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIRPILCHA 462 (464)
Q Consensus 407 ~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 462 (464)
++ |+++++++|.++++ |++.++++++++++.+++|+|+.+++++.++|++++.++
T Consensus 373 ~~~~d~~~la~~i~~l~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 429 (438)
T 3c48_A 373 VDGHSPHAWADALATLLD-DDETRIRMGEDAVEHARTFSWAATAAQLSSLYNDAIANE 429 (438)
T ss_dssp ESSCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhc
Confidence 86 99999999999999 999999999999999944999999999999999998764
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-43 Score=353.69 Aligned_cols=398 Identities=17% Similarity=0.114 Sum_probs=282.5
Q ss_pred ccceEEEecCCCCC------------CCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCccc--CC
Q 012436 33 RTTSVAFFHPNTND------------GGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVEL--LH 98 (464)
Q Consensus 33 ~~mkI~~~~~~~~~------------~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 98 (464)
++|||+++++.+.+ .||+++++.+++++|.+.||+|+|++...... ....+.+.. ..+ ..
T Consensus 6 ~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~-~~~~~~~~~-----~~~~~~~ 79 (499)
T 2r60_A 6 RIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDE-NWPEFSGEI-----DYYQETN 79 (499)
T ss_dssp -CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBT-TBGGGCCSE-----EECTTCS
T ss_pred ccceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcc-cccchhhhH-----HhccCCC
Confidence 46999999875432 38999999999999999995555444332210 001100000 001 12
Q ss_pred CceeeeeecccccccccCcceehhhhchhhhHHHHHHhhh--cCCcEEEecccccccch--hhhccCceEEEEeeCCcch
Q 012436 99 PPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCK--FTPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTIS 174 (464)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~Dvv~~~~~~~~~~~--~~~~~~~p~v~~~h~p~~~ 174 (464)
+++++.++...... .+..............+.+.+++ .+||+||.+........ +++..++|+|+++|.....
T Consensus 80 gv~v~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~~~~~~Divh~~~~~~~~~~~~~~~~~~~p~v~~~H~~~~~ 156 (499)
T 2r60_A 80 KVRIVRIPFGGDKF---LPKEELWPYLHEYVNKIINFYREEGKFPQVVTTHYGDGGLAGVLLKNIKGLPFTFTGHSLGAQ 156 (499)
T ss_dssp SEEEEEECCSCSSC---CCGGGCGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHCCCEEEECSSCHHH
T ss_pred CeEEEEecCCCcCC---cCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEcCCcchHHHHHHHHhcCCcEEEEccCcccc
Confidence 33555544321100 00000000001112345556666 58999998765433322 4557799999999953210
Q ss_pred hhhhhcccccccccCCCcccccchhh-hHHHHHH-HHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHH--hC------CCC
Q 012436 175 LDMISRVREGSSMYNNNASIAQSNWL-SQCKIVY-YTFFSWMYGLVGSCADLAMVNSSWTQSHIEKL--WG------IPD 244 (464)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~--~~------~~~ 244 (464)
.. .... . ..+. ......+ .....++++.+++.+|.++++|+..++.+.+. ++ ...
T Consensus 157 ~~--~~~~-------~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~g~~~~~~~~~ 221 (499)
T 2r60_A 157 KM--EKLN-------V------NTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYSHDLYRGAVNVEDDD 221 (499)
T ss_dssp HH--HTTC-------C------CSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESSHHHHHHTTTSGGGTTTCCTTCGG
T ss_pred cc--hhhc-------c------CCCCcchhhhhHHHHHHHHHHHHHHhcCCEEEECCHHHHHHHHhhhcccccccccCCC
Confidence 00 0000 0 0000 0011111 11223456788899999999999999998887 66 457
Q ss_pred CeEEecCCCCCCCCccCCCC----------------CCCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEE
Q 012436 245 RIKRVYPPCDTSGLQVLPLE----------------RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQ 308 (464)
Q Consensus 245 ~i~~i~~~~d~~~~~~~~~~----------------~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~ 308 (464)
++.+||||+|.+.+.+.... ..++.++|+|+|++.+.||++.+++|+..+.++..+ .++++
T Consensus 222 ki~vi~ngvd~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~---~~~l~ 298 (499)
T 2r60_A 222 KFSVIPPGVNTRVFDGEYGDKIKAKITKYLERDLGSERMELPAIIASSRLDQKKNHYGLVEAYVQNKELQDK---ANLVL 298 (499)
T ss_dssp GEEECCCCBCTTTSSSCCCHHHHHHHHHHHHHHSCGGGTTSCEEEECSCCCGGGCHHHHHHHHHTCHHHHHH---CEEEE
T ss_pred CeEEECCCcChhhcCccchhhhHHHHHHHhcccccccCCCCcEEEEeecCccccCHHHHHHHHHHHHHhCCC---ceEEE
Confidence 89999999998877643220 234568999999999999999999999998776421 46899
Q ss_pred EEcCCCCC---------ccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHHHhcC----cEEEEcCCCCCCChHHHHH
Q 012436 309 FVGSCRNK---------SDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGA----VVGIHSMIDEHFGISVVEY 375 (464)
Q Consensus 309 i~G~~~~~---------~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~a----d~~v~ps~~e~~~~~~~Ea 375 (464)
|+|+.+.. ++.+|.++++++++++++.++|.|+|+++++++.++|+.| |++|+||..|+||++++||
T Consensus 299 i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEA 378 (499)
T 2r60_A 299 TLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEA 378 (499)
T ss_dssp EESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHH
T ss_pred EECCCCCcccccccccccchHHHHHHHHHHHhcCCCceEEECCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHH
Confidence 99983221 1234478999999999999999999999999999999999 9999999999999999999
Q ss_pred HHhCCcEEEeCCCCCccceecccCCccceeecC--CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-HccCHHHHHHHHH
Q 012436 376 MAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ--NAEEYADAIVKIISMPETERLEMAAAARRRA-ARFSEQRFYEDFK 452 (464)
Q Consensus 376 ~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~ 452 (464)
|+||+|||+|+.+|. .|++.+ +.+|++++ |+++++++|.++++ |++.++++++++++.+ ++|||+.+++++.
T Consensus 379 ma~G~PvI~s~~~g~-~e~v~~---~~~g~l~~~~d~~~la~~i~~ll~-~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~ 453 (499)
T 2r60_A 379 MASGLPAVVTRNGGP-AEILDG---GKYGVLVDPEDPEDIARGLLKAFE-SEETWSAYQEKGKQRVEERYTWQETARGYL 453 (499)
T ss_dssp HHTTCCEEEESSBHH-HHHTGG---GTSSEEECTTCHHHHHHHHHHHHS-CHHHHHHHHHHHHHHHHHHSBHHHHHHHHH
T ss_pred HHcCCCEEEecCCCH-HHHhcC---CceEEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 999999999999888 788888 78999986 99999999999999 9999999999999999 6799999999999
Q ss_pred HHHHHHHhhc
Q 012436 453 AAIRPILCHA 462 (464)
Q Consensus 453 ~~~~~~~~~~ 462 (464)
++|++++..+
T Consensus 454 ~~y~~~~~~~ 463 (499)
T 2r60_A 454 EVIQEIADRK 463 (499)
T ss_dssp HHHHHHHHC-
T ss_pred HHHHHHHhhh
Confidence 9999988654
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-43 Score=344.94 Aligned_cols=396 Identities=18% Similarity=0.112 Sum_probs=277.0
Q ss_pred ccceEEEecCCCCC--CCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHH---HHhhcC----cccCCCceee
Q 012436 33 RTTSVAFFHPNTND--GGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLAR---AVDRFG----VELLHPPKVV 103 (464)
Q Consensus 33 ~~mkI~~~~~~~~~--~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~---~~~~~~----~~~~~~~~~~ 103 (464)
++|||+++++.+.+ .||+++++.+++++|.+.|| +|.++++............ ...... .....+++++
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~--~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~ 78 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGH--EVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIY 78 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTC--EEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCC--eEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEE
Confidence 57999999977655 48999999999999999995 4555554321111100000 000000 0012233555
Q ss_pred eeecccccccccCc-ceeh-hhhchhhhHHHHHHhh-----hcCCcEEEecccccccch--hhhccCceEEEEeeCCcch
Q 012436 104 HLYRRKWIEESTYP-RFTM-IGQSFGSVYLSWEALC-----KFTPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTIS 174 (464)
Q Consensus 104 ~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~l~-----~~~~Dvv~~~~~~~~~~~--~~~~~~~p~v~~~h~p~~~ 174 (464)
.++...+.....++ .... ............+.++ ..+||+||++.......+ +++..++|+|+++|.....
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~ 158 (439)
T 3fro_A 79 RIGGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYFKIPAVFTIHRLNKS 158 (439)
T ss_dssp EEESGGGGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHHHCCCEEEEESCCCCC
T ss_pred EecchhccccccccCCcchhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhccCCCEEEEecccccc
Confidence 55541111111111 0000 1111111222222233 559999998866544333 4557899999999954310
Q ss_pred hhhhhcccccccccCCCcccccchhh-hHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCC-CCCeEEecCC
Q 012436 175 LDMISRVREGSSMYNNNASIAQSNWL-SQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPP 252 (464)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~-~~~i~~i~~~ 252 (464)
. .... .+. .............+++..++.+|.++++|+..++.....++. ..++.+||||
T Consensus 159 ~-~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~~~~~~~~i~vi~ng 220 (439)
T 3fro_A 159 K-LPAF-----------------YFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNG 220 (439)
T ss_dssp C-EEHH-----------------HHHHTTCGGGCCSSEECHHHHHHHHCSEEEESCHHHHHHTHHHHGGGTTSEEECCCC
T ss_pred c-CchH-----------------HhCccccccccccceeeHhhhhhhhccEEEecCHHHHHHHhhhhhhcCCceeecCCC
Confidence 0 0000 000 000000000000345777899999999999999886664433 7899999999
Q ss_pred CCCCCCccCCCCC---------------CCCCcEEEEEeccC-CCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCC
Q 012436 253 CDTSGLQVLPLER---------------STEYPAIISVAQFR-PEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNK 316 (464)
Q Consensus 253 ~d~~~~~~~~~~~---------------~~~~~~i~~~G~~~-~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~ 316 (464)
+|.+.+.+..... +++ ++++|+|++. +.||++.+++|++.+.++... |+++|+++|+|+.
T Consensus 221 vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~--~~~~l~i~G~g~~- 296 (439)
T 3fro_A 221 IDCSFWNESYLTGSRDERKKSLLSKFGMDEG-VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEF--QEMRFIIIGKGDP- 296 (439)
T ss_dssp CCTTTSCGGGSCSCHHHHHHHHHHHHTCCSC-EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGG--GGEEEEEECCCCH-
T ss_pred CCchhcCcccccchhhhhHHHHHHHcCCCCC-cEEEEEcccccccccHHHHHHHHHHHHhcccC--CCeEEEEEcCCCh-
Confidence 9998886432110 234 8999999999 999999999999999875411 3899999999862
Q ss_pred ccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceec
Q 012436 317 SDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVL 396 (464)
Q Consensus 317 ~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~ 396 (464)
.+.+.+++++++++ +++.+.|+++.+++.++|+.||++|+||..|++|++++|||+||+|||+|+.++. .+++.
T Consensus 297 ---~~~~~l~~~~~~~~--~~~~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~~~~-~e~~~ 370 (439)
T 3fro_A 297 ---ELEGWARSLEEKHG--NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGL-RDIIT 370 (439)
T ss_dssp ---HHHHHHHHHHHHCT--TEEEECSCCCHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTTCEEEEESSTHH-HHHCC
T ss_pred ---hHHHHHHHHHhhcC--CEEEEcCCCCHHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCCCCeEEcCCCCc-ceeEE
Confidence 45578899999887 6788999999999999999999999999999999999999999999999999988 78887
Q ss_pred ccCCccceeecC--CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhhc
Q 012436 397 EEDGQQTGFLAQ--NAEEYADAIVKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIRPILCHA 462 (464)
Q Consensus 397 ~~~~~~~g~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 462 (464)
+ + +|++++ |+++++++|.+++++|++.++++++++++.+++|||+.+++++.++|++++++.
T Consensus 371 ~---~-~g~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 434 (439)
T 3fro_A 371 N---E-TGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSIDRA 434 (439)
T ss_dssp T---T-TCEEECTTCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCSCCB
T ss_pred c---C-ceEEeCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHhh
Confidence 7 5 998886 999999999999976788999999999999988999999999999999987653
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-42 Score=332.96 Aligned_cols=361 Identities=16% Similarity=0.143 Sum_probs=266.5
Q ss_pred ceEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeecccccccc
Q 012436 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (464)
Q Consensus 35 mkI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (464)
|+.-+...+++..||+++++.+++++|.+.| ++|.+++.... ... . ....++.+..+....+
T Consensus 14 ~~~~~~~~~~p~~GG~~~~~~~la~~L~~~G--~~V~v~~~~~~---~~~-~--------~~~~~i~~~~~~~~~~---- 75 (394)
T 2jjm_A 14 MKLKIGITCYPSVGGSGVVGTELGKQLAERG--HEIHFITSGLP---FRL-N--------KVYPNIYFHEVTVNQY---- 75 (394)
T ss_dssp -CCEEEEECCC--CHHHHHHHHHHHHHHHTT--CEEEEECSSCC----------------CCCTTEEEECCCCC------
T ss_pred heeeeehhcCCCCCCHHHHHHHHHHHHHhCC--CEEEEEeCCCC---Ccc-c--------ccCCceEEEecccccc----
Confidence 4444555555556899999999999999999 56666665421 000 0 0011112222221111
Q ss_pred cCcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccch--hhh-cc--CceEEEEeeCCcchhhhhhcccccccccC
Q 012436 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LAR-IF--GCRVICYTHYPTISLDMISRVREGSSMYN 189 (464)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~--~~~-~~--~~p~v~~~h~p~~~~~~~~~~~~~~~~~~ 189 (464)
+.+......+.....+.+.+++.+||+||.+...+..+. +++ .. ++|+|+++|.... ...
T Consensus 76 --~~~~~~~~~~~~~~~l~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~------~~~------- 140 (394)
T 2jjm_A 76 --SVFQYPPYDLALASKMAEVAQRENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDI------TVL------- 140 (394)
T ss_dssp ----CCSCCHHHHHHHHHHHHHHHHTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHH------HTT-------
T ss_pred --cccccccccHHHHHHHHHHHHHcCCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcc------ccc-------
Confidence 111111111233455667788899999998765543322 333 33 5999999993210 000
Q ss_pred CCcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCCCC-----
Q 012436 190 NNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLE----- 264 (464)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~~~----- 264 (464)
. ... .+..+++..++.+|.++++|+..++.+.+.++...++.++|||+|.+.+.+....
T Consensus 141 ~-----~~~-----------~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~ 204 (394)
T 2jjm_A 141 G-----SDP-----------SLNNLIRFGIEQSDVVTAVSHSLINETHELVKPNKDIQTVYNFIDERVYFKRDMTQLKKE 204 (394)
T ss_dssp T-----TCT-----------TTHHHHHHHHHHSSEEEESCHHHHHHHHHHTCCSSCEEECCCCCCTTTCCCCCCHHHHHH
T ss_pred C-----CCH-----------HHHHHHHHHHhhCCEEEECCHHHHHHHHHhhCCcccEEEecCCccHHhcCCcchHHHHHH
Confidence 0 000 1122456667899999999999999999987766799999999998877643211
Q ss_pred --CCCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEcc
Q 012436 265 --RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYK 342 (464)
Q Consensus 265 --~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g 342 (464)
.+++.++++|+|++.+.||++.+++|++.+.++ ++++|+++|+++.. +++++.++++++.++|.|.|
T Consensus 205 ~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~-----~~~~l~i~G~g~~~------~~l~~~~~~~~l~~~v~~~g 273 (394)
T 2jjm_A 205 YGISESEKILIHISNFRKVKRVQDVVQAFAKIVTE-----VDAKLLLVGDGPEF------CTILQLVKNLHIEDRVLFLG 273 (394)
T ss_dssp TTCC---CEEEEECCCCGGGTHHHHHHHHHHHHHS-----SCCEEEEECCCTTH------HHHHHHHHTTTCGGGBCCCB
T ss_pred cCCCCCCeEEEEeeccccccCHHHHHHHHHHHHhh-----CCCEEEEECCchHH------HHHHHHHHHcCCCCeEEEeC
Confidence 114568999999999999999999999999776 27899999988643 78899999999989999999
Q ss_pred CCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC--CHHHHHHHHHHH
Q 012436 343 NLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ--NAEEYADAIVKI 420 (464)
Q Consensus 343 ~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~--~~~~la~~i~~l 420 (464)
+. +++.++|+.||++++||..|++|++++|||++|+|||+++.++. .|++.+ +.+|++++ |+++++++|.++
T Consensus 274 ~~--~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~PvI~~~~~~~-~e~v~~---~~~g~~~~~~d~~~la~~i~~l 347 (394)
T 2jjm_A 274 KQ--DNVAELLAMSDLMLLLSEKESFGLVLLEAMACGVPCIGTRVGGI-PEVIQH---GDTGYLCEVGDTTGVADQAIQL 347 (394)
T ss_dssp SC--SCTHHHHHTCSEEEECCSCCSCCHHHHHHHHTTCCEEEECCTTS-TTTCCB---TTTEEEECTTCHHHHHHHHHHH
T ss_pred ch--hhHHHHHHhCCEEEeccccCCCchHHHHHHhcCCCEEEecCCCh-HHHhhc---CCceEEeCCCCHHHHHHHHHHH
Confidence 75 89999999999999999999999999999999999999999988 788888 88999987 999999999999
Q ss_pred HcCCHHHHHHHHHHHHHHH-HccCHHHHHHHHHHHHHHHHhhc
Q 012436 421 ISMPETERLEMAAAARRRA-ARFSEQRFYEDFKAAIRPILCHA 462 (464)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~ 462 (464)
++ |++.++++++++++.+ ++|+|+.+++++.++|++++.+.
T Consensus 348 ~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 389 (394)
T 2jjm_A 348 LK-DEELHRNMGERARESVYEQFRSEKIVSQYETIYYDVLRDD 389 (394)
T ss_dssp HH-CHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTC---
T ss_pred Hc-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhh
Confidence 99 9999999999999999 99999999999999999987653
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-41 Score=329.36 Aligned_cols=362 Identities=16% Similarity=0.154 Sum_probs=267.3
Q ss_pred cccccceEEEecCCCCCC-CCcchhhHHHHHHhhhhCCCCceEEEcccCCCC-chhHHHHHHhhcCcccCCCceeeeeec
Q 012436 30 RRNRTTSVAFFHPNTNDG-GGGERVLWCAVKAIQEESPDLDCIVYTGDHDAF-PDSLLARAVDRFGVELLHPPKVVHLYR 107 (464)
Q Consensus 30 ~~~~~mkI~~~~~~~~~~-GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (464)
+..++|||+++.++.+.. ||+++++.+++++|.+.|| +|.+++...... .... . . ... +++.++.
T Consensus 16 ~~~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~--~V~v~~~~~~~~~~~~~----~---~---~~~-~~~~~~~ 82 (406)
T 2gek_A 16 PRGSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGH--EVSVLAPASPHVKLPDY----V---V---SGG-KAVPIPY 82 (406)
T ss_dssp -----CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTC--EEEEEESCCTTSCCCTT----E---E---ECC-CCC----
T ss_pred cCCCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCC--eEEEEecCCccccCCcc----c---c---cCC-cEEeccc
Confidence 445779999999877554 8999999999999999995 555555443111 0000 0 0 000 1111111
Q ss_pred ccccccccCcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccch--hhhccCceEEEEeeCCcchhhhhhcccccc
Q 012436 108 RKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTISLDMISRVREGS 185 (464)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~--~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~ 185 (464)
... ...+ .........+.+.+++.+||+||.+......+. +++..++|+|+++|....
T Consensus 83 ~~~-----~~~~---~~~~~~~~~l~~~l~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~------------ 142 (406)
T 2gek_A 83 NGS-----VARL---RFGPATHRKVKKWIAEGDFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTSTT------------ 142 (406)
T ss_dssp ----------------CCHHHHHHHHHHHHHHCCSEEEEECCCSSSHHHHHHHHEESSEEEEECCCCC------------
T ss_pred cCC-----cccc---cccHHHHHHHHHHHHhcCCCEEEECCccchHHHHHHHHhcCCCEEEEEcCcch------------
Confidence 100 0000 001112345566788889999997666554432 444668999999994321
Q ss_pred cccCCCcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCCC--
Q 012436 186 SMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL-- 263 (464)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~~-- 263 (464)
.... .......+ +..++.+|.++++|+..++.+.+.++ ..++ ++|||+|.+.+.....
T Consensus 143 --------------~~~~---~~~~~~~~-~~~~~~~d~ii~~s~~~~~~~~~~~~-~~~~-vi~~~v~~~~~~~~~~~~ 202 (406)
T 2gek_A 143 --------------KSLT---LSVFQGIL-RPYHEKIIGRIAVSDLARRWQMEALG-SDAV-EIPNGVDVASFADAPLLD 202 (406)
T ss_dssp --------------SHHH---HHHHHSTT-HHHHTTCSEEEESSHHHHHHHHHHHS-SCEE-ECCCCBCHHHHHTCCCCT
T ss_pred --------------hhhh---HHHHHHHH-HHHHhhCCEEEECCHHHHHHHHHhcC-CCcE-EecCCCChhhcCCCchhh
Confidence 0000 11111122 26679999999999999999988776 4578 9999998776543321
Q ss_pred CCCCCCcEEEEEecc-CCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEcc
Q 012436 264 ERSTEYPAIISVAQF-RPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYK 342 (464)
Q Consensus 264 ~~~~~~~~i~~~G~~-~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g 342 (464)
....+.++++|+|++ .+.||++.+++++..+.++. |+++|+++|+++. +++++.++++ .++|.++|
T Consensus 203 ~~~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~----~~~~l~i~G~~~~-------~~l~~~~~~~--~~~v~~~g 269 (406)
T 2gek_A 203 GYPREGRTVLFLGRYDEPRKGMAVLLAALPKLVARF----PDVEILIVGRGDE-------DELREQAGDL--AGHLRFLG 269 (406)
T ss_dssp TCSCSSCEEEEESCTTSGGGCHHHHHHHHHHHHTTS----TTCEEEEESCSCH-------HHHHHHTGGG--GGGEEECC
T ss_pred hccCCCeEEEEEeeeCccccCHHHHHHHHHHHHHHC----CCeEEEEEcCCcH-------HHHHHHHHhc--cCcEEEEe
Confidence 112245799999999 99999999999999998776 6999999999852 5677777766 57999999
Q ss_pred CCChhHHHHHHhcCcEEEEcCC-CCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC--CHHHHHHHHHH
Q 012436 343 NLLYRDLVKLLGGAVVGIHSMI-DEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ--NAEEYADAIVK 419 (464)
Q Consensus 343 ~~~~~~~~~~l~~ad~~v~ps~-~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~--~~~~la~~i~~ 419 (464)
+++++++.++|+.||++|+||. .|++|++++|||++|+|||+++.++. .+++.+ +.+|++++ |+++++++|.+
T Consensus 270 ~~~~~~~~~~~~~adv~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~~~~-~e~i~~---~~~g~~~~~~d~~~l~~~i~~ 345 (406)
T 2gek_A 270 QVDDATKASAMRSADVYCAPHLGGESFGIVLVEAMAAGTAVVASDLDAF-RRVLAD---GDAGRLVPVDDADGMAAALIG 345 (406)
T ss_dssp SCCHHHHHHHHHHSSEEEECCCSCCSSCHHHHHHHHHTCEEEECCCHHH-HHHHTT---TTSSEECCTTCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHCCEEEecCCCCCCCchHHHHHHHcCCCEEEecCCcH-HHHhcC---CCceEEeCCCCHHHHHHHHHH
Confidence 9999999999999999999995 99999999999999999999999888 788888 88999985 99999999999
Q ss_pred HHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhhc
Q 012436 420 IISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIRPILCHA 462 (464)
Q Consensus 420 l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 462 (464)
+++ |++.++++++++++.+++|+|+.+++++.++|++++..+
T Consensus 346 l~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 387 (406)
T 2gek_A 346 ILE-DDQLRAGYVARASERVHRYDWSVVSAQIMRVYETVSGAG 387 (406)
T ss_dssp HHH-CHHHHHHHHHHHHHHGGGGBHHHHHHHHHHHHHHHCCTT
T ss_pred HHc-CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhc
Confidence 999 999999999999999889999999999999999988654
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-41 Score=347.89 Aligned_cols=394 Identities=14% Similarity=0.150 Sum_probs=275.9
Q ss_pred cceEEEecCCC----------CCCCCcchhhHH--------HHHHhhhhCCCCc--eEEEcccCCCCch-hHHHHHHhhc
Q 012436 34 TTSVAFFHPNT----------NDGGGGERVLWC--------AVKAIQEESPDLD--CIVYTGDHDAFPD-SLLARAVDRF 92 (464)
Q Consensus 34 ~mkI~~~~~~~----------~~~GG~~~~~~~--------l~~~L~~~g~~~~--v~~~~~~~~~~~~-~~~~~~~~~~ 92 (464)
.++|+++++.. +..||...++.+ ++++|.+.||+|+ |.++|........ .+.....
T Consensus 278 ~~~i~~is~hg~~~~~~~lG~~dtGGq~vyV~e~~~al~~ela~~L~~~G~~V~~~V~v~Tr~~~~~~g~~y~~~~e--- 354 (816)
T 3s28_A 278 VFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDAVGTTCGERLE--- 354 (816)
T ss_dssp CCEEEEECCSSCCCSSSCTTSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECCTTCTTSSTTSSEE---
T ss_pred eeEEEEEcCCcccCccccCCCCCCCCceeeHHHHHHHHHHHHHHHHHHCCCccceeeEEEeCCCCCCCCCccCCcce---
Confidence 58999998765 344899999984 6777788998774 6677765421110 0000000
Q ss_pred CcccCCCceeeeeeccccc---c--cccCcceehhhhchhhhHHHHHHhh--hcCCcEEEecccccccch--hhhccCce
Q 012436 93 GVELLHPPKVVHLYRRKWI---E--ESTYPRFTMIGQSFGSVYLSWEALC--KFTPLYYFDTSGYAFTYP--LARIFGCR 163 (464)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~Dvv~~~~~~~~~~~--~~~~~~~p 163 (464)
.+.-.+++++++++..... . ..+...+..+..+... .+...++ ..+||+||++........ +++..++|
T Consensus 355 ~i~~~~gv~I~RvP~~~~~g~l~~~l~k~~L~~~L~~F~~~--~l~~il~~~~~~PDVIHsH~~~sglva~llar~~gvP 432 (816)
T 3s28_A 355 RVYDSEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTED--AAVELSKELNGKPDLIIGNYSDGNLVASLLAHKLGVT 432 (816)
T ss_dssp ECTTCSSEEEEEECEEETTEEECSCCCTTTCGGGHHHHHHH--HHHHHHHHCSSCCSEEEEEHHHHHHHHHHHHHHHTCC
T ss_pred eecCcCCeEEEEecCCCccccccccccHHHHHHHHHHHHHH--HHHHHHHhcCCCCeEEEeCCchHHHHHHHHHHHcCCC
Confidence 0111124466666654310 0 0011111111111111 1222232 347999998765444333 66688999
Q ss_pred EEEEeeCCcchhhhhhcccccccccCCCcccccchhhhHHHHHHHH-HHHHHHHHHhhcCCEEEEcCHHHHHHHHHH---
Q 012436 164 VICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYT-FFSWMYGLVGSCADLAMVNSSWTQSHIEKL--- 239 (464)
Q Consensus 164 ~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~--- 239 (464)
+|++.|...... . .. ...........+.. .....++.+++.||.|+++|+..++.+.+.
T Consensus 433 ~V~T~Hsl~~~k----~--------~~-----~~~~~~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S~~~~~~l~~~~~~ 495 (816)
T 3s28_A 433 QCTIAHALEKTK----Y--------PD-----SDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQ 495 (816)
T ss_dssp EEEECSCCHHHH----S--------TT-----TTTTHHHHHHHHCHHHHHHHHHHHHHHSSEEEESCHHHHHCCSSSCCT
T ss_pred EEEEEecccccc----c--------cc-----ccchhhhHHHHHHHHHHHHHHHHHHHhCCEEEECCHHHHHHHHHHHHH
Confidence 999999432100 0 00 00001111111111 111246778999999999999998853221
Q ss_pred hC-------------------CCCCeEEecCCCCCCCCccCCCCC----------------------------CCCCcEE
Q 012436 240 WG-------------------IPDRIKRVYPPCDTSGLQVLPLER----------------------------STEYPAI 272 (464)
Q Consensus 240 ~~-------------------~~~~i~~i~~~~d~~~~~~~~~~~----------------------------~~~~~~i 272 (464)
++ ...++.+||||+|.+.|.+..... .+++++|
T Consensus 496 y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~r~~lg~l~~~~~~vI 575 (816)
T 3s28_A 496 YESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKEHLCVLKDKKKPIL 575 (816)
T ss_dssp TGGGSSEEETTTEEEEESCCTTCTTEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCCBTTEESCBSCTTSCEE
T ss_pred hhhhhccccchhhhcccccccCCCCEEEECCCcCHHHcCccchhhhhhhhccccccccccchhhHHHHhcccCCCCCeEE
Confidence 11 023999999999998886433111 3457899
Q ss_pred EEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCC-----CccHHHHHHHHHHHHhcCCCCcEEEccCC---
Q 012436 273 ISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRN-----KSDEERLQSLKDKSIELKVDGNVEFYKNL--- 344 (464)
Q Consensus 273 ~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~-----~~~~~~~~~l~~~~~~~~l~~~v~~~g~~--- 344 (464)
+|+|++.+.||++.+++|+..+.+.. |+++|+|+|++++ .++.++.++++++++++++.++|.|+|++
T Consensus 576 l~vGRl~~~KGid~LIeA~~~L~~~~----~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~~~~ 651 (816)
T 3s28_A 576 FTMARLDRVKNLSGLVEWYGKNTRLR----ELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDR 651 (816)
T ss_dssp EEECCCCTTTTHHHHHHHHHHCHHHH----HHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCCCCH
T ss_pred EEEccCcccCCHHHHHHHHHHHHhhC----CCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCcccc
Confidence 99999999999999999999998765 5899999999872 22334678999999999999999999955
Q ss_pred -ChhHHHHHHh-cCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC--CHHHHHHHHHHH
Q 012436 345 -LYRDLVKLLG-GAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ--NAEEYADAIVKI 420 (464)
Q Consensus 345 -~~~~~~~~l~-~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~--~~~~la~~i~~l 420 (464)
+.+++..+|+ .+|++++||..|+||++++||||||+|||+|+.+|. .+++.+ +.+|++++ |+++++++|.++
T Consensus 652 v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~PVIasd~GG~-~EiV~d---g~~Gllv~p~D~e~LA~aI~~l 727 (816)
T 3s28_A 652 VRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGP-AEIIVH---GKSGFHIDPYHGDQAADTLADF 727 (816)
T ss_dssp HHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTCCEEEESSBTH-HHHCCB---TTTBEEECTTSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCCCEEEeCCCCh-HHHHcc---CCcEEEeCCCCHHHHHHHHHHH
Confidence 4589999998 679999999999999999999999999999999998 789988 89999987 999999999776
Q ss_pred H----cCCHHHHHHHHHHHHHHH-HccCHHHHHHHHHHHHHHH
Q 012436 421 I----SMPETERLEMAAAARRRA-ARFSEQRFYEDFKAAIRPI 458 (464)
Q Consensus 421 ~----~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~ 458 (464)
+ . |++.++++++++++.+ ++|||+.+++++.++|+..
T Consensus 728 L~~Ll~-d~~~~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~~~ 769 (816)
T 3s28_A 728 FTKCKE-DPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVY 769 (816)
T ss_dssp HHHHHH-CTHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHH
T ss_pred HHHhcc-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 6 8 9999999999999999 9999999999999999865
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-41 Score=328.24 Aligned_cols=356 Identities=13% Similarity=0.063 Sum_probs=267.4
Q ss_pred ceEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeecccccccc
Q 012436 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (464)
Q Consensus 35 mkI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (464)
|||+++++..+..||+++++..++++|.+. |+|+++.+..... ........+........ .
T Consensus 1 MkI~~v~~~~p~~gG~~~~~~~l~~~L~~~-~~V~v~~~~~~g~----------------~~~~~~~~~~~~~~~~~--~ 61 (413)
T 3oy2_A 1 MKLIIVGAHSSVPSGYGRVMRAIVPRISKA-HEVIVFGIHAFGR----------------SVHANIEEFDAQTAEHV--R 61 (413)
T ss_dssp CEEEEEEECTTCCSHHHHHHHHHHHHHTTT-SEEEEEEESCCSC----------------CSCSSSEEEEHHHHHHH--T
T ss_pred CeEEEecCCCCCCCCHHHHHHHHHHHHHhc-CCeEEEeecCCCc----------------ccccccccCCccccccc--c
Confidence 899999988887899999999999999999 8777766543210 00000010000000000 0
Q ss_pred cCcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccch-hhhccCc----eEEEEeeCCcchhhhhhcccccccccC
Q 012436 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-LARIFGC----RVICYTHYPTISLDMISRVREGSSMYN 189 (464)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~-~~~~~~~----p~v~~~h~p~~~~~~~~~~~~~~~~~~ 189 (464)
.+. ........+.+.+++.+||+||.+........ +++..++ +.+.+.|....
T Consensus 62 ~~~------~~~~~~~~l~~~l~~~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------- 119 (413)
T 3oy2_A 62 GLN------EQGFYYSGLSEFIDVHKPDIVMIYNDPIVIGNYLLAMGKCSHRTKIVLYVDLVSK---------------- 119 (413)
T ss_dssp TCC------STTCCHHHHHHHHHHHCCSEEEEEECHHHHHHHHHHGGGCCSCCEEEEEECCCSB----------------
T ss_pred ccc------cccchHHHHHHHHHhcCCCEEEEcchHHHHHHHHHHhccCCCCCceeeeccccch----------------
Confidence 000 00011234456678889999997744333222 3334444 44555552110
Q ss_pred CCcccccchhhhHHHHHHHHHHHHHHHHHhhcCC--EEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCC--CCC
Q 012436 190 NNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCAD--LAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLP--LER 265 (464)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad--~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~--~~~ 265 (464)
..... .+..++.+| .++++|+..++.+.+ ++.+.++.++|||+|.+.+.... ...
T Consensus 120 ---------~~~~~-----------~~~~~~~~~~~~ii~~S~~~~~~~~~-~~~~~~~~vi~ngvd~~~~~~~~~~~~~ 178 (413)
T 3oy2_A 120 ---------NIREN-----------LWWIFSHPKVVGVMAMSKCWISDICN-YGCKVPINIVSHFVDTKTIYDARKLVGL 178 (413)
T ss_dssp ---------SCCGG-----------GGGGGGCTTEEEEEESSTHHHHHHHH-TTCCSCEEECCCCCCCCCCTTHHHHTTC
T ss_pred ---------hhHHH-----------HHHHHhccCCceEEEcCHHHHHHHHH-cCCCCceEEeCCCCCHHHHHHHHHhcCC
Confidence 00000 145568888 999999999999998 45578999999999998763211 111
Q ss_pred CC--CCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCc------
Q 012436 266 ST--EYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGN------ 337 (464)
Q Consensus 266 ~~--~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~------ 337 (464)
++ +.++++|+|++.+.||++.+++|+..+.++. |+++|+|+|+++........+.++++++++|+.++
T Consensus 179 ~~~~~~~~il~vGr~~~~Kg~~~li~a~~~l~~~~----~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~ 254 (413)
T 3oy2_A 179 SEYNDDVLFLNMNRNTARKRLDIYVLAAARFISKY----PDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNK 254 (413)
T ss_dssp GGGTTSEEEECCSCSSGGGTHHHHHHHHHHHHHHC----TTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTT
T ss_pred CcccCceEEEEcCCCchhcCcHHHHHHHHHHHHhC----CCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccc
Confidence 12 6789999999999999999999999998876 69999999998765444455788999999999886
Q ss_pred -EEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccc-------------
Q 012436 338 -VEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQT------------- 403 (464)
Q Consensus 338 -v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~------------- 403 (464)
+.+.|+++++++.++|++||++++||..|+||++++|||++|+|||+|+.+|. .|++.+ +.+
T Consensus 255 vv~~~g~~~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~~g~-~e~v~~---~~~~~i~~~~~~~~~~ 330 (413)
T 3oy2_A 255 IMINRTVLTDERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGKPLIISAVGGA-DDYFSG---DCVYKIKPSAWISVDD 330 (413)
T ss_dssp EEEECSCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHTTTCCEEEECCHHH-HHHSCT---TTSEEECCCEEEECTT
T ss_pred eeeccCcCCHHHHHHHHHhCCEEEeCCCcCCCCcHHHHHHHcCCCEEEcCCCCh-HHHHcc---Cccccccccccccccc
Confidence 88889999999999999999999999999999999999999999999999988 788877 665
Q ss_pred --ee--ecC--CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-HccCHHHHHHHHHHHHHHHHhhc
Q 012436 404 --GF--LAQ--NAEEYADAIVKIISMPETERLEMAAAARRRA-ARFSEQRFYEDFKAAIRPILCHA 462 (464)
Q Consensus 404 --g~--~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~ 462 (464)
|+ +++ |+++++++| ++++ |++.++++++++++.+ ++|||+.+++++.++|+++++++
T Consensus 331 ~~G~~gl~~~~d~~~la~~i-~l~~-~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~~ 394 (413)
T 3oy2_A 331 RDGIGGIEGIIDVDDLVEAF-TFFK-DEKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSLLRVE 394 (413)
T ss_dssp TCSSCCEEEECCHHHHHHHH-HHTT-SHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHTC--
T ss_pred ccCcceeeCCCCHHHHHHHH-HHhc-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhc
Confidence 77 775 999999999 9999 9999999999999999 89999999999999999998754
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-41 Score=329.38 Aligned_cols=356 Identities=17% Similarity=0.191 Sum_probs=259.8
Q ss_pred cccceEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHH---HHHhhc-CcccCCCceeeeeec
Q 012436 32 NRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLA---RAVDRF-GVELLHPPKVVHLYR 107 (464)
Q Consensus 32 ~~~mkI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~ 107 (464)
.++|||+++.+.. .+||+++++.+++++|.+.||++++++.... ....+ .....+ +. ..+.+..
T Consensus 38 ~~~mkIl~v~~~~-~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~-----~~~~~~~~~~~~~~~~~------~~~~~~~ 105 (416)
T 2x6q_A 38 LKGRSFVHVNSTS-FGGGVAEILHSLVPLLRSIGIEARWFVIEGP-----TEFFNVTKTFHNALQGN------ESLKLTE 105 (416)
T ss_dssp TTTCEEEEEESCS-SSSTHHHHHHHHHHHHHHTTCEEEEEECCCC-----HHHHHHHHHHHHHHTTC------CSCCCCH
T ss_pred hhccEEEEEeCCC-CCCCHHHHHHHHHHHHHhCCCeEEEEEccCC-----cchhhhhcccceeeccc------ccccccH
Confidence 3569999999875 4469999999999999999965555444322 11111 111100 11 0010000
Q ss_pred ccccccccCcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccch-hhhccCceEEEEeeCCcchhhhhhccccccc
Q 012436 108 RKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-LARIFGCRVICYTHYPTISLDMISRVREGSS 186 (464)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~-~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~ 186 (464)
. . ............+.+++.+||+||.+......+. +++ .++|+|+++|.....
T Consensus 106 ~---------~---~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~------------ 160 (416)
T 2x6q_A 106 E---------M---KELYLNVNRENSKFIDLSSFDYVLVHDPQPAALIEFYE-KKSPWLWRCHIDLSS------------ 160 (416)
T ss_dssp H---------H---HHHHHHHHHHHHHSSCGGGSSEEEEESSTTGGGGGGSC-CCSCEEEECCSCCSS------------
T ss_pred H---------H---HHHHHHHHHHHHHHHhhcCCCEEEEeccchhhHHHHHH-hcCCEEEEEccccCC------------
Confidence 0 0 0001112233455677789999998776554433 222 338999999943210
Q ss_pred ccCCCcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEE-EcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCCC--
Q 012436 187 MYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAM-VNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL-- 263 (464)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi-~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~~-- 263 (464)
... ..++ . .+..+..+|.++ ++|+..++. +. ..++.++|||+|...+...+.
T Consensus 161 ------------~~~----~~~~---~-~~~~~~~~~~~i~~~s~~~~~~----~~-~~~~~vi~ngvd~~~~~~~~~~~ 215 (416)
T 2x6q_A 161 ------------PNR----EFWE---F-LRRFVEKYDRYIFHLPEYVQPE----LD-RNKAVIMPPSIDPLSEKNVELKQ 215 (416)
T ss_dssp ------------CCH----HHHH---H-HHHHHTTSSEEEESSGGGSCTT----SC-TTTEEECCCCBCTTSTTTSCCCH
T ss_pred ------------ccH----HHHH---H-HHHHHHhCCEEEEechHHHHhh----CC-ccceEEeCCCCChhhhcccccCh
Confidence 000 0111 1 133446777766 566655442 22 378999999999876542211
Q ss_pred ----------CCCCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcC
Q 012436 264 ----------ERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELK 333 (464)
Q Consensus 264 ----------~~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~ 333 (464)
...++.++++|+|++.+.||++.+++|++.+.++. |+++|+++|+++.. +..+.+.+++++++++
T Consensus 216 ~~~~~~r~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~----~~~~l~i~G~g~~~-~~~~~~~l~~~~~~~~ 290 (416)
T 2x6q_A 216 TEILRILERFDVDPEKPIITQVSRFDPWKGIFDVIEIYRKVKEKI----PGVQLLLVGVMAHD-DPEGWIYFEKTLRKIG 290 (416)
T ss_dssp HHHHHHHHHTTCCTTSCEEEEECCCCTTSCHHHHHHHHHHHHHHC----TTCEEEEEECCCTT-CHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHhCCCCCCcEEEEEeccccccCHHHHHHHHHHHHHhC----CCeEEEEEecCccc-chhHHHHHHHHHHHhC
Confidence 11245689999999999999999999999998876 68999999998753 2344577888999999
Q ss_pred CCCcEEEccCCC---hhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecCCH
Q 012436 334 VDGNVEFYKNLL---YRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQNA 410 (464)
Q Consensus 334 l~~~v~~~g~~~---~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~~~ 410 (464)
+.++|.|+|+++ ++++.++|+.||++++||..|++|++++|||++|+|||+++.+|. .+++.+ +.+|++++|+
T Consensus 291 ~~~~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~~E~~~~~~lEAma~G~PvI~~~~~g~-~e~i~~---~~~g~l~~d~ 366 (416)
T 2x6q_A 291 EDYDVKVLTNLIGVHAREVNAFQRASDVILQMSIREGFGLTVTEAMWKGKPVIGRAVGGI-KFQIVD---GETGFLVRDA 366 (416)
T ss_dssp TCTTEEEEEGGGTCCHHHHHHHHHHCSEEEECCSSCSSCHHHHHHHHTTCCEEEESCHHH-HHHCCB---TTTEEEESSH
T ss_pred CCCcEEEecccCCCCHHHHHHHHHhCCEEEECCCcCCCccHHHHHHHcCCCEEEccCCCC-hhheec---CCCeEEECCH
Confidence 989999999664 689999999999999999999999999999999999999999887 788888 8899999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHH-HccCHHHHHHHHHHHHHHHH
Q 012436 411 EEYADAIVKIISMPETERLEMAAAARRRA-ARFSEQRFYEDFKAAIRPIL 459 (464)
Q Consensus 411 ~~la~~i~~l~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~ 459 (464)
++++++|.++++ |++.++++++++++.+ ++|+|+.+++++.++|++++
T Consensus 367 ~~la~~i~~ll~-~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~l~ 415 (416)
T 2x6q_A 367 NEAVEVVLYLLK-HPEVSKEMGAKAKERVRKNFIITKHMERYLDILNSLG 415 (416)
T ss_dssp HHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhh
Confidence 999999999999 9999999999999999 79999999999999998765
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-41 Score=326.80 Aligned_cols=353 Identities=15% Similarity=0.123 Sum_probs=261.8
Q ss_pred ceEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeecccccccc
Q 012436 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (464)
Q Consensus 35 mkI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (464)
|||+++++...+.||+++++.+++++|.+.||++. +++...... ...+++++.++...+..
T Consensus 1 MkIl~i~~~~~~~gG~~~~~~~l~~~L~~~G~~V~--v~~~~~~~~---------------~~~~~~v~~~~~~~~~~-- 61 (374)
T 2iw1_A 1 MIVAFCLYKYFPFGGLQRDFMRIASTVAARGHHVR--VYTQSWEGD---------------CPKAFELIQVPVKSHTN-- 61 (374)
T ss_dssp -CEEEECSEECTTCHHHHHHHHHHHHHHHTTCCEE--EEESEECSC---------------CCTTCEEEECCCCCSSH--
T ss_pred CeEEEEEeecCCCcchhhHHHHHHHHHHhCCCeEE--EEecCCCCC---------------CCCCcEEEEEccCcccc--
Confidence 89999988765568999999999999999995555 444332100 01122444443322110
Q ss_pred cCcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccch--hhhccCceEEEEeeCCcchhhhhhcccccccccCCCc
Q 012436 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (464)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~--~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~ 192 (464)
..........+.+.+++.+||+||.+...+.... .++..++|.+.+.|..
T Consensus 62 -------~~~~~~~~~~l~~~i~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------- 113 (374)
T 2iw1_A 62 -------HGRNAEYYAWVQNHLKEHPADRVVGFNKMPGLDVYFAADVCYAEKVAQEKGF--------------------- 113 (374)
T ss_dssp -------HHHHHHHHHHHHHHHHHSCCSEEEESSCCTTCSEEECCSCCHHHHHHHHCCH---------------------
T ss_pred -------hhhHHHHHHHHHHHHhccCCCEEEEecCCCCceeeeccccccceeeeecccc---------------------
Confidence 1111223445566788899999997765332211 1112223333222310
Q ss_pred ccccchhhhHHHHHHHHHHHHHHHHHhh--cCCEEEEcCHHHHHHHHHHhCC-CCCeEEecCCCCCCCCccCCCCC----
Q 012436 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGS--CADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLER---- 265 (464)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ad~vi~~S~~~~~~~~~~~~~-~~~i~~i~~~~d~~~~~~~~~~~---- 265 (464)
..... ...+.+.++++..++ .+|.++++|+..++.+.+.++. ..++.++|||+|.+.+.+.....
T Consensus 114 -------~~~~~-~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~ 185 (374)
T 2iw1_A 114 -------LYRLT-SRYRHYAAFERATFEQGKSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREI 185 (374)
T ss_dssp -------HHHTS-HHHHHHHHHHHHHHSTTCCCEEEESCHHHHHHHHHHHCCCGGGEEECCCCCCGGGSGGGSCTTHHHH
T ss_pred -------hhhhc-HHHHHHHHHHHHHhhccCCcEEEEcCHHHHHHHHHHhCCChhheEEecCCcCHHhcCcccchhHHHH
Confidence 00000 011233344555554 7999999999999999988776 57899999999988776433211
Q ss_pred -------CCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcE
Q 012436 266 -------STEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNV 338 (464)
Q Consensus 266 -------~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v 338 (464)
.++.++++|+|++.+.||++.+++|++.+.+... |+++|+++|+++. ++++++++++++.++|
T Consensus 186 ~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~---~~~~l~i~G~g~~-------~~~~~~~~~~~~~~~v 255 (374)
T 2iw1_A 186 YRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLR---HNTLLFVVGQDKP-------RKFEALAEKLGVRSNV 255 (374)
T ss_dssp HHHHTTCCTTCEEEEEECSCTTTTTHHHHHHHHHTSCHHHH---HTEEEEEESSSCC-------HHHHHHHHHHTCGGGE
T ss_pred HHHHhCCCCCCeEEEEeccchhhcCHHHHHHHHHHhHhccC---CceEEEEEcCCCH-------HHHHHHHHHcCCCCcE
Confidence 2456899999999999999999999999876511 4899999999763 5788888999998999
Q ss_pred EEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC---CHHHHHH
Q 012436 339 EFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ---NAEEYAD 415 (464)
Q Consensus 339 ~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~---~~~~la~ 415 (464)
+++|+. +++.++|+.||++++||..|++|++++|||++|+|||+++.++. .+++.+ +.+|++++ |++++++
T Consensus 256 ~~~g~~--~~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~-~e~i~~---~~~g~~~~~~~~~~~l~~ 329 (374)
T 2iw1_A 256 HFFSGR--NDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGY-AHYIAD---ANCGTVIAEPFSQEQLNE 329 (374)
T ss_dssp EEESCC--SCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHTCCEEEETTSTT-THHHHH---HTCEEEECSSCCHHHHHH
T ss_pred EECCCc--ccHHHHHHhcCEEEeccccCCcccHHHHHHHCCCCEEEecCCCc-hhhhcc---CCceEEeCCCCCHHHHHH
Confidence 999985 89999999999999999999999999999999999999999988 688888 88998874 9999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Q 012436 416 AIVKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIRPIL 459 (464)
Q Consensus 416 ~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 459 (464)
+|.++++ |++.++++++++++.+++++|+.+.+++.++++..+
T Consensus 330 ~i~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 372 (374)
T 2iw1_A 330 VLRKALT-QSPLRMAWAENARHYADTQDLYSLPEKAADIITGGL 372 (374)
T ss_dssp HHHHHHH-CHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHCC-
T ss_pred HHHHHHc-ChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhh
Confidence 9999999 999999999999999988899999999999988654
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-40 Score=327.45 Aligned_cols=393 Identities=13% Similarity=0.058 Sum_probs=263.7
Q ss_pred ceEEEecCCCCC---CCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHh-----hc----C--ccc----
Q 012436 35 TSVAFFHPNTND---GGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVD-----RF----G--VEL---- 96 (464)
Q Consensus 35 mkI~~~~~~~~~---~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~-----~~----~--~~~---- 96 (464)
|||+++++.+.+ .||+++++.+++++|.+.||+|+ +++... ......... .+ + ..+
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~--vi~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTR--TLIPGY----PAVKAAVTDPVKCFEFTDLLGEKADLLEVQ 74 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEE--EEEECC----HHHHHHCCSCEEEEEESCSSSCCEEEEEEE
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEE--EEeccc----ccccccccccceeEEEEEecCCeEEEEEEE
Confidence 899999886644 48999999999999999995555 444332 111110000 00 0 000
Q ss_pred CCCceeeeeecccccccc--cCcc-----e-ehhhh---chhhhHHHHHHh-hhcCCcEEEecccccccch--hhhc--c
Q 012436 97 LHPPKVVHLYRRKWIEES--TYPR-----F-TMIGQ---SFGSVYLSWEAL-CKFTPLYYFDTSGYAFTYP--LARI--F 160 (464)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~--~~~~-----~-~~~~~---~~~~~~~~~~~l-~~~~~Dvv~~~~~~~~~~~--~~~~--~ 160 (464)
..+++++.++...+.... .+.. + ..... +........+.+ ++.+||+||.+.......+ +++. .
