Citrus Sinensis ID: 012467
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 463 | 2.2.26 [Sep-21-2011] | |||||||
| Q40588 | 578 | L-ascorbate oxidase OS=Ni | N/A | no | 0.982 | 0.787 | 0.745 | 0.0 | |
| P37064 | 552 | L-ascorbate oxidase OS=Cu | N/A | no | 0.978 | 0.820 | 0.698 | 0.0 | |
| P24792 | 579 | L-ascorbate oxidase OS=Cu | N/A | no | 0.969 | 0.775 | 0.704 | 0.0 | |
| P14133 | 587 | L-ascorbate oxidase OS=Cu | N/A | no | 0.963 | 0.759 | 0.720 | 0.0 | |
| Q1PDH6 | 566 | Laccase-16 OS=Arabidopsis | no | no | 0.894 | 0.731 | 0.316 | 1e-42 | |
| Q8RYM9 | 562 | Laccase-2 OS=Oryza sativa | no | no | 0.889 | 0.733 | 0.3 | 2e-41 | |
| Q9FLB5 | 565 | Laccase-12 OS=Arabidopsis | no | no | 0.842 | 0.690 | 0.305 | 5e-41 | |
| Q5N9X2 | 579 | Laccase-4 OS=Oryza sativa | no | no | 0.885 | 0.708 | 0.306 | 2e-40 | |
| Q0DHL5 | 540 | Putative laccase-11 OS=Or | no | no | 0.894 | 0.766 | 0.314 | 6e-40 | |
| Q00624 | 555 | L-ascorbate oxidase homol | N/A | no | 0.876 | 0.731 | 0.262 | 2e-37 |
| >sp|Q40588|ASO_TOBAC L-ascorbate oxidase OS=Nicotiana tabacum GN=AAO PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 717 bits (1850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/456 (74%), Positives = 381/456 (83%), Gaps = 1/456 (0%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGL 67
+AGTYFYHGH GMQRSAGLYGSLIV+V +GEKEPFHYDGEFNLLLSDWWH+ HEQEV L
Sbjct: 124 KAGTYFYHGHYGMQRSAGLYGSLIVEVGEGEKEPFHYDGEFNLLLSDWWHKGSHEQEVDL 183
Query: 68 SSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYR 127
SS PLRWIGEPQTLL+NGRGQ+NCSLAA FS QCKLRG EQ APQIL V+PNK YR
Sbjct: 184 SSNPLRWIGEPQTLLLNGRGQYNCSLAARFSKPPLPQCKLRGGEQYAPQILRVRPNKIYR 243
Query: 128 LRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYN 187
LR+ASTTAL SL+LA+ HKMVVVEADGNYVQPF V DMDIYSGESYSVL T+QDP+ N
Sbjct: 244 LRVASTTALGSLSLAIGGHKMVVVEADGNYVQPFSVQDMDIYSGESYSVLFKTDQDPTKN 303
Query: 188 YWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMG 247
YWIS VRGR+P TP LTLLNY P SASK P PPPI P W+DY+HSKSFSNKIFALMG
Sbjct: 304 YWISINVRGREPKTPQGLTLLNYLPNSASKFPTLPPPIAPLWNDYNHSKSFSNKIFALMG 363
Query: 248 SPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPE 307
SPKPP HRR+ LLNTQN I+G+TKWAINNVSL LP YLGSI+YG+ +AFD PP+
Sbjct: 364 SPKPPPQNHRRIILLNTQNKIDGYTKWAINNVSLVLPTQLYLGSIRYGI-NAFDTKPPPD 422
Query: 308 NFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFW 367
NF +YDV+K N+N+T G+GVYML NTT+D+ILQNANA+ ++SEIHPWHLHGHDFW
Sbjct: 423 NFPKDYDVLKQAPNSNSTYGNGVYMLKFNTTIDIILQNANALAKDVSEIHPWHLHGHDFW 482
Query: 368 VLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHI 427
VLG GEGKF+++D KKFNLKNPPL+NTAVIFP+GWTALRFV DNPG WAFHCHIEPH H+
Sbjct: 483 VLGYGEGKFSEKDVKKFNLKNPPLRNTAVIFPFGWTALRFVTDNPGVWAFHCHIEPHLHM 542
Query: 428 GMGVVLALGVETVGNIPNQALACGLTGKRFMNPKQN 463
GMGV+ A GV V IP +ALACGLTGK M+ K N
Sbjct: 543 GMGVIFAEGVHLVKKIPKEALACGLTGKMLMSNKHN 578
|
May be involved in a redox system involving ascorbic acid. Nicotiana tabacum (taxid: 4097) EC: 1EC: .EC: 1EC: 0EC: .EC: 3EC: .EC: 3 |
| >sp|P37064|ASO_CUCPM L-ascorbate oxidase OS=Cucurbita pepo var. melopepo PE=1 SV=1 | Back alignment and function description |
|---|
Score = 686 bits (1771), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/454 (69%), Positives = 371/454 (81%), Gaps = 1/454 (0%)
Query: 10 GTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSS 69
GT+FYHGHLGMQRSAGLYGSLIVD G+KEPFHYDGE NLLLSDWWH+S+H+QEVGLSS
Sbjct: 99 GTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPFHYDGEINLLLSDWWHQSIHKQEVGLSS 158
Query: 70 RPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLR 129
+P+RWIGEPQT+L+NGRGQF+CS+AA + + + E CKL+G+E CAP I HV P KTYR+R
Sbjct: 159 KPIRWIGEPQTILLNGRGQFDCSIAAKY-DSNLEPCKLKGSESCAPYIFHVSPKKTYRIR 217
Query: 130 IASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYW 189
IASTTALA+LN A+ NH+++VVEADGNYVQPF D+DIYSGESYSVL+TT+Q+PS NYW
Sbjct: 218 IASTTALAALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYW 277
Query: 190 ISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSP 249
+S G R R P TPP LTLLNY P S SK+P SPPP TP WDD+D SK+F+ +I A MGSP
Sbjct: 278 VSVGTRARHPNTPPGLTLLNYLPNSVSKLPTSPPPQTPAWDDFDRSKNFTYRITAAMGSP 337
Query: 250 KPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENF 309
KPP F+RR+ LLNTQN ING+ KWAIN+VSL LPPTPYLG++KY L AFDQN PPE F
Sbjct: 338 KPPVKFNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVF 397
Query: 310 SNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVL 369
+YD+ PP N T +G+GVY + VDVILQNAN ++ NLSE HPWHLHGHDFWVL
Sbjct: 398 PEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVL 457
Query: 370 GRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGM 429
G G+GKF+ E+E NLKNPPL+NT VIFPYGWTA+RFVADNPG WAFHCHIEPH H+GM
Sbjct: 458 GYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGM 517
Query: 430 GVVLALGVETVGNIPNQALACGLTGKRFMNPKQN 463
GVV A GVE VG IP +ALACG T K +N +N
Sbjct: 518 GVVFAEGVEKVGRIPTKALACGGTAKSLINNPKN 551
|
May be involved in a redox system involving ascorbic acid. Cucurbita pepo var. melopepo (taxid: 3665) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 3 |
| >sp|P24792|ASO_CUCMA L-ascorbate oxidase OS=Cucurbita maxima GN=AAO PE=1 SV=2 | Back alignment and function description |
|---|
Score = 684 bits (1765), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/450 (70%), Positives = 369/450 (82%), Gaps = 1/450 (0%)
Query: 10 GTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSS 69
GT+FYHGHLGMQRSAGLYGSLIVD G+KEPFHYDGE NLLLSDWWH+S+H+QEVGLSS
Sbjct: 129 GTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPFHYDGEINLLLSDWWHQSIHKQEVGLSS 188
Query: 70 RPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLR 129
+P+RWIGEPQT+L+NGRGQF+CS+AA + + + E CKL+G+E CAP I HV P KTYR+R
Sbjct: 189 KPIRWIGEPQTILLNGRGQFDCSIAAKY-DSNLEPCKLKGSEPCAPYIFHVMPKKTYRIR 247
Query: 130 IASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYW 189
IASTTALA+LN A+ NH ++VVEADGNYVQPF D+DIYSGESYSVL+TT+Q+PS NYW
Sbjct: 248 IASTTALAALNFAIGNHPLLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYW 307
Query: 190 ISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSP 249
+S G RGR P TPP LTLLNY P S SK+P SPPP TP WDD+D SK+F+ +I A MGSP
Sbjct: 308 VSVGTRGRHPNTPPGLTLLNYLPNSVSKLPTSPPPETPAWDDFDRSKNFTYRITAAMGSP 367
Query: 250 KPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENF 309
KPP +RR+ LLNTQN ING+ KWAIN+VSL LPPTPYLG++K+ L AFDQN PPE F
Sbjct: 368 KPPVKSNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKFNLLHAFDQNPPPEVF 427
Query: 310 SNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVL 369
+YD+ PP N T +G+GVY + VDVILQNAN ++ NLSEIHPWHLHGHDFWVL
Sbjct: 428 PEDYDIDTPPTNEKTKIGNGVYQFKIGEIVDVILQNANMMKENLSEIHPWHLHGHDFWVL 487
Query: 370 GRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGM 429
G G+GKFT E+E NLKNPPL+NT VIFPYGWTA+RFVADNPG WAFHCHIEPH H+GM
Sbjct: 488 GYGDGKFTAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGM 547
Query: 430 GVVLALGVETVGNIPNQALACGLTGKRFMN 459
GVV A GVE VG IP +ALACG T K +N
Sbjct: 548 GVVFAEGVEKVGRIPTKALACGGTAKSLIN 577
|
May be involved in a redox system involving ascorbic acid. Cucurbita maxima (taxid: 3661) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 3 |
| >sp|P14133|ASO_CUCSA L-ascorbate oxidase OS=Cucumis sativus PE=1 SV=1 | Back alignment and function description |
|---|
Score = 683 bits (1763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/448 (72%), Positives = 370/448 (82%), Gaps = 2/448 (0%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGL 67
+AGTYFYHGHLGMQRSAGLYGSLIVD +G EPFHYD E NLLLSDWWH+SVH+QEVGL
Sbjct: 132 KAGTYFYHGHLGMQRSAGLYGSLIVDPPEGRSEPFHYDEEINLLLSDWWHQSVHKQEVGL 191
Query: 68 SSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYR 127
SS+P+RWIGEPQ++LING+GQF+CS+AA ++ G +QC+L G E+CAP ILHVQP KTYR
Sbjct: 192 SSKPMRWIGEPQSILINGKGQFDCSIAAKYNQG-LKQCELSGKEKCAPFILHVQPKKTYR 250
Query: 128 LRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYN 187
+RIASTTALASLN A+ NH+++VVEADGNYVQPF D+DIYSGESYSVL+TT+Q+P N
Sbjct: 251 IRIASTTALASLNFAIGNHELLVVEADGNYVQPFVTSDIDIYSGESYSVLITTDQNPLEN 310
Query: 188 YWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMG 247
YW+S GVR R P TPP LTLLNY P SASK+P+SPPP TP W+D+D SK+F+ +IFA MG
Sbjct: 311 YWVSIGVRARLPKTPPGLTLLNYLPNSASKLPISPPPETPHWEDFDRSKNFTFRIFAAMG 370
Query: 248 SPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPE 307
SPKPP ++RRL LLNTQN INGF KWAINNVSL LPPTPYL ++K L AF+QN PPE
Sbjct: 371 SPKPPVRYNRRLFLLNTQNRINGFMKWAINNVSLALPPTPYLAAMKMRLNTAFNQNPPPE 430
Query: 308 NFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFW 367
F YD+ PP N TT G+GVY + TVDVILQNAN + PN+SEIHPWHLHGHDFW
Sbjct: 431 TFPLNYDINNPPPNPETTTGNGVYKFNMGETVDVILQNANMLNPNMSEIHPWHLHGHDFW 490
Query: 368 VLGRGEGKF-TKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFH 426
VLG GEGKF EDEKK NLKNPPL+NT VIFPYGWTA+RFVADNPG WAFHCHIEPH H
Sbjct: 491 VLGYGEGKFYAPEDEKKLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLH 550
Query: 427 IGMGVVLALGVETVGNIPNQALACGLTG 454
+GMGVV A GV VG IP +ALACG T
Sbjct: 551 MGMGVVFAEGVHMVGMIPPKALACGSTA 578
|
May be involved in a redox system involving ascorbic acid. Cucumis sativus (taxid: 3659) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 3 |
| >sp|Q1PDH6|LAC16_ARATH Laccase-16 OS=Arabidopsis thaliana GN=LAC16 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 174 bits (441), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 146/462 (31%), Positives = 216/462 (46%), Gaps = 48/462 (10%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYD-GEFNLLLSDWWHRSVHEQEVG 66
Q GT ++H H+ R A ++G++++ G PF E ++LS+WW V E+ +
Sbjct: 122 QRGTLWWHAHILWLR-ATVHGAIVILPKLGVPYPFPKPYKEKTIVLSEWWKSDV-EELIN 179
Query: 67 LSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTY 126
+SR ING +GS C + + L V+ KTY
Sbjct: 180 EASRIGTAPSASDAHTINGH------------SGSISNCPSQSSYG-----LPVRAGKTY 222
Query: 127 RLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSY 186
LRI + L + H + VVE D Y +P++ D + I G++ +VLLT N +
Sbjct: 223 MLRIINAALNEELFFKIAGHVLTVVEVDAVYTKPYKTDTVFIAPGQTTNVLLTANANAGS 282
Query: 187 NYWISAGV---------RGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKS 237
NY ++A AT + + TS + S PP W ++S
Sbjct: 283 NYMVAATTFTDAHIPYDNVTATATLHYIGHTSTVSTSKKTVLASLPPQNATWVATKFTRS 342
Query: 238 FSNKIFALMGSPKPPTNFHRRLTLLN------TQNTINGFTKWA-INNVSLTLPPTPYLG 290
+ + +L + PT L Q+ NG A INNV+ T+P T L
Sbjct: 343 LRS-LNSLEYPARVPTTVEHSLFFTVGLGANPCQSCNNGVRLVAGINNVTFTMPKTALLQ 401
Query: 291 SIKYGLKDAFDQNGPPENFSNEYDVMKPP---VNANTTLGSGVYMLGLNTTVDVILQNAN 347
+ + + F + P + SN YD P VNA T G+ +Y L N TV ++LQN
Sbjct: 402 AHFFNISGVFTDDFPAKP-SNPYDYTAPVKLGVNAATMKGTKLYRLPYNATVQIVLQNTA 460
Query: 348 AIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKE-DEKKFNLKNPPLKNTAVIFPYGWTALR 406
I LS+ HP+HLHG +F+ +GRG G F E D K FNL +P +NT + GWTA+R
Sbjct: 461 MI---LSDNHPFHLHGFNFFEVGRGLGNFNPEKDPKAFNLVDPVERNTVGVPAGGWTAIR 517
Query: 407 FVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQAL 448
F+ADNPG W HCH+E H G+ +A V+ G+ P+Q+L
Sbjct: 518 FIADNPGVWFMHCHLE--LHTTWGLKMAFVVDN-GHGPDQSL 556
|
Lignin degradation and detoxification of lignin-derived products. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q8RYM9|LAC2_ORYSJ Laccase-2 OS=Oryza sativa subsp. japonica GN=LAC2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 138/460 (30%), Positives = 219/460 (47%), Gaps = 48/460 (10%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPF-HYDGEFNLLLSDWWHRSVHEQEVG 66
Q GT ++H H+ R A ++G++++ A G PF D E ++L +WWH V E
Sbjct: 122 QRGTLWWHAHIAWMR-ATVHGAIVILPAAGVPYPFPKPDDEAEIVLGEWWHADVETVE-- 178
Query: 67 LSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTY 126
R +G + AH NG +E+ L VQ KTY
Sbjct: 179 ---RQGSMLGMAPNMS-----------DAHTINGKPGPLVPFCSEKHT-YALQVQSGKTY 223
Query: 127 RLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSY 186
LRI + L ++ H M VVE D Y +PF + + G++ +VL++ +Q P
Sbjct: 224 LLRIINAAVNDELFFSIAGHNMTVVEIDATYTKPFAASTVQLSPGQTMNVLVSADQSPG- 282
Query: 187 NYWISAGVRGRKPA---TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIF 243
Y++ A P A +L Y S +P + P P + +F +K+
Sbjct: 283 RYFMVAKPFNDVPIPADNKTATAILQYAGVPTSVVP-ALPQTMPATNSTGSVAAFHDKLR 341
Query: 244 ALMGSPKPPTNF------HRRLTL---LNTQNTINGFTKWA--INNVSLTLPPTPYLGSI 292
+L SP+ P + H T+ ++ T ++ A +NN++ +P T L +
Sbjct: 342 SL-NSPRYPADVPLAVDRHLLYTIGLNIDPCETCLNRSRLAASLNNITFVMPRTALLQAH 400
Query: 293 KYGLKDAFDQN---GPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAI 349
YG K F + PP F+ Y + T+LG+ + + N TV+++LQ+ N +
Sbjct: 401 YYGQKGVFAADFPDRPPARFN--YTGVPLTAGLGTSLGTRLSKIAYNATVELVLQDTNLL 458
Query: 350 RPNLSEIHPWHLHGHDFWVLGRGEGKFT-KEDEKKFNLKNPPLKNTAVIFPYGWTALRFV 408
E HP+HLHG++F+V+GRG G F +D K+NL +PP +NT + GWTA+RF
Sbjct: 459 S---VESHPFHLHGYNFFVVGRGVGNFDPAKDPAKYNLVDPPERNTVGVPAGGWTAIRFR 515
Query: 409 ADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQAL 448
ADNPG W HCH+E H G+ +A VE G+ P++++
Sbjct: 516 ADNPGVWFLHCHLE--VHTSWGLKMAFLVED-GSGPDESV 552
|
Lignin degradation and detoxification of lignin-derived products. Oryza sativa subsp. japonica (taxid: 39947) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9FLB5|LAC12_ARATH Laccase-12 OS=Arabidopsis thaliana GN=LAC12 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 169 bits (427), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 144/472 (30%), Positives = 214/472 (45%), Gaps = 82/472 (17%)
Query: 6 QVQAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPF-HYDGEFNLLLSDWWHRSVHEQE 64
Q Q GT ++H H R A +YG+LI+ G PF D + L+L +WW+
Sbjct: 118 QGQEGTLWWHAHSSWLR-ATVYGALIIHPTPGSSFPFPKPDRQTALMLGEWWN----ANP 172
Query: 65 VGLSSRPLRWIGEP---QTLLINGR--GQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILH 119
V + ++ R P ING+ +NCS ++
Sbjct: 173 VDVINQATRTGAAPNISDAYTINGQPGDLYNCSTKETV-------------------VVP 213
Query: 120 VQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLT 179
+ +T LR+ + L V NHK+ VV AD +Y++PF + + G++ VLLT
Sbjct: 214 INSGETSLLRVINAALNQPLFFTVANHKLTVVGADASYLKPFTTKVLMLGPGQTTDVLLT 273
Query: 180 TNQDPSYNYWISAGVRGRKPATP----PALTLLNYHPTSASKIPLSPPPITPRWDDYDHS 235
+Q P Y+I+A P +L Y T+ + P+ P + P ++D +
Sbjct: 274 ADQPPK-RYYIAARAYQSAQNAPFDNTTTTAILQYKKTTTTSKPIMP--VLPAFNDTNTV 330
Query: 236 KSFSNKIFALMGSPKPPT--------------NFHRRLTLLNTQNTING--FTKWAINNV 279
SFS K +L P T N ++ Q +NG FT ++NNV
Sbjct: 331 TSFSRKFKSLRNVVVPKTIDDNLFFTIGLGLDNCPKKFPKSRCQG-LNGTRFTA-SMNNV 388
Query: 280 SLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTT------------LG 327
S LP + L A NG P F+ ++ KPPV + T G
Sbjct: 389 SFVLPS-------NFSLLQA-HSNGIPGVFTTDFP-SKPPVKFDYTGNNISRALFQPVKG 439
Query: 328 SGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFT-KEDEKKFNL 386
+ +Y L + V V+LQ+ N + SE HP HLHG+DF+++G G G F K+D KFNL
Sbjct: 440 TKLYKLKYGSRVQVVLQDTNIVT---SENHPIHLHGYDFYIVGEGFGNFNPKKDTSKFNL 496
Query: 387 KNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVE 438
+PPL+NT + GW +RFVADNPG W HCH++ HI G+ +A V+
Sbjct: 497 VDPPLRNTVAVPVNGWAVIRFVADNPGVWLMHCHLD--VHIKWGLAMAFLVD 546
|
Lignin degradation and detoxification of lignin-derived products. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q5N9X2|LAC4_ORYSJ Laccase-4 OS=Oryza sativa subsp. japonica GN=LAC4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 146/477 (30%), Positives = 219/477 (45%), Gaps = 67/477 (14%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHY-DGEFNLLLSDWWHRSVHEQEVG 66
Q GT ++H H+ R A +YG+L++ G PF E ++ +WW+ E
Sbjct: 124 QRGTLWWHAHISWLR-ATVYGALVILPKLGVPYPFPAPHKEVPVIFGEWWNADTEE---- 178
Query: 67 LSSRPLRWIGEPQT---LLINGRGQ--FNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQ 121
+ ++ ++ G P ING +NCS F L V+
Sbjct: 179 VVNQAVQTGGGPNVSDAFTINGLPGPLYNCSAQDTFK-------------------LKVK 219
Query: 122 PNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTN 181
P KTY LR+ + L AV NH + VVE D YV+PF VD + I G++ +VLLT
Sbjct: 220 PGKTYMLRLINAALNEELFFAVANHTLTVVEVDAVYVKPFTVDTLVISPGQTTNVLLTAK 279
Query: 182 -QDPSYNYWISAG-VRGRKPATPPALT---LLNYH-----PTSASKIPLSP--PPITPRW 229
P N+++SA +P T T +L Y P++AS + P P P+
Sbjct: 280 PYYPGANFYMSAAPYSTARPGTFGNTTVAGILEYENPAMSPSAASFVKGLPLFKPTLPQL 339
Query: 230 DDYDHSKSFSNKIFALMGSPKP---PTNFHRRLTL------------LNTQNTINGFTKW 274
+D D +F++K+ +L P P + +R + Q N
Sbjct: 340 NDTDFVTNFTDKLRSLATPEYPAAVPQSVDKRFFFTVGLGTLPCPANMTCQGPNNTQMAA 399
Query: 275 AINNVSLTLPPTPYLGSIKYGLKD-AFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYML 333
++NNVS LP L S GL + + P S PP N N G+ + +L
Sbjct: 400 SMNNVSFVLPARALLQSHFTGLSSGVYAPDFPVAPLSPFNYTGTPPNNTNVKTGTKLLVL 459
Query: 334 GLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTK-EDEKKFNLKNPPLK 392
NT+V++++Q+ + + E HP HLHG +F+V+G+G G + D KFNL +P +
Sbjct: 460 RYNTSVELVMQDTSILG---IESHPLHLHGFNFFVIGQGFGNYDAVNDPAKFNLVDPVER 516
Query: 393 NTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVV-LALGVETVGNIPNQAL 448
NT + GW A+RF+ADNPG W HCH+E H G+ + L L G+ PNQ L
Sbjct: 517 NTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLVLD----GSHPNQKL 569
|
Lignin degradation and detoxification of lignin-derived products. Oryza sativa subsp. japonica (taxid: 39947) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q0DHL5|LAC11_ORYSJ Putative laccase-11 OS=Oryza sativa subsp. japonica GN=LAC11 PE=5 SV=2 | Back alignment and function description |
|---|
Score = 165 bits (418), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 148/471 (31%), Positives = 217/471 (46%), Gaps = 57/471 (12%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPF-HYDGEFNLLLSDWWH---RSVHEQ 63
Q GT ++H H R A LYG L++ G PF E LLL +W++ +V +Q
Sbjct: 86 QRGTLWWHAHFSWLR-ATLYGPLVILPPRGVAYPFPKPHREVPLLLGEWFNADPEAVIKQ 144
Query: 64 EVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPN 123
+ P + + T +NCS S + KLR V+P
Sbjct: 145 ALQTGGGPN--VSDAYTFNGLPGPTYNCS-------SSNDTFKLR-----------VRPG 184
Query: 124 KTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTT--N 181
KTY LR+ + L V NH ++VV+AD +YV+PF + I G++ VLLT N
Sbjct: 185 KTYLLRLINAALNDELFFGVANHTLMVVQADASYVKPFAATALVISPGQTMDVLLTAAAN 244
Query: 182 QDPSYNYWISAGVRGRKPAT---PPALTLLNYH--PTSASKIPLSPPPITPRWDDYDHSK 236
PS ++ I+ T A+ +L Y+ TSA+ + P P P ++D
Sbjct: 245 NPPSRSFAIAVAPYTNTVGTFDNTTAVAVLEYYGAATSAAALRSLPLPSLPAYNDTGAVA 304
Query: 237 SFSNKIFALMGSPKP---PTNFHRRLTLL------NTQNTINGF------TKWA--INNV 279
+FS +L + P P R Q+ +NG T++A +NNV
Sbjct: 305 NFSASFRSLASAQYPARVPRTVDRHFFFAVGLGADPCQSPVNGTCQGPNNTRFAASMNNV 364
Query: 280 SLTLPPTPYLGS-IKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTT 338
S +P T L + + N P + PP N T G+ V L NTT
Sbjct: 365 SFVMPRTSLLQAHYQRRYNGVLAANFPAAPRTPFNYTGTPPNNTFVTHGTRVVPLSFNTT 424
Query: 339 VDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKF-TKEDEKKFNLKNPPLKNTAVI 397
V+V+LQ+ + + +E HP HLHG+DF+V+G G G + D K+NL +P +NT +
Sbjct: 425 VEVVLQDTSILG---AESHPLHLHGYDFYVVGTGFGNYDASNDTAKYNLVDPVQRNTISV 481
Query: 398 FPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQAL 448
GW A+RFVADNPG W HCH++ H+ G+ +A V G +PNQ L
Sbjct: 482 PTAGWVAIRFVADNPGVWIMHCHLD--VHLSWGLSMAWLVND-GPLPNQKL 529
|
Lignin degradation and detoxification of lignin-derived products. Oryza sativa subsp. japonica (taxid: 39947) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q00624|ASOL_BRANA L-ascorbate oxidase homolog OS=Brassica napus GN=Bp10 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 156 bits (395), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/461 (26%), Positives = 211/461 (45%), Gaps = 55/461 (11%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHY-DGEFNLLLSDWWHRSVHEQEVG 66
Q G+YFY+ GM R+AG YG L V+ P+ + ++ +L+ DW+ +S + +
Sbjct: 120 QIGSYFYYPTTGMHRAAGGYGGLRVNSRLLIPVPYADPEDDYTVLIGDWYTKSHTQLKKF 179
Query: 67 LSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTY 126
L R IG P ++ING+ +G+ AP + ++P KTY
Sbjct: 180 LDGG--RTIGRPDGIVINGKSG-------------------KGDGSDAP-LFTLKPGKTY 217
Query: 127 RLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSY 186
R+RI + S+N ++NHKM +VE +G++V + D +D++ G+ + ++T NQ+P
Sbjct: 218 RVRICNVGVKTSINFRIQNHKMKLVEMEGSHVLQNDYDSLDVHVGQCFGTIVTANQEPK- 276
Query: 187 NYWISAGVRGRKPATPPALTLLNYHPT---SASKIPLSPPPITPRWDDYDHSKSFSNKIF 243
+Y++ A R K LL Y ++S++P P+ W + +SF +
Sbjct: 277 DYYMVASSRFLKTVI-TTTGLLRYEGGKGPASSQLPAG--PVGWAW-SLNQFRSFRWNLT 332
Query: 244 ALMGSPKPPTNFH-------RRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGL 296
A P P ++H R + L+NTQ ++G ++A+N VS T P TP + +G+
Sbjct: 333 ASAARPNPQGSYHYGKINITRTIKLVNTQGKVDGKLRFALNGVSHTEPETPLKLAEYFGI 392
Query: 297 KDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEI 356
D + + D P N + V + T V+V+ +N +
Sbjct: 393 SDKVFK------YDTITDDPTPEQIKNIKIEPNVLNITHRTFVEVVFENHE------KSV 440
Query: 357 HPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWA 416
WHL G+ F+ + G +T E K +NL + ++T ++P W A+ DN G W
Sbjct: 441 QSWHLDGYSFFSVAVEPGTWTPEKRKNYNLLDAVSRHTVQVYPKCWAAILLTFDNCGMWN 500
Query: 417 FHCHIEPHFHIGMGVVLAL-----GVETVGNIPNQALACGL 452
++G + ++ + N+P +L CGL
Sbjct: 501 VRSENTERRYLGQQLYASVLSPEKSLRDEYNMPETSLQCGL 541
|
Probable oxidase that may be involved in pollen tube growth. Brassica napus (taxid: 3708) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 463 | ||||||
| 225436045 | 581 | PREDICTED: L-ascorbate oxidase-like [Vit | 0.976 | 0.777 | 0.765 | 0.0 | |
| 147844747 | 558 | hypothetical protein VITISV_044128 [Viti | 0.976 | 0.810 | 0.767 | 0.0 | |
| 118488761 | 594 | unknown [Populus trichocarpa] | 0.974 | 0.759 | 0.777 | 0.0 | |
| 224059236 | 566 | predicted protein [Populus trichocarpa] | 0.974 | 0.796 | 0.774 | 0.0 | |
| 224102875 | 597 | l-ascorbate oxidase precursor [Populus t | 0.974 | 0.755 | 0.764 | 0.0 | |
| 255578674 | 589 | l-ascorbate oxidase, putative [Ricinus c | 0.971 | 0.764 | 0.74 | 0.0 | |
| 2493321 | 578 | RecName: Full=L-ascorbate oxidase; Short | 0.982 | 0.787 | 0.745 | 0.0 | |
| 356575058 | 574 | PREDICTED: L-ascorbate oxidase [Glycine | 0.974 | 0.785 | 0.713 | 0.0 | |
| 543859 | 552 | RecName: Full=L-ascorbate oxidase; Short | 0.978 | 0.820 | 0.698 | 0.0 | |
| 2827764 | 579 | RecName: Full=L-ascorbate oxidase; Short | 0.969 | 0.775 | 0.704 | 0.0 |
| >gi|225436045|ref|XP_002275678.1| PREDICTED: L-ascorbate oxidase-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 755 bits (1949), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/452 (76%), Positives = 395/452 (87%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGL 67
+AGTYFYHGH GMQRSAGLYGSL+V+V +G+KEPFHYDGEFNLLLSDWWH+ EQEV L
Sbjct: 125 KAGTYFYHGHYGMQRSAGLYGSLVVEVGEGQKEPFHYDGEFNLLLSDWWHKGSQEQEVAL 184
Query: 68 SSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYR 127
SS+P RWIGEPQTLLINGRGQ+NCSLAAH +N S+ QC+ RGNEQC+PQILHVQP+KTYR
Sbjct: 185 SSKPFRWIGEPQTLLINGRGQYNCSLAAHVTNSSSPQCQFRGNEQCSPQILHVQPHKTYR 244
Query: 128 LRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYN 187
LR++STTALASLNL + NHKMV+VEADGNY+QP VDD+DIYSGESYSVL+ T+QDPS N
Sbjct: 245 LRVSSTTALASLNLQIGNHKMVMVEADGNYIQPVAVDDLDIYSGESYSVLIHTDQDPSKN 304
Query: 188 YWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMG 247
YWIS VRGR+P TP LT+LNY TSASK+P S PP++P W+DY+HSKSFSNKI ALMG
Sbjct: 305 YWISVSVRGREPKTPQGLTILNYQTTSASKLPTSTPPVSPLWNDYNHSKSFSNKILALMG 364
Query: 248 SPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPE 307
SPKPPT ++RR+ LLNTQNTINGFTKWAINN+SLTLPPTPYLG+IK+ L +AFDQ PPE
Sbjct: 365 SPKPPTTYNRRIILLNTQNTINGFTKWAINNISLTLPPTPYLGAIKHRLSNAFDQKSPPE 424
Query: 308 NFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFW 367
NF N+YDVMKPP N N+T G+GVYML TTVDVILQNANA+ +SEIHPWHLHGHDFW
Sbjct: 425 NFPNDYDVMKPPTNTNSTYGNGVYMLEFRTTVDVILQNANALATGVSEIHPWHLHGHDFW 484
Query: 368 VLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHI 427
VLG GEGKF ++D K+FNLKNPPL+NTAVIFP+GWTALRFVADNPG WAFHCHIEPH H+
Sbjct: 485 VLGYGEGKFREKDAKRFNLKNPPLRNTAVIFPFGWTALRFVADNPGVWAFHCHIEPHLHM 544
Query: 428 GMGVVLALGVETVGNIPNQALACGLTGKRFMN 459
GMGVV A GV V ++PN ALACGLTGK M+
Sbjct: 545 GMGVVFAEGVHLVKDVPNHALACGLTGKMLMS 576
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147844747|emb|CAN82127.1| hypothetical protein VITISV_044128 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 753 bits (1945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/452 (76%), Positives = 394/452 (87%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGL 67
+AGTYFYHGH GMQRSAGLYGSL V+V +G+KEPFHYDGEFNLLLSDWWH+ EQEV L
Sbjct: 102 KAGTYFYHGHYGMQRSAGLYGSLXVEVGEGQKEPFHYDGEFNLLLSDWWHKGSQEQEVAL 161
Query: 68 SSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYR 127
SS+P RWIGEPQTLLINGRGQ+NCSLAAH +N S+ QC+ RGNEQCAPQILHVQP+KTYR
Sbjct: 162 SSKPFRWIGEPQTLLINGRGQYNCSLAAHVTNSSSPQCQFRGNEQCAPQILHVQPHKTYR 221
Query: 128 LRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYN 187
LR++STTALASLNL + NHKMV+VEADGNY+QP VDD+DIYSGESYSVL+ T+QDPS N
Sbjct: 222 LRVSSTTALASLNLQIGNHKMVMVEADGNYIQPVAVDDLDIYSGESYSVLIHTDQDPSXN 281
Query: 188 YWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMG 247
YWIS VRGR+P TP LT+LNY TSASK+P S PP++P W+DY+HSKSFSNKI ALMG
Sbjct: 282 YWISVSVRGREPKTPQGLTILNYQTTSASKLPTSTPPVSPLWNDYNHSKSFSNKILALMG 341
Query: 248 SPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPE 307
SPKPPT ++RR+ LLNTQNTINGFTKWAINN+SLTLPPTPYLG+IK+ L +AFDQ PPE
Sbjct: 342 SPKPPTTYNRRIILLNTQNTINGFTKWAINNISLTLPPTPYLGAIKHRLSNAFDQKSPPE 401
Query: 308 NFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFW 367
NF N+YDVMKPP N N+T G+GVYML TTVDVILQNANA+ +SEIHPWHLHGHDFW
Sbjct: 402 NFPNDYDVMKPPTNTNSTYGNGVYMLEFRTTVDVILQNANALATGVSEIHPWHLHGHDFW 461
Query: 368 VLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHI 427
VLG GEGKF ++D K+FNLKNPPL+NTAVIFP+GWTALRFVADNPG WAFHCHIEPH H+
Sbjct: 462 VLGYGEGKFREKDAKRFNLKNPPLRNTAVIFPFGWTALRFVADNPGVWAFHCHIEPHLHM 521
Query: 428 GMGVVLALGVETVGNIPNQALACGLTGKRFMN 459
GMGVV A GV V ++PN ALACGLTGK M+
Sbjct: 522 GMGVVFAEGVHLVKDVPNHALACGLTGKMLMS 553
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|118488761|gb|ABK96191.1| unknown [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 748 bits (1932), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/453 (77%), Positives = 392/453 (86%), Gaps = 2/453 (0%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGL 67
+AGTYFYHGH GMQRSAGLYGS+IVDVA+GEKEPFHYDGEF+LLLSDWWH+SVH QEVGL
Sbjct: 136 RAGTYFYHGHYGMQRSAGLYGSMIVDVAEGEKEPFHYDGEFDLLLSDWWHKSVHHQEVGL 195
Query: 68 SSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYR 127
SSRP+RWI EPQ LLINGRGQ+ CSLAAH N S QC + G+EQ AP ILHV PNKTYR
Sbjct: 196 SSRPMRWINEPQALLINGRGQYGCSLAAHHGNSSFSQCNITGHEQWAPYILHVDPNKTYR 255
Query: 128 LRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYN 187
+RIASTTALASLNLA+ NHKM+VVEADGNY+QPFE +D+DIYSGESYSVLL T+QD S N
Sbjct: 256 IRIASTTALASLNLAIGNHKMMVVEADGNYLQPFETNDLDIYSGESYSVLLKTSQDSSQN 315
Query: 188 YWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFAL-- 245
YWIS GVRGR+P TP ALT+LNY SASK+PLSPPP+TPRWDDY HSK+FSNKI AL
Sbjct: 316 YWISFGVRGREPHTPQALTILNYKTNSASKLPLSPPPVTPRWDDYAHSKAFSNKIKALDH 375
Query: 246 MGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGP 305
PKP +HRR+ LLNTQN +NG+TKW+INNVSL++P TPYLGSI++GL+DAFDQ P
Sbjct: 376 KSIPKPSPTYHRRIVLLNTQNKMNGYTKWSINNVSLSIPATPYLGSIRFGLRDAFDQTKP 435
Query: 306 PENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHD 365
PE+F YDVMKPPVN NTT GSGVYMLG +TVDVILQNANA+ N+SEIHPWHLHGHD
Sbjct: 436 PEDFPGHYDVMKPPVNPNTTTGSGVYMLGYYSTVDVILQNANALTENVSEIHPWHLHGHD 495
Query: 366 FWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHF 425
FWVLG GEGKFTK DEKKFNLKNPP +NTAVIFPYGWTALRFVADNPG WAFHCHIEPH
Sbjct: 496 FWVLGYGEGKFTKSDEKKFNLKNPPYRNTAVIFPYGWTALRFVADNPGVWAFHCHIEPHL 555
Query: 426 HIGMGVVLALGVETVGNIPNQALACGLTGKRFM 458
H+GMGVV A GV+ V IP +AL+CGLTGKRFM
Sbjct: 556 HLGMGVVFAEGVQHVAKIPKEALSCGLTGKRFM 588
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224059236|ref|XP_002299782.1| predicted protein [Populus trichocarpa] gi|222847040|gb|EEE84587.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 745 bits (1924), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/453 (77%), Positives = 391/453 (86%), Gaps = 2/453 (0%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGL 67
+AGTYFYHGH GMQRSAGLYGS+IVDVA+GEKEPFHYDGEF+LLLSDWWH+SVH QEVGL
Sbjct: 108 RAGTYFYHGHYGMQRSAGLYGSMIVDVAEGEKEPFHYDGEFDLLLSDWWHKSVHHQEVGL 167
Query: 68 SSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYR 127
SSRP+RWI EPQ LLINGRGQ+ CSLAAH N S QC + G+EQ AP ILHV PNKTYR
Sbjct: 168 SSRPMRWINEPQALLINGRGQYGCSLAAHHGNSSFSQCNITGHEQWAPYILHVDPNKTYR 227
Query: 128 LRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYN 187
+RIASTTALASLNLA+ NHKM+VVEADGNY+QPFE +D+DIYSGESYSVLL T+QD S N
Sbjct: 228 IRIASTTALASLNLAIGNHKMMVVEADGNYLQPFETNDLDIYSGESYSVLLKTSQDSSQN 287
Query: 188 YWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFAL-- 245
YWIS GVRGR+P TP ALT+LNY SASK+PLSPPP+TPRWDDY HSK+FSNKI AL
Sbjct: 288 YWISFGVRGREPHTPQALTILNYKTNSASKLPLSPPPVTPRWDDYAHSKAFSNKIKALDH 347
Query: 246 MGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGP 305
PKP +HRR+ LLNTQN +NG+TKW+INNVSL++P TPYLGSI++GL+ AFDQ P
Sbjct: 348 KSIPKPSPTYHRRIVLLNTQNKMNGYTKWSINNVSLSIPATPYLGSIRFGLRGAFDQTKP 407
Query: 306 PENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHD 365
PE+F YDVMKPPVN NTT GSGVYMLG +TVDVILQNANA+ N+SEIHPWHLHGHD
Sbjct: 408 PEDFPGHYDVMKPPVNPNTTTGSGVYMLGYYSTVDVILQNANALTENVSEIHPWHLHGHD 467
Query: 366 FWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHF 425
FWVLG GEGKFTK DEKKFNLKNPP +NTAVIFPYGWTALRFVADNPG WAFHCHIEPH
Sbjct: 468 FWVLGYGEGKFTKSDEKKFNLKNPPYRNTAVIFPYGWTALRFVADNPGVWAFHCHIEPHL 527
Query: 426 HIGMGVVLALGVETVGNIPNQALACGLTGKRFM 458
H+GMGVV A GV+ V IP +AL+CGLTGKRFM
Sbjct: 528 HLGMGVVFAEGVQHVAKIPKEALSCGLTGKRFM 560
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224102875|ref|XP_002312838.1| l-ascorbate oxidase precursor [Populus trichocarpa] gi|222849246|gb|EEE86793.1| l-ascorbate oxidase precursor [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 741 bits (1914), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/454 (76%), Positives = 397/454 (87%), Gaps = 3/454 (0%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGL 67
+AGTYFYHGH GMQRSAGLYGSLIVDVA+GEKEPFHYDGEF+LLLSDWWH S H QEVGL
Sbjct: 138 RAGTYFYHGHYGMQRSAGLYGSLIVDVAEGEKEPFHYDGEFDLLLSDWWHESAHHQEVGL 197
Query: 68 SSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSA-EQCKLRGNEQCAPQILHVQPNKTY 126
SSRP+RWIGEPQTLL+NGRGQ+ CSLAAH+SN S+ QC + G+EQ AP ILHV PNKTY
Sbjct: 198 SSRPMRWIGEPQTLLVNGRGQYGCSLAAHYSNNSSLSQCNVTGHEQWAPYILHVDPNKTY 257
Query: 127 RLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSY 186
R+R++STTALASLNLA+ NHKM+VVEADGNY+QPFE DD+DIYSGESYSVLL T+QDPS
Sbjct: 258 RIRLSSTTALASLNLAIGNHKMLVVEADGNYLQPFETDDLDIYSGESYSVLLKTSQDPSQ 317
Query: 187 NYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFAL- 245
NYWIS GVRGRKP TP ALT+LNY SASK PLSPPP+TPRWDDY HSK+F+NK+ AL
Sbjct: 318 NYWISFGVRGRKPQTPQALTILNYKTNSASKFPLSPPPVTPRWDDYAHSKAFTNKVKALD 377
Query: 246 -MGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNG 304
PKPP+ +HRR+ LLNTQN +NG+TKW+INNVSL+LP TPYLGSI++GL++ FDQ
Sbjct: 378 HKTIPKPPSTYHRRIILLNTQNKMNGYTKWSINNVSLSLPATPYLGSIRFGLQNGFDQTK 437
Query: 305 PPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGH 364
PPE+F +YDVMKPP N NTT G+GVYML +TVDVILQNANA+ N+SEIHPWHLHGH
Sbjct: 438 PPESFPVQYDVMKPPGNPNTTTGNGVYMLSYYSTVDVILQNANALAENVSEIHPWHLHGH 497
Query: 365 DFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPH 424
DFWVLG GEGKFTK+DEKKFN+KNPP +N+AVIFPYGWTALRFVADNPG WAFHCHIEPH
Sbjct: 498 DFWVLGYGEGKFTKDDEKKFNMKNPPYRNSAVIFPYGWTALRFVADNPGVWAFHCHIEPH 557
Query: 425 FHIGMGVVLALGVETVGNIPNQALACGLTGKRFM 458
H+GMGVVLA GV+ + IP +AL+CGLTGK+FM
Sbjct: 558 LHMGMGVVLAEGVQRLPKIPKEALSCGLTGKKFM 591
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255578674|ref|XP_002530197.1| l-ascorbate oxidase, putative [Ricinus communis] gi|223530290|gb|EEF32187.1| l-ascorbate oxidase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/450 (74%), Positives = 385/450 (85%)
Query: 10 GTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSS 69
GTYFYHGH GMQRSAGLYGSLIVDVA+G+KEPF YDGEF+LLLSDWWH +VH QEVGLSS
Sbjct: 136 GTYFYHGHYGMQRSAGLYGSLIVDVAEGQKEPFKYDGEFDLLLSDWWHENVHHQEVGLSS 195
Query: 70 RPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLR 129
P+RWIGEPQT+L+NGRGQ+NCSLAA +S +QCKL+G E CAP I HV+P K YRLR
Sbjct: 196 SPMRWIGEPQTILMNGRGQYNCSLAAVYSRNPTQQCKLKGGENCAPFIFHVEPKKKYRLR 255
Query: 130 IASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYW 189
IASTTALASLNLA+ HKM+VVEADGNYV+PFE D +DIYSGESYSV++TTNQ P NYW
Sbjct: 256 IASTTALASLNLAIDGHKMLVVEADGNYVKPFETDSLDIYSGESYSVIITTNQHPYQNYW 315
Query: 190 ISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSP 249
ISAGV GR+P TP LTLL+Y+ TSASK+P SPPP+TPRW+D SK+F+NKI A G+
Sbjct: 316 ISAGVIGREPHTPQGLTLLHYNQTSASKLPESPPPVTPRWNDTARSKAFTNKILAKKGTQ 375
Query: 250 KPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENF 309
PP N+ RR+ LLNTQN NG TKWAINNVSL+LP TPYLG++K+GL++AFDQ PPE +
Sbjct: 376 PPPKNYDRRIILLNTQNKYNGHTKWAINNVSLSLPATPYLGAMKFGLRNAFDQEKPPEKY 435
Query: 310 SNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVL 369
YDVMKP N NTT+GSGVY +G TTVDVILQNANA+ ++SE+HPWHLHGHDFWVL
Sbjct: 436 DESYDVMKPAANPNTTVGSGVYTIGYQTTVDVILQNANALSKDVSEVHPWHLHGHDFWVL 495
Query: 370 GRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGM 429
G GEGKFT++DEKKFNLKNPPL+NTAVIFPYGWTALRFVADNPG WAFHCHIEPH H+GM
Sbjct: 496 GYGEGKFTEKDEKKFNLKNPPLRNTAVIFPYGWTALRFVADNPGVWAFHCHIEPHLHMGM 555
Query: 430 GVVLALGVETVGNIPNQALACGLTGKRFMN 459
GVV A G+E V +IP++ALACGLTG+RFM+
Sbjct: 556 GVVFAEGIEHVKDIPHEALACGLTGRRFMD 585
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|2493321|sp|Q40588.1|ASO_TOBAC RecName: Full=L-ascorbate oxidase; Short=ASO; Short=Ascorbase; Flags: Precursor gi|599594|dbj|BAA07734.1| ascorbate oxidase precursor [Nicotiana tabacum] | Back alignment and taxonomy information |
|---|
Score = 717 bits (1850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/456 (74%), Positives = 381/456 (83%), Gaps = 1/456 (0%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGL 67
+AGTYFYHGH GMQRSAGLYGSLIV+V +GEKEPFHYDGEFNLLLSDWWH+ HEQEV L
Sbjct: 124 KAGTYFYHGHYGMQRSAGLYGSLIVEVGEGEKEPFHYDGEFNLLLSDWWHKGSHEQEVDL 183
Query: 68 SSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYR 127
SS PLRWIGEPQTLL+NGRGQ+NCSLAA FS QCKLRG EQ APQIL V+PNK YR
Sbjct: 184 SSNPLRWIGEPQTLLLNGRGQYNCSLAARFSKPPLPQCKLRGGEQYAPQILRVRPNKIYR 243
Query: 128 LRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYN 187
LR+ASTTAL SL+LA+ HKMVVVEADGNYVQPF V DMDIYSGESYSVL T+QDP+ N
Sbjct: 244 LRVASTTALGSLSLAIGGHKMVVVEADGNYVQPFSVQDMDIYSGESYSVLFKTDQDPTKN 303
Query: 188 YWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMG 247
YWIS VRGR+P TP LTLLNY P SASK P PPPI P W+DY+HSKSFSNKIFALMG
Sbjct: 304 YWISINVRGREPKTPQGLTLLNYLPNSASKFPTLPPPIAPLWNDYNHSKSFSNKIFALMG 363
Query: 248 SPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPE 307
SPKPP HRR+ LLNTQN I+G+TKWAINNVSL LP YLGSI+YG+ +AFD PP+
Sbjct: 364 SPKPPPQNHRRIILLNTQNKIDGYTKWAINNVSLVLPTQLYLGSIRYGI-NAFDTKPPPD 422
Query: 308 NFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFW 367
NF +YDV+K N+N+T G+GVYML NTT+D+ILQNANA+ ++SEIHPWHLHGHDFW
Sbjct: 423 NFPKDYDVLKQAPNSNSTYGNGVYMLKFNTTIDIILQNANALAKDVSEIHPWHLHGHDFW 482
Query: 368 VLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHI 427
VLG GEGKF+++D KKFNLKNPPL+NTAVIFP+GWTALRFV DNPG WAFHCHIEPH H+
Sbjct: 483 VLGYGEGKFSEKDVKKFNLKNPPLRNTAVIFPFGWTALRFVTDNPGVWAFHCHIEPHLHM 542
Query: 428 GMGVVLALGVETVGNIPNQALACGLTGKRFMNPKQN 463
GMGV+ A GV V IP +ALACGLTGK M+ K N
Sbjct: 543 GMGVIFAEGVHLVKKIPKEALACGLTGKMLMSNKHN 578
|
Source: Nicotiana tabacum Species: Nicotiana tabacum Genus: Nicotiana Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356575058|ref|XP_003555659.1| PREDICTED: L-ascorbate oxidase [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 696 bits (1797), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/451 (71%), Positives = 375/451 (83%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGL 67
+ GTYFYHGH GMQR+AGLYGSLIVD+ G+ EPFHYDGEFNLL SD WH S HEQEVGL
Sbjct: 119 RPGTYFYHGHHGMQRAAGLYGSLIVDLPKGQNEPFHYDGEFNLLFSDLWHTSSHEQEVGL 178
Query: 68 SSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYR 127
S++PL+WIGEPQTLLINGRGQFNCSLA+ F N + +C+ +G E+CAPQILHV+PNKTYR
Sbjct: 179 STKPLKWIGEPQTLLINGRGQFNCSLASKFINTTLPECQFKGGEECAPQILHVEPNKTYR 238
Query: 128 LRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYN 187
+RIASTT+LA+LNLA+ NHK+VVVEADGNYV PF VDD+DIYSGESYSVLL T+QDP+ N
Sbjct: 239 IRIASTTSLAALNLAISNHKLVVVEADGNYVTPFAVDDVDIYSGESYSVLLRTDQDPNKN 298
Query: 188 YWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMG 247
YW+S GVRGRKP+T LT+LNY SAS P SPPPITP W+D++HSK+F+ KI A MG
Sbjct: 299 YWLSIGVRGRKPSTSQGLTILNYKTISASIFPTSPPPITPLWNDFEHSKAFTKKIIAKMG 358
Query: 248 SPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPE 307
+P+PP + RR+ LLNTQN ++GFTKW+INNVSLTLPPTPYLGSIK+ + +AFDQ PP
Sbjct: 359 TPQPPKLYDRRVFLLNTQNRVDGFTKWSINNVSLTLPPTPYLGSIKFKINNAFDQTPPPM 418
Query: 308 NFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFW 367
NF +YD+ PPVN N T+G+GVYM LN VDVILQN+N + N SEIHPWHLHGHDFW
Sbjct: 419 NFPQDYDIFNPPVNPNATIGNGVYMFNLNEVVDVILQNSNQLSVNGSEIHPWHLHGHDFW 478
Query: 368 VLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHI 427
VLG GEGKF DEKKFNL + PL+NTAVIFPYGWTALRF ADNPG WAFHCHIEPH H+
Sbjct: 479 VLGYGEGKFKLGDEKKFNLTHAPLRNTAVIFPYGWTALRFKADNPGVWAFHCHIEPHLHM 538
Query: 428 GMGVVLALGVETVGNIPNQALACGLTGKRFM 458
GMGV+ A GV VG IP +AL CGLTGK+ +
Sbjct: 539 GMGVIFAEGVHKVGKIPREALTCGLTGKKLV 569
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|543859|sp|P37064.1|ASO_CUCPM RecName: Full=L-ascorbate oxidase; Short=ASO; Short=Ascorbase gi|442635|pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9 Angstroms Resolution gi|442636|pdb|1AOZ|B Chain B, Refined Crystal Structure Of Ascorbate Oxidase At 1.9 Angstroms Resolution gi|493837|pdb|1ASO|A Chain A, X-Ray Structures And Mechanistic Implications Of Three Functional Derivatives Of Ascorbate Oxidase From Zucchini: Reduced-, Peroxide-, And Azide-Forms gi|493838|pdb|1ASO|B Chain B, X-Ray Structures And Mechanistic Implications Of Three Functional Derivatives Of Ascorbate Oxidase From Zucchini: Reduced-, Peroxide-, And Azide-Forms gi|493839|pdb|1ASP|A Chain A, X-ray Structures And Mechanistic Implications Of Three Functional Derivatives Of Ascorbate Oxidase From Zucchini: Reduced-, Peroxide-, And Azide-forms gi|493840|pdb|1ASP|B Chain B, X-ray Structures And Mechanistic Implications Of Three Functional Derivatives Of Ascorbate Oxidase From Zucchini: Reduced-, Peroxide-, And Azide-forms gi|493841|pdb|1ASQ|A Chain A, X-Ray Structures And Mechanistic Implications Of Three Functional Derivatives Of Ascorbate Oxidase From Zucchini: Reduced-, Peroxide-, And Azide-Forms gi|493842|pdb|1ASQ|B Chain B, X-Ray Structures And Mechanistic Implications Of Three Functional Derivatives Of Ascorbate Oxidase From Zucchini: Reduced-, Peroxide-, And Azide-Forms | Back alignment and taxonomy information |
|---|
Score = 686 bits (1771), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/454 (69%), Positives = 371/454 (81%), Gaps = 1/454 (0%)
Query: 10 GTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSS 69
GT+FYHGHLGMQRSAGLYGSLIVD G+KEPFHYDGE NLLLSDWWH+S+H+QEVGLSS
Sbjct: 99 GTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPFHYDGEINLLLSDWWHQSIHKQEVGLSS 158
Query: 70 RPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLR 129
+P+RWIGEPQT+L+NGRGQF+CS+AA + + + E CKL+G+E CAP I HV P KTYR+R
Sbjct: 159 KPIRWIGEPQTILLNGRGQFDCSIAAKY-DSNLEPCKLKGSESCAPYIFHVSPKKTYRIR 217
Query: 130 IASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYW 189
IASTTALA+LN A+ NH+++VVEADGNYVQPF D+DIYSGESYSVL+TT+Q+PS NYW
Sbjct: 218 IASTTALAALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYW 277
Query: 190 ISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSP 249
+S G R R P TPP LTLLNY P S SK+P SPPP TP WDD+D SK+F+ +I A MGSP
Sbjct: 278 VSVGTRARHPNTPPGLTLLNYLPNSVSKLPTSPPPQTPAWDDFDRSKNFTYRITAAMGSP 337
Query: 250 KPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENF 309
KPP F+RR+ LLNTQN ING+ KWAIN+VSL LPPTPYLG++KY L AFDQN PPE F
Sbjct: 338 KPPVKFNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVF 397
Query: 310 SNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVL 369
+YD+ PP N T +G+GVY + VDVILQNAN ++ NLSE HPWHLHGHDFWVL
Sbjct: 398 PEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVL 457
Query: 370 GRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGM 429
G G+GKF+ E+E NLKNPPL+NT VIFPYGWTA+RFVADNPG WAFHCHIEPH H+GM
Sbjct: 458 GYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGM 517
Query: 430 GVVLALGVETVGNIPNQALACGLTGKRFMNPKQN 463
GVV A GVE VG IP +ALACG T K +N +N
Sbjct: 518 GVVFAEGVEKVGRIPTKALACGGTAKSLINNPKN 551
|
Source: Cucurbita pepo var. melopepo Species: Cucurbita pepo Genus: Cucurbita Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|2827764|sp|P24792.2|ASO_CUCMA RecName: Full=L-ascorbate oxidase; Short=ASO; Short=Ascorbase; Flags: Precursor gi|885589|dbj|BAA09528.1| ascorbate oxidase [Cucurbita maxima] | Back alignment and taxonomy information |
|---|
Score = 684 bits (1765), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/450 (70%), Positives = 369/450 (82%), Gaps = 1/450 (0%)
Query: 10 GTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSS 69
GT+FYHGHLGMQRSAGLYGSLIVD G+KEPFHYDGE NLLLSDWWH+S+H+QEVGLSS
Sbjct: 129 GTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPFHYDGEINLLLSDWWHQSIHKQEVGLSS 188
Query: 70 RPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLR 129
+P+RWIGEPQT+L+NGRGQF+CS+AA + + + E CKL+G+E CAP I HV P KTYR+R
Sbjct: 189 KPIRWIGEPQTILLNGRGQFDCSIAAKY-DSNLEPCKLKGSEPCAPYIFHVMPKKTYRIR 247
Query: 130 IASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYW 189
IASTTALA+LN A+ NH ++VVEADGNYVQPF D+DIYSGESYSVL+TT+Q+PS NYW
Sbjct: 248 IASTTALAALNFAIGNHPLLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYW 307
Query: 190 ISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSP 249
+S G RGR P TPP LTLLNY P S SK+P SPPP TP WDD+D SK+F+ +I A MGSP
Sbjct: 308 VSVGTRGRHPNTPPGLTLLNYLPNSVSKLPTSPPPETPAWDDFDRSKNFTYRITAAMGSP 367
Query: 250 KPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENF 309
KPP +RR+ LLNTQN ING+ KWAIN+VSL LPPTPYLG++K+ L AFDQN PPE F
Sbjct: 368 KPPVKSNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKFNLLHAFDQNPPPEVF 427
Query: 310 SNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVL 369
+YD+ PP N T +G+GVY + VDVILQNAN ++ NLSEIHPWHLHGHDFWVL
Sbjct: 428 PEDYDIDTPPTNEKTKIGNGVYQFKIGEIVDVILQNANMMKENLSEIHPWHLHGHDFWVL 487
Query: 370 GRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGM 429
G G+GKFT E+E NLKNPPL+NT VIFPYGWTA+RFVADNPG WAFHCHIEPH H+GM
Sbjct: 488 GYGDGKFTAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGM 547
Query: 430 GVVLALGVETVGNIPNQALACGLTGKRFMN 459
GVV A GVE VG IP +ALACG T K +N
Sbjct: 548 GVVFAEGVEKVGRIPTKALACGGTAKSLIN 577
|
Source: Cucurbita maxima Species: Cucurbita maxima Genus: Cucurbita Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 463 | ||||||
| TAIR|locus:505006625 | 588 | AT5G21105 [Arabidopsis thalian | 0.980 | 0.772 | 0.631 | 6e-167 | |
| TAIR|locus:2178973 | 573 | AT5G21100 [Arabidopsis thalian | 0.967 | 0.781 | 0.603 | 5.8e-153 | |
| TAIR|locus:2135242 | 582 | AT4G39830 [Arabidopsis thalian | 0.958 | 0.762 | 0.476 | 2e-111 | |
| TAIR|locus:2143563 | 557 | LAC11 "laccase 11" [Arabidopsi | 0.879 | 0.730 | 0.285 | 1.7e-36 | |
| TAIR|locus:2153469 | 565 | LAC12 "laccase 12" [Arabidopsi | 0.874 | 0.716 | 0.288 | 6.6e-36 | |
| UNIPROTKB|G4N2Y0 | 603 | MGG_14307 "L-ascorbate oxidase | 0.444 | 0.341 | 0.347 | 8e-35 | |
| TAIR|locus:2042842 | 558 | IRX12 "IRREGULAR XYLEM 12" [Ar | 0.885 | 0.734 | 0.297 | 5.9e-34 | |
| TAIR|locus:2122689 | 589 | SKS1 "SKU5 similar 1" [Arabido | 0.881 | 0.692 | 0.254 | 2.6e-33 | |
| TAIR|locus:2193894 | 555 | sks12 "SKU5 similar 12" [Arabi | 0.693 | 0.578 | 0.263 | 4.9e-33 | |
| TAIR|locus:2150139 | 558 | LAC10 "laccase 10" [Arabidopsi | 0.887 | 0.736 | 0.290 | 2.4e-32 |
| TAIR|locus:505006625 AT5G21105 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1624 (576.7 bits), Expect = 6.0e-167, P = 6.0e-167
Identities = 288/456 (63%), Positives = 346/456 (75%)
Query: 10 GTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSS 69
GT+FYHGH GMQRSAGLYGSLIVDVA G+ E YDGEFNLLLSDWWH ++ QE+GLSS
Sbjct: 133 GTHFYHGHYGMQRSAGLYGSLIVDVAKGKSERLRYDGEFNLLLSDWWHEAIPSQELGLSS 192
Query: 70 RPLRWIGEPQTLLINGRGQFNCSLAAHFSNG-SAEQCKLRGNEQCAPQILHVQPNKTYRL 128
+P+RWIGE Q++LINGRGQFNCSLAA FSN S C + +QCAPQILHV+PNKTYR+
Sbjct: 193 KPMRWIGEAQSILINGRGQFNCSLAAQFSNNTSLPMCTFKEGDQCAPQILHVEPNKTYRI 252
Query: 129 RIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNY 188
R+ V+ HK+VVVEADGNY+ PF DD+DIYSGESYSVLLTT+QDPS NY
Sbjct: 253 RLSSTTALASLNLAVQGHKLVVVEADGNYITPFTTDDIDIYSGESYSVLLTTDQDPSQNY 312
Query: 189 WISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGS 248
+IS GVRGRKP T ALT+LNY ASK+P SPPP+TPRWDD++ SK+FS KIF+ MGS
Sbjct: 313 YISVGVRGRKPNTTQALTILNYVTAPASKLPSSPPPVTPRWDDFERSKNFSKKIFSAMGS 372
Query: 249 PKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPEN 308
P PP + +RL LLNTQN I+G+TKWAINNVSL P TPYLGS+KY LK F++ PP +
Sbjct: 373 PSPPKKYRKRLILLNTQNLIDGYTKWAINNVSLVTPATPYLGSVKYNLKLGFNRKSPPRS 432
Query: 309 FSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWV 368
+ +YD+M PP NTT G+G+Y+ N TVDVI+QNAN ++ +SEIHPWHLHGHDFWV
Sbjct: 433 YRMDYDIMNPPPFPNTTTGNGIYVFPFNVTVDVIIQNANVLKGIVSEIHPWHLHGHDFWV 492
Query: 369 LGRGEGKFTKE-DEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHI 427
LG G+GKF DE TA+++PYGWTA+RFV DNPG W FHCHIEPH H+
Sbjct: 493 LGYGDGKFKPGIDEKTYNLKNPPLRNTAILYPYGWTAIRFVTDNPGVWFFHCHIEPHLHM 552
Query: 428 GMGVVLALGVETVGNIPNQALACGLTGKRFMNPKQN 463
GMGVV A G+ +G +P++AL CGLT + MN +N
Sbjct: 553 GMGVVFAEGLNRIGKVPDEALGCGLTKQFLMNRNRN 588
|
|
| TAIR|locus:2178973 AT5G21100 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1492 (530.3 bits), Expect = 5.8e-153, P = 5.8e-153
Identities = 276/457 (60%), Positives = 329/457 (71%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGL 67
+AGT+FYHGH GMQRS+GLYG LIV KE YDGEFNLLLSDWWH+S+H QE+ L
Sbjct: 117 KAGTHFYHGHYGMQRSSGLYGMLIVR---SPKERLIYDGEFNLLLSDWWHQSIHAQELAL 173
Query: 68 SSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQ-CKLRGNEQCAPQILHVQPNKTY 126
SSRP+RWIGEPQ+LLINGRGQFNCS AA+F+ G + C + N+QCAPQ L V+PN+ Y
Sbjct: 174 SSRPMRWIGEPQSLLINGRGQFNCSQAAYFNKGGEKDVCTFKENDQCAPQTLRVEPNRVY 233
Query: 127 RLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSY 186
RLRI V+ H++VVVEADGNYV PF V+D+D+YSGE+YSVLL TN PS
Sbjct: 234 RLRIASTTALASLNLAVQGHQLVVVEADGNYVAPFTVNDIDVYSGETYSVLLKTNALPSK 293
Query: 187 NYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALM 246
YWIS GVRGR+P TP ALT++NY + S+ P PPP+TP W+D D SKSFS KIFA
Sbjct: 294 KYWISVGVRGREPKTPQALTVINYVDATESR-PSHPPPVTPIWNDTDRSKSFSKKIFAAK 352
Query: 247 GSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPP 306
G PKPP H +L LLNTQN +TKW+INNVSL++P TPYLGSI+YGLK A+D P
Sbjct: 353 GYPKPPEKSHDQLILLNTQNLYEDYTKWSINNVSLSVPVTPYLGSIRYGLKSAYDLKSPA 412
Query: 307 ENF-SNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHD 365
+ + YD+MKPP N NTT GSG+Y VDVILQNAN ++ +SEIHPWH+HGHD
Sbjct: 413 KKLIMDNYDIMKPPPNPNTTKGSGIYNFAFGIVVDVILQNANVLKGVISEIHPWHIHGHD 472
Query: 366 FWVLGRGEGKFTKE-DEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEPH 424
FWVLG GEGKF DE T V++P+GWTA+RFV DNPG W FHCHIEPH
Sbjct: 473 FWVLGYGEGKFKPGIDEKTFNLKNPPLRNTVVLYPFGWTAIRFVTDNPGVWFFHCHIEPH 532
Query: 425 FHIGMGVVLALGVETVGN--IPNQALACGLTGKRFMN 459
H+GMGVV GV+ +G IP++AL CGLT K MN
Sbjct: 533 LHMGMGVVFVEGVDRIGKMEIPDEALGCGLTRKWLMN 569
|
|
| TAIR|locus:2135242 AT4G39830 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1100 (392.3 bits), Expect = 2.0e-111, P = 2.0e-111
Identities = 217/455 (47%), Positives = 281/455 (61%)
Query: 10 GTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSS 69
GTY YH H GMQR +GL G + V E EPF YD + N LL+DW+H+S+ E+ GL+S
Sbjct: 131 GTYMYHSHYGMQRESGLIGMIQVSPPATEPEPFTYDYDRNFLLTDWYHKSMSEKATGLAS 190
Query: 70 RPLRWIGEPQTLLINGRGQFNCS--LAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYR 127
P +W+GEPQ+L+I GRG+FNCS L S S C + N C+ IL V P KTYR
Sbjct: 191 IPFKWVGEPQSLMIQGRGRFNCSNNLTTPPSLVSGV-CNV-SNADCSRFILTVIPGKTYR 248
Query: 128 LRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYN 187
LRI ++ H + VVEADG+YV+PF V ++ +YSGE+YSVLL +Q+P N
Sbjct: 249 LRIGSLTALSALSFQIEGHNLTVVEADGHYVEPFTVKNLFVYSGETYSVLLKADQNPRRN 308
Query: 188 YWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPP--ITPRWDDYDHSKSFSNKIFAL 245
YWI++ + R TPPA +LNY+P + P + I P W+D + S I A
Sbjct: 309 YWITSSIVSRPATTPPATAVLNYYPNHPRRRPPTSESSNIVPEWNDTRSRLAQSLAIKAR 368
Query: 246 MGSPKP-PTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQN- 303
G P N + + LLNTQN +NG+ +W++NNVS P TPYL ++K L +AFD
Sbjct: 369 RGFIHALPENSDKVIVLLNTQNEVNGYRRWSVNNVSYHHPKTPYLIALKQNLTNAFDWRF 428
Query: 304 GPPENF-SNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLH 362
PEN+ S YD+ P+NAN T G+Y L N+TVDVILQNAN + N SE HPWHLH
Sbjct: 429 TAPENYDSRNYDIFAKPLNANATTSDGIYRLRFNSTVDVILQNANTMNANNSETHPWHLH 488
Query: 363 GHDFWVLGRGEGKFTK-EDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHI 421
GHDFWVLG GEGKF + ED T + P+GWTALRF ADNPG W+FHCHI
Sbjct: 489 GHDFWVLGYGEGKFNESEDPKRYNRVDPIKKNTVAVQPFGWTALRFRADNPGVWSFHCHI 548
Query: 422 EPHFHIGMGVVLALGVETVGNIPNQALACGLTGKR 456
E HF +GMG+V G++ V ++P+ + CG T KR
Sbjct: 549 ESHFFMGMGIVFESGIDKVSSLPSSIMGCGQT-KR 582
|
|
| TAIR|locus:2143563 LAC11 "laccase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 130/455 (28%), Positives = 211/455 (46%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYD-GEFNLLLSDWWHRSVHEQEVG 66
Q GT ++H H+ R A +YG++++ A G+ PF E N++L +WW++ V E V
Sbjct: 119 QRGTLWWHAHILWLR-ATVYGAIVILPAPGKPYPFPQPYQESNIILGEWWNKDV-ETAVN 176
Query: 67 LSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTY 126
+++ +G P + AH NG L + ++ + KTY
Sbjct: 177 QANQ----LGAPPPMS-----------DAHTINGKPGP--LFPCSEKHTFVIEAEAGKTY 219
Query: 127 RLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSY 186
LRI + H M VVE D Y +PF + + G++ +VL+ T++ P+
Sbjct: 220 LLRIINAALNDELFFGIAGHNMTVVEIDAVYTKPFTTKAILLGPGQTTNVLVKTDRSPN- 278
Query: 187 NYWISAGVRGRKPATPPALT---LLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIF 243
Y+++A P + T +L Y + +P+ P P +D + ++ K+
Sbjct: 279 RYFMAASPFMDAPVSVDNKTVTAILQYKGVPNTVLPILPKLPLP--NDTSFALDYNGKLK 336
Query: 244 ALMGSPKP---PTNFHRRL--TL---LNTQNT-INGFTKWA-INNVSLTLPPTPYLGSIK 293
+L P P RRL T+ +N T +NG A INN++ +P T L +
Sbjct: 337 SLNTPNFPALVPLKVDRRLFYTIGLGINACPTCVNGTNLAASINNITFIMPKTALLKAHY 396
Query: 294 YGLKDAF--D-QNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIR 350
+ F D + PP+ F+ Y + N T+ G+ + + NTT++++LQ+ N +
Sbjct: 397 SNISGVFRTDFPDRPPKAFN--YTGVPLTANLGTSTGTRLSRVKFNTTIELVLQDTNLLT 454
Query: 351 PNLSEIHPWHLHGHDFWVLGRGEGKFT-KEDEXXXXXXXXXXXXTAVIFPYGWTALRFVA 409
E HP+HLHG++F+V+G G G F K+D T + GW A+RF A
Sbjct: 455 V---ESHPFHLHGYNFFVVGTGVGNFDPKKDPAKFNLVDPPERNTVGVPTGGWAAIRFRA 511
Query: 410 DNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIP 444
DNPG W HCH+E H G+ +A VE G P
Sbjct: 512 DNPGVWFMHCHLE--VHTMWGLKMAFVVEN-GETP 543
|
|
| TAIR|locus:2153469 LAC12 "laccase 12" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 388 (141.6 bits), Expect = 6.6e-36, P = 6.6e-36
Identities = 135/468 (28%), Positives = 208/468 (44%)
Query: 6 QVQAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHY-DGEFNLLLSDWWHRS---VH 61
Q Q GT ++H H R A +YG+LI+ G PF D + L+L +WW+ + V
Sbjct: 118 QGQEGTLWWHAHSSWLR-ATVYGALIIHPTPGSSFPFPKPDRQTALMLGEWWNANPVDVI 176
Query: 62 EQEVGLSSRPLRWIGEPQTLLINGR-GQ-FNCSLAAHFSNGSAEQCKLRGNEQCAPQILH 119
Q + P I + T ING+ G +NCS + E ++
Sbjct: 177 NQATRTGAAPN--ISDAYT--INGQPGDLYNCS--------TKETV-----------VVP 213
Query: 120 VQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLT 179
+ +T LR+ V NHK+ VV AD +Y++PF + + G++ VLLT
Sbjct: 214 INSGETSLLRVINAALNQPLFFTVANHKLTVVGADASYLKPFTTKVLMLGPGQTTDVLLT 273
Query: 180 TNQDPSYNYWISAGVRGRKPA---TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSK 236
+Q P Y + + + A +L Y T+ + P+ P + P ++D +
Sbjct: 274 ADQPPKRYYIAARAYQSAQNAPFDNTTTTAILQYKKTTTTSKPIMP--VLPAFNDTNTVT 331
Query: 237 SFSNKIFALMGSPKPPT-NFHRRLTL-LNTQNTINGFTKWAINNVSLTLPPTPYLGSIKY 294
SFS K +L P T + + T+ L N F K ++ T T + ++ +
Sbjct: 332 SFSRKFKSLRNVVVPKTIDDNLFFTIGLGLDNCPKKFPKSRCQGLNGTRF-TASMNNVSF 390
Query: 295 GLKDAFD-----QNGPPENFSNEYDVMKPPV-------NANTTL-----GSGVYMLGLNT 337
L F NG P F+ ++ KPPV N + L G+ +Y L +
Sbjct: 391 VLPSNFSLLQAHSNGIPGVFTTDFP-SKPPVKFDYTGNNISRALFQPVKGTKLYKLKYGS 449
Query: 338 TVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFT-KEDEXXXXXXXXXXXXTAV 396
V V+LQ+ N + SE HP HLHG+DF+++G G G F K+D T
Sbjct: 450 RVQVVLQDTNIVT---SENHPIHLHGYDFYIVGEGFGNFNPKKDTSKFNLVDPPLRNTVA 506
Query: 397 IFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVET-VGNI 443
+ GW +RFVADNPG W HCH++ HI G+ +A V+ VG +
Sbjct: 507 VPVNGWAVIRFVADNPGVWLMHCHLD--VHIKWGLAMAFLVDNGVGEL 552
|
|
| UNIPROTKB|G4N2Y0 MGG_14307 "L-ascorbate oxidase" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
Score = 304 (112.1 bits), Expect = 8.0e-35, Sum P(2) = 8.0e-35
Identities = 81/233 (34%), Positives = 119/233 (51%)
Query: 9 AGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLS 68
AGTYFYH H+ Q + +G+LIV+ D K P+ YD + + L +++ ++ + GL
Sbjct: 126 AGTYFYHSHVEFQ-AVTAHGALIVE--DAVKPPYEYDEDVVVGLGEYYPKTDRQILDGLL 182
Query: 69 SRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRL 128
++P RW GEP+ +L GR N S F+ S + CK P ++ VQP+KTYR+
Sbjct: 183 AKPFRWSGEPEAILFAGRSG-NKS----FTEASHDSCK--------PDLIKVQPDKTYRV 229
Query: 129 RIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTN--QD-PS 185
R + H M ++EADG+Y +P + D M + SG+ YS+LL T Q+ S
Sbjct: 230 RFIGGTAMSLVVMAFEGHDMTIIEADGSYTKPVKTDRMQVGSGQRYSILLRTKSVQEVAS 289
Query: 186 YN---YWISAGVRGRKPATPPALTLLNYH-PTSA-SKIPLSPP--PITPRWDD 231
N YWI RGR P LL Y P + +P + P P+ DD
Sbjct: 290 TNKTSYWIQYETRGR-PTNVTGWALLQYEMPGQPEAMLPATLPSKPVATIPDD 341
|
|
| TAIR|locus:2042842 IRX12 "IRREGULAR XYLEM 12" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 371 (135.7 bits), Expect = 5.9e-34, P = 5.9e-34
Identities = 137/460 (29%), Positives = 205/460 (44%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHY-DGEFNLLLSDWWHRSVHEQEVG 66
Q GT ++H H+ R A +YG+L++ G PF D E ++L +WW +S E +
Sbjct: 120 QRGTLWWHAHILWLR-ATVYGALVILPKRGVPYPFPKPDNEKVIVLGEWW-KSDTENIIN 177
Query: 67 LSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTY 126
+ + + +ING H G C +G + L V+ KTY
Sbjct: 178 EALKSGLAPNVSDSHMING----------H--PGPVRNCPSQGYK------LSVENGKTY 219
Query: 127 RLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSY 186
LR+ V H VVE D YV+PF+ D + I G++ +VLLT ++
Sbjct: 220 LLRLVNAALNEELFFKVAGHIFTVVEVDAVYVKPFKTDTVLIAPGQTTNVLLTASKSAG- 278
Query: 187 NYWISAGVRGRKPATPPALTL---LNYHPT-SASKIPLSPPPITPRWDDYDHSKSFSNKI 242
Y ++A P +T ++Y T S+S L+ PP P+ + + +F+N +
Sbjct: 279 KYLVTASPFMDAPIAVDNVTATATVHYSGTLSSSPTILTLPP--PQ-NATSIANNFTNSL 335
Query: 243 FALMGSPKP---PTNFHRRL--TL---LNTQNTI---NGFTKWA-INNVSLTLPPTPYLG 290
+L P PT L T+ LN T NG A INNV+ +P T L
Sbjct: 336 RSLNSKKYPALVPTTIDHHLFFTVGLGLNACPTCKAGNGSRVVASINNVTFIMPKTALLP 395
Query: 291 SIKYGLKDAFDQNGPPENFSNEYDVMKPPV-NANTTLGSGVYMLGLNTTVDVILQNANAI 349
+ + F + P +N + ++ V N T G+ +Y L N TV ++LQ+ I
Sbjct: 396 AHYFNTSGVFTTDFP-KNPPHVFNYSGGSVTNMATETGTRLYKLPYNATVQLVLQDTGVI 454
Query: 350 RPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYG-WTALRFV 408
P E HP HLHG +F+ +GRG G F + + P G W +RF
Sbjct: 455 AP---ENHPVHLHGFNFFEVGRGLGNFNSTKDPKNFNLVDPVERNTIGVPSGGWVVIRFR 511
Query: 409 ADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQAL 448
ADNPG W HCH+E H G+ +A VE G PNQ++
Sbjct: 512 ADNPGVWFMHCHLE--VHTTWGLKMAFLVEN-GKGPNQSI 548
|
|
| TAIR|locus:2122689 SKS1 "SKU5 similar 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 367 (134.2 bits), Expect = 2.6e-33, P = 2.6e-33
Identities = 119/467 (25%), Positives = 203/467 (43%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHY-DGEFNLLLSDWWHRSVHEQEVG 66
Q G++FY L QR++G +G ++++ D PF DGE ++ DW+ +
Sbjct: 121 QIGSFFYSPSLNFQRASGGFGPIVINNRDIIPIPFPQPDGELIFIIGDWYTQDHKALRRA 180
Query: 67 LSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTY 126
L S + +G P +LING+G + N S G + HV+P KTY
Sbjct: 181 LDSG--KELGMPDGVLINGKGPYKY-------NSSVPD----GIDYLT---FHVEPGKTY 224
Query: 127 RLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSY 186
R+R+ ++NH +++VE +G+Y D D++ G+SYS L+T +QD +
Sbjct: 225 RIRVHNVGISTSLNFRIQNHSLLLVETEGHYTSQANFTDFDVHVGQSYSFLVTMDQDATS 284
Query: 187 NYWISAGVRGRKPATPPALT---LLNYHPTSASKIPLSPPPITPR------WDDYDHSKS 237
+Y+I A R +T +L+Y S SK P+S P P+ W K+
Sbjct: 285 DYYIVASARFVNETVWQRVTGVAILHY---SNSKGPVSGPLPVPKTDVSSPWSAMSQPKT 341
Query: 238 FSNKIFALMGSPKPPTNFHR-RLTLLNTQ-------NTINGFTKWAINNVSLTLPPTPYL 289
A P P +FH ++ + NT ING + +N +S P TP
Sbjct: 342 IRQNTSASGARPNPQGSFHYGQINITNTYILRSLPPTIINGALRATLNGISFVNPSTPVR 401
Query: 290 GSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAI 349
+ + +K A+ + P F+ P+ + ++ + Y G + V+ QN
Sbjct: 402 LADRNKVKGAYKLDFPDRPFNR-------PLRLDRSMINATYK-GF---IQVVFQN---- 446
Query: 350 RPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVA 409
N ++I +H+ G+ F+V+G G ++++ + T ++P GWTA+
Sbjct: 447 --NDTKIQSFHVDGYSFFVVGMDFGIWSEDKKGSYNNWDAISRSTIEVYPGGWTAVLISL 504
Query: 410 DNPGAWAFHCHIEPHFHIGMGVVLAL-GVETVGNI----PNQALACG 451
DN G W +++G + + E G P+ L CG
Sbjct: 505 DNVGVWNIRVENLDRWYLGEETYMRITNPEEDGKTEMDPPDNVLYCG 551
|
|
| TAIR|locus:2193894 sks12 "SKU5 similar 12" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 307 (113.1 bits), Expect = 4.9e-33, Sum P(2) = 4.9e-33
Identities = 95/360 (26%), Positives = 164/360 (45%)
Query: 120 VQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLT 179
++P KTYR+RI ++NHKM +VE +G++V + D +D++ G+ + V++T
Sbjct: 212 LKPGKTYRVRICNVGLKASLNFRIQNHKMKLVEMEGSHVLQNDYDSLDVHVGQCFGVIVT 271
Query: 180 TNQDPSYNYWISAGVRG-RKPATPPALTLLNYH----PTSASKIPLSPPPITPRWDDYDH 234
+Q+P +Y++ A R +KP T L L Y P S S++P +P + W +
Sbjct: 272 ADQEPK-DYYMIASTRFLKKPLTTTGL--LRYEGGKGPAS-SQLPAAP--VGWAWS-LNQ 324
Query: 235 SKSFSNKIFALMGSPKPPTNFH-------RRLTLLNTQNTINGFTKWAINNVSLTLPPTP 287
+SF + A P P ++H R + L+NTQ ++G ++A++ VS T P TP
Sbjct: 325 YRSFRWNLTASAARPNPQGSYHYGKINITRTIKLVNTQGKVDGKLRYALSGVSHTDPETP 384
Query: 288 YLGSIKYGLKD-AFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNA 346
+ +G+ D F + +N N D +K N + V + T ++V+ +N
Sbjct: 385 LKLAEYFGVADKVFKYDTISDN-PNP-DQIK-----NIKIEPNVLNITHRTFIEVVFENH 437
Query: 347 NAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALR 406
+ WHL G+ F+ + G +T E T ++P W A+
Sbjct: 438 ER------SVQSWHLDGYSFFAVAVEPGTWTPEKRKNYNLLDAVSRHTVQVYPKCWAAIL 491
Query: 407 FVADNPGAWAFHCHIEPHFHIGMGVVLAL-----GVETVGNIPNQALACGLT-GKRFMNP 460
DN G W ++G + ++ + N+P +L CGL GK +NP
Sbjct: 492 LTFDNCGMWNIRSENAERRYLGQQLYASVLSPEKSLRDEYNMPETSLQCGLVKGKPKVNP 551
|
|
| TAIR|locus:2150139 LAC10 "laccase 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 357 (130.7 bits), Expect = 2.4e-32, P = 2.4e-32
Identities = 134/461 (29%), Positives = 210/461 (45%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDG-EFNLLLSDWWHRSVHEQEVG 66
Q GT ++H H+ R A ++G++++ G PF E ++L +WW +S E V
Sbjct: 118 QRGTLWWHAHVLWLR-ATVHGAIVILPKLGLPYPFPKPHREEVIILGEWW-KSDTETVVN 175
Query: 67 LSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTY 126
+ + +ING H G C +GN + A V+ KTY
Sbjct: 176 EALKSGLAPNVSDAHVING----------H--PGFVPNCPSQGNFKLA-----VESGKTY 218
Query: 127 RLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSY 186
LR+ + H+ VVE D YV+PF D + I G++ + L++ + PS
Sbjct: 219 MLRLINAALNEELFFKIAGHRFTVVEVDAVYVKPFNTDTILIAPGQTTTALVSAAR-PSG 277
Query: 187 NYWISAGVRGRKPATP----PALTLLNYHPT-SASKIPL-SPPP--ITPRWDDYDHS-KS 237
Y I+A A ++Y T SA+ SPPP T + + +S +S
Sbjct: 278 QYLIAAAPFQDSAVVAVDNRTATATVHYSGTLSATPTKTTSPPPQNATSVANTFVNSLRS 337
Query: 238 FSNKIFALMGSPKPPTNFHRRL-TL---LNTQNTING--FTKW--AINNVSLTLPPTPYL 289
++K + + P T H L T+ +N ++ F++ AINN++ +P T L
Sbjct: 338 LNSKTYP---ANVPITVDHDLLFTVGLGINRCHSCKAGNFSRVVAAINNITFKMPKTALL 394
Query: 290 GSIKYGLKDAFDQNGPPENFSNEYDVM-KPPVNANTTLGSGVYMLGLNTTVDVILQNANA 348
+ + L + + P + +D KPP N T + +Y L N+TV V+LQ+
Sbjct: 395 QAHYFNLTGIYTTDFPAKP-RRVFDFTGKPPSNLATMKATKLYKLPYNSTVQVVLQDTGN 453
Query: 349 IRPNLSEIHPWHLHGHDFWVLGRGEGKF-TKEDEXXXXXXXXXXXXTAVIFPYGWTALRF 407
+ P E HP HLHG +F+V+G G G + +K+D T + GW A+RF
Sbjct: 454 VAP---ENHPIHLHGFNFFVVGLGTGNYNSKKDSNKFNLVDPVERNTVGVPSGGWAAIRF 510
Query: 408 VADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQAL 448
ADNPG W HCH+E H G+ +A VE G PNQ++
Sbjct: 511 RADNPGVWFMHCHLE--VHTTWGLKMAFLVEN-GKGPNQSI 548
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| P14133 | ASO_CUCSA | 1, ., 1, 0, ., 3, ., 3 | 0.7209 | 0.9632 | 0.7597 | N/A | no |
| Q40588 | ASO_TOBAC | 1, ., 1, 0, ., 3, ., 3 | 0.7456 | 0.9827 | 0.7871 | N/A | no |
| P24792 | ASO_CUCMA | 1, ., 1, 0, ., 3, ., 3 | 0.7044 | 0.9697 | 0.7754 | N/A | no |
| P37064 | ASO_CUCPM | 1, ., 1, 0, ., 3, ., 3 | 0.6982 | 0.9784 | 0.8206 | N/A | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 463 | |||
| TIGR03388 | 541 | TIGR03388, ascorbase, L-ascorbate oxidase, plant t | 0.0 | |
| PLN02191 | 574 | PLN02191, PLN02191, L-ascorbate oxidase | 0.0 | |
| PLN02604 | 566 | PLN02604, PLN02604, oxidoreductase | 0.0 | |
| TIGR03389 | 539 | TIGR03389, laccase, laccase, plant | 2e-65 | |
| TIGR03390 | 538 | TIGR03390, ascorbOXfungal, L-ascorbate oxidase, fu | 1e-63 | |
| pfam00394 | 146 | pfam00394, Cu-oxidase, Multicopper oxidase | 2e-46 | |
| PLN02354 | 552 | PLN02354, PLN02354, copper ion binding / oxidoredu | 2e-45 | |
| PLN02168 | 545 | PLN02168, PLN02168, copper ion binding / pectinest | 9e-41 | |
| PLN02835 | 539 | PLN02835, PLN02835, oxidoreductase | 3e-40 | |
| PLN00044 | 596 | PLN00044, PLN00044, multi-copper oxidase-related p | 5e-38 | |
| PLN02991 | 543 | PLN02991, PLN02991, oxidoreductase | 6e-38 | |
| pfam07731 | 135 | pfam07731, Cu-oxidase_2, Multicopper oxidase | 7e-34 | |
| PLN02792 | 536 | PLN02792, PLN02792, oxidoreductase | 1e-33 | |
| COG2132 | 451 | COG2132, SufI, Putative multicopper oxidases [Seco | 2e-32 | |
| TIGR01480 | 587 | TIGR01480, copper_res_A, copper-resistance protein | 6e-16 | |
| TIGR01480 | 587 | TIGR01480, copper_res_A, copper-resistance protein | 2e-07 | |
| pfam07732 | 119 | pfam07732, Cu-oxidase_3, Multicopper oxidase | 1e-04 |
| >gnl|CDD|234193 TIGR03388, ascorbase, L-ascorbate oxidase, plant type | Back alignment and domain information |
|---|
Score = 843 bits (2179), Expect = 0.0
Identities = 339/447 (75%), Positives = 380/447 (85%), Gaps = 1/447 (0%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGL 67
+ GTYFYHGH GMQRSAGLYGSLIVDV DGEKEPFHYDGEFNLLLSDWWH+S+HEQEVGL
Sbjct: 95 RPGTYFYHGHYGMQRSAGLYGSLIVDVPDGEKEPFHYDGEFNLLLSDWWHKSIHEQEVGL 154
Query: 68 SSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYR 127
SS+P+RWIGEPQ+LLINGRGQFNCSLAA FS+ + QC L+GNEQCAPQILHV+P KTYR
Sbjct: 155 SSKPMRWIGEPQSLLINGRGQFNCSLAAKFSSTNLPQCNLKGNEQCAPQILHVEPGKTYR 214
Query: 128 LRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYN 187
LRIASTTALA+LN A++ HK+ VVEADGNYV+PF V D+DIYSGE+YSVLLTT+QDPS N
Sbjct: 215 LRIASTTALAALNFAIEGHKLTVVEADGNYVEPFTVKDIDIYSGETYSVLLTTDQDPSRN 274
Query: 188 YWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMG 247
YWIS GVRGRKP TPP LT+LNY+P S S++P +PPP+TP WDD+D SK+FS I A MG
Sbjct: 275 YWISVGVRGRKPNTPPGLTVLNYYPNSPSRLPPTPPPVTPAWDDFDRSKAFSLAIKAAMG 334
Query: 248 SPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPE 307
SPKPP RR+ LLNTQN ING+TKWAINNVSLTLP TPYLGS+KY L +AFDQ PPE
Sbjct: 335 SPKPPETSDRRIVLLNTQNKINGYTKWAINNVSLTLPHTPYLGSLKYNLLNAFDQKPPPE 394
Query: 308 NFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFW 367
N+ +YD+ KPP N NTT G+G+Y L NTTVDVILQNAN + N SE HPWHLHGHDFW
Sbjct: 395 NYPRDYDIFKPPPNPNTTTGNGIYRLKFNTTVDVILQNANTLNGNNSETHPWHLHGHDFW 454
Query: 368 VLGRGEGKFT-KEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFH 426
VLG GEGKF DEK +NLKNPPL+NT VIFPYGWTALRFVADNPG WAFHCHIEPH H
Sbjct: 455 VLGYGEGKFRPGVDEKSYNLKNPPLRNTVVIFPYGWTALRFVADNPGVWAFHCHIEPHLH 514
Query: 427 IGMGVVLALGVETVGNIPNQALACGLT 453
+GMGVV A GVE VG +P +AL CGLT
Sbjct: 515 MGMGVVFAEGVEKVGKLPKEALGCGLT 541
|
Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. Length = 541 |
| >gnl|CDD|177843 PLN02191, PLN02191, L-ascorbate oxidase | Back alignment and domain information |
|---|
Score = 714 bits (1845), Expect = 0.0
Identities = 310/458 (67%), Positives = 368/458 (80%), Gaps = 2/458 (0%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGL 67
+ GT+FYHGH GMQRSAGLYGSLIVDVA G KE YDGEFNLLLSDWWH S+ QE+GL
Sbjct: 117 KPGTHFYHGHYGMQRSAGLYGSLIVDVAKGPKERLRYDGEFNLLLSDWWHESIPSQELGL 176
Query: 68 SSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNG-SAEQCKLRGNEQCAPQILHVQPNKTY 126
SS+P+RWIGE Q++LINGRGQFNCSLAA FSNG C + +QCAPQ L V+PNKTY
Sbjct: 177 SSKPMRWIGEAQSILINGRGQFNCSLAAQFSNGTELPMCTFKEGDQCAPQTLRVEPNKTY 236
Query: 127 RLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSY 186
R+R+ASTTALASLNLAV+ HK+VVVEADGNY+ PF DD+DIYSGESYSVLLTT+QDPS
Sbjct: 237 RIRLASTTALASLNLAVQGHKLVVVEADGNYITPFTTDDIDIYSGESYSVLLTTDQDPSQ 296
Query: 187 NYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALM 246
NY+IS GVRGRKP T ALT+LNY ASK+P SPPP+TPRWDD++ SK+FS KIF+ M
Sbjct: 297 NYYISVGVRGRKPNTTQALTILNYVTAPASKLPSSPPPVTPRWDDFERSKNFSKKIFSAM 356
Query: 247 GSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPP 306
GSP PP + +RL LLNTQN I+G+TKWAINNVSL P TPYLGS+KY LK F++ PP
Sbjct: 357 GSPSPPKKYRKRLILLNTQNLIDGYTKWAINNVSLVTPATPYLGSVKYNLKLGFNRKSPP 416
Query: 307 ENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDF 366
++ +YD+M PP NTT G+G+Y+ N TVDVI+QNAN ++ +SEIHPWHLHGHDF
Sbjct: 417 RSYRMDYDIMNPPPFPNTTTGNGIYVFPFNVTVDVIIQNANVLKGVVSEIHPWHLHGHDF 476
Query: 367 WVLGRGEGKFTKE-DEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHF 425
WVLG G+GKF DEK +NLKNPPL+NTA+++PYGWTA+RFV DNPG W FHCHIEPH
Sbjct: 477 WVLGYGDGKFKPGIDEKTYNLKNPPLRNTAILYPYGWTAIRFVTDNPGVWFFHCHIEPHL 536
Query: 426 HIGMGVVLALGVETVGNIPNQALACGLTGKRFMNPKQN 463
H+GMGVV A G+ +G IP++AL CGLT + MN +N
Sbjct: 537 HMGMGVVFAEGLNRIGKIPDEALGCGLTKQFLMNRNRN 574
|
Length = 574 |
| >gnl|CDD|215324 PLN02604, PLN02604, oxidoreductase | Back alignment and domain information |
|---|
Score = 539 bits (1389), Expect = 0.0
Identities = 233/449 (51%), Positives = 302/449 (67%), Gaps = 5/449 (1%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGL 67
+ GTY YH H GMQR AGLYGS+ V + G+ EPF YD + +++L+DW+H+S +EQ +GL
Sbjct: 118 RPGTYLYHAHYGMQREAGLYGSIRVSLPRGKSEPFSYDYDRSIILTDWYHKSTYEQALGL 177
Query: 68 SSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYR 127
SS P W+GEPQ+LLI G+G++NCSL + A C N +C+P +L V P KTYR
Sbjct: 178 SSIPFDWVGEPQSLLIQGKGRYNCSLVSS-PYLKAGVCNAT-NPECSPYVLTVVPGKTYR 235
Query: 128 LRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYN 187
LRI+S TAL++L+ ++ H M VVEADG+YV+PF V ++ IYSGE+YSVL+ +QDPS N
Sbjct: 236 LRISSLTALSALSFQIEGHNMTVVEADGHYVEPFVVKNLFIYSGETYSVLVKADQDPSRN 295
Query: 188 YWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMG 247
YW++ V R TPP L + NY+P + P + PP P W+D + + S I A G
Sbjct: 296 YWVTTSVVSRNNTTPPGLAIFNYYPNHPRRSPPTVPPSGPLWNDVEPRLNQSLAIKARHG 355
Query: 248 S-PKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPP 306
PP R + LLNTQN +NG+ +W++NNVS LP TPYL ++K L AFDQ PP
Sbjct: 356 YIHPPPLTSDRVIVLLNTQNEVNGYRRWSVNNVSFNLPHTPYLIALKENLTGAFDQTPPP 415
Query: 307 ENF-SNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHD 365
E + YD+ P N+N T +Y L N+TVD+ILQNAN + N SE HPWHLHGHD
Sbjct: 416 EGYDFANYDIYAKPNNSNATSSDSIYRLQFNSTVDIILQNANTMNANNSETHPWHLHGHD 475
Query: 366 FWVLGRGEGKFTK-EDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPH 424
FWVLG GEGKF D KK+NL +P +KNT + PYGWTALRF ADNPG WAFHCHIE H
Sbjct: 476 FWVLGYGEGKFNMSSDPKKYNLVDPIMKNTVPVHPYGWTALRFRADNPGVWAFHCHIESH 535
Query: 425 FHIGMGVVLALGVETVGNIPNQALACGLT 453
F +GMGVV G+E VG +P+ + CG +
Sbjct: 536 FFMGMGVVFEEGIERVGKLPSSIMGCGES 564
|
Length = 566 |
| >gnl|CDD|234194 TIGR03389, laccase, laccase, plant | Back alignment and domain information |
|---|
Score = 219 bits (560), Expect = 2e-65
Identities = 153/471 (32%), Positives = 225/471 (47%), Gaps = 64/471 (13%)
Query: 6 QVQAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPF-HYDGEFNLLLSDWWHRSVHEQE 64
Q GT ++H H+ R A +YG++++ G PF D E ++L +WW+ V
Sbjct: 95 TGQRGTLWWHAHISWLR-ATVYGAIVILPKPGVPYPFPKPDREVPIILGEWWNADVEA-- 151
Query: 65 VGLSSRPLRWIGEPQ---TLLINGRGQ--FNCSLAAHFSNGSAEQCKLRGNEQCAPQILH 119
+ ++ + G P ING +NCS F L
Sbjct: 152 --VINQANQTGGAPNVSDAYTINGHPGPLYNCSSKDTFK-------------------LT 190
Query: 120 VQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLT 179
V+P KTY LRI + L A+ NH + VVE D Y +PF+ + I G++ +VLLT
Sbjct: 191 VEPGKTYLLRIINAALNDELFFAIANHTLTVVEVDATYTKPFKTKTIVIGPGQTTNVLLT 250
Query: 180 TNQDPSYNYWISAGVRGRKPAT---PPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSK 236
+Q P Y+++A P +L Y TS S P+ P P ++D +
Sbjct: 251 ADQSPG-RYFMAARPYMDAPGAFDNTTTTAILQYKGTSNSAKPILP--TLPAYNDTAAAT 307
Query: 237 SFSNKIFALMGSPKP---PTNFHRRLTL----------LNTQNTINGFTKWA--INNVSL 281
+FSNK+ +L + P P RRL NT NG T++A +NN+S
Sbjct: 308 NFSNKLRSLNSAQYPANVPVTIDRRLFFTIGLGLDPCPNNTCQGPNG-TRFAASMNNISF 366
Query: 282 TLPPTPYLGSIKYGLKDAFDQN---GPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTT 338
+P T L + +G+ F + PP F+ Y P N TT G+ V L N+T
Sbjct: 367 VMPTTALLQAHYFGISGVFTTDFPANPPTKFN--YTGTNLPNNLFTTNGTKVVRLKFNST 424
Query: 339 VDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKF-TKEDEKKFNLKNPPLKNTAVI 397
V+++LQ+ + + E HP HLHG++F+V+G G G F K+D KFNL +PP +NT +
Sbjct: 425 VELVLQDTSILGS---ENHPIHLHGYNFFVVGTGFGNFDPKKDPAKFNLVDPPERNTVGV 481
Query: 398 FPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQAL 448
GW A+RFVADNPG W HCH+E H G+ + + G PNQ+L
Sbjct: 482 PTGGWAAIRFVADNPGVWFMHCHLEVHTTWGLKMAF---LVDNGKGPNQSL 529
|
Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. Length = 539 |
| >gnl|CDD|132431 TIGR03390, ascorbOXfungal, L-ascorbate oxidase, fungal type | Back alignment and domain information |
|---|
Score = 214 bits (547), Expect = 1e-63
Identities = 134/464 (28%), Positives = 203/464 (43%), Gaps = 72/464 (15%)
Query: 9 AGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLS 68
AG+YFYH H+G Q + +G LIV+ D E P+ YD E LL+SD++ + E E GL
Sbjct: 105 AGSYFYHSHVGFQ-AVTAFGPLIVE--DCEPPPYKYDDERILLVSDFFSATDEEIEQGLL 161
Query: 69 SRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRL 128
S P W GE + +L+NG+ + ++ + C ++ V+P KTYRL
Sbjct: 162 STPFTWSGETEAVLLNGKSG-----------NKSFYAQINPSGSCMLPVIDVEPGKTYRL 210
Query: 129 RIASTTALASLNLAVKNHK-MVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTN------ 181
R TAL+ ++L +++H+ + ++EADG+Y +P ++D + + G+ YSVL
Sbjct: 211 RFIGATALSLISLGIEDHENLTIIEADGSYTKPAKIDHLQLGGGQRYSVLFKAKTEDELC 270
Query: 182 QDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPP-------ITPRWDDYDH 234
Y+I R R P +L Y ASK+P P T W +Y+
Sbjct: 271 GGDKRQYFIQFETRDR-PKVYRGYAVLRYRSDKASKLPSVPETPPLPLPNSTYDWLEYEL 329
Query: 235 SKSFSNKIFALMGSPKPPT--NFHRRLTLLNTQN--TINGFTKWAINNVSLT--LPPTPY 288
+ PT RR+ + QN +NG W N +S T + TPY
Sbjct: 330 EPLSEEN------NQDFPTLDEVTRRVVIDAHQNVDPLNGRVAWLQNGLSWTESVRQTPY 383
Query: 289 LGSI-KYGLKDAFDQNGPPEN--FSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQN 345
L I + GL + N F E P L +++ QN
Sbjct: 384 LVDIYENGLPATPNYTAALANYGFDPETRAF--PAKVGEVL-------------EIVWQN 428
Query: 346 --ANAIRPNLSEIHPWHLHGHDFWVLGRGEGKF-TKEDEKKFNLKNPPLKNTAVIFPY-- 400
+ + HP+H HG F+ +G G+G++ +E K P L++T +++ Y
Sbjct: 429 TGSYTGPNGGVDTHPFHAHGRHFYDIGGGDGEYNATANEAKLENYTPVLRDTTMLYRYAV 488
Query: 401 --------GWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALG 436
GW A R NPG W HCHI H +GM V G
Sbjct: 489 KVVPGAPAGWRAWRIRVTNPGVWMMHCHILQHMVMGMQTVWVFG 532
|
This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. Length = 538 |
| >gnl|CDD|215896 pfam00394, Cu-oxidase, Multicopper oxidase | Back alignment and domain information |
|---|
Score = 157 bits (399), Expect = 2e-46
Identities = 59/170 (34%), Positives = 78/170 (45%), Gaps = 28/170 (16%)
Query: 46 GEFNLLLSDWWHRSVHEQEVG---LSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSA 102
++ + LSDW+H+ + E P + P +LING+
Sbjct: 1 EDYVITLSDWYHKDAKDLEKELLASGKAPTDFPPVPDAVLINGKDG-------------- 46
Query: 103 EQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFE 162
+ L V P KTYRLRI + SLN +++ HKM VVE DG YV PF
Sbjct: 47 ----------ASLATLTVTPGKTYRLRIINVALDDSLNFSIEGHKMTVVEVDGVYVNPFT 96
Query: 163 VDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHP 212
VD +DI+ G+ YSVL+T NQDP NYWI A A +L Y
Sbjct: 97 VDSLDIFPGQRYSVLVTANQDPG-NYWIVASPNIPAFDNGTAAAILRYSG 145
|
Many of the proteins in this family contain multiple similar copies of this plastocyanin-like domain. Length = 146 |
| >gnl|CDD|177987 PLN02354, PLN02354, copper ion binding / oxidoreductase | Back alignment and domain information |
|---|
Score = 165 bits (420), Expect = 2e-45
Identities = 126/470 (26%), Positives = 210/470 (44%), Gaps = 66/470 (14%)
Query: 5 WQV--QAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPF-HYDGEFNLLLSDWWHRSVH 61
+Q Q G+YFY+ GM R+AG +G L V+ P+ + ++ +L+ DW+ +S
Sbjct: 115 FQPKDQIGSYFYYPSTGMHRAAGGFGGLRVNSRLLIPVPYADPEDDYTVLIGDWYTKSHT 174
Query: 62 EQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQ 121
+ L S R +G P +LING+ K G + + ++
Sbjct: 175 ALKKFLDSG--RTLGRPDGVLINGKSG-----------------KGDGKD---EPLFTMK 212
Query: 122 PNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTN 181
P KTYR RI + +SLN ++ HKM +VE +G++V + D +D++ G+ +SVL+T N
Sbjct: 213 PGKTYRYRICNVGLKSSLNFRIQGHKMKLVEMEGSHVLQNDYDSLDVHVGQCFSVLVTAN 272
Query: 182 QDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSP----PPITPRWDDYDHSKS 237
Q P +Y++ A R K ++ Y K P SP P+ W + +S
Sbjct: 273 QAPK-DYYMVASTRFLKKVL-TTTGIIRY---EGGKGPASPELPEAPVGWAW-SLNQFRS 326
Query: 238 FSNKIFALMGSPKPPTNFH-------RRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLG 290
F + A P P ++H R + L+N+ + ++G ++A+N VS P TP
Sbjct: 327 FRWNLTASAARPNPQGSYHYGKINITRTIKLVNSASKVDGKLRYALNGVSHVDPETPLKL 386
Query: 291 SIKYGLKDAFDQNGPPENFSNEYDVMK---PPVNANTTLGSGVYMLGLNTTVDVILQNAN 347
+ +G+ D F +YD +K P + V + T V++I +N
Sbjct: 387 AEYFGVADKV--------F--KYDTIKDNPPAKITKIKIQPNVLNITFRTFVEIIFEN-- 434
Query: 348 AIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRF 407
S + WHL G+ F+ + G +T E K +NL + ++T ++P W A+
Sbjct: 435 ---HEKS-MQSWHLDGYSFFAVAVEPGTWTPEKRKNYNLLDAVSRHTVQVYPKSWAAILL 490
Query: 408 VADNPGAWAFHCHIEPHFHIGMGV---VL--ALGVETVGNIPNQALACGL 452
DN G W ++G + VL + N+P AL CG
Sbjct: 491 TFDNAGMWNIRSENWERRYLGQQLYASVLSPERSLRDEYNMPENALLCGK 540
|
Length = 552 |
| >gnl|CDD|215113 PLN02168, PLN02168, copper ion binding / pectinesterase | Back alignment and domain information |
|---|
Score = 152 bits (386), Expect = 9e-41
Identities = 127/464 (27%), Positives = 195/464 (42%), Gaps = 82/464 (17%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPF-HYDGEFNLLLSDWW---HRSVHEQ 63
Q G+YFY L +Q++AG YG++ + + PF D E+++L+ DW+ H +
Sbjct: 119 QIGSYFYFPSLLLQKAAGGYGAIRIYNPELVPVPFPKPDEEYDILIGDWFYADHTVMRAS 178
Query: 64 EVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPN 123
S P P +L NGRG E +P
Sbjct: 179 LDNGHSLP-----NPDGILFNGRGP---------------------EET----FFAFEPG 208
Query: 124 KTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQD 183
KTYRLRI++ LN +++H M++VE +G YVQ +DI+ G+SYSVL+T D
Sbjct: 209 KTYRLRISNVGLKTCLNFRIQDHDMLLVETEGTYVQKRVYSSLDIHVGQSYSVLVTAKTD 268
Query: 184 PS---YNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHS----K 236
P +Y+I A R A + L+ Y P S P+ P P+ P DY S
Sbjct: 269 PVGIYRSYYIVATAR-FTDAYLGGVALIRY-PNS-PLDPVGPLPLAPALHDYFSSVEQAL 325
Query: 237 SFSNKIFALMGSPKPPTNFH-------RRLTLLNTQNTINGFTKWAINNVSLTLPPTPYL 289
S + P ++H R + L N +G ++ IN VS P TP
Sbjct: 326 SIRMDLNVGAARSNPQGSYHYGRINVTRTIILHNDVMLSSGKLRYTINGVSFVYPGTP-- 383
Query: 290 GSIKYGLKDAFDQNGPPENFSNEYDVMKP------PVNANTTLGSGVYMLGLNTTVDVIL 343
L D F N D + P P N TLG+ V + ++
Sbjct: 384 ----LKLVDHFQLN----------DTIIPGMFPVYPSNKTPTLGTSVVDIHYKDFYHIVF 429
Query: 344 QNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWT 403
QN L + +H+ G++F+V+G G G +++ + +NL + ++T ++PY WT
Sbjct: 430 QNP------LFSLESYHIDGYNFFVVGYGFGAWSESKKAGYNLVDAVSRSTVQVYPYSWT 483
Query: 404 ALRFVADNPGAWAFHCHIEPHFHIGMGV---VLALGVETVGNIP 444
A+ DN G W +++G + V G E IP
Sbjct: 484 AILIAMDNQGMWNVRSQKAEQWYLGQELYMRVKGEGEEDPSTIP 527
|
Length = 545 |
| >gnl|CDD|178429 PLN02835, PLN02835, oxidoreductase | Back alignment and domain information |
|---|
Score = 151 bits (382), Expect = 3e-40
Identities = 130/459 (28%), Positives = 202/459 (44%), Gaps = 63/459 (13%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHY-DGEFNLLLSDWWHRSVHEQEVG 66
Q GT+ Y ++AG +G++ V PF DG+F LL+ DW+ S +
Sbjct: 122 QIGTFTYFPSTLFHKAAGGFGAINVYERPRIPIPFPLPDGDFTLLVGDWYKTSHKTLQQR 181
Query: 67 LSS-RPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKT 125
L S + L + P +LING+ Q S S +Q KT
Sbjct: 182 LDSGKVLPF---PDGVLINGQTQ---------STFSGDQ------------------GKT 211
Query: 126 YRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPS 185
Y RI++ SLN ++ H M +VE +G++ D +D++ G+S +VL+T NQ P
Sbjct: 212 YMFRISNVGLSTSLNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVAVLVTLNQSPK 271
Query: 186 YNYWISAGVR-GRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFA 244
+Y+I A R R+ T A+ + T AS + P W ++++ + A
Sbjct: 272 -DYYIVASTRFTRQILTATAVLHYSNSRTPASGPLPALPSGELHW-SMRQARTYRWNLTA 329
Query: 245 LMGSPKPPTNFH-------RRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLK 297
P P +FH + + L N+ ING ++A+N VS TP LK
Sbjct: 330 SAARPNPQGSFHYGKITPTKTIVLANSAPLINGKQRYAVNGVSYVNSDTP--------LK 381
Query: 298 DAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIH 357
A D G P FS + P + + V L+ ++V+ QN N +
Sbjct: 382 LA-DYFGIPGVFSVN-SIQSLPSGGPAFVATSVMQTSLHDFLEVVFQN------NEKTMQ 433
Query: 358 PWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAF 417
WHL G+DFWV+G G G++T +NL + ++TA ++P WT + DN G W
Sbjct: 434 SWHLDGYDFWVVGYGSGQWTPAKRSLYNLVDALTRHTAQVYPKSWTTILVSLDNQGMWNM 493
Query: 418 HCHIEPHFHIGMGVVLAL--GVETVGN---IPNQALACG 451
I ++G L + V ++ N IP+ AL CG
Sbjct: 494 RSAIWERQYLGQQFYLRVWNQVHSLANEYDIPDNALLCG 532
|
Length = 539 |
| >gnl|CDD|165622 PLN00044, PLN00044, multi-copper oxidase-related protein; Provisional | Back alignment and domain information |
|---|
Score = 145 bits (367), Expect = 5e-38
Identities = 123/473 (26%), Positives = 208/473 (43%), Gaps = 68/473 (14%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHY--DGEFNLLLSDWWHRSVHEQEV 65
Q G++FY + R+AG YG++ ++ D PF + G+ L ++DW+ R
Sbjct: 122 QVGSFFYAPSTALHRAAGGYGAITINNRDVIPIPFGFPDGGDITLFIADWYARDHRALRR 181
Query: 66 GLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAP-----QILHV 120
L + L +G P +LIN G + + N+ P + ++V
Sbjct: 182 ALDAGDL--LGAPDGVLINAFGPY------------------QYNDSLVPPGITYERINV 221
Query: 121 QPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTT 180
P KTYR R+ + SLN ++ H +++VEA+G+Y ++DI+ G+SYS LLT
Sbjct: 222 DPGKTYRFRVHNVGVATSLNFRIQGHNLLLVEAEGSYTSQQNYTNLDIHVGQSYSFLLTM 281
Query: 181 NQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYD------H 234
+Q+ S +Y++ A R A LT + S S+ P S P D YD
Sbjct: 282 DQNASTDYYVVASARFVDAAVVDKLTGVAILHYSNSQGPASGPLPDAPDDQYDTAFSINQ 341
Query: 235 SKSFSNKIFALMGSPKPPTNFH------RRLTLLNTQ--NTINGFTKWAINNVSLTLPPT 286
++S + A P P +FH + LL + I+G + +N +S P T
Sbjct: 342 ARSIRWNVTASGARPNPQGSFHYGDITVTDVYLLQSMAPELIDGKLRATLNEISYIAPST 401
Query: 287 PYLGSIKYGLKDAFDQNGP--PENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQ 344
P + + + + F + P P N + D T++ +G Y +++I Q
Sbjct: 402 PLMLAQIFNVPGVFKLDFPNHPMNRLPKLD---------TSIINGTY----KGFMEIIFQ 448
Query: 345 NANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTA 404
N N + + +HL G+ F+V+G G +T +N + ++T +FP WTA
Sbjct: 449 N------NATNVQSYHLDGYAFFVVGMDYGLWTDNSRGTYNKWDGVARSTIQVFPGAWTA 502
Query: 405 LRFVADNPGAWAFHCHIEPHFHIGMGVVLAL------GVETVGNIPNQALACG 451
+ DN G W +++G V + + +TV IP+ A+ CG
Sbjct: 503 ILVFLDNAGIWNLRVENLDAWYLGQEVYINVVNPEDNSNKTVLPIPDNAIFCG 555
|
Length = 596 |
| >gnl|CDD|215536 PLN02991, PLN02991, oxidoreductase | Back alignment and domain information |
|---|
Score = 144 bits (365), Expect = 6e-38
Identities = 122/476 (25%), Positives = 197/476 (41%), Gaps = 74/476 (15%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYD-GEFNLLLSDWW---HRSVHEQ 63
Q G+++Y LG ++AG +G++ + PF ++ +L+ DW+ H+ + Q
Sbjct: 121 QIGSFYYFPSLGFHKAAGGFGAIRISSRPLIPVPFPAPADDYTVLIGDWYKTNHKDLRAQ 180
Query: 64 EVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPN 123
PL P +LINGRG + L+++P
Sbjct: 181 LDNGGKLPL-----PDGILINGRG--------------------------SGATLNIEPG 209
Query: 124 KTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQD 183
KTYRLRI++ SLN ++NH M +VE +G + +D++ G+SYSVL+T +Q
Sbjct: 210 KTYRLRISNVGLQNSLNFRIQNHTMKLVEVEGTHTIQTPFSSLDVHVGQSYSVLITADQ- 268
Query: 184 PSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPP----PITPRWDDYDHSKSFS 239
P+ +Y+I R T L S S P+S P PI W +D +++
Sbjct: 269 PAKDYYIVVSSR----FTSKILITTGVLHYSNSAGPVSGPIPDGPIQLSW-SFDQARAIK 323
Query: 240 NKIFALMGSPKPPTNFH-------RRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSI 292
+ A P P ++H R + L N+ I G ++A+N+ S TP
Sbjct: 324 TNLTASGPRPNPQGSYHYGKINITRTIRLANSAGNIEGKQRYAVNSASFYPADTP----- 378
Query: 293 KYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPN 352
L D F G N + P N + V V+++ +N I
Sbjct: 379 -LKLADYFKIAG----VYNPGSIPDQPTNGAIFPVTSVMQTDYKAFVEIVFENWEDI--- 430
Query: 353 LSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNP 412
+ WHL G+ F+V+G GK++ K +NL + + T ++P WTA+ DN
Sbjct: 431 ---VQTWHLDGYSFYVVGMELGKWSAASRKVYNLNDAVSRCTVQVYPRSWTAIYVSLDNV 487
Query: 413 GAWAFHCHIEPHFHIGMGVVLALGVETVG-----NIPNQALACG-LTGKRFMNPKQ 462
G W + ++G + + + IP AL CG TG P
Sbjct: 488 GMWNLRSELWERQYLGQQFYMRVYTTSTSLRDEYLIPKNALLCGRATGHHTTTPGP 543
|
Length = 543 |
| >gnl|CDD|219541 pfam07731, Cu-oxidase_2, Multicopper oxidase | Back alignment and domain information |
|---|
Score = 123 bits (311), Expect = 7e-34
Identities = 49/128 (38%), Positives = 63/128 (49%), Gaps = 9/128 (7%)
Query: 308 NFSNEYDVMKPPVNANTTLGSG-VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDF 366
+ D + LG+ V L V+++LQN N HP+HLHGH F
Sbjct: 11 QITGGNDRANWSPDNGPPLGTTEVITLPNGDRVEIVLQN------NTMGPHPFHLHGHSF 64
Query: 367 WVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFH 426
VLGRG G +T +NL +P ++T + P GW A+RF ADNPG W FHCHI H
Sbjct: 65 QVLGRGGGPWT--PTATYNLVDPVRRDTVQVPPGGWVAIRFKADNPGPWLFHCHILWHLD 122
Query: 427 IGMGVVLA 434
GM
Sbjct: 123 QGMMGQFV 130
|
This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. Length = 135 |
| >gnl|CDD|178389 PLN02792, PLN02792, oxidoreductase | Back alignment and domain information |
|---|
Score = 132 bits (333), Expect = 1e-33
Identities = 118/466 (25%), Positives = 196/466 (42%), Gaps = 58/466 (12%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPF-HYDGEFNLLLSDWWHRSVHEQEVG 66
Q G+YFY L +Q++AG YGSL + PF G+F L+ DW+ R+ H
Sbjct: 109 QVGSYFYFPSLAVQKAAGGYGSLRIYSLPRIPVPFPEPAGDFTFLIGDWYRRN-HTTLKK 167
Query: 67 LSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTY 126
+ + P ++ING+G ++ +S + V KTY
Sbjct: 168 ILDGGRKLPLMPDGVMINGQG-----VSYVYS-------------------ITVDKGKTY 203
Query: 127 RLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSY 186
R RI++ SLN + H++ ++E +G + +DI+ G++YSVL+T +Q P
Sbjct: 204 RFRISNVGLQTSLNFEILGHQLKLIEVEGTHTVQSMYTSLDIHVGQTYSVLVTMDQ-PPQ 262
Query: 187 NYWISAGVRGRKPATPPALTLLNYHPTSASKIPLS--PPPITPRWDDYDHSKSFSNKIFA 244
NY I R + TL +Y + KI + P P W ++S + A
Sbjct: 263 NYSIVVSTRFIAAKVLVSSTL-HYSNSKGHKIIHARQPDPDDLEWS-IKQAQSIRTNLTA 320
Query: 245 LMGSPKPPTNFH-------RRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLK 297
P ++H R L L ++ + ++AIN VS TP + + +K
Sbjct: 321 SGPRTNPQGSYHYGKMKISRTLILESSAALVKRKQRYAINGVSFVPSDTPLKLADHFKIK 380
Query: 298 DAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIH 357
F P+ KP L + V N +++I QN I +
Sbjct: 381 GVFKVGSIPD---------KPRRGGGMRLDTSVMGAHHNAFLEIIFQNREKI------VQ 425
Query: 358 PWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAF 417
+HL G++FWV+G +G +++ +++NLK+ ++T ++P WTA+ DN G W
Sbjct: 426 SYHLDGYNFWVVGINKGIWSRASRREYNLKDAISRSTTQVYPESWTAVYVALDNVGMWNL 485
Query: 418 HCHIEPHFHIGMGVVLALGVETVG-----NIPNQALACGLTGKRFM 458
++G L + T +P AL CG + M
Sbjct: 486 RSQFWARQYLGQQFYLRVYSPTHSLKDEYPLPKNALLCGRASNKNM 531
|
Length = 536 |
| >gnl|CDD|225043 COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 127 bits (321), Expect = 2e-32
Identities = 95/431 (22%), Positives = 133/431 (30%), Gaps = 103/431 (23%)
Query: 6 QVQAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEV 65
Q GTY+YH H Q GL G+LI++ D EP D E +L DW +
Sbjct: 122 QDVPGTYWYHPHTHGQVYDGLAGALIIE--DENSEPLGVDDEPVILQDDW---LDEDGTD 176
Query: 66 GLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKT 125
P TLL+NG V
Sbjct: 177 LYQEGPAMGGFPGDTLLVNGA---------------------------ILPFKAVPGG-V 208
Query: 126 YRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPS 185
RLR+ + + +LA+ + V+ DG + P VD++ + GE Y VL+ N +
Sbjct: 209 VRLRLLNAGNARTYHLALGGGPLTVIAVDGGPLPPVSVDELYLAPGERYEVLVDMNDGGA 268
Query: 186 YNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFAL 245
+ S L+ P D DH+ +
Sbjct: 269 VTLTALGEDMPDTLKG----FRAPNPILTPSYPVLNGRVGAPTGDMADHAPVGLLVTILV 324
Query: 246 MGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGP 305
P T+FH I G+ WAIN +
Sbjct: 325 EPGPNRDTDFH-------LIGGIGGYV-WAINGKA------------------------- 351
Query: 306 PENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHD 365
+D + + A T +L N + HP+HLHGH
Sbjct: 352 -------FDDNRVTLIAK-----------AGTRERWVLTN------DTPMPHPFHLHGHF 387
Query: 366 FWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHF 425
F VL P K+T ++ P +RF AD PG W FHCHI H
Sbjct: 388 FQVLSGD---------APAPGAAPGWKDTVLVAPGERLLVRFDADYPGPWMFHCHILEHE 438
Query: 426 HIGMGVVLALG 436
GM +
Sbjct: 439 DNGMMGQFGVV 449
|
Length = 451 |
| >gnl|CDD|233432 TIGR01480, copper_res_A, copper-resistance protein, CopA family | Back alignment and domain information |
|---|
Score = 79.9 bits (197), Expect = 6e-16
Identities = 60/198 (30%), Positives = 91/198 (45%), Gaps = 22/198 (11%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWW----------- 56
Q+GTY+YH H G Q AGLYG LI+D A E +P D E +LLSDW
Sbjct: 136 QSGTYWYHSHSGFQEQAGLYGPLIIDPA--EPDPVRADREHVVLLSDWTDLDPAALFRKL 193
Query: 57 -----HRSVHEQEVGLSSRPLRWIGEPQTL---LINGRGQFNCSLAAHFSNGSAEQCKLR 108
H + +++ V R +R G QTL + G+ + + A NGS +
Sbjct: 194 KVMAGHDNYYKRTVADFFRDVRNDGLKQTLADRKMWGQMRMTPTDLADV-NGSTYTYLMN 252
Query: 109 GNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDI 168
G +P + RLR + +A+ ++ + K+ VV DG YV P VD+ I
Sbjct: 253 GTTPAGNWTGLFRPGEKVRLRFINGSAMTYFDVRIPGLKLTVVAVDGQYVHPVSVDEFRI 312
Query: 169 YSGESYSVLLTTNQDPSY 186
E++ V++ D ++
Sbjct: 313 APAETFDVIVEPTGDDAF 330
|
This model represents the CopA copper resistance protein family. CopA is related to laccase (benzenediol:oxygen oxidoreductase) and L-ascorbate oxidase, both copper-containing enzymes. Most members have a typical TAT (twin-arginine translocation) signal sequence with an Arg-Arg pair. Twin-arginine translocation is observed for a large number of periplasmic proteins that cross the inner membrane with metal-containing cofactors already bound. The combination of copper-binding sites and TAT translocation motif suggests a mechansism of resistance by packaging and export [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 587 |
| >gnl|CDD|233432 TIGR01480, copper_res_A, copper-resistance protein, CopA family | Back alignment and domain information |
|---|
Score = 52.6 bits (126), Expect = 2e-07
Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 13/73 (17%)
Query: 357 HPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWA 416
HP HLHG + L G+G+F K+T + P G + R AD G WA
Sbjct: 521 HPIHLHGM-WSELEDGQGEFQ------------VRKHTVDVPPGGKRSFRVTADALGRWA 567
Query: 417 FHCHIEPHFHIGM 429
+HCH+ H GM
Sbjct: 568 YHCHMLLHMEAGM 580
|
This model represents the CopA copper resistance protein family. CopA is related to laccase (benzenediol:oxygen oxidoreductase) and L-ascorbate oxidase, both copper-containing enzymes. Most members have a typical TAT (twin-arginine translocation) signal sequence with an Arg-Arg pair. Twin-arginine translocation is observed for a large number of periplasmic proteins that cross the inner membrane with metal-containing cofactors already bound. The combination of copper-binding sites and TAT translocation motif suggests a mechansism of resistance by packaging and export [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 587 |
| >gnl|CDD|219542 pfam07732, Cu-oxidase_3, Multicopper oxidase | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 1e-04
Identities = 14/27 (51%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Query: 8 QAGTYFYHGHLGMQRS-AGLYGSLIVD 33
QAGTY+YH H + AGLYG++I++
Sbjct: 89 QAGTYWYHSHTSWLQQAAGLYGAIIIE 115
|
This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. Length = 119 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 463 | |||
| TIGR03388 | 541 | ascorbase L-ascorbate oxidase, plant type. Members | 100.0 | |
| PLN02191 | 574 | L-ascorbate oxidase | 100.0 | |
| PLN02604 | 566 | oxidoreductase | 100.0 | |
| PLN00044 | 596 | multi-copper oxidase-related protein; Provisional | 100.0 | |
| PLN02991 | 543 | oxidoreductase | 100.0 | |
| PLN02835 | 539 | oxidoreductase | 100.0 | |
| PLN02792 | 536 | oxidoreductase | 100.0 | |
| PLN02354 | 552 | copper ion binding / oxidoreductase | 100.0 | |
| TIGR03389 | 539 | laccase laccase, plant. Members of this protein fa | 100.0 | |
| PLN02168 | 545 | copper ion binding / pectinesterase | 100.0 | |
| TIGR03390 | 538 | ascorbOXfungal L-ascorbate oxidase, fungal type. T | 100.0 | |
| KOG1263 | 563 | consensus Multicopper oxidases [Secondary metaboli | 100.0 | |
| TIGR01480 | 587 | copper_res_A copper-resistance protein, CopA famil | 100.0 | |
| PRK10965 | 523 | multicopper oxidase; Provisional | 100.0 | |
| PRK10883 | 471 | FtsI repressor; Provisional | 100.0 | |
| COG2132 | 451 | SufI Putative multicopper oxidases [Secondary meta | 100.0 | |
| PF00394 | 159 | Cu-oxidase: Multicopper oxidase; InterPro: IPR0011 | 99.98 | |
| TIGR02376 | 311 | Cu_nitrite_red nitrite reductase, copper-containin | 99.98 | |
| PF07731 | 138 | Cu-oxidase_2: Multicopper oxidase; InterPro: IPR01 | 99.97 | |
| TIGR02376 | 311 | Cu_nitrite_red nitrite reductase, copper-containin | 99.63 | |
| PLN02604 | 566 | oxidoreductase | 99.05 | |
| TIGR03389 | 539 | laccase laccase, plant. Members of this protein fa | 98.99 | |
| PLN02835 | 539 | oxidoreductase | 98.91 | |
| PF07732 | 117 | Cu-oxidase_3: Multicopper oxidase; InterPro: IPR01 | 98.84 | |
| TIGR01480 | 587 | copper_res_A copper-resistance protein, CopA famil | 98.82 | |
| PLN02792 | 536 | oxidoreductase | 98.81 | |
| TIGR03390 | 538 | ascorbOXfungal L-ascorbate oxidase, fungal type. T | 98.78 | |
| PLN02354 | 552 | copper ion binding / oxidoreductase | 98.77 | |
| PLN02168 | 545 | copper ion binding / pectinesterase | 98.77 | |
| TIGR03388 | 541 | ascorbase L-ascorbate oxidase, plant type. Members | 98.76 | |
| PLN02991 | 543 | oxidoreductase | 98.74 | |
| PLN02191 | 574 | L-ascorbate oxidase | 98.63 | |
| PRK10883 | 471 | FtsI repressor; Provisional | 98.56 | |
| PLN00044 | 596 | multi-copper oxidase-related protein; Provisional | 98.47 | |
| PRK10965 | 523 | multicopper oxidase; Provisional | 98.38 | |
| PF00394 | 159 | Cu-oxidase: Multicopper oxidase; InterPro: IPR0011 | 98.34 | |
| TIGR03095 | 148 | rusti_cyanin rusticyanin. Rusticyanin is a blue co | 98.12 | |
| PF07731 | 138 | Cu-oxidase_2: Multicopper oxidase; InterPro: IPR01 | 97.99 | |
| KOG1263 | 563 | consensus Multicopper oxidases [Secondary metaboli | 97.89 | |
| TIGR02656 | 99 | cyanin_plasto plastocyanin. Members of this family | 97.76 | |
| TIGR03096 | 135 | nitroso_cyanin nitrosocyanin. Nitrosocyanin, as de | 97.52 | |
| COG2132 | 451 | SufI Putative multicopper oxidases [Secondary meta | 97.41 | |
| PF13473 | 104 | Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D | 97.04 | |
| PF00127 | 99 | Copper-bind: Copper binding proteins, plastocyanin | 96.47 | |
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 96.39 | |
| PRK02710 | 119 | plastocyanin; Provisional | 96.28 | |
| PF07732 | 117 | Cu-oxidase_3: Multicopper oxidase; InterPro: IPR01 | 95.92 | |
| COG4454 | 158 | Uncharacterized copper-binding protein [Inorganic | 95.79 | |
| TIGR03096 | 135 | nitroso_cyanin nitrosocyanin. Nitrosocyanin, as de | 95.71 | |
| TIGR03095 | 148 | rusti_cyanin rusticyanin. Rusticyanin is a blue co | 95.62 | |
| PF13473 | 104 | Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D | 94.95 | |
| TIGR02375 | 116 | pseudoazurin pseudoazurin. Pseudoazurin, also call | 93.88 | |
| TIGR03102 | 115 | halo_cynanin halocyanin domain. Halocyanins are bl | 93.09 | |
| TIGR02657 | 83 | amicyanin amicyanin. Members of this family are am | 92.81 | |
| PF00116 | 120 | COX2: Cytochrome C oxidase subunit II, periplasmic | 92.73 | |
| PF12690 | 82 | BsuPI: Intracellular proteinase inhibitor; InterPr | 91.5 | |
| PF06525 | 196 | SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Memb | 89.95 | |
| PF06525 | 196 | SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Memb | 89.51 | |
| TIGR02656 | 99 | cyanin_plasto plastocyanin. Members of this family | 88.28 | |
| TIGR03094 | 195 | sulfo_cyanin sulfocyanin. Members of this family a | 87.83 | |
| COG3794 | 128 | PetE Plastocyanin [Energy production and conversio | 87.36 | |
| TIGR02866 | 201 | CoxB cytochrome c oxidase, subunit II. Cytochrome | 87.28 | |
| COG4454 | 158 | Uncharacterized copper-binding protein [Inorganic | 87.02 | |
| TIGR02375 | 116 | pseudoazurin pseudoazurin. Pseudoazurin, also call | 82.67 | |
| PF07705 | 101 | CARDB: CARDB; InterPro: IPR011635 The APHP (acidic | 81.91 |
| >TIGR03388 ascorbase L-ascorbate oxidase, plant type | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-89 Score=712.21 Aligned_cols=450 Identities=75% Similarity=1.305 Sum_probs=344.5
Q ss_pred cccccccceeEEEeccchhhhhcceeeEEEEeCCCCCCCCCCCCcceEEEEeeeecccHHHHHhhhcCCCCCCCCCCCeE
Q 012467 2 LDVWQVQAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTL 81 (463)
Q Consensus 2 ~~~~~~~~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~d~~ 81 (463)
|+|.+.|+||||||||.+.|+++||+|+|||+++.++..|+.||+|++|+|+||+++...+........+..+..++|++
T Consensus 89 y~f~~~~~Gt~wyH~H~~~q~~~Gl~G~liV~~~~~~~~p~~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~~d~~ 168 (541)
T TIGR03388 89 YNFVVDRPGTYFYHGHYGMQRSAGLYGSLIVDVPDGEKEPFHYDGEFNLLLSDWWHKSIHEQEVGLSSKPMRWIGEPQSL 168 (541)
T ss_pred EEEEcCCCEEEEEEecchHHhhccceEEEEEecCCCCCCCccccceEEEEeecccCCCHHHHHhhcccCCCcCCCCCcce
Confidence 78899999999999999999999999999999987656688899999999999999987665555444333334578999
Q ss_pred EECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCccccee
Q 012467 82 LINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPF 161 (463)
Q Consensus 82 liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~ 161 (463)
||||+++++|+............|....+..+.+.+++|++||+|||||||+|+.+.+.|+||+|+|+|||+||++++|+
T Consensus 169 liNG~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~id~h~~~VIa~DG~~v~P~ 248 (541)
T TIGR03388 169 LINGRGQFNCSLAAKFSSTNLPQCNLKGNEQCAPQILHVEPGKTYRLRIASTTALAALNFAIEGHKLTVVEADGNYVEPF 248 (541)
T ss_pred EECCCCCCCCccccccCccccchhhccCCCCCCceEEEECCCCEEEEEEEcccccceEEEEECCCEEEEEEeCCEecccc
Confidence 99999999887532111112234543344455667799999999999999999999999999999999999999999999
Q ss_pred eEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCCCCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCccccccccc
Q 012467 162 EVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNK 241 (463)
Q Consensus 162 ~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~ 241 (463)
.++.|.|++||||||+|++++.++++||||+.....+.+....+|||+|+++.....++.+.|..|.+.+..........