T Consensus 75 ~~gv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiIh~~~~~~~~~~~~~~~~~~~ 154 (485)
T 1rzu_A 75 HERLDLLILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQAAMTPVYMRYAETP 154 (485)
T ss_dssp ETTEEEEEEECHHHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHHHTTHHHHHHHSSSC
T ss_pred ecCceEEEEeChHHhCCCccccCCcccccccchHHHHHHHHHHHHHHHHHhccCCCCCEEEecccchhHHHHHHhhcccC
Confidence 123345544432111100 1110 0 00000 011122222223 5779999998765443333 3333 7
Q ss_pred CceEEEEeeCCcchhhhhhcccccccccCCCcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHH-
Q 012436 161 GCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKL- 239 (464)
Q Consensus 161 ~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~- 239 (464)
++|+|+++|............ +... ......+.......+ ....+++..++.+|.++++|+..++.+.+.
T Consensus 155 ~~p~v~t~H~~~~~~~~~~~~------~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~ 225 (485)
T 1rzu_A 155 EIPSLLTIHNIAFQGQFGANI------FSKL-ALPAHAFGMEGIEYY--NDVSFLKGGLQTATALSTVSPSYAEEILTAE 225 (485)
T ss_dssp CCCEEEEESCTTCCCEECGGG------GGGS-CCCGGGSSTTTTEET--TEEEHHHHHHHHCSEEEESCHHHHHHTTSHH
T ss_pred CCCEEEEecCccccCCCCHHH------Hhhc-CCChhhccccccccc--ccccHHHHHHhhcCEEEecCHhHHHHHhccc
Confidence 999999999532100000000 0000 000000000000000 001234666789999999999999998764
Q ss_pred hC---------CCCCeEEecCCCCCCCCccCCCC--------------------------CCC-CCcEEEEEeccCCCCC
Q 012436 240 WG---------IPDRIKRVYPPCDTSGLQVLPLE--------------------------RST-EYPAIISVAQFRPEKA 283 (464)
Q Consensus 240 ~~---------~~~~i~~i~~~~d~~~~~~~~~~--------------------------~~~-~~~~i~~~G~~~~~K~ 283 (464)
++ ...++.+||||+|.+.+.+.... .++ +.++++|+|++.+.||
T Consensus 226 ~g~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~vGrl~~~Kg 305 (485)
T 1rzu_A 226 FGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKG 305 (485)
T ss_dssp HHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESCBSTTTT
T ss_pred cCcchHHHHHhhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHHHHhcCCCCCCCeEEEEEccCccccC
Confidence 33 25789999999998877643211 011 2569999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEE-EccCCChhHHHHHHhcCcEEEEc
Q 012436 284 HPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVE-FYKNLLYRDLVKLLGGAVVGIHS 362 (464)
Q Consensus 284 ~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~-~~g~~~~~~~~~~l~~ad~~v~p 362 (464)
++.+++|+..+.+. +++|+|+|+|+. .+.+.+++++++++ ++|. +.|+ +.+++.++|+.||++|+|
T Consensus 306 ~~~li~a~~~l~~~------~~~l~ivG~g~~----~~~~~l~~~~~~~~--~~v~~~~g~-~~~~~~~~~~~adv~v~p 372 (485)
T 1rzu_A 306 IDLMAEAVDEIVSL------GGRLVVLGAGDV----ALEGALLAAASRHH--GRVGVAIGY-NEPLSHLMQAGCDAIIIP 372 (485)
T ss_dssp HHHHHTTHHHHHHT------TCEEEEEECBCH----HHHHHHHHHHHHTT--TTEEEEESC-CHHHHHHHHHHCSEEEEC
T ss_pred HHHHHHHHHHHHhc------CceEEEEeCCch----HHHHHHHHHHHhCC--CcEEEecCC-CHHHHHHHHhcCCEEEEC
Confidence 99999999998763 899999999852 35578888888875 6887 7888 788889999999999999
Q ss_pred CCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCc---------cceeecC--CHHHHHHHHHHHH---cCCHHHH
Q 012436 363 MIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQ---------QTGFLAQ--NAEEYADAIVKII---SMPETER 428 (464)
Q Consensus 363 s~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~---------~~g~~~~--~~~~la~~i~~l~---~~~~~~~ 428 (464)
|..|+||++++|||+||+|||+|+.+|. .|++.+ + .+|++++ |+++++++|.+++ + |++.+
T Consensus 373 S~~E~~~~~~lEAma~G~PvI~s~~gg~-~e~v~~---~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~-~~~~~ 447 (485)
T 1rzu_A 373 SRFEPCGLTQLYALRYGCIPVVARTGGL-ADTVID---ANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYH-DPKLW 447 (485)
T ss_dssp CSCCSSCSHHHHHHHHTCEEEEESSHHH-HHHCCB---CCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHT-CHHHH
T ss_pred cccCCCCHHHHHHHHCCCCEEEeCCCCh-hheecc---cccccccccCCcceEeCCCCHHHHHHHHHHHHHHhC-CHHHH
Confidence 9999999999999999999999999988 788888 7 8999986 9999999999999 8 99999
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhhc
Q 012436 429 LEMAAAARRRAARFSEQRFYEDFKAAIRPILCHA 462 (464)
Q Consensus 429 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 462 (464)
+++++++++ ++|||+.+++++.++|++++.++
T Consensus 448 ~~~~~~~~~--~~fs~~~~~~~~~~~y~~~~~~~ 479 (485)
T 1rzu_A 448 TQMQKLGMK--SDVSWEKSAGLYAALYSQLISKG 479 (485)
T ss_dssp HHHHHHHHT--CCCBHHHHHHHHHHHHHHHTC--
T ss_pred HHHHHHHHH--HhCChHHHHHHHHHHHHHhhCCC
Confidence 999998875 88999999999999999988754
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-39 Score=320.78 Aligned_cols=393 Identities=16% Similarity=0.083 Sum_probs=264.0
Q ss_pred ceEEEecCCCCC---CCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHh--------hcC--ccc----C
Q 012436 35 TSVAFFHPNTND---GGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVD--------RFG--VEL----L 97 (464)
Q Consensus 35 mkI~~~~~~~~~---~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~--------~~~--~~~----~ 97 (464)
|||+++++.+.+ .||+++++.+++++|.+.||+|+ +++... ......... .++ ..+ .
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~--vi~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDAR--VLLPAF----PDIRRGVTDAQVVSRRDTFAGHITLLFGHY 74 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEE--EEEECC----HHHHHHCTTCEEEEEECCTTCCEEEEEEEE
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEE--EEecCc----cccccccccceeEEEecccCCcEEEEEEEE
Confidence 899999886543 48999999999999999995554 444332 111110000 000 000 1
Q ss_pred CCceeeeeecccccccc--cCcc-----e-ehhhhchhhhHHHHHHhh----hcCCcEEEecccccccch--hh-hccCc
Q 012436 98 HPPKVVHLYRRKWIEES--TYPR-----F-TMIGQSFGSVYLSWEALC----KFTPLYYFDTSGYAFTYP--LA-RIFGC 162 (464)
Q Consensus 98 ~~~~~~~~~~~~~~~~~--~~~~-----~-~~~~~~~~~~~~~~~~l~----~~~~Dvv~~~~~~~~~~~--~~-~~~~~ 162 (464)
.+++++.++...+.... .+.. + ............+.+.++ +.+||+||.+.......+ ++ +..++
T Consensus 75 ~gv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Divh~~~~~~~~~~~~~~~~~~~~ 154 (485)
T 2qzs_A 75 NGVGIYLIDAPHLYDRPGSPYHDTNLFAYTDNVLRFALLGWVGAEMASGLDPFWRPDVVHAHDWHAGLAPAYLAARGRPA 154 (485)
T ss_dssp TTEEEEEEECHHHHCCSSCSSBCTTSCBCTTHHHHHHHHHHHHHHHTTTSSTTCCCSEEEEETGGGTTHHHHHHHTTCSS
T ss_pred CCcEEEEEeChhhccCCCCccCCcccCCCCchHHHHHHHHHHHHHHHHHhccCCCCCEEEeeccchhHHHHHHhhccCCC
Confidence 23355554432111110 0110 0 000000111223334444 378999998775544433 33 56799
Q ss_pred eEEEEeeCCcchhhhhhcccccccccCCCcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHH-hC
Q 012436 163 RVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKL-WG 241 (464)
Q Consensus 163 p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~-~~ 241 (464)
|+|+++|............ +... ......+....... ....++++..++.+|.++++|+..++.+.+. ++
T Consensus 155 p~v~t~H~~~~~~~~~~~~------~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~ 225 (485)
T 2qzs_A 155 KSVFTVHNLAYQGMFYAHH------MNDI-QLPWSFFNIHGLEF--NGQISFLKAGLYYADHITAVSPTYAREITEPQFA 225 (485)
T ss_dssp EEEEEESCTTCCCEEEGGG------GGTT-TCCGGGCSTTTTEE--TTEEEHHHHHHHHCSEEEESSHHHHHHTTSHHHH
T ss_pred CEEEEecCccccCCCCHHH------HHhc-CCCchhcccccccc--cccccHHHHHHHhcCeEEecCHHHHHHHhccccC
Confidence 9999999532100000000 0000 00000000000000 0001234666789999999999999998764 33
Q ss_pred C---------C--CCeEEecCCCCCCCCccCCCC--------------------------CC--CCCcEEEEEeccCCCC
Q 012436 242 I---------P--DRIKRVYPPCDTSGLQVLPLE--------------------------RS--TEYPAIISVAQFRPEK 282 (464)
Q Consensus 242 ~---------~--~~i~~i~~~~d~~~~~~~~~~--------------------------~~--~~~~~i~~~G~~~~~K 282 (464)
. . .++.+||||+|.+.+.+.... .+ ++.++++|+|++.+.|
T Consensus 226 ~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~vGrl~~~K 305 (485)
T 2qzs_A 226 YGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQK 305 (485)
T ss_dssp TTCHHHHHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHHHHHTCCCCTTSCEEEEEEEESGGG
T ss_pred cchHHHHHhhccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHHHHHHcCCCCCCCCeEEEEeccCcccc
Confidence 2 1 789999999998877643211 01 2568999999999999
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEE-EccCCChhHHHHHHhcCcEEEE
Q 012436 283 AHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVE-FYKNLLYRDLVKLLGGAVVGIH 361 (464)
Q Consensus 283 ~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~-~~g~~~~~~~~~~l~~ad~~v~ 361 (464)
|++.+++|++.+.+. +++|+|+|+|+. .+.+.+++++++++ ++|. +.|+ +.+++.++|+.||++|+
T Consensus 306 g~~~li~a~~~l~~~------~~~l~ivG~g~~----~~~~~l~~~~~~~~--~~v~~~~g~-~~~~~~~~~~~adv~v~ 372 (485)
T 2qzs_A 306 GLDLVLEALPGLLEQ------GGQLALLGAGDP----VLQEGFLAAAAEYP--GQVGVQIGY-HEAFSHRIMGGADVILV 372 (485)
T ss_dssp CHHHHHHHHHHHHHT------TCEEEEEEEECH----HHHHHHHHHHHHST--TTEEEEESC-CHHHHHHHHHHCSEEEE
T ss_pred CHHHHHHHHHHHhhC------CcEEEEEeCCch----HHHHHHHHHHHhCC--CcEEEeCCC-CHHHHHHHHHhCCEEEE
Confidence 999999999998762 899999998752 35578888888875 6786 7888 78888999999999999
Q ss_pred cCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCc---------cceeecC--CHHHHHHHHHHHH---cCCHHH
Q 012436 362 SMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQ---------QTGFLAQ--NAEEYADAIVKII---SMPETE 427 (464)
Q Consensus 362 ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~---------~~g~~~~--~~~~la~~i~~l~---~~~~~~ 427 (464)
||..|+||++++|||+||+|||+|+.+|. .|++.+ + .+|++++ |+++++++|.+++ + |++.
T Consensus 373 pS~~E~~g~~~lEAma~G~PvI~s~~gg~-~e~v~~---~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~-~~~~ 447 (485)
T 2qzs_A 373 PSRFEPCGLTQLYGLKYGTLPLVRRTGGL-ADTVSD---CSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLWS-RPSL 447 (485)
T ss_dssp CCSCCSSCSHHHHHHHHTCEEEEESSHHH-HHHCCB---CCHHHHHTTCCCBEEECSSSHHHHHHHHHHHHHHHT-SHHH
T ss_pred CCccCCCcHHHHHHHHCCCCEEECCCCCc-cceecc---CccccccccccceEEECCCCHHHHHHHHHHHHHHcC-CHHH
Confidence 99999999999999999999999999988 788888 7 7999986 9999999999999 8 9999
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhhc
Q 012436 428 RLEMAAAARRRAARFSEQRFYEDFKAAIRPILCHA 462 (464)
Q Consensus 428 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 462 (464)
++++++++++ ++|||+.+++++.++|++++...
T Consensus 448 ~~~~~~~~~~--~~fs~~~~~~~~~~ly~~~~~~~ 480 (485)
T 2qzs_A 448 WRFVQRQAMA--MDFSWQVAAKSYRELYYRLKLEH 480 (485)
T ss_dssp HHHHHHHHHH--CCCCHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHh--hcCCHHHHHHHHHHHHHHhhhhh
Confidence 9999998875 89999999999999999987543
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-38 Score=301.22 Aligned_cols=313 Identities=16% Similarity=0.088 Sum_probs=244.4
Q ss_pred ccceEEEecCC-----------CCC--CCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCC
Q 012436 33 RTTSVAFFHPN-----------TND--GGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHP 99 (464)
Q Consensus 33 ~~mkI~~~~~~-----------~~~--~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (464)
++|||+++.+. +++ .||+++++.+++++|.+.| ++|.+++........ .++
T Consensus 2 ~~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G--~~v~v~~~~~~~~~~---------~~~----- 65 (342)
T 2iuy_A 2 RPLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELG--HEVFLLGAPGSPAGR---------PGL----- 65 (342)
T ss_dssp -CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTT--CEEEEESCTTSCCCS---------TTE-----
T ss_pred CccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcC--CeEEEEecCCCCCCC---------Ccc-----
Confidence 35999999887 222 3899999999999999999 566666654311110 011
Q ss_pred ceeeeeecccccccccCcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccchhhhccCceEEEEeeCCcchhhhhh
Q 012436 100 PKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMIS 179 (464)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~p~v~~~h~p~~~~~~~~ 179 (464)
.++.. . ....+.+.+++.+||+||.+....... .++..++| |+++|....
T Consensus 66 -~~~~~--~-------------------~~~~l~~~l~~~~~Dvi~~~~~~~~~~-~~~~~~~p-v~~~h~~~~------ 115 (342)
T 2iuy_A 66 -TVVPA--G-------------------EPEEIERWLRTADVDVVHDHSGGVIGP-AGLPPGTA-FISSHHFTT------ 115 (342)
T ss_dssp -EECSC--C-------------------SHHHHHHHHHHCCCSEEEECSSSSSCS-TTCCTTCE-EEEEECSSS------
T ss_pred -eeccC--C-------------------cHHHHHHHHHhcCCCEEEECCchhhHH-HHhhcCCC-EEEecCCCC------
Confidence 11110 0 012455668888999999877654432 45678999 999994321
Q ss_pred cccccccccCCCcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCc
Q 012436 180 RVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQ 259 (464)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~ 259 (464)
. . ..+|.++++|+..++.+.+ ..++.++|||+|.+.+.
T Consensus 116 ~----------------~----------------------~~~d~ii~~S~~~~~~~~~----~~~~~vi~ngvd~~~~~ 153 (342)
T 2iuy_A 116 R----------------P----------------------VNPVGCTYSSRAQRAHCGG----GDDAPVIPIPVDPARYR 153 (342)
T ss_dssp B----------------C----------------------SCCTTEEESCHHHHHHTTC----CTTSCBCCCCBCGGGSC
T ss_pred C----------------c----------------------ccceEEEEcCHHHHHHHhc----CCceEEEcCCCChhhcC
Confidence 0 0 1289999999999998866 57888999999988776
Q ss_pred cCCCCCCCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEE
Q 012436 260 VLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVE 339 (464)
Q Consensus 260 ~~~~~~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~ 339 (464)
+.... ..+.++++|+|++.+.||++.+++|++.+ +++|+++|+|+.. +.+++++++++ ++|+
T Consensus 154 ~~~~~-~~~~~~i~~vG~~~~~Kg~~~li~a~~~~---------~~~l~i~G~g~~~------~~l~~~~~~~~--~~v~ 215 (342)
T 2iuy_A 154 SAADQ-VAKEDFLLFMGRVSPHKGALEAAAFAHAC---------GRRLVLAGPAWEP------EYFDEITRRYG--STVE 215 (342)
T ss_dssp CSTTC-CCCCSCEEEESCCCGGGTHHHHHHHHHHH---------TCCEEEESCCCCH------HHHHHHHHHHT--TTEE
T ss_pred ccccc-CCCCCEEEEEeccccccCHHHHHHHHHhc---------CcEEEEEeCcccH------HHHHHHHHHhC--CCEE
Confidence 43332 23457899999999999999999999987 7899999998643 66777777776 7999
Q ss_pred EccCCChhHHHHHHhcCcEEEEcCC----------CCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC-
Q 012436 340 FYKNLLYRDLVKLLGGAVVGIHSMI----------DEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ- 408 (464)
Q Consensus 340 ~~g~~~~~~~~~~l~~ad~~v~ps~----------~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~- 408 (464)
|+|+++++++.++|++||++++||. .|++|++++|||++|+|||+++.++. .|++.+. ++.+|++++
T Consensus 216 ~~g~~~~~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~~-~e~~~~~-~~~~g~~~~~ 293 (342)
T 2iuy_A 216 PIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCL-AEIVPSV-GEVVGYGTDF 293 (342)
T ss_dssp ECCCCCHHHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTTH-HHHGGGG-EEECCSSSCC
T ss_pred EeccCCHHHHHHHHHhCCEEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCCh-HHHhccc-CCCceEEcCC
Confidence 9999999999999999999999999 89999999999999999999999988 6776420 025889988
Q ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-HccCHHHHHHHHHHHHHHHHhhc
Q 012436 409 NAEEYADAIVKIISMPETERLEMAAAARRRA-ARFSEQRFYEDFKAAIRPILCHA 462 (464)
Q Consensus 409 ~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~ 462 (464)
|+++++++|.++++ ++++++.+ ++|+|+.+++++.++|+++++++
T Consensus 294 d~~~l~~~i~~l~~---------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 339 (342)
T 2iuy_A 294 APDEARRTLAGLPA---------SDEVRRAAVRLWGHVTIAERYVEQYRRLLAGA 339 (342)
T ss_dssp CHHHHHHHHHTSCC---------HHHHHHHHHHHHBHHHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHH---------HHHHHHHHHHhcCHHHHHHHHHHHHHHHHccC
Confidence 99999999998863 56778888 89999999999999999998764
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-38 Score=312.68 Aligned_cols=228 Identities=15% Similarity=0.116 Sum_probs=186.7
Q ss_pred HHHHHhhcCCEEEEcCHHHHHHHHHHhCC---------CCCeEEecCCCCCCCCccCCC---------------------
Q 012436 214 MYGLVGSCADLAMVNSSWTQSHIEKLWGI---------PDRIKRVYPPCDTSGLQVLPL--------------------- 263 (464)
Q Consensus 214 ~~~~~~~~ad~vi~~S~~~~~~~~~~~~~---------~~~i~~i~~~~d~~~~~~~~~--------------------- 263 (464)
+.+..+..||.|+++|+..++.+.+.++. ..++.+|+||+|.+.+.+...
T Consensus 234 ~~k~~i~~ad~v~tVS~~~a~ei~~~~~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~k~ 313 (536)
T 3vue_A 234 WMKAGILEADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKE 313 (536)
T ss_dssp HHHHHHHHCSEEEESCHHHHHHHHTTCCCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHHHH
T ss_pred HHHHHHHhccEEEEcCHHHhhhhhcccccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhhHHHHH
Confidence 34667789999999999999998765431 468999999999988864211
Q ss_pred --------CCCCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCC
Q 012436 264 --------ERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVD 335 (464)
Q Consensus 264 --------~~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~ 335 (464)
..+++.++|+|+||+.+.||++.+++|+.++.++ +.+++++|.|.. .....++.....+ .
T Consensus 314 ~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~------~~~l~l~G~G~~----~~~~~~~~~~~~~--~ 381 (536)
T 3vue_A 314 ALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQE------DVQIVLLGTGKK----KFEKLLKSMEEKY--P 381 (536)
T ss_dssp HHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTS------SCEEEEECCBCH----HHHHHHHHHHHHS--T
T ss_pred HHHHhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHhh------CCeEEEEeccCc----hHHHHHHHHHhhc--C
Confidence 1124568999999999999999999999998653 789999998853 3335555555554 5
Q ss_pred CcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCcccee----------
Q 012436 336 GNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGF---------- 405 (464)
Q Consensus 336 ~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~---------- 405 (464)
.++.+.+..+.+++..+|+.||++++||.+|+||++++|||+||+|||+|+.||. .|++.+ +.+|+
T Consensus 382 ~~v~~~~~~~~~~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~G~PvI~s~~gG~-~e~V~d---g~~G~~~~~~~~~g~ 457 (536)
T 3vue_A 382 GKVRAVVKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGL-VDTVIE---GKTGFHMGRLSVDCK 457 (536)
T ss_dssp TTEEEECSCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHTTCCEEECSCTHH-HHHCCB---TTTEEECCCCCSCTT
T ss_pred CceEEEEeccHHHHHHHHHhhheeecccccCCCCHHHHHHHHcCCCEEEcCCCCc-hheeeC---CCCccccccCCCcee
Confidence 6899999999999999999999999999999999999999999999999999999 789988 88887
Q ss_pred ecC--CHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Q 012436 406 LAQ--NAEEYADAIVKIIS-MPETERLEMAAAARRRAARFSEQRFYEDFKAAIRPIL 459 (464)
Q Consensus 406 ~~~--~~~~la~~i~~l~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 459 (464)
+++ |+++++++|.++++ .+.+.++++.+++.+ ++|||++.+++|.++|+++.
T Consensus 458 l~~~~d~~~la~ai~ral~~~~~~~~~~~~~~am~--~~fSW~~~A~~y~~ly~~L~ 512 (536)
T 3vue_A 458 VVEPSDVKKVAATLKRAIKVVGTPAYEEMVRNCMN--QDLSWKGPAKNWENVLLGLG 512 (536)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHH--SCCSSHHHHHHHHHHHHTTC
T ss_pred EECCCCHHHHHHHHHHHHHhcCcHHHHHHHHHHHH--hcCCHHHHHHHHHHHHHHhh
Confidence 454 89999999988764 133456666665532 78999999999999999864
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-35 Score=286.38 Aligned_cols=351 Identities=15% Similarity=0.084 Sum_probs=228.3
Q ss_pred cccccccceEEEecCCCCCC--CCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeee
Q 012436 28 NARRNRTTSVAFFHPNTNDG--GGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHL 105 (464)
Q Consensus 28 ~~~~~~~mkI~~~~~~~~~~--GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (464)
+..+.++|||+++++.+.++ .|+.+.+.+++++|.+.| ++|.+++..... .. ... ... . ...+..+
T Consensus 40 ~~~~~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~G--heV~Vvt~~~~~--~~--~~~-~~~----~-~~~~~~~ 107 (413)
T 2x0d_A 40 RTSSIKGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKK--FKKRIILTDATP--NP--KDL-QSF----K-SFKYVMP 107 (413)
T ss_dssp EECCCCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTT--CEEEEEESSCCC--CH--HHH-GGG----T-TSEECCT
T ss_pred ccCCCCCceEEEEeCCCCccccccHHHHHHHHHHHHHHcC--CceEEEEecCCC--Ch--HHH-Hhh----h-ccceeec
Confidence 45556889999999988875 255567889999999999 455555554321 11 111 111 0 0011000
Q ss_pred ecccccccccCcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccchhhhc----------cCceEEEEeeCCcchh
Q 012436 106 YRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARI----------FGCRVICYTHYPTISL 175 (464)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~~~~~----------~~~p~v~~~h~p~~~~ 175 (464)
..... ..++. ..+.. .....+...++|+||.+....... ..+. .+.|.+..+|...
T Consensus 108 ~~~~~----~~~~i---~~~~~---~~~~~~~~~~~Dvv~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~--- 173 (413)
T 2x0d_A 108 EEDKD----FALQI---VPFND---RYNRTIPVAKHDIFIATAWWTAYA-AQRIVSWQSDTYGIPPNKILYIIQDFE--- 173 (413)
T ss_dssp TCCCC----CSEEE---EECSC---CTTCCEEECTTEEEEECSHHHHHH-HHHHHHHHHHHHTCCCCCEEEEECSCG---
T ss_pred cCCcc----cccee---eeccc---cccccccCCCCCEEEEehHHHHHH-HHHhhhhhhhhcccccCcEEEEEeech---
Confidence 00000 00000 00000 000112234799999775433221 1111 2457777666211
Q ss_pred hhhhcccccccccCCCcccccchhhhHHHHHHHHHHHHHHHHHhhcCC--EEEEcCHHHHHHHHHHhCC-CCCeEEecCC
Q 012436 176 DMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCAD--LAMVNSSWTQSHIEKLWGI-PDRIKRVYPP 252 (464)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad--~vi~~S~~~~~~~~~~~~~-~~~i~~i~~~ 252 (464)
.... .+.. ...+.+..++.++ .++++|+++++.+.+. +. ..++.+++||
T Consensus 174 ---~~~~---------------~~~~---------~~~~~~~~~~~~~~~~vi~~S~~~~~~l~~~-g~~~~~~~~i~~g 225 (413)
T 2x0d_A 174 ---PGFY---------------QWSS---------QYVLAESTYKYRGPQIAVFNSELLKQYFNNK-GYNFTDEYFFQPK 225 (413)
T ss_dssp ---GGGS---------------CSSH---------HHHHHHHTTSCCSCEEEEEESHHHHHHHHHH-TCCCSEEEEECCC
T ss_pred ---hhcC---------------ccCh---------HHHHHHHHhccCCceEEEEcCHHHHHHHHHc-CCCCCceEEeCCC
Confidence 0000 0000 0112345556665 5899999999999886 33 3578899999
Q ss_pred CCCCCCccCCCCCCCCCcEEEEEecc-CCCCChHHHHHHHHHHHHHhcCCCCC---cEEEEEcCCCCCccHHHHHHHHHH
Q 012436 253 CDTSGLQVLPLERSTEYPAIISVAQF-RPEKAHPLQLEAFSVALRKLDADLPR---PRLQFVGSCRNKSDEERLQSLKDK 328 (464)
Q Consensus 253 ~d~~~~~~~~~~~~~~~~~i~~~G~~-~~~K~~~~ll~a~~~l~~~~~~~~p~---~~l~i~G~~~~~~~~~~~~~l~~~ 328 (464)
+|.+.+..... ..++...++++||+ .+.||++.+++|++.+.++. |+ ++|+++|+++..
T Consensus 226 ~d~~~~~~~~~-~~~~~~~il~~gr~~~~~Kg~~~li~A~~~l~~~~----~~~~~~~l~ivG~~~~~------------ 288 (413)
T 2x0d_A 226 INTTLKNYIND-KRQKEKIILVYGRPSVKRNAFTLIVEALKIFVQKY----DRSNEWKIISVGEKHKD------------ 288 (413)
T ss_dssp CCHHHHTTTTS-CCCCCSEEEEEECTTCGGGCHHHHHHHHHHHHHHC----TTGGGCEEEEEESCCCC------------
T ss_pred cCchhhccccc-ccCCCCEEEEEecCchhccCHHHHHHHHHHHHHhC----CCCCceEEEEEcCCchh------------
Confidence 98764432111 22345688999996 68899999999999998765 44 899999998643
Q ss_pred HHhcCCCCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC
Q 012436 329 SIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ 408 (464)
Q Consensus 329 ~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~ 408 (464)
.++++.++|+|+|+++.+|+.++|++||++++||..|+||++++||||||+|||+++ +|. .|++.+ +.+|++++
T Consensus 289 -~~l~~~~~v~f~G~~~~~~l~~~~~~adv~v~pS~~E~~g~~~lEAmA~G~PVV~~~-~g~-~e~v~~---~~~G~lv~ 362 (413)
T 2x0d_A 289 -IALGKGIHLNSLGKLTLEDYADLLKRSSIGISLMISPHPSYPPLEMAHFGLRVITNK-YEN-KDLSNW---HSNIVSLE 362 (413)
T ss_dssp -EEEETTEEEEEEESCCHHHHHHHHHHCCEEECCCSSSSCCSHHHHHHHTTCEEEEEC-BTT-BCGGGT---BTTEEEES
T ss_pred -hhcCCcCcEEEcCCCCHHHHHHHHHhCCEEEEecCCCCCCcHHHHHHhCCCcEEEeC-CCc-chhhhc---CCCEEEeC
Confidence 245667799999999999999999999999999999999999999999999999965 555 688888 88998875
Q ss_pred --CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHh
Q 012436 409 --NAEEYADAIVKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIRPILC 460 (464)
Q Consensus 409 --~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 460 (464)
|+++++++|.++++ |++.+++ ++++.+++|+|+...++ .++|+++..
T Consensus 363 ~~d~~~la~ai~~ll~-~~~~~~~---~~~~~~~~~~W~~~~~~-~~~~~~l~~ 411 (413)
T 2x0d_A 363 QLNPENIAETLVELCM-SFNNRDV---DKKESSNMMFYINEFNE-FSFIKEIEE 411 (413)
T ss_dssp SCSHHHHHHHHHHHHH-HTC----------CCBSCGGGCCCC----TTHHHHHT
T ss_pred CCCHHHHHHHHHHHHc-CHHHHHH---hHHHHHHhCCHHHHHHH-HHHHHHHHh
Confidence 99999999999999 8887766 55555578999999887 677776654
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-34 Score=278.56 Aligned_cols=244 Identities=14% Similarity=0.073 Sum_probs=187.9
Q ss_pred CCcEEEecccccccc-hhhhccCceEEEEeeCCcchhhhhhcccccccccCCCcccccchhhhHHHHHHHHHHHHHHHHH
Q 012436 140 TPLYYFDTSGYAFTY-PLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLV 218 (464)
Q Consensus 140 ~~Dvv~~~~~~~~~~-~~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (464)
++|+||...+....+ .+++..++|++++.|....... . . ......+.++..
T Consensus 124 ~~DvIh~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~----------------------~-~-----~~~~~~~~~~~~ 175 (406)
T 2hy7_A 124 ESDVIVFESGIAVAFIELAKRVNPAAKLVYRASDGLST----------------------I-N-----VASYIEREFDRV 175 (406)
T ss_dssp HCSEEEEESSGGGGGHHHHHHHCTTSEEEEEESSCHHH----------------------H-T-----CCHHHHHHHHHH
T ss_pred CCCEEEECCchHHHHHHHHHHhCCCEEEEEeccchhhc----------------------c-c-----ccHHHHHHHHHH
Confidence 689999444433321 3566789999999994321000 0 0 011223456778
Q ss_pred hhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCCCCCCCCCcEEEEEeccCCCCChHHHHHHHHHHHHHh
Q 012436 219 GSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKL 298 (464)
Q Consensus 219 ~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~ 298 (464)
++.+|.++++|+..++.+.+.+ ++.+||||+|.+.+.+......+++++++|+|++.+.||+ +..+.+..
T Consensus 176 ~~~ad~vi~~S~~~~~~~~~~~----~i~vipngvd~~~f~~~~~~~~~~~~~i~~vGrl~~~Kg~------~~~l~~~~ 245 (406)
T 2hy7_A 176 APTLDVIALVSPAMAAEVVSRD----NVFHVGHGVDHNLDQLGDPSPYAEGIHAVAVGSMLFDPEF------FVVASKAF 245 (406)
T ss_dssp GGGCSEEEESCGGGGGGCSCST----TEEECCCCBCTTHHHHHCSCSCCSSEEEEEECCTTBCHHH------HHHHHHHC
T ss_pred HHhCCEEEEcCHHHHHHHHhcC----CEEEEcCCcChHhcCcccccccCCCcEEEEEeccccccCH------HHHHHHhC
Confidence 8999999999999998876542 8999999999887754322222334799999999999998 33344443
Q ss_pred cCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHH--
Q 012436 299 DADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYM-- 376 (464)
Q Consensus 299 ~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~-- 376 (464)
|+++|+|+|+|+ ++++++.++|.|+|+++++++.++|++||++++||..|++|++++|||
T Consensus 246 ----~~~~l~ivG~g~--------------~~~~~l~~~V~f~G~~~~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~K 307 (406)
T 2hy7_A 246 ----PQVTFHVIGSGM--------------GRHPGYGDNVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMK 307 (406)
T ss_dssp ----TTEEEEEESCSS--------------CCCTTCCTTEEEECCCCHHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHH
T ss_pred ----CCeEEEEEeCch--------------HHhcCCCCCEEEcCCCCHHHHHHHHHhcCEEEECCCcccCchHHHHHHHH
Confidence 699999999874 456677889999999999999999999999999999999999999999
Q ss_pred -----HhCCcEEEeCCCCCccceecccCCccceee-cC--CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHccCHHHHH
Q 012436 377 -----AAGAIPIAHNSAGPKMDIVLEEDGQQTGFL-AQ--NAEEYADAIVKIISMPETERLEMAAAARRRAARFSEQRFY 448 (464)
Q Consensus 377 -----a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~-~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 448 (464)
|||+|||+|+. +.+ +.+|++ ++ |+++++++|.++++ |++ ++..++|+|+.++
T Consensus 308 l~eYla~G~PVIas~~-------v~~---~~~G~l~v~~~d~~~la~ai~~ll~-~~~---------~~~~~~~sw~~~a 367 (406)
T 2hy7_A 308 LLQYDFFGLPAVCPNA-------VVG---PYKSRFGYTPGNADSVIAAITQALE-APR---------VRYRQCLNWSDTT 367 (406)
T ss_dssp HHHHHHHTCCEEEEGG-------GTC---SCSSEEEECTTCHHHHHHHHHHHHH-CCC---------CCCSCCCBHHHHH
T ss_pred HHHHhhCCCcEEEehh-------ccc---CcceEEEeCCCCHHHHHHHHHHHHh-Ccc---------hhhhhcCCHHHHH
Confidence 99999999986 445 678888 65 99999999999999 876 1223789999999
Q ss_pred HHHHHH--HHHHH
Q 012436 449 EDFKAA--IRPIL 459 (464)
Q Consensus 449 ~~~~~~--~~~~~ 459 (464)
+++.++ |+++.
T Consensus 368 ~~~~~~~~y~~~~ 380 (406)
T 2hy7_A 368 DRVLDPRAYPETR 380 (406)
T ss_dssp HHHHCGGGSGGGB
T ss_pred HHHHHhhcccccC
Confidence 999998 76543
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-31 Score=270.23 Aligned_cols=330 Identities=12% Similarity=0.087 Sum_probs=239.4
Q ss_pred ccccceEEEecCCCCCCCCcchhhHHHHHH--hhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeecc
Q 012436 31 RNRTTSVAFFHPNTNDGGGGERVLWCAVKA--IQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRR 108 (464)
Q Consensus 31 ~~~~mkI~~~~~~~~~~GG~~~~~~~l~~~--L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (464)
..++|||+++.+.+..+ |+++++..+++. +.+.| ++|++++.... ........... .+ .+..+.
T Consensus 202 ~~~~~rI~~~~~~~~~~-g~~~~~~~l~~~L~~~~~~--~~v~~~~~~~~-~~~~~~~~~~~-~~-------~~~~~~-- 267 (568)
T 2vsy_A 202 SKGPLRVGFVSNGFGAH-PTGLLTVALFEALQRRQPD--LQMHLFATSGD-DGSTLRTRLAQ-AS-------TLHDVT-- 267 (568)
T ss_dssp SSSCEEEEEEESCSSSS-HHHHHHHHHHHHHHHHCTT--EEEEEEESSCC-CSCHHHHHHHH-TS-------EEEECT--
T ss_pred CCCCeEEEEECcccccC-hHHHHHHHHHhhccCCccc--EEEEEEECCCC-CccHHHHHHHh-cC-------eEEECC--
Confidence 46789999999988765 899999999999 77777 67777765321 01222222211 00 111100
Q ss_pred cccccccCcceehhhhchhhhHHHHHHhhhcCCcEEEeccccccc--chhhhccCceEEEEeeC-Ccchhhhhhcccccc
Q 012436 109 KWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFT--YPLARIFGCRVICYTHY-PTISLDMISRVREGS 185 (464)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~--~~~~~~~~~p~v~~~h~-p~~~~~~~~~~~~~~ 185 (464)
. .....+.+.+++.+||+||++.++... +.+......|++++.|. +...
T Consensus 268 ---------~--------~~~~~l~~~i~~~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 319 (568)
T 2vsy_A 268 ---------A--------LGHLATAKHIRHHGIDLLFDLRGWGGGGRPEVFALRPAPVQVNWLAYPGTS----------- 319 (568)
T ss_dssp ---------T--------CCHHHHHHHHHHTTCSEEEECSSCTTCSSCHHHHTCCSSEEEEESSSSSCC-----------
T ss_pred ---------C--------CCHHHHHHHHHhCCCCEEEECCCCCCcchHHHHhcCCCceeEeeecCCccc-----------
Confidence 0 012345567888999999976554422 22222345677777762 2100
Q ss_pred cccCCCcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCc----cC
Q 012436 186 SMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQ----VL 261 (464)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~----~~ 261 (464)
. .. ...+..+|.++++|+..++ + .+++.+|||.++..... +.
T Consensus 320 ------------~-~~--------------~~~~~~~d~~i~~s~~~~~-----~--~~~i~~ipn~~~~~~~~~~~~~~ 365 (568)
T 2vsy_A 320 ------------G-AP--------------WMDYVLGDAFALPPALEPF-----Y--SEHVLRLQGAFQPSDTSRVVAEP 365 (568)
T ss_dssp ------------C-CT--------------TCCEEEECTTTSCTTTGGG-----C--SSEEEECSSCSCCCCTTCCCCCC
T ss_pred ------------C-CC--------------CceEEEECCCcCCcccccC-----C--cceeEcCCCcCCCCCCCCCCCCC
Confidence 0 00 0001357888888887654 3 37889999965543211 00
Q ss_pred CCCC---CCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEc-CCCCCccHHHHHHHHHHHHhcCCC-C
Q 012436 262 PLER---STEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVG-SCRNKSDEERLQSLKDKSIELKVD-G 336 (464)
Q Consensus 262 ~~~~---~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G-~~~~~~~~~~~~~l~~~~~~~~l~-~ 336 (464)
+... .++...++++|++.+ ||++.+++++..+.++. |+++|+|+| +|+ ..+++++.++++|+. +
T Consensus 366 ~~r~~~~~~~~~~v~~~g~~~~-K~~~~li~a~~~l~~~~----~~~~l~i~G~~g~------~~~~l~~~~~~~~l~~~ 434 (568)
T 2vsy_A 366 PSRTQCGLPEQGVVLCCFNNSY-KLNPQSMARMLAVLREV----PDSVLWLLSGPGE------ADARLRAFAHAQGVDAQ 434 (568)
T ss_dssp CCTGGGTCCTTSCEEEECCCGG-GCCHHHHHHHHHHHHHC----TTCEEEEECCSTT------HHHHHHHHHHHTTCCGG
T ss_pred CCccccCCCCCCEEEEeCCccc-cCCHHHHHHHHHHHHhC----CCcEEEEecCCHH------HHHHHHHHHHHcCCChh
Confidence 1000 123346779999999 99999999999998776 699999999 664 347899999999998 8
Q ss_pred cEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEE-------eCCC-------CCccceecccCCcc
Q 012436 337 NVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIA-------HNSA-------GPKMDIVLEEDGQQ 402 (464)
Q Consensus 337 ~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~-------~~~~-------~~~~~~v~~~~~~~ 402 (464)
+|+|+|+++++++.++|+.||++|+||.. ++|++++|||+||+|||+ |+.+ |. .+++.
T Consensus 435 ~v~~~g~~~~~~~~~~~~~adv~v~ps~~-~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~-~e~v~------ 506 (568)
T 2vsy_A 435 RLVFMPKLPHPQYLARYRHADLFLDTHPY-NAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGL-DEMNV------ 506 (568)
T ss_dssp GEEEECCCCHHHHHHHGGGCSEEECCSSS-CCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTC-GGGBC------
T ss_pred HEEeeCCCCHHHHHHHHhcCCEEeeCCCC-CCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHCCC-hhhhc------
Confidence 99999999999999999999999999998 999999999999999999 8877 55 34442
Q ss_pred ceeecCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH---HccCHHHHHHHHHHHHHHHHhh
Q 012436 403 TGFLAQNAEEYADAIVKIISMPETERLEMAAAARRRA---ARFSEQRFYEDFKAAIRPILCH 461 (464)
Q Consensus 403 ~g~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~---~~~s~~~~~~~~~~~~~~~~~~ 461 (464)
+|+++++++|.++++ |++.++++++++++.+ +.|+|+.+++++.++|++++..
T Consensus 507 -----~~~~~la~~i~~l~~-~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~y~~~~~~ 562 (568)
T 2vsy_A 507 -----ADDAAFVAKAVALAS-DPAALTALHARVDVLRRASGVFHMDGFADDFGALLQALARR 562 (568)
T ss_dssp -----SSHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHT
T ss_pred -----CCHHHHHHHHHHHhc-CHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 389999999999999 9999999999999988 6799999999999999998765
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-32 Score=258.83 Aligned_cols=337 Identities=12% Similarity=0.049 Sum_probs=231.1
Q ss_pred cceEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeeccccccc
Q 012436 34 TTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEE 113 (464)
Q Consensus 34 ~mkI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (464)
+|||+++... .||.++.+..++++|.+.| ++|.+++.... . . .......++ +++.++...+...
T Consensus 6 ~mkIl~~~~~---~gG~~~~~~~la~~L~~~G--~~V~v~~~~~~---~-~-~~~~~~~g~------~~~~~~~~~~~~~ 69 (364)
T 1f0k_A 6 GKRLMVMAGG---TGGHVFPGLAVAHHLMAQG--WQVRWLGTADR---M-E-ADLVPKHGI------EIDFIRISGLRGK 69 (364)
T ss_dssp -CEEEEECCS---SHHHHHHHHHHHHHHHTTT--CEEEEEECTTS---T-H-HHHGGGGTC------EEEECCCCCCTTC
T ss_pred CcEEEEEeCC---CccchhHHHHHHHHHHHcC--CEEEEEecCCc---c-h-hhhccccCC------ceEEecCCccCcC
Confidence 3899999632 2689999999999999999 55556554321 1 1 111111233 3333322211100
Q ss_pred ccCcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccc--hhhhccCceEEEEeeCCcchhhhhhcccccccccCCC
Q 012436 114 STYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTY--PLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNN 191 (464)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~--~~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~ 191 (464)
.....+......+.....+.+.+++.+||+||.+....... ..++..++|+|++.|....
T Consensus 70 ~~~~~~~~~~~~~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~------------------ 131 (364)
T 1f0k_A 70 GIKALIAAPLRIFNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGIA------------------ 131 (364)
T ss_dssp CHHHHHTCHHHHHHHHHHHHHHHHHHCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSSC------------------
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCCCC------------------
Confidence 00001111112223445566778888999999876543221 2556789999998883210
Q ss_pred cccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCC----CCCCC
Q 012436 192 ASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLP----LERST 267 (464)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~----~~~~~ 267 (464)
. ...++..+.+|.+++.++.. + + ++.+++||++.+.+.... ....+
T Consensus 132 ------~--------------~~~~~~~~~~d~v~~~~~~~-------~--~-~~~~i~n~v~~~~~~~~~~~~~~~~~~ 181 (364)
T 1f0k_A 132 ------G--------------LTNKWLAKIATKVMQAFPGA-------F--P-NAEVVGNPVRTDVLALPLPQQRLAGRE 181 (364)
T ss_dssp ------C--------------HHHHHHTTTCSEEEESSTTS-------S--S-SCEECCCCCCHHHHTSCCHHHHHTTCC
T ss_pred ------c--------------HHHHHHHHhCCEEEecChhh-------c--C-CceEeCCccchhhcccchhhhhcccCC
Confidence 0 01244558899999988764 2 2 678999999876543211 01123
Q ss_pred CCc-EEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcE-EEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCC
Q 012436 268 EYP-AIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPR-LQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLL 345 (464)
Q Consensus 268 ~~~-~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~-l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~ 345 (464)
+.+ ++++.|++.+.|+.+.+++|++.+.+ +++ ++++|+++ .+++++.++++++. +|.|.|++
T Consensus 182 ~~~~il~~~g~~~~~k~~~~li~a~~~l~~-------~~~~l~i~G~~~-------~~~l~~~~~~~~~~-~v~~~g~~- 245 (364)
T 1f0k_A 182 GPVRVLVVGGSQGARILNQTMPQVAAKLGD-------SVTIWHQSGKGS-------QQSVEQAYAEAGQP-QHKVTEFI- 245 (364)
T ss_dssp SSEEEEEECTTTCCHHHHHHHHHHHHHHGG-------GEEEEEECCTTC-------HHHHHHHHHHTTCT-TSEEESCC-
T ss_pred CCcEEEEEcCchHhHHHHHHHHHHHHHhcC-------CcEEEEEcCCch-------HHHHHHHHhhcCCC-ceEEecch-
Confidence 334 45566789999999999999998843 466 56788775 16788888888864 79999999
Q ss_pred hhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCc-------cceecccCCccceeecC--C--HHHHH
Q 012436 346 YRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPK-------MDIVLEEDGQQTGFLAQ--N--AEEYA 414 (464)
Q Consensus 346 ~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~-------~~~v~~~~~~~~g~~~~--~--~~~la 414 (464)
+++.++|+.||++|+||. |++++|||++|+|||+++.+|.. .+++.+ +.|++++ | +++++
T Consensus 246 -~~~~~~~~~ad~~v~~sg----~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~----g~g~~~~~~d~~~~~la 316 (364)
T 1f0k_A 246 -DDMAAAYAWADVVVCRSG----ALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKA----GAAKIIEQPQLSVDAVA 316 (364)
T ss_dssp -SCHHHHHHHCSEEEECCC----HHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHT----TSEEECCGGGCCHHHHH
T ss_pred -hhHHHHHHhCCEEEECCc----hHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhC----CcEEEeccccCCHHHHH
Confidence 899999999999999973 89999999999999999988762 145554 5598886 5 89999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhhc
Q 012436 415 DAIVKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIRPILCHA 462 (464)
Q Consensus 415 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 462 (464)
++|.++ |++.++++++++++.+++|+|+.+++++.++|++.-.++
T Consensus 317 ~~i~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~ 361 (364)
T 1f0k_A 317 NTLAGW---SRETLLTMAERARAASIPDATERVANEVSRVARALEHHH 361 (364)
T ss_dssp HHHHTC---CHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHTTC----
T ss_pred HHHHhc---CHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHhhc
Confidence 999988 788899999999987788999999999999998765543
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.97 E-value=8.4e-31 Score=251.99 Aligned_cols=276 Identities=12% Similarity=0.004 Sum_probs=198.5
Q ss_pred hHHHHHHhhhcCCcEEEecccc-cccc--hhhhccCceEEEEeeCCcchhhhhhcccccccccCCCcccccchhhhHHHH
Q 012436 129 VYLSWEALCKFTPLYYFDTSGY-AFTY--PLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKI 205 (464)
Q Consensus 129 ~~~~~~~l~~~~~Dvv~~~~~~-~~~~--~~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (464)
...+.+.+++.+||+||.+... .... ..++..++|++.+.|... . . ..| ..+.. .
T Consensus 84 ~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~-------~-~---~~~--------~~~~~---~ 141 (375)
T 3beo_A 84 LEGLDKVMKEAKPDIVLVHGDTTTTFIASLAAFYNQIPVGHVEAGLR-------T-W---DKY--------SPYPE---E 141 (375)
T ss_dssp HHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHHTTCCEEEESCCCC-------C-S---CTT--------SSTTH---H
T ss_pred HHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEecccc-------c-c---ccc--------CCChh---H
Confidence 4456677888999999976542 2222 145578999987655210 0 0 000 00000 0
Q ss_pred HHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCC-CCCeEEecCC-CCCCCCccCC-C------CCCCCCcEEEEEe
Q 012436 206 VYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPP-CDTSGLQVLP-L------ERSTEYPAIISVA 276 (464)
Q Consensus 206 ~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~-~~~i~~i~~~-~d~~~~~~~~-~------~~~~~~~~i~~~G 276 (464)
...+...+.+|.++++|+..++.+.+. +. ++++.+++|| +|...+.... . ...+++++++++|
T Consensus 142 -------~~~~~~~~~~d~ii~~s~~~~~~~~~~-g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~~~~~~vl~~~g 213 (375)
T 3beo_A 142 -------MNRQLTGVMADLHFSPTAKSATNLQKE-NKDESRIFITGNTAIDALKTTVKETYSHPVLEKLGNNRLVLMTAH 213 (375)
T ss_dssp -------HHHHHHHHHCSEEEESSHHHHHHHHHT-TCCGGGEEECCCHHHHHHHHHCCSSCCCHHHHTTTTSEEEEEECC
T ss_pred -------hhhhHHhhhhheeeCCCHHHHHHHHHc-CCCcccEEEECChhHhhhhhhhhhhhhHHHHHhccCCCeEEEEec
Confidence 011223356999999999999999875 54 5689999999 6654332111 0 0023445678899
Q ss_pred ccCCC-CChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHHHhc
Q 012436 277 QFRPE-KAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGG 355 (464)
Q Consensus 277 ~~~~~-K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ 355 (464)
++.+. ||++.+++|++.+.++. |++++++ |.+++ ..+.+.+++.+ +..++|.|+|+++..++.++|+.
T Consensus 214 r~~~~~K~~~~li~a~~~l~~~~----~~~~~i~-~~g~~---~~~~~~~~~~~---~~~~~v~~~g~~~~~~~~~~~~~ 282 (375)
T 3beo_A 214 RRENLGEPMRNMFRAIKRLVDKH----EDVQVVY-PVHMN---PVVRETANDIL---GDYGRIHLIEPLDVIDFHNVAAR 282 (375)
T ss_dssp CGGGTTHHHHHHHHHHHHHHHHC----TTEEEEE-ECCSC---HHHHHHHHHHH---TTCTTEEEECCCCHHHHHHHHHT
T ss_pred ccccchhHHHHHHHHHHHHHhhC----CCeEEEE-eCCCC---HHHHHHHHHHh---hccCCEEEeCCCCHHHHHHHHHh
Confidence 98775 99999999999998765 5888654 65543 12233444332 22368999999999999999999
Q ss_pred CcEEEEcCCCCCCChHHHHHHHhCCcEEEeCC-CCCccceecccCCccceeecC-CHHHHHHHHHHHHcCCHHHHHHHHH
Q 012436 356 AVVGIHSMIDEHFGISVVEYMAAGAIPIAHNS-AGPKMDIVLEEDGQQTGFLAQ-NAEEYADAIVKIISMPETERLEMAA 433 (464)
Q Consensus 356 ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~-~~~~~~~v~~~~~~~~g~~~~-~~~~la~~i~~l~~~~~~~~~~~~~ 433 (464)
||++++|| |.+++|||++|+|||+++. ++. .+++.+ + +|++++ |+++++++|.++++ |++.++++++
T Consensus 283 ad~~v~~s-----g~~~lEA~a~G~Pvi~~~~~~~~-~e~v~~---g-~g~~v~~d~~~la~~i~~ll~-~~~~~~~~~~ 351 (375)
T 3beo_A 283 SYLMLTDS-----GGVQEEAPSLGVPVLVLRDTTER-PEGIEA---G-TLKLAGTDEETIFSLADELLS-DKEAHDKMSK 351 (375)
T ss_dssp CSEEEECC-----HHHHHHHHHHTCCEEECSSCCSC-HHHHHT---T-SEEECCSCHHHHHHHHHHHHH-CHHHHHHHCC
T ss_pred CcEEEECC-----CChHHHHHhcCCCEEEecCCCCC-ceeecC---C-ceEEcCCCHHHHHHHHHHHHh-ChHhHhhhhh
Confidence 99999998 6679999999999999964 776 788877 5 999985 99999999999999 9999999999
Q ss_pred HHHHHHHccCHHHHHHHHHHHHH
Q 012436 434 AARRRAARFSEQRFYEDFKAAIR 456 (464)
Q Consensus 434 ~~~~~~~~~s~~~~~~~~~~~~~ 456 (464)
+++++.+.|+|+.+++.+.+.++
T Consensus 352 ~~~~~~~~~~~~~i~~~~~~~~~ 374 (375)
T 3beo_A 352 ASNPYGDGRASERIVEAILKHFN 374 (375)
T ss_dssp CCCTTCCSCHHHHHHHHHHHHTT
T ss_pred cCCCCCCCcHHHHHHHHHHHHhh
Confidence 88776678999999999887653
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-30 Score=251.62 Aligned_cols=355 Identities=12% Similarity=0.028 Sum_probs=232.3
Q ss_pred ceEEEecCCCCCCCCcchhhHHHHHHhhhhCC-CCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeeccccccc
Q 012436 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESP-DLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEE 113 (464)
Q Consensus 35 mkI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (464)
|||+++....+ + ...+..++++|.+.|+ ++++++. +.. ..........+++... +.+....
T Consensus 1 mkIl~v~~~~~---~-~~~~~~l~~~L~~~g~~~~~v~~~-~~~----~~~~~~~~~~~~~~~~-----~~~~~~~---- 62 (384)
T 1vgv_A 1 MKVLTVFGTRP---E-AIKMAPLVHALAKDPFFEAKVCVT-AQH----REMLDQVLKLFSIVPD-----YDLNIMQ---- 62 (384)
T ss_dssp CEEEEEECSHH---H-HHHHHHHHHHHHHSTTCEEEEEEC-CSS----GGGGHHHHHHHTCCCS-----EECCCCS----
T ss_pred CeEEEEecccH---H-HHHHHHHHHHHHhCCCCceEEEEc-CCC----HHHHHHHHHHcCCCCC-----cceecCC----
Confidence 78999865431 2 2335688999999984 6665543 322 1111122222333110 1111110
Q ss_pred ccCcceehhhhchhhhHHHHHHhhhcCCcEEEeccc-ccccc-h-hhhccCceEEEEeeCCcchhhhhhcccccccccCC
Q 012436 114 STYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSG-YAFTY-P-LARIFGCRVICYTHYPTISLDMISRVREGSSMYNN 190 (464)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~-~~~~~-~-~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~ 190 (464)
... ............+.+.+++.+||+||.+.. ..... . .++..++|++.+.|.... . ..+
T Consensus 63 ~~~---~~~~~~~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~~--------~---~~~-- 126 (384)
T 1vgv_A 63 PGQ---GLTEITCRILEGLKPILAEFKPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLRT--------G---DLY-- 126 (384)
T ss_dssp TTS---CHHHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCCC--------S---CTT--
T ss_pred CCc---cHHHHHHHHHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEeccccc--------c---ccc--
Confidence 000 000001223456667788999999997654 22221 1 456789999887773110 0 000
Q ss_pred CcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCC-CCCeEEecCCC-CCCCCccC-------
Q 012436 191 NASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPC-DTSGLQVL------- 261 (464)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~-~~~i~~i~~~~-d~~~~~~~------- 261 (464)
..+... . ....+.+.+|.++++|+..++.+.+. +. ++++.+++||+ |...+...
T Consensus 127 ------~~~~~~---~-------~~~~~~~~~d~ii~~s~~~~~~l~~~-g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~ 189 (384)
T 1vgv_A 127 ------SPWPEE---A-------NRTLTGHLAMYHFSPTETSRQNLLRE-NVADSRIFITGNTVIDALLWVRDQVMSSDK 189 (384)
T ss_dssp ------SSTTHH---H-------HHHHHHTTCSEEEESSHHHHHHHHHT-TCCGGGEEECCCHHHHHHHHHHHHTTTCHH
T ss_pred ------CCCchH---h-------hHHHHHhhccEEEcCcHHHHHHHHHc-CCChhhEEEeCChHHHHHHhhhhccccchh
Confidence 001000 0 01122467999999999999999775 54 56799999984 32111100
Q ss_pred -------CCC-C-CCCCcEEEEEeccCCC-CChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHh
Q 012436 262 -------PLE-R-STEYPAIISVAQFRPE-KAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIE 331 (464)
Q Consensus 262 -------~~~-~-~~~~~~i~~~G~~~~~-K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~ 331 (464)
... . .+++.+++++|++.+. ||++.+++|+..+.++. |++++++.++. . ....+.+++.+..
T Consensus 190 ~~~~~~~~~~~~~~~~~~vl~~~gr~~~~~kg~~~li~a~~~l~~~~----~~~~l~i~~g~-~---~~~~~~l~~~~~~ 261 (384)
T 1vgv_A 190 LRSELAANYPFIDPDKKMILVTGHRRESFGRGFEEICHALADIATTH----QDIQIVYPVHL-N---PNVREPVNRILGH 261 (384)
T ss_dssp HHHHHHTTCTTCCTTSEEEEEECCCBSSCCHHHHHHHHHHHHHHHHC----TTEEEEEECCB-C---HHHHHHHHHHHTT
T ss_pred hhHHHHHhccccCCCCCEEEEEeCCccccchHHHHHHHHHHHHHhhC----CCeEEEEEcCC-C---HHHHHHHHHHhhc
Confidence 000 1 1233578899999876 99999999999998776 58888886332 1 1234555555432
Q ss_pred cCCCCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCC-CCCccceecccCCccceeecC-C
Q 012436 332 LKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNS-AGPKMDIVLEEDGQQTGFLAQ-N 409 (464)
Q Consensus 332 ~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~-~~~~~~~v~~~~~~~~g~~~~-~ 409 (464)
.++|.|+|+++.+++.++|+.||++|+|| |.+++|||++|+|||+++. ++. .+++.+ + +|++++ |
T Consensus 262 ---~~~v~~~g~~~~~~~~~~~~~ad~~v~~S-----g~~~lEA~a~G~PvI~~~~~~~~-~e~v~~---g-~g~lv~~d 328 (384)
T 1vgv_A 262 ---VKNVILIDPQEYLPFVWLMNHAWLILTDS-----GGIQEEAPSLGKPVLVMRDTTER-PEAVTA---G-TVRLVGTD 328 (384)
T ss_dssp ---CTTEEEECCCCHHHHHHHHHHCSEEEESS-----STGGGTGGGGTCCEEEESSCCSC-HHHHHH---T-SEEEECSS
T ss_pred ---CCCEEEeCCCCHHHHHHHHHhCcEEEECC-----cchHHHHHHcCCCEEEccCCCCc-chhhhC---C-ceEEeCCC
Confidence 36899999998899999999999999998 4458999999999999986 666 788877 5 999986 9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhhc
Q 012436 410 AEEYADAIVKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIRPILCHA 462 (464)
Q Consensus 410 ~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 462 (464)
+++++++|.++++ |++.+++|+++++++.+.++|+.+++.+.++++++.+.+
T Consensus 329 ~~~la~~i~~ll~-d~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 380 (384)
T 1vgv_A 329 KQRIVEEVTRLLK-DENEYQAMSRAHNPYGDGQACSRILEALKNNRISLGSHH 380 (384)
T ss_dssp HHHHHHHHHHHHH-CHHHHHHHHSSCCTTCCSCHHHHHHHHHHHTCCCC----
T ss_pred HHHHHHHHHHHHh-ChHHHhhhhhccCCCcCCCHHHHHHHHHHHHHHhhcccc
Confidence 9999999999999 999999999988876688999999999999888776544
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.1e-28 Score=238.30 Aligned_cols=284 Identities=14% Similarity=0.166 Sum_probs=202.6
Q ss_pred CCcEEEecccccccch--hhh-ccCceEEEEeeCCcchhhhhhcccccccccCCCcccccchhhhHHHHHHHHHHHHHHH
Q 012436 140 TPLYYFDTSGYAFTYP--LAR-IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYG 216 (464)
Q Consensus 140 ~~Dvv~~~~~~~~~~~--~~~-~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (464)
++|+||.|..+...++ +.+ ..++|+++++|.|....+....+. + ... + .
T Consensus 123 ~~DiV~vHdyhl~~l~~~lr~~~~~~~i~~~~H~pfp~~~~~~~lp----------------~-------~~~----i-l 174 (482)
T 1uqt_A 123 DDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEIFNALP----------------T-------YDT----L-L 174 (482)
T ss_dssp TTCEEEEESGGGTTHHHHHHHTTCCSCEEEECCSCCCCHHHHTTST----------------T-------HHH----H-H
T ss_pred CCCEEEEECchHHHHHHHHHHhCCCCcEEEEEcCCCCCHHHHhhCc----------------c-------HHH----H-H
Confidence 5699998876655555 333 348999999997643222111100 0 000 0 1
Q ss_pred HHhhcCCEEEEcCHHHHHHHHH-----------------HhCCCCCeEEecCCCCCCCCccCCCC-----------CCCC
Q 012436 217 LVGSCADLAMVNSSWTQSHIEK-----------------LWGIPDRIKRVYPPCDTSGLQVLPLE-----------RSTE 268 (464)
Q Consensus 217 ~~~~~ad~vi~~S~~~~~~~~~-----------------~~~~~~~i~~i~~~~d~~~~~~~~~~-----------~~~~ 268 (464)
..+..+|.+...+....+.+.. .++...++.++|||+|.+.|.+.... .-.+
T Consensus 175 ~~ll~~d~i~f~~~~~~~~f~~~~~~~l~~~~~~~~~~~~~g~~~~v~vip~GID~~~f~~~~~~~~~~~~~~lr~~~~~ 254 (482)
T 1uqt_A 175 EQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELKN 254 (482)
T ss_dssp HHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTTEEEETTEEEEEEECCCCCCHHHHHHHHHSCCCHHHHHHHHHTTT
T ss_pred HhhhccCeEEEECHHHHHHHHHHHHHHhCCccccCCeEEECCeEEEEEEEeccCCHHHHHHHhcCcchHHHHHHHHHhCC
Confidence 1124567777766655544432 12223578899999998766531100 0125
Q ss_pred CcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCc---cHHHHHHHHHHHHhcC----CC--CcEE
Q 012436 269 YPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKS---DEERLQSLKDKSIELK----VD--GNVE 339 (464)
Q Consensus 269 ~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~---~~~~~~~l~~~~~~~~----l~--~~v~ 339 (464)
+++|+++||+.+.||++.+++|++.+.++.++...+++|+++|.+...+ ..++.+++++++.+++ .. ..|+
T Consensus 255 ~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~p~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~ 334 (482)
T 1uqt_A 255 VQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLY 334 (482)
T ss_dssp CEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEE
T ss_pred CEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEEEECCCccchHHHHHHHHHHHHHHHHHhhhcccCCCceEE
Confidence 6899999999999999999999999988763211257899999743221 2234556666665532 11 1355
Q ss_pred -EccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCC-----cEEEeCCCCCccceecccCCccceeecC--CHH
Q 012436 340 -FYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGA-----IPIAHNSAGPKMDIVLEEDGQQTGFLAQ--NAE 411 (464)
Q Consensus 340 -~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~-----PvI~~~~~~~~~~~v~~~~~~~~g~~~~--~~~ 411 (464)
+.|.++.+++..+|+.||++++||..||||++++||||||+ |+|+|+.+|..+++ . +|++++ |++
T Consensus 335 ~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~l--~-----~g~lv~p~d~~ 407 (482)
T 1uqt_A 335 YLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL--T-----SALIVNPYDRD 407 (482)
T ss_dssp EECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTC--T-----TSEEECTTCHH
T ss_pred EeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHHh--C-----CeEEECCCCHH
Confidence 57999999999999999999999999999999999999997 89999988774443 2 577775 999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Q 012436 412 EYADAIVKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIRPI 458 (464)
Q Consensus 412 ~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 458 (464)
+++++|.+++++++++++++++++++.+++|||+.+++++++.|+++
T Consensus 408 ~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 408 EVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQI 454 (482)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhc
Confidence 99999999998567788999999999997799999999999999876
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.7e-28 Score=239.12 Aligned_cols=317 Identities=13% Similarity=0.074 Sum_probs=210.3
Q ss_pred cCCcEEEecccccccch-hhh--ccCceEEEEeeCCcchhhhhhcccccccccCCCcccccchhhhHHHHHHHHHHHHHH
Q 012436 139 FTPLYYFDTSGYAFTYP-LAR--IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMY 215 (464)
Q Consensus 139 ~~~Dvv~~~~~~~~~~~-~~~--~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (464)
.+|||+|++.......+ +.+ ..++|.|+|+|...+...+.. ....+.|++ ................-...++
T Consensus 180 ~~pdIiH~HDW~tg~~~~~Lk~~~~~i~tVfTiH~telGR~lag--qg~~~~y~~---L~~~~~d~ea~~~~i~~~~~~E 254 (725)
T 3nb0_A 180 QHAIVAHFHEWLAGVALPLCRKRRIDVVTIFTTHATLLGRYLCA--SGSFDFYNC---LESVDVDHEAGRFGIYHRYCIE 254 (725)
T ss_dssp SEEEEEEEESGGGCTHHHHHHHTTCSCEEEEEESSCHHHHHHTS--SSCSCHHHH---GGGCCHHHHHHHTTCHHHHHHH
T ss_pred CCCcEEEeCchhhhHHHHHHHHhCCCCCEEEEEecchhhhhhhh--cCCCchhhh---hhhcCCChhhhhhchhHHHHHH
Confidence 56999998888777655 333 568999999996432111100 000000000 0000000000000001123467
Q ss_pred HHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCC------------------------CCCC-CCCc
Q 012436 216 GLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLP------------------------LERS-TEYP 270 (464)
Q Consensus 216 ~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~------------------------~~~~-~~~~ 270 (464)
+..+..||.|+++|+..+++++..++.+.+.. ||||+|.+.+.+.. ...+ ++.+
T Consensus 255 Kaga~~AD~ITTVS~~yA~Ei~~Ll~r~~d~i-IpNGID~~~f~p~~~~~~~k~~aK~klq~~l~~~~~~~l~l~~dk~l 333 (725)
T 3nb0_A 255 RAAAHSADVFTTVSQITAFEAEHLLKRKPDGI-LPNGLNVIKFQAFHEFQNLHALKKEKINDFVRGHFHGCFDFDLDNTL 333 (725)
T ss_dssp HHHHHHSSEEEESSHHHHHHHHHHTSSCCSEE-CCCCBCCCCCSSTTHHHHHHHHHHHHHHHHHHHHTTTCCCSCGGGEE
T ss_pred HHHHHhCCEEEECCHHHHHHHHHHhcCCCCEE-EcCCccccccCcchhhHHHHHHHHHHHHHHHHhhcccCCCCCCCcee
Confidence 88889999999999999999999877655544 99999999886420 0111 2335
Q ss_pred EEEEEeccC-CCCChHHHHHHHHHHHHHhc---CCCCCcEEEEEcCCCCCccH---------------------------
Q 012436 271 AIISVAQFR-PEKAHPLQLEAFSVALRKLD---ADLPRPRLQFVGSCRNKSDE--------------------------- 319 (464)
Q Consensus 271 ~i~~~G~~~-~~K~~~~ll~a~~~l~~~~~---~~~p~~~l~i~G~~~~~~~~--------------------------- 319 (464)
.++.+||+. ..||++.+++|+.++....+ .+.+-+.|+++..+......
T Consensus 334 iifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvafii~p~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~ 413 (725)
T 3nb0_A 334 YFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVMPAKNNSFTVEALKGQAEVRALENTVHEVTTSIGKRI 413 (725)
T ss_dssp EEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEEEEeCCCCCCCchhhhcchhHHHHHHHHHHHHHHHHhHHH
Confidence 566689998 78999999999999875521 11124677777765322100
Q ss_pred --------------------------------------------------------HHHHHHHHHHHhcCCCCc------
Q 012436 320 --------------------------------------------------------ERLQSLKDKSIELKVDGN------ 337 (464)
Q Consensus 320 --------------------------------------------------------~~~~~l~~~~~~~~l~~~------ 337 (464)
...+.+.+.++++++.++
T Consensus 414 ~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r~l~L~N~~~drVK 493 (725)
T 3nb0_A 414 FDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNSPSDRVK 493 (725)
T ss_dssp HHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHHHHTCCCCTTCSEE
T ss_pred HHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHHhcCCCCCcCCcee
Confidence 001223334455666555
Q ss_pred EEEc-cCCChh------HHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCC----ccceee
Q 012436 338 VEFY-KNLLYR------DLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDG----QQTGFL 406 (464)
Q Consensus 338 v~~~-g~~~~~------~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~----~~~g~~ 406 (464)
|.|+ ++++.. ++.++|+.||++|+||.+|+||++++||||||+|||+|+.+|. .+.+.+-.+ +.+|++
T Consensus 494 VIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG~-~d~V~dg~~~~~~~~tG~l 572 (725)
T 3nb0_A 494 MIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSGF-GSYMEDLIETNQAKDYGIY 572 (725)
T ss_dssp EEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHHHTTCCEEEETTBHH-HHHHHTTSCHHHHHHTTEE
T ss_pred EEEeccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHHHHHcCCCEEEeCCCCh-hhhhhccccccCCCCceEE
Confidence 4555 666665 5899999999999999999999999999999999999999998 577665110 147876
Q ss_pred cC-----CHHHHHHHH----HHHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhhc
Q 012436 407 AQ-----NAEEYADAI----VKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIRPILCHA 462 (464)
Q Consensus 407 ~~-----~~~~la~~i----~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 462 (464)
+. ++++++++| ..+++.++..+.++++++++.+++|+|+.+++++.++|++++...
T Consensus 573 V~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~~FSWe~iA~~Yl~~Ye~aL~~~ 637 (725)
T 3nb0_A 573 IVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSDLLDWKRMGLEYVKARQLALRRG 637 (725)
T ss_dssp EECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGGGGBHHHHHHHHHHHHHHHHHHH
T ss_pred EeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhc
Confidence 62 555555444 444444777888999998877789999999999999999988653
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.6e-28 Score=203.78 Aligned_cols=163 Identities=19% Similarity=0.221 Sum_probs=138.5
Q ss_pred CcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhH
Q 012436 269 YPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRD 348 (464)
Q Consensus 269 ~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~ 348 (464)
+++|+|+|++.+.||++.+++|+..+++. |+++|+++|+++.. +.+++.++++++ ++.+ |+++.++
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l~~~-----~~~~l~i~G~g~~~------~~~~~~~~~~~~--~v~~-g~~~~~~ 67 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALSKYK-----QDIVLLLKGKGPDE------KKIKLLAQKLGV--KAEF-GFVNSNE 67 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTCTTG-----GGEEEEEECCSTTH------HHHHHHHHHHTC--EEEC-CCCCHHH
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHhccC-----CCeEEEEEeCCccH------HHHHHHHHHcCC--eEEE-eecCHHH
Confidence 47899999999999999999999998533 58999999998653 778888888886 8999 9999999
Q ss_pred HHHHHhcCcEEEEcCCCCCCChHHHHHHHhCC-cEEEe-CCCCCccceecccCCccceeecCCHHHHHHHHHHHHcCCHH
Q 012436 349 LVKLLGGAVVGIHSMIDEHFGISVVEYMAAGA-IPIAH-NSAGPKMDIVLEEDGQQTGFLAQNAEEYADAIVKIISMPET 426 (464)
Q Consensus 349 ~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~-PvI~~-~~~~~~~~~v~~~~~~~~g~~~~~~~~la~~i~~l~~~~~~ 426 (464)
+.++|+.||++++||..|++|++++|||++|+ |||++ +.++. .+++.+ +.+.+...|+++++++|.++++ |++
T Consensus 68 ~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~-~~~~~~---~~~~~~~~~~~~l~~~i~~l~~-~~~ 142 (166)
T 3qhp_A 68 LLEILKTCTLYVHAANVESEAIACLEAISVGIVPVIANSPLSAT-RQFALD---ERSLFEPNNAKDLSAKIDWWLE-NKL 142 (166)
T ss_dssp HHHHHTTCSEEEECCCSCCCCHHHHHHHHTTCCEEEECCTTCGG-GGGCSS---GGGEECTTCHHHHHHHHHHHHH-CHH
T ss_pred HHHHHHhCCEEEECCcccCccHHHHHHHhcCCCcEEeeCCCCch-hhhccC---CceEEcCCCHHHHHHHHHHHHh-CHH
Confidence 99999999999999999999999999999998 99995 45665 788877 5553434499999999999999 999
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHH
Q 012436 427 ERLEMAAAARRRAARFSEQRFYED 450 (464)
Q Consensus 427 ~~~~~~~~~~~~~~~~s~~~~~~~ 450 (464)
.++++++++++.+++|+|+.++++
T Consensus 143 ~~~~~~~~~~~~~~~~s~~~~~~~ 166 (166)
T 3qhp_A 143 ERERMQNEYAKSALNYTLENSVIQ 166 (166)
T ss_dssp HHHHHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHHHHHHHHCChhhhhcC
Confidence 999999999998899999998764
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.9e-26 Score=221.39 Aligned_cols=286 Identities=13% Similarity=0.031 Sum_probs=211.6
Q ss_pred CCcEEEecccccccch--hhh-ccCceEEEEeeCCcchhhhhhcccccccccCCCcccccchhhhHHHHHHHHHHHHHHH
Q 012436 140 TPLYYFDTSGYAFTYP--LAR-IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYG 216 (464)
Q Consensus 140 ~~Dvv~~~~~~~~~~~--~~~-~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (464)
.-|+|..|..+...+| +.+ ..+.++.+++|-|....++.+.+. ...+. ---
T Consensus 149 ~~D~VwVhDYhL~llp~~lR~~~~~~~igfFlHiPfPs~e~f~~Lp----------------------~~~r~----ell 202 (496)
T 3t5t_A 149 ADPVYLVHDYQLVGVPALLREQRPDAPILLFVHIPWPSADYWRILP----------------------KEIRT----GIL 202 (496)
T ss_dssp SSCEEEEESGGGTTHHHHHHHHCTTSCEEEECCSCCCCHHHHTTSC----------------------HHHHH----HHH
T ss_pred CCCEEEEeCccHhHHHHHHHhhCCCCeEEEEEcCCCCCHHHHhhCc----------------------HhHHH----HHH
Confidence 4578877777777666 333 568899999997765444432221 00000 112
Q ss_pred HHhhcCCEEEEcCHHHHHHHHH----Hh-CC--------------CCCeEEecCCCCCCCCccCCCCC-C------CCCc
Q 012436 217 LVGSCADLAMVNSSWTQSHIEK----LW-GI--------------PDRIKRVYPPCDTSGLQVLPLER-S------TEYP 270 (464)
Q Consensus 217 ~~~~~ad~vi~~S~~~~~~~~~----~~-~~--------------~~~i~~i~~~~d~~~~~~~~~~~-~------~~~~ 270 (464)
..+-.+|.|.+.+....+.+.+ .. +. ..++.++|+|+|.+.|.+..... . .+++
T Consensus 203 ~gll~~DligF~t~~y~~~Fl~~~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~~~~~lr~~~~~~~ 282 (496)
T 3t5t_A 203 HGMLPATTIGFFADRWCRNFLESVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQLPEGIEEWADGHR 282 (496)
T ss_dssp HHHTTSSEEEESSHHHHHHHHHHHHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CCCCTTHHHHHTTSE
T ss_pred HHHHhCCEEEEecHHHHHHHHHHHHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHHHHHHHHHHhCCce
Confidence 3347899999999988777644 22 21 13677899999998887443210 0 3568
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCC---ccHHHHHHHHHHHHhcC----CCCcEEEccC
Q 012436 271 AIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNK---SDEERLQSLKDKSIELK----VDGNVEFYKN 343 (464)
Q Consensus 271 ~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~---~~~~~~~~l~~~~~~~~----l~~~v~~~g~ 343 (464)
+|+++||+++.||++.+++|+ ++.++.++.. ++.|+++|..... +..++.+++++++.+.+ .. .|.|+|.
T Consensus 283 lIl~VgRLd~~KGi~~lL~Af-~ll~~~P~~~-~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~-~V~f~g~ 359 (496)
T 3t5t_A 283 LVVHSGRTDPIKNAERAVRAF-VLAARGGGLE-KTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSD-TVRIDND 359 (496)
T ss_dssp EEEEEEESSGGGCHHHHHHHH-HHHHHTSSCT-TEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTT-SEEEEEC
T ss_pred EEEEcccCccccCHHHHHHHH-HHHHhCcccc-eEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCc-CEEEeCC
Confidence 999999999999999999999 8888774222 4668888753321 22344556666665543 22 6999999
Q ss_pred CChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhC---CcEEEeCCCCCccceecccCCccceeecC--CHHHHHHHHH
Q 012436 344 LLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAG---AIPIAHNSAGPKMDIVLEEDGQQTGFLAQ--NAEEYADAIV 418 (464)
Q Consensus 344 ~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G---~PvI~~~~~~~~~~~v~~~~~~~~g~~~~--~~~~la~~i~ 418 (464)
++.+++..+|+.||++++||..||||++++|||||| .|+|+|..+|..+++ +.+|++++ |+++++++|.
T Consensus 360 v~~~el~aly~~ADv~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aGa~~~l------~~~allVnP~D~~~lA~AI~ 433 (496)
T 3t5t_A 360 NDVNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVNERDADVILSETCGAAEVL------GEYCRSVNPFDLVEQAEAIS 433 (496)
T ss_dssp CCHHHHHHHHHHCSEEEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBTTHHHH------GGGSEEECTTBHHHHHHHHH
T ss_pred CCHHHHHHHHHhccEEEECcccccCChhHHHHHHhCCCCCCEEEeCCCCCHHHh------CCCEEEECCCCHHHHHHHHH
Confidence 999999999999999999999999999999999996 899999988884443 24688886 9999999999
Q ss_pred HHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHh
Q 012436 419 KIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIRPILC 460 (464)
Q Consensus 419 ~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 460 (464)
++++|++++++++.++.++.+.+++....++.+++.+...-.
T Consensus 434 ~aL~m~~~er~~r~~~~~~~V~~~d~~~W~~~fl~~L~~~~~ 475 (496)
T 3t5t_A 434 AALAAGPRQRAEAAARRRDAARPWTLEAWVQAQLDGLAADHA 475 (496)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHTTCBHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHhhccc
Confidence 999977788999999999999999999999999998876643
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-26 Score=220.64 Aligned_cols=204 Identities=13% Similarity=0.079 Sum_probs=158.2
Q ss_pred HHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCC-CCCCCccCCCCCCCCCcEEEEEeccCCCCChHHHHHHHHH
Q 012436 215 YGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPC-DTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSV 293 (464)
Q Consensus 215 ~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~-d~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~ll~a~~~ 293 (464)
.+.+++.+|.++++|+..++.+.+. |.+ ++.+++|+. +.... + ...-+.+++++.|+ ..||.+.+++|++.
T Consensus 147 ~~~~~~~~d~ii~~S~~~~~~l~~~-g~~-ki~vi~n~~f~~~~~---~-~~~l~~~vi~~~~~--~~k~~~~ll~A~~~ 218 (374)
T 2xci_A 147 EKILSKKFDLIIMRTQEDVEKFKTF-GAK-RVFSCGNLKFICQKG---K-GIKLKGEFIVAGSI--HTGEVEIILKAFKE 218 (374)
T ss_dssp HHHHHTTCSEEEESCHHHHHHHHTT-TCC-SEEECCCGGGCCCCC---S-CCCCSSCEEEEEEE--CGGGHHHHHHHHHH
T ss_pred HHHHHHhCCEEEECCHHHHHHHHHc-CCC-eEEEcCCCccCCCcC---h-hhhhcCCEEEEEeC--CCchHHHHHHHHHH
Confidence 3566789999999999999999876 556 899999873 22111 1 11112256666664 46899999999999
Q ss_pred HHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCC--------CcEEEccCCChhHHHHHHhcCcEEEEcCC-
Q 012436 294 ALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVD--------GNVEFYKNLLYRDLVKLLGGAVVGIHSMI- 364 (464)
Q Consensus 294 l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~--------~~v~~~g~~~~~~~~~~l~~ad~~v~ps~- 364 (464)
+.++. |+++|+|+|+++++ .++++++++++|+. ++|.+.|.. +|+..+|+.||++++||.
T Consensus 219 l~~~~----p~~~lvivG~g~~~-----~~~l~~~~~~~gl~~~~~~~~~~~v~~~~~~--~dl~~~y~~aDv~vl~ss~ 287 (374)
T 2xci_A 219 IKKTY----SSLKLILVPRHIEN-----AKIFEKKARDFGFKTSFFENLEGDVILVDRF--GILKELYPVGKIAIVGGTF 287 (374)
T ss_dssp HHTTC----TTCEEEEEESSGGG-----HHHHHHHHHHTTCCEEETTCCCSSEEECCSS--SCHHHHGGGEEEEEECSSS
T ss_pred HHhhC----CCcEEEEECCCHHH-----HHHHHHHHHHCCCceEEecCCCCcEEEECCH--HHHHHHHHhCCEEEECCcc
Confidence 98765 68999999988643 24788888888876 468888877 899999999999888765
Q ss_pred CCCCChHHHHHHHhCCcEEEe-CCCCCccceecccCCc-cceee--cCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-
Q 012436 365 DEHFGISVVEYMAAGAIPIAH-NSAGPKMDIVLEEDGQ-QTGFL--AQNAEEYADAIVKIISMPETERLEMAAAARRRA- 439 (464)
Q Consensus 365 ~e~~~~~~~Ea~a~G~PvI~~-~~~~~~~~~v~~~~~~-~~g~~--~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~- 439 (464)
.|++|.+++||||||+|||++ +.++. .+++.+ . .+|++ ++|+++++++|.++++ | +.+++|++++++.+
T Consensus 288 ~e~gg~~~lEAmA~G~PVI~~~~~~~~-~e~~~~---~~~~G~l~~~~d~~~La~ai~~ll~-d-~~r~~mg~~ar~~~~ 361 (374)
T 2xci_A 288 VNIGGHNLLEPTCWGIPVIYGPYTHKV-NDLKEF---LEKEGAGFEVKNETELVTKLTELLS-V-KKEIKVEEKSREIKG 361 (374)
T ss_dssp SSSCCCCCHHHHTTTCCEEECSCCTTS-HHHHHH---HHHTTCEEECCSHHHHHHHHHHHHH-S-CCCCCHHHHHHHHHH
T ss_pred cCCCCcCHHHHHHhCCCEEECCCccCh-HHHHHH---HHHCCCEEEeCCHHHHHHHHHHHHh-H-HHHHHHHHHHHHHHH
Confidence 467899999999999999986 56666 676643 2 34544 4599999999999999 9 99999999999988
Q ss_pred HccC
Q 012436 440 ARFS 443 (464)
Q Consensus 440 ~~~s 443 (464)
++++
T Consensus 362 ~~~g 365 (374)
T 2xci_A 362 CYLE 365 (374)
T ss_dssp HHHH
T ss_pred hccc
Confidence 4443
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.95 E-value=2e-26 Score=200.95 Aligned_cols=179 Identities=24% Similarity=0.291 Sum_probs=152.5
Q ss_pred ecCCCCCCCCc--cCCC-----C-------CCCCCcEEEEEeccC-CCCChHHHHHHHHHHH--HHhcCCCCCcEEEEEc
Q 012436 249 VYPPCDTSGLQ--VLPL-----E-------RSTEYPAIISVAQFR-PEKAHPLQLEAFSVAL--RKLDADLPRPRLQFVG 311 (464)
Q Consensus 249 i~~~~d~~~~~--~~~~-----~-------~~~~~~~i~~~G~~~-~~K~~~~ll~a~~~l~--~~~~~~~p~~~l~i~G 311 (464)
||||+|.+.|. +... . ..++.++++|+|++. +.||++.+++++..+. ++. |+++|+++|
T Consensus 2 ipngvd~~~f~~~~~~~~~~~~~~~~r~~~~~~~~~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~----~~~~l~i~G 77 (200)
T 2bfw_A 2 SHNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEF----QEMRFIIIG 77 (200)
T ss_dssp ---CCCTTTSSGGGSCSCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGG----GGEEEEEEC
T ss_pred CCCccChhhccccccccchhhHHHHHHHHcCCCCCCEEEEeeccccccCCHHHHHHHHHHHHhhccC----CCeEEEEEC
Confidence 69999999887 4331 0 012456999999999 9999999999999996 555 589999999
Q ss_pred CCCCCccHHHHHHHHHHHHhcCCCCcEEE-ccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCC
Q 012436 312 SCRNKSDEERLQSLKDKSIELKVDGNVEF-YKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGP 390 (464)
Q Consensus 312 ~~~~~~~~~~~~~l~~~~~~~~l~~~v~~-~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~ 390 (464)
.++. ++.+++++.+++++ +|++ +|+++++++.++|+.||++++||..|++|++++|||++|+|||+++.++.
T Consensus 78 ~~~~----~~~~~l~~~~~~~~---~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~ 150 (200)
T 2bfw_A 78 KGDP----ELEGWARSLEEKHG---NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGL 150 (200)
T ss_dssp CBCH----HHHHHHHHHHHHCT---TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEEEESCHHH
T ss_pred CCCh----HHHHHHHHHHHhcC---CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCCCCEEEeCCCCh
Confidence 8751 24578888888876 8999 99999999999999999999999999999999999999999999999887
Q ss_pred ccceecccCCccceeecC--CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHccC
Q 012436 391 KMDIVLEEDGQQTGFLAQ--NAEEYADAIVKIISMPETERLEMAAAARRRAARFS 443 (464)
Q Consensus 391 ~~~~v~~~~~~~~g~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s 443 (464)
.+++ + +.+|++++ |+++++++|.+++++|++.++++++++++.+++||
T Consensus 151 -~e~~-~---~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~~~fs 200 (200)
T 2bfw_A 151 -RDII-T---NETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFS 200 (200)
T ss_dssp -HHHC-C---TTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTC
T ss_pred -HHHc-C---CCceEEecCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcC
Confidence 6777 7 78999886 99999999999998899999999999999983375
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.94 E-value=3.3e-26 Score=219.94 Aligned_cols=275 Identities=13% Similarity=0.020 Sum_probs=190.1
Q ss_pred hHHHHHHhhhcCCcEEEecccccccch---hhhccCceEEEEeeCCcchhhhhhcccccccccCCCcccccchhhhHHHH
Q 012436 129 VYLSWEALCKFTPLYYFDTSGYAFTYP---LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKI 205 (464)
Q Consensus 129 ~~~~~~~l~~~~~Dvv~~~~~~~~~~~---~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (464)
...+.+.+++.+||+||.+......++ .++..++|++. .|..... +. .| ..+.. .
T Consensus 80 ~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~-~~~~~~~-------~~---~~--------~~~~~---~ 137 (376)
T 1v4v_A 80 LPQAARALKEMGADYVLVHGDTLTTFAVAWAAFLEGIPVGH-VEAGLRS-------GN---LK--------EPFPE---E 137 (376)
T ss_dssp HHHHHHHHHHTTCSEEEEESSCHHHHHHHHHHHHTTCCEEE-ETCCCCC-------SC---TT--------SSTTH---H
T ss_pred HHHHHHHHHHcCCCEEEEeCChHHHHHHHHHHHHhCCCEEE-EeCCCcc-------cc---cc--------CCCch---H
Confidence 345667788899999997654322222 45678999864 4422110 00 00 00000 0
Q ss_pred HHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCC-CCCeEEecCCC-CCCCCc----cCCCCCCCCCcEEEEEeccC
Q 012436 206 VYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPC-DTSGLQ----VLPLERSTEYPAIISVAQFR 279 (464)
Q Consensus 206 ~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~-~~~i~~i~~~~-d~~~~~----~~~~~~~~~~~~i~~~G~~~ 279 (464)
...+.+.+.+|.++++|+..++.+.+. |. ++++.+++|+. |...+. .......+++++++++||+.
T Consensus 138 -------~~~~~~~~~~~~~~~~s~~~~~~l~~~-g~~~~ki~vi~n~~~d~~~~~~~~~~~~~~~~~~~~vl~~~gr~~ 209 (376)
T 1v4v_A 138 -------ANRRLTDVLTDLDFAPTPLAKANLLKE-GKREEGILVTGQTGVDAVLLAAKLGRLPEGLPEGPYVTVTMHRRE 209 (376)
T ss_dssp -------HHHHHHHHHCSEEEESSHHHHHHHHTT-TCCGGGEEECCCHHHHHHHHHHHHCCCCTTCCSSCEEEECCCCGG
T ss_pred -------HHHHHHHHHhceeeCCCHHHHHHHHHc-CCCcceEEEECCchHHHHhhhhhhhHHHHhcCCCCEEEEEeCccc
Confidence 112333467999999999999999875 54 56788999874 321110 00011123445677899988
Q ss_pred CCCChHHHHHHHHHHHHHhcCCCCCcEEEEE-cCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHHHhcCcE
Q 012436 280 PEKAHPLQLEAFSVALRKLDADLPRPRLQFV-GSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVV 358 (464)
Q Consensus 280 ~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~-G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~ 358 (464)
..||++.+++|++.+.++. |++++++. |.++ ...+.+++.++. .++|.|.|+++..++.++|+.||+
T Consensus 210 ~~k~~~~ll~a~~~l~~~~----~~~~lv~~~g~~~-----~~~~~l~~~~~~---~~~v~~~g~~g~~~~~~~~~~ad~ 277 (376)
T 1v4v_A 210 NWPLLSDLAQALKRVAEAF----PHLTFVYPVHLNP-----VVREAVFPVLKG---VRNFVLLDPLEYGSMAALMRASLL 277 (376)
T ss_dssp GGGGHHHHHHHHHHHHHHC----TTSEEEEECCSCH-----HHHHHHHHHHTT---CTTEEEECCCCHHHHHHHHHTEEE
T ss_pred chHHHHHHHHHHHHHHhhC----CCeEEEEECCCCH-----HHHHHHHHHhcc---CCCEEEECCCCHHHHHHHHHhCcE
Confidence 8889999999999997765 58888886 6442 233556655432 358999999988899999999999
Q ss_pred EEEcCCCCCCChHHHHHHHhCCcEEEeC-CCCCccceecccCCccceeecC-CHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 012436 359 GIHSMIDEHFGISVVEYMAAGAIPIAHN-SAGPKMDIVLEEDGQQTGFLAQ-NAEEYADAIVKIISMPETERLEMAAAAR 436 (464)
Q Consensus 359 ~v~ps~~e~~~~~~~Ea~a~G~PvI~~~-~~~~~~~~v~~~~~~~~g~~~~-~~~~la~~i~~l~~~~~~~~~~~~~~~~ 436 (464)
+|.|| + |+ ++|||++|+|||+++ .++. .+++.. ++|++++ |+++++++|.++++ |++.+++|++++
T Consensus 278 ~v~~S--~--g~-~lEA~a~G~PvI~~~~~~~~-~~~~~~----g~g~lv~~d~~~la~~i~~ll~-d~~~~~~~~~~~- 345 (376)
T 1v4v_A 278 LVTDS--G--GL-QEEGAALGVPVVVLRNVTER-PEGLKA----GILKLAGTDPEGVYRVVKGLLE-NPEELSRMRKAK- 345 (376)
T ss_dssp EEESC--H--HH-HHHHHHTTCCEEECSSSCSC-HHHHHH----TSEEECCSCHHHHHHHHHHHHT-CHHHHHHHHHSC-
T ss_pred EEECC--c--CH-HHHHHHcCCCEEeccCCCcc-hhhhcC----CceEECCCCHHHHHHHHHHHHh-ChHhhhhhcccC-
Confidence 99998 2 33 789999999999984 5666 676654 5899884 99999999999999 999998888633
Q ss_pred HHHHccCHHHHHHHHHHHHHHHHh
Q 012436 437 RRAARFSEQRFYEDFKAAIRPILC 460 (464)
Q Consensus 437 ~~~~~~s~~~~~~~~~~~~~~~~~ 460 (464)
+.|++...++++.+.+.+++.
T Consensus 346 ---~~~~~~~~~~~i~~~i~~~~~ 366 (376)
T 1v4v_A 346 ---NPYGDGKAGLMVARGVAWRLG 366 (376)
T ss_dssp ---CSSCCSCHHHHHHHHHHHHTT
T ss_pred ---CCCCCChHHHHHHHHHHHHhc
Confidence 456666677777777777654
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.93 E-value=2e-25 Score=190.46 Aligned_cols=151 Identities=26% Similarity=0.318 Sum_probs=132.3
Q ss_pred CCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHH--hcCCCCcEEEccC
Q 012436 266 STEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSI--ELKVDGNVEFYKN 343 (464)
Q Consensus 266 ~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~--~~~l~~~v~~~g~ 343 (464)
+.++++|+|+|++.+.||++.++++++.+ |+++|+++|.++.. +++++.++ ++++.++|.+.|+
T Consensus 20 ~~~~~~i~~~G~~~~~Kg~~~li~a~~~l--------~~~~l~i~G~~~~~------~~l~~~~~~~~~~l~~~v~~~g~ 85 (177)
T 2f9f_A 20 KCYGDFWLSVNRIYPEKRIELQLEVFKKL--------QDEKLYIVGWFSKG------DHAERYARKIMKIAPDNVKFLGS 85 (177)
T ss_dssp CCCCSCEEEECCSSGGGTHHHHHHHHHHC--------TTSCEEEEBCCCTT------STHHHHHHHHHHHSCTTEEEEES
T ss_pred CCCCCEEEEEeccccccCHHHHHHHHHhC--------CCcEEEEEecCccH------HHHHHHHHhhhcccCCcEEEeCC
Confidence 35668899999999999999999999987 48999999998764 46777777 7788889999999
Q ss_pred CChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeec-CCHHHHHHHHHHHHc
Q 012436 344 LLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLA-QNAEEYADAIVKIIS 422 (464)
Q Consensus 344 ~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~-~~~~~la~~i~~l~~ 422 (464)
++++++.++|+.||++++||..|++|++++|||++|+|||+++.++. .+++.+ +.+|+++ +|+++++++|.++++
T Consensus 86 ~~~~e~~~~~~~adi~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~-~e~i~~---~~~g~~~~~d~~~l~~~i~~l~~ 161 (177)
T 2f9f_A 86 VSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGF-KETVIN---EKTGYLVNADVNEIIDAMKKVSK 161 (177)
T ss_dssp CCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTTCCEEEESSHHH-HHHCCB---TTTEEEECSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCCEEEeCCCcCCCChHHHHHHHcCCcEEEeCCCCH-HHHhcC---CCccEEeCCCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999887 788888 7899876 599999999999999
Q ss_pred CCHHH-HHHHHHHH
Q 012436 423 MPETE-RLEMAAAA 435 (464)
Q Consensus 423 ~~~~~-~~~~~~~~ 435 (464)
|++. ++++++++
T Consensus 162 -~~~~~~~~~~~~a 174 (177)
T 2f9f_A 162 -NPDKFKKDCFRRA 174 (177)
T ss_dssp -CTTTTHHHHHHHH
T ss_pred -CHHHHHHHHHHHH
Confidence 8875 34443333
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.9e-22 Score=188.25 Aligned_cols=196 Identities=13% Similarity=0.037 Sum_probs=150.5
Q ss_pred HHHHHhhcCCEEEEcCHHHHHHHHHHhCCC-CCeEEecCCCCCCCCccCCCCCCCCCcEEEEEeccCCCCChHHHHHHHH
Q 012436 214 MYGLVGSCADLAMVNSSWTQSHIEKLWGIP-DRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFS 292 (464)
Q Consensus 214 ~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~-~~i~~i~~~~d~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~ll~a~~ 292 (464)
.|+.+++.||.|+++|+.+++.+.+. |.+ .++.++++. |... ..+.....+++.++|+|++.....++.
T Consensus 126 ~E~~~y~~aD~Ii~~S~~~~~~l~~~-G~~~~ki~~~~~~-~~~~--~~~~~~~~~~~~i~yaG~l~k~~~L~~------ 195 (339)
T 3rhz_A 126 RTIAYYNKADVVVAPSQKMIDKLRDF-GMNVSKTVVQGMW-DHPT--QAPMFPAGLKREIHFPGNPERFSFVKE------ 195 (339)
T ss_dssp HHHHHHTTCSEEEESCHHHHHHHHHT-TCCCSEEEECCSC-CCCC--CCCCCCCEEEEEEEECSCTTTCGGGGG------
T ss_pred HHHHHHHHCCEEEECCHHHHHHHHHc-CCCcCceeecCCC-CccC--cccccccCCCcEEEEeCCcchhhHHHh------
Confidence 57888999999999999999999886 543 566444332 2211 111122234578999999985332221
Q ss_pred HHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHHHhcCcEEEEcCCC-------
Q 012436 293 VALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMID------- 365 (464)
Q Consensus 293 ~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~------- 365 (464)
+ . |+++|+++|+|++. .++ ||+|+|++|.+|+.++++++|+.++....
T Consensus 196 -l---~----~~~~f~ivG~G~~~----------------~l~-nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~ 250 (339)
T 3rhz_A 196 -W---K----YDIPLKVYTWQNVE----------------LPQ-NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQS 250 (339)
T ss_dssp -C---C----CSSCEEEEESCCCC----------------CCT-TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHT
T ss_pred -C---C----CCCeEEEEeCCccc----------------CcC-CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHH
Confidence 1 1 58999999999752 134 99999999999999999999988775211
Q ss_pred CCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHccCHH
Q 012436 366 EHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQNAEEYADAIVKIISMPETERLEMAAAARRRAARFSEQ 445 (464)
Q Consensus 366 e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~ 445 (464)
...|.+++||||+|+|||+++.++. .+++.+ +++|+.+++.++++++|..+ +++++++|++++++.+++++++
T Consensus 251 ~~~P~Kl~eymA~G~PVI~~~~~~~-~~~v~~---~~~G~~~~~~~e~~~~i~~l---~~~~~~~m~~na~~~a~~~~~~ 323 (339)
T 3rhz_A 251 LYCSYKLGSFLAAGIPVIVQEGIAN-QELIEN---NGLGWIVKDVEEAIMKVKNV---NEDEYIELVKNVRSFNPILRKG 323 (339)
T ss_dssp TCCCHHHHHHHHHTCCEEEETTCTT-THHHHH---HTCEEEESSHHHHHHHHHHC---CHHHHHHHHHHHHHHTHHHHTT
T ss_pred hcChHHHHHHHHcCCCEEEccChhH-HHHHHh---CCeEEEeCCHHHHHHHHHHh---CHHHHHHHHHHHHHHHHHhhcc
Confidence 2568999999999999999998887 789998 89999999999999999875 6678999999999887777777
Q ss_pred HHHHHH
Q 012436 446 RFYEDF 451 (464)
Q Consensus 446 ~~~~~~ 451 (464)
.+.++.
T Consensus 324 ~f~k~~ 329 (339)
T 3rhz_A 324 FFTRRL 329 (339)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776553
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=6.7e-22 Score=192.29 Aligned_cols=355 Identities=12% Similarity=0.010 Sum_probs=214.5
Q ss_pred ccccccceEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeecc
Q 012436 29 ARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRR 108 (464)
Q Consensus 29 ~~~~~~mkI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (464)
.++.++|||+++... ++|....+..++++|.++| ++|.++++.. ..+ .....|+ +++.++..