T Consensus 249 ~v~~l~i~~GqR~dvlv~~~~~~~~~y~ira~~~~~~~~~~~~~aiL~Y~~~~~~~~p~~~~~~~p~~~~~~~~~~~~~~ 328 (541)
T TIGR03388 249 TVKDIDIYSGETYSVLLTTDQDPSRNYWISVGVRGRKPNTPPGLTVLNYYPNSPSRLPPTPPPVTPAWDDFDRSKAFSLA 328 (541)
T ss_pred eeCeEEecCCCEEEEEEeCCCCCCCcEEEEEecccCCCCCccEEEEEEECCCCCCCCCCCCCCCCCCccccchhhccchh
Confidence 99999999999999999998854568999998766544456789999998654432222223334444443222212222
Q ss_pred ccccCCCCCCCCccceEEEEEeeeeccCCeEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCC
Q 012467 242 IFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVN 321 (463)
Q Consensus 242 ~~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 321 (463)
+......+.+|...++++.+.......++...|++||.+|..|..|.|.+...+..+.|+...++..+..+++....+..
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~s~~~p~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (541)
T TIGR03388 329 IKAAMGSPKPPETSDRRIVLLNTQNKINGYTKWAINNVSLTLPHTPYLGSLKYNLLNAFDQKPPPENYPRDYDIFKPPPN 408 (541)
T ss_pred hhccccCCCCCCCCCcEEEEeccCcccCceEEEEECcccCCCCCccHHHHHhhcCCccccCCCCcccccccccccCCCcc
Confidence 22211123344556777765544333345678999999999899999887766555445433333333333332222223
Q ss_pred CCccccceEEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcc-ccccCCCCCCCccceEEeCCC
Q 012467 322 ANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKE-DEKKFNLKNPPLKNTAVIFPY 400 (463)
Q Consensus 322 ~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~-~~~~~n~~~p~~rDTv~v~~~ 400 (463)
...+.++.++.++.|++|||+|+|.+.+.......||||||||+||||++|.|.|+.+ +...+|+.||++|||+.|+++
T Consensus 409 ~~~~~~~~~~~~~~g~~Vdivi~n~~~~~~~~~~~HP~HLHGh~F~vlg~g~g~~~~~~~~~~~n~~nP~~RDTv~vp~~ 488 (541)
T TIGR03388 409 PNTTTGNGIYRLKFNTTVDVILQNANTLNGNNSETHPWHLHGHDFWVLGYGEGKFRPGVDEKSYNLKNPPLRNTVVIFPY 488 (541)
T ss_pred cccccCceEEEecCCCeEEEEEECCccccCCCCCCCcEEecCCceEEEeeccCCCCcccCcccccCCCCCEeceEEeCCC
Confidence 3345567889999999999999997543111234899999999999999999999765 556799999999999999999
Q ss_pred cEEEEEEEcCCceeeeecccchHhHHccceeeeeccccccccCCCCCcccc
Q 012467 401 GWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACG 451 (463)
Q Consensus 401 g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~~~~~~~P~~~~~C~ 451 (463)
||++|||+|||||.|+|||||+||+..||+++|.|++++++++|+.++.|+
T Consensus 489 gwvvIRF~adNPG~W~~HCHi~~H~~~GM~~~~~e~~~~~~~~P~~~~~C~ 539 (541)
T TIGR03388 489 GWTALRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVEKVGKLPKEALGCG 539 (541)
T ss_pred ceEEEEEECCCCeEeeeeccchhhhhcccEEEEeccccccCCCCccccCCC
Confidence 999999999999999999999999999999999999999999999999997
|
Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. |
| >PLN02191 L-ascorbate oxidase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-87 Score=700.31 Aligned_cols=456 Identities=66% Similarity=1.189 Sum_probs=333.9
Q ss_pred cccccccceeEEEeccchhhhhcceeeEEEEeCCCCCCCCCCCCcceEEEEeeeecccHHHHHhhhcCCCCCCCCCCCeE
Q 012467 2 LDVWQVQAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTL 81 (463)
Q Consensus 2 ~~~~~~~~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~d~~ 81 (463)
|+|.+.|+||||||||++.|+.+||+|+|||+++.+..+++.||+|++|+|+||+++...+....+...+..+..++|++
T Consensus 111 Y~f~~~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~~d~~ 190 (574)
T PLN02191 111 YKFTVEKPGTHFYHGHYGMQRSAGLYGSLIVDVAKGPKERLRYDGEFNLLLSDWWHESIPSQELGLSSKPMRWIGEAQSI 190 (574)
T ss_pred EEEECCCCeEEEEeeCcHHHHhCCCEEEEEEccCCCCCCCCCCCeeEEEeeeccccCChHHHHHhhccCCCCcCCCCCce
Confidence 78899999999999999999999999999999876544567789999999999999875544333333333334678999
Q ss_pred EECCCCCCCCccccccCCC-CccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccce
Q 012467 82 LINGRGQFNCSLAAHFSNG-SAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQP 160 (463)
Q Consensus 82 liNG~~~~~~~~~~~~~~~-~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P 160 (463)
||||+++++|+.......+ ....|....+..+.+.+++|++||+|||||||+|+.+.+.|+||||+|+|||+||++++|
T Consensus 191 liNG~g~~~~~~~~~~~~~~~~~~~~~~~n~~~~p~~~~v~~G~~yRlRiINa~~~~~~~~~idgH~~tVIa~DG~~v~P 270 (574)
T PLN02191 191 LINGRGQFNCSLAAQFSNGTELPMCTFKEGDQCAPQTLRVEPNKTYRIRLASTTALASLNLAVQGHKLVVVEADGNYITP 270 (574)
T ss_pred EECCCCCCCCcccccccCCcccccceeccCCCCCceEEEEcCCCEEEEEEEecCCceeEEEEECCCeEEEEEcCCeeccc
Confidence 9999999988642111111 111233222334556689999999999999999999999999999999999999999999
Q ss_pred eeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCCCCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccc
Q 012467 161 FEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSN 240 (463)
Q Consensus 161 ~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~ 240 (463)
+.++.|.|++||||||+|++++.++++||||+.....+.......|||+|++......++.+.|..|.+.+.........
T Consensus 271 ~~v~~l~i~~GqRydVlV~a~~~~~~~y~ira~~~~~~~~~~~~~ail~Y~~~~~~~~p~~~~~~~p~~~~~~~~~~~~~ 350 (574)
T PLN02191 271 FTTDDIDIYSGESYSVLLTTDQDPSQNYYISVGVRGRKPNTTQALTILNYVTAPASKLPSSPPPVTPRWDDFERSKNFSK 350 (574)
T ss_pred eEeeeEEEcCCCeEEEEEECCCCCCCCEEEEEEccccCCCCCCceEEEEECCCCCCCCCCCCCCCCCcccccchhhcccc
Confidence 99999999999999999999984446899999876555334456799999865443222222233343433222211111
Q ss_pred cccccCCCCCCC-CccceEEEEEeeeeccCCeEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCC
Q 012467 241 KIFALMGSPKPP-TNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPP 319 (463)
Q Consensus 241 ~~~~~~~~~~~p-~~~d~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 319 (463)
.+......+.+| ...++.+.+... ....+...|+|||.+|..|..|.|.+...+..+.|+...++..+..+++..+..
T Consensus 351 ~~~~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~n~~s~~~p~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (574)
T PLN02191 351 KIFSAMGSPSPPKKYRKRLILLNTQ-NLIDGYTKWAINNVSLVTPATPYLGSVKYNLKLGFNRKSPPRSYRMDYDIMNPP 429 (574)
T ss_pred cccccccCCCCCCcccceEEEeccc-ceeCCeEEEEECcccCcCCCcchHHHHhhccCcccccCCCcccccccccccCCC
Confidence 221111112222 223455544322 112345689999999999999999887765555554333332222223221111
Q ss_pred CCCCccccceEEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcc-ccccCCCCCCCccceEEeC
Q 012467 320 VNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKE-DEKKFNLKNPPLKNTAVIF 398 (463)
Q Consensus 320 ~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~-~~~~~n~~~p~~rDTv~v~ 398 (463)
.....+.+..++.++.|++|||+|+|.+...+.....||||||||+||||++|.|.|+++ +...+|+.||++|||+.|+
T Consensus 430 ~~~~~~~~~~v~~~~~~~~Vdivi~n~~~~~~~~~~~HP~HLHGh~F~Vlg~G~g~~~~~~~~~~~nl~nP~rRDTv~vp 509 (574)
T PLN02191 430 PFPNTTTGNGIYVFPFNVTVDVIIQNANVLKGVVSEIHPWHLHGHDFWVLGYGDGKFKPGIDEKTYNLKNPPLRNTAILY 509 (574)
T ss_pred ccccccccceeEEecCCCEEEEEEECCCcccCCCCCCCCEEeCCCCeEEEEecCCCCCcccCcccccCCCCCcCCeEEeC
Confidence 111223456689999999999999997521001123899999999999999999999864 4467899999999999999
Q ss_pred CCcEEEEEEEcCCceeeeecccchHhHHccceeeeeccccccccCCCCCccccCcccCCC
Q 012467 399 PYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACGLTGKRFM 458 (463)
Q Consensus 399 ~~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~~~~~~~P~~~~~C~~~~~~~~ 458 (463)
++||++|||++||||+|+|||||+||+..||+++|+|++++++++|+.++.|+.++.+.+
T Consensus 510 ~~Gw~vIRf~aDNPG~Wl~HCHi~~Hl~~Gm~~~~~e~~~~~~~~p~~~~~C~~~~~~~~ 569 (574)
T PLN02191 510 PYGWTAIRFVTDNPGVWFFHCHIEPHLHMGMGVVFAEGLNRIGKIPDEALGCGLTKQFLM 569 (574)
T ss_pred CCCEEEEEEECCCCEEEEEecCchhhhhcCCEEEEecChhhccCCCcchhhhhccccccc
Confidence 999999999999999999999999999999999999999999999999999998877655
|
|
| >PLN02604 oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-86 Score=692.77 Aligned_cols=451 Identities=52% Similarity=0.964 Sum_probs=335.4
Q ss_pred cccccccceeEEEeccchhhhhcceeeEEEEeCCCCCCCCCCCCcceEEEEeeeecccHHHHHhhhcCCCCCCCCCCCeE
Q 012467 2 LDVWQVQAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTL 81 (463)
Q Consensus 2 ~~~~~~~~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~d~~ 81 (463)
|+|.+.|+||||||||.+.|+.+||+|+|||+++++++.|+.||+|++|+|+||+++...+...........+..++|++
T Consensus 112 y~f~~~~~Gt~wyH~H~~~q~~~Gl~G~liV~~~~~~~~p~~~d~d~~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~~d~~ 191 (566)
T PLN02604 112 YEFVVDRPGTYLYHAHYGMQREAGLYGSIRVSLPRGKSEPFSYDYDRSIILTDWYHKSTYEQALGLSSIPFDWVGEPQSL 191 (566)
T ss_pred EEEEcCCCEEEEEeeCcHHHHhCCCeEEEEEEecCCCCCccccCcceEEEeeccccCCHHHHHHhhccCCCccCCCCCce
Confidence 78999999999999999999999999999999987666788899999999999999988776655543332223578999
Q ss_pred EECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCccccee
Q 012467 82 LINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPF 161 (463)
Q Consensus 82 liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~ 161 (463)
||||+++++|+....- ......|+ ..+..+.+++++|++||+|||||||+|+.+.++|+||||+|+|||+||++++|+
T Consensus 192 liNG~G~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~v~~g~~~RlRlINa~~~~~~~~sidgH~~~VIa~DG~~v~P~ 269 (566)
T PLN02604 192 LIQGKGRYNCSLVSSP-YLKAGVCN-ATNPECSPYVLTVVPGKTYRLRISSLTALSALSFQIEGHNMTVVEADGHYVEPF 269 (566)
T ss_pred EEcCCCCCCCccccCc-cccccccc-cCCCCCCceEEEecCCCEEEEEEEeccccceEEEEECCCEEEEEEeCCEecccc
Confidence 9999999988741100 00001233 223345667899999999999999999999999999999999999999999999
Q ss_pred eEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCCCCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCccccccccc
Q 012467 162 EVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNK 241 (463)
Q Consensus 162 ~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~ 241 (463)
+++.|.|++||||||+|++++.++++||||+.....+.+...++|||+|+++.....++...+..+.+.+..........
T Consensus 270 ~v~~l~l~~GqRydvlV~~~~~~~~~y~ira~~~~~~~~~~~~~aIL~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (566)
T PLN02604 270 VVKNLFIYSGETYSVLVKADQDPSRNYWVTTSVVSRNNTTPPGLAIFNYYPNHPRRSPPTVPPSGPLWNDVEPRLNQSLA 349 (566)
T ss_pred eeeeEEEccCCeEEEEEECCCCCCCCEEEEEecccCCCCCcceeEEEEECCCCCCCCCCCCCCCCCcccccchhhcchhc
Confidence 99999999999999999999843458999987655554457789999998543221111122222233332211111111
Q ss_pred ccccCC-CCCCCCccceEEEEEeeeeccCCeEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCC-CCcccCCCC
Q 012467 242 IFALMG-SPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFS-NEYDVMKPP 319 (463)
Q Consensus 242 ~~~~~~-~~~~p~~~d~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~ 319 (463)
+..... ...++...++++.+....+..++...|+|||.+|..|..|.|.+......+.|+...+|..+. ..++.....
T Consensus 350 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~w~in~~~~~~p~~p~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (566)
T PLN02604 350 IKARHGYIHPPPLTSDRVIVLLNTQNEVNGYRRWSVNNVSFNLPHTPYLIALKENLTGAFDQTPPPEGYDFANYDIYAKP 429 (566)
T ss_pred ccccccCcCCCCCCCCeEEEEeccccccCCeEEEEECcccCCCCCCchhHhhhhcCCCcccCCCCCcccccccccccCCc
Confidence 111111 112334557777665444333456789999999998999988877665555554332332221 011111111
Q ss_pred CCCCccccceEEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcc-ccccCCCCCCCccceEEeC
Q 012467 320 VNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKE-DEKKFNLKNPPLKNTAVIF 398 (463)
Q Consensus 320 ~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~-~~~~~n~~~p~~rDTv~v~ 398 (463)
.+.+.+.+..++.++.|++||++|+|.+.+.......||||||||+||||++|.|.|++. +...+|+.||++|||+.|+
T Consensus 430 ~~~~~~~~~~v~~~~~~~~Vdivi~n~~~~~~~~~~~HP~HLHGH~F~Vlg~G~G~~~~~~~~~~~nl~nP~rRDTv~vp 509 (566)
T PLN02604 430 NNSNATSSDSIYRLQFNSTVDIILQNANTMNANNSETHPWHLHGHDFWVLGYGEGKFNMSSDPKKYNLVDPIMKNTVPVH 509 (566)
T ss_pred cccccccCceEEEccCCCeEEEEEECCccccCCCCCCCCEEecCCceEEEEecCCCCCccccccccCCCCCCccceEEeC
Confidence 111234456789999999999999997543111234899999999999999999999865 4567999999999999999
Q ss_pred CCcEEEEEEEcCCceeeeecccchHhHHccceeeeeccccccccCCCCCccccCcc
Q 012467 399 PYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACGLTG 454 (463)
Q Consensus 399 ~~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~~~~~~~P~~~~~C~~~~ 454 (463)
++||++|||+|||||.|+|||||+||+..||+++|.|++++++++|..++.|+..+
T Consensus 510 ~~gwvvIRF~aDNPG~WlfHCHI~~Hl~~GM~~v~~e~~~~~~~~p~~~~~C~~~~ 565 (566)
T PLN02604 510 PYGWTALRFRADNPGVWAFHCHIESHFFMGMGVVFEEGIERVGKLPSSIMGCGESK 565 (566)
T ss_pred CCceEEEEEECCCCeEeeEeecchhHhhcCCEEEEeeChhhccCCCCCcCccccCC
Confidence 99999999999999999999999999999999999999999999999999998653
|
|
| >PLN00044 multi-copper oxidase-related protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-83 Score=663.57 Aligned_cols=415 Identities=26% Similarity=0.447 Sum_probs=316.2
Q ss_pred ccccc-ccceeEEEeccchhhhhcceeeEEEEeCCCCCCCCCCC--CcceEEEEeeeecccHHHHHhhhcCCCCCCCCCC
Q 012467 2 LDVWQ-VQAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHY--DGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEP 78 (463)
Q Consensus 2 ~~~~~-~~~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~~~p~~~--d~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~ 78 (463)
|+|.+ .|+||||||||++.|+++||+|+|||+++++.+.|+.+ ++|++|+|+||++++..++...+ ..+.. ...+
T Consensus 115 Y~F~~~dq~GT~WYHsH~~~Q~~~Gl~GalII~~~~~~~~P~~~~~~~e~~i~l~DW~~~~~~~~~~~l-~~g~~-~~~~ 192 (596)
T PLN00044 115 YQFQVKDQVGSFFYAPSTALHRAAGGYGAITINNRDVIPIPFGFPDGGDITLFIADWYARDHRALRRAL-DAGDL-LGAP 192 (596)
T ss_pred EEEEeCCCCceeEeeccchhhhhCcCeeEEEEcCcccccccccCCcccceEEEecccccCCHHHHHHHH-hcCCC-CCCC
Confidence 78888 49999999999999999999999999998765566654 47999999999999876543322 22222 4578
Q ss_pred CeEEECCCCCC--CCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCc
Q 012467 79 QTLLINGRGQF--NCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGN 156 (463)
Q Consensus 79 d~~liNG~~~~--~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~ 156 (463)
|++||||++.. +|+. . ..+...++++|++||+|||||||++..+.+.|+|+||+|+|||+||.
T Consensus 193 d~~lING~g~~~~n~~~----------~-----~~~~~~~~i~V~~Gk~yRlRiINaa~~~~~~fsIdgH~mtVIa~DG~ 257 (596)
T PLN00044 193 DGVLINAFGPYQYNDSL----------V-----PPGITYERINVDPGKTYRFRVHNVGVATSLNFRIQGHNLLLVEAEGS 257 (596)
T ss_pred CceEEcccCccccCCcc----------c-----cCCCccceEEECCCCEEEEEEEEccCCceEEEEECCCEEEEEEeCCc
Confidence 99999999875 2321 0 01233458999999999999999999999999999999999999999
Q ss_pred ccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEec-CCC--CCCCCeEEEEEeCCCCCCCCCCCCCCCCCC-CCCC
Q 012467 157 YVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVR-GRK--PATPPALTLLNYHPTSASKIPLSPPPITPR-WDDY 232 (463)
Q Consensus 157 ~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~-~~~--~~~~~~~a~l~y~~~~~~~~~~~~~p~~p~-~~~~ 232 (463)
+++|+.++.|.|++||||||+|++++..+++||||+... ..+ .+...+.|||+|+++...... +.|..|. +.+.
T Consensus 258 ~v~P~~vd~i~I~~GQRydVLV~a~q~~~~~Y~i~a~~~~~~~~~~~~~~~~AIl~Y~~~~~~~~~--~~P~~p~~~~d~ 335 (596)
T PLN00044 258 YTSQQNYTNLDIHVGQSYSFLLTMDQNASTDYYVVASARFVDAAVVDKLTGVAILHYSNSQGPASG--PLPDAPDDQYDT 335 (596)
T ss_pred ccCceeeeeEEEcCCceEEEEEECCCCCCCceEEEEecccccCccccCcceeEEEEECCCCCCCCC--CCCCCCcccCCc
Confidence 999999999999999999999999984345899998642 222 255678899999875432111 1344443 4555
Q ss_pred cccccccccccccCCC---CCCCCccceEEEEEeeee---------ccCCeEEEEEecccCCCCCCCCccccccCCCCCC
Q 012467 233 DHSKSFSNKIFALMGS---PKPPTNFHRRLTLLNTQN---------TINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAF 300 (463)
Q Consensus 233 ~~~~~~~~~~~~~~~~---~~~p~~~d~~~~~~~~~~---------~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~ 300 (463)
..+..+...++..... .++|...++...+...+. ...+...|+|||.+|..|++|+|.+.+++.++.|
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~s~Nnvsf~~p~~p~L~a~~~~~~gv~ 415 (596)
T PLN00044 336 AFSINQARSIRWNVTASGARPNPQGSFHYGDITVTDVYLLQSMAPELIDGKLRATLNEISYIAPSTPLMLAQIFNVPGVF 415 (596)
T ss_pred hhhhhhhHhhhhccCCCcCCCCCcccceeeEEeeeeeeeeccccccccCCeEEEEECcccCCCCCCcchhhhhccCCCcc
Confidence 4333333333322211 122322233322222211 0124578999999999999999977776766655
Q ss_pred CC---CCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCC
Q 012467 301 DQ---NGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFT 377 (463)
Q Consensus 301 ~~---~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~ 377 (463)
+. ..+|. .....++.++.++.|++|||+|+|.... .||||||||+|+||++|.|.|+
T Consensus 416 ~~~fp~~pp~--------------~~~~~~t~v~~~~~n~~VeiV~qn~~~~------~HP~HLHGh~F~Vvg~G~G~~~ 475 (596)
T PLN00044 416 KLDFPNHPMN--------------RLPKLDTSIINGTYKGFMEIIFQNNATN------VQSYHLDGYAFFVVGMDYGLWT 475 (596)
T ss_pred cCCCCCCCCc--------------cccccCceEEEcCCCCEEEEEEeCCCCC------CCCeeEcCccEEEEeecCCCCC
Confidence 32 22221 1123356789999999999999997555 8999999999999999999999
Q ss_pred ccccccCCCCCCCccceEEeCCCcEEEEEEEcCCceeeeecccchHhHHccceeee-----ecc-ccccccCCCCCcccc
Q 012467 378 KEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVL-----ALG-VETVGNIPNQALACG 451 (463)
Q Consensus 378 ~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~-----~~~-~~~~~~~P~~~~~C~ 451 (463)
..++..+|+.||++|||+.|+++||++|||++||||+|+|||||+.|+..||.++| .++ .++++++|++++.||
T Consensus 476 ~~~~~~~Nl~nPp~RdTv~vp~~gW~aIRF~aDNPG~W~lHCH~~~h~~~Gm~~~~~v~~~~~~~~~~~~~pP~~~~~Cg 555 (596)
T PLN00044 476 DNSRGTYNKWDGVARSTIQVFPGAWTAILVFLDNAGIWNLRVENLDAWYLGQEVYINVVNPEDNSNKTVLPIPDNAIFCG 555 (596)
T ss_pred CCcccccccCCCCccceEEeCCCCeEEEEEecCCCEEehhhccCchhhcccCcEEEEEecCCCCccccccCCCcccCccc
Confidence 77777899999999999999999999999999999999999999999999999998 333 467889999999998
Q ss_pred Cccc
Q 012467 452 LTGK 455 (463)
Q Consensus 452 ~~~~ 455 (463)
..+.
T Consensus 556 ~~~~ 559 (596)
T PLN00044 556 ALSS 559 (596)
T ss_pred cccc
Confidence 6644
|
|
| >PLN02991 oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-82 Score=654.40 Aligned_cols=405 Identities=26% Similarity=0.476 Sum_probs=308.9
Q ss_pred ccccc-ccceeEEEeccchhhhhcceeeEEEEeCCCCCCCCC-CCCcceEEEEeeeecccHHHHHhhhcCCCCCCCCCCC
Q 012467 2 LDVWQ-VQAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPF-HYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQ 79 (463)
Q Consensus 2 ~~~~~-~~~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~~~p~-~~d~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~d 79 (463)
|+|.+ .|+||||||||.+.|+.+||+|+|||+++++++.|+ .+|+|++|+|+||+++...++...+. .+.. .+++|
T Consensus 114 Y~F~~~~q~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~~~p~~~~d~d~~i~l~DW~~~~~~~~~~~~~-~~~~-~~~~d 191 (543)
T PLN02991 114 YALQVKDQIGSFYYFPSLGFHKAAGGFGAIRISSRPLIPVPFPAPADDYTVLIGDWYKTNHKDLRAQLD-NGGK-LPLPD 191 (543)
T ss_pred EEEEeCCCCcceEEecCcchhhhCCCeeeEEEeCCcccCcccccccceeEEEecceecCCHHHHHHHhh-cCCC-CCCCC
Confidence 78888 499999999999999999999999999987656666 46899999999999998766544432 2222 56899
Q ss_pred eEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccc
Q 012467 80 TLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQ 159 (463)
Q Consensus 80 ~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~ 159 (463)
++||||++.. ++++|++||+|||||||+|+.+.+.|+|+||+|+|||+||++++
T Consensus 192 ~~liNG~~~~--------------------------~~~~v~~G~~yRlRiINa~~~~~~~~~idgH~~tVIa~DG~~~~ 245 (543)
T PLN02991 192 GILINGRGSG--------------------------ATLNIEPGKTYRLRISNVGLQNSLNFRIQNHTMKLVEVEGTHTI 245 (543)
T ss_pred EEEEccCCCC--------------------------ceEEECCCCEEEEEEEeccCCeeEEEEECCCEEEEEEeCCcccc
Confidence 9999999763 26899999999999999999999999999999999999999999
Q ss_pred eeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCCCCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcc--ccc
Q 012467 160 PFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDH--SKS 237 (463)
Q Consensus 160 P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~--~~~ 237 (463)
|..++.|.|++||||||+|++++ +.++||||+...... ......|||+|++++..... +.|..|.-..... ...
T Consensus 246 p~~~~~l~i~~GQRydvlv~a~~-~~~~y~i~~~~~~~~-~~~~~~AIl~Y~g~~~~~~~--~~p~~p~~~~~~~~~~~~ 321 (543)
T PLN02991 246 QTPFSSLDVHVGQSYSVLITADQ-PAKDYYIVVSSRFTS-KILITTGVLHYSNSAGPVSG--PIPDGPIQLSWSFDQARA 321 (543)
T ss_pred ceeeeEEEEcCCcEEEEEEECCC-CCCcEEEEEeeccCC-CCcceEEEEEeCCCCCCCCC--CCCCCCccccccccchhh
Confidence 99999999999999999999999 578999999864332 33567899999976432111 1222221100000 001
Q ss_pred ccccccccCCCCCCCC--------ccceEEEEEeeeeccCCeEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCC
Q 012467 238 FSNKIFALMGSPKPPT--------NFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENF 309 (463)
Q Consensus 238 ~~~~~~~~~~~~~~p~--------~~d~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~ 309 (463)
....+.+... .+.|. ..++.+.+.......++...|+|||.+|..|++|+|.+.++..++.|....-+
T Consensus 322 ~~~~l~p~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iN~~s~~~p~~p~L~~~~~~~~g~~~~~~~~--- 397 (543)
T PLN02991 322 IKTNLTASGP-RPNPQGSYHYGKINITRTIRLANSAGNIEGKQRYAVNSASFYPADTPLKLADYFKIAGVYNPGSIP--- 397 (543)
T ss_pred hhhcccCCCC-CCCCCccccccccccceeEEEeecccccCceEEEEECCCccCCCCCChhhhhhhcccCcccccccc---
Confidence 1112222111 11121 12333333322222235578999999999999999987776666655321001
Q ss_pred CCCcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCC
Q 012467 310 SNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNP 389 (463)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p 389 (463)
..+.+......+.++.++.|++|||+|+|.+.. .||||||||+||||++|.|.|+..++..+|+.||
T Consensus 398 -------~~~~~~~~~~~~~v~~~~~~~~VeiViqn~~~~------~HP~HLHGh~F~Vvg~G~G~f~~~~~~~~Nl~nP 464 (543)
T PLN02991 398 -------DQPTNGAIFPVTSVMQTDYKAFVEIVFENWEDI------VQTWHLDGYSFYVVGMELGKWSAASRKVYNLNDA 464 (543)
T ss_pred -------ccCCCCccccCCcEEEcCCCCEEEEEEeCCCCC------CCCeeeCCcceEEEEeCCCCCCcccccccCCCCC
Confidence 000011122335578999999999999998766 8999999999999999999998766678999999
Q ss_pred CccceEEeCCCcEEEEEEEcCCceeeeecccchHhHHccceeee-----eccccccccCCCCCccccCccc
Q 012467 390 PLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVL-----ALGVETVGNIPNQALACGLTGK 455 (463)
Q Consensus 390 ~~rDTv~v~~~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~-----~~~~~~~~~~P~~~~~C~~~~~ 455 (463)
++|||+.||++||++|||++||||+|+|||||..|+..||.+++ .++.++++++|++++.||..++
T Consensus 465 ~rRDTv~vp~~Gw~vIRF~aDNPG~W~~HCHi~~h~~~gm~~~~~v~~~~~~~~~~~~~P~~~~~Cg~~~~ 535 (543)
T PLN02991 465 VSRCTVQVYPRSWTAIYVSLDNVGMWNLRSELWERQYLGQQFYMRVYTTSTSLRDEYLIPKNALLCGRATG 535 (543)
T ss_pred CcccEEEECCCCEEEEEEECCCCEEeeeeeCccccccccEEEEEEecCCCCccccccCCCcccCccccCCC
Confidence 99999999999999999999999999999999999999999999 5566788999999999986554
|
|
| >PLN02835 oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-82 Score=656.02 Aligned_cols=405 Identities=28% Similarity=0.467 Sum_probs=305.6
Q ss_pred ccccc-ccceeEEEeccchhhhhcceeeEEEEeCCCCCCCCC-CCCcceEEEEeeeecccHHHHHhhhcCCCCCCCCCCC
Q 012467 2 LDVWQ-VQAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPF-HYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQ 79 (463)
Q Consensus 2 ~~~~~-~~~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~~~p~-~~d~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~d 79 (463)
|+|.+ .|+||||||||++.|+++||+|+|||+++++.+.|+ .+|+|++|+|+||+++...++...+.. +.. .+.+|
T Consensus 115 Y~F~~~~q~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~~~p~~~~d~e~~l~l~Dw~~~~~~~~~~~~~~-g~~-~~~~d 192 (539)
T PLN02835 115 YKFQTKDQIGTFTYFPSTLFHKAAGGFGAINVYERPRIPIPFPLPDGDFTLLVGDWYKTSHKTLQQRLDS-GKV-LPFPD 192 (539)
T ss_pred EEEEECCCCEeEEEEeCccchhcCcccceeEEeCCCCCCcCCCCCCceEEEEeeccccCCHHHHHHHhhc-CCC-CCCCc
Confidence 78876 589999999999999999999999998765444454 459999999999999987765444433 222 56889
Q ss_pred eEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccc
Q 012467 80 TLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQ 159 (463)
Q Consensus 80 ~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~ 159 (463)
++||||+..+ .++|++||+|||||||+|+.+.+.|+|+||+|+|||+||++++
T Consensus 193 ~~liNG~~~~---------------------------~~~v~~G~~yRlRliNa~~~~~~~f~i~gH~~~VI~~DG~~v~ 245 (539)
T PLN02835 193 GVLINGQTQS---------------------------TFSGDQGKTYMFRISNVGLSTSLNFRIQGHTMKLVEVEGSHTI 245 (539)
T ss_pred eEEEccccCc---------------------------eEEECCCCEEEEEEEEcCCCccEEEEECCCEEEEEEECCccCC
Confidence 9999999864 6899999999999999999999999999999999999999999
Q ss_pred eeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCCCCCCeEEEEEeCCCCCCCCCCCCCCCCCCCC---CCcccc
Q 012467 160 PFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWD---DYDHSK 236 (463)
Q Consensus 160 P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~---~~~~~~ 236 (463)
|..++.|.|++||||||+|++++ ++|+||||+.....+ ......|+|+|+++.... +.+.|..|... +.....
T Consensus 246 p~~~~~l~i~~GqRydvlv~~~~-~~g~y~i~a~~~~~~-~~~~~~ail~Y~~~~~~~--~~~~p~~p~~~~~~~~~~~~ 321 (539)
T PLN02835 246 QNIYDSLDVHVGQSVAVLVTLNQ-SPKDYYIVASTRFTR-QILTATAVLHYSNSRTPA--SGPLPALPSGELHWSMRQAR 321 (539)
T ss_pred CceeeEEEECcCceEEEEEEcCC-CCCcEEEEEEccccC-CCcceEEEEEECCCCCCC--CCCCCCCCccccccccchhh
Confidence 99999999999999999999998 468999998653332 335678999998653211 11122222210 000000
Q ss_pred cccccccccCCCCCCC-------CccceEEEEEeeeeccCCeEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCC
Q 012467 237 SFSNKIFALMGSPKPP-------TNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENF 309 (463)
Q Consensus 237 ~~~~~~~~~~~~~~~p-------~~~d~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~ 309 (463)
.....+......+.+. ...++++.+.......++...|+|||.+|..|+.|.|.+.+++..+.|.....+
T Consensus 322 ~~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~w~iN~~s~~~p~~P~L~~~~~~~~~~~~~~~~~--- 398 (539)
T PLN02835 322 TYRWNLTASAARPNPQGSFHYGKITPTKTIVLANSAPLINGKQRYAVNGVSYVNSDTPLKLADYFGIPGVFSVNSIQ--- 398 (539)
T ss_pred ccccccCccccCCCCCccccccccCCCceEEEeccccccCCeEEEEECCcccCCCCCChhhhhhhcCCCccccCccc---
Confidence 0000111111001100 112445544332222345678999999999999998876665544444211100
Q ss_pred CCCcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCC
Q 012467 310 SNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNP 389 (463)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p 389 (463)
..+.+...+.++.++.++.|++|+|+|+|.+.. .||||||||+||||++|.|.|+......+|+.||
T Consensus 399 -------~~~~~~~~~~~t~~~~~~~~~~Veivi~N~~~~------~HP~HLHGh~F~Vlg~G~g~~~~~~~~~~nl~nP 465 (539)
T PLN02835 399 -------SLPSGGPAFVATSVMQTSLHDFLEVVFQNNEKT------MQSWHLDGYDFWVVGYGSGQWTPAKRSLYNLVDA 465 (539)
T ss_pred -------cCCCCCccccCCeEEEcCCCCEEEEEEECCCCC------CCCCCCCCccEEEEeccCCCCCcccccccCCCCC
Confidence 011111234456789999999999999998766 8999999999999999999997655566899999
Q ss_pred CccceEEeCCCcEEEEEEEcCCceeeeecccchHhHHccceeee-----eccccccccCCCCCccccCccc
Q 012467 390 PLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVL-----ALGVETVGNIPNQALACGLTGK 455 (463)
Q Consensus 390 ~~rDTv~v~~~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~-----~~~~~~~~~~P~~~~~C~~~~~ 455 (463)
++|||+.|+++||++|||+|||||+|+|||||++|+..||+++| .++.++++++|+.++.||..+.
T Consensus 466 ~~RDTv~vp~~gw~~IrF~aDNPG~Wl~HCHi~~H~~~Gm~~~~~V~~~~~~~~~~~~~P~~~~~Cg~~~~ 536 (539)
T PLN02835 466 LTRHTAQVYPKSWTTILVSLDNQGMWNMRSAIWERQYLGQQFYLRVWNQVHSLANEYDIPDNALLCGKAIG 536 (539)
T ss_pred CccceEEeCCCCEEEEEEECcCCEEeeeeecchhhhhcccEEEEEEccCCCccccccCCCccccccccCcc
Confidence 99999999999999999999999999999999999999999999 4556788999999999986654
|
|
| >PLN02792 oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-82 Score=653.96 Aligned_cols=405 Identities=28% Similarity=0.463 Sum_probs=311.0
Q ss_pred cccccc-cceeEEEeccchhhhhcceeeEEEEeCCCCCCCCCC-CCcceEEEEeeeecccHHHHHhhhcCCCCCCCCCCC
Q 012467 2 LDVWQV-QAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFH-YDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQ 79 (463)
Q Consensus 2 ~~~~~~-~~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~~~p~~-~d~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~d 79 (463)
|+|.+. |+||||||||.+.|+.+||+|+|||+++++.+.|+. +|+|++|+|+||+++...++.. ....+.....++|
T Consensus 102 Y~F~~~~q~GT~WYHsH~~~q~~~Gl~G~liI~~~~~~~~p~~~~d~e~~i~l~Dw~~~~~~~~~~-~~~~g~~~~~~~d 180 (536)
T PLN02792 102 YDFQVKDQVGSYFYFPSLAVQKAAGGYGSLRIYSLPRIPVPFPEPAGDFTFLIGDWYRRNHTTLKK-ILDGGRKLPLMPD 180 (536)
T ss_pred EEEEeCCCccceEEecCcchhhhcccccceEEeCCcccCcCCCcccceeEEEecccccCCHHHHHH-HhhccCcCCCCCC
Confidence 788884 999999999999999999999999998765445554 6889999999999998766433 2223322133789
Q ss_pred eEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccc
Q 012467 80 TLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQ 159 (463)
Q Consensus 80 ~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~ 159 (463)
++||||++...| ++|+|++||+|||||||+|..+.+.|+|+||+|+|||+||++++
T Consensus 181 ~~liNG~~~~~~------------------------~~~~v~~Gk~yRlRliNa~~~~~~~f~i~gH~~tVI~~DG~~v~ 236 (536)
T PLN02792 181 GVMINGQGVSYV------------------------YSITVDKGKTYRFRISNVGLQTSLNFEILGHQLKLIEVEGTHTV 236 (536)
T ss_pred EEEEeccCCCCc------------------------ceEEECCCCEEEEEEEEcCCCceEEEEECCcEEEEEEeCCccCC
Confidence 999999987522 37999999999999999999999999999999999999999999
Q ss_pred eeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCCCCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCccccccc
Q 012467 160 PFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFS 239 (463)
Q Consensus 160 P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~ 239 (463)
|..++.|.|++||||||+|++++ ++|+|||++.....+ ......|||+|+++..... ..|..|.+++...+..+.
T Consensus 237 p~~~~~l~i~~GqRydVlV~a~~-~~g~Y~i~a~~~~~~-~~~~~~ail~Y~g~~~~~~---~~p~~p~~~~~~~~~~~~ 311 (536)
T PLN02792 237 QSMYTSLDIHVGQTYSVLVTMDQ-PPQNYSIVVSTRFIA-AKVLVSSTLHYSNSKGHKI---IHARQPDPDDLEWSIKQA 311 (536)
T ss_pred CcceeEEEEccCceEEEEEEcCC-CCceEEEEEEeccCC-CCCceEEEEEECCCCCCCC---CCCCCCCcCCccccccch
Confidence 99999999999999999999998 578999999865433 3456789999987543211 123333344333322221
Q ss_pred ccccccC--C-CCCCCCc--------cceEEEEEeeeeccCCeEEEEEecccCCCCCCCCccccccCCCCCCC----CCC
Q 012467 240 NKIFALM--G-SPKPPTN--------FHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFD----QNG 304 (463)
Q Consensus 240 ~~~~~~~--~-~~~~p~~--------~d~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~----~~~ 304 (463)
..++... + ....|+. .++++.+.......++...|+|||.+|..|++|+|.+.++++.+.+. +..
T Consensus 312 ~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~s~~~p~~p~L~a~~~~~~g~~~~~~~~~~ 391 (536)
T PLN02792 312 QSIRTNLTASGPRTNPQGSYHYGKMKISRTLILESSAALVKRKQRYAINGVSFVPSDTPLKLADHFKIKGVFKVGSIPDK 391 (536)
T ss_pred hhhhhccCCCCCCCCCCcccccceeccceeEEecccccccCceeEEEECCcccCCCCCchhhhhhhccCCCcCcccCccC
Confidence 1111111 1 1122222 12333333222222345789999999999999999877665555432 112
Q ss_pred CCCCCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccC
Q 012467 305 PPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKF 384 (463)
Q Consensus 305 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~ 384 (463)
+|..+ ....++.++.++.|++|||+|+|.... .||||||||+||||++|.|.|++.++..+
T Consensus 392 p~~~~-------------~~~~~~~v~~~~~~~~VeiViqn~~~~------~HP~HLHGh~F~Vvg~G~G~~~~~~~~~~ 452 (536)
T PLN02792 392 PRRGG-------------GMRLDTSVMGAHHNAFLEIIFQNREKI------VQSYHLDGYNFWVVGINKGIWSRASRREY 452 (536)
T ss_pred CcccC-------------CCccCceEEEcCCCCEEEEEEECCCCC------CCCeeeCCCceEEEeecCCCCCccccccc
Confidence 22110 112346688999999999999997665 89999999999999999999987667789
Q ss_pred CCCCCCccceEEeCCCcEEEEEEEcCCceeeeecccchHhHHccceeee-----eccccccccCCCCCccccCccc
Q 012467 385 NLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVL-----ALGVETVGNIPNQALACGLTGK 455 (463)
Q Consensus 385 n~~~p~~rDTv~v~~~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~-----~~~~~~~~~~P~~~~~C~~~~~ 455 (463)
|+.||++||||.|+++||++|||+|||||+|+||||+..|+..||.++| .++.++++++|++++.||..+.
T Consensus 453 Nl~nP~~RdTv~v~~~gw~aIRf~aDNPGvW~~HCh~~~h~~~Gm~~~~~v~~~~~~~~~~~~pP~~~~~Cg~~~~ 528 (536)
T PLN02792 453 NLKDAISRSTTQVYPESWTAVYVALDNVGMWNLRSQFWARQYLGQQFYLRVYSPTHSLKDEYPLPKNALLCGRASN 528 (536)
T ss_pred CcCCCCccceEEECCCCEEEEEEEeeCCEEEeeeEcchhccccceEEEEEEccCCCccccccCCCcccCccccccC
Confidence 9999999999999999999999999999999999999999999999999 4666788999999999986544
|
|
| >PLN02354 copper ion binding / oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-81 Score=645.94 Aligned_cols=410 Identities=27% Similarity=0.503 Sum_probs=303.6
Q ss_pred ccccc-ccceeEEEeccchhhhhcceeeEEEEeCCCCCCCCCC-CCcceEEEEeeeecccHHHHHhhhcCCCCCCCCCCC
Q 012467 2 LDVWQ-VQAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFH-YDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQ 79 (463)
Q Consensus 2 ~~~~~-~~~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~~~p~~-~d~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~d 79 (463)
|+|.+ .|+||||||||++.|+++||+|+|||+++++.+.|++ +|+|++|+|+||+++...++...+. .+.. .+.+|
T Consensus 113 Y~F~~~~q~GT~WYHsH~~~Q~~~Gl~G~lII~~~~~~~~p~~~~d~e~~l~l~Dw~~~~~~~~~~~~~-~g~~-~~~~d 190 (552)
T PLN02354 113 YHFQPKDQIGSYFYYPSTGMHRAAGGFGGLRVNSRLLIPVPYADPEDDYTVLIGDWYTKSHTALKKFLD-SGRT-LGRPD 190 (552)
T ss_pred EEEEeCCCCcceEEecCccceecCCccceEEEcCCcCCCCCCCCcCceEEEEeeeeccCCHHHHHHHHh-cCCC-CCCCC
Confidence 78887 4899999999999999999999999999875455653 4789999999999998766543322 2222 45789
Q ss_pred eEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccc
Q 012467 80 TLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQ 159 (463)
Q Consensus 80 ~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~ 159 (463)
++||||++...| ....++++|++||+|||||||+|+...+.|+|+||+|+|||+||++++
T Consensus 191 ~~liNG~~~~~~--------------------~~~~~~~~v~~Gk~yRlRiINa~~~~~~~f~IdgH~~tVIa~DG~~v~ 250 (552)
T PLN02354 191 GVLINGKSGKGD--------------------GKDEPLFTMKPGKTYRYRICNVGLKSSLNFRIQGHKMKLVEMEGSHVL 250 (552)
T ss_pred eEEEeCCcCCCC--------------------CCCceEEEECCCCEEEEEEEecCCCceEEEEECCceEEEEEeCCcccC
Confidence 999999976421 112357999999999999999999999999999999999999999999
Q ss_pred eeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCCCCCCeEEEEEeCCCCCCCCCCCCCCCCCC-CC-CCccccc
Q 012467 160 PFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPR-WD-DYDHSKS 237 (463)
Q Consensus 160 P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~~~~~~~a~l~y~~~~~~~~~~~~~p~~p~-~~-~~~~~~~ 237 (463)
|..++.|.|++||||||+|++++ ++|+|||++.....+ ......|+|+|+++.....+ ..|..+. +. .......
T Consensus 251 p~~~~~l~i~~GqRydVlv~a~~-~~g~Y~i~a~~~~~~-~~~~~~ail~Y~g~~~~~~~--~~p~~~~~~~~~~~~~~~ 326 (552)
T PLN02354 251 QNDYDSLDVHVGQCFSVLVTANQ-APKDYYMVASTRFLK-KVLTTTGIIRYEGGKGPASP--ELPEAPVGWAWSLNQFRS 326 (552)
T ss_pred CcceeEEEEccCceEEEEEECCC-CCCcEEEEEeccccC-CCccEEEEEEECCCCCCCCC--CCCCCCcccccchhhhhh
Confidence 99999999999999999999998 568999999753332 34567899999875432111 1221111 00 0000001
Q ss_pred ccccccccCCCCCC-------CCccceEEEEEeeeeccCCeEEEEEecccCCCCCCCCccccccCCC-CCCC----CCCC
Q 012467 238 FSNKIFALMGSPKP-------PTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLK-DAFD----QNGP 305 (463)
Q Consensus 238 ~~~~~~~~~~~~~~-------p~~~d~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~-~~~~----~~~~ 305 (463)
....+......+.+ ....++++.+.......++...|+|||.+|..|++|.|.+.+++.. +.+. +..+
T Consensus 327 ~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iNn~s~~~p~~P~L~~~~~~~~~g~~~~~~~~~~p 406 (552)
T PLN02354 327 FRWNLTASAARPNPQGSYHYGKINITRTIKLVNSASKVDGKLRYALNGVSHVDPETPLKLAEYFGVADKVFKYDTIKDNP 406 (552)
T ss_pred hhhcccccccCCCCCCccccccccccceEEEecccccCCceEEEEECCccCCCCCCChHHhhhhcccCCccccCccccCC
Confidence 11111111110100 0123444544433222345678999999999999999887654332 3331 1122
Q ss_pred CCCCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCC
Q 012467 306 PENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFN 385 (463)
Q Consensus 306 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n 385 (463)
|..+ .....+..++.++.|++|||+|+|.+.. .||||||||+||||++|.|.|+..++..+|
T Consensus 407 p~~~------------~~~~~~~~v~~~~~~~~VeiVi~n~~~~------~HP~HLHGh~F~Vlg~G~G~~~~~~~~~~n 468 (552)
T PLN02354 407 PAKI------------TKIKIQPNVLNITFRTFVEIIFENHEKS------MQSWHLDGYSFFAVAVEPGTWTPEKRKNYN 468 (552)
T ss_pred cccc------------CccccCCeeEEcCCCCEEEEEEeCCCCC------CCCCcCCCccEEEEeecCCCCCccccccCC
Confidence 2110 0123345688999999999999998765 899999999999999999999876667899
Q ss_pred CCCCCccceEEeCCCcEEEEEEEcCCceeeeecccchHhHHccceeee--eccccc---cccCCCCCccccCccc
Q 012467 386 LKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVL--ALGVET---VGNIPNQALACGLTGK 455 (463)
Q Consensus 386 ~~~p~~rDTv~v~~~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~--~~~~~~---~~~~P~~~~~C~~~~~ 455 (463)
+.||++|||+.||++||++|||+|||||+|+|||||..|+..||.+++ .|+++. ++++|+..+.|+..++
T Consensus 469 l~nP~rRDTv~vp~~Gw~vIRF~aDNPGvW~~HCHi~~H~~~g~~l~~~v~~~~~~~~~~~~~P~~~~~C~~~~~ 543 (552)
T PLN02354 469 LLDAVSRHTVQVYPKSWAAILLTFDNAGMWNIRSENWERRYLGQQLYASVLSPERSLRDEYNMPENALLCGKVKG 543 (552)
T ss_pred cCCCCccceEEeCCCCeEEEEEEecCCeEEeeeccccccccccceEEEEEeCCccccCcCCCCCccccccccccC
Confidence 999999999999999999999999999999999999989999988777 355544 4558999999986654
|
|
| >TIGR03389 laccase laccase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-81 Score=648.87 Aligned_cols=422 Identities=32% Similarity=0.548 Sum_probs=310.2
Q ss_pred ccccc-ccceeEEEeccchhhhhcceeeEEEEeCCCCCCCCC-CCCcceEEEEeeeecccHHHHHhhhcCCCCCCCCCCC
Q 012467 2 LDVWQ-VQAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPF-HYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQ 79 (463)
Q Consensus 2 ~~~~~-~~~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~~~p~-~~d~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~d 79 (463)
|+|.+ .|+||||||||...|+ +||+|+|||+++++.+.|+ .+|+|++|+|+||+++...+++......+.. +.++|
T Consensus 90 Y~f~~~~~~GT~WYHsH~~~~~-~Gl~G~lIV~~~~~~~~~~~~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~~~-~~~~d 167 (539)
T TIGR03389 90 YNFTITGQRGTLWWHAHISWLR-ATVYGAIVILPKPGVPYPFPKPDREVPIILGEWWNADVEAVINQANQTGGA-PNVSD 167 (539)
T ss_pred EEEEecCCCeeEEEecCchhhh-ccceEEEEEcCCCCCCCCCCCCCceEEEEecccccCCHHHHHHHHHhcCCC-CCccc
Confidence 78888 4999999999998775 5999999999987644454 3589999999999999887766554443332 45789
Q ss_pred eEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccc
Q 012467 80 TLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQ 159 (463)
Q Consensus 80 ~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~ 159 (463)
++||||+.... ..|+ ....++|+|++||+|||||||+|+...+.|+|+||+|+|||+||.+++
T Consensus 168 ~~liNG~~~~~------------~~~~-----~~~~~~i~v~~G~~~RlRlINa~~~~~~~~~idgH~~~VIa~DG~~~~ 230 (539)
T TIGR03389 168 AYTINGHPGPL------------YNCS-----SKDTFKLTVEPGKTYLLRIINAALNDELFFAIANHTLTVVEVDATYTK 230 (539)
T ss_pred eEEECCCcCCC------------CCCC-----CCCceEEEECCCCEEEEEEEeccCCceEEEEECCCeEEEEEeCCcccC
Confidence 99999997530 1232 223458999999999999999999999999999999999999999999
Q ss_pred eeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCC---CCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccc
Q 012467 160 PFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP---ATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSK 236 (463)
Q Consensus 160 P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~---~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~ 236 (463)
|+.+++|.|++||||||+|++++ ++|+||||+.....+. ......|+|+|+++.....+. .+..+.+++.....
T Consensus 231 P~~~~~l~i~~GqRydVlv~a~~-~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~~~~~p~--~~~~~~~~~~~~~~ 307 (539)
T TIGR03389 231 PFKTKTIVIGPGQTTNVLLTADQ-SPGRYFMAARPYMDAPGAFDNTTTTAILQYKGTSNSAKPI--LPTLPAYNDTAAAT 307 (539)
T ss_pred ceEeCeEEecCCCEEEEEEECCC-CCceEEEEEeccccCccCCCCcceEEEEEECCCCCCCCCC--CCCCCCCCchhhhh
Confidence 99999999999999999999998 5689999998654432 245689999998754321111 11122222221111
Q ss_pred cccccccccC-C--CCCCCCccceEEEEEeeeec-----------cCCeEEEEEecccCCCCCCCCccccccCCCCCCC-
Q 012467 237 SFSNKIFALM-G--SPKPPTNFHRRLTLLNTQNT-----------INGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFD- 301 (463)
Q Consensus 237 ~~~~~~~~~~-~--~~~~p~~~d~~~~~~~~~~~-----------~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~- 301 (463)
.....+.... + ....|..+++++.+.+..+. ......|+|||++|..|..|.|.+.+.++.+.+.
T Consensus 308 ~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~in~~s~~~p~~p~l~~~~~~~~~~~~~ 387 (539)
T TIGR03389 308 NFSNKLRSLNSAQYPANVPVTIDRRLFFTIGLGLDPCPNNTCQGPNGTRFAASMNNISFVMPTTALLQAHYFGISGVFTT 387 (539)
T ss_pred HHHhhcccccccCCCCCCCCCCCeEEEEEeecccccCcccccccCCCcEEEEEECCcccCCCCcchhhhhhcccCCcccc
Confidence 1111122221 1 11233455666655543221 0124689999999999999988666554444221
Q ss_pred --CCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcc
Q 012467 302 --QNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKE 379 (463)
Q Consensus 302 --~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~ 379 (463)
+..+|..|+ ++....+.+...+.++.++.++.|++|||+|+|.+.+ ....||||||||+||||++|.|.|+..
T Consensus 388 ~~~~~~p~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~V~ivi~n~~~~---~~~~HP~HLHGh~F~Vlg~g~g~~~~~ 462 (539)
T TIGR03389 388 DFPANPPTKFN--YTGTNLPNNLFTTNGTKVVRLKFNSTVELVLQDTSIL---GSENHPIHLHGYNFFVVGTGFGNFDPK 462 (539)
T ss_pred CCccCCCcccc--CCCCCcccccccccCceEEEecCCCEEEEEEecCCcC---CCCCCcEeEcCCceEEEEeccCCCCcc
Confidence 233444442 1111111111123356789999999999999997532 123899999999999999999999764
Q ss_pred -ccccCCCCCCCccceEEeCCCcEEEEEEEcCCceeeeecccchHhHHccceeeeec-----cccccccCCCCCccc
Q 012467 380 -DEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLAL-----GVETVGNIPNQALAC 450 (463)
Q Consensus 380 -~~~~~n~~~p~~rDTv~v~~~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~-----~~~~~~~~P~~~~~C 450 (463)
+...+|+.||++|||+.|+++||++|||+|||||+|+|||||+||+..||+++|.+ +.++++++|+.++.|
T Consensus 463 ~~~~~~nl~nP~rRDTv~vp~~g~vvirf~adNPG~W~~HCHi~~H~~~Gm~~~~~~~~~~~~~~~~~~~p~~~~~c 539 (539)
T TIGR03389 463 KDPAKFNLVDPPERNTVGVPTGGWAAIRFVADNPGVWFMHCHLEVHTTWGLKMAFLVDNGKGPNQSLLPPPSDLPSC 539 (539)
T ss_pred cCccccccCCCCeeeeEEcCCCceEEEEEecCCCeEEEEEecccchhhhcceEEEEEccCCCCccccCCCCccCCCC
Confidence 34578999999999999999999999999999999999999999999999999965 446688999999999
|
Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
| >PLN02168 copper ion binding / pectinesterase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-81 Score=642.00 Aligned_cols=399 Identities=29% Similarity=0.514 Sum_probs=297.5
Q ss_pred cccccc-cceeEEEeccchhhhhcceeeEEEEeCCCCCCCCC-CCCcceEEEEeeeecccHHHHHhhhcCCCCCCCCCCC
Q 012467 2 LDVWQV-QAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPF-HYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQ 79 (463)
Q Consensus 2 ~~~~~~-~~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~~~p~-~~d~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~d 79 (463)
|+|.+. |+||||||||.+.|+.+||+|+|||+++++.+.|+ .+|+|++|+|+||++.+...+...+.. +.. .+++|
T Consensus 112 Y~F~~~~q~GT~WYHsH~~~Q~~~GL~G~lII~~~~~~~~p~~~~d~e~~l~l~Dw~~~~~~~~~~~~~~-g~~-~~~~d 189 (545)
T PLN02168 112 YRFQVKDQIGSYFYFPSLLLQKAAGGYGAIRIYNPELVPVPFPKPDEEYDILIGDWFYADHTVMRASLDN-GHS-LPNPD 189 (545)
T ss_pred EEEEeCCCCceEEEecChhhhhhCcceeEEEEcCCcccCcCcCcccceeeEEEEecCCCCHHHHHhhhhc-CCC-CCCCC
Confidence 788884 89999999999999999999999999987655554 468999999999999876554332322 222 35789
Q ss_pred eEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccc
Q 012467 80 TLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQ 159 (463)
Q Consensus 80 ~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~ 159 (463)
++||||++.. .++++|++||+|||||||+|+.+.+.|+|+||+|+|||+||.+++
T Consensus 190 ~~liNG~~~~-------------------------~~~~~v~~G~~yRlRiiNa~~~~~~~~~IdgH~~tVIa~DG~~v~ 244 (545)
T PLN02168 190 GILFNGRGPE-------------------------ETFFAFEPGKTYRLRISNVGLKTCLNFRIQDHDMLLVETEGTYVQ 244 (545)
T ss_pred EEEEeccCCC-------------------------cceEEeCCCCEEEEEEEeccCCceEEEEECCcEEEEEEECCeECC
Confidence 9999999853 137999999999999999999999999999999999999999999
Q ss_pred eeeEeeEEecCCceEEEEEecCCCCCC---ceEEEEEecCCCCCCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccc
Q 012467 160 PFEVDDMDIYSGESYSVLLTTNQDPSY---NYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSK 236 (463)
Q Consensus 160 P~~~~~l~i~~GeR~dvlV~~~~~~~g---~y~ir~~~~~~~~~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~ 236 (463)
|..++.|.|++||||||+|++++...| +||||+.....+ ....+.|+|+|+++.... ..+.|..|.+.+...+.
T Consensus 245 p~~~~~l~i~~GqRydvlv~a~~~~~g~~~~Y~i~a~~~~~~-~~~~~~ail~Y~~~~~~~--~~p~p~~p~~~~~~~~~ 321 (545)
T PLN02168 245 KRVYSSLDIHVGQSYSVLVTAKTDPVGIYRSYYIVATARFTD-AYLGGVALIRYPNSPLDP--VGPLPLAPALHDYFSSV 321 (545)
T ss_pred CceeeEEEEcCCceEEEEEEcCCCCCCCcceEEEEEEecccC-CCcceEEEEEECCCCCCC--CCCCCCCCccccccccc
Confidence 999999999999999999999864433 899999875433 346788999998654321 11233333333332222
Q ss_pred ccccc----ccccCCCCCCCC--------ccceEEEEEeeeeccCCeEEEEEecccCCCCCCCCccccccCCCCCCC---
Q 012467 237 SFSNK----IFALMGSPKPPT--------NFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFD--- 301 (463)
Q Consensus 237 ~~~~~----~~~~~~~~~~p~--------~~d~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~--- 301 (463)
..... +..... ...|. ..++++.+.......++...|+|||.+|..|++|.|.+.+++.++.+.
T Consensus 322 ~~~~~~~~~l~p~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~iN~~s~~~p~~P~l~~~~~~~~~~~~~~~ 400 (545)
T PLN02168 322 EQALSIRMDLNVGAA-RSNPQGSYHYGRINVTRTIILHNDVMLSSGKLRYTINGVSFVYPGTPLKLVDHFQLNDTIIPGM 400 (545)
T ss_pred chhhhhhhcCCCCCC-CCCCcccccccccccceeEEecccccccCceEEEEECCCccCCCCCchhhhhhcccccccccCC
Confidence 22111 111111 11111 123333333211112355789999999999999998766554332221
Q ss_pred -CCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccc
Q 012467 302 -QNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKED 380 (463)
Q Consensus 302 -~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~ 380 (463)
+..+| +.....++.++.++.|++|+|+|+|.... .||||||||+||||++|.|.|+..+
T Consensus 401 ~~~~p~--------------~~~~~~~~~v~~~~~~~~VeiViqn~~~~------~HP~HLHGh~F~Vvg~g~g~~~~~~ 460 (545)
T PLN02168 401 FPVYPS--------------NKTPTLGTSVVDIHYKDFYHIVFQNPLFS------LESYHIDGYNFFVVGYGFGAWSESK 460 (545)
T ss_pred CccCCC--------------cCccccCceEEEecCCCEEEEEEeCCCCC------CCCeeeCCCceEEEECCCCCCCccc
Confidence 11111 11112235678999999999999998655 8999999999999999999998665
Q ss_pred cccCCCCCCCccceEEeCCCcEEEEEEEcCCceeeeecccchHhHHccceeeeec-----------cccccccCCCCCcc
Q 012467 381 EKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLAL-----------GVETVGNIPNQALA 449 (463)
Q Consensus 381 ~~~~n~~~p~~rDTv~v~~~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~-----------~~~~~~~~P~~~~~ 449 (463)
+..+|+.||++|||+.|+++||++|||+|||||+|+|||||++|+..||.+.+.+ ..++++++|+.++.
T Consensus 461 ~~~~Nl~nP~rRDTv~vp~~Gw~vIRF~aDNPG~Wl~HCHi~~~~h~g~gl~~~v~~~~~e~p~~~~~~~~~~~P~~~~~ 540 (545)
T PLN02168 461 KAGYNLVDAVSRSTVQVYPYSWTAILIAMDNQGMWNVRSQKAEQWYLGQELYMRVKGEGEEDPSTIPVRDENPIPGNVIR 540 (545)
T ss_pred cccCCCCCCCccceEEeCCCCEEEEEEEccCCeEEeeeecCcccceecCcEEEEEEcccccCccccccccccCCChhhcc
Confidence 5679999999999999999999999999999999999999977777776666633 13456779999999
Q ss_pred cc
Q 012467 450 CG 451 (463)
Q Consensus 450 C~ 451 (463)
||
T Consensus 541 cg 542 (545)
T PLN02168 541 CG 542 (545)
T ss_pred cc
Confidence 97
|
|
| >TIGR03390 ascorbOXfungal L-ascorbate oxidase, fungal type | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-75 Score=607.39 Aligned_cols=407 Identities=31% Similarity=0.582 Sum_probs=294.0
Q ss_pred ccccc--ccceeEEEeccchhhhhcceeeEEEEeCCCCCCCCCCCCcceEEEEeeeecccHHHHHhhhcCCCCCCCCCCC
Q 012467 2 LDVWQ--VQAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQ 79 (463)
Q Consensus 2 ~~~~~--~~~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~d 79 (463)
|+|.+ .|+||||||||.+.|+. ||+|+|||+++++ .++.||+|++|+|+||+++...++...+......+..+++
T Consensus 96 Y~f~~~~~q~GT~WYHsH~~~Q~~-~l~G~lIV~~~~~--~~~~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~~d 172 (538)
T TIGR03390 96 YEIKPEPGDAGSYFYHSHVGFQAV-TAFGPLIVEDCEP--PPYKYDDERILLVSDFFSATDEEIEQGLLSTPFTWSGETE 172 (538)
T ss_pred EEEEecCCCCeeeEEecCCchhhh-cceeEEEEccCCc--cCCCccCcEEEEEeCCCCCCHHHHHhhhhccCCccCCCCc
Confidence 67775 48999999999999987 5999999998753 4678899999999999999888766555443333345789
Q ss_pred eEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCce-eEEEEeCCccc
Q 012467 80 TLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHK-MVVVEADGNYV 158 (463)
Q Consensus 80 ~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~-~~via~DG~~v 158 (463)
++||||++.+.|... .+ +....|..++++|++||+|||||||+|+.+.+.|+|++|+ |+|||+||+++
T Consensus 173 ~~liNG~~~~~~~~~---------~~--~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~idgH~~~~VIa~DG~~~ 241 (538)
T TIGR03390 173 AVLLNGKSGNKSFYA---------QI--NPSGSCMLPVIDVEPGKTYRLRFIGATALSLISLGIEDHENLTIIEADGSYT 241 (538)
T ss_pred eEEECCccccccccc---------cc--cCCCCCcceEEEECCCCEEEEEEEccCCceEEEEEECCCCeEEEEEeCCCCC
Confidence 999999987644210 01 1122345678999999999999999999999999999999 99999999999
Q ss_pred ceeeEeeEEecCCceEEEEEecCCCC------CCceEEEEEecCCCCCCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCC
Q 012467 159 QPFEVDDMDIYSGESYSVLLTTNQDP------SYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDY 232 (463)
Q Consensus 159 ~P~~~~~l~i~~GeR~dvlV~~~~~~------~g~y~ir~~~~~~~~~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~ 232 (463)
+|+.++.|.|++||||||+|++++.. +++||||+.....+ +.....|||+|+++.....+. .|..+.....
T Consensus 242 ~P~~v~~l~l~~GqRydVlv~~~~~~~~~~~~~~~Y~ir~~~~~~~-~~~~~~aiL~Y~~~~~~~~~~--~p~~~~~~~~ 318 (538)
T TIGR03390 242 KPAKIDHLQLGGGQRYSVLFKAKTEDELCGGDKRQYFIQFETRDRP-KVYRGYAVLRYRSDKASKLPS--VPETPPLPLP 318 (538)
T ss_pred CceEeCeEEEccCCEEEEEEECCCccccccCCCCcEEEEEeecCCC-CcceEEEEEEeCCCCCCCCCC--CCCCCCCCcc
Confidence 99999999999999999999999742 48999999765443 345678999998643322111 1111111100
Q ss_pred c-ccccccccccccCC----CCCCCCccceEEEEEeeeec--cCCeEEEEEecccCCC--CCCCCccccccCCCCCCCCC
Q 012467 233 D-HSKSFSNKIFALMG----SPKPPTNFHRRLTLLNTQNT--INGFTKWAINNVSLTL--PPTPYLGSIKYGLKDAFDQN 303 (463)
Q Consensus 233 ~-~~~~~~~~~~~~~~----~~~~p~~~d~~~~~~~~~~~--~~~~~~~~iNg~~~~~--p~~p~l~~~~~~~~~~~~~~ 303 (463)
. ........+..... ..+++..+++++.+.+.+.. .++...|+|||.+|.. |.+|+|.....+... .
T Consensus 319 ~~~~~~~~~~l~pl~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~g~~~~~~N~~s~~~~~~~~P~L~~~~~~~~~----~ 394 (538)
T TIGR03390 319 NSTYDWLEYELEPLSEENNQDFPTLDEVTRRVVIDAHQNVDPLNGRVAWLQNGLSWTESVRQTPYLVDIYENGLP----A 394 (538)
T ss_pred CcchhhhheeeEecCccccCCCCCCCcCceEEEEEccccccccCCeEEEEECCcccCCCCCCCchHHHHhcCCCC----c
Confidence 0 00000112222111 01223456788877776532 2456789999999986 788988766532110 0
Q ss_pred CCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCC--CCCCCCCCeeecCCceEEEeecCCCCCcc-c
Q 012467 304 GPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIR--PNLSEIHPWHLHGHDFWVLGRGEGKFTKE-D 380 (463)
Q Consensus 304 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~--~~~~~~HP~HlHG~~f~vl~~g~g~~~~~-~ 380 (463)
.++ | +. ... ......++.++.++.|++|||+|+|.+... ......||||||||+||||++|.|.|++. +
T Consensus 395 ~~~--~----~~-~~~-~~~~~~~~~~~~~~~~~~V~ivi~n~~~~~~~~~~~~~HP~HlHGh~F~vlg~G~G~~~~~~~ 466 (538)
T TIGR03390 395 TPN--Y----TA-ALA-NYGFDPETRAFPAKVGEVLEIVWQNTGSYTGPNGGVDTHPFHAHGRHFYDIGGGDGEYNATAN 466 (538)
T ss_pred CCC--c----cc-ccc-cCCcCcCceEEEcCCCCEEEEEEECCcccccCCCCCCCCCeeecCCcEEEEcccccccCCccC
Confidence 000 1 00 000 000112344688999999999999974210 00123899999999999999999999865 3
Q ss_pred cccCCCCCCCccceEEeC----------CCcEEEEEEEcCCceeeeecccchHhHHccceeeeeccc
Q 012467 381 EKKFNLKNPPLKNTAVIF----------PYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGV 437 (463)
Q Consensus 381 ~~~~n~~~p~~rDTv~v~----------~~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~ 437 (463)
+..+|+.||++|||+.|+ +++|++|||++||||+|+|||||+||+.+||+++|.+..
T Consensus 467 ~~~~nl~nP~rRDTv~vp~~~~~~~~~~~~~~~~ir~~~dNPG~W~~HCHi~~H~~~Gm~~~~~~~~ 533 (538)
T TIGR03390 467 EAKLENYTPVLRDTTMLYRYAVKVVPGAPAGWRAWRIRVTNPGVWMMHCHILQHMVMGMQTVWVFGD 533 (538)
T ss_pred hhhhccCCCCeecceeeccccccccccCCCceEEEEEEcCCCeeEEEeccchhhhhccceEEEEeCC
Confidence 456888999999999996 789999999999999999999999999999999997653
|
This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. |
| >KOG1263 consensus Multicopper oxidases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-75 Score=595.14 Aligned_cols=420 Identities=35% Similarity=0.586 Sum_probs=327.3
Q ss_pred cccccc-cceeEEEeccchhhhhcceeeEEEEeCCCCCCCCCC-CCcceEEEEeeeecc-cHHHHHhhhcCCCCCCCCCC
Q 012467 2 LDVWQV-QAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFH-YDGEFNLLLSDWWHR-SVHEQEVGLSSRPLRWIGEP 78 (463)
Q Consensus 2 ~~~~~~-~~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~~~p~~-~d~e~~l~l~D~~~~-~~~~~~~~~~~~~~~~~~~~ 78 (463)
|+|.+. |.||||||||++.|+++|++|+|||.++...+.|+. +|+|++|+|+||+++ ...++...+...+. .+..+
T Consensus 114 Y~F~v~~q~GT~~yh~h~~~~Ra~G~~G~liI~~~~~~p~pf~~pd~E~~ill~dW~~~~~~~~l~~~~~~~~~-~p~~~ 192 (563)
T KOG1263|consen 114 YRFTVKDQIGTLWYHSHVSWQRATGVFGALIINPRPGLPVPFPKPDKEFTILLGDWYKNLNHKNLKNFLDRTGA-LPNPS 192 (563)
T ss_pred EEEEeCCcceeEEEeeccccccccCceeEEEEcCCccCCCCCCCCCceeEEEeEeeccccCHHHHHHhhccCCC-CCCCC
Confidence 778888 999999999999999999999999999987666776 599999999999996 65555544444443 25559
Q ss_pred CeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCccc
Q 012467 79 QTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYV 158 (463)
Q Consensus 79 d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v 158 (463)
|..+|||+.++ + | .| .++++|++||+|||||||+|....+.|+|++|+|+||++||.++
T Consensus 193 D~~~iNg~~g~---~---~------~~---------~~~l~v~pGktY~lRiiN~g~~~~l~F~I~~H~ltvVe~Dg~y~ 251 (563)
T KOG1263|consen 193 DGVLINGRSGF---L---Y------NC---------TPTLTVEPGKTYRLRIINAGLNTSLNFSIANHQLTVVEVDGAYT 251 (563)
T ss_pred CceEECCCCCc---c---c------Cc---------eeEEEEcCCCEEEEEEEccccccceEEEECCeEEEEEEecceEE
Confidence 99999999865 1 1 22 35899999999999999999999999999999999999999999
Q ss_pred ceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCC---CCCCeEEEEEeCCCCCCCCCC-CCCCCCCCCCCCcc
Q 012467 159 QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP---ATPPALTLLNYHPTSASKIPL-SPPPITPRWDDYDH 234 (463)
Q Consensus 159 ~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~---~~~~~~a~l~y~~~~~~~~~~-~~~p~~p~~~~~~~ 234 (463)
+|..+++|.|+|||||||+|++++. +++|+|++.....+. ......|+|+|.+........ ...+..|...+...
T Consensus 252 ~p~~~~~l~i~~GQ~~~vLvtadq~-~~~Y~i~~~~~~~~~~~~~~~t~~~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~ 330 (563)
T KOG1263|consen 252 KPFTTDSLDIHPGQTYSVLLTADQS-PGDYYIAASPYFDASNVPFNLTTTGILRYSGSTHPASEKLPIYPFLPPGNDTAW 330 (563)
T ss_pred eeeeeceEEEcCCcEEEEEEeCCCC-CCcEEEEEEeeeccCCcceeeeEEEEEEEeCCcccCcccCcccccCCcccCchh
Confidence 9999999999999999999999994 569999998866542 156778999998622211111 11223344444444
Q ss_pred cccccccccccCC---CCCCCCccceEEEEEeee--------eccCCeEEEEEecccCCCCCCCCccccccCCCC-CCC-
Q 012467 235 SKSFSNKIFALMG---SPKPPTNFHRRLTLLNTQ--------NTINGFTKWAINNVSLTLPPTPYLGSIKYGLKD-AFD- 301 (463)
Q Consensus 235 ~~~~~~~~~~~~~---~~~~p~~~d~~~~~~~~~--------~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~-~~~- 301 (463)
+..+...++.... ..+.|++.++...+..+. ...++...++||+.+|..|++|.+.+.++...+ .+.
T Consensus 331 s~~~~~~~r~~~~~~~~~~~P~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~siN~isf~~P~tp~~l~~~~~~~~~~~~~ 410 (563)
T KOG1263|consen 331 STYQARSIRSLLSASFARPVPQGSYHYGLITIGLTLKLCNSDNKNNGKLRASINNISFVTPKTPSLLAAYFKNIPGYFTN 410 (563)
T ss_pred hhhhhhcccccccccCcccCCCccccccceeeeccEEeccCCCCCCcEEEEEEcceEEECCCCchhhhhhhccCCccccC
Confidence 5555555555432 234455555554433322 123567899999999999999888766644333 221
Q ss_pred --CCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcc
Q 012467 302 --QNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKE 379 (463)
Q Consensus 302 --~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~ 379 (463)
+..||..+ ++. .++.+++++.++.++.||++|+|.+.. ..+.||||||||.|+|++.|.|.|++.
T Consensus 411 d~p~~P~~~~--~~~--------~~~~~t~v~~~~~~~~veIVlqN~~~~---~~~~hp~HLHG~~F~Vvg~g~G~~~~~ 477 (563)
T KOG1263|consen 411 DFPDKPPIKF--DYT--------GPTLGTSVMKLEFNSFVEIVLQNTSTG---TQENHPNHLHGYNFYVVGYGFGNWDPA 477 (563)
T ss_pred ccCCCCcccc--CCc--------cccccceEEEeecCCEEEEEEeCCccc---cCCCCccceeceEEEEEEecccccCcC
Confidence 23333222 211 136788899999999999999998765 334799999999999999999999984
Q ss_pred -cc-ccCCCCCCCccceEEeCCCcEEEEEEEcCCceeeeecccchHhHHccceeeeecccccc-----ccCCCCCccccC
Q 012467 380 -DE-KKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETV-----GNIPNQALACGL 452 (463)
Q Consensus 380 -~~-~~~n~~~p~~rDTv~v~~~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~~~~-----~~~P~~~~~C~~ 452 (463)
++ ..+|+.+|+.||||.|+||||++|||.|||||+|+||||+++|+..||.++|.+..+.. .++|++.+.||.
T Consensus 478 ~d~~~~yNl~dp~~R~Tv~V~pggw~aIrf~adNPG~W~~HCHie~H~~~G~~~~f~V~~~~~~~~~~~~~P~~~~~cg~ 557 (563)
T KOG1263|consen 478 KDPRKKYNLVDPVSRDTVQVPPGGWTAIRFVADNPGVWLMHCHIEDHLYLGMETVFIVGNGEESLSSEYPPPKNLPKCGR 557 (563)
T ss_pred cChhhhcccCCCcccceEEeCCCCEEEEEEEcCCCcEEEEEEecHHHHhccCeEEEEEeCCCccCCcCCCCCCCcccccc
Confidence 34 78999999999999999999999999999999999999999999999999997765443 469999999998
Q ss_pred cccCC
Q 012467 453 TGKRF 457 (463)
Q Consensus 453 ~~~~~ 457 (463)
-+...
T Consensus 558 ~~~~~ 562 (563)
T KOG1263|consen 558 ASGIP 562 (563)
T ss_pred cCCcC
Confidence 77643
|
|
| >TIGR01480 copper_res_A copper-resistance protein, CopA family | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-62 Score=504.93 Aligned_cols=337 Identities=29% Similarity=0.434 Sum_probs=246.8
Q ss_pred cccccccceeEEEeccchhhhhcceeeEEEEeCCCCCCCCCCCCcceEEEEeeeecccHHHHHhhhcCCCCC--------
Q 012467 2 LDVWQVQAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLR-------- 73 (463)
Q Consensus 2 ~~~~~~~~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~~~~~~~~~~~~-------- 73 (463)
|+|.+.|+||||||||.+.|+.+||+|+|||+++++ .|+.||+|++|+|+||+++...+++..+......
T Consensus 130 Y~f~~~~~GTyWYHsH~~~q~~~GL~G~lIV~~~~~--~p~~~D~E~vl~L~Dw~~~~p~~i~~~l~~~~~~~~~~~~~~ 207 (587)
T TIGR01480 130 YRFPVRQSGTYWYHSHSGFQEQAGLYGPLIIDPAEP--DPVRADREHVVLLSDWTDLDPAALFRKLKVMAGHDNYYKRTV 207 (587)
T ss_pred EEEECCCCeeEEEecCchhHhhccceEEEEECCCcc--ccCCCCceEEEEeeecccCCHHHHHHhhhcccccccccccch
Confidence 788999999999999999999999999999998643 4778999999999999998877765443311000
Q ss_pred ---------------------CC-------------CCCCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEE
Q 012467 74 ---------------------WI-------------GEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILH 119 (463)
Q Consensus 74 ---------------------~~-------------~~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~ 119 (463)
|. +....+|+||+.. ..++++.
T Consensus 208 ~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~d~~dv~G~~~~~LiNG~~~------------------------~~~~~~~ 263 (587)
T TIGR01480 208 ADFFRDVRNDGLKQTLADRKMWGQMRMTPTDLADVNGSTYTYLMNGTTP------------------------AGNWTGL 263 (587)
T ss_pred hhhhhhhccccccccccccccccccccCCcccccccCccceEEEcCccC------------------------CCCceEE
Confidence 00 0011244555532 1234689
Q ss_pred ecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCC
Q 012467 120 VQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP 199 (463)
Q Consensus 120 v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~ 199 (463)
+++|++|||||||+|+.+.++|+|+||+|+|||+||++|+|+.++.|.|++||||||+|++++ .|.|+|++...++
T Consensus 264 v~~G~rvRLR~INas~~~~f~l~I~gh~m~VIa~DG~~v~Pv~vd~l~I~pGeRyDVlV~~~~--~g~~~i~a~~~~~-- 339 (587)
T TIGR01480 264 FRPGEKVRLRFINGSAMTYFDVRIPGLKLTVVAVDGQYVHPVSVDEFRIAPAETFDVIVEPTG--DDAFTIFAQDSDR-- 339 (587)
T ss_pred ECCCCEEEEEEEecCCCceEEEEECCCEEEEEEcCCcCcCceEeCeEEEcCcceeEEEEecCC--CceEEEEEEecCC--
Confidence 999999999999999999999999999999999999999999999999999999999999875 4789999976543
Q ss_pred CCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcc----------------------c--------cc---c--------
Q 012467 200 ATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDH----------------------S--------KS---F-------- 238 (463)
Q Consensus 200 ~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~----------------------~--------~~---~-------- 238 (463)
....+++|++.+......++...+......++.. . .. .
T Consensus 340 -~~~~~~~l~~~~~~~~~~p~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (587)
T TIGR01480 340 -TGYARGTLAVRLGLTAPVPALDPRPLLTMKDMGMGGMHHGMDHSKMSMGGMPGMDMSMRAQSNAPMDHSQMAMDASPKH 418 (587)
T ss_pred -CceEEEEEecCCCCCCCCCCCCCccccChhhcccccccccccccccccCcccccCccccccccccCccccccccccccC
Confidence 3467888988643211111111100000000000 0 00 0
Q ss_pred -------------------------------c------ccccccCCCCCCCCccceEEEEEeeeeccCCeEEEEEecccC
Q 012467 239 -------------------------------S------NKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSL 281 (463)
Q Consensus 239 -------------------------------~------~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~iNg~~~ 281 (463)
. ..|.+..+ ...+..+++++.+.+..+. ....|+|||..|
T Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~~~-~~~~~~p~r~~~~~L~g~m--~~~~wtiNG~~~ 495 (587)
T TIGR01480 419 PASEPLNPLVDMIVDMPMDRMDDPGIGLRDNGRRVLTYADLHSLFP-PPDGRAPGREIELHLTGNM--ERFAWSFDGEAF 495 (587)
T ss_pred cccccCCccccccccCcccccCCCCcccccCCcceeehhhcccccc-ccCcCCCCceEEEEEcCCC--ceeEEEECCccC
Confidence 0 00111110 1122346777776664331 346799999876
Q ss_pred CCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCCCCCCCCCCeee
Q 012467 282 TLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHL 361 (463)
Q Consensus 282 ~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~Hl 361 (463)
.. .+| +.++.|++|+|+|.|.+.+ .|||||
T Consensus 496 ~~--------------------~~p------------------------l~v~~Gervri~l~N~t~~------~HpmHl 525 (587)
T TIGR01480 496 GL--------------------KTP------------------------LRFNYGERLRVVLVNDTMM------AHPIHL 525 (587)
T ss_pred CC--------------------CCc------------------------eEecCCCEEEEEEECCCCC------CcceeE
Confidence 31 011 6799999999999999887 999999
Q ss_pred cCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcCCceeeeecccchHhHHccceeeeec
Q 012467 362 HGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 362 HG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
|||.|+++.. +|.+ ++++||+.|+||+++.++|+++|||.|+||||++.|++.||+..|.+
T Consensus 526 HG~~f~v~~~-~G~~------------~~~~dTv~V~Pg~t~~~~f~ad~pG~w~~HCH~l~H~~~GM~~~~~v 586 (587)
T TIGR01480 526 HGMWSELEDG-QGEF------------QVRKHTVDVPPGGKRSFRVTADALGRWAYHCHMLLHMEAGMFREVTV 586 (587)
T ss_pred cCceeeeecC-CCcc------------cccCCceeeCCCCEEEEEEECCCCeEEEEcCCCHHHHhCcCcEEEEe
Confidence 9999999865 3443 36899999999999999999999999999999999999999999865
|
This model represents the CopA copper resistance protein family. CopA is related to laccase (benzenediol:oxygen oxidoreductase) and L-ascorbate oxidase, both copper-containing enzymes. Most members have a typical TAT (twin-arginine translocation) signal sequence with an Arg-Arg pair. Twin-arginine translocation is observed for a large number of periplasmic proteins that cross the inner membrane with metal-containing cofactors already bound. The combination of copper-binding sites and TAT translocation motif suggests a mechansism of resistance by packaging and export. |
| >PRK10965 multicopper oxidase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-58 Score=470.51 Aligned_cols=329 Identities=22% Similarity=0.286 Sum_probs=221.9
Q ss_pred ccccccc-ceeEEEecc----chhhhhcceeeEEEEeCCCCCC--CCCCCC-cceEEEEeeeecccHHHHHhhhcCCCCC
Q 012467 2 LDVWQVQ-AGTYFYHGH----LGMQRSAGLYGSLIVDVADGEK--EPFHYD-GEFNLLLSDWWHRSVHEQEVGLSSRPLR 73 (463)
Q Consensus 2 ~~~~~~~-~GT~WYHsH----~~~q~~~Gl~G~lIV~~~~~~~--~p~~~d-~e~~l~l~D~~~~~~~~~~~~~~~~~~~ 73 (463)
|+|.+.| +|||||||| ++.|+++||+|+|||+++++.+ .|..|+ +|++|+|+||+++..+++..........
T Consensus 128 Y~f~~~q~aGT~WYH~H~~g~t~~Qv~~GL~G~lIV~d~~~~~~~lp~~~~~~d~~lvlqD~~~~~~g~~~~~~~~~~~~ 207 (523)
T PRK10965 128 VTFTVDQPAATCWFHPHQHGKTGRQVAMGLAGLVLIEDDESLKLGLPKQWGVDDIPVILQDKRFSADGQIDYQLDVMTAA 207 (523)
T ss_pred EEeccCCCCceEEEecCCCCCcHHHHhCcCeEEEEEcCccccccCCcccCCCceeeEEEEeeeeCCCCceeccccccccc
Confidence 6788875 899999999 5999999999999999987643 233453 6999999999998766543221110000
Q ss_pred CCCCCCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEE-eCceeEEEE
Q 012467 74 WIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAV-KNHKMVVVE 152 (463)
Q Consensus 74 ~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i-~~h~~~via 152 (463)
....+|.+||||+..+ .+.++ +++|||||||+|+.+.++|++ ++|+|+|||
T Consensus 208 ~g~~gd~~lVNG~~~p---------------------------~~~v~-~~~~RlRliNas~~r~~~l~~~dg~~~~vIa 259 (523)
T PRK10965 208 VGWFGDTLLTNGAIYP---------------------------QHAAP-RGWLRLRLLNGCNARSLNLATSDGRPLYVIA 259 (523)
T ss_pred cCccCCeEEECCcccc---------------------------eeecC-CCEEEEEEEeccCCceEEEEEcCCceEEEEE
Confidence 0236799999999764 46664 679999999999999999998 899999999
Q ss_pred eCCccc-ceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCC----CCCCeEEEEEeCCCCCCCCCCCCCCCCC
Q 012467 153 ADGNYV-QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP----ATPPALTLLNYHPTSASKIPLSPPPITP 227 (463)
Q Consensus 153 ~DG~~v-~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~----~~~~~~a~l~y~~~~~~~~~~~~~p~~p 227 (463)
.||+++ +|..++.|.|+|||||||+|++++ .++|++.+....... .....+.++++...... ...+.|..
T Consensus 260 ~DG~~l~~P~~v~~l~lapGeR~dvlv~~~~--~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~P~~- 334 (523)
T PRK10965 260 SDGGLLAEPVKVSELPILMGERFEVLVDTSD--GKAFDLVTLPVSQMGMALAPFDKPLPVLRIQPLLIS--ASGTLPDS- 334 (523)
T ss_pred eCCCcccCccEeCeEEECccceEEEEEEcCC--CceEEEEEecccCcccccccCCCceeEEEEeccCcC--CCCcCChh-
Confidence 999986 899999999999999999999986 478999876432211 01113445555422111 11111110
Q ss_pred CCCCCcccccccccccccCCCCCCCCccceEEEEEeeee-----------ccC---------------------------
Q 012467 228 RWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQN-----------TIN--------------------------- 269 (463)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~-----------~~~--------------------------- 269 (463)
+....+.+.......+++.+.+... ..+
T Consensus 335 --------------l~~~~~~~~~~~~~~r~~~l~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (523)
T PRK10965 335 --------------LASLPALPSLEGLTVRRLQLSMDPRLDMMGMQMLMEKYGDQAMAGMDMDHMMGHMGHGNMDHMNHG 400 (523)
T ss_pred --------------hccCCCCCcccccceeEEEEeeccccchhhhhhccccccccccccccccccccccccccccccccc
Confidence 0000000000001122332222100 000
Q ss_pred ----Ce-----EEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEE
Q 012467 270 ----GF-----TKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVD 340 (463)
Q Consensus 270 ----~~-----~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ 340 (463)
+. ..|+|||.+|.. .+ ..+.++.|++++
T Consensus 401 ~~~~~~~~~~~~~~~ING~~~~~-------------------~~------------------------~~~~~~~G~~e~ 437 (523)
T PRK10965 401 AADAGPAFDFHHANKINGKAFDM-------------------NK------------------------PMFAAKKGQYER 437 (523)
T ss_pred cccccccccccccccCCCeECCC-------------------CC------------------------cceecCCCCEEE
Confidence 00 013455554421 11 126799999999
Q ss_pred EEEEeCCC-CCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEE----cCCceee
Q 012467 341 VILQNANA-IRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFV----ADNPGAW 415 (463)
Q Consensus 341 ~vl~N~~~-~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~----adnpG~w 415 (463)
|+|.|.+. + .|||||||++|+||+++..... ...+.|||||.|++ +.+.|+++ ++++|.|
T Consensus 438 w~i~N~~~~~------~Hp~HlHg~~F~Vl~~~g~~~~--------~~~~~wkDTv~v~~-~~~~i~~~f~~~~~~~g~~ 502 (523)
T PRK10965 438 WVISGVGDMM------LHPFHIHGTQFRILSENGKPPA--------AHRAGWKDTVRVEG-GRSEVLVKFDHDAPKEHAY 502 (523)
T ss_pred EEEEeCCCCC------ccCeEEeCcEEEEEEecCCCCC--------ccccccccEEEECC-cEEEEEEEecCCCCCCCCE
Confidence 99999874 4 8999999999999999532211 12357999999987 55655544 3568899
Q ss_pred eecccchHhHHccceeeeec
Q 012467 416 AFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 416 ~~HCHi~~H~~~GM~~~~~~ 435 (463)
||||||++|+|.|||..|.+
T Consensus 503 ~~HCHiL~Hed~GMM~~~~V 522 (523)
T PRK10965 503 MAHCHLLEHEDTGMMLGFTV 522 (523)
T ss_pred EEEeCchhhhccCccceeEe
Confidence 99999999999999999865
|
|
| >PRK10883 FtsI repressor; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-57 Score=464.34 Aligned_cols=318 Identities=17% Similarity=0.172 Sum_probs=219.8
Q ss_pred cccccc-cceeEEEecc----chhhhhcceeeEEEEeCCCCCCCC--CCCC-cceEEEEeeeecccHHHHHhhhcCCCCC
Q 012467 2 LDVWQV-QAGTYFYHGH----LGMQRSAGLYGSLIVDVADGEKEP--FHYD-GEFNLLLSDWWHRSVHEQEVGLSSRPLR 73 (463)
Q Consensus 2 ~~~~~~-~~GT~WYHsH----~~~q~~~Gl~G~lIV~~~~~~~~p--~~~d-~e~~l~l~D~~~~~~~~~~~~~~~~~~~ 73 (463)
|+|... ++|||||||| ++.|+++||+|+|||+++.+.+.+ ..|+ .|++|+|+||+++...+.........
T Consensus 128 y~f~~~~~aGT~WYH~H~~~~t~~qv~~GL~G~lII~d~~~~~~~~p~~~~~~d~~l~l~D~~~~~~g~~~~~~~~~~-- 205 (471)
T PRK10883 128 PVLPIRQNAATCWYHANTPNRMAQHVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPEYNEPGSG-- 205 (471)
T ss_pred EEEecCCCceeeEEccCCCCchhhhHhcCCeEEEEEeCCcccccCCcccCCCcceeEEeeeeeeccCCCccccccccC--
Confidence 566555 5999999999 567999999999999998764333 3454 49999999999987554322111111
Q ss_pred CCCCCCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEE-eCceeEEEE
Q 012467 74 WIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAV-KNHKMVVVE 152 (463)
Q Consensus 74 ~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i-~~h~~~via 152 (463)
...+|.+||||+..+ .++|++ ++|||||||+|+.+.+.|+| ++|+|+|||
T Consensus 206 -g~~gd~~lvNG~~~p---------------------------~~~v~~-~~~RlRliNas~~~~~~l~l~d~~~~~vIa 256 (471)
T PRK10883 206 -GFVGDTLLVNGVQSP---------------------------YVEVSR-GWVRLRLLNASNARRYQLQMSDGRPLHVIA 256 (471)
T ss_pred -CccCCeeEECCccCC---------------------------eEEecC-CEEEEEEEEccCCceEEEEEcCCCeEEEEE
Confidence 246899999999764 688987 58999999999999999999 899999999
Q ss_pred eCCccc-ceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCC----C--CC----CeEEEEEeCCCCCCCCCCC
Q 012467 153 ADGNYV-QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP----A--TP----PALTLLNYHPTSASKIPLS 221 (463)
Q Consensus 153 ~DG~~v-~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~----~--~~----~~~a~l~y~~~~~~~~~~~ 221 (463)
+||+++ +|..++.|.|+|||||||+|++++ ++.+.+.+....... . .. ....+++............
T Consensus 257 ~DGg~~~~P~~~~~l~l~pGeR~dvlVd~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (471)
T PRK10883 257 GDQGFLPAPVSVKQLSLAPGERREILVDMSN--GDEVSITAGEAAGIVDRLRGFFEPSSILVSTLVLTLRPTGLLPLVTD 334 (471)
T ss_pred eCCCcccCCcEeCeEEECCCCeEEEEEECCC--CceEEEECCCccccccccccccCCccccccceeEEEEccccccCCCC
Confidence 997765 899999999999999999999976 346666652111000 0 00 0111222221000000000
Q ss_pred CCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeeeeccCCeEEEEEecccCCCCCCCCccccccCCCCCCC
Q 012467 222 PPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFD 301 (463)
Q Consensus 222 ~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~ 301 (463)
..| ..+... +..+....+++.+.+.. ..|.|||.+|...
T Consensus 335 ---~~p------------~~l~~~---~~~~~~~~~~~~~~l~~------~~~~INg~~~~~~----------------- 373 (471)
T PRK10883 335 ---NLP------------MRLLPD---EIMEGSPIRSREISLGD------DLPGINGALWDMN----------------- 373 (471)
T ss_pred ---cCC------------hhhcCC---CCCCCCCcceEEEEecC------CcCccCCcccCCC-----------------
Confidence 000 011110 11112223444444321 1367999887421
Q ss_pred CCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcccc
Q 012467 302 QNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDE 381 (463)
Q Consensus 302 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~ 381 (463)
+. .+.++.|++++|.|.|. + .|||||||+.|||++++.....
T Consensus 374 --~~------------------------~~~~~~g~~e~W~~~n~--~------~HP~HlHg~~FqVl~~~G~~~~---- 415 (471)
T PRK10883 374 --RI------------------------DVTAQQGTWERWTVRAD--M------PQAFHIEGVMFLIRNVNGAMPF---- 415 (471)
T ss_pred --cc------------------------eeecCCCCEEEEEEECC--C------CcCEeECCccEEEEEecCCCCC----
Confidence 00 15789999999999885 4 7999999999999999533211
Q ss_pred ccCCCCCCCccceEEeCCCcEEEEEEEcCCce----eeeecccchHhHHccceeeeeccc
Q 012467 382 KKFNLKNPPLKNTAVIFPYGWTALRFVADNPG----AWAFHCHIEPHFHIGMGVVLALGV 437 (463)
Q Consensus 382 ~~~n~~~p~~rDTv~v~~~g~~~irf~adnpG----~w~~HCHi~~H~~~GM~~~~~~~~ 437 (463)
.....|||||.|+ +.+.|+++++++| .|||||||++|+|.|||..|.+.+
T Consensus 416 ----~~~~gwkDTV~v~--~~v~i~~~f~~~~~~~~~~m~HCHiLeHeD~GMM~~~~V~~ 469 (471)
T PRK10883 416 ----PEDRGWKDTVWVD--GQVELLVYFGQPSWAHFPFLFYSQTLEMADRGSIGQLLVNP 469 (471)
T ss_pred ----ccccCcCcEEEcC--CeEEEEEEecCCCCCCCcEEeecccccccccCCccCeEEec
Confidence 1123799999996 4699999999887 899999999999999999998743
|
|
| >COG2132 SufI Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-47 Score=392.15 Aligned_cols=331 Identities=28% Similarity=0.366 Sum_probs=226.3
Q ss_pred cccccccceeEEEeccchhhhhcceeeEEEEeCCCCCCCCCCCCcceEEEEeeeecccHHHHHhhhcCCCCCCCCCCCeE
Q 012467 2 LDVWQVQAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTL 81 (463)
Q Consensus 2 ~~~~~~~~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~d~~ 81 (463)
|.|.+.++||||||+|...|+++||+|++||++..+ .+..+|.+.++++.+|................ ....+..
T Consensus 118 y~f~~~~~gT~wyh~H~~~Q~~~Gl~G~~II~~~~~--~~~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~---~~~g~~~ 192 (451)
T COG2132 118 YTFTQDVPGTYWYHPHTHGQVYDGLAGALIIEDENS--EPLGVDDEPVILQDDWLDEDGTDLYQEGPAMG---GFPGDTL 192 (451)
T ss_pred EeecCCCCcceEeccCCCchhhcccceeEEEeCCCC--CCCCCCceEEEEEeeeecCCCCccccCCcccc---CCCCCeE
Confidence 678888899999999998899999999999999855 46688999999999999877654433211111 3478899
Q ss_pred EECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCccccee
Q 012467 82 LINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPF 161 (463)
Q Consensus 82 liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~ 161 (463)
+|||+..+ .+.+ ++++|||||+|+++.+++.+++.+++|+||++||.++.|.
T Consensus 193 ~vnG~~~p---------------------------~~~~-~~g~~rlRl~n~~~~~~~~~~~~~~~~~Vi~~DG~~v~~~ 244 (451)
T COG2132 193 LVNGAILP---------------------------FKAV-PGGVVRLRLLNAGNARTYHLALGGGPLTVIAVDGGPLPPV 244 (451)
T ss_pred EECCCccc---------------------------eeec-CCCeEEEEEEecCCceEEEEEecCceEEEEEeCCcCcCce
Confidence 99996543 3444 5567999999999999999999999999999999999999
Q ss_pred eEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCCCCCCeEEEEEeCCCC-CCCCCCCCCCCCCCCCCCcccccccc
Q 012467 162 EVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTS-ASKIPLSPPPITPRWDDYDHSKSFSN 240 (463)
Q Consensus 162 ~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~~~~~~~a~l~y~~~~-~~~~~~~~~p~~p~~~~~~~~~~~~~ 240 (463)
.++.+.|+|||||||+|+++. .+.+.+.+.. .... ....+........ ............+........ ...
T Consensus 245 ~~d~~~l~p~er~~v~v~~~~--~~~~~l~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~ 317 (451)
T COG2132 245 SVDELYLAPGERYEVLVDMND--GGAVTLTALG-EDMP--DTLKGFRAPNPILTPSYPVLNGRVGAPTGDMADHA--PVG 317 (451)
T ss_pred eeeeEEecCcceEEEEEEcCC--CCeEEEEecc-ccCC--ceeeeeeccccccccccccccccccCCCcchhhcc--ccc
Confidence 999999999999999999986 4677777654 1111 1111111111000 000000000000000000000 000
Q ss_pred cccccCCCCCCCCccceEEEEEeeeeccCCeEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCC
Q 012467 241 KIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPV 320 (463)
Q Consensus 241 ~~~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 320 (463)
.+.... ..+....+....+... .+...|.+|+..|.. .+
T Consensus 318 ~~~~~~--~~~~~~~~~~~~l~~~----~~~~~~~~n~~~~~~-------------------~~---------------- 356 (451)
T COG2132 318 LLVTIL--VEPGPNRDTDFHLIGG----IGGYVWAINGKAFDD-------------------NR---------------- 356 (451)
T ss_pred cchhhc--CCCcccccccchhhcc----cccccccccCccCCC-------------------Cc----------------
Confidence 000000 0000001111111110 112346777665531 00
Q ss_pred CCCccccceEEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCC
Q 012467 321 NANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPY 400 (463)
Q Consensus 321 ~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~ 400 (463)
..+.++.|++++|+|.|.+.+ .|||||||+.|+|++.+... ....+.||||+.+.++
T Consensus 357 --------~~~~~~~G~~~~~~i~n~~~~------~HP~HlHg~~F~v~~~~~~~---------~~~~~~~kDTv~v~~~ 413 (451)
T COG2132 357 --------VTLIAKAGTRERWVLTNDTPM------PHPFHLHGHFFQVLSGDAPA---------PGAAPGWKDTVLVAPG 413 (451)
T ss_pred --------CceeecCCCEEEEEEECCCCC------ccCeEEcCceEEEEecCCCc---------ccccCccceEEEeCCC
Confidence 127889999999999999887 99999999999999986111 1234689999999999
Q ss_pred cEEEEEEEcCCceeeeecccchHhHHccceeeeecc
Q 012467 401 GWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALG 436 (463)
Q Consensus 401 g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~ 436 (463)
+.++|+|.+++||.|+||||+++|++.|||..+.+.
T Consensus 414 ~~~~v~~~a~~~g~~~~HCH~l~H~~~Gm~~~~~v~ 449 (451)
T COG2132 414 ERLLVRFDADYPGPWMFHCHILEHEDNGMMGQFGVV 449 (451)
T ss_pred eEEEEEEeCCCCCceEEeccchhHhhcCCeeEEEec
Confidence 999999999999999999999999999999988654
|
|
| >PF00394 Cu-oxidase: Multicopper oxidase; InterPro: IPR001117 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.7e-32 Score=238.51 Aligned_cols=152 Identities=35% Similarity=0.674 Sum_probs=126.4
Q ss_pred cceEEEEeeeecccHHHHHhhhcCCC---CCCCCCCCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecC
Q 012467 46 GEFNLLLSDWWHRSVHEQEVGLSSRP---LRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQP 122 (463)
Q Consensus 46 ~e~~l~l~D~~~~~~~~~~~~~~~~~---~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~ 122 (463)
+|++|+|+||+|+...++...+...+ ..+++++|++||||+++++|... .......+.+.+++
T Consensus 1 ~e~~i~l~DW~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~~~~~--------------~~~~~~~~~~~v~~ 66 (159)
T PF00394_consen 1 EEYVIMLSDWYHDDSDDLLQQYFAPGKGPMGMPPIPDSILINGKGRFDCSSA--------------DYTGGEPPVIKVKP 66 (159)
T ss_dssp GGGEEEEEEETSSCTTTHBH-HSSCHHHSHSCTSSCSEEEETTBTCBTTCTT--------------GSTTSTSGEEEEET
T ss_pred CeEEEEEeECCCCCHHHhhhhhccccccccCCCcCCcEEEECCccccccccc--------------cccccccceEEEcC
Confidence 48999999999999888776555442 22467999999999999977641 11245567999999
Q ss_pred CCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCC---C
Q 012467 123 NKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRK---P 199 (463)
Q Consensus 123 g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~---~ 199 (463)
|++|||||||+|+.+.+.|+|+||+|+|||+||++++|..+++|.|++||||||+|++++ ++|+|||++.....+ .
T Consensus 67 g~~~rlRliNa~~~~~~~~~i~gh~~~Via~DG~~v~p~~~~~l~l~~G~R~dvlv~~~~-~~g~y~i~~~~~~~~~~~~ 145 (159)
T PF00394_consen 67 GERYRLRLINAGASTSFNFSIDGHPMTVIAADGVPVEPYKVDTLVLAPGQRYDVLVTADQ-PPGNYWIRASYQHDSINDP 145 (159)
T ss_dssp TTEEEEEEEEESSS-BEEEEETTBCEEEEEETTEEEEEEEESBEEE-TTEEEEEEEEECS-CSSEEEEEEEESSSSSHSH
T ss_pred CcEEEEEEEeccCCeeEEEEeeccceeEeeeccccccccccceEEeeCCeEEEEEEEeCC-CCCeEEEEEecccCCCccC
Confidence 999999999999999999999999999999999999999999999999999999999998 689999999743232 2
Q ss_pred CCCCeEEEEEeCC
Q 012467 200 ATPPALTLLNYHP 212 (463)
Q Consensus 200 ~~~~~~a~l~y~~ 212 (463)
.....+|+|+|++
T Consensus 146 ~~~~~~aiL~Y~~ 158 (159)
T PF00394_consen 146 QNGNALAILRYDG 158 (159)
T ss_dssp GGGTTEEEEEETT
T ss_pred CCcEEEEEEEECC
Confidence 4577899999985
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 1 (blue) domains. These domains are also present in proteins that have lost the ability to bind copper.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1RZP_A 2AVF_D 1NIA_A 1KCB_A 2NRD_A 1NIB_A 2BW4_A 1RZQ_C 2BWD_A 2BWI_A .... |
| >TIGR02376 Cu_nitrite_red nitrite reductase, copper-containing | Back alignment and domain information |
|---|
Probab=99.98 E-value=4e-32 Score=263.97 Aligned_cols=182 Identities=16% Similarity=0.152 Sum_probs=144.3
Q ss_pred cccccccceeEEEecc----chhhhhcceeeEEEEeCCCCCCCCCCCCcceEEEEeeeecccHHHHHhhhcCC-C-CCCC
Q 012467 2 LDVWQVQAGTYFYHGH----LGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSR-P-LRWI 75 (463)
Q Consensus 2 ~~~~~~~~GT~WYHsH----~~~q~~~Gl~G~lIV~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~~~~~~~~~-~-~~~~ 75 (463)
|+|.+.++|||||||| ++.|+..||+|+|||++++. .+ .+|+|++|+++||+++........+... . .. .
T Consensus 110 y~F~~~~~Gty~YH~H~~~~~~~q~~~Gl~G~liV~~~~~--~~-~~d~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~-~ 185 (311)
T TIGR02376 110 LRFKATRPGAFVYHCAPPGMVPWHVVSGMNGAIMVLPREG--LP-EYDKEYYIGESDLYTPKDEGEGGAYEDDVAAMR-T 185 (311)
T ss_pred EEEEcCCCEEEEEEcCCCCchhHHhhcCcceEEEeeccCC--Cc-CcceeEEEeeeeEeccccccccccccchHHHHh-c
Confidence 7888999999999999 57899999999999998754 23 6799999999999997643321111100 0 01 2
Q ss_pred CCCCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCC
Q 012467 76 GEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADG 155 (463)
Q Consensus 76 ~~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG 155 (463)
.+++.++|||+....+ +.+.+++|+++||||||+|..+.+.|+++++.+++|+.||
T Consensus 186 ~~~~~~~iNG~~~~~~------------------------~~~~v~~G~~~RlRiiNa~~~~~~~~~~~g~~~~~v~~DG 241 (311)
T TIGR02376 186 LTPTHVVFNGAVGALT------------------------GDNALTAGVGERVLFVHSQPNRDSRPHLIGGHGDYVWVTG 241 (311)
T ss_pred CCCCEEEECCccCCCC------------------------CCcccccCCcEEEEEEcCCCCCCCCCeEecCCceEEEECC
Confidence 4679999999965310 1468999999999999999999999999999999999999
Q ss_pred cccceee--EeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCCCCCCeEEEEEeCCCC
Q 012467 156 NYVQPFE--VDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTS 214 (463)
Q Consensus 156 ~~v~P~~--~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~~~~~~~a~l~y~~~~ 214 (463)
.++.|.. ++++.|+||||+||+|++++ +|.|++++...... ......|+|+|++..
T Consensus 242 ~~~~~~~~~~~~~~i~PG~R~dv~v~~~~--pG~y~~~~~~~~~~-~~~g~~~~i~~~g~~ 299 (311)
T TIGR02376 242 KFANPPNRDVETWFIPGGSAAAALYTFEQ--PGVYAYVDHNLIEA-FEKGAAAQVKVEGAW 299 (311)
T ss_pred cccCCCCCCcceEEECCCceEEEEEEeCC--CeEEEEECcHHHHH-HhCCCEEEEEECCCC
Confidence 9998754 89999999999999999997 58999998654332 133578999998643
|
This family consists of copper-type nitrite reductase. It reduces nitrite to nitric oxide, the first step in denitrification. |
| >PF07731 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR011706 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-30 Score=224.38 Aligned_cols=107 Identities=42% Similarity=0.826 Sum_probs=96.6
Q ss_pred ccceEEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEE
Q 012467 326 LGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTAL 405 (463)
Q Consensus 326 ~~~~~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~i 405 (463)
.+..++.++.|++|+|+|+|.+.. .|||||||++|+|++++.+.++......+++.+|.||||+.|+++++++|
T Consensus 31 ~~~~~~~~~~g~~v~~~l~N~~~~------~Hp~HlHG~~F~vl~~~~~~~~~~~~~~~~~~~~~~~DTv~v~~~~~~~i 104 (138)
T PF07731_consen 31 GNTPVIEVKNGDVVEIVLQNNGSM------PHPFHLHGHSFQVLGRGGGPWNPDDTQSYNPENPGWRDTVLVPPGGWVVI 104 (138)
T ss_dssp STTSEEEEETTSEEEEEEEECTTS------SEEEEETTSEEEEEEETTEESTTHCGGCCCSSSSSEESEEEEETTEEEEE
T ss_pred CCcceEEEeCCCEEEEEEECCCCC------ccceEEEeeEEEeeecCCcccccccccccccccCcccccccccceeEEEE
Confidence 445679999999999999998877 99999999999999998877655556678889999999999999999999
Q ss_pred EEEcCCceeeeecccchHhHHccceeeeecccc
Q 012467 406 RFVADNPGAWAFHCHIEPHFHIGMGVVLALGVE 438 (463)
Q Consensus 406 rf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~~ 438 (463)
||+++|||.|+||||+++|++.|||++|.+.++
T Consensus 105 ~~~~~~~G~w~~HCHi~~H~~~GM~~~~~v~~~ 137 (138)
T PF07731_consen 105 RFRADNPGPWLFHCHILEHEDNGMMAVFVVGPQ 137 (138)
T ss_dssp EEEETSTEEEEEEESSHHHHHTT-EEEEEECHH
T ss_pred EEEeecceEEEEEEchHHHHhCCCeEEEEEcCC
Confidence 999999999999999999999999999998764
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 2 domains.; GO: 0005507 copper ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3GDC_C 3ZX1_A 2YAH_A 2YAR_A 2YAQ_A 2YAO_A 2YAM_A 2YAF_A 2YAP_A 2XU9_A .... |
| >TIGR02376 Cu_nitrite_red nitrite reductase, copper-containing | Back alignment and domain information |
|---|
Probab=99.63 E-value=7.8e-14 Score=135.99 Aligned_cols=213 Identities=15% Similarity=0.111 Sum_probs=140.5
Q ss_pred eEEEecCCCeEEEEEEecCcc-eEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEe
Q 012467 116 QILHVQPNKTYRLRIASTTAL-ASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 194 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~-~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~ 194 (463)
++|++++|+++++++.|.... ..+.++++++. +.||+.. ...|.|||++.+-+++++ +|.||.....
T Consensus 59 P~irv~~Gd~v~v~v~N~~~~~~~h~~h~H~~~----~~dg~~~------~~~I~PG~t~ty~F~~~~--~Gty~YH~H~ 126 (311)
T TIGR02376 59 PLIRVHEGDYVELTLINPPTNTMPHNVDFHAAT----GALGGAA------LTQVNPGETATLRFKATR--PGAFVYHCAP 126 (311)
T ss_pred ceEEEECCCEEEEEEEeCCCCCCceeeeecCCC----ccCCCCc------ceeECCCCeEEEEEEcCC--CEEEEEEcCC
Confidence 489999999999999998632 45677777753 4677542 123899999999999875 7999998764
Q ss_pred cCC-CCC-CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeeeecc----
Q 012467 195 RGR-KPA-TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTI---- 268 (463)
Q Consensus 195 ~~~-~~~-~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~---- 268 (463)
... ..+ .....+.|.+++... . | ..|+++.+.+.....
T Consensus 127 ~~~~~~q~~~Gl~G~liV~~~~~-------~---~--------------------------~~d~e~~l~l~d~~~~~~~ 170 (311)
T TIGR02376 127 PGMVPWHVVSGMNGAIMVLPREG-------L---P--------------------------EYDKEYYIGESDLYTPKDE 170 (311)
T ss_pred CCchhHHhhcCcceEEEeeccCC-------C---c--------------------------CcceeEEEeeeeEeccccc
Confidence 321 111 223345555542110 0 0 012222211110000
Q ss_pred ---------------CCeEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEc
Q 012467 269 ---------------NGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYML 333 (463)
Q Consensus 269 ---------------~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (463)
.......|||+.... . ..+.+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~---------------------~-----------------------~~~~v 206 (311)
T TIGR02376 171 GEGGAYEDDVAAMRTLTPTHVVFNGAVGAL---------------------T-----------------------GDNAL 206 (311)
T ss_pred cccccccchHHHHhcCCCCEEEECCccCCC---------------------C-----------------------CCccc
Confidence 000123444442210 0 01467
Q ss_pred cCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCC-ccceEEeCCCcEEEEEEEcCCc
Q 012467 334 GLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPP-LKNTAVIFPYGWTALRFVADNP 412 (463)
Q Consensus 334 ~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~-~rDTv~v~~~g~~~irf~adnp 412 (463)
+.|++++|.|.|.+... .+.||++|++|.++.. +|.+. ..+. ..|++.|.||+...|.+++++|
T Consensus 207 ~~G~~~RlRiiNa~~~~-----~~~~~~~g~~~~~v~~-DG~~~---------~~~~~~~~~~~i~PG~R~dv~v~~~~p 271 (311)
T TIGR02376 207 TAGVGERVLFVHSQPNR-----DSRPHLIGGHGDYVWV-TGKFA---------NPPNRDVETWFIPGGSAAAALYTFEQP 271 (311)
T ss_pred ccCCcEEEEEEcCCCCC-----CCCCeEecCCceEEEE-CCccc---------CCCCCCcceEEECCCceEEEEEEeCCC
Confidence 89999999999987531 7999999999999998 55542 1122 3699999999999999999999
Q ss_pred eeeeecccchHhH-Hccceeeeec
Q 012467 413 GAWAFHCHIEPHF-HIGMGVVLAL 435 (463)
Q Consensus 413 G~w~~HCHi~~H~-~~GM~~~~~~ 435 (463)
|.|++|||...|. ..||++++..
T Consensus 272 G~y~~~~~~~~~~~~~g~~~~i~~ 295 (311)
T TIGR02376 272 GVYAYVDHNLIEAFEKGAAAQVKV 295 (311)
T ss_pred eEEEEECcHHHHHHhCCCEEEEEE
Confidence 9999999999998 6699988853
|
This family consists of copper-type nitrite reductase. It reduces nitrite to nitric oxide, the first step in denitrification. |
| >PLN02604 oxidoreductase | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.6e-09 Score=114.36 Aligned_cols=85 Identities=24% Similarity=0.296 Sum_probs=68.4
Q ss_pred EEccCCCEEEEEEEeCC-CCCCCCCCCCCeeecCCceEEEee--cCCCCCccccccCCCCCCCccceEEeCCCcEEEEEE
Q 012467 331 YMLGLNTTVDVILQNAN-AIRPNLSEIHPWHLHGHDFWVLGR--GEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRF 407 (463)
Q Consensus 331 ~~~~~g~~v~~vl~N~~-~~~~~~~~~HP~HlHG~~f~vl~~--g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf 407 (463)
++++.|+.+++.+.|.. .. .|+||+||... .+. -+|. +.-....|+||+..+++|
T Consensus 57 i~~~~Gd~v~v~v~N~l~~~------~~~iH~HG~~~--~~~~~~DG~--------------~~~tq~~i~pg~s~~y~f 114 (566)
T PLN02604 57 ILAQQGDTVIVELKNSLLTE------NVAIHWHGIRQ--IGTPWFDGT--------------EGVTQCPILPGETFTYEF 114 (566)
T ss_pred EEEECCCEEEEEEEeCCCCC------CCCEEeCCCCC--CCCccccCC--------------CccccCccCCCCeEEEEE
Confidence 88999999999999985 34 79999999942 111 0111 122445889999999999
Q ss_pred EcCCceeeeecccchHhHHccceeeeeccc
Q 012467 408 VADNPGAWAFHCHIEPHFHIGMGVVLALGV 437 (463)
Q Consensus 408 ~adnpG~w~~HCHi~~H~~~GM~~~~~~~~ 437 (463)
+++++|.|.||||...|...||++.|.+.+
T Consensus 115 ~~~~~Gt~wyH~H~~~q~~~Gl~G~liV~~ 144 (566)
T PLN02604 115 VVDRPGTYLYHAHYGMQREAGLYGSIRVSL 144 (566)
T ss_pred EcCCCEEEEEeeCcHHHHhCCCeEEEEEEe
Confidence 999999999999999999999999986553
|
|
| >TIGR03389 laccase laccase, plant | Back alignment and domain information |
|---|
Probab=98.99 E-value=5.3e-08 Score=102.52 Aligned_cols=209 Identities=18% Similarity=0.199 Sum_probs=130.9
Q ss_pred eEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEE---eCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEE
Q 012467 116 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVE---ADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA 192 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via---~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~ 192 (463)
|+|.++.|.++++++.|--.. ..+|+-|-+.+.. .||.+ .+..-.|.||+.+...+++.+ ..|+||-..
T Consensus 34 P~i~~~~GD~v~v~v~N~l~~---~tsiHwHGl~q~~~~~~DGv~----~vTq~pI~PG~s~~Y~f~~~~-~~GT~WYHs 105 (539)
T TIGR03389 34 PTLYAREGDTVIVNVTNNVQY---NVTIHWHGVRQLRNGWADGPA----YITQCPIQPGQSYVYNFTITG-QRGTLWWHA 105 (539)
T ss_pred CEEEEEcCCEEEEEEEeCCCC---CeeEecCCCCCCCCCCCCCCc----ccccCCcCCCCeEEEEEEecC-CCeeEEEec
Confidence 589999999999999998653 3355555555443 68876 233446899999999999863 479999987
Q ss_pred EecCCCCCCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeeeec-----
Q 012467 193 GVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNT----- 267 (463)
Q Consensus 193 ~~~~~~~~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~----- 267 (463)
..... ....++-|..++.... +.| .+. .|+++.+.++...
T Consensus 106 H~~~~---~~Gl~G~lIV~~~~~~-----~~~-~~~--------------------------~d~e~~l~l~Dw~~~~~~ 150 (539)
T TIGR03389 106 HISWL---RATVYGAIVILPKPGV-----PYP-FPK--------------------------PDREVPIILGEWWNADVE 150 (539)
T ss_pred Cchhh---hccceEEEEEcCCCCC-----CCC-CCC--------------------------CCceEEEEecccccCCHH
Confidence 65322 1234455544421110 000 000 0111111110000
Q ss_pred ------------cCCeEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccC
Q 012467 268 ------------INGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGL 335 (463)
Q Consensus 268 ------------~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (463)
..-.....|||+...... . ......++.++.
T Consensus 151 ~~~~~~~~~~~~~~~~d~~liNG~~~~~~~-----------------~--------------------~~~~~~~i~v~~ 193 (539)
T TIGR03389 151 AVINQANQTGGAPNVSDAYTINGHPGPLYN-----------------C--------------------SSKDTFKLTVEP 193 (539)
T ss_pred HHHHHHHhcCCCCCccceEEECCCcCCCCC-----------------C--------------------CCCCceEEEECC
Confidence 000012455655321000 0 000112588999
Q ss_pred CCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcCC-cee
Q 012467 336 NTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADN-PGA 414 (463)
Q Consensus 336 g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adn-pG~ 414 (463)
|++++|.|+|.+.. ..+.|||+||+|.||+. +|.+ ..|...|++.|.+|+...|.+++++ +|.