T Consensus 15 ~~~~~~MrIl~~~~~---~~Gh~~~~~~la~~L~~~G--heV~v~~~~~------~~~-~~~~~g~------~~~~~~~~ 76 (412)
T 3otg_A 15 HIEGRHMRVLFASLG---THGHTYPLLPLATAARAAG--HEVTFATGEG------FAG-TLRKLGF------EPVATGMP 76 (412)
T ss_dssp ---CCSCEEEEECCS---SHHHHGGGHHHHHHHHHTT--CEEEEEECGG------GHH-HHHHTTC------EEEECCCC
T ss_pred CcccceeEEEEEcCC---CcccHHHHHHHHHHHHHCC--CEEEEEccHH------HHH-HHHhcCC------ceeecCcc
Confidence 455678999998743 3577888889999999999 5666666431 111 1112233 33333210
Q ss_pred ---cc-------ccccc------Ccceehhhhchh------hhHHHHHHhhhcCCcEEEecccccccchhhhccCceEEE
Q 012436 109 ---KW-------IEEST------YPRFTMIGQSFG------SVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVIC 166 (464)
Q Consensus 109 ---~~-------~~~~~------~~~~~~~~~~~~------~~~~~~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~p~v~ 166 (464)
.+ ..... ..........+. ....+.+.+++.+||+|+.+........+++..++|+|.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDvVv~~~~~~~~~~aa~~~giP~v~ 156 (412)
T 3otg_A 77 VFDGFLAALRIRFDTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERLRPDLVVQEISNYGAGLAALKAGIPTIC 156 (412)
T ss_dssp HHHHHHHHHHHHHSCSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHTCCEEE
T ss_pred cccchhhhhhhhhcccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhcCCCEEEECchhhHHHHHHHHcCCCEEE
Confidence 00 00000 000000111111 125566778889999998664333222366789999999
Q ss_pred EeeCCcchhhhhhcccccccccCCCcccccchhhhHHHHHHHHHHHHHHHHH--------hhcCCEEEEcCHHHHHHHHH
Q 012436 167 YTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLV--------GSCADLAMVNSSWTQSHIEK 238 (464)
Q Consensus 167 ~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~ad~vi~~S~~~~~~~~~ 238 (464)
+.|.+... ............+ +..+.. ...+|.+++.++...+...+
T Consensus 157 ~~~~~~~~----------------------~~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~d~~i~~~~~~~~~~~~ 211 (412)
T 3otg_A 157 HGVGRDTP----------------------DDLTRSIEEEVRG---LAQRLGLDLPPGRIDGFGNPFIDIFPPSLQEPEF 211 (412)
T ss_dssp ECCSCCCC----------------------SHHHHHHHHHHHH---HHHHTTCCCCSSCCGGGGCCEEECSCGGGSCHHH
T ss_pred ecccccCc----------------------hhhhHHHHHHHHH---HHHHcCCCCCcccccCCCCeEEeeCCHHhcCCcc
Confidence 88843210 0011111111111 111211 24678899999887776655
Q ss_pred HhCCCCCeEEecCCCCCC-CCccC-CCCCCCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCC-
Q 012436 239 LWGIPDRIKRVYPPCDTS-GLQVL-PLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRN- 315 (464)
Q Consensus 239 ~~~~~~~i~~i~~~~d~~-~~~~~-~~~~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~- 315 (464)
.... ....+.+.+.+.. ..... .....+++.++++.|+.. .++.+.+.++++.+.+. +.++++++++..
T Consensus 212 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlv~~G~~~-~~~~~~~~~~~~~l~~~------~~~~~~~~g~~~~ 283 (412)
T 3otg_A 212 RARP-RRHELRPVPFAEQGDLPAWLSSRDTARPLVYLTLGTSS-GGTVEVLRAAIDGLAGL------DADVLVASGPSLD 283 (412)
T ss_dssp HTCT-TEEECCCCCCCCCCCCCGGGGGSCTTSCEEEEECTTTT-CSCHHHHHHHHHHHHTS------SSEEEEECCSSCC
T ss_pred cCCC-CcceeeccCCCCCCCCCCccccccCCCCEEEEEcCCCC-cCcHHHHHHHHHHHHcC------CCEEEEEECCCCC
Confidence 4322 1111122222211 11111 011234446778888875 67777777777776543 667777766543
Q ss_pred CccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCC---cc
Q 012436 316 KSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGP---KM 392 (464)
Q Consensus 316 ~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~---~~ 392 (464)
. +.++ +++++|.+.|++ ++.++|+.||++|.++ .+.+++|||++|+|+|+.+.++. ..
T Consensus 284 ~------~~l~------~~~~~v~~~~~~---~~~~~l~~ad~~v~~~----g~~t~~Ea~a~G~P~v~~p~~~~q~~~~ 344 (412)
T 3otg_A 284 V------SGLG------EVPANVRLESWV---PQAALLPHVDLVVHHG----GSGTTLGALGAGVPQLSFPWAGDSFANA 344 (412)
T ss_dssp C------TTCC------CCCTTEEEESCC---CHHHHGGGCSEEEESC----CHHHHHHHHHHTCCEEECCCSTTHHHHH
T ss_pred h------hhhc------cCCCcEEEeCCC---CHHHHHhcCcEEEECC----chHHHHHHHHhCCCEEecCCchhHHHHH
Confidence 2 1222 236799999999 4889999999999764 24789999999999999876542 13
Q ss_pred ceecccCCccceeecC----CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Q 012436 393 DIVLEEDGQQTGFLAQ----NAEEYADAIVKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIRP 457 (464)
Q Consensus 393 ~~v~~~~~~~~g~~~~----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 457 (464)
+.+.+ .++|++++ |+++++++|.++++ |++.++++++.+++..+.++++.+++.+.+++.+
T Consensus 345 ~~v~~---~g~g~~~~~~~~~~~~l~~ai~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 409 (412)
T 3otg_A 345 QAVAQ---AGAGDHLLPDNISPDSVSGAAKRLLA-EESYRAGARAVAAEIAAMPGPDEVVRLLPGFASR 409 (412)
T ss_dssp HHHHH---HTSEEECCGGGCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHSCCHHHHHTTHHHHHC-
T ss_pred HHHHH---cCCEEecCcccCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhcc
Confidence 45555 67888775 89999999999999 9999999999999888889999999999888754
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.90 E-value=8.7e-22 Score=187.49 Aligned_cols=340 Identities=12% Similarity=0.081 Sum_probs=203.6
Q ss_pred ceEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeecccccccc
Q 012436 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (464)
Q Consensus 35 mkI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (464)
.||++.... .||.-.-+..++++|.++| ++|..++... ..........++ ++..++...+....
T Consensus 3 ~~i~i~~GG---TgGHi~palala~~L~~~g--~~V~~vg~~~-----g~e~~~v~~~g~------~~~~i~~~~~~~~~ 66 (365)
T 3s2u_A 3 GNVLIMAGG---TGGHVFPALACAREFQARG--YAVHWLGTPR-----GIENDLVPKAGL------PLHLIQVSGLRGKG 66 (365)
T ss_dssp CEEEEECCS---SHHHHHHHHHHHHHHHHTT--CEEEEEECSS-----STHHHHTGGGTC------CEEECC--------
T ss_pred CcEEEEcCC---CHHHHHHHHHHHHHHHhCC--CEEEEEECCc-----hHhhchhhhcCC------cEEEEECCCcCCCC
Confidence 578775321 1355555788999999999 5555555432 111122222233 23333322221111
Q ss_pred cCcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccch--hhhccCceEEEEeeCCcchhhhhhcccccccccCCCc
Q 012436 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (464)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~--~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~ 192 (464)
.+..+...+..+...+.+.+++++.+||+|+.+.++..... .++..++|++++-.+..
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~l~~~~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~n~~-------------------- 126 (365)
T 3s2u_A 67 LKSLVKAPLELLKSLFQALRVIRQLRPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQNAV-------------------- 126 (365)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHCCSEEEECSSSTHHHHHHHHHHTTCCEEEEECSSS--------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCcchHHHHHHHHHcCCCEEEEecchh--------------------
Confidence 22223333444566677888899999999998777654422 56689999987322110
Q ss_pred ccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCCC--CCCCCCc
Q 012436 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL--ERSTEYP 270 (464)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~~--~~~~~~~ 270 (464)
... ..+...+.++.+.+..+.. +....++.++.+++..+.+..... ...++++
T Consensus 127 -------~G~-----------~nr~l~~~a~~v~~~~~~~-------~~~~~k~~~~g~pvr~~~~~~~~~~~~~~~~~~ 181 (365)
T 3s2u_A 127 -------AGT-----------ANRSLAPIARRVCEAFPDT-------FPASDKRLTTGNPVRGELFLDAHARAPLTGRRV 181 (365)
T ss_dssp -------CCH-----------HHHHHGGGCSEEEESSTTS-------SCC---CEECCCCCCGGGCCCTTSSCCCTTSCC
T ss_pred -------hhh-----------HHHhhccccceeeeccccc-------ccCcCcEEEECCCCchhhccchhhhcccCCCCc
Confidence 000 1234457889988766532 233567778888887655442221 1223344
Q ss_pred E-EEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHH
Q 012436 271 A-IISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDL 349 (464)
Q Consensus 271 ~-i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~ 349 (464)
. +++.|+....+..+.+.+++..+.... ++.+++.++..+ .+.+.+..++.+ .++.+.+++ +++
T Consensus 182 ~ilv~gGs~g~~~~~~~~~~al~~l~~~~-----~~~vi~~~G~~~------~~~~~~~~~~~~--~~~~v~~f~--~dm 246 (365)
T 3s2u_A 182 NLLVLGGSLGAEPLNKLLPEALAQVPLEI-----RPAIRHQAGRQH------AEITAERYRTVA--VEADVAPFI--SDM 246 (365)
T ss_dssp EEEECCTTTTCSHHHHHHHHHHHTSCTTT-----CCEEEEECCTTT------HHHHHHHHHHTT--CCCEEESCC--SCH
T ss_pred EEEEECCcCCccccchhhHHHHHhccccc-----ceEEEEecCccc------cccccceecccc--cccccccch--hhh
Confidence 4 455566677777777788887765442 455554433221 245555555554 468889999 899
Q ss_pred HHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCcc-------ceecccCCccceeecC----CHHHHHHHHH
Q 012436 350 VKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKM-------DIVLEEDGQQTGFLAQ----NAEEYADAIV 418 (464)
Q Consensus 350 ~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~-------~~v~~~~~~~~g~~~~----~~~~la~~i~ 418 (464)
.++|+.||++|.-+ .+.++.|++++|+|+|..+.+.... +.+.+ .+.|++++ ++++++++|.
T Consensus 247 ~~~l~~aDlvI~ra----G~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~---~G~a~~l~~~~~~~~~L~~~i~ 319 (365)
T 3s2u_A 247 AAAYAWADLVICRA----GALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVR---SGAGRLLPQKSTGAAELAAQLS 319 (365)
T ss_dssp HHHHHHCSEEEECC----CHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHT---TTSEEECCTTTCCHHHHHHHHH
T ss_pred hhhhccceEEEecC----CcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHH---CCCEEEeecCCCCHHHHHHHHH
Confidence 99999999999643 3688999999999999877553211 12333 46676664 6899999999
Q ss_pred HHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Q 012436 419 KIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIRPI 458 (464)
Q Consensus 419 ~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 458 (464)
++++ |++.+++|++++++.......+.+++.++++.+.+
T Consensus 320 ~ll~-d~~~~~~m~~~a~~~~~~~aa~~ia~~i~~larG~ 358 (365)
T 3s2u_A 320 EVLM-HPETLRSMADQARSLAKPEATRTVVDACLEVARGL 358 (365)
T ss_dssp HHHH-CTHHHHHHHHHHHHTCCTTHHHHHHHHHHHHC---
T ss_pred HHHC-CHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHccc
Confidence 9999 99999999999988765566666776666665543
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.88 E-value=1e-21 Score=189.14 Aligned_cols=356 Identities=13% Similarity=0.045 Sum_probs=212.5
Q ss_pred cccccceEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEE-EcccCCCCchhHHHHHHhhcCcccCCCceeeeeecc
Q 012436 30 RRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIV-YTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRR 108 (464)
Q Consensus 30 ~~~~~mkI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (464)
+.+++|||+++...-+ +.-. +..++++|.+.+.++++.+ .|+... +..+...+.+++... +.+...
T Consensus 23 ~~m~~~kI~~v~Gtr~---~~~~-~a~li~~l~~~~~~~~~~~~~tG~h~----~m~~~~~~~~~i~~~-----~~l~v~ 89 (403)
T 3ot5_A 23 NAMAKIKVMSIFGTRP---EAIK-MAPLVLALEKEPETFESTVVITAQHR----EMLDQVLEIFDIKPD-----IDLDIM 89 (403)
T ss_dssp ---CCEEEEEEECSHH---HHHH-HHHHHHHHHTCTTTEEEEEEECC---------CHHHHHHTTCCCS-----EECCCC
T ss_pred hccccceEEEEEecCh---hHHH-HHHHHHHHHhCCCCCcEEEEEecCcH----HHHHHHHHhcCCCCC-----cccccC
Confidence 3345689999876543 2333 3578899988631366554 444321 122222344555211 111110
Q ss_pred cccccccCcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccch---hhhccCceEEEEeeCCcchhhhhhcccccc
Q 012436 109 KWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP---LARIFGCRVICYTHYPTISLDMISRVREGS 185 (464)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~---~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~ 185 (464)
. .. ..........+..+.+.+++.+||+|+.+......++ .++..++|++ +.+.+..+.+.
T Consensus 90 ~----~~---~~~~~~~~~~~~~l~~~l~~~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~-h~~aglrs~~~-------- 153 (403)
T 3ot5_A 90 K----KG---QTLAEITSRVMNGINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKMLG-HVEAGLRTWNK-------- 153 (403)
T ss_dssp C-----C---CCHHHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCEEE-EESCCCCCSCT--------
T ss_pred C----CC---CCHHHHHHHHHHHHHHHHHHcCCCEEEEECCchhHHHHHHHHHHhCCCEE-EEECCcccccc--------
Confidence 0 00 0111112344566777889999999997655333332 5568899975 33322110000
Q ss_pred cccCCCcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCC-CCCCCccCCC-
Q 012436 186 SMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPC-DTSGLQVLPL- 263 (464)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~-d~~~~~~~~~- 263 (464)
| ..+.. ... ...+.+.+|.+++.|+..++.+.+.+-.++++.++.|+. |...+.....
T Consensus 154 --~--------~~~p~---~~~-------r~~~~~~a~~~~~~se~~~~~l~~~Gi~~~~i~vvGn~~~D~~~~~~~~~~ 213 (403)
T 3ot5_A 154 --Y--------SPFPE---EMN-------RQLTGVMADIHFSPTKQAKENLLAEGKDPATIFVTGNTAIDALKTTVQKDY 213 (403)
T ss_dssp --T--------SSTTH---HHH-------HHHHHHHCSEEEESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHSCTTC
T ss_pred --c--------cCCcH---HHH-------HHHHHHhcCEEECCCHHHHHHHHHcCCCcccEEEeCCchHHHHHhhhhhhc
Confidence 0 00000 011 122336689999999999999988743367899998853 3211110000
Q ss_pred C------CCCCCcEEEEEeccCC-CCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCC
Q 012436 264 E------RSTEYPAIISVAQFRP-EKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDG 336 (464)
Q Consensus 264 ~------~~~~~~~i~~~G~~~~-~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~ 336 (464)
. ..+++..+++.||... .|+++.+++|+..+.++. |++++++.+... ....+.+++. ++..+
T Consensus 214 ~~~~~~~l~~~~~vlv~~~r~~~~~~~l~~ll~a~~~l~~~~----~~~~~v~~~~~~----~~~~~~l~~~---~~~~~ 282 (403)
T 3ot5_A 214 HHPILENLGDNRLILMTAHRRENLGEPMQGMFEAVREIVESR----EDTELVYPMHLN----PAVREKAMAI---LGGHE 282 (403)
T ss_dssp CCHHHHSCTTCEEEEECCCCHHHHTTHHHHHHHHHHHHHHHC----TTEEEEEECCSC----HHHHHHHHHH---HTTCT
T ss_pred chHHHHhccCCCEEEEEeCcccccCcHHHHHHHHHHHHHHhC----CCceEEEecCCC----HHHHHHHHHH---hCCCC
Confidence 0 0223344555665433 367899999999998776 688888874321 1222333332 33346
Q ss_pred cEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEe-CCCCCccceecccCCccceeecC-CHHHHH
Q 012436 337 NVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAH-NSAGPKMDIVLEEDGQQTGFLAQ-NAEEYA 414 (464)
Q Consensus 337 ~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~-~~~~~~~~~v~~~~~~~~g~~~~-~~~~la 414 (464)
+|.+.|++++.++..+|+.||+++.+| |...+||+++|+|+|++ +.++. .+.+.. ++|++++ |+++++
T Consensus 283 ~v~l~~~l~~~~~~~l~~~ad~vv~~S-----Gg~~~EA~a~g~PvV~~~~~~~~-~e~v~~----g~~~lv~~d~~~l~ 352 (403)
T 3ot5_A 283 RIHLIEPLDAIDFHNFLRKSYLVFTDS-----GGVQEEAPGMGVPVLVLRDTTER-PEGIEA----GTLKLIGTNKENLI 352 (403)
T ss_dssp TEEEECCCCHHHHHHHHHHEEEEEECC-----HHHHHHGGGTTCCEEECCSSCSC-HHHHHH----TSEEECCSCHHHHH
T ss_pred CEEEeCCCCHHHHHHHHHhcCEEEECC-----ccHHHHHHHhCCCEEEecCCCcc-hhheeC----CcEEEcCCCHHHHH
Confidence 899999999899999999999999886 33348999999999999 55554 677655 5888887 999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHh
Q 012436 415 DAIVKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIRPILC 460 (464)
Q Consensus 415 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 460 (464)
+++.++++ |++.+++|++++.. |.....++++.+.+.+.+.
T Consensus 353 ~ai~~ll~-~~~~~~~m~~~~~~----~g~~~aa~rI~~~l~~~l~ 393 (403)
T 3ot5_A 353 KEALDLLD-NKESHDKMAQAANP----YGDGFAANRILAAIKSHFE 393 (403)
T ss_dssp HHHHHHHH-CHHHHHHHHHSCCT----TCCSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHc-CHHHHHHHHhhcCc----ccCCcHHHHHHHHHHHHhC
Confidence 99999999 99999888765443 4444445555555555443
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.1e-21 Score=188.79 Aligned_cols=345 Identities=13% Similarity=0.091 Sum_probs=212.1
Q ss_pred ccceEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceE-EEcccCCCCchhHHHHHHhhcCcccCCCceeeeeeccccc
Q 012436 33 RTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCI-VYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWI 111 (464)
Q Consensus 33 ~~mkI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (464)
++|||+++...-+ |.- -+..++++|.+.. ++++. +.|+.. .+..+...+.+++... +.+....
T Consensus 24 ~m~ki~~v~Gtr~---~~~-~~a~li~~l~~~~-~~~~~~~~tG~h----~~~~~~~~~~~~i~~~-----~~l~~~~-- 87 (396)
T 3dzc_A 24 AMKKVLIVFGTRP---EAI-KMAPLVQQLCQDN-RFVAKVCVTGQH----REMLDQVLELFSITPD-----FDLNIME-- 87 (396)
T ss_dssp CCEEEEEEECSHH---HHH-HHHHHHHHHHHCT-TEEEEEEECCSS----SHHHHHHHHHTTCCCS-----EECCCCC--
T ss_pred CCCeEEEEEeccH---hHH-HHHHHHHHHHhCC-CCcEEEEEeccc----HHHHHHHHHhcCCCCc-----eeeecCC--
Confidence 3589999876553 233 3357888998862 36664 444432 1233333345555211 1111100
Q ss_pred ccccCcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccch---hhhccCceEEEEeeCCcchhhhhhccccccccc
Q 012436 112 EESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP---LARIFGCRVICYTHYPTISLDMISRVREGSSMY 188 (464)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~---~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~ 188 (464)
............+..+.+.+++.+||+|+.+......++ .++..++|++. .+.+..+.+. |
T Consensus 88 -----~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h-~~ag~rs~~~----------~ 151 (396)
T 3dzc_A 88 -----PGQTLNGVTSKILLGMQQVLSSEQPDVVLVHGDTATTFAASLAAYYQQIPVGH-VEAGLRTGNI----------Y 151 (396)
T ss_dssp -----TTCCHHHHHHHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHTTTCCEEE-ETCCCCCSCT----------T
T ss_pred -----CCCCHHHHHHHHHHHHHHHHHhcCCCEEEEECCchhHHHHHHHHHHhCCCEEE-EECCcccccc----------c
Confidence 000111122344566777789999999997665444333 55688999754 3322210000 0
Q ss_pred CCCcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCC-CCCeEEecCCC-CCCCCccC-----
Q 012436 189 NNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPC-DTSGLQVL----- 261 (464)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~-~~~i~~i~~~~-d~~~~~~~----- 261 (464)
..+... .. ...+.+.+|.++++|+..++.+.+. |. ++++.+++|++ |...+...
T Consensus 152 --------~~~~~~---~~-------r~~~~~~a~~~~~~se~~~~~l~~~-G~~~~ki~vvGn~~~d~~~~~~~~~~~~ 212 (396)
T 3dzc_A 152 --------SPWPEE---GN-------RKLTAALTQYHFAPTDTSRANLLQE-NYNAENIFVTGNTVIDALLAVREKIHTD 212 (396)
T ss_dssp --------SSTTHH---HH-------HHHHHHTCSEEEESSHHHHHHHHHT-TCCGGGEEECCCHHHHHHHHHHHHHHHC
T ss_pred --------cCCcHH---HH-------HHHHHHhcCEEECCCHHHHHHHHHc-CCCcCcEEEECCcHHHHHHHhhhhcccc
Confidence 001010 00 1122478899999999999999886 54 57899998864 32111100
Q ss_pred ---------CCC-CCCCCcEE-EEEeccC-CCCChHHHHHHHHHHHHHhcCCCCCcEEEEE-cCCCCCccHHHHHHHHHH
Q 012436 262 ---------PLE-RSTEYPAI-ISVAQFR-PEKAHPLQLEAFSVALRKLDADLPRPRLQFV-GSCRNKSDEERLQSLKDK 328 (464)
Q Consensus 262 ---------~~~-~~~~~~~i-~~~G~~~-~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~-G~~~~~~~~~~~~~l~~~ 328 (464)
... .++++.++ ++.+|.. ..|+++.+++|++.+.++. |++++++. |.++ ...+.+++.
T Consensus 213 ~~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~~~~~~ll~A~~~l~~~~----~~~~~v~~~g~~~-----~~~~~l~~~ 283 (396)
T 3dzc_A 213 MDLQATLESQFPMLDASKKLILVTGHRRESFGGGFERICQALITTAEQH----PECQILYPVHLNP-----NVREPVNKL 283 (396)
T ss_dssp HHHHHHHHHTCTTCCTTSEEEEEECSCBCCCTTHHHHHHHHHHHHHHHC----TTEEEEEECCBCH-----HHHHHHHHH
T ss_pred hhhHHHHHHHhCccCCCCCEEEEEECCcccchhHHHHHHHHHHHHHHhC----CCceEEEEeCCCh-----HHHHHHHHH
Confidence 011 11223444 4454543 3478999999999998775 58888886 4331 223444443
Q ss_pred HHhcCCCCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEe-CCCCCccceecccCCccceeec
Q 012436 329 SIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAH-NSAGPKMDIVLEEDGQQTGFLA 407 (464)
Q Consensus 329 ~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~-~~~~~~~~~v~~~~~~~~g~~~ 407 (464)
++..++|.+.+++++.++..+|+.||++|.+| | |+ .+||+++|+|+|++ +.++. .+.+.. | .++++
T Consensus 284 ---~~~~~~v~~~~~lg~~~~~~l~~~ad~vv~~S---G-g~-~~EA~a~G~PvV~~~~~~~~-~e~v~~---G-~~~lv 350 (396)
T 3dzc_A 284 ---LKGVSNIVLIEPQQYLPFVYLMDRAHIILTDS---G-GI-QEEAPSLGKPVLVMRETTER-PEAVAA---G-TVKLV 350 (396)
T ss_dssp ---TTTCTTEEEECCCCHHHHHHHHHHCSEEEESC---S-GG-GTTGGGGTCCEEECCSSCSC-HHHHHH---T-SEEEC
T ss_pred ---HcCCCCEEEeCCCCHHHHHHHHHhcCEEEECC---c-cH-HHHHHHcCCCEEEccCCCcc-hHHHHc---C-ceEEc
Confidence 23356899999999889999999999999997 3 33 38999999999999 55655 677766 4 66777
Q ss_pred C-CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q 012436 408 Q-NAEEYADAIVKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAI 455 (464)
Q Consensus 408 ~-~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 455 (464)
+ |++++++++.++++ |++.+++|++++. .|.....++++.+.+
T Consensus 351 ~~d~~~l~~ai~~ll~-d~~~~~~m~~~~~----~~~~~~aa~ri~~~l 394 (396)
T 3dzc_A 351 GTNQQQICDALSLLLT-DPQAYQAMSQAHN----PYGDGKACQRIADIL 394 (396)
T ss_dssp TTCHHHHHHHHHHHHH-CHHHHHHHHTSCC----TTCCSCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHc-CHHHHHHHhhccC----CCcCChHHHHHHHHH
Confidence 6 89999999999999 9999988887654 344444555555544
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.3e-19 Score=177.02 Aligned_cols=367 Identities=11% Similarity=-0.008 Sum_probs=202.0
Q ss_pred cceEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeeccc--cc
Q 012436 34 TTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRK--WI 111 (464)
Q Consensus 34 ~mkI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 111 (464)
+|||+++.. .++|....+..++++|.++| ++|+++++.. ..+.. ...|+ +++.++... ..
T Consensus 7 m~kIl~~~~---~~~Gh~~p~~~la~~L~~~G--~~V~~~~~~~------~~~~~-~~~g~------~~~~~~~~~~~~~ 68 (430)
T 2iyf_A 7 PAHIAMFSI---AAHGHVNPSLEVIRELVARG--HRVTYAIPPV------FADKV-AATGP------RPVLYHSTLPGPD 68 (430)
T ss_dssp -CEEEEECC---SCHHHHGGGHHHHHHHHHTT--CEEEEEECGG------GHHHH-HTTSC------EEEECCCCSCCTT
T ss_pred cceEEEEeC---CCCccccchHHHHHHHHHCC--CeEEEEeCHH------HHHHH-HhCCC------EEEEcCCcCcccc
Confidence 479999742 23577888899999999999 5666666542 11111 11232 333332210 00
Q ss_pred cc-c--cCcceehh---hh-chhhhHHHHHHhhhcCCcEEEecccccccchhhhccCceEEEEeeCCcchhhhhhccccc
Q 012436 112 EE-S--TYPRFTMI---GQ-SFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREG 184 (464)
Q Consensus 112 ~~-~--~~~~~~~~---~~-~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~p~v~~~h~p~~~~~~~~~~~~~ 184 (464)
.. . .......+ .. .......+.+.+++.+||+||..........+++..++|++.+.+.+...........
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~-- 146 (430)
T 2iyf_A 69 ADPEAWGSTLLDNVEPFLNDAIQALPQLADAYADDIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVA-- 146 (430)
T ss_dssp SCGGGGCSSHHHHHHHHHHHHHHHHHHHHHHHTTSCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTH--
T ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccccc--
Confidence 00 0 00000000 00 1122344556678889999986443222223677889999988764321000000000
Q ss_pred ccccCCCcccccchhhhHHHHHHHHHHHHHHHH---------HhhcCCEEEEcCHHHHHHHHHHhCCCCC-eEEecCCCC
Q 012436 185 SSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGL---------VGSCADLAMVNSSWTQSHIEKLWGIPDR-IKRVYPPCD 254 (464)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~ad~vi~~S~~~~~~~~~~~~~~~~-i~~i~~~~d 254 (464)
............... +...+..+.+. ....+|.+++.+....+.....+ +.+ +..+.++++
T Consensus 147 ------~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~v~~vG~~~~ 217 (430)
T 2iyf_A 147 ------EPMWREPRQTERGRA-YYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPHADRV--DEDVYTFVGACQG 217 (430)
T ss_dssp ------HHHHHHHHHSHHHHH-HHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTTGGGS--CTTTEEECCCCC-
T ss_pred ------cchhhhhccchHHHH-HHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCCcccC--CCccEEEeCCcCC
Confidence 000000000000000 01111111111 22257888888876544332222 345 766766554
Q ss_pred CCC-CccCCCCCCCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEE-EEEcCCCCCccHHHHHHHHHHHHhc
Q 012436 255 TSG-LQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRL-QFVGSCRNKSDEERLQSLKDKSIEL 332 (464)
Q Consensus 255 ~~~-~~~~~~~~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l-~i~G~~~~~~~~~~~~~l~~~~~~~ 332 (464)
... .........++..+++++|++. .++.+.+.++++.+... |++++ +++|.++.. +.++
T Consensus 218 ~~~~~~~~~~~~~~~~~v~v~~Gs~~-~~~~~~~~~~~~~l~~~-----~~~~~~~~~G~~~~~------~~l~------ 279 (430)
T 2iyf_A 218 DRAEEGGWQRPAGAEKVVLVSLGSAF-TKQPAFYRECVRAFGNL-----PGWHLVLQIGRKVTP------AELG------ 279 (430)
T ss_dssp ----CCCCCCCTTCSEEEEEECTTTC-C-CHHHHHHHHHHHTTC-----TTEEEEEECC---CG------GGGC------
T ss_pred CCCCCCCCccccCCCCeEEEEcCCCC-CCcHHHHHHHHHHHhcC-----CCeEEEEEeCCCCCh------HHhc------
Confidence 221 0011111223446788899987 55555544444444321 36777 567876532 1221
Q ss_pred CCCCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCC---ccceecccCCccceeecC-
Q 012436 333 KVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGP---KMDIVLEEDGQQTGFLAQ- 408 (464)
Q Consensus 333 ~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~---~~~~v~~~~~~~~g~~~~- 408 (464)
.++++|.+.|++++. ++|+.||++|..+ ...+++|||++|+|+|+++..+. ..+.+.+ .+.|+.++
T Consensus 280 ~~~~~v~~~~~~~~~---~~l~~ad~~v~~~----G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~---~g~g~~~~~ 349 (430)
T 2iyf_A 280 ELPDNVEVHDWVPQL---AILRQADLFVTHA----GAGGSQEGLATATPMIAVPQAVDQFGNADMLQG---LGVARKLAT 349 (430)
T ss_dssp SCCTTEEEESSCCHH---HHHTTCSEEEECC----CHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH---TTSEEECCC
T ss_pred cCCCCeEEEecCCHH---HHhhccCEEEECC----CccHHHHHHHhCCCEEECCCccchHHHHHHHHH---cCCEEEcCC
Confidence 235789999999654 7899999998763 23789999999999999987542 0233445 57788775
Q ss_pred ---CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Q 012436 409 ---NAEEYADAIVKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIRPI 458 (464)
Q Consensus 409 ---~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 458 (464)
++++++++|.++++ |++.++++++.+++..+.++++.+++.+.+++++.
T Consensus 350 ~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 401 (430)
T 2iyf_A 350 EEATADLLRETALALVD-DPEVARRLRRIQAEMAQEGGTRRAADLIEAELPAR 401 (430)
T ss_dssp C-CCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHCHHHHHHHHHHTTSCC-
T ss_pred CCCCHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHhhcc
Confidence 88999999999999 99999999998888777788998888887776543
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=3.2e-20 Score=179.50 Aligned_cols=348 Identities=10% Similarity=-0.029 Sum_probs=181.1
Q ss_pred ccccccccceEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeee
Q 012436 27 HNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLY 106 (464)
Q Consensus 27 ~~~~~~~~mkI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (464)
...+++.+|||+|+... ++|....+..++++|.++|| +|.++++.. ..+.. ...|. .+..+.
T Consensus 8 ~~~~~~~~MrIl~~~~~---~~gh~~~~~~La~~L~~~Gh--eV~v~~~~~------~~~~~-~~~G~------~~~~~~ 69 (398)
T 4fzr_A 8 SGVPRGSHMRILVIAGC---SEGFVMPLVPLSWALRAAGH--EVLVAASEN------MGPTV-TGAGL------PFAPTC 69 (398)
T ss_dssp -------CCEEEEECCS---SHHHHGGGHHHHHHHHHTTC--EEEEEEEGG------GHHHH-HHTTC------CEEEEE
T ss_pred CCCCCCCceEEEEEcCC---CcchHHHHHHHHHHHHHCCC--EEEEEcCHH------HHHHH-HhCCC------eeEecC
Confidence 34456677999998754 34777778899999999995 555555421 11111 11233 233332
Q ss_pred cccc----cc----ccc--Cc-----ceehhhhc-----hhhhHHHHHHhhhcCCcEEEecccccccchhhhccCceEEE
Q 012436 107 RRKW----IE----EST--YP-----RFTMIGQS-----FGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVIC 166 (464)
Q Consensus 107 ~~~~----~~----~~~--~~-----~~~~~~~~-----~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~p~v~ 166 (464)
.... .. ... ++ ........ ......+.+.+++.+||+||..........+++..++|++.
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~~~~~~~~~a~~~giP~v~ 149 (398)
T 4fzr_A 70 PSLDMPEVLSWDREGNRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAERWKPDLVLTETYSLTGPLVAATLGIPWIE 149 (398)
T ss_dssp SSCCHHHHHSBCTTSCBCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCTHHHHHHHHHTCCEEE
T ss_pred CccchHhhhhhhccCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECccccHHHHHHHhhCCCEEE
Confidence 1000 00 000 00 00000000 11223456667888999998543222222266689999999
Q ss_pred EeeCCcchhhhhhcccccccccCCCcccccchhhhHHHHHHHHHHHHHHHHHh---hcCCEEEEcCHHHHHHHHHHhCCC
Q 012436 167 YTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVG---SCADLAMVNSSWTQSHIEKLWGIP 243 (464)
Q Consensus 167 ~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ad~vi~~S~~~~~~~~~~~~~~ 243 (464)
+.|.+.... .+.......... ...+..+ ...+..+..++...+...... .
T Consensus 150 ~~~~~~~~~----------------------~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 202 (398)
T 4fzr_A 150 QSIRLASPE----------------------LIKSAGVGELAP---ELAELGLTDFPDPLLSIDVCPPSMEAQPKPG--T 202 (398)
T ss_dssp ECCSSCCCH----------------------HHHHHHHHHTHH---HHHTTTCSSCCCCSEEEECSCGGGC----CC--C
T ss_pred eccCCCCch----------------------hhhHHHHHHHHH---HHHHcCCCCCCCCCeEEEeCChhhCCCCCCC--C
Confidence 888543110 000111111111 1111111 122455555443332221111 1
Q ss_pred CCeEEecCCCCCCCCccCCCCCCCCCcEEEEEeccCCCC----------ChHHHHHHHHHHHHHhcCCCCCcEEEEEcCC
Q 012436 244 DRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEK----------AHPLQLEAFSVALRKLDADLPRPRLQFVGSC 313 (464)
Q Consensus 244 ~~i~~i~~~~d~~~~~~~~~~~~~~~~~i~~~G~~~~~K----------~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~ 313 (464)
..+..++................+++.+++++|++...| .++.+++++..+ ++++++++++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~---------~~~~v~~~~~ 273 (398)
T 4fzr_A 203 TKMRYVPYNGRNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL---------GFEVVVAVSD 273 (398)
T ss_dssp EECCCCCCCCSSCCCCHHHHSCCSSCEEECC----------------CCSHHHHHHHGGGG---------TCEEEECCCC
T ss_pred CCeeeeCCCCCCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhC---------CCEEEEEeCC
Confidence 111122211011111100001124456778889986544 455555555443 6888888876
Q ss_pred CCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCC----C
Q 012436 314 RNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSA----G 389 (464)
Q Consensus 314 ~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~----~ 389 (464)
... +.++ +++++|.+.|++| +.++++.||++|.. +.+.+++|||++|+|+|+.... +
T Consensus 274 ~~~------~~l~------~~~~~v~~~~~~~---~~~ll~~ad~~v~~----gG~~t~~Ea~~~G~P~v~~p~~~~q~~ 334 (398)
T 4fzr_A 274 KLA------QTLQ------PLPEGVLAAGQFP---LSAIMPACDVVVHH----GGHGTTLTCLSEGVPQVSVPVIAEVWD 334 (398)
T ss_dssp --------------------CCTTEEEESCCC---HHHHGGGCSEEEEC----CCHHHHHHHHHTTCCEEECCCSGGGHH
T ss_pred cch------hhhc------cCCCcEEEeCcCC---HHHHHhhCCEEEec----CCHHHHHHHHHhCCCEEecCCchhHHH
Confidence 532 2333 2367999999984 67789999999954 4467899999999999996554 3
Q ss_pred CccceecccCCccceeecC----CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHH
Q 012436 390 PKMDIVLEEDGQQTGFLAQ----NAEEYADAIVKIISMPETERLEMAAAARRRAARFSEQRFYEDFK 452 (464)
Q Consensus 390 ~~~~~v~~~~~~~~g~~~~----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 452 (464)
. .+.+.+ .+.|+.++ ++++++++|.++++ |++.++++++.+++..+..+++.+++.+.
T Consensus 335 ~-a~~~~~---~g~g~~~~~~~~~~~~l~~ai~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 396 (398)
T 4fzr_A 335 S-ARLLHA---AGAGVEVPWEQAGVESVLAACARIRD-DSSYVGNARRLAAEMATLPTPADIVRLIE 396 (398)
T ss_dssp H-HHHHHH---TTSEEECC-------CHHHHHHHHHH-CTHHHHHHHHHHHHHTTSCCHHHHHHHHT
T ss_pred H-HHHHHH---cCCEEecCcccCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHcCCCHHHHHHHHh
Confidence 3 234555 67888875 78899999999999 99999999999888878899999887764
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.4e-18 Score=167.61 Aligned_cols=161 Identities=10% Similarity=0.052 Sum_probs=118.1
Q ss_pred CCcEEEEEeccCCCCCh-HHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCh
Q 012436 268 EYPAIISVAQFRPEKAH-PLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLY 346 (464)
Q Consensus 268 ~~~~i~~~G~~~~~K~~-~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~ 346 (464)
++.++++.|+....|+. ..+++++... .+. |++++++.|++... +.++ +++++|.+.|+++.
T Consensus 218 ~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~----p~~~~v~~~~~~~~------~~l~------~~~~~v~~~~~~~~ 280 (391)
T 3tsa_A 218 ARRVCICMGRMVLNATGPAPLLRAVAAA-TEL----PGVEAVIAVPPEHR------ALLT------DLPDNARIAESVPL 280 (391)
T ss_dssp SEEEEEECCHHHHHHHCSHHHHHHHHHH-HTS----TTEEEEEECCGGGG------GGCT------TCCTTEEECCSCCG
T ss_pred CCEEEEEcCCCCCcccchHHHHHHHHHh-ccC----CCeEEEEEECCcch------hhcc------cCCCCEEEeccCCH
Confidence 44566777887665444 7777777766 544 68999999876421 2221 24679999999976
Q ss_pred hHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCc---cceecccCCccceeecC------CHHHHHHHH
Q 012436 347 RDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPK---MDIVLEEDGQQTGFLAQ------NAEEYADAI 417 (464)
Q Consensus 347 ~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~---~~~v~~~~~~~~g~~~~------~~~~la~~i 417 (464)
.+ +++.||++|.. +.+.+++|||++|+|+|+....+.- .+.+.+ .+.|..++ +++++++++
T Consensus 281 ~~---ll~~ad~~v~~----~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~---~g~g~~~~~~~~~~~~~~l~~ai 350 (391)
T 3tsa_A 281 NL---FLRTCELVICA----GGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAA---AGAGICLPDEQAQSDHEQFTDSI 350 (391)
T ss_dssp GG---TGGGCSEEEEC----CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHH---TTSEEECCSHHHHTCHHHHHHHH
T ss_pred HH---HHhhCCEEEeC----CCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHH---cCCEEecCcccccCCHHHHHHHH
Confidence 54 46999999954 4456899999999999997553221 233445 57787664 589999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q 012436 418 VKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIR 456 (464)
Q Consensus 418 ~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 456 (464)
.++++ |++.++++++.+++..+..+++.+++.+.+++.
T Consensus 351 ~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 388 (391)
T 3tsa_A 351 ATVLG-DTGFAAAAIKLSDEITAMPHPAALVRTLENTAA 388 (391)
T ss_dssp HHHHT-CTHHHHHHHHHHHHHHTSCCHHHHHHHHHHC--
T ss_pred HHHHc-CHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHh
Confidence 99999 999999999888888788899888887776553
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=2.4e-18 Score=166.30 Aligned_cols=155 Identities=14% Similarity=0.069 Sum_probs=112.8
Q ss_pred CCCcEEEEEeccCCC-CChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCC
Q 012436 267 TEYPAIISVAQFRPE-KAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLL 345 (464)
Q Consensus 267 ~~~~~i~~~G~~~~~-K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~ 345 (464)
+++.+++++|++... ++.+.+.++++.+.+. ++++++++++.+. +.++ +++++|.+.|+++
T Consensus 231 ~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~------~~~~v~~~g~~~~------~~l~------~~~~~v~~~~~~~ 292 (398)
T 3oti_A 231 ARPEVAITMGTIELQAFGIGAVEPIIAAAGEV------DADFVLALGDLDI------SPLG------TLPRNVRAVGWTP 292 (398)
T ss_dssp SSCEEEECCTTTHHHHHCGGGHHHHHHHHHTS------SSEEEEECTTSCC------GGGC------SCCTTEEEESSCC
T ss_pred CCCEEEEEcCCCccccCcHHHHHHHHHHHHcC------CCEEEEEECCcCh------hhhc------cCCCcEEEEccCC
Confidence 345677888988544 3555555555555432 7889999887543 1221 3467999999984
Q ss_pred hhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEe----CCCCCcc--ceecccCCccceeecC----CHHHHHH
Q 012436 346 YRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAH----NSAGPKM--DIVLEEDGQQTGFLAQ----NAEEYAD 415 (464)
Q Consensus 346 ~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~----~~~~~~~--~~v~~~~~~~~g~~~~----~~~~la~ 415 (464)
+.++|+.||++|.. +.+.+++|||++|+|+|+. +..+. . +.+.+ .+.|+.++ +++.++
T Consensus 293 ---~~~ll~~ad~~v~~----~G~~t~~Eal~~G~P~v~~p~~~dq~~~-a~~~~~~~---~g~g~~~~~~~~~~~~l~- 360 (398)
T 3oti_A 293 ---LHTLLRTCTAVVHH----GGGGTVMTAIDAGIPQLLAPDPRDQFQH-TAREAVSR---RGIGLVSTSDKVDADLLR- 360 (398)
T ss_dssp ---HHHHHTTCSEEEEC----CCHHHHHHHHHHTCCEEECCCTTCCSSC-TTHHHHHH---HTSEEECCGGGCCHHHHH-
T ss_pred ---HHHHHhhCCEEEEC----CCHHHHHHHHHhCCCEEEcCCCchhHHH-HHHHHHHH---CCCEEeeCCCCCCHHHHH-
Confidence 55678999999964 4457899999999999995 44455 4 55566 67888775 444444
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q 012436 416 AIVKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAI 455 (464)
Q Consensus 416 ~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 455 (464)
++++ |++.++++++.+++..+..+++.+++.+.+++
T Consensus 361 ---~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 396 (398)
T 3oti_A 361 ---RLIG-DESLRTAAREVREEMVALPTPAETVRRIVERI 396 (398)
T ss_dssp ---HHHH-CHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred ---HHHc-CHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHh
Confidence 8888 99999999998888888899999998887664
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=99.76 E-value=4.8e-17 Score=157.39 Aligned_cols=366 Identities=12% Similarity=0.020 Sum_probs=195.1
Q ss_pred cceEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeeccccccc
Q 012436 34 TTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEE 113 (464)
Q Consensus 34 ~mkI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (464)
+|||+++... +.|.-..+..++++|.++| ++|+++++. ...+.. ...|. .+..+........
T Consensus 4 M~~il~~~~~---~~Ghv~~~~~La~~L~~~G--heV~v~~~~------~~~~~~-~~~G~------~~~~~~~~~~~~~ 65 (402)
T 3ia7_A 4 QRHILFANVQ---GHGHVYPSLGLVSELARRG--HRITYVTTP------LFADEV-KAAGA------EVVLYKSEFDTFH 65 (402)
T ss_dssp CCEEEEECCS---SHHHHHHHHHHHHHHHHTT--CEEEEEECH------HHHHHH-HHTTC------EEEECCCGGGTSS
T ss_pred CCEEEEEeCC---CCcccccHHHHHHHHHhCC--CEEEEEcCH------HHHHHH-HHcCC------EEEeccccccccc
Confidence 3599998653 2477788889999999999 566666642 121222 12233 3333321100000
Q ss_pred c---cC-----cceeh-hh-hchhhhHHHHHHhhhcCCcEEEecccccc-cchhhhccCceEEEEeeCCcchhhhhh--c
Q 012436 114 S---TY-----PRFTM-IG-QSFGSVYLSWEALCKFTPLYYFDTSGYAF-TYPLARIFGCRVICYTHYPTISLDMIS--R 180 (464)
Q Consensus 114 ~---~~-----~~~~~-~~-~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~-~~~~~~~~~~p~v~~~h~p~~~~~~~~--~ 180 (464)
. .. ..+.. .. ........+.+.+++.+||+||..+.... ...+++..++|++.+.|.......... .
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~~~~ 145 (402)
T 3ia7_A 66 VPEVVKQEDAETQLHLVYVRENVAILRAAEEALGDNPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHYSLFKE 145 (402)
T ss_dssp SSSSSCCTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTBCHHHH
T ss_pred ccccccccchHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCcccccccc
Confidence 0 00 00000 00 01112344556678889999986422222 222667899999988763321100000 0
Q ss_pred ccccccccCCCcccccchhhhHHHHHHHHHHHHH-----HHHHhhcC-CEEEEcCHHHHHHHHHHhCCCCCeEEecCCCC
Q 012436 181 VREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWM-----YGLVGSCA-DLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCD 254 (464)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~a-d~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d 254 (464)
.. ..+... ................... ........ |..++..+...+.....+ +.++.++.+.+.
T Consensus 146 ~~---~~~~~~----~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~vGp~~~ 216 (402)
T 3ia7_A 146 LW---KSNGQR----HPADVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPFAETF--DERFAFVGPTLT 216 (402)
T ss_dssp HH---HHHTCC----CGGGSHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTTGGGC--CTTEEECCCCCC
T ss_pred cc---cccccc----ChhhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCccccC--CCCeEEeCCCCC
Confidence 00 000000 0000000111111111000 00111222 666666665544433332 445666644432
Q ss_pred CCCC-ccCCCCCCCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEE-EcCCCCCccHHHHHHHHHHHHhc
Q 012436 255 TSGL-QVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQF-VGSCRNKSDEERLQSLKDKSIEL 332 (464)
Q Consensus 255 ~~~~-~~~~~~~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i-~G~~~~~~~~~~~~~l~~~~~~~ 332 (464)
.... ........+++.++++.|+....+ .+.+.++++.+. .. ++++++ +|.+... +.++
T Consensus 217 ~~~~~~~~~~~~~~~~~v~v~~G~~~~~~-~~~~~~~~~~~~-~~-----~~~~~~~~g~~~~~------~~~~------ 277 (402)
T 3ia7_A 217 GRDGQPGWQPPRPDAPVLLVSLGNQFNEH-PEFFRACAQAFA-DT-----PWHVVMAIGGFLDP------AVLG------ 277 (402)
T ss_dssp C----CCCCCSSTTCCEEEEECCSCSSCC-HHHHHHHHHHHT-TS-----SCEEEEECCTTSCG------GGGC------
T ss_pred CcccCCCCcccCCCCCEEEEECCCCCcch-HHHHHHHHHHHh-cC-----CcEEEEEeCCcCCh------hhhC------
Confidence 2111 110111234456778888876554 223333333332 21 466666 4544321 1221
Q ss_pred CCCCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCC-C----CCccceecccCCccceeec
Q 012436 333 KVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNS-A----GPKMDIVLEEDGQQTGFLA 407 (464)
Q Consensus 333 ~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~-~----~~~~~~v~~~~~~~~g~~~ 407 (464)
.++++|.+.|++++. ++|+.||++|..+ ...+++||+++|+|+|+... . +. .+.+.+ .+.|..+
T Consensus 278 ~~~~~v~~~~~~~~~---~ll~~ad~~v~~~----G~~t~~Ea~~~G~P~v~~p~~~~~q~~~-a~~~~~---~g~g~~~ 346 (402)
T 3ia7_A 278 PLPPNVEAHQWIPFH---SVLAHARACLTHG----TTGAVLEAFAAGVPLVLVPHFATEAAPS-AERVIE---LGLGSVL 346 (402)
T ss_dssp SCCTTEEEESCCCHH---HHHTTEEEEEECC----CHHHHHHHHHTTCCEEECGGGCGGGHHH-HHHHHH---TTSEEEC
T ss_pred CCCCcEEEecCCCHH---HHHhhCCEEEECC----CHHHHHHHHHhCCCEEEeCCCcccHHHH-HHHHHH---cCCEEEc
Confidence 136799999999654 8999999999763 23688999999999997654 3 22 234455 5778776
Q ss_pred C----CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Q 012436 408 Q----NAEEYADAIVKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIRP 457 (464)
Q Consensus 408 ~----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 457 (464)
+ +++++++++.++++ |++.++++++.+++..+..+++..++.+.+++.+
T Consensus 347 ~~~~~~~~~l~~~~~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 399 (402)
T 3ia7_A 347 RPDQLEPASIREAVERLAA-DSAVRERVRRMQRDILSSGGPARAADEVEAYLGR 399 (402)
T ss_dssp CGGGCSHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHc-CHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhh
Confidence 4 89999999999999 9999999988888777778888888888877754
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=1.3e-16 Score=154.95 Aligned_cols=366 Identities=11% Similarity=-0.024 Sum_probs=195.0
Q ss_pred ccccceEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeecccc
Q 012436 31 RNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKW 110 (464)
Q Consensus 31 ~~~~mkI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (464)
..++|||+++... +.|.-.-+..++++|.++| ++|.++++.. ..+... ..|. .+..+.....
T Consensus 17 ~~~m~rIl~~~~~---~~GHv~p~l~La~~L~~~G--h~V~v~~~~~------~~~~~~-~~G~------~~~~~~~~~~ 78 (415)
T 3rsc_A 17 GRHMAHLLIVNVA---SHGLILPTLTVVTELVRRG--HRVSYVTAGG------FAEPVR-AAGA------TVVPYQSEII 78 (415)
T ss_dssp --CCCEEEEECCS---CHHHHGGGHHHHHHHHHTT--CEEEEEECGG------GHHHHH-HTTC------EEEECCCSTT
T ss_pred cccCCEEEEEeCC---CccccccHHHHHHHHHHCC--CEEEEEeCHH------HHHHHH-hcCC------EEEecccccc
Confidence 4467899998653 3578888889999999999 5666666421 111111 1232 3333221100
Q ss_pred --------cccccCccee--hhhhchhhhHHHHHHhhhcCCcEEEecccccc-cchhhhccCceEEEEeeCCcchhh---
Q 012436 111 --------IEESTYPRFT--MIGQSFGSVYLSWEALCKFTPLYYFDTSGYAF-TYPLARIFGCRVICYTHYPTISLD--- 176 (464)
Q Consensus 111 --------~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~-~~~~~~~~~~p~v~~~h~p~~~~~--- 176 (464)
........+. ...........+.+.+++.+||+|+..+.... ...+++..++|++.+.|.......
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~ 158 (415)
T 3rsc_A 79 DADAAEVFGSDDLGVRPHLMYLRENVSVLRATAEALDGDVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEHYSF 158 (415)
T ss_dssp TCCHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHSSSCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSSCCH
T ss_pred ccccchhhccccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCcccc
Confidence 0000000000 00111122344556678889999985422222 222667899999998863321100
Q ss_pred ---hhhcccccccccCCCcccccchhhhHHHHHHHHHHHH------HHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeE
Q 012436 177 ---MISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSW------MYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIK 247 (464)
Q Consensus 177 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~ 247 (464)
.....+ .. .................. ........+|..++..+...+...... +.++.
T Consensus 159 ~~~~~~~~~-------~~----~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~ 225 (415)
T 3rsc_A 159 SQDMVTLAG-------TI----DPLDLPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIAGDTF--DDRFV 225 (415)
T ss_dssp HHHHHHHHT-------CC----CGGGCHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTTGGGC--CTTEE
T ss_pred ccccccccc-------cC----ChhhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCCcccC--CCceE
Confidence 000000 00 000001111111111110 001111122667766665544433322 34555
Q ss_pred EecCCCCCCCC-ccCCCCCCCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEE-EcCCCCCccHHHHHHH
Q 012436 248 RVYPPCDTSGL-QVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQF-VGSCRNKSDEERLQSL 325 (464)
Q Consensus 248 ~i~~~~d~~~~-~~~~~~~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i-~G~~~~~~~~~~~~~l 325 (464)
.+.+.+..... ........+.+.++++.|+.....+ +.+-..++.+ ... ++++++ +|.+.+. +.+
T Consensus 226 ~vGp~~~~~~~~~~~~~~~~~~~~v~v~~Gs~~~~~~-~~~~~~~~al-~~~-----~~~~v~~~g~~~~~------~~l 292 (415)
T 3rsc_A 226 FVGPCFDDRRFLGEWTRPADDLPVVLVSLGTTFNDRP-GFFRDCARAF-DGQ-----PWHVVMTLGGQVDP------AAL 292 (415)
T ss_dssp ECCCCCCCCGGGCCCCCCSSCCCEEEEECTTTSCCCH-HHHHHHHHHH-TTS-----SCEEEEECTTTSCG------GGG
T ss_pred EeCCCCCCcccCcCccccCCCCCEEEEECCCCCCChH-HHHHHHHHHH-hcC-----CcEEEEEeCCCCCh------HHh
Confidence 55433321111 1101112344567778888754432 2222222222 222 477777 5544322 122
Q ss_pred HHHHHhcCCCCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCc---cceecccCCcc
Q 012436 326 KDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPK---MDIVLEEDGQQ 402 (464)
Q Consensus 326 ~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~---~~~v~~~~~~~ 402 (464)
+ .++++|.+.|++++. ++|+.||++|..+ ...+++||+++|+|+|+....+.- .+.+.+ .+
T Consensus 293 ~------~~~~~v~~~~~~~~~---~ll~~ad~~v~~~----G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~---~g 356 (415)
T 3rsc_A 293 G------DLPPNVEAHRWVPHV---KVLEQATVCVTHG----GMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQ---LG 356 (415)
T ss_dssp C------CCCTTEEEESCCCHH---HHHHHEEEEEESC----CHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHH---HT
T ss_pred c------CCCCcEEEEecCCHH---HHHhhCCEEEECC----cHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHH---cC
Confidence 1 236799999999654 7899999999763 236889999999999996543210 233444 56
Q ss_pred ceeecC----CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Q 012436 403 TGFLAQ----NAEEYADAIVKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIRP 457 (464)
Q Consensus 403 ~g~~~~----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 457 (464)
.|..++ ++++++++|.++++ |++.++++.+.+++..+..+.+..++.+.+++.+
T Consensus 357 ~g~~~~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 414 (415)
T 3rsc_A 357 LGAVLPGEKADGDTLLAAVGAVAA-DPALLARVEAMRGHVRRAGGAARAADAVEAYLAR 414 (415)
T ss_dssp CEEECCGGGCCHHHHHHHHHHHHT-CHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred CEEEcccCCCCHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhc
Confidence 776664 89999999999999 9999998888887777778888888888777653
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.72 E-value=4.1e-16 Score=149.90 Aligned_cols=340 Identities=10% Similarity=-0.018 Sum_probs=191.1
Q ss_pred ceEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeeccc---cc
Q 012436 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRK---WI 111 (464)
Q Consensus 35 mkI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 111 (464)
|||+++.. .++|....+..++++|.++| ++|.++++.. ..+.. ...++ .++.+.... ..
T Consensus 1 MrIl~~~~---~~~Gh~~p~~~la~~L~~~G--h~V~~~~~~~------~~~~~-~~~g~------~~~~~~~~~~~~~~ 62 (384)
T 2p6p_A 1 MRILFVAA---GSPATVFALAPLATAARNAG--HQVVMAANQD------MGPVV-TGVGL------PAVATTDLPIRHFI 62 (384)
T ss_dssp CEEEEECC---SSHHHHHHHHHHHHHHHHTT--CEEEEEECGG------GHHHH-HHTTC------CEEESCSSCHHHHH
T ss_pred CEEEEEeC---CccchHhHHHHHHHHHHHCC--CEEEEEeCHH------HHHHH-HhCCC------EEEEeCCcchHHHH
Confidence 79999843 23578888899999999999 5666665431 11111 11232 222222111 00
Q ss_pred cc------ccC-c--c-eehh-hh----c-hhhhHHHHHHhhhcCCcEEEecccccccchhhhccCceEEEEeeCCcchh
Q 012436 112 EE------STY-P--R-FTMI-GQ----S-FGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISL 175 (464)
Q Consensus 112 ~~------~~~-~--~-~~~~-~~----~-~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~p~v~~~h~p~~~~ 175 (464)
.. ..+ + . ...+ .. . ......+.+.+++.+||+||..........+++..++|++.+.|.+...
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~~- 141 (384)
T 2p6p_A 63 TTDREGRPEAIPSDPVAQARFTGRWFARMAASSLPRMLDFSRAWRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVDA- 141 (384)
T ss_dssp HBCTTSCBCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCC-
T ss_pred hhhcccCccccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHhccCCcEEEECcchhhHHHHHHhcCCCEEEeccCCccc-
Confidence 00 000 0 0 0000 00 0 1123445566778899999965432222236778899999877744310
Q ss_pred hhhhcccccccccCCCcccccchhhhHHHHHHHHHHHHHHHH-Hhh---cCCEEEEcCHHHHHHHHHHhCCCCCeEEecC
Q 012436 176 DMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGL-VGS---CADLAMVNSSWTQSHIEKLWGIPDRIKRVYP 251 (464)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~ 251 (464)
. ..... .......+... .+. .++.+++.+....+.... .+ ..++..+
T Consensus 142 ------~---------------~~~~~----~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~-~~-~~~~~~~-- 192 (384)
T 2p6p_A 142 ------D---------------GIHPG----ADAELRPELSELGLERLPAPDLFIDICPPSLRPANA-AP-ARMMRHV-- 192 (384)
T ss_dssp ------T---------------TTHHH----HHHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCTTS-CC-CEECCCC--
T ss_pred ------c---------------hhhHH----HHHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCCCC-CC-CCceEec--
Confidence 0 00000 11111111111 011 167788777654322110 00 1122222
Q ss_pred CCCCC-CCccCCCCCCCCCcEEEEEeccCCC-------CChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHH
Q 012436 252 PCDTS-GLQVLPLERSTEYPAIISVAQFRPE-------KAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQ 323 (464)
Q Consensus 252 ~~d~~-~~~~~~~~~~~~~~~i~~~G~~~~~-------K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~ 323 (464)
+.+.+ ..........++..+++++|++... +.++.+++++..+ +++++++++++ ..+
T Consensus 193 ~~~~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~---------~~~~~~~~g~~------~~~ 257 (384)
T 2p6p_A 193 ATSRQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW---------DVELIVAAPDT------VAE 257 (384)
T ss_dssp CCCCCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT---------TCEEEEECCHH------HHH
T ss_pred CCCCCCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcC---------CcEEEEEeCCC------CHH
Confidence 11111 0000000112334678889998765 5667777776543 67888876542 113
Q ss_pred HHHHHHHhcCCCCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCC----CccceecccC
Q 012436 324 SLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAG----PKMDIVLEED 399 (464)
Q Consensus 324 ~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~----~~~~~v~~~~ 399 (464)
+++. ++++|.+ |++|. .++|+.||++|.. +.+.+++|||++|+|+|+.+..+ . .+.+.+
T Consensus 258 ~l~~------~~~~v~~-~~~~~---~~~l~~~d~~v~~----~G~~t~~Ea~~~G~P~v~~p~~~dq~~~-a~~~~~-- 320 (384)
T 2p6p_A 258 ALRA------EVPQARV-GWTPL---DVVAPTCDLLVHH----AGGVSTLTGLSAGVPQLLIPKGSVLEAP-ARRVAD-- 320 (384)
T ss_dssp HHHH------HCTTSEE-ECCCH---HHHGGGCSEEEEC----SCTTHHHHHHHTTCCEEECCCSHHHHHH-HHHHHH--
T ss_pred hhCC------CCCceEE-cCCCH---HHHHhhCCEEEeC----CcHHHHHHHHHhCCCEEEccCcccchHH-HHHHHH--
Confidence 3332 2578999 99964 4578999999976 33568999999999999998643 2 233444
Q ss_pred CccceeecC----CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q 012436 400 GQQTGFLAQ----NAEEYADAIVKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIR 456 (464)
Q Consensus 400 ~~~~g~~~~----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 456 (464)
.+.|+.++ ++++++++|.++++ |++.++++++.+++....-..+..++.+.+++.
T Consensus 321 -~g~g~~~~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 379 (384)
T 2p6p_A 321 -YGAAIALLPGEDSTEAIADSCQELQA-KDTYARRAQDLSREISGMPLPATVVTALEQLAH 379 (384)
T ss_dssp -HTSEEECCTTCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred -CCCeEecCcCCCCHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHhh
Confidence 56787764 79999999999999 999888888888777765677777776666554
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.5e-16 Score=151.65 Aligned_cols=273 Identities=10% Similarity=0.016 Sum_probs=173.9
Q ss_pred hhhHHHHHHhhhcCCcEEEecccccccch--hhhccCceEEEEeeCCcchhhhhhcccccccccCCCcccccchhhhHHH
Q 012436 127 GSVYLSWEALCKFTPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCK 204 (464)
Q Consensus 127 ~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~--~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (464)
..+..+.+.+++.+||+|+.+......++ .++..++|++ +++.+..+ +. ..+...
T Consensus 81 ~~~~~l~~~l~~~kPD~Vlv~gd~~~~~aalaA~~~~IPv~-h~eaglrs-------------~~-------~~~pee-- 137 (385)
T 4hwg_A 81 LVIEKVDEVLEKEKPDAVLFYGDTNSCLSAIAAKRRKIPIF-HMEAGNRC-------------FD-------QRVPEE-- 137 (385)
T ss_dssp HHHHHHHHHHHHHCCSEEEEESCSGGGGGHHHHHHTTCCEE-EESCCCCC-------------SC-------TTSTHH--
T ss_pred HHHHHHHHHHHhcCCcEEEEECCchHHHHHHHHHHhCCCEE-EEeCCCcc-------------cc-------ccCcHH--
Confidence 34566777789999999986654333332 5558899964 34422110 00 000000
Q ss_pred HHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCC-CCCCCc-----cC----CCCCCCCCcEEEE
Q 012436 205 IVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPC-DTSGLQ-----VL----PLERSTEYPAIIS 274 (464)
Q Consensus 205 ~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~-d~~~~~-----~~----~~~~~~~~~~i~~ 274 (464)
.. ...+-+.+|.+++.|+..++.+.+.+-.++++.++.|+. |.-.+. .. ....++++..+++
T Consensus 138 -~n-------R~~~~~~a~~~~~~te~~~~~l~~~G~~~~~I~vtGnp~~D~~~~~~~~~~~~~~~~~lgl~~~~~iLvt 209 (385)
T 4hwg_A 138 -IN-------RKIIDHISDVNITLTEHARRYLIAEGLPAELTFKSGSHMPEVLDRFMPKILKSDILDKLSLTPKQYFLIS 209 (385)
T ss_dssp -HH-------HHHHHHHCSEEEESSHHHHHHHHHTTCCGGGEEECCCSHHHHHHHHHHHHHHCCHHHHTTCCTTSEEEEE
T ss_pred -HH-------HHHHHhhhceeecCCHHHHHHHHHcCCCcCcEEEECCchHHHHHHhhhhcchhHHHHHcCCCcCCEEEEE
Confidence 01 122236789999999999999988743367899998864 321110 00 0111223445556
Q ss_pred EeccC---CCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhc-C---CCCcEEEccCCChh
Q 012436 275 VAQFR---PEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIEL-K---VDGNVEFYKNLLYR 347 (464)
Q Consensus 275 ~G~~~---~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~-~---l~~~v~~~g~~~~~ 347 (464)
.||.+ ..|+++.+++|+..+.++. ++.+++... + .+++.++++ + ..++|.+.+.+++.
T Consensus 210 ~hr~e~~~~~~~l~~ll~al~~l~~~~-----~~~vv~p~~-p---------~~~~~l~~~~~~~~~~~~v~l~~~lg~~ 274 (385)
T 4hwg_A 210 SHREENVDVKNNLKELLNSLQMLIKEY-----NFLIIFSTH-P---------RTKKRLEDLEGFKELGDKIRFLPAFSFT 274 (385)
T ss_dssp ECCC-----CHHHHHHHHHHHHHHHHH-----CCEEEEEEC-H---------HHHHHHHTSGGGGGTGGGEEECCCCCHH
T ss_pred eCCchhcCcHHHHHHHHHHHHHHHhcC-----CeEEEEECC-h---------HHHHHHHHHHHHhcCCCCEEEEcCCCHH
Confidence 66543 3377899999999987654 566666543 1 233444433 2 23689999999989
Q ss_pred HHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC-CHHHHHHHHHHHHcCCHH
Q 012436 348 DLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ-NAEEYADAIVKIISMPET 426 (464)
Q Consensus 348 ~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~-~~~~la~~i~~l~~~~~~ 426 (464)
++..+|+.||+++.+| |....||+++|+|+|+.+......+.+.. +++++++ |++++++++.++++ |+.
T Consensus 275 ~~~~l~~~adlvvt~S-----Ggv~~EA~alG~Pvv~~~~~ter~e~v~~----G~~~lv~~d~~~i~~ai~~ll~-d~~ 344 (385)
T 4hwg_A 275 DYVKLQMNAFCILSDS-----GTITEEASILNLPALNIREAHERPEGMDA----GTLIMSGFKAERVLQAVKTITE-EHD 344 (385)
T ss_dssp HHHHHHHHCSEEEECC-----TTHHHHHHHTTCCEEECSSSCSCTHHHHH----TCCEECCSSHHHHHHHHHHHHT-TCB
T ss_pred HHHHHHHhCcEEEECC-----ccHHHHHHHcCCCEEEcCCCccchhhhhc----CceEEcCCCHHHHHHHHHHHHh-ChH
Confidence 9999999999999765 44679999999999998765433566655 4778886 99999999999999 887
Q ss_pred HHHHHHHHHHHH-HHccCHHHHHHHHHHHH
Q 012436 427 ERLEMAAAARRR-AARFSEQRFYEDFKAAI 455 (464)
Q Consensus 427 ~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~ 455 (464)
.+++|++++..+ ....+.+++++.+.+.+
T Consensus 345 ~~~~m~~~~~~~~g~g~aa~rI~~~l~~~~ 374 (385)
T 4hwg_A 345 NNKRTQGLVPDYNEAGLVSKKILRIVLSYV 374 (385)
T ss_dssp TTBCCSCCCHHHHTCCCHHHHHHHHHHHHH
T ss_pred HHHHhhccCCCCCCCChHHHHHHHHHHHHh
Confidence 776665544444 33344455555444443
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=99.68 E-value=2.7e-15 Score=147.13 Aligned_cols=267 Identities=12% Similarity=0.085 Sum_probs=172.0
Q ss_pred HHHHHHhhhcCCcEEEecccccccch--hhhccCceEEEEee-CCcchhhhhhcccccccccCCCcccccchhhhHHHHH
Q 012436 130 YLSWEALCKFTPLYYFDTSGYAFTYP--LARIFGCRVICYTH-YPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIV 206 (464)
Q Consensus 130 ~~~~~~l~~~~~Dvv~~~~~~~~~~~--~~~~~~~p~v~~~h-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (464)
..+.+.+++.++||+++.+++..... ++..+-.|+-++.- +|...
T Consensus 339 ~~ia~~Ir~d~IDILVdL~g~t~~~~i~~aa~RpAPVQvs~lGyp~TT-------------------------------- 386 (631)
T 3q3e_A 339 EFIRSVCESNGAAIFYMPSIGMDMTTIFASNTRLAPIQAIALGHPATT-------------------------------- 386 (631)
T ss_dssp HHHHHHHHHHTCSEEEESCCSSSHHHHHHTTSCCSSEEEEECSSCSCC--------------------------------
T ss_pred HHHHHHHHhcCCCEEEECCCCCCchhHHHHhCCCchheEeccCCCccc--------------------------------
Confidence 45567788999999998777654333 33366778866444 44310
Q ss_pred HHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCC---CCCCCCccC--CCCCCC--CCcEEEEEeccC
Q 012436 207 YYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPP---CDTSGLQVL--PLERST--EYPAIISVAQFR 279 (464)
Q Consensus 207 ~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~---~d~~~~~~~--~~~~~~--~~~~i~~~G~~~ 279 (464)
.+...|++++-.... . -...| .+++..+|.. .++....+. +..... +.++++.++ .
T Consensus 387 -----------Gl~~iDY~i~D~~~~-~-~~~~y--sEklirLP~~~~~~~p~~~~p~r~~~~lp~~~G~v~Fg~fn--~ 449 (631)
T 3q3e_A 387 -----------HSDFIEYVIVEDDYV-G-SEECF--SETLLRLPKDALPYVPSALAPEKVDYLLRENPEVVNIGIAS--T 449 (631)
T ss_dssp -----------CCTTCCEEEEEGGGC-C-CGGGC--SSEEEEECTTSSCCCCCTTCCSSCCCCCCSCCSEEEEEEEE--C
T ss_pred -----------CcccCCEEEeCCCCC-C-cccCc--eeeEEECCCCccccCCcccCCccccccCCcCCCeEEEEECC--c
Confidence 014567777633211 1 12333 6777777753 222211111 111112 235556665 4
Q ss_pred CCCChHHHHHHHHHHHHHhcCCCCCcEEE--EEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHHHhcCc
Q 012436 280 PEKAHPLQLEAFSVALRKLDADLPRPRLQ--FVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAV 357 (464)
Q Consensus 280 ~~K~~~~ll~a~~~l~~~~~~~~p~~~l~--i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad 357 (464)
..|..+.+++++.++.++. |+..+. +.|.+... . +.+.+.+.+.|+.+++.|.|.++.++....|+.+|
T Consensus 450 ~~Ki~p~~l~~WarIL~~v----P~s~L~l~~~g~~~g~-~----~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~y~~aD 520 (631)
T 3q3e_A 450 TMKLNPYFLEALKAIRDRA----KVKVHFHFALGQSNGI-T----HPYVERFIKSYLGDSATAHPHSPYHQYLRILHNCD 520 (631)
T ss_dssp STTCCHHHHHHHHHHHHHC----SSEEEEEEEESSCCGG-G----HHHHHHHHHHHHGGGEEEECCCCHHHHHHHHHTCS
T ss_pred cccCCHHHHHHHHHHHHhC----CCcEEEEEecCCCchh-h----HHHHHHHHHcCCCccEEEcCCCCHHHHHHHHhcCc
Confidence 6799999999999999887 565553 35643211 1 23333455677778999999999999999999999
Q ss_pred EEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceeccc---CCcccee-ecCCHHHHHHHHHHHHcCCHHHHHHHHH
Q 012436 358 VGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEE---DGQQTGF-LAQNAEEYADAIVKIISMPETERLEMAA 433 (464)
Q Consensus 358 ~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~---~~~~~g~-~~~~~~~la~~i~~l~~~~~~~~~~~~~ 433 (464)
+++.|+.+ +.|++.+|||+||+|||+....+. .+-+... ..|-.++ +.+|.+++++...++.+ |++.++++++
T Consensus 521 IfLDpfpy-~GgtTtlEALwmGVPVVTl~G~~~-asRvgaSlL~~~GLpE~LIA~d~eeYv~~Av~La~-D~~~l~~LR~ 597 (631)
T 3q3e_A 521 MMVNPFPF-GNTNGIIDMVTLGLVGVCKTGAEV-HEHIDEGLFKRLGLPEWLIANTVDEYVERAVRLAE-NHQERLELRR 597 (631)
T ss_dssp EEECCSSS-CCSHHHHHHHHTTCCEEEECCSSH-HHHHHHHHHHHTTCCGGGEESSHHHHHHHHHHHHH-CHHHHHHHHH
T ss_pred EEEeCCcc-cCChHHHHHHHcCCCEEeccCCcH-HHHhHHHHHHhcCCCcceecCCHHHHHHHHHHHhC-CHHHHHHHHH
Confidence 99999865 459999999999999999775544 2222100 0033444 66799999999999999 9999999999
Q ss_pred HHHHHH-H--ccCHHHHHHHHHHHHHHHH
Q 012436 434 AARRRA-A--RFSEQRFYEDFKAAIRPIL 459 (464)
Q Consensus 434 ~~~~~~-~--~~s~~~~~~~~~~~~~~~~ 459 (464)
+.++.. . -|+ ...+++.+.|++++
T Consensus 598 ~Lr~~~~~spLFd--~~~~~~e~~ye~~~ 624 (631)
T 3q3e_A 598 YIIENNGLNTLFT--GDPRPMGQVFLEKL 624 (631)
T ss_dssp HHHHSCCHHHHTC--SCCTHHHHHHHHHH
T ss_pred HHHHHhhhCCCcc--hhHHHHHHHHHHHH
Confidence 988765 3 344 34445555554444
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.65 E-value=6.2e-15 Score=144.27 Aligned_cols=157 Identities=10% Similarity=0.014 Sum_probs=114.4
Q ss_pred CCcEEEEEeccCC-----CCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEcc
Q 012436 268 EYPAIISVAQFRP-----EKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYK 342 (464)
Q Consensus 268 ~~~~i~~~G~~~~-----~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g 342 (464)
...++++.|+... .+.+..+++++..+ ++++++.+++.+. +.++ +++++|.+.|
T Consensus 267 ~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~---------~~~~v~~~g~~~~------~~l~------~~~~~v~~~~ 325 (441)
T 2yjn_A 267 RRRVCLTLGISSRENSIGQVSIEELLGAVGDV---------DAEIIATFDAQQL------EGVA------NIPDNVRTVG 325 (441)
T ss_dssp SCEEEEEC----------CCSTTTTHHHHHTS---------SSEEEECCCTTTT------SSCS------SCCSSEEECC
T ss_pred CCEEEEECCCCcccccChHHHHHHHHHHHHcC---------CCEEEEEECCcch------hhhc------cCCCCEEEec
Confidence 3467788898865 37888888888654 6788887765432 1111 2467999999
Q ss_pred CCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCC---ccceecccCCccceeecC----CHHHHHH
Q 012436 343 NLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGP---KMDIVLEEDGQQTGFLAQ----NAEEYAD 415 (464)
Q Consensus 343 ~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~---~~~~v~~~~~~~~g~~~~----~~~~la~ 415 (464)
++|+. ++|..||++|.. +.+.+++||+++|+|+|+.+..+. ..+.+.+ .+.|+.++ +++++++
T Consensus 326 ~~~~~---~ll~~ad~~V~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~---~g~g~~~~~~~~~~~~l~~ 395 (441)
T 2yjn_A 326 FVPMH---ALLPTCAATVHH----GGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQE---FGAGIALPVPELTPDQLRE 395 (441)
T ss_dssp SCCHH---HHGGGCSEEEEC----CCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH---HTSEEECCTTTCCHHHHHH
T ss_pred CCCHH---HHHhhCCEEEEC----CCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHH---cCCEEEcccccCCHHHHHH
Confidence 99764 568999999964 335789999999999999987431 0233444 56787764 8999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q 012436 416 AIVKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIR 456 (464)
Q Consensus 416 ~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 456 (464)
+|.++++ |++.++++.+.+++..+..+.+.+++.+.+++.
T Consensus 396 ~i~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 435 (441)
T 2yjn_A 396 SVKRVLD-DPAHRAGAARMRDDMLAEPSPAEVVGICEELAA 435 (441)
T ss_dssp HHHHHHH-CHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHhc-CHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 9999999 999998888888877777888888887777654
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.62 E-value=2.8e-13 Score=131.81 Aligned_cols=375 Identities=12% Similarity=-0.003 Sum_probs=189.8
Q ss_pred ccccceEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeecc--
Q 012436 31 RNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRR-- 108 (464)
Q Consensus 31 ~~~~mkI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 108 (464)
++.+|||+++.. .+.|.-.-+..++++|.++| ++|+++++.. ...... ..|. +++.++..
T Consensus 9 ~m~~~~Il~~~~---~~~GHv~p~l~la~~L~~~G--h~V~~~~~~~---~~~~~~----~~g~------~~~~~~~~~~ 70 (424)
T 2iya_A 9 SVTPRHISFFNI---PGHGHVNPSLGIVQELVARG--HRVSYAITDE---FAAQVK----AAGA------TPVVYDSILP 70 (424)
T ss_dssp --CCCEEEEECC---SCHHHHHHHHHHHHHHHHTT--CEEEEEECGG---GHHHHH----HHTC------EEEECCCCSC
T ss_pred CcccceEEEEeC---CCCcccchHHHHHHHHHHCC--CeEEEEeCHH---HHHHHH----hCCC------EEEecCcccc
Confidence 345689999732 22478888899999999999 5666666532 111111 1133 23222211
Q ss_pred ccccc-ccCc-ce-ehh---hhch-hhhHHHHHHhhhcCCcEEEecccccccchhhhccCceEEEEeeCCcchhhhhhcc
Q 012436 109 KWIEE-STYP-RF-TMI---GQSF-GSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRV 181 (464)
Q Consensus 109 ~~~~~-~~~~-~~-~~~---~~~~-~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~p~v~~~h~p~~~~~~~~~~ 181 (464)
..... ...+ .. ..+ .... .....+.+.+++.+||+|+..........+++..|+|.+...+.+..........
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~ 150 (424)
T 2iya_A 71 KESNPEESWPEDQESAMGLFLDEAVRVLPQLEDAYADDRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDV 150 (424)
T ss_dssp CTTCTTCCCCSSHHHHHHHHHHHHHHHHHHHHHHTTTSCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHS
T ss_pred ccccchhhcchhHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEcCcccHHHHHHHhcCCCEEEEeccccccccccccc
Confidence 00000 0000 00 000 0001 1223344556778999888544332233377789999998776443111110000
Q ss_pred cccccccC-C-------Ccccccchhhh--HHHHHHHHHHHHH-HH--------HHhhcCCEEEEcCHHHHHHHHHHhCC
Q 012436 182 REGSSMYN-N-------NASIAQSNWLS--QCKIVYYTFFSWM-YG--------LVGSCADLAMVNSSWTQSHIEKLWGI 242 (464)
Q Consensus 182 ~~~~~~~~-~-------~~~~~~~~~~~--~~~~~~~~~~~~~-~~--------~~~~~ad~vi~~S~~~~~~~~~~~~~ 242 (464)
......+. . ........... .....+...+... .+ .....++.+++.+....+.-... .
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~~~~--~ 228 (424)
T 2iya_A 151 PAVQDPTADRGEEAAAPAGTGDAEEGAEAEDGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIKGDT--V 228 (424)
T ss_dssp GGGSCCCC---------------------HHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTTGGG--C
T ss_pred ccccccccccccccccccccccchhhhccchhHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCCccC--C
Confidence 00000000 0 00000000000 0000111111111 11 11124666776665443221111 1
Q ss_pred CCCeEEecCCCCCCC-CccCCCCCCCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEE-EEcCCCCCccHH
Q 012436 243 PDRIKRVYPPCDTSG-LQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQ-FVGSCRNKSDEE 320 (464)
Q Consensus 243 ~~~i~~i~~~~d~~~-~~~~~~~~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~-i~G~~~~~~~~~ 320 (464)
+.++..+.+...... .........++..++++.|+.. .+..+.+.++++.+.. ++++++ ++|.+.+.
T Consensus 229 ~~~~~~vGp~~~~~~~~~~~~~~~~~~~~v~v~~Gs~~-~~~~~~~~~~~~al~~------~~~~~~~~~g~~~~~---- 297 (424)
T 2iya_A 229 GDNYTFVGPTYGDRSHQGTWEGPGDGRPVLLIALGSAF-TDHLDFYRTCLSAVDG------LDWHVVLSVGRFVDP---- 297 (424)
T ss_dssp CTTEEECCCCCCCCGGGCCCCCCCSSCCEEEEECCSSS-CCCHHHHHHHHHHHTT------CSSEEEEECCTTSCG----
T ss_pred CCCEEEeCCCCCCcccCCCCCccCCCCCEEEEEcCCCC-cchHHHHHHHHHHHhc------CCcEEEEEECCcCCh----
Confidence 445666654432111 0000111223456777888876 3333433333343322 267774 45665422
Q ss_pred HHHHHHHHHHhcCCCCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCC---ccceecc
Q 012436 321 RLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGP---KMDIVLE 397 (464)
Q Consensus 321 ~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~---~~~~v~~ 397 (464)
+.+. .++++|.+.+++|+. ++|+.||++|.. +...+++||+++|+|+|+....+. ..+.+.+
T Consensus 298 --~~~~------~~~~~v~~~~~~~~~---~~l~~~d~~v~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~ 362 (424)
T 2iya_A 298 --ADLG------EVPPNVEVHQWVPQL---DILTKASAFITH----AGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVE 362 (424)
T ss_dssp --GGGC------SCCTTEEEESSCCHH---HHHTTCSEEEEC----CCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH
T ss_pred --HHhc------cCCCCeEEecCCCHH---HHHhhCCEEEEC----CchhHHHHHHHcCCCEEEecCccchHHHHHHHHH
Confidence 1111 246799999999664 689999998864 234789999999999999876421 0123344
Q ss_pred cCCccceeecC----CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q 012436 398 EDGQQTGFLAQ----NAEEYADAIVKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAI 455 (464)
Q Consensus 398 ~~~~~~g~~~~----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 455 (464)
.+.|+..+ ++++++++|.++++ |++.++++.+.+++..+....+..++.+.+++
T Consensus 363 ---~g~g~~~~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 420 (424)
T 2iya_A 363 ---LGLGRHIPRDQVTAEKLREAVLAVAS-DPGVAERLAAVRQEIREAGGARAAADILEGIL 420 (424)
T ss_dssp ---TTSEEECCGGGCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred ---CCCEEEcCcCCCCHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 46777664 89999999999999 99888877777666555555666666655554
|
| >4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=3.6e-13 Score=130.01 Aligned_cols=159 Identities=11% Similarity=0.012 Sum_probs=101.6
Q ss_pred CCCcEEEEEeccCCCCC-hHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCC
Q 012436 267 TEYPAIISVAQFRPEKA-HPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLL 345 (464)
Q Consensus 267 ~~~~~i~~~G~~~~~K~-~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~ 345 (464)
++..+++..|++...++ .+.+.+++..+.. .+..+++.+.+.+.+. ...+++++.+.+++|
T Consensus 236 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~------~~~~~v~~~~~~~~~~------------~~~~~~~v~~~~~~p 297 (400)
T 4amg_A 236 GRRRIAVTLGSIDALSGGIAKLAPLFSEVAD------VDAEFVLTLGGGDLAL------------LGELPANVRVVEWIP 297 (400)
T ss_dssp TCCEEEECCCSCC--CCSSSTTHHHHHHGGG------SSSEEEEECCTTCCCC------------CCCCCTTEEEECCCC
T ss_pred CCcEEEEeCCcccccCccHHHHHHHHHHhhc------cCceEEEEecCccccc------------cccCCCCEEEEeecC
Confidence 34456677788765443 3444444444332 2667777665433211 123468999999997
Q ss_pred hhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCc---cceecccCCccceeecCCHHHHHHHHHHHHc
Q 012436 346 YRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPK---MDIVLEEDGQQTGFLAQNAEEYADAIVKIIS 422 (464)
Q Consensus 346 ~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~---~~~v~~~~~~~~g~~~~~~~~la~~i~~l~~ 422 (464)
+. ++|..+|++|.- +...+++||+++|+|+|+....+.- .+.+.+ .+.|+..++.+..+++|.++++
T Consensus 298 ~~---~lL~~~~~~v~h----~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~---~G~g~~l~~~~~~~~al~~lL~ 367 (400)
T 4amg_A 298 LG---ALLETCDAIIHH----GGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTG---LGIGFDAEAGSLGAEQCRRLLD 367 (400)
T ss_dssp HH---HHHTTCSEEEEC----CCHHHHHHHHHHTCCEEECCC---CHHHHHHHHH---HTSEEECCTTTCSHHHHHHHHH
T ss_pred HH---HHhhhhhheecc----CCccHHHHHHHhCCCEEEecCcccHHHHHHHHHH---CCCEEEcCCCCchHHHHHHHHc
Confidence 55 568999998853 4456899999999999997655421 123334 4677777766667889999999
Q ss_pred CCHHHHHHHHHHHHHHHHccCHHHHHHHHHHH
Q 012436 423 MPETERLEMAAAARRRAARFSEQRFYEDFKAA 454 (464)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 454 (464)
|++.+++..+-+++....-+....++.+.++
T Consensus 368 -d~~~r~~a~~l~~~~~~~~~~~~~a~~le~l 398 (400)
T 4amg_A 368 -DAGLREAALRVRQEMSEMPPPAETAAXLVAL 398 (400)
T ss_dssp -CHHHHHHHHHHHHHHHTSCCHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHHHHcCCCHHHHHHHHHHh
Confidence 9987777666665555555777776666543
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=3.8e-11 Score=123.49 Aligned_cols=169 Identities=12% Similarity=0.091 Sum_probs=133.4
Q ss_pred CCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCC-CcEEEccCCChhHHHHHHhcCc
Q 012436 279 RPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVD-GNVEFYKNLLYRDLVKLLGGAV 357 (464)
Q Consensus 279 ~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~-~~v~~~g~~~~~~~~~~l~~ad 357 (464)
...|=-..+++.+.++.++. |+-+|++....... .+.+++.+++.|+. ++|.|.+..+.++....|+.+|
T Consensus 531 ~~~Ki~p~~~~~W~~IL~~v----P~S~L~Ll~~~~~~-----~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l~~~~~~D 601 (723)
T 4gyw_A 531 QLYKIDPSTLQMWANILKRV----PNSVLWLLRFPAVG-----EPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRGQLAD 601 (723)
T ss_dssp CGGGCCHHHHHHHHHHHHHC----SSEEEEEEETTGGG-----HHHHHHHHHHTTCCGGGEEEEECCCHHHHHHHGGGCS
T ss_pred ccccCCHHHHHHHHHHHHhC----CCCeEEEEeCcHHH-----HHHHHHHHHhcCCCcCeEEECCCCCHHHHHHHhCCCe
Confidence 56677788999999999988 78999888765322 36788888888884 6899999999999999999999
Q ss_pred EEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccc----eecccCCccceeecCCHHHHHHHHHHHHcCCHHHHHHHHH
Q 012436 358 VGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMD----IVLEEDGQQTGFLAQNAEEYADAIVKIISMPETERLEMAA 433 (464)
Q Consensus 358 ~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~----~v~~~~~~~~g~~~~~~~~la~~i~~l~~~~~~~~~~~~~ 433 (464)
+++-|.- -+.+++.+||+.+|+|||+-.-...... ++... |-.-+++.|.+++.+.-.++.+ |++.+.++++
T Consensus 602 i~LDt~p-~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~--gl~e~ia~~~~~Y~~~a~~la~-d~~~l~~lr~ 677 (723)
T 4gyw_A 602 VCLDTPL-CNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCL--GCLELIAKNRQEYEDIAVKLGT-DLEYLKKVRG 677 (723)
T ss_dssp EEECCSS-SCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHH--TCGGGBCSSHHHHHHHHHHHHH-CHHHHHHHHH
T ss_pred EEeCCCC-cCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHc--CCcccccCCHHHHHHHHHHHhc-CHHHHHHHHH
Confidence 9998743 4568899999999999998653322111 11110 2223566799999999999999 9999999998
Q ss_pred HHHHHH-H--ccCHHHHHHHHHHHHHHHHh
Q 012436 434 AARRRA-A--RFSEQRFYEDFKAAIRPILC 460 (464)
Q Consensus 434 ~~~~~~-~--~~s~~~~~~~~~~~~~~~~~ 460 (464)
.-++.. . -|+.+.+++.+++.|+++..
T Consensus 678 ~l~~~~~~s~l~d~~~~~~~le~a~~~~w~ 707 (723)
T 4gyw_A 678 KVWKQRISSPLFNTKQYTMELERLYLQMWE 707 (723)
T ss_dssp HHHHHHHHSSTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCcCcCHHHHHHHHHHHHHHHHH
Confidence 887766 3 59999999999999998865
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=99.39 E-value=5.8e-11 Score=115.01 Aligned_cols=153 Identities=14% Similarity=0.083 Sum_probs=101.9
Q ss_pred CcEEEEEecc-CCCCChHHHHHHHHHHHHHhcCCCCCcEEEEE-cCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCh
Q 012436 269 YPAIISVAQF-RPEKAHPLQLEAFSVALRKLDADLPRPRLQFV-GSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLY 346 (464)
Q Consensus 269 ~~~i~~~G~~-~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~-G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~ 346 (464)
..++++.|+. ...+..+.++++++.+ +.+++++ |.+... . .++++++.+.+++|+
T Consensus 239 ~~v~v~~Gs~~~~~~~~~~~~~al~~~---------~~~~v~~~g~~~~~--------~------~~~~~~v~~~~~~~~ 295 (415)
T 1iir_A 239 PPVYLGFGSLGAPADAVRVAIDAIRAH---------GRRVILSRGWADLV--------L------PDDGADCFAIGEVNH 295 (415)
T ss_dssp CCEEEECC---CCHHHHHHHHHHHHHT---------TCCEEECTTCTTCC--------C------SSCGGGEEECSSCCH
T ss_pred CeEEEeCCCCCCcHHHHHHHHHHHHHC---------CCeEEEEeCCCccc--------c------cCCCCCEEEeCcCCh
Confidence 4678888988 4677777777777654 4556555 654311 0 123568999999987
Q ss_pred hHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCc---cceecccCCccceeecC----CHHHHHHHHHH
Q 012436 347 RDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPK---MDIVLEEDGQQTGFLAQ----NAEEYADAIVK 419 (464)
Q Consensus 347 ~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~---~~~v~~~~~~~~g~~~~----~~~~la~~i~~ 419 (464)
.+ +|.+||++|.. +...+++||+++|+|+|+.+..+.- .+.+.+ .+.|+..+ +.++++++|.+
T Consensus 296 ~~---~l~~~d~~v~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~---~g~g~~~~~~~~~~~~l~~~i~~ 365 (415)
T 1iir_A 296 QV---LFGRVAAVIHH----GGAGTTHVAARAGAPQILLPQMADQPYYAGRVAE---LGVGVAHDGPIPTFDSLSAALAT 365 (415)
T ss_dssp HH---HGGGSSEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH---HTSEEECSSSSCCHHHHHHHHHH
T ss_pred HH---HHhhCCEEEeC----CChhHHHHHHHcCCCEEECCCCCccHHHHHHHHH---CCCcccCCcCCCCHHHHHHHHHH
Confidence 54 57999999975 2237999999999999998765420 123444 46777664 89999999999
Q ss_pred HHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHh
Q 012436 420 IISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIRPILC 460 (464)
Q Consensus 420 l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 460 (464)
+ + |++.++++.+.+++ +....-.++..+.++++++
T Consensus 366 l-~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~i~~~~~ 400 (415)
T 1iir_A 366 A-L-TPETHARATAVAGT----IRTDGAAVAARLLLDAVSR 400 (415)
T ss_dssp H-T-SHHHHHHHHHHHHH----SCSCHHHHHHHHHHHHHHT
T ss_pred H-c-CHHHHHHHHHHHHH----HhhcChHHHHHHHHHHHHh
Confidence 9 8 98776666554443 3334444555555555544
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=7.8e-11 Score=113.60 Aligned_cols=153 Identities=14% Similarity=0.099 Sum_probs=97.0
Q ss_pred CCcEEEEEeccC-CCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCh
Q 012436 268 EYPAIISVAQFR-PEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLY 346 (464)
Q Consensus 268 ~~~~i~~~G~~~-~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~ 346 (464)
++.++++.|+.. ..+.++.+++++..+ ++++++.++..+.+ ..+.++++.+.+++|.
T Consensus 221 ~~~Vlv~~Gs~~~~~~~~~~~~~al~~~---------~~~vv~~~g~~~~~-------------~~~~~~~v~~~~~~~~ 278 (404)
T 3h4t_A 221 SPPVYVGFGSGPAPAEAARVAIEAVRAQ---------GRRVVLSSGWAGLG-------------RIDEGDDCLVVGEVNH 278 (404)
T ss_dssp SCCEEECCTTSCCCTTHHHHHHHHHHHT---------TCCEEEECTTTTCC-------------CSSCCTTEEEESSCCH
T ss_pred CCeEEEECCCCCCcHHHHHHHHHHHHhC---------CCEEEEEeCCcccc-------------cccCCCCEEEecCCCH
Confidence 456777888887 556667777776654 56777765543221 1133679999999965
Q ss_pred hHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCcc---ceecccCCccceeecC----CHHHHHHHHHH
Q 012436 347 RDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKM---DIVLEEDGQQTGFLAQ----NAEEYADAIVK 419 (464)
Q Consensus 347 ~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~---~~v~~~~~~~~g~~~~----~~~~la~~i~~ 419 (464)
.+++..||++|..+ ...++.||+++|+|+|+....+.-. +.+.. .+.|...+ +++++++++.+
T Consensus 279 ---~~ll~~~d~~v~~g----G~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~---~G~g~~l~~~~~~~~~l~~ai~~ 348 (404)
T 3h4t_A 279 ---QVLFGRVAAVVHHG----GAGTTTAVTRAGAPQVVVPQKADQPYYAGRVAD---LGVGVAHDGPTPTVESLSAALAT 348 (404)
T ss_dssp ---HHHGGGSSEEEECC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH---HTSEEECSSSSCCHHHHHHHHHH
T ss_pred ---HHHHhhCcEEEECC----cHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHH---CCCEeccCcCCCCHHHHHHHHHH
Confidence 45678999999652 2368999999999999987654311 12333 46666653 89999999999
Q ss_pred HHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q 012436 420 IISMPETERLEMAAAARRRAARFSEQRFYEDFKAAI 455 (464)
Q Consensus 420 l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 455 (464)
+++ ++.++++.+.+.+... ...+..++.+.+.+
T Consensus 349 ll~--~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~ 381 (404)
T 3h4t_A 349 ALT--PGIRARAAAVAGTIRT-DGTTVAAKLLLEAI 381 (404)
T ss_dssp HTS--HHHHHHHHHHHTTCCC-CHHHHHHHHHHHHH
T ss_pred HhC--HHHHHHHHHHHHHHhh-hHHHHHHHHHHHHH
Confidence 985 4444444433332212 34444444444433
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.24 E-value=2.6e-11 Score=101.86 Aligned_cols=130 Identities=10% Similarity=0.077 Sum_probs=94.4
Q ss_pred CCcEEEEEeccC---CCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCC
Q 012436 268 EYPAIISVAQFR---PEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNL 344 (464)
Q Consensus 268 ~~~~i~~~G~~~---~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~ 344 (464)
...+++++|++. ..|.+..+++++..+ +.++++++++... + +++++|.+.|++
T Consensus 21 ~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~---------~~~~~~~~g~~~~------~---------~~~~~v~~~~~~ 76 (170)
T 2o6l_A 21 NGVVVFSLGSMVSNMTEERANVIASALAQI---------PQKVLWRFDGNKP------D---------TLGLNTRLYKWI 76 (170)
T ss_dssp TCEEEEECCSCCTTCCHHHHHHHHHHHTTS---------SSEEEEECCSSCC------T---------TCCTTEEEESSC
T ss_pred CCEEEEECCCCcccCCHHHHHHHHHHHHhC---------CCeEEEEECCcCc------c---------cCCCcEEEecCC
Confidence 456788899885 556677777776543 5688887765432 1 235799999999
Q ss_pred ChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCc---cceecccCCccceeecC----CHHHHHHHH
Q 012436 345 LYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPK---MDIVLEEDGQQTGFLAQ----NAEEYADAI 417 (464)
Q Consensus 345 ~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~---~~~v~~~~~~~~g~~~~----~~~~la~~i 417 (464)
|++++..+ +.||++|.. +.+.+++|||++|+|+|+.+..+.- .+.+.+ .+.|+.++ ++++++++|
T Consensus 77 ~~~~~l~~-~~ad~~I~~----~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~---~g~g~~~~~~~~~~~~l~~~i 148 (170)
T 2o6l_A 77 PQNDLLGH-PKTRAFITH----GGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKA---RGAAVRVDFNTMSSTDLLNAL 148 (170)
T ss_dssp CHHHHHTS-TTEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHT---TTSEEECCTTTCCHHHHHHHH
T ss_pred CHHHHhcC-CCcCEEEEc----CCccHHHHHHHcCCCEEeccchhhHHHHHHHHHH---cCCeEEeccccCCHHHHHHHH
Confidence 87655432 999999974 3458999999999999999865320 234455 57887775 899999999
Q ss_pred HHHHcCCHHHHHH
Q 012436 418 VKIISMPETERLE 430 (464)
Q Consensus 418 ~~l~~~~~~~~~~ 430 (464)
.++++ |++.+++
T Consensus 149 ~~ll~-~~~~~~~ 160 (170)
T 2o6l_A 149 KRVIN-DPSYKEN 160 (170)
T ss_dssp HHHHH-CHHHHHH
T ss_pred HHHHc-CHHHHHH
Confidence 99999 8864443
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=99.22 E-value=6.4e-10 Score=107.68 Aligned_cols=133 Identities=15% Similarity=0.080 Sum_probs=90.5
Q ss_pred CcEEEEEeccC---CCCChHHHHHHHHHHHHHhcCCCCCcEEEEE-cCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCC
Q 012436 269 YPAIISVAQFR---PEKAHPLQLEAFSVALRKLDADLPRPRLQFV-GSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNL 344 (464)
Q Consensus 269 ~~~i~~~G~~~---~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~-G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~ 344 (464)
..++++.|+.. ..+..+.++++++.+ +.+++++ |.+... . ..+++++.+.+++
T Consensus 238 ~~v~v~~Gs~~~~~~~~~~~~~~~al~~~---------~~~~v~~~g~~~~~--------~------~~~~~~v~~~~~~ 294 (416)
T 1rrv_A 238 PPVHIGFGSSSGRGIADAAKVAVEAIRAQ---------GRRVILSRGWTELV--------L------PDDRDDCFAIDEV 294 (416)
T ss_dssp CCEEECCTTCCSHHHHHHHHHHHHHHHHT---------TCCEEEECTTTTCC--------C------SCCCTTEEEESSC
T ss_pred CeEEEecCCCCccChHHHHHHHHHHHHHC---------CCeEEEEeCCcccc--------c------cCCCCCEEEeccC
Confidence 45677788874 345556666666543 5566665 654211 0 1246789999999
Q ss_pred ChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCc---cceecccCCccceeecC----CHHHHHHHH
Q 012436 345 LYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPK---MDIVLEEDGQQTGFLAQ----NAEEYADAI 417 (464)
Q Consensus 345 ~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~---~~~v~~~~~~~~g~~~~----~~~~la~~i 417 (464)
|. .++|..||++|.- +...+++||+++|+|+|+.+..+.- .+.+.+ .+.|...+ +.++++++|
T Consensus 295 ~~---~~ll~~~d~~v~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~---~g~g~~~~~~~~~~~~l~~~i 364 (416)
T 1rrv_A 295 NF---QALFRRVAAVIHH----GSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAA---LGIGVAHDGPTPTFESLSAAL 364 (416)
T ss_dssp CH---HHHGGGSSEEEEC----CCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHH---HTSEEECSSSCCCHHHHHHHH
T ss_pred Ch---HHHhccCCEEEec----CChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHH---CCCccCCCCCCCCHHHHHHHH
Confidence 75 4568999999963 3356999999999999998764321 122334 46676653 899999999
Q ss_pred HHHHcCCHHHHHHHHHHHH
Q 012436 418 VKIISMPETERLEMAAAAR 436 (464)
Q Consensus 418 ~~l~~~~~~~~~~~~~~~~ 436 (464)
.++ + |++.++++++.++
T Consensus 365 ~~l-~-~~~~~~~~~~~~~ 381 (416)
T 1rrv_A 365 TTV-L-APETRARAEAVAG 381 (416)
T ss_dssp HHH-T-SHHHHHHHHHHTT
T ss_pred HHh-h-CHHHHHHHHHHHH
Confidence 999 8 9877666655444
|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=3.3e-09 Score=106.46 Aligned_cols=240 Identities=13% Similarity=0.075 Sum_probs=163.1
Q ss_pred HHHHHhhcCCEEEEcCHHHHHHHHH-----Hh-CCCCCeEEecCCCCCCCCc----c-----------------------
Q 012436 214 MYGLVGSCADLAMVNSSWTQSHIEK-----LW-GIPDRIKRVYPPCDTSGLQ----V----------------------- 260 (464)
Q Consensus 214 ~~~~~~~~ad~vi~~S~~~~~~~~~-----~~-~~~~~i~~i~~~~d~~~~~----~----------------------- 260 (464)
|....+..++.|-++|+...+.++. .+ ..+.++.-+-||++...+. +
T Consensus 406 Ma~lai~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~w~~d~~~l~~ 485 (796)
T 1l5w_A 406 MANLCVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLIN 485 (796)
T ss_dssp HHHHHHHHSSEEEESSHHHHHHHHHTTSHHHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGG
T ss_pred HHHHHHHhcCccccccHHHHHHHHhHHhhHHHHhCccccCCCcCCCcHHHhhcccCHhHHHHHHHhcCcccccCHHHHHH
Confidence 4567789999999999999999864 11 1267888899999764431 0
Q ss_pred ----CC----------------------------CCCCCCCcEEEEEeccCCCCChHH-HHHHHHHHHHHhcC---CCCC
Q 012436 261 ----LP----------------------------LERSTEYPAIISVAQFRPEKAHPL-QLEAFSVALRKLDA---DLPR 304 (464)
Q Consensus 261 ----~~----------------------------~~~~~~~~~i~~~G~~~~~K~~~~-ll~a~~~l~~~~~~---~~p~ 304 (464)
.+ ....++.+.++++.|+...|+.++ ++..+..+.+-..+ ...+
T Consensus 486 l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p 565 (796)
T 1l5w_A 486 LEKFADDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVP 565 (796)
T ss_dssp GGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCC
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCC
Confidence 00 001146688999999999999999 88888777652211 0126
Q ss_pred cEEEEEcCCCCCccH--HHHHHHHHHHH----hcCCCC--cEEEccCCChhHHHHHHhcCcEEEEcCC--CCCCChHHHH
Q 012436 305 PRLQFVGSCRNKSDE--ERLQSLKDKSI----ELKVDG--NVEFYKNLLYRDLVKLLGGAVVGIHSMI--DEHFGISVVE 374 (464)
Q Consensus 305 ~~l~i~G~~~~~~~~--~~~~~l~~~~~----~~~l~~--~v~~~g~~~~~~~~~~l~~ad~~v~ps~--~e~~~~~~~E 374 (464)
+++++.|.+...... ...+.+.+.++ +-..++ +|.|+...+.+-...++++||+.++||. .|++|++-+-
T Consensus 566 ~q~If~GKA~P~y~~aK~iIk~i~~va~~in~Dp~~~~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MK 645 (796)
T 1l5w_A 566 RVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMK 645 (796)
T ss_dssp EEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHH
T ss_pred eEEEEEecCChhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHH
Confidence 899999987543211 11122333333 113456 7999988888889999999999999998 9999999999
Q ss_pred HHHhCCcEEEeCCCCCccceecccCCccceeecC-CHHHHHHHHHH-------HHcCCHHHHHHHHHHHHHHHHccCHHH
Q 012436 375 YMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ-NAEEYADAIVK-------IISMPETERLEMAAAARRRAARFSEQR 446 (464)
Q Consensus 375 a~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~-~~~~la~~i~~-------l~~~~~~~~~~~~~~~~~~~~~~s~~~ 446 (464)
+|..|++.|++--|.. .|+.+ +.+.+|||++. +.+++.+.-.. ... ++ ..+++.+++.. ..|||+.