T Consensus 194 G~~~RlRlINa~~~-----~~~~~~idgH~~~VIa~-DG~~----------~~P~~~~~l~i~~GqRydVlv~a~~~~g~ 257 (539)
T TIGR03389 194 GKTYLLRIINAALN-----DELFFAIANHTLTVVEV-DATY----------TKPFKTKTIVIGPGQTTNVLLTADQSPGR 257 (539)
T ss_pred CCEEEEEEEeccCC-----ceEEEEECCCeEEEEEe-CCcc----------cCceEeCeEEecCCCEEEEEEECCCCCce
Confidence 99999999998755 16899999999999998 4543 3467789999999999999999986 898
Q ss_pred eeeccc
Q 012467 415 WAFHCH 420 (463)
Q Consensus 415 w~~HCH 420 (463)
|.++-+
T Consensus 258 y~i~~~ 263 (539)
T TIGR03389 258 YFMAAR 263 (539)
T ss_pred EEEEEe
Confidence 887654
|
Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
| >PLN02835 oxidoreductase | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.1e-07 Score=99.51 Aligned_cols=73 Identities=12% Similarity=0.123 Sum_probs=61.0
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.+.++.|++++|.|+|.+... ..-||+.||+|.|++. +|.+. .|...|++.|.+|++..|-+++
T Consensus 203 ~~~v~~G~~yRlRliNa~~~~-----~~~f~i~gH~~~VI~~-DG~~v----------~p~~~~~l~i~~GqRydvlv~~ 266 (539)
T PLN02835 203 TFSGDQGKTYMFRISNVGLST-----SLNFRIQGHTMKLVEV-EGSHT----------IQNIYDSLDVHVGQSVAVLVTL 266 (539)
T ss_pred eEEECCCCEEEEEEEEcCCCc-----cEEEEECCCEEEEEEE-CCccC----------CCceeeEEEECcCceEEEEEEc
Confidence 378999999999999988652 7999999999999998 55442 3566899999999999999998
Q ss_pred CC-ceeeeec
Q 012467 410 DN-PGAWAFH 418 (463)
Q Consensus 410 dn-pG~w~~H 418 (463)
+. +|.|.++
T Consensus 267 ~~~~g~y~i~ 276 (539)
T PLN02835 267 NQSPKDYYIV 276 (539)
T ss_pred CCCCCcEEEE
Confidence 75 6866655
|
|
| >PF07732 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR011707 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=98.84 E-value=4.4e-09 Score=87.46 Aligned_cols=89 Identities=17% Similarity=0.161 Sum_probs=68.1
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
++.++.|+.|++.+.|.... .+.+|+||...---...+|... . -.-.|.||+..+.+|++
T Consensus 27 tI~v~~Gd~v~i~~~N~l~~------~~siH~HG~~~~~~~~~DG~~~-------------~-~~~~i~pG~~~~Y~~~~ 86 (117)
T PF07732_consen 27 TIRVREGDTVRITVTNNLDE------PTSIHWHGLHQPPSPWMDGVPG-------------V-TQCPIAPGESFTYEFTA 86 (117)
T ss_dssp EEEEETTEEEEEEEEEESSS------GBSEEEETSBSTTGGGGSGGTT-------------T-SGSSBSTTEEEEEEEEE
T ss_pred EEEEEcCCeeEEEEEecccc------ccccccceeeeeeeeecCCccc-------------c-cceeEEeecceeeeEee
Confidence 59999999999999998765 8999999975321100122110 0 01247889999999999
Q ss_pred CC-ceeeeecccchHhHHccceeeeecccc
Q 012467 410 DN-PGAWAFHCHIEPHFHIGMGVVLALGVE 438 (463)
Q Consensus 410 dn-pG~w~~HCHi~~H~~~GM~~~~~~~~~ 438 (463)
+. +|.|.||||...|...||.+.|++.++
T Consensus 87 ~~~~Gt~wYH~H~~~~~~~GL~G~~iV~~~ 116 (117)
T PF07732_consen 87 NQQAGTYWYHSHVHGQQVMGLYGAIIVEPP 116 (117)
T ss_dssp SSCSEEEEEEECSTTHHHTTEEEEEEEE-T
T ss_pred eccccceeEeeCCCchhcCcCEEEEEEcCC
Confidence 99 999999999999988999999987654
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 3 (or coupled binuclear) domains. ; GO: 0005507 copper ion binding; PDB: 2QT6_B 3KW7_B 2R7E_A 3CDZ_A 1SDD_A 3G5W_D 3UAC_A 2YXV_A 3OD3_A 3NSY_A .... |
| >TIGR01480 copper_res_A copper-resistance protein, CopA family | Back alignment and domain information |
|---|
Probab=98.82 E-value=4.2e-07 Score=95.76 Aligned_cols=77 Identities=13% Similarity=0.153 Sum_probs=65.2
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
++.++.|++++|.|+|.+... .+.|+|.||+|+||+. +|.+ ..|..-|.+.|.+|+.+.|.+++
T Consensus 261 ~~~v~~G~rvRLR~INas~~~-----~f~l~I~gh~m~VIa~-DG~~----------v~Pv~vd~l~I~pGeRyDVlV~~ 324 (587)
T TIGR01480 261 TGLFRPGEKVRLRFINGSAMT-----YFDVRIPGLKLTVVAV-DGQY----------VHPVSVDEFRIAPAETFDVIVEP 324 (587)
T ss_pred eEEECCCCEEEEEEEecCCCc-----eEEEEECCCEEEEEEc-CCcC----------cCceEeCeEEEcCcceeEEEEec
Confidence 478899999999999988652 7999999999999998 4543 24677899999999999999998
Q ss_pred CCceeeeecccch
Q 012467 410 DNPGAWAFHCHIE 422 (463)
Q Consensus 410 dnpG~w~~HCHi~ 422 (463)
...|.|.+.....
T Consensus 325 ~~~g~~~i~a~~~ 337 (587)
T TIGR01480 325 TGDDAFTIFAQDS 337 (587)
T ss_pred CCCceEEEEEEec
Confidence 8788998887654
|
This model represents the CopA copper resistance protein family. CopA is related to laccase (benzenediol:oxygen oxidoreductase) and L-ascorbate oxidase, both copper-containing enzymes. Most members have a typical TAT (twin-arginine translocation) signal sequence with an Arg-Arg pair. Twin-arginine translocation is observed for a large number of periplasmic proteins that cross the inner membrane with metal-containing cofactors already bound. The combination of copper-binding sites and TAT translocation motif suggests a mechansism of resistance by packaging and export. |
| >PLN02792 oxidoreductase | Back alignment and domain information |
|---|
Probab=98.81 E-value=4.3e-07 Score=94.93 Aligned_cols=199 Identities=14% Similarity=0.119 Sum_probs=125.3
Q ss_pred eEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEE---eCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEE
Q 012467 116 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVE---ADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA 192 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via---~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~ 192 (463)
|+|++++|.++++++.|--. ...+|+-|-+.+.. .||.+. + .-.|.||+.+...++++. ..|+||-.+
T Consensus 47 P~I~~~~GD~v~V~v~N~L~---~~ttiHWHGl~q~~~~~~DGv~~----t-qcPI~PG~sftY~F~~~~-q~GT~WYHs 117 (536)
T PLN02792 47 PEIRSLTNDNLVINVHNDLD---EPFLLSWNGVHMRKNSYQDGVYG----T-TCPIPPGKNYTYDFQVKD-QVGSYFYFP 117 (536)
T ss_pred CcEEEECCCEEEEEEEeCCC---CCcCEeCCCcccCCCCccCCCCC----C-cCccCCCCcEEEEEEeCC-CccceEEec
Confidence 58999999999999999864 34566667666654 799653 1 247899999999999863 379999988
Q ss_pred EecCCCCCCCCeEE-EEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeeeecc---
Q 012467 193 GVRGRKPATPPALT-LLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTI--- 268 (463)
Q Consensus 193 ~~~~~~~~~~~~~a-~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~--- 268 (463)
...... ....+| ++.+... .. +.| .+. .++++.+.++....
T Consensus 118 H~~~q~--~~Gl~G~liI~~~~-~~-----~~p-~~~--------------------------~d~e~~i~l~Dw~~~~~ 162 (536)
T PLN02792 118 SLAVQK--AAGGYGSLRIYSLP-RI-----PVP-FPE--------------------------PAGDFTFLIGDWYRRNH 162 (536)
T ss_pred Ccchhh--hcccccceEEeCCc-cc-----CcC-CCc--------------------------ccceeEEEecccccCCH
Confidence 653221 122232 2233211 00 000 000 01111111110000
Q ss_pred -------------C-CeEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEcc
Q 012467 269 -------------N-GFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLG 334 (463)
Q Consensus 269 -------------~-~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (463)
. ......|||+... ...++.++
T Consensus 163 ~~~~~~~~~g~~~~~~~d~~liNG~~~~--------------------------------------------~~~~~~v~ 198 (536)
T PLN02792 163 TTLKKILDGGRKLPLMPDGVMINGQGVS--------------------------------------------YVYSITVD 198 (536)
T ss_pred HHHHHHhhccCcCCCCCCEEEEeccCCC--------------------------------------------CcceEEEC
Confidence 0 0011233333110 00148899
Q ss_pred CCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcCC-ce
Q 012467 335 LNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADN-PG 413 (463)
Q Consensus 335 ~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adn-pG 413 (463)
.|++++|.|.|.+... ..-|++.||+|.|++. +|.+ ..|...|++.|.+|++..|.++++. +|
T Consensus 199 ~Gk~yRlRliNa~~~~-----~~~f~i~gH~~tVI~~-DG~~----------v~p~~~~~l~i~~GqRydVlV~a~~~~g 262 (536)
T PLN02792 199 KGKTYRFRISNVGLQT-----SLNFEILGHQLKLIEV-EGTH----------TVQSMYTSLDIHVGQTYSVLVTMDQPPQ 262 (536)
T ss_pred CCCEEEEEEEEcCCCc-----eEEEEECCcEEEEEEe-CCcc----------CCCcceeEEEEccCceEEEEEEcCCCCc
Confidence 9999999999987652 7999999999999998 5544 2356679999999999999999987 57
Q ss_pred eeeec
Q 012467 414 AWAFH 418 (463)
Q Consensus 414 ~w~~H 418 (463)
.|.+.
T Consensus 263 ~Y~i~ 267 (536)
T PLN02792 263 NYSIV 267 (536)
T ss_pred eEEEE
Confidence 66654
|
|
| >TIGR03390 ascorbOXfungal L-ascorbate oxidase, fungal type | Back alignment and domain information |
|---|
Probab=98.78 E-value=4.7e-07 Score=95.19 Aligned_cols=226 Identities=12% Similarity=0.095 Sum_probs=125.7
Q ss_pred eEEEecCCCeEEEEEEecCcceEEEEEEeCceeE-EEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEe
Q 012467 116 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMV-VVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 194 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~-via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~ 194 (463)
|+|.+++|.++++++.|.-......++.+|-.+. --..||.+.. ..-.|.||+.+...++++....|+||.....
T Consensus 39 P~I~~~~GD~v~V~v~N~L~~~~ttiHwHGi~~~~~~~~DGvp~v----TQcpI~PG~sf~Y~f~~~~~q~GT~WYHsH~ 114 (538)
T TIGR03390 39 PEIRLQEGQTTWIRVYNDIPDNNVTMHWHGLTQRTAPFSDGTPLA----SQWPIPPGHFFDYEIKPEPGDAGSYFYHSHV 114 (538)
T ss_pred CeEEEeCCCEEEEEEEECCCCCCceEECCCCCCCCCCCCCCCccc----ccCCCCCCCcEEEEEEecCCCCeeeEEecCC
Confidence 5899999999999999975433444555554332 2347998852 2235889999988888753347999998765
Q ss_pred cCCCCCCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeeeeccCCeEEE
Q 012467 195 RGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKW 274 (463)
Q Consensus 195 ~~~~~~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~ 274 (463)
.. +.....+.|..++... .+ . .+ +. +....+....- .........+. .............
T Consensus 115 ~~---Q~~~l~G~lIV~~~~~-------~~-~-~~-d~----e~~l~l~Dw~~--~~~~~~~~~~~-~~~~~~~~~~d~~ 174 (538)
T TIGR03390 115 GF---QAVTAFGPLIVEDCEP-------PP-Y-KY-DD----ERILLVSDFFS--ATDEEIEQGLL-STPFTWSGETEAV 174 (538)
T ss_pred ch---hhhcceeEEEEccCCc-------cC-C-Cc-cC----cEEEEEeCCCC--CCHHHHHhhhh-ccCCccCCCCceE
Confidence 32 2222555555543110 00 0 00 00 00000000000 00000000000 0000000001124
Q ss_pred EEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCCCCCC
Q 012467 275 AINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLS 354 (463)
Q Consensus 275 ~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~~ 354 (463)
.|||+......... .++ . ..| ....+.++.|++++|+|+|.+...
T Consensus 175 liNG~~~~~~~~~~-------~~~--------------------~---~~~-~~~~~~v~~G~~yRlRlINa~~~~---- 219 (538)
T TIGR03390 175 LLNGKSGNKSFYAQ-------INP--------------------S---GSC-MLPVIDVEPGKTYRLRFIGATALS---- 219 (538)
T ss_pred EECCcccccccccc-------ccC--------------------C---CCC-cceEEEECCCCEEEEEEEccCCce----
Confidence 45554221100000 000 0 000 013588999999999999988652
Q ss_pred CCCCeeecCCc-eEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcCCc
Q 012467 355 EIHPWHLHGHD-FWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNP 412 (463)
Q Consensus 355 ~~HP~HlHG~~-f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adnp 412 (463)
..-|++.||+ |+|++. +|.+ ..|...|++.|.+|++..|.++++++
T Consensus 220 -~~~~~idgH~~~~VIa~-DG~~----------~~P~~v~~l~l~~GqRydVlv~~~~~ 266 (538)
T TIGR03390 220 -LISLGIEDHENLTIIEA-DGSY----------TKPAKIDHLQLGGGQRYSVLFKAKTE 266 (538)
T ss_pred -EEEEEECCCCeEEEEEe-CCCC----------CCceEeCeEEEccCCEEEEEEECCCc
Confidence 6899999999 999998 4543 45778899999999999999999864
|
This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. |
| >PLN02354 copper ion binding / oxidoreductase | Back alignment and domain information |
|---|
Probab=98.77 E-value=6.8e-07 Score=93.82 Aligned_cols=75 Identities=11% Similarity=0.117 Sum_probs=63.3
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
++.++.|++++|+|+|.+... ..-||+.||+|.|++. +|.+ ..|...|++.|.+|++..|.+++
T Consensus 208 ~~~v~~Gk~yRlRiINa~~~~-----~~~f~IdgH~~tVIa~-DG~~----------v~p~~~~~l~i~~GqRydVlv~a 271 (552)
T PLN02354 208 LFTMKPGKTYRYRICNVGLKS-----SLNFRIQGHKMKLVEM-EGSH----------VLQNDYDSLDVHVGQCFSVLVTA 271 (552)
T ss_pred EEEECCCCEEEEEEEecCCCc-----eEEEEECCceEEEEEe-CCcc----------cCCcceeEEEEccCceEEEEEEC
Confidence 589999999999999988652 7999999999999998 5544 23566799999999999999999
Q ss_pred CC-ceeeeeccc
Q 012467 410 DN-PGAWAFHCH 420 (463)
Q Consensus 410 dn-pG~w~~HCH 420 (463)
++ +|.|.+.-.
T Consensus 272 ~~~~g~Y~i~a~ 283 (552)
T PLN02354 272 NQAPKDYYMVAS 283 (552)
T ss_pred CCCCCcEEEEEe
Confidence 86 787776654
|
|
| >PLN02168 copper ion binding / pectinesterase | Back alignment and domain information |
|---|
Probab=98.77 E-value=5.9e-07 Score=93.95 Aligned_cols=192 Identities=11% Similarity=0.128 Sum_probs=120.0
Q ss_pred eEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEE---eCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEE
Q 012467 116 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVE---ADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA 192 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via---~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~ 192 (463)
|+|+++.|.++++++.|--.. . .+|+-|-+.+.. .||++. ..-.|.||+++...+++++ ..|+||...
T Consensus 57 P~I~~~~GD~v~V~v~N~L~~-~--ttiHWHGl~~~~~~~~DGv~g-----tQcpI~PG~sftY~F~~~~-q~GT~WYHs 127 (545)
T PLN02168 57 PLLNATANDVINVNIFNNLTE-P--FLMTWNGLQLRKNSWQDGVRG-----TNCPILPGTNWTYRFQVKD-QIGSYFYFP 127 (545)
T ss_pred CcEEEECCCEEEEEEEeCCCC-C--ccEeeCCccCCCCCCcCCCCC-----CcCCCCCCCcEEEEEEeCC-CCceEEEec
Confidence 589999999999999998753 3 345555555543 599763 2247999999999999863 379999987
Q ss_pred EecCCCCCCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeeeeccC---
Q 012467 193 GVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTIN--- 269 (463)
Q Consensus 193 ~~~~~~~~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~--- 269 (463)
..... ......+.|..++.... +.| .+ +.++++.+.++.....
T Consensus 128 H~~~Q--~~~GL~G~lII~~~~~~-----~~p-~~--------------------------~~d~e~~l~l~Dw~~~~~~ 173 (545)
T PLN02168 128 SLLLQ--KAAGGYGAIRIYNPELV-----PVP-FP--------------------------KPDEEYDILIGDWFYADHT 173 (545)
T ss_pred Chhhh--hhCcceeEEEEcCCccc-----CcC-cC--------------------------cccceeeEEEEecCCCCHH
Confidence 64321 11223444444321110 000 00 0111111111100000
Q ss_pred -------------CeEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCC
Q 012467 270 -------------GFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLN 336 (463)
Q Consensus 270 -------------~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 336 (463)
......|||+.. ...++.++.|
T Consensus 174 ~~~~~~~~g~~~~~~d~~liNG~~~---------------------------------------------~~~~~~v~~G 208 (545)
T PLN02168 174 VMRASLDNGHSLPNPDGILFNGRGP---------------------------------------------EETFFAFEPG 208 (545)
T ss_pred HHHhhhhcCCCCCCCCEEEEeccCC---------------------------------------------CcceEEeCCC
Confidence 000122332210 0114889999
Q ss_pred CEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcCC
Q 012467 337 TTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADN 411 (463)
Q Consensus 337 ~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adn 411 (463)
++++|+|.|.+... .+.|++.||+|+|++. +|.+ ..|...|++.|.+|++..|.+++++
T Consensus 209 ~~yRlRiiNa~~~~-----~~~~~IdgH~~tVIa~-DG~~----------v~p~~~~~l~i~~GqRydvlv~a~~ 267 (545)
T PLN02168 209 KTYRLRISNVGLKT-----CLNFRIQDHDMLLVET-EGTY----------VQKRVYSSLDIHVGQSYSVLVTAKT 267 (545)
T ss_pred CEEEEEEEeccCCc-----eEEEEECCcEEEEEEE-CCeE----------CCCceeeEEEEcCCceEEEEEEcCC
Confidence 99999999987652 7999999999999997 5544 3456779999999999999999975
|
|
| >TIGR03388 ascorbase L-ascorbate oxidase, plant type | Back alignment and domain information |
|---|
Probab=98.76 E-value=4e-07 Score=95.90 Aligned_cols=244 Identities=13% Similarity=0.151 Sum_probs=128.7
Q ss_pred eEEEecCCCeEEEEEEecCcceEEEEEEeCceeEE-EEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEe
Q 012467 116 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVV-VEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 194 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~v-ia~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~ 194 (463)
++|++++|+++++++.|........|+.+|....- -..||.+- +..-.|.||+++...+++++ .|+||.....
T Consensus 32 P~i~~~~Gd~v~v~v~N~l~~~~t~iHwHGl~~~~~~~~DG~~~----vtq~~I~PG~s~~y~f~~~~--~Gt~wyH~H~ 105 (541)
T TIGR03388 32 PTIRAQAGDTIVVELTNKLHTEGVVIHWHGIRQIGTPWADGTAG----VTQCAINPGETFIYNFVVDR--PGTYFYHGHY 105 (541)
T ss_pred CeEEEEcCCEEEEEEEECCCCCCccEEecCcCCcCCcccCCCCc----cccCCcCCCCEEEEEEEcCC--CEEEEEEecc
Confidence 58999999999999999865455667777764211 22688753 23457899999999999976 6999998764
Q ss_pred cCCCCCCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeeeeccCCeEEE
Q 012467 195 RGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKW 274 (463)
Q Consensus 195 ~~~~~~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~ 274 (463)
... ......+.|.+++..... .|. .+ +.+ ....+..... .........+. .............
T Consensus 106 ~~q--~~~Gl~G~liV~~~~~~~-----~p~--~~-d~e----~~l~l~Dw~~--~~~~~~~~~~~-~~~~~~~~~~d~~ 168 (541)
T TIGR03388 106 GMQ--RSAGLYGSLIVDVPDGEK-----EPF--HY-DGE----FNLLLSDWWH--KSIHEQEVGLS-SKPMRWIGEPQSL 168 (541)
T ss_pred hHH--hhccceEEEEEecCCCCC-----CCc--cc-cce----EEEEeecccC--CCHHHHHhhcc-cCCCcCCCCCcce
Confidence 211 112234444444221110 000 00 000 0000000000 00000000000 0000000000123
Q ss_pred EEecccCC-CCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCCCCC
Q 012467 275 AINNVSLT-LPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNL 353 (463)
Q Consensus 275 ~iNg~~~~-~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~ 353 (463)
.|||.... ......+. ..... .+.. +.+......++.++.|++++|+|+|.+..
T Consensus 169 liNG~g~~~~~~~~~~~------------~~~~~----~~~~-----~~~~~~~~~~~~v~~g~~~RlRliNa~~~---- 223 (541)
T TIGR03388 169 LINGRGQFNCSLAAKFS------------STNLP----QCNL-----KGNEQCAPQILHVEPGKTYRLRIASTTAL---- 223 (541)
T ss_pred EECCCCCCCCccccccC------------ccccc----hhhc-----cCCCCCCceEEEECCCCEEEEEEEccccc----
Confidence 45554211 00000000 00000 0000 00000001247899999999999998754
Q ss_pred CCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcCC-ce-eeeecc
Q 012467 354 SEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADN-PG-AWAFHC 419 (463)
Q Consensus 354 ~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adn-pG-~w~~HC 419 (463)
..+-|+++||+|+||+. +|.+ ..|..-|.+.|.+|++..|.++++. || .|-++-
T Consensus 224 -~~~~~~id~h~~~VIa~-DG~~----------v~P~~v~~l~i~~GqR~dvlv~~~~~~~~~y~ira 279 (541)
T TIGR03388 224 -AALNFAIEGHKLTVVEA-DGNY----------VEPFTVKDIDIYSGETYSVLLTTDQDPSRNYWISV 279 (541)
T ss_pred -ceEEEEECCCEEEEEEe-CCEe----------cccceeCeEEecCCCEEEEEEeCCCCCCCcEEEEE
Confidence 28999999999999998 4543 3467789999999999999999975 54 455543
|
Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. |
| >PLN02991 oxidoreductase | Back alignment and domain information |
|---|
Probab=98.74 E-value=8.7e-07 Score=92.59 Aligned_cols=197 Identities=12% Similarity=0.083 Sum_probs=123.5
Q ss_pred eEEEecCCCeEEEEEEecCcceEEEEEEeCceeEE---EEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEE
Q 012467 116 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVV---VEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA 192 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~v---ia~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~ 192 (463)
|+|+++.|+++++++.|.-. . ..+|+-|-+.+ -..||.+. + .-.|.||+.+..-+++++ ..|+||..+
T Consensus 59 P~I~~~~GD~v~V~V~N~L~-~--~ttiHWHGi~q~~~~~~DGv~~----t-QcpI~PG~sftY~F~~~~-q~GT~WYHs 129 (543)
T PLN02991 59 PDIISVTNDNLIINVFNHLD-E--PFLISWSGIRNWRNSYQDGVYG----T-TCPIPPGKNYTYALQVKD-QIGSFYYFP 129 (543)
T ss_pred CcEEEECCCEEEEEecCCCC-C--CccEEECCcccCCCccccCCCC----C-CCccCCCCcEEEEEEeCC-CCcceEEec
Confidence 58999999999999999864 3 33555555554 34799753 2 347999999999999853 379999988
Q ss_pred EecCCCCCCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeeeeccC---
Q 012467 193 GVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTIN--- 269 (463)
Q Consensus 193 ~~~~~~~~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~--- 269 (463)
...... .....+-|...+.... +.|. + ..++++.+.++.....
T Consensus 130 H~~~q~--~~Gl~G~lIV~~~~~~-----~~p~-~--------------------------~~d~d~~i~l~DW~~~~~~ 175 (543)
T PLN02991 130 SLGFHK--AAGGFGAIRISSRPLI-----PVPF-P--------------------------APADDYTVLIGDWYKTNHK 175 (543)
T ss_pred Ccchhh--hCCCeeeEEEeCCccc-----Cccc-c--------------------------cccceeEEEecceecCCHH
Confidence 753221 1223444444321110 0010 0 0111111111110000
Q ss_pred -------------CeEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCC
Q 012467 270 -------------GFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLN 336 (463)
Q Consensus 270 -------------~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 336 (463)
......|||+.. ...+.++.|
T Consensus 176 ~~~~~~~~~~~~~~~d~~liNG~~~----------------------------------------------~~~~~v~~G 209 (543)
T PLN02991 176 DLRAQLDNGGKLPLPDGILINGRGS----------------------------------------------GATLNIEPG 209 (543)
T ss_pred HHHHHhhcCCCCCCCCEEEEccCCC----------------------------------------------CceEEECCC
Confidence 000112222210 014889999
Q ss_pred CEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcCC-ce-e
Q 012467 337 TTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADN-PG-A 414 (463)
Q Consensus 337 ~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adn-pG-~ 414 (463)
++++|+|+|.+... .+-|++.||+|+|++. +|.+ ..|...|++.|.+|++..|.+++++ +| .
T Consensus 210 ~~yRlRiINa~~~~-----~~~~~idgH~~tVIa~-DG~~----------~~p~~~~~l~i~~GQRydvlv~a~~~~~~y 273 (543)
T PLN02991 210 KTYRLRISNVGLQN-----SLNFRIQNHTMKLVEV-EGTH----------TIQTPFSSLDVHVGQSYSVLITADQPAKDY 273 (543)
T ss_pred CEEEEEEEeccCCe-----eEEEEECCCEEEEEEe-CCcc----------ccceeeeEEEEcCCcEEEEEEECCCCCCcE
Confidence 99999999988652 6899999999999998 5544 2356789999999999999999988 56 4
Q ss_pred eee
Q 012467 415 WAF 417 (463)
Q Consensus 415 w~~ 417 (463)
|+.
T Consensus 274 ~i~ 276 (543)
T PLN02991 274 YIV 276 (543)
T ss_pred EEE
Confidence 543
|
|
| >PLN02191 L-ascorbate oxidase | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.4e-06 Score=92.14 Aligned_cols=71 Identities=17% Similarity=0.278 Sum_probs=60.2
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
++.++.|++++|+|+|.+.. ..+-|++.||+|.|++. +|.+ ..|...|++.|.+|++..|-+++
T Consensus 227 ~~~v~~G~~yRlRiINa~~~-----~~~~~~idgH~~tVIa~-DG~~----------v~P~~v~~l~i~~GqRydVlV~a 290 (574)
T PLN02191 227 TLRVEPNKTYRIRLASTTAL-----ASLNLAVQGHKLVVVEA-DGNY----------ITPFTTDDIDIYSGESYSVLLTT 290 (574)
T ss_pred EEEEcCCCEEEEEEEecCCc-----eeEEEEECCCeEEEEEc-CCee----------ccceEeeeEEEcCCCeEEEEEEC
Confidence 58999999999999998765 28999999999999998 4543 34778899999999999999999
Q ss_pred CC-ce--eee
Q 012467 410 DN-PG--AWA 416 (463)
Q Consensus 410 dn-pG--~w~ 416 (463)
+. +| .|+
T Consensus 291 ~~~~~~~y~i 300 (574)
T PLN02191 291 DQDPSQNYYI 300 (574)
T ss_pred CCCCCCCEEE
Confidence 87 54 454
|
|
| >PRK10883 FtsI repressor; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=4e-06 Score=86.68 Aligned_cols=74 Identities=15% Similarity=0.131 Sum_probs=59.7
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeee-cCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEE
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHL-HGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFV 408 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~Hl-HG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~ 408 (463)
.+.++.+ +++|.|.|.+... ..-|++ +||.|+||+...|.. ..|...|.+.+.+|+.+.|-++
T Consensus 221 ~~~v~~~-~~RlRliNas~~~-----~~~l~l~d~~~~~vIa~DGg~~----------~~P~~~~~l~l~pGeR~dvlVd 284 (471)
T PRK10883 221 YVEVSRG-WVRLRLLNASNAR-----RYQLQMSDGRPLHVIAGDQGFL----------PAPVSVKQLSLAPGERREILVD 284 (471)
T ss_pred eEEecCC-EEEEEEEEccCCc-----eEEEEEcCCCeEEEEEeCCCcc----------cCCcEeCeEEECCCCeEEEEEE
Confidence 3677765 7899999988642 677888 899999999854443 3466779999999999999999
Q ss_pred cCCceeeeecc
Q 012467 409 ADNPGAWAFHC 419 (463)
Q Consensus 409 adnpG~w~~HC 419 (463)
+++.+.+.+++
T Consensus 285 ~~~~~~~~l~~ 295 (471)
T PRK10883 285 MSNGDEVSITA 295 (471)
T ss_pred CCCCceEEEEC
Confidence 98878888887
|
|
| >PLN00044 multi-copper oxidase-related protein; Provisional | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.8e-05 Score=83.47 Aligned_cols=71 Identities=11% Similarity=0.148 Sum_probs=61.2
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
++.++.|++++|.|+|.+... ..-|++-||+|.|++. +|.+ ..|...|++.|.+|++..|-+++
T Consensus 218 ~i~V~~Gk~yRlRiINaa~~~-----~~~fsIdgH~mtVIa~-DG~~----------v~P~~vd~i~I~~GQRydVLV~a 281 (596)
T PLN00044 218 RINVDPGKTYRFRVHNVGVAT-----SLNFRIQGHNLLLVEA-EGSY----------TSQQNYTNLDIHVGQSYSFLLTM 281 (596)
T ss_pred eEEECCCCEEEEEEEEccCCc-----eEEEEECCCEEEEEEe-CCcc----------cCceeeeeEEEcCCceEEEEEEC
Confidence 589999999999999987652 7889999999999998 5654 35778899999999999999999
Q ss_pred CCc-e--eee
Q 012467 410 DNP-G--AWA 416 (463)
Q Consensus 410 dnp-G--~w~ 416 (463)
+.+ | .|+
T Consensus 282 ~q~~~~~Y~i 291 (596)
T PLN00044 282 DQNASTDYYV 291 (596)
T ss_pred CCCCCCceEE
Confidence 974 5 576
|
|
| >PRK10965 multicopper oxidase; Provisional | Back alignment and domain information |
|---|
Probab=98.38 E-value=4.2e-05 Score=80.04 Aligned_cols=216 Identities=15% Similarity=0.126 Sum_probs=118.7
Q ss_pred eEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEec
Q 012467 116 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVR 195 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~ 195 (463)
|+|.+++|+++++++.|--. ....++.+|-.+. -+.||++ ...|.||++++..+++++ .+|+||......
T Consensus 77 PtIr~~~Gd~v~v~~~N~L~-~~ttiHwHGl~~~-~~~DG~p-------q~~I~PG~s~~Y~f~~~q-~aGT~WYH~H~~ 146 (523)
T PRK10965 77 PAVRLQRGKAVTVDITNQLP-EETTLHWHGLEVP-GEVDGGP-------QGIIAPGGKRTVTFTVDQ-PAATCWFHPHQH 146 (523)
T ss_pred ceEEEECCCEEEEEEEECCC-CCccEEcccccCC-CccCCCC-------CCCCCCCCEEEEEeccCC-CCceEEEecCCC
Confidence 68999999999999999753 3345555554332 1478875 235789999999999887 579999987643
Q ss_pred CCC-CC-CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeee-eccCC--
Q 012467 196 GRK-PA-TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQ-NTING-- 270 (463)
Q Consensus 196 ~~~-~~-~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~-~~~~~-- 270 (463)
... .+ .....+.|.+++.... ....|. .+.... ...-+....- . .+..+.+.... ....+
T Consensus 147 g~t~~Qv~~GL~G~lIV~d~~~~---~~~lp~--~~~~~d----~~lvlqD~~~-~-----~~g~~~~~~~~~~~~~g~~ 211 (523)
T PRK10965 147 GKTGRQVAMGLAGLVLIEDDESL---KLGLPK--QWGVDD----IPVILQDKRF-S-----ADGQIDYQLDVMTAAVGWF 211 (523)
T ss_pred CCcHHHHhCcCeEEEEEcCcccc---ccCCcc--cCCCce----eeEEEEeeee-C-----CCCceeccccccccccCcc
Confidence 221 12 2233444545432110 000110 010000 0000000000 0 00000000000 00000
Q ss_pred eEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCC
Q 012467 271 FTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIR 350 (463)
Q Consensus 271 ~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~ 350 (463)
.....|||..+ | .+.++ +++++|.|.|.+...
T Consensus 212 gd~~lVNG~~~------------------------p-----------------------~~~v~-~~~~RlRliNas~~r 243 (523)
T PRK10965 212 GDTLLTNGAIY------------------------P-----------------------QHAAP-RGWLRLRLLNGCNAR 243 (523)
T ss_pred CCeEEECCccc------------------------c-----------------------eeecC-CCEEEEEEEeccCCc
Confidence 01123333321 0 13444 569999999987531
Q ss_pred CCCCCCCCeee-cCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcCCceeeeecc
Q 012467 351 PNLSEIHPWHL-HGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHC 419 (463)
Q Consensus 351 ~~~~~~HP~Hl-HG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adnpG~w~~HC 419 (463)
..-+.+ .||.|+||+.. |.+ +..|...|.+.|.+|+.+.|.+++++.|.+.+..
T Consensus 244 -----~~~l~~~dg~~~~vIa~D-G~~---------l~~P~~v~~l~lapGeR~dvlv~~~~~~~~~l~~ 298 (523)
T PRK10965 244 -----SLNLATSDGRPLYVIASD-GGL---------LAEPVKVSELPILMGERFEVLVDTSDGKAFDLVT 298 (523)
T ss_pred -----eEEEEEcCCceEEEEEeC-CCc---------ccCccEeCeEEECccceEEEEEEcCCCceEEEEE
Confidence 233444 68999999984 433 2456778999999999999999998888777655
|
|
| >PF00394 Cu-oxidase: Multicopper oxidase; InterPro: IPR001117 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=98.34 E-value=1.2e-06 Score=77.38 Aligned_cols=89 Identities=20% Similarity=0.224 Sum_probs=74.1
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
++.++.|++++|.|.|.+.. ..+.|++.||+|+|++. +|.+ ..|...|++.|.+|+.+.|.+++
T Consensus 61 ~~~v~~g~~~rlRliNa~~~-----~~~~~~i~gh~~~Via~-DG~~----------v~p~~~~~l~l~~G~R~dvlv~~ 124 (159)
T PF00394_consen 61 VIKVKPGERYRLRLINAGAS-----TSFNFSIDGHPMTVIAA-DGVP----------VEPYKVDTLVLAPGQRYDVLVTA 124 (159)
T ss_dssp EEEEETTTEEEEEEEEESSS------BEEEEETTBCEEEEEE-TTEE----------EEEEEESBEEE-TTEEEEEEEEE
T ss_pred eEEEcCCcEEEEEEEeccCC-----eeEEEEeeccceeEeee-cccc----------ccccccceEEeeCCeEEEEEEEe
Confidence 69999999999999998765 27999999999999998 4543 22678899999999999999999
Q ss_pred CC-ceeeeecc----cchHhHHccceeeee
Q 012467 410 DN-PGAWAFHC----HIEPHFHIGMGVVLA 434 (463)
Q Consensus 410 dn-pG~w~~HC----Hi~~H~~~GM~~~~~ 434 (463)
+. +|.|.+++ +...+...|+..-++
T Consensus 125 ~~~~g~y~i~~~~~~~~~~~~~~~~~~aiL 154 (159)
T PF00394_consen 125 DQPPGNYWIRASYQHDSINDPQNGNALAIL 154 (159)
T ss_dssp CSCSSEEEEEEEESSSSSHSHGGGTTEEEE
T ss_pred CCCCCeEEEEEecccCCCccCCCcEEEEEE
Confidence 98 99999999 666777777765553
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 1 (blue) domains. These domains are also present in proteins that have lost the ability to bind copper.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1RZP_A 2AVF_D 1NIA_A 1KCB_A 2NRD_A 1NIB_A 2BW4_A 1RZQ_C 2BWD_A 2BWI_A .... |
| >TIGR03095 rusti_cyanin rusticyanin | Back alignment and domain information |
|---|
Probab=98.12 E-value=1.4e-05 Score=69.20 Aligned_cols=87 Identities=16% Similarity=0.223 Sum_probs=57.8
Q ss_pred EEEccCCCEEEEEEEeCCC-CCCCCCCCCCeeecCCceEE--EeecCCCCCccccccCCCCCCCccceEEeCC---C--c
Q 012467 330 VYMLGLNTTVDVILQNANA-IRPNLSEIHPWHLHGHDFWV--LGRGEGKFTKEDEKKFNLKNPPLKNTAVIFP---Y--G 401 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~-~~~~~~~~HP~HlHG~~f~v--l~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~---~--g 401 (463)
.+.++.|+.|++++.|.+. . .|.|-||.+.-.. ....+|. +..-..-.+|+ | +
T Consensus 53 ~I~v~~Gd~V~v~v~N~~~~~------~H~~~I~~~g~~~~~~p~mdG~-------------~~~~~~~i~p~~~~g~~~ 113 (148)
T TIGR03095 53 TIVIPEGVTVHFTVINTDTDS------GHNFDISKRGPPYPYMPGMDGL-------------GFVAGTGFLPPPKSGKFG 113 (148)
T ss_pred EEEEcCCCEEEEEEEeCCCCc------cccEEeecCCCccccccccCCC-------------CccccCcccCCCCCCccc
Confidence 4899999999999999864 3 6777776432211 0000110 11111222222 2 2
Q ss_pred EEEEEEEcCCceeeeecccchHhHHccceeeeec
Q 012467 402 WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 402 ~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
+..+.|+++.+|.+.||||+..|...||.+.+.+
T Consensus 114 ~~~~tf~f~~aGtywyhC~~pgH~~~GM~G~iiV 147 (148)
T TIGR03095 114 YTDFTYHFSTAGTYWYLCTYPGHAENGMYGKIVV 147 (148)
T ss_pred eeEEEEECCCCeEEEEEcCChhHHHCCCEEEEEE
Confidence 4678899899999999999999999999988864
|
Rusticyanin is a blue copper protein, described in an obligate acidophilic chemolithoautroph, Acidithiobacillus ferrooxidans, as an electron transfer protein. It can constitute up to 5 percent of protein in cells grown on Fe(II) and is thought to be part of an electron chain for Fe(II) oxidation, with two c-type cytochromes, an aa3-type cytochrome oxidase, and 02 as terminal electron acceptor. It is rather closely related to sulfocyanin (TIGR03094). |
| >PF07731 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR011706 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=97.99 E-value=6.7e-05 Score=64.36 Aligned_cols=75 Identities=9% Similarity=0.161 Sum_probs=66.2
Q ss_pred eEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCccc-----------ceeeEeeEEecCCceEEEEEecCCCC
Q 012467 116 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYV-----------QPFEVDDMDIYSGESYSVLLTTNQDP 184 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v-----------~P~~~~~l~i~~GeR~dvlV~~~~~~ 184 (463)
..+.++.|+.++|+|+|.+.. .+.|+++|+.|+|++.++... .|...|++.|.+|++..+.++++.
T Consensus 34 ~~~~~~~g~~v~~~l~N~~~~-~Hp~HlHG~~F~vl~~~~~~~~~~~~~~~~~~~~~~~DTv~v~~~~~~~i~~~~~~-- 110 (138)
T PF07731_consen 34 PVIEVKNGDVVEIVLQNNGSM-PHPFHLHGHSFQVLGRGGGPWNPDDTQSYNPENPGWRDTVLVPPGGWVVIRFRADN-- 110 (138)
T ss_dssp SEEEEETTSEEEEEEEECTTS-SEEEEETTSEEEEEEETTEESTTHCGGCCCSSSSSEESEEEEETTEEEEEEEEETS--
T ss_pred ceEEEeCCCEEEEEEECCCCC-ccceEEEeeEEEeeecCCcccccccccccccccCcccccccccceeEEEEEEEeec--
Confidence 478999999999999997754 899999999999999999984 577899999999999999999974
Q ss_pred CCceEEEEE
Q 012467 185 SYNYWISAG 193 (463)
Q Consensus 185 ~g~y~ir~~ 193 (463)
+|.|-+.-.
T Consensus 111 ~G~w~~HCH 119 (138)
T PF07731_consen 111 PGPWLFHCH 119 (138)
T ss_dssp TEEEEEEES
T ss_pred ceEEEEEEc
Confidence 688777643
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 2 domains.; GO: 0005507 copper ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3GDC_C 3ZX1_A 2YAH_A 2YAR_A 2YAQ_A 2YAO_A 2YAM_A 2YAF_A 2YAP_A 2XU9_A .... |
| >KOG1263 consensus Multicopper oxidases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.0014 Score=68.78 Aligned_cols=223 Identities=15% Similarity=0.213 Sum_probs=129.3
Q ss_pred eEEEecCCCeEEEEEEecCcceEEEEEEeCce-eEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEe
Q 012467 116 QILHVQPNKTYRLRIASTTALASLNLAVKNHK-MVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 194 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~-~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~ 194 (463)
|.|.++.|.++.++++|-. ...+.++-.|-. ..---.||.++ ..=.|.|||.|-.-++++. ..|+||-.+..
T Consensus 59 P~I~~~~gD~ivV~v~N~~-~~~~sihWhGv~q~kn~w~DG~~~-----TqCPI~Pg~~~tY~F~v~~-q~GT~~yh~h~ 131 (563)
T KOG1263|consen 59 PTINAEEGDTIVVNVVNRL-DEPFSIHWHGVRQRKNPWQDGVYI-----TQCPIQPGENFTYRFTVKD-QIGTLWYHSHV 131 (563)
T ss_pred CeEEEEeCCEEEEEEEeCC-CCceEEEeccccccCCccccCCcc-----ccCCcCCCCeEEEEEEeCC-cceeEEEeecc
Confidence 5899999999999999994 466666666643 23345599543 3335789999999999986 47899888765
Q ss_pred cCCCCCCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeeeeccCCeEEE
Q 012467 195 RGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKW 274 (463)
Q Consensus 195 ~~~~~~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~ 274 (463)
.... .....+-|........ + .+. ...++++.+.++. |
T Consensus 132 ~~~R--a~G~~G~liI~~~~~~--p-~pf-----------------------------~~pd~E~~ill~d--------W 169 (563)
T KOG1263|consen 132 SWQR--ATGVFGALIINPRPGL--P-VPF-----------------------------PKPDKEFTILLGD--------W 169 (563)
T ss_pred cccc--ccCceeEEEEcCCccC--C-CCC-----------------------------CCCCceeEEEeEe--------e
Confidence 4332 1223444443311100 0 000 0224444444432 2
Q ss_pred EEe--cccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCCCC
Q 012467 275 AIN--NVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPN 352 (463)
Q Consensus 275 ~iN--g~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~ 352 (463)
.-+ ...+.. ... ..+.. +.. | +.+.+.+.+. ....|...+.+..|+++.|+|.|.+..
T Consensus 170 ~~~~~~~~l~~-------~~~--~~~~~-p~~-~----D~~~iNg~~g--~~~~~~~~l~v~pGktY~lRiiN~g~~--- 229 (563)
T KOG1263|consen 170 YKNLNHKNLKN-------FLD--RTGAL-PNP-S----DGVLINGRSG--FLYNCTPTLTVEPGKTYRLRIINAGLN--- 229 (563)
T ss_pred ccccCHHHHHH-------hhc--cCCCC-CCC-C----CceEECCCCC--cccCceeEEEEcCCCEEEEEEEccccc---
Confidence 221 100000 000 00000 000 0 0000000000 001123468999999999999998765
Q ss_pred CCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcCC-ce-eeeeccc
Q 012467 353 LSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADN-PG-AWAFHCH 420 (463)
Q Consensus 353 ~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adn-pG-~w~~HCH 420 (463)
...+ |.+-||.+.|+.. +|.+ ..|.--|++.|-+|.+..+-.+||. ++ .|+.=|=
T Consensus 230 -~~l~-F~I~~H~ltvVe~-Dg~y----------~~p~~~~~l~i~~GQ~~~vLvtadq~~~~Y~i~~~~ 286 (563)
T KOG1263|consen 230 -TSLN-FSIANHQLTVVEV-DGAY----------TKPFTTDSLDIHPGQTYSVLLTADQSPGDYYIAASP 286 (563)
T ss_pred -cceE-EEECCeEEEEEEe-cceE----------EeeeeeceEEEcCCcEEEEEEeCCCCCCcEEEEEEe
Confidence 2255 9999999999998 5554 3456779999999999999999997 55 4655443
|
|
| >TIGR02656 cyanin_plasto plastocyanin | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00011 Score=59.25 Aligned_cols=81 Identities=17% Similarity=0.215 Sum_probs=57.7
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.+.++.|++|+|+ |.+.. .|-+.++...+..-.. .+ ......+++.+.||+...+.|..
T Consensus 18 ~i~v~~G~~V~~~--N~~~~------~H~~~~~~~~~~~~~~---~~----------~~~~~~~~~~~~pG~t~~~tF~~ 76 (99)
T TIGR02656 18 KISIAAGDTVEWV--NNKGG------PHNVVFDEDAVPAGVK---EL----------AKSLSHKDLLNSPGESYEVTFST 76 (99)
T ss_pred EEEECCCCEEEEE--ECCCC------CceEEECCCCCccchh---hh----------cccccccccccCCCCEEEEEeCC
Confidence 3899999999887 65545 7888776543221110 00 00122467888999999888876
Q ss_pred CCceeeeecccchHhHHccceeeeec
Q 012467 410 DNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 410 dnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
||.|.|+|- .|..+||.+.+.+
T Consensus 77 --~G~y~y~C~--~H~~aGM~G~I~V 98 (99)
T TIGR02656 77 --PGTYTFYCE--PHRGAGMVGKITV 98 (99)
T ss_pred --CEEEEEEcC--CccccCCEEEEEE
Confidence 999999998 8999999988864
|
Members of this family are plastocyanin, a blue copper protein related to pseudoazurin, halocyanin, amicyanin, etc. This protein, located in the thylakoid luman, performs electron transport to photosystem I in Cyanobacteria and chloroplasts. |
| >TIGR03096 nitroso_cyanin nitrosocyanin | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00042 Score=58.20 Aligned_cols=58 Identities=22% Similarity=0.394 Sum_probs=48.8
Q ss_pred EEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcC
Q 012467 331 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 410 (463)
Q Consensus 331 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~ad 410 (463)
+.++.|+.|+|++.|.+.. .|.|-++++.+ ...|++|+...|+|.++
T Consensus 63 I~VkaGD~Vtl~vtN~d~~------~H~f~i~~~gi---------------------------s~~I~pGet~TitF~ad 109 (135)
T TIGR03096 63 LVVKKGTPVKVTVENKSPI------SEGFSIDAYGI---------------------------SEVIKAGETKTISFKAD 109 (135)
T ss_pred EEECCCCEEEEEEEeCCCC------ccceEECCCCc---------------------------ceEECCCCeEEEEEECC
Confidence 8999999999999998866 78777766421 24677899999999999
Q ss_pred Cceeeeecccc
Q 012467 411 NPGAWAFHCHI 421 (463)
Q Consensus 411 npG~w~~HCHi 421 (463)
.||.+-|||-+
T Consensus 110 KpG~Y~y~C~~ 120 (135)
T TIGR03096 110 KAGAFTIWCQL 120 (135)
T ss_pred CCEEEEEeCCC
Confidence 99999999974
|
Nitrosocyanin, as described from the obligate chemolithoautotroph Nitrosomonas europaea, is a red copper protein of unknown function with sequence similarity to a number of blue copper redox proteins. |
| >COG2132 SufI Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.017 Score=59.94 Aligned_cols=75 Identities=16% Similarity=0.103 Sum_probs=58.4
Q ss_pred EEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcC
Q 012467 331 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 410 (463)
Q Consensus 331 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~ad 410 (463)
+....+.++++.|.|.+.. ...=+++.|++++|++...+... +...|.+.+-+++...|..++.
T Consensus 201 ~~~~~~g~~rlRl~n~~~~-----~~~~~~~~~~~~~Vi~~DG~~v~-----------~~~~d~~~l~p~er~~v~v~~~ 264 (451)
T COG2132 201 FKAVPGGVVRLRLLNAGNA-----RTYHLALGGGPLTVIAVDGGPLP-----------PVSVDELYLAPGERYEVLVDMN 264 (451)
T ss_pred eeecCCCeEEEEEEecCCc-----eEEEEEecCceEEEEEeCCcCcC-----------ceeeeeEEecCcceEEEEEEcC
Confidence 3344555699999998833 15666667999999998543321 2467999999999999999999
Q ss_pred Cceeeeecccc
Q 012467 411 NPGAWAFHCHI 421 (463)
Q Consensus 411 npG~w~~HCHi 421 (463)
+.|.+.+.|.-
T Consensus 265 ~~~~~~l~~~~ 275 (451)
T COG2132 265 DGGAVTLTALG 275 (451)
T ss_pred CCCeEEEEecc
Confidence 99999999987
|
|
| >PF13473 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 1IC0_E 1IBY_D | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0028 Score=51.48 Aligned_cols=67 Identities=18% Similarity=0.320 Sum_probs=43.8
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.+.++.|+.+.+++.|.+.. .|-|.+.+. .-...|++|+...+.|.+
T Consensus 36 ~i~v~~G~~v~l~~~N~~~~------~h~~~i~~~---------------------------~~~~~l~~g~~~~~~f~~ 82 (104)
T PF13473_consen 36 TITVKAGQPVTLTFTNNDSR------PHEFVIPDL---------------------------GISKVLPPGETATVTFTP 82 (104)
T ss_dssp EEEEETTCEEEEEEEE-SSS-------EEEEEGGG---------------------------TEEEEE-TT-EEEEEEEE
T ss_pred EEEEcCCCeEEEEEEECCCC------cEEEEECCC---------------------------ceEEEECCCCEEEEEEcC
Confidence 48999999999999999865 555444441 122678899999999999
Q ss_pred CCceeeeecccchHhHHccce
Q 012467 410 DNPGAWAFHCHIEPHFHIGMG 430 (463)
Q Consensus 410 dnpG~w~~HCHi~~H~~~GM~ 430 (463)
+.||.+-|+|-+-.+ +.|..
T Consensus 83 ~~~G~y~~~C~~~~~-m~G~l 102 (104)
T PF13473_consen 83 LKPGEYEFYCTMHPN-MKGTL 102 (104)
T ss_dssp -S-EEEEEB-SSS-T-TB---
T ss_pred CCCEEEEEEcCCCCc-ceecc
Confidence 999999999996665 45554
|
|
| >PF00127 Copper-bind: Copper binding proteins, plastocyanin/azurin family; InterPro: IPR000923 Blue (type 1) copper proteins are small proteins which bind a single copper atom and which are characterised by an intense electronic absorption band near 600 nm [, ] | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.017 Score=46.41 Aligned_cols=81 Identities=16% Similarity=0.301 Sum_probs=53.2
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.+.++.|++|.|+.. +.. .|.+.+ ... ...... +..... ..-.+..+.+|....+.|.
T Consensus 18 ~i~V~~G~tV~~~n~--~~~------~Hnv~~-------~~~-~~~~~~-~~~~~~----~~~~~~~~~~G~~~~~tF~- 75 (99)
T PF00127_consen 18 EITVKAGDTVTFVNN--DSM------PHNVVF-------VAD-GMPAGA-DSDYVP----PGDSSPLLAPGETYSVTFT- 75 (99)
T ss_dssp EEEEETTEEEEEEEE--SSS------SBEEEE-------ETT-SSHTTG-GHCHHS----TTCEEEEBSTTEEEEEEEE-
T ss_pred EEEECCCCEEEEEEC--CCC------CceEEE-------ecc-cccccc-cccccC----ccccceecCCCCEEEEEeC-
Confidence 489999999998765 333 565443 221 100000 000000 1116677889999888888
Q ss_pred CCceeeeecccchHhHHccceeeeec
Q 012467 410 DNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 410 dnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
.+|.+.|+|- - |...||-+.+.+
T Consensus 76 -~~G~y~y~C~-P-H~~~GM~G~i~V 98 (99)
T PF00127_consen 76 -KPGTYEYYCT-P-HYEAGMVGTIIV 98 (99)
T ss_dssp -SSEEEEEEET-T-TGGTTSEEEEEE
T ss_pred -CCeEEEEEcC-C-CcccCCEEEEEE
Confidence 9999999999 4 999999988864
|
The most well known members of this class of proteins are the plant chloroplastic plastocyanins, which exchange electrons with cytochrome c6, and the distantly related bacterial azurins, which exchange electrons with cytochrome c551. This family of proteins also includes amicyanin from bacteria such as Methylobacterium extorquens or Paracoccus versutus (Thiobacillus versutus) that can grow on methylamine; auracyanins A and B from Chloroflexus aurantiacus []; blue copper protein from Alcaligenes faecalis; cupredoxin (CPC) from Cucumis sativus (Cucumber) peelings []; cusacyanin (basic blue protein; plantacyanin, CBP) from cucumber; halocyanin from Natronomonas pharaonis (Natronobacterium pharaonis) [], a membrane associated copper-binding protein; pseudoazurin from Pseudomonas; rusticyanin from Thiobacillus ferrooxidans []; stellacyanin from Rhus vernicifera (Japanese lacquer tree); umecyanin from the roots of Armoracia rusticana (Horseradish); and allergen Ra3 from ragweed. This pollen protein is evolutionary related to the above proteins, but seems to have lost the ability to bind copper. Although there is an appreciable amount of divergence in the sequences of all these proteins, the copper ligand sites are conserved.; GO: 0005507 copper ion binding, 0009055 electron carrier activity; PDB: 1UAT_A 1CUO_A 1PLC_A 4PCY_A 3PCY_A 1PND_A 1PNC_A 1JXG_A 6PCY_A 1TKW_A .... |
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.012 Score=61.91 Aligned_cols=75 Identities=19% Similarity=0.352 Sum_probs=53.5
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.+.++.|+.|.|+|.|.+... ...|-|.+-++.. -+.+.||....+.|++
T Consensus 556 ~i~Vk~GDeVt~~lTN~d~~~---DViHGF~Ip~~nI---------------------------~~dv~PG~t~svtF~a 605 (635)
T PRK02888 556 EFTVKQGDEVTVIVTNLDKVE---DLTHGFAIPNYGV---------------------------NMEVAPQATASVTFTA 605 (635)
T ss_pred eEEecCCCEEEEEEEeCCccc---ccccceeecccCc---------------------------cEEEcCCceEEEEEEc
Confidence 477899999999999964310 1156655533321 1356689999999999
Q ss_pred CCceeeeecccc---hHhHHccceeeeecc
Q 012467 410 DNPGAWAFHCHI---EPHFHIGMGVVLALG 436 (463)
Q Consensus 410 dnpG~w~~HCHi---~~H~~~GM~~~~~~~ 436 (463)
+.||.|.+||.. ..|. +|...+.+.
T Consensus 606 dkPGvy~~~CtefCGa~H~--~M~G~~iVe 633 (635)
T PRK02888 606 DKPGVYWYYCTWFCHALHM--EMRGRMLVE 633 (635)
T ss_pred CCCEEEEEECCcccccCcc--cceEEEEEE
Confidence 999999999987 4443 777766553
|
|
| >PRK02710 plastocyanin; Provisional | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.016 Score=48.20 Aligned_cols=70 Identities=20% Similarity=0.272 Sum_probs=50.9
Q ss_pred EEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcC
Q 012467 331 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 410 (463)
Q Consensus 331 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~ad 410 (463)
+.++.|++|+|+ |.+.. .|.+.+.+... + ..++ ..+.+|+...+.|..
T Consensus 49 i~v~~Gd~V~~~--N~~~~------~H~v~~~~~~~---------~-------------~~~~-~~~~pg~t~~~tF~~- 96 (119)
T PRK02710 49 LTIKAGDTVKWV--NNKLA------PHNAVFDGAKE---------L-------------SHKD-LAFAPGESWEETFSE- 96 (119)
T ss_pred EEEcCCCEEEEE--ECCCC------CceEEecCCcc---------c-------------cccc-cccCCCCEEEEEecC-
Confidence 899999999885 65544 78876543211 0 0112 346788888877776
Q ss_pred CceeeeecccchHhHHccceeeeec
Q 012467 411 NPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 411 npG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
||.+.|+|= .|...||-+.+.+
T Consensus 97 -~G~y~y~C~--~H~~~gM~G~I~V 118 (119)
T PRK02710 97 -AGTYTYYCE--PHRGAGMVGKITV 118 (119)
T ss_pred -CEEEEEEcC--CCccCCcEEEEEE
Confidence 999999997 8999999988865
|
|
| >PF07732 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR011707 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.0086 Score=49.74 Aligned_cols=88 Identities=18% Similarity=0.206 Sum_probs=59.9
Q ss_pred eEEEecCCCeEEEEEEecCcceEEEEEEeCceeEE-EEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEe
Q 012467 116 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVV-VEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 194 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~v-ia~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~ 194 (463)
|+|.++.|+++++++.|.. .....|+..|-.+.- -..||.+-.+ .-.|.||+++...+++++ ..|.||-....
T Consensus 26 PtI~v~~Gd~v~i~~~N~l-~~~~siH~HG~~~~~~~~~DG~~~~~----~~~i~pG~~~~Y~~~~~~-~~Gt~wYH~H~ 99 (117)
T PF07732_consen 26 PTIRVREGDTVRITVTNNL-DEPTSIHWHGLHQPPSPWMDGVPGVT----QCPIAPGESFTYEFTANQ-QAGTYWYHSHV 99 (117)
T ss_dssp EEEEEETTEEEEEEEEEES-SSGBSEEEETSBSTTGGGGSGGTTTS----GSSBSTTEEEEEEEEESS-CSEEEEEEECS
T ss_pred CEEEEEcCCeeEEEEEecc-ccccccccceeeeeeeeecCCccccc----ceeEEeecceeeeEeeec-cccceeEeeCC
Confidence 6899999999999999988 444556666533211 1267765422 245899999999999998 57999998765
Q ss_pred cCCCCCCCCeEEEEEeC
Q 012467 195 RGRKPATPPALTLLNYH 211 (463)
Q Consensus 195 ~~~~~~~~~~~a~l~y~ 211 (463)
.. .......+.|.++
T Consensus 100 ~~--~~~~GL~G~~iV~ 114 (117)
T PF07732_consen 100 HG--QQVMGLYGAIIVE 114 (117)
T ss_dssp TT--HHHTTEEEEEEEE
T ss_pred Cc--hhcCcCEEEEEEc
Confidence 44 1123344444443
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 3 (or coupled binuclear) domains. ; GO: 0005507 copper ion binding; PDB: 2QT6_B 3KW7_B 2R7E_A 3CDZ_A 1SDD_A 3G5W_D 3UAC_A 2YXV_A 3OD3_A 3NSY_A .... |
| >COG4454 Uncharacterized copper-binding protein [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.02 Score=48.88 Aligned_cols=93 Identities=19% Similarity=0.233 Sum_probs=65.5
Q ss_pred EEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcC
Q 012467 331 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 410 (463)
Q Consensus 331 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~ad 410 (463)
..++.|++++.++.|.... .|=|-+- ++.... +.+... ....-..---..++.|.||....+-+++.
T Consensus 65 ~~v~aG~tv~~v~~n~~el------~hef~~~---~~~~~~--~~~~~~--~~~~Dme~d~~~~v~L~PG~s~elvv~ft 131 (158)
T COG4454 65 FEVKAGETVRFVLKNEGEL------KHEFTMD---APDKNL--EHVTHM--ILADDMEHDDPNTVTLAPGKSGELVVVFT 131 (158)
T ss_pred ccccCCcEEeeeecCcccc------eEEEecc---Cccccc--hhHHHh--hhCCccccCCcceeEeCCCCcEEEEEEec
Confidence 7789999999999998876 5554443 111111 111100 00000111235789999999999999999
Q ss_pred CceeeeecccchHhHHccceeeeecc
Q 012467 411 NPGAWAFHCHIEPHFHIGMGVVLALG 436 (463)
Q Consensus 411 npG~w~~HCHi~~H~~~GM~~~~~~~ 436 (463)
++|.+-|-|-|-+|.+.||-+.|.+.
T Consensus 132 ~~g~ye~~C~iPGHy~AGM~g~itV~ 157 (158)
T COG4454 132 GAGKYEFACNIPGHYEAGMVGEITVS 157 (158)
T ss_pred CCccEEEEecCCCcccCCcEEEEEeC
Confidence 99999999999999999999988654
|
|
| >TIGR03096 nitroso_cyanin nitrosocyanin | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.044 Score=46.17 Aligned_cols=60 Identities=13% Similarity=0.221 Sum_probs=47.7
Q ss_pred CceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEE
Q 012467 114 APQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA 192 (463)
Q Consensus 114 ~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~ 192 (463)
.|..|+|++|.+++|++.|... ....+.++++. -...|.|||+..+-+++++ +|.|+..-
T Consensus 59 ~P~~I~VkaGD~Vtl~vtN~d~-~~H~f~i~~~g----------------is~~I~pGet~TitF~adK--pG~Y~y~C 118 (135)
T TIGR03096 59 EPEALVVKKGTPVKVTVENKSP-ISEGFSIDAYG----------------ISEVIKAGETKTISFKADK--AGAFTIWC 118 (135)
T ss_pred cCCEEEECCCCEEEEEEEeCCC-CccceEECCCC----------------cceEECCCCeEEEEEECCC--CEEEEEeC
Confidence 3458999999999999999886 45666666542 1567899999999999987 79998753
|
Nitrosocyanin, as described from the obligate chemolithoautotroph Nitrosomonas europaea, is a red copper protein of unknown function with sequence similarity to a number of blue copper redox proteins. |
| >TIGR03095 rusti_cyanin rusticyanin | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.068 Score=46.29 Aligned_cols=74 Identities=12% Similarity=0.029 Sum_probs=45.1
Q ss_pred EEEecCCCeEEEEEEecCcceEEEEEEeCceeEE---EEeCCcccceeeEeeEEecCCce--EEEEEecCCCCCCceEEE
Q 012467 117 ILHVQPNKTYRLRIASTTALASLNLAVKNHKMVV---VEADGNYVQPFEVDDMDIYSGES--YSVLLTTNQDPSYNYWIS 191 (463)
Q Consensus 117 ~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~v---ia~DG~~v~P~~~~~l~i~~GeR--~dvlV~~~~~~~g~y~ir 191 (463)
.|++++|++++|++.|......+.|.|..+.... -..||.+..+.....-...+|+. .++..++++ +|.||..
T Consensus 53 ~I~v~~Gd~V~v~v~N~~~~~~H~~~I~~~g~~~~~~p~mdG~~~~~~~~i~p~~~~g~~~~~~~tf~f~~--aGtywyh 130 (148)
T TIGR03095 53 TIVIPEGVTVHFTVINTDTDSGHNFDISKRGPPYPYMPGMDGLGFVAGTGFLPPPKSGKFGYTDFTYHFST--AGTYWYL 130 (148)
T ss_pred EEEEcCCCEEEEEEEeCCCCccccEEeecCCCccccccccCCCCccccCcccCCCCCCccceeEEEEECCC--CeEEEEE
Confidence 7999999999999999976445556665432211 13576543221110001123544 478888875 6999987
Q ss_pred E
Q 012467 192 A 192 (463)
Q Consensus 192 ~ 192 (463)
-
T Consensus 131 C 131 (148)
T TIGR03095 131 C 131 (148)
T ss_pred c
Confidence 4
|
Rusticyanin is a blue copper protein, described in an obligate acidophilic chemolithoautroph, Acidithiobacillus ferrooxidans, as an electron transfer protein. It can constitute up to 5 percent of protein in cells grown on Fe(II) and is thought to be part of an electron chain for Fe(II) oxidation, with two c-type cytochromes, an aa3-type cytochrome oxidase, and 02 as terminal electron acceptor. It is rather closely related to sulfocyanin (TIGR03094). |
| >PF13473 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 1IC0_E 1IBY_D | Back alignment and domain information |
|---|
Probab=94.95 E-value=0.11 Score=41.93 Aligned_cols=59 Identities=14% Similarity=0.196 Sum_probs=40.4
Q ss_pred CceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEE
Q 012467 114 APQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWIS 191 (463)
Q Consensus 114 ~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir 191 (463)
.|..+++++|+.++|.+.|.+... +.|.+++. . ....|.+|+...+.+...+ +|.|.+.
T Consensus 33 ~P~~i~v~~G~~v~l~~~N~~~~~-h~~~i~~~---------------~-~~~~l~~g~~~~~~f~~~~--~G~y~~~ 91 (104)
T PF13473_consen 33 SPSTITVKAGQPVTLTFTNNDSRP-HEFVIPDL---------------G-ISKVLPPGETATVTFTPLK--PGEYEFY 91 (104)
T ss_dssp ES-EEEEETTCEEEEEEEE-SSS--EEEEEGGG---------------T-EEEEE-TT-EEEEEEEE-S---EEEEEB
T ss_pred ecCEEEEcCCCeEEEEEEECCCCc-EEEEECCC---------------c-eEEEECCCCEEEEEEcCCC--CEEEEEE
Confidence 345899999999999999998664 66666651 1 2267889999999987775 6898764
|
|
| >TIGR02375 pseudoazurin pseudoazurin | Back alignment and domain information |
|---|
Probab=93.88 E-value=0.25 Score=40.75 Aligned_cols=35 Identities=20% Similarity=0.499 Sum_probs=29.0
Q ss_pred CCcEEEEEEEcCCceeeeecccchHhHHccceeeeeccc
Q 012467 399 PYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGV 437 (463)
Q Consensus 399 ~~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~ 437 (463)
+++...+.| +.+|.+-|+|- .|...||-+.+.++.
T Consensus 54 ~g~~~~~tF--~~~G~Y~Y~C~--pH~~~GM~G~V~Vg~ 88 (116)
T TIGR02375 54 INEEYTVTV--TEEGVYGVKCT--PHYGMGMVALIQVGD 88 (116)
T ss_pred CCCEEEEEe--CCCEEEEEEcC--CCccCCCEEEEEECC
Confidence 455555555 68999999998 999999999998876
|
Pseudoazurin, also called cupredoxin, is a small, blue periplasmic protein with a single bound copper atom. Pseudoazurin is related plastocyanins. Several examples of pseudoazurin are encoded by a neighboring gene for, or have been shown to transfer electrons to, copper-containing nitrite reductases (TIGR02376) of the same species. |
| >TIGR03102 halo_cynanin halocyanin domain | Back alignment and domain information |
|---|
Probab=93.09 E-value=0.53 Score=38.79 Aligned_cols=72 Identities=21% Similarity=0.259 Sum_probs=47.9
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.+.++.|++|.|+-++.. . .|-.. +.+.+.|+. ......+|+...+.|
T Consensus 43 ~ltV~~GdTVtw~~~~d~-~------~HnV~---------s~~~~~f~s--------------~~~~~~~G~t~s~Tf-- 90 (115)
T TIGR03102 43 AIRVDPGTTVVWEWTGEG-G------GHNVV---------SDGDGDLDE--------------SERVSEEGTTYEHTF-- 90 (115)
T ss_pred EEEECCCCEEEEEECCCC-C------CEEEE---------ECCCCCccc--------------cccccCCCCEEEEEe--
Confidence 389999999999754322 2 45532 222233320 112334677766666
Q ss_pred CCceeeeecccchHhHHccceeeeec
Q 012467 410 DNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 410 dnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
+.||.+.|+|- .|...||-+.+.+
T Consensus 91 ~~~G~Y~Y~C~--pH~~~gM~G~I~V 114 (115)
T TIGR03102 91 EEPGIYLYVCV--PHEALGMKGAVVV 114 (115)
T ss_pred cCCcEEEEEcc--CCCCCCCEEEEEE
Confidence 68999999998 8999999988865
|
Halocyanins are blue (type I) copper redox proteins found in halophilic archaea such as Natronobacterium pharaonis. This model represents a domain duplicated in some halocyanins, while appearing once in others. This domain includes the characteristic copper ligand residues. This family does not include plastocyanins, and does not include certain divergent paralogs of halocyanin. |
| >TIGR02657 amicyanin amicyanin | Back alignment and domain information |
|---|
Probab=92.81 E-value=0.58 Score=36.06 Aligned_cols=71 Identities=21% Similarity=0.267 Sum_probs=44.1
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.+.++.|++|.|+ |.+.. .|-++++...+ +.. .+.. ..+.+|.... +++
T Consensus 12 ~i~v~~GdtVt~~--N~d~~------~Hnv~~~~g~~-------~~~-------------~~~~-~~~~~g~~~~--~tf 60 (83)
T TIGR02657 12 ELHVKVGDTVTWI--NREAM------PHNVHFVAGVL-------GEA-------------ALKG-PMMKKEQAYS--LTF 60 (83)
T ss_pred EEEECCCCEEEEE--ECCCC------CccEEecCCCC-------ccc-------------cccc-cccCCCCEEE--EEC
Confidence 4899999999884 66555 78887654221 000 1111 1234566555 455
Q ss_pred CCceeeeecccchHhHHccceeeeec
Q 012467 410 DNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 410 dnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
+.||.+.|||=+ |- +|.+.+.+
T Consensus 61 ~~~G~y~y~C~~--Hp--~M~G~v~V 82 (83)
T TIGR02657 61 TEAGTYDYHCTP--HP--FMRGKVVV 82 (83)
T ss_pred CCCEEEEEEcCC--CC--CCeEEEEE
Confidence 789999999986 44 47666543
|
Members of this family are amicyanin, a type I blue copper protein that accepts electrons from the tryptophan tryptophylquinone (TTQ) cofactor of the methylamine dehydrogenase light chain and then transfers them to the heme group of cytochrome c-551i. Amicyanin, methylamine dehydrogenase, and cytochrome c-551i are periplasmic and form a complex. This system has been studied primarily in Paracoccus denitrificans and Methylobacterium extorquens. Related type I blue copper proteins include plastocyanin, pseudoazurin, halocyanin, etc. |
| >PF00116 COX2: Cytochrome C oxidase subunit II, periplasmic domain This family corresponds to chains b and o | Back alignment and domain information |
|---|
Probab=92.73 E-value=0.7 Score=38.44 Aligned_cols=60 Identities=18% Similarity=0.270 Sum_probs=46.8
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.+.++.|+.|++.+.+.+. .|.|.+-+....+ .+.||....+.|++
T Consensus 47 ~l~lp~g~~v~~~ltS~DV-------iHsf~ip~~~~k~---------------------------d~~PG~~~~~~~~~ 92 (120)
T PF00116_consen 47 ELVLPAGQPVRFHLTSEDV-------IHSFWIPELGIKM---------------------------DAIPGRTNSVTFTP 92 (120)
T ss_dssp EEEEETTSEEEEEEEESSS--------EEEEETTCTEEE---------------------------EEBTTCEEEEEEEE
T ss_pred eecccccceEeEEEEcCCc-------cccccccccCccc---------------------------ccccccceeeeeee
Confidence 4899999999999999876 4777666544332 34578999999999
Q ss_pred CCceeeeecccchH
Q 012467 410 DNPGAWAFHCHIEP 423 (463)
Q Consensus 410 dnpG~w~~HCHi~~ 423 (463)
+.||.+...|...=
T Consensus 93 ~~~G~y~~~C~e~C 106 (120)
T PF00116_consen 93 DKPGTYYGQCAEYC 106 (120)
T ss_dssp SSSEEEEEEE-SSS
T ss_pred ccCCcEEEcCcccc
Confidence 99999999998543
|
; InterPro: IPR002429 Cytochrome c oxidase (1.9.3.1 from EC) [, ] is an oligomeric enzymatic complex which is a component of the respiratory chain and is involved in the transfer of electrons from cytochrome c to oxygen. In eukaryotes this enzyme complex is located in the mitochondrial inner membrane; in aerobic prokaryotes it is found in the plasma membrane. The number of polypeptides in the complex ranges from 3-4 (prokaryotes), up to 13(mammals). Subunit 2 (CO II) transfers the electrons from cytochrome c to the catalytic subunit 1. It contains two adjacent transmembrane regions in its N terminus and the major part of the protein is exposed to the periplasmic or to the mitochondrial intermembrane space, respectively. CO II provides the substrate-binding site and contains a copper centre called Cu(A), probably the primary acceptor in cytochrome c oxidase. An exception is the corresponding subunit of the cbb3-type oxidase which lacks the copper A redox-centre. Several bacterial CO II have a C-terminal extension that contains a covalently bound haem c.; GO: 0004129 cytochrome-c oxidase activity, 0005507 copper ion binding, 0016020 membrane; PDB: 3OMN_D 3OMA_B 3OMI_D 3OM3_B 3EHB_B 1AR1_B 1QLE_B 3HB3_B 2IWK_B 2IWF_A .... |
| >PF12690 BsuPI: Intracellular proteinase inhibitor; InterPro: IPR020481 BsuPI is a intracellular proteinase inhibitor that directly regulates the major intracellular proteinase (ISP-1) activity in vivo | Back alignment and domain information |
|---|
Probab=91.50 E-value=0.81 Score=35.26 Aligned_cols=31 Identities=19% Similarity=0.190 Sum_probs=21.7
Q ss_pred eEeeEEecCCceEEEEEecCCCC--CCceEEEE
Q 012467 162 EVDDMDIYSGESYSVLLTTNQDP--SYNYWISA 192 (463)
Q Consensus 162 ~~~~l~i~~GeR~dvlV~~~~~~--~g~y~ir~ 192 (463)
......|.|||...+-.+.+... +|.|.+.|
T Consensus 50 al~~~~l~pGe~~~~~~~~~~~~~~~G~Y~~~a 82 (82)
T PF12690_consen 50 ALQEETLEPGESLTYEETWDLKDLSPGEYTLEA 82 (82)
T ss_dssp --EEEEE-TT-EEEEEEEESS----SEEEEEEE
T ss_pred eeeEEEECCCCEEEEEEEECCCCCCCceEEEeC
Confidence 45678999999999999988754 79998864
|
It inhibits ISP-1 in the early stages of sporulation and then may be inactivated by a membrane-bound proteinase [].; PDB: 3ISY_A. |
| >PF06525 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus | Back alignment and domain information |
|---|
Probab=89.95 E-value=3 Score=37.53 Aligned_cols=96 Identities=16% Similarity=0.108 Sum_probs=60.1
Q ss_pred eEEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcc----ccccCC--CCCCCccceEEeCCCcE
Q 012467 329 GVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKE----DEKKFN--LKNPPLKNTAVIFPYGW 402 (463)
Q Consensus 329 ~~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~----~~~~~n--~~~p~~rDTv~v~~~g~ 402 (463)
..+.++.|-.|.+++.|.+.+ .| .|-|+..+....+.. |.+-+. ...+.--..--+.+|..
T Consensus 86 m~i~VPAGw~V~i~f~N~~~l------~H-------nl~iv~~~~~~p~~~~i~~DgkIl~~~G~s~~~~~~~GI~~G~s 152 (196)
T PF06525_consen 86 MTIYVPAGWNVQITFTNQESL------PH-------NLVIVQNDTPTPNNPPISSDGKILLYVGASPGNYTSNGISSGQS 152 (196)
T ss_pred EEEEEcCCCEEEEEEEcCCCC------Ce-------eEEEEeCCCCCCCccccCCCCceeeeccCCCCccccCCccCCce
Confidence 358899999999999998876 55 466775432211110 111000 00000000112335566
Q ss_pred EEEEEEcCCceeeeecccchHhHHccceeeeeccc
Q 012467 403 TALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGV 437 (463)
Q Consensus 403 ~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~ 437 (463)
...-+..-.||.+.|=|-+.-|...||-..+.+..
T Consensus 153 ~~~~~~~l~aG~YwlvC~ipGHA~sGMw~~LiVs~ 187 (196)
T PF06525_consen 153 ASGVYNDLPAGYYWLVCGIPGHAESGMWGVLIVSS 187 (196)
T ss_pred eeEEEccCCCceEEEEccCCChhhcCCEEEEEEec
Confidence 65556666799999999999999999999997654
|
The most closely related proteins characterised as functionally different are the rusticyanins. |
| >PF06525 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus | Back alignment and domain information |
|---|
Probab=89.51 E-value=1.4 Score=39.54 Aligned_cols=73 Identities=21% Similarity=0.319 Sum_probs=48.6
Q ss_pred eEEEecCCCeEEEEEEecCcceEEEEEEe--Cc---eeEEEEeCCcccc-----eeeEeeEEecCCceEEEEEecCCCCC
Q 012467 116 QILHVQPNKTYRLRIASTTALASLNLAVK--NH---KMVVVEADGNYVQ-----PFEVDDMDIYSGESYSVLLTTNQDPS 185 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~--~h---~~~via~DG~~v~-----P~~~~~l~i~~GeR~dvlV~~~~~~~ 185 (463)
.+|.|.+|-++.++++|.+.. .+.|-|- +. ..-.|..||..+. +-....--|.+||++..+.... ++
T Consensus 86 m~i~VPAGw~V~i~f~N~~~l-~Hnl~iv~~~~~~p~~~~i~~DgkIl~~~G~s~~~~~~~GI~~G~s~~~~~~~l--~a 162 (196)
T PF06525_consen 86 MTIYVPAGWNVQITFTNQESL-PHNLVIVQNDTPTPNNPPISSDGKILLYVGASPGNYTSNGISSGQSASGVYNDL--PA 162 (196)
T ss_pred EEEEEcCCCEEEEEEEcCCCC-CeeEEEEeCCCCCCCccccCCCCceeeeccCCCCccccCCccCCceeeEEEccC--CC
Confidence 589999999999999998754 4444442 21 2346778886551 2222233567999998776433 36
Q ss_pred CceEEE
Q 012467 186 YNYWIS 191 (463)
Q Consensus 186 g~y~ir 191 (463)
|.|||.
T Consensus 163 G~Ywlv 168 (196)
T PF06525_consen 163 GYYWLV 168 (196)
T ss_pred ceEEEE
Confidence 999995
|
The most closely related proteins characterised as functionally different are the rusticyanins. |
| >TIGR02656 cyanin_plasto plastocyanin | Back alignment and domain information |
|---|
Probab=88.28 E-value=1.4 Score=35.12 Aligned_cols=67 Identities=16% Similarity=0.210 Sum_probs=38.2
Q ss_pred ceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccce-eeEeeEEecCCceEEEEEecCCCCCCceEEE
Q 012467 115 PQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQP-FEVDDMDIYSGESYSVLLTTNQDPSYNYWIS 191 (463)
Q Consensus 115 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P-~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir 191 (463)
|..|+|++|++++|. |.+. ..+.+.++...+..-+ ....+ ...+.+.+.||+++++-++. +|.|...
T Consensus 16 P~~i~v~~G~~V~~~--N~~~-~~H~~~~~~~~~~~~~---~~~~~~~~~~~~~~~pG~t~~~tF~~----~G~y~y~ 83 (99)
T TIGR02656 16 PAKISIAAGDTVEWV--NNKG-GPHNVVFDEDAVPAGV---KELAKSLSHKDLLNSPGESYEVTFST----PGTYTFY 83 (99)
T ss_pred CCEEEECCCCEEEEE--ECCC-CCceEEECCCCCccch---hhhcccccccccccCCCCEEEEEeCC----CEEEEEE
Confidence 457999999987665 7653 3344444322111000 00111 12255789999999995553 5788765
|
Members of this family are plastocyanin, a blue copper protein related to pseudoazurin, halocyanin, amicyanin, etc. This protein, located in the thylakoid luman, performs electron transport to photosystem I in Cyanobacteria and chloroplasts. |
| >TIGR03094 sulfo_cyanin sulfocyanin | Back alignment and domain information |
|---|
Probab=87.83 E-value=5.4 Score=35.28 Aligned_cols=97 Identities=16% Similarity=0.097 Sum_probs=59.8
Q ss_pred ceEEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCC-cc---ccccCCCC--CCCccceEEeCCCc
Q 012467 328 SGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFT-KE---DEKKFNLK--NPPLKNTAVIFPYG 401 (463)
Q Consensus 328 ~~~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~-~~---~~~~~n~~--~p~~rDTv~v~~~g 401 (463)
...+-++.|-.|.++|.|.+.+ .|. +-++..+....+ +. |.+.++.. .+..-..=-+..|.
T Consensus 84 ~mtIyiPaGw~V~V~f~N~e~~------pHn-------l~iv~n~t~~P~~~~~s~dgkil~~vG~~~s~~~~NGi~~Gq 150 (195)
T TIGR03094 84 AMTIYLPAGWNVYVTFTNYESL------PHN-------LKLLPNSTQTPRGPIWAHTGKIINSTGATTSIYYGNGISSGH 150 (195)
T ss_pred ceEEEEeCCCEEEEEEEcCCCC------Ccc-------EEEecCCCCCCCccccccCceeEeecccccCccccccccccc
Confidence 3458899999999999999866 554 555554321111 00 11111110 00000111123455
Q ss_pred EEEEEEEcCCceeeeecccchHhHHccceeeeeccc
Q 012467 402 WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGV 437 (463)
Q Consensus 402 ~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~ 437 (463)
.....+..-.||.+.+=|-+.-|...||-..+.+..
T Consensus 151 s~sg~~~~~~~G~YwlvCgipGHAesGMw~~lIVSs 186 (195)
T TIGR03094 151 SRSGWWNDTSAGKYWLVCGITGHAESGMWAVVIVSS 186 (195)
T ss_pred eeEEEeccCCCeeEEEEcccCChhhcCcEEEEEEec
Confidence 656667777899999999999999999998887654
|
Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus. The most closely related proteins characterized as functionally different are the rustacyanins. |
| >COG3794 PetE Plastocyanin [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=87.36 E-value=2.9 Score=35.07 Aligned_cols=72 Identities=21% Similarity=0.237 Sum_probs=46.5
Q ss_pred EEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcC
Q 012467 331 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 410 (463)
Q Consensus 331 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~ad 410 (463)
++++.|++|+|+ |.+.. .|-.+. .+...+ -.-+++....+.....-|..
T Consensus 56 v~v~pGDTVtw~--~~d~~------~Hnv~~---------~~~~~~-------------~g~~~~~~~~~~s~~~Tfe~- 104 (128)
T COG3794 56 VTVKPGDTVTWV--NTDSV------GHNVTA---------VGGMDP-------------EGSGTLKAGINESFTHTFET- 104 (128)
T ss_pred EEECCCCEEEEE--ECCCC------CceEEE---------eCCCCc-------------ccccccccCCCcceEEEecc-
Confidence 899999999997 44443 565432 222111 11223333334666655554
Q ss_pred CceeeeecccchHhHHccceeeeecc
Q 012467 411 NPGAWAFHCHIEPHFHIGMGVVLALG 436 (463)
Q Consensus 411 npG~w~~HCHi~~H~~~GM~~~~~~~ 436 (463)
||.+.|.|- .|..+||-+.+.++
T Consensus 105 -~G~Y~Y~C~--PH~~~gM~G~IvV~ 127 (128)
T COG3794 105 -PGEYTYYCT--PHPGMGMKGKIVVG 127 (128)
T ss_pred -cceEEEEec--cCCCCCcEEEEEeC
Confidence 999999997 79999999888764
|
|
| >TIGR02866 CoxB cytochrome c oxidase, subunit II | Back alignment and domain information |
|---|
Probab=87.28 E-value=2.4 Score=38.74 Aligned_cols=69 Identities=28% Similarity=0.380 Sum_probs=50.4
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.+.++.|+.|++.+.+.+.. |. |+|-+.+ .. ..+.||....+.|++
T Consensus 118 ~l~vp~g~~v~~~~ts~DV~-------Hs-------f~ip~~~-----------------~k---~da~PG~~~~~~~~~ 163 (201)
T TIGR02866 118 ELVVPAGTPVRLQVTSKDVI-------HS-------FWVPELG-----------------GK---IDAIPGQYNALWFNA 163 (201)
T ss_pred EEEEEcCCEEEEEEEeCchh-------hc-------ccccccC-----------------ce---EEecCCcEEEEEEEe
Confidence 38899999999999987753 54 5553321 12 234578999999999
Q ss_pred CCceeeeecccc---hHhHHccceeeee
Q 012467 410 DNPGAWAFHCHI---EPHFHIGMGVVLA 434 (463)
Q Consensus 410 dnpG~w~~HCHi---~~H~~~GM~~~~~ 434 (463)
+.||.+...|.. ..| ..|...+.
T Consensus 164 ~~~G~y~~~c~e~cG~~h--~~M~~~v~ 189 (201)
T TIGR02866 164 DEPGVYYGYCAELCGAGH--SLMLFKVV 189 (201)
T ss_pred CCCEEEEEEehhhCCcCc--cCCeEEEE
Confidence 999999999997 445 45665554
|
Cytochrome c oxidase is the terminal electron acceptor of mitochondria (and one of several possible acceptors in prokaryotes) in the electron transport chain of aerobic respiration. The enzyme couples the oxidation of reduced cytochrome c with the reduction of molecular oxygen to water. This process results in the pumping of four protons across the membrane which are used in the proton gradient powered synthesis of ATP. The oxidase contains two heme a cofactors and three copper atoms as well as other bound ions. |
| >COG4454 Uncharacterized copper-binding protein [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=87.02 E-value=1.4 Score=37.84 Aligned_cols=74 Identities=15% Similarity=0.255 Sum_probs=51.4
Q ss_pred ceEEEecCCCeEEEEEEecCcceEEEEEEe------CceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCce
Q 012467 115 PQILHVQPNKTYRLRIASTTALASLNLAVK------NHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNY 188 (463)
Q Consensus 115 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~------~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y 188 (463)
+..+.++.|+++|+-+-|.+-.. +.|.++ +|.-..+.+| ..+--..+.+.|.||+.-.++|.+.+ +|.|
T Consensus 62 p~~~~v~aG~tv~~v~~n~~el~-hef~~~~~~~~~~~~~~~~~~~--Dme~d~~~~v~L~PG~s~elvv~ft~--~g~y 136 (158)
T COG4454 62 PSSFEVKAGETVRFVLKNEGELK-HEFTMDAPDKNLEHVTHMILAD--DMEHDDPNTVTLAPGKSGELVVVFTG--AGKY 136 (158)
T ss_pred CCcccccCCcEEeeeecCcccce-EEEeccCccccchhHHHhhhCC--ccccCCcceeEeCCCCcEEEEEEecC--CccE
Confidence 34689999999999999988543 344443 2222233333 22234567899999999999999986 5899
Q ss_pred EEEEE
Q 012467 189 WISAG 193 (463)
Q Consensus 189 ~ir~~ 193 (463)
.++-.
T Consensus 137 e~~C~ 141 (158)
T COG4454 137 EFACN 141 (158)
T ss_pred EEEec
Confidence 88643
|
|
| >TIGR02375 pseudoazurin pseudoazurin | Back alignment and domain information |
|---|
Probab=82.67 E-value=1.2 Score=36.85 Aligned_cols=33 Identities=15% Similarity=0.113 Sum_probs=27.8
Q ss_pred cccccccceeEEEeccchhhhhcceeeEEEEeCCC
Q 012467 2 LDVWQVQAGTYFYHGHLGMQRSAGLYGSLIVDVAD 36 (463)
Q Consensus 2 ~~~~~~~~GT~WYHsH~~~q~~~Gl~G~lIV~~~~ 36 (463)
|++...++|+|=|+|= .+...||.|.|+|.+++
T Consensus 58 ~~~tF~~~G~Y~Y~C~--pH~~~GM~G~V~Vg~~~ 90 (116)
T TIGR02375 58 YTVTVTEEGVYGVKCT--PHYGMGMVALIQVGDPP 90 (116)
T ss_pred EEEEeCCCEEEEEEcC--CCccCCCEEEEEECCCC
Confidence 4555678999999997 78889999999998864
|
Pseudoazurin, also called cupredoxin, is a small, blue periplasmic protein with a single bound copper atom. Pseudoazurin is related plastocyanins. Several examples of pseudoazurin are encoded by a neighboring gene for, or have been shown to transfer electrons to, copper-containing nitrite reductases (TIGR02376) of the same species. |
| >PF07705 CARDB: CARDB; InterPro: IPR011635 The APHP (acidic peptide-dependent hydrolases/peptidase) domain is found in a variety of different proteins | Back alignment and domain information |
|---|
Probab=81.91 E-value=22 Score=27.67 Aligned_cols=68 Identities=22% Similarity=0.284 Sum_probs=42.9
Q ss_pred ecCCCeE--EEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeE-EecCCceEEEEEecCCCCCCceEEEEEecC
Q 012467 120 VQPNKTY--RLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDM-DIYSGESYSVLLTTNQDPSYNYWISAGVRG 196 (463)
Q Consensus 120 v~~g~~~--RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l-~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~ 196 (463)
+.+|+.+ .+.+-|.|....-.+.+. +-.||..+ ....| .|.+|+...+-+.......|.|.|++....
T Consensus 15 ~~~g~~~~i~~~V~N~G~~~~~~~~v~------~~~~~~~~---~~~~i~~L~~g~~~~v~~~~~~~~~G~~~i~~~iD~ 85 (101)
T PF07705_consen 15 VVPGEPVTITVTVKNNGTADAENVTVR------LYLDGNSV---STVTIPSLAPGESETVTFTWTPPSPGSYTIRVVIDP 85 (101)
T ss_dssp EETTSEEEEEEEEEE-SSS-BEEEEEE------EEETTEEE---EEEEESEB-TTEEEEEEEEEE-SS-CEEEEEEEEST
T ss_pred ccCCCEEEEEEEEEECCCCCCCCEEEE------EEECCcee---ccEEECCcCCCcEEEEEEEEEeCCCCeEEEEEEEee
Confidence 4566665 677899987654444433 45566665 34445 889999999888876545789999887643
|
; PDB: 2KUT_A 2L0D_A 3IDU_A 2KL6_A. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 463 | ||||
| 1aoz_A | 552 | Refined Crystal Structure Of Ascorbate Oxidase At 1 | 0.0 | ||
| 1hfu_A | 503 | Type-2 Cu-Depleted Laccase From Coprinus Cinereus A | 1e-27 | ||
| 1a65_A | 504 | Type-2 Cu-depleted Laccase From Coprinus Cinereus L | 1e-27 | ||
| 2hrg_A | 496 | Crystal Structure Of Blue Laccase From Trametes Tro | 3e-26 | ||
| 4a2f_A | 497 | Coriolopsis Gallica Laccase Collected At 12.65 Kev | 5e-26 | ||
| 4a2d_A | 496 | Coriolopsis Gallica Laccase T2 Copper Depleted At P | 5e-26 | ||
| 2qt6_A | 498 | Crystal Structure Determination Of A Blue Laccase F | 8e-26 | ||
| 3t6v_A | 495 | Crystal Structure Of Laccase From Steccherinum Ochr | 9e-26 | ||
| 3kw7_A | 502 | Crystal Structure Of Lacb From Trametes Sp. Ah28-2 | 9e-26 | ||
| 1gyc_A | 499 | Crystal Structure Determination At Room Temperature | 2e-25 | ||
| 2xyb_A | 497 | Crystal Structure Of A Fully Functional Laccase Fro | 3e-24 | ||
| 1v10_A | 521 | Structure Of Rigidoporus Lignosus Laccase From Hemi | 4e-24 | ||
| 1zpu_A | 534 | Crystal Structure Of Fet3p, A Multicopper Oxidase T | 1e-21 | ||
| 2hzh_A | 499 | Crystal Structure Of Laccase From Coriolus Zonatus | 6e-21 | ||
| 3fpx_A | 499 | Native Fungus Laccase From Trametes Hirsuta Length | 7e-21 | ||
| 3pxl_A | 499 | Type-2 Cu-Depleted Fungus Laccase From Trametes Hir | 1e-20 | ||
| 1kya_A | 499 | Active Laccase From Trametes Versicolor Complexed W | 2e-20 | ||
| 3div_A | 499 | Crystal Structure Of Laccase From Cerrena Maxima At | 4e-19 | ||
| 2h5u_A | 499 | Crystal Structure Of Laccase From Cerrena Maxima At | 5e-16 | ||
| 2q9o_A | 559 | Near-Atomic Resolution Structure Of A Melanocarpus | 8e-15 | ||
| 1gw0_A | 559 | Crystal Structure Of Laccase From Melanocarpus Albo | 9e-15 | ||
| 3dkh_A | 559 | L559a Mutant Of Melanocarpus Albomyces Laccase Leng | 9e-15 | ||
| 3pps_A | 604 | Crystal Structure Of An Ascomycete Fungal Laccase F | 2e-14 | ||
| 3v9e_A | 580 | Structure Of The L513m Mutant Of The Laccase From B | 1e-10 | ||
| 3v9e_A | 580 | Structure Of The L513m Mutant Of The Laccase From B | 3e-07 | ||
| 3sqr_A | 580 | Crystal Structure Of Laccase From Botrytis Aclada A | 1e-10 | ||
| 3sqr_A | 580 | Crystal Structure Of Laccase From Botrytis Aclada A | 7e-07 | ||
| 1kcw_A | 1046 | X-Ray Crystal Structure Of Human Ceruloplasmin At 3 | 7e-04 | ||
| 2j5w_A | 1065 | Ceruloplasmin Revisited: Structural And Functional | 7e-04 |
| >pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9 Angstroms Resolution Length = 552 | Back alignment and structure |
|
| >pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68 A Resolution Length = 503 | Back alignment and structure |
|
| >pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus Length = 504 | Back alignment and structure |
|
| >pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii Complexed With P-Methylbenzoate Length = 496 | Back alignment and structure |
|
| >pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev Length = 497 | Back alignment and structure |
|
| >pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5 Length = 496 | Back alignment and structure |
|
| >pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From Lentinus Tigrinus Length = 498 | Back alignment and structure |
|
| >pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum Length = 495 | Back alignment and structure |
|
| >pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2 Length = 502 | Back alignment and structure |
|
| >pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A Laccase From Trametes Versicolor In Its Oxidised Form Containing A Full Complement Of Copper Ions Length = 499 | Back alignment and structure |
|
| >pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The Ligninolytic Fungus Pycnoporus Cinnabarinus Length = 497 | Back alignment and structure |
|
| >pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From Hemihedrally Twinned Crystals Length = 521 | Back alignment and structure |
|
| >pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That Functions In Iron Import Length = 534 | Back alignment and structure |
|
| >pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6 A Resolution Length = 499 | Back alignment and structure |
|
| >pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta Length = 499 | Back alignment and structure |
|
| >pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta Length = 499 | Back alignment and structure |
|
| >pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With 2,5-Xylidine Length = 499 | Back alignment and structure |
|
| >pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a Resolution Length = 499 | Back alignment and structure |
|
| >pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a Resolution Length = 499 | Back alignment and structure |
|
| >pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus Albomyces Laccase Length = 559 | Back alignment and structure |
|
| >pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces In Four Copper Form Length = 559 | Back alignment and structure |
|
| >pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase Length = 559 | Back alignment and structure |
|
| >pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From Thielavia Arenaria Length = 604 | Back alignment and structure |
|
| >pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada Length = 580 | Back alignment and structure |
|
| >pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada Length = 580 | Back alignment and structure |
|
| >pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67 A Resolution Length = 580 | Back alignment and structure |
|
| >pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67 A Resolution Length = 580 | Back alignment and structure |
|
| >pdb|1KCW|A Chain A, X-Ray Crystal Structure Of Human Ceruloplasmin At 3.0 Angstroms Length = 1046 | Back alignment and structure |
|
| >pdb|2J5W|A Chain A, Ceruloplasmin Revisited: Structural And Functional Roles Of Various Metal Cation Binding Sites Length = 1065 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 463 | |||
| 1aoz_A | 552 | Ascorbate oxidase; oxidoreductase(oxygen acceptor) | 0.0 | |
| 1zpu_A | 534 | Iron transport multicopper oxidase FET3; ferroxida | 1e-128 | |
| 3pxl_A | 499 | Laccase; 4-copper protein, metal-binding, oxidored | 1e-123 | |
| 1v10_A | 521 | Laccase; multicopper blue oxidase, oxidase; 1.7A { | 1e-123 | |
| 3t6v_A | 495 | Laccase; beta barrel, oxidoreductase; HET: CBS; 2. | 1e-123 | |
| 1hfu_A | 503 | Laccase 1; oxidoreductase, blue multi-copper oxida | 1e-120 | |
| 3sqr_A | 580 | Laccase; multicopper oxidase, glycosylation, oxido | 1e-118 | |
| 2q9o_A | 559 | Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct | 1e-118 | |
| 2xu9_A | 439 | Laccase; oxidoreductase, multicopper oxidases; 1.5 | 3e-42 | |
| 3zx1_A | 481 | Oxidoreductase, putative; laccase, metallo-oxidase | 9e-40 | |
| 3abg_A | 534 | Bilirubin oxidase; cleavage on PAIR of basic resid | 1e-33 | |
| 3aw5_A | 448 | Multicopper oxidase; beta barrel, oxidoreductase; | 2e-33 | |
| 3g5w_A | 318 | Multicopper oxidase type 1; two domain, laccase, n | 2e-32 | |
| 3g5w_A | 318 | Multicopper oxidase type 1; two domain, laccase, n | 3e-08 | |
| 2zwn_A | 339 | Two-domain type laccase; muticopper oxidase, oxido | 7e-31 | |
| 2zwn_A | 339 | Two-domain type laccase; muticopper oxidase, oxido | 2e-06 | |
| 3od3_A | 488 | Blue copper oxidase CUEO; multicopper oxidase, Cu( | 5e-29 | |
| 2wsd_A | 513 | Spore coat protein A; oxidoreductase, multi-copper | 1e-25 | |
| 2g23_A | 612 | PHS, phenoxazinone synthase; copper, metalloprotei | 2e-25 | |
| 2uxt_A | 451 | Protein SUFI, SUFI; oxidoreductase, periplasmic, c | 1e-24 | |
| 3gdc_A | 288 | Multicopper oxidase; beta sandwich, plasmid, oxido | 4e-13 | |
| 3gdc_A | 288 | Multicopper oxidase; beta sandwich, plasmid, oxido | 5e-11 | |
| 2zoo_A | 442 | Probable nitrite reductase; electron transfer, ele | 1e-12 | |
| 2zoo_A | 442 | Probable nitrite reductase; electron transfer, ele | 1e-08 | |
| 1sdd_A | 306 | Coagulation factor V; copper-binding protein, cofa | 2e-12 | |
| 1sdd_A | 306 | Coagulation factor V; copper-binding protein, cofa | 4e-06 | |
| 2j5w_A | 1065 | Ceruloplasmin, ferroxidase; oxidoreductase, plasma | 3e-12 | |
| 2j5w_A | 1065 | Ceruloplasmin, ferroxidase; oxidoreductase, plasma | 7e-12 | |
| 2j5w_A | 1065 | Ceruloplasmin, ferroxidase; oxidoreductase, plasma | 2e-08 | |
| 2j5w_A | 1065 | Ceruloplasmin, ferroxidase; oxidoreductase, plasma | 1e-06 | |
| 3kw8_A | 276 | Laccase, putative copper oxidase; two-domain lacca | 7e-12 | |
| 3kw8_A | 276 | Laccase, putative copper oxidase; two-domain lacca | 1e-04 | |
| 3cg8_A | 343 | Laccase; oxidoreductase, multicopper blue protein; | 4e-11 | |
| 3cg8_A | 343 | Laccase; oxidoreductase, multicopper blue protein; | 2e-05 | |
| 2r7e_A | 742 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 1e-10 | |
| 2r7e_A | 742 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 2e-09 | |
| 2r7e_A | 742 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 2e-04 | |
| 2dv6_A | 447 | Nitrite reductase; electron transfer, reduction, d | 7e-09 | |
| 2dv6_A | 447 | Nitrite reductase; electron transfer, reduction, d | 5e-04 | |
| 1kbv_A | 327 | ANIA, major outer membrane protein PAN 1; ANIA[NO2 | 2e-08 | |
| 1kbv_A | 327 | ANIA, major outer membrane protein PAN 1; ANIA[NO2 | 2e-07 | |
| 1oe1_A | 336 | Dissimilatory copper-containing nitrite reductase; | 2e-07 | |
| 1oe1_A | 336 | Dissimilatory copper-containing nitrite reductase; | 3e-05 | |
| 1mzy_A | 333 | Copper-containing nitrite reductase; mutant M182T, | 4e-05 | |
| 2bw4_A | 340 | Copper-containing nitrite reductase; oxidoreductas | 9e-05 | |
| 2bw4_A | 340 | Copper-containing nitrite reductase; oxidoreductas | 2e-04 | |
| 1sdd_B | 647 | Coagulation factor V; copper-binding protein, cofa | 2e-04 |
| >1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* Length = 552 | Back alignment and structure |
|---|
Score = 567 bits (1464), Expect = 0.0
Identities = 318/460 (69%), Positives = 373/460 (81%), Gaps = 2/460 (0%)
Query: 5 WQV-QAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQ 63
+ V GT+FYHGHLGMQRSAGLYGSLIVD G+KEPFHYDGE NLLLSDWWH+S+H+Q
Sbjct: 93 FTVDNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPFHYDGEINLLLSDWWHQSIHKQ 152
Query: 64 EVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPN 123
EVGLSS+P+RWIGEPQT+L+NGRGQF+CS+AA + + + E CKL+G+E CAP I HV P
Sbjct: 153 EVGLSSKPIRWIGEPQTILLNGRGQFDCSIAAKY-DSNLEPCKLKGSESCAPYIFHVSPK 211
Query: 124 KTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQD 183
KTYR+RIASTTALA+LN A+ NH+++VVEADGNYVQPF D+DIYSGESYSVL+TT+Q+
Sbjct: 212 KTYRIRIASTTALAALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQN 271
Query: 184 PSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIF 243
PS NYW+S G R R P TPP LTLLNY P S SK+P SPPP TP WDD+D SK+F+ +I
Sbjct: 272 PSENYWVSVGTRARHPNTPPGLTLLNYLPNSVSKLPTSPPPQTPAWDDFDRSKNFTYRIT 331
Query: 244 ALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQN 303
A MGSPKPP F+RR+ LLNTQN ING+ KWAIN+VSL LPPTPYLG++KY L AFDQN
Sbjct: 332 AAMGSPKPPVKFNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQN 391
Query: 304 GPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHG 363
PPE F +YD+ PP N T +G+GVY + VDVILQNAN ++ NLSE HPWHLHG
Sbjct: 392 PPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHG 451
Query: 364 HDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEP 423
HDFWVLG G+GKF+ E+E NLKNPPL+NT VIFPYGWTA+RFVADNPG WAFHCHIEP
Sbjct: 452 HDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEP 511
Query: 424 HFHIGMGVVLALGVETVGNIPNQALACGLTGKRFMNPKQN 463
H H+GMGVV A GVE VG IP +ALACG T K +N +N
Sbjct: 512 HLHMGMGVVFAEGVEKVGRIPTKALACGGTAKSLINNPKN 551
|
| >1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} Length = 534 | Back alignment and structure |
|---|
Score = 382 bits (982), Expect = e-128
Identities = 106/454 (23%), Positives = 166/454 (36%), Gaps = 72/454 (15%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGL 67
GTY+YH H Q G+ G I+ + P+ YD E +L LS+W+H V +
Sbjct: 98 NVGTYWYHSHTDGQYEDGMKGLFIIK---DDSFPYDYDEELSLSLSEWYHDLVTDLTKSF 154
Query: 68 SSR--PLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKT 125
S P PQ L++N VQP+ T
Sbjct: 155 MSVYNPTGAEPIPQNLIVNNTMNLTWE---------------------------VQPDTT 187
Query: 126 YRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPS 185
Y LRI + S +++H+M VVE DG + D + I + Y+VL+ T D
Sbjct: 188 YLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTDMLYITVAQRYTVLVHTKNDTD 247
Query: 186 YNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFAL 245
N+ I P+ + + S + + P + D +F + +
Sbjct: 248 KNFAIMQKFDDTMLDVIPS----DLQLNATSYMVYNKTAALPTQNYVDSIDNFLDDFYLQ 303
Query: 246 -MGSPKPPTNFHRRLTL-LNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQN 303
+T+ + N NG NN++ T P P L ++ A +
Sbjct: 304 PYEKEAIYGEPDHVITVDVVMDNLKNGVNYAFFNNITYTAPKVPTLMTVLSSGDQANNSE 363
Query: 304 GPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHG 363
N + ++L + V+++L N + HP+HLHG
Sbjct: 364 IYGSN-------------------THTFILEKDEIVEIVLNNQDT------GTHPFHLHG 398
Query: 364 HDFWVLGRGEGKFTKE---------DEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGA 414
H F + R D + P ++T + P +RF ADNPG
Sbjct: 399 HAFQTIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSNFVIRFKADNPGV 458
Query: 415 WAFHCHIEPHFHIGMGVVLALGVETVGNIPNQAL 448
W FHCHIE H G+G+VL + + +Q L
Sbjct: 459 WFFHCHIEWHLLQGLGLVLVEDPFGIQDAHSQQL 492
|
| >3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* Length = 499 | Back alignment and structure |
|---|
Score = 367 bits (943), Expect = e-123
Identities = 107/445 (24%), Positives = 164/445 (36%), Gaps = 76/445 (17%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIV-DVADGEKEPFHYD-GEFNLLLSDWWHRSVHEQEV 65
QAGT++YH HL Q GL G +V D D + D + + L+DW+H +
Sbjct: 102 QAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWYHTA------ 155
Query: 66 GLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKT 125
+ R+ G LING+G+ A S + V K
Sbjct: 156 --AKLGPRFPGGADATLINGKGRAPSDSVAELSV------------------IKVTKGKR 195
Query: 126 YRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPS 185
YR R+ S + + ++ H + ++E D QP EVD + I++ + YS +L NQ
Sbjct: 196 YRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAAQRYSFVLDANQAVD 255
Query: 186 YNYWISAGVRGRKPATPPALTL--LNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIF 243
NYWI A + L Y A + + ++ D +
Sbjct: 256 -NYWIRANPNFGNVGFDGGINSAILRYDGAPAVEPTTNQTTSVKPLNEVD--------LH 306
Query: 244 ALMGSPKPPTNFHRRLTL-LNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQ 302
L+ +P P + +N NG + + IN S P P L I G + A D
Sbjct: 307 PLVSTPVPGAPSSGGVDKAINMAFNFNG-SNFFINGASFVPPTVPVLLQILSGAQTAQD- 364
Query: 303 NGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLH 362
+ + VY+L N ++++ A HP+HLH
Sbjct: 365 ---------------LLPSGS------VYVLPSNASIEISFPATAAAPG---APHPFHLH 400
Query: 363 GHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIF---PYGWTALRFVADNPGAWAFHC 419
GH F V+ +N NP ++ +RF +NPG W HC
Sbjct: 401 GHTFAVVRSA-------GSTVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTNNPGPWFLHC 453
Query: 420 HIEPHFHIGMGVVLALGVETVGNIP 444
HI+ H G VV+A V +
Sbjct: 454 HIDFHLEGGFAVVMAEDTPDVKAVN 478
|
| >1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 Length = 521 | Back alignment and structure |
|---|
Score = 367 bits (945), Expect = e-123
Identities = 114/448 (25%), Positives = 166/448 (37%), Gaps = 74/448 (16%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIV-DVADGEKEPFHYD-GEFNLLLSDWWHRSVHEQEV 65
QAGTY+YH HL Q GL G+ +V D D + D + ++DW+H
Sbjct: 123 QAGTYWYHSHLSTQYCDGLRGAFVVYDPNDPHLSLYDVDDASTVITIADWYHSLSTV--- 179
Query: 66 GLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKT 125
L P + P T LING G+ + + +A ++ VQ K
Sbjct: 180 -LFPNPNKAPPAPDTTLINGLGRNSANPSAG-----------------QLAVVSVQSGKR 221
Query: 126 YRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPS 185
YR RI ST+ + ++ H+M V+E DG QP VD + I++G+ YSV++ NQ
Sbjct: 222 YRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQAVG 281
Query: 186 YNYWISAGVRGRKPATPPALT--LLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIF 243
NYWI A + + + Y + ++ S T +
Sbjct: 282 -NYWIRANPSNGRNGFTGGINSAIFRYQGAAVAEPTTSQNSGTALNEANLIP-------L 333
Query: 244 ALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQN 303
G+P P + L + IN P P L I G+ + D
Sbjct: 334 INPGAPGNPVPGGADINLNLRIGRNATTADFTINGAPFIPPTVPVLLQILSGVTNPND-- 391
Query: 304 GPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHG 363
G V L N +++ + HP+HLHG
Sbjct: 392 --------------------LLPGGAVISLPANQVIEISIPGGGN--------HPFHLHG 423
Query: 364 HDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYG-WTALRFVADNPGAWAFHCHIE 422
H+F V+ +N NP ++ I G RFV DNPG W HCHI+
Sbjct: 424 HNFDVVRTP-------GSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFLHCHID 476
Query: 423 PHFHIGMGVVLALGVETVGNIPNQALAC 450
H G+ VV E + NIP
Sbjct: 477 WHLEAGLAVVF---AEDIPNIPIANAIS 501
|
| >3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* Length = 495 | Back alignment and structure |
|---|
Score = 365 bits (940), Expect = e-123
Identities = 107/442 (24%), Positives = 159/442 (35%), Gaps = 70/442 (15%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIV-DVADGEKEPFHYD-GEFNLLLSDWWHRSVHEQEV 65
AGTY+YH HL Q GL G +V D D + + D + L+DW+H E
Sbjct: 103 MAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDVDDDTTIITLADWYHVLAKEMGA 162
Query: 66 GLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKT 125
G + + LI+G G+ + ++AA ++ V+ K
Sbjct: 163 GGAITA-------DSTLIDGLGRTHVNVAA-----------------VPLSVITVEVGKR 198
Query: 126 YRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPS 185
YR+R+ S + + + ++ H M ++E DG Q VD++ I++ + YS +L NQ
Sbjct: 199 YRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTVDEIQIFAAQRYSFVLNANQPVG 258
Query: 186 YNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFAL 245
NYWI A + A+ T + +
Sbjct: 259 -NYWIRANPNSGGEGFDGGINSAILRYDGATTADPVTVASTVHTKCLIETDLHP---LSR 314
Query: 246 MGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGP 305
G P P L + + IN VS T P P L I G A D P
Sbjct: 315 NGVPGNPHQGGADCNLNLSLG--FACGNFVINGVSFTPPTVPVLLQICSGANTAADL-LP 371
Query: 306 PENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHD 365
+ V L N+T+++ L A HP+HLHGHD
Sbjct: 372 SGS---------------------VISLPSNSTIEIALPAGAA-----GGPHPFHLHGHD 405
Query: 366 FWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPY-GWTALRFVADNPGAWAFHCHIEPH 424
F V N +P ++ I +RF DNPG W HCHI+ H
Sbjct: 406 FAVSESA-------SNSTSNYDDPIWRDVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWH 458
Query: 425 FHIGMGVVLALGVETVGNIPNQ 446
G +V E + N +
Sbjct: 459 LDAGFAIVF---AEDIPNTASA 477
|
| >1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* Length = 503 | Back alignment and structure |
|---|
Score = 358 bits (921), Expect = e-120
Identities = 112/448 (25%), Positives = 174/448 (38%), Gaps = 82/448 (18%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIV-DVADGEKEPFHYD-GEFNLLLSDWWHRSVHEQEV 65
AGT++YH H G Q GL G +++ D D + D + L+DW+H
Sbjct: 102 HAGTFWYHSHFGTQYCDGLRGPMVIYDDNDPHAALYDEDDENTIITLADWYHIPAPS--- 158
Query: 66 GLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKT 125
++ +P LING+G++ AA S I++V+ K
Sbjct: 159 ------IQGAAQPDATLINGKGRYVGGPAAELS------------------IVNVEQGKK 194
Query: 126 YRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPS 185
YR+R+ S + + ++ H++ ++E DG +P VD + I++G+ YS +L NQ
Sbjct: 195 YRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDANQPVD 254
Query: 186 YNYWISAGVRGRKPATPPALT------LLNYHPTSASKIPLSPPPITPRWDDYDHSKSFS 239
NYWI A + +L Y + + S P + ++ D
Sbjct: 255 -NYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPNPAQLNEADLHALID 313
Query: 240 NKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDA 299
A G P P L Q +G ++ IN + P P L I G + A
Sbjct: 314 P---AAPGIPTPGAADVN----LRFQLGFSG-GRFTINGTAYESPSVPTLLQIMSGAQSA 365
Query: 300 FDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPW 359
D + VY L N V++++ L HP+
Sbjct: 366 ND----------------LLPAGS------VYELPRNQVVELVVPAG-----VLGGPHPF 398
Query: 360 HLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYG-WTALRFVADNPGAWAFH 418
HLHGH F V+ +N NP ++ + G +RFV DNPG W FH
Sbjct: 399 HLHGHAFSVVRSA-------GSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFH 451
Query: 419 CHIEPHFHIGMGVVLALGVETVGNIPNQ 446
CHIE H G+ +V E + N +
Sbjct: 452 CHIEFHLMNGLAIVF---AEDMANTVDA 476
|
| >3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} Length = 580 | Back alignment and structure |
|---|
Score = 357 bits (919), Expect = e-118
Identities = 98/438 (22%), Positives = 154/438 (35%), Gaps = 56/438 (12%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFN-LLLSDWWHRSVHEQEVG 66
Q GT +YH H +Q GL+G LI++ YD + + L DW H SV E
Sbjct: 161 QYGTTWYHSHFSLQYGDGLFGPLIIN----GPATADYDEDVGVIFLQDWAHESVFEI--- 213
Query: 67 LSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTY 126
+ L + L+NG F+CS + + + L Y
Sbjct: 214 WDTARLGAPPALENTLMNGTNTFDCSASTDPNCVGGGK----------KFELTFVEGTKY 263
Query: 127 RLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSY 186
RLR+ + + A+ NH + V+ D + P+ D + I G+ Y V++ N
Sbjct: 264 RLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVPYTTDTLLIGIGQRYDVIVEANAAAD- 322
Query: 187 NYWISAGVRGRKPATPPALTL---LNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIF 243
NYWI A L Y +S + +D +
Sbjct: 323 NYWIRGNWGTTCSTNNEAANATGILRYDSSSIANPTSVGTTPRGTCEDEPVAS------- 375
Query: 244 ALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQN 303
+ L + + W IN+ SL L + F+
Sbjct: 376 --LVPHLALDVGGYSLVDEQVSSAFTNYFTWTINSSSLLLDWSSPT------TLKIFNNE 427
Query: 304 GPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHG 363
N + + N V ++++ HP HLHG
Sbjct: 428 TIFPTEYNVVALEQTNAN--------------EEWVVYVIEDLTG----FGIWHPIHLHG 469
Query: 364 HDFWVLGRGEGKFT-KEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIE 422
HDF+++ + F E KFNL NPP ++ A + G+ A+ F DNPG+W HCHI
Sbjct: 470 HDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSWLLHCHIA 529
Query: 423 PHFHIGMGVVLALGVETV 440
H G+ + ++
Sbjct: 530 WHASEGLAMQFVESQSSI 547
|
| >2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* Length = 559 | Back alignment and structure |
|---|
Score = 355 bits (913), Expect = e-118
Identities = 92/459 (20%), Positives = 158/459 (34%), Gaps = 78/459 (16%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFN-LLLSDWWHRSVHEQEVG 66
Q GT +YH H Q G+ G++ ++ YD + ++D+++R+ +
Sbjct: 131 QYGTSWYHSHFSAQYGNGVVGTIQIN----GPASLPYDIDLGVFPITDYYYRAADDLVHF 186
Query: 67 LSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTY 126
+ + +LING + ++N + + P K +
Sbjct: 187 TQNNAPPF---SDNVLINGTAVNPNTGEGQYAN------------------VTLTPGKRH 225
Query: 127 RLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSY 186
RLRI +T+ +++ NH M V+ AD V VD + + G+ Y V++ ++ P
Sbjct: 226 RLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPD- 284
Query: 187 NYWISAGVRGRKPATPP----ALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKI 242
NYW + G+ + +Y P DH + +
Sbjct: 285 NYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPGG------LPTDEGTPPVDHQCLDTLDV 338
Query: 243 FALMGSPKPPTNFHRRLT---LLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDA 299
++ P +F +R + T W +N + + + +
Sbjct: 339 RPVVPRSVPVNSFVKRPDNTLPVALDLTGTPLFVWKVNGSDINVDWGKPIIDYILTGNTS 398
Query: 300 FDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPW 359
+ + T +I + HP
Sbjct: 399 YPVSDNIVQVDAVD----------------------QWTYWLIENDPEGPFS---LPHPM 433
Query: 360 HLHGHDFWVLGRGEGKFT----------KEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409
HLHGHDF VLGR D + N NPP ++T ++ GW L F
Sbjct: 434 HLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRT 493
Query: 410 DNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQAL 448
DNPGAW FHCHI H G+ V +E ++ +
Sbjct: 494 DNPGAWLFHCHIAWHVSGGLSVDF---LERPADLRQRIS 529
|
| >2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A Length = 439 | Back alignment and structure |
|---|
Score = 154 bits (391), Expect = 3e-42
Identities = 78/436 (17%), Positives = 131/436 (30%), Gaps = 104/436 (23%)
Query: 3 DVWQVQAGTYFYHGHL----GMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHR 58
V + AGT++YH HL Q AGL G+L+V+ + E L+L D +
Sbjct: 100 TVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDAIPELREAEEHLLVLKDLALQ 159
Query: 59 SVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQIL 118
G+ +L+NG + P +
Sbjct: 160 GGRPAPHTPMDWMNGKEGD--LVLVNGALR--------------------------PTL- 190
Query: 119 HVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYV-QPFEVDDMDIYSGESYSVL 177
V T RLR+ + + LA+++H + ++ ADG ++ +P EV ++ + GE VL
Sbjct: 191 -VAQKATLRLRLLNASNARYYRLALQDHPLYLIAADGGFLEEPLEVSELLLAPGERAEVL 249
Query: 178 LTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKS 237
+ ++ + + A R + + + P + + +
Sbjct: 250 VRLRKEG--RFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPKPLPLP 307
Query: 238 FSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLK 297
+ F + +P ++ + ING
Sbjct: 308 KALSPFPTLPAPVVTRRLVLTEDMMAARFFING--------------------------- 340
Query: 298 DAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIH 357
FD T ++N + H
Sbjct: 341 QVFDHRRVDL------------------------KGQAQTVEVWEVENQGDM------DH 370
Query: 358 PWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAF 417
P+HLH H F VL G G+ K+ + L G F
Sbjct: 371 PFHLHVHPFQVLSVG-GR---------PFPYRAWKDVVNLKAGEVARLLVPLREKGRTVF 420
Query: 418 HCHIEPHFHIGMGVVL 433
HCHI H GM VL
Sbjct: 421 HCHIVEHEDRGMMGVL 436
|
| >3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} Length = 481 | Back alignment and structure |
|---|
Score = 148 bits (375), Expect = 9e-40
Identities = 75/432 (17%), Positives = 138/432 (31%), Gaps = 99/432 (22%)
Query: 3 DVWQVQAGTYFYHGHL----GMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHR 58
++ Q AGTY+YH H Q GL G+ ++ +K+ + E +L++SD
Sbjct: 136 EIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIK---AKKDALSHLKEKDLMISDLRLD 192
Query: 59 SVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQIL 118
Q + E + +LING+ +
Sbjct: 193 ENA-QIPNNNLNDWLNGREGEFVLINGQFK-----------------------------P 222
Query: 119 HVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYV-QPFEVDDMDIYSGESYSVL 177
++ R+RI + TA LNL ++ K ++V DG + + +++ + VL
Sbjct: 223 KIKLATNERIRIYNATAARYLNLRIQGAKFILVGTDGGLIEKTIYKEELFLSPASRVEVL 282
Query: 178 LTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKS 237
+ +D ++ + R + TL + + P + S
Sbjct: 283 IDAPKDGNFKLESAYYDRDKMMVKEEPNTLFLANINLKKENVELPKNLKIF------KPS 336
Query: 238 FSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLK 297
K F + + H + + I + + IN
Sbjct: 337 EEPKEFKEIIMSEDHMQMHGMMGKSEGELKIALASMFLINRK------------------ 378
Query: 298 DAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIH 357
++D + L D I+ N + + H
Sbjct: 379 -SYDLKRIDLS------------------------SKLGVVEDWIVINKSHM------DH 407
Query: 358 PWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAF 417
P+H+HG F ++ + K + L++T + P LR D G +
Sbjct: 408 PFHIHGTQFELISSKL------NGKVQKAEFRALRDTINVRPNEELRLRMKQDFKGLRMY 461
Query: 418 HCHIEPHFHIGM 429
HCHI H +GM
Sbjct: 462 HCHILEHEDLGM 473
|
| >3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* Length = 534 | Back alignment and structure |
|---|
Score = 132 bits (332), Expect = 1e-33
Identities = 63/441 (14%), Positives = 109/441 (24%), Gaps = 119/441 (26%)
Query: 8 QAGTYFYHGHL----GMQRSAGLYGSLIVDVADGEKEPFHYDG-----EFNLLLSDWWHR 58
A T +YH H G G ++ D ++ + + ++L+ +
Sbjct: 127 SARTLWYHDHAMHITAENAYRGQAGLYMLT--DPAEDALNLPSGYGEFDIPMILTSKQYT 184
Query: 59 SVHEQEVGLSSRPLRWIG-EPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQI 117
+ L + + +NG+ P
Sbjct: 185 ANGN----LVTTNGELNSFWGDVIHVNGQ----------------------------PWP 212
Query: 118 LHVQPNKTYRLRIASTTALASLNLAVKNH-------KMVVVEADGNYV-QPFEVDDMDIY 169
+ YR R S L + V+ +D + P + + I
Sbjct: 213 FKNVEPRKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIASDSGLLEHPADTSLLYIS 272
Query: 170 SGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRW 229
E Y V+ + + ++ + + + +
Sbjct: 273 MAERYEVVFDFSDYAGKTIELR--------NLGGSIGGIGTDTDYDNTDKVMRFVVADDT 324
Query: 230 DDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYL 289
D S +N SP T R TING
Sbjct: 325 TQPDTSVVPANLRDVPFPSPTTNTPRQFRFGRTGPTWTINGVA----------------- 367
Query: 290 GSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAI 349
+ ++ + AN +G T L NA
Sbjct: 368 -----------------------FADVQNRLLANVPVG---------TVERWELINAGNG 395
Query: 350 RPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALR-FV 408
HP H+H DF V+ R G + + LK+ + +
Sbjct: 396 WT-----HPIHIHLVDFKVISRTSG----NNARTVMPYESGLKDVVWLGRRETVVVEAHY 446
Query: 409 ADNPGAWAFHCHIEPHFHIGM 429
A PG + FHCH H M
Sbjct: 447 APFPGVYMFHCHNLIHEDHDM 467
|
| >3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} Length = 448 | Back alignment and structure |
|---|
Score = 130 bits (327), Expect = 2e-33
Identities = 73/445 (16%), Positives = 128/445 (28%), Gaps = 112/445 (25%)
Query: 8 QAGTYFYHGHL----GMQRSAGLYGSLIVDVADGEKEPFHYD-GEFNLLLSDWWHRSVHE 62
+AGTY YH H Q G G +IV+ G F Y + L++SD
Sbjct: 96 RAGTYLYHPHPHGLTAKQFYMGQLGLVIVE-DSGSDLGFKYGVNDLPLVISDRRFIG-GA 153
Query: 63 QEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQP 122
+ + +L+NG +
Sbjct: 154 PVYNPTPMEMIAGFLGNAVLVNGV----------------------------KDAVFKLS 185
Query: 123 NKTYRLRIASTTALASLNLAVKNHK-----MVVVEADGNYV-QPFEVDDMDIYSGESYSV 176
+YRLR+ + + L++ M ++ D ++ +P EV + + E V
Sbjct: 186 GGSYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIAVDQGFLARPIEVRALFLAPAERAEV 245
Query: 177 LLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSK 236
++ + Y + TP L +P + +
Sbjct: 246 VVELGEG---VYLLK--------NTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGE 294
Query: 237 SFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGL 296
+ + + P RR L +W IN +
Sbjct: 295 AVPVEALSDPPPEPPKPTRTRRFAL------SLSGMQWTINGM----------------- 331
Query: 297 KDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEI 356
++ P+ + ++ + N A P
Sbjct: 332 --FWN--------------ASNPLFEHVSVE---------GVELWEIVNDKASMP----- 361
Query: 357 HPWHLHGHDFWVLGR----GEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWT--ALRFVAD 410
HP HLHG W++ R + D + + LK+T +I+P + F A
Sbjct: 362 HPMHLHGFPMWIIERKDSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAK 421
Query: 411 NP-GAWAFHCHIEPHFHIGMGVVLA 434
+ FHCH H GM + +A
Sbjct: 422 KRGQLFPFHCHNLEHEDGGMMINIA 446
|
| >3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} Length = 318 | Back alignment and structure |
|---|
Score = 124 bits (314), Expect = 2e-32
Identities = 42/254 (16%), Positives = 74/254 (29%), Gaps = 44/254 (17%)
Query: 8 QAGTYFYHGHLGMQRSA---GLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQE 64
AGT +YH H+ + G++G LIV+ + ++ L+LSDW ++
Sbjct: 96 PAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNPLPIEKTVTKDYILMLSDWVSSWANKPG 155
Query: 65 VGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNK 124
G + IN + + V+
Sbjct: 156 EGGIPGDV-----FDYYTINAKSFPETQ------------------------PIRVKKGD 186
Query: 125 TYRLRIASTTALASLNLAVKNHKMVVVEADGNYV-QPFEVDDMDIYSGESYSVLLTTNQD 183
RLR+ + H + DG + +P + D + I GE Y V+L +
Sbjct: 187 VIRLRLIG-AGDHVHAIHTHGHISQIAFKDGFPLDKPIKGDTVLIGPGERYDVILNMDNP 245
Query: 184 PSYNYW-----ISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSF 238
W + +T + Y P D+ + +S
Sbjct: 246 ---GLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVGIDH-PFYVWKDKKFVPDFYYEESL 301
Query: 239 SNKIFALMGSPKPP 252
K + S
Sbjct: 302 -KKDLGMHNSKVFK 314
|
| >3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} Length = 318 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 3e-08
Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 10/75 (13%)
Query: 356 IHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAW 415
+H H HGH + + +G F L P +T +I P + DNPG W
Sbjct: 199 VHAIHTHGHISQIAFK-DG---------FPLDKPIKGDTVLIGPGERYDVILNMDNPGLW 248
Query: 416 AFHCHIEPHFHIGMG 430
H H++ H G
Sbjct: 249 MIHDHVDTHTTNGDK 263
|
| >2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} Length = 339 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 7e-31
Identities = 35/226 (15%), Positives = 67/226 (29%), Gaps = 42/226 (18%)
Query: 8 QAGTYFYHGHLGMQR---SAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQE 64
+ GT +YH H+ + G++G LIVD + +++S W +
Sbjct: 97 RIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQPLPIEKRVTKDVIMMMSTWESAVADKY- 155
Query: 65 VGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQI--LHVQP 122
+N F+ N + P L V+
Sbjct: 156 ------------GEGGTPMNVADYFSV------------------NAKSFPLTQPLRVKK 185
Query: 123 NKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYV-QPFEVDDMDIYSGESYSVLLTTN 181
++R + H M+V DG + P+ D + + GE Y V++ +
Sbjct: 186 GDVVKIRFFG-AGGGIHAMHSHGHDMLVTHKDGLPLDSPYYADTVLVSPGERYDVIIEAD 244
Query: 182 QDPSYNYW---ISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPP 224
P + + V +T++ Y +
Sbjct: 245 N-PGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGVPVDDWYVWKDK 289
|
| >2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} Length = 339 | Back alignment and structure |
|---|
Score = 48.6 bits (116), Expect = 2e-06
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 10/75 (13%)
Query: 356 IHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAW 415
IH H HGHD V + +G L +P +T ++ P + ADNPG +
Sbjct: 200 IHAMHSHGHDMLVTHK-DG---------LPLDSPYYADTVLVSPGERYDVIIEADNPGRF 249
Query: 416 AFHCHIEPHFHIGMG 430
FH H++ H G
Sbjct: 250 IFHDHVDTHVTAGGK 264
|
| >3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... Length = 488 | Back alignment and structure |
|---|
Score = 118 bits (296), Expect = 5e-29
Identities = 70/441 (15%), Positives = 130/441 (29%), Gaps = 83/441 (18%)