T Consensus 646 am~NGaL~iGtLDGan-vEi~e-~vG~~NgF~FG~~~~ev~~l~~~~y~a~~~y~~-~~-~~~~vvd~~~~--g~fs~~~ 719 (796)
T 1l5w_A 646 LALNGALTVGTLDGAN-VEIAE-KVGEENIFIFGHTVEQVKAILAKGYDPVKWRKK-DK-VLDAVLKELES--GKYSDGD 719 (796)
T ss_dssp HHHTTCEEEECSCTTH-HHHHH-HHCGGGSEECSCCHHHHHHHHHHCCCHHHHHHH-CH-HHHHHHHHHHH--TTTTTTC
T ss_pred HHHcCCeeecCcCCee-eehhh-ccCCCcEEEecCCHHHHHHHHHcccCHHHHhhc-CH-HHHHHHHHHHc--CCCCCCc
Confidence 9999999998876666 45532 22357999997 77777643222 222 33 23333333322 6799877
Q ss_pred HHHHHHHHHHHHHh
Q 012436 447 FYEDFKAAIRPILC 460 (464)
Q Consensus 447 ~~~~~~~~~~~~~~ 460 (464)
- ..+..+|++++.
T Consensus 720 ~-~~y~~Ly~~L~~ 732 (796)
T 1l5w_A 720 K-HAFDQMLHSIGK 732 (796)
T ss_dssp T-TTTHHHHHHTST
T ss_pred H-HHHHHHHHHHhc
Confidence 4 668888877653
|
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... | Back alignment and structure |
|---|
Probab=98.84 E-value=5.5e-07 Score=90.97 Aligned_cols=198 Identities=14% Similarity=0.086 Sum_probs=139.4
Q ss_pred HHHHHhhcCCEEEEcCHHHHHHHHHH-----hC-CCCCeEEecCCCCCCCCc----c-----------------------
Q 012436 214 MYGLVGSCADLAMVNSSWTQSHIEKL-----WG-IPDRIKRVYPPCDTSGLQ----V----------------------- 260 (464)
Q Consensus 214 ~~~~~~~~ad~vi~~S~~~~~~~~~~-----~~-~~~~i~~i~~~~d~~~~~----~----------------------- 260 (464)
|....+..++.|-++|+...+.+++. +. .+.++.-+-||++...+. +
T Consensus 430 Ma~lai~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~lI~~~ig~~W~~~~~~l~~ 509 (824)
T 2gj4_A 430 MAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRK 509 (824)
T ss_dssp HHHHHHHTCSCEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGGG
T ss_pred HHHHHHHhcCceeeEcHHHHHHHhhHHhHHHHHcChhhcccccCCcChhhhcccCCHhHHHHHHHhcCchhhhCHHHHHH
Confidence 45567899999999999998888531 11 167888899999887661 0
Q ss_pred ---CCC-----------------------------CCCCCCcEEEEEeccCCCCChHHH-HHHHHHHHH--Hhc-CCCCC
Q 012436 261 ---LPL-----------------------------ERSTEYPAIISVAQFRPEKAHPLQ-LEAFSVALR--KLD-ADLPR 304 (464)
Q Consensus 261 ---~~~-----------------------------~~~~~~~~i~~~G~~~~~K~~~~l-l~a~~~l~~--~~~-~~~p~ 304 (464)
... ...++.+.++++.|+...|+.+++ +..+..+.+ ..+ ....+
T Consensus 510 L~~y~~d~~~~~~~~~~K~~nK~~la~~l~~~~Gl~vdpd~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p 589 (824)
T 2gj4_A 510 LLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVP 589 (824)
T ss_dssp GGGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCC
T ss_pred HHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCC
Confidence 000 001456899999999999999997 777777642 211 00115
Q ss_pred cEEEEEcCCCCCccH--HHHHHHHHHHHhc----CCCC--cEEEccCCChhHHHHHHhcCcEEEEcCC--CCCCChHHHH
Q 012436 305 PRLQFVGSCRNKSDE--ERLQSLKDKSIEL----KVDG--NVEFYKNLLYRDLVKLLGGAVVGIHSMI--DEHFGISVVE 374 (464)
Q Consensus 305 ~~l~i~G~~~~~~~~--~~~~~l~~~~~~~----~l~~--~v~~~g~~~~~~~~~~l~~ad~~v~ps~--~e~~~~~~~E 374 (464)
.++++.|.+...... ...+.+.+.++.. .+++ +|.|+...+.+-...++++||+.++||. .|++|++-+-
T Consensus 590 ~q~If~GKA~P~y~~aK~iIkli~~va~~in~Dp~v~~~lKVvFl~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MK 669 (824)
T 2gj4_A 590 RTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMK 669 (824)
T ss_dssp EEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHH
T ss_pred EEEEEEEeCCHhHHHHHHHHHHHHHHHHHhccCcccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHH
Confidence 799999987543211 1122244444432 2345 7999988888888999999999999998 9999999999
Q ss_pred HHHhCCcEEEeCCCCCccceecccCCccceeecC-CHHHH
Q 012436 375 YMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ-NAEEY 413 (464)
Q Consensus 375 a~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~-~~~~l 413 (464)
+|..|++.|++--|.. -|+.+ +.+.+|||++. ..+++
T Consensus 670 amlNGaLtigtlDGan-vEi~e-~vG~~Ngf~FG~~~~ev 707 (824)
T 2gj4_A 670 FMLNGALTIGTMDGAN-VEMAE-EAGEENFFIFGMRVEDV 707 (824)
T ss_dssp HHHTTCEEEECSCTTH-HHHHH-HHCGGGSEECSCCHHHH
T ss_pred HHHcCceEEEEecCcc-chhhh-ccCCCCEEEeCCcHHHH
Confidence 9999999999876655 35532 11257899997 66665
|
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} | Back alignment and structure |
|---|
Probab=98.84 E-value=7e-08 Score=97.04 Aligned_cols=241 Identities=13% Similarity=0.107 Sum_probs=160.9
Q ss_pred HHHHHHhhcCCEEEEcCHHHHHHHHH-----HhC-CCCCeEEecCCCCCCCCc----c----------------------
Q 012436 213 WMYGLVGSCADLAMVNSSWTQSHIEK-----LWG-IPDRIKRVYPPCDTSGLQ----V---------------------- 260 (464)
Q Consensus 213 ~~~~~~~~~ad~vi~~S~~~~~~~~~-----~~~-~~~~i~~i~~~~d~~~~~----~---------------------- 260 (464)
.|....+..++.|-++|+...+.++. .+. .+.++.-+-||++...+. +
T Consensus 394 nMa~lai~~S~~VNgVS~lHae~ik~~~f~~~~~~~p~kf~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~d~~~l 473 (796)
T 2c4m_A 394 HMAWIACYAAYSINGVAALHTEIIKAETLADWYALWPEKFNNKTNGVTPRRWLRMINPGLSDLLTRLSGSDDWVTDLDEL 473 (796)
T ss_dssp EHHHHHHHHCSEEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCTTCHHHHHHHHHHHSSSGGGGCGGGG
T ss_pred cHHHHHHHhcCceeeccHHHHHHhhhhhhhhHHHcCccccccccCCcchHHhhcccCHhHHHHHHHhcCchhhhhChHHH
Confidence 34567789999999999999999874 111 267888899999887772 0
Q ss_pred ------CCC----------------------------CCCCCCcEEEEEeccCCCCChHH-HHHHHHHHHHHhcC---CC
Q 012436 261 ------LPL----------------------------ERSTEYPAIISVAQFRPEKAHPL-QLEAFSVALRKLDA---DL 302 (464)
Q Consensus 261 ------~~~----------------------------~~~~~~~~i~~~G~~~~~K~~~~-ll~a~~~l~~~~~~---~~ 302 (464)
.+. ...++.+.++++.|+...|+.++ ++..+..+.+-..+ ..
T Consensus 474 ~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~ 553 (796)
T 2c4m_A 474 KKLRSYADDKSVLEELRAIKAANKQDFAEWILERQGIEIDPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDI 553 (796)
T ss_dssp GGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSS
T ss_pred HHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCC
Confidence 000 00145689999999999999999 88888877642111 01
Q ss_pred CCcEEEEEcCCCCCccH--HHHHHHHHHHH----hcCCCC--cEEEccCCChhHHHHHHhcCcEEEEcCC--CCCCChHH
Q 012436 303 PRPRLQFVGSCRNKSDE--ERLQSLKDKSI----ELKVDG--NVEFYKNLLYRDLVKLLGGAVVGIHSMI--DEHFGISV 372 (464)
Q Consensus 303 p~~~l~i~G~~~~~~~~--~~~~~l~~~~~----~~~l~~--~v~~~g~~~~~~~~~~l~~ad~~v~ps~--~e~~~~~~ 372 (464)
.++++++.|.+...... ...+.+.+.++ +-..++ +|.|+...+.+-...++++||+.++||. .|++|++-
T Consensus 554 ~p~q~If~GKA~P~y~~aK~iIk~i~~va~~in~dp~~~~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~ 633 (796)
T 2c4m_A 554 PARTVIFGAKAAPGYVRAKAIIKLINSIADLVNNDPEVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGTSN 633 (796)
T ss_dssp CCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTTTTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCHHH
T ss_pred CCeEEEEEecCCHhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHH
Confidence 26899999987543211 11122333333 113466 7999988888889999999999999998 99999999
Q ss_pred HHHHHhCCcEEEeCCCCCccceecccCCccceeecC-CHHHHHHHHHH------HHcCCHHHHHHHHHHHHHHHHccCHH
Q 012436 373 VEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ-NAEEYADAIVK------IISMPETERLEMAAAARRRAARFSEQ 445 (464)
Q Consensus 373 ~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~-~~~~la~~i~~------l~~~~~~~~~~~~~~~~~~~~~~s~~ 445 (464)
+-+|..|++.|++--|.. .|+.+ +.+.+|||++. +.++..+.... ... ++ ..+++.+++.. ..|||+
T Consensus 634 MKam~NGaL~iGtLDGan-vEi~e-~vG~~NgF~FG~~~~ev~~l~~~y~a~~~y~~-~~-~~~~vvd~~~~--g~fs~~ 707 (796)
T 2c4m_A 634 MKFMMNGALTLGTMDGAN-VEIVD-SVGEENAYIFGARVEELPALRESYKPYELYET-VP-GLKRALDALDN--GTLNDN 707 (796)
T ss_dssp HHHHHTTCEEEEESSTHH-HHHHH-HHCGGGSEEESCCTTTHHHHHHTCCHHHHHHH-ST-THHHHHHTTTS--SSSCCT
T ss_pred HHHHHcCCeEEeccCCeE-eehhh-hcCCCcEEEecCchhhHHHHHHhhChHHHhhc-CH-HHHHHHHHHHc--CCCCCC
Confidence 999999999998876665 45532 22357999986 33333332222 111 22 12222211111 578887
Q ss_pred HHHHHHHHHHHHHHh
Q 012436 446 RFYEDFKAAIRPILC 460 (464)
Q Consensus 446 ~~~~~~~~~~~~~~~ 460 (464)
.- ..+..+|++++.
T Consensus 708 ~~-~~y~~Ly~~L~~ 721 (796)
T 2c4m_A 708 NS-GLFYDLKHSLIH 721 (796)
T ss_dssp TC-CHHHHHHHHHHS
T ss_pred CH-HHHHHHHHHHHh
Confidence 65 668888887754
|
| >2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* | Back alignment and structure |
|---|
Probab=98.71 E-value=1.3e-05 Score=78.04 Aligned_cols=93 Identities=15% Similarity=0.047 Sum_probs=65.6
Q ss_pred CCcEEEccCCChhHHHHHHh--cCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCc---cceecccCCc-cceeecC
Q 012436 335 DGNVEFYKNLLYRDLVKLLG--GAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPK---MDIVLEEDGQ-QTGFLAQ 408 (464)
Q Consensus 335 ~~~v~~~g~~~~~~~~~~l~--~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~---~~~v~~~~~~-~~g~~~~ 408 (464)
++++.+.+++|+. ++|+ ++|++|.- +...+++||+++|+|+|+-...+.- ...+.+ . +.|...+
T Consensus 324 ~~~~~v~~w~pq~---~vL~h~~~~~fvth----~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~---~~g~g~~l~ 393 (456)
T 2c1x_A 324 RGYGMVVPWAPQA---EVLAHEAVGAFVTH----CGWNSLWESVAGGVPLICRPFFGDQRLNGRMVED---VLEIGVRIE 393 (456)
T ss_dssp TTTEEEESCCCHH---HHHTSTTEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH---TSCCEEECG
T ss_pred CCceEEecCCCHH---HHhcCCcCCEEEec----CCcchHHHHHHhCceEEecCChhhHHHHHHHHHH---HhCeEEEec
Confidence 4688999999764 5688 66777743 3456899999999999998754321 112233 3 5666553
Q ss_pred ----CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 012436 409 ----NAEEYADAIVKIISMPETERLEMAAAARRRA 439 (464)
Q Consensus 409 ----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~ 439 (464)
+.++++++|.++++ |++ .+++++++++..
T Consensus 394 ~~~~~~~~l~~~i~~ll~-~~~-~~~~r~~a~~l~ 426 (456)
T 2c1x_A 394 GGVFTKSGLMSCFDQILS-QEK-GKKLRENLRALR 426 (456)
T ss_dssp GGSCCHHHHHHHHHHHHH-SHH-HHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHC-CCc-HHHHHHHHHHHH
Confidence 79999999999998 875 456666666554
|
| >3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A* | Back alignment and structure |
|---|
Probab=98.66 E-value=2.8e-07 Score=83.00 Aligned_cols=94 Identities=14% Similarity=-0.007 Sum_probs=65.1
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHH
Q 012436 270 PAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDL 349 (464)
Q Consensus 270 ~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~ 349 (464)
.+++++|..+...-.+.+++++.. . .. -.++.|.+.. ..+++++.+++. +++.+.+++ +++
T Consensus 159 ~ILv~~GG~d~~~l~~~vl~~L~~---~-----~~-i~vv~G~~~~-----~~~~l~~~~~~~---~~v~v~~~~--~~m 219 (282)
T 3hbm_A 159 DFFICMGGTDIKNLSLQIASELPK---T-----KI-ISIATSSSNP-----NLKKLQKFAKLH---NNIRLFIDH--ENI 219 (282)
T ss_dssp EEEEECCSCCTTCHHHHHHHHSCT---T-----SC-EEEEECTTCT-----THHHHHHHHHTC---SSEEEEESC--SCH
T ss_pred eEEEEECCCchhhHHHHHHHHhhc---C-----CC-EEEEECCCch-----HHHHHHHHHhhC---CCEEEEeCH--HHH
Confidence 456678876655434444444432 1 13 3456666642 236666666542 489999999 899
Q ss_pred HHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCC
Q 012436 350 VKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNS 387 (464)
Q Consensus 350 ~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~ 387 (464)
.++|++||+.|.+ .|.++.|++++|+|.|....
T Consensus 220 ~~~m~~aDlvI~~-----gG~T~~E~~~~g~P~i~ip~ 252 (282)
T 3hbm_A 220 AKLMNESNKLIIS-----ASSLVNEALLLKANFKAICY 252 (282)
T ss_dssp HHHHHTEEEEEEE-----SSHHHHHHHHTTCCEEEECC
T ss_pred HHHHHHCCEEEEC-----CcHHHHHHHHcCCCEEEEeC
Confidence 9999999999974 25799999999999999764
|
| >3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A* | Back alignment and structure |
|---|
Probab=98.63 E-value=8.4e-05 Score=71.79 Aligned_cols=375 Identities=14% Similarity=-0.011 Sum_probs=172.7
Q ss_pred ccccccceEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeecc
Q 012436 29 ARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRR 108 (464)
Q Consensus 29 ~~~~~~mkI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (464)
|....+.+|+++-. . . -|.-.-+.+|++.|.++|..+.|+++++.. ............ ...+++..++..
T Consensus 8 M~~~~~~hvv~~P~-p-~-~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~------~~~~~~~~~~~~-~~~i~~~~ipdg 77 (454)
T 3hbf_A 8 MNGNNLLHVAVLAF-P-F-GTHAAPLLSLVKKIATEAPKVTFSFFCTTT------TNDTLFSRSNEF-LPNIKYYNVHDG 77 (454)
T ss_dssp ----CCCEEEEECC-C-S-SSSHHHHHHHHHHHHHHCTTSEEEEEECHH------HHHHSCSSSSCC-CTTEEEEECCCC
T ss_pred ccCCCCCEEEEEcC-C-c-ccHHHHHHHHHHHHHhCCCCEEEEEEeCHH------HHHhhhcccccC-CCCceEEecCCC
Confidence 55566778887632 2 2 378888899999999999777777776431 111110000000 122344444321
Q ss_pred cccccc-c-Ccceehhhhchhh----hHHHHH-Hhhh--cCCcEEEecccccccchhhhccCceEEEEeeCCcchhhhhh
Q 012436 109 KWIEES-T-YPRFTMIGQSFGS----VYLSWE-ALCK--FTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMIS 179 (464)
Q Consensus 109 ~~~~~~-~-~~~~~~~~~~~~~----~~~~~~-~l~~--~~~Dvv~~~~~~~~~~~~~~~~~~p~v~~~h~p~~~~~~~~ 179 (464)
..... . -.....+..+... +....+ ++.+ .++|.|+.-....+...+++..|+|.+.++-.+........
T Consensus 78 -lp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~ 156 (454)
T 3hbf_A 78 -LPKGYVSSGNPREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHV 156 (454)
T ss_dssp -CCTTCCCCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHH
T ss_pred -CCCCccccCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHH
Confidence 10000 0 0000011111111 111112 1222 36887774444444445899999999876542221111000
Q ss_pred c---cc--------cccccc---CCCcccccch---hhh-HHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHH--HHHH
Q 012436 180 R---VR--------EGSSMY---NNNASIAQSN---WLS-QCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSH--IEKL 239 (464)
Q Consensus 180 ~---~~--------~~~~~~---~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~--~~~~ 239 (464)
. +. ...... -+-....... +.. .........+.... ...+.++.++++|-...+. +...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~iPg~p~~~~~dlp~~~~~~~~~~~~~~~~~~~-~~~~~~~~vl~ns~~eLE~~~~~~~ 235 (454)
T 3hbf_A 157 YTDLIREKTGSKEVHDVKSIDVLPGFPELKASDLPEGVIKDIDVPFATMLHKMG-LELPRANAVAINSFATIHPLIENEL 235 (454)
T ss_dssp THHHHHHTCCHHHHTTSSCBCCSTTSCCBCGGGSCTTSSSCTTSHHHHHHHHHH-HHGGGSSCEEESSCGGGCHHHHHHH
T ss_pred hhHHHHhhcCCCccccccccccCCCCCCcChhhCchhhccCCchHHHHHHHHHH-HhhccCCEEEECChhHhCHHHHHHH
Confidence 0 00 000000 0000000000 000 00011222222222 2357899999988665432 2211
Q ss_pred hCCCCCeEEecCCC---CCCCCc-cCC-----CCCCCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEE
Q 012436 240 WGIPDRIKRVYPPC---DTSGLQ-VLP-----LERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFV 310 (464)
Q Consensus 240 ~~~~~~i~~i~~~~---d~~~~~-~~~-----~~~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~ 310 (464)
-....++..|.+-. ...... ... ....++..+++..|+.... ..+.+.+.+..+... +.+++.+
T Consensus 236 ~~~~~~v~~vGPl~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~-~~~~~~el~~~l~~~------~~~flw~ 308 (454)
T 3hbf_A 236 NSKFKLLLNVGPFNLTTPQRKVSDEHGCLEWLDQHENSSVVYISFGSVVTP-PPHELTALAESLEEC------GFPFIWS 308 (454)
T ss_dssp HTTSSCEEECCCHHHHSCCSCCCCTTCHHHHHHTSCTTCEEEEECCSSCCC-CHHHHHHHHHHHHHH------CCCEEEE
T ss_pred HhcCCCEEEECCcccccccccccchHHHHHHHhcCCCCceEEEecCCCCcC-CHHHHHHHHHHHHhC------CCeEEEE
Confidence 11123554443211 000000 000 0112344566777876543 334444444444433 4555554
Q ss_pred cCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCC
Q 012436 311 GSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGP 390 (464)
Q Consensus 311 G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~ 390 (464)
-..... ....+.+.+. .++++.+.+++|+. ++|+.+++.++-++ +.-.+++|++++|+|+|+-...+.
T Consensus 309 ~~~~~~--~~lp~~~~~~-----~~~~~~vv~w~Pq~---~vL~h~~v~~fvtH--~G~~S~~Eal~~GvP~i~~P~~~D 376 (454)
T 3hbf_A 309 FRGDPK--EKLPKGFLER-----TKTKGKIVAWAPQV---EILKHSSVGVFLTH--SGWNSVLECIVGGVPMISRPFFGD 376 (454)
T ss_dssp CCSCHH--HHSCTTHHHH-----TTTTEEEESSCCHH---HHHHSTTEEEEEEC--CCHHHHHHHHHHTCCEEECCCSTT
T ss_pred eCCcch--hcCCHhHHhh-----cCCceEEEeeCCHH---HHHhhcCcCeEEec--CCcchHHHHHHcCCCEecCccccc
Confidence 332210 0000111111 24688889999763 67888995443322 335689999999999999875432
Q ss_pred c---cceecccCCc-cceeecC----CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 012436 391 K---MDIVLEEDGQ-QTGFLAQ----NAEEYADAIVKIISMPETERLEMAAAARRRA 439 (464)
Q Consensus 391 ~---~~~v~~~~~~-~~g~~~~----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~ 439 (464)
- ...+.+ . +.|...+ +.+++.++|.++++ ++ ..+++++++++..
T Consensus 377 Q~~Na~~v~~---~~g~Gv~l~~~~~~~~~l~~av~~ll~-~~-~~~~~r~~a~~l~ 428 (454)
T 3hbf_A 377 QGLNTILTES---VLEIGVGVDNGVLTKESIKKALELTMS-SE-KGGIMRQKIVKLK 428 (454)
T ss_dssp HHHHHHHHHT---TSCSEEECGGGSCCHHHHHHHHHHHHS-SH-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHH---hhCeeEEecCCCCCHHHHHHHHHHHHC-CC-hHHHHHHHHHHHH
Confidence 0 112222 2 5665553 89999999999998 74 3345555555443
|
| >2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 | Back alignment and structure |
|---|
Probab=98.59 E-value=4.3e-05 Score=75.02 Aligned_cols=148 Identities=12% Similarity=-0.025 Sum_probs=88.6
Q ss_pred CCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCC--CccHHHHHHHHHHHHhcCCCCcEEEccCCC
Q 012436 268 EYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRN--KSDEERLQSLKDKSIELKVDGNVEFYKNLL 345 (464)
Q Consensus 268 ~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~--~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~ 345 (464)
+..+++..|+... ...+.+.+.+..+... +.+++++-.... .+.....+.+.+.. ++++.+.+++|
T Consensus 295 ~~vv~vs~GS~~~-~~~~~~~~~~~~l~~~------~~~~l~~~~~~~~~~~~~~l~~~~~~~~-----~~~~~v~~~~p 362 (482)
T 2pq6_A 295 GSVVYVNFGSTTV-MTPEQLLEFAWGLANC------KKSFLWIIRPDLVIGGSVIFSSEFTNEI-----ADRGLIASWCP 362 (482)
T ss_dssp TCEEEEECCSSSC-CCHHHHHHHHHHHHHT------TCEEEEECCGGGSTTTGGGSCHHHHHHH-----TTTEEEESCCC
T ss_pred CceEEEecCCccc-CCHHHHHHHHHHHHhc------CCcEEEEEcCCccccccccCcHhHHHhc-----CCCEEEEeecC
Confidence 3456667777643 2344444444444332 566666543210 00000112222222 46899999997
Q ss_pred hhHHHHHHhcCcE--EEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCcc---c-eecccCCccceeecC---CHHHHHHH
Q 012436 346 YRDLVKLLGGAVV--GIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKM---D-IVLEEDGQQTGFLAQ---NAEEYADA 416 (464)
Q Consensus 346 ~~~~~~~l~~ad~--~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~---~-~v~~~~~~~~g~~~~---~~~~la~~ 416 (464)
+. ++|+.+++ +|. -+...+++||+++|+|+|+-...+.-. . ++.. .+.|+..+ +.+++.++
T Consensus 363 q~---~~L~h~~~~~~vt----h~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~---~G~g~~l~~~~~~~~l~~~ 432 (482)
T 2pq6_A 363 QD---KVLNHPSIGGFLT----HCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNE---WEIGMEIDTNVKREELAKL 432 (482)
T ss_dssp HH---HHHTSTTEEEEEE----CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHT---SCCEEECCSSCCHHHHHHH
T ss_pred HH---HHhcCCCCCEEEe----cCCcchHHHHHHcCCCEEecCcccchHHHHHHHHHH---hCEEEEECCCCCHHHHHHH
Confidence 65 47877666 552 244568999999999999987653311 1 1223 45666554 89999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHHH
Q 012436 417 IVKIISMPETERLEMAAAARRRA 439 (464)
Q Consensus 417 i~~l~~~~~~~~~~~~~~~~~~~ 439 (464)
|.++++ |++ .+++++++++..
T Consensus 433 i~~ll~-~~~-~~~~r~~a~~l~ 453 (482)
T 2pq6_A 433 INEVIA-GDK-GKKMKQKAMELK 453 (482)
T ss_dssp HHHHHT-SHH-HHHHHHHHHHHH
T ss_pred HHHHHc-CCc-HHHHHHHHHHHH
Confidence 999998 886 456777776655
|
| >2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* | Back alignment and structure |
|---|
Probab=98.51 E-value=0.0005 Score=66.98 Aligned_cols=133 Identities=12% Similarity=-0.040 Sum_probs=76.6
Q ss_pred CCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChh
Q 012436 268 EYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYR 347 (464)
Q Consensus 268 ~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~ 347 (464)
+..+++..|+....-+.+.+.+++..+... +.+++++-+..... ..+.+.+.... .+++.+.+++|+.
T Consensus 276 ~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~------~~~~l~~~~~~~~~---l~~~~~~~~~~---~~~~~v~~w~pq~ 343 (463)
T 2acv_A 276 KSVVFLCFGSMGVSFGPSQIREIALGLKHS------GVRFLWSNSAEKKV---FPEGFLEWMEL---EGKGMICGWAPQV 343 (463)
T ss_dssp TCEEEEECCSSCCCCCHHHHHHHHHHHHHH------TCEEEEECCCCGGG---SCTTHHHHHHH---HCSEEEESSCCHH
T ss_pred CceEEEEeccccccCCHHHHHHHHHHHHhC------CCcEEEEECCCccc---CChhHHHhhcc---CCCEEEEccCCHH
Confidence 345667777765222334444444444332 55665554321000 00112211100 2478888999765
Q ss_pred HHHHHHh--cCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCc---cce-ecccCCccceeec---------C-CHH
Q 012436 348 DLVKLLG--GAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPK---MDI-VLEEDGQQTGFLA---------Q-NAE 411 (464)
Q Consensus 348 ~~~~~l~--~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~---~~~-v~~~~~~~~g~~~---------~-~~~ 411 (464)
++|+ ++|++|.- +...+++||+++|+|+|+-...+.- ... +.. .+.|+.. . +.+
T Consensus 344 ---~vL~h~~~~~fvth----~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~---~g~g~~l~~~~~~~~~~~~~~ 413 (463)
T 2acv_A 344 ---EVLAHKAIGGFVSH----CGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKE---WGVGLGLRVDYRKGSDVVAAE 413 (463)
T ss_dssp ---HHHHSTTEEEEEEC----CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHT---SCCEEESCSSCCTTCCCCCHH
T ss_pred ---HHhCCCccCeEEec----CCchhHHHHHHcCCCeeeccchhhhHHHHHHHHHH---cCeEEEEecccCCCCccccHH
Confidence 4576 67777743 3457899999999999998764321 112 233 4666554 2 789
Q ss_pred HHHHHHHHHHc
Q 012436 412 EYADAIVKIIS 422 (464)
Q Consensus 412 ~la~~i~~l~~ 422 (464)
++.++|.++++
T Consensus 414 ~l~~ai~~ll~ 424 (463)
T 2acv_A 414 EIEKGLKDLMD 424 (463)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHHHh
Confidence 99999999986
|
| >2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* | Back alignment and structure |
|---|
Probab=98.28 E-value=0.0013 Score=64.22 Aligned_cols=92 Identities=13% Similarity=0.001 Sum_probs=58.6
Q ss_pred EEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCc---cce-ecccCCccceeec------
Q 012436 338 VEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPK---MDI-VLEEDGQQTGFLA------ 407 (464)
Q Consensus 338 v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~---~~~-v~~~~~~~~g~~~------ 407 (464)
+.+.+++|+. ++|+.+++.++-+ -+.-.+++||+++|+|+|+-...+.- ... +.. -+.|...
T Consensus 341 ~~v~~w~Pq~---~vL~h~~v~~fvt--HgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~---~G~g~~l~~~~~~ 412 (480)
T 2vch_A 341 FVIPFWAPQA---QVLAHPSTGGFLT--HCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSED---IRAALRPRAGDDG 412 (480)
T ss_dssp EEEESCCCHH---HHHHSTTEEEEEE--CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHT---TCCEECCCCCTTS
T ss_pred EEEeCccCHH---HHhCCCCcCeEEe--cccchhHHHHHHcCCCEEeccccccchHHHHHHHHH---hCeEEEeecccCC
Confidence 4555799764 6799888633332 23356899999999999998754320 111 223 3555443
Q ss_pred C-CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 012436 408 Q-NAEEYADAIVKIISMPETERLEMAAAARRRA 439 (464)
Q Consensus 408 ~-~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~ 439 (464)
. +.++++++|.++++ +. .-.++++++++..
T Consensus 413 ~~~~~~l~~av~~vl~-~~-~~~~~r~~a~~l~ 443 (480)
T 2vch_A 413 LVRREEVARVVKGLME-GE-EGKGVRNKMKELK 443 (480)
T ss_dssp CCCHHHHHHHHHHHHT-ST-HHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHhc-Cc-chHHHHHHHHHHH
Confidence 2 78999999999996 54 3334555555443
|
| >1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7 | Back alignment and structure |
|---|
Probab=98.12 E-value=0.00014 Score=68.07 Aligned_cols=100 Identities=12% Similarity=0.016 Sum_probs=65.7
Q ss_pred CcEEEEEec-cCCCCCh--HHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcC--C-CCcEEEcc
Q 012436 269 YPAIISVAQ-FRPEKAH--PLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELK--V-DGNVEFYK 342 (464)
Q Consensus 269 ~~~i~~~G~-~~~~K~~--~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~--l-~~~v~~~g 342 (464)
+.+++..|. ..+.|.. +.+.++++.+.++ ++++++.|...+ . +..++..+..+ . ...+.+.|
T Consensus 181 ~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~------~~~vvl~g~~~e---~---~~~~~i~~~~~~~~~~~~~~l~g 248 (348)
T 1psw_A 181 PMIGFCPGAEFGPAKRWPHYHYAELAKQLIDE------GYQVVLFGSAKD---H---EAGNEILAALNTEQQAWCRNLAG 248 (348)
T ss_dssp CEEEEECCCTTCGGGSCCHHHHHHHHHHHHHT------TCEEEECCCGGG---H---HHHHHHHTTSCHHHHTTEEECTT
T ss_pred cEEEEECCCCccccCCCCHHHHHHHHHHHHHC------CCeEEEEeChhh---H---HHHHHHHHhhhhccccceEeccC
Confidence 356666676 4455554 4788888877664 678888886532 1 22222322221 0 12356789
Q ss_pred CCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEe
Q 012436 343 NLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAH 385 (464)
Q Consensus 343 ~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~ 385 (464)
..+-.|+..+++.||++|... + | .+-.|.++|+|+|+-
T Consensus 249 ~~sl~e~~ali~~a~l~I~~D---s-g-~~HlAaa~g~P~v~l 286 (348)
T 1psw_A 249 ETQLDQAVILIAACKAIVTND---S-G-LMHVAAALNRPLVAL 286 (348)
T ss_dssp TSCHHHHHHHHHTSSEEEEES---S-H-HHHHHHHTTCCEEEE
T ss_pred cCCHHHHHHHHHhCCEEEecC---C-H-HHHHHHHcCCCEEEE
Confidence 888999999999999999763 2 2 343499999999984
|
| >2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A* | Back alignment and structure |
|---|
Probab=98.11 E-value=0.00047 Score=63.83 Aligned_cols=135 Identities=15% Similarity=0.089 Sum_probs=79.3
Q ss_pred CCcEEEEEeccCCCCCh--HHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCC
Q 012436 268 EYPAIISVAQFRPEKAH--PLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLL 345 (464)
Q Consensus 268 ~~~~i~~~G~~~~~K~~--~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~ 345 (464)
++.+.+..|.-.+.|.. +.+.+.++.+.+ .++++++.++++. + .+..++..+.. +++.+.|..+
T Consensus 178 ~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~------~~~~vvl~~g~~~--e---~~~~~~i~~~~---~~~~l~g~~s 243 (326)
T 2gt1_A 178 GEYAVFLHATTRDDKHWPEEHWRELIGLLAD------SGIRIKLPWGAPH--E---EERAKRLAEGF---AYVEVLPKMS 243 (326)
T ss_dssp TSEEEEECCCSSGGGSCCHHHHHHHHHHTTT------TCCEEEECCSSHH--H---HHHHHHHHTTC---TTEEECCCCC
T ss_pred CCEEEEEeCCCCccccCCHHHHHHHHHHHHH------CCCcEEEecCCHH--H---HHHHHHHHhhC---CcccccCCCC
Confidence 33556666765555654 466666666643 2678888743331 1 12233333322 2467889889
Q ss_pred hhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCC------ccceeecC-CHHHHHHHHH
Q 012436 346 YRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDG------QQTGFLAQ-NAEEYADAIV 418 (464)
Q Consensus 346 ~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~------~~~g~~~~-~~~~la~~i~ 418 (464)
-.|+..+++.||++|.. ++ |..=+ |.|+|+|+|+--.... +........ +....+.+ +++++.+++.
T Consensus 244 l~el~ali~~a~l~I~~---DS-G~~Hl-Aaa~g~P~v~lfg~t~-p~~~~P~~~~~~~~~~~~~cm~~I~~~~V~~~i~ 317 (326)
T 2gt1_A 244 LEGVARVLAGAKFVVSV---DT-GLSHL-TAALDRPNITVYGPTD-PGLIGGYGKNQMVCRAPGNELSQLTANAVKQFIE 317 (326)
T ss_dssp HHHHHHHHHTCSEEEEE---SS-HHHHH-HHHTTCCEEEEESSSC-HHHHCCCSSSEEEEECGGGCGGGCCHHHHHHHHH
T ss_pred HHHHHHHHHhCCEEEec---CC-cHHHH-HHHcCCCEEEEECCCC-hhhcCCCCCCceEecCCcccccCCCHHHHHHHHH
Confidence 99999999999999976 33 33334 7779999998521111 111111000 11122233 8999999998
Q ss_pred HHHc
Q 012436 419 KIIS 422 (464)
Q Consensus 419 ~l~~ 422 (464)
++++
T Consensus 318 ~~l~ 321 (326)
T 2gt1_A 318 ENAE 321 (326)
T ss_dssp HTTT
T ss_pred HHHH
Confidence 8886
|
| >3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* | Back alignment and structure |
|---|
Probab=98.08 E-value=0.00011 Score=76.14 Aligned_cols=208 Identities=11% Similarity=0.055 Sum_probs=115.4
Q ss_pred hhcCCEEEEcCHHHHHHHHHHhCCC-CCeEEecCCCCCC--CCccC-----------CCCCCCCCcEEEEEeccCCCC--
Q 012436 219 GSCADLAMVNSSWTQSHIEKLWGIP-DRIKRVYPPCDTS--GLQVL-----------PLERSTEYPAIISVAQFRPEK-- 282 (464)
Q Consensus 219 ~~~ad~vi~~S~~~~~~~~~~~~~~-~~i~~i~~~~d~~--~~~~~-----------~~~~~~~~~~i~~~G~~~~~K-- 282 (464)
.+..|.+++.|+...+.+.+.++.. .++ +..|..-. .+... .....+++++|+|+-++....
T Consensus 476 ~~~~D~~~~~s~~~~~~~~~~f~~~~~~i--~~~G~PR~D~l~~~~~~~~~~~~~~~~~~~~~~kk~ILyaPT~r~~~~~ 553 (729)
T 3l7i_A 476 TSRWDYLISPNRYSTEIFRSAFWMDEERI--LEIGYPRNDVLVNRANDQEYLDEIRTHLNLPSDKKVIMYAPTWRDDEFV 553 (729)
T ss_dssp HTTCSEEEESSHHHHHHHHHHTCCCGGGE--EESCCGGGHHHHHSTTCHHHHHHHHHHTTCCSSCEEEEECCCCCGGGCC
T ss_pred hccCCEEEeCCHHHHHHHHHHhCCCcceE--EEcCCCchHHHhcccchHHHHHHHHHHhCCCCCCeEEEEeeeeeCCccc
Confidence 4788999999999999999998874 455 44443211 11000 011235678999998776531
Q ss_pred --C-----hHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHHHhc
Q 012436 283 --A-----HPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGG 355 (464)
Q Consensus 283 --~-----~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ 355 (464)
+ ...-++.+.+... +++.+++-... .+.......+..+.+.-.... .++.++|..
T Consensus 554 ~~~~~~~~~~~~~~~l~~~l~------~~~~li~r~Hp----------~~~~~~~~~~~~~~~~~~~~~--~di~~ll~~ 615 (729)
T 3l7i_A 554 SKGKYLFELKIDLDNLYKELG------DDYVILLRMHY----------LISNALDLSGYENFAIDVSNY--NDVSELFLI 615 (729)
T ss_dssp GGGSSCCCCTTCHHHHHHHHT------TTEEEEECCCH----------HHHTTCCCTTCTTTEEECTTC--SCHHHHHHT
T ss_pred cccccccchhhHHHHHHHHcC------CCeEEEEecCc----------chhccccccccCCcEEeCCCC--cCHHHHHHH
Confidence 1 1112233332221 26666664431 111111111223444444433 689999999
Q ss_pred CcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCC---------CCccceecccCCccceeecCCHHHHHHHHHHHHcCCHH
Q 012436 356 AVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSA---------GPKMDIVLEEDGQQTGFLAQNAEEYADAIVKIISMPET 426 (464)
Q Consensus 356 ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~---------~~~~~~v~~~~~~~~g~~~~~~~~la~~i~~l~~~~~~ 426 (464)
||++|. .++-+++|++..++|||..... |...++ .+ ..-|-++.+.+++.++|..... .++
T Consensus 616 aD~lIT-----DySSv~fD~~~l~kPiif~~~D~~~Y~~~~rg~y~d~-~~---~~pg~~~~~~~eL~~~i~~~~~-~~~ 685 (729)
T 3l7i_A 616 SDCLIT-----DYSSVMFDYGILKRPQFFFAYDIDKYDKGLRGFYMNY-ME---DLPGPIYTEPYGLAKELKNLDK-VQQ 685 (729)
T ss_dssp CSEEEE-----SSCTHHHHHGGGCCCEEEECTTTTTTTSSCCSBSSCT-TS---SSSSCEESSHHHHHHHHTTHHH-HHH
T ss_pred hCEEEe-----echHHHHhHHhhCCCEEEecCCHHHHhhccCCcccCh-hH---hCCCCeECCHHHHHHHHhhhhc-cch
Confidence 999983 4677999999999999987322 111111 11 2345566699999999987765 443
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q 012436 427 ERLEMAAAARRRAARFSEQRFYEDFKAAIR 456 (464)
Q Consensus 427 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 456 (464)
...+..+.-++..-.|+-.+.++++.+.+-
T Consensus 686 ~~~~~~~~~~~~~~~~~dg~as~ri~~~i~ 715 (729)
T 3l7i_A 686 QYQEKIDAFYDRFCSVDNGKASQYIGDLIH 715 (729)
T ss_dssp HTHHHHHHHHHHHSTTCCSCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCccCChHHHHHHHHHH
Confidence 333322222222212333345555555443
|
| >3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula} | Back alignment and structure |
|---|
Probab=97.99 E-value=0.00044 Score=64.64 Aligned_cols=100 Identities=12% Similarity=0.034 Sum_probs=68.2
Q ss_pred CcEEEEEeccCCCCC--hHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCCh
Q 012436 269 YPAIISVAQFRPEKA--HPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLY 346 (464)
Q Consensus 269 ~~~i~~~G~~~~~K~--~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~ 346 (464)
+.+.+..|.-.+.|. .+.+.+.++.+.++ +.++++.|+..+. +..++..+..+ ...+.+.|..+-
T Consensus 186 ~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~------g~~vvl~g~~~e~------~~~~~i~~~~~-~~~~~l~g~~sl 252 (349)
T 3tov_A 186 ILIGFNIGSAVPEKRWPAERFAHVADYFGRL------GYKTVFFGGPMDL------EMVQPVVEQME-TKPIVATGKFQL 252 (349)
T ss_dssp CEEEEECCCSSGGGCCCHHHHHHHHHHHHHH------TCEEEECCCTTTH------HHHHHHHHTCS-SCCEECTTCCCH
T ss_pred CEEEEeCCCCCccCCCCHHHHHHHHHHHHhC------CCeEEEEeCcchH------HHHHHHHHhcc-cccEEeeCCCCH
Confidence 345566676555554 46778888877765 5788888865432 33344444443 234777899999
Q ss_pred hHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeC
Q 012436 347 RDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHN 386 (464)
Q Consensus 347 ~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~ 386 (464)
.|+..+++.||++|.+ ++ |..-+ |.++|+|+|+--
T Consensus 253 ~e~~ali~~a~~~i~~---Ds-G~~Hl-Aaa~g~P~v~lf 287 (349)
T 3tov_A 253 GPLAAAMNRCNLLITN---DS-GPMHV-GISQGVPIVALY 287 (349)
T ss_dssp HHHHHHHHTCSEEEEE---SS-HHHHH-HHTTTCCEEEEC
T ss_pred HHHHHHHHhCCEEEEC---CC-CHHHH-HHhcCCCEEEEE
Confidence 9999999999999976 33 33334 899999999964
|
| >2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0022 Score=55.12 Aligned_cols=74 Identities=8% Similarity=-0.109 Sum_probs=52.2
Q ss_pred cEEEccCCChhHHHHHHh-cCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccc-------eecccCCccceeecC
Q 012436 337 NVEFYKNLLYRDLVKLLG-GAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMD-------IVLEEDGQQTGFLAQ 408 (464)
Q Consensus 337 ~v~~~g~~~~~~~~~~l~-~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~-------~v~~~~~~~~g~~~~ 408 (464)
++...+++ +++.++|+ .||++|.- +...+++|++++|+|.|.-.......+ .+.+ .+.++..
T Consensus 115 ~v~v~~f~--~~m~~~l~~~AdlvIsh----aGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~---~G~~~~~- 184 (224)
T 2jzc_A 115 KVIGFDFS--TKMQSIIRDYSDLVISH----AGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVE---LGYVWSC- 184 (224)
T ss_dssp EEEECCSS--SSHHHHHHHHCSCEEES----SCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHH---HSCCCEE-
T ss_pred eEEEeecc--chHHHHHHhcCCEEEEC----CcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHH---CCCEEEc-
Confidence 56677888 89999999 99999954 446789999999999999775432111 1222 2334433
Q ss_pred CHHHHHHHHHHH
Q 012436 409 NAEEYADAIVKI 420 (464)
Q Consensus 409 ~~~~la~~i~~l 420 (464)
++++++++|.++
T Consensus 185 ~~~~L~~~i~~l 196 (224)
T 2jzc_A 185 APTETGLIAGLR 196 (224)
T ss_dssp CSCTTTHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 677788888776
|
| >3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=90.15 E-value=9.9 Score=33.94 Aligned_cols=157 Identities=11% Similarity=-0.020 Sum_probs=82.5
Q ss_pred HHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCccCCCCCCCCCcEEEEEeccCCCCChHHHHHHHHHHH
Q 012436 216 GLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKAHPLQLEAFSVAL 295 (464)
Q Consensus 216 ~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~ 295 (464)
+..-...|.|++.+....+.+.... .++-++..++..................+..+. ..-.++..++.+.++.
T Consensus 64 ~l~~~~~DlIiai~t~aa~a~~~~~---~~iPVVf~~v~dp~~~~l~~~~~~~g~nvtGv~---~~~~~~~~l~l~~~l~ 137 (302)
T 3lkv_A 64 QFVGENPDVLVGIATPTAQALVSAT---KTIPIVFTAVTDPVGAKLVKQLEQPGKNVTGLS---DLSPVEQHVELIKEIL 137 (302)
T ss_dssp HHHTTCCSEEEEESHHHHHHHHHHC---SSSCEEEEEESCTTTTTSCSCSSSCCSSEEEEE---CCCCHHHHHHHHHHHS
T ss_pred HHHhcCCcEEEEcCCHHHHHHHhhc---CCCCeEEEecCCcchhhhcccccCCCCcEEEEE---CCcCHHHHHHHHHHhC
Confidence 4445789999999888887776653 233334333322111111111111112333332 2223566677776664
Q ss_pred HHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHH----HhcCcEEEEcCCCC---CC
Q 012436 296 RKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKL----LGGAVVGIHSMIDE---HF 368 (464)
Q Consensus 296 ~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~----l~~ad~~v~ps~~e---~~ 368 (464)
.. --++.++++..+.......+.+++.++++|+. +......+..++.+. ....|+++.+.... ..
T Consensus 138 P~------~k~vgvi~~~~~~~s~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~~~l~~~~d~i~~~~d~~~~~~~ 209 (302)
T 3lkv_A 138 PN------VKSIGVVYNPGEANAVSLMELLKLSAAKHGIK--LVEATALKSADVQSATQAIAEKSDVIYALIDNTVASAI 209 (302)
T ss_dssp TT------CCEEEEEECTTCHHHHHHHHHHHHHHHHTTCE--EEEEECSSGGGHHHHHHHHHTTCSEEEECSCHHHHHTH
T ss_pred CC------CCEEEEEeCCCcccHHHHHHHHHHHHHHcCCE--EEEEecCChHHHHHHHHhccCCeeEEEEeCCcchhhHH
Confidence 32 22565666544433334557788888888763 444443344444444 45688877764211 11
Q ss_pred ChHHHHHHHhCCcEEEeC
Q 012436 369 GISVVEYMAAGAIPIAHN 386 (464)
Q Consensus 369 ~~~~~Ea~a~G~PvI~~~ 386 (464)
.....-+...++|+++..