Query: 8 QAGTYFYHGHL----GMQRSAGLYGSLIVDVADGEKEPFHYDG-----EFNLLLSDWWHR 58
A T ++H H G Q + GL G ++++ D E + +++ D
Sbjct: 106 PAATCWFHPHQHGKTGRQVAMGLAGLVVIE--DDEILKLMLPKQWGIDDVPVIVQDKKFS 163
Query: 59 SVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQIL 118
+ + + L TLL NG
Sbjct: 164 ADGQIDYQLDVMTAAVGWFGDTLLTNGA----------------------------IYPQ 195
Query: 119 HVQPNKTYRLRIASTTALASLNLAVKN-HKMVVVEADGNYV-QPFEVDDMDIYSGESYSV 176
H P RLR+ + SLN A + + V+ +DG + +P +V ++ + GE + V
Sbjct: 196 HAAPRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEV 255
Query: 177 LLTTNQDPSY-----NYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDD 231
L+ N + + P + + +++ +P + +
Sbjct: 256 LVEVNDNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPDTLSSLPA---- 311
Query: 232 YDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGS 291
+ + + L P + L + G +
Sbjct: 312 LPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHG 371
Query: 292 IKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRP 351
K+ A NG +D+ KP ++ ++ +
Sbjct: 372 GKFDFHHANKINGQA------FDMNKP-----------MFAAAKGQYERWVISGVGDMML 414
Query: 352 NLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTAL-RFVAD 410
HP+H+HG F +L K+T + L +F D
Sbjct: 415 -----HPFHIHGTQFRILSENGKPPAAHR--------AGWKDTVKVEGNVSEVLVKFNHD 461
Query: 411 NP--GAWAFHCHIEPHFHIGM 429
P A+ HCH+ H GM
Sbjct: 462 APKEHAYMAHCHLLEHEDTGM 482
|
| >2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A Length = 513 | Back alignment and structure |
|---|
Score = 108 bits (271), Expect = 1e-25
Identities = 65/440 (14%), Positives = 112/440 (25%), Gaps = 101/440 (22%)
Query: 8 QAGTYFYHGHL----GMQRSAGLYGSLIV-DVADGEKEPFHYDGEFNLLLSDWWHRSVHE 62
+ +YH H + AGL G+ I+ D + + + + LL++D
Sbjct: 146 RGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEKRLKLPSDEYDVPLLITDRTINE-DG 204
Query: 63 QEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQP 122
S+ P ++ L NG + P +
Sbjct: 205 SLFYPSAPENPSPSLPNPSIVPAF-CGETILV----NG-----------KVWPYL--EVE 246
Query: 123 NKTYRLRIASTTALASLNLAVKN-HKMVVVEADGNYV-QPFEVDDMDIYSGESYSVLLTT 180
+ YR R+ + + + NL++ N + + +DG + + +++ + E Y +++
Sbjct: 247 PRKYRFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDF 306
Query: 181 NQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSN 240
I A G P + P
Sbjct: 307 TAYEG-ESIILANSAGCGGDVNPETDANIMQFRVTKPLAQKDESRKP------------- 352
Query: 241 KIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAF 300
K A S + + R L G +NN
Sbjct: 353 KYLASYPSVQHERIQNIRTLKLAGTQDEYGRPVLLLNNKR-------------------- 392
Query: 301 DQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWH 360
PV +G+ +N T HP H
Sbjct: 393 ---------------WHDPVTETPKVGTTEIWSIINPTRGT---------------HPIH 422
Query: 361 LHGHDFWVLGRGEGKFTKEDEKKFNLKNPP----------LKNTAVIFPYGWTALRFV-A 409
LH F VL R + E P K+T +
Sbjct: 423 LHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFG 482
Query: 410 DNPGAWAFHCHIEPHFHIGM 429
G + +HCH H M
Sbjct: 483 PYSGRYVWHCHALEHEDYDM 502
|
| >2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A Length = 451 | Back alignment and structure |
|---|
Score = 105 bits (262), Expect = 1e-24
Identities = 54/435 (12%), Positives = 102/435 (23%), Gaps = 122/435 (28%)
Query: 8 QAGTYFYHGHL----GMQRSAGLYGSLIVDVADGEKEPFHYDG-----EFNLLLSDWWHR 58
A T +YH + Q GL G +V+ D + +F +++ D
Sbjct: 108 NAATLWYHANTPNRTAQQVYNGLAGMWLVE--DEVSKSLPIPNHYGVDDFPVIIQDKRLD 165
Query: 59 SVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQIL 118
+ E TLL+NG +P +
Sbjct: 166 NFGTPEYNEPGSGGFV---GDTLLVNG--------------------------VQSPYV- 195
Query: 119 HVQPNKTYRLRIASTTALASLNLAVKN-HKMVVVEADGNYV-QPFEVDDMDIYSGESYSV 176
V RLR+ + + L + + + V+ D ++ P V + + GE +
Sbjct: 196 EVSRGW-VRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLPAPVSVKQLSLAPGERREI 254
Query: 177 LLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSK 236
L+ + + S I +S +T R
Sbjct: 255 LVDMSNGDEVSITCGEAASIVDRIRGFF---------EPSSILVSTLVLTLRPTGLLPLV 305
Query: 237 SFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGL 296
+ S + L + R L ING
Sbjct: 306 TDSLPMRLLPTEIMAGSPIRSRDISLGDDPGING-------------------------- 339
Query: 297 KDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEI 356
+D N T ++
Sbjct: 340 -QLWDVNRIDVT------------------------AQQGTWERWTVRADEP-------- 366
Query: 357 HPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRF--VADNPGA 414
+H+ G F + + ++ K+T + + F +
Sbjct: 367 QAFHIEGVMFQIRNV--------NGAMPFPEDRGWKDTVWVDGQVELLVYFGQPSWAHFP 418
Query: 415 WAFHCHIEPHFHIGM 429
+ F+ G
Sbjct: 419 FYFNSQTLEMADRGS 433
|
| >3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} Length = 288 | Back alignment and structure |
|---|
Score = 68.7 bits (168), Expect = 4e-13
Identities = 23/179 (12%), Positives = 48/179 (26%), Gaps = 45/179 (25%)
Query: 8 QAGTYFYHGH---LGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQE 64
GT+ YH H L + GLYG IV+ +G D E ++++ +
Sbjct: 125 PFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGRPP---ADDEMVMVMNGYNT------- 174
Query: 65 VGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNK 124
+ + +NG + V+ ++
Sbjct: 175 --------DGGDDNEFYSVNGL-----------------------PFHFMDFPVKVKQHE 203
Query: 125 TYRLRIASTTALASLN-LAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQ 182
R+ + + +N + + D + G+ + L
Sbjct: 204 LVRIHLINVLEYDPINSFHIHGNFFHYYPTGTMLTPSEYTDTISQVQGQRGILELRFPY 262
|
| >3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} Length = 288 | Back alignment and structure |
|---|
Score = 62.5 bits (152), Expect = 5e-11
Identities = 16/83 (19%), Positives = 25/83 (30%), Gaps = 13/83 (15%)
Query: 347 NAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALR 406
N + + I+ +H+HG+ F G L +T L
Sbjct: 211 NVLEYD--PINSFHIHGNFFHYYPTG-----------TMLTPSEYTDTISQVQGQRGILE 257
Query: 407 FVADNPGAWAFHCHIEPHFHIGM 429
PG + FH H +G
Sbjct: 258 LRFPYPGKFMFHAHKTEFAELGW 280
|
| >2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} Length = 442 | Back alignment and structure |
|---|
Score = 68.8 bits (168), Expect = 1e-12
Identities = 29/179 (16%), Positives = 57/179 (31%), Gaps = 29/179 (16%)
Query: 8 QAGTYFYHGHLGM---QRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQE 64
G Y YH + G+YG ++V+ +G D E+ L+ D++ + +
Sbjct: 117 NPGLYIYHCATAPVGMHIANGMYGLILVEPKEGLAP---VDREYYLVQGDFYTKGEFGEA 173
Query: 65 VGLSSRPLRWIGE-PQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPN 123
+ I E ++ NG ++ ++ L +
Sbjct: 174 GLQPFDMAKAIDEDADYVVFNGS-------VGSTTDENS---------------LTAKVG 211
Query: 124 KTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQ 182
+T RL I + + V V +G ++ V I +G + V
Sbjct: 212 ETVRLYIGNGGPNLVSSFHVIGEIFDTVYVEGGSLKNHNVQTTLIPAGGAAIVEFKVEV 270
|
| >2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} Length = 442 | Back alignment and structure |
|---|
Score = 56.1 bits (135), Expect = 1e-08
Identities = 21/123 (17%), Positives = 36/123 (29%), Gaps = 20/123 (16%)
Query: 338 TVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVI 397
TV + + N + +H+ G F + EG T +I
Sbjct: 213 TVRLYIGNGGPNL-----VSSFHVIGEIFDTVYV-EG----------GSLKNHNVQTTLI 256
Query: 398 FPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACGLTGKRF 457
G + F + PG + H AL + V + ++ G T +
Sbjct: 257 PAGGAAIVEFKVEVPGTFILVDHSIFRAFNKG----ALAMLKVEGPDDHSIFTGKTAENV 312
Query: 458 MNP 460
P
Sbjct: 313 YLP 315
|
| >1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 Length = 306 | Back alignment and structure |
|---|
Score = 66.7 bits (162), Expect = 2e-12
Identities = 12/98 (12%), Positives = 20/98 (20%), Gaps = 23/98 (23%)
Query: 336 NTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTA 395
+ + L ++ H +G N +
Sbjct: 222 HDHISWHLIGMSSGPEL----FSIHFNGQVLEQ-------------------NHHKISAI 258
Query: 396 VIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVL 433
+ T G W I HF GM +
Sbjct: 259 TLVSATSTTANMTVSPEGRWTIASLIPRHFQAGMQAYI 296
|
| >1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 Length = 306 | Back alignment and structure |
|---|
Score = 47.5 bits (112), Expect = 4e-06
Identities = 9/89 (10%), Positives = 28/89 (31%), Gaps = 5/89 (5%)
Query: 5 WQVQAGTYFYHGHLGM--QRSAGLYGSLIVD---VADGEKEPFHYDGEFNLLLSDWWHRS 59
T+ Y+ ++ + ++GL G L++ + ++ + L+ + +
Sbjct: 135 DDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQKMFEKQHVLMFAVFDESK 194
Query: 60 VHEQEVGLSSRPLRWIGEPQTLLINGRGQ 88
Q L ++ +
Sbjct: 195 SWNQTSSLMYTVNGYVNGTMPDITVCAHD 223
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 | Back alignment and structure |
|---|
Score = 68.1 bits (165), Expect = 3e-12
Identities = 25/98 (25%), Positives = 31/98 (31%), Gaps = 20/98 (20%)
Query: 336 NTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTA 395
V+ L N ++H H HGH F RG +
Sbjct: 977 GDEVNWYLMGMG----NEIDLHTVHFHGHSFQYKHRG----------------VYSSDVF 1016
Query: 396 VIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVL 433
IFP + L PG W HCH+ H H GM
Sbjct: 1017 DIFPGTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTY 1054
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 | Back alignment and structure |
|---|
Score = 66.9 bits (162), Expect = 7e-12
Identities = 48/458 (10%), Positives = 109/458 (23%), Gaps = 85/458 (18%)
Query: 8 QAGTYFYHGHLGM--QRSAGLYGSLIVDVAD--GEKEPFHYDGEFNLLLSDWWHRSVHEQ 63
T YH H+ ++GL G LI+ D +++ H D EF ++ S
Sbjct: 173 NCVTRIYHSHIDAPKDIASGLIGPLIICKKDSLDKEKEKHIDREFVVMFSVVDENFSWYL 232
Query: 64 EVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPN 123
E + + + + S+ NG + L +
Sbjct: 233 EDNIKTYCSEPEKVDKDNEDFQQSNRMYSV-----NGYTF---------GSLSGLSMCAE 278
Query: 124 KTYRLRIASTTALASLNLAVKNHKMVVVEADGNYV--QPFEVDDMDIYSGESYSVLLTTN 181
+ + + G + + + +D ++++ + +
Sbjct: 279 DRVKWYLFGMGN---------EVDVHAAFFHGQALTNKNYRIDTINLFPATLFDAYMVAQ 329
Query: 182 QDPSY------NYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHS 235
+ + AG++ + + W+
Sbjct: 330 NPGEWMLSCQNLNHLKAGLQAFFQVQECNKSSSKDNIRGKHVRHYYIAAEEIIWN----- 384
Query: 236 KSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYG 295
++ + T G + + T
Sbjct: 385 --YAPSGIDIFTKENLTAPGSDSAVFFEQGTTRIGGSYKKLVYREYTD------------ 430
Query: 296 LKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSE 355
+F ++ P + A T+ V N +
Sbjct: 431 --ASFTNRKERGPEEEHLGILGPVIWAEV-----------GDTIRVTFHN------KGAY 471
Query: 356 IHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVI----FPYGWTALRFVADN 411
G F G ++ P + V F Y WT + V
Sbjct: 472 PLSIEPIGVRFNKNNEGT---YYSPNYNPQSRSVPPSASHVAPTETFTYEWTVPKEVGPT 528
Query: 412 PGA-----WAFHCHIEPHFHIGMGVVLALGVETVGNIP 444
++ ++P I G++ + + G++
Sbjct: 529 NADPVCLAKMYYSAVDPTKDIFTGLIGPMKICKKGSLH 566
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 | Back alignment and structure |
|---|
Score = 56.1 bits (134), Expect = 2e-08
Identities = 23/156 (14%), Positives = 41/156 (26%), Gaps = 30/156 (19%)
Query: 278 NVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNT 337
N SL L + + D D++ N + + +
Sbjct: 588 NESLLLEDNIRMFTTAPDQVDKEDEDFQESNKMHSMNGFMYGNQPG-------LTMCKGD 640
Query: 338 TVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVI 397
+V L +A N +++H + G+ + G +
Sbjct: 641 SVVWYLFSAG----NEADVHGIYFSGNTYLWRGERRDTAN-------------------L 677
Query: 398 FPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVL 433
FP L D G + C H+ GM
Sbjct: 678 FPQTSLTLHMWPDTEGTFNVECLTTDHYTGGMKQKY 713
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 | Back alignment and structure |
|---|
Score = 50.3 bits (119), Expect = 1e-06
Identities = 26/181 (14%), Positives = 45/181 (24%), Gaps = 23/181 (12%)
Query: 5 WQVQAGTYFYHGH--LGMQRSAGLYGSLIVDVADG-EKEPFHYDGEFNLLLSDWWHRSVH 61
+ Y+ +GL G LIV + EF LL +
Sbjct: 870 EDSACIPWAYYSTVDQVKDLYSGLIGPLIVCRRPYLKVFNPRRKLEFALLFLVF-----D 924
Query: 62 EQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQ 121
E E ++ + + +F S H NG Q L +
Sbjct: 925 ENESWYLDDNIKTYSDHPEKVNKDDEEFIESNKMHAINGRMF---------GNLQGLTMH 975
Query: 122 PNKTYRLRIASTTALASLN-LAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTT 180
+ L+ + H + D DI+ G ++ +
Sbjct: 976 VGDEVNWYLMGMGNEIDLHTVHFHGHSFQYKHRG-----VYSSDVFDIFPGTYQTLEMFP 1030
Query: 181 N 181
Sbjct: 1031 R 1031
|
| >3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} Length = 276 | Back alignment and structure |
|---|
Score = 65.0 bits (158), Expect = 7e-12
Identities = 22/120 (18%), Positives = 42/120 (35%), Gaps = 11/120 (9%)
Query: 313 YDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRG 372
D V + T+ + G + V + + + H +H+HGH + G
Sbjct: 146 PDATHTIVFNDMTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHRWADNRTG 205
Query: 373 EGKFTKEDEKKFNLKNPPLKNTAVIFP---YGWTALRFVADNPGAWAFHCHIEPHFHIGM 429
+ + + P +G+ + GAW +HCH++ H +GM
Sbjct: 206 ILTG--------PDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHVQSHSDMGM 257
|
| >3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} Length = 276 | Back alignment and structure |
|---|
Score = 43.1 bits (101), Expect = 1e-04
Identities = 14/58 (24%), Positives = 21/58 (36%), Gaps = 10/58 (17%)
Query: 8 QAGTYFYHGHLGMQR------SAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRS 59
AG + YH H+ GLYG +IV K D ++ +D +
Sbjct: 108 SAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVR----RKGDVLPDATHTIVFNDMTINN 161
|
| >3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} Length = 343 | Back alignment and structure |
|---|
Score = 63.2 bits (153), Expect = 4e-11
Identities = 21/128 (16%), Positives = 42/128 (32%), Gaps = 13/128 (10%)
Query: 305 PPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGH 364
+ + V + T+ + G + V + + + H +H+HGH
Sbjct: 181 RKGDVLPDATHT--IVFNDMTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGH 238
Query: 365 DFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADN---PGAWAFHCHI 421
+ G + + + P + +A GAW +HCH+
Sbjct: 239 RWADNRTGILTG--------PDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHV 290
Query: 422 EPHFHIGM 429
+ H +GM
Sbjct: 291 QSHSDMGM 298
|
| >3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} Length = 343 | Back alignment and structure |
|---|
Score = 45.5 bits (107), Expect = 2e-05
Identities = 17/95 (17%), Positives = 32/95 (33%), Gaps = 13/95 (13%)
Query: 8 QAGTYFYHGHLGMQR------SAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVH 61
AG + YH H+ GLYG +IV K D ++ +D +
Sbjct: 149 SAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVR----RKGDVLPDATHTIVFNDMTINNRK 204
Query: 62 EQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAH 96
+G+ +++ G++ + H
Sbjct: 205 PHTG---PDFEATVGDRVEIVMITHGEYYHTFHMH 236
|
| >2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Length = 742 | Back alignment and structure |
|---|
Score = 62.7 bits (151), Expect = 1e-10
Identities = 18/137 (13%), Positives = 35/137 (25%), Gaps = 23/137 (16%)
Query: 297 KDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEI 356
+ + G S + L+ + + A ++
Sbjct: 594 RFLPNPAGVQLEDPEFQASNIMHSINGYVFDSLQLSVCLHEVAYWYILSIGAQ----TDF 649
Query: 357 HPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWA 416
G+ F ++T +FP+ + +NPG W
Sbjct: 650 LSVFFSGYTFKHKMVY-------------------EDTLTLFPFSGETVFMSMENPGLWI 690
Query: 417 FHCHIEPHFHIGMGVVL 433
CH + GM +L
Sbjct: 691 LGCHNSDFRNRGMTALL 707
|
| >2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Length = 742 | Back alignment and structure |
|---|
Score = 58.5 bits (140), Expect = 2e-09
Identities = 17/80 (21%), Positives = 26/80 (32%), Gaps = 19/80 (23%)
Query: 354 SEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPG 413
E+H L GH F V + + I P + + + + G
Sbjct: 265 PEVHSIFLEGHTFLVRNHR-------------------QASLEISPITFLTAQTLLMDLG 305
Query: 414 AWAFHCHIEPHFHIGMGVVL 433
+ CHI H H GM +
Sbjct: 306 QFLLFCHISSHQHDGMEAYV 325
|
| >2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Length = 742 | Back alignment and structure |
|---|
Score = 43.1 bits (100), Expect = 2e-04
Identities = 64/460 (13%), Positives = 110/460 (23%), Gaps = 82/460 (17%)
Query: 9 AGTYFYHGH--LGMQRSAGLYGSLIV-DVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEV 65
TY Y H L ++GL G+L+V KE +F LL + + E
Sbjct: 154 CLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKTQTLHKFILLFAVFDEGKSWHSET 213
Query: 66 GLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKT 125
L + + R + N S L K+
Sbjct: 214 K---NSLMQDRDAA----SARAWPKMHTVNGYVNRS-------------LPGLIGCHRKS 253
Query: 126 YRLRIASTT--------ALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVL 177
+ L V+NH+ +E + P + L
Sbjct: 254 VYWHVIGMGTTPEVHSIFLEGHTFLVRNHRQASLE-----ISPITFLTAQTLLMDLGQFL 308
Query: 178 LTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKS 237
L + + + A V+ P L + N L+ + D D+S S
Sbjct: 309 LFCHISSHQHDGMEAYVKVDSCPEEPQLRMKNNEEAEDYDDDLTDSEMDVVRFDDDNSPS 368
Query: 238 FSNKIFALMGSPKPPTNFHRRLTLL-----NTQNTINGFTKWAINNVSLTLPPTPYLGSI 292
F PK ++ + K N Y
Sbjct: 369 FIQIRSVAKKHPKTWVHYIAAEEEDWDYAPLVLAPDDRSYKSQYLNNGPQRIGRKYKKVR 428
Query: 293 KYGLKDA-FDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRP 351
D F + +E ++ P + T+ +I +N
Sbjct: 429 FMAYTDETFKTREAIQ---HESGILGPLLYGEV-----------GDTLLIIFKN------ 468
Query: 352 NLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFP-----YGWTALR 406
S + + HG + + K I P Y WT
Sbjct: 469 QASRPYNIYPHGIT----------DVRPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTV 518
Query: 407 FVADNP-----GAWAFHCHIEPHFHIGMGVVLALGVETVG 441
+ + + G++ L +
Sbjct: 519 EDGPTKSDPRCLTRYYSSFVNMERDLASGLIGPLLICYKE 558
|
| >2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Length = 447 | Back alignment and structure |
|---|
Score = 56.8 bits (137), Expect = 7e-09
Identities = 21/107 (19%), Positives = 32/107 (29%), Gaps = 20/107 (18%)
Query: 338 TVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVI 397
TV + +H+ G F + G +PPL +
Sbjct: 348 TVRIFFGVGGPNFT-----SSFHVIGEIFDHVYS-LGSVV----------SPPLIGVQTV 391
Query: 398 F--PYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGN 442
P G T + F D G + H + G+V L V+ N
Sbjct: 392 SVPPGGATIVDFKIDRAGRYILVDHA--LSRLEHGLVGFLNVDGPKN 436
|
| >2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Length = 447 | Back alignment and structure |
|---|
Score = 41.4 bits (97), Expect = 5e-04
Identities = 13/52 (25%), Positives = 22/52 (42%), Gaps = 6/52 (11%)
Query: 8 QAGTYFYHGH---LGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWW 56
G Y YH + + G+YG L+V+ G D EF ++ + +
Sbjct: 252 IPGIYVYHCATPSVPTHITNGMYGLLLVEPEGGLP---QVDREFYVMQGEIY 300
|
| >1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A Length = 327 | Back alignment and structure |
|---|
Score = 54.5 bits (131), Expect = 2e-08
Identities = 28/179 (15%), Positives = 55/179 (30%), Gaps = 29/179 (16%)
Query: 8 QAGTYFYHGHLGM---QRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWW-HRSVHEQ 63
Q G Y YH + + G+YG ++V+ +G D EF ++ D++ Q
Sbjct: 127 QPGLYIYHCAVAPVGMHIANGMYGLILVEPKEGLP---KVDKEFYIVQGDFYTKGKKGAQ 183
Query: 64 EVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPN 123
+ +P+ ++ NG L +
Sbjct: 184 GLQPFDMDKAVAEQPEYVVFNG----------------------HVGALTGDNALKAKAG 221
Query: 124 KTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQ 182
+T R+ + + + V V +G + V + +G S V +
Sbjct: 222 ETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEGGKLINENVQSTIVPAGGSAIVEFKVDI 280
|
| >1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A Length = 327 | Back alignment and structure |
|---|
Score = 51.4 bits (123), Expect = 2e-07
Identities = 14/88 (15%), Positives = 26/88 (29%), Gaps = 13/88 (14%)
Query: 354 SEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPG 413
+ + +H+ G F + GK + ++ G + F D PG
Sbjct: 234 NLVSSFHVIGEIFDKVYVEGGKL-----------INENVQSTIVPAGGSAIVEFKVDIPG 282
Query: 414 AWAFHCHIEPHFHI--GMGVVLALGVET 439
+ H +G + G E
Sbjct: 283 NYTLVDHSIFRAFNKGALGQLKVEGAEN 310
|
| >1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... Length = 336 | Back alignment and structure |
|---|
Score = 51.3 bits (123), Expect = 2e-07
Identities = 21/100 (21%), Positives = 28/100 (28%), Gaps = 17/100 (17%)
Query: 352 NLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKN--TAVIFPYGWTALRFVA 409
+ HL G + GKF NPP ++ T I A +
Sbjct: 241 QANRDTRPHLIGGHGDWVWE-TGKFA----------NPPQRDLETWFIRGGSAGAALYTF 289
Query: 410 DNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALA 449
PG +A+ H A G V N L
Sbjct: 290 KQPGVYAYLNHNLIEAFELG----AAGHIKVEGKWNDDLM 325
|
| >1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... Length = 336 | Back alignment and structure |
|---|
Score = 45.2 bits (107), Expect = 3e-05
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 8/57 (14%)
Query: 8 QAGTYFYH----GHLGMQRSAGLYGSLIVDVADGEK----EPFHYDGEFNLLLSDWW 56
++GT+ YH G + +G+ G+L+V DG K +P HYD + + D +
Sbjct: 122 RSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPLHYDRAYTIGEFDLY 178
|
| >1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A Length = 333 | Back alignment and structure |
|---|
Score = 44.5 bits (105), Expect = 4e-05
Identities = 17/82 (20%), Positives = 27/82 (32%), Gaps = 18/82 (21%)
Query: 341 VILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKN--TAVIF 398
V+ ++ R HL G ++ GKF N P ++ T I
Sbjct: 235 VLFVHSQPNRD-----SRPHLIGGHGDLVWE-TGKFH----------NAPERDLETWFIR 278
Query: 399 PYGWTALRFVADNPGAWAFHCH 420
A + PG +A+ H
Sbjct: 279 GGTAGAALYKFLQPGVYAYVNH 300
|
| >2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... Length = 340 | Back alignment and structure |
|---|
Score = 43.3 bits (102), Expect = 9e-05
Identities = 20/92 (21%), Positives = 28/92 (30%), Gaps = 15/92 (16%)
Query: 352 NLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKN--TAVIFPYGWTALRFVA 409
+ HL G + GKF NPP + T +I A +
Sbjct: 247 QANRDTRPHLIGGHGDYVWA-TGKFR----------NPPDLDQETWLIPGGTAGAAFYTF 295
Query: 410 DNPGAWAFHCHIEPH-FHIG-MGVVLALGVET 439
PG +A+ H F +G G G
Sbjct: 296 RQPGVYAYVNHNLIEAFELGAAGHFKVTGEWN 327
|
| >2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... Length = 340 | Back alignment and structure |
|---|
Score = 42.6 bits (100), Expect = 2e-04
Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 8/59 (13%)
Query: 8 QAGTYFYH----GHLGMQRSAGLYGSLIVDVADGEK----EPFHYDGEFNLLLSDWWHR 58
+ G + YH G + ++G+ G+++V DG K +P YD + + D++
Sbjct: 128 KPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPLTYDKIYYVGEQDFYVP 186
|
| >1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 Length = 647 | Back alignment and structure |
|---|
Score = 42.4 bits (99), Expect = 2e-04
Identities = 14/78 (17%), Positives = 20/78 (25%), Gaps = 16/78 (20%)
Query: 352 NLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADN 411
+IH H HG G + + + P + L A
Sbjct: 258 GSRDIHVVHFHGQTLLENGTQQHQ----------------LGVWPLLPGSFKTLEMKASK 301
Query: 412 PGAWAFHCHIEPHFHIGM 429
PG W + GM
Sbjct: 302 PGWWLLDTEVGEIQRAGM 319
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 463 | |||
| 1aoz_A | 552 | Ascorbate oxidase; oxidoreductase(oxygen acceptor) | 100.0 | |
| 3sqr_A | 580 | Laccase; multicopper oxidase, glycosylation, oxido | 100.0 | |
| 1zpu_A | 534 | Iron transport multicopper oxidase FET3; ferroxida | 100.0 | |
| 3pxl_A | 499 | Laccase; 4-copper protein, metal-binding, oxidored | 100.0 | |
| 3t6v_A | 495 | Laccase; beta barrel, oxidoreductase; HET: CBS; 2. | 100.0 | |
| 2q9o_A | 559 | Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct | 100.0 | |
| 1v10_A | 521 | Laccase; multicopper blue oxidase, oxidase; 1.7A { | 100.0 | |
| 1hfu_A | 503 | Laccase 1; oxidoreductase, blue multi-copper oxida | 100.0 | |
| 2xu9_A | 439 | Laccase; oxidoreductase, multicopper oxidases; 1.5 | 100.0 | |
| 3aw5_A | 448 | Multicopper oxidase; beta barrel, oxidoreductase; | 100.0 | |
| 2uxt_A | 451 | Protein SUFI, SUFI; oxidoreductase, periplasmic, c | 100.0 | |
| 3abg_A | 534 | Bilirubin oxidase; cleavage on PAIR of basic resid | 100.0 | |
| 2wsd_A | 513 | Spore coat protein A; oxidoreductase, multi-copper | 100.0 | |
| 3gyr_A | 612 | PHS, phenoxazinone synthase; metalloprotein, lacca | 100.0 | |
| 2g23_A | 612 | PHS, phenoxazinone synthase; copper, metalloprotei | 100.0 | |
| 3zx1_A | 481 | Oxidoreductase, putative; laccase, metallo-oxidase | 100.0 | |
| 3od3_A | 488 | Blue copper oxidase CUEO; multicopper oxidase, Cu( | 100.0 | |
| 2dv6_A | 447 | Nitrite reductase; electron transfer, reduction, d | 100.0 | |
| 2j5w_A | 1065 | Ceruloplasmin, ferroxidase; oxidoreductase, plasma | 100.0 | |
| 2r7e_A | 742 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 100.0 | |
| 2j5w_A | 1065 | Ceruloplasmin, ferroxidase; oxidoreductase, plasma | 100.0 | |
| 1kbv_A | 327 | ANIA, major outer membrane protein PAN 1; ANIA[NO2 | 99.97 | |
| 3g5w_A | 318 | Multicopper oxidase type 1; two domain, laccase, n | 99.97 | |
| 2zwn_A | 339 | Two-domain type laccase; muticopper oxidase, oxido | 99.96 | |
| 2zwn_A | 339 | Two-domain type laccase; muticopper oxidase, oxido | 99.96 | |
| 2zoo_A | 442 | Probable nitrite reductase; electron transfer, ele | 99.96 | |
| 3cg8_A | 343 | Laccase; oxidoreductase, multicopper blue protein; | 99.96 | |
| 3gdc_A | 288 | Multicopper oxidase; beta sandwich, plasmid, oxido | 99.95 | |
| 1oe1_A | 336 | Dissimilatory copper-containing nitrite reductase; | 99.95 | |
| 3g5w_A | 318 | Multicopper oxidase type 1; two domain, laccase, n | 99.95 | |
| 3t9w_A | 299 | Small laccase, multi-copper oxidase; two-domain co | 99.94 | |
| 1mzy_A | 333 | Copper-containing nitrite reductase; mutant M182T, | 99.94 | |
| 3kw8_A | 276 | Laccase, putative copper oxidase; two-domain lacca | 99.94 | |
| 2bw4_A | 340 | Copper-containing nitrite reductase; oxidoreductas | 99.94 | |
| 3tas_A | 313 | Small laccase, multi-copper oxidase; two-domain la | 99.94 | |
| 3gdc_A | 288 | Multicopper oxidase; beta sandwich, plasmid, oxido | 99.92 | |
| 2dv6_A | 447 | Nitrite reductase; electron transfer, reduction, d | 99.92 | |
| 1sdd_B | 647 | Coagulation factor V; copper-binding protein, cofa | 99.89 | |
| 1sdd_A | 306 | Coagulation factor V; copper-binding protein, cofa | 99.89 | |
| 1sdd_B | 647 | Coagulation factor V; copper-binding protein, cofa | 99.89 | |
| 3tas_A | 313 | Small laccase, multi-copper oxidase; two-domain la | 99.88 | |
| 1sdd_A | 306 | Coagulation factor V; copper-binding protein, cofa | 99.88 | |
| 3t9w_A | 299 | Small laccase, multi-copper oxidase; two-domain co | 99.86 | |
| 3kw8_A | 276 | Laccase, putative copper oxidase; two-domain lacca | 99.86 | |
| 1kbv_A | 327 | ANIA, major outer membrane protein PAN 1; ANIA[NO2 | 99.85 | |
| 2r7e_B | 770 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 99.84 | |
| 2bw4_A | 340 | Copper-containing nitrite reductase; oxidoreductas | 99.84 | |
| 2r7e_B | 770 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 99.83 | |
| 3cg8_A | 343 | Laccase; oxidoreductase, multicopper blue protein; | 99.81 | |
| 1mzy_A | 333 | Copper-containing nitrite reductase; mutant M182T, | 99.81 | |
| 2r7e_A | 742 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 99.76 | |
| 2zoo_A | 442 | Probable nitrite reductase; electron transfer, ele | 99.74 | |
| 1oe1_A | 336 | Dissimilatory copper-containing nitrite reductase; | 99.74 | |
| 2xu9_A | 439 | Laccase; oxidoreductase, multicopper oxidases; 1.5 | 99.26 | |
| 3cvb_A | 105 | Plastocyanin; cupredoxin, SELF assembly, copper, e | 99.15 | |
| 2aan_A | 139 | Auracyanin A; cupredoxin fold, electron transport; | 99.1 | |
| 1aoz_A | 552 | Ascorbate oxidase; oxidoreductase(oxygen acceptor) | 99.05 | |
| 2uxt_A | 451 | Protein SUFI, SUFI; oxidoreductase, periplasmic, c | 99.0 | |
| 3pxl_A | 499 | Laccase; 4-copper protein, metal-binding, oxidored | 98.95 | |
| 3t6v_A | 495 | Laccase; beta barrel, oxidoreductase; HET: CBS; 2. | 98.94 | |
| 1hfu_A | 503 | Laccase 1; oxidoreductase, blue multi-copper oxida | 98.92 | |
| 1v10_A | 521 | Laccase; multicopper blue oxidase, oxidase; 1.7A { | 98.91 | |
| 3sqr_A | 580 | Laccase; multicopper oxidase, glycosylation, oxido | 98.9 | |
| 2q9o_A | 559 | Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct | 98.89 | |
| 2gim_A | 106 | Plastocyanin; beta sheet, Cu, helix, electron tran | 98.86 | |
| 1qhq_A | 140 | Protein (auracyanin); electron transfer, cupredoxi | 98.76 | |
| 1zpu_A | 534 | Iron transport multicopper oxidase FET3; ferroxida | 98.76 | |
| 3zx1_A | 481 | Oxidoreductase, putative; laccase, metallo-oxidase | 98.64 | |
| 1pcs_A | 98 | Plastocyanin; electron transport; 2.15A {Synechocy | 98.63 | |
| 2plt_A | 98 | Plastocyanin; electron transport; 1.50A {Chlamydom | 98.59 | |
| 1bxv_A | 91 | Plastocyanin; copper protein, electron transfer; 1 | 98.5 | |
| 3aw5_A | 448 | Multicopper oxidase; beta barrel, oxidoreductase; | 98.47 | |
| 1b3i_A | 97 | PETE protein, protein (plastocyanin); electron tra | 98.45 | |
| 1byp_A | 99 | Protein (plastocyanin); electron transfer, photosy | 98.38 | |
| 4hci_A | 100 | Cupredoxin 1; structural genomics, niaid, national | 98.35 | |
| 1iby_A | 112 | Nitrosocyanin; RED copper, cupredoxin, beta hairpi | 98.34 | |
| 3abg_A | 534 | Bilirubin oxidase; cleavage on PAIR of basic resid | 98.25 | |
| 1kdj_A | 102 | Plastocyanin; electron transfer, photosystem, PAI- | 98.25 | |
| 2wsd_A | 513 | Spore coat protein A; oxidoreductase, multi-copper | 98.23 | |
| 1plc_A | 99 | Plastocyanin; electron transport; 1.33A {Populus n | 98.04 | |
| 2cal_A | 154 | Rusticyanin; iron respiratory electron transport c | 98.0 | |
| 3od3_A | 488 | Blue copper oxidase CUEO; multicopper oxidase, Cu( | 98.0 | |
| 2ov0_A | 105 | Amicyanin; beta-sandwich, electron transport; 0.75 | 97.86 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 97.77 | |
| 3gyr_A | 612 | PHS, phenoxazinone synthase; metalloprotein, lacca | 97.56 | |
| 2g23_A | 612 | PHS, phenoxazinone synthase; copper, metalloprotei | 97.54 | |
| 1iuz_A | 98 | Plastocyanin; electron transport; 1.60A {Ulva pert | 97.21 | |
| 3ef4_A | 124 | Pseudoazurin, blue copper protein; electron transf | 97.19 | |
| 1id2_A | 106 | Amicyanin; beta barrel, type-1 blue copper protein | 97.13 | |
| 2aan_A | 139 | Auracyanin A; cupredoxin fold, electron transport; | 97.12 | |
| 3erx_A | 123 | Pseudoazurin; copper protein, high-resolution, E t | 97.06 | |
| 3tu6_A | 127 | Pseudoazurin (blue copper protein); cupredoxins, b | 96.98 | |
| 3c75_A | 132 | Amicyanin; copper proteins, electron transfer comp | 96.93 | |
| 1iby_A | 112 | Nitrosocyanin; RED copper, cupredoxin, beta hairpi | 96.58 | |
| 3ay2_A | 167 | Lipid modified azurin protein; beta sandwich, bact | 96.54 | |
| 1bxv_A | 91 | Plastocyanin; copper protein, electron transfer; 1 | 96.35 | |
| 1cuo_A | 129 | Protein (azurin ISO-2); beta barrel, periplasmic, | 96.35 | |
| 1paz_A | 123 | Pseudoazurin precursor; electron transfer(cupropro | 96.3 | |
| 3tu6_A | 127 | Pseudoazurin (blue copper protein); cupredoxins, b | 96.23 | |
| 3erx_A | 123 | Pseudoazurin; copper protein, high-resolution, E t | 96.2 | |
| 1pmy_A | 123 | Pseudoazurin; electron transfer(cuproprotein); 1.5 | 96.06 | |
| 3ef4_A | 124 | Pseudoazurin, blue copper protein; electron transf | 95.98 | |
| 1nwp_A | 128 | Azurin; electron transport, cupredoxin, electron t | 95.91 | |
| 2ccw_A | 129 | Azurin II, AZN-2; electron transport (cuproprotein | 95.82 | |
| 3sbq_A | 638 | Nitrous-oxide reductase; beta-propeller, cupredoxi | 95.79 | |
| 4hci_A | 100 | Cupredoxin 1; structural genomics, niaid, national | 95.7 | |
| 2iaa_C | 128 | Azurin; quinoprotein, tryptophan tryptophylquinone | 95.7 | |
| 3cvb_A | 105 | Plastocyanin; cupredoxin, SELF assembly, copper, e | 95.63 | |
| 2cua_A | 135 | Protein (CUA); CUA center, electron transport; 1.6 | 95.54 | |
| 2ccw_A | 129 | Azurin II, AZN-2; electron transport (cuproprotein | 95.43 | |
| 1paz_A | 123 | Pseudoazurin precursor; electron transfer(cupropro | 95.18 | |
| 3ay2_A | 167 | Lipid modified azurin protein; beta sandwich, bact | 95.14 | |
| 3fsa_A | 125 | Azurin; copper, cupredoxin fold, metal-binding, pr | 95.13 | |
| 1qhq_A | 140 | Protein (auracyanin); electron transfer, cupredoxi | 95.11 | |
| 1cuo_A | 129 | Protein (azurin ISO-2); beta barrel, periplasmic, | 94.98 | |
| 1pmy_A | 123 | Pseudoazurin; electron transfer(cuproprotein); 1.5 | 94.96 | |
| 2iaa_C | 128 | Azurin; quinoprotein, tryptophan tryptophylquinone | 94.93 | |
| 1nwp_A | 128 | Azurin; electron transport, cupredoxin, electron t | 94.75 | |
| 2ux6_A | 122 | Pseudoazurin; type-1 copper, metal-binding, redox | 94.66 | |
| 3fsa_A | 125 | Azurin; copper, cupredoxin fold, metal-binding, pr | 94.55 | |
| 3s8f_B | 168 | Cytochrome C oxidase subunit 2; complex IV, respir | 93.96 | |
| 2cal_A | 154 | Rusticyanin; iron respiratory electron transport c | 93.5 | |
| 2gim_A | 106 | Plastocyanin; beta sheet, Cu, helix, electron tran | 93.32 | |
| 2plt_A | 98 | Plastocyanin; electron transport; 1.50A {Chlamydom | 92.32 | |
| 1pcs_A | 98 | Plastocyanin; electron transport; 2.15A {Synechocy | 91.85 | |
| 1kdj_A | 102 | Plastocyanin; electron transfer, photosystem, PAI- | 91.43 | |
| 1b3i_A | 97 | PETE protein, protein (plastocyanin); electron tra | 90.8 | |
| 1iuz_A | 98 | Plastocyanin; electron transport; 1.60A {Ulva pert | 90.03 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 89.6 | |
| 3isy_A | 120 | Bsupi, intracellular proteinase inhibitor; intrace | 89.39 | |
| 2ux6_A | 122 | Pseudoazurin; type-1 copper, metal-binding, redox | 87.9 | |
| 2ov0_A | 105 | Amicyanin; beta-sandwich, electron transport; 0.75 | 87.1 | |
| 1plc_A | 99 | Plastocyanin; electron transport; 1.33A {Populus n | 81.69 | |
| 1byp_A | 99 | Protein (plastocyanin); electron transfer, photosy | 81.3 | |
| 2cua_A | 135 | Protein (CUA); CUA center, electron transport; 1.6 | 80.69 | |
| 3sbq_A | 638 | Nitrous-oxide reductase; beta-propeller, cupredoxi | 80.55 |
| >1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-88 Score=712.12 Aligned_cols=461 Identities=69% Similarity=1.242 Sum_probs=359.3
Q ss_pred cccccccceeEEEeccchhhhhcceeeEEEEeCCCCCCCCCCCCcceEEEEeeeecccHHHHHhhhcCCCCCCCCCCCeE
Q 012467 2 LDVWQVQAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTL 81 (463)
Q Consensus 2 ~~~~~~~~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~d~~ 81 (463)
|+|.+.|+||||||||++.|+++||+|+|||+++++...|+++|+|++|+|+||+++...+++..+...+..|.+.++++
T Consensus 91 Y~f~~~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (552)
T 1aoz_A 91 YNFTVDNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPFHYDGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTI 170 (552)
T ss_dssp EEEECCSCEEEEEEECSTTTGGGTCEEEEEEECCTTCCCSSCCSEEEEEEEEEECSSCHHHHHHHTTSSSCCCCCSCSEE
T ss_pred EEEECCCCEEEEEEECchhHHhccCeeeEEEeCCcccCCCCCCCccceEEeecccCCCHHHHHhhhhcccccCCCCCCeE
Confidence 78899999999999999999999999999999987655678889999999999999988777655544333344578999
Q ss_pred EECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCccccee
Q 012467 82 LINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPF 161 (463)
Q Consensus 82 liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~ 161 (463)
||||++.++|+....+. .....|+..++..+.++.++|++||+|||||||+|+.+.+.|+|+||+|+|||+||++++|+
T Consensus 171 liNG~~~~~c~~~~~~~-~~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P~ 249 (552)
T 1aoz_A 171 LLNGRGQFDCSIAAKYD-SNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEADGNYVQPF 249 (552)
T ss_dssp EETTBCCSSSBTTGGGC-TTSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEETTCCEEEEEETTEEEEEE
T ss_pred EECCccccCcccCcccc-cccccccccCCCCCCceEEEEcCCCEEEEEEEcccccceEEEEEcCcEEEEEEECCcccCce
Confidence 99999999998633221 12234663323344556899999999999999999999999999999999999999999999
Q ss_pred eEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCCCCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCccccccccc
Q 012467 162 EVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNK 241 (463)
Q Consensus 162 ~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~ 241 (463)
.++.|.|+|||||||+|+++..+.|+|||++............+|+|+|.++.....+..+.|..|.+++......+...
T Consensus 250 ~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~~~~~~~~~~~ail~y~~~~~~~~p~~~~p~~p~~~~~~~~~~~~l~ 329 (552)
T 1aoz_A 250 YTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTLLNYLPNSVSKLPTSPPPQTPAWDDFDRSKNFTYR 329 (552)
T ss_dssp EESCEEECTTCEEEEEEECCSCTTCCEEEEEEEESSCCCSCCEEEEEEETTSCTTSCCSSCCCCCCCTTCHHHHHHHHTT
T ss_pred EEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcccCCCCCccEEEEEEECCCCCCCCCCCCCCCCCcccccccccccccc
Confidence 99999999999999999995435789999998765323456789999998754322222333444544443222111111
Q ss_pred ccccCCCCCCCCccceEEEEEeeeeccCCeEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCC
Q 012467 242 IFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVN 321 (463)
Q Consensus 242 ~~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 321 (463)
.........++...++++.+....+..++...|+|||.+|..|..|+|.+.+.++++.|+...++..+..+|+...++.+
T Consensus 330 ~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~ 409 (552)
T 1aoz_A 330 ITAAMGSPKPPVKFNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTN 409 (552)
T ss_dssp CCBCTTCCCCCSSCSEEEEEEEEEEEETTEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCC
T ss_pred ccccCCCCCCCCCCcEEEEEEEeeccCCCeEEEEECCCccCCCCCCHHHHHhhcCccccccCCCcccccccccccccccc
Confidence 11111112345567899988876655556678999999999999999988887777766544433222112332222223
Q ss_pred CCccccceEEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCc
Q 012467 322 ANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYG 401 (463)
Q Consensus 322 ~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g 401 (463)
...+.++.++.++.|++|+|+|+|.+.+.+...+.||||||||+|+||++|.|.|++.++..+|+.+|+|||||.|+++|
T Consensus 410 ~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g 489 (552)
T 1aoz_A 410 EKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYG 489 (552)
T ss_dssp TTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTE
T ss_pred ccccccceEEEecCCCEEEEEEeCCcccccccCCCCCEEEcCCceEEEecccCccCcccccccccCCCCccCeEEeCCCc
Confidence 34566777899999999999999987541112347999999999999999999998765678999999999999999999
Q ss_pred EEEEEEEcCCceeeeecccchHhHHccceeeeeccccccccCCCCCccccCcccCCCCCCCC
Q 012467 402 WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACGLTGKRFMNPKQN 463 (463)
Q Consensus 402 ~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~~~~~~~P~~~~~C~~~~~~~~~~~~~ 463 (463)
|++|||+|||||.|+|||||++|++.|||++|.|++++++++|++++.|+.+++.+++|+-|
T Consensus 490 ~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~~~~~~P~~~~~C~~~~~~~~~~~~~ 551 (552)
T 1aoz_A 490 WTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVEKVGRIPTKALACGGTAKSLINNPKN 551 (552)
T ss_dssp EEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECGGGCCCCCHHHHSSHHHHHHHSCCCSC
T ss_pred eEEEEEEcCCCeEEEEEeeehhHhhCCCeEEEEeCchhhccCCcchhhhhccCcccccCCCC
Confidence 99999999999999999999999999999999999999999999999999999988888643
|
| >3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-80 Score=643.00 Aligned_cols=400 Identities=25% Similarity=0.404 Sum_probs=308.9
Q ss_pred cccccccceeEEEeccchhhhhcceeeEEEEeCCCCCCCCCCCCcce-EEEEeeeecccHHHHHhhhcCCCCCCCCCCCe
Q 012467 2 LDVWQVQAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEF-NLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQT 80 (463)
Q Consensus 2 ~~~~~~~~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~~~p~~~d~e~-~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~d~ 80 (463)
|+|.+.|+||||||||.+.|+.+||+|+|||+++++ ..||.|. +|+|+||+++...++.......+ .+.+|+
T Consensus 155 Y~f~~~q~GT~WYHsH~~~q~~~GL~G~lIV~~p~~----~~yD~d~~~l~l~Dw~~~~~~~~~~~~~~~~---~~~~d~ 227 (580)
T 3sqr_A 155 YKFQVTQYGTTWYHSHFSLQYGDGLFGPLIINGPAT----ADYDEDVGVIFLQDWAHESVFEIWDTARLGA---PPALEN 227 (580)
T ss_dssp EEEECCCCEEEEEEECSTTGGGGTCEEEEEEECCCS----SCCSEEEEEEEEEEECSSCHHHHHHHHTTSC---CCCBSE
T ss_pred EEEECCCCcceEEeecccccccCcCEEEEEeeCccc----CCCCccceEEEEEEEecCCHHHHHHHHhccC---CCCCce
Confidence 889999999999999999999999999999998754 4689888 99999999999888876655432 468899
Q ss_pred EEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccce
Q 012467 81 LLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQP 160 (463)
Q Consensus 81 ~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P 160 (463)
+||||++.++|+... ...|. .....+.++|++||+|||||||+|..+.+.|+|+||+|+|||+||.+++|
T Consensus 228 ~liNG~~~~~c~~~~------~~~~~----~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa~DG~~v~P 297 (580)
T 3sqr_A 228 TLMNGTNTFDCSAST------DPNCV----GGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVP 297 (580)
T ss_dssp EEETTBCCCCCTTCC------CTTBC----CCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEE
T ss_pred EEECCcccCCCcccc------ccccc----cCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEEeCCccCCc
Confidence 999999999887521 12443 23345689999999999999999999999999999999999999999999
Q ss_pred eeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCC---CCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCccccc
Q 012467 161 FEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP---ATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKS 237 (463)
Q Consensus 161 ~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~---~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~ 237 (463)
+.++.|.|++||||||+|++++ ++|+||||+.....|. ......|||+|.++... .|..+.+........
T Consensus 298 ~~~~~l~i~pGqRydVlv~a~~-~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~------~P~~~~~~~~~~~~~ 370 (580)
T 3sqr_A 298 YTTDTLLIGIGQRYDVIVEANA-AADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIA------NPTSVGTTPRGTCED 370 (580)
T ss_dssp EEESSEEECTTCEEEEEEECCS-CSSEEEEECCCCTTTSCBTTGGGCEEEEESSTTCCC------CCCCCCCCCCCCSCC
T ss_pred eEeeEEEEccceEEEEEEEeCC-CCCeEEEEEecccccCccCCCCceEEEEEECCCCCC------CCCCCCCCccchhhc
Confidence 9999999999999999999998 5789999998876663 22357999999864321 122222222111111
Q ss_pred c-cccccccCCCCCCCCccceEEEEEeeeeccCCeEEEEEecccCCC-CCCCCccccccCCCCCCCCCCCCCCCCCCccc
Q 012467 238 F-SNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTL-PPTPYLGSIKYGLKDAFDQNGPPENFSNEYDV 315 (463)
Q Consensus 238 ~-~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~iNg~~~~~-p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~ 315 (463)
. ...|.+..+ ...|...+.++.+.+. .++...|+|||.+|.. ++.|.|.+.+.+. ..|. + +
T Consensus 371 ~~~~~L~P~~~-~~~~~~~~~~~~l~~~---~~~~~~w~iN~~s~~~~~~~P~L~~~~~g~-~~~~----~-----~--- 433 (580)
T 3sqr_A 371 EPVASLVPHLA-LDVGGYSLVDEQVSSA---FTNYFTWTINSSSLLLDWSSPTTLKIFNNE-TIFP----T-----E--- 433 (580)
T ss_dssp SCGGGCCBSSC-CBCCSEEEEEEEEEEE---ESSSEEEEETTBCCCCCTTSCHHHHHHTTC-CCCC----G-----G---
T ss_pred ccccccccCCC-CCCCCccceEEEEEec---cCCceeEEECCEecccCCCCCchhhhhcCC-ccCC----C-----C---
Confidence 1 122322221 2223344555555442 2356789999999975 5888887654321 1220 0 1
Q ss_pred CCCCCCCCccccceEEEc----cCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcc-ccccCCCCCCC
Q 012467 316 MKPPVNANTTLGSGVYML----GLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKE-DEKKFNLKNPP 390 (463)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~----~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~-~~~~~n~~~p~ 390 (463)
..++.+ +.|++|||+|+|.+.. .+.||||||||+|+||++|.|.|+++ ++..+|+.||+
T Consensus 434 ------------~~~~~~~~~~~~~~~VeiVi~n~~~~----~~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~ 497 (580)
T 3sqr_A 434 ------------YNVVALEQTNANEEWVVYVIEDLTGF----GIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPP 497 (580)
T ss_dssp ------------GCEEEECC----CCEEEEEEEECSSS----CCCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCC
T ss_pred ------------cceeecccccCCCcEEEEEEeCCCcc----ccceeeEecCceEEEEecCCCccCccccccccccCCCc
Confidence 123444 4699999999998722 12899999999999999999999876 56789999999
Q ss_pred ccceEEeCCCcEEEEEEEcCCceeeeecccchHhHHccceeeeecccccccc---CCCC-CccccCcccCCC
Q 012467 391 LKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGN---IPNQ-ALACGLTGKRFM 458 (463)
Q Consensus 391 ~rDTv~v~~~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~~~~~~---~P~~-~~~C~~~~~~~~ 458 (463)
+|||+.|+++||++|||++||||.|+|||||++|++.||+++|+|+++++++ +|+. ...|..|+.+..
T Consensus 498 ~rDTv~v~~~g~~~irf~adNPG~W~~HCHi~~H~~~Gm~~~~~e~~~~i~~~~~~~~~~~~~C~~~~~~~~ 569 (580)
T 3sqr_A 498 RRDVAALPGNGYLAIAFKLDNPGSWLLHCHIAWHASEGLAMQFVESQSSIAVKMTDTAIFEDTCANWNAYTP 569 (580)
T ss_dssp EESEEEECTTSEEEEEEESCSCEEEEEEECSHHHHHTTCEEEEEESGGGCCCCHHHHHHHHHHHHHHHHHGG
T ss_pred eeeEEEeCCCceEEEEEEcCCCeeeEEEECcHHHhhCCCcEEEEECHHHHhhccCCcHHHHHhhHHHhhhcc
Confidence 9999999999999999999999999999999999999999999999998875 3444 578998876443
|
| >1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-76 Score=617.15 Aligned_cols=389 Identities=27% Similarity=0.409 Sum_probs=295.7
Q ss_pred cccccc-cceeEEEeccchhhhhcceeeEEEEeCCCCCCCCCCCCcceEEEEeeeecccHHHHHhhhcCC--CCCCCCCC
Q 012467 2 LDVWQV-QAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSR--PLRWIGEP 78 (463)
Q Consensus 2 ~~~~~~-~~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~~~~~~~~~--~~~~~~~~ 78 (463)
|+|.+. |+||||||||++.|+++||+|+|||+++++ |+.||+|++|+|+||+++...++...+... .....+.+
T Consensus 91 Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~---p~~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~g~~~~~ 167 (534)
T 1zpu_A 91 YNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDSF---PYDYDEELSLSLSEWYHDLVTDLTKSFMSVYNPTGAEPIP 167 (534)
T ss_dssp EEEECSSCCEEEEEECCSSSGGGGTCEEEEEEECTTC---CSCCSEEEEEEEEEECSSCHHHHHHHHSSTTCTTCCCCCC
T ss_pred EEEEeCccceeEEEEEcCcccccCcceeeEEeCCCCC---CCCCcceEEEEeeccccCCHHHHHHHHhccccCCCCCCCC
Confidence 788888 999999999999999999999999999864 678899999999999999988876554322 11114578
Q ss_pred CeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCccc
Q 012467 79 QTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYV 158 (463)
Q Consensus 79 d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v 158 (463)
+.+||||+..+ +++|++||+|||||||+|+.+.+.|+|+||+|+|||+||+++
T Consensus 168 d~~liNG~~~~---------------------------~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~ 220 (534)
T 1zpu_A 168 QNLIVNNTMNL---------------------------TWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITT 220 (534)
T ss_dssp SEEEETTBSSC---------------------------EEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEE
T ss_pred ceEEECCCCce---------------------------EEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEeccCcCc
Confidence 99999999754 799999999999999999999999999999999999999999
Q ss_pred ceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCC------CCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCC
Q 012467 159 QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP------ATPPALTLLNYHPTSASKIPLSPPPITPRWDDY 232 (463)
Q Consensus 159 ~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~------~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~ 232 (463)
+|..++.|.|++||||||+|++++.+.++|||++.....+. ......++|+|.++.... .+ +..+.+...
T Consensus 221 ~P~~~~~l~l~~gqR~dvlv~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p-~~---~~~~~~~~~ 296 (534)
T 1zpu_A 221 EKNVTDMLYITVAQRYTVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALP-TQ---NYVDSIDNF 296 (534)
T ss_dssp EEEEESCEEECTTCEEEEEEECCSCSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBC-CC---CCCSCSSCS
T ss_pred cccEeceEEECccceEEEEEEcCCCCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCC-CC---Ccccccccc
Confidence 99999999999999999999998755679999998654321 234567999998643211 00 001111110
Q ss_pred cccccccccccccCCCCCCCCccceEEEEEeeeec-cCCeEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCC
Q 012467 233 DHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNT-INGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSN 311 (463)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~-~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~ 311 (463)
... ..+.+... ...+..+++++.+...... .++...|+|||++|..|+.|.|.+.... +.+. . .+..+
T Consensus 297 --~~~--~~l~p~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~iNg~s~~~~~~P~L~~~~~~--~~~~-~-~~~~~-- 365 (534)
T 1zpu_A 297 --LDD--FYLQPYEK-EAIYGEPDHVITVDVVMDNLKNGVNYAFFNNITYTAPKVPTLMTVLSS--GDQA-N-NSEIY-- 365 (534)
T ss_dssp --CCG--GGCCBSSC-CCCCCSCSEEEEEEEEEEECTTSCEEEEETTBCCCCCSSCHHHHHTTS--GGGT-T-CGGGG--
T ss_pred --ccc--ccceeCCC-CCCCCCCCeEEEEEEEeeccCCceeEEEECCCcccCCCCCceeeeccc--Cccc-C-CCccc--
Confidence 000 11222211 1223456788887765432 2455679999999999998988765421 1110 0 01000
Q ss_pred CcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCC----------CCCcccc
Q 012467 312 EYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEG----------KFTKEDE 381 (463)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g----------~~~~~~~ 381 (463)
..++.++.++.|++|+|+|+|.+.+ .||||||||+|+||+++.+ .|++.+.
T Consensus 366 -------------~~~~~~~~~~~g~~v~ivi~N~~~~------~HP~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~~ 426 (534)
T 1zpu_A 366 -------------GSNTHTFILEKDEIVEIVLNNQDTG------THPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNH 426 (534)
T ss_dssp -------------CSSSCEEEECTTCEEEEEEEECSSS------CEEEEETTCCEEEEEECCCCCGGGTCCCCCCBTTBC
T ss_pred -------------CCCceEEEeCCCCEEEEEEeCCCCC------CCCeEecCCceEEEeecCCccccccCcccccCcccc
Confidence 1123468999999999999998876 9999999999999999864 3432221
Q ss_pred ccCCCCCCCccceEEeCCCcEEEEEEEcCCceeeeecccchHhHHccceeeeecccccccc-----CCC-CCccccCccc
Q 012467 382 KKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGN-----IPN-QALACGLTGK 455 (463)
Q Consensus 382 ~~~n~~~p~~rDTv~v~~~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~~~~~~-----~P~-~~~~C~~~~~ 455 (463)
.. ...+|+|||||.|++++|++|||++||||.|+|||||++|++.|||++|.|+++++++ +|+ ..+.|..+..
T Consensus 427 ~~-~~~~p~~RDTv~V~pgg~v~IrF~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~~~~~~~~~~~p~~~~~~C~~~~~ 505 (534)
T 1zpu_A 427 PA-FPEYPMRRDTLYVRPQSNFVIRFKADNPGVWFFHCHIEWHLLQGLGLVLVEDPFGIQDAHSQQLSENHLEVCQSCSV 505 (534)
T ss_dssp CC-CCSSCEEESEEEECTTCEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHHHHHHCGGGSCCHHHHHHHHHTTC
T ss_pred cc-ccCCCCeeeEEEeCCCCEEEEEEEeCCCeeEEEEeCchhHhhcCCeEEEEECccccccccccCCChhHhhhhhccCC
Confidence 22 2468999999999999999999999999999999999999999999999999887754 344 4578888754
|
| >3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-75 Score=603.40 Aligned_cols=380 Identities=27% Similarity=0.498 Sum_probs=287.9
Q ss_pred ccccc-ccceeEEEeccchhhhhcceeeEEEEeCCCCC-CCCCCCC-cceEEEEeeeecccHHHHHhhhcCCCCCCCCCC
Q 012467 2 LDVWQ-VQAGTYFYHGHLGMQRSAGLYGSLIVDVADGE-KEPFHYD-GEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEP 78 (463)
Q Consensus 2 ~~~~~-~~~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~-~~p~~~d-~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~ 78 (463)
|+|.+ .|+||||||||.+.|+.+||+|+|||+++++. ..++++| +|++|+|+||+++...+. +. .+..+
T Consensus 95 Y~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~~~~l~l~Dw~~~~~~~~-------~~-~p~~~ 166 (499)
T 3pxl_A 95 YDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWYHTAAKLG-------PR-FPGGA 166 (499)
T ss_dssp EEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCTTTS-------CS-SCSSC
T ss_pred EEEEcCCCCceeeeeccchhHHhccceeEEEEcCCcccccccCCCCCceEEEEEEcccCCccccc-------cC-CCCCC
Confidence 78888 68999999999999999999999999988651 1234554 578999999999875421 11 14478
Q ss_pred CeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCccc
Q 012467 79 QTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYV 158 (463)
Q Consensus 79 d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v 158 (463)
|++||||++++.|.. ....+.++|++||+|||||||+|..+.+.|+|+||+|+|||+||.++
T Consensus 167 d~~liNG~~~~~~~~------------------~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via~DG~~~ 228 (499)
T 3pxl_A 167 DATLINGKGRAPSDS------------------VAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNS 228 (499)
T ss_dssp SEEEETTBCCCTTCT------------------TCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEE
T ss_pred cEEEECCCCcCCCCC------------------CCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEECCccc
Confidence 999999999875532 23446899999999999999999999999999999999999999999
Q ss_pred ceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCCC--CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccc
Q 012467 159 QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPA--TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSK 236 (463)
Q Consensus 159 ~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~~--~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~ 236 (463)
+|+.++.|.|++||||||+|++++ +.|+||||+.....+.. .....|+|+|.++.... +.+ +.........
T Consensus 229 ~P~~~~~l~i~pGqR~dvlv~~~~-~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~-p~~-----~~~~~~~~~~ 301 (499)
T 3pxl_A 229 QPLEVDSIQIFAAQRYSFVLDANQ-AVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVE-PTT-----NQTTSVKPLN 301 (499)
T ss_dssp EEEEESBEEECTTCEEEEEEECCS-CSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSC-CCC-----CCCCCSSBCC
T ss_pred CceEeeeEEECCCcEEEEEEECCC-CCceEEEEEecccCccccCCCceEEEEEeCCCCCCC-CCC-----CCCCCCcccc
Confidence 999999999999999999999998 56899999987544432 22357999998653221 111 1111111111
Q ss_pred cccccccccCCC--C--CCCCccceEEEEEeeeeccCCeEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCC
Q 012467 237 SFSNKIFALMGS--P--KPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNE 312 (463)
Q Consensus 237 ~~~~~~~~~~~~--~--~~p~~~d~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~ 312 (463)
...|.+.... + ..+..+|+++.+.+..+ + ..|+|||.+|..|+.|.|.+...+..... +
T Consensus 302 --~~~L~p~~~~~~p~~~~~~~~d~~~~l~~~~~---~-~~w~iNg~s~~~~~~P~L~~~~~g~~~~~-----------~ 364 (499)
T 3pxl_A 302 --EVDLHPLVSTPVPGAPSSGGVDKAINMAFNFN---G-SNFFINGASFVPPTVPVLLQILSGAQTAQ-----------D 364 (499)
T ss_dssp --GGGCCBSSCCCCSSCSSTTCSSEEEECCEEEC---S-SCEEETTBCCCCCSSCHHHHHHTTCCSTT-----------T
T ss_pred --cccccccccccCCCcccCCCCcEEEEEEEEec---C-cEEEEcCEecCCCCCchhhhhhcCCcccc-----------c
Confidence 1223332211 1 12235677777665432 2 27999999999999998876643221100 0
Q ss_pred cccCCCCCCCCccccceEEEccCCCEEEEEEE---eCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCC
Q 012467 313 YDVMKPPVNANTTLGSGVYMLGLNTTVDVILQ---NANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNP 389 (463)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~---N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p 389 (463)
......++.++.|++|+|+|+ |.+.+ .||||||||+|+||+.+ | ...+|+.||
T Consensus 365 -----------~~~~~~v~~~~~g~~V~ivl~~~~n~~~~------~HP~HLHGh~F~Vl~~~-g------~~~~n~~~P 420 (499)
T 3pxl_A 365 -----------LLPSGSVYVLPSNASIEISFPATAAAPGA------PHPFHLHGHTFAVVRSA-G------STVYNYDNP 420 (499)
T ss_dssp -----------SSSTTSEEEECTTCEEEEEEECCTTSCSC------SCEEEETTCCEEEEECT-T------CCCCCSSSC
T ss_pred -----------cCCCceeEEecCCCEEEEEEecCcccCCC------CccceecCCcEEEEecc-C------CcccccCCC
Confidence 011223789999999999999 44444 89999999999999864 2 234778999
Q ss_pred CccceEEeCC---CcEEEEEEEcCCceeeeecccchHhHHccceeeeecccccccc---CCCC-CccccCccc
Q 012467 390 PLKNTAVIFP---YGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGN---IPNQ-ALACGLTGK 455 (463)
Q Consensus 390 ~~rDTv~v~~---~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~~~~~~---~P~~-~~~C~~~~~ 455 (463)
+||||+.|++ |+|++|||+|||||.|+|||||++|++.||+++|+|+++++++ +|+. ...|..|+.
T Consensus 421 ~~rDtv~v~~~~pg~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~e~~~~~~~~~~~p~~~~~~C~~~~~ 493 (499)
T 3pxl_A 421 IFRDVVSTGTPAAGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFAVVMAEDTPDVKAVNPVPQAWSDLCPTYDA 493 (499)
T ss_dssp CEESEEECCCGGGTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEESGGGHHHHSCCCHHHHTHHHHHHT
T ss_pred CccceEEcCCcCCCcEEEEEEEcCCCceEEEEeCChhHhhCCCcEEEEEChhHhccccCCCHHHHHhhhHhhc
Confidence 9999999997 9999999999999999999999999999999999999998864 4544 579988764
|
| >3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-75 Score=600.70 Aligned_cols=382 Identities=27% Similarity=0.456 Sum_probs=287.3
Q ss_pred ccccc-ccceeEEEeccchhhhhcceeeEEEEeCCCCC-CCCCCCC-cceEEEEeeeecccHHHHHhhhcCCCCCCCCCC
Q 012467 2 LDVWQ-VQAGTYFYHGHLGMQRSAGLYGSLIVDVADGE-KEPFHYD-GEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEP 78 (463)
Q Consensus 2 ~~~~~-~~~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~-~~p~~~d-~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~ 78 (463)
|+|.+ .|+||||||||.+.|+.+||+|+|||+++++. ..++++| +|++|+|+||+++...++ . ... +..+
T Consensus 96 Y~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~-----~-~~~-p~~~ 168 (495)
T 3t6v_A 96 YNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDVDDDTTIITLADWYHVLAKEM-----G-AGG-AITA 168 (495)
T ss_dssp EEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCGGGS-----C-SSS-CCCC
T ss_pred EEEEeCCCCceeeeeccchhHHhcCceEEEEEcCccccccccCCCCCceeEEEEecccCCchhhh-----c-cCC-CCCC
Confidence 78888 68999999999999999999999999988651 1234553 578999999999876542 1 111 4478
Q ss_pred CeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCccc
Q 012467 79 QTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYV 158 (463)
Q Consensus 79 d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v 158 (463)
|++||||+++..|.. .....+.++|++||+|||||||+|+.+.+.|+|+||+|+|||+||.++
T Consensus 169 d~~liNG~g~~~~~~-----------------~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via~DG~~~ 231 (495)
T 3t6v_A 169 DSTLIDGLGRTHVNV-----------------AAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDS 231 (495)
T ss_dssp SEEEETTBCCBSSSC-----------------CCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEE
T ss_pred cEEEECCcCcCCCCc-----------------ccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEeCCccc
Confidence 999999998874431 022346899999999999999999999999999999999999999999
Q ss_pred ceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCCC--CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccc
Q 012467 159 QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPA--TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSK 236 (463)
Q Consensus 159 ~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~~--~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~ 236 (463)
+|+.++.|.|+|||||||+|++++ +.|+||||+.....+.. .....|+|+|.++.... +....+.. . .....
T Consensus 232 ~P~~~~~l~i~pGqR~dvlv~~~~-~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~-p~~~~~~~-~---~~~~~ 305 (495)
T 3t6v_A 232 QELTVDEIQIFAAQRYSFVLNANQ-PVGNYWIRANPNSGGEGFDGGINSAILRYDGATTAD-PVTVASTV-H---TKCLI 305 (495)
T ss_dssp EEEEESBEEECTTCEEEEEEECCS-CSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSC-CCCCCCSS-C---SSBCC
T ss_pred CCEEeeeEEEcCceEEEEEEECCC-CCceEEEEEecccCccccCCCceEEEEEECCCCCCC-CCCCCCCC-C---ccccc
Confidence 999999999999999999999998 56899999987544432 22357999998653321 11111100 0 00111
Q ss_pred cccccccccCCC--C--CCCCccceEEEEEeeeeccCCeEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCC
Q 012467 237 SFSNKIFALMGS--P--KPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNE 312 (463)
Q Consensus 237 ~~~~~~~~~~~~--~--~~p~~~d~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~ 312 (463)
...|.+.... + ..+..+|+++.+.+..+ + ..|+|||.+|..|+.|.|.+...+..... +
T Consensus 306 --~~~L~p~~~~~~p~~~~~~~~d~~~~l~~~~~---~-~~w~iNg~s~~~~~~P~L~~~~~g~~~~~-----------~ 368 (495)
T 3t6v_A 306 --ETDLHPLSRNGVPGNPHQGGADCNLNLSLGFA---C-GNFVINGVSFTPPTVPVLLQICSGANTAA-----------D 368 (495)
T ss_dssp --GGGCCBSSCCCCSSCSSTTCSSEEEECCEEEE---T-TEEEETTBCCCCCSSCHHHHHHTTCCSST-----------T
T ss_pred --cccccccccccCCCccCCCCCcEEEEEEEEec---C-cEEEEcCEecCCCCCcchhhhhcCCcCcc-----------c
Confidence 1123322211 1 12234677776665432 2 27999999999999898876643221100 0
Q ss_pred cccCCCCCCCCccccceEEEccCCCEEEEEEE-eCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCc
Q 012467 313 YDVMKPPVNANTTLGSGVYMLGLNTTVDVILQ-NANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPL 391 (463)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~-N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~ 391 (463)
......++.++.|++|+|+|+ |.+.+ .||||||||+|+||+.+ | ...+|+.||+|
T Consensus 369 -----------~~~~~~v~~~~~g~~V~ivl~~n~~~~------~HP~HLHGh~F~vl~~~-g------~~~~n~~~P~~ 424 (495)
T 3t6v_A 369 -----------LLPSGSVISLPSNSTIEIALPAGAAGG------PHPFHLHGHDFAVSESA-S------NSTSNYDDPIW 424 (495)
T ss_dssp -----------SSSTTSEEEECTTCEEEEEEECCSSSC------CCEEEETTCCEEEEECT-T------CCCCCSSSCCE
T ss_pred -----------ccCCcceEEecCCCEEEEEEccCCCCC------CcceeecCCcEEEEecC-C------CCCcccCCCCC
Confidence 011223789999999999999 55555 89999999999999864 2 23477889999
Q ss_pred cceEEeCC-CcEEEEEEEcCCceeeeecccchHhHHccceeeeecccccccc---CCCC-CccccCcc
Q 012467 392 KNTAVIFP-YGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGN---IPNQ-ALACGLTG 454 (463)
Q Consensus 392 rDTv~v~~-~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~~~~~~---~P~~-~~~C~~~~ 454 (463)
|||+.|++ |+|++|||+|||||.|+|||||++|++.||+++|+|+++++++ +|+. ...|..|.
T Consensus 425 rDtv~v~~~g~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~e~~~~~~~~~~~p~~~~~~C~~~~ 492 (495)
T 3t6v_A 425 RDVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVFAEDIPNTASANPVPEAWSNLCPSYD 492 (495)
T ss_dssp ESEEECCSTTCEEEEEEECCSCEEEEEEESCHHHHHTTCEEEEEETHHHHHHHCCCCHHHHHHHHHHH
T ss_pred ccEEEcCCCCcEEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEEChhHhccccCCCHHHHHHhhHhh
Confidence 99999997 8999999999999999999999999999999999999998864 4544 57897764
|
| >2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-74 Score=608.03 Aligned_cols=393 Identities=24% Similarity=0.390 Sum_probs=294.9
Q ss_pred cccccccceeEEEeccchhhhhcceeeEEEEeCCCCCCCCCCCCcce-EEEEeeeecccHHHHHhhhcCCCCCCCCCCCe
Q 012467 2 LDVWQVQAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEF-NLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQT 80 (463)
Q Consensus 2 ~~~~~~~~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~~~p~~~d~e~-~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~d~ 80 (463)
|+|.+.|+||||||||.+.|+++||+|+|||++++. ..||+|. +|+|+||+++...++..... . +. .+.+++
T Consensus 125 Y~f~~~q~GT~wYH~H~~~q~~~Gl~G~liV~~~~~----~~~d~d~~~l~l~Dw~~~~~~~~~~~~~-~-~~-~~~~d~ 197 (559)
T 2q9o_A 125 YRWRARQYGTSWYHSHFSAQYGNGVVGTIQINGPAS----LPYDIDLGVFPITDYYYRAADDLVHFTQ-N-NA-PPFSDN 197 (559)
T ss_dssp EEEECCSCEEEEEEECSTTGGGGTCEEEEEEECCCS----SCCSEEEEEEEEEEECSSCHHHHHHHHT-T-SC-CCCBSE
T ss_pred EEEECCCCEEEEEEEcccchhcCCceEEEEecCCCc----CCCcccceEEEEeccccCCHHHHhhhhh-c-CC-CCccce
Confidence 789999999999999999999999999999998754 4688887 99999999999887754332 1 11 457899
Q ss_pred EEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccce
Q 012467 81 LLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQP 160 (463)
Q Consensus 81 ~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P 160 (463)
+||||+..+.|.. ....+.++|++||+|||||||+|+.+.+.|+|+||+|+|||+||++++|
T Consensus 198 ~liNG~~~~~~~~------------------~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~p 259 (559)
T 2q9o_A 198 VLINGTAVNPNTG------------------EGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNA 259 (559)
T ss_dssp EEETTBCBCTTTC------------------CBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEE
T ss_pred eEECCccccCcCC------------------CCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEecCCcccCc
Confidence 9999999875542 1234589999999999999999999999999999999999999999999
Q ss_pred eeEeeEEecCCceEEEEEecCCCCCCceEEEEEe--cCCCC--CCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccc
Q 012467 161 FEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV--RGRKP--ATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSK 236 (463)
Q Consensus 161 ~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~--~~~~~--~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~ 236 (463)
+.++.|.|+|||||||+|++++ .+|+|||++.. ...|. ......|+|+|.++... .+.... .+. .+.....
T Consensus 260 ~~~~~l~l~pgeR~dvlv~~~~-~~g~y~i~a~~~~~~~~~~~~~~~~~ail~y~~~~~~-~P~~~~--~~~-~~~~~~~ 334 (559)
T 2q9o_A 260 MTVDSLFLAVGQRYDVVIDASR-APDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPGG-LPTDEG--TPP-VDHQCLD 334 (559)
T ss_dssp EEESCEEECTTCEEEEEEECCS-CSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSCCS-CCCCCC--CCC-CCCTTCC
T ss_pred eEeCeEEEccEEEEEEEEECCC-CCCcEEEEEEeccccccCCCCCCceeEEEEECCCCCC-CCCCCC--CcC-CCccccc
Confidence 9999999999999999999987 57899999987 43342 23456899999865321 111110 000 0100000
Q ss_pred cccccccccCCC--CCC--CCccceEEEEEeeeeccCCeEEEEEecccCCCC-CCCCccccccCCCCCCCCCCCCCCCCC
Q 012467 237 SFSNKIFALMGS--PKP--PTNFHRRLTLLNTQNTINGFTKWAINNVSLTLP-PTPYLGSIKYGLKDAFDQNGPPENFSN 311 (463)
Q Consensus 237 ~~~~~~~~~~~~--~~~--p~~~d~~~~~~~~~~~~~~~~~~~iNg~~~~~p-~~p~l~~~~~~~~~~~~~~~~p~~~~~ 311 (463)
. ..+.+..+. +.. ....+.++.+.... ...+...|+|||.+|..+ ..|.|.....+.. .|.
T Consensus 335 ~--~~l~p~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~~-~~~---------- 400 (559)
T 2q9o_A 335 T--LDVRPVVPRSVPVNSFVKRPDNTLPVALDL-TGTPLFVWKVNGSDINVDWGKPIIDYILTGNT-SYP---------- 400 (559)
T ss_dssp C--SCCCBSSCCBCCCTTCCCCGGGEEEEEEEC-SSSSSCEEEETTBCCCCCTTSCHHHHHHHTCC-CCC----------
T ss_pred c--cccccCCCCCCCCcccccceeEEEEEEeec-CCCceEEEEECCEecccCCCCCcHhHhhcCCc-cCC----------
Confidence 0 112221111 111 11223455544321 112346899999999764 6777765543221 120
Q ss_pred CcccCCCCCCCCccccceEEEccC-CCEEEEEEEeCC----CCCCCCCCCCCeeecCCceEEEeecC---------CCCC
Q 012467 312 EYDVMKPPVNANTTLGSGVYMLGL-NTTVDVILQNAN----AIRPNLSEIHPWHLHGHDFWVLGRGE---------GKFT 377 (463)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~-g~~v~~vl~N~~----~~~~~~~~~HP~HlHG~~f~vl~~g~---------g~~~ 377 (463)
.+..++.++. +++++|+++|.+ .+ .||||||||+|+||+++. |.|+
T Consensus 401 --------------~~~~~~~~~~~~~v~~~vi~n~~~~~~~~------~HP~HLHGh~F~Vl~~g~~~~~~~~~~g~~~ 460 (559)
T 2q9o_A 401 --------------VSDNIVQVDAVDQWTYWLIENDPEGPFSL------PHPMHLHGHDFLVLGRSPDVPAASQQRFVFD 460 (559)
T ss_dssp --------------GGGCEEEECCSSCEEEEEEEECTTSSCCC------CEEEEESSSCEEEEEESCCCCTTSCCCCCCC
T ss_pred --------------CCceEEEcCCCCEEEEEEEeCCCccccCC------CCcEEECCCceEEEecccccccccccccccC
Confidence 1123466664 578888999865 45 899999999999999987 7777
Q ss_pred cc-ccccCCCCCCCccceEEeCCCcEEEEEEEcCCceeeeecccchHhHHccceeeeeccccccccC-----CC-CCccc
Q 012467 378 KE-DEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNI-----PN-QALAC 450 (463)
Q Consensus 378 ~~-~~~~~n~~~p~~rDTv~v~~~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~~~~~~~-----P~-~~~~C 450 (463)
+. ++..+|+.+|+|||||.|++++|++|||+|||||.|||||||++|++.|||++|+|++++++++ |. ..+.|
T Consensus 461 ~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~adNPG~W~~HCHil~H~~~GM~~~~~v~~~~~~~~~~~~~p~~~~~~C 540 (559)
T 2q9o_A 461 PAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLERPADLRQRISQEDEDDFNRVC 540 (559)
T ss_dssp HHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHHHHGGGCCHHHHHHHHHHH
T ss_pred ccccccccccCCCCccceEEccCCccEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEECcchhhhccccCCchhhhhhc
Confidence 54 4567899999999999999999999999999999999999999999999999999999888753 43 46899
Q ss_pred cCcccCCC
Q 012467 451 GLTGKRFM 458 (463)
Q Consensus 451 ~~~~~~~~ 458 (463)
+.|+.+..
T Consensus 541 ~~~~~~~~ 548 (559)
T 2q9o_A 541 DEWRAYWP 548 (559)
T ss_dssp HHHHHHGG
T ss_pred cccccccc
Confidence 99988543
|
| >1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-74 Score=599.20 Aligned_cols=389 Identities=28% Similarity=0.472 Sum_probs=285.6
Q ss_pred cccc-cccceeEEEeccchhhhhcceeeEEEEeCCCCCCCCCCC--C-cceEEEEeeeecccHHHHHhhhcCCCCCCCCC
Q 012467 2 LDVW-QVQAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHY--D-GEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGE 77 (463)
Q Consensus 2 ~~~~-~~~~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~~~p~~~--d-~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~ 77 (463)
|+|. +.|+||||||||.+.|+++||+|+|||+++++ +.+..| | +|++|+|+||+++...++... .... .+.
T Consensus 116 Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~-~~~~~~~~d~~e~~l~l~D~~~~~~~~~~~~---~~~~-~~~ 190 (521)
T 1v10_A 116 YDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPND-PHLSLYDVDDASTVITIADWYHSLSTVLFPN---PNKA-PPA 190 (521)
T ss_dssp EEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTC-TTGGGCSBCSGGGEEEEEEECSSCCC----------CC-CSC
T ss_pred EEEecCCCCccEEEEeccCCchhcCceEEEEEcCCcc-cccccCCCCCceeEEEEcccccCCHHHHhhc---cCCC-CCC
Confidence 7788 57999999999999999999999999999864 223334 3 699999999999987765421 1111 356
Q ss_pred CCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcc
Q 012467 78 PQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNY 157 (463)
Q Consensus 78 ~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~ 157 (463)
+|++||||++.++|.. .....+.++|++|++|||||||+|+.+.+.|+|+||+|+|||+||++
T Consensus 191 ~d~~liNG~~~~~~~~-----------------~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~ 253 (521)
T 1v10_A 191 PDTTLINGLGRNSANP-----------------SAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVS 253 (521)
T ss_dssp CSEEEETTBCCCSSCG-----------------GGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEE
T ss_pred CCEEEECCcccCCCCC-----------------CCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEecCCcc
Confidence 8999999999876641 12234689999999999999999999999999999999999999999
Q ss_pred cceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCCC--CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCccc
Q 012467 158 VQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPA--TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHS 235 (463)
Q Consensus 158 v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~~--~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~ 235 (463)
++|+.++.+.|+|||||||+|++++ ++|+|||++.....+.. .....|+|+|+++.... +.. +.+ .....
T Consensus 254 ~~p~~~~~l~l~pgqR~dvlv~~~~-~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~-p~~-----~~~-~~~~~ 325 (521)
T 1v10_A 254 HQPLTVDSLTIFAGQRYSVVVEANQ-AVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAE-PTT-----SQN-SGTAL 325 (521)
T ss_dssp EEEEEESBEEECTTCEEEEEEECCS-CSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSCC-CCC-----CCC-CSCBC
T ss_pred ccceeeeeEEEcccceEEEEEEcCC-CCCceeeeeccccccccCCCCceeEEEEECCCCCCC-CCC-----CCC-ccccc
Confidence 9999999999999999999999987 56899999987643321 12346999998654321 111 111 00000
Q ss_pred ccccccccccCC--CCC--CCCccceEEEEEeeeeccCCeEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCC
Q 012467 236 KSFSNKIFALMG--SPK--PPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSN 311 (463)
Q Consensus 236 ~~~~~~~~~~~~--~~~--~p~~~d~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~ 311 (463)
.. ..+.+... .+. .+...++++.+....+ +....|+|||++|..+..|.|.+...+... +.
T Consensus 326 ~~--~~l~p~~~~~~p~~~~~~~~~~~~~l~~~~~--~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~-------~~---- 390 (521)
T 1v10_A 326 NE--ANLIPLINPGAPGNPVPGGADINLNLRIGRN--ATTADFTINGAPFIPPTVPVLLQILSGVTN-------PN---- 390 (521)
T ss_dssp CG--GGCCBSSCCCCSSCSSTTCSSEEEECCEECC--SSSSCCEESSCCCCCCSSCHHHHHHHTCCC-------GG----
T ss_pred ch--hhcccCCcccCCCcccCCcceEEEEEEEecC--CceeEEEECCCcccCCCCchhhhhhcCCcc-------cc----
Confidence 00 12222211 111 1123455554443221 122369999999998888877665422110 00
Q ss_pred CcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCc
Q 012467 312 EYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPL 391 (463)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~ 391 (463)
++ +.+..++.++.|++|+|+|+| .+ .||||||||+|+||+++.+. .+|+.+|.|
T Consensus 391 ~~-----------~~~~~~~~v~~g~~vei~l~N--~~------~HP~HLHGh~F~Vl~~~~~~-------~~n~~~p~~ 444 (521)
T 1v10_A 391 DL-----------LPGGAVISLPANQVIEISIPG--GG------NHPFHLHGHNFDVVRTPGSS-------VYNYVNPVR 444 (521)
T ss_dssp GS-----------SSTTTEEEECTTCEEEEEEEC--CB------SCEEEESSCCEEEEECTTCS-------CCCCSSCCE
T ss_pred cC-----------CCCceEEEecCCCEEEEEEcC--CC------CCCEEEccceEEEEecCCCC-------ccccCCCCe
Confidence 00 112346899999999999999 45 89999999999999997543 256789999
Q ss_pred cceEEe-CCCcEEEEEEEcCCceeeeecccchHhHHccceeeeecccccccc---CC-CCCccccCcccCCCCCC
Q 012467 392 KNTAVI-FPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGN---IP-NQALACGLTGKRFMNPK 461 (463)
Q Consensus 392 rDTv~v-~~~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~~~~~~---~P-~~~~~C~~~~~~~~~~~ 461 (463)
||||.| ++++|++|||++||||.|+|||||++|++.|||++|.++++++++ +| ...+.|+.|+.+....|
T Consensus 445 rDTV~V~p~gg~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~v~~~~~~~~~~~p~~~~~~C~~~~~~~~~~~ 519 (521)
T 1v10_A 445 RDVVSIGGGGDNVTFRFVTDNPGPWFLHCHIDWHLEAGLAVVFAEDIPNIPIANAISPAWDDLCPKYNANNPDSG 519 (521)
T ss_dssp ESEEECCBSSCEEEEEEECCSCEEEEEEESCHHHHTTTCEEEEEESGGGHHHHSCCCHHHHTHHHHHTTCC----
T ss_pred eeeEEeCCCCcEEEEEEEeCCCeeEEEeeChHHHHhCCCeEEEEECCcchhhccCCChHHhhhchhhhccCCCcC
Confidence 999999 899999999999999999999999999999999999999887753 45 34789999988765443
|
| >1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-73 Score=592.00 Aligned_cols=379 Identities=28% Similarity=0.521 Sum_probs=284.1
Q ss_pred cccc-cccceeEEEeccchhhhhcceeeEEEEeCCCCCCCCCCC--C-cceEEEEeeeecccHHHHHhhhcCCCCCCCCC
Q 012467 2 LDVW-QVQAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHY--D-GEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGE 77 (463)
Q Consensus 2 ~~~~-~~~~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~~~p~~~--d-~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~ 77 (463)
|+|. +.++||||||||.+.|+++||+|+|||+++++ +.+..| | +|++|+|+||+++...++. . .+.
T Consensus 95 Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~-~~~~~~~~d~~e~~l~l~Dw~~~~~~~~~------~---~~~ 164 (503)
T 1hfu_A 95 YKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDND-PHAALYDEDDENTIITLADWYHIPAPSIQ------G---AAQ 164 (503)
T ss_dssp EEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTTC-TTGGGCSBCSTTSEEEEEEECSSCGGGCC------------C
T ss_pred EEEEeCCCCccEEEEecchhhhhCcceeeEEEcCCCC-CcccCCCCCCceEEEEEcccccCChHHhc------C---CCC
Confidence 7788 57899999999999999999999999999864 223334 3 6999999999999876531 1 146
Q ss_pred CCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcc
Q 012467 78 PQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNY 157 (463)
Q Consensus 78 ~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~ 157 (463)
+|.+||||++.++|.. ....+.++|++|++|||||||+|+.+.+.|+|+||+|+|||+||++
T Consensus 165 ~d~~liNG~~~~~~~~------------------~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~ 226 (503)
T 1hfu_A 165 PDATLINGKGRYVGGP------------------AAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGEL 226 (503)
T ss_dssp CSEEEETTBCCBTTCC------------------CCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEE
T ss_pred CCEEEECcccccCCCC------------------CCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEeccCcc
Confidence 8999999999876642 2234689999999999999999999999999999999999999999
Q ss_pred cceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCC------CCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCC
Q 012467 158 VQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP------ATPPALTLLNYHPTSASKIPLSPPPITPRWDD 231 (463)
Q Consensus 158 v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~------~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~ 231 (463)
++|+.+++|.|+|||||||+|++++ ++|+|||++.....+. ......|+|+|.++....+.... .|....
T Consensus 227 ~~p~~~~~l~l~pgeR~dvlv~~~~-~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~---~~~~~~ 302 (503)
T 1hfu_A 227 TEPHTVDRLQIFTGQRYSFVLDANQ-PVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSA---NPNPAQ 302 (503)
T ss_dssp EEEEEESBEEECTTCEEEEEEECCS-CSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCCCC---CSSCCB
T ss_pred ccccccCeEEEcccceEEEEEEcCC-CccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCCCC---CCccCC
Confidence 9999999999999999999999987 5689999998653321 11234799999865432111111 111111
Q ss_pred CcccccccccccccCC--CCC--CCCccceEEEEEeeeeccCCeEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCC
Q 012467 232 YDHSKSFSNKIFALMG--SPK--PPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPE 307 (463)
Q Consensus 232 ~~~~~~~~~~~~~~~~--~~~--~p~~~d~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~ 307 (463)
. .. ..+.+... .+. .+...+.++.+....+ +. .|+|||++|..+..|.|.+...+... +.
T Consensus 303 l---~~--~~l~p~~~~~~p~~~~~~~~~~~~~l~~~~~---~~-~~~iNg~~~~~~~~P~l~~~~~g~~~-------~~ 366 (503)
T 1hfu_A 303 L---NE--ADLHALIDPAAPGIPTPGAADVNLRFQLGFS---GG-RFTINGTAYESPSVPTLLQIMSGAQS-------AN 366 (503)
T ss_dssp C---CG--GGCBBSSSCSCSSCSSTTCSSEEEECCEEEE---TT-EEEETTBCCCCCSSCHHHHHHTTCCS-------GG
T ss_pred C---cc--ccccccCccCCCCcccCCcceEEEEEEeecc---Cc-eEEECCCccCCCCCcchhhhhcCCcc-------cc
Confidence 1 00 12222211 111 1123455554443221 22 79999999998888887765422110 00
Q ss_pred CCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEe-CCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCC
Q 012467 308 NFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQN-ANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNL 386 (463)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N-~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~ 386 (463)
+ .+.+..++.++.|++|+|+++| .+.+ .||||||||+|+||+++.+. .+|+
T Consensus 367 ----~-----------~~~~~~~~~v~~g~~vei~l~~n~~~~------~HP~HLHGh~F~Vl~~~~~~-------~~n~ 418 (503)
T 1hfu_A 367 ----D-----------LLPAGSVYELPRNQVVELVVPAGVLGG------PHPFHLHGHAFSVVRSAGSS-------TYNF 418 (503)
T ss_dssp ----G-----------SSSTTSEEEECSSCEEEEEEECCSTTC------CCEEEETTCCEEEEECTTCC-------CCCC
T ss_pred ----c-----------CCCCceEEEccCCCEEEEEEECCCCCC------CCCEEEecceEEEEecCCCC-------cccc
Confidence 0 0112346899999999999995 4445 89999999999999997543 2567
Q ss_pred CCCCccceEEe-CCCcEEEEEEEcCCceeeeecccchHhHHccceeeeecccccccc---CC-CCCccccCcccC
Q 012467 387 KNPPLKNTAVI-FPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGN---IP-NQALACGLTGKR 456 (463)
Q Consensus 387 ~~p~~rDTv~v-~~~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~~~~~~---~P-~~~~~C~~~~~~ 456 (463)
.+|.|||||.| ++++|++|||++||||.|+|||||++|++.|||++|.++++++++ +| ...+.|+.|+.+
T Consensus 419 ~~p~~rDTV~V~ppg~~v~irf~adnPG~W~~HCHil~H~~~GM~~~~~v~~~~~~~~~~~p~~~~~~C~~~~~~ 493 (503)
T 1hfu_A 419 VNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMANTVDANNPPVEWAQLCEIYDDL 493 (503)
T ss_dssp SSBCEESEEECCSTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECHHHHHHHCCCCHHHHHHHHHHHTC
T ss_pred CCCCeeeeEEecCCCceEEEEEEcCCCeeeeEecCchhHhhCCCeEEEEECchhhhhccCCChHHhhhccchhhc
Confidence 89999999999 999999999999999999999999999999999999999887753 45 347899998765
|
| >2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-67 Score=535.53 Aligned_cols=319 Identities=26% Similarity=0.325 Sum_probs=244.6
Q ss_pred ccccc--ccceeEEEeccc----hhhhhcceeeEEEEeCCCCCCCCCCCCcceEEEEeeeecccHHHHHhhhcCCCCCCC
Q 012467 2 LDVWQ--VQAGTYFYHGHL----GMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWI 75 (463)
Q Consensus 2 ~~~~~--~~~GT~WYHsH~----~~q~~~Gl~G~lIV~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~ 75 (463)
|+|.+ .++||||||||. +.|+.+||+|+|||+++++......+++|++|+|+||+++... ... .........
T Consensus 97 Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~~~~~e~~l~l~D~~~~~~~-~~~-~~~~~~~~g 174 (439)
T 2xu9_A 97 YEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDAIPELREAEEHLLVLKDLALQGGR-PAP-HTPMDWMNG 174 (439)
T ss_dssp EEEECCSSCCEEEEEECCCTTSHHHHHHTTCCEEEEECCGGGGSHHHHTSEEEEEEEEEECEETTE-ECC-CCHHHHHHC
T ss_pred EEEecCCCCCcceEeccCCCCchHHHHHhhCeEEEEEcCccccCccCCCCCcEEEEEEeeeeCCCC-cCC-CCccccccC
Confidence 67775 479999999995 7899999999999998764211234689999999999998631 100 000000002
Q ss_pred CCCCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCC
Q 012467 76 GEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADG 155 (463)
Q Consensus 76 ~~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG 155 (463)
..++.++|||+..+ .++|++| +|||||||+|+.+.+.|+|+||+|+|||+||
T Consensus 175 ~~~~~~~iNG~~~p---------------------------~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG 226 (439)
T 2xu9_A 175 KEGDLVLVNGALRP---------------------------TLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIAADG 226 (439)
T ss_dssp CCCSEEEETTEESC---------------------------EEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEEETT
T ss_pred CCCCEEEECCccCC---------------------------cEEecCC-eEEEEEEecCCCceEEEEECCceEEEEecCC
Confidence 35789999999764 7999999 9999999999999999999999999999999
Q ss_pred ccc-ceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCC-----------------CCCCeEEEEEeCCCCCCC
Q 012467 156 NYV-QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP-----------------ATPPALTLLNYHPTSASK 217 (463)
Q Consensus 156 ~~v-~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~-----------------~~~~~~a~l~y~~~~~~~ 217 (463)
+++ +|+.++++.|+|||||||+|++++ +|+|||++.....+. .....+++|+|.+....
T Consensus 227 ~~~~~p~~~~~l~l~pgeR~dv~v~~~~--~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~- 303 (439)
T 2xu9_A 227 GFLEEPLEVSELLLAPGERAEVLVRLRK--EGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPKP- 303 (439)
T ss_dssp EEEEEEEEESCEEECTTCEEEEEEECCS--SEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCCC-
T ss_pred CCCCCceEeceEEECCceeEEEEEEcCC--CceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCCcc-
Confidence 997 899999999999999999999987 588999987543321 11246788999754311
Q ss_pred CCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeeeeccCCeEEEEEecccCCCCCCCCccccccCCC
Q 012467 218 IPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLK 297 (463)
Q Consensus 218 ~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~ 297 (463)
.+.|.. +....+.+. + ..++++.+..... + ..|+|||.+|..+.
T Consensus 304 ---~~~p~~---------------l~~~~~l~~-~-~~~r~~~l~~~~~---g-~~~~iNg~~~~~~~------------ 347 (439)
T 2xu9_A 304 ---LPLPKA---------------LSPFPTLPA-P-VVTRRLVLTEDMM---A-ARFFINGQVFDHRR------------ 347 (439)
T ss_dssp ---CCCCSC---------------CCCCCCCCC-C-SEEEEEEEEEEGG---G-TEEEETTBCCCTTC------------
T ss_pred ---ccCccc---------------CCCcccCCC-C-CcceEEEEEeecc---C-ceEeECCEECCCCC------------
Confidence 111110 000001111 1 2246776665431 1 26999999885321
Q ss_pred CCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCC
Q 012467 298 DAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFT 377 (463)
Q Consensus 298 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~ 377 (463)
. .+.++.|++++|+|+|.+.+ .||||||||+||||+++.+.+
T Consensus 348 -------~------------------------~~~~~~g~~~~~~~~N~~~~------~HP~HLHG~~F~Vl~~~g~~~- 389 (439)
T 2xu9_A 348 -------V------------------------DLKGQAQTVEVWEVENQGDM------DHPFHLHVHPFQVLSVGGRPF- 389 (439)
T ss_dssp -------C------------------------CEEECTTCEEEEEEEECSSS------CEEEEESSCCBEEEEETTEEC-
T ss_pred -------C------------------------ceecCCCCEEEEEEEcCCCC------CCCceeCCCcEEEEeeCCCCC-
Confidence 0 16789999999999999877 999999999999999975543
Q ss_pred ccccccCCCCCCCccceEEeCCCcEEEEEEEcCCceeeeecccchHhHHccceeeeecc
Q 012467 378 KEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALG 436 (463)
Q Consensus 378 ~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~ 436 (463)
.+|.|||||.|++++|++|||++||||.|+|||||++|++.|||++|.++
T Consensus 390 ---------~~p~~rDTv~v~p~~~v~i~f~adnpG~w~~HCHil~H~~~GMm~~~~Vg 439 (439)
T 2xu9_A 390 ---------PYRAWKDVVNLKAGEVARLLVPLREKGRTVFHCHIVEHEDRGMMGVLEVG 439 (439)
T ss_dssp ---------SSCCCBSEEEECTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEEC
T ss_pred ---------CCCCCeEEEEeCCCCEEEEEEEcCCCCCEEEECCcchhhhcCCcEEEEeC
Confidence 36899999999999999999999999999999999999999999999764
|
| >3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-65 Score=523.20 Aligned_cols=321 Identities=21% Similarity=0.308 Sum_probs=243.7
Q ss_pred cccccc-cceeEEEecc----chhhhhcceeeEEEEeCCCCCCCCCCCC-cceEEEEeeeecccHHHHHhhhcC-CCCCC
Q 012467 2 LDVWQV-QAGTYFYHGH----LGMQRSAGLYGSLIVDVADGEKEPFHYD-GEFNLLLSDWWHRSVHEQEVGLSS-RPLRW 74 (463)
Q Consensus 2 ~~~~~~-~~GT~WYHsH----~~~q~~~Gl~G~lIV~~~~~~~~p~~~d-~e~~l~l~D~~~~~~~~~~~~~~~-~~~~~ 74 (463)
|+|.+. ++|||||||| ++.|+++||+|+|||+++++. .++.|| +|++|+|+||+++. .++.. +.. .....
T Consensus 89 Y~f~~~~~~GT~wYH~H~~~~~~~q~~~Gl~G~liV~~~~~~-~~l~~d~~e~~l~l~D~~~~~-~~~~~-~~~~~~~~~ 165 (448)
T 3aw5_A 89 YSFDVVNRAGTYLYHPHPHGLTAKQFYMGQLGLVIVEDSGSD-LGFKYGVNDLPLVISDRRFIG-GAPVY-NPTPMEMIA 165 (448)
T ss_dssp EEEECCSCSEEEEEEECCTTTHHHHHHTTCCEEEEEECTTTT-TTCCBTTTEEEEEEEEEEEET-TEEEC-CCCHHHHHH
T ss_pred EEEEcCCCCCceEeccCCCCchHHHHhccceEEEEEeCCccc-cCCCCCCceEEEEEEeeccCC-Ccccc-ccccccccc
Confidence 788888 7999999999 999999999999999998763 344677 89999999999987 55432 100 00001
Q ss_pred CCCCCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEE--eC---ceeE
Q 012467 75 IGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAV--KN---HKMV 149 (463)
Q Consensus 75 ~~~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i--~~---h~~~ 149 (463)
...++.+||||+..+ .++|++| +|||||||+|+.+.+.|+| ++ |+|+
T Consensus 166 ~~~~~~~liNG~~~p---------------------------~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~ 217 (448)
T 3aw5_A 166 GFLGNAVLVNGVKDA---------------------------VFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMR 217 (448)
T ss_dssp CCCCSEEEETTEETC---------------------------EEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEE
T ss_pred CccccEEEECCcccc---------------------------eEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEE
Confidence 246899999999864 7999999 9999999999999999999 99 9999
Q ss_pred EEEeCCcccc-eeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCC-------------CCCCeEEEEEeCCCCC
Q 012467 150 VVEADGNYVQ-PFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP-------------ATPPALTLLNYHPTSA 215 (463)
Q Consensus 150 via~DG~~v~-P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~-------------~~~~~~a~l~y~~~~~ 215 (463)
|||+||++++ |..++.+.|+|||||||+|++++ +.|||++.....+. .....+++|+|.+...
T Consensus 218 via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~---~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (448)
T 3aw5_A 218 LIAVDQGFLARPIEVRALFLAPAERAEVVVELGE---GVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGE 294 (448)
T ss_dssp EEEETTEEEEEEEEESCEEECTTCEEEEEEEECS---EEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECC
T ss_pred EEEeCCCccCCceEeceEEECCcceEEEEEECCC---CceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCC
Confidence 9999999998 99999999999999999999984 58999997654321 1134567888864322
Q ss_pred CCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeeeeccCCeEEEEEecccCCCCCCCCccccccC
Q 012467 216 SKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYG 295 (463)
Q Consensus 216 ~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~ 295 (463)
.. . +..++. + +....+...++++.+.... ..|+|||++|..+.
T Consensus 295 ~~--~--p~~L~~-------------l----p~~~~~~~~~~~~~l~~~~------~~~~iNg~~~~~~~---------- 337 (448)
T 3aw5_A 295 AV--P--VEALSD-------------P----PPEPPKPTRTRRFALSLSG------MQWTINGMFWNASN---------- 337 (448)
T ss_dssp CC--C--CCCCSC-------------C----CCCCCCCSEEEEEEEEEET------TEEEETTBCCCTTC----------
T ss_pred CC--C--ccccCC-------------C----CCCCCCCCceEEEEEeCCC------ceeeECCCcCCCCC----------
Confidence 11 0 000000 0 0011223446666665421 25999999885321
Q ss_pred CCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEE-ccCCCEEEEEEEeCC-CCCCCCCCCCCeeecCCceEEEeecC
Q 012467 296 LKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYM-LGLNTTVDVILQNAN-AIRPNLSEIHPWHLHGHDFWVLGRGE 373 (463)
Q Consensus 296 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~v~~vl~N~~-~~~~~~~~~HP~HlHG~~f~vl~~g~ 373 (463)
| .+. ++.|++|+|+|+|.+ .+ .||||||||+||||+++
T Consensus 338 ----------p-----------------------~~~~~~~g~~v~~~i~N~~~~~------~HP~HLHG~~F~Vl~~~- 377 (448)
T 3aw5_A 338 ----------P-----------------------LFEHVSVEGVELWEIVNDKASM------PHPMHLHGFPMWIIERK- 377 (448)
T ss_dssp ----------T-----------------------TCCCEEECEEEEEEEEECSSSC------CEEEEESSSCBEEEEEE-
T ss_pred ----------C-----------------------ceeccCCCCeEEEEEEcCCCCC------CcCEEECCceEEEEEec-
Confidence 1 134 688999999999987 66 89999999999999984
Q ss_pred CCCCcc-ccccCC----CCCCCccceEEeCCCcEEEEE--EE---cCCceeeeecccchHhHHccceeeeec
Q 012467 374 GKFTKE-DEKKFN----LKNPPLKNTAVIFPYGWTALR--FV---ADNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 374 g~~~~~-~~~~~n----~~~p~~rDTv~v~~~g~~~ir--f~---adnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
|.+... +...++ ..++.|||||.|+++++++|+ |+ +||| |+|||||++|++.|||++|.+
T Consensus 378 G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp--w~~HCHil~H~d~GMm~~~~V 447 (448)
T 3aw5_A 378 DSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQL--FPFHCHNLEHEDGGMMINIAV 447 (448)
T ss_dssp SCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTCE--EEEEESSHHHHHTTCEEEEEE
T ss_pred CCCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccCCCCc--EEEEcCChHHHhCCCceEEEe
Confidence 555321 222222 234579999999999999665 99 9999 999999999999999999865
|
| >2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-65 Score=523.77 Aligned_cols=322 Identities=17% Similarity=0.154 Sum_probs=242.2
Q ss_pred Cccccccc-ceeEEEeccc----hhhhhcceeeEEEEeCCCCCCC--CCCC-CcceEEEEeeeecccHHHHHhhhcCCCC
Q 012467 1 MLDVWQVQ-AGTYFYHGHL----GMQRSAGLYGSLIVDVADGEKE--PFHY-DGEFNLLLSDWWHRSVHEQEVGLSSRPL 72 (463)
Q Consensus 1 ~~~~~~~~-~GT~WYHsH~----~~q~~~Gl~G~lIV~~~~~~~~--p~~~-d~e~~l~l~D~~~~~~~~~~~~~~~~~~ 72 (463)
.|+|.+.+ +||||||||. +.|+++||+|+|||+++++... |..| |+|++|+|+||+++...++.... ...
T Consensus 100 ~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~p~~y~~~e~~l~l~D~~~~~~~~~~~~~--~~~ 177 (451)
T 2uxt_A 100 APVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPEYNE--PGS 177 (451)
T ss_dssp CCEEECCSCSEEEEEEECCTTTHHHHHHTTCEEEEEEECHHHHHSSSCCCBTTTEEEEEEEEEEECTTSCEECCC--CSS
T ss_pred EEEEEcCCCCcceEEecCCCCchhhhHhhcceEEEEEecCcccccCCCccCCCceEEEEEEeeecCCCCceeccc--ccC
Confidence 38888886 9999999996 8999999999999999865322 3455 78999999999998776543221 111
Q ss_pred CCCCCCCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEE-eCceeEEE
Q 012467 73 RWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAV-KNHKMVVV 151 (463)
Q Consensus 73 ~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i-~~h~~~vi 151 (463)
. ...++.+||||+..+ .++|++| +|||||||+|+.+.+.|+| +||+|+||
T Consensus 178 ~-~~~~d~~liNG~~~p---------------------------~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi 228 (451)
T 2uxt_A 178 G-GFVGDTLLVNGVQSP---------------------------YVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVI 228 (451)
T ss_dssp S-CCCCSEEEETTEESC---------------------------EEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEE
T ss_pred C-CCcCCEEEECCcccc---------------------------eEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEE
Confidence 1 457899999999875 7999999 9999999999999999999 89999999
Q ss_pred EeCCccc-ceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCC----------CCCCeEEEEEeCCCCCCCCCC
Q 012467 152 EADGNYV-QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP----------ATPPALTLLNYHPTSASKIPL 220 (463)
Q Consensus 152 a~DG~~v-~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~----------~~~~~~a~l~y~~~~~~~~~~ 220 (463)
|+||+++ +|..++.+.|+|||||||+|++++ +++|||++.....+. ......++++|..........
T Consensus 229 ~~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~ 306 (451)
T 2uxt_A 229 SGDQGFLPAPVSVKQLSLAPGERREILVDMSN--GDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLVT 306 (451)
T ss_dssp ECSSSEEEEEEEESSEEECTTCEEEEEEECTT--CCCEEEEC----------------CCCCSCCEEEEEEECSCCC---
T ss_pred EeCCCccCCceEeceEEECceeEEEEEEEeCC--CCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcCcc
Confidence 9999998 899999999999999999999996 578999986543221 112345788887432211111
Q ss_pred CCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeeeeccCCeEEEEEecccCCCCCCCCccccccCCCCCC
Q 012467 221 SPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAF 300 (463)
Q Consensus 221 ~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~ 300 (463)
. ..|. .|.+... .+.+...++++.+. + .|+|||.+|..+.
T Consensus 307 ~---~~p~------------~L~~~~~-~~~~~~~~~~~~l~-------~--~~~iNg~~f~~~~--------------- 346 (451)
T 2uxt_A 307 D---SLPM------------RLLPTEI-MAGSPIRSRDISLG-------D--DPGINGQLWDVNR--------------- 346 (451)
T ss_dssp ----CCCS------------CSSSSCC-CCCCCSEEEEEEEC-------S--SSSBTTBCCCTTC---------------
T ss_pred c---cCcc------------ccCCCCC-CCCCCcceEEEEEe-------e--EEEECCEeCCCCC---------------
Confidence 1 1111 1111111 11122233444332 1 5889999875321
Q ss_pred CCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccc
Q 012467 301 DQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKED 380 (463)
Q Consensus 301 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~ 380 (463)
+ .+.++.|++|+|+|+|. + .||||||||+|+||+++ |.
T Consensus 347 -----~-----------------------~~~~~~G~~~~~~l~N~--~------~HP~HLHGh~F~Vl~~~-G~----- 384 (451)
T 2uxt_A 347 -----I-----------------------DVTAQQGTWERWTVRAD--E------PQAFHIEGVMFQIRNVN-GA----- 384 (451)
T ss_dssp -----C-----------------------CEEEETTCEEEEEEEEE--E------EEEEEETTCEEEEEEET-TB-----
T ss_pred -----C-----------------------cEEcCCCCEEEEEEECC--C------CcCeEECCceEEEEeeC-Cc-----
Confidence 0 16789999999999997 4 89999999999999985 32
Q ss_pred cccCCCCCCCccceEEeCCCcEEEEEEEcCCcee----eeecccchHhHHccceeeeeccccccc
Q 012467 381 EKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGA----WAFHCHIEPHFHIGMGVVLALGVETVG 441 (463)
Q Consensus 381 ~~~~n~~~p~~rDTv~v~~~g~~~irf~adnpG~----w~~HCHi~~H~~~GM~~~~~~~~~~~~ 441 (463)
.+++.+|.|||||.| +++++|+|++||||. |||||||++|++.|||++|.+.+.++.
T Consensus 385 --~~~~~~p~~rDTv~v--g~~~~i~~~~dnpg~~~g~w~~HCHil~H~d~GMm~~~~v~~~~~~ 445 (451)
T 2uxt_A 385 --MPFPEDRGWKDTVWV--DGQVELLVYFGQPSWAHFPFYFNSQTLEMADRGSIGQLLVNPVPRS 445 (451)
T ss_dssp --CCCGGGSSCBSEEEE--EEEEEEEEECCSCCBTTBCEEEEESSHHHHHTTCEEEEEEECSCC-
T ss_pred --CCCcccCCCccEEEE--CCEEEEEEEeCCCCCCCCceEEeCCchhHHhCCCcEEEEEccCccc
Confidence 134567899999999 999999999999988 999999999999999999998776553
|
| >3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-64 Score=524.29 Aligned_cols=333 Identities=19% Similarity=0.216 Sum_probs=242.3
Q ss_pred ccccccc-ceeEEEeccc----hhhhhcceeeEEEEeCCCCCCCCCC--C-CcceEEEEeeeecccHHHHHhhhcCCCCC
Q 012467 2 LDVWQVQ-AGTYFYHGHL----GMQRSAGLYGSLIVDVADGEKEPFH--Y-DGEFNLLLSDWWHRSVHEQEVGLSSRPLR 73 (463)
Q Consensus 2 ~~~~~~~-~GT~WYHsH~----~~q~~~Gl~G~lIV~~~~~~~~p~~--~-d~e~~l~l~D~~~~~~~~~~~~~~~~~~~ 73 (463)
|+|.+.| +||||||||+ +.|+++||+|+|||+++++...++. | +.|++|+|+||+++...++.... +..
T Consensus 120 Y~f~~~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~~~~~d~~l~l~d~~~~~~g~~~~~~---~~~ 196 (534)
T 3abg_A 120 YYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNLPSGYGEFDIPMILTSKQYTANGNLVTTN---GEL 196 (534)
T ss_dssp EEECCCSSSCEEEEEECCTTCHHHHHHTBCEEEEEEECTTTTTSCTTCCHHHHSCCEEEEEECBCSSSCBCCCT---TCS
T ss_pred EEEecCCcceeEEEecCccccchhhhhhcceEEEEEECCcccccCCCccCCcceEEEEEeeeeecCCCceeccC---CCC
Confidence 7888876 6899999995 5689999999999999876433332 3 67899999999998765543221 111
Q ss_pred CCCCCCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeC-------c
Q 012467 74 WIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKN-------H 146 (463)
Q Consensus 74 ~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~-------h 146 (463)
....+|.+||||+..+ .+.|++ ++|||||||||+.+.+.|+|++ |
T Consensus 197 ~~~~gd~~lvNG~~~p---------------------------~~~v~~-~~~RlRliNa~~~~~~~l~i~~~~~~~~~h 248 (534)
T 3abg_A 197 NSFWGDVIHVNGQPWP---------------------------FKNVEP-RKYRFRFLDAAVSRSFGLYFADTDAIDTRL 248 (534)
T ss_dssp SCCCCSEEEETTEESC---------------------------BCBCCS-SEEEEEEEECCSSCCEEEEECCSSSTTCCC
T ss_pred ccccCceeccCCccCc---------------------------eEEecC-cEEEEEEEecCCcceEEEEEecccCcCCCc
Confidence 1236899999999765 578888 5999999999999999999987 9
Q ss_pred eeEEEEeCCcc-cceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecC-CCC----CCCCeEEEEEeCCCCCCCCCC
Q 012467 147 KMVVVEADGNY-VQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRG-RKP----ATPPALTLLNYHPTSASKIPL 220 (463)
Q Consensus 147 ~~~via~DG~~-v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~-~~~----~~~~~~a~l~y~~~~~~~~~~ 220 (463)
+|+|||+||++ ++|+.++.|.|+|||||||+|++++.++.+|||++.... .+. ......++++|........+
T Consensus 249 ~~~vIa~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~- 327 (534)
T 3abg_A 249 PFKVIASDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQP- 327 (534)
T ss_dssp CEEEEEETTEEEEEEEEESCEEECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCS-
T ss_pred cEEEEEeCCCcccCceEeceEEECCccEEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCC-
Confidence 99999999985 589999999999999999999999843346999975321 121 11234588888643221000
Q ss_pred CCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeeeeccCCeEEEEEecccCCCCCCCCccccccCCCCCC
Q 012467 221 SPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAF 300 (463)
Q Consensus 221 ~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~ 300 (463)
.....|. .+.+.. .+.++...++++.+... + ..|+|||.+|..+..|.
T Consensus 328 -~~~~~P~------------~L~~~~-~p~~~~~~~~~~~~~~~----~--~~w~iNG~~f~~~~~p~------------ 375 (534)
T 3abg_A 328 -DTSVVPA------------NLRDVP-FPSPTTNTPRQFRFGRT----G--PTWTINGVAFADVQNRL------------ 375 (534)
T ss_dssp -CCCCCCC------------CCCCCS-CCCCCCCCCEEEECSCC----C--STTCCCCBTTBCTTSCC------------
T ss_pred -CCCCCcc------------ccccCC-CCCCccccceEEEEecc----C--ceeEECCcccCCCCCcc------------
Confidence 0000110 111111 01122234555544221 1 25899999986432221
Q ss_pred CCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCC-CCCCCCCCCCeeecCCceEEEeecCCCCCcc
Q 012467 301 DQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANA-IRPNLSEIHPWHLHGHDFWVLGRGEGKFTKE 379 (463)
Q Consensus 301 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~-~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~ 379 (463)
...++.|++++|+|+|.+. + .||||||||+|+||+++.|.+.
T Consensus 376 -----------------------------l~~v~~G~~~~w~i~N~~~~~------~HP~HLHG~~F~Vl~~~~g~~~-- 418 (534)
T 3abg_A 376 -----------------------------LANVPVGTVERWELINAGNGW------THPIHIHLVDFKVISRTSGNNA-- 418 (534)
T ss_dssp -----------------------------CCEECTTCEEEEEEEECSSSC------CCCEEESSCCEEEEEESSCCSS--
T ss_pred -----------------------------eeeccCCCEEEEEEEcCCCCC------CcCEEECCeeEEEEEEcCCCCc--
Confidence 1467899999999999763 4 8999999999999999766432
Q ss_pred ccccCCCCCCCccceEEeCCCcEEEEEEE-cCCceeeeecccchHhHHccceeeeeccc
Q 012467 380 DEKKFNLKNPPLKNTAVIFPYGWTALRFV-ADNPGAWAFHCHIEPHFHIGMGVVLALGV 437 (463)
Q Consensus 380 ~~~~~n~~~p~~rDTv~v~~~g~~~irf~-adnpG~w~~HCHi~~H~~~GM~~~~~~~~ 437 (463)
....++.+ .|||||.|+++++++|||+ +||||.|+|||||++|++.|||+.|.+..
T Consensus 419 -~~~~~~~~-~~rDTV~v~pg~~v~I~~~~adnpG~w~~HCHil~H~d~GMm~~~~V~~ 475 (534)
T 3abg_A 419 -RTVMPYES-GLKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATV 475 (534)
T ss_dssp -SCCCSGGG-SCBSEECCCSSEEEEEEEECCSCCEEEEEEESCHHHHHTTCEEEEEECS
T ss_pred -CcCCcccc-CCcCeEEcCCCCEEEEEEEECCCCccEEEecChHHHHhcCCceEEEEEe
Confidence 11234445 8999999999999999998 99999999999999999999999996654
|
| >2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-63 Score=517.16 Aligned_cols=340 Identities=18% Similarity=0.215 Sum_probs=242.7
Q ss_pred cccccc-cceeEEEeccc----hhhhhcceeeEEEEeCCCCCCCCC-CCCcceEEEEeeeecccHHHHHhhhcC------
Q 012467 2 LDVWQV-QAGTYFYHGHL----GMQRSAGLYGSLIVDVADGEKEPF-HYDGEFNLLLSDWWHRSVHEQEVGLSS------ 69 (463)
Q Consensus 2 ~~~~~~-~~GT~WYHsH~----~~q~~~Gl~G~lIV~~~~~~~~p~-~~d~e~~l~l~D~~~~~~~~~~~~~~~------ 69 (463)
|+|.+. ++||||||||+ +.|+++||+|+|||+++++.+.++ .+|+|++|+|+||+++...++......
T Consensus 139 Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~d~d~~l~l~D~~~~~~~~~~~~~~~~~~~~~ 218 (513)
T 2wsd_A 139 YHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEKRLKLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPS 218 (513)
T ss_dssp EEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGGGGGCCCCGGGEEEEEEEEEEECTTSCEECCSSCSSCCTT
T ss_pred EEEecCCCccceEECCCCCCcchhhhhccCeEEEEEeccccccccCCCCCCcEEEEEEeeecCCCCceeccccccccccc
Confidence 678775 79999999995 369999999999999986532222 458999999999999877655332110
Q ss_pred ---CCCCCCCCCCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCc
Q 012467 70 ---RPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNH 146 (463)
Q Consensus 70 ---~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h 146 (463)
........++.+||||+..+ .+.|++ ++|||||||+|+.+.+.|+|++|
T Consensus 219 ~~~~~~~~~~~~d~~liNG~~~p---------------------------~~~v~~-~~~RlRliNa~~~~~~~~~i~~~ 270 (513)
T 2wsd_A 219 LPNPSIVPAFCGETILVNGKVWP---------------------------YLEVEP-RKYRFRVINASNTRTYNLSLDNG 270 (513)
T ss_dssp SCSSCCCSCCCCSEEEETTEESC---------------------------EEECCS-SEEEEEEEECCSSCCEEEEETTC
T ss_pred ccccccccccccceEEECCcccc---------------------------eEEecC-CEEEEEEEccCCcceEEEEECCC
Confidence 00001346899999999875 688988 58999999999999999999999
Q ss_pred -eeEEEEeCCccc-ceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCC---CCCCeEEEEEeCCCCCCCCCCC
Q 012467 147 -KMVVVEADGNYV-QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP---ATPPALTLLNYHPTSASKIPLS 221 (463)
Q Consensus 147 -~~~via~DG~~v-~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~---~~~~~~a~l~y~~~~~~~~~~~ 221 (463)
+|+|||+||+++ +|+.++.|.|+|||||||+|++++. .|+ +++......|. ......++|+|..+.....+.
T Consensus 271 ~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~-~g~-~~~l~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~- 347 (513)
T 2wsd_A 271 GDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAY-EGE-SIILANSAGCGGDVNPETDANIMQFRVTKPLAQKD- 347 (513)
T ss_dssp CCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGG-TTC-EEEEEECCCSSSSCCTTTTTEEEEEECCSCCSSCC-
T ss_pred CeEEEEccCCCcccCceEeCeEEECCeeeEEEEEECCCC-CCc-EEEEEecccccccCCCCCCcceEEEEeccCcccCc-
Confidence 999999999998 8999999999999999999999873 455 33333322221 122345788887432111000
Q ss_pred CCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeeeeccCCeEEEEEecccCCCCCCCCccccccCCCCCCC
Q 012467 222 PPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFD 301 (463)
Q Consensus 222 ~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~ 301 (463)
....|. .+......+..+...++++.+...... .+...|+|||.+|..+.
T Consensus 348 -~~~~p~------------~l~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~~iNg~~~~~~~---------------- 397 (513)
T 2wsd_A 348 -ESRKPK------------YLASYPSVQHERIQNIRTLKLAGTQDE-YGRPVLLLNNKRWHDPV---------------- 397 (513)
T ss_dssp -CCCCCS------------BCSCCGGGCCCCEEEEEEEEEEEEECT-TSCEEEEETTBCTTSCC----------------
T ss_pred -cCCCCc------------cccCCCCcccCCCcceEEEEEEeecCC-CCCceEeECCccCCCcc----------------
Confidence 001111 000000001111234566665544322 24457899999874320
Q ss_pred CCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCC---CCCc
Q 012467 302 QNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEG---KFTK 378 (463)
Q Consensus 302 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g---~~~~ 378 (463)
.+.++.|++|+|+|+|.+.+ .||||||||+|+||+++.+ .|+.
T Consensus 398 ----------------------------~~~~~~g~~~~w~l~N~~~~------~HP~HlHG~~F~Vl~~~~~~~~~~~~ 443 (513)
T 2wsd_A 398 ----------------------------TETPKVGTTEIWSIINPTRG------THPIHLHLVSFRVLDRRPFDIARYQE 443 (513)
T ss_dssp ----------------------------CBCCBTTCEEEEEEEECSSS------CEEEEESSCCEEEEEEEEBCHHHHHH
T ss_pred ----------------------------cEecCCCCEEEEEEEcCCCC------CcCEeEeCceEEEEEecCcccccccc
Confidence 14568999999999998876 9999999999999998652 1211
Q ss_pred cccccCCCC---------CCCccceEEeCCCcEEEEEEEc-CCceeeeecccchHhHHccceeeeecccc
Q 012467 379 EDEKKFNLK---------NPPLKNTAVIFPYGWTALRFVA-DNPGAWAFHCHIEPHFHIGMGVVLALGVE 438 (463)
Q Consensus 379 ~~~~~~n~~---------~p~~rDTv~v~~~g~~~irf~a-dnpG~w~~HCHi~~H~~~GM~~~~~~~~~ 438 (463)
. ..+|+. ++.|||||.|+++++++|+|++ +|||.|+|||||++|++.|||+.|.+.++
T Consensus 444 ~--~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil~H~~~GMm~~~~V~~~ 511 (513)
T 2wsd_A 444 S--GELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHALEHEDYDMMRPMDITDP 511 (513)
T ss_dssp H--CCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEESCHHHHTTTCEEEEEEBCC
T ss_pred c--ccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCCCEEEEcCChhhhhcCCceeEEEeCC
Confidence 0 122233 3459999999999999999888 89999999999999999999999987653
|
| >3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-61 Score=516.91 Aligned_cols=374 Identities=18% Similarity=0.189 Sum_probs=229.1
Q ss_pred ccccccc-ceeEEEecc----chhhhhcceeeEEEEeCCCCCCCCC-CCCcceEEEEeeeecccHHHHHhhhc-------
Q 012467 2 LDVWQVQ-AGTYFYHGH----LGMQRSAGLYGSLIVDVADGEKEPF-HYDGEFNLLLSDWWHRSVHEQEVGLS------- 68 (463)
Q Consensus 2 ~~~~~~~-~GT~WYHsH----~~~q~~~Gl~G~lIV~~~~~~~~p~-~~d~e~~l~l~D~~~~~~~~~~~~~~------- 68 (463)
|+|.+.| +|||||||| ++.|+++||+|+|||+++++...++ .+|+|++|+|+||+++...+......
T Consensus 157 Y~f~~~q~~GT~WYHsH~~g~t~~q~~~Gl~G~liI~d~~~~~~~~p~~d~e~~lvl~Dw~~~~~~~~~~~~~~~~~~~~ 236 (612)
T 3gyr_A 157 SEYPNDHQATQWWYHDHAMNITRWNVMAGLYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVI 236 (612)
T ss_dssp EEECCCSCSEEEEEEECCTTTHHHHTTTTCEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEE
T ss_pred EEEEcCCCCceEEEeeCCCCcchhhhhccceeEEEEcCccccccCCCCCCccEEEEEEEEecccccccccccccccCCcc
Confidence 7787775 699999999 4899999999999999987644443 35899999999999876544321110
Q ss_pred --CC------CCCCCCCCCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEE
Q 012467 69 --SR------PLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLN 140 (463)
Q Consensus 69 --~~------~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~ 140 (463)
.. .......++.++|||+..+ .+.|++ ++|||||||||+.+.+.