T Consensus 210 ~~i~~~~~~~~iPv~~~~ 227 (302)
T 3lkv_A 210 EGMIVAANQAKTPVFGAA 227 (302)
T ss_dssp HHHHHHHHHTTCCEEESS
T ss_pred HHHHHHHhhcCCceeecc
Confidence 122344667899999865
|
| >1xv5_A AGT, DNA alpha-glucosyltransferase; HET: DNA CME UDP; 1.73A {Enterobacteria phage T4} PDB: 1y6f_A* 1y6g_A* 1ya6_A* 1y8z_A* | Back alignment and structure |
|---|
Probab=87.07 E-value=12 Score=30.95 Aligned_cols=163 Identities=12% Similarity=0.091 Sum_probs=102.1
Q ss_pred EEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCC---------------C
Q 012436 272 IISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVD---------------G 336 (464)
Q Consensus 272 i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~---------------~ 336 (464)
=-++||-..+||+-.+.+.-+++.+-. .-.-++-|-... ..+. .+++.|++ +
T Consensus 200 nrwigrtttwkgfyqmfdfhekflkpa-----gkstvmeglers-------pafi-aikekgipyeyygnreidkmnlap 266 (401)
T 1xv5_A 200 NRWIGRTTTWKGFYQMFDFHEKFLKPA-----GKSTVMEGLERS-------PAFI-AIKEKGIPYEYYGNREIDKMNLAP 266 (401)
T ss_dssp EEEECCSCGGGCHHHHHHHHHHTTTTT-----TCEEEEECCCCS-------HHHH-HHHHTTCCEEEECGGGGGGCCCSS
T ss_pred hhhhcccchhHhHHHHhhHHHHhcCcc-----chhhhhhhhhcC-------CceE-EEcccCCchhhcCcchhhhhcCCC
Confidence 358899999999999998887765532 223344443321 1111 12333333 2
Q ss_pred c--EEEccCCChhHHHHHHhcCcEEEEcCC------CCCCChHHHHHHHhCCcEEEeCCCCC-c------cceecccCCc
Q 012436 337 N--VEFYKNLLYRDLVKLLGGAVVGIHSMI------DEHFGISVVEYMAAGAIPIAHNSAGP-K------MDIVLEEDGQ 401 (464)
Q Consensus 337 ~--v~~~g~~~~~~~~~~l~~ad~~v~ps~------~e~~~~~~~Ea~a~G~PvI~~~~~~~-~------~~~v~~~~~~ 401 (464)
| ..++.-.-..|+.+-++.+.+....|. ....-.+-+|--|||+-.+--...|. . .-+.. .
T Consensus 267 nqpaqildcyinsemlermsksgfgyqlsklnqkylqrsleythlelgacgtipvfwkstgenlkfrvdntplts----h 342 (401)
T 1xv5_A 267 NQPAQILDCYINSEMLERMSKSGFGYQLSKLNQKYLQRSLEYTHLELGACGTIPVFWKSTGENLKFRVDNTPLTS----H 342 (401)
T ss_dssp SCCEEEESCCCHHHHHHHHHTEEEEEECCCCCGGGCSSCCCHHHHHHHHHTSEEEEEHHHHHHSBCTTTCCBGGG----S
T ss_pred CCcchhhhheecHHHHHHhhhcCcccchHHHHHHHHHhhhhhheeecccccceeeeecccCcceEEEecCCcccc----c
Confidence 1 233333445788899999988877663 33566778999999996664321111 0 01112 2
Q ss_pred cceee-cC--CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-HccCHHHHHHHHH
Q 012436 402 QTGFL-AQ--NAEEYADAIVKIISMPETERLEMAAAARRRA-ARFSEQRFYEDFK 452 (464)
Q Consensus 402 ~~g~~-~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~ 452 (464)
..|++ ++ |.+.--+.|.++.. |...+.+-.+.+.+++ ++-+..-+.+.-.
T Consensus 343 dsgiiwfdendmestferikelss-dralydrerekayeflyqhqdssfcfkeqf 396 (401)
T 1xv5_A 343 DSGIIWFDENDMESTFERIKELSS-DRALYDREREKAYEFLYQHQDSSFCFKEQF 396 (401)
T ss_dssp CCSCEEECTTCHHHHHHHHHHHHT-CHHHHHHHHHHHHHHHHHHHBHHHHHHHHH
T ss_pred CCceEEecCCchHHHHHHHHHhcc-chhhhhHHHHHHHHHHHhcccccchhHhhc
Confidence 44532 33 89999999999999 9999999999999988 6655555444433
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=82.24 E-value=36 Score=32.52 Aligned_cols=107 Identities=18% Similarity=0.141 Sum_probs=58.7
Q ss_pred EEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCcc--------------HHHHHHHHHHHHhcCCCC
Q 012436 271 AIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSD--------------EERLQSLKDKSIELKVDG 336 (464)
Q Consensus 271 ~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~--------------~~~~~~l~~~~~~~~l~~ 336 (464)
.+.++|. .++++.+.+.+....+ +.-+++|+|+|.-... +.-.+..+.+++++ ++
T Consensus 211 ~v~~i~~---~~~i~~~~~~~g~~~~------~~~~v~I~GgG~ig~~lA~~L~~~~~v~iIE~d~~r~~~la~~l--~~ 279 (461)
T 4g65_A 211 EVFFVAA---SNHIRSVMSELQRLEK------PYRRIMIVGGGNIGASLAKRLEQTYSVKLIERNLQRAEKLSEEL--EN 279 (461)
T ss_dssp EEEEEEE---TTTHHHHHHHTTGGGS------CCCEEEEECCSHHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHC--TT
T ss_pred EEEEEec---cchHHHHHHhhccccc------cccEEEEEcchHHHHHHHHHhhhcCceEEEecCHHHHHHHHHHC--CC
Confidence 3444543 3455665555543211 2447888888732100 00113344445554 34
Q ss_pred cEEEccCCChhHHHH--HHhcCcEEEEcCCCC-CCChHHHHHHHhCCcEEEeCCC
Q 012436 337 NVEFYKNLLYRDLVK--LLGGAVVGIHSMIDE-HFGISVVEYMAAGAIPIAHNSA 388 (464)
Q Consensus 337 ~v~~~g~~~~~~~~~--~l~~ad~~v~ps~~e-~~~~~~~Ea~a~G~PvI~~~~~ 388 (464)
-+.+.|.-.+.++.. =+..+|+++..+..+ .-=++.+-|-.+|.+-+.+...
T Consensus 280 ~~Vi~GD~td~~~L~ee~i~~~D~~ia~T~~De~Ni~~~llAk~~gv~kvIa~vn 334 (461)
T 4g65_A 280 TIVFCGDAADQELLTEENIDQVDVFIALTNEDETNIMSAMLAKRMGAKKVMVLIQ 334 (461)
T ss_dssp SEEEESCTTCHHHHHHTTGGGCSEEEECCSCHHHHHHHHHHHHHTTCSEEEEECS
T ss_pred ceEEeccccchhhHhhcCchhhcEEEEcccCcHHHHHHHHHHHHcCCcccccccc
Confidence 566778776666554 357899988775433 2223456677889887776544
|
| >3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0 | Back alignment and structure |
|---|
Probab=80.70 E-value=4.9 Score=34.91 Aligned_cols=43 Identities=9% Similarity=0.003 Sum_probs=27.0
Q ss_pred ccccccceEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCC
Q 012436 29 ARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHD 78 (464)
Q Consensus 29 ~~~~~~mkI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~ 78 (464)
|.++++|||++.....- ...-+..|+++|.+ + ++|++..+..+
T Consensus 6 ~~~~~~m~ILlTNDDGi----~apGi~aL~~~l~~-~--~~V~VVAP~~~ 48 (261)
T 3ty2_A 6 KTATPKLRLLLSNDDGV----YAKGLAILAKTLAD-L--GEVDVVAPDRN 48 (261)
T ss_dssp -----CCEEEEECSSCT----TCHHHHHHHHHHTT-T--SEEEEEEESSC
T ss_pred hccCCCCeEEEEcCCCC----CCHHHHHHHHHHHh-c--CCEEEEecCCC
Confidence 45677799999876532 34457788899988 5 46777777653
|
| >3miz_A Putative transcriptional regulator protein, LACI family; LACL family, protein structure initiative II (PSI II), NYSGXRC, structural genomics; 1.91A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=80.62 E-value=26 Score=30.79 Aligned_cols=45 Identities=4% Similarity=0.011 Sum_probs=28.9
Q ss_pred cccccccceEEEecCCCCCCCCcc-hhhHHHHHHhhhhCCCCceEEEcc
Q 012436 28 NARRNRTTSVAFFHPNTNDGGGGE-RVLWCAVKAIQEESPDLDCIVYTG 75 (464)
Q Consensus 28 ~~~~~~~mkI~~~~~~~~~~GG~~-~~~~~l~~~L~~~g~~~~v~~~~~ 75 (464)
..++.+..+|+++.+..... -.. .++..+.+++.+.| +++.++..
T Consensus 7 ~L~~~~s~~Igvi~~~~~~~-~~~~~~~~gi~~~a~~~g--~~~~~~~~ 52 (301)
T 3miz_A 7 LIRSSRSNTFGIITDYVSTT-PYSVDIVRGIQDWANANG--KTILIANT 52 (301)
T ss_dssp -----CCCEEEEEESSTTTC-CSCHHHHHHHHHHHHHTT--CEEEEEEC
T ss_pred HHhhCCCCEEEEEeCCCcCc-ccHHHHHHHHHHHHHHCC--CEEEEEeC
Confidence 34556678899998877544 355 67777788888888 66666553
|
| >1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1 | Back alignment and structure |
|---|
Probab=80.18 E-value=15 Score=27.49 Aligned_cols=109 Identities=8% Similarity=0.056 Sum_probs=66.0
Q ss_pred CcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHHHhc---------CcEEEEcCC-CCCCChHHH
Q 012436 304 RPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGG---------AVVGIHSMI-DEHFGISVV 373 (464)
Q Consensus 304 ~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~---------ad~~v~ps~-~e~~~~~~~ 373 (464)
+.+++++.+.+ ...+.+++..++.|....+...... ++..+.+.. .|++++-.. .+.-|..++
T Consensus 2 ~~~ilivdd~~-----~~~~~l~~~L~~~~~~~~v~~~~~~--~~a~~~l~~~~~~~~~~~~dlvi~d~~~~~~~g~~~~ 74 (140)
T 1k68_A 2 HKKIFLVEDNK-----ADIRLIQEALANSTVPHEVVTVRDG--MEAMAYLRQEGEYANASRPDLILLXLNLPKKDGREVL 74 (140)
T ss_dssp CCEEEEECCCH-----HHHHHHHHHHHTCSSCCEEEEECSH--HHHHHHHTTCGGGGSCCCCSEEEECSSCSSSCHHHHH
T ss_pred CCeEEEEeCCH-----HHHHHHHHHHHhcCCCceEEEECCH--HHHHHHHHcccccccCCCCcEEEEecCCCcccHHHHH
Confidence 45677777543 4557777777776643245544443 777777764 688776543 344456666
Q ss_pred HHHH-----hCCcEEEeCCCCCccc---eecccCCccceeecC--CHHHHHHHHHHHHc
Q 012436 374 EYMA-----AGAIPIAHNSAGPKMD---IVLEEDGQQTGFLAQ--NAEEYADAIVKIIS 422 (464)
Q Consensus 374 Ea~a-----~G~PvI~~~~~~~~~~---~v~~~~~~~~g~~~~--~~~~la~~i~~l~~ 422 (464)
+.+. .++|+|.-........ .... |..+++.. +.+++.++|..++.
T Consensus 75 ~~l~~~~~~~~~pii~ls~~~~~~~~~~~~~~---g~~~~l~kP~~~~~l~~~i~~~~~ 130 (140)
T 1k68_A 75 AEIKSDPTLKRIPVVVLSTSINEDDIFHSYDL---HVNCYITKSANLSQLFQIVKGIEE 130 (140)
T ss_dssp HHHHHSTTGGGSCEEEEESCCCHHHHHHHHHT---TCSEEEECCSSHHHHHHHHHHHHH
T ss_pred HHHHcCcccccccEEEEecCCcHHHHHHHHHh---chhheecCCCCHHHHHHHHHHHHH
Confidence 6664 3577776432222122 2223 55677664 99999999988875
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 464 | ||||
| d1uqta_ | 456 | c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA | 2e-15 | |
| d1rzua_ | 477 | c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacte | 3e-10 | |
| d2bisa1 | 437 | c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro | 8e-10 | |
| d2bfwa1 | 196 | c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Py | 1e-05 | |
| d2f9fa1 | 166 | c.87.1.8 (A:2-167) First mannosyl transferase WbaZ | 5e-05 | |
| d2iw1a1 | 370 | c.87.1.8 (A:2-371) Lipopolysaccharide core biosynt | 0.001 |
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Score = 76.1 bits (186), Expect = 2e-15
Identities = 31/204 (15%), Positives = 69/204 (33%), Gaps = 24/204 (11%)
Query: 272 IISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQ-------- 323
I SV + K P + A+ L K + R + +
Sbjct: 257 IFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENE 316
Query: 324 --SLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAG-- 379
+ K +L ++ + L+K+ + VG+ + + + + EY+AA
Sbjct: 317 AGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDP 376
Query: 380 ---AIPIAHNSAGPKMDIVLEEDGQQTGFLA--QNAEEYADAIVKIISMPETERLEMAAA 434
+ + AG ++ + + + +E A A+ + ++M ER+ A
Sbjct: 377 ANPGVLVLSQFAGAANEL-------TSALIVNPYDRDEVAAALDRALTMSLAERISRHAE 429
Query: 435 ARRRAARFSEQRFYEDFKAAIRPI 458
+ + E F + ++ I
Sbjct: 430 MLDVIVKNDINHWQECFISDLKQI 453
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Length = 477 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Score = 60.1 bits (144), Expect = 3e-10
Identities = 28/198 (14%), Positives = 56/198 (28%), Gaps = 21/198 (10%)
Query: 270 PAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKS 329
P +++ +K L EA + RL +G+ + L
Sbjct: 292 PLFCVISRLTWQKGIDLMAEAVDEIVSL------GGRLVVLGAGDVALEGALLA------ 339
Query: 330 IELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAG 389
+ G V + G I E G++ + + G IP+ + G
Sbjct: 340 AASRHHGRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGG 399
Query: 390 PKMDIVLE------EDGQQTGFL--AQNAEEYADAIVKIISMPETERLEMAAAARRRAAR 441
D V++ TG + AI + + +L +
Sbjct: 400 LA-DTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMKSD 458
Query: 442 FSEQRFYEDFKAAIRPIL 459
S ++ + A ++
Sbjct: 459 VSWEKSAGLYAALYSQLI 476
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 58.3 bits (139), Expect = 8e-10
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 8/127 (6%)
Query: 336 GNVEFYKNLLYRDLVKLLGGAV-VGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDI 394
GNV+ +L R+ V+ L G+V I E FG+ +E M GAIPIA G + DI
Sbjct: 308 GNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLR-DI 366
Query: 395 VLEEDGQQTGFLAQ--NAEEYADAIVKIISMPETERLEMAAAARRRAARFSEQRFYEDFK 452
+ E TG L + + E A+AI+K + + ++ + ++RA FS ++ E +
Sbjct: 367 ITNE----TGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYV 422
Query: 453 AAIRPIL 459
A +
Sbjct: 423 KAYTGSI 429
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 196 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 43.6 bits (101), Expect = 1e-05
Identities = 34/177 (19%), Positives = 64/177 (36%), Gaps = 12/177 (6%)
Query: 268 EYPAIISVAQF-RPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLK 326
E + + +F R +K + L+A + + R +G + + +
Sbjct: 31 EGVTFMFIGRFDRGQKGVDVLLKAI--EILSSKKEFQEMRFIIIGKGDPELEGWARSLEE 88
Query: 327 DKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHN 386
+ L + +L G I E FG+ +E M GAIPIA
Sbjct: 89 KHGN------VKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASA 142
Query: 387 SAGPKMDIVLEEDGQQTGFLAQNAEEYADAIVKIISMPETERLEMAAAARRRAARFS 443
G + + + A + E A+AI+K + + ++ + ++RA FS
Sbjct: 143 VGGLRD---IITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFS 196
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} Length = 166 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 41.7 bits (96), Expect = 5e-05
Identities = 44/171 (25%), Positives = 66/171 (38%), Gaps = 19/171 (11%)
Query: 272 IISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIE 331
+SV + PEK LQLE F L +L VG ER K
Sbjct: 15 WLSVNRIYPEKRIELQLEVF--------KKLQDEKLYIVGWFSKGDHAERYARKIMKIAP 66
Query: 332 LKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPK 391
NV+F ++ +L+ L + + DE FG++ +E MA+G IA N G K
Sbjct: 67 ----DNVKFLGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGFK 122
Query: 392 MDIVLEEDGQQTGFLAQNAEEYADAIVKIISMPETERLEMAAAARRRAARF 442
+ + + + E DA+ K+ P+ + RRA F
Sbjct: 123 E---TVINEKTGYLVNADVNEIIDAMKKVSKNPD----KFKKDCFRRAKEF 166
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Length = 370 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Score = 38.4 bits (87), Expect = 0.001
Identities = 17/93 (18%), Positives = 32/93 (34%), Gaps = 8/93 (8%)
Query: 360 IHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFL---AQNAEEYADA 416
+H E GI ++E + AG + G + + G + + E+ +
Sbjct: 274 LHPAYQEAAGIVLLEAITAGLPVLTTAVCGYA-HYIADA---NCGTVIAEPFSQEQLNEV 329
Query: 417 IVKIISMPETERLEMAAAARRRAARFSEQRFYE 449
+ K ++ R+ A AR A E
Sbjct: 330 LRKALTQSP-LRMAWAENARHYADTQDLYSLPE 361
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 464 | |||
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 100.0 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 100.0 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 100.0 | |
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 99.94 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.94 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.92 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 99.37 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 99.23 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 99.22 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 99.2 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 99.17 | |
| d2acva1 | 461 | Triterpene UDP-glucosyl transferase UGT71G1 {Medic | 98.91 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 98.89 | |
| d1f6da_ | 376 | UDP-N-acetylglucosamine 2-epimerase {Escherichia c | 98.85 | |
| d2c1xa1 | 450 | UDP glucose:flavonoid 3-o-glucosyltransferase {Gra | 98.62 | |
| d2pq6a1 | 473 | (Iso)flavonoid glycosyltransferase {Medicago trunc | 98.33 | |
| d1pswa_ | 348 | ADP-heptose LPS heptosyltransferase II {Escherichi | 97.97 | |
| d2gj4a1 | 824 | Glycogen phosphorylase {Rabbit (Oryctolagus cunicu | 97.94 | |
| d2vcha1 | 471 | Hydroquinone glucosyltransferase {Thale cress (Ara | 97.71 | |
| d1l5wa_ | 796 | Maltodextrin phosphorylase (MALP) {Escherichia col | 97.59 | |
| d1ygpa_ | 876 | Glycogen phosphorylase {Baker's yeast (Saccharomyc | 96.37 | |
| d1rcua_ | 170 | Hypothetical protein TM1055 {Thermotoga maritima [ | 90.1 | |
| d2bw0a2 | 203 | 10-formyltetrahydrofolate dehydrogenase domain 1 { | 87.21 | |
| d1b74a1 | 105 | Glutamate racemase {Aquifex pyrophilus [TaxId: 271 | 83.06 |
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=100.00 E-value=4.3e-38 Score=310.05 Aligned_cols=297 Identities=13% Similarity=0.069 Sum_probs=211.7
Q ss_pred hhhcCCcEEEecccccccch----hhhccCceEEEEeeCCcchh----hhhhcccccccccCCCcccccchhhhHHHHHH
Q 012436 136 LCKFTPLYYFDTSGYAFTYP----LARIFGCRVICYTHYPTISL----DMISRVREGSSMYNNNASIAQSNWLSQCKIVY 207 (464)
Q Consensus 136 l~~~~~Dvv~~~~~~~~~~~----~~~~~~~p~v~~~h~p~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (464)
+...+|||||.+..+....+ .++..++|+|.++|...... +...........+..... ......
T Consensus 126 ~~~~~pDIvH~h~~~~~l~~~~~~~~~~~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~---- 197 (477)
T d1rzua_ 126 LPGWRPDMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGI----EYYNDV---- 197 (477)
T ss_dssp SSSCCCSEEEEEHHHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTT----EETTEE----
T ss_pred ccCCCCCEEEecchhHHHHHHHHHHhhCCCCCEEEEEecccccccCCHHHHHHhhcchhhcccccc----cccchh----
Confidence 34568999998765444433 34467899999999432111 111111111111110000 000000
Q ss_pred HHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHH-h---------CCCCCeEEecCCCCCCCCccCCCC-------------
Q 012436 208 YTFFSWMYGLVGSCADLAMVNSSWTQSHIEKL-W---------GIPDRIKRVYPPCDTSGLQVLPLE------------- 264 (464)
Q Consensus 208 ~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~-~---------~~~~~i~~i~~~~d~~~~~~~~~~------------- 264 (464)
...+.....+|.++++|...++..... + ....++.+|+||+|.+.+.+....
T Consensus 198 -----~~~~~~~~~ad~~~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~p~~~~~i~~~~~~~~~~~ 272 (477)
T d1rzua_ 198 -----SFLKGGLQTATALSTVSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKN 272 (477)
T ss_dssp -----EHHHHHHHHCSEEEESCHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTT
T ss_pred -----HHHHHHHHhhhhhhhccHHHHHHHHHHhcCcchhhhhhhccccEEEEECCcchhhccccccccccccchhhhHHH
Confidence 122445578999999999877654221 1 114578999999998877532111
Q ss_pred --------------CCCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHH
Q 012436 265 --------------RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSI 330 (464)
Q Consensus 265 --------------~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~ 330 (464)
..++.++|+|+||+.+.||++.+++|+.++.+. +.+++++|.|+. ....++++...
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~~------~~~l~~~G~G~~----~~~~~~~~~~~ 342 (477)
T d1rzua_ 273 RALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVSL------GGRLVVLGAGDV----ALEGALLAAAS 342 (477)
T ss_dssp HHHHHHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHHT------TCEEEEEECBCH----HHHHHHHHHHH
T ss_pred hhhhHHHHHHhcccccCCccEEEEEeeeeecCCcHHHHHHHHHHHhh------CCeEEEEecCCc----hHHHHHHHHHh
Confidence 023457899999999999999999999998764 789999998853 23344555554
Q ss_pred hcCCCCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccC------Cccce
Q 012436 331 ELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEED------GQQTG 404 (464)
Q Consensus 331 ~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~------~~~~g 404 (464)
++ .+++.+.+..+.++...+|++||++++||.+|+||++++|||+||+|||+|+.||. .|++.+.. .+.+|
T Consensus 343 ~~--~~~v~~~~~~~~~~~~~~~~~aD~~v~PS~~E~fglv~lEAma~G~PvVas~~GG~-~E~v~d~~~~~~~~~~~~G 419 (477)
T d1rzua_ 343 RH--HGRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGL-ADTVIDANHAALASKAATG 419 (477)
T ss_dssp HT--TTTEEEEESCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHH-HHHCCBCCHHHHHTTCCCB
T ss_pred hc--CCeEEEEcccChhHHHHHHHhCccccCCccccCCCHHHHHHHHcCCCEEEcCCCCC-cceeecCCccccccCCCce
Confidence 44 57899999999999999999999999999999999999999999999999999999 68877610 02488
Q ss_pred eecC--CHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHh
Q 012436 405 FLAQ--NAEEYADAIVKIIS--MPETERLEMAAAARRRAARFSEQRFYEDFKAAIRPILC 460 (464)
Q Consensus 405 ~~~~--~~~~la~~i~~l~~--~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 460 (464)
++++ |+++++++|.++++ .|++.++++++++.+ ++|||+.+++++.++|+++++
T Consensus 420 ~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~a~~--~~fsw~~~a~~~~~lY~~ll~ 477 (477)
T d1rzua_ 420 VQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMK--SDVSWEKSAGLYAALYSQLIS 477 (477)
T ss_dssp EEESSCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHT--CCCBHHHHHHHHHHHHHHHTC
T ss_pred EEeCCCCHHHHHHHHHHHHhhhCCHHHHHHHHHHHHH--hhCCHHHHHHHHHHHHHHHhC
Confidence 8886 99999999987663 188888888877742 689999999999999999874
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=100.00 E-value=8.1e-39 Score=311.98 Aligned_cols=395 Identities=19% Similarity=0.135 Sum_probs=256.7
Q ss_pred ceEEEecCCCCCC--CCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCccc--------CCCceeee
Q 012436 35 TSVAFFHPNTNDG--GGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVEL--------LHPPKVVH 104 (464)
Q Consensus 35 mkI~~~~~~~~~~--GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~ 104 (464)
|||++++..+++. ||.++++..|+++|++.|| +|.++++..+....+...... .++..+ ..++.++.
T Consensus 1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh--~V~Vvtp~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 77 (437)
T d2bisa1 1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGH--EVLVFTPSHGRFQGEEIGKIR-VFGEEVQVKVSYEERGNLRIYR 77 (437)
T ss_dssp CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTC--EEEEEEECTTSSCCEEEEEEE-CSSSEEEEEEEEEEETTEEEEE
T ss_pred CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCC--EEEEEecCCCccchhhcccee-ecccccceeeeeeccCCeEEEe
Confidence 8999999765553 8999999999999999995 555555433211111000000 000000 00111121
Q ss_pred eeccccccccc-Ccceehhhh-ch----hhhHHHHHHhhh-cCCcEEEecccccccch--hhhccCceEEEEeeCCcchh
Q 012436 105 LYRRKWIEEST-YPRFTMIGQ-SF----GSVYLSWEALCK-FTPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTISL 175 (464)
Q Consensus 105 ~~~~~~~~~~~-~~~~~~~~~-~~----~~~~~~~~~l~~-~~~Dvv~~~~~~~~~~~--~~~~~~~p~v~~~h~p~~~~ 175 (464)
+.......... .+.+..... .. .....+..+++. ..||+||++........ +++..++|+|+++|......
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDiIh~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~ 157 (437)
T d2bisa1 78 IGGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYFKIPAVFTIHRLNKSK 157 (437)
T ss_dssp EESSGGGCSCTTCSHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCSEEEEETGGGHHHHHHHHHHHCCCEEEEESSCCCCC
T ss_pred cCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECChhhhhHhhhhhccccCceeEEEeeccccc
Confidence 11111000000 000000000 00 011112222333 36899998765444333 45578999999999533100
Q ss_pred hhhhcccccccccCCCcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCC-CCCeEEecCCCC
Q 012436 176 DMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCD 254 (464)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~-~~~i~~i~~~~d 254 (464)
--....... . .. ..........++.....+|.+++.++.........++. ..++.+++||+|
T Consensus 158 ~~~~~~~~~-----~---------~~---~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~~~~ki~vi~~g~d 220 (437)
T d2bisa1 158 LPAFYFHEA-----G---------LS---ELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGID 220 (437)
T ss_dssp EEHHHHHHT-----T---------CG---GGCCSSEECHHHHHHHHSSEEEESCHHHHHHTHHHHGGGTTTEEECCCCCC
T ss_pred cchhhhhhc-----c---------ch---hhhhHHHHHHHHHHHHhhhhhcccchhhhhhhhhhhccccCceEEEecccc
Confidence 000000000 0 00 00000000123445578999999999888766555544 788999999999
Q ss_pred CCCCccCCCCC--------------CCCCcEEEEEeccC-CCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccH
Q 012436 255 TSGLQVLPLER--------------STEYPAIISVAQFR-PEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDE 319 (464)
Q Consensus 255 ~~~~~~~~~~~--------------~~~~~~i~~~G~~~-~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~ 319 (464)
.+.+.+..... ..+++.++|+|++. +.||++.+++|+..+..+... |+++|+++|.++.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~~Kg~~~ll~a~~~~~~~~~~--~~~~lvi~G~~~~---- 294 (437)
T d2bisa1 221 CSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEF--QEMRFIIIGKGDP---- 294 (437)
T ss_dssp TTTSCGGGCCSCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGG--GGEEEEEECCBCH----
T ss_pred cccccccccchhhHHHHHhhhhhhhccCCceEEEeecccccchhHHHHHhhhccccccccc--ccceeeeeccccc----
Confidence 98776432211 13558899999986 579999999999988654322 5899999998853
Q ss_pred HHHHHHHHHHHhcCCCCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccC
Q 012436 320 ERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEED 399 (464)
Q Consensus 320 ~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~ 399 (464)
.....++.+.+. ...++.+.|.++.+++..+++.||++++||..|++|++++|||+||+|||+++.||. .|++.+
T Consensus 295 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~adi~v~~s~~e~~~~~~~Eama~G~Pvi~~~~g~~-~e~i~~-- 369 (437)
T d2bisa1 295 ELEGWARSLEEK--HGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGL-RDIITN-- 369 (437)
T ss_dssp HHHHHHHHHHHT--CTTEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHTTTCEEEEESCTTH-HHHCCT--
T ss_pred ccccchhhhccc--cccceeccccCcHHHHHHHHhhhccccccccccccchHHHHHHHCCCCEEEeCCCCc-HHhEEC--
Confidence 222333333333 245778889999999999999999999999999999999999999999999999988 677765
Q ss_pred CccceeecC--CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhhc
Q 012436 400 GQQTGFLAQ--NAEEYADAIVKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIRPILCHA 462 (464)
Q Consensus 400 ~~~~g~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 462 (464)
++|++++ |+++++++|.++++.|++.++++++++++.+++|||++++++++++|++++.+.
T Consensus 370 --~~G~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~iY~~~i~r~ 432 (437)
T d2bisa1 370 --ETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSIDRA 432 (437)
T ss_dssp --TTCEEECTTCHHHHHHHHHHHHTTTTSCTHHHHHHHHHHHHHSCHHHHHHHHHHHHHTCSCCB
T ss_pred --CcEEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhH
Confidence 5898886 999999999998863678899999999998888999999999999999987653
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=4.4e-37 Score=292.28 Aligned_cols=350 Identities=15% Similarity=0.144 Sum_probs=241.1
Q ss_pred EEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeecccccccccC
Q 012436 37 VAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTY 116 (464)
Q Consensus 37 I~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (464)
|+|+.+.+.+.||+|+++.+++++|++.||+|+ +++...+.. .+...+++.++...+..
T Consensus 2 i~f~~~~y~p~GG~e~~~~~la~~L~~~G~~V~--v~~~~~~~~---------------~~~~~~~~~~~~~~~~~---- 60 (370)
T d2iw1a1 2 VAFCLYKYFPFGGLQRDFMRIASTVAARGHHVR--VYTQSWEGD---------------CPKAFELIQVPVKSHTN---- 60 (370)
T ss_dssp EEEECSEECTTCHHHHHHHHHHHHHHHTTCCEE--EEESEECSC---------------CCTTCEEEECCCCCSSH----
T ss_pred EEEEecCCCCCCCHHHHHHHHHHHHHHCCCEEE--EEecCCCCC---------------CCCceEEEEcCcccccc----
Confidence 788876444457999999999999999995555 455432111 11122333333322111
Q ss_pred cceehhhhchhhhHHHHHHhhhcCCcEEEecccccccchhhhccCceEEEEeeCCcchhhhhhcccccccccCCCccccc
Q 012436 117 PRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQ 196 (464)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (464)
............+.++..++|+++.+...+... +...+......... ..
T Consensus 61 -----~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~----------~~~~~~~~~~~~~~-~~--------------- 109 (370)
T d2iw1a1 61 -----HGRNAEYYAWVQNHLKEHPADRVVGFNKMPGLD----------VYFAADVCYAEKVA-QE--------------- 109 (370)
T ss_dssp -----HHHHHHHHHHHHHHHHHSCCSEEEESSCCTTCS----------EEECCSCCHHHHHH-HH---------------
T ss_pred -----chhhHHHHHHHHHHHHhcccceeeecccCchHH----------HHHHhhcccceeee-ee---------------
Confidence 011112233445567788999998655433221 01111000000000 00
Q ss_pred chhhhHHHHHHHHHHHHHHH--HHhhcCCEEEEcCHHHHHHHHHHhCC-CCCeEEecCCCCCCCCccCCCC---------
Q 012436 197 SNWLSQCKIVYYTFFSWMYG--LVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLE--------- 264 (464)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~--~~~~~ad~vi~~S~~~~~~~~~~~~~-~~~i~~i~~~~d~~~~~~~~~~--------- 264 (464)
..+....... ...+....+ .....++.+++.++...+.+.+.++. ..++.+++||+|.+.+......
T Consensus 110 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vi~~gv~~~~~~~~~~~~~~~~~r~~ 188 (370)
T d2iw1a1 110 KGFLYRLTSR-YRHYAAFERATFEQGKSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQK 188 (370)
T ss_dssp CCHHHHTSHH-HHHHHHHHHHHHSTTCCCEEEESCHHHHHHHHHHHCCCGGGEEECCCCCCGGGSGGGSCTTHHHHHHHH
T ss_pred cCccccccch-hchhHHHHHHHHhhccCceEEEecHHHHHHHHHhcCCCcceEEEEEeecccccccccCchhhhhhhhhc
Confidence 0000000000 011111122 22346789999999998888887776 6778999999998755422111
Q ss_pred --CCCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEcc
Q 012436 265 --RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYK 342 (464)
Q Consensus 265 --~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g 342 (464)
.++++++++++|++.++||++.+++|++.+.++. ++..+.++|++... +++++++++++..+++++.|
T Consensus 189 ~~~~~~~~~i~~~gr~~~~Kg~~~li~a~~~l~~~~----~~~~~~ii~g~~~~------~~~~~~~~~~~~~~~v~~~g 258 (370)
T d2iw1a1 189 NGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESL----RHNTLLFVVGQDKP------RKFEALAEKLGVRSNVHFFS 258 (370)
T ss_dssp TTCCTTCEEEEEECSCTTTTTHHHHHHHHHTSCHHH----HHTEEEEEESSSCC------HHHHHHHHHHTCGGGEEEES
T ss_pred cCCCccceEEEEEeccccccchhhhccccccccccc----ccceeeeccccccc------cccccccccccccccccccc
Confidence 1246789999999999999999999999987766 36777777766543 56788889999999999999
Q ss_pred CCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeec-C--CHHHHHHHHHH
Q 012436 343 NLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLA-Q--NAEEYADAIVK 419 (464)
Q Consensus 343 ~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~-~--~~~~la~~i~~ 419 (464)
+. +++.++|++||++++||..|++|++++|||+||+|||+|+.+|. .|++.+ +.+|+++ + |+++++++|.+
T Consensus 259 ~~--~~~~~~~~~adv~v~ps~~E~~~~~~~EAma~G~PvI~s~~~g~-~e~i~~---~~~G~l~~~~~d~~~la~~i~~ 332 (370)
T d2iw1a1 259 GR--NDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGY-AHYIAD---ANCGTVIAEPFSQEQLNEVLRK 332 (370)
T ss_dssp CC--SCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHTCCEEEETTSTT-THHHHH---HTCEEEECSSCCHHHHHHHHHH
T ss_pred cc--cccccccccccccccccccccccceeeecccCCeeEEEeCCCCh-HHHhcC---CCceEEEcCCCCHHHHHHHHHH
Confidence 87 78999999999999999999999999999999999999999998 788888 8899654 3 99999999999
Q ss_pred HHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q 012436 420 IISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIR 456 (464)
Q Consensus 420 l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 456 (464)
+++ |++.+++++++|+++++.|++..+.+++.++|+
T Consensus 333 ll~-d~~~~~~~~~~ar~~~~~~~~~~~~~~~~~ii~ 368 (370)
T d2iw1a1 333 ALT-QSPLRMAWAENARHYADTQDLYSLPEKAADIIT 368 (370)
T ss_dssp HHH-CHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHH
T ss_pred HHc-CHHHHHHHHHHHHHHHHHhChhHHHHHHHHHHh
Confidence 999 999999999999999976766666666666654
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=99.94 E-value=3.2e-25 Score=214.01 Aligned_cols=287 Identities=14% Similarity=0.123 Sum_probs=212.8
Q ss_pred hhcCC-cEEEecccccccch--hhh-ccCceEEEEeeCCcchhhhhhcccccccccCCCcccccchhhhHHHHHHHHHHH
Q 012436 137 CKFTP-LYYFDTSGYAFTYP--LAR-IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFS 212 (464)
Q Consensus 137 ~~~~~-Dvv~~~~~~~~~~~--~~~-~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (464)
+..++ |+|+.+..+...++ +.+ ..+.++++++|.|....+..+... + ++
T Consensus 118 ~~~~~~d~iwvhDyhl~llp~~lR~~~~~~~i~~flH~pfP~~~~fr~lp----------------~--------~~--- 170 (456)
T d1uqta_ 118 PLLQDDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEIFNALP----------------T--------YD--- 170 (456)
T ss_dssp GGCCTTCEEEEESGGGTTHHHHHHHTTCCSCEEEECCSCCCCHHHHTTST----------------T--------HH---
T ss_pred HhccCCCeEEEeccchhhhHHHHHHhCCCCcEEEEeCCCCCChHHhccCc----------------c--------hH---
Confidence 33344 67776666666665 333 577899999997654333321111 0 00
Q ss_pred HHHHHHhhcCCEEEEcCHHHHHHHHHHh-----------------CCCCCeEEecCCCCCCCCccCCCC-----------
Q 012436 213 WMYGLVGSCADLAMVNSSWTQSHIEKLW-----------------GIPDRIKRVYPPCDTSGLQVLPLE----------- 264 (464)
Q Consensus 213 ~~~~~~~~~ad~vi~~S~~~~~~~~~~~-----------------~~~~~i~~i~~~~d~~~~~~~~~~----------- 264 (464)
.....+-.+|.+...+...++.+.+.. +...++.++|+|+|.+.+......
T Consensus 171 -~il~~ll~~d~igf~~~~~~~~fl~~~~~ll~~~~~~~~~i~~~gr~v~v~~~p~GID~~~~~~~~~~~~~~~~~~l~~ 249 (456)
T d1uqta_ 171 -TLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKA 249 (456)
T ss_dssp -HHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTTEEEETTEEEEEEECCCCCCHHHHHHHHHSCCCHHHHHHHH
T ss_pred -HHHHHhhccccccccCHHHHHHHHHHHHHHhCcccccCCeEEecCceeeeeeecCcccchhhhhhcccHHHHHHHHHHH
Confidence 112234688999999988777665321 112356788999998766422111
Q ss_pred CCCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHH---HHHHHHHHHh-------cCC
Q 012436 265 RSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEER---LQSLKDKSIE-------LKV 334 (464)
Q Consensus 265 ~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~---~~~l~~~~~~-------~~l 334 (464)
...+++.|+++||+++.||++.+++|++++.+++++...++.++.+|.++..+..++ ..++.+++.+ .+.
T Consensus 250 ~~~~~~~il~V~Rld~~KGi~~~l~A~~~~l~~~p~~~~~v~lv~~~~~~~~~~~~~~~~~~ev~~lv~~in~~~~~~~~ 329 (456)
T d1uqta_ 250 ELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGW 329 (456)
T ss_dssp HTTTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTB
T ss_pred hcCCCeEEEEeCCCchhhchHHHHHHHHHHHHhCccccccEEEEEEcCCcccchHHHHHHHHHHHHHHHHHHhhhccCCC
Confidence 114678999999999999999999999999888754334678888887765444333 3344444333 356
Q ss_pred CCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCc-----EEEeCCCCCccceecccCCccceeecC-
Q 012436 335 DGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAI-----PIAHNSAGPKMDIVLEEDGQQTGFLAQ- 408 (464)
Q Consensus 335 ~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~P-----vI~~~~~~~~~~~v~~~~~~~~g~~~~- 408 (464)
.+.+.+.+.++.+++..+|+.||++++||..||||++++|||+||+| +|+|+.+|. .+.+. .|++++
T Consensus 330 ~~~v~~~~~~~~~~l~a~~~~Adv~v~~s~~EG~~lv~~Ea~a~~~p~~~g~lIlS~~~G~-~~~l~------~g~lVnP 402 (456)
T d1uqta_ 330 TPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGA-ANELT------SALIVNP 402 (456)
T ss_dssp CSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGG-GGTCT------TSEEECT
T ss_pred CceeeccCCcCHHHHhHHHhhhceeecCCccCCCCcHHHHHHHhCCCCCCCcEEEeCCCCC-HHHhC------CeEEECc
Confidence 77899999999999999999999999999999999999999999999 899999988 45542 367776
Q ss_pred -CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Q 012436 409 -NAEEYADAIVKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIRPI 458 (464)
Q Consensus 409 -~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 458 (464)
|++++|++|.++++|++++++++.+++++.+.+|++..+++.+++.++++
T Consensus 403 ~d~~~~A~ai~~aL~~~~~er~~~~~~~~~~v~~~~~~~W~~~fl~~l~~~ 453 (456)
T d1uqta_ 403 YDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQI 453 (456)
T ss_dssp TCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHhh
Confidence 99999999999999778899999999999998899999999999988875
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.94 E-value=7.3e-26 Score=194.34 Aligned_cols=164 Identities=24% Similarity=0.298 Sum_probs=136.9
Q ss_pred CCCcEEEEEeccC-CCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCC
Q 012436 267 TEYPAIISVAQFR-PEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLL 345 (464)
Q Consensus 267 ~~~~~i~~~G~~~-~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~ 345 (464)
++.+.|+|+||+. ++||++.++++++.+.+.... |+++|+++|.++. .+...++.+.+.+ ...+.+.|.++
T Consensus 30 ~~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~~~--~~~~l~i~G~g~~----~~~~~~~~~~~~~--~~~~~~~~~~~ 101 (196)
T d2bfwa1 30 DEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEF--QEMRFIIIGKGDP----ELEGWARSLEEKH--GNVKVITEMLS 101 (196)
T ss_dssp CSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGG--GGEEEEEECCBCH----HHHHHHHHHHHHC--TTEEEECSCCC
T ss_pred CCCCEEEEEcCCCccccCHHHHHHHHHhhhcccCC--CCeEEEEEeeccc----chhhhhhhhhhcc--ceeEEeeeccc
Confidence 4567899999996 689999999999999654322 6899999998742 2223333333333 45677889999
Q ss_pred hhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC--CHHHHHHHHHHHHcC
Q 012436 346 YRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ--NAEEYADAIVKIISM 423 (464)
Q Consensus 346 ~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~--~~~~la~~i~~l~~~ 423 (464)
.+++..+|+.||++++||..|++|.+++|||+||+|||+++.++. .+++.+ .+|++++ |+++++++|.+++++
T Consensus 102 ~~~l~~~~~~~di~v~ps~~e~~~~~~~Eam~~G~pvI~~~~~~~-~e~i~~----~~g~~~~~~~~~~l~~~i~~~l~~ 176 (196)
T d2bfwa1 102 REFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGL-RDIITN----ETGILVKAGDPGELANAILKALEL 176 (196)
T ss_dssp HHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEEEESCHHH-HHHCCT----TTCEEECTTCHHHHHHHHHHHHHC
T ss_pred cccchhccccccccccccccccccccchhhhhcCceeeecCCCcc-ceeecC----CceeeECCCCHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999887 687765 6888886 999999999998876
Q ss_pred CHHHHHHHHHHHHHHHHccC
Q 012436 424 PETERLEMAAAARRRAARFS 443 (464)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~s 443 (464)
+++.+++++++|++++.+||
T Consensus 177 ~~~~~~~~~~~a~~~a~~fs 196 (196)
T d2bfwa1 177 SRSDLSKFRENCKKRAMSFS 196 (196)
T ss_dssp CHHHHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHHHHhCC
Confidence 78899999999999986676
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.92 E-value=6.5e-25 Score=182.86 Aligned_cols=141 Identities=28% Similarity=0.397 Sum_probs=122.0
Q ss_pred cEEEEEeccCCCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHH
Q 012436 270 PAIISVAQFRPEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDL 349 (464)
Q Consensus 270 ~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~ 349 (464)
..++|+||+.+.||++.+++|++++ |+.+++++|.++..+. .+.+.+.+.+.. .++|+|+|+++.+++
T Consensus 13 ~~~l~iGrl~~~K~~~~~i~a~~~l--------~~~~l~ivg~~~~~~~---~~~~~~~~~~~~-~~~v~~~g~~~~~~~ 80 (166)
T d2f9fa1 13 DFWLSVNRIYPEKRIELQLEVFKKL--------QDEKLYIVGWFSKGDH---AERYARKIMKIA-PDNVKFLGSVSEEEL 80 (166)
T ss_dssp SCEEEECCSSGGGTHHHHHHHHHHC--------TTSCEEEEBCCCTTST---HHHHHHHHHHHS-CTTEEEEESCCHHHH
T ss_pred CEEEEEecCccccCHHHHHHHHHHh--------cCCeEEEEEecccccc---hhhhhhhhcccc-cCcEEEeeccccccc
Confidence 4588999999999999999999877 5789999998765422 233444444433 468999999999999
Q ss_pred HHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC-CHHHHHHHHHHHHcCCHHH
Q 012436 350 VKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ-NAEEYADAIVKIISMPETE 427 (464)
Q Consensus 350 ~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~-~~~~la~~i~~l~~~~~~~ 427 (464)
.++|+.||++++||..|++|++++|||++|+|||+++.++. .+++.+ +.+|++++ |+++++++|.++++ |++.
T Consensus 81 ~~~~~~ad~~i~ps~~e~~~~~~~Ea~~~g~pvi~s~~~~~-~e~i~~---~~~g~~~~~d~~~~~~~i~~l~~-~~~~ 154 (166)
T d2f9fa1 81 IDLYSRCKGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGF-KETVIN---EKTGYLVNADVNEIIDAMKKVSK-NPDK 154 (166)
T ss_dssp HHHHHHCSEEEECCSSCCSCHHHHHHHHTTCCEEEESSHHH-HHHCCB---TTTEEEECSCHHHHHHHHHHHHH-CTTT
T ss_pred ccccccccccccccccccccccccccccccccceeecCCcc-eeeecC---CcccccCCCCHHHHHHHHHHHHh-CHHH
Confidence 99999999999999999999999999999999999999988 788888 89999886 99999999999999 8753
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=99.37 E-value=3.4e-11 Score=111.44 Aligned_cols=331 Identities=11% Similarity=0.014 Sum_probs=169.2
Q ss_pred ceEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEEcccCCCCchhHHHHHHhhcCcccCCCceeeeeecccccccc
Q 012436 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (464)
Q Consensus 35 mkI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (464)
+||++.+. +. ||.-..+..++++|.+.|| +|..++.... .........+. ++..++........
T Consensus 1 kkili~~~--Gt-GGHv~~a~al~~~L~~~G~--eV~~i~~~~~-----~~~~~~~~~~~------~~~~~~~~~~~~~~ 64 (351)
T d1f0ka_ 1 KRLMVMAG--GT-GGHVFPGLAVAHHLMAQGW--QVRWLGTADR-----MEADLVPKHGI------EIDFIRISGLRGKG 64 (351)
T ss_dssp CEEEEECC--SS-HHHHHHHHHHHHHHHTTTC--EEEEEECTTS-----THHHHGGGGTC------EEEECCCCCCTTCC
T ss_pred CEEEEEcC--Cc-HHHHHHHHHHHHHHHhCCC--EEEEEEeCCc-----chhhcccccCC------cEEEEECCCcCCCC
Confidence 47888643 22 4777778899999999995 4444443211 11112222232 22222221111111
Q ss_pred cCcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccch--hhhccCceEEEEeeCCcchhhhhhcccccccccCCCc
Q 012436 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (464)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~--~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~ 192 (464)
....+..............+++++.+||+++.+.+...... .++..++|++.+.+.-..
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~a~~~~ip~~~~~~~~~~------------------- 125 (351)
T d1f0ka_ 65 IKALIAAPLRIFNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGIA------------------- 125 (351)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHHHCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSSC-------------------
T ss_pred HHHHHHHHHHHHHhHHHHHHHhhccccceeeecccchhhhhhhhhhhcccceeeccccccc-------------------
Confidence 11111111222233445556688899999987655443322 455889999876552110
Q ss_pred ccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCCCCCCCcc----CCCCCCCC
Q 012436 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQV----LPLERSTE 268 (464)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~d~~~~~~----~~~~~~~~ 268 (464)
.. ..+.....++.+...... .......+.++........ .......+
T Consensus 126 --------~~-----------~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (351)
T d1f0ka_ 126 --------GL-----------TNKWLAKIATKVMQAFPG----------AFPNAEVVGNPVRTDVLALPLPQQRLAGREG 176 (351)
T ss_dssp --------CH-----------HHHHHTTTCSEEEESSTT----------SSSSCEECCCCCCHHHHTSCCHHHHHTTCCS
T ss_pred --------ch-----------hHHHhhhhcceeeccccc----------cccceeEEcCCcccccccchhHHhhhhcccC
Confidence 00 012233566666543211 1222333444332211110 01111234
Q ss_pred CcEEEEEeccCCCCC-hHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChh
Q 012436 269 YPAIISVAQFRPEKA-HPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYR 347 (464)
Q Consensus 269 ~~~i~~~G~~~~~K~-~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~ 347 (464)
+..++.+|....... .+.+.+.+..+.. ....++.+..... ......... ....++...++. +
T Consensus 177 ~~~i~~~~gs~g~~~~~~~~~~~~~~l~~-------~~~~i~~~~~~~~-----~~~~~~~~~--~~~~~~~v~~f~--~ 240 (351)
T d1f0ka_ 177 PVRVLVVGGSQGARILNQTMPQVAAKLGD-------SVTIWHQSGKGSQ-----QSVEQAYAE--AGQPQHKVTEFI--D 240 (351)
T ss_dssp SEEEEEECTTTCCHHHHHHHHHHHHHHGG-------GEEEEEECCTTCH-----HHHHHHHHH--TTCTTSEEESCC--S
T ss_pred CcccccccccchhhhhHHHHHHhhhhhcc-------cceeeeeccccch-----hhhhhhhcc--cccccceeeeeh--h
Confidence 455555554332222 2344444444422 2333444433221 111222222 224578888998 7
Q ss_pred HHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCC---Cc---cceecccCCccceeecC----CHHHHHHHH
Q 012436 348 DLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAG---PK---MDIVLEEDGQQTGFLAQ----NAEEYADAI 417 (464)
Q Consensus 348 ~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~---~~---~~~v~~~~~~~~g~~~~----~~~~la~~i 417 (464)
++.++|+.||++|.- +.+.++.|++++|+|+|+..... .- .+.+.+ .+.|+..+ +.+.+.++|
T Consensus 241 ~~~~lm~~adl~It~----~G~~T~~Eal~~g~P~I~iP~~~~~~~Q~~NA~~l~~---~G~~~~~~~~~~~~e~l~~~l 313 (351)
T d1f0ka_ 241 DMAAAYAWADVVVCR----SGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEK---AGAAKIIEQPQLSVDAVANTL 313 (351)
T ss_dssp CHHHHHHHCSEEEEC----CCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHH---TTSEEECCGGGCCHHHHHHHH
T ss_pred hHHHHHHhCchhhcc----ccchHHHHHHHhCCceeeeecccCCchHHHHHHHHHH---CCCEEEechhhCCHHHHHHHH
Confidence 899999999999854 33578999999999999875432 10 112333 45666654 677787777
Q ss_pred HHHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q 012436 418 VKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAI 455 (464)
Q Consensus 418 ~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 455 (464)
..+ +++.+.+|++++++.......+.+++.+.++.
T Consensus 314 ~~l---~~~~~~~~~~~~~~~~~~~~a~~i~~~i~~l~ 348 (351)
T d1f0ka_ 314 AGW---SRETLLTMAERARAASIPDATERVANEVSRVA 348 (351)
T ss_dssp HTC---CHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHH
T ss_pred Hhh---CHHHHHHHHHHHHccCCccHHHHHHHHHHHHH
Confidence 664 66778888888876543334455555554443
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.23 E-value=1.6e-09 Score=101.79 Aligned_cols=109 Identities=11% Similarity=0.019 Sum_probs=72.8
Q ss_pred CCCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCc---cceecccCCccceeecC--
Q 012436 334 VDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPK---MDIVLEEDGQQTGFLAQ-- 408 (464)
Q Consensus 334 l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~---~~~v~~~~~~~~g~~~~-- 408 (464)
+++|+.+.+++|.. +++..+|++|. .|...++.||+++|+|+|+....+.- .+.+.+ .+.|...+
T Consensus 284 ~~~~v~~~~~~p~~---~ll~~~~~~I~----hgG~~t~~Eal~~GvP~l~~P~~~DQ~~na~~v~~---~G~g~~l~~~ 353 (401)
T d1rrva_ 284 DRDDCFAIDEVNFQ---ALFRRVAAVIH----HGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAA---LGIGVAHDGP 353 (401)
T ss_dssp CCTTEEEESSCCHH---HHGGGSSEEEE----CCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHH---HTSEEECSSS
T ss_pred CCCCEEEEeccCcH---HHhhhccEEEe----cCCchHHHHHHHhCCCEEEecccccHHHHHHHHHH---CCCEEEcCcC
Confidence 46799999999754 45788999995 45667899999999999998766510 223444 46776664
Q ss_pred --CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Q 012436 409 --NAEEYADAIVKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIRPIL 459 (464)
Q Consensus 409 --~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 459 (464)
++++++++|.++++ ++ +.+++++..+.... .-+.+..+.+++.+
T Consensus 354 ~~~~~~L~~ai~~vl~--~~----~r~~a~~~~~~~~~-~g~~~aa~~ie~~~ 399 (401)
T d1rrva_ 354 TPTFESLSAALTTVLA--PE----TRARAEAVAGMVLT-DGAAAAADLVLAAV 399 (401)
T ss_dssp CCCHHHHHHHHHHHTS--HH----HHHHHHHHTTTCCC-CHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhC--HH----HHHHHHHHHHHHhh-cCHHHHHHHHHHHh
Confidence 79999999999985 43 33344443333322 23344555555443
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.22 E-value=1.1e-09 Score=102.63 Aligned_cols=109 Identities=17% Similarity=0.132 Sum_probs=72.1
Q ss_pred CCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCc-------cceecccCCccceeec
Q 012436 335 DGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPK-------MDIVLEEDGQQTGFLA 407 (464)
Q Consensus 335 ~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~-------~~~v~~~~~~~~g~~~ 407 (464)
++++.+.|++|.. ++++.+|++|..+ ...++.|||++|+|+|+....+.. .+.+.+ .+.|+..
T Consensus 269 ~~~v~i~~~~p~~---~ll~~a~~~v~hg----G~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA~~l~~---~G~g~~l 338 (391)
T d1pn3a_ 269 GADCFVVGEVNLQ---ELFGRVAAAIHHD----SAGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAE---LGVGVAV 338 (391)
T ss_dssp CTTCCEESSCCHH---HHHTTSSCEEEES----CHHHHHHHHHHTCCEEEECSSCCBTTBCCHHHHHHHH---HTSEEEE
T ss_pred CCCEEEecccCHH---HHHhhccEEEecC----chHHHHHHHHhCCcEEEeccccCCcchHHHHHHHHHH---CCCEEEc
Confidence 6789999999754 4588999999763 346899999999999998755420 123334 4677666
Q ss_pred C----CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHh
Q 012436 408 Q----NAEEYADAIVKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIRPILC 460 (464)
Q Consensus 408 ~----~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 460 (464)
+ ++++++++|.++++ +. +.+++++..+....+ -..+..+.+++.+.
T Consensus 339 ~~~~~~~~~l~~~i~~~l~-~~-----~r~~a~~~a~~~~~~-g~~~aa~~i~~~l~ 388 (391)
T d1pn3a_ 339 DGPVPTIDSLSAALDTALA-PE-----IRARATTVADTIRAD-GTTVAAQLLFDAVS 388 (391)
T ss_dssp CCSSCCHHHHHHHHHHHTS-TT-----HHHHHHHHGGGSCSC-HHHHHHHHHHHHHH
T ss_pred CcCCCCHHHHHHHHHHHhC-HH-----HHHHHHHHHHHHHhc-CHHHHHHHHHHHHH
Confidence 3 69999999999986 53 233444444444322 22333444444443
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=99.20 E-value=2.2e-09 Score=99.50 Aligned_cols=280 Identities=13% Similarity=0.015 Sum_probs=175.9
Q ss_pred hhHHHHHHhhhcCCcEEEecccccccch---hhhccCceEEEEeeCCcchhhhhhcccccccccCCCcccccchhhhHHH
Q 012436 128 SVYLSWEALCKFTPLYYFDTSGYAFTYP---LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCK 204 (464)
Q Consensus 128 ~~~~~~~~l~~~~~Dvv~~~~~~~~~~~---~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (464)
......+.+.+.+||+|+.+......+. .+...++|++. +|....+.++. .++...
T Consensus 76 ~~~~~~~~l~~~kPD~vlv~GDr~e~la~a~aa~~~~ipi~H-iegG~rsg~~~------------------~~~~de-- 134 (373)
T d1v4va_ 76 ILPQAARALKEMGADYVLVHGDTLTTFAVAWAAFLEGIPVGH-VEAGLRSGNLK------------------EPFPEE-- 134 (373)
T ss_dssp HHHHHHHHHHHTTCSEEEEESSCHHHHHHHHHHHHTTCCEEE-ETCCCCCSCTT------------------SSTTHH--
T ss_pred HHHHHhhhhhhcCcccccccccCccchhHHHHHHHhhhhhee-ecccccccccc------------------cCcchh--
Confidence 3445666788999998875444232322 44578999864 34221111110 000011
Q ss_pred HHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCC-CCCC----CccCCCCCCCCCcEEEEEeccC
Q 012436 205 IVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPC-DTSG----LQVLPLERSTEYPAIISVAQFR 279 (464)
Q Consensus 205 ~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~-d~~~----~~~~~~~~~~~~~~i~~~G~~~ 279 (464)
. ....+-+.+|..+|.++..++.+.+.+-.+.++.++.++. |.-. ..........+.+.++...+..
T Consensus 135 -~-------~R~~iskls~~hf~~t~~~~~~L~~~Ge~~~~I~~vG~p~~D~i~~~~~~~~~~~~~~~~~~~lvt~hr~~ 206 (373)
T d1v4va_ 135 -A-------NRRLTDVLTDLDFAPTPLAKANLLKEGKREEGILVTGQTGVDAVLLAAKLGRLPEGLPEGPYVTVTMHRRE 206 (373)
T ss_dssp -H-------HHHHHHHHCSEEEESSHHHHHHHHTTTCCGGGEEECCCHHHHHHHHHHHHCCCCTTCCSSCEEEECCCCGG
T ss_pred -h-------hhhhhccccceeeecchhhhhhhhhhcccccceeecccchhhHHHhhhhhcccccccccccceeEEecccc
Confidence 1 1133447899999999999999988854467887777652 2100 0011122234456677777776
Q ss_pred CCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChhHHHHHHhcCcEE
Q 012436 280 PEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYRDLVKLLGGAVVG 359 (464)
Q Consensus 280 ~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~ 359 (464)
..++.+.+.+++..+.... +++.+++...... .......+ .....+++.++..+++.++..+++.|+++
T Consensus 207 n~~~~~~~~~~~~~~~~~~----~~~~~i~p~~~~~----~~~~~~~~---~~~~~~n~~~~~~l~~~~~l~ll~~s~~v 275 (373)
T d1v4va_ 207 NWPLLSDLAQALKRVAEAF----PHLTFVYPVHLNP----VVREAVFP---VLKGVRNFVLLDPLEYGSMAALMRASLLL 275 (373)
T ss_dssp GGGGHHHHHHHHHHHHHHC----TTSEEEEECCSCH----HHHHHHHH---HHTTCTTEEEECCCCHHHHHHHHHTEEEE
T ss_pred ccchHHHHHHHHHHHhhhc----ccceeeeeecccc----cchhhhhh---hhcccccceeeccchHHHHHHHhhhceeE
Confidence 6677888888888887765 3667766544321 22222222 23335689999999999999999999998
Q ss_pred EEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC-CHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012436 360 IHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ-NAEEYADAIVKIISMPETERLEMAAAARRR 438 (464)
Q Consensus 360 v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~-~~~~la~~i~~l~~~~~~~~~~~~~~~~~~ 438 (464)
+--| |..+.||.++|+|+|.-...+.+.+-+.. |.+ .+++ |.+++.+++..++. ++..++++...
T Consensus 276 ignS-----ssgi~Ea~~lg~P~Inir~~~eRqeg~~~---g~n-vlv~~d~~~I~~~i~~~l~-~~~~~~~~~~~---- 341 (373)
T d1v4va_ 276 VTDS-----GGLQEEGAALGVPVVVLRNVTERPEGLKA---GIL-KLAGTDPEGVYRVVKGLLE-NPEELSRMRKA---- 341 (373)
T ss_dssp EESC-----HHHHHHHHHTTCCEEECSSSCSCHHHHHH---TSE-EECCSCHHHHHHHHHHHHT-CHHHHHHHHHS----
T ss_pred eccc-----chhhhcchhhcCcEEEeCCCccCHHHHhc---Cee-EEcCCCHHHHHHHHHHHHc-CHHHHhhcccC----
Confidence 8543 55678999999999988554454555555 444 4455 99999999999999 88776654321
Q ss_pred HHccCHHHHHHHHHHHHHHHHhh
Q 012436 439 AARFSEQRFYEDFKAAIRPILCH 461 (464)
Q Consensus 439 ~~~~s~~~~~~~~~~~~~~~~~~ 461 (464)
-.-|.-.+.++++.+.+.+.+..
T Consensus 342 ~npYGdG~as~rI~~~L~~~~~~ 364 (373)
T d1v4va_ 342 KNPYGDGKAGLMVARGVAWRLGL 364 (373)
T ss_dssp CCSSCCSCHHHHHHHHHHHHTTS
T ss_pred CCCCCCCHHHHHHHHHHHHHhCC
Confidence 03355555666666666665543
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=99.17 E-value=1.4e-08 Score=94.04 Aligned_cols=349 Identities=12% Similarity=0.057 Sum_probs=185.8
Q ss_pred ccceEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCceEEE-cccCCCCchhHHHHHHhhcCcccCCCceeeeeeccccc
Q 012436 33 RTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVY-TGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWI 111 (464)
Q Consensus 33 ~~mkI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (464)
+||||+++...-+.. --+.-++++|.+.. ++++.++ |+.+ ....+...+.+++.. . +.+....
T Consensus 1 ~k~Ki~~v~GtR~e~----~kl~pli~~l~~~~-~~~~~li~tG~H----~~~~~~~~~~~~i~~--~---~~~~~~~-- 64 (377)
T d1o6ca_ 1 KKLKVMTVFGTRPEA----IKMAPLVLELKKYP-EIDSYVTVTAQH----RQMLDQVLDAFHIKP--D---FDLNIMK-- 64 (377)
T ss_dssp CCEEEEEEECSHHHH----HHHHHHHHHGGGCT-TEEEEEEECCSC----GGGTHHHHHHTTCCC--S---EECCCCC--
T ss_pred CCceEEEEEEchHhH----HHHHHHHHHHHhCC-CCCEEEEEeCCC----HHHHHHHHhhcCCCC--c---eeeecCC--
Confidence 579999987543221 23356788888753 2454444 4433 123344444455421 1 1111100
Q ss_pred ccccCcceehhhhchhhhHHHHHHhhhcCCcEEEecccccccch---hhhccCceEEEEeeCCcchhhhhhccccccccc
Q 012436 112 EESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP---LARIFGCRVICYTHYPTISLDMISRVREGSSMY 188 (464)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~---~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~ 188 (464)
... ......-.....+.+.+++.+||+|+.+......+. .+...++|++. +|....+.+..
T Consensus 65 --~~~---~~~~~~~~~i~~~~~~~~~~kpD~v~v~GDr~e~la~a~aa~~~~Ipi~H-iegG~~s~~~~---------- 128 (377)
T d1o6ca_ 65 --ERQ---TLAEITSNALVRLDELFKDIKPDIVLVHGDTTTTFAGSLAAFYHQIAVGH-VEAGLRTGNKY---------- 128 (377)
T ss_dssp --TTC---CHHHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCEEEE-ESCCCCCSCTT----------
T ss_pred --CCC---CHHHHHHHHHHhhhhhhhhcccceeEeeecccccchhhhhhhhccceEEE-Eeccccccccc----------
Confidence 000 111111233455667788899998875544332322 55589999843 45322111000
Q ss_pred CCCcccccchhhhHHHHHHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCC-CC-------CCCcc
Q 012436 189 NNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPC-DT-------SGLQV 260 (464)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~-d~-------~~~~~ 260 (464)
.++... . ....+-+.+|..+|.++..++.+.+.+-.+.++.++.++. |. .....
T Consensus 129 --------~~~~de---~-------~R~~iskls~~hf~~t~~~~~~L~~~G~~~~~I~~vG~~~~D~i~~~~~~~~~~~ 190 (377)
T d1o6ca_ 129 --------SPFPEE---L-------NRQMTGAIADLHFAPTGQAKDNLLKENKKADSIFVTGNTAIDALNTTVRDGYSHP 190 (377)
T ss_dssp --------TTTTHH---H-------HHHHHHHHCSEEEESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHCCSSCCCS
T ss_pred --------ccCchh---h-------hccccccceeEEeecchhhhhhhhhhccccceEeeccchhHHHHHHHHHHHHhhh
Confidence 000010 1 1133447899999999999999999855467888887753 21 00000
Q ss_pred CCCCCCCCCcEEEEEeccCCC-CChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHH-HHhcCCCCcE
Q 012436 261 LPLERSTEYPAIISVAQFRPE-KAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDK-SIELKVDGNV 338 (464)
Q Consensus 261 ~~~~~~~~~~~i~~~G~~~~~-K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~-~~~~~l~~~v 338 (464)
.......+...++..-+.... +.....+.++..+.... +++.+++...... ..+.. .+.+...+++
T Consensus 191 ~~~~~~~~~~ilvt~Hr~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~~~~~--------~~~~~~~~~~~~~~ni 258 (377)
T d1o6ca_ 191 VLDQVGEDKMILLTAHRRENLGEPMENMFKAIRRIVGEF----EDVQVVYPVHLNP--------VVREAAHKHFGDSDRV 258 (377)
T ss_dssp TTTTTTTSEEEEECC----------HHHHHHHHHHHHHC----TTEEEEEC----C--------HHHHHHHHC--CCSSE
T ss_pred hhhhccCCceEEEEeccccccccchHHHHHHHHhhcccc----ccccccccccccc--------ccchhhhhccccccce
Confidence 001111333445555554333 33445555565555554 2555544433221 12222 2233446799
Q ss_pred EEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC-CHHHHHHHH
Q 012436 339 EFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ-NAEEYADAI 417 (464)
Q Consensus 339 ~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~-~~~~la~~i 417 (464)
.++..+++.++..+++.|++++--| |..+.||-.+|+|+|.-...+.+.+-+.. | +.++++ |.+++.+++
T Consensus 259 ~~~~~l~~~~fl~llk~s~~vIgnS-----ss~i~Ea~~lg~P~Inir~~tERqe~~~~---g-~nilv~~~~~~I~~~i 329 (377)
T d1o6ca_ 259 HLIEPLEVIDFHNFAAKSHFILTDS-----GGVQEEAPSLGKPVLVLRDTTERPEGVEA---G-TLKLAGTDEENIYQLA 329 (377)
T ss_dssp EECCCCCHHHHHHHHHHCSEEEEC-------CHHHHGGGGTCCEEEECSCCC---CTTT---T-SSEEECSCHHHHHHHH
T ss_pred EeccccchHHHHHHHhhhheeeccc-----chhHHhhhhhhceEEEeCCCCcCcchhhc---C-eeEECCCCHHHHHHHH
Confidence 9999999999999999999988443 44588999999999988655444555444 4 445565 999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Q 012436 418 VKIISMPETERLEMAAAARRRAARFSEQRFYEDFKAAIRP 457 (464)
Q Consensus 418 ~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 457 (464)
..++. ++...+.+.+. -..|.-...++++.+.+..
T Consensus 330 ~~~l~-~~~~~~~~~~~----~npYGdG~as~rI~~~L~~ 364 (377)
T d1o6ca_ 330 KQLLT-DPDEYKKMSQA----SNPYGDGEASRRIVEELLF 364 (377)
T ss_dssp HHHHH-CHHHHHHHHHC----CCTTCCSCHHHHHHHHHHH
T ss_pred HHHHh-ChHHHhhhccC----CCCCCCChHHHHHHHHHHH
Confidence 99998 87666544221 1234444455555555544
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Probab=98.91 E-value=2.4e-06 Score=80.90 Aligned_cols=83 Identities=13% Similarity=0.037 Sum_probs=59.7
Q ss_pred CCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCcc----ceecccCCccceeecC--
Q 012436 335 DGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKM----DIVLEEDGQQTGFLAQ-- 408 (464)
Q Consensus 335 ~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~----~~v~~~~~~~~g~~~~-- 408 (464)
++|+.+..+.+..++. .+.++|++|.- |...++.||+.+|+|+|+....+--. .+++. .+.|+..+
T Consensus 329 ~~n~~v~~~~pq~~~l-~~p~~~~fItH----GG~gs~~eAl~~GVP~l~~P~~~DQ~~nA~rlve~---~G~G~~l~~~ 400 (461)
T d2acva1 329 EGKGMICGWAPQVEVL-AHKAIGGFVSH----CGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKE---WGVGLGLRVD 400 (461)
T ss_dssp HCSEEEESSCCHHHHH-HSTTEEEEEEC----CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHT---SCCEEESCSS
T ss_pred CCCeEEEecCCHHHHH-hcccCCEEEec----CCccHHHHHHHcCCCEEeCCcccchHHHHHHHHHH---hCceEEeecc
Confidence 4688888888776664 57889999843 44568999999999999987554311 12333 45665442
Q ss_pred --------CHHHHHHHHHHHHcCCHH
Q 012436 409 --------NAEEYADAIVKIISMPET 426 (464)
Q Consensus 409 --------~~~~la~~i~~l~~~~~~ 426 (464)
+.++++++|.++++ ++.
T Consensus 401 ~~~~~~~~t~~~l~~a~~~vl~-~d~ 425 (461)
T d2acva1 401 YRKGSDVVAAEEIEKGLKDLMD-KDS 425 (461)
T ss_dssp CCTTCCCCCHHHHHHHHHHHTC-TTC
T ss_pred ccccCCccCHHHHHHHHHHHhh-CCH
Confidence 68999999999997 543
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.89 E-value=2.3e-07 Score=86.38 Aligned_cols=79 Identities=15% Similarity=0.077 Sum_probs=60.2
Q ss_pred CCCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCc---cceecccCCccceeecC--
Q 012436 334 VDGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPK---MDIVLEEDGQQTGFLAQ-- 408 (464)
Q Consensus 334 l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~---~~~v~~~~~~~~g~~~~-- 408 (464)
.++|+++.+++|+. ++|..+|++|. .+...++.||+++|+|+|+....+.- ...+.+ .+.|...+
T Consensus 283 ~~~nv~~~~~~p~~---~~l~~~~~~V~----hgG~~t~~Eal~~GvP~v~~P~~~DQ~~na~~l~~---~G~g~~l~~~ 352 (401)
T d1iira_ 283 DGADCFAIGEVNHQ---VLFGRVAAVIH----HGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAE---LGVGVAHDGP 352 (401)
T ss_dssp CGGGEEECSSCCHH---HHGGGSSEEEE----CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH---HTSEEECSSS
T ss_pred CCCCEEEEeccCHH---HHHhhcCEEEe----cCCchHHHHHHHhCCCEEEccccccHHHHHHHHHH---CCCEEEcCcC
Confidence 36789999999754 56888999994 46678999999999999997655410 122334 46676653
Q ss_pred --CHHHHHHHHHHHHc
Q 012436 409 --NAEEYADAIVKIIS 422 (464)
Q Consensus 409 --~~~~la~~i~~l~~ 422 (464)
++++++++|.++++
T Consensus 353 ~~~~~~l~~ai~~~l~ 368 (401)
T d1iira_ 353 IPTFDSLSAALATALT 368 (401)
T ss_dssp SCCHHHHHHHHHHHTS
T ss_pred CCCHHHHHHHHHHHhC
Confidence 79999999999986
|
| >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Escherichia coli [TaxId: 562]
Probab=98.85 E-value=2.4e-07 Score=85.30 Aligned_cols=274 Identities=13% Similarity=0.057 Sum_probs=162.5
Q ss_pred hHHHHHHhhhcCCcEEEecccccccch---hhhccCceEEEEeeCCcchhhhhhcccccccccCCCcccccchhhhHHHH
Q 012436 129 VYLSWEALCKFTPLYYFDTSGYAFTYP---LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKI 205 (464)
Q Consensus 129 ~~~~~~~l~~~~~Dvv~~~~~~~~~~~---~~~~~~~p~v~~~h~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (464)
.....+.+.+.+||+|+.+......+. .+...++|++. +|....+.++.. ++....
T Consensus 75 i~~~~~~~~~~kPD~v~v~GDr~e~la~a~aa~~~~ipi~H-iegG~~s~~~~~------------------~~pde~-- 133 (376)
T d1f6da_ 75 LEGLKPILAEFKPDVVLVHGDTTTTLATSLAAFYQRIPVGH-VEAGLRTGDLYS------------------PWPEEA-- 133 (376)
T ss_dssp HHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHTTTCCEEE-ESCCCCCSCTTS------------------STTHHH--
T ss_pred HHhhHHHHHhccCcceeeeccccchhhHHHHHHhhCceEEE-Eecccccccccc------------------cCchhh--
Confidence 344556688899998875443332322 45588998754 553322111100 000100
Q ss_pred HHHHHHHHHHHHHhhcCCEEEEcCHHHHHHHHHHhCCCCCeEEecCCC-CC--------CCCc--------cCCCCCCCC
Q 012436 206 VYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPC-DT--------SGLQ--------VLPLERSTE 268 (464)
Q Consensus 206 ~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~i~~i~~~~-d~--------~~~~--------~~~~~~~~~ 268 (464)
....+-+.+|..+|.++..++.+.+.+-.+.+++++.++. |. .... ........+
T Consensus 134 --------~R~~iskls~~hf~~~~~~~~~L~~~G~~~~~I~~vG~~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (376)
T d1f6da_ 134 --------NRTLTGHLAMYHFSPTETSRQNLLRENVADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDK 205 (376)
T ss_dssp --------HHHHHHHTCSEEEESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTS
T ss_pred --------hhhhhccceeEEEeccHHHHhHHHhcCCCccccceecCchHHHHHHHHhhhhccchhhhhhhccccccCCCC
Confidence 1133448899999999999999999865578888887753 21 0000 000111123
Q ss_pred CcEEEEEeccC-CCCChHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChh
Q 012436 269 YPAIISVAQFR-PEKAHPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYR 347 (464)
Q Consensus 269 ~~~i~~~G~~~-~~K~~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~ 347 (464)
+..++..-+.. ..+..+.++.++..+.... .++.+++..... .......... +...+++.+...+++.
T Consensus 206 ~~ilvt~H~~~~~~~~~~~i~~~l~~~~~~~----~~~~ii~p~~~~----~~~~~~~~~~---~~~~~ni~~~~~l~~~ 274 (376)
T d1f6da_ 206 KMILVTGHRRESFGRGFEEICHALADIATTH----QDIQIVYPVHLN----PNVREPVNRI---LGHVKNVILIDPQEYL 274 (376)
T ss_dssp EEEEECCCCBSSCCHHHHHHHHHHHHHHHHC----TTEEEEEECCBC----HHHHHHHHHH---HTTCTTEEEECCCCHH
T ss_pred ceEEEecccchhhhhhHHHHHHHHhhhhhhc----ceeEEecccccc----hhhhhhHhhh---hcccccceeeccccHH
Confidence 34444444433 3355677788888776654 256665554321 1112222222 2335689999999999
Q ss_pred HHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccceecccCCccceeecC-CHHHHHHHHHHHHcCCHH
Q 012436 348 DLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ-NAEEYADAIVKIISMPET 426 (464)
Q Consensus 348 ~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~-~~~~la~~i~~l~~~~~~ 426 (464)
+...+++.|++++--| |..+.||-.+|+|+|.-..+....+-+.. ++.++++ |.+++.+++.+++. ++.
T Consensus 275 ~fl~ll~~a~~vignS-----ssgi~Ea~~lg~P~Inir~~ter~~~~~~----g~~i~v~~~~~~I~~ai~~~l~-~~~ 344 (376)
T d1f6da_ 275 PFVWLMNHAWLILTDS-----GGIQEEAPSLGKPVLVMRDTTERPEAVTA----GTVRLVGTDKQRIVEEVTRLLK-DEN 344 (376)
T ss_dssp HHHHHHHHCSEEEESS-----SGGGGTGGGGTCCEEECSSCCSCHHHHHH----TSEEECCSSHHHHHHHHHHHHH-CHH
T ss_pred HHHHHHhhceEEEecC-----cchHhhHHHhCCCEEEcCCCccCccceec----CeeEECCCCHHHHHHHHHHHHh-ChH
Confidence 9999999999988553 44567999999999976444333444443 3445565 99999999999998 765
Q ss_pred HHHHHHHHHHHHH-HccCHHHHHHHHHHHHHH
Q 012436 427 ERLEMAAAARRRA-ARFSEQRFYEDFKAAIRP 457 (464)
Q Consensus 427 ~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~ 457 (464)
....+. .. ..|.-.+.++++.+++++
T Consensus 345 ~~~~~~-----~~~npYGdG~as~rI~~iLk~ 371 (376)
T d1f6da_ 345 EYQAMS-----RAHNPYGDGQACSRILEALKN 371 (376)
T ss_dssp HHHHHH-----HSCCTTCCSCHHHHHHHHHHH
T ss_pred hhhhhc-----cCCCCCCCChHHHHHHHHHHh
Confidence 443321 11 235444556666666654
|
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Probab=98.62 E-value=2.5e-05 Score=73.55 Aligned_cols=83 Identities=14% Similarity=0.004 Sum_probs=60.9
Q ss_pred CCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccc---ee-cccCCccceeecC--
Q 012436 335 DGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMD---IV-LEEDGQQTGFLAQ-- 408 (464)
Q Consensus 335 ~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~---~v-~~~~~~~~g~~~~-- 408 (464)
++|+.+..++|+.++.. ..+++++|.- |...++.||+.+|+|+|+....+--.. -+ +. .+.|...+
T Consensus 318 ~~nv~~~~~~pq~~lL~-hp~~~~fItH----GG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~---~G~G~~l~~~ 389 (450)
T d2c1xa1 318 RGYGMVVPWAPQAEVLA-HEAVGAFVTH----CGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDV---LEIGVRIEGG 389 (450)
T ss_dssp TTTEEEESCCCHHHHHT-STTEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHT---SCCEEECGGG
T ss_pred cccccccccCChHhhhc-cCceeEEEcc----CCccHHHHHHHcCCCEEecccccchHHHHHHHHHH---cCcEEEecCC
Confidence 56899999998776422 2667878743 456689999999999999876643222 12 22 36776654
Q ss_pred --CHHHHHHHHHHHHcCCHH
Q 012436 409 --NAEEYADAIVKIISMPET 426 (464)
Q Consensus 409 --~~~~la~~i~~l~~~~~~ 426 (464)
+.+++.++|.++++ |+.
T Consensus 390 ~~t~~~l~~ai~~vL~-d~~ 408 (450)
T d2c1xa1 390 VFTKSGLMSCFDQILS-QEK 408 (450)
T ss_dssp SCCHHHHHHHHHHHHH-SHH
T ss_pred CcCHHHHHHHHHHHhc-CcH
Confidence 89999999999999 874
|
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Probab=98.33 E-value=3.3e-05 Score=73.03 Aligned_cols=93 Identities=16% Similarity=0.008 Sum_probs=66.9
Q ss_pred CCcEEEccCCChhHHHHHH--hcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccc----eecccCCccceeecC
Q 012436 335 DGNVEFYKNLLYRDLVKLL--GGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMD----IVLEEDGQQTGFLAQ 408 (464)
Q Consensus 335 ~~~v~~~g~~~~~~~~~~l--~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~----~v~~~~~~~~g~~~~ 408 (464)
++||.+..++|+.++ | .+++++|.- |...++.||+.+|+|+|+....+--.. +.+. .+.|...+
T Consensus 345 ~~Nv~~~~~~Pq~~l---L~hp~~~~fItH----GG~~s~~Eal~~GVP~lv~P~~~DQ~~na~rv~~~---~G~G~~l~ 414 (473)
T d2pq6a1 345 ADRGLIASWCPQDKV---LNHPSIGGFLTH----CGWNSTTESICAGVPMLCWPFFADQPTDCRFICNE---WEIGMEID 414 (473)
T ss_dssp TTTEEEESCCCHHHH---HTSTTEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHT---SCCEEECC
T ss_pred cCceEEeeeCCHHHH---hcCCcCcEEEec----CCccHHHHHHHcCCCEEeccchhhhHHHHHHHHHH---cCeEEeeC
Confidence 579999999987765 6 577788843 556689999999999999876543122 2222 36676665
Q ss_pred ---CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 012436 409 ---NAEEYADAIVKIISMPETERLEMAAAARRRA 439 (464)
Q Consensus 409 ---~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~ 439 (464)
+.++++++|.++++ |+.- +++.+++++..
T Consensus 415 ~~~t~~~l~~ai~~vl~-d~~~-~~~r~~a~~l~ 446 (473)
T d2pq6a1 415 TNVKREELAKLINEVIA-GDKG-KKMKQKAMELK 446 (473)
T ss_dssp SSCCHHHHHHHHHHHHT-SHHH-HHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHc-CChH-HHHHHHHHHHH
Confidence 89999999999999 8752 34555555543
|
| >d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: ADP-heptose LPS heptosyltransferase II domain: ADP-heptose LPS heptosyltransferase II species: Escherichia coli [TaxId: 562]
Probab=97.97 E-value=0.0003 Score=63.47 Aligned_cols=101 Identities=12% Similarity=-0.006 Sum_probs=65.2
Q ss_pred EEEEEec-cCCCCC--hHHHHHHHHHHHHHhcCCCCCcEEEEEcCCCCCccHHHHHHHHHHHHhcCCCCcEEEccCCChh
Q 012436 271 AIISVAQ-FRPEKA--HPLQLEAFSVALRKLDADLPRPRLQFVGSCRNKSDEERLQSLKDKSIELKVDGNVEFYKNLLYR 347 (464)
Q Consensus 271 ~i~~~G~-~~~~K~--~~~ll~a~~~l~~~~~~~~p~~~l~i~G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~ 347 (464)
+++..|. ....|. .+...+.++.+.++ +..++++|...+. +..+++.+.........-+.+.|..+-.
T Consensus 183 i~~~~~~~~~~~k~wp~~~~~~L~~~l~~~------~~~ivl~g~~~e~---~~~~~~~~~~~~~~~~~~~~l~g~~sl~ 253 (348)
T d1pswa_ 183 IGFCPGAEFGPAKRWPHYHYAELAKQLIDE------GYQVVLFGSAKDH---EAGNEILAALNTEQQAWCRNLAGETQLD 253 (348)
T ss_dssp EEEECCCTTCGGGSCCHHHHHHHHHHHHHT------TCEEEECCCGGGH---HHHHHHHTTSCHHHHTTEEECTTTSCHH
T ss_pred EEeccccchhhccccchHHHhhhHHHHhhc------CCccccccccchH---HHHHHHHHhhhcccccccccccCCccHH
Confidence 3444443 233343 46677777777664 5688888865432 2333333322111112345677888999
Q ss_pred HHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEe
Q 012436 348 DLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAH 385 (464)
Q Consensus 348 ~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~ 385 (464)
|+..+++.||++|.+. +..+--|.++|+|+|+-
T Consensus 254 el~~li~~a~l~I~~D-----tg~~HlAaa~g~p~i~l 286 (348)
T d1pswa_ 254 QAVILIAACKAIVTND-----SGLMHVAAALNRPLVAL 286 (348)
T ss_dssp HHHHHHHTSSEEEEES-----SHHHHHHHHTTCCEEEE
T ss_pred HHHHHHhcceeEeecC-----ccHHHHHHHcCCCEEEE
Confidence 9999999999999773 33567899999999985
|
| >d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Glycogen phosphorylase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=97.94 E-value=0.0011 Score=65.25 Aligned_cols=191 Identities=13% Similarity=0.091 Sum_probs=131.5
Q ss_pred HHHHHhhcCCEEEEcCHHHHHHHHHHhC-----C-CCCeEEecCCCCCCCCccCC-------------------------
Q 012436 214 MYGLVGSCADLAMVNSSWTQSHIEKLWG-----I-PDRIKRVYPPCDTSGLQVLP------------------------- 262 (464)
Q Consensus 214 ~~~~~~~~ad~vi~~S~~~~~~~~~~~~-----~-~~~i~~i~~~~d~~~~~~~~------------------------- 262 (464)
|...++..+..+-.+|+-..+.+++.+. . +.++.-+-||+....+....
T Consensus 430 Ma~Lal~~S~~vNGVSklH~ev~~~~~~~~~~~~~p~ki~~iTNGV~~rrWl~~~np~L~~l~~~~ig~~w~~d~~~l~~ 509 (824)
T d2gj4a1 430 MAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRK 509 (824)
T ss_dssp HHHHHHHTCSCEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGGG
T ss_pred HHHHHHHhchhHHHHHHHHHHHHHHhhccccccCCCcceecccCcccCccchhccCHHHHHHHHhhhccccccCHHHHHH
Confidence 5566788889999999998888876431 1 56888999999877653100
Q ss_pred ----------------------------------CCCCCCCcEEEEEeccCCCCChHH----HHHHHHHHHHHhcCCCCC
Q 012436 263 ----------------------------------LERSTEYPAIISVAQFRPEKAHPL----QLEAFSVALRKLDADLPR 304 (464)
Q Consensus 263 ----------------------------------~~~~~~~~~i~~~G~~~~~K~~~~----ll~a~~~l~~~~~~~~p~ 304 (464)
....++..+++++-|+...|...+ ++..+.++++.......+
T Consensus 510 l~~~~~d~~~~~~~~~~k~~~K~~L~~~i~~~~g~~ldp~~lfd~~arRfheYKRq~Ln~~~i~~ly~rlk~~~~~~~~P 589 (824)
T d2gj4a1 510 LLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVP 589 (824)
T ss_dssp GGGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCC
T ss_pred HHHhCCCHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCcchhhhhheeechhhhhhhhhHhhHHHHHHHhhhcccCCCCC
Confidence 000156688999999999999887 334445665543222236
Q ss_pred cEEEEEcCCCCCccHHHHHHHHHHHHhc----C----C--CCcEEEccCCChhHHHHHHhcCcEEEEcCC--CCCCChHH
Q 012436 305 PRLQFVGSCRNKSDEERLQSLKDKSIEL----K----V--DGNVEFYKNLLYRDLVKLLGGAVVGIHSMI--DEHFGISV 372 (464)
Q Consensus 305 ~~l~i~G~~~~~~~~~~~~~l~~~~~~~----~----l--~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~--~e~~~~~~ 372 (464)
+++++.|...... ..-+++.+++.++ + + ..+|.|+...+-.-...+++.||+-+..|. .|..|++-
T Consensus 590 ~q~IFaGKAhP~d--~~gK~iIk~I~~va~~in~dp~~~~~lkVvFlenY~v~lA~~li~g~Dvwln~p~~~~EASGTSg 667 (824)
T d2gj4a1 590 RTVMIGGKAAPGY--HMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGN 667 (824)
T ss_dssp EEEEEECCCCTTC--HHHHHHHHHHHHHHHHHTTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHH
T ss_pred eEEEEeCCCCCcc--HHHHHHHHHHHHHHHHHhcChhhccceeEEEcCCCchHHHHHhhhhhhhhhcCCCCCcccCCcch
Confidence 7899999753322 1123333322221 1 1 126899998888888899999999999874 89999999
Q ss_pred HHHHHhCCcEEEeCCCCCccceecccCCccceeecC
Q 012436 373 VEYMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ 408 (464)
Q Consensus 373 ~Ea~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~ 408 (464)
+-+|..|.+.+++--|.. .|+.++ .+++|||++.
T Consensus 668 MK~alNGal~lstlDGwn-vEi~~~-vg~~N~~~fG 701 (824)
T d2gj4a1 668 MKFMLNGALTIGTMDGAN-VEMAEE-AGEENFFIFG 701 (824)
T ss_dssp HHHHHTTCEEEECSCTTH-HHHHHH-HCGGGSEECS
T ss_pred hHHHHcCCeeeccccchH-HHHHHh-cCcccEEEeC
Confidence 999999999999987765 465441 2247888875
|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=97.71 E-value=0.0078 Score=55.93 Aligned_cols=83 Identities=11% Similarity=-0.045 Sum_probs=58.7
Q ss_pred CCcEEEccCCChhHHHHHHhcCcEEEEcCCCCCCChHHHHHHHhCCcEEEeCCCCCccc----eecccCCccceeec---
Q 012436 335 DGNVEFYKNLLYRDLVKLLGGAVVGIHSMIDEHFGISVVEYMAAGAIPIAHNSAGPKMD----IVLEEDGQQTGFLA--- 407 (464)
Q Consensus 335 ~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~~~----~v~~~~~~~~g~~~--- 407 (464)
++||.+.+++|+.++.. ..+++++|.- |...++.||+.+|+|+|+....+--.. +++. -+.|+..
T Consensus 333 ~~nv~~~~w~Pq~~lL~-hp~~~~fVtH----GG~gS~~EAl~~GvP~v~~P~~~DQ~~nA~rv~e~---lG~Gv~l~~~ 404 (471)
T d2vcha1 333 KRGFVIPFWAPQAQVLA-HPSTGGFLTH----CGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSED---IRAALRPRAG 404 (471)
T ss_dssp TTEEEEESCCCHHHHHH-STTEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHT---TCCEECCCCC
T ss_pred CCCeeecccCCHHHHhc-CccCCEEEec----CCccHHHHHHHcCCCEEEcccccccHHHHHHHHHH---heeEEEEecC
Confidence 57899999998876532 1567788833 445689999999999999875533111 1222 2455533
Q ss_pred C----CHHHHHHHHHHHHcCCHH
Q 012436 408 Q----NAEEYADAIVKIISMPET 426 (464)
Q Consensus 408 ~----~~~~la~~i~~l~~~~~~ 426 (464)
+ +.+++.++|.++++ |++
T Consensus 405 ~~~~~t~~~l~~ai~~vl~-~~~ 426 (471)
T d2vcha1 405 DDGLVRREEVARVVKGLME-GEE 426 (471)
T ss_dssp TTSCCCHHHHHHHHHHHHT-STH
T ss_pred CCCcCCHHHHHHHHHHHhC-CcH
Confidence 1 78999999999998 864
|
| >d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Maltodextrin phosphorylase (MALP) species: Escherichia coli [TaxId: 562]
Probab=97.59 E-value=0.0018 Score=63.51 Aligned_cols=193 Identities=13% Similarity=0.083 Sum_probs=128.2
Q ss_pred HHHHHhhcCCEEEEcCHHHHHHHHHHhC-----C-CCCeEEecCCCCCCCCccC--------------------------
Q 012436 214 MYGLVGSCADLAMVNSSWTQSHIEKLWG-----I-PDRIKRVYPPCDTSGLQVL-------------------------- 261 (464)
Q Consensus 214 ~~~~~~~~ad~vi~~S~~~~~~~~~~~~-----~-~~~i~~i~~~~d~~~~~~~-------------------------- 261 (464)
|...+++.+..+-.+|+-..+..++... . +.++.-|-||+....+...
T Consensus 406 Ma~LAl~~S~~vNGVSklH~ev~~~~~~~~~~~~~p~~i~~ITNGVh~~~Wl~~~n~~L~~l~~~~ig~~w~~~~~~l~~ 485 (796)
T d1l5wa_ 406 MANLCVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLIN 485 (796)
T ss_dssp HHHHHHHHSSEEEESSHHHHHHHHHTTSHHHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGG
T ss_pred hHHHHHHhhhhhHHHHHHHHHHHHHHhhhhccccCCcccccccccccHHHHHhhhCHHHHHHHHhhcccccccCHHHHHH
Confidence 4456778899999999999887765331 1 5688889999875433100
Q ss_pred ---------------------------------CCCCCCCCcEEEEEeccCCCCChHHHHHHHHHHHHHhcC----CCCC
Q 012436 262 ---------------------------------PLERSTEYPAIISVAQFRPEKAHPLQLEAFSVALRKLDA----DLPR 304 (464)
Q Consensus 262 ---------------------------------~~~~~~~~~~i~~~G~~~~~K~~~~ll~a~~~l~~~~~~----~~p~ 304 (464)
....+++..+++++-|+..+|...+++.-...+.....+ ...+
T Consensus 486 ~~~~~~d~~~~~~l~~~k~~~K~~L~~~i~~~~g~~ldp~~LtigfaRRfa~YKR~~L~~~~i~~l~~~l~~~~~~~~~P 565 (796)
T d1l5wa_ 486 LEKFADDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVP 565 (796)
T ss_dssp GGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCC
T ss_pred HHhccCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccChhhccchhhhhhhhhhcccchhhhHHHHHHHHhcCcccCCCc
Confidence 000125678999999999999988855444433322111 1125
Q ss_pred cEEEEEcCCCCCcc--HHHHHHHHHHHHhcC----C--CCcEEEccCCChhHHHHHHhcCcEEEEcCC--CCCCChHHHH
Q 012436 305 PRLQFVGSCRNKSD--EERLQSLKDKSIELK----V--DGNVEFYKNLLYRDLVKLLGGAVVGIHSMI--DEHFGISVVE 374 (464)
Q Consensus 305 ~~l~i~G~~~~~~~--~~~~~~l~~~~~~~~----l--~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~--~e~~~~~~~E 374 (464)
+++++.|.....+. .+..+.+.+.++..+ + .-+|.|+...+-+-...+++.||+-+..+. .|..|++-+-
T Consensus 566 vq~IfaGKAhP~d~~gK~iIk~I~~va~~in~dp~~~~~~kVVFlenYdv~lA~~lv~g~DVwln~p~~p~EASGTSgMK 645 (796)
T d1l5wa_ 566 RVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMK 645 (796)
T ss_dssp EEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHH
T ss_pred eEEEEcCCCCCchHHHHHHHHHHHHHHHHhcCChhhccceeEEEeCCCchHHHHHHhcccchhhhCCCCCcccCCchHHH
Confidence 88999997543221 122222333332111 1 126999998888888889999999999874 8999999999
Q ss_pred HHHhCCcEEEeCCCCCccceecccCCccceeecC
Q 012436 375 YMAAGAIPIAHNSAGPKMDIVLEEDGQQTGFLAQ 408 (464)
Q Consensus 375 a~a~G~PvI~~~~~~~~~~~v~~~~~~~~g~~~~ 408 (464)
|+..|.+.+++--|.. -|+.++ .+++|||++.
T Consensus 646 aalNG~lnlstlDGw~-vE~~~~-vg~eN~f~fG 677 (796)
T d1l5wa_ 646 LALNGALTVGTLDGAN-VEIAEK-VGEENIFIFG 677 (796)
T ss_dssp HHHTTCEEEECSCTTH-HHHHHH-HCGGGSEECS
T ss_pred HHHcCCeeeecccchH-HHHHHh-cCccceEEec
Confidence 9999999999986765 465431 2257888885
|
| >d1rcua_ c.129.1.1 (A:) Hypothetical protein TM1055 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MCP/YpsA-like superfamily: MCP/YpsA-like family: MoCo carrier protein-like domain: Hypothetical protein TM1055 species: Thermotoga maritima [TaxId: 2336]
Probab=90.10 E-value=3.1 Score=31.79 Aligned_cols=71 Identities=20% Similarity=0.058 Sum_probs=45.8
Q ss_pred hHHHHHHhcCcEEEEcCCCCCCChH--HHHHHHhCCcEEEeCCCCCccceecccC---------CccceeecCCHHHHHH
Q 012436 347 RDLVKLLGGAVVGIHSMIDEHFGIS--VVEYMAAGAIPIAHNSAGPKMDIVLEED---------GQQTGFLAQNAEEYAD 415 (464)
Q Consensus 347 ~~~~~~l~~ad~~v~ps~~e~~~~~--~~Ea~a~G~PvI~~~~~~~~~~~v~~~~---------~~~~g~~~~~~~~la~ 415 (464)
+....++..||++|... .++|.- ++|++..++|+|.-+..+.+.+.+.+.. .-..-.+++|++++.+
T Consensus 88 ~Rk~~m~~~sda~I~lP--GG~GTl~El~~a~~l~KPiilln~~g~w~~~i~~~~~~~~~i~~~~~~~i~~~~~~ee~~~ 165 (170)
T d1rcua_ 88 MRSFVLLRNADVVVSIG--GEIGTAIEILGAYALGKPVILLRGTGGWTDRISQVLIDGKYLDNRRIVEIHQAWTVEEAVQ 165 (170)
T ss_dssp HHHHHHHTTCSEEEEES--CCHHHHHHHHHHHHTTCCEEEETTSCHHHHHGGGGCBTTTBSSTTCCSCEEEESSHHHHHH
T ss_pred hhHHHHhhcccceeeec--cccchHHHHHHHHHhCCceEEecCCCchHHHHHHHHHHCCCCCHHHcCeEEEeCCHHHHHH
Confidence 45556678999887642 455544 6899999999999876655445443200 0112234568888888
Q ss_pred HHHH
Q 012436 416 AIVK 419 (464)
Q Consensus 416 ~i~~ 419 (464)
.|++
T Consensus 166 ~l~~ 169 (170)
T d1rcua_ 166 IIEQ 169 (170)
T ss_dssp HHHT
T ss_pred HHHc
Confidence 7765
|
| >d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: 10-formyltetrahydrofolate dehydrogenase domain 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.21 E-value=1.1 Score=35.55 Aligned_cols=27 Identities=11% Similarity=0.065 Sum_probs=20.8
Q ss_pred ceEEEecCCCCCCCCcchhhHHHHHHhhhhCCCCc
Q 012436 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLD 69 (464)
Q Consensus 35 mkI~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~~~ 69 (464)
|||+|+ |...+.....+.|.+.||++.
T Consensus 1 MkI~~~--------G~~~~~~~~l~~L~~~~~~i~ 27 (203)
T d2bw0a2 1 MKIAVI--------GQSLFGQEVYCHLRKEGHEVV 27 (203)
T ss_dssp CEEEEE--------CCHHHHHHHHHHHHHTTCEEE
T ss_pred CEEEEE--------cCCHHHHHHHHHHHHCCCcEE
Confidence 899998 556677788899999986543
|
| >d1b74a1 c.78.2.1 (A:1-105) Glutamate racemase {Aquifex pyrophilus [TaxId: 2714]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ATC-like superfamily: Aspartate/glutamate racemase family: Aspartate/glutamate racemase domain: Glutamate racemase species: Aquifex pyrophilus [TaxId: 2714]
Probab=83.06 E-value=2.3 Score=29.35 Aligned_cols=36 Identities=11% Similarity=-0.152 Sum_probs=21.0
Q ss_pred HHHHHhhhcCCcEEEeccccccc--ch-hhhccCceEEE
Q 012436 131 LSWEALCKFTPLYYFDTSGYAFT--YP-LARIFGCRVIC 166 (464)
Q Consensus 131 ~~~~~l~~~~~Dvv~~~~~~~~~--~~-~~~~~~~p~v~ 166 (464)
...+.+.+.++|+++..++.... +. +....++|++-
T Consensus 53 ~~~~~l~~~~~~~iViACNTaS~~al~~lr~~~~~PiiG 91 (105)
T d1b74a1 53 ECAGFLKDKGVDIIVVACNTASAYALERLKKEINVPVFG 91 (105)
T ss_dssp HHHHHHHTTTCSEEEECCHHHHHHHHHHHHHHSSSCEEE
T ss_pred HHHHHHHHcCCCEEEEecCcHHHHHHHHHHHHCCCCEEE
Confidence 34456777899977743332222 22 44466788775
|