T Consensus 237 ~~~~~~~~~~~~~~~~~gd~~~vNG~~~p---------------------------~~~v~~-~~yRlRliNas~~~~~~ 288 (612)
T 3gyr_A 237 VQQSNPETGKPVSIPFFGPYTTVNGRIWP---------------------------YADVDD-GWYRLRLVNASNARIYN 288 (612)
T ss_dssp EESSCSSSSCCEECCCCCSEEEETTEESC---------------------------EEEEES-SEEEEEEEECCSSCCEE
T ss_pred ccccCCCCCCccccCccCceeeecCCccc---------------------------eEeccC-cEEEEEEEeccCCccee
Confidence 00 0001235788999998764 677765 68999999999999999
Q ss_pred EEEeCc-------eeEEEEeCCccc-ceeeE------eeEEecCCceEEEEEecCCCCCCce-EEEEEecCCCC------
Q 012467 141 LAVKNH-------KMVVVEADGNYV-QPFEV------DDMDIYSGESYSVLLTTNQDPSYNY-WISAGVRGRKP------ 199 (463)
Q Consensus 141 ~~i~~h-------~~~via~DG~~v-~P~~~------~~l~i~~GeR~dvlV~~~~~~~g~y-~ir~~~~~~~~------ 199 (463)
|+|++| +|+|||+||+++ +|+.+ +.|.|+|||||||||++++. .+.+ +++......+.
T Consensus 289 l~i~~h~~~~~~~~~~vIa~DG~~l~~Pv~v~~p~~~~~l~i~pGeRydVlV~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 367 (612)
T 3gyr_A 289 LVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPAERFDLLVDFRAL-GGRRLRLVDKGPGAPAGTPDPL 367 (612)
T ss_dssp EEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTTCEEEEEEECTTC-TTCEEEEEECCTTSCTTSCBGG
T ss_pred EEEccCCCccCCceEEEEEeCCCccccceeccCcccccEEEeccceEEEEEEECCCC-CceEEEEEecCCcCCcCccCcc
Confidence 999998 499999999998 46655 47999999999999999984 4444 44433222221
Q ss_pred CCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeeeec--cCCeEEEEEe
Q 012467 200 ATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNT--INGFTKWAIN 277 (463)
Q Consensus 200 ~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~--~~~~~~~~iN 277 (463)
......++++|.............|........... ...+ ...+...+...... ......|.+.
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~-------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (612)
T 3gyr_A 368 GGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMS-------------HDIP-HGHRLIVLTPPGTKGSGGHPEIWEMA 433 (612)
T ss_dssp GTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCC-------------TTSC-CEEEEEEEECTTCTTTTTCCEEEEEE
T ss_pred ccccccceeeecccCCCCCCcccccccccccccccc-------------cccc-cccccccccccccccccccccccccc
Confidence 112234555554322211111111111000000000 0000 00000100000000 0001111111
Q ss_pred cccCCCC-CCCCccccc-cCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCCCCCCC
Q 012467 278 NVSLTLP-PTPYLGSIK-YGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSE 355 (463)
Q Consensus 278 g~~~~~p-~~p~l~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~~~ 355 (463)
....... ..+...... ....+ .+..+ ... .........+.++.|++|+|+|+|.+.+
T Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~----~~n-----~~~~~~~~~~~~~~g~~~~w~i~N~~~~------ 492 (612)
T 3gyr_A 434 EVEDPADVQVPAEGVIQVTGADG------RTKTY----RRT-----ARTFNDGLGFTIGEGTHEQWTFLNLSPI------ 492 (612)
T ss_dssp ECC-----CCSCTTEEEEECTTS------CEEEE----EEE-----ECSTTSCCCEEEETTCEEEEEEEECSSS------
T ss_pred cccccccccccccceeeeccCCC------ccccc----ccc-----CccCCCCcceEeCCCCEEEEEEEcCCCC------
Confidence 1110000 000000000 00000 00000 000 0000011237889999999999999877
Q ss_pred CCCeeecCCceEEEeecCCCCCcc----------------ccccCCCCCCCccceEEeCCCcEEEEEEE-cCCceeeeec
Q 012467 356 IHPWHLHGHDFWVLGRGEGKFTKE----------------DEKKFNLKNPPLKNTAVIFPYGWTALRFV-ADNPGAWAFH 418 (463)
Q Consensus 356 ~HP~HlHG~~f~vl~~g~g~~~~~----------------~~~~~n~~~p~~rDTv~v~~~g~~~irf~-adnpG~w~~H 418 (463)
.||||||||+||||+++.+.+... .....+..++.|||||.|+++++++|||+ +||||.||||
T Consensus 493 ~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~H 572 (612)
T 3gyr_A 493 LHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYH 572 (612)
T ss_dssp CEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEE
T ss_pred CcCEeECCCcEEEEeecCCcCccccccccccccccccccccccCcccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEc
Confidence 999999999999999865433221 12345667889999999999999999998 8999999999
Q ss_pred ccchHhHHccceeeeeccccc
Q 012467 419 CHIEPHFHIGMGVVLALGVET 439 (463)
Q Consensus 419 CHi~~H~~~GM~~~~~~~~~~ 439 (463)
|||++|++.|||+.|.+.+.+
T Consensus 573 CHil~Hed~GMM~~f~V~~p~ 593 (612)
T 3gyr_A 573 CHLLEHEDMGMMRPFVVMPPE 593 (612)
T ss_dssp ESSHHHHHTTCEEEEEEECHH
T ss_pred CCChHHHhCcCCcceEEeCCc
Confidence 999999999999999876543
|
| >3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-60 Score=489.29 Aligned_cols=322 Identities=24% Similarity=0.330 Sum_probs=233.2
Q ss_pred ccccccc--ceeEEEecc----chhhhhcceeeEEEEeCCCCCCCCCCCCcceEEEEeeeecccHHHHHhh-hcCCCCCC
Q 012467 2 LDVWQVQ--AGTYFYHGH----LGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVG-LSSRPLRW 74 (463)
Q Consensus 2 ~~~~~~~--~GT~WYHsH----~~~q~~~Gl~G~lIV~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~~~~~-~~~~~~~~ 74 (463)
|+|.+.| +|||||||| ++.|+++||+|+|||+++++ .++++++++ |+|+||+++...++... ......
T Consensus 133 Y~f~~~~~~~GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~~~--~~~~~~~~~-l~l~D~~~~~~g~~~~~~~~~~~~-- 207 (481)
T 3zx1_A 133 YRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKD--ALSHLKEKD-LMISDLRLDENAQIPNNNLNDWLN-- 207 (481)
T ss_dssp EEEECCTTCCEEEEEECCCTTTHHHHHHTTCCEEEEEECSSC--TTTTSEEEE-EEEEEECCBTTSCCCCCCHHHHHH--
T ss_pred EEEeCCCCCCceEEEeecCCCcchhhhhccceEEEEEcCccc--cccCCCcee-EEEEEEeccCCCccccccchhhcc--
Confidence 7788776 899999999 48999999999999999865 234555665 99999999876543200 000000
Q ss_pred CCCCCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeC
Q 012467 75 IGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEAD 154 (463)
Q Consensus 75 ~~~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~D 154 (463)
...++.+||||+..+ .++|++|+ ||||||+|+.+.+.|+|++|+|+|||+|
T Consensus 208 g~~gd~~lvNG~~~p---------------------------~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vIa~D 258 (481)
T 3zx1_A 208 GREGEFVLINGQFKP---------------------------KIKLATNE--RIRIYNATAARYLNLRIQGAKFILVGTD 258 (481)
T ss_dssp CCCCSEEEETTEESC---------------------------EEEEETTE--EEEEEECCSSCCEEEEETTCEEEEEEET
T ss_pred CCcCCEEEECCccCc---------------------------eEEecCCC--EEEEEecCCCeEEEEEECCCceEEEEcC
Confidence 236799999999764 79999998 9999999999999999999999999999
Q ss_pred Cccc-ceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCC----CCCCeEEEEEeCCCCCCCCCCCCCCCCCCC
Q 012467 155 GNYV-QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP----ATPPALTLLNYHPTSASKIPLSPPPITPRW 229 (463)
Q Consensus 155 G~~v-~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~----~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~ 229 (463)
|+++ +|+.++.|.|+|||||||+|++++ .+.|.|.+....... .....+.++++...... ... |.
T Consensus 259 Gg~~~~P~~~~~l~l~pgeR~dvlv~~~~--~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~----~~l---P~- 328 (481)
T 3zx1_A 259 GGLIEKTIYKEELFLSPASRVEVLIDAPK--DGNFKLESAYYDRDKMMVKEEPNTLFLANINLKKEN----VEL---PK- 328 (481)
T ss_dssp TEEEEEEEEESSEEECTTCEEEEEEECSS--CEEEEEEECCCCCCCSSCCCCCCCEEEEEEEEECCC----CCC---CS-
T ss_pred CCccCCceEeCeEEECCccEEEEEEEcCC--CcEEEEEEecccccCccccCCCCceeEEEEecCCCC----ccC---Cc-
Confidence 8765 899999999999999999999986 578988875433211 11223334433311110 111 11
Q ss_pred CCCcccccccccccccCCCCCCCCccceEEEEEeeeeccC-----Ce--------EEEEEecccCCCCCCCCccccccCC
Q 012467 230 DDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTIN-----GF--------TKWAINNVSLTLPPTPYLGSIKYGL 296 (463)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~-----~~--------~~~~iNg~~~~~p~~p~l~~~~~~~ 296 (463)
.+.+... .+.+ ..++++.+........ +. ..|+|||..|..
T Consensus 329 -----------~l~~~~~-~~~~-~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~------------- 382 (481)
T 3zx1_A 329 -----------NLKIFKP-SEEP-KEFKEIIMSEDHMQMHGMMGKSEGELKIALASMFLINRKSYDL------------- 382 (481)
T ss_dssp -----------CSCCCCC-CCCC-CEEEEEEEEECCSTTTTGGGCCHHHHHHHHHTTEEETTBCCCT-------------
T ss_pred -----------cccCCCC-CCCC-CcEEEEEEeccchhcccccccccccccccccceeEECCEeCCC-------------
Confidence 0111110 1111 2455555543221000 00 139999987742
Q ss_pred CCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeec-CCC
Q 012467 297 KDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRG-EGK 375 (463)
Q Consensus 297 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g-~g~ 375 (463)
..+ .+.++.|++|+|+|.|.+.+ .|||||||+.|+|+++. +|.
T Consensus 383 ------~~~------------------------~~~~~~G~~v~w~l~N~~~~------~Hp~HlHG~~F~vl~~~~~g~ 426 (481)
T 3zx1_A 383 ------KRI------------------------DLSSKLGVVEDWIVINKSHM------DHPFHIHGTQFELISSKLNGK 426 (481)
T ss_dssp ------TCC------------------------CEEEETTCCEEEEEEECSSS------CEEEEETTCCEEEEEEEETTE
T ss_pred ------CCc------------------------eEEeCCCCEEEEEEEcCCCC------ceeEEEeccEEEEEEecccCC
Confidence 111 17889999999999998877 99999999999999983 222
Q ss_pred CCccccccCCCCCCCccceEEeCCCcEEEEEEEcCCceeeeecccchHhHHccceeeeecc
Q 012467 376 FTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALG 436 (463)
Q Consensus 376 ~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~ 436 (463)
. ....++.|||||.|+|+++++|+|++||||.|+||||+++|++.|||+.|.+.
T Consensus 427 ~-------~~~~~~~~kDTv~v~Pg~~~~i~~~~d~pG~w~~HCHil~H~d~GMm~~~~V~ 480 (481)
T 3zx1_A 427 V-------QKAEFRALRDTINVRPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGNLEVK 480 (481)
T ss_dssp E-------EECSSCCEESEEEECTTCEEEEEECCCSCEEEEEEESSHHHHHTTCEEEEEEE
T ss_pred C-------CCcccCcccceEEECCCCEEEEEEEcCCCeeEEEEcCChHHHhcCCceEEEEe
Confidence 1 11234689999999999999999999999999999999999999999999764
|
| >3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-59 Score=480.50 Aligned_cols=329 Identities=20% Similarity=0.281 Sum_probs=229.7
Q ss_pred ccccccc-ceeEEEeccc----hhhhhcceeeEEEEeCCCCCC--CCCCC-CcceEEEEeeeecccHHHHHhhhcCCCCC
Q 012467 2 LDVWQVQ-AGTYFYHGHL----GMQRSAGLYGSLIVDVADGEK--EPFHY-DGEFNLLLSDWWHRSVHEQEVGLSSRPLR 73 (463)
Q Consensus 2 ~~~~~~~-~GT~WYHsH~----~~q~~~Gl~G~lIV~~~~~~~--~p~~~-d~e~~l~l~D~~~~~~~~~~~~~~~~~~~ 73 (463)
|+|.+.| +||||||||. +.|+++||+|+|||+++++.. .|..| ++|++|+|+||+++...++..........
T Consensus 99 Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~y~~~d~~lvl~D~~~~~~g~~~~~~~~~~~~ 178 (488)
T 3od3_A 99 VTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQIDYQLDVMTAA 178 (488)
T ss_dssp EEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHHHHTTCCCCCBTTTEEEEEEEEECBCTTSSBCCCCSHHHHH
T ss_pred EEEecCCCceeEEEEecCCCcchhhhhccceeEEEEcCccccccCCcccCCccceeEEEEEeeecCCCceeccccccccc
Confidence 7788876 7999999994 789999999999999986532 23345 36999999999998765432211000000
Q ss_pred CCCCCCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEE-eCceeEEEE
Q 012467 74 WIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAV-KNHKMVVVE 152 (463)
Q Consensus 74 ~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i-~~h~~~via 152 (463)
....+|.+||||+..+ .+.+ +|++|||||||+|+.+.+.|+| +||+|+|||
T Consensus 179 ~g~~gd~~lvNG~~~p---------------------------~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~vIa 230 (488)
T 3od3_A 179 VGWFGDTLLTNGAIYP---------------------------QHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYVIA 230 (488)
T ss_dssp HCCCCSEEEETTBSSC---------------------------EEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEEEE
T ss_pred cCCCCCEEEEcCCcCc---------------------------cEec-CCCEEEEEEEccCCCceeeeeecCCCeEEEEE
Confidence 0236799999999865 4555 5789999999999999999999 699999999
Q ss_pred eCCccc-ceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCC----CCCCeEEEEEeCCCCCCCCCCCCCCCCC
Q 012467 153 ADGNYV-QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP----ATPPALTLLNYHPTSASKIPLSPPPITP 227 (463)
Q Consensus 153 ~DG~~v-~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~----~~~~~~a~l~y~~~~~~~~~~~~~p~~p 227 (463)
+||+++ +|+.++.|.|+|||||||+|++++ .+.|+|++....... .......+++....... .....|.
T Consensus 231 ~DG~~l~~P~~~~~l~l~pGeR~dvlv~~~~--~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~P~-- 304 (488)
T 3od3_A 231 SDGGLLPEPVKVSELPVLMGERFEVLVEVND--NKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAIS--ASGALPD-- 304 (488)
T ss_dssp ETTEEEEEEEEESCEEECTTCEEEEEEEECT--TCCEEEEECCCSSTTTTSTTTTSCEEEEEEEEEEEE--CCCCCCS--
T ss_pred eCCCcccCccEeceEEECCCCEEEEEEEeCC--CceEEEEEeccCCCCcccccccCccceeEecccccC--CCCCCCc--
Confidence 999986 899999999999999999999996 578999876443221 01122233333211000 0000110
Q ss_pred CCCCCcccccccccccccCCCCCCCCccceEEEEEeeee-------------------cc----------CC--------
Q 012467 228 RWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQN-------------------TI----------NG-------- 270 (463)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~-------------------~~----------~~-------- 270 (463)
.|......+......++++.+.+... .+ .|
T Consensus 305 -------------~L~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g 371 (488)
T 3od3_A 305 -------------TLSSLPALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHG 371 (488)
T ss_dssp -------------CCCCCCCCCCCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCC
T ss_pred -------------ccccCCCCcccccccceEEEEEecccccccccccccccccccccccccccccccccccCcccccccc
Confidence 00000000111122356666543100 00 01
Q ss_pred --e---EEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEe
Q 012467 271 --F---TKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQN 345 (463)
Q Consensus 271 --~---~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N 345 (463)
. ..|.|||.+|... + | .+.++.|++++|.|.|
T Consensus 372 ~~~~~~~~~~ING~~~~~~-------------------~-~-----------------------~~~~~~G~~e~w~l~N 408 (488)
T 3od3_A 372 GKFDFHHANKINGQAFDMN-------------------K-P-----------------------MFAAAKGQYERWVISG 408 (488)
T ss_dssp GGGCGGGCEEETTBCCCTT-------------------C-C-----------------------SEECCBSSCEEEEEEC
T ss_pred ccccccceeeECCeeCCCC-------------------C-C-----------------------ceEcCCCCEEEEEEEe
Confidence 0 1378998877421 0 1 1788999999999999
Q ss_pred CC-CCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcC----Cceeeeeccc
Q 012467 346 AN-AIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD----NPGAWAFHCH 420 (463)
Q Consensus 346 ~~-~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~ad----npG~w~~HCH 420 (463)
.+ .+ .|||||||+.|+|++++..... ..++.|||||.|+ |+++.|+|+++ +||.||||||
T Consensus 409 ~~~~~------~Hp~HlHg~~F~Vl~~~g~~~~--------~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~~G~~m~HCH 473 (488)
T 3od3_A 409 VGDMM------LHPFHIHGTQFRILSENGKPPA--------AHRAGWKDTVKVE-GNVSEVLVKFNHDAPKEHAYMAHCH 473 (488)
T ss_dssp TTCCC------CEEEEETTCCBEEEEBTTBCCC--------GGGSSSBSEEEES-SSEEEEEECBCSCCCGGGCEEEEES
T ss_pred CCCCC------CccEEEcCceEEEeccCCCccc--------cccCCceeEEEeC-CCEEEEEEEeccCCCCCCCEEEeCC
Confidence 87 45 8999999999999998533221 1235799999999 99999999974 5789999999
Q ss_pred chHhHHccceeeeec
Q 012467 421 IEPHFHIGMGVVLAL 435 (463)
Q Consensus 421 i~~H~~~GM~~~~~~ 435 (463)
+++|++.|||+.|.+
T Consensus 474 ~l~Hed~GMm~~f~V 488 (488)
T 3od3_A 474 LLEHEDTGMMLGFTV 488 (488)
T ss_dssp SHHHHHTTCEEEEEC
T ss_pred chHHHhcCCcEEEEC
Confidence 999999999999864
|
| >2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-38 Score=324.66 Aligned_cols=322 Identities=15% Similarity=0.093 Sum_probs=194.1
Q ss_pred cccccccceeEEEeccchhhhhcceeeEEEEeCCCCCCCCCCCC------cceEEEEeeeecccHHHHHhh--hcCCCCC
Q 012467 2 LDVWQVQAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYD------GEFNLLLSDWWHRSVHEQEVG--LSSRPLR 73 (463)
Q Consensus 2 ~~~~~~~~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~~~p~~~d------~e~~l~l~D~~~~~~~~~~~~--~~~~~~~ 73 (463)
|+|.+.++||||||||...|+.+||+|.|||+++.......+++ .+++..+ |+.......+... .......
T Consensus 100 ~~f~~~~~Gt~~y~~~~~~h~~~Gm~G~i~V~~~~~~~~~~~~~~~~~~~~~~p~~~-d~~~~~~~~~~l~~~~~~~~~~ 178 (447)
T 2dv6_A 100 FSFVASKVGEFNYYCSIAGHRQAGMEGNIQVLPGNRAEMKSSGADITRDPADLPGPI-GPRQAKTVRIDLETVEVKGQLD 178 (447)
T ss_dssp EEEECCSCEEEEEECCSTTHHHHTCEEEEEEESSCCCCCCCSSBCCBCCTTCSCCCC-CSCCCCEEEEEEEEEEEEEEEE
T ss_pred EEEEcCCCEEEEEEeCCCChhhCCCEEEEEEeCCccccCCCcchhhccChhhcCCcc-ccCCCcEEEEEEEEEEEEEecc
Confidence 56777889999999999899999999999999876421110110 1111111 1111000000000 0000000
Q ss_pred CCCCCCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCc-ceEEEEEEeCceeEEEE
Q 012467 74 WIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTA-LASLNLAVKNHKMVVVE 152 (463)
Q Consensus 74 ~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~-~~~~~~~i~~h~~~via 152 (463)
-....+..++||+.. .++|++++|++|||||+|++. ...+.++++| + ++
T Consensus 179 ~g~~~~~~~~NG~~p--------------------------gp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg--~--~~ 228 (447)
T 2dv6_A 179 DNTTYTYWTFNGKVP--------------------------GPFLRVRVGDTVELHLKNHKDSLMVHSVDFHG--A--TG 228 (447)
T ss_dssp TTEEEEEEEETTBBS--------------------------CCCEEEETTCEEEEEEEECTTCSSCBCCEETT--C--CS
T ss_pred CCceeEEEEECCccC--------------------------CCeEEecCCCEEEEEEEeCCCCceeEEEeecc--c--cC
Confidence 001235677888741 147999999999999999985 2345555555 3 36
Q ss_pred eCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCC-CCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCC
Q 012467 153 ADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP-ATPPALTLLNYHPTSASKIPLSPPPITPRWDD 231 (463)
Q Consensus 153 ~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~-~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~ 231 (463)
.||.+ +.+.|.|||||++++++++ +|+||++........ ......+.|.|.+... . |..+.
T Consensus 229 ~DG~~------~~~~i~pG~~~~~~~~~~~--~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~~-------~---P~~d~ 290 (447)
T 2dv6_A 229 PGGAA------AFTQTDPGEETVVTFKALI--PGIYVYHCATPSVPTHITNGMYGLLLVEPEGG-------L---PQVDR 290 (447)
T ss_dssp GGGGG------GGCCBCTTCEEEEEEECCS--CEEEEEECCSSSHHHHHHTTCEEEEEEECTTC-------S---CCCSE
T ss_pred CCCCC------ccEEeCCCCEEEEEEECCC--CeEEEEEeCCCChHHHHhCCCEEEEEEeCCCC-------C---CCCCe
Confidence 79874 2346999999999999986 589999876421000 1123467777763210 1 11110
Q ss_pred CcccccccccccccCCCCCCCCccceEEEEEeeeeccCCeEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCC
Q 012467 232 YDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSN 311 (463)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~ 311 (463)
.....+..... .... .......+............|.|||..+....
T Consensus 291 -----~~~~~~~~~~~-~~~~-~~~g~~~~~~~~~~~~~~~~~~iNG~~~~~~~-------------------------- 337 (447)
T 2dv6_A 291 -----EFYVMQGEIYT-VKSF-GTSGEQEMDYEKLINEKPEYFLFNGSVGSLTR-------------------------- 337 (447)
T ss_dssp -----EEEEEEEEECB-SSCT-TCCEECCBBHHHHHTTCCSEEEETTSTTCCCC--------------------------
T ss_pred -----eEEEEeccccc-CCcc-cccccccCChHHhhccCCCEEEECCcccCCCC--------------------------
Confidence 00000000000 0000 00000000000000011235788887653110
Q ss_pred CcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCC-
Q 012467 312 EYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPP- 390 (463)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~- 390 (463)
..++.++.|++++|+|.|.+.. ..||||||||+|+||+.+ |.+. .+|.
T Consensus 338 ----------------~~~~~v~~g~~vrlrliN~~~~-----~~h~~hlhGh~f~vv~~d-G~~~---------~~p~~ 386 (447)
T 2dv6_A 338 ----------------SHPLYASVGETVRIFFGVGGPN-----FTSSFHVIGEIFDHVYSL-GSVV---------SPPLI 386 (447)
T ss_dssp ----------------CCCEEECTTCEEEEEEEEEESS-----CCEEEEEETCCEEEECGG-GCSS---------SCCEE
T ss_pred ----------------CcceEECCCCEEEEEEEeCCCC-----ceEeEEEcCcEEEEEEcC-Cccc---------CCCcc
Confidence 0138899999999999998642 189999999999999984 4331 2344
Q ss_pred ccceEEeCCCcEEEEEEEcCCceeeeecccchHhHHccceeeeecc
Q 012467 391 LKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALG 436 (463)
Q Consensus 391 ~rDTv~v~~~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~ 436 (463)
+|||+.|++|++++|+|+++|||.|+||||+++|++.||+++|.+.
T Consensus 387 ~~dtv~l~pg~r~~i~~~~~~pG~~~~hch~~~h~~~Gm~~~~~v~ 432 (447)
T 2dv6_A 387 GVQTVSVPPGGATIVDFKIDRAGRYILVDHALSRLEHGLVGFLNVD 432 (447)
T ss_dssp EESEEEECTTEEEEEEEECCSCEEEEEEESSGGGGGGTCCEEEEEC
T ss_pred cccEEEECCCcEEEEEEECCCCEEEEEEecCcCccccCCEEEEEEe
Confidence 6999999999999999999999999999999999999999998654
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-36 Score=337.02 Aligned_cols=325 Identities=17% Similarity=0.219 Sum_probs=200.5
Q ss_pred cccccccceeEEEeccchhhhhcceeeEEEEeCCCCCCCC-CCCCcceEEEE----eeeecccHHHHHhhhcCCCCCCCC
Q 012467 2 LDVWQVQAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEP-FHYDGEFNLLL----SDWWHRSVHEQEVGLSSRPLRWIG 76 (463)
Q Consensus 2 ~~~~~~~~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~~~p-~~~d~e~~l~l----~D~~~~~~~~~~~~~~~~~~~~~~ 76 (463)
|+|.+.++||||||||++.|+.+||+|+|||++......+ ++||.|++++| +||++....++...+......
T Consensus 685 ~~~~~~~~Gt~~~h~h~~~~~~~Gm~g~~~V~~~~~~~~~~~~yd~e~~~~iaa~~~dW~~~~~~~~~~~~~~~~~~--- 761 (1065)
T 2j5w_A 685 LHMWPDTEGTFNVECLTTDHYTGGMKQKYTVNQCRRQSEDSTFYLGERTYYIAAVEVEWDYSPQREWEKELHHLQEQ--- 761 (1065)
T ss_dssp EEECCCSCEEEEEEECSHHHHHTTCEEEEEEECCSCCCSCCCCCSEEEEEEEEEEEEEEESCSCCHHHHHHHHHHTC---
T ss_pred EEEecCCCeEEEEecCCCcccCCCcEEEEEEcCCccccCCccCCCcceEEEEeeeeccccCCcchhhhhhccCCCcc---
Confidence 6788889999999999999999999999999988543333 67899999999 899998876654333211111
Q ss_pred CCCeEEECCCCCCCCc-----cccccCCCCccc--cccC--CCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCce
Q 012467 77 EPQTLLINGRGQFNCS-----LAAHFSNGSAEQ--CKLR--GNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHK 147 (463)
Q Consensus 77 ~~d~~liNG~~~~~~~-----~~~~~~~~~~~~--c~~~--~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~ 147 (463)
.+.++++|+....-.. ....|++.+... .... ..-+...++|.+++|+++|+|++|... ..+.++. |.
T Consensus 762 ~p~~~~~n~~~~~iG~tY~k~~y~~~~d~tft~~~~r~~~~~~v~~pGP~I~v~~Gd~v~v~l~N~~~-~~~sih~--HG 838 (1065)
T 2j5w_A 762 NVSNAFLDKGEFYIGSKYKKVVYRQYTDSTFRVPVERKAEEEHLGILGPQLHADVGDKVKIIFKNMAT-RPYSIHA--HG 838 (1065)
T ss_dssp CCCCTTTCCTTTCCCSEEEEEEEEEESSTTCCSBCCCCGGGGGGTTSCCCEEEETTEEEEEEEEECSS-SCBCCEE--SS
T ss_pred CccceeecCCCccccceEeeeEEEEEcCCcceecccCCccccccCCCCCEEEEecCCEEEEEEEeCCC-CCceEee--cc
Confidence 1445555653221000 000111111000 0000 001233478999999999999999954 4444444 44
Q ss_pred eEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCC--------CCceEEEEEecCCCCCCCCeEEEEEeCCCCCCCCC
Q 012467 148 MVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDP--------SYNYWISAGVRGRKPATPPALTLLNYHPTSASKIP 219 (463)
Q Consensus 148 ~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~--------~g~y~ir~~~~~~~~~~~~~~a~l~y~~~~~~~~~ 219 (463)
+++...++ ..+.||++++..+.+.+.. .|.||................+.|.+...... .
T Consensus 839 l~~~~~~~----------~~i~PG~~~ty~~~~~~~~gp~~~~~~~gt~wYhsh~~~~~q~~~GL~G~liV~~~~~l--~ 906 (1065)
T 2j5w_A 839 VQTESSTV----------TPTLPGETLTYVWKIPERSGAGTEDSACIPWAYYSTVDQVKDLYSGLIGPLIVCRRPYL--K 906 (1065)
T ss_dssp CBCSCSCC----------CCBCTTCEEEEEEECCGGGSCCTTSCSEEEEEEECCTTHHHHHHTTCEEEEEEECCC-----
T ss_pred ccccCCCC----------ceeCCCCeEEEEEEecCccCCccccCCceEEEEecCCChHHhhhccccceeEecCcccc--c
Confidence 55443321 2567999987777765421 25788865422100001223344444321100 0
Q ss_pred CCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeee-ec---------------------------cCCe
Q 012467 220 LSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQ-NT---------------------------INGF 271 (463)
Q Consensus 220 ~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~-~~---------------------------~~~~ 271 (463)
+ ..++ .+.++.+.+.. .. ....
T Consensus 907 ----~------------------------~~~~--~d~D~~l~~~~~d~~~~~y~~~n~~~~~~~P~~v~~~~~~~~~~~ 956 (1065)
T 2j5w_A 907 ----V------------------------FNPR--RKLEFALLFLVFDENESWYLDDNIKTYSDHPEKVNKDDEEFIESN 956 (1065)
T ss_dssp ------------------------------CCC--CEEEEEEEEEEEEGGGSTTHHHHHHHHCSCGGGCCTTCHHHHHHT
T ss_pred ----c------------------------cCCC--cceEEEEEEEeecCCcceeeccCcccccCCccccCcchhhhhccC
Confidence 0 0000 11112111110 00 0000
Q ss_pred EEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCCC
Q 012467 272 TKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRP 351 (463)
Q Consensus 272 ~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~ 351 (463)
..|.|||..|.. ...+.++.|++|+|+|.|.+..
T Consensus 957 ~~~~iNG~~~~~--------------------------------------------~~~~~v~~G~~vr~~l~N~g~~-- 990 (1065)
T 2j5w_A 957 KMHAINGRMFGN--------------------------------------------LQGLTMHVGDEVNWYLMGMGNE-- 990 (1065)
T ss_dssp EEEEETTBCTTC--------------------------------------------CCCCEEETTCEEEEEEEECCST--
T ss_pred ceEEECCccCCC--------------------------------------------CccEEeCCCCEEEEEEEeCCCC--
Confidence 124444443310 1137889999999999997521
Q ss_pred CCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcCCceeeeecccchHhHHcccee
Q 012467 352 NLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGV 431 (463)
Q Consensus 352 ~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~ 431 (463)
.+.||||||||.|+|++++ |.+||||.|++|++++|+|+++|||.|+||||+++|++.|||+
T Consensus 991 --~~~HpfHlHG~~F~vv~~~----------------p~~~DTv~v~pg~~~~v~~~ad~pG~w~~HCH~~~H~~~GM~~ 1052 (1065)
T 2j5w_A 991 --IDLHTVHFHGHSFQYKHRG----------------VYSSDVFDIFPGTYQTLEMFPRTPGIWLLHCHVTDHIHAGMET 1052 (1065)
T ss_dssp --TCCEEEEESSCCEEETTTT----------------CEEESEEEECTTCEEEEEECCCSCEEEEEEECCHHHHHTTCEE
T ss_pred --CcceeEEEcccEEEEEecC----------------CceeeEEEECCCCeEEEEEECCCCeeEEEEeCCHHHHhcCCcE
Confidence 1289999999999999763 4799999999999999999999999999999999999999999
Q ss_pred eeecccc
Q 012467 432 VLALGVE 438 (463)
Q Consensus 432 ~~~~~~~ 438 (463)
+|.+...
T Consensus 1053 ~~~V~~~ 1059 (1065)
T 2j5w_A 1053 TYTVLQN 1059 (1065)
T ss_dssp EEEEECC
T ss_pred EEEEecC
Confidence 9987654
|
| >2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-36 Score=325.10 Aligned_cols=150 Identities=15% Similarity=0.118 Sum_probs=106.6
Q ss_pred cceeEEEeccchh--hhhcceeeEEEEeCCCCCCCCCCC-CcceEEEEee------eecccHHHHHhhhcCCCCCCCCCC
Q 012467 8 QAGTYFYHGHLGM--QRSAGLYGSLIVDVADGEKEPFHY-DGEFNLLLSD------WWHRSVHEQEVGLSSRPLRWIGEP 78 (463)
Q Consensus 8 ~~GT~WYHsH~~~--q~~~Gl~G~lIV~~~~~~~~p~~~-d~e~~l~l~D------~~~~~~~~~~~~~~~~~~~~~~~~ 78 (463)
|+||||||||... |+.+||+|+|||+++.+....... .+|++|++++ |+++........+.... +....
T Consensus 153 ~~GT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~e~~l~~~~~de~~~w~~~~~~~~~~~~~~~~--~~~~~ 230 (742)
T 2r7e_A 153 LCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKTQTLHKFILLFAVFDEGKSWHSETKNSLMQDRDAAS--ARAWP 230 (742)
T ss_dssp SSCCEEECCCSCSHHHHHHHCCEEEEECSSSCTTTTTTTCCCEECCCEECCCCSSSSCCCCCC-------CCS--CCCCC
T ss_pred CcEEEEEccCCChHHHhhCCcEEEEEEecCcccCcccCceeeEEEEEeecccCCccccccccccccccCCCcc--ccccC
Confidence 5799999999655 899999999999998652111111 3888888864 54443221111111111 12345
Q ss_pred CeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcce-EEEEEEeCceeEEEEeCCcc
Q 012467 79 QTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALA-SLNLAVKNHKMVVVEADGNY 157 (463)
Q Consensus 79 d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~-~~~~~i~~h~~~via~DG~~ 157 (463)
+..+|||+... . .+.++|++|++|||||||+++.. .+.|+|+||.|+|++.
T Consensus 231 ~~~~ING~~~~--~----------------------~~~l~v~~Ge~vrlrliN~g~~~~~h~~hlhGh~f~Vvg~---- 282 (742)
T 2r7e_A 231 KMHTVNGYVNR--S----------------------LPGLIGCHRKSVYWHVIGMGTTPEVHSIFLEGHTFLVRNH---- 282 (742)
T ss_dssp CCCEETTBCTB--C----------------------CCCCEECSSSCEEEECCCCCSSSCCCCCCCTTCCCEETTE----
T ss_pred ceEEECCccCC--C----------------------CcceEEcCCCEEEEEEEeCCCCCcceEEEECCCEEEEEeE----
Confidence 67899998642 1 13589999999999999999875 7899999999999842
Q ss_pred cceeeEeeEEecCCceEEEEEecCCCCCCceEEEEE
Q 012467 158 VQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAG 193 (463)
Q Consensus 158 v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~ 193 (463)
.+|++.|.|||+++|++++++ +|.|.+...
T Consensus 283 ----~~Dtv~v~Pg~~~~v~~~~~~--pG~w~~hCH 312 (742)
T 2r7e_A 283 ----RQASLEISPITFLTAQTLLMD--LGQFLLFCH 312 (742)
T ss_dssp ----ECCSCCCCTTCCCEEEECCCS--CSEECCCCC
T ss_pred ----ecceEEeCCCcEEEEEEEeCC--CeeEEEEeC
Confidence 367888999999999999986 577766544
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-33 Score=309.17 Aligned_cols=357 Identities=13% Similarity=0.122 Sum_probs=210.6
Q ss_pred ccccccc----------ceeEEEeccchh--hhhcceeeEEEEeCCCCCCC--CCCCCcceEEEEe------eeecccHH
Q 012467 2 LDVWQVQ----------AGTYFYHGHLGM--QRSAGLYGSLIVDVADGEKE--PFHYDGEFNLLLS------DWWHRSVH 61 (463)
Q Consensus 2 ~~~~~~~----------~GT~WYHsH~~~--q~~~Gl~G~lIV~~~~~~~~--p~~~d~e~~l~l~------D~~~~~~~ 61 (463)
|+|.+.+ +||||||||+.. |+++||+|+|||++++.... +..+|+|++|+|+ ||++....
T Consensus 157 Y~f~~~~~~gp~~~d~~aGT~wYHsH~~~~~qv~~GL~G~lIV~~~~~~~~p~~~~~d~e~~l~l~d~d~~~~w~~~~~~ 236 (1065)
T 2j5w_A 157 YMLLATEEQSPGEGDGNCVTRIYHSHIDAPKDIASGLIGPLIICKKDSLDKEKEKHIDREFVVMFSVVDENFSWYLEDNI 236 (1065)
T ss_dssp EEEECCSTTSCCTTSCSEEEEEEECCSSHHHHHHHTCEEEEEEECTTCBSSSSBTTCCEEEEEEEEEEEGGGSTTHHHHH
T ss_pred EEEEeccccCCccCCCCceEEEEEeccCchhHhhCccEEEEEEecCcccCCCccCCCccceEEEeeeecCCccccccchh
Confidence 6777776 599999999665 46899999999999875332 3456899999999 56655332
Q ss_pred HHHh-h--hcC-CCCCCCCCCCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcc-
Q 012467 62 EQEV-G--LSS-RPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTAL- 136 (463)
Q Consensus 62 ~~~~-~--~~~-~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~- 136 (463)
.... . ... ....+...++..+|||+... . .+.++|++|++|||||||+|..
T Consensus 237 ~~~~~~p~~~~~~~~~~~~~~~~~~iNG~~~~--~----------------------~~~l~v~~Ge~vRlRliNag~~~ 292 (1065)
T 2j5w_A 237 KTYCSEPEKVDKDNEDFQQSNRMYSVNGYTFG--S----------------------LSGLSMCAEDRVKWYLFGMGNEV 292 (1065)
T ss_dssp HHHCSCGGGCCTTCHHHHHHTEEEEETTEETT--C----------------------CCCCEEETTCEEEEEEEECSSTT
T ss_pred hhhhcCccccccccccccccCcEEEECCccCC--C----------------------CcceEECCCCEEEEEEEcCCccc
Confidence 2110 0 000 00000012457899998742 1 1368899999999999999986
Q ss_pred eEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCCCCCCeEEEEEeCCCCCC
Q 012467 137 ASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSAS 216 (463)
Q Consensus 137 ~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~~~~~~~a~l~y~~~~~~ 216 (463)
..+.|+|+||+|+ ++|..+++|.|+|||||||+|++++ +|+|+|+....... .....+.++|.+....
T Consensus 293 ~~~~~~i~Gh~f~--------v~p~~~dtv~I~pGer~dVlv~~~~--pG~y~i~~h~~~h~--~~Gm~~~~~V~~~~~~ 360 (1065)
T 2j5w_A 293 DVHAAFFHGQALT--------NKNYRIDTINLFPATLFDAYMVAQN--PGEWMLSCQNLNHL--KAGLQAFFQVQECNKS 360 (1065)
T ss_dssp CCEEEEETTCCEE--------ETTEEESEEEECBTCEEEEEEECCS--CEEEEEEECSHHHH--HTTCEEEEEEECSCCC
T ss_pred ceeEEEEcCCEEE--------ECCeeecEEEECCCcEEEEEEEeCC--CeeEEEEecCcchh--hCCCEEEEEEecCCCc
Confidence 6899999999999 4678999999999999999999987 58999988654221 2346788888743221
Q ss_pred CCCCCCCCCCCC-CCCCcccccccccccccCC-----CCCCCCccceEEEEEeeeeccCCeEEEEEecccCCCCCCCCcc
Q 012467 217 KIPLSPPPITPR-WDDYDHSKSFSNKIFALMG-----SPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLG 290 (463)
Q Consensus 217 ~~~~~~~p~~p~-~~~~~~~~~~~~~~~~~~~-----~~~~p~~~d~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~ 290 (463)
++.+.|..+. +.-.....+..-++.+... ....+......+.|.......++..+-.++ ..+..
T Consensus 361 --~~~~~~~g~~~~~~~i~A~e~~wdy~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~ig~~y~k~v~-~~y~d------- 430 (1065)
T 2j5w_A 361 --SSKDNIRGKHVRHYYIAAEEIIWNYAPSGIDIFTKENLTAPGSDSAVFFEQGTTRIGGSYKKLVY-REYTD------- 430 (1065)
T ss_dssp --CCCCCCTTSEEEEEEEEEEEEEEESCTTSBCTTTCCBTTCTTCTTHHHHCCBTTBCCSEEEEEEE-EEESS-------
T ss_pred --cccccccccceeEEEEeceecccccCCCCcccccccccCCCcccchhhhccCCcccCceEeeeee-ecccC-------
Confidence 1111111100 0000000000000110000 000111101111111111122333444444 33321
Q ss_pred ccccCCCCCCCCC--CCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEE
Q 012467 291 SIKYGLKDAFDQN--GPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWV 368 (463)
Q Consensus 291 ~~~~~~~~~~~~~--~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~v 368 (463)
+.|..+ ++|. +.. .-.-.+++.++.|++++++|+|.... .|+||+||+.|++
T Consensus 431 -------~~f~~~~~~~~~---~~~----------~g~lgpvi~a~~gd~i~i~f~N~~~~------~~s~h~hG~~f~~ 484 (1065)
T 2j5w_A 431 -------ASFTNRKERGPE---EEH----------LGILGPVIWAEVGDTIRVTFHNKGAY------PLSIEPIGVRFNK 484 (1065)
T ss_dssp -------TTCCSBCCCCGG---GGG----------GTTSCCCEEEETTEEEEEEEEECSSS------CBCCEEESSBCCG
T ss_pred -------CceEEcCcCCcc---ccc----------ccccCceEEEeCCCEEEEEEEECCCC------CccCcccceeeec
Confidence 111000 0000 000 00012469999999999999998876 8999999999999
Q ss_pred EeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcC---Cce-------eeeecccchHhHH--ccceeeee
Q 012467 369 LGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD---NPG-------AWAFHCHIEPHFH--IGMGVVLA 434 (463)
Q Consensus 369 l~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~ad---npG-------~w~~HCHi~~H~~--~GM~~~~~ 434 (463)
++.|. .+... . ....+...++...|.||+..+.+.... .|| .|+||+|+..=.| .|+.+.++
T Consensus 485 ~~~g~-~~~~~-~--~~~~~~~~~~~~~v~Pg~~~~y~w~v~~~~~p~~~dp~c~~~~y~s~vd~~~d~~sGLiGpll 558 (1065)
T 2j5w_A 485 NNEGT-YYSPN-Y--NPQSRSVPPSASHVAPTETFTYEWTVPKEVGPTNADPVCLAKMYYSAVDPTKDIFTGLIGPMK 558 (1065)
T ss_dssp GGCSB-CCBCC----------CCCCSSCBCTTCEEEEEEECCGGGSCCSSSCSEEEEEEECBSSHHHHHHHTCEEEEE
T ss_pred cCCCc-ccccc-c--ccccCCccCCCcccCCCCcEEEEEEccCCcCCCCCCCCeeEEEEeccCCcccccccccccceE
Confidence 88753 22100 0 000112245666778899777777643 355 8999999887655 78887775
|
| >1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-32 Score=270.25 Aligned_cols=181 Identities=20% Similarity=0.285 Sum_probs=145.7
Q ss_pred cccccccceeEEEeccc---hhhhhcceeeEEEEeCCCCCCCCCCCCcceEEEEeeeecccHHHHH----hhhcCCCCCC
Q 012467 2 LDVWQVQAGTYFYHGHL---GMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQE----VGLSSRPLRW 74 (463)
Q Consensus 2 ~~~~~~~~GT~WYHsH~---~~q~~~Gl~G~lIV~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~~~----~~~~~~~~~~ 74 (463)
|+|.+.|+||||||||. +.|+.+||+|+|||++++. .| .+|+|++|+++||+++...... ..+....
T Consensus 121 y~f~~~~~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~~--~p-~~d~e~~l~~~d~~~~~~~~~~g~~~~~~~~~~--- 194 (327)
T 1kbv_A 121 FSFKALQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEG--LP-KVDKEFYIVQGDFYTKGKKGAQGLQPFDMDKAV--- 194 (327)
T ss_dssp EEEECCSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTC--CC-CCSEEEEEEEEEECBSSCTTCCEEECBCHHHHH---
T ss_pred EEEECCCCeEEEEEeCCCChhhhhhcceEEEEEEecCCC--CC-CCceEEEEEeeeeeccCccccccccccChhHhc---
Confidence 67888999999999994 7899999999999998743 23 5899999999999987531100 0000000
Q ss_pred CCCCCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeC
Q 012467 75 IGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEAD 154 (463)
Q Consensus 75 ~~~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~D 154 (463)
...++.++|||+..+.|. | +.+++++|++|||||||+|....+.|+|+||+|+||+.|
T Consensus 195 ~~~~~~~~iNG~~~~~~~------------~----------~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~vi~~D 252 (327)
T 1kbv_A 195 AEQPEYVVFNGHVGALTG------------D----------NALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVE 252 (327)
T ss_dssp HTCCSEEEETTSTTTTSG------------G----------GCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEEGG
T ss_pred cCCCceEEEcCcccCCCC------------c----------eeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEEEEEcC
Confidence 135789999999886321 1 368999999999999999998999999999999999999
Q ss_pred CcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCCCCCCeEEEEEeCCC
Q 012467 155 GNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPT 213 (463)
Q Consensus 155 G~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~~~~~~~a~l~y~~~ 213 (463)
|++++|..++++.|+||||+||+|++++ +|+|+|+......+ .....+|+|+|++.
T Consensus 253 G~~~~p~~~d~l~l~pGer~dv~v~~~~--pG~y~l~~h~~~~~-~~~g~~a~l~~~g~ 308 (327)
T 1kbv_A 253 GGKLINENVQSTIVPAGGSAIVEFKVDI--PGNYTLVDHSIFRA-FNKGALGQLKVEGA 308 (327)
T ss_dssp GSSCEECSBSEEEECTTEEEEEEEEECS--CEEEEEEESSTHHH-HHSSCEEEEEEESC
T ss_pred CCcCCCCceeEEEECCCCEEEEEEEeCC--CeEEEEEecccccc-ccCCcEEEEEECCC
Confidence 9999999999999999999999999996 58999998654331 12346899999854
|
| >3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.9e-30 Score=248.72 Aligned_cols=180 Identities=21% Similarity=0.296 Sum_probs=140.3
Q ss_pred cccccccceeEEEeccchhhh---hcceeeEEEEeCCCCCCCCCCCCcceEEEEeeeecccHHHHHhhhcCCCCCCCCCC
Q 012467 2 LDVWQVQAGTYFYHGHLGMQR---SAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEP 78 (463)
Q Consensus 2 ~~~~~~~~GT~WYHsH~~~q~---~~Gl~G~lIV~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~ 78 (463)
|+|.+.++||||||||...|. .+||+|+|||++++..+.+..+|+|++|+|+||+++...+. ...+.. ...+
T Consensus 90 y~f~~~~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~~~~~~~~d~e~~l~l~dw~~~~~~~~----~~~~~~-~~~~ 164 (318)
T 3g5w_A 90 YKFKAEPAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNPLPIEKTVTKDYILMLSDWVSSWANKP----GEGGIP-GDVF 164 (318)
T ss_dssp EEEECCSCEEEEEECCSSHHHHHHHSCCEEEEEEECSSCCHHHHTCCEEEEEEEEEECGGGTTCT----TCCCCT-TCCC
T ss_pred EEEEcCCCEEEEEEccCChhhhhccCCCEEEEEEcCCCcccccccccceeEEEEEeecccccccc----ccCCCC-CCcC
Confidence 778889999999999976554 58999999999875422223579999999999998653211 111111 2357
Q ss_pred CeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCccc
Q 012467 79 QTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYV 158 (463)
Q Consensus 79 d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v 158 (463)
+..+|||+..++. ..++|++|++|||||+|++.. .+.|+|+||.|+||+.||.++
T Consensus 165 d~~~ING~~~~~~------------------------~~l~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~dG~~~ 219 (318)
T 3g5w_A 165 DYYTINAKSFPET------------------------QPIRVKKGDVIRLRLIGAGDH-VHAIHTHGHISQIAFKDGFPL 219 (318)
T ss_dssp CEEEETTBCBTSS------------------------CCEEECTTCEEEEEEEECSSS-CEEEEETTSCEEEEEETTEEE
T ss_pred cEEEEcCcCCCCC------------------------ccEEeCCCCEEEEEEEeCCCc-eEEEEECCcEEEEEecCCccc
Confidence 8999999986511 148999999999999999965 689999999999999999998
Q ss_pred -ceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCCC----CCCeEEEEEeCCC
Q 012467 159 -QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPA----TPPALTLLNYHPT 213 (463)
Q Consensus 159 -~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~~----~~~~~a~l~y~~~ 213 (463)
+|...|++.|+||||+||++++++ +|.|.+.-....-... .....++|+|++.
T Consensus 220 ~~p~~~dtv~l~pger~~v~~~a~~--pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~ 277 (318)
T 3g5w_A 220 DKPIKGDTVLIGPGERYDVILNMDN--PGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEV 277 (318)
T ss_dssp EEEEEESEEEECTTCEEEEEEECCS--CSEEEEEESSGGGSCBTTBSSCBSEEEEEETTT
T ss_pred CCCccccEEEECCCCEEEEEEECCC--CeeEEEEeccHHHhhccCcCCCCCEEEEEECCC
Confidence 799999999999999999999986 6898887654322211 1345789999864
|
| >2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-28 Score=241.65 Aligned_cols=180 Identities=18% Similarity=0.319 Sum_probs=139.2
Q ss_pred cccccccceeEEEeccchh--hhh-cceeeEEEEeCCCCCCCCCCCCcceEEEEeeeecccHHHHHhhhcCCCCCCCCCC
Q 012467 2 LDVWQVQAGTYFYHGHLGM--QRS-AGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEP 78 (463)
Q Consensus 2 ~~~~~~~~GT~WYHsH~~~--q~~-~Gl~G~lIV~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~ 78 (463)
|+|.+.++||||||||... |+. +||+|+|||++++....+..+|+|++|+|+||++...... . ..+.. ...+
T Consensus 91 y~f~~~~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~~~~~~~~d~e~~l~l~d~~~~~~~~~--~--~~g~~-~~~~ 165 (339)
T 2zwn_A 91 YKFKADRIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQPLPIEKRVTKDVIMMMSTWESAVADKY--G--EGGTP-MNVA 165 (339)
T ss_dssp EEEECCSCEEEEEECCSSHHHHTTTSCCEEEEEEECSSCCTTGGGCSEEEEEEEEEECGGGTTCT--T--CCCST-TSCC
T ss_pred EEEECCCCEEEEEEecCCchhhhhcCCceEeEEecCCCcccccccCCceEEEEeeheeccccccc--C--CCCCC-cccc
Confidence 6788889999999999655 888 9999999999876532233468999999999987432110 0 01111 1257
Q ss_pred CeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCccc
Q 012467 79 QTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYV 158 (463)
Q Consensus 79 d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v 158 (463)
+.++|||+..+. ...++|++|++|||||+|++. ..+.|+|+||+|+||+.||.++
T Consensus 166 ~~~~ING~~~~~------------------------~~~~~v~~G~~vrlrliN~~~-~~h~~hlhGh~f~vi~~DG~~~ 220 (339)
T 2zwn_A 166 DYFSVNAKSFPL------------------------TQPLRVKKGDVVKIRFFGAGG-GIHAMHSHGHDMLVTHKDGLPL 220 (339)
T ss_dssp CEEEETTBCTTS------------------------SCCEEECTTCEEEEEEEECSS-SCEEEEETTCCEEEEEETTEEE
T ss_pred ceEEEccccCCC------------------------cccEEECCCCEEEEEEEeCCC-ceEEEEECCcEEEEEEeCCeec
Confidence 899999987641 125899999999999999995 4899999999999999999999
Q ss_pred c-eeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCC----CCCCeEEEEEeCCC
Q 012467 159 Q-PFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP----ATPPALTLLNYHPT 213 (463)
Q Consensus 159 ~-P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~----~~~~~~a~l~y~~~ 213 (463)
+ |..+|++.|+||||+||+|++++ +|.|+++.....-+. ......++|+|++.
T Consensus 221 ~~p~~~dtv~l~pg~r~~v~~~~~~--pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~ 278 (339)
T 2zwn_A 221 DSPYYADTVLVSPGERYDVIIEADN--PGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGV 278 (339)
T ss_dssp EEEEEESEEEECTTCEEEEEEECCS--CSEEEEEECCGGGSCBTTBSSCSSEEEEEETTS
T ss_pred CCCcEEEEEEECCCCEEEEEEEeCC--CeeEEEEEechhhcccccccCCCcEEEEEECCC
Confidence 6 88999999999999999999986 588888776443211 22345799999864
|
| >2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.7e-29 Score=245.06 Aligned_cols=217 Identities=22% Similarity=0.315 Sum_probs=150.4
Q ss_pred eEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEe---CCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEE
Q 012467 116 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEA---DGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA 192 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~---DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~ 192 (463)
|+|++++|+++|+||+|.... ..+|+.|-+++++. ||++. ++...|+|||||++.+++++ .|+||.+.
T Consensus 35 P~I~v~~Gd~v~v~v~N~l~~---~~siH~HG~~~~~~~~~DGvp~----vtq~~I~PG~~~~y~f~~~~--~Gt~wyH~ 105 (339)
T 2zwn_A 35 PLIHVQEGDDVIVNVTNNTSL---PHTIHWHGVHQKGTWRSDGVPG----VTQQPIEAGDSYTYKFKADR--IGTLWYHC 105 (339)
T ss_dssp CEEEEETTCEEEEEEEEESSS---CBCCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEECCS--CEEEEEEC
T ss_pred CeEEEECCCEEEEEEEECCCC---CccEEeCCCCcCCCcccCCCCc----cccCccCCCCeEEEEEECCC--CEEEEEEe
Confidence 489999999999999999854 35777788888875 99874 34467999999999999975 79999987
Q ss_pred EecCCCCCC-CCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeeee-----
Q 012467 193 GVRGRKPAT-PPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQN----- 266 (463)
Q Consensus 193 ~~~~~~~~~-~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~----- 266 (463)
......... ....+.+.+++.... + .+ ...++++.+.+...
T Consensus 106 H~~~~~q~~~~Gl~G~liV~p~~~~-------~-~~-------------------------~~~d~e~~l~l~d~~~~~~ 152 (339)
T 2zwn_A 106 HVNVNEHVGVRGMWGPLIVDPKQPL-------P-IE-------------------------KRVTKDVIMMMSTWESAVA 152 (339)
T ss_dssp CSSHHHHTTTSCCEEEEEEECSSCC-------T-TG-------------------------GGCSEEEEEEEEEECGGGT
T ss_pred cCCchhhhhcCCceEeEEecCCCcc-------c-cc-------------------------ccCCceEEEEeeheecccc
Confidence 542210011 222333333321100 0 00 00112222211100
Q ss_pred --------ccCCeEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCE
Q 012467 267 --------TINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTT 338 (463)
Q Consensus 267 --------~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 338 (463)
.......|.|||..+.. ...+.++.|++
T Consensus 153 ~~~~~~g~~~~~~~~~~ING~~~~~--------------------------------------------~~~~~v~~G~~ 188 (339)
T 2zwn_A 153 DKYGEGGTPMNVADYFSVNAKSFPL--------------------------------------------TQPLRVKKGDV 188 (339)
T ss_dssp TCTTCCCSTTSCCCEEEETTBCTTS--------------------------------------------SCCEEECTTCE
T ss_pred cccCCCCCCccccceEEEccccCCC--------------------------------------------cccEEECCCCE
Confidence 00011246666654310 01278899999
Q ss_pred EEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcCCceeeeec
Q 012467 339 VDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFH 418 (463)
Q Consensus 339 v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adnpG~w~~H 418 (463)
++|+|.|.+.. .||||||||+|+|++.. |.. +.+|.++||+.|++|+++.|+|+++|||.|++|
T Consensus 189 vrlrliN~~~~------~h~~hlhGh~f~vi~~D-G~~---------~~~p~~~dtv~l~pg~r~~v~~~~~~pG~w~~h 252 (339)
T 2zwn_A 189 VKIRFFGAGGG------IHAMHSHGHDMLVTHKD-GLP---------LDSPYYADTVLVSPGERYDVIIEADNPGRFIFH 252 (339)
T ss_dssp EEEEEEECSSS------CEEEEETTCCEEEEEET-TEE---------EEEEEEESEEEECTTCEEEEEEECCSCSEEEEE
T ss_pred EEEEEEeCCCc------eEEEEECCcEEEEEEeC-Cee---------cCCCcEEEEEEECCCCEEEEEEEeCCCeeEEEE
Confidence 99999999866 89999999999999983 321 123678999999999999999999999999999
Q ss_pred ccchHh------HHccceeeee
Q 012467 419 CHIEPH------FHIGMGVVLA 434 (463)
Q Consensus 419 CHi~~H------~~~GM~~~~~ 434 (463)
||+++| +..||++++.
T Consensus 253 ch~~~H~~~~~~~~~gm~a~l~ 274 (339)
T 2zwn_A 253 DHVDTHVTAGGKHPGGPITVIE 274 (339)
T ss_dssp ECCGGGSCBTTBSSCSSEEEEE
T ss_pred EechhhcccccccCCCcEEEEE
Confidence 999999 7889988884
|
| >2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-29 Score=258.70 Aligned_cols=184 Identities=18% Similarity=0.256 Sum_probs=145.5
Q ss_pred cccccccceeEEEecc---chhhhhcceeeEEEEeCCCCCCCCCCCCcceEEEEeeeecccHHHHH-hh-hcCCCCCCCC
Q 012467 2 LDVWQVQAGTYFYHGH---LGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQE-VG-LSSRPLRWIG 76 (463)
Q Consensus 2 ~~~~~~~~GT~WYHsH---~~~q~~~Gl~G~lIV~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~~~-~~-~~~~~~~~~~ 76 (463)
|+|.+.++|||||||| +..|+.+||+|+|||++++. .| .||+|++|+|+||++....... .. +...... ..
T Consensus 111 y~f~~~~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~~--~~-~~d~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~-~~ 186 (442)
T 2zoo_A 111 FNFKALNPGLYIYHCATAPVGMHIANGMYGLILVEPKEG--LA-PVDREYYLVQGDFYTKGEFGEAGLQPFDMAKAI-DE 186 (442)
T ss_dssp EEEECCSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTC--CC-CCSEEEEEEEEEECBSSCTTCCEEECBCHHHHH-TT
T ss_pred EEEEcCCCeEEEEecCCCChHHHHhCccEEEEEEeCCCC--CC-CCCceEEEEeeeeeccCcccccccccCChhHhc-cC
Confidence 6788899999999996 68999999999999997753 23 6899999999999987642100 00 0000000 24
Q ss_pred CCCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCc
Q 012467 77 EPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGN 156 (463)
Q Consensus 77 ~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~ 156 (463)
.++.+||||+.... ...+.|.+++|++|||||+|+|....+.|+|+||+|+||+.||+
T Consensus 187 ~~~~~liNG~~~~~----------------------~~~~~l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi~~DG~ 244 (442)
T 2zoo_A 187 DADYVVFNGSVGST----------------------TDENSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYVEGG 244 (442)
T ss_dssp CCSEEEETTSTTTT----------------------SGGGCEEEETTCEEEEEEEEEESSCCEEEEEETCCBSEEEGGGS
T ss_pred CCCEEEECCCcCCC----------------------CCCCceEeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEEecCCc
Confidence 67999999997531 01136899999999999999999899999999999999999999
Q ss_pred ccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCCCCCCeEEEEEeCCCC
Q 012467 157 YVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTS 214 (463)
Q Consensus 157 ~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~~~~~~~a~l~y~~~~ 214 (463)
+++|..++++.|+||||+||+|++++ +|+|+++....... ......++|+|.+..
T Consensus 245 ~~~p~~~~~~~l~pg~r~~v~v~~~~--~G~y~~~~~~~~~~-~~~g~~a~l~v~~~~ 299 (442)
T 2zoo_A 245 SLKNHNVQTTLIPAGGAAIVEFKVEV--PGTFILVDHSIFRA-FNKGALAMLKVEGPD 299 (442)
T ss_dssp SCEECSBSEEEECTTEEEEEEEECCS--CEEEEEEESSTHHH-HTTSCEEEEEEESCC
T ss_pred cCCCccceEEEECCCeeEEEEEEcCC--CCeEEEEecccccc-cccCceEEEEecCCC
Confidence 99999999999999999999999996 58999988643321 134568999998644
|
| >3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-28 Score=242.57 Aligned_cols=223 Identities=18% Similarity=0.298 Sum_probs=151.9
Q ss_pred ceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCC-----------
Q 012467 115 PQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQD----------- 183 (463)
Q Consensus 115 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~----------- 183 (463)
.|+|++++|+++|+||+|.... .+.|+.+|..+. ++.||+++ +...|.|||+++..+++++.
T Consensus 76 GP~I~v~~Gd~v~v~~~N~l~~-~~sih~HG~~~~-~~~DG~~~-----t~~~I~PG~~~~y~f~~~~pg~~~~g~~~~~ 148 (343)
T 3cg8_A 76 GPLIEVNEGDTLHIEFTNTMDV-RASLHVHGLDYE-ISSDGTAM-----NKSDVEPGGTRTYTWRTHKPGRRDDGTWRPG 148 (343)
T ss_dssp CCCEEEETTCEEEEEEEECSSS-CBCCEESSSBCC-GGGSCCTT-----TTCSBCTTCEEEEEEECCCCEECTTSCEECC
T ss_pred CCEEEEECCCEEEEEEEECCCC-CeeEEecCcccC-CcCCCccc-----ccccccCCCEEEEEEEeCCCCcccccccCCC
Confidence 3689999999999999999954 445777777666 78999985 24568999999999998752
Q ss_pred CCCceEEEEEecCCC---CC---CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccce
Q 012467 184 PSYNYWISAGVRGRK---PA---TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHR 257 (463)
Q Consensus 184 ~~g~y~ir~~~~~~~---~~---~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~ 257 (463)
..|.||......... .+ ...+..+++..+. .. .|+
T Consensus 149 ~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~------------------------------------~~---pd~ 189 (343)
T 3cg8_A 149 SAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD------------------------------------VL---PDA 189 (343)
T ss_dssp SCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC------------------------------------CC---CSE
T ss_pred CceEEEEecCccccccchhhhhcCCeEEEEEecCCC------------------------------------CC---CCc
Confidence 124555543221110 00 1112222322100 00 145
Q ss_pred EEEEEeeeeccCCeEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCC
Q 012467 258 RLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNT 337 (463)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 337 (463)
++.+.+. .|.|||..+.. .+ .+.++.|+
T Consensus 190 e~~l~~~--------d~~iNG~~~~~--------------------~~------------------------~l~v~~Ge 217 (343)
T 3cg8_A 190 THTIVFN--------DMTINNRKPHT--------------------GP------------------------DFEATVGD 217 (343)
T ss_dssp EEEEEEE--------TTEETTCCTTC--------------------CC------------------------CEEEETTC
T ss_pred eEEEEcc--------cceecccCCCC--------------------Cc------------------------cEEeCCCC
Confidence 5554432 37899876410 00 28899999
Q ss_pred EEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc---CCcee
Q 012467 338 TVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA---DNPGA 414 (463)
Q Consensus 338 ~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a---dnpG~ 414 (463)
+|+|+|.|.+.+ .||||||||.|+|+. .|.+.. ....+.++||+.|+||+++.|+|++ +|||.
T Consensus 218 ~vri~l~N~g~~------~HpfHlHGh~f~v~~--~G~~~~------p~~~~~~~Dtv~v~PG~~~~v~~~~~~~~~pG~ 283 (343)
T 3cg8_A 218 RVEIVMITHGEY------YHTFHMHGHRWADNR--TGILTG------PDDPSRVIDNKITGPADSFGFQIIAGEGVGAGA 283 (343)
T ss_dssp EEEEEEEEESSC------CEEEEETTCCEESSS--SSSCCS------TTCCCCEESEEEECTTCEEEEEEETTTTTCSEE
T ss_pred EEEEEEEcCCcc------ccccEecCcEEEEec--cCcccC------CCCcccceeeEEeCCCCEEEEEEEECCCCCCee
Confidence 999999998876 999999999999974 343321 0123578999999999999999995 89999
Q ss_pred eeecccchHhHHccceeeeeccccccccCCCCCccc
Q 012467 415 WAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALAC 450 (463)
Q Consensus 415 w~~HCHi~~H~~~GM~~~~~~~~~~~~~~P~~~~~C 450 (463)
|+||||+++|++.||+++|.+...+ ..+|...+.|
T Consensus 284 w~~HCHi~~H~~~GM~g~~~V~~~~-~~~P~y~~~~ 318 (343)
T 3cg8_A 284 WMYHCHVQSHSDMGMVGLFLVKKPD-GTIPGYEPHE 318 (343)
T ss_dssp EEEEECSHHHHHTTCEEEEEEECTT-SCCSCC----
T ss_pred EEEeCCCHHHHhccCcEEEEEecCC-CCCCCCCCCC
Confidence 9999999999999999999876532 2344443433
|
| >3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.7e-28 Score=233.59 Aligned_cols=217 Identities=14% Similarity=0.175 Sum_probs=154.3
Q ss_pred eEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEec
Q 012467 116 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVR 195 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~ 195 (463)
|+|+++.|+++++|+.|... ....++++|.. ..+.||.+. ++...|.|||++++.+++++ +|+||......
T Consensus 66 P~i~~~~Gd~v~v~~~N~~~-~~~~iH~HG~~--~~~~DG~p~----~~~~~i~PG~~~~y~f~~~~--~Gt~~yH~H~~ 136 (288)
T 3gdc_A 66 PTLWAREGDALRIHFTNAGA-HPHTIHFHGVH--RATMDGTPG----IGAGSIAPGQSFTYEFDATP--FGTHLYHCHQS 136 (288)
T ss_dssp CEEEEETTCEEEEEEEECSS-SCBCCEESSCC--CGGGSCCTT----STTCSBCTTCEEEEEEECCS--CEEEEEECCCS
T ss_pred CcEEEeCCCEEEEEEEeCCC-CcccEEecccc--ccccCCCCC----ccceeECCCCEEEEEEEcCC--CccEEEEecCc
Confidence 58999999999999999874 45677888764 457899875 23467899999999999964 79999886543
Q ss_pred CCCC-CCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeeeecc-C--Ce
Q 012467 196 GRKP-ATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTI-N--GF 271 (463)
Q Consensus 196 ~~~~-~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~-~--~~ 271 (463)
.... ......+.|.+++... . + ..++++.+.+..... + ..
T Consensus 137 ~~~~~~~~Gl~G~liV~~~~~-------~---~--------------------------~~d~e~~l~~~d~~~~~g~~~ 180 (288)
T 3gdc_A 137 PLAPHIAKGLYGGFIVEPKEG-------R---P--------------------------PADDEMVMVMNGYNTDGGDDN 180 (288)
T ss_dssp SHHHHHHTTCEEEEEEECSSC-------C---C--------------------------CCSEEEEEEEEEECCSSTTCC
T ss_pred chHHHHhCcCeEEEEEeCCcc-------C---C--------------------------CCcceEEEEEeeEecCCCCCc
Confidence 2000 1123344444442100 0 0 123444444332111 1 12
Q ss_pred EEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCCC
Q 012467 272 TKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRP 351 (463)
Q Consensus 272 ~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~ 351 (463)
..|.|||..|... .+ .+.++.|++|+|.|.|.+..
T Consensus 181 ~~~~iNG~~~~~~-------------------~~------------------------~l~v~~Ge~vr~~l~N~g~~-- 215 (288)
T 3gdc_A 181 EFYSVNGLPFHFM-------------------DF------------------------PVKVKQHELVRIHLINVLEY-- 215 (288)
T ss_dssp SEEEETTSTTHHH-------------------HS------------------------CEEEETTCCEEEEEEECCCS--
T ss_pred ceEEECccccccc-------------------Cc------------------------ccccCCCCEEEEEEEeCCCC--
Confidence 3578888765210 00 17889999999999998753
Q ss_pred CCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcCCceeeeecccchHhHHcccee
Q 012467 352 NLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGV 431 (463)
Q Consensus 352 ~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~ 431 (463)
...||||||||.|+|++.|. . +..+.++||+.|+||+++.|+|++++||.|+||||+++|++.|||+
T Consensus 216 --~~~H~fHlhG~~f~v~~~g~--~---------~~~~~~~Dtv~v~pg~~~~v~~~~~~pG~~~~hCH~~~H~~~GM~~ 282 (288)
T 3gdc_A 216 --DPINSFHIHGNFFHYYPTGT--M---------LTPSEYTDTISQVQGQRGILELRFPYPGKFMFHAHKTEFAELGWMG 282 (288)
T ss_dssp --SSEEEEEETTCCEEEEETTC--C---------SSCSEEESEEEEETTCEEEEEECCCSCEEEEEECSSHHHHTTTCEE
T ss_pred --CcceeEEEcCCEEEEEcCCC--c---------cCCCceeeEEEeCCCceEEEEEECCCCEEEEEEecChHHHhcCCCE
Confidence 11599999999999997532 1 1345899999999999999999999999999999999999999999
Q ss_pred eeec
Q 012467 432 VLAL 435 (463)
Q Consensus 432 ~~~~ 435 (463)
.|.+
T Consensus 283 ~~~V 286 (288)
T 3gdc_A 283 FFEV 286 (288)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9975
|
| >1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... | Back alignment and structure |
|---|
Probab=99.95 E-value=8.1e-28 Score=237.50 Aligned_cols=183 Identities=19% Similarity=0.187 Sum_probs=134.9
Q ss_pred cccccccceeEEEeccc----hhhhhcceeeEEEEeCCCCC----CCCCCCCcceEEEEeeeecccHH--HHHhhhcCCC
Q 012467 2 LDVWQVQAGTYFYHGHL----GMQRSAGLYGSLIVDVADGE----KEPFHYDGEFNLLLSDWWHRSVH--EQEVGLSSRP 71 (463)
Q Consensus 2 ~~~~~~~~GT~WYHsH~----~~q~~~Gl~G~lIV~~~~~~----~~p~~~d~e~~l~l~D~~~~~~~--~~~~~~~~~~ 71 (463)
|+|.+.++||||||||. +.|+.+||+|+|||++++.. +.+..||+|++|+++||++.... ++ ..+...+
T Consensus 116 y~f~~~~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~~~~~~~~~~~~D~e~~l~~~D~~~~~~~~g~~-~~~~~~~ 194 (336)
T 1oe1_A 116 LRFKADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPLHYDRAYTIGEFDLYIPKGPDGKY-KDYATLA 194 (336)
T ss_dssp EEEECCSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECCCBCTTSSB-CCCSSTG
T ss_pred EEEECCCCeEEEEecCCCCchhHHHhCCCeEEEEEecCcCCcccccCcccCCceeEeeeeeeeeccccCCce-eeccccc
Confidence 77888999999999995 57999999999999987532 23567899999999999985221 11 0010000
Q ss_pred CC--------CCCCCCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEE-
Q 012467 72 LR--------WIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLA- 142 (463)
Q Consensus 72 ~~--------~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~- 142 (463)
.. ....++.++|||+....|. .+.++|++|++||| +|+++.+.+.|+
T Consensus 195 ~~~~~~~~~~~~~~~~~~liNG~~~~~~~----------------------~~~l~v~~GervRl--in~~~~~~~~~~~ 250 (336)
T 1oe1_A 195 ESYGDTVQVMRTLTPSHIVFNGKVGALTG----------------------ANALTAKVGETVLL--IHSQANRDTRPHL 250 (336)
T ss_dssp GGHHHHHHHHHTTCCSEEEETTSTTTTSG----------------------GGCEEEETTCEEEE--EEEESSSCBCEEE
T ss_pred ccccchhhHhhcCCCCEEEECCeeccCCC----------------------CcceEcCCCCEEEE--EecCCCCccceEE
Confidence 00 0236789999999875221 13689999997665 677666665544
Q ss_pred EeCceeEEEEeCCccccee--eEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCCCCCCeEEEEEeCCC
Q 012467 143 VKNHKMVVVEADGNYVQPF--EVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPT 213 (463)
Q Consensus 143 i~~h~~~via~DG~~v~P~--~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~~~~~~~a~l~y~~~ 213 (463)
|++|.|+||+ ||.+++|. .++++.|++||||||+|++++ +|+|+++....... ......|+++|++.
T Consensus 251 i~gh~~~Vi~-DG~~~~p~~~~~dtv~i~pGer~dvlv~~~~--pG~y~~~~h~~~~~-~~~G~~~~~~V~~~ 319 (336)
T 1oe1_A 251 IGGHGDWVWE-TGKFANPPQRDLETWFIRGGSAGAALYTFKQ--PGVYAYLNHNLIEA-FELGAAGHIKVEGK 319 (336)
T ss_dssp TTCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCS--CEEEEEEESSHHHH-HTTSCEEEEEEESC
T ss_pred ECCcCceEeC-CCcCcCCccccceEEEECCCCcEEEEEEcCC--CceEEEEechhhcc-ccCCCeEEEEECCC
Confidence 6999999997 99999875 368999999999999999997 59999987653211 12456799999854
|
| >3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} | Back alignment and structure |
|---|
Probab=99.95 E-value=1e-27 Score=234.06 Aligned_cols=219 Identities=18% Similarity=0.239 Sum_probs=149.6
Q ss_pred eEEEecCCCeEEEEEEecCcceEEEEEEeCceeE-EEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEe
Q 012467 116 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMV-VVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 194 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~-via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~ 194 (463)
|+|+++.|+++++|+.|... ....++.+|.... ..+.||.+. +....|.|||+++..+++++ +|+||.....
T Consensus 34 P~i~~~~Gd~v~v~~~N~l~-~~~siH~HG~~~~~~~~~DG~p~----~t~~~i~PG~~~~y~f~~~~--~Gt~wYH~H~ 106 (318)
T 3g5w_A 34 PLIHVMEGDDVTVNVTNMTT-LPHTIHWHGMLQRGTWQSDGVPH----ATQHAIEPGDTFTYKFKAEP--AGTMWYHCHV 106 (318)
T ss_dssp CEEEEETTCEEEEEEEECSS-SCBCCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEECCS--CEEEEEECCS
T ss_pred ceEEEeCCCEEEEEEEeCCC-CceeEEecCcCCCCCcccCCCcc----cccccCCCCCEEEEEEEcCC--CEEEEEEccC
Confidence 58999999999999999874 4567777776543 236899864 23457899999999999975 6999987654
Q ss_pred cCCCCC-CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeeeec------
Q 012467 195 RGRKPA-TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNT------ 267 (463)
Q Consensus 195 ~~~~~~-~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~------ 267 (463)
...... .....+.|.+++... .+ .+ ...++++.+.+....
T Consensus 107 ~~~~~~~~~Gl~G~lIV~~~~~-------~~-~~-------------------------~~~d~e~~l~l~dw~~~~~~~ 153 (318)
T 3g5w_A 107 NVNEHVTMRGMWGPLIVEPKNP-------LP-IE-------------------------KTVTKDYILMLSDWVSSWANK 153 (318)
T ss_dssp SHHHHHHHSCCEEEEEEECSSC-------CH-HH-------------------------HTCCEEEEEEEEEECGGGTTC
T ss_pred ChhhhhccCCCEEEEEEcCCCc-------cc-cc-------------------------ccccceeEEEEEeeccccccc
Confidence 211000 122334444442110 00 00 001222222111000
Q ss_pred -------cCCeEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEE
Q 012467 268 -------INGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVD 340 (463)
Q Consensus 268 -------~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ 340 (463)
......|.|||..+.. . ..+.++.|++|+
T Consensus 154 ~~~~~~~~~~~d~~~ING~~~~~--------------------~------------------------~~l~v~~G~~vr 189 (318)
T 3g5w_A 154 PGEGGIPGDVFDYYTINAKSFPE--------------------T------------------------QPIRVKKGDVIR 189 (318)
T ss_dssp TTCCCCTTCCCCEEEETTBCBTS--------------------S------------------------CCEEECTTCEEE
T ss_pred cccCCCCCCcCcEEEEcCcCCCC--------------------C------------------------ccEEeCCCCEEE
Confidence 0011247777765411 0 027889999999
Q ss_pred EEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcCCceeeeeccc
Q 012467 341 VILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCH 420 (463)
Q Consensus 341 ~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adnpG~w~~HCH 420 (463)
|+|.|.+.. .||||||||.|+|+++. |.. +.+|.++||+.|+||+++.|+|+++|||.|+||||
T Consensus 190 lrliN~~~~------~h~~hlhGh~f~vi~~d-G~~---------~~~p~~~dtv~l~pger~~v~~~a~~pG~w~~hCH 253 (318)
T 3g5w_A 190 LRLIGAGDH------VHAIHTHGHISQIAFKD-GFP---------LDKPIKGDTVLIGPGERYDVILNMDNPGLWMIHDH 253 (318)
T ss_dssp EEEEECSSS------CEEEEETTSCEEEEEET-TEE---------EEEEEEESEEEECTTCEEEEEEECCSCSEEEEEES
T ss_pred EEEEeCCCc------eEEEEECCcEEEEEecC-Ccc---------cCCCccccEEEECCCCEEEEEEECCCCeeEEEEec
Confidence 999999866 89999999999999984 321 12467899999999999999999999999999999
Q ss_pred chHhHH------ccceeeee
Q 012467 421 IEPHFH------IGMGVVLA 434 (463)
Q Consensus 421 i~~H~~------~GM~~~~~ 434 (463)
+++|++ .|||+++.
T Consensus 254 ~~~H~~~g~~~~~Gm~~~i~ 273 (318)
T 3g5w_A 254 VDTHTTNGDKPDGGIMTTIE 273 (318)
T ss_dssp SGGGSCBTTBSSCBSEEEEE
T ss_pred cHHHhhccCcCCCCCEEEEE
Confidence 999998 57888885
|
| >3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.7e-27 Score=228.19 Aligned_cols=216 Identities=19% Similarity=0.269 Sum_probs=148.7
Q ss_pred CCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCC---------
Q 012467 113 CAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQD--------- 183 (463)
Q Consensus 113 ~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~--------- 183 (463)
.+.|+|+++.|++++++|.|... ....|+..|..+. -+.||.++. .-.|.|||.+...++++..
T Consensus 55 ~PGP~i~~~~GD~v~v~~~N~l~-~~~siH~HG~~~~-~~~DG~~~~-----~~~i~PG~t~~Y~~~~~~~~~~~~~~~~ 127 (299)
T 3t9w_A 55 VPGPVLEMWEGDTLEIDLVNTTD-RVLSLHPHGVDYD-VNSDGTLMN-----GSAVMPGQTRRYTWRSHVGYRRADGSWA 127 (299)
T ss_dssp SSCCCEEEETTCEEEEEEEECSS-SCBCCEESSSBCC-GGGSCCTTT-----TCCBCTTCEEEEEEBCCCCEECTTSCEE
T ss_pred ccCceEEEECCeEEEEEEEECCC-CCccEEeCCcccC-CccCCCccc-----cCccCCCCeEEEEEEeecccccCCCcCC
Confidence 34579999999999999999864 4556777776543 357997642 1247899999998887631
Q ss_pred --CCCceEEEEEecCCCCC----CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccce
Q 012467 184 --PSYNYWISAGVRGRKPA----TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHR 257 (463)
Q Consensus 184 --~~g~y~ir~~~~~~~~~----~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~ 257 (463)
..|.||-.......... .....+.|..++.. . ...|+
T Consensus 128 ~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~----------------------------------~---~~~d~ 170 (299)
T 3t9w_A 128 EGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQG----------------------------------D---LLPKR 170 (299)
T ss_dssp CCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTT----------------------------------C---CCCSE
T ss_pred CCCceeEEEecCCcccccchhhhcccccceEEEeccc----------------------------------c---cCccc
Confidence 34777776533221100 01223333332100 0 01256
Q ss_pred EEEEEeeeeccCCeEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCC
Q 012467 258 RLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNT 337 (463)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 337 (463)
++.+.+. .|.+|+..+.. .+ .+.++.|+
T Consensus 171 e~~l~~~--------~~~~Ng~~~~~--------------------~p------------------------~l~v~~Ge 198 (299)
T 3t9w_A 171 QFTVVFN--------DMMINNRAHHD--------------------AP------------------------TFEANLGE 198 (299)
T ss_dssp EEEEEEE--------TTEETTCCTTC--------------------CC------------------------EEEEETTC
T ss_pred cceeeee--------eeeecCccccc--------------------cc------------------------cceecCCC
Confidence 6665542 36788765411 11 27889999
Q ss_pred EEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEE---EEEEcCCcee
Q 012467 338 TVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTA---LRFVADNPGA 414 (463)
Q Consensus 338 ~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~---irf~adnpG~ 414 (463)
+|+|+|.|.+.. .||||||||.|+|+..+..... ...+.++||+.|.||+... ++|+++|||.
T Consensus 199 ~Vr~~liN~~~~------~HpfHlHGh~F~v~~~g~~~~~--------~~~~~~~Dtv~v~PGe~~~~~via~~~dnPG~ 264 (299)
T 3t9w_A 199 RVEWIAIGHGSN------FHTFHLHGHRWLDNRTGMRTSE--------YDPSPLIDIKDLNPGVSFGFQVIAGEGVGPGM 264 (299)
T ss_dssp EEEEEEEEESSC------CCEEEETTCCEESSSSSSCCST--------TCCCCEESEEECCTTCEEEEEEETTTTTCSEE
T ss_pred EEEEEEEecccc------ceeeeEecceEEEEecccccCC--------cCCCCceeeEEeCCceeEEEEEEEeeCCCCee
Confidence 999999998876 8999999999999887543221 2335689999999997654 4556789999
Q ss_pred eeecccchHhHHccceeeeecccc
Q 012467 415 WAFHCHIEPHFHIGMGVVLALGVE 438 (463)
Q Consensus 415 w~~HCHi~~H~~~GM~~~~~~~~~ 438 (463)
|+||||+++|++.|||++|.+...
T Consensus 265 w~~HCHi~~H~~~GM~~~f~V~~~ 288 (299)
T 3t9w_A 265 WMYHCHVQNHSDMGMAGMFLVRNA 288 (299)
T ss_dssp EEEEECSHHHHHTTCEEEEEEECT
T ss_pred EEEEcCCHHHHhcCCeEEEEEECC
Confidence 999999999999999999987654
|
| >1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.7e-26 Score=227.68 Aligned_cols=182 Identities=18% Similarity=0.173 Sum_probs=134.4
Q ss_pred cccccccceeEEEeccch-----hhhhcceeeEEEEeCCCCC----CCCCCCCcceEEEEeeeeccc--HHHHHhhhcC-
Q 012467 2 LDVWQVQAGTYFYHGHLG-----MQRSAGLYGSLIVDVADGE----KEPFHYDGEFNLLLSDWWHRS--VHEQEVGLSS- 69 (463)
Q Consensus 2 ~~~~~~~~GT~WYHsH~~-----~q~~~Gl~G~lIV~~~~~~----~~p~~~d~e~~l~l~D~~~~~--~~~~~~~~~~- 69 (463)
|+|.+.++||||||||.. .|+.+||+|+|||++++.. ..|..||+|++|+++||++.. ..++. .+..
T Consensus 115 y~f~~~~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~g~~~-~~~~~ 193 (333)
T 1mzy_A 115 LRFKATRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPVRYDTVYYIGESDHYIPKDEDGTYM-RFSDP 193 (333)
T ss_dssp EEEECCSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECCCBCTTSCBC-CCSSH
T ss_pred EEEECCCCEEEEEeecCCcccchhhhhCCCEEEEEEccCcCccccccCCCccchheeeeeeeeccCcccccccc-ccccc
Confidence 678889999999999975 6999999999999987532 235678999999999999842 11110 0000
Q ss_pred --------CCCCCCCCCCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEE
Q 012467 70 --------RPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNL 141 (463)
Q Consensus 70 --------~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~ 141 (463)
.... ...++.++|||+... + ...+.++|++||+||||++|++....+.+
T Consensus 194 ~~~~~~~~~~~~-~~~~~~~~ING~~~~-------~---------------~~~~~l~v~~Ger~Rl~n~~~~~~~~~h~ 250 (333)
T 1mzy_A 194 SEGYEDMVAVMD-TLIPSHIVFNGAVGA-------L---------------TGEGALKAKVGDNVLFVHSQPNRDSRPHL 250 (333)
T ss_dssp HHHHHHHHHHHT-TTCCSEEEETTSTTT-------T---------------SGGGCEEEETTCEEEEEEEESSSCBCEEE
T ss_pred cccccchhHHhh-ccCCcEEEECCcccc-------c---------------CCCcceEecCCCEEEEEECCCCCccccEE
Confidence 0000 236789999999753 1 00136899999999888777665544544
Q ss_pred EEeCceeEEEEeCCcccce-e-eEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCCCCCCeEEEEEeCC
Q 012467 142 AVKNHKMVVVEADGNYVQP-F-EVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHP 212 (463)
Q Consensus 142 ~i~~h~~~via~DG~~v~P-~-~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~~~~~~~a~l~y~~ 212 (463)
+++|.++||+ ||.+++| . .++++.|+||||+||+|++++ +|+|++........ ......++++|.+
T Consensus 251 -i~~h~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~a~~--pG~y~~~ch~~~h~-~~~Gm~~~~~v~~ 318 (333)
T 1mzy_A 251 -IGGHGDLVWE-TGKFHNAPERDLETWFIRGGTAGAALYKFLQ--PGVYAYVNHNLIEA-VHKGATAHVLVEG 318 (333)
T ss_dssp -ETCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCS--CEEEEEEESSHHHH-HTTCCEEEEEEES
T ss_pred -ECCCCeEEEe-CCcccCCCccCcceEEECCCceEEEEEEcCC--CEEEEEecChhhhH-hhCCCEEEEEEcC
Confidence 8999999999 9999974 3 489999999999999999997 59999987654221 0235678999975
|
| >3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=6.7e-27 Score=224.18 Aligned_cols=215 Identities=17% Similarity=0.283 Sum_probs=153.5
Q ss_pred CceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCC----------
Q 012467 114 APQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQD---------- 183 (463)
Q Consensus 114 ~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~---------- 183 (463)
..|+|+++.|+++++++.|.. .....++..|..+.. +.||.++ ..-.|.||+++...+++++.
T Consensus 34 pGP~i~~~~Gd~v~v~~~N~~-~~~~siH~HG~~~~~-~~DG~~~-----t~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~ 106 (276)
T 3kw8_A 34 PGPLIEVNEGDTLHIEFTNTM-DVRASLHVHGLDYEI-SSDGTAM-----NKSDVEPGGTRTYTWRTHKPGRRDDGTWRP 106 (276)
T ss_dssp SCCCEEEETTCEEEEEEEECS-SSCBCCEESSSBCCG-GGSCCTT-----TTCSBCTTCEEEEEEECCCCEECTTSCEEC
T ss_pred cCCeEEEECCCEEEEEEEECC-CCCccEeecCcccCC-ccCCCcC-----CcCCCCCCCEEEEEEEcCCccccccCccCC
Confidence 446899999999999999986 556777787766543 5899872 33568999999999999752
Q ss_pred -CCCceEEEEEecCCC---CC-CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceE
Q 012467 184 -PSYNYWISAGVRGRK---PA-TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRR 258 (463)
Q Consensus 184 -~~g~y~ir~~~~~~~---~~-~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~ 258 (463)
..|.||-........ .+ .....+.|...... ... .|++
T Consensus 107 ~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~----------------------------------~~~---~drE 149 (276)
T 3kw8_A 107 GSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKG----------------------------------DVL---PDAT 149 (276)
T ss_dssp CSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTT----------------------------------CCC---CSEE
T ss_pred CCCEEEEEecCccccccchhhhhCccEEEEEEecCC----------------------------------Ccc---cccc
Confidence 246777765432211 00 11233333333100 000 1566
Q ss_pred EEEEeeeeccCCeEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCE
Q 012467 259 LTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTT 338 (463)
Q Consensus 259 ~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 338 (463)
+.+.+. .|.|||..+.. .+ .+.++.|++
T Consensus 150 ~~l~l~--------~~~iNG~~~~~--------------------~p------------------------~i~v~~G~~ 177 (276)
T 3kw8_A 150 HTIVFN--------DMTINNRKPHT--------------------GP------------------------DFEATVGDR 177 (276)
T ss_dssp EEEEEE--------TTEETTCCTTC--------------------CC------------------------CEEEETTCE
T ss_pred eEEEec--------ccccceecccC--------------------CC------------------------CEEEecCCE
Confidence 655442 37899987531 01 288999999
Q ss_pred EEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcC---Cceee
Q 012467 339 VDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD---NPGAW 415 (463)
Q Consensus 339 v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~ad---npG~w 415 (463)
|+|+|.|.+.+ .||||||||.|+|++. |.++.. ...+.++||+.|.||+++.++|+++ |||.|
T Consensus 178 vri~l~N~~~~------~Hp~HlHG~~f~v~~~--G~~~~p------~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG~w 243 (276)
T 3kw8_A 178 VEIVMITHGEY------YHTFHMHGHRWADNRT--GILTGP------DDPSRVIDNKITGPADSFGFQIIAGEGVGAGAW 243 (276)
T ss_dssp EEEEEEEESSC------CEEEEETTCCEESSSS--SSCCST------TCCCCEESEEEECTTCEEEEEEETTTTTCSEEE
T ss_pred EEEEEecCCCc------ceeEEEccceeEEecc--CccCCC------cccccCCccEEeCCCceEEEEEEeccCCCCCeE
Confidence 99999998876 9999999999999763 433210 1224689999999999999999997 89999
Q ss_pred eecccchHhHHccceeeeecccc
Q 012467 416 AFHCHIEPHFHIGMGVVLALGVE 438 (463)
Q Consensus 416 ~~HCHi~~H~~~GM~~~~~~~~~ 438 (463)
+||||+++|++.|||++|.+.+.
T Consensus 244 ~~HCH~~~H~~~GM~g~~~V~~~ 266 (276)
T 3kw8_A 244 MYHCHVQSHSDMGMVGLFLVKKP 266 (276)
T ss_dssp EEEECSHHHHHTTCEEEEEEECT
T ss_pred EEECCCchHhhCCCeEEEEEeCC
Confidence 99999999999999999976553
|
| >2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... | Back alignment and structure |
|---|
Probab=99.94 E-value=9.7e-27 Score=230.16 Aligned_cols=184 Identities=15% Similarity=0.139 Sum_probs=131.5
Q ss_pred cccccccceeEEEeccch----hhhhcceeeEEEEeCCCCC----CCCCCCCcceEEEEeeeecc--cHHHHHhhhcCCC
Q 012467 2 LDVWQVQAGTYFYHGHLG----MQRSAGLYGSLIVDVADGE----KEPFHYDGEFNLLLSDWWHR--SVHEQEVGLSSRP 71 (463)
Q Consensus 2 ~~~~~~~~GT~WYHsH~~----~q~~~Gl~G~lIV~~~~~~----~~p~~~d~e~~l~l~D~~~~--~~~~~~~~~~~~~ 71 (463)
|+|.+.++||||||||.. .|+.+||+|+|||+++++. ..|..||+|++|+++||++. ....+. .+...+
T Consensus 122 y~~~~~~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~g~~~-~~~~~~ 200 (340)
T 2bw4_A 122 LRFKATKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPLTYDKIYYVGEQDFYVPKDEAGNYK-KYETPG 200 (340)
T ss_dssp EEEECCSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCEECTTSCEECCSEEEEEEEEEECCCBCTTSCBC-CCCSHH
T ss_pred EEEECCCCeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCcccccCCCcCcceeEEEeeeeeeeccccCCccc-cccccc
Confidence 678888999999999954 7999999999999987531 23567899999999999984 211110 000000
Q ss_pred --------CCCCCCCCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEE
Q 012467 72 --------LRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAV 143 (463)
Q Consensus 72 --------~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i 143 (463)
......++.++|||+..... ..+.++|++|+++||+++|++....+. .+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~iNG~~~~~~----------------------~~~~l~v~~G~r~Rl~n~~~~~~~~~~-~i 257 (340)
T 2bw4_A 201 EAYEDAVKAMRTLTPTHIVFNGAVGALT----------------------GDHALTAAVGERVLVVHSQANRDTRPH-LI 257 (340)
T ss_dssp HHHHHHHHHHHTTCCSEEEETTSTTTTS----------------------GGGCEEEETTCEEEEEEEESSSCBCEE-EE
T ss_pred ccccchhhHhhcCCCCEEEECCccCCcc----------------------CCCceEcCCCCEEEEEECCCCCccceE-Ee
Confidence 00023678999999986310 124689999998877666655433333 38
Q ss_pred eCceeEEEEeCCcccce-e-eEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCCCCCCeEEEEEeCCC
Q 012467 144 KNHKMVVVEADGNYVQP-F-EVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPT 213 (463)
Q Consensus 144 ~~h~~~via~DG~~v~P-~-~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~~~~~~~a~l~y~~~ 213 (463)
++|.|+||+ ||.++.+ . .++++.|++|||+||+|++++ +|+|+++....... ......++++|++.
T Consensus 258 ~gh~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~~~~--pG~y~~~~h~~~~h-~~~Gm~~~~~V~~~ 325 (340)
T 2bw4_A 258 GGHGDYVWA-TGKFRNPPDLDQETWLIPGGTAGAAFYTFRQ--PGVYAYVNHNLIEA-FELGAAGHFKVTGE 325 (340)
T ss_dssp TCCEEEEET-TCCTTSCCEEEESCCCBCTTEEEEEEEECCS--CEEEEEEESSHHHH-HTTSCEEEEEEESC
T ss_pred cCcceEEeC-CCcccCCccccceEEEeCCCceEEEEEECCC--CeeeEEEcCchHHH-HhCCCEEEEEECCC
Confidence 999999997 9998864 3 589999999999999999997 59999988654211 12345788999853
|
| >3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=9.8e-26 Score=219.86 Aligned_cols=216 Identities=17% Similarity=0.254 Sum_probs=148.3
Q ss_pred CCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCC---------
Q 012467 112 QCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQ--------- 182 (463)
Q Consensus 112 ~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~--------- 182 (463)
+.+.|+|+++.|++++++|.|... ....|+..|..+. -+.||.++. .-.|.|||.+...+++..
T Consensus 38 t~PGP~i~~~~Gd~v~v~~~N~l~-~~~siH~HG~~~~-~~~dG~~~~-----~~~i~PG~~~~Y~~~~~~P~~~~~~~~ 110 (313)
T 3tas_A 38 TIPGPLIELNEGDTLHIEFENTMD-VPVSLHVHGLDYE-ISSDGTKQS-----RSDVEPGGTRTYTWRTHVPGRRADGTW 110 (313)
T ss_dssp BSSCCCEEEETTCEEEEEEEECSS-SCBCCEESSSBCC-GGGSCSTTT-----TCCBCTTCEEEEEEBCCCCEECTTSCE
T ss_pred cccCCeEEEECCCEEEEEEEECCC-CCccEeecCCcCC-ccCCCCccc-----cCCcCCCCEEEEEEEeccCCccccccc
Confidence 345578999999999999999864 4456677775543 257887642 124789999988887653
Q ss_pred --CCCCceEEEEEecCCCCC----CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccc
Q 012467 183 --DPSYNYWISAGVRGRKPA----TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFH 256 (463)
Q Consensus 183 --~~~g~y~ir~~~~~~~~~----~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d 256 (463)
...|.||-.......... .....+.|.+.+. .....|
T Consensus 111 ~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~-------------------------------------~~~~~d 153 (313)
T 3tas_A 111 RAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRK-------------------------------------GDVLPD 153 (313)
T ss_dssp ECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECT-------------------------------------TCBCCS
T ss_pred cCCCceEEEEeecCcccccchhhhhccccCceEeecc-------------------------------------cccccc
Confidence 124667765432211100 0122333333310 001135
Q ss_pred eEEEEEeeeeccCCeEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCC
Q 012467 257 RRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLN 336 (463)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 336 (463)
+++.+.+. .|++|+..+.. .+ .+.++.|
T Consensus 154 ~e~~l~~~--------d~t~Ng~~~~~--------------------~~------------------------~l~v~~G 181 (313)
T 3tas_A 154 RTHTIVFN--------DMTINNRPAHT--------------------GP------------------------DFEATVG 181 (313)
T ss_dssp EEEEEEEE--------TTEETTCCTTC--------------------CC------------------------CEEEETT
T ss_pred ccceeecc--------chhcccCCccc--------------------cc------------------------ccccccC
Confidence 66665543 37788765421 11 1788999
Q ss_pred CEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEE---cCCce
Q 012467 337 TTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFV---ADNPG 413 (463)
Q Consensus 337 ~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~---adnpG 413 (463)
++|+|+|.|.+.+ .||||||||.|+|+.++.... ....+.++||+.|.|++.+.++|. ++|||
T Consensus 182 e~vr~~liN~g~~------~hpfHlHGh~F~v~~~~~~~~--------~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG 247 (313)
T 3tas_A 182 DRVEFVMITHGEY------YHTFHLHGHRWADNRTGMLTG--------PDDPSQVIDNKICGPADSFGFQVIAGEGVGAG 247 (313)
T ss_dssp CEEEEEEEEESSC------CEEEEETTCCEESSTTSSCCS--------TTCCCCEESEEEECTTCEEEEEEETTTTTCSE
T ss_pred CEEEEEEeccccc------ceeeeecCCeeEEEEECCccC--------CCCCCeeeeEEEeCCCcceEEEEEeccCCCCE
Confidence 9999999999876 899999999999988753221 123468999999999998877775 56899
Q ss_pred eeeecccchHhHHccceeeeeccc
Q 012467 414 AWAFHCHIEPHFHIGMGVVLALGV 437 (463)
Q Consensus 414 ~w~~HCHi~~H~~~GM~~~~~~~~ 437 (463)
.|+||||+++|++.|||++|.+..
T Consensus 248 ~w~~HCHi~~H~~~GM~~~f~V~~ 271 (313)
T 3tas_A 248 AWMYHCHVQSHSDMGMVGLFLVKK 271 (313)
T ss_dssp EEEEEECSHHHHHTTCEEEEEEEC
T ss_pred eEEEEeCChHHHHCCCeEEEEEEC
Confidence 999999999999999999997554
|
| >3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.92 E-value=8.1e-25 Score=210.96 Aligned_cols=147 Identities=16% Similarity=0.226 Sum_probs=122.3
Q ss_pred cccccccceeEEEeccch---hhhhcceeeEEEEeCCCCCCCCCCCCcceEEEEeeeecccHHHHHhhhcCCCCCCCCCC
Q 012467 2 LDVWQVQAGTYFYHGHLG---MQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEP 78 (463)
Q Consensus 2 ~~~~~~~~GT~WYHsH~~---~q~~~Gl~G~lIV~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~ 78 (463)
|+|.+.++||||||||.. .|+.+||+|+|||+++++ ...+|+|++|+++||+.++. ..+
T Consensus 119 y~f~~~~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~---~~~~d~e~~l~~~d~~~~~g---------------~~~ 180 (288)
T 3gdc_A 119 YEFDATPFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEG---RPPADDEMVMVMNGYNTDGG---------------DDN 180 (288)
T ss_dssp EEEECCSCEEEEEECCCSSHHHHHHTTCEEEEEEECSSC---CCCCSEEEEEEEEEECCSST---------------TCC
T ss_pred EEEEcCCCccEEEEecCcchHHHHhCcCeEEEEEeCCcc---CCCCcceEEEEEeeEecCCC---------------CCc
Confidence 788899999999999965 799999999999998865 23568999999999987621 146
Q ss_pred CeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcce-EEEEEEeCceeEEEEeCCcc
Q 012467 79 QTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALA-SLNLAVKNHKMVVVEADGNY 157 (463)
Q Consensus 79 d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~-~~~~~i~~h~~~via~DG~~ 157 (463)
+..+|||+... + ....++++.|+++||||+|++... .+.|+|+||.|+|++ +|..
T Consensus 181 ~~~~iNG~~~~-------~----------------~~~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~-~g~~ 236 (288)
T 3gdc_A 181 EFYSVNGLPFH-------F----------------MDFPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYP-TGTM 236 (288)
T ss_dssp SEEEETTSTTH-------H----------------HHSCEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEE-TTCC
T ss_pred ceEEECccccc-------c----------------cCcccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEc-CCCc
Confidence 78999999763 0 012478999999999999999654 799999999999998 5554
Q ss_pred c-ceeeEeeEEecCCceEEEEEecCCCCCCceEEEE
Q 012467 158 V-QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA 192 (463)
Q Consensus 158 v-~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~ 192 (463)
+ .|...|++.|+||||++|++++++ +|.|.+.-
T Consensus 237 ~~~~~~~Dtv~v~pg~~~~v~~~~~~--pG~~~~hC 270 (288)
T 3gdc_A 237 LTPSEYTDTISQVQGQRGILELRFPY--PGKFMFHA 270 (288)
T ss_dssp SSCSEEESEEEEETTCEEEEEECCCS--CEEEEEEC
T ss_pred cCCCceeeEEEeCCCceEEEEEECCC--CEEEEEEe
Confidence 4 568899999999999999999986 68988754
|
| >2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.9e-24 Score=220.31 Aligned_cols=183 Identities=18% Similarity=0.204 Sum_probs=139.7
Q ss_pred cccccccceeEEEeccc---hhhhhcceeeEEEEeCCCCCCCCCCCCcceEEEEeeeecccHHHHHhhh-cCCCCCCCCC
Q 012467 2 LDVWQVQAGTYFYHGHL---GMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGL-SSRPLRWIGE 77 (463)
Q Consensus 2 ~~~~~~~~GT~WYHsH~---~~q~~~Gl~G~lIV~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~~~~~~-~~~~~~~~~~ 77 (463)
|.|.+.++||||||||. ..|+.+||+|+|||++++. .| .+|+|++++++||++.......... ..........
T Consensus 246 ~~~~~~~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~~--~P-~~d~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 322 (447)
T 2dv6_A 246 VTFKALIPGIYVYHCATPSVPTHITNGMYGLLLVEPEGG--LP-QVDREFYVMQGEIYTVKSFGTSGEQEMDYEKLINEK 322 (447)
T ss_dssp EEEECCSCEEEEEECCSSSHHHHHHTTCEEEEEEECTTC--SC-CCSEEEEEEEEEECBSSCTTCCEECCBBHHHHHTTC
T ss_pred EEEECCCCeEEEEEeCCCChHHHHhCCCEEEEEEeCCCC--CC-CCCeeEEEEecccccCCcccccccccCChHHhhccC
Confidence 56777899999999995 4799999999999998743 23 5789999999999976421100000 0000000125
Q ss_pred CCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcc
Q 012467 78 PQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNY 157 (463)
Q Consensus 78 ~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~ 157 (463)
++.++|||+....+. ...+.|++|++|||||+|++....+.|+|+||.|+||+.||++
T Consensus 323 ~~~~~iNG~~~~~~~----------------------~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~~dG~~ 380 (447)
T 2dv6_A 323 PEYFLFNGSVGSLTR----------------------SHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVYSLGSV 380 (447)
T ss_dssp CSEEEETTSTTCCCC----------------------CCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEECGGGCS
T ss_pred CCEEEECCcccCCCC----------------------CcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEEcCCcc
Confidence 688999999875221 1268999999999999999988899999999999999999999
Q ss_pred ccee--eEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCCCCCCeEEEEEeCCC
Q 012467 158 VQPF--EVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPT 213 (463)
Q Consensus 158 v~P~--~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~~~~~~~a~l~y~~~ 213 (463)
+.|. ..|++.|+||||++|+|++++ +|.|+|+...... ......++++|++.
T Consensus 381 ~~~p~~~~dtv~l~pg~r~~i~~~~~~--pG~~~~hch~~~h--~~~Gm~~~~~v~~~ 434 (447)
T 2dv6_A 381 VSPPLIGVQTVSVPPGGATIVDFKIDR--AGRYILVDHALSR--LEHGLVGFLNVDGP 434 (447)
T ss_dssp SSCCEEEESEEEECTTEEEEEEEECCS--CEEEEEEESSGGG--GGGTCCEEEEECSC
T ss_pred cCCCcccccEEEECCCcEEEEEEECCC--CEEEEEEecCcCc--cccCCEEEEEEeCC
Confidence 9765 489999999999999999986 6899998865432 12345799999853
|
| >1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=4.2e-23 Score=220.78 Aligned_cols=159 Identities=13% Similarity=0.125 Sum_probs=118.7
Q ss_pred ccccccc------ce----eEEEeccc--hhhhhcceeeEEEEeCCCCCCC--CCCC-CcceEEEEe------eeecccH
Q 012467 2 LDVWQVQ------AG----TYFYHGHL--GMQRSAGLYGSLIVDVADGEKE--PFHY-DGEFNLLLS------DWWHRSV 60 (463)
Q Consensus 2 ~~~~~~~------~G----T~WYHsH~--~~q~~~Gl~G~lIV~~~~~~~~--p~~~-d~e~~l~l~------D~~~~~~ 60 (463)
|+|.+.+ +| |||||||. ..|+.+||+|+|||+++.+... ...+ ++|++|+|+ ||+++..
T Consensus 131 Y~f~~~~~~gp~~~G~~c~T~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~~~e~~l~l~~~d~~~~w~~~~~ 210 (647)
T 1sdd_B 131 YVWHATTRSGPENPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKGTLDKETNMPVDMREFVLLFMVFDEKKSWYYDKK 210 (647)
T ss_dssp CCEECCTTTSCCSSSCSEEEEEEECCSSHHHHHTTTCEEEEEEECTTSSCTTSCCCSSCCEEEEEEEEEEGGGSSCCC--
T ss_pred EEEECCcccCCCCCCCCceEEEEccCCCCcccccccCccCEEEeeCCCcccccCCCCcceeEEEEEEeecCccccccccC
Confidence 6677765 58 99999996 6799999999999999864211 1123 689999999 7777654
Q ss_pred HHHHhhhcCCCCCCCCCCCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcce-EE
Q 012467 61 HEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALA-SL 139 (463)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~-~~ 139 (463)
.......... .+...++.++|||+... .+.|.|++|++|||||||++... .+
T Consensus 211 ~~~~~~~~~~--~~~~~~~~~~iNG~~~~-------------------------~p~l~v~~G~~vrlrliN~~~~~~~h 263 (647)
T 1sdd_B 211 PTRSWRRASS--EVKNSHEFHAINGMIYN-------------------------LPGLRMYEQEWVRLHLLNLGGSRDIH 263 (647)
T ss_dssp ---------------CCCEEEEETTBSSC-------------------------CCCCEEETTCEEEEEEEECCCTTCCE
T ss_pred cccccccCCc--chhhcCceeccCCEecC-------------------------CCCeEEcCCCEEEEEEEeCCCCCcce
Confidence 3211111111 11335788999999752 13689999999999999999874 89
Q ss_pred EEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEe
Q 012467 140 NLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 194 (463)
Q Consensus 140 ~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~ 194 (463)
.|+|+||.|+||+.||. .++++.|+||||+||+|++++ +|.|.+....
T Consensus 264 ~~hlhG~~f~vi~~d~~-----~~d~v~l~pg~r~~v~~~~~~--pG~w~~hch~ 311 (647)
T 1sdd_B 264 VVHFHGQTLLENGTQQH-----QLGVWPLLPGSFKTLEMKASK--PGWWLLDTEV 311 (647)
T ss_dssp EEEETTCCEEECSSSCE-----EESSEEECTTEEEEEEEECCS--SEEEEEECCC
T ss_pred eEEEcCcEEEEecCCCc-----ccceEEECCCeEEEEEEEecc--ceEeecccCc
Confidence 99999999999999864 689999999999999999987 5888776553
|
| >1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 | Back alignment and structure |
|---|
Probab=99.89 E-value=8.1e-25 Score=212.79 Aligned_cols=228 Identities=11% Similarity=0.116 Sum_probs=129.1
Q ss_pred ceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccc----eeeEeeEEecCCceEEEEEecCCCC------
Q 012467 115 PQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQ----PFEVDDMDIYSGESYSVLLTTNQDP------ 184 (463)
Q Consensus 115 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~----P~~~~~l~i~~GeR~dvlV~~~~~~------ 184 (463)
.|+|++++|+++|+||+|.. ...+.|+.+|..+. .+.||.+.. +...+...|.||||++..+++++..
T Consensus 59 GP~I~v~~Gd~v~v~~~N~l-~~~~siH~HGl~~~-~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~~~~gp~~~d 136 (306)
T 1sdd_A 59 GPTLYAEVGDIMKVHFKNKA-HKPLSIHAQGIKYS-KFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISEHSGPTHDD 136 (306)
T ss_dssp CCCEEEETTCEEEEEEEECS-SSCBCCEEESSCCC-TTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCGGGSCCSSS
T ss_pred CCEEEEeCCCEEEEEEEECC-CCcccEeecceecc-cccCCCccCCCCcccccCCCccCCCCeEEEEEEeCCccCCCCCC
Confidence 35899999999999999976 45556666665532 268998752 2233357899999999999998732
Q ss_pred --CCceEEEEEecCCCC-CCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEE
Q 012467 185 --SYNYWISAGVRGRKP-ATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTL 261 (463)
Q Consensus 185 --~g~y~ir~~~~~~~~-~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~ 261 (463)
.|+||.+........ ...-.-++|.....+... .+..+.. +. ++...+.. +
T Consensus 137 ~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~~~-----~~~~~~~-d~----e~~l~~~d----------------~ 190 (306)
T 1sdd_A 137 PPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTE-----DGTQKMF-EK----QHVLMFAV----------------F 190 (306)
T ss_dssp CSEEEEEEECCSSSHHHHHTTCCEEEEEECTTCBCT-----TSSBSSS-CC----CCCCBCCE----------------E
T ss_pred CCceEEEEeccCCchhhhccCceEEEEEccCCCCCc-----cCCcCcc-cc----eEEEEEEe----------------c
Confidence 269999876322100 111122444443221110 0000000 00 00000000 0
Q ss_pred Eeeee-ccCCeEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEE
Q 012467 262 LNTQN-TINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVD 340 (463)
Q Consensus 262 ~~~~~-~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ 340 (463)
..... .......|.|||..+.. .| .+.++.|++++
T Consensus 191 d~~~~~~~~~~~~~~ING~~~~~---------------------~p-----------------------~l~v~~G~~vr 226 (306)
T 1sdd_A 191 DESKSWNQTSSLMYTVNGYVNGT---------------------MP-----------------------DITVCAHDHIS 226 (306)
T ss_dssp ETTSSSSCCCCEEECSSSCCSSC---------------------CC-----------------------CCCCCCC----
T ss_pred ccccccccCCCcceeeCCEecCC---------------------Cc-----------------------ceEEcCCCEEE
Confidence 00000 00011346677765410 00 15678999999
Q ss_pred EEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcCCceeeeeccc
Q 012467 341 VILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCH 420 (463)
Q Consensus 341 ~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adnpG~w~~HCH 420 (463)
|+|.|.+.. ...|+||||||.|.+ +| .++||+.|.||+.+.|+|++++||.|+||||
T Consensus 227 lrliN~g~~----~~~h~~hlhG~~~~~----dG---------------~~~dtv~l~pger~~v~~~~~~pG~~~~hch 283 (306)
T 1sdd_A 227 WHLIGMSSG----PELFSIHFNGQVLEQ----NH---------------HKISAITLVSATSTTANMTVSPEGRWTIASL 283 (306)
T ss_dssp --BBCCCSS----SCEECCBCSSTTCEE----TT---------------EECSCCCEETTCCBC--------CCCCCBCC
T ss_pred EEEEeCCCC----CccEEEEECCcEeee----CC---------------EEcceEEECCCcEEEEEEEcCCCeEEEEEeC
Confidence 999998753 127999999999986 22 4689999999999999999999999999999
Q ss_pred chHhHHccceeeeeccc
Q 012467 421 IEPHFHIGMGVVLALGV 437 (463)
Q Consensus 421 i~~H~~~GM~~~~~~~~ 437 (463)
+++|++.||+++|.+.+
T Consensus 284 ~~~H~~~GM~~~~~V~~ 300 (306)
T 1sdd_A 284 IPRHFQAGMQAYIDIKN 300 (306)
T ss_dssp STTTGGGTCBCCC----
T ss_pred ChHHHhcCCeEEEEEec
Confidence 99999999999997654
|
| >1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.5e-22 Score=216.57 Aligned_cols=246 Identities=16% Similarity=0.187 Sum_probs=141.5
Q ss_pred CCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccce----eeEeeEEecCCceEEEEEecCCCC----
Q 012467 113 CAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQP----FEVDDMDIYSGESYSVLLTTNQDP---- 184 (463)
Q Consensus 113 ~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P----~~~~~l~i~~GeR~dvlV~~~~~~---- 184 (463)
.+.|+|.+++|+++++||+|... ....|+.+|.... .+.||.+... ..+....|.|||+++..+++++..
T Consensus 66 ~pGP~I~~~~Gd~v~v~~~N~l~-~~~siH~HGl~~~-~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~ 143 (647)
T 1sdd_B 66 ILGPVIRAEVDDVIQVRFKNLAS-RPYSLHAHGLSYE-KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPEN 143 (647)
T ss_dssp TSCCCEEEETTCEEEEEECCCSS-SCBCCEEETCC----------------------CCBCTTCCEECCEECCTTTSCCS
T ss_pred CcCceEEEeCCCEEEEEEEECCC-CceEEecCcceeC-CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCC
Confidence 35579999999999999999975 4455666665443 5889987532 223456799999999999998742
Q ss_pred CC----ceEEEEEecCCCCCCCCeE-EEEEeCCCCCCCCCCCCCCCCCCCCCCccccccc-cccc-ccCCCCCCCCccce
Q 012467 185 SY----NYWISAGVRGRKPATPPAL-TLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFS-NKIF-ALMGSPKPPTNFHR 257 (463)
Q Consensus 185 ~g----~y~ir~~~~~~~~~~~~~~-a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~-~~~~-~~~~~~~~p~~~d~ 257 (463)
+| +||.+.............. ++|......... .+..|. .+......+. .... +.. ..... ..
T Consensus 144 ~G~~c~T~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~-----~~~~~~-~~~e~~l~l~~~d~~~~w~-~~~~~---~~ 213 (647)
T 1sdd_B 144 PGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKGTLDK-----ETNMPV-DMREFVLLFMVFDEKKSWY-YDKKP---TR 213 (647)
T ss_dssp SSCSEEEEEEECCSSHHHHHTTTCEEEEEEECTTSSCT-----TSCCCS-SCCEEEEEEEEEEGGGSSC-CC--------
T ss_pred CCCCceEEEEccCCCCcccccccCccCEEEeeCCCccc-----ccCCCC-cceeEEEEEEeecCccccc-cccCc---cc
Confidence 47 9999876531110111223 333333211110 000011 0000000000 0000 000 00000 00
Q ss_pred EEEEEeeeeccCCeEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCC
Q 012467 258 RLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNT 337 (463)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 337 (463)
.+.. ...........+.|||..+.. ..+.++.|+
T Consensus 214 ~~~~-~~~~~~~~~~~~~iNG~~~~~---------------------------------------------p~l~v~~G~ 247 (647)
T 1sdd_B 214 SWRR-ASSEVKNSHEFHAINGMIYNL---------------------------------------------PGLRMYEQE 247 (647)
T ss_dssp -----------CCCEEEEETTBSSCC---------------------------------------------CCCEEETTC
T ss_pred cccc-CCcchhhcCceeccCCEecCC---------------------------------------------CCeEEcCCC
Confidence 0000 000000012346666665410 027789999
Q ss_pred EEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcCCceeeee
Q 012467 338 TVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAF 417 (463)
Q Consensus 338 ~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adnpG~w~~ 417 (463)
+|+|+|.|.+.. .+.||||+|||.|+|++.. +.++||+.|.||+++.|+|++++||.|+|
T Consensus 248 ~vrlrliN~~~~----~~~h~~hlhG~~f~vi~~d----------------~~~~d~v~l~pg~r~~v~~~~~~pG~w~~ 307 (647)
T 1sdd_B 248 WVRLHLLNLGGS----RDIHVVHFHGQTLLENGTQ----------------QHQLGVWPLLPGSFKTLEMKASKPGWWLL 307 (647)
T ss_dssp EEEEEEEECCCT----TCCEEEEETTCCEEECSSS----------------CEEESSEEECTTEEEEEEEECCSSEEEEE
T ss_pred EEEEEEEeCCCC----CcceeEEEcCcEEEEecCC----------------CcccceEEECCCeEEEEEEEeccceEeec
Confidence 999999998743 1279999999999998752 36899999999999999999999999999
Q ss_pred cccchHhHHccceeeeecc
Q 012467 418 HCHIEPHFHIGMGVVLALG 436 (463)
Q Consensus 418 HCHi~~H~~~GM~~~~~~~ 436 (463)
|||+.+|++.||+++|.+.
T Consensus 308 hch~~~h~~~Gm~~~~~V~ 326 (647)
T 1sdd_B 308 DTEVGEIQRAGMQTPFLIV 326 (647)
T ss_dssp ECCCHHHHTTTCEEEEEEE
T ss_pred ccCcccccccccccceeee
Confidence 9999999999999999774
|
| >3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=8.1e-23 Score=199.21 Aligned_cols=149 Identities=14% Similarity=0.141 Sum_probs=115.6
Q ss_pred cccceeEEEeccch------hhhhcceeeEEEEeCCCCCCCCCCCCcceEEEEeeeecccHHHHHhhhcCCCCCCCCCCC
Q 012467 6 QVQAGTYFYHGHLG------MQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQ 79 (463)
Q Consensus 6 ~~~~GT~WYHsH~~------~q~~~Gl~G~lIV~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~d 79 (463)
..++||||||||.. .|+.+||+|+|||+++.+ ..+|+|++|+++||+
T Consensus 112 ~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~----~~~d~e~~l~~~d~t----------------------- 164 (313)
T 3tas_A 112 AGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD----VLPDRTHTIVFNDMT----------------------- 164 (313)
T ss_dssp CCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC----BCCSEEEEEEEETTE-----------------------
T ss_pred CCCceEEEEeecCcccccchhhhhccccCceEeecccc----ccccccceeeccchh-----------------------
Confidence 45789999999953 457899999999998864 457999999999984
Q ss_pred eEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCccc-
Q 012467 80 TLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYV- 158 (463)
Q Consensus 80 ~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v- 158 (463)
+||+...+ .+.+.++.|+++||||+|++ ...+.|+|+||.|+|++.||...
T Consensus 165 ---~Ng~~~~~------------------------~~~l~v~~Ge~vr~~liN~g-~~~hpfHlHGh~F~v~~~~~~~~~ 216 (313)
T 3tas_A 165 ---INNRPAHT------------------------GPDFEATVGDRVEFVMITHG-EYYHTFHLHGHRWADNRTGMLTGP 216 (313)
T ss_dssp ---ETTCCTTC------------------------CCCEEEETTCEEEEEEEEES-SCCEEEEETTCCEESSTTSSCCST
T ss_pred ---cccCCccc------------------------ccccccccCCEEEEEEeccc-ccceeeeecCCeeEEEEECCccCC
Confidence 45554431 12588999999999999999 45789999999999999999876
Q ss_pred --ceeeEeeEEecCCceEEEEEecCC-CCCCceEEEEEecCCCCCCCCeEEEEEeC
Q 012467 159 --QPFEVDDMDIYSGESYSVLLTTNQ-DPSYNYWISAGVRGRKPATPPALTLLNYH 211 (463)
Q Consensus 159 --~P~~~~~l~i~~GeR~dvlV~~~~-~~~g~y~ir~~~~~~~~~~~~~~a~l~y~ 211 (463)
.|..+|++.|.||||++|+|.+.+ +.+|.|.+.-....- ......+++.++
T Consensus 217 ~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG~w~~HCHi~~H--~~~GM~~~f~V~ 270 (313)
T 3tas_A 217 DDPSQVIDNKICGPADSFGFQVIAGEGVGAGAWMYHCHVQSH--SDMGMVGLFLVK 270 (313)
T ss_dssp TCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHH--HHTTCEEEEEEE
T ss_pred CCCCeeeeEEEeCCCcceEEEEEeccCCCCEeEEEEeCChHH--HHCCCeEEEEEE
Confidence 477899999999999999998865 246887766543211 123445666665
|
| >1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 | Back alignment and structure |
|---|
Probab=99.88 E-value=5.8e-24 Score=206.77 Aligned_cols=140 Identities=11% Similarity=0.133 Sum_probs=97.0
Q ss_pred ceeEEEeccchh--hhhcceeeEEEEeCCCC---CCCCCCCCcceEEEEeeeecccHHHHHhhhcCCCCCCCCCCCeEEE
Q 012467 9 AGTYFYHGHLGM--QRSAGLYGSLIVDVADG---EKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLI 83 (463)
Q Consensus 9 ~GT~WYHsH~~~--q~~~Gl~G~lIV~~~~~---~~~p~~~d~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~d~~li 83 (463)
+||||||||... |+.+||+|+|||+++.+ .+.+..+|+|++|+++||.... +.. ...++..+|
T Consensus 139 ~GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~~~~~~~~~~d~e~~l~~~d~d~~~---------~~~---~~~~~~~~I 206 (306)
T 1sdd_A 139 CLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQKMFEKQHVLMFAVFDESK---------SWN---QTSSLMYTV 206 (306)
T ss_dssp EEEEEEECCSSSHHHHHTTCCEEEEEECTTCBCTTSSBSSSCCCCCCBCCEEETTS---------SSS---CCCCEEECS
T ss_pred ceEEEEeccCCchhhhccCceEEEEEccCCCCCccCCcCcccceEEEEEEeccccc---------ccc---cCCCcceee
Confidence 489999999655 88999999999998753 1234567899999999984221 000 124678899
Q ss_pred CCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcc-eEEEEEEeCceeEEEEeCCcccceee
Q 012467 84 NGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTAL-ASLNLAVKNHKMVVVEADGNYVQPFE 162 (463)
Q Consensus 84 NG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~-~~~~~~i~~h~~~via~DG~~v~P~~ 162 (463)
||+... . .+.+++++|+++||||+|++.. ..+.|+|+||.|.+ ||. .
T Consensus 207 NG~~~~--~----------------------~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~---dG~-----~ 254 (306)
T 1sdd_A 207 NGYVNG--T----------------------MPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ---NHH-----K 254 (306)
T ss_dssp SSCCSS--C----------------------CCCCCCCCC------BBCCCSSSCEECCBCSSTTCEE---TTE-----E
T ss_pred CCEecC--C----------------------CcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee---CCE-----E
Confidence 999752 1 1358899999999999999987 56779999999875 883 4
Q ss_pred EeeEEecCCceEEEEEecCCCCCCceEEEEEe
Q 012467 163 VDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 194 (463)
Q Consensus 163 ~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~ 194 (463)
++++.|+||||+||++++++ +|.|++....
T Consensus 255 ~dtv~l~pger~~v~~~~~~--pG~~~~hch~ 284 (306)
T 1sdd_A 255 ISAITLVSATSTTANMTVSP--EGRWTIASLI 284 (306)
T ss_dssp CSCCCEETTCCBC----------CCCCCBCCS
T ss_pred cceEEECCCcEEEEEEEcCC--CeEEEEEeCC
Confidence 88999999999999999986 5888876543
|
| >3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.6e-21 Score=188.60 Aligned_cols=147 Identities=15% Similarity=0.210 Sum_probs=113.3
Q ss_pred cceeEEEeccc------hhhhhcceeeEEEEeCCCCCCCCCCCCcceEEEEeeeecccHHHHHhhhcCCCCCCCCCCCeE
Q 012467 8 QAGTYFYHGHL------GMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTL 81 (463)
Q Consensus 8 ~~GT~WYHsH~------~~q~~~Gl~G~lIV~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~d~~ 81 (463)
++||||||||. ..|+.+||+|+|||+++.+ ..+|+|++|+++||.
T Consensus 130 ~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~----~~~d~e~~l~~~~~~------------------------- 180 (299)
T 3t9w_A 130 TAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGD----LLPKRQFTVVFNDMM------------------------- 180 (299)
T ss_dssp CCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC----CCCSEEEEEEEETTE-------------------------
T ss_pred CceeEEEecCCcccccchhhhcccccceEEEecccc----cCccccceeeeeeee-------------------------
Confidence 78999999994 3478999999999998764 457999999998774
Q ss_pred EECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccc--
Q 012467 82 LINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQ-- 159 (463)
Q Consensus 82 liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~-- 159 (463)
+||+... ..+.+.++.|+++||||||++. ..+.|+|+||.|+|++.|+....
T Consensus 181 -~Ng~~~~------------------------~~p~l~v~~Ge~Vr~~liN~~~-~~HpfHlHGh~F~v~~~g~~~~~~~ 234 (299)
T 3t9w_A 181 -INNRAHH------------------------DAPTFEANLGERVEWIAIGHGS-NFHTFHLHGHRWLDNRTGMRTSEYD 234 (299)
T ss_dssp -ETTCCTT------------------------CCCEEEEETTCEEEEEEEEESS-CCCEEEETTCCEESSSSSSCCSTTC
T ss_pred -ecCcccc------------------------ccccceecCCCEEEEEEEeccc-cceeeeEecceEEEEecccccCCcC
Confidence 5666543 1136899999999999999996 55899999999999999988664
Q ss_pred -eeeEeeEEecCCceEEEEEecCC-CCCCceEEEEEecCCCCCCCCeEEEEEeC
Q 012467 160 -PFEVDDMDIYSGESYSVLLTTNQ-DPSYNYWISAGVRGRKPATPPALTLLNYH 211 (463)
Q Consensus 160 -P~~~~~l~i~~GeR~dvlV~~~~-~~~g~y~ir~~~~~~~~~~~~~~a~l~y~ 211 (463)
+..+|++.|.||||++++|.+.+ +.+|.|.+.-....- ......+++.+.
T Consensus 235 ~~~~~Dtv~v~PGe~~~~~via~~~dnPG~w~~HCHi~~H--~~~GM~~~f~V~ 286 (299)
T 3t9w_A 235 PSPLIDIKDLNPGVSFGFQVIAGEGVGPGMWMYHCHVQNH--SDMGMAGMFLVR 286 (299)
T ss_dssp CCCEESEEECCTTCEEEEEEETTTTTCSEEEEEEECSHHH--HHTTCEEEEEEE
T ss_pred CCCceeeEEeCCceeEEEEEEEeeCCCCeeEEEEcCCHHH--HhcCCeEEEEEE
Confidence 34689999999999999987654 246888776543211 122345666665
|
| >3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=2.1e-21 Score=185.91 Aligned_cols=145 Identities=15% Similarity=0.209 Sum_probs=114.0
Q ss_pred ceeEEEeccc------hhhhhcceeeEEEEeCCCCCCCCCCCCcceEEEEeeeecccHHHHHhhhcCCCCCCCCCCCeEE
Q 012467 9 AGTYFYHGHL------GMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLL 82 (463)
Q Consensus 9 ~GT~WYHsH~------~~q~~~Gl~G~lIV~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~d~~l 82 (463)
+||||||||. ..|+.+||+|+|||+++.+ ...|+|++|+++|| +
T Consensus 109 ~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~----~~~drE~~l~l~~~--------------------------~ 158 (276)
T 3kw8_A 109 AGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD----VLPDATHTIVFNDM--------------------------T 158 (276)
T ss_dssp CEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC----CCCSEEEEEEEETT--------------------------E
T ss_pred CEEEEEecCccccccchhhhhCccEEEEEEecCCC----cccccceEEEeccc--------------------------c
Confidence 7999999996 4799999999999999865 22499999998775 5
Q ss_pred ECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccc---
Q 012467 83 INGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQ--- 159 (463)
Q Consensus 83 iNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~--- 159 (463)
|||+... ..+.|+++.|+++||||+|++. ..+.|+|+||.|.+++ ||....
T Consensus 159 iNG~~~~------------------------~~p~i~v~~G~~vri~l~N~~~-~~Hp~HlHG~~f~v~~-~G~~~~p~~ 212 (276)
T 3kw8_A 159 INNRKPH------------------------TGPDFEATVGDRVEIVMITHGE-YYHTFHMHGHRWADNR-TGILTGPDD 212 (276)
T ss_dssp ETTCCTT------------------------CCCCEEEETTCEEEEEEEEESS-CCEEEEETTCCEESSS-SSSCCSTTC
T ss_pred cceeccc------------------------CCCCEEEecCCEEEEEEecCCC-cceeEEEccceeEEec-cCccCCCcc
Confidence 8998753 1236899999999999999996 5899999999999875 775432
Q ss_pred -eeeEeeEEecCCceEEEEEecCC-CCCCceEEEEEecCCCCCCCCeEEEEEeC
Q 012467 160 -PFEVDDMDIYSGESYSVLLTTNQ-DPSYNYWISAGVRGRKPATPPALTLLNYH 211 (463)
Q Consensus 160 -P~~~~~l~i~~GeR~dvlV~~~~-~~~g~y~ir~~~~~~~~~~~~~~a~l~y~ 211 (463)
+...|++.|.||||+++++++++ +.+|.|++.-....- ......+.+.+.
T Consensus 213 ~~~~~Dtv~v~pg~~~~~~~~~~~~~npG~w~~HCH~~~H--~~~GM~g~~~V~ 264 (276)
T 3kw8_A 213 PSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHVQSH--SDMGMVGLFLVK 264 (276)
T ss_dssp CCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHH--HHTTCEEEEEEE
T ss_pred cccCCccEEeCCCceEEEEEEeccCCCCCeEEEECCCchH--hhCCCeEEEEEe
Confidence 45789999999999999999985 236899988653211 122345666665
|
| >1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A | Back alignment and structure |
|---|
Probab=99.85 E-value=8.3e-21 Score=186.23 Aligned_cols=233 Identities=13% Similarity=0.079 Sum_probs=144.4
Q ss_pred eEEEecCCCeEEEEEEecCcc-eEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEe
Q 012467 116 QILHVQPNKTYRLRIASTTAL-ASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 194 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~-~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~ 194 (463)
++|++++|+++|+|++|.... ..+.++++|. .+.||.+. ...|.|||++++.+++++ +|+||.+...
T Consensus 70 P~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~----~~~dG~~~------~~~i~PG~~~~y~f~~~~--~Gt~wyH~h~ 137 (327)
T 1kbv_A 70 RMIRVREGDTVEVEFSNNPSSTVPHNVDFHAA----TGQGGGAA------ATFTAPGRTSTFSFKALQ--PGLYIYHCAV 137 (327)
T ss_dssp CBEEEETTCEEEEEEEECTTCSSCBCCEETTC----CSGGGGTT------TTCBCTTEEEEEEEECCS--CEEEEEECCC
T ss_pred CeEEEeCCCEEEEEEEECCCCCCceeeEeCcc----ccCCCCCc------ceeecCCCEEEEEEECCC--CeEEEEEeCC
Confidence 479999999999999999753 4566777664 25788753 224899999999999986 6999998653
Q ss_pred cCCCCC-CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeeeeccCCeEE
Q 012467 195 RGRKPA-TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTK 273 (463)
Q Consensus 195 ~~~~~~-~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~ 273 (463)
.....+ .....+.+.+.+.. .. |..+. . ....+..... ..... ......+............
T Consensus 138 ~~~~~~~~~Gl~G~~iV~~~~-------~~---p~~d~-e----~~l~~~d~~~-~~~~~-~~g~~~~~~~~~~~~~~~~ 200 (327)
T 1kbv_A 138 APVGMHIANGMYGLILVEPKE-------GL---PKVDK-E----FYIVQGDFYT-KGKKG-AQGLQPFDMDKAVAEQPEY 200 (327)
T ss_dssp SSHHHHHHTTCEEEEEEECTT-------CC---CCCSE-E----EEEEEEEECB-SSCTT-CCEEECBCHHHHHHTCCSE
T ss_pred CChhhhhhcceEEEEEEecCC-------CC---CCCce-E----EEEEeeeeec-cCccc-cccccccChhHhccCCCce
Confidence 210001 11223333333211 01 11110 0 0000000000 00000 0000000000000001124
Q ss_pred EEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCCCCC
Q 012467 274 WAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNL 353 (463)
Q Consensus 274 ~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~ 353 (463)
+.|||..+... +...+.++.|++++|+|.|.+..
T Consensus 201 ~~iNG~~~~~~------------------------------------------~~~~l~v~~G~~vRlRliN~~~~---- 234 (327)
T 1kbv_A 201 VVFNGHVGALT------------------------------------------GDNALKAKAGETVRMYVGNGGPN---- 234 (327)
T ss_dssp EEETTSTTTTS------------------------------------------GGGCEEEETTEEEEEEEEEEESS----
T ss_pred EEEcCcccCCC------------------------------------------CceeEEeCCCCEEEEEEECCCCC----
Confidence 56666654210 00138899999999999998743
Q ss_pred CCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcCCceeeeecccchHhH-Hccceee
Q 012467 354 SEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHF-HIGMGVV 432 (463)
Q Consensus 354 ~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adnpG~w~~HCHi~~H~-~~GM~~~ 432 (463)
..|+||||||.|+|++.. |.+ .+|.++|++.|.+|+++.|.|++++||.|++|||+..|. ..||+++
T Consensus 235 -~~~~~~l~Gh~f~vi~~D-G~~----------~~p~~~d~l~l~pGer~dv~v~~~~pG~y~l~~h~~~~~~~~g~~a~ 302 (327)
T 1kbv_A 235 -LVSSFHVIGEIFDKVYVE-GGK----------LINENVQSTIVPAGGSAIVEFKVDIPGNYTLVDHSIFRAFNKGALGQ 302 (327)
T ss_dssp -CCEEEEEETCCBSEEEGG-GSS----------CEECSBSEEEECTTEEEEEEEEECSCEEEEEEESSTHHHHHSSCEEE
T ss_pred -CceeEEEeCCEEEEEEcC-CCc----------CCCCceeEEEECCCCEEEEEEEeCCCeEEEEEeccccccccCCcEEE
Confidence 189999999999999984 332 226789999999999999999999999999999999995 8899888
Q ss_pred eec
Q 012467 433 LAL 435 (463)
Q Consensus 433 ~~~ 435 (463)
+..
T Consensus 303 l~~ 305 (327)
T 1kbv_A 303 LKV 305 (327)
T ss_dssp EEE
T ss_pred EEE
Confidence 864
|
| >2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* | Back alignment and structure |
|---|
Probab=99.84 E-value=3.7e-22 Score=215.11 Aligned_cols=85 Identities=20% Similarity=0.419 Sum_probs=76.8
Q ss_pred EEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcC
Q 012467 331 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 410 (463)
Q Consensus 331 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~ad 410 (463)
+.++.|++|+|+|.|.+.+ .+.||||||||.|+|++.+ +.++||+.|+||+++.|+|+++
T Consensus 370 l~v~~Ge~vr~rliN~g~~----~~~H~fHlhGh~f~Vv~~d----------------g~~~Dtv~l~Pg~~~~v~~~ad 429 (770)
T 2r7e_B 370 LVMAQDQRIRWYLLSMGSN----ENIHSIHFSGHVFTVRKKE----------------EYKMALYNLYPGVFETVEMLPS 429 (770)
T ss_dssp CCCCSSSCEEEECCCCCSS----SCCCEEEBSSCCEECCSSS----------------CCEESEEECCTTCCCEEEECCS
T ss_pred eEEeCCCEEEEEEEeCCCC----cceEEEEEcCCEEEEEecC----------------CceeeEEEECCCeEEEEEEEeC
Confidence 6789999999999998643 2379999999999998763 2489999999999999999999
Q ss_pred CceeeeecccchHhHHccceeeeec
Q 012467 411 NPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 411 npG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
+||.|+||||+++|++.||++.|.+
T Consensus 430 ~pG~w~~hcH~~~H~~~GM~~~~~V 454 (770)
T 2r7e_B 430 KAGIWRVECLIGEHLHAGMSTLFLV 454 (770)
T ss_dssp SCBCCCBCCCSHHHHTTBCCCCCCB
T ss_pred CCCceEEEecccccccccccccccc
Confidence 9999999999999999999999976
|
| >2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... | Back alignment and structure |
|---|
Probab=99.84 E-value=3e-20 Score=183.52 Aligned_cols=88 Identities=26% Similarity=0.337 Sum_probs=75.1
Q ss_pred EEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCC--ccceEEeCCCcEEEEEEE
Q 012467 331 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPP--LKNTAVIFPYGWTALRFV 408 (463)
Q Consensus 331 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~--~rDTv~v~~~g~~~irf~ 408 (463)
+.++.|++++|++.|.+.. .|++|+|||.|+|+. +|.+. +++ ++||+.|.+|+.+.|.|+
T Consensus 233 l~v~~G~r~Rl~n~~~~~~------~~~~~i~gh~~~Vi~--dG~~~----------~~p~~~~dtv~l~pGer~~v~v~ 294 (340)
T 2bw4_A 233 LTAAVGERVLVVHSQANRD------TRPHLIGGHGDYVWA--TGKFR----------NPPDLDQETWLIPGGTAGAAFYT 294 (340)
T ss_dssp EEEETTCEEEEEEEESSSC------BCEEEETCCEEEEET--TCCTT----------SCCEEEESCCCBCTTEEEEEEEE
T ss_pred eEcCCCCEEEEEECCCCCc------cceEEecCcceEEeC--CCccc----------CCccccceEEEeCCCceEEEEEE
Confidence 8899999999888877655 889999999999986 44432 223 479999999999999999
Q ss_pred cCCceeeeecccch-HhHHccceeeeecc
Q 012467 409 ADNPGAWAFHCHIE-PHFHIGMGVVLALG 436 (463)
Q Consensus 409 adnpG~w~~HCHi~-~H~~~GM~~~~~~~ 436 (463)
+++||.|+||||++ +|++.|||+.|.+.
T Consensus 295 ~~~pG~y~~~~h~~~~h~~~Gm~~~~~V~ 323 (340)
T 2bw4_A 295 FRQPGVYAYVNHNLIEAFELGAAGHFKVT 323 (340)
T ss_dssp CCSCEEEEEEESSHHHHHTTSCEEEEEEE
T ss_pred CCCCeeeEEEcCchHHHHhCCCEEEEEEC
Confidence 99999999999999 59999999988643
|
| >2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.9e-21 Score=209.64 Aligned_cols=158 Identities=15% Similarity=0.150 Sum_probs=116.6
Q ss_pred cccccc----------cceeEEEeccchh--hhhcceeeEEEEeCCCCCCC---CCCCCcceEEEEee------eecccH
Q 012467 2 LDVWQV----------QAGTYFYHGHLGM--QRSAGLYGSLIVDVADGEKE---PFHYDGEFNLLLSD------WWHRSV 60 (463)
Q Consensus 2 ~~~~~~----------~~GT~WYHsH~~~--q~~~Gl~G~lIV~~~~~~~~---p~~~d~e~~l~l~D------~~~~~~ 60 (463)
|+|.+. ++||||||||... |+.+||+|+|||+++..... +..+|+|++|++++ |+++..
T Consensus 253 Y~f~~~~~~gp~~~d~~~Gt~wYHsh~~~~~q~~~GL~G~liV~~~~~~~~~~~~~~~d~E~vl~~~~~de~~swy~~~~ 332 (770)
T 2r7e_B 253 YFWKVQHHMAPTKDEFDCKAWAYSSDVDLEKDVHSGLIGPLLVCHTNTLNPAHGRQVTVQEFALFFTIFDETKSWYFTEN 332 (770)
T ss_dssp EECCCCSSSSCCSSCCSEEEEEECCCSSSSHHHHTSCCEEEEEECSTTSCSSSCCCCSSEEEECCCCEECCSSSSCTTGG
T ss_pred EEEEecCccCCccCCCCCeeEEeeccCCcHHHHhCCceeeEEECCCcccccccCCCccceEEEEEEeecCccccchhccc
Confidence 677777 8999999999665 89999999999999864210 12357999988754 555432
Q ss_pred HHHHhhhcCCC-------CCCCCCCCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEec
Q 012467 61 HEQEVGLSSRP-------LRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIAST 133 (463)
Q Consensus 61 ~~~~~~~~~~~-------~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa 133 (463)
... +...+ ..+....+..+|||+... . .+.+++++|++|||||+|+
T Consensus 333 ~~~---~~~~p~~~~~~d~~~~~~~~~~~ING~~~~--~----------------------~~~l~v~~Ge~vr~rliN~ 385 (770)
T 2r7e_B 333 MER---NCRAPCNIQMEDPTFKENYRFHAINGYIMD--T----------------------LPGLVMAQDQRIRWYLLSM 385 (770)
T ss_dssp GSS---CSCCSSCCCSSSSSSTTTSCEECTTSCTTT--T----------------------CCCCCCCSSSCEEEECCCC
T ss_pred hhh---cccCccccccCCccccccCCccccCCccCC--C----------------------CCCeEEeCCCEEEEEEEeC
Confidence 111 11000 011123455789998642 1 1357899999999999999
Q ss_pred Ccc-eEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEE
Q 012467 134 TAL-ASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAG 193 (463)
Q Consensus 134 ~~~-~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~ 193 (463)
+.. ..+.|+|+||.|+|++.||. .+|++.|.||||++|++++++ +|.|.+...
T Consensus 386 g~~~~~H~fHlhGh~f~Vv~~dg~-----~~Dtv~l~Pg~~~~v~~~ad~--pG~w~~hcH 439 (770)
T 2r7e_B 386 GSNENIHSIHFSGHVFTVRKKEEY-----KMALYNLYPGVFETVEMLPSK--AGIWRVECL 439 (770)
T ss_dssp CSSSCCCEEEBSSCCEECCSSSCC-----EESEEECCTTCCCEEEECCSS--CBCCCBCCC
T ss_pred CCCcceEEEEEcCCEEEEEecCCc-----eeeEEEECCCeEEEEEEEeCC--CCceEEEec
Confidence 875 47899999999999999974 789999999999999999986 588776544
|
| >3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.1e-19 Score=178.89 Aligned_cols=147 Identities=15% Similarity=0.203 Sum_probs=113.8
Q ss_pred cceeEEEeccc------hhhhhcceeeEEEEeCCCCCCCCCCCCcceEEEEeeeecccHHHHHhhhcCCCCCCCCCCCeE
Q 012467 8 QAGTYFYHGHL------GMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTL 81 (463)
Q Consensus 8 ~~GT~WYHsH~------~~q~~~Gl~G~lIV~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~d~~ 81 (463)
++||||||||. ..|+.+||+|+|||+++.+ ..+|+|++|+++||
T Consensus 149 ~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~----~~pd~e~~l~~~d~-------------------------- 198 (343)
T 3cg8_A 149 SAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD----VLPDATHTIVFNDM-------------------------- 198 (343)
T ss_dssp SCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC----CCCSEEEEEEEETT--------------------------
T ss_pred CceEEEEecCccccccchhhhhcCCeEEEEEecCCC----CCCCceEEEEcccc--------------------------
Confidence 35999999995 4799999999999998865 23689999999876
Q ss_pred EECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccc--
Q 012467 82 LINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQ-- 159 (463)
Q Consensus 82 liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~-- 159 (463)
+|||+..+ ..+.|.++.|++|||||+|.+. ..+.|+|+||.|+|+ .||.+..
T Consensus 199 ~iNG~~~~------------------------~~~~l~v~~Ge~vri~l~N~g~-~~HpfHlHGh~f~v~-~~G~~~~p~ 252 (343)
T 3cg8_A 199 TINNRKPH------------------------TGPDFEATVGDRVEIVMITHGE-YYHTFHMHGHRWADN-RTGILTGPD 252 (343)
T ss_dssp EETTCCTT------------------------CCCCEEEETTCEEEEEEEEESS-CCEEEEETTCCEESS-SSSSCCSTT
T ss_pred eecccCCC------------------------CCccEEeCCCCEEEEEEEcCCc-cccccEecCcEEEEe-ccCcccCCC
Confidence 58998643 1136899999999999999996 689999999999997 4776543
Q ss_pred --eeeEeeEEecCCceEEEEEecCC-CCCCceEEEEEecCCCCCCCCeEEEEEeCC
Q 012467 160 --PFEVDDMDIYSGESYSVLLTTNQ-DPSYNYWISAGVRGRKPATPPALTLLNYHP 212 (463)
Q Consensus 160 --P~~~~~l~i~~GeR~dvlV~~~~-~~~g~y~ir~~~~~~~~~~~~~~a~l~y~~ 212 (463)
+...|++.|.||||++|++++++ +.+|.|++.-....- ......+.+.+.+
T Consensus 253 ~~~~~~Dtv~v~PG~~~~v~~~~~~~~~pG~w~~HCHi~~H--~~~GM~g~~~V~~ 306 (343)
T 3cg8_A 253 DPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHVQSH--SDMGMVGLFLVKK 306 (343)
T ss_dssp CCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHH--HHTTCEEEEEEEC
T ss_pred CcccceeeEEeCCCCEEEEEEEECCCCCCeeEEEeCCCHHH--HhccCcEEEEEec
Confidence 35679999999999999999853 346888876553211 1233566777763
|
| >1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A | Back alignment and structure |
|---|
Probab=99.81 E-value=7.2e-19 Score=173.10 Aligned_cols=89 Identities=21% Similarity=0.171 Sum_probs=72.2
Q ss_pred EEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCC-ccceEEeCCCcEEEEEEEc
Q 012467 331 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPP-LKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 331 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~-~rDTv~v~~~g~~~irf~a 409 (463)
+.++.|++++|++.|.+.. .|++++|||.|.|++ +|.+. ..|. ++||+.|.+|+.+.|.|++
T Consensus 227 l~v~~Ger~Rl~n~~~~~~------~~~h~i~~h~~~Vi~--dG~~~---------~~p~~~~dtv~l~pGer~~v~v~a 289 (333)
T 1mzy_A 227 LKAKVGDNVLFVHSQPNRD------SRPHLIGGHGDLVWE--TGKFH---------NAPERDLETWFIRGGTAGAALYKF 289 (333)
T ss_dssp EEEETTCEEEEEEEESSSC------BCEEEETCCEEEEET--TCCTT---------SCCEEEESBCCBCTTEEEEEEEEC
T ss_pred eEecCCCEEEEEECCCCCc------cccEEECCCCeEEEe--CCccc---------CCCccCcceEEECCCceEEEEEEc
Confidence 8899999999887776543 445557788888887 45542 1122 5899999999999999999
Q ss_pred CCceeeeecccchHhH-Hccceeeeecc
Q 012467 410 DNPGAWAFHCHIEPHF-HIGMGVVLALG 436 (463)
Q Consensus 410 dnpG~w~~HCHi~~H~-~~GM~~~~~~~ 436 (463)
++||.|+||||++.|+ +.|||++|.+.
T Consensus 290 ~~pG~y~~~ch~~~h~~~~Gm~~~~~v~ 317 (333)
T 1mzy_A 290 LQPGVYAYVNHNLIEAVHKGATAHVLVE 317 (333)
T ss_dssp CSCEEEEEEESSHHHHHTTCCEEEEEEE
T ss_pred CCCEEEEEecChhhhHhhCCCEEEEEEc
Confidence 9999999999999997 99999999654
|
| >2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=5.2e-20 Score=198.07 Aligned_cols=156 Identities=15% Similarity=0.121 Sum_probs=111.3
Q ss_pred ccccccc----------ceeEEEeccch--hhhhcceeeEEEEeCCCCC---CCCCCCCcceEEEEee------eecccH
Q 012467 2 LDVWQVQ----------AGTYFYHGHLG--MQRSAGLYGSLIVDVADGE---KEPFHYDGEFNLLLSD------WWHRSV 60 (463)
Q Consensus 2 ~~~~~~~----------~GT~WYHsH~~--~q~~~Gl~G~lIV~~~~~~---~~p~~~d~e~~l~l~D------~~~~~~ 60 (463)
|+|.+.+ +||||||||.. .|+++||+|+|||+++.+. ..+..+|+|++|++++ |+++..
T Consensus 512 Y~f~~~~~agPg~~d~~~gT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~d~E~~l~~~~fde~~~wy~~~~ 591 (742)
T 2r7e_A 512 YKWTVTVEDGPTKSDPRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGNQIMSDKRNVILFSVFDENRSWYLTEN 591 (742)
T ss_dssp CEEECCSTTSCCSSSCSCCCCEEECCSSSSSTGGGSCCEECCCBCCCSCCCCCCSSCCSCCCEEEECBCCGGGSSCSHHH
T ss_pred EEEEeccccCCcccCCCceEEEEecCcchhhhhhccceeeEEEcCccccccccCcCCCCceEEEEeeccccccccccccc
Confidence 6777654 35999999954 4689999999999987531 1244668999999965 554332
Q ss_pred HHHHhhhcCCCCC-------CCCCCCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEec
Q 012467 61 HEQEVGLSSRPLR-------WIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIAST 133 (463)
Q Consensus 61 ~~~~~~~~~~~~~-------~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa 133 (463)
... +...+.. +.......+|||+... . . .+.+++|++|||||||+
T Consensus 592 ~~~---~~~~p~~v~~~~~~~~~~~~~~~ING~~~~--~---------------------~--~l~v~~Ge~vr~rliN~ 643 (742)
T 2r7e_A 592 IQR---FLPNPAGVQLEDPEFQASNIMHSINGYVFD--S---------------------L--QLSVCLHEVAYWYILSI 643 (742)
T ss_dssp HHH---HSSSSSCSCCCCHHHHGGGCCBCTTTTCSS--C---------------------C--CCCCCSSCCCEEEEEEC
T ss_pred hhh---cccCchhcccccccccccCceeeecCcCCC--C---------------------C--cEEEeCCCEEEEEEEeC
Confidence 111 1100000 0001123578998642 0 1 27899999999999998
Q ss_pred Ccc-eEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEec
Q 012467 134 TAL-ASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVR 195 (463)
Q Consensus 134 ~~~-~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~ 195 (463)
|+. ..+.|+|+||.|+|+ |..+|+|.|.||||++|+|++++ +|.|.+.....
T Consensus 644 g~~~~~h~~HlhGh~f~v~--------~~~~Dtv~l~Pg~~~~v~~~ad~--pG~w~~hcH~~ 696 (742)
T 2r7e_A 644 GAQTDFLSVFFSGYTFKHK--------MVYEDTLTLFPFSGETVFMSMEN--PGLWILGCHNS 696 (742)
T ss_dssp SSCCCCCCCEESSSCCCCB--------SSSBCSSCCCCCSSEECCEECCC--CCCSCCEECCC
T ss_pred CCCcceEEEEEcCcEEEEe--------ccceeEEEECCCcEEEEEEEcCC--CeEEEEEeCCc
Confidence 765 458999999999987 56789999999999999999986 58988876643
|
| >2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} | Back alignment and structure |
|---|
Probab=99.74 E-value=2.6e-17 Score=168.33 Aligned_cols=233 Identities=11% Similarity=0.062 Sum_probs=144.2
Q ss_pred eEEEecCCCeEEEEEEecCcc-eEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEe
Q 012467 116 QILHVQPNKTYRLRIASTTAL-ASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 194 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~-~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~ 194 (463)
++|+++.|+++++||+|.... ..+.++++|+. ..||... ...|.||+++++.+++++ +|+||.....
T Consensus 60 p~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~----~~dG~~~------~~~i~pg~~~~y~f~~~~--~Gt~~yH~H~ 127 (442)
T 2zoo_A 60 SFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVT----GPGGGAE------SSFTAPGHTSTFNFKALN--PGLYIYHCAT 127 (442)
T ss_dssp CBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGGG------GCCBCTTCEEEEEEECCS--CEEEEEECCC
T ss_pred CcEEEeCCCEEEEEEEECCCCCCCCCEEecCCc----CCCCCCc------cEEECCCCEEEEEEEcCC--CeEEEEecCC
Confidence 479999999999999999642 46778888864 3677653 235899999999999975 7999998642
Q ss_pred cCCCCC-CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeeeeccCCeEE
Q 012467 195 RGRKPA-TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTK 273 (463)
Q Consensus 195 ~~~~~~-~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~ 273 (463)
.....+ .....+.|.+++... . |.++ .++...+.......... .. ....+............
T Consensus 128 ~~~~~~~~~Gl~G~~iv~~~~~-------~---~~~d-----~e~~l~l~d~~~~~~~~-~~-~~~~~~~~~~~~~~~~~ 190 (442)
T 2zoo_A 128 APVGMHIANGMYGLILVEPKEG-------L---APVD-----REYYLVQGDFYTKGEFG-EA-GLQPFDMAKAIDEDADY 190 (442)
T ss_dssp SSHHHHHHTTCEEEEEEECTTC-------C---CCCS-----EEEEEEEEEECBSSCTT-CC-EEECBCHHHHHTTCCSE
T ss_pred CChHHHHhCccEEEEEEeCCCC-------C---CCCC-----ceEEEEeeeeeccCccc-cc-ccccCChhHhccCCCCE
Confidence 111001 122344454442110 0 1100 00000000000000000 00 00000000000000123
Q ss_pred EEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCCCCC
Q 012467 274 WAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNL 353 (463)
Q Consensus 274 ~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~ 353 (463)
+.|||..+... ....+.++.|++++|.|.|.+..
T Consensus 191 ~liNG~~~~~~------------------------------------------~~~~l~v~~G~~vrlrliN~~~~---- 224 (442)
T 2zoo_A 191 VVFNGSVGSTT------------------------------------------DENSLTAKVGETVRLYIGNGGPN---- 224 (442)
T ss_dssp EEETTSTTTTS------------------------------------------GGGCEEEETTCEEEEEEEEEESS----
T ss_pred EEECCCcCCCC------------------------------------------CCCceEeCCCCEEEEEEEeCCCC----
Confidence 45666543100 00137889999999999997643
Q ss_pred CCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcCCceeeeecccchHh-HHccceee
Q 012467 354 SEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPH-FHIGMGVV 432 (463)
Q Consensus 354 ~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adnpG~w~~HCHi~~H-~~~GM~~~ 432 (463)
..|+||+||+.|.|++.. |.. ..|.+.|++.|.+|+...|.|++++||.|++|||...| ...||+++
T Consensus 225 -~~~~~~i~g~~~~vi~~D-G~~----------~~p~~~~~~~l~pg~r~~v~v~~~~~G~y~~~~~~~~~~~~~g~~a~ 292 (442)
T 2zoo_A 225 -LVSSFHVIGEIFDTVYVE-GGS----------LKNHNVQTTLIPAGGAAIVEFKVEVPGTFILVDHSIFRAFNKGALAM 292 (442)
T ss_dssp -CCEEEEEETCCBSEEEGG-GSS----------CEECSBSEEEECTTEEEEEEEECCSCEEEEEEESSTHHHHTTSCEEE
T ss_pred -CceeeEEcCCEEEEEecC-Ccc----------CCCccceEEEECCCeeEEEEEEcCCCCeEEEEecccccccccCceEE
Confidence 189999999999999984 432 12678999999999999999999999999999999999 58999988
Q ss_pred eec
Q 012467 433 LAL 435 (463)
Q Consensus 433 ~~~ 435 (463)
|..
T Consensus 293 l~v 295 (442)
T 2zoo_A 293 LKV 295 (442)
T ss_dssp EEE
T ss_pred EEe
Confidence 853
|
| >1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... | Back alignment and structure |
|---|
Probab=99.74 E-value=8.2e-17 Score=158.61 Aligned_cols=89 Identities=27% Similarity=0.332 Sum_probs=72.6
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCC--ccceEEeCCCcEEEEEE
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPP--LKNTAVIFPYGWTALRF 407 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~--~rDTv~v~~~g~~~irf 407 (463)
.+.++.|++++|+..+.+.. .+++++|||.|.|+. +|.+. +|+ +.||+.|++|+.+.+.|
T Consensus 226 ~l~v~~GervRlin~~~~~~------~~~~~i~gh~~~Vi~--DG~~~----------~p~~~~~dtv~i~pGer~dvlv 287 (336)
T 1oe1_A 226 ALTAKVGETVLLIHSQANRD------TRPHLIGGHGDWVWE--TGKFA----------NPPQRDLETWFIRGGSAGAALY 287 (336)
T ss_dssp CEEEETTCEEEEEEEESSSC------BCEEETTCCEEEEET--TCCTT----------SCCEEEESBCCBCTTEEEEEEE
T ss_pred ceEcCCCCEEEEEecCCCCc------cceEEECCcCceEeC--CCcCc----------CCccccceEEEECCCCcEEEEE
Confidence 48899999999866555443 566667999999995 55442 232 47999999999999999
Q ss_pred EcCCceeeeecccchHhH-Hccceeeeecc
Q 012467 408 VADNPGAWAFHCHIEPHF-HIGMGVVLALG 436 (463)
Q Consensus 408 ~adnpG~w~~HCHi~~H~-~~GM~~~~~~~ 436 (463)
++++||.|+||||.+.|. +.||+++|.+.
T Consensus 288 ~~~~pG~y~~~~h~~~~~~~~G~~~~~~V~ 317 (336)
T 1oe1_A 288 TFKQPGVYAYLNHNLIEAFELGAAGHIKVE 317 (336)
T ss_dssp ECCSCEEEEEEESSHHHHHTTSCEEEEEEE
T ss_pred EcCCCceEEEEechhhccccCCCeEEEEEC
Confidence 999999999999999986 99999999654
|
| >2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A | Back alignment and structure |
|---|
Probab=99.26 E-value=1.5e-11 Score=125.28 Aligned_cols=218 Identities=17% Similarity=0.216 Sum_probs=131.5
Q ss_pred eEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEec
Q 012467 116 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVR 195 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~ 195 (463)
|+|++++|+++++|+.|.-. ....++.+|..+.- ..||.++ .|.|||+++..++++++..|+||......
T Consensus 47 P~i~~~~Gd~v~v~~~N~l~-~~tsiHwHG~~~~~-~~DG~~~--------~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~ 116 (439)
T 2xu9_A 47 PTLRVRPRDTVRLTLENRLP-EPTNLHWHGLPISP-KVDDPFL--------EIPPGESWTYEFTVPKELAGTFWYHPHLH 116 (439)
T ss_dssp CEEEECTTCEEEEEEEECSS-SCBCCEEETCCCCT-TTSCTTC--------CBCTTCEEEEEEECCSSCCEEEEEECCCT
T ss_pred CEEEEeCCCEEEEEEEECCC-CCcceEeCCCCCCc-cccCCcc--------cCCCCCeEEEEEecCCCCCcceEeccCCC
Confidence 58999999999999999975 34556666654322 5688642 38999999999998643579999987643
Q ss_pred CCC-CC-CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeeeeccCCeEE
Q 012467 196 GRK-PA-TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTK 273 (463)
Q Consensus 196 ~~~-~~-~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~ 273 (463)
... .+ .....+.|.+++.... . |. ...++++.+.+. .
T Consensus 117 ~~t~~q~~~Gl~G~liV~~~~~~------~---~~------------------------~~~~~e~~l~l~--------D 155 (439)
T 2xu9_A 117 GRVAPQLFAGLLGALVVESSLDA------I---PE------------------------LREAEEHLLVLK--------D 155 (439)
T ss_dssp TSHHHHHHTTCCEEEEECCGGGG------S---HH------------------------HHTSEEEEEEEE--------E
T ss_pred CchHHHHHhhCeEEEEEcCcccc------C---cc------------------------CCCCCcEEEEEE--------e
Confidence 211 01 1123344444421000 0 00 001233333332 1
Q ss_pred EEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCCCCC
Q 012467 274 WAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNL 353 (463)
Q Consensus 274 ~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~ 353 (463)
|..+........ .+..+ .+.. +..+ .+.+ . ....+.++.| +++|.|.|.+...
T Consensus 156 ~~~~~~~~~~~~--~~~~~-~g~~--------~~~~----~iNG-------~-~~p~l~v~~g-~~RlRliN~~~~~--- 208 (439)
T 2xu9_A 156 LALQGGRPAPHT--PMDWM-NGKE--------GDLV----LVNG-------A-LRPTLVAQKA-TLRLRLLNASNAR--- 208 (439)
T ss_dssp ECEETTEECCCC--HHHHH-HCCC--------CSEE----EETT-------E-ESCEEECSSS-EEEEEEEECCSSC---
T ss_pred eeeCCCCcCCCC--ccccc-cCCC--------CCEE----EECC-------c-cCCcEEecCC-eEEEEEEecCCCc---
Confidence 333321000000 00000 0000 0000 0000 0 0124889999 9999999988652
Q ss_pred CCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcCCceeeeecccchH
Q 012467 354 SEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEP 423 (463)
Q Consensus 354 ~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adnpG~w~~HCHi~~ 423 (463)
.|.||+|||.|+|++. +|.+- ..|...|++.|.+|+...|.++++++|.|.++|+...
T Consensus 209 --~~~~~i~gh~~~vi~~-DG~~~---------~~p~~~~~l~l~pgeR~dv~v~~~~~G~~~l~~~~~~ 266 (439)
T 2xu9_A 209 --YYRLALQDHPLYLIAA-DGGFL---------EEPLEVSELLLAPGERAEVLVRLRKEGRFLLQALPYD 266 (439)
T ss_dssp --CEEEEETTBCEEEEEE-TTEEE---------EEEEEESCEEECTTCEEEEEEECCSSEEEEEEEECCC
T ss_pred --eEEEEECCceEEEEec-CCCCC---------CCceEeceEEECCceeEEEEEEcCCCceEEEEecccc
Confidence 7999999999999998 44321 2356789999999999999999999999999998543
|
| >3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A | Back alignment and structure |
|---|
Probab=99.15 E-value=7.5e-11 Score=95.32 Aligned_cols=84 Identities=14% Similarity=0.104 Sum_probs=65.2
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.+.++.|++|+| .|.+.. .|+||+||..+... .|. +.. ....++..|.||+...++|.+
T Consensus 20 ~i~v~~Gd~V~~--~N~~~~------~H~v~~~~~~~~~~---~g~----~~~------~~~~~~~~i~pG~~~~~~f~~ 78 (105)
T 3cvb_A 20 NVTVHPGDTVKW--VNNKLP------PHNILFDDKQVPGA---SKE----LAD------KLSHSQLMFSPGESYEITFSS 78 (105)
T ss_dssp EEEECTTEEEEE--EECSSC------CEEEEECTTSSGGG---CHH----HHH------HHCEEEEECSTTCEEEEEECT
T ss_pred EEEEcCCCEEEE--EECCCC------CCeEEEeCCCCCcc---ccc----ccc------cccccccccCCCCeEEEEEec
Confidence 489999999976 477666 89999999876431 000 000 012578899999999999998
Q ss_pred -CCceeeeecccchHhHHccceeeeecc
Q 012467 410 -DNPGAWAFHCHIEPHFHIGMGVVLALG 436 (463)
Q Consensus 410 -dnpG~w~~HCHi~~H~~~GM~~~~~~~ 436 (463)
++||.|.|||| .|...||.+.|.+.
T Consensus 79 ~~~~G~y~y~C~--~H~~~GM~G~i~V~ 104 (105)
T 3cvb_A 79 DFPAGTYTYYCA--PHRGAGMVGKITVE 104 (105)
T ss_dssp TSCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CCCCeeEEEEeC--CchhcCCEEEEEEc
Confidence 79999999999 79999999988753
|
| >2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus} | Back alignment and structure |
|---|
Probab=99.10 E-value=9.1e-11 Score=99.97 Aligned_cols=94 Identities=17% Similarity=0.255 Sum_probs=69.8
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEe------ecCC---CCCccccccCCCCCCCccceEEeCCC
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLG------RGEG---KFTKEDEKKFNLKNPPLKNTAVIFPY 400 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~------~g~g---~~~~~~~~~~n~~~p~~rDTv~v~~~ 400 (463)
.+.++.|++|+|+|.|.+.+. .|.||+|+....+.. ...+ .+.+. -....++||..|.+|
T Consensus 36 ~i~v~~G~~V~~~~~N~~~~~-----~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~------~~~~~~~~t~~l~pG 104 (139)
T 2aan_A 36 ELTVSAGQTVTIRFKNNSAVQ-----QHNWILVKGGEAEAANIANAGLSAGPAANYLPA------DKSNIIAESPLANGN 104 (139)
T ss_dssp EEEECTTCEEEEEEECCCSSC-----CBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCS------CCTTEEEECCCBCTT
T ss_pred eEEECCCCEEEEEEEeCCCCC-----CeeEEEeccccccchhhhhhhhcccccccccCc------ccccccccccccCCC
Confidence 388999999999999987531 599999886531110 0000 11100 011257899999999
Q ss_pred cEEEEEEEcCCceeeeecccchHhHHccceeeeec
Q 012467 401 GWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 401 g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
+...|.|++++||.|.||||+..|.. ||+..|.+
T Consensus 105 et~~v~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V 138 (139)
T 2aan_A 105 ETVEVTFTAPAAGTYLYICTVPGHYP-LMQGKLVV 138 (139)
T ss_dssp CEEEEEEECCSSEEEEEECCSTTTTT-TSEEEEEE
T ss_pred CEEEEEEECCCCeEEEEEcCCCChHH-cCEEEEEE
Confidence 99999999999999999999999999 99998865
|
| >1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=2.8e-09 Score=111.57 Aligned_cols=230 Identities=10% Similarity=0.108 Sum_probs=134.4
Q ss_pred eEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEE-EeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEe
Q 012467 116 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVV-EADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 194 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~vi-a~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~ 194 (463)
|+|+++.|+++++++.|........++.+|..+.-- ..||++-. ..-.|.||+++...+++++ .|+||.....
T Consensus 34 P~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~v----tq~~I~PG~s~tY~f~~~~--~GT~wYHsH~ 107 (552)
T 1aoz_A 34 PTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASI----SQCAINPGETFFYNFTVDN--PGTFFYHGHL 107 (552)
T ss_dssp CCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTT----TBCCBCTTCEEEEEEECCS--CEEEEEEECS
T ss_pred CcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCccc----ccCCcCCCCeEEEEEECCC--CEEEEEEECc
Confidence 589999999999999999864556667766432111 16888742 2345789999999999954 7999999875
Q ss_pred cCCCCCCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeeeec-------
Q 012467 195 RGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNT------- 267 (463)
Q Consensus 195 ~~~~~~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~------- 267 (463)
... ......+.|..++.... ..| .+ .|+++.+.+....
T Consensus 108 ~~q--~~~Gl~G~liV~~~~~~-----~~~-~~---------------------------~d~e~~l~l~Dw~~~~~~~~ 152 (552)
T 1aoz_A 108 GMQ--RSAGLYGSLIVDPPQGK-----KEP-FH---------------------------YDGEINLLLSDWWHQSIHKQ 152 (552)
T ss_dssp TTT--GGGTCEEEEEEECCTTC-----CCS-SC---------------------------CSEEEEEEEEEECSSCHHHH
T ss_pred hhH--HhccCeeeEEEeCCccc-----CCC-CC---------------------------CCccceEEeecccCCCHHHH
Confidence 221 11223444444321110 000 00 0111111110000
Q ss_pred -----------cCCeEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCC
Q 012467 268 -----------INGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLN 336 (463)
Q Consensus 268 -----------~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 336 (463)
.+......|||..... ...... . ...... | ... + ........+.++.|
T Consensus 153 ~~~~~~~~~~~~~~~~~~liNG~~~~~--c~~~~~-~-~~~~~~---------c-~~~--~-----~~~~~~~~~~v~~G 211 (552)
T 1aoz_A 153 EVGLSSKPIRWIGEPQTILLNGRGQFD--CSIAAK-Y-DSNLEP---------C-KLK--G-----SESCAPYIFHVSPK 211 (552)
T ss_dssp HHHTTSSSCCCCCSCSEEEETTBCCSS--SBTTGG-G-CTTSCB---------C-CCC--S-----CSTTSCCCEEECTT
T ss_pred HhhhhcccccCCCCCCeEEECCccccC--cccCcc-c-cccccc---------c-ccc--C-----CCCCCceEEEEcCC
Confidence 0001134677765210 000000 0 000000 0 000 0 00000014899999
Q ss_pred CEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcCC--cee
Q 012467 337 TTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADN--PGA 414 (463)
Q Consensus 337 ~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adn--pG~ 414 (463)
++++|.|.|.+... .+-||++||.|+|++. +|.+ ..|...|++.|.+|++..|.+++++ +|.
T Consensus 212 ~~~RlRliNa~~~~-----~~~~~i~gh~~~vi~~-DG~~----------~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~ 275 (552)
T 1aoz_A 212 KTYRIRIASTTALA-----ALNFAIGNHQLLVVEA-DGNY----------VQPFYTSDIDIYSGESYSVLITTDQNPSEN 275 (552)
T ss_dssp CEEEEEEEECCSSC-----EEEEEETTCCEEEEEE-TTEE----------EEEEEESCEEECTTCEEEEEEECCSCTTCC
T ss_pred CEEEEEEEcccccc-----eEEEEEcCcEEEEEEE-CCcc----------cCceEEeEEEEcCCcEEEEEEEcCCCCCCC
Confidence 99999999987652 7899999999999998 4432 1356789999999999999999943 899
Q ss_pred eeecccchH
Q 012467 415 WAFHCHIEP 423 (463)
Q Consensus 415 w~~HCHi~~ 423 (463)
|.++|+...
T Consensus 276 y~i~~~~~~ 284 (552)
T 1aoz_A 276 YWVSVGTRA 284 (552)
T ss_dssp EEEEEEEES
T ss_pred EEEEEEccc
Confidence 999999764
|
| >2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A | Back alignment and structure |
|---|
Probab=99.00 E-value=1.9e-09 Score=109.99 Aligned_cols=219 Identities=13% Similarity=0.112 Sum_probs=128.8
Q ss_pred eEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEec
Q 012467 116 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVR 195 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~ 195 (463)
|+|++++|+++++++.|... ....++.+|....- +.||.+ .-.|.|||+++..+++++ +.|+||-.....
T Consensus 50 P~i~~~~Gd~v~v~~~N~l~-~~tsiHwHG~~~~~-~~DG~~-------~~~i~PG~~~~Y~f~~~~-~~GT~wYH~H~~ 119 (451)
T 2uxt_A 50 PTIRVWKGDDVKLIYSNRLT-ENVSMTVAGLQVPG-PLMGGP-------ARMMSPNADWAPVLPIRQ-NAATLWYHANTP 119 (451)
T ss_dssp CEEEEETTCEEEEEEEECSS-SCBCEEEETCCCCG-GGSCSG-------GGCBCTTCEECCEEECCS-CSEEEEEEECCT
T ss_pred ceEEEeCCCEEEEEEEECCC-CCccEEECCccCCC-CCCCCC-------cCcCCCCCeEEEEEEcCC-CCcceEEecCCC
Confidence 58999999999999999984 44566666643221 379986 245789999999999986 579999988753
Q ss_pred CCCC-C-CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeeeeccCCeEE
Q 012467 196 GRKP-A-TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTK 273 (463)
Q Consensus 196 ~~~~-~-~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~ 273 (463)
.... + .....+.|..++.... .. ..|. .-.++++.+.+. .
T Consensus 120 ~~t~~q~~~Gl~G~liV~~~~~~---~~---~~p~------------------------~y~~~e~~l~l~--------D 161 (451)
T 2uxt_A 120 NRTAQQVYNGLAGMWLVEDEVSK---SL---PIPN------------------------HYGVDDFPVIIQ--------D 161 (451)
T ss_dssp TTHHHHHHTTCEEEEEEECHHHH---HS---SSCC------------------------CBTTTEEEEEEE--------E
T ss_pred CchhhhHhhcceEEEEEecCccc---cc---CCCc------------------------cCCCceEEEEEE--------e
Confidence 3210 1 1223444444321000 00 0000 001223333322 1
Q ss_pred EEEeccc-CCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCCCC
Q 012467 274 WAINNVS-LTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPN 352 (463)
Q Consensus 274 ~~iNg~~-~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~ 352 (463)
|..+... ..... . ...+ + .+. .+.+.+. ....+.++.| +++|.|.|.+...
T Consensus 162 ~~~~~~~~~~~~~-~-------~~~~-~----~~d----~~liNG~--------~~p~~~v~~g-~~RlRliNa~~~~-- 213 (451)
T 2uxt_A 162 KRLDNFGTPEYNE-P-------GSGG-F----VGD----TLLVNGV--------QSPYVEVSRG-WVRLRLLNASNSR-- 213 (451)
T ss_dssp EEECTTSCEECCC-C-------SSSC-C----CCS----EEEETTE--------ESCEEEECSS-EEEEEEEECCSSC--
T ss_pred eecCCCCceeccc-c-------cCCC-C----cCC----EEEECCc--------ccceEEecCC-EEEEEEEccCCce--
Confidence 2221100 00000 0 0000 0 000 0000000 0124889999 9999999988652
Q ss_pred CCCCCCeee-cCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcCCceeeeecccchH
Q 012467 353 LSEIHPWHL-HGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEP 423 (463)
Q Consensus 353 ~~~~HP~Hl-HG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adnpG~w~~HCHi~~ 423 (463)
.+.||| |||.|+|++. +|.+. ..|...|++.|.+|+...|.++++.+|.+.++++...
T Consensus 214 ---~~~~~i~dg~~~~vi~~-DG~~~---------~~P~~~~~l~l~pgeR~dvlv~~~~~~~~~l~~~~~~ 272 (451)
T 2uxt_A 214 ---RYQLQMNDGRPLHVISG-DQGFL---------PAPVSVKQLSLAPGERREILVDMSNGDEVSITCGEAA 272 (451)
T ss_dssp ---CEEEEETTSCCEEEEEC-SSSEE---------EEEEEESSEEECTTCEEEEEEECTTCCCEEEEC----
T ss_pred ---eEEEEECCCCeEEEEEe-CCCcc---------CCceEeceEEECceeEEEEEEEeCCCCEEEEEecCcc
Confidence 799999 9999999997 45431 2356789999999999999999998899999988654
|
| >3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=9.8e-09 Score=105.61 Aligned_cols=224 Identities=11% Similarity=0.073 Sum_probs=131.2
Q ss_pred eEEEecCCCeEEEEEEecCcc----eEEEEEEeCceeEE-EEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEE
Q 012467 116 QILHVQPNKTYRLRIASTTAL----ASLNLAVKNHKMVV-VEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWI 190 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~----~~~~~~i~~h~~~v-ia~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~i 190 (463)
|+|+++.|+++++++.|.-.. ....++.+|-.+.- -..||.+-. ..-.|.||+++...+++++ ..|+||-
T Consensus 34 P~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~v----tq~pI~PG~s~tY~f~~~~-~~GT~wY 108 (499)
T 3pxl_A 34 PLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFI----NQCPISPGHSFLYDFQVPD-QAGTFWY 108 (499)
T ss_dssp CCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTT----TBCCBCTTCEEEEEEECSS-CCEEEEE
T ss_pred CeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCcc----ccCCCCCCCeEEEEEEcCC-CCceeee
Confidence 589999999999999998764 34556666654321 357887531 1236899999999999954 4799999
Q ss_pred EEEecCCCCCCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeeeeccCC
Q 012467 191 SAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTING 270 (463)
Q Consensus 191 r~~~~~~~~~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~~ 270 (463)
....... ......+.|...+... +.+.....++.. ....+......... ... ... ..
T Consensus 109 HsH~~~q--~~~GL~G~lIV~~~~~------~~~~~~~~d~~~----~~l~l~Dw~~~~~~-~~~--------~~p--~~ 165 (499)
T 3pxl_A 109 HSHLSTQ--YCDGLRGPFVVYDPND------PHASRYDVDNDD----TVITLADWYHTAAK-LGP--------RFP--GG 165 (499)
T ss_dssp EECSTTG--GGGTCEEEEEEECTTC------TTGGGCSBCSGG----GEEEEEEECSSCTT-TSC--------SSC--SS
T ss_pred eccchhH--HhccceeEEEEcCCcc------cccccCCCCCce----EEEEEEcccCCccc-ccc--------CCC--CC
Confidence 8875321 1122334443331100 000000000000 00000000000000 000 000 00
Q ss_pred eEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCC
Q 012467 271 FTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIR 350 (463)
Q Consensus 271 ~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~ 350 (463)
.....|||....... .......+.++.|++++|.|.|.+..
T Consensus 166 ~d~~liNG~~~~~~~--------------------------------------~~~~~~~~~v~~G~~~RlRliNa~~~- 206 (499)
T 3pxl_A 166 ADATLINGKGRAPSD--------------------------------------SVAELSVIKVTKGKRYRFRLVSLSCN- 206 (499)
T ss_dssp CSEEEETTBCCCTTC--------------------------------------TTCCCCEEEECTTCEEEEEEEECCSS-
T ss_pred CcEEEECCCCcCCCC--------------------------------------CCCCcceEEEcCCCEEEEEEEecCCC-
Confidence 112455554211000 00011258999999999999998765
Q ss_pred CCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcCCc-eeeeecccc
Q 012467 351 PNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNP-GAWAFHCHI 421 (463)
Q Consensus 351 ~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adnp-G~w~~HCHi 421 (463)
..+.||++||.|+|++. +|.+ ..|...|++.|.+|++..|.++++.+ |.|.+.|..
T Consensus 207 ----~~~~~~i~gh~~~via~-DG~~----------~~P~~~~~l~i~pGqR~dvlv~~~~~~g~y~i~a~~ 263 (499)
T 3pxl_A 207 ----PNHTFSIDGHNLTIIEV-DSVN----------SQPLEVDSIQIFAAQRYSFVLDANQAVDNYWIRANP 263 (499)
T ss_dssp ----CCEEEEETTBCEEEEEE-TTEE----------EEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEE
T ss_pred ----eeEEEEECCCeEEEEEE-CCcc----------cCceEeeeEEECCCcEEEEEEECCCCCceEEEEEec
Confidence 27999999999999998 4433 23567899999999999999999874 888888764
|
| >3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* | Back alignment and structure |
|---|
Probab=98.94 E-value=1.1e-08 Score=105.35 Aligned_cols=226 Identities=11% Similarity=0.073 Sum_probs=131.1
Q ss_pred eEEEecCCCeEEEEEEecCcc----eEEEEEEeCceeEE-EEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEE
Q 012467 116 QILHVQPNKTYRLRIASTTAL----ASLNLAVKNHKMVV-VEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWI 190 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~----~~~~~~i~~h~~~v-ia~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~i 190 (463)
|+|+++.|+++++++.|.-.. ....++.+|-.+.- -..||.+- +..-.|.||+.+...+++++ ..|+||-
T Consensus 35 P~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~----vtq~pI~PG~sftY~f~~~~-~~GT~wY 109 (495)
T 3t6v_A 35 PVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAF----ITQCPIIVGNSFSYNFNVPG-MAGTYWY 109 (495)
T ss_dssp CEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEECTT-CCEEEEE
T ss_pred CeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCc----cccCCCCCCCeEEEEEEeCC-CCceeee
Confidence 589999999999999998764 24556666654321 25788753 12235899999999999955 4799999
Q ss_pred EEEecCCCCCCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeeeeccCC
Q 012467 191 SAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTING 270 (463)
Q Consensus 191 r~~~~~~~~~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~~ 270 (463)
....... ......+.|...+... +.+.....++.. ....+..... ..... + ..... ..
T Consensus 110 HsH~~~q--~~~GL~G~lIV~~~~~------~~~~~~~~d~~e----~~l~l~Dw~~--~~~~~----~--~~~~p--~~ 167 (495)
T 3t6v_A 110 HSHLTTQ--YCDGLRGPFVVYDPND------PDANLYDVDDDT----TIITLADWYH--VLAKE----M--GAGGA--IT 167 (495)
T ss_dssp EECSTTG--GGGTCEEEEEEECTTC------TTGGGCSBCSGG----GEEEEEEECS--SCGGG----S--CSSSC--CC
T ss_pred eccchhH--HhcCceEEEEEcCccc------cccccCCCCCce----eEEEEecccC--Cchhh----h--ccCCC--CC
Confidence 8875321 1122334443331100 000000000000 0000000000 00000 0 00000 00
Q ss_pred eEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCC
Q 012467 271 FTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIR 350 (463)
Q Consensus 271 ~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~ 350 (463)
.....|||...... . | .......+.++.|++++|.|.|.+..
T Consensus 168 ~d~~liNG~g~~~~-~-------------------~-----------------~~~~~~~~~v~~G~~~RlRliN~~~~- 209 (495)
T 3t6v_A 168 ADSTLIDGLGRTHV-N-------------------V-----------------AAVPLSVITVEVGKRYRMRLVSISCD- 209 (495)
T ss_dssp CSEEEETTBCCBSS-S-------------------C-----------------CCCCCCEEEECTTCEEEEEEEECCSS-
T ss_pred CcEEEECCcCcCCC-C-------------------c-----------------ccCCceEEEEcCCCEEEEEEEecCCC-
Confidence 11245555421100 0 0 00011258999999999999998764
Q ss_pred CCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcCCc-eeeeecccc
Q 012467 351 PNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNP-GAWAFHCHI 421 (463)
Q Consensus 351 ~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adnp-G~w~~HCHi 421 (463)
..+.||++||.|+|++. +|.+ ..|...|++.|.+|+...|-++++.+ |.|.++|..
T Consensus 210 ----~~~~~~i~gh~~~via~-DG~~----------~~P~~~~~l~i~pGqR~dvlv~~~~~~g~y~i~a~~ 266 (495)
T 3t6v_A 210 ----PNYDFSIDGHDMTIIET-DGVD----------SQELTVDEIQIFAAQRYSFVLNANQPVGNYWIRANP 266 (495)
T ss_dssp ----CCEEEEETTCCEEEEEE-TTEE----------EEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEE
T ss_pred ----eeEEEEECCCeEEEEEe-CCcc----------cCCEEeeeEEEcCceEEEEEEECCCCCceEEEEEec
Confidence 27999999999999998 4433 23567899999999999999999875 898898864
|
| >1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* | Back alignment and structure |
|---|
Probab=98.92 E-value=7.5e-09 Score=107.02 Aligned_cols=224 Identities=11% Similarity=0.109 Sum_probs=132.2
Q ss_pred eEEEecCCCeEEEEEEecCcc----eEEEEEEeCceeE-EEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEE
Q 012467 116 QILHVQPNKTYRLRIASTTAL----ASLNLAVKNHKMV-VVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWI 190 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~----~~~~~~i~~h~~~-via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~i 190 (463)
|+|++++|+++++++.|.-.. ....++.+|-... --..||.+-. ..-.|.||++++..+++.+ ..|+||-
T Consensus 34 P~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~v----tq~~I~PG~~~~Y~f~~~~-~~GT~wY 108 (503)
T 1hfu_A 34 PLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGV----NQCPISPGHAFLYKFTPAG-HAGTFWY 108 (503)
T ss_dssp CEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTT----TBCCBCTTCEEEEEECCTT-CCEEEEE
T ss_pred CcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCccc----ccCCcCCCCeEEEEEEeCC-CCccEEE
Confidence 489999999999999998862 4556666664331 1247887632 2234789999999999644 4799999
Q ss_pred EEEecCCCCCCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeeeeccCC
Q 012467 191 SAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTING 270 (463)
Q Consensus 191 r~~~~~~~~~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~~ 270 (463)
...... .......+.|.+++.. . +.+. .+ +.. ..+....+....- ....... . + . .
T Consensus 109 H~H~~~--q~~~Gl~G~liV~~~~-~-----~~~~--~~-~~d-~~e~~l~l~Dw~~--~~~~~~~-~--~----~---~ 164 (503)
T 1hfu_A 109 HSHFGT--QYCDGLRGPMVIYDDN-D-----PHAA--LY-DED-DENTIITLADWYH--IPAPSIQ-G--A----A---Q 164 (503)
T ss_dssp EECSTT--GGGGTCEEEEEEECTT-C-----TTGG--GC-SBC-STTSEEEEEEECS--SCGGGCC-------------C
T ss_pred Eecchh--hhhCcceeeEEEcCCC-C-----Cccc--CC-CCC-CceEEEEEccccc--CChHHhc-C--C----C---C
Confidence 987532 1112334444443211 0 0000 00 000 0000000000000 0000000 0 0 0 0
Q ss_pred eEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCC
Q 012467 271 FTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIR 350 (463)
Q Consensus 271 ~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~ 350 (463)
.....|||.....-. + ......+.++.|++++|.|.|.+...
T Consensus 165 ~d~~liNG~~~~~~~--------------------~------------------~~~~~~~~v~~g~~~RlRliN~~~~~ 206 (503)
T 1hfu_A 165 PDATLINGKGRYVGG--------------------P------------------AAELSIVNVEQGKKYRMRLISLSCDP 206 (503)
T ss_dssp CSEEEETTBCCBTTC--------------------C------------------CCCCCEEEECTTCEEEEEEEECCSSC
T ss_pred CCEEEECcccccCCC--------------------C------------------CCcceEEEEcCCCEEEEEEEecCCcc
Confidence 113456665421000 0 00012589999999999999988652
Q ss_pred CCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcCC-ceeeeecccch
Q 012467 351 PNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADN-PGAWAFHCHIE 422 (463)
Q Consensus 351 ~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adn-pG~w~~HCHi~ 422 (463)
.|.||++||.|.|++. +|.+ ..|...|++.|.+|+...|.++++. +|.|.++++..
T Consensus 207 -----~~~~~i~gh~~~vi~~-DG~~----------~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~ 263 (503)
T 1hfu_A 207 -----NWQFSIDGHELTIIEV-DGEL----------TEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPN 263 (503)
T ss_dssp -----CEEEEETTCCEEEEEE-TTEE----------EEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEES
T ss_pred -----cEEEEEcCceEEEEec-cCcc----------ccccccCeEEEcccceEEEEEEcCCCccceeeeeccc
Confidence 7999999999999997 3432 1356789999999999999999987 79898998754
|
| >1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 | Back alignment and structure |
|---|
Probab=98.91 E-value=1.4e-08 Score=105.43 Aligned_cols=230 Identities=11% Similarity=0.091 Sum_probs=132.5
Q ss_pred eEEEecCCCeEEEEEEecCcc----eEEEEEEeCceeE-EEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEE
Q 012467 116 QILHVQPNKTYRLRIASTTAL----ASLNLAVKNHKMV-VVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWI 190 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~----~~~~~~i~~h~~~-via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~i 190 (463)
|+|++++|+++++++.|.-.. ....++.+|-... --..||.+-. ..-.|.||++++..++..+ ..|+||-
T Consensus 55 P~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~v----tq~~I~PG~s~~Y~f~~~~-~~GT~wY 129 (521)
T 1v10_A 55 PLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPAFV----NQCPIIPNESFVYDFVVPG-QAGTYWY 129 (521)
T ss_dssp CCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGSCCBTT----TBCCBCTTEEEEEEEECTT-CCEEEEE
T ss_pred CcEEEeCCCEEEEEEEECCCCccCCCCceEecCCeeccCCCccCCCcce----eeCCcCCCCeEEEEEecCC-CCccEEE
Confidence 589999999999999999862 5556666664431 1236887631 2234789999999999644 4799999
Q ss_pred EEEecCCCCCCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeeeeccCC
Q 012467 191 SAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTING 270 (463)
Q Consensus 191 r~~~~~~~~~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~~ 270 (463)
...... .......+.|.+++.. . +.+. .+ +.. ..+....+.+..- .. +..+....... ...
T Consensus 130 H~H~~~--q~~~Gl~G~liV~~~~-~-----~~~~--~~-~~d-~~e~~l~l~D~~~--~~----~~~~~~~~~~~-~~~ 190 (521)
T 1v10_A 130 HSHLST--QYCDGLRGAFVVYDPN-D-----PHLS--LY-DVD-DASTVITIADWYH--SL----STVLFPNPNKA-PPA 190 (521)
T ss_dssp EECSTT--GGGGTCEEEEEEECTT-C-----TTGG--GC-SBC-SGGGEEEEEEECS--SC----CC-------CC-CSC
T ss_pred EeccCC--chhcCceEEEEEcCCc-c-----cccc--cC-CCC-CceeEEEEccccc--CC----HHHHhhccCCC-CCC
Confidence 887532 1112334444443211 0 0000 00 000 0000000000000 00 00000000000 000
Q ss_pred eEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCC
Q 012467 271 FTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIR 350 (463)
Q Consensus 271 ~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~ 350 (463)
.....|||..+.... ........+.++.|++++|.|.|.+...
T Consensus 191 ~d~~liNG~~~~~~~-------------------------------------~~~~~~~~~~v~~G~~~RlRliNa~~~~ 233 (521)
T 1v10_A 191 PDTTLINGLGRNSAN-------------------------------------PSAGQLAVVSVQSGKRYRFRIVSTSCFP 233 (521)
T ss_dssp CSEEEETTBCCCSSC-------------------------------------GGGSCCCEEEECTTCEEEEEEEECCSSC
T ss_pred CCEEEECCcccCCCC-------------------------------------CCCCCceEEEECCCCEEEEEEEecCCcc
Confidence 113456655321000 0000012589999999999999988652
Q ss_pred CCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcCC-ceeeeecccch
Q 012467 351 PNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADN-PGAWAFHCHIE 422 (463)
Q Consensus 351 ~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adn-pG~w~~HCHi~ 422 (463)
.|.||++||.|.|++. +|.+ ..|...|++.|.+|+...|.++++. +|.|.++|+..
T Consensus 234 -----~~~~~i~gh~~~vi~~-DG~~----------~~p~~~~~l~l~pgqR~dvlv~~~~~~g~y~i~~~~~ 290 (521)
T 1v10_A 234 -----NYAFSIDGHRMTVIEV-DGVS----------HQPLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPS 290 (521)
T ss_dssp -----CEEEEETTCCEEEEEE-TTEE----------EEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEES
T ss_pred -----cEEEEECCCeEEEEec-CCcc----------ccceeeeeEEEcccceEEEEEEcCCCCCceeeeeccc
Confidence 7999999999999998 3432 1356789999999999999999987 69999999854
|
| >3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} | Back alignment and structure |
|---|
Probab=98.90 E-value=2.1e-08 Score=104.67 Aligned_cols=215 Identities=9% Similarity=0.007 Sum_probs=131.1
Q ss_pred eEEEecCCCeEEEEEEecCcceEEEEEEeCceeE-EEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEe
Q 012467 116 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMV-VVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 194 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~-via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~ 194 (463)
|+|+++.|+++++++.|.-......++.+|-... --..||.+-. ..-.|.||+.+...+++++ .|+||-....
T Consensus 98 P~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~v----Tq~pI~PG~sftY~f~~~q--~GT~WYHsH~ 171 (580)
T 3sqr_A 98 PAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGV----TQCPIAPGDTLTYKFQVTQ--YGTTWYHSHF 171 (580)
T ss_dssp CCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBTT----TBCCBCTTCEEEEEEECCC--CEEEEEEECS
T ss_pred ceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCcc----ccCCCCCCCeEEEEEECCC--CcceEEeecc
Confidence 5899999999999999987644455555554332 1367888632 2235899999999999976 6999998875
Q ss_pred cCCCCCCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEE-EEEeeeec------
Q 012467 195 RGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRL-TLLNTQNT------ 267 (463)
Q Consensus 195 ~~~~~~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~-~~~~~~~~------ 267 (463)
... ......+.|...+... ..+ |+++ .+.+....
T Consensus 172 ~~q--~~~GL~G~lIV~~p~~-----------~~y--------------------------D~d~~~l~l~Dw~~~~~~~ 212 (580)
T 3sqr_A 172 SLQ--YGDGLFGPLIINGPAT-----------ADY--------------------------DEDVGVIFLQDWAHESVFE 212 (580)
T ss_dssp TTG--GGGTCEEEEEEECCCS-----------SCC--------------------------SEEEEEEEEEEECSSCHHH
T ss_pred ccc--ccCcCEEEEEeeCccc-----------CCC--------------------------CccceEEEEEEEecCCHHH
Confidence 211 1122334443332100 000 0100 00000000
Q ss_pred ---------cCCeEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCE
Q 012467 268 ---------INGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTT 338 (463)
Q Consensus 268 ---------~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 338 (463)
........|||.....-. + .. + .+.........+.++.|++
T Consensus 213 ~~~~~~~~~~~~~d~~liNG~~~~~c~-~---------------~~-------~-------~~~~~~~~~~~~~v~~G~~ 262 (580)
T 3sqr_A 213 IWDTARLGAPPALENTLMNGTNTFDCS-A---------------ST-------D-------PNCVGGGKKFELTFVEGTK 262 (580)
T ss_dssp HHHHHTTSCCCCBSEEEETTBCCCCCT-T---------------CC-------C-------TTBCCCCCCCEEECCTTCE
T ss_pred HHHHHhccCCCCCceEEECCcccCCCc-c---------------cc-------c-------cccccCCCceeEEEcCCCE
Confidence 000112456665331100 0 00 0 0000001123689999999
Q ss_pred EEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcCC-ceeeee
Q 012467 339 VDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADN-PGAWAF 417 (463)
Q Consensus 339 v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adn-pG~w~~ 417 (463)
++|+|+|.+... .+.||++||.|.|++. +|.+ ..|...|++.|.+|++..|.++++. +|.|.+
T Consensus 263 yRlRlINa~~~~-----~~~~~i~gh~~~VIa~-DG~~----------v~P~~~~~l~i~pGqRydVlv~a~~~~g~Y~i 326 (580)
T 3sqr_A 263 YRLRLINVGIDS-----HFEFAIDNHTLTVIAN-DLVP----------IVPYTTDTLLIGIGQRYDVIVEANAAADNYWI 326 (580)
T ss_dssp EEEEEEECCSSC-----CEEEEETTCCEEEEEE-TTEE----------EEEEEESSEEECTTCEEEEEEECCSCSSEEEE
T ss_pred EEEEEEeccCCc-----eeeEEeCCceEEEEEe-CCcc----------CCceEeeEEEEccceEEEEEEEeCCCCCeEEE
Confidence 999999988652 7899999999999998 4433 2356789999999999999999986 677777
Q ss_pred cccc
Q 012467 418 HCHI 421 (463)
Q Consensus 418 HCHi 421 (463)
....
T Consensus 327 ~a~~ 330 (580)
T 3sqr_A 327 RGNW 330 (580)
T ss_dssp ECCC
T ss_pred EEec
Confidence 6554
|
| >2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* | Back alignment and structure |
|---|
Probab=98.89 E-value=2.4e-08 Score=104.49 Aligned_cols=207 Identities=10% Similarity=-0.002 Sum_probs=128.9
Q ss_pred eEEEecCCCeEEEEEEecCcceEEEEEEeCceeE-EEEeCCcccceeeEeeEEecC-CceEEEEEecCCCCCCceEEEEE
Q 012467 116 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMV-VVEADGNYVQPFEVDDMDIYS-GESYSVLLTTNQDPSYNYWISAG 193 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~-via~DG~~v~P~~~~~l~i~~-GeR~dvlV~~~~~~~g~y~ir~~ 193 (463)
|+|++++|+++++++.|........++.+|-... --..||.+-. ..-.|.| |++++..+++++ .|+||-...
T Consensus 67 P~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~~----tq~~I~P~G~~~~Y~f~~~q--~GT~wYH~H 140 (559)
T 2q9o_A 67 PNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGANGV----TECPIPPKGGQRTYRWRARQ--YGTSWYHSH 140 (559)
T ss_dssp CCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCCBTT----TBCCBCTTTEEEEEEEECCS--CEEEEEEEC
T ss_pred CcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCCCcc----ccCccCCCCCeEEEEEECCC--CEEEEEEEc
Confidence 5899999999999999988555556666664331 1246888632 2234789 999999999886 699999887
Q ss_pred ecCCCCCCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEE-EEEeeeecc----
Q 012467 194 VRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRL-TLLNTQNTI---- 268 (463)
Q Consensus 194 ~~~~~~~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~-~~~~~~~~~---- 268 (463)
... .......+.|.+++... ..+ |+.+ .+.+.....
T Consensus 141 ~~~--q~~~Gl~G~liV~~~~~-----------~~~--------------------------d~d~~~l~l~Dw~~~~~~ 181 (559)
T 2q9o_A 141 FSA--QYGNGVVGTIQINGPAS-----------LPY--------------------------DIDLGVFPITDYYYRAAD 181 (559)
T ss_dssp STT--GGGGTCEEEEEEECCCS-----------SCC--------------------------SEEEEEEEEEEECSSCHH
T ss_pred ccc--hhcCCceEEEEecCCCc-----------CCC--------------------------cccceEEEEeccccCCHH
Confidence 521 11122344444432100 000 1111 111100000
Q ss_pred -----------CCeEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCC
Q 012467 269 -----------NGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNT 337 (463)
Q Consensus 269 -----------~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 337 (463)
.......|||..... .. .. .....+.++.|+
T Consensus 182 ~~~~~~~~~~~~~~d~~liNG~~~~~-~~---------~~----------------------------g~~~~~~v~~g~ 223 (559)
T 2q9o_A 182 DLVHFTQNNAPPFSDNVLINGTAVNP-NT---------GE----------------------------GQYANVTLTPGK 223 (559)
T ss_dssp HHHHHHTTSCCCCBSEEEETTBCBCT-TT---------CC----------------------------BCCCEEEECTTC
T ss_pred HHhhhhhcCCCCccceeEECCccccC-cC---------CC----------------------------CCceEEEEcCCC
Confidence 000124455554210 00 00 001248899999
Q ss_pred EEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcCC-ceeee
Q 012467 338 TVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADN-PGAWA 416 (463)
Q Consensus 338 ~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adn-pG~w~ 416 (463)
+++|.|.|.+... .|.||++||.|.|++.. |.+ ..|...|++.|.+|+.+.|.++++. +|.+.
T Consensus 224 ~~RlRliNa~~~~-----~~~~~i~gh~~~vi~~D-G~~----------~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~ 287 (559)
T 2q9o_A 224 RHRLRILNTSTEN-----HFQVSLVNHTMTVIAAD-MVP----------VNAMTVDSLFLAVGQRYDVVIDASRAPDNYW 287 (559)
T ss_dssp EEEEEEEECCSSC-----CEEEEETTBCEEEEEET-TEE----------EEEEEESCEEECTTCEEEEEEECCSCSSEEE
T ss_pred EEEEEEEecCCCc-----eEEEEECCCceEEEecC-Ccc----------cCceEeCeEEEccEEEEEEEEECCCCCCcEE
Confidence 9999999988652 78999999999999983 432 1356789999999999999999986 67766
Q ss_pred ecccc
Q 012467 417 FHCHI 421 (463)
Q Consensus 417 ~HCHi 421 (463)
+....
T Consensus 288 i~a~~ 292 (559)
T 2q9o_A 288 FNVTF 292 (559)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 65554
|
| >2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A | Back alignment and structure |
|---|
Probab=98.86 E-value=4.8e-09 Score=84.74 Aligned_cols=84 Identities=19% Similarity=0.193 Sum_probs=63.0
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.+.++.|++|+|+ |.+.. .|.||+|+..+.. . .|. +... ...|++.+.+|+...+.|.+
T Consensus 21 ~i~v~~Gd~V~~~--n~~~~------~H~~~~~~~~~~~-~--~g~----~~~~------~~~~~~~~~pG~~~~~~f~~ 79 (106)
T 2gim_A 21 KLTIKPGDTVEFL--NNKVP------PHNVVFDAALNPA-K--SAD----LAKS------LSHKQLLMSPGQSTSTTFPA 79 (106)
T ss_dssp EEEECTTCEEEEE--ECSSS------CCCBEECSSSSTT-C--CHH----HHHH------HCBCSCCCSTTCEEEEECCT
T ss_pred EEEECCCCEEEEE--ECCCC------CceEEEeCCCCcc-c--ccc----cchh------ccccceeeCCCCEEEEEEec
Confidence 4889999999886 77655 8999999865421 0 010 0000 11467788999999999988
Q ss_pred -CCceeeeecccchHhHHccceeeeecc
Q 012467 410 -DNPGAWAFHCHIEPHFHIGMGVVLALG 436 (463)
Q Consensus 410 -dnpG~w~~HCHi~~H~~~GM~~~~~~~ 436 (463)
+.||.|.|||| .|.++||.+.|.+.
T Consensus 80 ~~~~G~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 80 DAPAGEYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp TCCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CCCCceEEEEeC--ChhhcCcEEEEEEc
Confidence 78999999999 89999999988653
|
| >1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A | Back alignment and structure |
|---|
Probab=98.76 E-value=1.4e-08 Score=86.45 Aligned_cols=95 Identities=22% Similarity=0.287 Sum_probs=69.3
Q ss_pred EEccCCCEEEEEEEe--CCCCCCCCCCCCCeeecCC--ceEEEe-e----c-CCCCCccccccCCCCCCCccceEEeCCC
Q 012467 331 YMLGLNTTVDVILQN--ANAIRPNLSEIHPWHLHGH--DFWVLG-R----G-EGKFTKEDEKKFNLKNPPLKNTAVIFPY 400 (463)
Q Consensus 331 ~~~~~g~~v~~vl~N--~~~~~~~~~~~HP~HlHG~--~f~vl~-~----g-~g~~~~~~~~~~n~~~p~~rDTv~v~~~ 400 (463)
++++.|++|+|++.| .+.+ .|.||++.. .+.-+. . + ...|.+. .-....+++|..|.+|
T Consensus 35 i~v~~G~tV~~~~~N~~~~~~------~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~t~~l~pG 103 (140)
T 1qhq_A 35 LSLPANTVVRLDFVNQNNLGV------QHNWVLVNGGDDVAAAVNTAAQNNADALFVPP-----PDTPNALAWTAMLNAG 103 (140)
T ss_dssp EEEETTCEEEEEEEECCSSCC------CBCCEEESSSHHHHHHHHHHHHTCGGGTTCCC-----TTCTTEEEECCCBCTT
T ss_pred EEECCCCEEEEEEECCCCCCC------ceeEEEeccCcchhhhhhhhhhhcccccccCc-----cccccccccceeeCCC
Confidence 899999999999999 5555 899999853 121100 0 0 0001000 0001246789999999
Q ss_pred cEEEEEEEcCCceeeeecccchHhHHccceeeeecc
Q 012467 401 GWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALG 436 (463)
Q Consensus 401 g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~ 436 (463)
....+.|.++.||.|.|||++..|...||.+.|.+.
T Consensus 104 ~~~~~~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 104 ESGSVTFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp EEEEEEEECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred ceeEEEEEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 999999999999999999999999999999988764
|
| >1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.76 E-value=8e-08 Score=99.88 Aligned_cols=218 Identities=13% Similarity=0.148 Sum_probs=128.1
Q ss_pred eEEEecCCCeEEEEEEecCcceEEEEEEeCceeEE-EEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEe
Q 012467 116 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVV-VEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 194 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~v-ia~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~ 194 (463)
|+|++++|+++++++.|.-......++.+|-.+.. -..||.+-. ..-.|.||++++..+++++ ..|+||-....
T Consensus 34 P~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~v----tq~pI~PG~~~~Y~f~~~~-~~GT~wYH~H~ 108 (534)
T 1zpu_A 34 PDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFL----TQCPIAPGSTMLYNFTVDY-NVGTYWYHSHT 108 (534)
T ss_dssp CCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTT----TBCCBCTTCEEEEEEECSS-CCEEEEEECCS
T ss_pred ccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCcc----ccCCcCCCCeEEEEEEeCc-cceeEEEEEcC
Confidence 58999999999999999886455566666644321 257887631 1234889999999999985 47999998765
Q ss_pred cCCCCCCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeeeeccCCeEEE
Q 012467 195 RGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKW 274 (463)
Q Consensus 195 ~~~~~~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~ 274 (463)
... ......+.|..++.. . |. ..|+++.+.+.. |
T Consensus 109 ~~q--~~~Gl~G~liV~~~~------~-----p~-------------------------~~d~e~~l~l~D--------w 142 (534)
T 1zpu_A 109 DGQ--YEDGMKGLFIIKDDS------F-----PY-------------------------DYDEELSLSLSE--------W 142 (534)
T ss_dssp SSG--GGGTCEEEEEEECTT------C-----CS-------------------------CCSEEEEEEEEE--------E
T ss_pred ccc--ccCcceeeEEeCCCC------C-----CC-------------------------CCcceEEEEeec--------c
Confidence 321 112233444443210 0 00 112333333221 2
Q ss_pred EEecccCCCCCCCCccccc--cCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCCCC
Q 012467 275 AINNVSLTLPPTPYLGSIK--YGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPN 352 (463)
Q Consensus 275 ~iNg~~~~~p~~p~l~~~~--~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~ 352 (463)
..+... .++.... +...+ ....+. .+ ..+.. ....+.++.|++++|.|.|.+...
T Consensus 143 ~~~~~~------~~~~~~~~~~~~~g---~~~~~d----~~-liNG~-------~~~~~~v~~g~~~RlRliNa~~~~-- 199 (534)
T 1zpu_A 143 YHDLVT------DLTKSFMSVYNPTG---AEPIPQ----NL-IVNNT-------MNLTWEVQPDTTYLLRIVNVGGFV-- 199 (534)
T ss_dssp CSSCHH------HHHHHHSSTTCTTC---CCCCCS----EE-EETTB-------SSCEEECCSSCEEEEEEEECCSSC--
T ss_pred ccCCHH------HHHHHHhccccCCC---CCCCCc----eE-EECCC-------CceEEEEECCCEEEEEEEeccCCc--
Confidence 111000 0000000 00000 000000 00 00000 012589999999999999988652
Q ss_pred CCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcCC--ceeeeecccc
Q 012467 353 LSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADN--PGAWAFHCHI 421 (463)
Q Consensus 353 ~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adn--pG~w~~HCHi 421 (463)
.+-||++||.|.|++. +|.+. .|...|++.|.+|+...|.+++++ .|.+.++...
T Consensus 200 ---~~~~~i~gh~~~vi~~-DG~~~----------~P~~~~~l~l~~gqR~dvlv~~~~~~~~~y~i~~~~ 256 (534)
T 1zpu_A 200 ---SQYFWIEDHEMTVVEI-DGITT----------EKNVTDMLYITVAQRYTVLVHTKNDTDKNFAIMQKF 256 (534)
T ss_dssp ---CEEEEETTBCEEEEEE-TTEEE----------EEEEESCEEECTTCEEEEEEECCSCSSCCEEEEEEE
T ss_pred ---eEEEEEcCCeeEEEec-cCcCc----------cccEeceEEECccceEEEEEEcCCCCCCcEEEEEec
Confidence 7899999999999998 44331 356679999999999999999975 3666666654
|
| >3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=98.64 E-value=3.4e-07 Score=93.56 Aligned_cols=197 Identities=15% Similarity=0.151 Sum_probs=126.1
Q ss_pred eEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEec
Q 012467 116 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVR 195 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~ 195 (463)
|+|+++.|+++++|+.|.-. ....++.+|-... -+.||.+ .-.|.||++++..+++++...|+||-.....
T Consensus 82 PtIr~~~Gd~v~v~v~N~l~-~~tsiHwHGl~~~-~~~DG~p-------q~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~ 152 (481)
T 3zx1_A 82 PKIEVFEGDKLEILVKNKLK-EATTIHWHGVPVP-PDQDGSP-------HDPILAGEERIYRFEIPQDSAGTYWYHPHPH 152 (481)
T ss_dssp CBEEEETTCEEEEEEEECSS-SCBCCEEETCCCC-GGGSCCT-------TSCBCTTCEEEEEEECCTTCCEEEEEECCCT
T ss_pred ceEEEECCcEEEEEEEeCCC-CCeeEEecCcccC-CccCCCc-------cCcCCCCCeEEEEEeCCCCCCceEEEeecCC
Confidence 58999999999999999864 4456666665432 2578875 2368999999999999875578999987643
Q ss_pred CCCC-C-CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeeeecc--CC-
Q 012467 196 GRKP-A-TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTI--NG- 270 (463)
Q Consensus 196 ~~~~-~-~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~--~~- 270 (463)
.... + .....+.|.+++.... . ... ++.+ +.+..... ++
T Consensus 153 ~~t~~q~~~GL~G~lIV~~~~~~---~---~~~-----------------------------~~~~-l~l~D~~~~~~g~ 196 (481)
T 3zx1_A 153 YTASKQVFMGLAGAFVIKAKKDA---L---SHL-----------------------------KEKD-LMISDLRLDENAQ 196 (481)
T ss_dssp TTHHHHHHTTCCEEEEEECSSCT---T---TTS-----------------------------EEEE-EEEEEECCBTTSC
T ss_pred CcchhhhhccceEEEEEcCcccc---c---cCC-----------------------------Ccee-EEEEEEeccCCCc
Confidence 2111 1 1122233333321100 0 000 0011 11100000 00
Q ss_pred --------------eEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCC
Q 012467 271 --------------FTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLN 336 (463)
Q Consensus 271 --------------~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 336 (463)
.....|||..+ ..+.++.|
T Consensus 197 ~~~~~~~~~~~g~~gd~~lvNG~~~-----------------------------------------------p~l~v~~g 229 (481)
T 3zx1_A 197 IPNNNLNDWLNGREGEFVLINGQFK-----------------------------------------------PKIKLATN 229 (481)
T ss_dssp CCCCCHHHHHHCCCCSEEEETTEES-----------------------------------------------CEEEEETT
T ss_pred cccccchhhccCCcCCEEEECCccC-----------------------------------------------ceEEecCC
Confidence 01123333321 14788999
Q ss_pred CEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcCCceeee
Q 012467 337 TTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWA 416 (463)
Q Consensus 337 ~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adnpG~w~ 416 (463)
+ +|.|.|.+... .+.||++||.|.||+...|.. ..|...|++.|.+|+.+.|-++++.+|.|.
T Consensus 230 ~--RlRliNa~~~~-----~~~l~i~g~~~~vIa~DGg~~----------~~P~~~~~l~l~pgeR~dvlv~~~~~~~~~ 292 (481)
T 3zx1_A 230 E--RIRIYNATAAR-----YLNLRIQGAKFILVGTDGGLI----------EKTIYKEELFLSPASRVEVLIDAPKDGNFK 292 (481)
T ss_dssp E--EEEEEECCSSC-----CEEEEETTCEEEEEEETTEEE----------EEEEEESSEEECTTCEEEEEEECSSCEEEE
T ss_pred C--EEEEEecCCCe-----EEEEEECCCceEEEEcCCCcc----------CCceEeCeEEECCccEEEEEEEcCCCcEEE
Confidence 9 99999987652 799999999999999843332 235667999999999999999999999999
Q ss_pred ecccc
Q 012467 417 FHCHI 421 (463)
Q Consensus 417 ~HCHi 421 (463)
+-++.
T Consensus 293 l~~~~ 297 (481)
T 3zx1_A 293 LESAY 297 (481)
T ss_dssp EEECC
T ss_pred EEEec
Confidence 88764
|
| >1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A | Back alignment and structure |
|---|
Probab=98.63 E-value=2.7e-08 Score=79.07 Aligned_cols=78 Identities=15% Similarity=0.195 Sum_probs=59.3
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.+.++.|++|.|+ |.+.. .|.||+|+..+- +. +... ...|++.+.+|+...+.|
T Consensus 20 ~i~v~~G~~V~~~--n~~~~------~H~~~~~~~~~p--g~--------~~~~------~~~~~~~~~pG~~~~~tf-- 73 (98)
T 1pcs_A 20 TVTIKAGEEVKWV--NNKLS------PHNIVFDADGVP--AD--------TAAK------LSHKGLLFAAGESFTSTF-- 73 (98)
T ss_dssp EEEECTTCEEEEE--ECSSC------CEEEEECCSSSC--HH--------HHHH------HCEEEEECSTTCEEEEEC--
T ss_pred EEEECCCCEEEEE--ECCCC------CcEEEEeCCCCC--cc--------cccc------ccccccccCCCCEEEEEc--
Confidence 4899999999987 66655 899999875421 10 0000 115788999999988877
Q ss_pred CCceeeeecccchHhHHccceeeeec
Q 012467 410 DNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 410 dnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
+.||.|.|||+ .|..+||.+.|.+
T Consensus 74 ~~~G~y~~~C~--~H~~~gM~G~i~V 97 (98)
T 1pcs_A 74 TEPGTYTYYCE--PHRGAGMVGKVVV 97 (98)
T ss_dssp CSCEEEEEECG--GGTTTTCEEEEEE
T ss_pred CCCeEEEEEcC--CccccCCeEEEEE
Confidence 78999999999 7999999998865
|
| >2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=98.59 E-value=1.1e-07 Score=75.35 Aligned_cols=79 Identities=14% Similarity=0.213 Sum_probs=59.9
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.+.++.|++|+| .|.+.. .|.||+|+..+- ..++. ...++|++.+.+|+...++|
T Consensus 19 ~i~v~~G~~V~~--~n~~~~------~H~~~~~~~~~p------~~~~~---------~~~~~~~~~~~pG~~~~~tf-- 73 (98)
T 2plt_A 19 TLTIKSGETVNF--VNNAGF------PHNIVFDEDAIP------SGVNA---------DAISRDDYLNAPGETYSVKL-- 73 (98)
T ss_dssp EEEECTTCEEEE--EECSSC------CEEEEECGGGSC------TTCCH---------HHHCEEEEECSTTCEEEEEC--
T ss_pred EEEECCCCEEEE--EECCCC------ceEEEEeCCCCC------Ccccc---------ccccccceecCCCCEEEEEe--
Confidence 488999999987 577666 899999975320 01110 00246889999999988876
Q ss_pred CCceeeeecccchHhHHccceeeeec
Q 012467 410 DNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 410 dnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
+.||.|.|||| .|.++||.+.|.+
T Consensus 74 ~~~G~y~y~C~--~H~~~gM~G~i~V 97 (98)
T 2plt_A 74 TAAGEYGYYCE--PHQGAGMVGKIIV 97 (98)
T ss_dssp CSCEEEEEECG--GGGGGTCEEEEEE
T ss_pred CCCeEEEEEcC--CccccCCeEEEEE
Confidence 58999999999 7999999998865
|
| >1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A | Back alignment and structure |
|---|
Probab=98.50 E-value=2.7e-07 Score=72.02 Aligned_cols=71 Identities=20% Similarity=0.303 Sum_probs=56.7
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.+.++.|+.|.|+ |.+.. .|.+|+|+.. . ...++..+.+|+...+.|
T Consensus 20 ~i~v~~Gd~V~~~--n~~~~------~H~v~~~~~~---------~--------------~~~~~~~~~~g~~~~~~f-- 66 (91)
T 1bxv_A 20 TIEIQAGDTVQWV--NNKLA------PHNVVVEGQP---------E--------------LSHKDLAFSPGETFEATF-- 66 (91)
T ss_dssp EEEECTTCEEEEE--ECSSC------CEEEEETTCG---------G--------------GCEEEEECSTTCEEEEEC--
T ss_pred EEEECCCCEEEEE--ECCCC------CcEEEEeCCC---------c--------------cCcccceeCCCCEEEEEe--
Confidence 4889999999886 66545 8999998721 0 124677889999887776
Q ss_pred CCceeeeecccchHhHHccceeeeec
Q 012467 410 DNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 410 dnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
+.||.|.|||+ .|...||.+.+.+
T Consensus 67 ~~~G~y~~~C~--~H~~~gM~g~i~V 90 (91)
T 1bxv_A 67 SEPGTYTYYCE--PHRGAGMVGKIVV 90 (91)
T ss_dssp CSCEEEEEECT--TTGGGTCEEEEEE
T ss_pred CCCEEEEEEeC--CCccCCCEEEEEE
Confidence 88999999999 8999999988764
|
| >3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} | Back alignment and structure |
|---|
Probab=98.47 E-value=2.5e-07 Score=94.08 Aligned_cols=198 Identities=12% Similarity=0.128 Sum_probs=122.8
Q ss_pred eEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEec
Q 012467 116 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVR 195 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~ 195 (463)
|+|++++|+++++++.|.-. ....++.+|-... -+.||.+- -.|.||+.++..+++++ ..|+||-.....
T Consensus 38 P~i~~~~Gd~v~v~~~N~l~-~~tsiHwHG~~~~-~~~DG~~~-------~~i~PG~~~~Y~f~~~~-~~GT~wYH~H~~ 107 (448)
T 3aw5_A 38 PTIILRRGQRVDMTLKNKLT-EPTIVHWHGFDVN-WHNDAHPS-------FAITPGESYNYSFDVVN-RAGTYLYHPHPH 107 (448)
T ss_dssp CEEEEETTCEEEEEEEECSS-SCBCEEEETCCCC-HHHHTCGG-------GCBCTTCEEEEEEECCS-CSEEEEEEECCT
T ss_pred ceEEEeCCCEEEEEEEECCC-CceeEEeCCccCC-CccCCCCC-------ccCCCCCEEEEEEEcCC-CCCceEeccCCC
Confidence 58999999999999999874 4456666665432 24688775 45789999999999986 479999988743
Q ss_pred CCCC-C-CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeeeeccC-C--
Q 012467 196 GRKP-A-TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTIN-G-- 270 (463)
Q Consensus 196 ~~~~-~-~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~-~-- 270 (463)
.... + .....+.|..++.... . ..| +. .+++.+.+.....+ +
T Consensus 108 ~~~~~q~~~Gl~G~liV~~~~~~------~-~l~-~d-------------------------~~e~~l~l~D~~~~~~~~ 154 (448)
T 3aw5_A 108 GLTAKQFYMGQLGLVIVEDSGSD------L-GFK-YG-------------------------VNDLPLVISDRRFIGGAP 154 (448)
T ss_dssp TTHHHHHHTTCCEEEEEECTTTT------T-TCC-BT-------------------------TTEEEEEEEEEEEETTEE
T ss_pred CchHHHHhccceEEEEEeCCccc------c-CCC-CC-------------------------CceEEEEEEeeccCCCcc
Confidence 2211 1 1122333333321100 0 000 00 02222222110000 0
Q ss_pred --------------eEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCC
Q 012467 271 --------------FTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLN 336 (463)
Q Consensus 271 --------------~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 336 (463)
.....|||..+ ..+.++.|
T Consensus 155 ~~~~~~~~~~~~~~~~~~liNG~~~-----------------------------------------------p~~~v~~g 187 (448)
T 3aw5_A 155 VYNPTPMEMIAGFLGNAVLVNGVKD-----------------------------------------------AVFKLSGG 187 (448)
T ss_dssp ECCCCHHHHHHCCCCSEEEETTEET-----------------------------------------------CEEEEEEE
T ss_pred cccccccccccCccccEEEECCccc-----------------------------------------------ceEEECCC
Confidence 01122222211 14889999
Q ss_pred CEEEEEEEeCCCCCCCCCCCCCeee--cC---CceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcCC
Q 012467 337 TTVDVILQNANAIRPNLSEIHPWHL--HG---HDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADN 411 (463)
Q Consensus 337 ~~v~~vl~N~~~~~~~~~~~HP~Hl--HG---~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adn 411 (463)
+++|.|.|.+... .+.||+ +| |.|+|++. +|.+- ..|...|++.|.+|+.+.|.++++
T Consensus 188 -~~RlRliNa~~~~-----~~~~~i~~~~~~~~~~~via~-DG~~~---------~~P~~~~~l~l~pgeR~dvlv~~~- 250 (448)
T 3aw5_A 188 -SYRLRLVNGSNAR-----LYMLSIVKKNGDVVPMRLIAV-DQGFL---------ARPIEVRALFLAPAERAEVVVELG- 250 (448)
T ss_dssp -EEEEEEEECSSSC-----CEEEEEEETTSCEECEEEEEE-TTEEE---------EEEEEESCEEECTTCEEEEEEEEC-
T ss_pred -eEEEEEEcCCCcc-----eEEEEEEcCCCCCccEEEEEe-CCCcc---------CCceEeceEEECCcceEEEEEECC-
Confidence 9999999988652 799999 99 99999998 44332 124567999999999999999987
Q ss_pred ceeeeeccc
Q 012467 412 PGAWAFHCH 420 (463)
Q Consensus 412 pG~w~~HCH 420 (463)
.|.|.+..+
T Consensus 251 ~~~y~l~~~ 259 (448)
T 3aw5_A 251 EGVYLLKNT 259 (448)
T ss_dssp SEEEEEEEC
T ss_pred CCceEEEcc
Confidence 466444444
|
| >1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A* | Back alignment and structure |
|---|
Probab=98.45 E-value=7.5e-08 Score=76.29 Aligned_cols=77 Identities=18% Similarity=0.272 Sum_probs=58.3
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.+.++.|++|+|+ |.+.. .|.+++++..+. .+. . ....++..+.+|+...+.|
T Consensus 20 ~i~v~~G~~V~~~--n~~~~------~H~~~~~~~~~~-----~~~------~------~~~~~~~~~~~g~~~~~tf-- 72 (97)
T 1b3i_A 20 ALSISAGDTVEFV--MNKVG------PHNVIFDKVPAG-----ESA------P------ALSNTKLAIAPGSFYSVTL-- 72 (97)
T ss_dssp EEEECTTCEEEEE--ECSSC------CCCBEEEECCTT-----SCH------H------HHCBCCCCCSCSCCEEEEC--
T ss_pred EEEECCCCEEEEE--ECCCC------CeEEEEeCCCCc-----ccc------c------cccccceecCCCCEEEEEe--
Confidence 3899999998886 66655 899999876541 000 0 0114677788998888876
Q ss_pred CCceeeeecccchHhHHccceeeeec
Q 012467 410 DNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 410 dnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
+.||.|.|||+ .|.++||.+.+.+
T Consensus 73 ~~~G~y~y~C~--~H~~~gM~G~i~V 96 (97)
T 1b3i_A 73 GTPGTYSFYCT--PHRGAGMVGTITV 96 (97)
T ss_dssp CSCSEEEEECS--STTTTTCEEEEEE
T ss_pred CCCeEEEEEcc--ChhhcCCEEEEEE
Confidence 89999999999 8999999988865
|
| >1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A | Back alignment and structure |
|---|
Probab=98.38 E-value=6.5e-07 Score=71.04 Aligned_cols=81 Identities=14% Similarity=0.179 Sum_probs=59.1
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.+.++.|++|+| .|.+.. .|.||+++..|. .| ++.. .. ...+|++.+.+|+...+.|
T Consensus 18 ~i~v~~G~tV~~--~n~~~~------~H~~~~~~~~~p-----~g-~~~~-~~------~~~~~~~~~~~G~~~~~~f-- 74 (99)
T 1byp_A 18 DLSIASGEKITF--KNNAGF------PHNDLFDKKEVP-----AG-VDVT-KI------SMPEEDLLNAPGEEYSVTL-- 74 (99)
T ss_dssp EEEECTTEEEEE--EECSSC------CBCCEECTTSSC-----TT-CCHH-HH------SCCTTCCBCSTTCEEEEEE--
T ss_pred EEEECCCCEEEE--EECCCC------cceEEEeCCCCc-----cc-cccc-cc------cccccceeeCCCCEEEEEe--
Confidence 488999999887 577666 899999986441 01 1100 00 0125667889999888877
Q ss_pred CCceeeeecccchHhHHccceeeeec
Q 012467 410 DNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 410 dnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
+.||.|.|||+ .|.++||.+.|.+
T Consensus 75 ~~~G~y~~~C~--~H~~~gM~G~i~V 98 (99)
T 1byp_A 75 TEKGTYKFYCA--PHAGAGMVGKVTV 98 (99)
T ss_dssp CSCEEEEEECG--GGTTTTCEEEEEE
T ss_pred CCCcEEEEEcC--CccccCCEEEEEE
Confidence 59999999999 8999999998865
|
| >4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A | Back alignment and structure |
|---|
Probab=98.35 E-value=1.4e-06 Score=69.28 Aligned_cols=71 Identities=15% Similarity=0.282 Sum_probs=58.0
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.+.++.|+.|+|++.|.+.. .|.|.+.+..+ ...+.+|....+.|++
T Consensus 29 ~i~v~~G~tV~~~~~n~d~~------~H~~~~~~~~~---------------------------~~~~~pg~~~~~~~t~ 75 (100)
T 4hci_A 29 VITIPINESTTLLLKNKGKS------EHTFTIKKLGI---------------------------DVVVESGKEKNITVKP 75 (100)
T ss_dssp EEEECTTSCEEEEEEECSSS------CEEEEEGGGTE---------------------------EEEECTTCEEEEEECC
T ss_pred EEEECCCCEEEEEEEcCCCc------eEEEEEecCCc---------------------------ceeecCCcceeEEEec
Confidence 38999999999999998765 67766544322 2346788999999999
Q ss_pred CCceeeeecccchHhHHccceeeeec
Q 012467 410 DNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 410 dnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
+.||.|.|+|. .|...||.+.+.+
T Consensus 76 ~~~G~Y~y~C~--~H~~~gM~G~i~V 99 (100)
T 4hci_A 76 KSAGTYELICR--YHLLKGMEGKVIV 99 (100)
T ss_dssp CSCEEEEEECT--TTGGGTCEEEEEE
T ss_pred ccCceEEEECc--cccCCCCEEEEEE
Confidence 99999999997 6999999988765
|
| >1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A | Back alignment and structure |
|---|
Probab=98.34 E-value=1.5e-06 Score=70.72 Aligned_cols=72 Identities=19% Similarity=0.337 Sum_probs=56.5
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.+.++.|+.|+|++.|.+.. .|-|++... .-+..+.||+...+.|.+
T Consensus 39 ~i~v~~G~~V~~~~~n~d~~------~H~~~i~~~---------------------------~~~~~i~pG~~~~~~f~~ 85 (112)
T 1iby_A 39 TLVVKKGDAVKVVVENKSPI------SEGFSIDAF---------------------------GVQEVIKAGETKTISFTA 85 (112)
T ss_dssp EEEEETTCEEEEEEEECSSS------CEEEEEGGG---------------------------TEEEEECTTCEEEEEEEC
T ss_pred EEEEeCCCEEEEEEEECCCC------eEEEEEcCC---------------------------CceeEeCCCCEEEEEEEC
Confidence 38999999999999998754 455544321 125678999999999999
Q ss_pred CCceeeeecccchHhHHccceeeeec
Q 012467 410 DNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 410 dnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
++||.|.||||+..|... |.+.+.+
T Consensus 86 ~~~G~y~~~C~~~~~~~~-M~g~i~V 110 (112)
T 1iby_A 86 DKAGAFTIWCQLHPKNIH-LPGTLNV 110 (112)
T ss_dssp CSCEEEEEBCSSSCTTTB-CCEEEEE
T ss_pred CCCEEEEEECCCCCchHH-CEEEEEE
Confidence 999999999998877543 8777754
|
| >3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* | Back alignment and structure |
|---|
Probab=98.25 E-value=6.3e-06 Score=85.52 Aligned_cols=70 Identities=10% Similarity=0.063 Sum_probs=53.3
Q ss_pred eEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEec
Q 012467 116 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVR 195 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~ 195 (463)
|+|.++.|+++++|+.|.... ...++.+|-...- ..||.+-. .|.||++++..+++++ .+|+||-.....
T Consensus 69 PtI~~~~Gd~v~v~v~N~l~~-~tsiHwHGl~~~~-~~DG~~~~-------~i~PG~~~~Y~f~~~~-~~GT~WYH~H~~ 138 (534)
T 3abg_A 69 PTFQVPRGVETVVRFINNAEA-PNSVHLHGSFSRA-AFDGWAED-------ITEPGSFKDYYYPNRQ-SARTLWYHDHAM 138 (534)
T ss_dssp EEEEEETTCCEEEEEEECSSS-CBCEEEETCCCCT-TTTTCSSS-------CBSSCSCCCEEECCCS-SSCEEEEEECCT
T ss_pred ceEEEeCCcEEEEEEEECCCC-CceEEECCCcCCC-CCCCCCCC-------CCCCCCeEEEEEecCC-cceeEEEecCcc
Confidence 689999999999999999753 4556666643221 47886422 3789999999998887 578999988754
|
| >1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A | Back alignment and structure |
|---|
Probab=98.25 E-value=1.4e-06 Score=69.53 Aligned_cols=83 Identities=17% Similarity=0.183 Sum_probs=57.4
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCc-cceEEeCCCcEEEEEEE
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPL-KNTAVIFPYGWTALRFV 408 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~-rDTv~v~~~g~~~irf~ 408 (463)
.+.++.|++|+|+ |.+.. .|.++++.-... .+.+. .... .+.+ .+++.+.+|+...+.|
T Consensus 18 ~i~v~~G~tV~~~--n~~~~------~H~~~~~~~~~~-----~~~~~--~~~~----~~~~~~~~~~~~pG~~~~~tf- 77 (102)
T 1kdj_A 18 SITVSAGEAVEFT--LVGET------GHNIVFDIPAGA-----PGTVA--SELK----AASMDENDLLSEDEPSFKAKV- 77 (102)
T ss_dssp EEEECTTCCEEEE--ECSSS------CBCCEECCCTTC-----CHHHH--HHHH----HTSCCTTCCBBTTBCEEEECC-
T ss_pred EEEECCCCEEEEE--ECCCC------CeEEEEeCcccc-----ccccc--chhh----cccccccceecCCCCEEEEEe-
Confidence 4899999999876 76655 899998731110 00000 0000 0122 4677888999888876
Q ss_pred cCCceeeeecccchHhHHccceeeeec
Q 012467 409 ADNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 409 adnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
+.||.|.|||+ .|..+||.+.|.+
T Consensus 78 -~~~G~y~y~C~--~H~~~gM~G~i~V 101 (102)
T 1kdj_A 78 -STPGTYTFYCT--PHKSANMKGTLTV 101 (102)
T ss_dssp -CSCEEEEEECS--TTGGGTCEEEEEE
T ss_pred -CCCeEEEEEeC--CCcccCCeEEEEE
Confidence 89999999999 9999999998865
|
| >2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A | Back alignment and structure |
|---|
Probab=98.23 E-value=3.2e-06 Score=87.51 Aligned_cols=72 Identities=15% Similarity=0.116 Sum_probs=57.1
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCC-ceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEE
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGH-DFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFV 408 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~-~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~ 408 (463)
.+.++.+ +++|.|.|.+... .+.||++|| .|+|++. +|.+. ..|...|++.|.+|+.+.|.++
T Consensus 242 ~~~v~~~-~~RlRliNa~~~~-----~~~~~i~~~~~~~via~-DG~~~---------~~P~~~~~l~l~pgeR~dvlv~ 305 (513)
T 2wsd_A 242 YLEVEPR-KYRFRVINASNTR-----TYNLSLDNGGDFIQIGS-DGGLL---------PRSVKLNSFSLAPAERYDIIID 305 (513)
T ss_dssp EEECCSS-EEEEEEEECCSSC-----CEEEEETTCCCEEEEEE-TTEEE---------EEEEEESEEEECTTCEEEEEEE
T ss_pred eEEecCC-EEEEEEEccCCcc-----eEEEEECCCCeEEEEcc-CCCcc---------cCceEeCeEEECCeeeEEEEEE
Confidence 4677764 8999999988652 789999999 9999998 44331 1345679999999999999999
Q ss_pred cCC-ceeeee
Q 012467 409 ADN-PGAWAF 417 (463)
Q Consensus 409 adn-pG~w~~ 417 (463)
++. +|.|+.
T Consensus 306 ~~~~~g~~~~ 315 (513)
T 2wsd_A 306 FTAYEGESII 315 (513)
T ss_dssp CGGGTTCEEE
T ss_pred CCCCCCcEEE
Confidence 876 787654
|
| >1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A | Back alignment and structure |
|---|
Probab=98.04 E-value=5.6e-06 Score=65.58 Aligned_cols=81 Identities=14% Similarity=0.189 Sum_probs=57.6
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.+.++.|++|+| .|.+.. .|.++++...+- .| .+.. .. ...++.+.+.+|+...+.|
T Consensus 18 ~i~v~~G~tV~~--~n~~~~------~H~v~~~~~~~p-----~~-~~~~-~~------~~~~~~~~~~~G~~~~~tf-- 74 (99)
T 1plc_A 18 EFSISPGEKIVF--KNNAGF------PHNIVFDEDSIP-----SG-VDAS-KI------SMSEEDLLNAKGETFEVAL-- 74 (99)
T ss_dssp EEEECTTCEEEE--EECSSC------CBCCEECTTSSC-----TT-CCHH-HH------CCCTTCCBCSTTCEEEEEC--
T ss_pred EEEECCCCEEEE--EECCCC------ceEEEEeCCCCc-----cc-cccc-cc------ccccCccccCCCCEEEEEE--
Confidence 489999999987 577655 899999875431 01 0000 00 0124556788999888766
Q ss_pred CCceeeeecccchHhHHccceeeeec
Q 012467 410 DNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 410 dnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
+.||.|.|||+ .|..+||.+.+.+
T Consensus 75 ~~~G~y~~~C~--~H~~~gM~G~i~V 98 (99)
T 1plc_A 75 SNKGEYSFYCS--PHQGAGMVGKVTV 98 (99)
T ss_dssp CSCEEEEEECG--GGTTTTCEEEEEE
T ss_pred CCCceEEEEcC--CCcccCCEEEEEE
Confidence 59999999999 7999999988865
|
| >2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A | Back alignment and structure |
|---|
Probab=98.00 E-value=1.5e-05 Score=68.46 Aligned_cols=82 Identities=20% Similarity=0.306 Sum_probs=58.4
Q ss_pred EEEccCCCEEEEEEEeCC-CCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccce-------EEeCCCc
Q 012467 330 VYMLGLNTTVDVILQNAN-AIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNT-------AVIFPYG 401 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~-~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDT-------v~v~~~g 401 (463)
.++++.|+.|.+++.|.+ .+ .|-|-++.. +. .+.. .|.-.+. ..|.||+
T Consensus 62 ~i~V~~GD~V~~~~tN~~~~~------~H~~~i~~~-------~~-~~~~---------~~~~~~~~~~~~~~~~i~PG~ 118 (154)
T 2cal_A 62 TLEIPAGATVDVTFINTNKGF------GHSFDITKK-------GP-PYAV---------MPVIDPIVAGTGFSPVPKDGK 118 (154)
T ss_dssp EEEECTTCEEEEEEEECCTTC------CCCCEEESC-------CS-CCCS---------SCCCCSEEEEBCCCCCCBTTB
T ss_pred EEEEeCCCEEEEEEEcCCCCe------eeEEEEeec-------Cc-chhc---------cccccccccccccccccCCCC
Confidence 489999999999999974 33 566555521 10 0100 0001111 2567888
Q ss_pred --EEEEEEEcCCceeeeecccchHhHHccceeeeec
Q 012467 402 --WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 402 --~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
...+.|++ .||.+.||||+.-|...||-+.+.+
T Consensus 119 sgt~t~tft~-~pGtY~y~C~~~gH~~~GM~G~IiV 153 (154)
T 2cal_A 119 FGYTDFTWHP-TAGTYYYVCQIPGMAATGMFGKIVV 153 (154)
T ss_dssp EEEEEEEECC-CSEEEEEECCSTTTGGGTCEEEEEE
T ss_pred ceEEEEEEEE-CCceEEEECCCCCHHHCCCEEEEEE
Confidence 99999999 9999999999999999999988764
|
| >3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... | Back alignment and structure |
|---|
Probab=98.00 E-value=1.7e-05 Score=80.97 Aligned_cols=74 Identities=14% Similarity=0.187 Sum_probs=62.7
Q ss_pred EEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccce---eeEeeEEecCCceEEEEEecCCCC--CCceEEE
Q 012467 117 ILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQP---FEVDDMDIYSGESYSVLLTTNQDP--SYNYWIS 191 (463)
Q Consensus 117 ~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P---~~~~~l~i~~GeR~dvlV~~~~~~--~g~y~ir 191 (463)
.++++.|+++||+|+|.+....+.|+|++|.|+|++.||..+.| ...|++.|. ||+..|+++++... +|.|-+.
T Consensus 393 ~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~~~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~~G~~m~H 471 (488)
T 3od3_A 393 MFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVE-GNVSEVLVKFNHDAPKEHAYMAH 471 (488)
T ss_dssp SEECCBSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCCCGGGSSSBSEEEES-SSEEEEEECBCSCCCGGGCEEEE
T ss_pred ceEcCCCCEEEEEEEeCCCCCCccEEEcCceEEEeccCCCccccccCCceeEEEeC-CCEEEEEEEeccCCCCCCCEEEe
Confidence 57899999999999999876779999999999999999998754 357999999 99999999998632 3556544
|
| >2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ... | Back alignment and structure |
|---|
Probab=97.86 E-value=3.8e-05 Score=61.47 Aligned_cols=71 Identities=23% Similarity=0.278 Sum_probs=50.7
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.+.++.|+.|+|+ |.+.. .|.+|+|+.. .|.- .+ ++-.+.+|+...+.|
T Consensus 34 ~i~v~~Gd~V~~~--N~d~~------~H~v~~~~~~-------~g~~-------------~~-~~~~~~pG~~~~~tf-- 82 (105)
T 2ov0_A 34 ELHVKVGDTVTWI--NREAM------PHNVHFVAGV-------LGEA-------------AL-KGPMMKKEQAYSLTF-- 82 (105)
T ss_dssp EEEECTTCEEEEE--ECSSS------CBCCEECTTT-------SSSS-------------CE-ECCCBCTTEEEEEEE--
T ss_pred EEEECCCCEEEEE--ECCCC------CEEEEEcCCC-------CCcc-------------cc-cccccCCCCEEEEEe--
Confidence 4899999999885 77665 8999988532 1110 01 122367888777666
Q ss_pred CCceeeeecccchHhHHccceeeeec
Q 012467 410 DNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 410 dnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
+.||.+.|||++ |. ||.+.|.+
T Consensus 83 ~~~G~y~y~C~~--H~--gM~G~i~V 104 (105)
T 2ov0_A 83 TEAGTYDYHCTP--HP--FMRGKVVV 104 (105)
T ss_dssp CSCEEEEEECSS--CT--TCEEEEEE
T ss_pred CCCEEEEEEeCC--CC--CCEEEEEE
Confidence 799999999997 65 99887754
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=97.77 E-value=5.5e-05 Score=78.43 Aligned_cols=77 Identities=22% Similarity=0.289 Sum_probs=60.4
Q ss_pred eEEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEE
Q 012467 329 GVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFV 408 (463)
Q Consensus 329 ~~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~ 408 (463)
..+.++.|+.|+|++.|.+.. ....|.|+++++.+. ..+.||....++|+
T Consensus 513 p~I~V~~Gd~V~~~ltN~d~~---~Dv~Hgf~ip~~gv~---------------------------~~i~PG~t~t~~Ft 562 (595)
T 1fwx_A 513 ESFTVKEGDEVTVIVTNLDEI---DDLTHGFTMGNYGVA---------------------------MEIGPQMTSSVTFV 562 (595)
T ss_dssp SEEEEETTCEEEEEEEECCCS---TTCCEEEEETTTTEE---------------------------EEECTTCEEEEEEE
T ss_pred CEEEEECCCEEEEEEEeCCCC---CCceeeEEecCCCcc---------------------------eeeCCCCeEEEEEE
Confidence 468899999999999996431 011688888875422 35778999999999
Q ss_pred cCCceeeeeccc---chHhHHccceeeeeccc
Q 012467 409 ADNPGAWAFHCH---IEPHFHIGMGVVLALGV 437 (463)
Q Consensus 409 adnpG~w~~HCH---i~~H~~~GM~~~~~~~~ 437 (463)
++.||.|.|||| ...|. ||.+.+.+.+
T Consensus 563 a~~pGtY~yhC~e~Cg~~H~--gM~G~IiV~p 592 (595)
T 1fwx_A 563 AANPGVYWYYCQWFCHALHM--EMRGRMLVEP 592 (595)
T ss_dssp CCSCEEEEEECCSCCSTTCT--TCEEEEEEEC
T ss_pred CCCCEEEEEECCCCCCCCcc--CCEEEEEEEc
Confidence 999999999999 45775 9999887654
|
| >3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=97.56 E-value=0.0007 Score=71.47 Aligned_cols=81 Identities=11% Similarity=-0.069 Sum_probs=50.3
Q ss_pred EEccCCCEEEEEEEeCCCCCCC--CCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEE
Q 012467 331 YMLGLNTTVDVILQNANAIRPN--LSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFV 408 (463)
Q Consensus 331 ~~~~~g~~v~~vl~N~~~~~~~--~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~ 408 (463)
+.++ +.+++|+|+|.+....- .-+.|-.++.++.|+||+. +|.+-. +.+....|...+++.|.+|+++.|-++
T Consensus 267 ~~v~-~~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa~-DG~~l~---~Pv~v~~p~~~~~l~i~pGeRydVlV~ 341 (612)
T 3gyr_A 267 ADVD-DGWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGS-DGGLLP---RPVPVDFDDTLPVLSAAPAERFDLLVD 341 (612)
T ss_dssp EEEE-SSEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEE-TTEEEE---EEEEECSSSSSSSEEECTTCEEEEEEE
T ss_pred Eecc-CcEEEEEEEeccCCcceeEEEccCCCccCCceEEEEEe-CCCccc---cceeccCcccccEEEeccceEEEEEEE
Confidence 4444 55899999998754100 0013444455567999998 443321 111122345678999999999999999
Q ss_pred cCC-ceeee
Q 012467 409 ADN-PGAWA 416 (463)
Q Consensus 409 adn-pG~w~ 416 (463)
++. +|.++
T Consensus 342 ~~~~~~~~~ 350 (612)
T 3gyr_A 342 FRALGGRRL 350 (612)
T ss_dssp CTTCTTCEE
T ss_pred CCCCCceEE
Confidence 876 45443
|
| >1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A | Back alignment and structure |
|---|
Probab=97.21 E-value=0.0013 Score=51.56 Aligned_cols=79 Identities=10% Similarity=0.171 Sum_probs=53.6
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.+.++.|++|+|+ |.+.. .|-+.+....+ ...++. . ....+...+.+|+...+.|
T Consensus 19 ~i~v~~GdtV~~~--n~~~~------~H~v~~~~~~~------p~g~~~---~------~~~~~~~~~~~g~~~~~tf-- 73 (98)
T 1iuz_A 19 KISVAAGEAIEFV--NNAGF------PHNIVFDEDAV------PAGVDA---D------AISYDDYLNSKGETVVRKL-- 73 (98)
T ss_dssp EEEECTTCEEEEE--ECSSC------CEEEEECTTSS------CTTCCH---H------HHCEEEEECSTTCEEEEEC--
T ss_pred EEEECCCCEEEEE--ECCCC------CEEEEEeCCCC------cccccc---c------cccccccccCCCCEEEEEc--
Confidence 4899999999986 66545 67766554110 000100 0 0113446788999887776
Q ss_pred CCceeeeecccchHhHHccceeeeec
Q 012467 410 DNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 410 dnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
+.||.+.|+|-+ |..+||.+.+.+
T Consensus 74 ~~~G~y~y~C~~--H~~~gM~G~I~V 97 (98)
T 1iuz_A 74 STPGVYGVYCEP--HAGAGMKMTITV 97 (98)
T ss_dssp CSCEEEEEECTT--TGGGTCEEEEEE
T ss_pred CCCEEEEEEchh--hccCCCEEEEEE
Confidence 799999999986 999999988764
|
| >3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0 | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0006 Score=55.94 Aligned_cols=73 Identities=15% Similarity=0.186 Sum_probs=51.1
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.++++.|++|+|+..+ . .|-+..+.. .+. .-.+.+.+.+|....+.|
T Consensus 23 ~i~V~~GDTV~f~n~~---~------~Hnv~~~~~----------~~p------------~g~~~~~~~pg~t~s~TF-- 69 (124)
T 3ef4_A 23 FVKVEAGDTVKFVPTD---K------SHNAESVRE----------VWP------------EGVAPVKGGFSKEVVFNA-- 69 (124)
T ss_dssp EEEECTTCEEEEECSS---S------SCCCEECTT----------TSC------------TTSCCCBCCTTCCEEEEC--
T ss_pred EEEECCCCEEEEEECC---C------CccEEEeCC----------cCC------------CCccccccCCCCEEEEEe--
Confidence 4899999999988543 3 677766522 111 001222345777766666
Q ss_pred CCceeeeecccchHhHHccceeeeeccc
Q 012467 410 DNPGAWAFHCHIEPHFHIGMGVVLALGV 437 (463)
Q Consensus 410 dnpG~w~~HCHi~~H~~~GM~~~~~~~~ 437 (463)
+.||.|.|||- .|..+||.+.+.++.
T Consensus 70 ~~~G~y~Y~C~--~H~~~GM~G~I~V~~ 95 (124)
T 3ef4_A 70 EKEGLYVLKCA--PHYGMGMVVLVQVGK 95 (124)
T ss_dssp CSSEEEEEECT--TTGGGTCEEEEEESS
T ss_pred CCCeEEEEEcC--CCCcCCCEEEEEECC
Confidence 79999999996 899999999997764
|
| >1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0013 Score=52.56 Aligned_cols=71 Identities=17% Similarity=0.188 Sum_probs=49.7
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.+.++.|+.|+|+ |.+.. .|.+++....- +.. ..++-.+.+|+...+.|
T Consensus 35 ~i~V~~G~tV~~~--N~d~~------~H~v~~~~~~~-----~~~----------------~~~s~~l~~g~~~~~tf-- 83 (106)
T 1id2_A 35 EVTIKAGETVYWV--NGEVM------PHNVAFKKGIV-----GED----------------AFRGEMMTKDQAYAITF-- 83 (106)
T ss_dssp EEEECTTCEEEEE--ECSSS------CBCCEECTTTS-----SSS----------------CEECCCBCTTEEEEEEE--
T ss_pred EEEECCCCEEEEE--ECCCC------cEEEEEeCCCC-----Ccc----------------cccccccCCCCEEEEEe--
Confidence 4899999999987 76655 68776654220 000 11233467888877777
Q ss_pred CCceeeeecccchHhHHccceeeeec
Q 012467 410 DNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 410 dnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
+.||.+.|+|-+ |. ||.+.+.+
T Consensus 84 ~~~G~y~~~C~~--H~--~M~G~I~V 105 (106)
T 1id2_A 84 NEAGSYDYFCTP--HP--FMRGKVIV 105 (106)
T ss_dssp CSCEEEEEECSS--CT--TCEEEEEE
T ss_pred CCCEEEEEEeCC--CC--CCEEEEEE
Confidence 799999999987 76 99888764
|
| >2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus} | Back alignment and structure |
|---|
Probab=97.12 E-value=0.00087 Score=56.33 Aligned_cols=70 Identities=19% Similarity=0.273 Sum_probs=50.6
Q ss_pred CceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCC-----------------cccc----eeeEeeEEecCCc
Q 012467 114 APQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADG-----------------NYVQ----PFEVDDMDIYSGE 172 (463)
Q Consensus 114 ~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG-----------------~~v~----P~~~~~l~i~~Ge 172 (463)
.+..|+|++|++++|+|.|.+... .|.|.+...+. .++. ....++..|.|||
T Consensus 33 ~p~~i~v~~G~~V~~~~~N~~~~~-------~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGe 105 (139)
T 2aan_A 33 DKTELTVSAGQTVTIRFKNNSAVQ-------QHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNE 105 (139)
T ss_dssp SCSEEEECTTCEEEEEEECCCSSC-------CBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTC
T ss_pred cCCeEEECCCCEEEEEEEeCCCCC-------CeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCC
Confidence 345899999999999999987542 57776665331 1221 1234667799999
Q ss_pred eEEEEEecCCCCCCceEEEE
Q 012467 173 SYSVLLTTNQDPSYNYWISA 192 (463)
Q Consensus 173 R~dvlV~~~~~~~g~y~ir~ 192 (463)
++++.+++++ +|.|++.=
T Consensus 106 t~~v~f~~~~--pG~y~f~C 123 (139)
T 2aan_A 106 TVEVTFTAPA--AGTYLYIC 123 (139)
T ss_dssp EEEEEEECCS--SEEEEEEC
T ss_pred EEEEEEECCC--CeEEEEEc
Confidence 9999999875 68998753
|
| >3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0011 Score=54.35 Aligned_cols=73 Identities=15% Similarity=0.199 Sum_probs=51.1
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.++++.|++|.|++.| . .|-+..+.. .+. .-.+.+.+.+|+...+.|
T Consensus 22 ~i~V~~GdtV~f~~~~---~------~H~v~~~~~----------~~P------------~g~~~f~~~pg~t~s~TF-- 68 (123)
T 3erx_A 22 FVRAEPGDVINFVPTD---K------SHNVEAIKE----------ILP------------EGVESFKSKINESYTLTV-- 68 (123)
T ss_dssp EEEECTTEEEEEEESS---T------TCCCEECTT----------SSC------------TTCCCCBCCTTCCEEEEE--
T ss_pred EEEECCCCEEEEEECC---C------CceEEEcCC----------cCC------------CCccceecCCCCEEEEEe--
Confidence 3899999999999776 2 566665421 010 000112235777776666
Q ss_pred CCceeeeecccchHhHHccceeeeeccc
Q 012467 410 DNPGAWAFHCHIEPHFHIGMGVVLALGV 437 (463)
Q Consensus 410 dnpG~w~~HCHi~~H~~~GM~~~~~~~~ 437 (463)
+.||.|.|+|- .|...||.+.+.++.
T Consensus 69 ~~pG~y~y~C~--~H~~~GM~G~I~V~~ 94 (123)
T 3erx_A 69 TEPGLYGVKCT--PHFGMGMVGLVQVGD 94 (123)
T ss_dssp CSCEEEEEECG--GGTTTTCEEEEEESS
T ss_pred CCCeEEEEEeC--CCCcCCcEEEEEECC
Confidence 79999999999 899999999997763
|
| >3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.98 E-value=0.00094 Score=55.11 Aligned_cols=73 Identities=19% Similarity=0.210 Sum_probs=48.8
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.++++.|++|.|++.|. .|-+..+... +. .-...+.+.+|+...+.|
T Consensus 24 ~i~V~~GDtVtf~n~~~---------~H~v~~~~~~----------~P------------~g~~~f~s~pGet~s~TF-- 70 (127)
T 3tu6_A 24 VIRAQPGDTVTFVAKDK---------GHNSALMKGG----------AP------------EGAETWKGKINEEITVTL-- 70 (127)
T ss_dssp EEEECTTCEEEEECSSS---------SCCCEECTTC----------SC------------TTCCCCBCCTTCCCEEEC--
T ss_pred EEEECCCCEEEEEECCC---------CceEEEccCc----------CC------------CCccceecCCCCEEEEEe--
Confidence 48999999999986542 4655544210 00 000112234677655555
Q ss_pred CCceeeeecccchHhHHccceeeeeccc
Q 012467 410 DNPGAWAFHCHIEPHFHIGMGVVLALGV 437 (463)
Q Consensus 410 dnpG~w~~HCHi~~H~~~GM~~~~~~~~ 437 (463)
+.||.|.|||- .|...||.+.+.+++
T Consensus 71 ~~pG~y~y~C~--~H~~~GM~G~I~V~~ 96 (127)
T 3tu6_A 71 SKPGVYMYQCA--PHVGMGMIGAIVVGE 96 (127)
T ss_dssp CSCEEEEEECT--TTGGGTCEEEEEESS
T ss_pred CCCeEEEEEeC--CCCcCCcEEEEEECc
Confidence 89999999999 699999999997664
|
| >3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0022 Score=53.32 Aligned_cols=71 Identities=15% Similarity=0.164 Sum_probs=50.2
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.+.++.|++|+|+ |.+.. .|-+++.... .|. ..-++-.+.+|+...+.|
T Consensus 61 ~i~V~~GdtV~~~--N~d~~------~H~v~~~~~~-------~g~--------------~~~~s~~l~pG~t~~~tF-- 109 (132)
T 3c75_A 61 EVTIKAGETVYWV--NGEVM------PHNVAFKKGI-------VGE--------------DAFRGEMMTKDQAYAITF-- 109 (132)
T ss_dssp EEEECTTCEEEEE--ECSSS------CBCCEECTTT-------SSS--------------SCEECCCBCTTEEEEEEE--
T ss_pred EEEECCCCEEEEE--ECCCC------ceEEEEeCCC-------CCc--------------ccccccccCCCCEEEEEc--
Confidence 4899999999986 76655 7887765322 010 011233567888877777
Q ss_pred CCceeeeecccchHhHHccceeeeec
Q 012467 410 DNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 410 dnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
+.||.+.|+|-+ |. ||.+.+.+
T Consensus 110 ~~~G~y~y~C~~--H~--gM~G~I~V 131 (132)
T 3c75_A 110 NEAGSYDYFCTP--HP--FMRGKVIV 131 (132)
T ss_dssp CSCEEEEEECSS--CT--TCEEEEEE
T ss_pred CCCEEEEEEeCC--Cc--CCEEEEEE
Confidence 799999999987 76 99888764
|
| >1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0084 Score=48.07 Aligned_cols=59 Identities=17% Similarity=0.317 Sum_probs=44.8
Q ss_pred ceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEE
Q 012467 115 PQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA 192 (463)
Q Consensus 115 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~ 192 (463)
++.|+|++|+++||++.|.... .+.|.+.+. | -...+.||+.+++.+++++ +|.|+..-
T Consensus 37 p~~i~v~~G~~V~~~~~n~d~~-~H~~~i~~~--------~--------~~~~i~pG~~~~~~f~~~~--~G~y~~~C 95 (112)
T 1iby_A 37 PETLVVKKGDAVKVVVENKSPI-SEGFSIDAF--------G--------VQEVIKAGETKTISFTADK--AGAFTIWC 95 (112)
T ss_dssp SCEEEEETTCEEEEEEEECSSS-CEEEEEGGG--------T--------EEEEECTTCEEEEEEECCS--CEEEEEBC
T ss_pred CCEEEEeCCCEEEEEEEECCCC-eEEEEEcCC--------C--------ceeEeCCCCEEEEEEECCC--CEEEEEEC
Confidence 3579999999999999999843 344444432 1 1567999999999999875 79998753
|
| >3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae} | Back alignment and structure |
|---|
Probab=96.54 E-value=0.0052 Score=53.01 Aligned_cols=94 Identities=13% Similarity=0.148 Sum_probs=59.3
Q ss_pred EEc-cCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCc---c--ccccCCCC---C-CCccceEEeCCC
Q 012467 331 YML-GLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTK---E--DEKKFNLK---N-PPLKNTAVIFPY 400 (463)
Q Consensus 331 ~~~-~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~---~--~~~~~n~~---~-p~~rDTv~v~~~ 400 (463)
+.+ +.|+.|.|+|.|.+.. .. --=+|.|-+...+ .+.. + .....++. + -....+..|.+|
T Consensus 60 itV~kaG~~Vtv~~~N~g~~------p~--~~m~Hn~vi~~~~--~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pG 129 (167)
T 3ay2_A 60 IQVSKACKEFTITLKHTGTQ------PK--ASMGHNLVIAKAE--DMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGG 129 (167)
T ss_dssp EEEETTCSSEEEEEEECSCS------CH--HHHCBCCEEEEGG--GHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTT
T ss_pred EEEecCCCEEEEEEEECCCC------cc--ccccceEEeccCc--chhhhHHHhhhccccccccccccchhccceeeCCC
Confidence 889 9999999999998743 20 0002334333321 0000 0 00000000 0 123456678999
Q ss_pred cEEEEEEEcC--CceeeeecccchHhHHccceeeeec
Q 012467 401 GWTALRFVAD--NPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 401 g~~~irf~ad--npG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
+...|.|.+. .||.+-|+|-+--|.. ||-+.|.+
T Consensus 130 et~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V 165 (167)
T 3ay2_A 130 EESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTL 165 (167)
T ss_dssp CEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEE
T ss_pred CEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEE
Confidence 9999999988 8999999999988988 89888765
|
| >1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A | Back alignment and structure |
|---|
Probab=96.35 E-value=0.002 Score=49.54 Aligned_cols=28 Identities=32% Similarity=0.539 Sum_probs=23.0
Q ss_pred cccccceeEEEeccchhhhhcceeeEEEEe
Q 012467 4 VWQVQAGTYFYHGHLGMQRSAGLYGSLIVD 33 (463)
Q Consensus 4 ~~~~~~GT~WYHsH~~~q~~~Gl~G~lIV~ 33 (463)
+...++|+|||||| .+...||.|.|+|+
T Consensus 64 ~~f~~~G~y~~~C~--~H~~~gM~g~i~V~ 91 (91)
T 1bxv_A 64 ATFSEPGTYTYYCE--PHRGAGMVGKIVVQ 91 (91)
T ss_dssp EECCSCEEEEEECT--TTGGGTCEEEEEEC
T ss_pred EEeCCCEEEEEEeC--CCccCCCEEEEEEC
Confidence 34478999999999 55666999999984
|
| >1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A | Back alignment and structure |
|---|
Probab=96.35 E-value=0.014 Score=48.18 Aligned_cols=94 Identities=16% Similarity=0.230 Sum_probs=59.6
Q ss_pred EEccCC-CEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCc--cc----cccCCCC---CC-CccceEEeCC
Q 012467 331 YMLGLN-TTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTK--ED----EKKFNLK---NP-PLKNTAVIFP 399 (463)
Q Consensus 331 ~~~~~g-~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~--~~----~~~~n~~---~p-~~rDTv~v~~ 399 (463)
+.++.| +.|.++|.|.+.. .. --=+|.|-+...+. ... .+ ....++. ++ ....+..|.|
T Consensus 20 i~V~~G~~~vtv~~~N~g~~------~~--~~m~H~~vi~~~~~--~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~p 89 (129)
T 1cuo_A 20 ISVPASCAEFTVNFEHKGHM------PK--TGMGHNWVLAKSAD--VGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGG 89 (129)
T ss_dssp EEEETTCSEEEEEEEECSSS------CH--HHHCBCCEEEEGGG--HHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCT
T ss_pred EEEcCCCeEEEEEEEECCCC------cc--cccccceEEecCcc--hhhhHHHhhhccccccccccccccceeeeeEECC
Confidence 899999 9999999998753 10 00023343433221 000 00 0000000 00 2335667899
Q ss_pred CcEEEEEEEcC---CceeeeecccchHhHHccceeeeec
Q 012467 400 YGWTALRFVAD---NPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 400 ~g~~~irf~ad---npG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
|+...|.|.++ .||.+-|.|-+--|.. ||-+.+.+
T Consensus 90 Get~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V 127 (129)
T 1cuo_A 90 GEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKL 127 (129)
T ss_dssp TCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEE
T ss_pred CCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEE
Confidence 99999999997 8999999999988988 89888765
|
| >1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A* | Back alignment and structure |
|---|
Probab=96.30 E-value=0.0086 Score=49.01 Aligned_cols=36 Identities=31% Similarity=0.574 Sum_probs=28.8
Q ss_pred CCCcEEEEEEEcCCceeeeecccchHhHHccceeeeeccc
Q 012467 398 FPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGV 437 (463)
Q Consensus 398 ~~~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~ 437 (463)
.+|+...+.| +.||.|.|+|- .|...||.+.+.+.+
T Consensus 59 ~pG~t~~~tF--~~~G~y~y~C~--~H~~~gM~G~I~V~~ 94 (123)
T 1paz_A 59 KINENYVLTV--TQPGAYLVKCT--PHYAMGMIALIAVGD 94 (123)
T ss_dssp CTTCCEEEEC--CSCEEEEEECT--TTGGGTCEEEEEESS
T ss_pred CCCCEEEEEe--CCCEEEEEEeC--CcccCCCEEEEEEcC
Confidence 4677655555 78999999997 599999999997654
|
| >3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.23 E-value=0.0031 Score=51.98 Aligned_cols=33 Identities=21% Similarity=0.451 Sum_probs=27.0
Q ss_pred cccccccceeEEEeccchhhhhcceeeEEEEeCCC
Q 012467 2 LDVWQVQAGTYFYHGHLGMQRSAGLYGSLIVDVAD 36 (463)
Q Consensus 2 ~~~~~~~~GT~WYHsH~~~q~~~Gl~G~lIV~~~~ 36 (463)
|++....+|+|||||- .+...||.|.|+|.++.
T Consensus 66 ~s~TF~~pG~y~y~C~--~H~~~GM~G~I~V~~~~ 98 (127)
T 3tu6_A 66 ITVTLSKPGVYMYQCA--PHVGMGMIGAIVVGEPA 98 (127)
T ss_dssp CEEECCSCEEEEEECT--TTGGGTCEEEEEESSCT
T ss_pred EEEEeCCCeEEEEEeC--CCCcCCcEEEEEECcCC
Confidence 3455578999999998 46678999999999864
|
| >3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A | Back alignment and structure |
|---|
Probab=96.20 E-value=0.0028 Score=51.92 Aligned_cols=32 Identities=19% Similarity=0.157 Sum_probs=26.4
Q ss_pred cccccccceeEEEeccchhhhhcceeeEEEEeCC
Q 012467 2 LDVWQVQAGTYFYHGHLGMQRSAGLYGSLIVDVA 35 (463)
Q Consensus 2 ~~~~~~~~GT~WYHsH~~~q~~~Gl~G~lIV~~~ 35 (463)
|++....+|+|||+|- .+...||.|.|+|.++
T Consensus 64 ~s~TF~~pG~y~y~C~--~H~~~GM~G~I~V~~~ 95 (123)
T 3erx_A 64 YTLTVTEPGLYGVKCT--PHFGMGMVGLVQVGDA 95 (123)
T ss_dssp EEEEECSCEEEEEECG--GGTTTTCEEEEEESSS
T ss_pred EEEEeCCCeEEEEEeC--CCCcCCcEEEEEECCC
Confidence 3445578999999998 6777899999999874
|
| >1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=96.06 E-value=0.0095 Score=48.74 Aligned_cols=37 Identities=27% Similarity=0.628 Sum_probs=29.6
Q ss_pred eCCCcEEEEEEEcCCceeeeecccchHhHHccceeeeeccc
Q 012467 397 IFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGV 437 (463)
Q Consensus 397 v~~~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~ 437 (463)
+.+|+...+.| +.||.|.|+|. .|...||.+.+.+.+
T Consensus 58 ~~pG~t~~~tF--~~~G~y~y~C~--~H~~~gM~G~I~V~~ 94 (123)
T 1pmy_A 58 TTVGQEAVVKF--DKEGVYGFKCA--PHYMMGMVALVVVGD 94 (123)
T ss_dssp CCTTSCEEEEC--CSCEEEEEECS--TTTTTTCEEEEEESS
T ss_pred cCCCCEEEEEe--CCCeEEEEEeC--CccccCCEEEEEEcC
Confidence 35777655555 78999999998 599999999997654
|
| >3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0 | Back alignment and structure |
|---|
Probab=95.98 E-value=0.0044 Score=50.74 Aligned_cols=33 Identities=12% Similarity=0.048 Sum_probs=26.8
Q ss_pred cccccccceeEEEeccchhhhhcceeeEEEEeCCC
Q 012467 2 LDVWQVQAGTYFYHGHLGMQRSAGLYGSLIVDVAD 36 (463)
Q Consensus 2 ~~~~~~~~GT~WYHsH~~~q~~~Gl~G~lIV~~~~ 36 (463)
|++....+|+|||||- .+...||.|.|+|.++.
T Consensus 65 ~s~TF~~~G~y~Y~C~--~H~~~GM~G~I~V~~p~ 97 (124)
T 3ef4_A 65 VVFNAEKEGLYVLKCA--PHYGMGMVVLVQVGKPV 97 (124)
T ss_dssp EEEECCSSEEEEEECT--TTGGGTCEEEEEESSCT
T ss_pred EEEEeCCCeEEEEEcC--CCCcCCCEEEEEECCCC
Confidence 3455578999999995 67778999999998753
|
| >1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A | Back alignment and structure |
|---|
Probab=95.91 E-value=0.012 Score=48.42 Aligned_cols=77 Identities=18% Similarity=0.257 Sum_probs=46.1
Q ss_pred CceEEEe-cCCCeEEEEEEecCcce----EEEEEEeCce-eEEEEe-------CCccccee----eEeeEEecCCceEEE
Q 012467 114 APQILHV-QPNKTYRLRIASTTALA----SLNLAVKNHK-MVVVEA-------DGNYVQPF----EVDDMDIYSGESYSV 176 (463)
Q Consensus 114 ~~~~~~v-~~g~~~RlRliNa~~~~----~~~~~i~~h~-~~via~-------DG~~v~P~----~~~~l~i~~GeR~dv 176 (463)
.+..|+| ++|++++|.|.|.+... .+.|.|.... +.-++. |-.++.+- ...+-.|.|||++++
T Consensus 16 ~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~sv 95 (128)
T 1nwp_A 16 NTKDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKDSV 95 (128)
T ss_dssp SCSEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEEEE
T ss_pred ecCEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEEEE
Confidence 3458999 99999999999998542 2444443221 000001 11233211 122336999999999
Q ss_pred EEecC--CCCCCceEEE
Q 012467 177 LLTTN--QDPSYNYWIS 191 (463)
Q Consensus 177 lV~~~--~~~~g~y~ir 191 (463)
.++++ + ++++|+..
T Consensus 96 tf~~~~l~-~G~~Y~f~ 111 (128)
T 1nwp_A 96 TFDVSKLA-AGEKYGFF 111 (128)
T ss_dssp EEEGGGSC-TTSCEEEE
T ss_pred EEeccccC-CCceEEEE
Confidence 99986 4 34559864
|
| >2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A | Back alignment and structure |
|---|
Probab=95.82 E-value=0.015 Score=47.92 Aligned_cols=77 Identities=21% Similarity=0.221 Sum_probs=46.3
Q ss_pred CceEEEe-cCCCeEEEEEEecCcce----EEEEEEeCce-eEEEE-------eCCcccce---e-eEeeEEecCCceEEE
Q 012467 114 APQILHV-QPNKTYRLRIASTTALA----SLNLAVKNHK-MVVVE-------ADGNYVQP---F-EVDDMDIYSGESYSV 176 (463)
Q Consensus 114 ~~~~~~v-~~g~~~RlRliNa~~~~----~~~~~i~~h~-~~via-------~DG~~v~P---~-~~~~l~i~~GeR~dv 176 (463)
.+..|+| ++|++++|.|.|.+... .+.|.|.+.. +.-++ .|-.++.+ . ...+-.|.|||++++
T Consensus 16 ~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~sv 95 (129)
T 2ccw_A 16 NVKEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESDSV 95 (129)
T ss_dssp SCSEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEE
T ss_pred ecceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCEEEE
Confidence 3458999 99999999999998542 3334443221 00000 01122221 1 123346899999999
Q ss_pred EEecC--CCCCCceEEE
Q 012467 177 LLTTN--QDPSYNYWIS 191 (463)
Q Consensus 177 lV~~~--~~~~g~y~ir 191 (463)
.++++ + ++++|+..
T Consensus 96 tf~~~~l~-~G~~Y~f~ 111 (129)
T 2ccw_A 96 TFDVSKIA-AGENYAYF 111 (129)
T ss_dssp EEEGGGSC-TTCCEEEE
T ss_pred EEeccccC-CCceEEEE
Confidence 99987 4 45669874
|
| >3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A | Back alignment and structure |
|---|
Probab=95.79 E-value=0.023 Score=58.03 Aligned_cols=79 Identities=22% Similarity=0.269 Sum_probs=57.0
Q ss_pred eEEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEE
Q 012467 329 GVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFV 408 (463)
Q Consensus 329 ~~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~ 408 (463)
..+.++.|+.|+|++.|.+... ...|.|.+.+.... +.+.||....+.|+
T Consensus 558 ~eI~VP~GdtVrfiLTN~D~ve---DViHSF~IPslGIK---------------------------~DaiPGrtnsvtFt 607 (638)
T 3sbq_A 558 QEFTVKQGDEVTVTITNIDQIE---DVSHGFVVVNHGVS---------------------------MEISPQQTSSITFV 607 (638)
T ss_dssp CEEEEETTCEEEEEEEECCCST---TCCEEEEETTTTEE---------------------------EEECTTCEEEEEEE
T ss_pred CEEEEecCceeEEEEecCCcCC---CceeeeEecCCCce---------------------------eeeCCCCeEEEEEE
Confidence 3578999999999999974210 01677666553321 25668999999999
Q ss_pred cCCceeeeecccchHhHH-ccceeeeeccc
Q 012467 409 ADNPGAWAFHCHIEPHFH-IGMGVVLALGV 437 (463)
Q Consensus 409 adnpG~w~~HCHi~~H~~-~GM~~~~~~~~ 437 (463)
++.||.+.++|...-|.. .+|.+.+.+.+
T Consensus 608 adkPGvY~y~CSE~CGa~Hs~M~G~ViVEP 637 (638)
T 3sbq_A 608 ADKPGLHWYYCSWFCHALHMEMVGRMMVEP 637 (638)
T ss_dssp CCSCEEEEEECCSCCSTTCTTCEEEEEEEC
T ss_pred cCCCEEEEEECCCcCCCCcccceEEEEEec
Confidence 999999999999754432 57888776643
|
| >4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A | Back alignment and structure |
|---|
Probab=95.70 E-value=0.041 Score=42.98 Aligned_cols=58 Identities=14% Similarity=0.277 Sum_probs=43.3
Q ss_pred ceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEE
Q 012467 115 PQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWIS 191 (463)
Q Consensus 115 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir 191 (463)
|..|+|++|++++|++.|.+.. .+.|.+++... ...+.||+..++.+++++ +|.|.+.
T Consensus 27 P~~i~v~~G~tV~~~~~n~d~~-~H~~~~~~~~~----------------~~~~~pg~~~~~~~t~~~--~G~Y~y~ 84 (100)
T 4hci_A 27 PNVITIPINESTTLLLKNKGKS-EHTFTIKKLGI----------------DVVVESGKEKNITVKPKS--AGTYELI 84 (100)
T ss_dssp SSEEEECTTSCEEEEEEECSSS-CEEEEEGGGTE----------------EEEECTTCEEEEEECCCS--CEEEEEE
T ss_pred CCEEEECCCCEEEEEEEcCCCc-eEEEEEecCCc----------------ceeecCCcceeEEEeccc--CceEEEE
Confidence 3479999999999999998743 24555544322 245789999999999886 6899764
|
| >2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C* | Back alignment and structure |
|---|
Probab=95.70 E-value=0.018 Score=47.34 Aligned_cols=78 Identities=19% Similarity=0.224 Sum_probs=45.5
Q ss_pred CceEEEe-cCCCeEEEEEEecCcce----EEEEEEeCce-eEEEE-------eCCcccc---ee-eEeeEEecCCceEEE
Q 012467 114 APQILHV-QPNKTYRLRIASTTALA----SLNLAVKNHK-MVVVE-------ADGNYVQ---PF-EVDDMDIYSGESYSV 176 (463)
Q Consensus 114 ~~~~~~v-~~g~~~RlRliNa~~~~----~~~~~i~~h~-~~via-------~DG~~v~---P~-~~~~l~i~~GeR~dv 176 (463)
.+..|+| ++|++++|.|.|.+... .+.|.|.... +.-++ .|-.++. +. ...+-.|.|||++++
T Consensus 15 ~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes~~v 94 (128)
T 2iaa_C 15 NTKSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGETDSV 94 (128)
T ss_dssp SCSEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEE
T ss_pred ecCEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCEEEE
Confidence 3458999 99999999999998542 2333333210 00000 1112222 11 123346899999999
Q ss_pred EEecCCCCCC-ceEEE
Q 012467 177 LLTTNQDPSY-NYWIS 191 (463)
Q Consensus 177 lV~~~~~~~g-~y~ir 191 (463)
.++++.-.+| +|+..
T Consensus 95 tf~~~~l~~G~~Y~f~ 110 (128)
T 2iaa_C 95 TFDVSKLKEGEDYAFF 110 (128)
T ss_dssp EEESSCCCTTCCEEEE
T ss_pred EEeccccCCCceEEEE
Confidence 9998721245 68764
|
| >3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A | Back alignment and structure |
|---|
Probab=95.63 E-value=0.012 Score=46.45 Aligned_cols=73 Identities=16% Similarity=0.307 Sum_probs=46.1
Q ss_pred CceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEE
Q 012467 114 APQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA 192 (463)
Q Consensus 114 ~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~ 192 (463)
.++.|+|++|++++| +|.+. ..+.+++.+..+.. .+|..-.....+.+.|.|||++++-++++. .+|.||+.-
T Consensus 17 ~p~~i~v~~Gd~V~~--~N~~~-~~H~v~~~~~~~~~--~~g~~~~~~~~~~~~i~pG~~~~~~f~~~~-~~G~y~y~C 89 (105)
T 3cvb_A 17 EPANVTVHPGDTVKW--VNNKL-PPHNILFDDKQVPG--ASKELADKLSHSQLMFSPGESYEITFSSDF-PAGTYTYYC 89 (105)
T ss_dssp ESSEEEECTTEEEEE--EECSS-CCEEEEECTTSSGG--GCHHHHHHHCEEEEECSTTCEEEEEECTTS-CSEEEEEEC
T ss_pred eCCEEEEcCCCEEEE--EECCC-CCCeEEEeCCCCCc--ccccccccccccccccCCCCeEEEEEecCC-CCeeEEEEe
Confidence 345899999998765 68763 34566666543221 011111111246688999999999887743 479999853
|
| >2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B* | Back alignment and structure |
|---|
Probab=95.54 E-value=0.044 Score=45.47 Aligned_cols=69 Identities=17% Similarity=0.314 Sum_probs=50.8
Q ss_pred EEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcC
Q 012467 331 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 410 (463)
Q Consensus 331 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~ad 410 (463)
+.++.|+.|+|++.|.+. .|. |++-+.+ --+.+.||....+.|+++
T Consensus 62 l~Vp~G~~V~~~vts~DV-------~Hs-------f~ip~~~--------------------~k~d~~PG~~~~~~~~~~ 107 (135)
T 2cua_A 62 IEVPQGAEIVFKITSPDV-------IHG-------FHVEGTN--------------------INVEVLPGEVSTVRYTFK 107 (135)
T ss_dssp EEEETTSEEEEEEEBSSS-------CEE-------EEETTSS--------------------CEEEECBTBCEEEEEECC
T ss_pred EEEcCCCEEEEEEEeCCc-------cce-------EEecCCC--------------------ceeEeCCCCcEEEEEEcC
Confidence 889999999999998753 344 4432211 114566788888999999
Q ss_pred Cceeeeecccc---hHhHHccceeeeec
Q 012467 411 NPGAWAFHCHI---EPHFHIGMGVVLAL 435 (463)
Q Consensus 411 npG~w~~HCHi---~~H~~~GM~~~~~~ 435 (463)
.||.+.++|.. ..| .+|-+.+.+
T Consensus 108 ~~G~y~~~C~e~CG~~H--~~M~g~v~V 133 (135)
T 2cua_A 108 RPGEYRIICNQYCGLGH--QNMFGTIVV 133 (135)
T ss_dssp SCEEEEEECCSCCSTTS--TTCEEEEEE
T ss_pred CCEEEEEECcccCCCCc--CCCEEEEEE
Confidence 99999999976 667 478776643
|
| >2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A | Back alignment and structure |
|---|
Probab=95.43 E-value=0.064 Score=44.12 Aligned_cols=94 Identities=16% Similarity=0.190 Sum_probs=57.8
Q ss_pred EEc-cCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcc--c----cccCCCC---CC-CccceEEeCC
Q 012467 331 YML-GLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKE--D----EKKFNLK---NP-PLKNTAVIFP 399 (463)
Q Consensus 331 ~~~-~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~--~----~~~~n~~---~p-~~rDTv~v~~ 399 (463)
+.+ +.|+.|.++|.|.+.. . ---=+|.|-+...+ .+..- + ...-++. ++ ....+..|.|
T Consensus 20 i~V~k~G~~vtv~~~N~g~~------p--~~~m~H~~vi~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~p 89 (129)
T 2ccw_A 20 IVVDKSCKQFTMHLKHVGKM------A--KVAMGHNLVLTKDA--DKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGG 89 (129)
T ss_dssp EEECTTCSEEEEEEEECSCC------C--HHHHCBCCEEEEGG--GHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCT
T ss_pred EEEecCCCEEEEEEEECCCc------c--cccCcceEEEcCcc--chhhhHHHhhhhcccccccccccccceeeeeEECC
Confidence 888 8899999999998753 2 00002334333321 00000 0 0000000 00 1234557899
Q ss_pred CcEEEEEEEcC--Ccee-eeecccchHhHHccceeeeec
Q 012467 400 YGWTALRFVAD--NPGA-WAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 400 ~g~~~irf~ad--npG~-w~~HCHi~~H~~~GM~~~~~~ 435 (463)
|+...|.|.++ .||. +-|.|-+--|.. ||-+.+.+
T Consensus 90 Get~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V 127 (129)
T 2ccw_A 90 GESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKL 127 (129)
T ss_dssp TCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEE
T ss_pred CCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEE
Confidence 99999999998 7765 999999988988 89888765
|
| >1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A* | Back alignment and structure |
|---|
Probab=95.18 E-value=0.013 Score=47.95 Aligned_cols=31 Identities=16% Similarity=0.209 Sum_probs=25.3
Q ss_pred ccccccceeEEEeccchhhhhcceeeEEEEeCC
Q 012467 3 DVWQVQAGTYFYHGHLGMQRSAGLYGSLIVDVA 35 (463)
Q Consensus 3 ~~~~~~~GT~WYHsH~~~q~~~Gl~G~lIV~~~ 35 (463)
++....+|+|||+|- .+...||.|.|+|.++
T Consensus 65 ~~tF~~~G~y~y~C~--~H~~~gM~G~I~V~~~ 95 (123)
T 1paz_A 65 VLTVTQPGAYLVKCT--PHYAMGMIALIAVGDS 95 (123)
T ss_dssp EEECCSCEEEEEECT--TTGGGTCEEEEEESSS
T ss_pred EEEeCCCEEEEEEeC--CcccCCCEEEEEEcCC
Confidence 445578999999996 4667799999999874
|
| >3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae} | Back alignment and structure |
|---|
Probab=95.14 E-value=0.025 Score=48.74 Aligned_cols=77 Identities=22% Similarity=0.264 Sum_probs=45.8
Q ss_pred ceEEEe-cCCCeEEEEEEecCcce----EEEEEEeCce-eEEEEe------CCcccce---e-eEeeEEecCCceEEEEE
Q 012467 115 PQILHV-QPNKTYRLRIASTTALA----SLNLAVKNHK-MVVVEA------DGNYVQP---F-EVDDMDIYSGESYSVLL 178 (463)
Q Consensus 115 ~~~~~v-~~g~~~RlRliNa~~~~----~~~~~i~~h~-~~via~------DG~~v~P---~-~~~~l~i~~GeR~dvlV 178 (463)
+..|+| ++|++++|.|.|.+... .+.|.|.... +.-++. +-.++.+ . ......|.|||+++|.+
T Consensus 57 P~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGet~svtf 136 (167)
T 3ay2_A 57 TKDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESSLTL 136 (167)
T ss_dssp CSEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTCEEEEEE
T ss_pred cceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceeeCCCCEEEEEE
Confidence 347999 99999999999998542 2333332211 000000 1122221 1 22345689999999999
Q ss_pred ecCCCCCCceEEE
Q 012467 179 TTNQDPSYNYWIS 191 (463)
Q Consensus 179 ~~~~~~~g~y~ir 191 (463)
+++...+|.|+..
T Consensus 137 ~~~~lkpG~Y~f~ 149 (167)
T 3ay2_A 137 DPAKLADGDYKFA 149 (167)
T ss_dssp CGGGGTTSCEEEE
T ss_pred ecCCCCCcEEEEE
Confidence 9872126889874
|
| >3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ... | Back alignment and structure |
|---|
Probab=95.13 E-value=0.023 Score=46.23 Aligned_cols=77 Identities=21% Similarity=0.285 Sum_probs=46.7
Q ss_pred ceEEEecC-CCeEEEEEEecCcce----EEEEEEeCc-eeEEEEe-------CCcccce----eeEeeEEecCCceEEEE
Q 012467 115 PQILHVQP-NKTYRLRIASTTALA----SLNLAVKNH-KMVVVEA-------DGNYVQP----FEVDDMDIYSGESYSVL 177 (463)
Q Consensus 115 ~~~~~v~~-g~~~RlRliNa~~~~----~~~~~i~~h-~~~via~-------DG~~v~P----~~~~~l~i~~GeR~dvl 177 (463)
+..|+|++ |+++||.|.|.|... .+.|-|... .+.-++. |-.|+.+ ....+-.|+|||++++.
T Consensus 17 p~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~~vt 96 (125)
T 3fsa_A 17 TNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDSVT 96 (125)
T ss_dssp CSEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEEEEE
T ss_pred cCEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEEEEE
Confidence 34899976 999999999999642 233333211 1111111 3344532 22345569999999999
Q ss_pred EecCC-CCCCceEEE
Q 012467 178 LTTNQ-DPSYNYWIS 191 (463)
Q Consensus 178 V~~~~-~~~g~y~ir 191 (463)
++++. .++|+|...
T Consensus 97 f~~~~l~~~G~y~f~ 111 (125)
T 3fsa_A 97 FDVSKLKEGEQYMFF 111 (125)
T ss_dssp EEGGGC---CCEEEE
T ss_pred EeCcCcCCCccEEEE
Confidence 99872 136888764
|
| >1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A | Back alignment and structure |
|---|
Probab=95.11 E-value=0.047 Score=45.51 Aligned_cols=69 Identities=22% Similarity=0.212 Sum_probs=46.8
Q ss_pred ceEEEecCCCeEEEEEEe--cCcceEEEEEEeCceeEEEEeC----------------Ccccc-----eeeEeeEEecCC
Q 012467 115 PQILHVQPNKTYRLRIAS--TTALASLNLAVKNHKMVVVEAD----------------GNYVQ-----PFEVDDMDIYSG 171 (463)
Q Consensus 115 ~~~~~v~~g~~~RlRliN--a~~~~~~~~~i~~h~~~via~D----------------G~~v~-----P~~~~~l~i~~G 171 (463)
+..|+|++|++++|++.| .+. . .|.|.+...+ ..++. ....++..|.+|
T Consensus 32 P~~i~v~~G~tV~~~~~N~~~~~-~-------~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG 103 (140)
T 1qhq_A 32 QTSLSLPANTVVRLDFVNQNNLG-V-------QHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAG 103 (140)
T ss_dssp CSEEEEETTCEEEEEEEECCSSC-C-------CBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTT
T ss_pred CCeEEECCCCEEEEEEECCCCCC-C-------ceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCC
Confidence 457999999999999999 332 2 3444444211 12221 123456789999
Q ss_pred ceEEEEEecCCCCCCceEEEEE
Q 012467 172 ESYSVLLTTNQDPSYNYWISAG 193 (463)
Q Consensus 172 eR~dvlV~~~~~~~g~y~ir~~ 193 (463)
++.++.+++++ +|.|++.=.
T Consensus 104 ~~~~~~~~~~~--~G~y~f~C~ 123 (140)
T 1qhq_A 104 ESGSVTFRTPA--PGTYLYICT 123 (140)
T ss_dssp EEEEEEEECCS--SEEEEEECC
T ss_pred ceeEEEEEeCC--CeeEEEEeC
Confidence 99999999975 689987543
|
| >1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A | Back alignment and structure |
|---|
Probab=94.98 E-value=0.024 Score=46.70 Aligned_cols=78 Identities=14% Similarity=0.129 Sum_probs=46.1
Q ss_pred CceEEEecCC-CeEEEEEEecCcce----EEEEEEeCce-eEEEEeC-------Ccccc---ee-eEeeEEecCCceEEE
Q 012467 114 APQILHVQPN-KTYRLRIASTTALA----SLNLAVKNHK-MVVVEAD-------GNYVQ---PF-EVDDMDIYSGESYSV 176 (463)
Q Consensus 114 ~~~~~~v~~g-~~~RlRliNa~~~~----~~~~~i~~h~-~~via~D-------G~~v~---P~-~~~~l~i~~GeR~dv 176 (463)
.+..|+|++| ++++|.|.|.+... .+.|.|.... +.-++.| -.++. +. ...+..|.|||++++
T Consensus 16 ~p~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~sv 95 (129)
T 1cuo_A 16 STRSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKTSV 95 (129)
T ss_dssp SCSEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEEEE
T ss_pred ccCeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEEEE
Confidence 3458999999 99999999998532 3333333221 0000000 01221 11 123346899999999
Q ss_pred EEecCC-CCCCceEEE
Q 012467 177 LLTTNQ-DPSYNYWIS 191 (463)
Q Consensus 177 lV~~~~-~~~g~y~ir 191 (463)
.++++. ..+|+|+..
T Consensus 96 tf~~~~~~~~G~Y~f~ 111 (129)
T 1cuo_A 96 KFKVSALSKDEAYTYF 111 (129)
T ss_dssp EEEGGGCCTTSCEEEE
T ss_pred EEeccccCCCceEEEE
Confidence 999861 036899874
|
| >1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=94.96 E-value=0.016 Score=47.44 Aligned_cols=31 Identities=16% Similarity=0.129 Sum_probs=25.3
Q ss_pred ccccccceeEEEeccchhhhhcceeeEEEEeCC
Q 012467 3 DVWQVQAGTYFYHGHLGMQRSAGLYGSLIVDVA 35 (463)
Q Consensus 3 ~~~~~~~GT~WYHsH~~~q~~~Gl~G~lIV~~~ 35 (463)
++....+|+|||+|- .+...||.|.|+|.++
T Consensus 65 ~~tF~~~G~y~y~C~--~H~~~gM~G~I~V~~~ 95 (123)
T 1pmy_A 65 VVKFDKEGVYGFKCA--PHYMMGMVALVVVGDK 95 (123)
T ss_dssp EEECCSCEEEEEECS--TTTTTTCEEEEEESSC
T ss_pred EEEeCCCeEEEEEeC--CccccCCEEEEEEcCC
Confidence 445568999999996 4666799999999864
|
| >2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C* | Back alignment and structure |
|---|
Probab=94.93 E-value=0.067 Score=43.91 Aligned_cols=43 Identities=26% Similarity=0.357 Sum_probs=36.8
Q ss_pred cceEEeCCCcEEEEEEEcC--Cce-eeeecccchHhHHccceeeeec
Q 012467 392 KNTAVIFPYGWTALRFVAD--NPG-AWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 392 rDTv~v~~~g~~~irf~ad--npG-~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
..|..|.||+...|.|.+. .|| .+-|.|-+--|.. ||-+.+.+
T Consensus 81 ~~t~~l~pGes~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V 126 (128)
T 2iaa_C 81 AHTSVIGGGETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIEL 126 (128)
T ss_dssp EECCCBCTTCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEE
T ss_pred ccceeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEE
Confidence 3456789999999999998 899 4999999999988 99888765
|
| >1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A | Back alignment and structure |
|---|
Probab=94.75 E-value=0.096 Score=42.98 Aligned_cols=94 Identities=16% Similarity=0.227 Sum_probs=57.7
Q ss_pred EEc-cCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCC------CCccccccCCCC---CC-CccceEEeCC
Q 012467 331 YML-GLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGK------FTKEDEKKFNLK---NP-PLKNTAVIFP 399 (463)
Q Consensus 331 ~~~-~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~------~~~~~~~~~n~~---~p-~~rDTv~v~~ 399 (463)
+.+ +.|+.|.+++.|.+.. . ---=+|.|-+...+.-. .... ..-++. ++ ....|-.|.|
T Consensus 20 i~V~k~G~~vtv~~~N~g~~------p--~~~m~H~~vi~~~~~~~~~~~~~m~~~--~~~~~~~~~~~~~~~~t~~l~p 89 (128)
T 1nwp_A 20 IAIDKSCKTFTVELTHSGSL------P--KNVMGHNLVISKEADMQPIATDGLSAG--IDKQYLKDGDARVIAHTKVIGA 89 (128)
T ss_dssp EEECTTCSEEEEEEEECSSC------C--HHHHCBCCEEEEGGGHHHHHHHHTTTC--GGGTTSCTTCTTEEEECCCBCT
T ss_pred EEEecCCCEEEEEEEECCCC------c--ccCCCceEEEccccchhhHHHHHhhcc--ccccccccccchhheeeeeeCC
Confidence 889 8999999999998753 2 00002234333221000 0000 000000 00 1234556899
Q ss_pred CcEEEEEEEcC--Ccee-eeecccchHhHHccceeeeec
Q 012467 400 YGWTALRFVAD--NPGA-WAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 400 ~g~~~irf~ad--npG~-w~~HCHi~~H~~~GM~~~~~~ 435 (463)
|+...|.|.+. .||. +-|.|-+--|.. ||-+.+.+
T Consensus 90 Get~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V 127 (128)
T 1nwp_A 90 GEKDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTL 127 (128)
T ss_dssp TCEEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEE
T ss_pred CCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEE
Confidence 99999999998 7876 999999988988 89887754
|
| >2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A | Back alignment and structure |
|---|
Probab=94.66 E-value=0.052 Score=44.19 Aligned_cols=71 Identities=18% Similarity=0.178 Sum_probs=45.2
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.+.++.|++|.|+ |.+. .|-+++.. +.+... ...+.+.+|+...+.|
T Consensus 22 ~i~V~~GdtV~f~--n~d~-------~H~v~~~~----------~~~p~~------------~~~~~~~~g~t~~~tF-- 68 (122)
T 2ux6_A 22 SLKVAPGDTVTFI--PTDK-------GHNVETIK----------GMIPDG------------AEAFKSKINENYKVTF-- 68 (122)
T ss_dssp EEEECTTEEEEEE--ESSS-------SCCCEECT----------TCSCTT------------CCCCBCCTTCCEEEEE--
T ss_pred EEEECCCCEEEEE--ECCC-------CcEEEEcc----------cccCCC------------cceeecCCCCEEEEEe--
Confidence 4899999999886 4431 46666553 111100 0011234677766666
Q ss_pred CCceeeeecccchHhHHccceeeeeccc
Q 012467 410 DNPGAWAFHCHIEPHFHIGMGVVLALGV 437 (463)
Q Consensus 410 dnpG~w~~HCHi~~H~~~GM~~~~~~~~ 437 (463)
+.||.|.|+|-+ |.. |.+.+.+.+
T Consensus 69 ~~~G~y~y~C~~--H~~--M~G~I~V~~ 92 (122)
T 2ux6_A 69 TAPGVYGVKCTP--HPF--MVGVVQVGD 92 (122)
T ss_dssp CSCEEEEEEETT--EEE--EEEEEEESS
T ss_pred CCCEEEEEEeCC--Ccc--CEEEEEEeC
Confidence 799999999987 766 888886653
|
| >3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ... | Back alignment and structure |
|---|
Probab=94.55 E-value=0.12 Score=41.99 Aligned_cols=91 Identities=15% Similarity=0.235 Sum_probs=57.5
Q ss_pred EEccC-CCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCc---c---ccccCCC----CCCCccceEEeCC
Q 012467 331 YMLGL-NTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTK---E---DEKKFNL----KNPPLKNTAVIFP 399 (463)
Q Consensus 331 ~~~~~-g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~---~---~~~~~n~----~~p~~rDTv~v~~ 399 (463)
+.++. |+.|+++|.|.+.+ |--.=||.|-+...+ .... + ....-++ .....-.|..|.+
T Consensus 20 i~V~~~Ge~V~~~l~N~G~~--------p~~~M~Hn~Vl~~~~--~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~p 89 (125)
T 3fsa_A 20 ITVDKSCKQFTVNLSHPGNL--------PKNVMGHNWVLSTAA--DMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGS 89 (125)
T ss_dssp EEECTTCSEEEEEEECCSSC--------CHHHHCBCCEEEEHH--HHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCT
T ss_pred EEEecCCCEEEEEEEECCcc--------cccccCceEEEcccc--hHHHHHHHHHhcChhhccCCCCCccceeccceeCC
Confidence 88876 99999999998854 111114566444221 1100 0 0000111 1124456778999
Q ss_pred CcEEEEEEEcC---CceeeeecccchHhHHccceeeeec
Q 012467 400 YGWTALRFVAD---NPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 400 ~g~~~irf~ad---npG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
|+...|.|.+. .+|.+-|-|- -|. ||-+.+.+
T Consensus 90 Ges~~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V 124 (125)
T 3fsa_A 90 GEKDSVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTL 124 (125)
T ss_dssp TCEEEEEEEGGGC---CCEEEECS--SST--TCEEEEEE
T ss_pred CcEEEEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEE
Confidence 99999999988 8999999999 888 99887754
|
| >3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ... | Back alignment and structure |
|---|
Probab=93.96 E-value=0.18 Score=43.30 Aligned_cols=71 Identities=15% Similarity=0.320 Sum_probs=52.6
Q ss_pred EEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcC
Q 012467 331 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 410 (463)
Q Consensus 331 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~ad 410 (463)
+.++.|+.|+|.+.|.+. .|.|.+=+... -+.+.||....+.|.++
T Consensus 95 l~VP~G~~Vr~~vTS~DV-------iHsf~IP~lgi---------------------------k~da~PG~~n~~~~~~~ 140 (168)
T 3s8f_B 95 IEVPQGAEIVFKITSPDV-------IHGFHVEGTNI---------------------------NVEVLPGEVSTVRYTFK 140 (168)
T ss_dssp EEEETTSEEEEEEECSSS-------CEEEEETTSSC---------------------------EEEECTTBCEEEEEECC
T ss_pred EEEeCCCeEEEEEecCCc-------eEEEEECCCCe---------------------------EEEecCCceeEEEEEeC
Confidence 889999999999999764 46544432211 13455788888999999
Q ss_pred Cceeeeecccc-hHhHHccceeeeec
Q 012467 411 NPGAWAFHCHI-EPHFHIGMGVVLAL 435 (463)
Q Consensus 411 npG~w~~HCHi-~~H~~~GM~~~~~~ 435 (463)
.||.+.+.|.. .-+...+|...+.+
T Consensus 141 kpG~y~g~Cse~CG~~Hs~M~g~V~V 166 (168)
T 3s8f_B 141 RPGEYRIICNQYCGLGHQNMFGTIVV 166 (168)
T ss_dssp SCEEEEEECCSCCSTTGGGCEEEEEE
T ss_pred CCEEEEEECCcCCCCCcCCCEEEEEE
Confidence 99999999984 55556788777654
|
| >2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A | Back alignment and structure |
|---|
Probab=93.50 E-value=0.068 Score=45.44 Aligned_cols=74 Identities=8% Similarity=0.007 Sum_probs=42.4
Q ss_pred eEEEecCCCeEEEEEEecCcceEEEEEEeCc--eeEEEEeCCcccceeeEeeEEecCCc--eEEEEEecCCCCCCceEEE
Q 012467 116 QILHVQPNKTYRLRIASTTALASLNLAVKNH--KMVVVEADGNYVQPFEVDDMDIYSGE--SYSVLLTTNQDPSYNYWIS 191 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h--~~~via~DG~~v~P~~~~~l~i~~Ge--R~dvlV~~~~~~~g~y~ir 191 (463)
+.|+|++|++++|++.|.+....+.|.|... .+.....+ ..+.+..-....|.||| ..++.+++ + +|.||..
T Consensus 61 p~i~V~~GD~V~~~~tN~~~~~~H~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~i~PG~sgt~t~tft~-~--pGtY~y~ 136 (154)
T 2cal_A 61 PTLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVI-DPIVAGTGFSPVPKDGKFGYTDFTWHP-T--AGTYYYV 136 (154)
T ss_dssp CEEEECTTCEEEEEEEECCTTCCCCCEEESCCSCCCSSCCC-CSEEEEBCCCCCCBTTBEEEEEEEECC-C--SEEEEEE
T ss_pred CEEEEeCCCEEEEEEEcCCCCeeeEEEEeecCcchhccccc-cccccccccccccCCCCceEEEEEEEE-C--CceEEEE
Confidence 4899999999999999975333444444321 11000000 00111000112679999 77777777 5 6999986
Q ss_pred EE
Q 012467 192 AG 193 (463)
Q Consensus 192 ~~ 193 (463)
-.
T Consensus 137 C~ 138 (154)
T 2cal_A 137 CQ 138 (154)
T ss_dssp CC
T ss_pred CC
Confidence 43
|
| >2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A | Back alignment and structure |
|---|
Probab=93.32 E-value=0.022 Score=44.91 Aligned_cols=71 Identities=14% Similarity=0.237 Sum_probs=40.6
Q ss_pred ceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEE
Q 012467 115 PQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWIS 191 (463)
Q Consensus 115 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir 191 (463)
|..|+|++|++++|+ |.+.. .+.|.+.+..+.. .+|..-.....+.+.+.|||++++.++++. .+|.|++.
T Consensus 19 P~~i~v~~Gd~V~~~--n~~~~-~H~~~~~~~~~~~--~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~-~~G~y~y~ 89 (106)
T 2gim_A 19 PAKLTIKPGDTVEFL--NNKVP-PHNVVFDAALNPA--KSADLAKSLSHKQLLMSPGQSTSTTFPADA-PAGEYTFY 89 (106)
T ss_dssp SSEEEECTTCEEEEE--ECSSS-CCCBEECSSSSTT--CCHHHHHHHCBCSCCCSTTCEEEEECCTTC-CSEEEEEE
T ss_pred CCEEEECCCCEEEEE--ECCCC-CceEEEeCCCCcc--cccccchhccccceeeCCCCEEEEEEecCC-CCceEEEE
Confidence 458999999988775 77632 2333333221100 011110111135678999999999766533 47999876
|
| >2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=92.32 E-value=0.36 Score=37.07 Aligned_cols=66 Identities=20% Similarity=0.306 Sum_probs=40.3
Q ss_pred ceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEE
Q 012467 115 PQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWIS 191 (463)
Q Consensus 115 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir 191 (463)
|..|+|++|++++| .|.+. ..+.|.+.+..+ -+|..-.....+.+.+.||+++.+ ++++ +|.|++.
T Consensus 17 P~~i~v~~G~~V~~--~n~~~-~~H~~~~~~~~~----p~~~~~~~~~~~~~~~~pG~~~~~--tf~~--~G~y~y~ 82 (98)
T 2plt_A 17 PKTLTIKSGETVNF--VNNAG-FPHNIVFDEDAI----PSGVNADAISRDDYLNAPGETYSV--KLTA--AGEYGYY 82 (98)
T ss_dssp SSEEEECTTCEEEE--EECSS-CCEEEEECGGGS----CTTCCHHHHCEEEEECSTTCEEEE--ECCS--CEEEEEE
T ss_pred CCEEEECCCCEEEE--EECCC-CceEEEEeCCCC----CCccccccccccceecCCCCEEEE--EeCC--CeEEEEE
Confidence 45799999998876 68763 345555544211 011111111245688999999988 4443 6899875
|
| >1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A | Back alignment and structure |
|---|
Probab=91.85 E-value=0.29 Score=37.63 Aligned_cols=66 Identities=11% Similarity=0.189 Sum_probs=39.6
Q ss_pred ceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEE
Q 012467 115 PQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA 192 (463)
Q Consensus 115 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~ 192 (463)
|..|+|++|++++|+ |.+. ..+.+.+.+.... |..-.....+.+.+.||+.+.+ +++ .+|.|++.=
T Consensus 18 P~~i~v~~G~~V~~~--n~~~-~~H~~~~~~~~~p-----g~~~~~~~~~~~~~~pG~~~~~--tf~--~~G~y~~~C 83 (98)
T 1pcs_A 18 PSTVTIKAGEEVKWV--NNKL-SPHNIVFDADGVP-----ADTAAKLSHKGLLFAAGESFTS--TFT--EPGTYTYYC 83 (98)
T ss_dssp SSEEEECTTCEEEEE--ECSS-CCEEEEECCSSSC-----HHHHHHHCEEEEECSTTCEEEE--ECC--SCEEEEEEC
T ss_pred CCEEEECCCCEEEEE--ECCC-CCcEEEEeCCCCC-----ccccccccccccccCCCCEEEE--EcC--CCeEEEEEc
Confidence 457999999998876 7653 2344444432110 0000011245788999999887 444 368998753
|
| >1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A | Back alignment and structure |
|---|
Probab=91.43 E-value=0.17 Score=39.34 Aligned_cols=64 Identities=13% Similarity=0.161 Sum_probs=40.2
Q ss_pred CceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcc-------cce-eeEeeEEecCCceEEEEEecCCCCC
Q 012467 114 APQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNY-------VQP-FEVDDMDIYSGESYSVLLTTNQDPS 185 (463)
Q Consensus 114 ~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~-------v~P-~~~~~l~i~~GeR~dvlV~~~~~~~ 185 (463)
.|..|+|++|++++|+ |.+.. .|.+.+..-+|.. ..| ...+.+.+.|||++.+ +++ .+
T Consensus 15 ~P~~i~v~~G~tV~~~--n~~~~--------~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~--tf~--~~ 80 (102)
T 1kdj_A 15 YPDSITVSAGEAVEFT--LVGET--------GHNIVFDIPAGAPGTVASELKAASMDENDLLSEDEPSFKA--KVS--TP 80 (102)
T ss_dssp ESSEEEECTTCCEEEE--ECSSS--------CBCCEECCCTTCCHHHHHHHHHTSCCTTCCBBTTBCEEEE--CCC--SC
T ss_pred eCCEEEECCCCEEEEE--ECCCC--------CeEEEEeCcccccccccchhhcccccccceecCCCCEEEE--EeC--CC
Confidence 3457999999998875 77632 3565554333421 001 1124577899999888 454 46
Q ss_pred CceEEE
Q 012467 186 YNYWIS 191 (463)
Q Consensus 186 g~y~ir 191 (463)
|.|++.
T Consensus 81 G~y~y~ 86 (102)
T 1kdj_A 81 GTYTFY 86 (102)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 899875
|
| >1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A* | Back alignment and structure |
|---|
Probab=90.80 E-value=0.53 Score=36.02 Aligned_cols=62 Identities=16% Similarity=0.203 Sum_probs=39.1
Q ss_pred ceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCccc--ceeeEeeEEecCCceEEEEEecCCCCCCceEEE
Q 012467 115 PQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYV--QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWIS 191 (463)
Q Consensus 115 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v--~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir 191 (463)
|..|+|++|++++|+ |.+.. .|.+.+.+.+. +. .....+.+.+.||+++++- ++ .+|.|++.
T Consensus 18 P~~i~v~~G~~V~~~--n~~~~--------~H~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~t--f~--~~G~y~y~ 81 (97)
T 1b3i_A 18 PKALSISAGDTVEFV--MNKVG--------PHNVIFDKVPA-GESAPALSNTKLAIAPGSFYSVT--LG--TPGTYSFY 81 (97)
T ss_dssp SSEEEECTTCEEEEE--ECSSC--------CCCBEEEECCT-TSCHHHHCBCCCCCSCSCCEEEE--CC--SCSEEEEE
T ss_pred CCEEEECCCCEEEEE--ECCCC--------CeEEEEeCCCC-ccccccccccceecCCCCEEEEE--eC--CCeEEEEE
Confidence 457999999987765 76531 36665544321 11 0111356788999999884 44 46899875
|
| >1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A | Back alignment and structure |
|---|
Probab=90.03 E-value=0.9 Score=34.87 Aligned_cols=67 Identities=13% Similarity=0.153 Sum_probs=38.5
Q ss_pred CceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEE
Q 012467 114 APQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWIS 191 (463)
Q Consensus 114 ~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir 191 (463)
.|..|+|++|++++|+ |.+. ..+.+.+....+ -+|........+.+.+.+|+++.+- ++ .+|.|++.
T Consensus 16 ~P~~i~v~~GdtV~~~--n~~~-~~H~v~~~~~~~----p~g~~~~~~~~~~~~~~~g~~~~~t--f~--~~G~y~y~ 82 (98)
T 1iuz_A 16 VPSKISVAAGEAIEFV--NNAG-FPHNIVFDEDAV----PAGVDADAISYDDYLNSKGETVVRK--LS--TPGVYGVY 82 (98)
T ss_dssp ESSEEEECTTCEEEEE--ECSS-CCEEEEECTTSS----CTTCCHHHHCEEEEECSTTCEEEEE--CC--SCEEEEEE
T ss_pred eCCEEEECCCCEEEEE--ECCC-CCEEEEEeCCCC----ccccccccccccccccCCCCEEEEE--cC--CCEEEEEE
Confidence 3458999999988775 7653 233333332100 0111111112345789999998884 44 36899874
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=89.60 E-value=0.96 Score=46.85 Aligned_cols=62 Identities=13% Similarity=0.170 Sum_probs=47.6
Q ss_pred CceEEEecCCCeEEEEEEecCc--ceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEE
Q 012467 114 APQILHVQPNKTYRLRIASTTA--LASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWIS 191 (463)
Q Consensus 114 ~~~~~~v~~g~~~RlRliNa~~--~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir 191 (463)
.++.|+|++|++++|++.|... ...+.|.+.++.+. ..+.||+..++.+++++ +|.||..
T Consensus 511 ~pp~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv~----------------~~i~PG~t~t~~Fta~~--pGtY~yh 572 (595)
T 1fwx_A 511 SIESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGVA----------------MEIGPQMTSSVTFVAAN--PGVYWYY 572 (595)
T ss_dssp SCSEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE----------------EEECTTCEEEEEEECCS--CEEEEEE
T ss_pred cCCEEEEECCCEEEEEEEeCCCCCCceeeEEecCCCcc----------------eeeCCCCeEEEEEECCC--CEEEEEE
Confidence 4568999999999999999643 23466666654321 57899999999999975 7999986
Q ss_pred EE
Q 012467 192 AG 193 (463)
Q Consensus 192 ~~ 193 (463)
-.
T Consensus 573 C~ 574 (595)
T 1fwx_A 573 CQ 574 (595)
T ss_dssp CC
T ss_pred CC
Confidence 43
|
| >3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=89.39 E-value=5.2 Score=32.01 Aligned_cols=76 Identities=13% Similarity=0.264 Sum_probs=51.9
Q ss_pred CCCeE--EEEEEecCcceEEEEEEe-Cce--eEEEEeCCcccc--------eeeEeeEEecCCceEEEEEecCC-CCCCc
Q 012467 122 PNKTY--RLRIASTTALASLNLAVK-NHK--MVVVEADGNYVQ--------PFEVDDMDIYSGESYSVLLTTNQ-DPSYN 187 (463)
Q Consensus 122 ~g~~~--RlRliNa~~~~~~~~~i~-~h~--~~via~DG~~v~--------P~~~~~l~i~~GeR~dvlV~~~~-~~~g~ 187 (463)
.|+.+ .|.+.|.+. ....|.+. |.+ |.|...+|..|- +.......|.|||...+-++.++ ..+|.
T Consensus 16 ~g~~v~~~ltv~N~s~-~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~ 94 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSE-RAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGT 94 (120)
T ss_dssp CSSCEEEEEEEEECSS-SCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEE
T ss_pred CCCeEEEEEEEEcCCC-CcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCcc
Confidence 44454 677888884 44555553 444 444444576662 34567899999999999999985 35799
Q ss_pred eEEEEEecCCC
Q 012467 188 YWISAGVRGRK 198 (463)
Q Consensus 188 y~ir~~~~~~~ 198 (463)
|.+.+......
T Consensus 95 Ytl~a~l~~~~ 105 (120)
T 3isy_A 95 YEVKVTFKGRA 105 (120)
T ss_dssp EEEEEEECCEE
T ss_pred EEEEEEEEeee
Confidence 99998765543
|
| >2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A | Back alignment and structure |
|---|
Probab=87.90 E-value=0.25 Score=40.06 Aligned_cols=29 Identities=21% Similarity=0.114 Sum_probs=22.1
Q ss_pred ccccccceeEEEeccchhhhhcceeeEEEEeCC
Q 012467 3 DVWQVQAGTYFYHGHLGMQRSAGLYGSLIVDVA 35 (463)
Q Consensus 3 ~~~~~~~GT~WYHsH~~~q~~~Gl~G~lIV~~~ 35 (463)
++...++|+|||+|-. +.. |.|.|+|.++
T Consensus 65 ~~tF~~~G~y~y~C~~--H~~--M~G~I~V~~~ 93 (122)
T 2ux6_A 65 KVTFTAPGVYGVKCTP--HPF--MVGVVQVGDA 93 (122)
T ss_dssp EEEECSCEEEEEEETT--EEE--EEEEEEESSS
T ss_pred EEEeCCCEEEEEEeCC--Ccc--CEEEEEEeCC
Confidence 3444689999999975 222 9999999874
|
| >2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ... | Back alignment and structure |
|---|
Probab=87.10 E-value=0.97 Score=35.26 Aligned_cols=61 Identities=16% Similarity=0.150 Sum_probs=37.0
Q ss_pred ceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEE
Q 012467 115 PQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA 192 (463)
Q Consensus 115 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~ 192 (463)
|..|+|++|++++| +|... ..+.+.+.+ ..||.. ..+.-.|.+|+++.+-+ + .+|.|++.-
T Consensus 32 P~~i~v~~Gd~V~~--~N~d~-~~H~v~~~~------~~~g~~----~~~~~~~~pG~~~~~tf--~--~~G~y~y~C 92 (105)
T 2ov0_A 32 TPELHVKVGDTVTW--INREA-MPHNVHFVA------GVLGEA----ALKGPMMKKEQAYSLTF--T--EAGTYDYHC 92 (105)
T ss_dssp SSEEEECTTCEEEE--EECSS-SCBCCEECT------TTSSSS----CEECCCBCTTEEEEEEE--C--SCEEEEEEC
T ss_pred CCEEEECCCCEEEE--EECCC-CCEEEEEcC------CCCCcc----cccccccCCCCEEEEEe--C--CCEEEEEEe
Confidence 45899999999877 48764 223333322 113321 12233478999988755 4 368998863
|
| >1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A | Back alignment and structure |
|---|
Probab=81.69 E-value=1.3 Score=33.86 Aligned_cols=67 Identities=13% Similarity=0.264 Sum_probs=37.6
Q ss_pred CceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccc--eeeEeeEEecCCceEEEEEecCCCCCCceEEE
Q 012467 114 APQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQ--PFEVDDMDIYSGESYSVLLTTNQDPSYNYWIS 191 (463)
Q Consensus 114 ~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~--P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir 191 (463)
.|..|+|++|++++| .|.+. ..+.+.+.+..+ -||.... ....+.+.+.|||.+.+- +++ +|.|++.
T Consensus 15 ~P~~i~v~~G~tV~~--~n~~~-~~H~v~~~~~~~----p~~~~~~~~~~~~~~~~~~~G~~~~~t--f~~--~G~y~~~ 83 (99)
T 1plc_A 15 VPSEFSISPGEKIVF--KNNAG-FPHNIVFDEDSI----PSGVDASKISMSEEDLLNAKGETFEVA--LSN--KGEYSFY 83 (99)
T ss_dssp ESSEEEECTTCEEEE--EECSS-CCBCCEECTTSS----CTTCCHHHHCCCTTCCBCSTTCEEEEE--CCS--CEEEEEE
T ss_pred eCCEEEECCCCEEEE--EECCC-CceEEEEeCCCC----cccccccccccccCccccCCCCEEEEE--ECC--CceEEEE
Confidence 345899999998877 67763 223333332111 0221100 011233678999998884 443 6899875
|
| >1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A | Back alignment and structure |
|---|
Probab=81.30 E-value=0.96 Score=34.66 Aligned_cols=63 Identities=21% Similarity=0.294 Sum_probs=37.2
Q ss_pred ceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEe---CCcccc--eeeEeeEEecCCceEEEEEecCCCCCCceE
Q 012467 115 PQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEA---DGNYVQ--PFEVDDMDIYSGESYSVLLTTNQDPSYNYW 189 (463)
Q Consensus 115 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~---DG~~v~--P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ 189 (463)
|..|+|++|++++| .|.+.. .|.+.+... ||.... ....+.+.+.+||.+.+-+ ++ +|.|+
T Consensus 16 P~~i~v~~G~tV~~--~n~~~~--------~H~~~~~~~~~p~g~~~~~~~~~~~~~~~~~G~~~~~~f--~~--~G~y~ 81 (99)
T 1byp_A 16 PSDLSIASGEKITF--KNNAGF--------PHNDLFDKKEVPAGVDVTKISMPEEDLLNAPGEEYSVTL--TE--KGTYK 81 (99)
T ss_dssp SSEEEECTTEEEEE--EECSSC--------CBCCEECTTSSCTTCCHHHHSCCTTCCBCSTTCEEEEEE--CS--CEEEE
T ss_pred CCEEEECCCCEEEE--EECCCC--------cceEEEeCCCCccccccccccccccceeeCCCCEEEEEe--CC--CcEEE
Confidence 45799999998776 677632 244433221 222110 0112346789999988855 43 68887
Q ss_pred EE
Q 012467 190 IS 191 (463)
Q Consensus 190 ir 191 (463)
+.
T Consensus 82 ~~ 83 (99)
T 1byp_A 82 FY 83 (99)
T ss_dssp EE
T ss_pred EE
Confidence 75
|
| >2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B* | Back alignment and structure |
|---|
Probab=80.69 E-value=5 Score=32.89 Aligned_cols=55 Identities=18% Similarity=0.285 Sum_probs=40.6
Q ss_pred EEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEE
Q 012467 117 ILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWIS 191 (463)
Q Consensus 117 ~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir 191 (463)
.+.|+.|+++||++-|.. ..+.|.|.+..+ .+.+.||+.-.+.+++++ +|.|...
T Consensus 61 ~l~Vp~G~~V~~~vts~D--V~Hsf~ip~~~~----------------k~d~~PG~~~~~~~~~~~--~G~y~~~ 115 (135)
T 2cua_A 61 PIEVPQGAEIVFKITSPD--VIHGFHVEGTNI----------------NVEVLPGEVSTVRYTFKR--PGEYRII 115 (135)
T ss_dssp SEEEETTSEEEEEEEBSS--SCEEEEETTSSC----------------EEEECBTBCEEEEEECCS--CEEEEEE
T ss_pred EEEEcCCCEEEEEEEeCC--ccceEEecCCCc----------------eeEeCCCCcEEEEEEcCC--CEEEEEE
Confidence 689999999999988865 345555554432 245678988888888886 6899875
|
| >3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A | Back alignment and structure |
|---|
Probab=80.55 E-value=5.4 Score=40.92 Aligned_cols=60 Identities=18% Similarity=0.244 Sum_probs=46.4
Q ss_pred CceEEEecCCCeEEEEEEecCc--ceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEE
Q 012467 114 APQILHVQPNKTYRLRIASTTA--LASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWIS 191 (463)
Q Consensus 114 ~~~~~~v~~g~~~RlRliNa~~--~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir 191 (463)
.+..|.|+.|+++||.+-|... .-.+.|.|.+..+. +.+.||+...+.+++++ +|.|+..
T Consensus 556 sP~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGIK----------------~DaiPGrtnsvtFtadk--PGvY~y~ 617 (638)
T 3sbq_A 556 GVQEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGVS----------------MEISPQQTSSITFVADK--PGLHWYY 617 (638)
T ss_dssp SCCEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE----------------EEECTTCEEEEEEECCS--CEEEEEE
T ss_pred cCCEEEEecCceeEEEEecCCcCCCceeeeEecCCCce----------------eeeCCCCeEEEEEEcCC--CEEEEEE
Confidence 3457999999999999999742 45677777665432 36889999999999986 6999875
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 463 | ||||
| d1aoza3 | 214 | b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (C | 2e-70 | |
| d1aoza2 | 209 | b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (C | 2e-64 | |
| d1v10a2 | 168 | b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus | 6e-30 | |
| d1hfua2 | 172 | b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Copr | 8e-28 | |
| d2q9oa2 | 181 | b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyce | 2e-27 | |
| d2q9oa3 | 216 | b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyce | 3e-26 | |
| d1gyca3 | 199 | b.6.1.3 (A:301-499) Laccase {Trametes versicolor, | 3e-25 | |
| d1hfua3 | 200 | b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Copr | 7e-25 | |
| d1gyca2 | 170 | b.6.1.3 (A:131-300) Laccase {Trametes versicolor, | 2e-24 | |
| d1v10a3 | 190 | b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus | 3e-21 | |
| d1gska3 | 154 | b.6.1.3 (A:357-510) Spore coat protein A, CotA {Ba | 1e-20 | |
| d1kv7a3 | 181 | b.6.1.3 (A:336-516) multi-copper oxidase CueO {Esc | 4e-17 | |
| d1kv7a2 | 165 | b.6.1.3 (A:171-335) multi-copper oxidase CueO {Esc | 1e-13 | |
| d1sddb2 | 139 | b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (B | 2e-12 | |
| d1sddb2 | 139 | b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (B | 0.002 | |
| d2j5wa5 | 149 | b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sa | 3e-11 | |
| d1sdda2 | 116 | b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos | 6e-09 | |
| d1gska2 | 174 | b.6.1.3 (A:183-356) Spore coat protein A, CotA {Ba | 6e-09 | |
| d2j5wa2 | 145 | b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sap | 2e-08 | |
| d2j5wa2 | 145 | b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sap | 8e-04 | |
| d1qhqa_ | 139 | b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus | 4e-07 | |
| d1kcwa2 | 146 | b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sap | 7e-07 | |
| d1kcwa2 | 146 | b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sap | 0.001 | |
| d1aoza1 | 129 | b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cuc | 1e-06 | |
| d2q9oa1 | 162 | b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces | 5e-06 | |
| d2bw4a2 | 173 | b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcali | 6e-06 | |
| d1kbva2 | 151 | b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisse | 1e-05 | |
| d1e30a_ | 153 | b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidan | 2e-05 | |
| d1e30a_ | 153 | b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidan | 1e-04 | |
| d1gyca1 | 130 | b.6.1.3 (A:1-130) Laccase {Trametes versicolor, la | 2e-05 | |
| d1hfua1 | 131 | b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprin | 3e-05 | |
| d1oe1a2 | 177 | b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcali | 9e-05 | |
| d1v10a1 | 136 | b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [T | 9e-05 | |
| d1oe2a1 | 159 | b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcalige | 1e-04 | |
| d1oe2a1 | 159 | b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcalige | 0.003 | |
| d2j5wa1 | 192 | b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapie | 1e-04 | |
| d1kv7a1 | 140 | b.6.1.3 (A:31-170) multi-copper oxidase CueO {Esch | 5e-04 | |
| d1kbva1 | 151 | b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisser | 9e-04 | |
| d1kbva1 | 151 | b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisser | 0.001 |
| >d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 214 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Score = 220 bits (562), Expect = 2e-70
Identities = 145/213 (68%), Positives = 166/213 (77%), Gaps = 1/213 (0%)
Query: 251 PPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFS 310
PP F+RR+ LLNTQN ING+ KWAIN+VSL LPPTPYLG++KY L AFDQN PPE F
Sbjct: 1 PPVKFNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFP 60
Query: 311 NEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLG 370
+YD+ PP N T +G+GVY + VDVILQNAN ++ NLSE HPWHLHGHDFWVLG
Sbjct: 61 EDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLG 120
Query: 371 RGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMG 430
G+GKF+ E+E NLKNPPL+NT VIFPYGWTA+RFVADNPG WAFHCHIEPH H+GMG
Sbjct: 121 YGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMG 180
Query: 431 VVLALGVETVGNIPNQALACGLTGKRFM-NPKQ 462
VV A GVE VG IP +ALACG T K + NPK
Sbjct: 181 VVFAEGVEKVGRIPTKALACGGTAKSLINNPKN 213
|
| >d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 209 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Score = 204 bits (520), Expect = 2e-64
Identities = 147/210 (70%), Positives = 177/210 (84%), Gaps = 1/210 (0%)
Query: 41 PFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNG 100
PFHYDGE NLLLSDWWH+S+H+QEVGLSS+P+RWIGEPQT+L+NGRGQF+CS+AA + +
Sbjct: 1 PFHYDGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCSIAAKY-DS 59
Query: 101 SAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQP 160
+ E CKL+G+E CAP I HV P KTYR+RIASTTALA+LN A+ NH+++VVEADGNYVQP
Sbjct: 60 NLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEADGNYVQP 119
Query: 161 FEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPL 220
F D+DIYSGESYSVL+TT+Q+PS NYW+S G R R P TPP LTLLNY P S SK+P
Sbjct: 120 FYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTLLNYLPNSVSKLPT 179
Query: 221 SPPPITPRWDDYDHSKSFSNKIFALMGSPK 250
SPPP TP WDD+D SK+F+ +I A MGSPK
Sbjct: 180 SPPPQTPAWDDFDRSKNFTYRITAAMGSPK 209
|
| >d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 168 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Score = 112 bits (281), Expect = 6e-30
Identities = 47/184 (25%), Positives = 73/184 (39%), Gaps = 24/184 (13%)
Query: 45 DGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQ 104
D + ++DW+H L P + P T LING G+ +
Sbjct: 5 DASTVITIADWYHSLSTV----LFPNPNKAPPAPDTTLINGLGRNSA------------- 47
Query: 105 CKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVD 164
++ VQ K YR RI ST+ + ++ H+M V+E DG QP VD
Sbjct: 48 ----NPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQPLTVD 103
Query: 165 DMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTL--LNYHPTSASKIPLSP 222
+ I++G+ YSV++ NQ NYWI A + + Y + ++ S
Sbjct: 104 SLTIFAGQRYSVVVEANQAVG-NYWIRANPSNGRNGFTGGINSAIFRYQGAAVAEPTTSQ 162
Query: 223 PPIT 226
T
Sbjct: 163 NSGT 166
|
| >d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 172 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Score = 106 bits (266), Expect = 8e-28
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 34/188 (18%)
Query: 43 HYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSA 102
D + L+DW+H ++ +P LING+G++ AA S
Sbjct: 8 EDDENTIITLADWYHIPAPS---------IQGAAQPDATLINGKGRYVGGPAAELS---- 54
Query: 103 EQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFE 162
I++V+ K YR+R+ S + + ++ H++ ++E DG +P
Sbjct: 55 --------------IVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHT 100
Query: 163 VDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALT------LLNYHPTSAS 216
VD + I++G+ YS +L NQ NYWI A + +L Y + +
Sbjct: 101 VDRLQIFTGQRYSFVLDANQPVD-NYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANA 159
Query: 217 KIPLSPPP 224
S P
Sbjct: 160 DPTTSANP 167
|
| >d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 181 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Score = 106 bits (265), Expect = 2e-27
Identities = 36/190 (18%), Positives = 69/190 (36%), Gaps = 32/190 (16%)
Query: 50 LLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRG 109
++D+++R+ + + + +LING + ++N
Sbjct: 8 FPITDYYYRAADDLVHFTQNNAPPF---SDNVLINGTAVNPNTGEGQYAN---------- 54
Query: 110 NEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIY 169
+ + P K +RLRI +T+ +++ NH M V+ AD V VD + +
Sbjct: 55 --------VTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLA 106
Query: 170 SGESYSVLLTTNQDPSYNYWISAGVRGRKPA----TPPALTLLNYHPTSASKIPLSPPPI 225
G+ Y V++ ++ P NYW + G+ P + +Y P
Sbjct: 107 VGQRYDVVIDASRAPD-NYWFNVTFGGQAACGGSLNPHPAAIFHYAGAP------GGLPT 159
Query: 226 TPRWDDYDHS 235
DH
Sbjct: 160 DEGTPPVDHQ 169
|
| >d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 216 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Score = 103 bits (257), Expect = 3e-26
Identities = 51/210 (24%), Positives = 70/210 (33%), Gaps = 40/210 (19%)
Query: 251 PPTNFHRRLTL---LNTQNTINGFTKWAINNVSLTLPP-TPYLGSIKYGLKDAFDQNGPP 306
P +F +R + T W +N + + P + I G
Sbjct: 4 PVNSFVKRPDNTLPVALDLTGTPLFVWKVNGSDINVDWGKPIIDYILTG----------- 52
Query: 307 ENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDF 366
N + + + + L N S HP HLHGHDF
Sbjct: 53 --------------NTSYPVSDNIVQVDAVDQWTYWLIE-NDPEGPFSLPHPMHLHGHDF 97
Query: 367 WVLGRGEGKFT----------KEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWA 416
VLGR D + N NPP ++T ++ GW L F DNPGAW
Sbjct: 98 LVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWL 157
Query: 417 FHCHIEPHFHIGMGVVLALGVETVGNIPNQ 446
FHCHI H G+ V + +Q
Sbjct: 158 FHCHIAWHVSGGLSVDFLERPADLRQRISQ 187
|
| >d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 199 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Score = 100 bits (249), Expect = 3e-25
Identities = 55/203 (27%), Positives = 71/203 (34%), Gaps = 31/203 (15%)
Query: 243 FALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQ 302
A M P PT L N NG T + INN S T P P L I G + A D
Sbjct: 8 LARMPVPGSPTPGGVDKAL-NLAFNFNG-TNFFINNASFTPPTVPVLLQILSGAQTAQDL 65
Query: 303 NGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLH 362
VY L ++T+++ L HP+HLH
Sbjct: 66 LPAGS----------------------VYPLPAHSTIEITLPA---TALAPGAPHPFHLH 100
Query: 363 GHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIE 422
GH F V+ ++ F + +T +RF DNPG W HCHI+
Sbjct: 101 GHAFAVVRSAGSTTYNYNDPIF----RDVVSTGTPAAGDNVTIRFQTDNPGPWFLHCHID 156
Query: 423 PHFHIGMGVVLALGVETVGNIPN 445
H G +V A V V
Sbjct: 157 FHLEAGFAIVFAEDVADVKAANP 179
|
| >d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 200 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Score = 99.5 bits (247), Expect = 7e-25
Identities = 47/175 (26%), Positives = 66/175 (37%), Gaps = 35/175 (20%)
Query: 272 TKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVY 331
++ IN + P P L I G + A D VY
Sbjct: 35 GRFTINGTAYESPSVPTLLQIMSGAQSANDLLPAGS----------------------VY 72
Query: 332 MLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPL 391
L N V++++ P HP+HLHGH F V+ +N NP
Sbjct: 73 ELPRNQVVELVVPAGVLGGP-----HPFHLHGHAFSVVRSA-------GSSTYNFVNPVK 120
Query: 392 KNTAVIFPYG-WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPN 445
++ + G +RFV DNPG W FHCHIE H G+ +V A + + N
Sbjct: 121 RDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMANTVDANN 175
|
| >d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 170 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Score = 97.5 bits (242), Expect = 2e-24
Identities = 42/185 (22%), Positives = 69/185 (37%), Gaps = 30/185 (16%)
Query: 45 DGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQ 104
+ + L+DW+H + R+ LING G+
Sbjct: 11 NESTVITLTDWYHTAARLGP--------RFPLGADATLINGLGRSAS------------- 49
Query: 105 CKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVD 164
A +++VQ K YR R+ S + + ++ H + V+E DG QP VD
Sbjct: 50 -----TPTAALAVINVQHGKRYRFRLVSISCDPNYTFSIDGHNLTVIEVDGINSQPLLVD 104
Query: 165 DMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP--ATPPALTLLNYHPTSASKIPLSP 222
+ I++ + YS +L NQ NYWI A A +L Y ++ P +
Sbjct: 105 SIQIFAAQRYSFVLNANQTVG-NYWIRANPNFGTVGFAGGINSAILRYQGAPVAE-PTTT 162
Query: 223 PPITP 227
+
Sbjct: 163 QTTSV 167
|
| >d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 190 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Score = 88.8 bits (219), Expect = 3e-21
Identities = 48/212 (22%), Positives = 69/212 (32%), Gaps = 40/212 (18%)
Query: 248 SPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPE 307
P L L +N + IN P P L I G+ + D
Sbjct: 15 GNPVPGGADINLNLRIGRN--ATTADFTINGAPFIPPTVPVLLQILSGVTNPND------ 66
Query: 308 NFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFW 367
G V L N +++ + HP+HLHGH+F
Sbjct: 67 ----------------LLPGGAVISLPANQVIEISIPGGG--------NHPFHLHGHNFD 102
Query: 368 VLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWT-ALRFVADNPGAWAFHCHIEPHFH 426
V+ +N NP ++ I G RFV DNPG W HCHI+ H
Sbjct: 103 VVRTP-------GSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFLHCHIDWHLE 155
Query: 427 IGMGVVLALGVETVGNIPNQALACGLTGKRFM 458
G+ VV A + + + A ++
Sbjct: 156 AGLAVVFAEDIPNIPIANAISPAWDDLCPKYN 187
|
| >d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Length = 154 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Score = 85.9 bits (212), Expect = 1e-20
Identities = 22/106 (20%), Positives = 29/106 (27%), Gaps = 17/106 (16%)
Query: 335 LNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDE----------KKF 384
+ TT + N HP HLH F VL R + E
Sbjct: 47 VGTTEIWSIINPTR------GTHPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPP 100
Query: 385 NLKNPPLKNTAVIFPYGWTALRF-VADNPGAWAFHCHIEPHFHIGM 429
K+T + G + +HCHI H M
Sbjct: 101 PPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHILEHEDYDM 146
|
| >d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 181 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Score = 77.0 bits (189), Expect = 4e-17
Identities = 19/98 (19%), Positives = 31/98 (31%), Gaps = 16/98 (16%)
Query: 335 LNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNT 394
++ + HP+H+HG F +L K+T
Sbjct: 91 KGQYERWVISGVGDMML-----HPFHIHGTQFRILSENGKPPAAH--------RAGWKDT 137
Query: 395 AVIFPYGWT-ALRFVADNP--GAWAFHCHIEPHFHIGM 429
+ ++F D P A+ HCH+ H GM
Sbjct: 138 VKVEGNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGM 175
|
| >d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 165 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Score = 66.6 bits (162), Expect = 1e-13
Identities = 34/188 (18%), Positives = 62/188 (32%), Gaps = 35/188 (18%)
Query: 41 PFHYD-GEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSN 99
P + + +++ D + + + L TLL NG
Sbjct: 3 PKQWGIDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIYPQ--------- 53
Query: 100 GSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLA-VKNHKMVVVEADGNYV 158
H P RLR+ + SLN A N + V+ +DG +
Sbjct: 54 -------------------HAAPRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLL 94
Query: 159 -QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPA---LTLLNYHPTS 214
+P +V ++ + GE + VL+ N + + ++ V A P ++ P +
Sbjct: 95 PEPVKVSELPVLMGERFEVLVEVNDNKPF-DLVTLPVSQMGMAIAPFDKPHPVMRIQPIA 153
Query: 215 ASKIPLSP 222
S P
Sbjct: 154 ISASGALP 161
|
| >d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 139 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Score = 62.1 bits (150), Expect = 2e-12
Identities = 14/83 (16%), Positives = 18/83 (21%), Gaps = 16/83 (19%)
Query: 351 PNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 410
+IH H HG G + P + L A
Sbjct: 70 GGSRDIHVVHFHGQTLLENGTQ----------------QHQLGVWPLLPGSFKTLEMKAS 113
Query: 411 NPGAWAFHCHIEPHFHIGMGVVL 433
PG W + GM
Sbjct: 114 KPGWWLLDTEVGEIQRAGMQTPF 136
|
| >d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 139 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Score = 36.7 bits (84), Expect = 0.002
Identities = 4/30 (13%), Positives = 13/30 (43%)
Query: 3 DVWQVQAGTYFYHGHLGMQRSAGLYGSLIV 32
++ + G + +G + AG+ ++
Sbjct: 109 EMKASKPGWWLLDTEVGEIQRAGMQTPFLI 138
|
| >d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 149 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.4 bits (143), Expect = 3e-11
Identities = 22/78 (28%), Positives = 27/78 (34%), Gaps = 16/78 (20%)
Query: 352 NLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADN 411
N ++H H HGH F R + IFP + L
Sbjct: 79 NEIDLHTVHFHGHSFQYKHR----------------GVYSSDVFDIFPGTYQTLEMFPRT 122
Query: 412 PGAWAFHCHIEPHFHIGM 429
PG W HCH+ H H GM
Sbjct: 123 PGIWLLHCHVTDHIHAGM 140
|
| >d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 116 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Score = 51.6 bits (123), Expect = 6e-09
Identities = 11/81 (13%), Positives = 15/81 (18%), Gaps = 19/81 (23%)
Query: 349 IRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFV 408
+ E+ H +G + T
Sbjct: 51 GMSSGPELFSIHFNGQVLEQNHHKIS-------------------AITLVSATSTTANMT 91
Query: 409 ADNPGAWAFHCHIEPHFHIGM 429
G W I HF GM
Sbjct: 92 VSPEGRWTIASLIPRHFQAGM 112
|
| >d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Length = 174 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Score = 53.2 bits (127), Expect = 6e-09
Identities = 22/192 (11%), Positives = 55/192 (28%), Gaps = 40/192 (20%)
Query: 45 DGEFNLLLSDWWH--------RSVHEQEVGLSSRPLRWIG-EPQTLLINGRGQFNCSLAA 95
+ + LL++D S E P +T+L+NG+ +
Sbjct: 6 EYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVWPYLEVEP 65
Query: 96 HFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKN-HKMVVVEAD 154
YR R+ + + + NL++ N + + +D
Sbjct: 66 RK----------------------------YRFRVINASNTRTYNLSLDNGGDFIQIGSD 97
Query: 155 GNYV-QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPA-LTLLNYHP 212
G + + +++ + E Y +++ + ++ P ++ +
Sbjct: 98 GGLLPRSVKLNSFSLAPAERYDIIIDFTAYEGESIILANSAGCGGDVNPETDANIMQFRV 157
Query: 213 TSASKIPLSPPP 224
T
Sbjct: 158 TKPLAQKDESRK 169
|
| >d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 145 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.9 bits (121), Expect = 2e-08
Identities = 15/83 (18%), Positives = 24/83 (28%), Gaps = 19/83 (22%)
Query: 351 PNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 410
N +++H + G+ + G TA +FP L D
Sbjct: 77 GNEADVHGIYFSGNTYLWRGERRD-------------------TANLFPQTSLTLHMWPD 117
Query: 411 NPGAWAFHCHIEPHFHIGMGVVL 433
G + C H+ GM
Sbjct: 118 TEGTFNVECLTTDHYTGGMKQKY 140
|
| >d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 145 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.4 bits (86), Expect = 8e-04
Identities = 6/32 (18%), Positives = 11/32 (34%)
Query: 2 LDVWQVQAGTYFYHGHLGMQRSAGLYGSLIVD 33
L +W GT+ + G+ V+
Sbjct: 112 LHMWPDTEGTFNVECLTTDHYTGGMKQKYTVN 143
|
| >d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId: 1108]} Length = 139 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Auracyanin species: Chloroflexus aurantiacus [TaxId: 1108]
Score = 47.2 bits (111), Expect = 4e-07
Identities = 12/78 (15%), Positives = 23/78 (29%), Gaps = 5/78 (6%)
Query: 357 HPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPP-----LKNTAVIFPYGWTALRFVADN 411
+ + ++ PP L TA++ ++ F
Sbjct: 54 VQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSVTFRTPA 113
Query: 412 PGAWAFHCHIEPHFHIGM 429
PG + + C H+ GM
Sbjct: 114 PGTYLYICTFPGHYLAGM 131
|
| >d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 146 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.4 bits (109), Expect = 7e-07
Identities = 12/46 (26%), Positives = 15/46 (32%)
Query: 388 NPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVL 433
+T +FP VA NPG W C H G+
Sbjct: 96 KNYRIDTINLFPATLFDAYMVAQNPGEWMLSCQNLNHLKAGLQAFF 141
|
| >d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 146 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.2 bits (85), Expect = 0.001
Identities = 5/32 (15%), Positives = 7/32 (21%)
Query: 2 LDVWQVQAGTYFYHGHLGMQRSAGLYGSLIVD 33
+ G + AGL V
Sbjct: 113 AYMVAQNPGEWMLSCQNLNHLKAGLQAFFQVQ 144
|
| >d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 129 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Score = 45.5 bits (107), Expect = 1e-06
Identities = 26/33 (78%), Positives = 28/33 (84%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKE 40
GT+FYHGHLGMQRSAGLYGSLIVD G+KE
Sbjct: 97 NPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKE 129
|
| >d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 162 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Score = 44.3 bits (104), Expect = 5e-06
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 5 WQVQAGTYFYHGHLGMQRSAGLYGSLIVD 33
Q GT +YH H Q G+ G++ ++
Sbjct: 128 RARQYGTSWYHSHFSAQYGNGVVGTIQIN 156
|
| >d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Length = 173 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Score = 44.1 bits (104), Expect = 6e-06
Identities = 18/88 (20%), Positives = 28/88 (31%), Gaps = 14/88 (15%)
Query: 349 IRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKN--TAVIFPYGWTALR 406
+ + HL G + GKF NPP + T +I A
Sbjct: 79 VHSQANRDTRPHLIGGHGDYVWA-TGKFR----------NPPDLDQETWLIPGGTAGAAF 127
Query: 407 FVADNPGAWAFHCH-IEPHFHIGMGVVL 433
+ PG +A+ H + F +G
Sbjct: 128 YTFRQPGVYAYVNHNLIEAFELGAAGHF 155
|
| >d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Length = 151 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Score = 43.2 bits (101), Expect = 1e-05
Identities = 25/127 (19%), Positives = 36/127 (28%), Gaps = 19/127 (14%)
Query: 312 EYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGR 371
EY V V A T G TV + + N +H+ G F +
Sbjct: 36 EYVVFNGHVGALT--GDNALKAKAGETVRMYVGNGGPNLV-----SSFHVIGEIFDKVYV 88
Query: 372 GEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGV 431
GK + ++ G + F D PG + H G
Sbjct: 89 EGGKL-----------INENVQSTIVPAGGSAIVEFKVDIPGNYTLVDHSIFR-AFNKGA 136
Query: 432 VLALGVE 438
+ L VE
Sbjct: 137 LGQLKVE 143
|
| >d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} Length = 153 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Rusticyanin species: Thiobacillus ferrooxidans [TaxId: 920]
Score = 42.5 bits (99), Expect = 2e-05
Identities = 14/93 (15%), Positives = 21/93 (22%), Gaps = 16/93 (17%)
Query: 338 TVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVI 397
TVDV N N H + + + + V
Sbjct: 69 TVDVTFINTNK-----GFGHSFDITKKGPPYAVMPVI----------DPIVAGTGFSPVP 113
Query: 398 FPYGWTALRF-VADNPGAWAFHCHIEPHFHIGM 429
+ F G + + C I H G
Sbjct: 114 KDGKFGYTNFTWHPTAGTYYYVCQIPGHAATGQ 146
|
| >d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} Length = 153 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Rusticyanin species: Thiobacillus ferrooxidans [TaxId: 920]
Score = 40.2 bits (93), Expect = 1e-04
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIV 32
AGTY+Y + + G +G ++V
Sbjct: 128 TAGTYYYVCQIPGHAATGQFGKIVV 152
|
| >d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 130 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Score = 41.9 bits (98), Expect = 2e-05
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIVD 33
QAGT++YH HL Q GL G +V
Sbjct: 102 QAGTFWYHSHLSTQYCDGLRGPFVVY 127
|
| >d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 131 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Score = 41.5 bits (97), Expect = 3e-05
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIVD 33
AGT++YH H G Q GL G +++
Sbjct: 102 HAGTFWYHSHFGTQYCDGLRGPMVIY 127
|
| >d1oe1a2 b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Length = 177 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Score = 41.0 bits (96), Expect = 9e-05
Identities = 19/84 (22%), Positives = 28/84 (33%), Gaps = 14/84 (16%)
Query: 349 IRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKN--TAVIFPYGWTALR 406
I + HL G + GKF NPP ++ T I A
Sbjct: 79 IHSQANRDTRPHLIGGHGDWVWET-GKFA----------NPPQRDLETWFIRGGSAGAAL 127
Query: 407 FVADNPGAWAFHCH-IEPHFHIGM 429
+ PG +A+ H + F +G
Sbjct: 128 YTFKQPGVYAYLNHNLIEAFELGA 151
|
| >d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 136 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Score = 40.0 bits (93), Expect = 9e-05
Identities = 14/26 (53%), Positives = 17/26 (65%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIVD 33
QAGTY+YH HL Q GL G+ +V
Sbjct: 102 QAGTYWYHSHLSTQYCDGLRGAFVVY 127
|
| >d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Length = 159 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Score = 40.1 bits (93), Expect = 1e-04
Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
Query: 8 QAGTYFYHGH----LGMQRSAGLYGSLIVDVADGEKEP 41
++GT+ YH + +G+ G+L+V DG K+P
Sbjct: 122 RSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDP 159
|
| >d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Length = 159 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Score = 36.2 bits (83), Expect = 0.003
Identities = 17/89 (19%), Positives = 26/89 (29%), Gaps = 21/89 (23%)
Query: 352 NLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADN 411
+ P ++ H G + P LRF AD
Sbjct: 82 PATNAMPHNVEFHGATGALGGAK-------------------LTNVNPGEQATLRFKADR 122
Query: 412 PGAWAFHCHIEPH--FHIGMGVVLALGVE 438
G + +HC E +H+ G+ L V
Sbjct: 123 SGTFVYHCAPEGMVPWHVVSGMSGTLMVL 151
|
| >d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 192 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.5 bits (94), Expect = 1e-04
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 6/42 (14%)
Query: 8 QAGTYFYHGHLGMQR--SAGLYGSLIVDVADGEKEPFHYDGE 47
T YH H+ + ++GL G LI+ +K+ + E
Sbjct: 154 NCVTRIYHSHIDAPKDIASGLIGPLIIC----KKDSLDKEKE 191
|
| >d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 140 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Score = 38.2 bits (88), Expect = 5e-04
Identities = 10/36 (27%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Query: 8 QAGTYFYHGHL----GMQRSAGLYGSLIVDVADGEK 39
A T ++H H G Q + GL G ++++ + K
Sbjct: 104 PAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILK 139
|
| >d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Length = 151 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Score = 37.4 bits (86), Expect = 9e-04
Identities = 17/80 (21%), Positives = 23/80 (28%), Gaps = 17/80 (21%)
Query: 360 HLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHC 419
H DF G P + F A PG + +HC
Sbjct: 80 VPHNVDFHAATGQGGGAA----------------ATFTAPGRTSTFSFKALQPGLYIYHC 123
Query: 420 HIEPH-FHIGMGVVLALGVE 438
+ P HI G+ + VE
Sbjct: 124 AVAPVGMHIANGMYGLILVE 143
|
| >d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Length = 151 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Score = 37.0 bits (85), Expect = 0.001
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Query: 8 QAGTYFYHGH---LGMQRSAGLYGSLIVDVADGEKE 40
Q G Y YH +GM + G+YG ++V+ +G +
Sbjct: 115 QPGLYIYHCAVAPVGMHIANGMYGLILVEPKEGLPK 150
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 463 | |||
| d1aoza3 | 214 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 100.0 | |
| d1aoza2 | 209 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 100.0 | |
| d1v10a2 | 168 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 100.0 | |
| d2q9oa2 | 181 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 100.0 | |
| d1hfua2 | 172 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 100.0 | |
| d1hfua3 | 200 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 100.0 | |
| d1gyca2 | 170 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 100.0 | |
| d1v10a3 | 190 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 100.0 | |
| d1gyca3 | 199 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 100.0 | |
| d2q9oa3 | 216 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 100.0 | |
| d1gska3 | 154 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 99.97 | |
| d1kv7a3 | 181 | multi-copper oxidase CueO {Escherichia coli [TaxId | 99.94 | |
| d1gska2 | 174 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 99.9 | |
| d1kv7a2 | 165 | multi-copper oxidase CueO {Escherichia coli [TaxId | 99.9 | |
| d2j5wa5 | 149 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.9 | |
| d1sddb2 | 139 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.87 | |
| d2j5wa2 | 145 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.87 | |
| d1sdda2 | 116 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.85 | |
| d1kcwa2 | 146 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.84 | |
| d1kbva2 | 151 | Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani | 99.83 | |
| d2bw4a2 | 173 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.69 | |
| d1oe1a2 | 177 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.6 | |
| d1e30a_ | 153 | Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920 | 99.51 | |
| d1aoza1 | 129 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 99.42 | |
| d2q9oa1 | 162 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 99.34 | |
| d1kbva2 | 151 | Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani | 99.31 | |
| d1kbva1 | 151 | Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani | 99.28 | |
| d1oe2a1 | 159 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.27 | |
| d1mzya1 | 153 | Nitrite reductase, NIR {Rhodobacter sphaeroides [T | 99.26 | |
| d2bw4a1 | 157 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.25 | |
| d1qhqa_ | 139 | Auracyanin {Chloroflexus aurantiacus [TaxId: 1108] | 99.08 | |
| d1kv7a1 | 140 | multi-copper oxidase CueO {Escherichia coli [TaxId | 99.06 | |
| d1hfua1 | 131 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 99.04 | |
| d1gyca1 | 130 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 99.04 | |
| d2j5wa1 | 192 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 98.99 | |
| d1oe1a2 | 177 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 98.98 | |
| d2bw4a2 | 173 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 98.97 | |
| d1ibya_ | 112 | Red copper protein nitrosocyanin {Nitrosomonas eur | 98.96 | |
| d1sddb1 | 67 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 98.9 | |
| d1v10a1 | 136 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 98.79 | |
| d1mzya2 | 178 | Nitrite reductase, NIR {Rhodobacter sphaeroides [T | 98.67 | |
| d1sddb2 | 139 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 98.65 | |
| d1sdda1 | 180 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 98.6 | |
| d2j5wa2 | 145 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 98.59 | |
| d1fwxa1 | 132 | Nitrous oxide reductase, C-terminal domain {Paraco | 98.54 | |
| d1kv7a3 | 181 | multi-copper oxidase CueO {Escherichia coli [TaxId | 98.49 | |
| d1kcwa2 | 146 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 98.42 | |
| d2j5wa3 | 207 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 98.36 | |
| d2j5wa5 | 149 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 98.3 | |
| d2j5wa4 | 179 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 98.22 | |
| d1sdda2 | 116 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 98.11 | |
| d1qnia1 | 131 | Nitrous oxide reductase, C-terminal domain {Pseudo | 97.97 | |
| d1v10a2 | 168 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 97.95 | |
| d1gska1 | 181 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 97.85 | |
| d1gska3 | 154 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 97.72 | |
| d2q9oa2 | 181 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 97.67 | |
| d1aoza2 | 209 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 97.62 | |
| d1hfua2 | 172 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 97.6 | |
| d1gyca2 | 170 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 97.59 | |
| d1e30a_ | 153 | Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920 | 97.46 | |
| d2q5ba1 | 105 | Plastocyanin {Cyanobacterium (Phormidium laminosum | 97.28 | |
| d2cuaa_ | 122 | Cytochrome c oxidase {Thermus thermophilus, ba3 ty | 97.24 | |
| d1aoza1 | 129 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 97.16 | |
| d1pcsa_ | 98 | Plastocyanin {Cyanobacterium (Synechocystis sp.), | 97.12 | |
| d1mzya2 | 178 | Nitrite reductase, NIR {Rhodobacter sphaeroides [T | 97.07 | |
| d2plta_ | 98 | Plastocyanin {Green alga (Chlamydomonas reinhardti | 97.05 | |
| d1oe2a1 | 159 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 96.87 | |
| d1hfua3 | 200 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 96.79 | |
| d1aoza3 | 214 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 96.78 | |
| d1bxua_ | 91 | Plastocyanin {Cyanobacterium (Synechocystis sp.), | 96.74 | |
| d2q9oa1 | 162 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 96.6 | |
| d1kv7a1 | 140 | multi-copper oxidase CueO {Escherichia coli [TaxId | 96.58 | |
| d2bw4a1 | 157 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 96.57 | |
| d1ibya_ | 112 | Red copper protein nitrosocyanin {Nitrosomonas eur | 96.5 | |
| d1pmya_ | 123 | Pseudoazurin {Methylobacterium extorquens, strain | 96.48 | |
| d1hfua1 | 131 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 96.46 | |
| d1plca_ | 99 | Plastocyanin {Poplar (Populus nigra), variant ital | 96.45 | |
| d1gyca1 | 130 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 96.43 | |
| d2jxma1 | 97 | Plastocyanin {Photosynthetic prokaryote (Prochloro | 96.35 | |
| d1sddb1 | 67 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 96.34 | |
| d1v10a1 | 136 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 96.21 | |
| d1mzya1 | 153 | Nitrite reductase, NIR {Rhodobacter sphaeroides [T | 96.21 | |
| d1paza_ | 120 | Pseudoazurin {Alcaligenes faecalis, strain s-6 [Ta | 96.19 | |
| d1kbva1 | 151 | Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani | 96.15 | |
| d2ccwa1 | 129 | Azurin {Alcaligenes xylosoxidans, NCIMB (11015), d | 96.1 | |
| d1cuoa_ | 129 | Azurin {Methylomonas sp. j [TaxId: 32038]} | 96.1 | |
| d1v10a3 | 190 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 96.07 | |
| d1jzga_ | 128 | Azurin {Pseudomonas aeruginosa [TaxId: 287]} | 96.01 | |
| d1kdja_ | 102 | Plastocyanin {Fern (Adiantum capillus-veneris) [Ta | 95.92 | |
| d2ov0a1 | 105 | Amicyanin {Paracoccus denitrificans [TaxId: 266]} | 95.73 | |
| d1kv7a2 | 165 | multi-copper oxidase CueO {Escherichia coli [TaxId | 95.68 | |
| d2cj3a1 | 105 | Plastocyanin {Anabaena variabilis [TaxId: 1172]} | 95.66 | |
| d1nwpa_ | 128 | Azurin {Pseudomonas putida [TaxId: 303]} | 95.58 | |
| d1bypa_ | 99 | Plastocyanin {White campion (Silene pratensis) [Ta | 95.51 | |
| d1fwxa1 | 132 | Nitrous oxide reductase, C-terminal domain {Paraco | 95.48 | |
| d1adwa_ | 123 | Pseudoazurin {Thiosphaera pantotropha [TaxId: 8236 | 95.27 | |
| d1bqka_ | 124 | Pseudoazurin {Achromobacter cycloclastes [TaxId: 2 | 95.18 | |
| d1iuza_ | 98 | Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: | 95.12 | |
| d1pmya_ | 123 | Pseudoazurin {Methylobacterium extorquens, strain | 94.96 | |
| d1gska2 | 174 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 94.86 | |
| d1qhqa_ | 139 | Auracyanin {Chloroflexus aurantiacus [TaxId: 1108] | 94.54 | |
| d1adwa_ | 123 | Pseudoazurin {Thiosphaera pantotropha [TaxId: 8236 | 94.54 | |
| d1cuoa_ | 129 | Azurin {Methylomonas sp. j [TaxId: 32038]} | 94.52 | |
| d1bxua_ | 91 | Plastocyanin {Cyanobacterium (Synechocystis sp.), | 94.25 | |
| d1bqka_ | 124 | Pseudoazurin {Achromobacter cycloclastes [TaxId: 2 | 94.11 | |
| d1gyca3 | 199 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 94.09 | |
| d1paza_ | 120 | Pseudoazurin {Alcaligenes faecalis, strain s-6 [Ta | 93.59 | |
| d2ccwa1 | 129 | Azurin {Alcaligenes xylosoxidans, NCIMB (11015), d | 93.53 | |
| d1qnia1 | 131 | Nitrous oxide reductase, C-terminal domain {Pseudo | 93.06 | |
| d2q9oa3 | 216 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 92.4 | |
| d1id2a_ | 106 | Amicyanin {Paracoccus versutus (Thiobacillus versu | 92.14 | |
| d1jzga_ | 128 | Azurin {Pseudomonas aeruginosa [TaxId: 287]} | 92.07 | |
| d1nwpa_ | 128 | Azurin {Pseudomonas putida [TaxId: 303]} | 90.78 | |
| d1gska1 | 181 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 90.39 | |
| d2cuaa_ | 122 | Cytochrome c oxidase {Thermus thermophilus, ba3 ty | 89.78 | |
| d1cyxa_ | 158 | Quinol oxidase (CyoA) {Escherichia coli [TaxId: 56 | 87.18 | |
| d2j5wa3 | 207 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 83.29 |
| >d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=100.00 E-value=3.9e-47 Score=345.31 Aligned_cols=212 Identities=68% Similarity=1.255 Sum_probs=187.3
Q ss_pred CCCccceEEEEEeeeeccCCeEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceE
Q 012467 251 PPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGV 330 (463)
Q Consensus 251 ~p~~~d~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 330 (463)
||.+.++++.+...++..+|..+|+|||++|..|++|+|.+.+++..+.++...+|..|+.+++....+.+...+.|+++
T Consensus 1 pP~~~~~ti~l~~~~~~~ng~~~~~iNniSf~~P~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~v 80 (214)
T d1aoza3 1 PPVKFNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGV 80 (214)
T ss_dssp CCSSCSEEEEEEEEEEEETTEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCC
T ss_pred CCCCCCeEEEEecCccccCCeEEEEECCEeccCCCcchHHHHhhccccccccCCCcccccccccccCCCCCcccccCcee
Confidence 45678999999887777788899999999999999999999888887777667777777767665555666667888999
Q ss_pred EEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcC
Q 012467 331 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 410 (463)
Q Consensus 331 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~ad 410 (463)
+.++.|++|||+|+|.+.+.......||||||||+||||+++.|.++..+...+|+.+|++|||+.|++++|++|||++|
T Consensus 81 ~~~~~g~~veivl~n~~~~~~~~~~~HP~HlHG~~F~vl~~~~g~~~~~~~~~~n~~~p~~rDTv~v~~g~~~~ir~~ad 160 (214)
T d1aoza3 81 YQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVAD 160 (214)
T ss_dssp EEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECC
T ss_pred EEecCCCEEEEEEeccccccCCCCCCcceEeecceeEEeccCCCcccccccccccccCCceecCcccCCCceEEEEEecC
Confidence 99999999999999977543223447999999999999999999998877788999999999999999999999999999
Q ss_pred CceeeeecccchHhHHccceeeeeccccccccCCCCCccccCccc-CCCCCCC
Q 012467 411 NPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACGLTGK-RFMNPKQ 462 (463)
Q Consensus 411 npG~w~~HCHi~~H~~~GM~~~~~~~~~~~~~~P~~~~~C~~~~~-~~~~~~~ 462 (463)
|||.|+||||+++|++.|||++|.|++++++++|+.+++||.+.. ...+|+|
T Consensus 161 npG~w~~HCH~~~H~~~GM~~~~~v~~~~~~~~P~~~~~cg~~~~~~~~~~~~ 213 (214)
T d1aoza3 161 NPGVWAFHCHIEPHLHMGMGVVFAEGVEKVGRIPTKALACGGTAKSLINNPKN 213 (214)
T ss_dssp SCEEEEEEESSHHHHHTTCEEEEEECGGGCCCCCHHHHSSHHHHHHHSCCCSC
T ss_pred CCeeEEEEECcHHHHhCcCcEEEEEccccccCCCccccccccchhhhccCCCC
Confidence 999999999999999999999999999999999999999999988 6777877
|
| >d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=100.00 E-value=3e-38 Score=288.81 Aligned_cols=199 Identities=68% Similarity=1.228 Sum_probs=165.7
Q ss_pred CCCCCcceEEEEeeeecccHHHHHhhhcCCCCCCCCCCCeEEECCCCCCCCccccccCC----CCccccccCCCCCCCce
Q 012467 41 PFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSN----GSAEQCKLRGNEQCAPQ 116 (463)
Q Consensus 41 p~~~d~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~----~~~~~c~~~~~~~~~~~ 116 (463)
|++||+|++|+|+||+|....++...+...+..+.+++|++||||+++++|+....+.. +....|+ +...+
T Consensus 1 p~~yD~e~~l~l~DWyh~~~~~~~~~~~~~~~~~~~~~d~~ling~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 75 (209)
T d1aoza2 1 PFHYDGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCSIAAKYDSNLEPCKLKGSE-----SCAPY 75 (209)
T ss_dssp SSCCSEEEEEEEEEECSSCHHHHHHHTTSSSCCCCCSCSEEEETTBCCSSSBTTGGGCTTSCBCCCCSCS-----TTSCC
T ss_pred CCCCCceEEEEEEeCCCCCHHHHHHHHhcCCCCCCCCCCeeEEcCCCCcCCCcccccccccccccccCCC-----CCCce
Confidence 67899999999999999999888877776665557789999999999999987443321 1222333 56667
Q ss_pred EEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecC
Q 012467 117 ILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRG 196 (463)
Q Consensus 117 ~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~ 196 (463)
+|+|++|++|||||||+|+.+.+.|+|+||+|+|||+||++|+|+.++.|.|+|||||||+|++++.++++|||++....
T Consensus 76 ~~~v~~g~~~RlRliNa~~~~~~~~~idgh~~~VIa~DG~~v~P~~v~~l~i~pGqRydvlv~~~~~~~~~y~i~~~~~~ 155 (209)
T d1aoza2 76 IFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRA 155 (209)
T ss_dssp CEEECTTCEEEEEEEECCSSCEEEEEETTCCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEES
T ss_pred EEEEcCCCEEEEEEEecCCceeEEEEeCCCcEEEEecCCEEcccceeeeEEEccCcEEEEEEEecCCCCCceEEEEeccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999866678999998887
Q ss_pred CCCCCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccc
Q 012467 197 RKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFA 244 (463)
Q Consensus 197 ~~~~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~ 244 (463)
.+.+....+|+|+|.++.....++.+.|..|.|.|+.....+..++.+
T Consensus 156 ~~~~~~~~~ail~y~~~~~~~~~~~~~p~~p~~~D~~~a~~f~~~~~~ 203 (209)
T d1aoza2 156 RHPNTPPGLTLLNYLPNSVSKLPTSPPPQTPAWDDFDRSKNFTYRITA 203 (209)
T ss_dssp SCCCSCCEEEEEEETTSCTTSCCSSCCCCCCCTTCHHHHHHHHTTCCB
T ss_pred cCCCccceeEEEEeCCCCcCCCCCCCCCCCCCccchHHHHhhhhhhhc
Confidence 777788899999999877665666666777888777655544444443
|
| >d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=100.00 E-value=4.9e-36 Score=261.28 Aligned_cols=152 Identities=28% Similarity=0.507 Sum_probs=125.6
Q ss_pred CCCC-cceEEEEeeeecccHHHHHhhhcCCCCCCCCCCCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEe
Q 012467 42 FHYD-GEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHV 120 (463)
Q Consensus 42 ~~~d-~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v 120 (463)
|+|| +|++|+|+||+|+...+++.... ..++.++++||||++++.|.. .....++++|
T Consensus 1 YD~Dd~e~vi~lsDW~h~~~~~l~~~~~----~~~~~pd~~liNGkg~~~~~~-----------------~~~~~~~~~v 59 (168)
T d1v10a2 1 YDVDDASTVITIADWYHSLSTVLFPNPN----KAPPAPDTTLINGLGRNSANP-----------------SAGQLAVVSV 59 (168)
T ss_dssp CSBCSGGGEEEEEEECSSCCC-----------CCCSCCSEEEETTBCCCSSCG-----------------GGSCCCEEEE
T ss_pred CCCCCCccEEEEEECCCCCHHHHHhccC----CCCCCCceeeecCCCCcCCCC-----------------cCCCceEEEE
Confidence 4675 78999999999998877654332 226789999999999986653 1334568999
Q ss_pred cCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCCC
Q 012467 121 QPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPA 200 (463)
Q Consensus 121 ~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~~ 200 (463)
++||+|||||||+|+.+.+.|+|++|+|+|||+||.+++|+.++.|.|+|||||||+|++++ ++++||||+.....|..
T Consensus 60 ~~g~~~rlRlina~~~~~~~~~id~H~~~Via~DG~~v~P~~~d~i~i~~GqR~dvlv~~~~-~~~~y~ira~~~~~~~~ 138 (168)
T d1v10a2 60 QSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQ-AVGNYWIRANPSNGRNG 138 (168)
T ss_dssp CTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCS-CSSEEEEEEEESSSSCS
T ss_pred CCCCEEEEEEEecccCceEEEEECCCeEEEEEeCCeecCceEEeEEEEccCceEEEEEECCC-CCCcEEEEEEeccCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999998 67899999988766642
Q ss_pred --CCCeEEEEEeCCCCC
Q 012467 201 --TPPALTLLNYHPTSA 215 (463)
Q Consensus 201 --~~~~~a~l~y~~~~~ 215 (463)
.....|+|+|++++.
T Consensus 139 ~~~~~~~aiL~Y~g~~~ 155 (168)
T d1v10a2 139 FTGGINSAIFRYQGAAV 155 (168)
T ss_dssp CGGGTTEEEEEETTCCS
T ss_pred CCCCceEEEEEECCCCC
Confidence 345679999997543
|
| >d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=100.00 E-value=1e-35 Score=262.13 Aligned_cols=149 Identities=22% Similarity=0.372 Sum_probs=127.7
Q ss_pred CCcce-EEEEeeeecccHHHHHhhhcCCCCCCCCCCCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecC
Q 012467 44 YDGEF-NLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQP 122 (463)
Q Consensus 44 ~d~e~-~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~ 122 (463)
||.|. +|+|+||+|+...++........ .+.+|++||||++++.|+. ......++|++
T Consensus 1 YD~D~~vi~lsDW~h~~~~~~~~~~~~~~---~p~~d~~LINGkg~~~~~~------------------~~~~~~~~v~~ 59 (181)
T d2q9oa2 1 YDIDLGVFPITDYYYRAADDLVHFTQNNA---PPFSDNVLINGTAVNPNTG------------------EGQYANVTLTP 59 (181)
T ss_dssp CSEEEEEEEEEEECSSCHHHHHHHHTTSC---CCCBSEEEETTBCBCTTTC------------------CBCCCEEEECT
T ss_pred CCccCeeEEEEecCCCCHHHHHhhcccCC---CCCcceEEECCcCCCCCCC------------------CCcceEEEECC
Confidence 67777 89999999999888766544332 4578999999999986653 23345899999
Q ss_pred CCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCC---
Q 012467 123 NKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP--- 199 (463)
Q Consensus 123 g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~--- 199 (463)
||+|||||||+|+.+.+.|+|+||+|+|||+||.+++|+.++.|.|++||||||+|++++ ++|+||||+.....+.
T Consensus 60 g~~~rlR~iN~~~~~~~~~~id~h~~~via~DG~~v~P~~~~~~~i~~GqRydvlv~a~~-~~~~Y~ir~~~~~~~~~~~ 138 (181)
T d2q9oa2 60 GKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASR-APDNYWFNVTFGGQAACGG 138 (181)
T ss_dssp TCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCS-CSSEEEEEEECCGGGTTCC
T ss_pred CCEEEEEEecccCCccEEEEECCceEEEEEeCCeEccceEeCEEEecCCcEEEEEEeCCC-CCccEEEEEeccccccccC
Confidence 999999999999999999999999999999999999999999999999999999999998 6789999998766553
Q ss_pred -CCCCeEEEEEeCCCC
Q 012467 200 -ATPPALTLLNYHPTS 214 (463)
Q Consensus 200 -~~~~~~a~l~y~~~~ 214 (463)
......|||+|+++.
T Consensus 139 ~~~~~~~ail~Y~ga~ 154 (181)
T d2q9oa2 139 SLNPHPAAIFHYAGAP 154 (181)
T ss_dssp BSSSCCEEEEEETTSC
T ss_pred CCCCceEEEEEECCCC
Confidence 245678999998654
|
| >d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=100.00 E-value=1.6e-35 Score=259.25 Aligned_cols=147 Identities=28% Similarity=0.565 Sum_probs=124.5
Q ss_pred CCCC-CcceEEEEeeeecccHHHHHhhhcCCCCCCCCCCCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEE
Q 012467 41 PFHY-DGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILH 119 (463)
Q Consensus 41 p~~~-d~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~ 119 (463)
.|++ |+|++|+|+||+|+...++.. .+.+|+.||||++.+.|.. ....++|+
T Consensus 5 ~YD~dD~e~vl~l~DW~h~~~~~~~~---------~~~pd~~liNG~g~~~~~~------------------~~~~~~~~ 57 (172)
T d1hfua2 5 LYDEDDENTIITLADWYHIPAPSIQG---------AAQPDATLINGKGRYVGGP------------------AAELSIVN 57 (172)
T ss_dssp GCSBCSTTSEEEEEEECSSCGGGCC------------CCSEEEETTBCCBTTCC------------------CCCCCEEE
T ss_pred cCCCCCCeEEEEEEECCCCChHHhhc---------cCCCCcEEECccCccCCCC------------------CCCceEEE
Confidence 4554 589999999999998765421 4578999999999975532 34557899
Q ss_pred ecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCC
Q 012467 120 VQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP 199 (463)
Q Consensus 120 v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~ 199 (463)
|++||+|||||||+|+.+.+.|+|++|+|+|||+||++|+|+++++|.|++||||||+|++++ ++|+||||+.....+.
T Consensus 58 v~~g~~~rlR~iN~~~~~~~~~~i~~H~~~via~DG~~v~P~~~~~l~i~~gqR~dvlv~~~~-~~~~Y~ira~~~~~~~ 136 (172)
T d1hfua2 58 VEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDANQ-PVDNYWIRAQPNKGRN 136 (172)
T ss_dssp ECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCS-CSSEEEEEEEESSCGG
T ss_pred ECCCCEEEEEEeeecCCceEEEEeCCCeEEEEEeCCEEcccEEeceEeccCCeEEEEEEEcCC-CCCcEEEEEEeccCcc
Confidence 999999999999999999999999999999999999999999999999999999999999998 5789999998876654
Q ss_pred ------CCCCeEEEEEeCCCCC
Q 012467 200 ------ATPPALTLLNYHPTSA 215 (463)
Q Consensus 200 ------~~~~~~a~l~y~~~~~ 215 (463)
......|+|+|++++.
T Consensus 137 ~~~~~~~~~~~~aiL~Y~g~~~ 158 (172)
T d1hfua2 137 GLAGTFANGVNSAILRYAGAAN 158 (172)
T ss_dssp GGGGCCGGGTTEEEEEETTSCS
T ss_pred cccCcCCCceEEEEEEECCCCC
Confidence 1345789999997543
|
| >d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=100.00 E-value=5.6e-36 Score=269.41 Aligned_cols=167 Identities=30% Similarity=0.487 Sum_probs=129.1
Q ss_pred CCccceEEEEEeeeeccCCeEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEE
Q 012467 252 PTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVY 331 (463)
Q Consensus 252 p~~~d~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (463)
|..+|.++.+.+... + ..|+|||++|..+..|.|.+...+..... ..+.+..++
T Consensus 19 p~~aD~~~~~~~~~~---~-~~wtINg~s~~~~~~p~l~~~~~~~~~~~----------------------~~~~~~~v~ 72 (200)
T d1hfua3 19 PGAADVNLRFQLGFS---G-GRFTINGTAYESPSVPTLLQIMSGAQSAN----------------------DLLPAGSVY 72 (200)
T ss_dssp TTCSSEEEECCEEEE---T-TEEEETTBCCCCCSSCHHHHHHTTCCSGG----------------------GSSSTTSEE
T ss_pred CCcCcEEEEEeEeec---c-cEEEECCEeccCCCCChhhhhhcCCcCcc----------------------cccccCceE
Confidence 345676666655432 1 36999999999998898876654332111 012234579
Q ss_pred EccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCC-CcEEEEEEEcC
Q 012467 332 MLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFP-YGWTALRFVAD 410 (463)
Q Consensus 332 ~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~-~g~~~irf~ad 410 (463)
.++.|++++|++.|.... ..||||||||+|+||+++.+. .+++.+|+||||+.|++ |+|++|||++|
T Consensus 73 ~~~~~~~~~~v~~~~~~~-----~~Hp~HlHg~~F~vl~~~g~~-------~~~~~~~~~rDtv~v~~~G~~~~ir~~ad 140 (200)
T d1hfua3 73 ELPRNQVVELVVPAGVLG-----GPHPFHLHGHAFSVVRSAGSS-------TYNFVNPVKRDVVSLGVTGDEVTIRFVTD 140 (200)
T ss_dssp EECSSCEEEEEEECCSTT-----CCCEEEETTCCEEEEECTTCC-------CCCCSSBCEESEEECCSTTCEEEEEEECC
T ss_pred EecCCcceEEEEeecccc-----ccCceeecCCcEEEEeccCCC-------CCccccCcccceEEeCCCCEEEEEEEECC
Confidence 999999999999887543 289999999999999986543 25678899999999975 67999999999
Q ss_pred CceeeeecccchHhHHccceeeeeccccccc---cCCCC-CccccCcccC
Q 012467 411 NPGAWAFHCHIEPHFHIGMGVVLALGVETVG---NIPNQ-ALACGLTGKR 456 (463)
Q Consensus 411 npG~w~~HCHi~~H~~~GM~~~~~~~~~~~~---~~P~~-~~~C~~~~~~ 456 (463)
|||.|+|||||++|++.|||++|+|++++++ .+|+. .+.|+.|+..
T Consensus 141 npG~w~~HCHi~~H~~~GM~~~~~~~~~~~~~~~~~p~~~~~~C~~~~~~ 190 (200)
T d1hfua3 141 NPGPWFFHCHIEFHLMNGLAIVFAEDMANTVDANNPPVEWAQLCEIYDDL 190 (200)
T ss_dssp SCEEEEEEESSHHHHHTTCEEEEEECHHHHHHHCCCCHHHHHHHHHHHTC
T ss_pred CCeeeEEEeCCChHHhCCCcEEEEEcCCCcccccCCChhhhccccccccc
Confidence 9999999999999999999999999987764 35555 4689998754
|
| >d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=100.00 E-value=3.8e-34 Score=249.74 Aligned_cols=147 Identities=28% Similarity=0.482 Sum_probs=123.4
Q ss_pred CCCCC-cceEEEEeeeecccHHHHHhhhcCCCCCCCCCCCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEE
Q 012467 41 PFHYD-GEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILH 119 (463)
Q Consensus 41 p~~~d-~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~ 119 (463)
.|+|| +|++|+|+||+|+.... ...++..+++.+|||++.+.|.. ....+++.
T Consensus 6 ~YD~D~ee~vi~lsDWyh~~~~~--------~~~~~~~~d~~liNG~g~~~~~~------------------~~~~~~~~ 59 (170)
T d1gyca2 6 RYDVDNESTVITLTDWYHTAARL--------GPRFPLGADATLINGLGRSASTP------------------TAALAVIN 59 (170)
T ss_dssp GCSBCSGGGEEEEEEECSSCTTT--------SCSSCSSCSEEEETTBCCBTTCT------------------TSCCCEEE
T ss_pred cCCCCCCceEEEEeecCCChhhh--------cccCCCcCCcccccCccccCCCC------------------CCCceEEE
Confidence 45665 66899999999986431 11125578999999999875542 34556899
Q ss_pred ecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCC
Q 012467 120 VQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP 199 (463)
Q Consensus 120 v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~ 199 (463)
|++||+|||||||+|+.+.+.|+|++|+|+|||+||.+++|+.++.|.|++||||||+|++++ ++|+||||+.....|.
T Consensus 60 v~~g~~~rlRlIN~~~~~~~~~~id~h~~~via~DG~~v~P~~~d~l~i~~gqRydvlv~~~~-~~~~y~ira~~~~~~~ 138 (170)
T d1gyca2 60 VQHGKRYRFRLVSISCDPNYTFSIDGHNLTVIEVDGINSQPLLVDSIQIFAAQRYSFVLNANQ-TVGNYWIRANPNFGTV 138 (170)
T ss_dssp ECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCS-CSSEEEEEEEESSSSC
T ss_pred ECCCCEEEEEEeecCCCceeeEEeCCCeEEEEEeCCeeccceEeeEEEecCCeEEEEEEeCCC-CCCcEEEEEecccccc
Confidence 999999999999999999999999999999999999999999999999999999999999998 6789999998876664
Q ss_pred C--CCCeEEEEEeCCCC
Q 012467 200 A--TPPALTLLNYHPTS 214 (463)
Q Consensus 200 ~--~~~~~a~l~y~~~~ 214 (463)
. .....|+|+|+++.
T Consensus 139 ~~~~~~~~aiL~Y~~a~ 155 (170)
T d1gyca2 139 GFAGGINSAILRYQGAP 155 (170)
T ss_dssp SCGGGTTEEEEEETTSC
T ss_pred ccCCCeeEEEEEECCCC
Confidence 2 34568999998654
|
| >d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=100.00 E-value=1.9e-35 Score=265.20 Aligned_cols=164 Identities=29% Similarity=0.462 Sum_probs=126.4
Q ss_pred CCccceEEEEEeeeeccCCeEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEE
Q 012467 252 PTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVY 331 (463)
Q Consensus 252 p~~~d~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (463)
+..+|.++.+.+.++ .+...|+|||++|..+..|.|.....+..... + ...+..++
T Consensus 19 ~~~~d~~~~~~~~~~--~~~~~~~iNg~~f~~~~~p~l~~~~~g~~~~~-----------~-----------~~~~~~~~ 74 (190)
T d1v10a3 19 PGGADINLNLRIGRN--ATTADFTINGAPFIPPTVPVLLQILSGVTNPN-----------D-----------LLPGGAVI 74 (190)
T ss_dssp TTCSSEEEECCEECC--SSSSCCEESSCCCCCCSSCHHHHHHHTCCCGG-----------G-----------SSSTTTEE
T ss_pred CCCCCEEEEEEEEec--CCEeEEEECCEecCCCCCchHHHhhcCCcccc-----------c-----------ccccceeE
Confidence 345677777666543 23457999999999889898876654332211 0 01123368
Q ss_pred EccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCc-EEEEEEEcC
Q 012467 332 MLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYG-WTALRFVAD 410 (463)
Q Consensus 332 ~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g-~~~irf~ad 410 (463)
.+..++++++++.|. . .||||||||+|+|++++.+. .+++.+|.||||+.|+++| |++|||+||
T Consensus 75 ~~~~~~~~~i~~~~~--~------~HP~HlHG~~F~Vl~~~~~~-------~~~~~~~~~rDTv~v~~~g~~~~irf~ad 139 (190)
T d1v10a3 75 SLPANQVIEISIPGG--G------NHPFHLHGHNFDVVRTPGSS-------VYNYVNPVRRDVVSIGGGGDNVTFRFVTD 139 (190)
T ss_dssp EECTTCEEEEEEECC--B------SCEEEESSCCEEEEECTTCS-------CCCCSSCCEESEEECCBSSCEEEEEEECC
T ss_pred EccCccEEEEEeccC--c------cccccccCceEEEEEcCCCc-------ccccccCcccCEEEeCCCeEEEEEEEEcC
Confidence 889999999998884 3 89999999999999986433 2567889999999999876 888999999
Q ss_pred CceeeeecccchHhHHccceeeeeccccccccCCCC----CccccCcc
Q 012467 411 NPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQ----ALACGLTG 454 (463)
Q Consensus 411 npG~w~~HCHi~~H~~~GM~~~~~~~~~~~~~~P~~----~~~C~~~~ 454 (463)
|||.|+|||||++|++.|||++|+|+++++++.+.. ...|..+.
T Consensus 140 npG~w~~HCHi~~H~~~GM~~~~~~~~~~~~~~~~~~~~~~~~c~~~~ 187 (190)
T d1v10a3 140 NPGPWFLHCHIDWHLEAGLAVVFAEDIPNIPIANAISPAWDDLCPKYN 187 (190)
T ss_dssp SCEEEEEEESCHHHHTTTCEEEEEESGGGHHHHSCCCHHHHTHHHHHT
T ss_pred CCeeEEEecCchhhhhCCCcEEEEECCCCCCccCCCCHHHHhhhhhcc
Confidence 999999999999999999999999999888764433 45676654
|
| >d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=100.00 E-value=2.9e-35 Score=264.74 Aligned_cols=170 Identities=30% Similarity=0.497 Sum_probs=131.6
Q ss_pred CccceEEEEEeeeeccCCeEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEE
Q 012467 253 TNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYM 332 (463)
Q Consensus 253 ~~~d~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (463)
...|.++.+.+.++ + ..|+|||++|..|+.|.|.+...+....+ ..+.+..++.
T Consensus 20 ~~~d~~~~l~~~~~---~-~~~~iNg~sf~~p~~p~l~~~~~~~~~~~----------------------~~~~~~~v~~ 73 (199)
T d1gyca3 20 GGVDKALNLAFNFN---G-TNFFINNASFTPPTVPVLLQILSGAQTAQ----------------------DLLPAGSVYP 73 (199)
T ss_dssp TCSSEEEECCEEEC---S-SCEEETTBCCCCCSSCHHHHHHTTCCSTT----------------------TSSSTTSEEE
T ss_pred CCccEEEEEEEecc---c-ceEEECCEecCCCCcchHHHHhcCCCCcc----------------------cccccCceEE
Confidence 44566666555432 2 36999999999999888876553322111 1233445789
Q ss_pred ccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEe---CCCcEEEEEEEc
Q 012467 333 LGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVI---FPYGWTALRFVA 409 (463)
Q Consensus 333 ~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v---~~~g~~~irf~a 409 (463)
++.++++++++.|.... ....||||||||+|+||+++.+.. +++.+|.+|||+.+ ++|+|++|||+|
T Consensus 74 ~~~~~~~eiv~~~~~~~---~~~~HP~HlHG~~F~vv~~~~~~~-------~~~~~p~~rdt~~~~~~~~g~~~~irf~a 143 (199)
T d1gyca3 74 LPAHSTIEITLPATALA---PGAPHPFHLHGHAFAVVRSAGSTT-------YNYNDPIFRDVVSTGTPAAGDNVTIRFQT 143 (199)
T ss_dssp ECTTCEEEEEEECCTTS---CSCSCEEEETTCCEEEEECTTCCC-------CCSSSCCEESEEECCCGGGTCEEEEEEEC
T ss_pred eccCceeEEEeeccccc---CCCceeeeecCCcEEEEeecCCCc-------cCccCcccccceeeeccCCCcEEEEEEEC
Confidence 99999999999986543 123799999999999999875543 46788999999877 799999999999
Q ss_pred CCceeeeecccchHhHHccceeeeeccccccc---cCCCCCc-cccCcccCCC
Q 012467 410 DNPGAWAFHCHIEPHFHIGMGVVLALGVETVG---NIPNQAL-ACGLTGKRFM 458 (463)
Q Consensus 410 dnpG~w~~HCHi~~H~~~GM~~~~~~~~~~~~---~~P~~~~-~C~~~~~~~~ 458 (463)
||||.|+|||||++|++.|||++|+|++++++ ++|+.+. .|+.|..++.
T Consensus 144 dnpG~w~~HCHi~~H~~~GM~~~~~~~~~~~~~~~~~p~~~~~~C~~~~~~~~ 196 (199)
T d1gyca3 144 DNPGPWFLHCHIDFHLEAGFAIVFAEDVADVKAANPVPKAWSDLCPIYDGLSE 196 (199)
T ss_dssp CSCEEEEEEESSHHHHHTTCEEEEEETHHHHHHHCCCCHHHHHHHHHHHTCCG
T ss_pred CCCeeEEEEcCchhhHhccCcEEEEEcCCcccccCCCCHHHHhhhhhhcccCc
Confidence 99999999999999999999999999988765 4566655 7999976544
|
| >d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=100.00 E-value=2e-34 Score=262.59 Aligned_cols=175 Identities=27% Similarity=0.425 Sum_probs=127.0
Q ss_pred ccceEEEEEeeeeccCCeEEEEEecccCC-CCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEE
Q 012467 254 NFHRRLTLLNTQNTINGFTKWAINNVSLT-LPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYM 332 (463)
Q Consensus 254 ~~d~~~~~~~~~~~~~~~~~~~iNg~~~~-~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (463)
..|+++.+.+.... .....|.|||.+|. .+..|.|.....+.. .+ + ....++.
T Consensus 11 ~~d~t~~~~~~~~g-~~~~~w~iNg~s~~~d~~~P~L~~~~~~~~-~~-----~-------------------~~~~~~~ 64 (216)
T d2q9oa3 11 RPDNTLPVALDLTG-TPLFVWKVNGSDINVDWGKPIIDYILTGNT-SY-----P-------------------VSDNIVQ 64 (216)
T ss_dssp CGGGEEEEEEECSS-SSSCEEEETTBCCCCCTTSCHHHHHHHTCC-CC-----C-------------------GGGCEEE
T ss_pred CCCccEEEEEEeCC-CcEEEEEECCEecccCCCCCChhhhhcCCc-cc-----c-------------------cccceee
Confidence 34677776665432 23367999999986 457787765442211 01 0 0112355
Q ss_pred ccCCC-EEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcc----------ccccCCCCCCCccceEEeCCCc
Q 012467 333 LGLNT-TVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKE----------DEKKFNLKNPPLKNTAVIFPYG 401 (463)
Q Consensus 333 ~~~g~-~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~----------~~~~~n~~~p~~rDTv~v~~~g 401 (463)
+.... +..+++++.... .....||||||||+||||+++.+.+... ....+|+.+|+||||+.|+++|
T Consensus 65 ~~~~~~~~~~~i~~~~~n--~~~~~HP~HlHG~~F~Vlg~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~~rDTv~v~~~g 142 (216)
T d2q9oa3 65 VDAVDQWTYWLIENDPEG--PFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGG 142 (216)
T ss_dssp ECCSSCEEEEEEEECTTS--SCCCCEEEEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTS
T ss_pred ccccccceeEEEEeccCC--ccccccceeecCceEEEEeecCCCCCcccccccccccccccccccCCCceeceEEeCCCC
Confidence 55544 444444443211 1233899999999999999998876543 2356899999999999999999
Q ss_pred EEEEEEEcCCceeeeecccchHhHHccceeeeeccccccccC-----C-CCCccccCcccC
Q 012467 402 WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNI-----P-NQALACGLTGKR 456 (463)
Q Consensus 402 ~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~~~~~~~-----P-~~~~~C~~~~~~ 456 (463)
|++|||++||||.|+|||||++|++.|||++|+|+++++++. | ...+.|+.|+.+
T Consensus 143 ~~~ir~~adnpG~Wl~HCHi~~H~~~GM~~~~~~~p~~~~~~~~~~~~~~~~~~C~~w~~~ 203 (216)
T d2q9oa3 143 WLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLERPADLRQRISQEDEDDFNRVCDEWRAY 203 (216)
T ss_dssp EEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHHHHGGGCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECCCCeEEEEEccCCcccccCCeEEEEEcchhhhhcccCCCchhhhccChhhccc
Confidence 999999999999999999999999999999999999988763 3 346899998773
|
| >d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=99.97 E-value=1.4e-31 Score=230.78 Aligned_cols=100 Identities=21% Similarity=0.164 Sum_probs=83.6
Q ss_pred EEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcc----------ccccCCCCCCCccceEEeCCC
Q 012467 331 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKE----------DEKKFNLKNPPLKNTAVIFPY 400 (463)
Q Consensus 331 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~----------~~~~~n~~~p~~rDTv~v~~~ 400 (463)
..++.|++++|.|.|.+.+ .|||||||++||||+++.+.+... ........++.||||+.|+++
T Consensus 43 ~~~~~G~~e~W~i~N~~~~------~HP~HiHg~~F~Vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~v~pg 116 (154)
T d1gska3 43 ETPKVGTTEIWSIINPTRG------THPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPSEKGWKDTIQAHAG 116 (154)
T ss_dssp BCCBTTCEEEEEEEECSSS------CEEEEESSCCEEEEEEEEBCHHHHHHHCCCCBSSCCBCCCGGGSSCBSEEEECTT
T ss_pred cccCCCCEEEEEEEeCCCC------CCCEEECCceEEEEEecCCCcccccccccccccCCCcCCCcccCcccccEEeCCC
Confidence 4568999999999999877 899999999999999876543221 112223445679999999999
Q ss_pred cEEEEEEE-cCCceeeeecccchHhHHccceeeeecc
Q 012467 401 GWTALRFV-ADNPGAWAFHCHIEPHFHIGMGVVLALG 436 (463)
Q Consensus 401 g~~~irf~-adnpG~w~~HCHi~~H~~~GM~~~~~~~ 436 (463)
++++|||+ +||||.|+|||||++|++.|||+.|.+.
T Consensus 117 ~~~~i~~~~~d~pG~w~~HCHil~Hed~GMM~~~~V~ 153 (154)
T d1gska3 117 EVLRIAATFGPYSGRYVWHCHILEHEDYDMMRPMDIT 153 (154)
T ss_dssp EEEEEEEECCSCCEEEEEEESCHHHHTTTCEEEEEEB
T ss_pred CEEEEEEEeCCCCcceEEecCcchHhhCcCceEEEEe
Confidence 99999998 7999999999999999999999999754
|
| >d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=99.94 E-value=2.9e-27 Score=207.56 Aligned_cols=92 Identities=20% Similarity=0.349 Sum_probs=77.5
Q ss_pred EEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcE-EEEEEEc
Q 012467 331 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGW-TALRFVA 409 (463)
Q Consensus 331 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~-~~irf~a 409 (463)
+.++.|++|+|+|.|.+.+. .|||||||+.|+|++++.+... ..++.|||||.|+++++ ++|+|.+
T Consensus 87 ~~~~~G~~erw~i~N~~~~~-----~HP~HlHG~~F~Vl~~~g~~~~--------~~~~~~kDTv~v~~~~~~v~v~f~~ 153 (181)
T d1kv7a3 87 FAAAKGQYERWVISGVGDMM-----LHPFHIHGTQFRILSENGKPPA--------AHRAGWKDTVKVEGNVSEVLVKFNH 153 (181)
T ss_dssp EECCSSSCEEEEEECTTCCC-----CEEEEETTCCBEEEEBTTBCCC--------GGGSSSBSEEEESSSEEEEEECCCS
T ss_pred eEeCCCCEEEEEEEeCCCCC-----ccCceEeceEEEEEecccCCcc--------ccCCcceeEEEeCCCceEEEEEEEe
Confidence 88999999999999987531 8999999999999998655443 23468999999998764 5788876
Q ss_pred C--CceeeeecccchHhHHccceeeeec
Q 012467 410 D--NPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 410 d--npG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
+ ++|.|+||||+++|++.|||+.|.+
T Consensus 154 ~~~~~G~w~fHCHil~H~d~GMm~~f~V 181 (181)
T d1kv7a3 154 DAPKEHAYMAHCHLLEHEDTGMMLGFTV 181 (181)
T ss_dssp CCCGGGCEEEEESSHHHHHTTCEEEEEC
T ss_pred eCCCCCeEEEeCChHHHHhCCCCEEEEC
Confidence 5 4699999999999999999999864
|
| >d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=99.90 E-value=2.2e-23 Score=182.31 Aligned_cols=121 Identities=17% Similarity=0.266 Sum_probs=95.9
Q ss_pred CCcceEEEEeeeecccHHHHHhhhcCCC---------CCCCCCCCeEEECCCCCCCCccccccCCCCccccccCCCCCCC
Q 012467 44 YDGEFNLLLSDWWHRSVHEQEVGLSSRP---------LRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCA 114 (463)
Q Consensus 44 ~d~e~~l~l~D~~~~~~~~~~~~~~~~~---------~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~ 114 (463)
.|.|++|+|+||+++..+++........ ......+|.+||||+..+
T Consensus 5 gd~Diplvl~D~~~~~dg~l~~~~~~~~~~~~~~~~~~~~g~~Gd~~lvNG~~~p------------------------- 59 (174)
T d1gska2 5 DEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVWP------------------------- 59 (174)
T ss_dssp GGGEEEEEEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEESC-------------------------
T ss_pred CCCCEEEEeEecccCCCCCEEeeccccCCCcCCcccccccCccCCeEEecCccce-------------------------
Confidence 4679999999999988776643221110 000235689999999775
Q ss_pred ceEEEecCCCeEEEEEEecCcceEEEEEEe-CceeEEEEeCCccc-ceeeEeeEEecCCceEEEEEecCCCCCCceEEEE
Q 012467 115 PQILHVQPNKTYRLRIASTTALASLNLAVK-NHKMVVVEADGNYV-QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA 192 (463)
Q Consensus 115 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~-~h~~~via~DG~~v-~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~ 192 (463)
.++|++ ++|||||||||+.+.+.|+|+ +|+|+|||+||+++ +|+.++.|.|+|||||||+|++++. .|.+++..
T Consensus 60 --~~~v~~-~~~RlRliNa~~~~~~~l~~~~g~~~~vIa~DG~~l~~P~~~~~l~l~pgeR~dvlv~~~~~-~g~~~~l~ 135 (174)
T d1gska2 60 --YLEVEP-RKYRFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAY-EGESIILA 135 (174)
T ss_dssp --EEECCS-SEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGG-TTCEEEEE
T ss_pred --EEEecC-ceEEEEEEecccCceeeEeecCCCcEEEEEECCCcccCceEeCEEEEcCCcEEEEEEECCCC-CCceEEEE
Confidence 677765 689999999999999999995 78999999999999 6999999999999999999999874 45555444
Q ss_pred E
Q 012467 193 G 193 (463)
Q Consensus 193 ~ 193 (463)
.
T Consensus 136 ~ 136 (174)
T d1gska2 136 N 136 (174)
T ss_dssp E
T ss_pred c
Confidence 3
|
| >d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=99.90 E-value=7.7e-24 Score=183.62 Aligned_cols=122 Identities=21% Similarity=0.270 Sum_probs=94.9
Q ss_pred CCCC-CcceEEEEeeeecccHHHHHhhhcCCCCCCCCCCCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEE
Q 012467 41 PFHY-DGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILH 119 (463)
Q Consensus 41 p~~~-d~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~ 119 (463)
|-.| ..|++|+|+||+++..+++..............+|.+||||+..+ ++.
T Consensus 3 P~~yg~ddiplvi~D~~~~~~g~~~~~~~~~~~~~g~~gd~~lvNG~~~p---------------------------~~~ 55 (165)
T d1kv7a2 3 PKQWGIDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIYP---------------------------QHA 55 (165)
T ss_dssp CCCBTTTEEEEEEEEECBCTTSSBCCCCCHHHHHHCCCCSEEEETTBSSC---------------------------EEE
T ss_pred CCCCCCCcEeEEeEcccCCCCCCCccCCCCcccCCCccCCEEEEcCcccc---------------------------eEe
Confidence 4456 368999999999887655422111000000236799999999765 566
Q ss_pred ecCCCeEEEEEEecCcceEEEEEE-eCceeEEEEeCCccc-ceeeEeeEEecCCceEEEEEecCCCCCCceEEEE
Q 012467 120 VQPNKTYRLRIASTTALASLNLAV-KNHKMVVVEADGNYV-QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA 192 (463)
Q Consensus 120 v~~g~~~RlRliNa~~~~~~~~~i-~~h~~~via~DG~~v-~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~ 192 (463)
++ |++|||||||||+.+.++|++ +||+|+|||.||+++ +|+.++.+.|+|||||||+|++++ .+.+.++.
T Consensus 56 ~~-~~~~RlR~iNa~~~~~~~~~~~~g~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~--~~~~~~~~ 127 (165)
T d1kv7a2 56 AP-RGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVND--NKPFDLVT 127 (165)
T ss_dssp EE-EEEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEEECT--TCCEEEEE
T ss_pred cc-CcEEEEEEEEcccCceeeEEecCCCeEEEEEeCCccccCceEeCeEEECCCCEEEEEEECCC--CCcEEEEE
Confidence 65 679999999999999999998 689999999999999 799999999999999999999987 34555444
|
| >d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=2.7e-24 Score=184.41 Aligned_cols=87 Identities=28% Similarity=0.531 Sum_probs=77.0
Q ss_pred EEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcC
Q 012467 331 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 410 (463)
Q Consensus 331 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~ad 410 (463)
+.++.|++|+|.|.|.+.. ...||||+||+.|.+...+ +.+|||+.|+||++++++|+++
T Consensus 62 l~v~~Gd~v~~~l~n~g~~----~~~h~~H~HG~~f~~~~~g----------------~~~~dtv~i~pg~~~~~~~~a~ 121 (149)
T d2j5wa5 62 LTMHVGDEVNWYLMGMGNE----IDLHTVHFHGHSFQYKHRG----------------VYSSDVFDIFPGTYQTLEMFPR 121 (149)
T ss_dssp CEEETTCEEEEEEEECCST----TCCEEEEESSCCEEETTTT----------------CEEESEEEECTTCEEEEEECCC
T ss_pred eEEEcCCcEEEEEEecCCC----CCccceEEEeeEeeeeccC----------------CCCcceEEECCCceEEEEEeCC
Confidence 6789999999999997643 2389999999999986542 3689999999999999999999
Q ss_pred CceeeeecccchHhHHccceeeeeccc
Q 012467 411 NPGAWAFHCHIEPHFHIGMGVVLALGV 437 (463)
Q Consensus 411 npG~w~~HCHi~~H~~~GM~~~~~~~~ 437 (463)
+||.|+||||++.|++.|||+.|.+-+
T Consensus 122 ~pG~w~~HCHi~~H~~~GM~~~f~V~~ 148 (149)
T d2j5wa5 122 TPGIWLLHCHVTDHIHAGMETTYTVLQ 148 (149)
T ss_dssp SCEEEEEEECCHHHHHTTCEEEEEEEC
T ss_pred CCeeEEEEcCCHHHHhccCceEEEEec
Confidence 999999999999999999999997643
|
| >d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.87 E-value=9.5e-23 Score=172.46 Aligned_cols=85 Identities=20% Similarity=0.297 Sum_probs=75.0
Q ss_pred EEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcC
Q 012467 331 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 410 (463)
Q Consensus 331 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~ad 410 (463)
+.+..|+.|+|.|.|.+.. ...||||+||+.|.+.+.+ +.++||+.|+||++.+++|+++
T Consensus 54 ~~v~~gd~v~~~l~n~g~~----~~~h~iH~HG~~f~~~~~~----------------~~~~dt~~i~pg~~~t~~~~~~ 113 (139)
T d1sddb2 54 LRMYEQEWVRLHLLNLGGS----RDIHVVHFHGQTLLENGTQ----------------QHQLGVWPLLPGSFKTLEMKAS 113 (139)
T ss_dssp CEEETTCEEEEEEEECCCT----TCCEEEEETTCCEEECSSS----------------CEEESSEEECTTEEEEEEEECC
T ss_pred cccccCCcEEEEEEecCCC----CCcccEEEcceEEEeccCC----------------CCcCCeEEECCCCEEEEEEecC
Confidence 5678899999999997643 2379999999999886542 3688999999999999999999
Q ss_pred CceeeeecccchHhHHccceeeeec
Q 012467 411 NPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 411 npG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
+||.|+||||++.|++.||++.|.+
T Consensus 114 ~pG~w~~HcH~~~H~~~GM~~~~~V 138 (139)
T d1sddb2 114 KPGWWLLDTEVGEIQRAGMQTPFLI 138 (139)
T ss_dssp SSEEEEEECCCHHHHTTTCEEEEEE
T ss_pred CCEeEEEEeCCHHHHhccCcEEEEE
Confidence 9999999999999999999999864
|
| >d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.87 E-value=1e-22 Score=173.51 Aligned_cols=83 Identities=20% Similarity=0.328 Sum_probs=74.7
Q ss_pred EEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcC
Q 012467 331 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 410 (463)
Q Consensus 331 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~ad 410 (463)
+.++.|++|+|.|.|.+.. ...||||+||+.|++.+ .++||+.|+||++++++|+|+
T Consensus 61 l~v~~Gd~v~~~l~n~g~~----~~~h~iH~hG~~f~~~~-------------------~~~dt~~i~pg~~~t~~~~a~ 117 (145)
T d2j5wa2 61 LTMCKGDSVVWYLFSAGNE----ADVHGIYFSGNTYLWRG-------------------ERRDTANLFPQTSLTLHMWPD 117 (145)
T ss_dssp CEEETTCCEEEEEECCCST----TCCEEEEETTCCEEETT-------------------EEESEEEECTTCEEEEEECCC
T ss_pred eEEEcCCeEEEEEEecCCC----CcccceEecccEEEecc-------------------cCccceEECCCCEEEEEEEcC
Confidence 7789999999999997644 23799999999998743 478999999999999999999
Q ss_pred CceeeeecccchHhHHccceeeeecc
Q 012467 411 NPGAWAFHCHIEPHFHIGMGVVLALG 436 (463)
Q Consensus 411 npG~w~~HCHi~~H~~~GM~~~~~~~ 436 (463)
+||.|+||||++.|++.||++.|.+.
T Consensus 118 ~pG~w~~HCH~~~H~~~GM~~~~~V~ 143 (145)
T d2j5wa2 118 TEGTFNVECLTTDHYTGGMKQKYTVN 143 (145)
T ss_dssp SCEEEEEEECSHHHHHTTCEEEEEEE
T ss_pred CCEeEEEEcCCHHHHhCCCeEEEEEe
Confidence 99999999999999999999999764
|
| >d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.85 E-value=1.1e-23 Score=172.50 Aligned_cols=80 Identities=15% Similarity=0.208 Sum_probs=57.6
Q ss_pred EEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcC
Q 012467 331 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 410 (463)
Q Consensus 331 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~ad 410 (463)
+.++.|++|+|.|.|.+.. ...||||+||+.|++.+ .++||+.|+||+..+++|+++
T Consensus 37 ~~v~~Gd~v~~~v~n~g~~----~~~h~iH~Hg~~f~~~~-------------------~~~dtv~i~pg~~~~v~~~a~ 93 (116)
T d1sdda2 37 ITVCAHDHISWHLIGMSSG----PELFSIHFNGQVLEQNH-------------------HKISAITLVSATSTTANMTVS 93 (116)
T ss_dssp CCCCCC------BBCCCSS----SCEECCBCSSTTCEETT-------------------EECSCCCEETTCCBC------
T ss_pred eEEeCCCEEEEEEeccccC----CCceeEEEeccccccCC-------------------cccceEeecccEEEEEEEEcC
Confidence 6789999999999997643 23799999999998743 579999999999999999999
Q ss_pred CceeeeecccchHhHHccceeee
Q 012467 411 NPGAWAFHCHIEPHFHIGMGVVL 433 (463)
Q Consensus 411 npG~w~~HCHi~~H~~~GM~~~~ 433 (463)
+||.|+||||++.|++.||++.+
T Consensus 94 ~pG~w~~HCH~~~H~~~GM~a~i 116 (116)
T d1sdda2 94 PEGRWTIASLIPRHFQAGMQAYI 116 (116)
T ss_dssp --CCCCCBCCSTTTGGGTCBCCC
T ss_pred CCeEEEEEcCCHHHHHccceecC
Confidence 99999999999999999999864
|
| >d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.84 E-value=1.8e-21 Score=166.19 Aligned_cols=83 Identities=20% Similarity=0.347 Sum_probs=74.2
Q ss_pred EEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcC
Q 012467 331 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 410 (463)
Q Consensus 331 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~ad 410 (463)
+.++.|++|+|.|.|.+.. ...||||+||+.|.+ ++.++||+.|+||++.+++|+++
T Consensus 62 l~~~~gd~v~~~l~n~g~~----~~~h~~H~hg~~~~~-------------------~~~~~dt~~i~pg~~~~v~f~~~ 118 (146)
T d1kcwa2 62 LSMCAEDRVKWYLFGMGNE----VDVHAAFFHGQALTN-------------------KNYRIDTINLFPATLFDAYMVAQ 118 (146)
T ss_dssp CEEETTEEEEEEEECCCST----TCCEEEEETTSCCCC-------------------SSSCCSEEEECTTCEEEEEEEEC
T ss_pred ceEecCCeEEEEEEEcCCC----CcccceEeeeeeeec-------------------cCCCcceEEecCCCEEEEEEEcC
Confidence 7889999999999997643 237999999998853 24789999999999999999999
Q ss_pred CceeeeecccchHhHHccceeeeecc
Q 012467 411 NPGAWAFHCHIEPHFHIGMGVVLALG 436 (463)
Q Consensus 411 npG~w~~HCHi~~H~~~GM~~~~~~~ 436 (463)
+||.|+||||++.|++.||++.|.+.
T Consensus 119 ~pG~w~~HCH~~~H~~~GM~~~~~V~ 144 (146)
T d1kcwa2 119 NPGEWMLSCQNLNHLKAGLQAFFQVQ 144 (146)
T ss_dssp SCEEEEEEECCHHHHHTCCEEEEEEE
T ss_pred CCeeEEEEcCCHHHHhcCCeEEEEEE
Confidence 99999999999999999999999764
|
| >d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Probab=99.83 E-value=5.2e-21 Score=163.53 Aligned_cols=92 Identities=17% Similarity=0.133 Sum_probs=76.6
Q ss_pred EEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcC
Q 012467 331 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 410 (463)
Q Consensus 331 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~ad 410 (463)
++++.|++|+|.|.|.... ..||||+||+.|+++... |...+ ...+||+.|+||++.+++|+++
T Consensus 53 l~~~~Ge~vri~v~N~~~~-----~~~~~H~hG~~f~~v~~~-G~~~~----------~~~~~T~~v~pg~~~~~~f~a~ 116 (151)
T d1kbva2 53 LKAKAGETVRMYVGNGGPN-----LVSSFHVIGEIFDKVYVE-GGKLI----------NENVQSTIVPAGGSAIVEFKVD 116 (151)
T ss_dssp EEEETTEEEEEEEEEEESS-----CCEEEEEETCCBSEEEGG-GSSCE----------ECSBSEEEECTTEEEEEEEEEC
T ss_pred eEEEeCCeEEEEEEcCCcc-----ccccceeecceeeEEecC-CCcCC----------cccceeEecccCceeEEeeecC
Confidence 8899999999999996432 189999999999999764 33321 2468999999999999999999
Q ss_pred CceeeeecccchH-hHHccceeeeecccc
Q 012467 411 NPGAWAFHCHIEP-HFHIGMGVVLALGVE 438 (463)
Q Consensus 411 npG~w~~HCHi~~-H~~~GM~~~~~~~~~ 438 (463)
+||.|+||||.+. |++.||+++|.+..+
T Consensus 117 ~PG~y~~h~H~l~~~~~~G~~g~~~V~~~ 145 (151)
T d1kbva2 117 IPGNYTLVDHSIFRAFNKGALGQLKVEGA 145 (151)
T ss_dssp SCEEEEEEESSTHHHHHSSCEEEEEEESC
T ss_pred CCceEEEECCcHHHHHhccCeEEEEEcCC
Confidence 9999999999764 578999999976543
|
| >d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.69 E-value=3e-17 Score=140.55 Aligned_cols=89 Identities=25% Similarity=0.204 Sum_probs=74.4
Q ss_pred eEEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCcc--ceEEeCCCcEEEEE
Q 012467 329 GVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLK--NTAVIFPYGWTALR 406 (463)
Q Consensus 329 ~~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~r--DTv~v~~~g~~~ir 406 (463)
..++++.|++|.|+..|.+ . .|+|||||++|.++.. +|.+. +++.+ +|+.|++|+.+++.
T Consensus 66 ~~l~akvGErV~i~~~~~n-~------~s~fHliG~hFD~V~~-~G~~~----------~~p~~~~qTv~VppG~a~~ve 127 (173)
T d2bw4a2 66 HALTAAVGERVLVVHSQAN-R------DTRPHLIGGHGDYVWA-TGKFR----------NPPDLDQETWLIPGGTAGAAF 127 (173)
T ss_dssp GCEEEETTCEEEEEEEESS-S------CBCEEEETCCEEEEET-TCCTT----------SCCEEEESCCCBCTTEEEEEE
T ss_pred cCcccccCCeEEEEecCCC-C------CccceeccceeEEECC-CCccc----------CCCcCCceeEEccCCccEEEE
Confidence 3499999999987665554 3 7999999999999976 55542 34545 59999999999999
Q ss_pred EEcCCceeeeecccc-hHhHHccceeeeec
Q 012467 407 FVADNPGAWAFHCHI-EPHFHIGMGVVLAL 435 (463)
Q Consensus 407 f~adnpG~w~~HCHi-~~H~~~GM~~~~~~ 435 (463)
|++++||.|+||||. ..|++.||+++|.+
T Consensus 128 ~~f~~PG~y~~v~H~l~ea~~~G~~g~l~V 157 (173)
T d2bw4a2 128 YTFRQPGVYAYVNHNLIEAFELGAAGHFKV 157 (173)
T ss_dssp EECCSCEEEEEEESSHHHHHTTSCEEEEEE
T ss_pred EEecCceEEEEEechHHHHHhCCCEEEEEE
Confidence 999999999999996 57899999999964
|
| >d1oe1a2 b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.60 E-value=1.4e-15 Score=129.80 Aligned_cols=89 Identities=25% Similarity=0.238 Sum_probs=74.9
Q ss_pred eEEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccc--eEEeCCCcEEEEE
Q 012467 329 GVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKN--TAVIFPYGWTALR 406 (463)
Q Consensus 329 ~~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rD--Tv~v~~~g~~~ir 406 (463)
..++++.|++|+|+..+. .. .++|||||..|..+-. .|.+ .+++.+| |+.|++|+.+++.
T Consensus 66 ~~l~akvGe~Vri~~~~~-N~------~ssfHlIG~hfD~V~~-~G~~----------~n~p~~~~qT~~V~pG~~~~v~ 127 (177)
T d1oe1a2 66 NALTAKVGETVLLIHSQA-NR------DTRPHLIGGHGDWVWE-TGKF----------ANPPQRDLETWFIRGGSAGAAL 127 (177)
T ss_dssp GCEEEETTCEEEEEEEES-SS------CBCEEETTCCEEEEET-TCCT----------TSCCEEEESBCCBCTTEEEEEE
T ss_pred CCcccccCCeEEEEecCC-CC------CccceecccccceEcc-CCee----------CCCCCcCceeEEecCCccEEEE
Confidence 348999999999865433 34 8999999999998875 5554 3566775 9999999999999
Q ss_pred EEcCCceeeeecccch-HhHHccceeeeec
Q 012467 407 FVADNPGAWAFHCHIE-PHFHIGMGVVLAL 435 (463)
Q Consensus 407 f~adnpG~w~~HCHi~-~H~~~GM~~~~~~ 435 (463)
|++++||.|+||||.+ .|++.|||++|.+
T Consensus 128 ~tf~~PG~Y~fV~H~L~ea~~~Ga~g~l~V 157 (177)
T d1oe1a2 128 YTFKQPGVYAYLNHNLIEAFELGAAGHIKV 157 (177)
T ss_dssp EECCSCEEEEEEESSHHHHHTTSCEEEEEE
T ss_pred EEecCceEEEEEecHHHHHHhcCCeEEEEe
Confidence 9999999999999965 6899999999954
|
| >d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Rusticyanin species: Thiobacillus ferrooxidans [TaxId: 920]
Probab=99.51 E-value=7.5e-15 Score=125.57 Aligned_cols=91 Identities=15% Similarity=0.038 Sum_probs=73.9
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEE-
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFV- 408 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~- 408 (463)
.+.++.|++|+|.|.|.+.. ..||||||++.+.+...+.... ..+...++..+.+|+...++|+
T Consensus 61 ti~v~~Gd~V~i~v~N~~~~-----~~H~~~ih~~g~~~~~~~~~~~----------~~~~~~~~~~v~pg~~~~~~f~~ 125 (153)
T d1e30a_ 61 TLEIPAGATVDVTFINTNKG-----FGHSFDITKKGPPYAVMPVIDP----------IVAGTGFSPVPKDGKFGYTNFTW 125 (153)
T ss_dssp EEEECTTCEEEEEEEECCTT-----CCCCCEEESCCSSCCSSCCCCS----------EEEEBCCCCCCBTTEEEEEEEEE
T ss_pred eEEEeCCCEEEEEEEeCCCC-----CcccEEEEcCCCCccccccccc----------cCCCccceeeecCCCEEEEEEEe
Confidence 48999999999999997532 1899999999876655432111 1235678888999999999997
Q ss_pred cCCceeeeecccchHhHHccceeeeec
Q 012467 409 ADNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 409 adnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
+++||.|.||||+..|+..||++.|.+
T Consensus 126 ~~~pGty~YhCh~~~H~~~GM~G~iiV 152 (153)
T d1e30a_ 126 HPTAGTYYYVCQIPGHAATGQFGKIVV 152 (153)
T ss_dssp CCCSEEEEEECCSTTTTTTTCEEEEEE
T ss_pred CCCCeEEEEeCCchhHHHCCCEEEEEE
Confidence 688999999999999999999998865
|
| >d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=99.42 E-value=4.4e-13 Score=110.59 Aligned_cols=88 Identities=23% Similarity=0.177 Sum_probs=65.4
Q ss_pred EEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcC
Q 012467 331 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 410 (463)
Q Consensus 331 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~ad 410 (463)
+.++.|+.|+|.|.|.... ..+.+|.||..+......++ ....+...|.||+..+++|.++
T Consensus 36 i~v~~GD~v~i~l~N~l~~-----~~~~iH~Hg~~~~~~~~~~~--------------~~~~~~~~I~PG~s~~y~f~a~ 96 (129)
T d1aoza1 36 IRANAGDSVVVELTNKLHT-----EGVVIHWHGILQRGTPWADG--------------TASISQCAINPGETFFYNFTVD 96 (129)
T ss_dssp EEEETTCEEEEEEEECCSS-----CCBCEEEETCCCTTCGGGSC--------------CBTTTBCCBCTTCEEEEEEECC
T ss_pred EEEECCcEEEEEEEeCCCC-----CCeeeeeccceeeccCcccc--------------ccccccceECCCCEEEEEEECC
Confidence 8899999999999996432 15666777665321111111 1223445689999999999999
Q ss_pred CceeeeecccchHhHHccceeeeeccc
Q 012467 411 NPGAWAFHCHIEPHFHIGMGVVLALGV 437 (463)
Q Consensus 411 npG~w~~HCHi~~H~~~GM~~~~~~~~ 437 (463)
+||.|+||||+..|...||++.|++.+
T Consensus 97 ~~Gt~~YH~H~~~h~~~Gm~G~~iV~~ 123 (129)
T d1aoza1 97 NPGTFFYHGHLGMQRSAGLYGSLIVDP 123 (129)
T ss_dssp SCEEEEEEECSTTTGGGTCEEEEEEEC
T ss_pred CCCceEEecCCHHHHhCCCEEEEEEcC
Confidence 999999999999999999998887654
|
| >d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=99.34 E-value=3.9e-12 Score=108.93 Aligned_cols=89 Identities=17% Similarity=0.171 Sum_probs=69.7
Q ss_pred EEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcC
Q 012467 331 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 410 (463)
Q Consensus 331 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~ad 410 (463)
+.++.|+.|+|.+.|.... ..+.+|+||..+......+|. +.......+++|++..++|+++
T Consensus 69 I~~~~Gd~v~v~l~N~l~~-----~~~~ih~Hg~~~~~~~~~~g~-------------~~~~~~~i~~pg~~~~y~f~~~ 130 (162)
T d2q9oa1 69 IVANWGDTVEVTVINNLVT-----NGTSIHWHGIHQKDTNLHDGA-------------NGVTECPIPPKGGQRTYRWRAR 130 (162)
T ss_dssp EEEETTCEEEEEEEEECSS-----CCBCEEEETCCCTTCGGGSCC-------------BTTTBCCBCTTTEEEEEEEECC
T ss_pred EEEECCcEEEEEEEecCcc-----cccccccccccccCCCcCCCC-------------cccccceecCCCCEEEeeecCC
Confidence 8899999999999996432 178999999976543322221 1223344578899999999999
Q ss_pred CceeeeecccchHhHHccceeeeeccc
Q 012467 411 NPGAWAFHCHIEPHFHIGMGVVLALGV 437 (463)
Q Consensus 411 npG~w~~HCHi~~H~~~GM~~~~~~~~ 437 (463)
++|.|+||||+..|...||.+.|++.+
T Consensus 131 ~~Gt~wYH~H~~~q~~~Gl~G~~iV~~ 157 (162)
T d2q9oa1 131 QYGTSWYHSHFSAQYGNGVVGTIQING 157 (162)
T ss_dssp SCEEEEEEECSTTGGGGTCEEEEEEEC
T ss_pred CCEEEEeecCCHHHHhCCCEEEEEECC
Confidence 999999999999999999998887654
|
| >d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Probab=99.31 E-value=1.1e-12 Score=111.06 Aligned_cols=142 Identities=17% Similarity=0.164 Sum_probs=103.8
Q ss_pred CcceEEEEeeeecccHHHHH--hhhcCCCCCCCCCCCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecC
Q 012467 45 DGEFNLLLSDWWHRSVHEQE--VGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQP 122 (463)
Q Consensus 45 d~e~~l~l~D~~~~~~~~~~--~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~ 122 (463)
|+|++|+.+|||......-. ..+..... ....++.+++||+... . .....|+++.
T Consensus 1 Drey~l~~~e~Y~~~~~~~~~~~~~d~~~~-~~~~p~~~~fNG~~~~---~-------------------t~~~~l~~~~ 57 (151)
T d1kbva2 1 DKEFYIVQGDFYTKGKKGAQGLQPFDMDKA-VAEQPEYVVFNGHVGA---L-------------------TGDNALKAKA 57 (151)
T ss_dssp SEEEEEEEEEECBSSCTTCCEEECBCHHHH-HHTCCSEEEETTSTTT---T-------------------SGGGCEEEET
T ss_pred CceEEEeccEEecCCcCCCCcCCccCHhHH-hcCCCcEEEECCccCC---c-------------------cCccceEEEe
Confidence 78999999999975322100 00000000 0235788999998753 0 0112488999
Q ss_pred CCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCCCCC
Q 012467 123 NKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATP 202 (463)
Q Consensus 123 g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~~~~ 202 (463)
|+++||+|+|++......|++.|+.|.++..||........+++.|+||+++++.+++++ +|.|++........ ...
T Consensus 58 Ge~vri~v~N~~~~~~~~~H~hG~~f~~v~~~G~~~~~~~~~T~~v~pg~~~~~~f~a~~--PG~y~~h~H~l~~~-~~~ 134 (151)
T d1kbva2 58 GETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEGGKLINENVQSTIVPAGGSAIVEFKVDI--PGNYTLVDHSIFRA-FNK 134 (151)
T ss_dssp TEEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSCEECSBSEEEECTTEEEEEEEEECS--CEEEEEEESSTHHH-HHS
T ss_pred CCeEEEEEEcCCccccccceeecceeeEEecCCCcCCcccceeEecccCceeEEeeecCC--CceEEEECCcHHHH-Hhc
Confidence 999999999998888899999999999999999988666679999999999999999997 69999987632110 123
Q ss_pred CeEEEEEeCC
Q 012467 203 PALTLLNYHP 212 (463)
Q Consensus 203 ~~~a~l~y~~ 212 (463)
...++|.+++
T Consensus 135 G~~g~~~V~~ 144 (151)
T d1kbva2 135 GALGQLKVEG 144 (151)
T ss_dssp SCEEEEEEES
T ss_pred cCeEEEEEcC
Confidence 5678888874
|
| >d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Probab=99.28 E-value=4.6e-12 Score=107.30 Aligned_cols=83 Identities=20% Similarity=0.275 Sum_probs=60.9
Q ss_pred EEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcC
Q 012467 331 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 410 (463)
Q Consensus 331 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~ad 410 (463)
++++.|++|+|.+.|.... ...|.+|+|+... +.+. ...+ .|.||++.+++|+++
T Consensus 60 i~v~~Gd~v~v~~~N~~~~----~~~H~~~~h~~~~-----~~~~--------------~~~~--~i~PG~t~~y~f~a~ 114 (151)
T d1kbva1 60 IRVREGDTVEVEFSNNPSS----TVPHNVDFHAATG-----QGGG--------------AAAT--FTAPGRTSTFSFKAL 114 (151)
T ss_dssp EEEETTCEEEEEEEECTTC----SSCBCCEETTCCS-----GGGG--------------TTTT--CBCTTEEEEEEEECC
T ss_pred EEEECCCEEEEEEEcCCCC----ceeeecccccccc-----CCCC--------------ccee--eeCCCCEEEEEEeCC
Confidence 8999999999999995322 1145666665432 1111 1122 267999999999999
Q ss_pred Cceeeeeccc---chHhHHccceeeeecccc
Q 012467 411 NPGAWAFHCH---IEPHFHIGMGVVLALGVE 438 (463)
Q Consensus 411 npG~w~~HCH---i~~H~~~GM~~~~~~~~~ 438 (463)
+||.|+|||| ...|.+.||++.+++.++
T Consensus 115 ~~Gt~~YH~H~~~~~~h~~~Gm~G~liV~p~ 145 (151)
T d1kbva1 115 QPGLYIYHCAVAPVGMHIANGMYGLILVEPK 145 (151)
T ss_dssp SCEEEEEECCCSSHHHHHHTTCEEEEEEECT
T ss_pred CCeEEEEECCCCChHHHHhCCCEEEEEEECC
Confidence 9999999999 457999999988876553
|
| >d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.27 E-value=5.8e-12 Score=107.35 Aligned_cols=83 Identities=25% Similarity=0.338 Sum_probs=64.4
Q ss_pred EEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcC
Q 012467 331 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 410 (463)
Q Consensus 331 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~ad 410 (463)
++++.|++|+|.|.|.... .-.|.||+||..+.+ .|. .. -.|.||+..+++|+++
T Consensus 67 I~v~~Gd~v~v~~~N~~~~----~h~h~ih~hg~~~~~----~g~--------------~~---~~I~PG~t~ty~f~a~ 121 (159)
T d1oe2a1 67 LVVHEGDYVQLTLVNPATN----AMPHNVEFHGATGAL----GGA--------------KL---TNVNPGEQATLRFKAD 121 (159)
T ss_dssp EEEETTCEEEEEEEECTTC----CSCBCCEETTSCSGG----GGG--------------GG---CCBCTTEEEEEEEECC
T ss_pred EEEECCcEEEEEEECCCcc----ccccceeeccccCCC----CCc--------------cc---ccCCCCCeEEEEEEcC
Confidence 8999999999999996532 116888999875321 010 00 1378999999999999
Q ss_pred Cceeeeeccc----chHhHHccceeeeecccc
Q 012467 411 NPGAWAFHCH----IEPHFHIGMGVVLALGVE 438 (463)
Q Consensus 411 npG~w~~HCH----i~~H~~~GM~~~~~~~~~ 438 (463)
+||.|+|||| +..|...||.+.|++.+.
T Consensus 122 ~~Gt~~yH~H~~~~~~~q~~~Gl~G~liV~p~ 153 (159)
T d1oe2a1 122 RSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPR 153 (159)
T ss_dssp SCEEEEEECCCTTCHHHHHHTTCEEEEEEECT
T ss_pred CCceEEEEeCCCCCchhHHhCCCEEEEEEECC
Confidence 9999999999 678999999988877653
|
| >d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.26 E-value=3.3e-12 Score=108.29 Aligned_cols=83 Identities=24% Similarity=0.292 Sum_probs=64.3
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
+++++.|++|+|.+.|.... ...|.+|+||..... + -...-.|.||+..+++|++
T Consensus 63 ti~v~~Gd~v~i~~~N~~~~----~~~H~~~~h~~~~~~-----~----------------~~~~~~i~PG~t~ty~f~a 117 (153)
T d1mzya1 63 LMIVHEGDYVELTLINPPEN----TMPHNIDFHAATGAL-----G----------------GGGLTLINPGEKVVLRFKA 117 (153)
T ss_dssp EEEEETTCEEEEEEEECTTC----CSCBCCEETTSCSGG-----G----------------GGGGCCBCTTEEEEEEEEC
T ss_pred cEEEeCCCEEEEEEEcCCCC----ceEccCccccCCcCC-----C----------------CCccccccCCCEEEEEEEc
Confidence 48999999999999995322 127889999864211 0 0111247899999999999
Q ss_pred CCceeeeeccc-----chHhHHccceeeeeccc
Q 012467 410 DNPGAWAFHCH-----IEPHFHIGMGVVLALGV 437 (463)
Q Consensus 410 dnpG~w~~HCH-----i~~H~~~GM~~~~~~~~ 437 (463)
++||.|+|||| +..|...||.+.+++.+
T Consensus 118 ~~~Gt~~YH~H~~~~~~~~h~~~Gm~G~~iV~P 150 (153)
T d1mzya1 118 TRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLP 150 (153)
T ss_dssp CSCEEEEEECCCSTTHHHHHHHTTCEEEEEEEC
T ss_pred CCCceEEEEeCCcccccHhHHhCCCEEEEEEec
Confidence 99999999999 56799999998887654
|
| >d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.25 E-value=3.2e-12 Score=108.79 Aligned_cols=83 Identities=24% Similarity=0.337 Sum_probs=62.5
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
+++++.|++|+|.|.|.... ...|.+|+||.... .+. ...-.|.||+..+++|++
T Consensus 65 ~I~v~~GD~V~i~l~N~~~~----~~~Hg~~~h~~~~~-----~~~----------------~~~~~i~PGet~ty~f~a 119 (157)
T d2bw4a1 65 LMVVHENDYVELRLINPDTN----TLLHNIDFHAATGA-----LGG----------------GALTQVNPGEETTLRFKA 119 (157)
T ss_dssp EEEEETTCEEEEEEEECTTC----CSCBCCEETTSCSG-----GGG----------------GGGCCBCTTEEEEEEEEC
T ss_pred eEEEECCcEEEEEEEeCCCC----cceEeeeecccCCC-----cCC----------------cceeeECcCCEEeEEEEC
Confidence 48999999999999995322 11567777764321 110 011137899999999999
Q ss_pred CCceeeeeccc----chHhHHccceeeeeccc
Q 012467 410 DNPGAWAFHCH----IEPHFHIGMGVVLALGV 437 (463)
Q Consensus 410 dnpG~w~~HCH----i~~H~~~GM~~~~~~~~ 437 (463)
++||.|+|||| +.+|...||.+.|++.+
T Consensus 120 ~~pGt~~YH~H~~~~~~~h~~~Gl~G~~iV~p 151 (157)
T d2bw4a1 120 TKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLP 151 (157)
T ss_dssp CSCEEEEEECCCTTCHHHHHHTTCEEEEEEEC
T ss_pred CCCccceEEECCCCchHHHHhCCCEEEEEEeC
Confidence 99999999999 77899999998887654
|
| >d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Auracyanin species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=99.08 E-value=4.9e-11 Score=99.58 Aligned_cols=99 Identities=18% Similarity=0.130 Sum_probs=67.0
Q ss_pred EEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEe----ecCCCCCccccccC---CCCCCCccceEEeCCCcEE
Q 012467 331 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLG----RGEGKFTKEDEKKF---NLKNPPLKNTAVIFPYGWT 403 (463)
Q Consensus 331 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~----~g~g~~~~~~~~~~---n~~~p~~rDTv~v~~~g~~ 403 (463)
++++.|++|+|+|.|.+.+ .|+.+++...+.... ...+... ....+ .-..-...+|..+.+|+..
T Consensus 34 i~v~aG~~V~~~~~N~~~~------~~~Hn~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~~~~v~~~t~~~~pg~s~ 105 (139)
T d1qhqa_ 34 LSLPANTVVRLDFVNQNNL------GVQHNWVLVNGGDDVAAAVNTAAQNN--ADALFVPPPDTPNALAWTAMLNAGESG 105 (139)
T ss_dssp EEEETTCEEEEEEEECCSS------CCCBCCEEESSSHHHHHHHHHHHHTC--GGGTTCCCTTCTTEEEECCCBCTTEEE
T ss_pred EEECCCCEEEEEEeCCccc------ceeEEEeecccchhhHHHHHHhhhcc--chhccccCCCcccccccccccCCcceE
Confidence 8999999999999998866 454433222211000 0000000 00000 0011246788899999999
Q ss_pred EEEEEcCCceeeeecccchHhHHccceeeeeccc
Q 012467 404 ALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGV 437 (463)
Q Consensus 404 ~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~ 437 (463)
.|+|++..||.|.||||+..|...||.+.|.+.|
T Consensus 106 ~i~f~~~~~G~y~f~Ct~pgH~~~GM~G~i~V~P 139 (139)
T d1qhqa_ 106 SVTFRTPAPGTYLYICTFPGHYLAGMKGTLTVTP 139 (139)
T ss_dssp EEEEECCSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred EEEEecCCCeEEEEEcCCcCcccccCeEEEEEcC
Confidence 9999999999999999999999999999987643
|
| >d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=99.06 E-value=1.1e-09 Score=90.67 Aligned_cols=85 Identities=21% Similarity=0.287 Sum_probs=67.3
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
++.++.|+.|++.+.|.... .|.||+||.+. -...+|.. ...|+||+..+.+|.+
T Consensus 47 ~i~~~~Gd~v~v~~~N~l~~------~~siH~HG~~~--~~~~dG~~-----------------~~~i~pg~~~~y~~~~ 101 (140)
T d1kv7a1 47 AVKLQRGKAVTVDIYNQLTE------ETTLHWHGLEV--PGEVDGGP-----------------QGIIPPGGKRSVTLNV 101 (140)
T ss_dssp EEEEETTCEEEEEEEECSSS------CBCCEEETCCC--CGGGSCCT-----------------TCCBCTTCEEEEEEEC
T ss_pred eEEEECCCEEEEEEEeCccc------cccEeeeeeec--CCccCCCc-----------------cceEccCCceeEEEEE
Confidence 59999999999999998776 89999999753 12222211 1137899999999999
Q ss_pred CCc-eeeeecccc----hHhHHccceeeeeccccc
Q 012467 410 DNP-GAWAFHCHI----EPHFHIGMGVVLALGVET 439 (463)
Q Consensus 410 dnp-G~w~~HCHi----~~H~~~GM~~~~~~~~~~ 439 (463)
+++ |.+.||||. ..|...||++.+++.+++
T Consensus 102 ~~~aGt~wyH~H~~~~~~~~~~~Gl~G~liV~~~e 136 (140)
T d1kv7a1 102 DQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDE 136 (140)
T ss_dssp CSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHH
T ss_pred ecCCeeEEEEECCCCChHHHHhCCCeEEEEECCcc
Confidence 885 999999995 478999999999876654
|
| >d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=99.04 E-value=1.4e-10 Score=95.12 Aligned_cols=94 Identities=18% Similarity=0.202 Sum_probs=68.0
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEE-
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFV- 408 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~- 408 (463)
+++++.|+.|+|.|.|.... +.....|.||+||..+..-...+| ...-....|+||+..+.+|+
T Consensus 35 ~I~v~~GD~v~v~l~N~l~~-~~~~~~tsiH~HGl~~~~~~~~dg--------------v~g~~~~~I~PG~~~~y~~~~ 99 (131)
T d1hfua1 35 LIRGGKNDNFELNVVNDLDN-PTMLRPTSIHWHGLFQRGTNWADG--------------ADGVNQCPISPGHAFLYKFTP 99 (131)
T ss_dssp EEEEETTCCEEEEEEECCCC-TTSCCSBCEEEETCCCTTCGGGSC--------------CBTTTBCCBCTTCEEEEEECC
T ss_pred eEEEECCCEEEEEEEECCCC-ccccccceEEeCCcccCCCCCCCC--------------CcccccceECCCCeEEEEEeC
Confidence 59999999999999996432 011236899999964421111111 01112245889999999998
Q ss_pred cCCceeeeecccchHhHHccceeeeecccc
Q 012467 409 ADNPGAWAFHCHIEPHFHIGMGVVLALGVE 438 (463)
Q Consensus 409 adnpG~w~~HCHi~~H~~~GM~~~~~~~~~ 438 (463)
++.+|.|.||||...|...||.+.+++.++
T Consensus 100 ~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~ 129 (131)
T d1hfua1 100 AGHAGTFWYHSHFGTQYCDGLRGPMVIYDD 129 (131)
T ss_dssp TTCCEEEEEEECSTTGGGGTCEEEEEEECT
T ss_pred CCCcceEEEecCCHHHHhCCCEEEEEEcCC
Confidence 678999999999999999999999977653
|
| >d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=99.04 E-value=1.1e-09 Score=89.72 Aligned_cols=92 Identities=14% Similarity=0.147 Sum_probs=65.8
Q ss_pred EEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc-
Q 012467 331 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA- 409 (463)
Q Consensus 331 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a- 409 (463)
++++.|+.|++.|.|..... .....|.+|+||...- ..+.+. .+..-....|.||++...+|++
T Consensus 36 I~~~~GD~v~v~~~N~~~~~-~~~~~~~iH~HG~~~~--~~~~~d------------~~~~~s~~~i~PG~s~~Y~~~~~ 100 (130)
T d1gyca1 36 ITGKKGDRFQLNVVDTLTNH-TMLKSTSIHWHGFFQA--GTNWAD------------GPAFVNQCPIASGHSFLYDFHVP 100 (130)
T ss_dssp EEEETTCEEEEEEEECCCCG-GGCSCBCEEEETCCCT--TCGGGS------------CCBTTTBCCBCTTEEEEEEEECS
T ss_pred EEEECCeEEEEEEEecCCCc-ccCCceeEEecccccc--ccCCCC------------CccccccCCCCCCCeEEEEEECC
Confidence 89999999999999974310 0112678899996542 111110 0111122358999999999997
Q ss_pred CCceeeeecccchHhHHccceeeeeccc
Q 012467 410 DNPGAWAFHCHIEPHFHIGMGVVLALGV 437 (463)
Q Consensus 410 dnpG~w~~HCHi~~H~~~GM~~~~~~~~ 437 (463)
+.+|.|.||||...|...||.+.+.+.+
T Consensus 101 ~~~Gt~wYH~H~~~~~~~Gl~G~liV~~ 128 (130)
T d1gyca1 101 DQAGTFWYHSHLSTQYCDGLRGPFVVYD 128 (130)
T ss_dssp SCCEEEEEEECSTTGGGGTCEEEEEEEC
T ss_pred CCCceeEEecCCHHHHhCCCEEEEEEeC
Confidence 4699999999999999999999887654
|
| >d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.99 E-value=2.9e-10 Score=99.68 Aligned_cols=94 Identities=16% Similarity=0.144 Sum_probs=70.9
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
++.++.|++|+|+|.|.... .|+||.||..+.....+....+ ......+.+..|+||+..+.+|.+
T Consensus 77 ~Ira~~GD~v~V~~~N~~~~------p~siH~HG~~~~~~~~g~~~~d--------g~~~~~~~~~~v~PG~t~tY~~~~ 142 (192)
T d2j5wa1 77 IIKAETGDKVYVHLKNLASR------PYTFHSHGITYYKEHEGAIYPD--------NTTDFQRADDKVYPGEQYTYMLLA 142 (192)
T ss_dssp CEEEETTCEEEEEEEEESSS------CBCCEESSSBCCGGGCCCCSCC--------CCCGGGTGGGCBCTTCEEEEEEEC
T ss_pred eEEEECCcEEEEEEEeCCCC------CcceeccCcccCCcccccccCC--------CCCCCCcccCcccCCCEEEEEEEc
Confidence 59999999999999998766 8999999998764433221111 011234455679999999999997
Q ss_pred CC----------ceeeeecccch--HhHHccceeeeeccc
Q 012467 410 DN----------PGAWAFHCHIE--PHFHIGMGVVLALGV 437 (463)
Q Consensus 410 dn----------pG~w~~HCHi~--~H~~~GM~~~~~~~~ 437 (463)
.. +|.|+||||+. .|...||++.|++-+
T Consensus 143 ~~~~~p~~~d~~~gt~~YHsHv~~~~~~~~GL~G~lIV~~ 182 (192)
T d2j5wa1 143 TEEQSPGEGDGNCVTRIYHSHIDAPKDIASGLIGPLIICK 182 (192)
T ss_dssp CSTTSCCTTSCSEEEEEEECCSSHHHHHHHTCEEEEEEEC
T ss_pred cCccccccCCCCCceEEEeCCCCcHHHHhCCCeEEEEEcc
Confidence 53 67999999975 499999998887643
|
| >d1oe1a2 b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=98.98 E-value=1.6e-09 Score=91.78 Aligned_cols=147 Identities=14% Similarity=0.114 Sum_probs=106.9
Q ss_pred CCCCCCcceEEEEeeeecccHHHH-HhhhcCCCCCC--------CCCCCeEEECCCCCCCCccccccCCCCccccccCCC
Q 012467 40 EPFHYDGEFNLLLSDWWHRSVHEQ-EVGLSSRPLRW--------IGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGN 110 (463)
Q Consensus 40 ~p~~~d~e~~l~l~D~~~~~~~~~-~~~~~~~~~~~--------~~~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~ 110 (463)
.|+.||+++.++-+|+|......- ...+...+..+ ...|+.+++||+... ++
T Consensus 3 ~~~~yD~~yyv~e~d~Y~p~d~~g~~~~~~~~~~~~~d~~~~m~~~~P~~vvFNG~~ga-------lt------------ 63 (177)
T d1oe1a2 3 KPLHYDRAYTIGEFDLYIPKGPDGKYKDYATLAESYGDTVQVMRTLTPSHIVFNGKVGA-------LT------------ 63 (177)
T ss_dssp CBCCCSEEEEEEEEEECCCBCTTSSBCCCSSTGGGHHHHHHHHHTTCCSEEEETTSTTT-------TS------------
T ss_pred CCcccceEEEecccEeecCCCCCCCccccCChhhcchhHHHHHhccCCcEEEECCcccc-------cc------------
Confidence 478999999999999998432110 00000000000 247899999998764 10
Q ss_pred CCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccce--eeEeeEEecCCceEEEEEecCCCCCCce
Q 012467 111 EQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQP--FEVDDMDIYSGESYSVLLTTNQDPSYNY 188 (463)
Q Consensus 111 ~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P--~~~~~l~i~~GeR~dvlV~~~~~~~g~y 188 (463)
+ ...++++.||++| |+|+++.+..+|++.|+.|..|..+|.+..| ..++++.|.+|++.-+.+++++ +|.|
T Consensus 64 -~--~~~l~akvGe~Vr--i~~~~~N~~ssfHlIG~hfD~V~~~G~~~n~p~~~~qT~~V~pG~~~~v~~tf~~--PG~Y 136 (177)
T d1oe1a2 64 -G--ANALTAKVGETVL--LIHSQANRDTRPHLIGGHGDWVWETGKFANPPQRDLETWFIRGGSAGAALYTFKQ--PGVY 136 (177)
T ss_dssp -G--GGCEEEETTCEEE--EEEEESSSCBCEEETTCCEEEEETTCCTTSCCEEEESBCCBCTTEEEEEEEECCS--CEEE
T ss_pred -C--CCCcccccCCeEE--EEecCCCCCccceecccccceEccCCeeCCCCCcCceeEEecCCccEEEEEEecC--ceEE
Confidence 0 1148999999775 5789999999999999999999999998864 3467999999999999999986 7999
Q ss_pred EEEEEecCCCCCCCCeEEEEEeCCC
Q 012467 189 WISAGVRGRKPATPPALTLLNYHPT 213 (463)
Q Consensus 189 ~ir~~~~~~~~~~~~~~a~l~y~~~ 213 (463)
.+........ ......|+|.+++.
T Consensus 137 ~fV~H~L~ea-~~~Ga~g~l~V~G~ 160 (177)
T d1oe1a2 137 AYLNHNLIEA-FELGAAGHIKVEGK 160 (177)
T ss_dssp EEEESSHHHH-HTTSCEEEEEEESC
T ss_pred EEEecHHHHH-HhcCCeEEEEecCC
Confidence 9887643211 13467899999864
|
| >d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=98.97 E-value=1.3e-09 Score=92.61 Aligned_cols=145 Identities=15% Similarity=0.102 Sum_probs=105.1
Q ss_pred CCCCCCcceEEEEeeeecccH-----------HHHHhhhcCCCCCCCCCCCeEEECCCCCCCCccccccCCCCccccccC
Q 012467 40 EPFHYDGEFNLLLSDWWHRSV-----------HEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLR 108 (463)
Q Consensus 40 ~p~~~d~e~~l~l~D~~~~~~-----------~~~~~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~ 108 (463)
.|+.||+|+.++-+|+|.... .+.+..+... +. ...|+.+++||+... +
T Consensus 3 ~~~~yD~~~y~~~~d~Y~p~d~~g~~~~~~~~~~~~~d~~~~-m~-~~~Pt~vvFNG~v~a---l--------------- 62 (173)
T d2bw4a2 3 QPLTYDKIYYVGEQDFYVPKDEAGNYKKYETPGEAYEDAVKA-MR-TLTPTHIVFNGAVGA---L--------------- 62 (173)
T ss_dssp CEECCSEEEEEEEEEECCCBCTTSCBCCCCSHHHHHHHHHHH-HH-TTCCSEEEETTSTTT---T---------------
T ss_pred CccccceEEEecccEeecCCCCCCCccCcCChhhcchhHHHH-Hh-ccCCCEEEECCCccc---c---------------
Confidence 467899999999999997321 1111111000 00 247899999997653 1
Q ss_pred CCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccce--eeEeeEEecCCceEEEEEecCCCCCC
Q 012467 109 GNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQP--FEVDDMDIYSGESYSVLLTTNQDPSY 186 (463)
Q Consensus 109 ~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P--~~~~~l~i~~GeR~dvlV~~~~~~~g 186 (463)
...-.++++.||++ ||+|++..+...|++.|+.|.+|..+|.+..| ..++++.|.+|++..+.+++++ +|
T Consensus 63 ----tg~~~l~akvGErV--~i~~~~~n~~s~fHliG~hFD~V~~~G~~~~~p~~~~qTv~VppG~a~~ve~~f~~--PG 134 (173)
T d2bw4a2 63 ----TGDHALTAAVGERV--LVVHSQANRDTRPHLIGGHGDYVWATGKFRNPPDLDQETWLIPGGTAGAAFYTFRQ--PG 134 (173)
T ss_dssp ----SGGGCEEEETTCEE--EEEEEESSSCBCEEEETCCEEEEETTCCTTSCCEEEESCCCBCTTEEEEEEEECCS--CE
T ss_pred ----ccccCcccccCCeE--EEEecCCCCCccceeccceeEEECCCCcccCCCcCCceeEEccCCccEEEEEEecC--ce
Confidence 00114899999965 67888888889999999999999999998854 3467999999999999999996 69
Q ss_pred ceEEEEEecCCCCCCCCeEEEEEeCCC
Q 012467 187 NYWISAGVRGRKPATPPALTLLNYHPT 213 (463)
Q Consensus 187 ~y~ir~~~~~~~~~~~~~~a~l~y~~~ 213 (463)
.|.+........ ......++|.+++.
T Consensus 135 ~y~~v~H~l~ea-~~~G~~g~l~V~G~ 160 (173)
T d2bw4a2 135 VYAYVNHNLIEA-FELGAAGHFKVTGE 160 (173)
T ss_dssp EEEEEESSHHHH-HTTSCEEEEEEESC
T ss_pred EEEEEechHHHH-HhCCCEEEEEEcCC
Confidence 998876532211 12457899999864
|
| >d1ibya_ b.6.1.4 (A:) Red copper protein nitrosocyanin {Nitrosomonas europaea [TaxId: 915]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Red copper protein nitrosocyanin species: Nitrosomonas europaea [TaxId: 915]
Probab=98.96 E-value=7.9e-10 Score=88.28 Aligned_cols=73 Identities=21% Similarity=0.372 Sum_probs=61.0
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.+.++.|+.|+|+|.|.+.. .|+|++|++... ..+.+|+...++|++
T Consensus 39 ~i~v~~Gd~V~~~~~n~d~~------~H~~~i~~~~~~---------------------------~~~~pG~t~~~~f~~ 85 (112)
T d1ibya_ 39 TLVVKKGDAVKVVVENKSPI------SEGFSIDAFGVQ---------------------------EVIKAGETKTISFTA 85 (112)
T ss_dssp EEEEETTCEEEEEEEECSSS------CEEEEEGGGTEE---------------------------EEECTTCEEEEEEEC
T ss_pred EEEEeCCCEEEEEEEeCCCC------ceeeeecccccc---------------------------cccCCcceEEEEEEe
Confidence 38999999999999998876 899999987442 235689999999999
Q ss_pred CCceeeeecccchHhHHccceeeeecc
Q 012467 410 DNPGAWAFHCHIEPHFHIGMGVVLALG 436 (463)
Q Consensus 410 dnpG~w~~HCHi~~H~~~GM~~~~~~~ 436 (463)
+.||.|.||||+--| ..||.+.|.+.
T Consensus 86 ~~~G~y~y~C~~~~~-~~~M~G~i~V~ 111 (112)
T d1ibya_ 86 DKAGAFTIWCQLHPK-NIHLPGTLNVV 111 (112)
T ss_dssp CSCEEEEEBCSSSCT-TTBCCEEEEEE
T ss_pred ccceEEEEECcccCh-hhcCeEEEEEE
Confidence 999999999998544 46798888653
|
| >d1sddb1 b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.90 E-value=3.2e-10 Score=80.57 Aligned_cols=36 Identities=14% Similarity=0.188 Sum_probs=30.0
Q ss_pred cccccccce----------eEEEeccc--hhhhhcceeeEEEEeCCCC
Q 012467 2 LDVWQVQAG----------TYFYHGHL--GMQRSAGLYGSLIVDVADG 37 (463)
Q Consensus 2 ~~~~~~~~G----------T~WYHsH~--~~q~~~Gl~G~lIV~~~~~ 37 (463)
|+|.+.+.| |||||||. ..|+.+||+|+|||.++..
T Consensus 11 Y~w~v~~~~gp~~~d~~c~t~~YHsHv~~~~q~~~GL~G~liV~~~g~ 58 (67)
T d1sddb1 11 YVWHATTRSGPENPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKGT 58 (67)
T ss_dssp CCEECCTTTSCCSSSCSEEEEEEECCSSHHHHHTTTCEEEEEEECTTS
T ss_pred EEEEcCCcCCCccCCCCceeEEEEcccchHHHhhCCceEEEEEcCCCC
Confidence 777777555 99999995 5699999999999998753
|
| >d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=98.79 E-value=4.6e-09 Score=86.33 Aligned_cols=95 Identities=17% Similarity=0.266 Sum_probs=67.1
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
+++++.|+.++|.+.|..... .....+.+|+||... -+...+ .....-....|+||+..+.+|++
T Consensus 35 ~i~~~~GD~v~v~~~N~l~~~-~~~~~tsiH~HGl~~--~~~~~~------------dgv~~~t~~~I~PG~~~~Y~~~~ 99 (136)
T d1v10a1 35 LITGNIDDRFQINVIDQLTDA-NMRRATSIHWHGFFQ--AGTTEM------------DGPAFVNQCPIIPNESFVYDFVV 99 (136)
T ss_dssp CEEEETTCEEEEEEEECCCCT-TSCCCBCEEEETCCC--TTCGGG------------SCCBTTTBCCBCTTEEEEEEEEC
T ss_pred eEEEECCcEEEEEEEeCCCCc-ccCcceeEEeccccc--cccccc------------CCCCccccceECCCCeEEEEEEC
Confidence 499999999999999964320 011267899999532 111100 00111123458899999999998
Q ss_pred C-CceeeeecccchHhHHccceeeeeccccc
Q 012467 410 D-NPGAWAFHCHIEPHFHIGMGVVLALGVET 439 (463)
Q Consensus 410 d-npG~w~~HCHi~~H~~~GM~~~~~~~~~~ 439 (463)
. .+|.|.||||...|...||.+.+++.+++
T Consensus 100 ~~~~Gt~wYH~H~~~q~~~GL~G~liV~~~~ 130 (136)
T d1v10a1 100 PGQAGTYWYHSHLSTQYCDGLRGAFVVYDPN 130 (136)
T ss_dssp TTCCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred CCCccceEEecCchhHHhCCCEEEEEECCCc
Confidence 5 59999999999999999999999775543
|
| >d1mzya2 b.6.1.3 (A:194-371) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=98.67 E-value=1.3e-07 Score=78.99 Aligned_cols=146 Identities=12% Similarity=0.056 Sum_probs=108.0
Q ss_pred CCCCCCCcceEEEEeeeecccHH-----------HHHhhhcCCCCCCCCCCCeEEECCCCCCCCccccccCCCCcccccc
Q 012467 39 KEPFHYDGEFNLLLSDWWHRSVH-----------EQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKL 107 (463)
Q Consensus 39 ~~p~~~d~e~~l~l~D~~~~~~~-----------~~~~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~ 107 (463)
..|+.||+|+.|+-+|+|..... +.+..+... +. ...|+.+++||+... ++
T Consensus 6 g~~l~yDr~yYvge~dfY~p~d~~G~~k~y~~~~~~~~d~~e~-m~-~l~PthVVFNG~vga-------lt--------- 67 (178)
T d1mzya2 6 GKPVRYDTVYYIGESDHYIPKDEDGTYMRFSDPSEGYEDMVAV-MD-TLIPSHIVFNGAVGA-------LT--------- 67 (178)
T ss_dssp SCBCCCSEEEEEEEEEECCCBCTTSCBCCCSSHHHHHHHHHHH-HT-TTCCSEEEETTSTTT-------TS---------
T ss_pred CCccccCeEEEEecceeecCCCCCCCccccCChhhcchhHHHH-HH-ccCCCEEEECCccCc-------cc---------
Confidence 46789999999999999963221 111111000 00 246899999998764 10
Q ss_pred CCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccce--eeEeeEEecCCceEEEEEecCCCCC
Q 012467 108 RGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQP--FEVDDMDIYSGESYSVLLTTNQDPS 185 (463)
Q Consensus 108 ~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P--~~~~~l~i~~GeR~dvlV~~~~~~~ 185 (463)
..-.++.+.||++ ||+|++..+.-+|++-|-.+.-|--+|.+..| ..++++.|.+|+.--+++++.+ +
T Consensus 68 ------g~~aL~AkvGEtV--~~~~~gpN~~SsfHvIGg~~D~V~~~G~~~n~p~~~~qT~~v~~G~a~~~~~tf~~--P 137 (178)
T d1mzya2 68 ------GEGALKAKVGDNV--LFVHSQPNRDSRPHLIGGHGDLVWETGKFHNAPERDLETWFIRGGTAGAALYKFLQ--P 137 (178)
T ss_dssp ------GGGCEEEETTCEE--EEEEEESSSCBCEEEETCCEEEEETTCCTTSCCEEEESBCCBCTTEEEEEEEECCS--C
T ss_pred ------CCCCcccccCCeE--EEecccCCCCCCcccccCccceEccCCccCCCCCCCceEEEecCCceeEEEEEeCC--C
Confidence 0114899999987 67999999999999999999988899998864 4579999999999999999997 6
Q ss_pred CceEEEEEecCCCCCCCCeEEEEEeCCC
Q 012467 186 YNYWISAGVRGRKPATPPALTLLNYHPT 213 (463)
Q Consensus 186 g~y~ir~~~~~~~~~~~~~~a~l~y~~~ 213 (463)
|.|.+......+. ....+.|+|.+++.
T Consensus 138 G~Y~~VdH~l~~A-~~kGA~g~l~V~G~ 164 (178)
T d1mzya2 138 GVYAYVNHNLIEA-VHKGATAHVLVEGE 164 (178)
T ss_dssp EEEEEEESSHHHH-HTTCCEEEEEEESC
T ss_pred eEEEEEccHHHHH-HhCCCeEEEEeCCC
Confidence 9999877643221 13467899999853
|
| >d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.65 E-value=6.9e-08 Score=79.87 Aligned_cols=114 Identities=12% Similarity=0.115 Sum_probs=76.3
Q ss_pred cceEEEEe------eeecccHHHHHhhhcCCCCCCCCCCCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEE
Q 012467 46 GEFNLLLS------DWWHRSVHEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILH 119 (463)
Q Consensus 46 ~e~~l~l~------D~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~ 119 (463)
+|++|+++ -|+.+............. +........|||+... . +.+.
T Consensus 3 ~ef~l~f~vfdEn~Swy~~~n~~~~~~~~~~~--~~~~~~~~tiNG~~~~---~----------------------p~~~ 55 (139)
T d1sddb2 3 REFVLLFMVFDEKKSWYYDKKPTRSWRRASSE--VKNSHEFHAINGMIYN---L----------------------PGLR 55 (139)
T ss_dssp CEEEEEEEEEEGGGSSCCC-----------------CCCEEEEETTBSSC---C----------------------CCCE
T ss_pred eEEEEEEeeEcCccccccccCccccccCCChh--hhhccccceeCcEecC---C----------------------Cccc
Confidence 68888876 366655432221111111 1234456789998642 1 2478
Q ss_pred ecCCCeEEEEEEecCcce-EEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEE
Q 012467 120 VQPNKTYRLRIASTTALA-SLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAG 193 (463)
Q Consensus 120 v~~g~~~RlRliNa~~~~-~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~ 193 (463)
++.|+++||||+|.|+.. .+.+++.|+.+.+...+ +...+++.|.||+++++.++++. +|.|++.-.
T Consensus 56 v~~gd~v~~~l~n~g~~~~~h~iH~HG~~f~~~~~~-----~~~~dt~~i~pg~~~t~~~~~~~--pG~w~~HcH 123 (139)
T d1sddb2 56 MYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQ-----QHQLGVWPLLPGSFKTLEMKASK--PGWWLLDTE 123 (139)
T ss_dssp EETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSS-----CEEESSEEECTTEEEEEEEECCS--SEEEEEECC
T ss_pred cccCCcEEEEEEecCCCCCcccEEEcceEEEeccCC-----CCcCCeEEECCCCEEEEEEecCC--CEeEEEEeC
Confidence 889999999999998654 59999999998764322 33578999999999999999986 799988643
|
| >d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.60 E-value=2.2e-08 Score=86.23 Aligned_cols=94 Identities=12% Similarity=0.091 Sum_probs=65.8
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
+++++.|++|.++|.|.... .+.||.||..+.....+....+.. .+.-.-...|+||++.+.+|.+
T Consensus 61 ~Ira~~GD~i~V~f~N~~~~------~~siH~HG~~~~~~~~~~~~~d~~--------~~~~~~~~~V~PGet~tY~w~v 126 (180)
T d1sdda1 61 TLYAEVGDIMKVHFKNKAHK------PLSIHAQGIKYSKFSEGASYSDHT--------LPMEKMDDAVAPGQEYTYEWII 126 (180)
T ss_dssp CEEEETTCEEEEEEEECSSS------CBCCEEESSCCCTTTSCCCSCCCC--------CHHHHTTTCBCTTCEEEEEEEC
T ss_pred eEEEECCcEEeeEEEeCCCC------CccccccccccccccccccccccC--------CCCCccccccCCCCEEEEEEEe
Confidence 59999999999999998765 899999998764332211111100 0000111248899999999998
Q ss_pred CC----------ceeeeecccchH--hHHccceeeeeccc
Q 012467 410 DN----------PGAWAFHCHIEP--HFHIGMGVVLALGV 437 (463)
Q Consensus 410 dn----------pG~w~~HCHi~~--H~~~GM~~~~~~~~ 437 (463)
.. .|.|+||||+.. |...||.+.|++-.
T Consensus 127 ~~~~gp~~~d~~~gt~~YHshv~~~~~~~~GL~G~lIV~~ 166 (180)
T d1sdda1 127 SEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICK 166 (180)
T ss_dssp CGGGSCCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEEC
T ss_pred CCcccCccCCCCCEEEEEecCCCcHHHhhCCceEEEEEcc
Confidence 63 489999999744 88899998886543
|
| >d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.59 E-value=4.4e-08 Score=81.70 Aligned_cols=68 Identities=6% Similarity=0.016 Sum_probs=57.0
Q ss_pred eEEEecCCCeEEEEEEecCcc-eEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEE
Q 012467 116 QILHVQPNKTYRLRIASTTAL-ASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAG 193 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~-~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~ 193 (463)
+.+.++.|+++||+|+|.+.. ..+.|+++|+.|.+ .....+++.|.||+++++.++++. +|.|++.-.
T Consensus 59 p~l~v~~Gd~v~~~l~n~g~~~~~h~iH~hG~~f~~--------~~~~~dt~~i~pg~~~t~~~~a~~--pG~w~~HCH 127 (145)
T d2j5wa2 59 PGLTMCKGDSVVWYLFSAGNEADVHGIYFSGNTYLW--------RGERRDTANLFPQTSLTLHMWPDT--EGTFNVECL 127 (145)
T ss_dssp CCCEEETTCCEEEEEECCCSTTCCEEEEETTCCEEE--------TTEEESEEEECTTCEEEEEECCCS--CEEEEEEEC
T ss_pred CCeEEEcCCeEEEEEEecCCCCcccceEecccEEEe--------cccCccceEECCCCEEEEEEEcCC--CEeEEEEcC
Confidence 358999999999999998765 45899999999875 234578899999999999999986 699988754
|
| >d1fwxa1 b.6.1.4 (A:452-581) Nitrous oxide reductase, C-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Nitrous oxide reductase, C-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.54 E-value=6.1e-08 Score=79.17 Aligned_cols=77 Identities=22% Similarity=0.199 Sum_probs=60.2
Q ss_pred EEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcC
Q 012467 331 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 410 (463)
Q Consensus 331 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~ad 410 (463)
+.++.|+.|.|.|.|.+.. .|.+|-| .|-.. .-...+.||....++|+++
T Consensus 54 i~V~~Gd~V~~~ltN~d~~------~~v~H~~----~i~~~--------------------~~~~~~~PG~~~~~~F~a~ 103 (132)
T d1fwxa1 54 FTVKEGDEVTVIVTNLDEI------DDLTHGF----TMGNY--------------------GVAMEIGPQMTSSVTFVAA 103 (132)
T ss_dssp EEEETTCEEEEEEEECCCS------TTCCEEE----EETTT--------------------TEEEEECTTCEEEEEEECC
T ss_pred EEEcCCCEEEEEEEcCCCC------ccceEee----chhhh--------------------ccccccCCCEEEEEEEeCC
Confidence 8999999999999998765 6666544 23211 1234677899999999999
Q ss_pred CceeeeecccchHhHH-ccceeeeeccc
Q 012467 411 NPGAWAFHCHIEPHFH-IGMGVVLALGV 437 (463)
Q Consensus 411 npG~w~~HCHi~~H~~-~GM~~~~~~~~ 437 (463)
+||.|.+|||..-|.. .||.+.+.+.|
T Consensus 104 ~~G~y~~~C~~~cg~~H~~M~G~iiVeP 131 (132)
T d1fwxa1 104 NPGVYWYYCQWFCHALHMEMRGRMLVEP 131 (132)
T ss_dssp SCEEEEEECCSCCSTTCTTCEEEEEEEC
T ss_pred CCeEEEEECccccCcchhcCEEEEEEEc
Confidence 9999999999876664 79999887654
|
| >d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=98.49 E-value=1.4e-07 Score=81.03 Aligned_cols=75 Identities=12% Similarity=0.146 Sum_probs=58.6
Q ss_pred eEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccce---eeEeeEEecCCceEEEEEecCCC--CCCceEE
Q 012467 116 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQP---FEVDDMDIYSGESYSVLLTTNQD--PSYNYWI 190 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P---~~~~~l~i~~GeR~dvlV~~~~~--~~g~y~i 190 (463)
+.++++.|+++||||+|.+....+.|+|+||.|+|++.+|.++.+ ...|++.|.+|+ ..++|++..+ ..|.|-+
T Consensus 85 p~~~~~~G~~erw~i~N~~~~~~HP~HlHG~~F~Vl~~~g~~~~~~~~~~kDTv~v~~~~-~~v~v~f~~~~~~~G~w~f 163 (181)
T d1kv7a3 85 PMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVEGNV-SEVLVKFNHDAPKEHAYMA 163 (181)
T ss_dssp CSEECCSSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCCCGGGSSSBSEEEESSSE-EEEEECCCSCCCGGGCEEE
T ss_pred CceEeCCCCEEEEEEEeCCCCCccCceEeceEEEEEecccCCccccCCcceeEEEeCCCc-eEEEEEEEeeCCCCCeEEE
Confidence 358999999999999999977789999999999999999998754 456899997664 4556655432 2366655
Q ss_pred E
Q 012467 191 S 191 (463)
Q Consensus 191 r 191 (463)
.
T Consensus 164 H 164 (181)
T d1kv7a3 164 H 164 (181)
T ss_dssp E
T ss_pred e
Confidence 4
|
| >d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.42 E-value=1.1e-07 Score=79.30 Aligned_cols=67 Identities=4% Similarity=0.158 Sum_probs=57.0
Q ss_pred EEEecCCCeEEEEEEecCcc-eEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEE
Q 012467 117 ILHVQPNKTYRLRIASTTAL-ASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAG 193 (463)
Q Consensus 117 ~~~v~~g~~~RlRliNa~~~-~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~ 193 (463)
.+.++.|+++||+|+|.|.. ..+.+++.|+.+. ..+...|++.|.||+++.+.++++. +|.|++.-.
T Consensus 61 ~l~~~~gd~v~~~l~n~g~~~~~h~~H~hg~~~~--------~~~~~~dt~~i~pg~~~~v~f~~~~--pG~w~~HCH 128 (146)
T d1kcwa2 61 GLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALT--------NKNYRIDTINLFPATLFDAYMVAQN--PGEWMLSCQ 128 (146)
T ss_dssp CCEEETTEEEEEEEECCCSTTCCEEEEETTSCCC--------CSSSCCSEEEECTTCEEEEEEEECS--CEEEEEEEC
T ss_pred cceEecCCeEEEEEEEcCCCCcccceEeeeeeee--------ccCCCcceEEecCCCEEEEEEEcCC--CeeEEEEcC
Confidence 58899999999999998865 5688999998874 3566788999999999999999986 699998754
|
| >d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.36 E-value=2.6e-07 Score=81.10 Aligned_cols=96 Identities=14% Similarity=0.129 Sum_probs=64.7
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
+++++.|++|+|+|.|.... .+.||.||..+.--. +|..-.. .... ...+.......|.||+..+.+|.+
T Consensus 87 ~Ira~~GD~v~V~~~N~~~~------p~siH~HG~~~~~~~--dg~~~~~-~~~~-~~~~~~~~~~~V~PGet~tY~w~v 156 (207)
T d2j5wa3 87 VIWAEVGDTIRVTFHNKGAY------PLSIEPIGVRFNKNN--EGTYYSP-NYNP-QSRSVPPSASHVAPTETFTYEWTV 156 (207)
T ss_dssp CEEEETTEEEEEEEEECSSS------CBCCEEESSBCCGGG--CSBCCBC-C--------CCCCSSCBCTTCEEEEEEEC
T ss_pred eEEEECCCEEEEEEEECCCC------CccccccccccCccc--ccccccC-CCCc-ccCCcCcccceecCCCEEEEEEEe
Confidence 59999999999999998766 899999998764322 2211100 0000 000111222458899999999997
Q ss_pred CCce----------eeeecccchH--hHHccceeeeec
Q 012467 410 DNPG----------AWAFHCHIEP--HFHIGMGVVLAL 435 (463)
Q Consensus 410 dnpG----------~w~~HCHi~~--H~~~GM~~~~~~ 435 (463)
...+ .|+||||+.. |...||.+.|++
T Consensus 157 ~~~~gP~~~d~~c~T~~YHshv~~~~d~~~GL~G~lIV 194 (207)
T d2j5wa3 157 PKEVGPTNADPVCLAKMYYSAVDPTKDIFTGLIGPMKI 194 (207)
T ss_dssp CGGGSCCSSSCSEEEEEEECBSSHHHHHHHTCEEEEEE
T ss_pred cCCCCCccCCCCceeEEEccCCChhHhhccCceEEEEE
Confidence 6643 7999999755 457799988865
|
| >d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.30 E-value=1.4e-06 Score=72.54 Aligned_cols=70 Identities=10% Similarity=0.131 Sum_probs=58.8
Q ss_pred EEEecCCCeEEEEEEecCcc-eEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEE
Q 012467 117 ILHVQPNKTYRLRIASTTAL-ASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAG 193 (463)
Q Consensus 117 ~~~v~~g~~~RlRliNa~~~-~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~ 193 (463)
.+.++.|+++||+|+|.+.. ..+.++++||.|.+.. || +...|++.|.||+++++.++++. +|.|++.-.
T Consensus 61 ~l~v~~Gd~v~~~l~n~g~~~~~h~~H~HG~~f~~~~-~g----~~~~dtv~i~pg~~~~~~~~a~~--pG~w~~HCH 131 (149)
T d2j5wa5 61 GLTMHVGDEVNWYLMGMGNEIDLHTVHFHGHSFQYKH-RG----VYSSDVFDIFPGTYQTLEMFPRT--PGIWLLHCH 131 (149)
T ss_dssp CCEEETTCEEEEEEEECCSTTCCEEEEESSCCEEETT-TT----CEEESEEEECTTCEEEEEECCCS--CEEEEEEEC
T ss_pred CeEEEcCCcEEEEEEecCCCCCccceEEEeeEeeeec-cC----CCCcceEEECCCceEEEEEeCCC--CeeEEEEcC
Confidence 58899999999999999876 4799999999998642 33 33578899999999999999886 699988764
|
| >d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.22 E-value=1.4e-06 Score=74.01 Aligned_cols=77 Identities=16% Similarity=0.182 Sum_probs=60.9
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
+++++.|++|.++|.|.... .+.||.||...- . .. |. .|.||+..+.+|.+
T Consensus 87 ~IraevGD~i~V~f~N~a~~------p~SiH~HGv~~~--~----~~----------------~~-~v~PGet~tY~w~v 137 (179)
T d2j5wa4 87 QLHADVGDKVKIIFKNMATR------PYSIHAHGVQTE--S----ST----------------VT-PTLPGETLTYVWKI 137 (179)
T ss_dssp CEEEETTEEEEEEEEECSSS------CBCCEESSCBCS--C----SC----------------CC-CBCTTCEEEEEEEC
T ss_pred eEEEECCCEEEEEEEeCCCC------CEeEeeccccCC--C----CC----------------CC-cccCCccEEEEEEe
Confidence 59999999999999998766 899999998521 0 00 11 37799999999987
Q ss_pred CCce----------eeeecccchH--hHHccceeeeec
Q 012467 410 DNPG----------AWAFHCHIEP--HFHIGMGVVLAL 435 (463)
Q Consensus 410 dnpG----------~w~~HCHi~~--H~~~GM~~~~~~ 435 (463)
...+ .|++|||+.. |...||.+.+++
T Consensus 138 ~~~~gp~~~d~~c~t~~YHShv~~~~d~~sGL~GplIV 175 (179)
T d2j5wa4 138 PERSGAGTEDSACIPWAYYSTVDQVKDLYSGLIGPLIV 175 (179)
T ss_dssp CGGGSCCTTSCSEEEEEEECCTTHHHHHHTTCEEEEEE
T ss_pred cCccCCccCCCCceeEEEecCCCcHHHhhCCCeEEEEE
Confidence 6533 8999999854 778999988865
|
| >d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.11 E-value=7.7e-08 Score=76.92 Aligned_cols=66 Identities=8% Similarity=0.117 Sum_probs=43.1
Q ss_pred EEEecCCCeEEEEEEecCcce-EEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEE
Q 012467 117 ILHVQPNKTYRLRIASTTALA-SLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA 192 (463)
Q Consensus 117 ~~~v~~g~~~RlRliNa~~~~-~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~ 192 (463)
.++++.|+++||+|+|.|... .+.+++.|+.|.+ .+...|++.|.||++.++.++++. +|.|++.-
T Consensus 36 ~~~v~~Gd~v~~~v~n~g~~~~~h~iH~Hg~~f~~--------~~~~~dtv~i~pg~~~~v~~~a~~--pG~w~~HC 102 (116)
T d1sdda2 36 DITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ--------NHHKISAITLVSATSTTANMTVSP--EGRWTIAS 102 (116)
T ss_dssp CCCCCCC------BBCCCSSSCEECCBCSSTTCEE--------TTEECSCCCEETTCCBC----------CCCCCBC
T ss_pred CeEEeCCCEEEEEEeccccCCCceeEEEecccccc--------CCcccceEeecccEEEEEEEEcCC--CeEEEEEc
Confidence 578999999999999998764 6899999999875 345678899999999999999975 68988754
|
| >d1qnia1 b.6.1.4 (A:451-581) Nitrous oxide reductase, C-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Nitrous oxide reductase, C-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=97.97 E-value=1.3e-05 Score=64.68 Aligned_cols=77 Identities=18% Similarity=0.266 Sum_probs=56.9
Q ss_pred EEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcC
Q 012467 331 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 410 (463)
Q Consensus 331 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~ad 410 (463)
+.++.|+.|.+.|.|.... ....|.|++.+..+. ..+.||....+.|+++
T Consensus 53 i~V~~Gd~V~~~vtn~~~s---~Dv~H~f~ip~~~v~---------------------------~~~~PG~t~~~~f~~~ 102 (131)
T d1qnia1 53 FKVKEGDEVTVYITNLDMV---EDVTHGFCMVNHGVS---------------------------MEISPQQTASVTFTAG 102 (131)
T ss_dssp EEEETTCEEEEEEEECCCS---TTCCEEEEETTTTEE---------------------------EEECTTCEEEEEEECC
T ss_pred EEecCCCEEEEEEEccCCC---CcceEEEEEeccCcc---------------------------cccCCCceEEEEEEcC
Confidence 8999999999999996543 011455555544321 2366899999999999
Q ss_pred CceeeeecccchHhHH-ccceeeeeccc
Q 012467 411 NPGAWAFHCHIEPHFH-IGMGVVLALGV 437 (463)
Q Consensus 411 npG~w~~HCHi~~H~~-~GM~~~~~~~~ 437 (463)
+||.|.+||+..-|.. .||.+.+.+.+
T Consensus 103 ~~G~y~~~C~~~cg~~H~~M~g~i~Vep 130 (131)
T d1qnia1 103 KPGVYWYYCNWFCHALHMEMVGRMLVEA 130 (131)
T ss_dssp SSEEEEEECCSCCSTTGGGCEEEEEEEC
T ss_pred CCEEEEEECccccCcchhcCeeEEEEEe
Confidence 9999999999765543 68988876643
|
| >d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=97.95 E-value=7.8e-06 Score=69.11 Aligned_cols=74 Identities=14% Similarity=0.188 Sum_probs=62.0
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
++.++.|++++|.|+|.+... .+.||++||+|.|++. +|.+ ..|...|++.|.+|++..|.+++
T Consensus 56 ~~~v~~g~~~rlRlina~~~~-----~~~~~id~H~~~Via~-DG~~----------v~P~~~d~i~i~~GqR~dvlv~~ 119 (168)
T d1v10a2 56 VVSVQSGKRYRFRIVSTSCFP-----NYAFSIDGHRMTVIEV-DGVS----------HQPLTVDSLTIFAGQRYSVVVEA 119 (168)
T ss_dssp EEEECTTCEEEEEEEECCSSC-----CEEEEETTCCEEEEEE-TTEE----------EEEEEESBEEECTTCEEEEEEEC
T ss_pred EEEECCCCEEEEEEEecccCc-----eEEEEECCCeEEEEEe-CCee----------cCceEEeEEEEccCceEEEEEEC
Confidence 589999999999999987652 7999999999999997 4543 23678899999999999999999
Q ss_pred CC-ceeeeecc
Q 012467 410 DN-PGAWAFHC 419 (463)
Q Consensus 410 dn-pG~w~~HC 419 (463)
+. +|.|.++-
T Consensus 120 ~~~~~~y~ira 130 (168)
T d1v10a2 120 NQAVGNYWIRA 130 (168)
T ss_dssp CSCSSEEEEEE
T ss_pred CCCCCcEEEEE
Confidence 76 77655544
|
| >d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=97.85 E-value=1.3e-05 Score=68.82 Aligned_cols=97 Identities=13% Similarity=-0.009 Sum_probs=60.9
Q ss_pred EEEccCCCEEEEEEEeCCCCCC----------------CCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccc
Q 012467 330 VYMLGLNTTVDVILQNANAIRP----------------NLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKN 393 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~----------------~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rD 393 (463)
+++++.|+.+++.+.|.-.... .......+|+||.+. -...+|.-. .....+
T Consensus 58 tI~v~~Gd~v~v~~~N~Lp~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~--~~~~DG~~~----------~~~~~~ 125 (181)
T d1gska1 58 TIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVT--PDDSDGYPE----------AWFSKD 125 (181)
T ss_dssp BEEEETTCCEEEEEEECCCSSCSSCCCTTCC-------CCSCCBCEEEETCCC--CGGGSCCTT----------SCBCGG
T ss_pred eEEEeCCeEEEEEEEeCCCcCccccccccccccccccccCCCcceeeeecccc--CCccCCCcc----------cccccC
Confidence 4999999999999999532100 001135699999652 122223210 001111
Q ss_pred e-EEeCCCcEEEEEEEcCC-ceeeeecccc----hHhHHccceeeeecccc
Q 012467 394 T-AVIFPYGWTALRFVADN-PGAWAFHCHI----EPHFHIGMGVVLALGVE 438 (463)
Q Consensus 394 T-v~v~~~g~~~irf~adn-pG~w~~HCHi----~~H~~~GM~~~~~~~~~ 438 (463)
. ...+.+.+.+.+|.++. +|.|.||||. ..|...||.+.+++.++
T Consensus 126 ~~~~~~~~~~~~y~~~~~~~~Gt~WYH~H~~g~t~~qv~~GL~G~~iV~d~ 176 (181)
T d1gska1 126 FEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDP 176 (181)
T ss_dssp GSSBCTTCCCSEEEECCCSCSEEEEEEECCTTTHHHHHHHTCEEEEEEECG
T ss_pred cccCCCCCcceeEEeecCCCCEEEEeCCCCCCCcHHHHhcCCEEEEEECCc
Confidence 1 12345667788999887 5889999996 46899999988876543
|
| >d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=97.72 E-value=7.2e-05 Score=62.15 Aligned_cols=73 Identities=14% Similarity=0.017 Sum_probs=57.1
Q ss_pred EEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCccc---------------------ceeeEeeEEecCCceEE
Q 012467 117 ILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYV---------------------QPFEVDDMDIYSGESYS 175 (463)
Q Consensus 117 ~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v---------------------~P~~~~~l~i~~GeR~d 175 (463)
..+++.|.+.+|+|+|.+. ..+.|+|+++.|+||+.+|... ++..-|++.|.||+.+.
T Consensus 42 ~~~~~~G~~e~W~i~N~~~-~~HP~HiHg~~F~Vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~v~pg~~~~ 120 (154)
T d1gska3 42 TETPKVGTTEIWSIINPTR-GTHPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLR 120 (154)
T ss_dssp CBCCBTTCEEEEEEEECSS-SCEEEEESSCCEEEEEEEEBCHHHHHHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEE
T ss_pred ccccCCCCEEEEEEEeCCC-CCCCEEECCceEEEEEecCCCcccccccccccccCCCcCCCcccCcccccEEeCCCCEEE
Confidence 3567899999999999875 4599999999999998876421 12236899999999999
Q ss_pred EEEecCCCCCCceEEE
Q 012467 176 VLLTTNQDPSYNYWIS 191 (463)
Q Consensus 176 vlV~~~~~~~g~y~ir 191 (463)
|.+++.. .+|.|-+.
T Consensus 121 i~~~~~d-~pG~w~~H 135 (154)
T d1gska3 121 IAATFGP-YSGRYVWH 135 (154)
T ss_dssp EEEECCS-CCEEEEEE
T ss_pred EEEEeCC-CCcceEEe
Confidence 9998654 36776554
|
| >d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=97.67 E-value=4.1e-05 Score=65.32 Aligned_cols=78 Identities=12% Similarity=0.023 Sum_probs=62.7
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.+.++.|++++|.|+|.+... .+.|+++||+|+|++. +|.+ ..|...|++.|.+|+...|-+++
T Consensus 54 ~~~v~~g~~~rlR~iN~~~~~-----~~~~~id~h~~~via~-DG~~----------v~P~~~~~~~i~~GqRydvlv~a 117 (181)
T d2q9oa2 54 NVTLTPGKRHRLRILNTSTEN-----HFQVSLVNHTMTVIAA-DMVP----------VNAMTVDSLFLAVGQRYDVVIDA 117 (181)
T ss_dssp EEEECTTCEEEEEEEECCSSC-----CEEEEETTBCEEEEEE-TTEE----------EEEEEESCEEECTTCEEEEEEEC
T ss_pred EEEECCCCEEEEEEecccCCc-----cEEEEECCceEEEEEe-CCeE----------ccceEeCEEEecCCcEEEEEEeC
Confidence 588999999999999987652 7889999999999998 4543 23567799999999999999999
Q ss_pred CC-ceeeeecccchH
Q 012467 410 DN-PGAWAFHCHIEP 423 (463)
Q Consensus 410 dn-pG~w~~HCHi~~ 423 (463)
+. +|.+-+.-....
T Consensus 118 ~~~~~~Y~ir~~~~~ 132 (181)
T d2q9oa2 118 SRAPDNYWFNVTFGG 132 (181)
T ss_dssp CSCSSEEEEEEECCG
T ss_pred CCCCccEEEEEeccc
Confidence 75 665555544433
|
| >d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=97.62 E-value=3.2e-05 Score=67.97 Aligned_cols=74 Identities=12% Similarity=0.282 Sum_probs=60.7
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
++.++.|++++|.|+|.+... .+.|||+||+|+||+. +|.+ ..|...|.+.|.+|+...|.+++
T Consensus 76 ~~~v~~g~~~RlRliNa~~~~-----~~~~~idgh~~~VIa~-DG~~----------v~P~~v~~l~i~pGqRydvlv~~ 139 (209)
T d1aoza2 76 IFHVSPKKTYRIRIASTTALA-----ALNFAIGNHQLLVVEA-DGNY----------VQPFYTSDIDIYSGESYSVLITT 139 (209)
T ss_dssp CEEECTTCEEEEEEEECCSSC-----EEEEEETTCCEEEEEE-TTEE----------EEEEEESCEEECTTCEEEEEEEC
T ss_pred EEEEcCCCEEEEEEEecCCce-----eEEEEeCCCcEEEEec-CCEE----------cccceeeeEEEccCcEEEEEEEe
Confidence 589999999999999988652 7999999999999998 4543 24677899999999999999999
Q ss_pred CC-ce-eeeecc
Q 012467 410 DN-PG-AWAFHC 419 (463)
Q Consensus 410 dn-pG-~w~~HC 419 (463)
+. +| .|.++-
T Consensus 140 ~~~~~~~y~i~~ 151 (209)
T d1aoza2 140 DQNPSENYWVSV 151 (209)
T ss_dssp CSCTTCCEEEEE
T ss_pred cCCCCCceEEEE
Confidence 76 44 344443
|
| >d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=97.60 E-value=5.6e-05 Score=63.93 Aligned_cols=74 Identities=11% Similarity=0.188 Sum_probs=61.6
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
++.++.|++++|.|+|.+.. ..+-|+++||+|.|++. +|.+ ..|...|++.|.+|++..|-+++
T Consensus 55 ~~~v~~g~~~rlR~iN~~~~-----~~~~~~i~~H~~~via~-DG~~----------v~P~~~~~l~i~~gqR~dvlv~~ 118 (172)
T d1hfua2 55 IVNVEQGKKYRMRLISLSCD-----PNWQFSIDGHELTIIEV-DGEL----------TEPHTVDRLQIFTGQRYSFVLDA 118 (172)
T ss_dssp EEEECTTCEEEEEEEECCSS-----CCEEEEETTCCEEEEEE-TTEE----------EEEEEESBEEECTTCEEEEEEEC
T ss_pred EEEECCCCEEEEEEeeecCC-----ceEEEEeCCCeEEEEEe-CCEE----------cccEEeceEeccCCeEEEEEEEc
Confidence 58999999999999998755 28999999999999997 5543 23677899999999999999999
Q ss_pred CC-ceeeeecc
Q 012467 410 DN-PGAWAFHC 419 (463)
Q Consensus 410 dn-pG~w~~HC 419 (463)
++ +|.+-+.+
T Consensus 119 ~~~~~~Y~ira 129 (172)
T d1hfua2 119 NQPVDNYWIRA 129 (172)
T ss_dssp CSCSSEEEEEE
T ss_pred CCCCCcEEEEE
Confidence 87 57644443
|
| >d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=97.59 E-value=8.2e-05 Score=62.75 Aligned_cols=72 Identities=17% Similarity=0.209 Sum_probs=60.5
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
++.++.|++++|.|+|.+.. ..+-|+++||+|.||+. +|.+ ..|...|++.|.+|+...|.+++
T Consensus 57 ~~~v~~g~~~rlRlIN~~~~-----~~~~~~id~h~~~via~-DG~~----------v~P~~~d~l~i~~gqRydvlv~~ 120 (170)
T d1gyca2 57 VINVQHGKRYRFRLVSISCD-----PNYTFSIDGHNLTVIEV-DGIN----------SQPLLVDSIQIFAAQRYSFVLNA 120 (170)
T ss_dssp EEEECTTCEEEEEEEECCSS-----CCEEEEETTCCEEEEEE-TTEE----------EEEEEESBEEECTTCEEEEEEEC
T ss_pred EEEECCCCEEEEEEeecCCC-----ceeeEEeCCCeEEEEEe-CCee----------ccceEeeEEEecCCeEEEEEEeC
Confidence 68999999999999998754 28999999999999998 4543 23567799999999999999999
Q ss_pred CC-ceeeee
Q 012467 410 DN-PGAWAF 417 (463)
Q Consensus 410 dn-pG~w~~ 417 (463)
+. +|.+.+
T Consensus 121 ~~~~~~y~i 129 (170)
T d1gyca2 121 NQTVGNYWI 129 (170)
T ss_dssp CSCSSEEEE
T ss_pred CCCCCcEEE
Confidence 75 776444
|
| >d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Rusticyanin species: Thiobacillus ferrooxidans [TaxId: 920]
Probab=97.46 E-value=5.1e-05 Score=63.07 Aligned_cols=77 Identities=8% Similarity=-0.111 Sum_probs=59.4
Q ss_pred eEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccc-eeeEeeEEecCCceEEEEEecCCCCCCceEEEEE
Q 012467 116 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQ-PFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAG 193 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~-P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~ 193 (463)
|+|+|++|++++|+|+|.+....+.|.|..|.+.+.+.++.... +...+...+.|||++.+.++... .+|.||..-.
T Consensus 60 Pti~v~~Gd~V~i~v~N~~~~~~H~~~ih~~g~~~~~~~~~~~~~~~~~~~~~v~pg~~~~~~f~~~~-~pGty~YhCh 137 (153)
T d1e30a_ 60 PTLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTNFTWHP-TAGTYYYVCQ 137 (153)
T ss_dssp CEEEECTTCEEEEEEEECCTTCCCCCEEESCCSSCCSSCCCCSEEEEBCCCCCCBTTEEEEEEEEECC-CSEEEEEECC
T ss_pred CeEEEeCCCEEEEEEEeCCCCCcccEEEEcCCCCccccccccccCCCccceeeecCCCEEEEEEEeCC-CCeEEEEeCC
Confidence 58999999999999999876666778888777666666665432 33445667899999999998654 5799998754
|
| >d2q5ba1 b.6.1.1 (A:1-105) Plastocyanin {Cyanobacterium (Phormidium laminosum) [TaxId: 32059]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Phormidium laminosum) [TaxId: 32059]
Probab=97.28 E-value=6.3e-05 Score=58.15 Aligned_cols=83 Identities=13% Similarity=0.093 Sum_probs=55.9
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.++++.|++|+|+ |.+.. .|..++....+.. +.. .. ......++..+.++....+.|.+
T Consensus 20 ~l~v~~GdtV~f~--n~~~~------~h~~~~~~~~~~~-----~~~-~~-------~~~~~~~~~~~~~g~~~~~~f~~ 78 (105)
T d2q5ba1 20 NVTVHPGDTVKWV--NNKLP------PHNILFDDKQVPG-----ASK-EL-------ADKLSHSQLMFSPGESYEITFSS 78 (105)
T ss_dssp EEEECTTEEEEEE--ECSSC------CEEEEECGGGSGG-----GCH-HH-------HHHHCEEEEECSTTCEEEEEECT
T ss_pred EEEECCCCEEEEE--ECCCC------CceeEeecCcccc-----ccc-cc-------CCccccccccccCCceEEEEEEe
Confidence 4899999999875 54443 5655544333211 000 00 00124577788899999999985
Q ss_pred -CCceeeeecccchHhHHccceeeeec
Q 012467 410 -DNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 410 -dnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
+.||.|.|+|.. |...||.+.+.+
T Consensus 79 ~~~~G~y~y~C~~--H~~~GM~G~I~V 103 (105)
T d2q5ba1 79 DFPAGTYTYYCAP--HRGAGMVGKITV 103 (105)
T ss_dssp TSCSEEEEEECST--TGGGTCEEEEEE
T ss_pred ccCCceEEEEeCC--CCCCCCEEEEEE
Confidence 579999999975 999999988854
|
| >d2cuaa_ b.6.1.2 (A:) Cytochrome c oxidase {Thermus thermophilus, ba3 type [TaxId: 274]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Periplasmic domain of cytochrome c oxidase subunit II domain: Cytochrome c oxidase species: Thermus thermophilus, ba3 type [TaxId: 274]
Probab=97.24 E-value=0.00045 Score=54.64 Aligned_cols=69 Identities=16% Similarity=0.342 Sum_probs=52.9
Q ss_pred EEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcC
Q 012467 331 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 410 (463)
Q Consensus 331 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~ad 410 (463)
+.++.|+.|.|.|.|.+. .|.|.+-+.. =.+.+.||....+.|+++
T Consensus 49 l~vp~G~~V~~~lts~DV-------~H~f~ip~~~---------------------------v~~d~~PG~~~~~~~~~~ 94 (122)
T d2cuaa_ 49 IEVPQGAEIVFKITSPDV-------IHGFHVEGTN---------------------------INVEVLPGEVSTVRYTFK 94 (122)
T ss_dssp EEEETTSEEEEEEEBSSS-------CEEEEETTSS---------------------------CEEEECBTBCEEEEEECC
T ss_pred EEEeCCCEEEEEEEcCCc-------cceeEecCCC---------------------------eeEEEecCceEEEEEEec
Confidence 889999999999999874 4655432221 123466899999999999
Q ss_pred Cceeeeecccc---hHhHHccceeeeec
Q 012467 411 NPGAWAFHCHI---EPHFHIGMGVVLAL 435 (463)
Q Consensus 411 npG~w~~HCHi---~~H~~~GM~~~~~~ 435 (463)
+||.+.+.|+. ..|. +|.+.+.+
T Consensus 95 ~~G~y~~~C~~~CG~~H~--~M~g~i~V 120 (122)
T d2cuaa_ 95 RPGEYRIICNQYCGLGHQ--NMFGTIVV 120 (122)
T ss_dssp SCEEEEEECCSCCSTTST--TCEEEEEE
T ss_pred cceeEEEEehhccCCCcc--cCeEEEEE
Confidence 99999999997 5674 78777654
|
| >d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=97.16 E-value=0.00034 Score=56.06 Aligned_cols=73 Identities=10% Similarity=0.140 Sum_probs=50.1
Q ss_pred eEEEecCCCeEEEEEEecCcceEEEEEEeCceeEE-EEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEe
Q 012467 116 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVV-VEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 194 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~v-ia~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~ 194 (463)
|+|.++.|+++++||.|-.......++..+..+.. -..||..- +....|.|||++++.+++++ +|+||.....
T Consensus 34 P~i~v~~GD~v~i~l~N~l~~~~~~iH~Hg~~~~~~~~~~~~~~----~~~~~I~PG~s~~y~f~a~~--~Gt~~YH~H~ 107 (129)
T d1aoza1 34 PTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTAS----ISQCAINPGETFFYNFTVDN--PGTFFYHGHL 107 (129)
T ss_dssp CCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEECCS--CEEEEEEECS
T ss_pred CeEEEECCcEEEEEEEeCCCCCCeeeeeccceeeccCccccccc----cccceECCCCEEEEEEECCC--CCceEEecCC
Confidence 57999999999999999755444455555543211 11233321 22345899999999999986 6999998764
|
| >d1pcsa_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]
Probab=97.12 E-value=0.00018 Score=54.79 Aligned_cols=78 Identities=13% Similarity=0.122 Sum_probs=47.9
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.++++.|++|.|+ |.+.. .|.+..+.. +..... .. ...-+...+.+|.... +++
T Consensus 20 ~i~v~~GdtV~~~--n~~~~------~H~~~~~~~---------~~~~~~-~~------~~~~~~~~~~~g~t~~--~tf 73 (98)
T d1pcsa_ 20 TVTIKAGEEVKWV--NNKLS------PHNIVFDAD---------GVPADT-AA------KLSHKGLLFAAGESFT--STF 73 (98)
T ss_dssp EEEECTTCEEEEE--ECSSC------CEEEEECCS---------SSCHHH-HH------HHCEEEEECSTTCEEE--EEC
T ss_pred EEEECCCCEEEEe--ECCCC------ccceEEecc---------ccCCCc-cc------cccccccccCCCcEEE--Eec
Confidence 4899999999997 55444 554332211 110000 00 0112344556676544 456
Q ss_pred CCceeeeecccchHhHHccceeeeec
Q 012467 410 DNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 410 dnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
+.||.+.|+|.. |...||.+.|.+
T Consensus 74 ~~~G~y~Y~C~~--H~~~gM~G~I~V 97 (98)
T d1pcsa_ 74 TEPGTYTYYCEP--HRGAGMVGKVVV 97 (98)
T ss_dssp CSCEEEEEECGG--GTTTTCEEEEEE
T ss_pred cCCceEEEEecc--CCCCCCEEEEEE
Confidence 889999999964 999999988864
|
| >d1mzya2 b.6.1.3 (A:194-371) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=97.07 E-value=0.0018 Score=53.46 Aligned_cols=90 Identities=21% Similarity=0.162 Sum_probs=69.6
Q ss_pred ceEEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCcc--ceEEeCCCcEEEE
Q 012467 328 SGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLK--NTAVIFPYGWTAL 405 (463)
Q Consensus 328 ~~~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~r--DTv~v~~~g~~~i 405 (463)
...++++.|++|.+ +...... .=.||+-|-.|-.+-. .|.+ .|++.+ -|+.|++|+-.++
T Consensus 69 ~~aL~AkvGEtV~~-~~~gpN~------~SsfHvIGg~~D~V~~-~G~~----------~n~p~~~~qT~~v~~G~a~~~ 130 (178)
T d1mzya2 69 EGALKAKVGDNVLF-VHSQPNR------DSRPHLIGGHGDLVWE-TGKF----------HNAPERDLETWFIRGGTAGAA 130 (178)
T ss_dssp GGCEEEETTCEEEE-EEEESSS------CBCEEEETCCEEEEET-TCCT----------TSCCEEEESBCCBCTTEEEEE
T ss_pred CCCcccccCCeEEE-ecccCCC------CCCcccccCccceEcc-CCcc----------CCCCCCCceEEEecCCceeEE
Confidence 34589999999953 4333333 7889999999975553 4554 345555 5899999999999
Q ss_pred EEEcCCceeeeecccchHh-HHccceeeeec
Q 012467 406 RFVADNPGAWAFHCHIEPH-FHIGMGVVLAL 435 (463)
Q Consensus 406 rf~adnpG~w~~HCHi~~H-~~~GM~~~~~~ 435 (463)
.|++..||.+.|--|.+.- +..|.+++|.+
T Consensus 131 ~~tf~~PG~Y~~VdH~l~~A~~kGA~g~l~V 161 (178)
T d1mzya2 131 LYKFLQPGVYAYVNHNLIEAVHKGATAHVLV 161 (178)
T ss_dssp EEECCSCEEEEEEESSHHHHHTTCCEEEEEE
T ss_pred EEEeCCCeEEEEEccHHHHHHhCCCeEEEEe
Confidence 9999999999999999865 68899888864
|
| >d2plta_ b.6.1.1 (A:) Plastocyanin {Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=97.05 E-value=0.00029 Score=53.49 Aligned_cols=79 Identities=14% Similarity=0.196 Sum_probs=48.7
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.++++.|++|.|+ |.+.. .|.++.+....- ..... +....+.....++.. +++++
T Consensus 19 ~i~v~~GdtV~f~--n~~~~------~h~~~~~~~~~~------~~~~~---------~~~~~~~~~~~~~~t--~~~tf 73 (98)
T d2plta_ 19 TLTIKSGETVNFV--NNAGF------PHNIVFDEDAIP------SGVNA---------DAISRDDYLNAPGET--YSVKL 73 (98)
T ss_dssp EEEECTTCEEEEE--ECSSC------CEEEEECGGGSC------TTCCH---------HHHCEEEEECSTTCE--EEEEC
T ss_pred EEEECCCCEEEEE--ECCCC------ceeEEEecCCcc------ccccC---------CcccccccccCCCce--EEEEe
Confidence 4899999999886 54443 565544432110 00000 001223444444554 56677
Q ss_pred CCceeeeecccchHhHHccceeeeec
Q 012467 410 DNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 410 dnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
+.||.+.|+|. .|...||.+.|.+
T Consensus 74 ~~~G~y~y~C~--~H~~~GM~G~I~V 97 (98)
T d2plta_ 74 TAAGEYGYYCE--PHQGAGMVGKIIV 97 (98)
T ss_dssp CSCEEEEEECG--GGGGGTCEEEEEE
T ss_pred cCCceEEEEeC--cCCCCCCEEEEEE
Confidence 89999999997 4999999988865
|
| >d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=96.87 E-value=0.00053 Score=56.98 Aligned_cols=66 Identities=12% Similarity=0.190 Sum_probs=47.8
Q ss_pred eEEEecCCCeEEEEEEecCcc-eEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEE
Q 012467 116 QILHVQPNKTYRLRIASTTAL-ASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAG 193 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~-~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~ 193 (463)
|+|+++.|+++|++|.|.... ..+.|++.+.. .+.+|.... .|.|||++++.+++++ +|+||....
T Consensus 65 PtI~v~~Gd~v~v~~~N~~~~~h~h~ih~hg~~---~~~~g~~~~-------~I~PG~t~ty~f~a~~--~Gt~~yH~H 131 (159)
T d1oe2a1 65 PTLVVHEGDYVQLTLVNPATNAMPHNVEFHGAT---GALGGAKLT-------NVNPGEQATLRFKADR--SGTFVYHCA 131 (159)
T ss_dssp CCEEEETTCEEEEEEEECTTCCSCBCCEETTSC---SGGGGGGGC-------CBCTTEEEEEEEECCS--CEEEEEECC
T ss_pred CeEEEECCcEEEEEEECCCccccccceeecccc---CCCCCcccc-------cCCCCCeEEEEEEcCC--CceEEEEeC
Confidence 479999999999999997643 34556666543 122333322 3789999999999976 799998754
|
| >d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=96.79 E-value=0.0027 Score=54.60 Aligned_cols=76 Identities=13% Similarity=0.294 Sum_probs=63.3
Q ss_pred eEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCccc----ceeeEeeEEe-cCCceEEEEEecCCCCCCceEE
Q 012467 116 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYV----QPFEVDDMDI-YSGESYSVLLTTNQDPSYNYWI 190 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v----~P~~~~~l~i-~~GeR~dvlV~~~~~~~g~y~i 190 (463)
.++.++.|+.+.+-++|......+.|+++||+|+|++.+|... .|...|++.+ .+|++..+.+.++. +|.|-+
T Consensus 70 ~v~~~~~~~~~~~v~~~~~~~~~Hp~HlHg~~F~vl~~~g~~~~~~~~~~~rDtv~v~~~G~~~~ir~~adn--pG~w~~ 147 (200)
T d1hfua3 70 SVYELPRNQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTDN--PGPWFF 147 (200)
T ss_dssp SEEEECSSCEEEEEEECCSTTCCCEEEETTCCEEEEECTTCCCCCCSSBCEESEEECCSTTCEEEEEEECCS--CEEEEE
T ss_pred ceEEecCCcceEEEEeeccccccCceeecCCcEEEEeccCCCCCccccCcccceEEeCCCCEEEEEEEECCC--CeeeEE
Confidence 4789999999999999998778899999999999999999764 4777899999 57888888888775 677766
Q ss_pred EEE
Q 012467 191 SAG 193 (463)
Q Consensus 191 r~~ 193 (463)
+=.
T Consensus 148 HCH 150 (200)
T d1hfua3 148 HCH 150 (200)
T ss_dssp EES
T ss_pred EeC
Confidence 543
|
| >d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=96.78 E-value=0.0025 Score=55.45 Aligned_cols=75 Identities=5% Similarity=0.083 Sum_probs=62.6
Q ss_pred EEEecCCCeEEEEEEecCcc-----eEEEEEEeCceeEEEEeCCccc-----------ceeeEeeEEecCCceEEEEEec
Q 012467 117 ILHVQPNKTYRLRIASTTAL-----ASLNLAVKNHKMVVVEADGNYV-----------QPFEVDDMDIYSGESYSVLLTT 180 (463)
Q Consensus 117 ~~~v~~g~~~RlRliNa~~~-----~~~~~~i~~h~~~via~DG~~v-----------~P~~~~~l~i~~GeR~dvlV~~ 180 (463)
++.++.|+++++.|.|.+.. ..+.|+++||.|+||+.+++.. .|...|++.+.+|+.+.+.+++
T Consensus 80 v~~~~~g~~veivl~n~~~~~~~~~~~HP~HlHG~~F~vl~~~~g~~~~~~~~~~n~~~p~~rDTv~v~~g~~~~ir~~a 159 (214)
T d1aoza3 80 VYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVA 159 (214)
T ss_dssp CEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEEC
T ss_pred eEEecCCCEEEEEEeccccccCCCCCCcceEeecceeEEeccCCCcccccccccccccCCceecCcccCCCceEEEEEec
Confidence 68999999999999998643 4589999999999999987654 3566789999999999999999
Q ss_pred CCCCCCceEEEEE
Q 012467 181 NQDPSYNYWISAG 193 (463)
Q Consensus 181 ~~~~~g~y~ir~~ 193 (463)
+. +|.|-++-.
T Consensus 160 dn--pG~w~~HCH 170 (214)
T d1aoza3 160 DN--PGVWAFHCH 170 (214)
T ss_dssp CS--CEEEEEEES
T ss_pred CC--CeeEEEEEC
Confidence 85 677766643
|
| >d1bxua_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]
Probab=96.74 E-value=0.0025 Score=47.33 Aligned_cols=71 Identities=17% Similarity=0.208 Sum_probs=47.8
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.+.++.|++|+|+ |.+.. .|-+... +... ..-+...+.+|... ++.+
T Consensus 20 ~i~I~~GdtV~f~--n~d~~------~h~~~~~---------~~~~--------------~~~~~~~~~~g~~~--~~tF 66 (91)
T d1bxua_ 20 TIEIQAGDTVQWV--NNKLA------PHNVVVE---------GQPE--------------LSHKDLAFSPGETF--EATF 66 (91)
T ss_dssp EEEECTTCEEEEE--ECSSC------CEEEEET---------TCGG--------------GCEEEEECSTTCEE--EEEC
T ss_pred EEEECCCCEEEEE--ECCcC------CceEEec---------cccc--------------ccccccccCCCCCE--EEEe
Confidence 4899999999985 65543 3422211 1111 22355666677754 4666
Q ss_pred CCceeeeecccchHhHHccceeeeec
Q 012467 410 DNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 410 dnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
+.||.+.|+|.. |...||.+.+.+
T Consensus 67 ~~~G~y~Y~C~~--H~~~gM~G~I~V 90 (91)
T d1bxua_ 67 SEPGTYTYYCEP--HRGAGMVGKIVV 90 (91)
T ss_dssp CSCEEEEEECTT--TGGGTCEEEEEE
T ss_pred ccCceEEEEeCC--CCCCCCEEEEEE
Confidence 899999999965 999999888754
|
| >d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=96.60 E-value=0.0013 Score=54.75 Aligned_cols=74 Identities=8% Similarity=-0.034 Sum_probs=52.6
Q ss_pred eEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEE-EeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEe
Q 012467 116 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVV-EADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 194 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~vi-a~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~ 194 (463)
|+|++++|++++++|.|-.......++.+|+.+... ..||..... ....+.+|+++...+.+++ +|+||.....
T Consensus 67 PtI~~~~Gd~v~v~l~N~l~~~~~~ih~Hg~~~~~~~~~~g~~~~~---~~~i~~pg~~~~y~f~~~~--~Gt~wYH~H~ 141 (162)
T d2q9oa1 67 PNIVANWGDTVEVTVINNLVTNGTSIHWHGIHQKDTNLHDGANGVT---ECPIPPKGGQRTYRWRARQ--YGTSWYHSHF 141 (162)
T ss_dssp CCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCCBTTT---BCCBCTTTEEEEEEEECCS--CEEEEEEECS
T ss_pred CeEEEECCcEEEEEEEecCcccccccccccccccCCCcCCCCcccc---cceecCCCCEEEeeecCCC--CEEEEeecCC
Confidence 579999999999999997655555566666544321 344443321 2234688999999999986 6999998764
|
| >d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=96.58 E-value=0.0013 Score=53.24 Aligned_cols=69 Identities=22% Similarity=0.254 Sum_probs=52.5
Q ss_pred eEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEe
Q 012467 116 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 194 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~ 194 (463)
|+|.+++|+++++++.|... ....++.+|.... -+.||++.. .+.||++++..+++++ ++|.||.....
T Consensus 46 P~i~~~~Gd~v~v~~~N~l~-~~~siH~HG~~~~-~~~dG~~~~-------~i~pg~~~~y~~~~~~-~aGt~wyH~H~ 114 (140)
T d1kv7a1 46 PAVKLQRGKAVTVDIYNQLT-EETTLHWHGLEVP-GEVDGGPQG-------IIPPGGKRSVTLNVDQ-PAATCWFHPHQ 114 (140)
T ss_dssp CEEEEETTCEEEEEEEECSS-SCBCCEEETCCCC-GGGSCCTTC-------CBCTTCEEEEEEECCS-CSEEEEEECCC
T ss_pred ceEEEECCCEEEEEEEeCcc-ccccEeeeeeecC-CccCCCccc-------eEccCCceeEEEEEec-CCeeEEEEECC
Confidence 58999999999999999874 3456666664331 256776533 3789999999999987 57999987653
|
| >d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=96.57 E-value=0.0018 Score=53.55 Aligned_cols=66 Identities=11% Similarity=0.132 Sum_probs=43.6
Q ss_pred eEEEecCCCeEEEEEEecCcc-eEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEE
Q 012467 116 QILHVQPNKTYRLRIASTTAL-ASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAG 193 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~-~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~ 193 (463)
|+|++++|+++|+||+|-... ..+.+++.+ +.|+..-... -.|.|||++++.+++++ +|.||....
T Consensus 64 P~I~v~~GD~V~i~l~N~~~~~~~Hg~~~h~------~~~~~~~~~~----~~i~PGet~ty~f~a~~--pGt~~YH~H 130 (157)
T d2bw4a1 64 PLMVVHENDYVELRLINPDTNTLLHNIDFHA------ATGALGGGAL----TQVNPGEETTLRFKATK--PGVFVYHCA 130 (157)
T ss_dssp CEEEEETTCEEEEEEEECTTCCSCBCCEETT------SCSGGGGGGG----CCBCTTEEEEEEEECCS--CEEEEEECC
T ss_pred ceEEEECCcEEEEEEEeCCCCcceEeeeecc------cCCCcCCcce----eeECcCCEEeEEEECCC--CccceEEEC
Confidence 589999999999999995432 112223322 1232221111 13789999999999975 799998754
|
| >d1ibya_ b.6.1.4 (A:) Red copper protein nitrosocyanin {Nitrosomonas europaea [TaxId: 915]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Red copper protein nitrosocyanin species: Nitrosomonas europaea [TaxId: 915]
Probab=96.50 E-value=0.0046 Score=47.81 Aligned_cols=58 Identities=14% Similarity=0.240 Sum_probs=45.9
Q ss_pred eEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEE
Q 012467 116 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA 192 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~ 192 (463)
..|+|+.|++++|+|.|... ..+.|.|+++.+ ...+.|||...+-+++++ +|.|+..-
T Consensus 38 ~~i~v~~Gd~V~~~~~n~d~-~~H~~~i~~~~~----------------~~~~~pG~t~~~~f~~~~--~G~y~y~C 95 (112)
T d1ibya_ 38 ETLVVKKGDAVKVVVENKSP-ISEGFSIDAFGV----------------QEVIKAGETKTISFTADK--AGAFTIWC 95 (112)
T ss_dssp CEEEEETTCEEEEEEEECSS-SCEEEEEGGGTE----------------EEEECTTCEEEEEEECCS--CEEEEEBC
T ss_pred CEEEEeCCCEEEEEEEeCCC-Cceeeeeccccc----------------ccccCCcceEEEEEEecc--ceEEEEEC
Confidence 47999999999999999873 346677776643 245789999999999986 69998853
|
| >d1pmya_ b.6.1.1 (A:) Pseudoazurin {Methylobacterium extorquens, strain am1 [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Methylobacterium extorquens, strain am1 [TaxId: 408]
Probab=96.48 E-value=0.00079 Score=53.33 Aligned_cols=31 Identities=26% Similarity=0.582 Sum_probs=27.1
Q ss_pred EEEEcCCceeeeecccchHhHHccceeeeeccc
Q 012467 405 LRFVADNPGAWAFHCHIEPHFHIGMGVVLALGV 437 (463)
Q Consensus 405 irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~ 437 (463)
+.++++.||.|.|+|.+ |..+||.+.+.++.
T Consensus 64 ~~~tF~~~G~Y~Y~C~p--H~~~GM~G~I~Vgd 94 (123)
T d1pmya_ 64 AVVKFDKEGVYGFKCAP--HYMMGMVALVVVGD 94 (123)
T ss_dssp EEEECCSCEEEEEECST--TTTTTCEEEEEESS
T ss_pred cccccCCCceEEEEecc--CCCCCCEEEEEECC
Confidence 55778999999999976 99999999998765
|
| >d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=96.46 E-value=0.0034 Score=50.01 Aligned_cols=74 Identities=14% Similarity=0.171 Sum_probs=49.9
Q ss_pred eEEEecCCCeEEEEEEecCcc----eEEEEEEeCceeEE-EEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEE
Q 012467 116 QILHVQPNKTYRLRIASTTAL----ASLNLAVKNHKMVV-VEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWI 190 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~----~~~~~~i~~h~~~v-ia~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~i 190 (463)
|+|.+++|++++++|.|-... ....++.+|-.+.. -..||.+- +..-.|.||+.|+..++..+ ..|.||.
T Consensus 34 P~I~v~~GD~v~v~l~N~l~~~~~~~~tsiH~HGl~~~~~~~~dgv~g----~~~~~I~PG~~~~y~~~~~~-~~Gt~wY 108 (131)
T d1hfua1 34 PLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADG----VNQCPISPGHAFLYKFTPAG-HAGTFWY 108 (131)
T ss_dssp CEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEECCTT-CCEEEEE
T ss_pred CeEEEECCCEEEEEEEECCCCccccccceEEeCCcccCCCCCCCCCcc----cccceECCCCeEEEEEeCCC-CcceEEE
Confidence 489999999999999996542 33556666632210 11244322 12245899999999998654 4799999
Q ss_pred EEEe
Q 012467 191 SAGV 194 (463)
Q Consensus 191 r~~~ 194 (463)
....
T Consensus 109 H~H~ 112 (131)
T d1hfua1 109 HSHF 112 (131)
T ss_dssp EECS
T ss_pred ecCC
Confidence 8764
|
| >d1plca_ b.6.1.1 (A:) Plastocyanin {Poplar (Populus nigra), variant italica [TaxId: 3691]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Poplar (Populus nigra), variant italica [TaxId: 3691]
Probab=96.45 E-value=0.0014 Score=49.67 Aligned_cols=81 Identities=14% Similarity=0.152 Sum_probs=48.5
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.++++.|++|+|+ |.+.. .|.+......+- .+. .... .. ...+.....+|....+ ++
T Consensus 18 ~iti~~GdtV~f~--n~~~~------~Hnv~~~~~~~~-----~~~-~~~~-~~------~~~~~~~~~~g~t~~~--tF 74 (99)
T d1plca_ 18 EFSISPGEKIVFK--NNAGF------PHNIVFDEDSIP-----SGV-DASK-IS------MSEEDLLNAKGETFEV--AL 74 (99)
T ss_dssp EEEECTTCEEEEE--ECSSC------CBCCEECTTSSC-----TTC-CHHH-HC------CCTTCCBCSTTCEEEE--EC
T ss_pred EEEECCCCEEEEE--ECCCC------CccEEEccCcCC-----Ccc-cccc-Cc------ccccccccCCCceEEE--ec
Confidence 4899999999984 65544 677543322110 000 0000 00 1112233446765544 55
Q ss_pred CCceeeeecccchHhHHccceeeeec
Q 012467 410 DNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 410 dnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
+.||.+.|+|- .|...||.+.+.+
T Consensus 75 ~~~G~y~Y~C~--pH~~~GM~G~I~V 98 (99)
T d1plca_ 75 SNKGEYSFYCS--PHQGAGMVGKVTV 98 (99)
T ss_dssp CSCEEEEEECG--GGTTTTCEEEEEE
T ss_pred CCCceEEEEeC--CCcCCCcEEEEEE
Confidence 78999999994 6999999998865
|
| >d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=96.43 E-value=0.0025 Score=50.74 Aligned_cols=74 Identities=16% Similarity=0.220 Sum_probs=48.4
Q ss_pred eEEEecCCCeEEEEEEecCcc----eEEEEEEeCceeEEE-EeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEE
Q 012467 116 QILHVQPNKTYRLRIASTTAL----ASLNLAVKNHKMVVV-EADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWI 190 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~----~~~~~~i~~h~~~vi-a~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~i 190 (463)
|+|.+++|+++++||.|.... ....++.+|..+.-- ..||.. ......|.|||.++..+++.+ .+|.||.
T Consensus 34 PtI~~~~GD~v~v~~~N~~~~~~~~~~~~iH~HG~~~~~~~~~d~~~----~~s~~~i~PG~s~~Y~~~~~~-~~Gt~wY 108 (130)
T d1gyca1 34 PLITGKKGDRFQLNVVDTLTNHTMLKSTSIHWHGFFQAGTNWADGPA----FVNQCPIASGHSFLYDFHVPD-QAGTFWY 108 (130)
T ss_dssp CCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCB----TTTBCCBCTTEEEEEEEECSS-CCEEEEE
T ss_pred CeEEEECCeEEEEEEEecCCCcccCCceeEEeccccccccCCCCCcc----ccccCCCCCCCeEEEEEECCC-CCceeEE
Confidence 589999999999999998642 233445444322100 122211 112235899999999999875 5799998
Q ss_pred EEEe
Q 012467 191 SAGV 194 (463)
Q Consensus 191 r~~~ 194 (463)
....
T Consensus 109 H~H~ 112 (130)
T d1gyca1 109 HSHL 112 (130)
T ss_dssp EECS
T ss_pred ecCC
Confidence 8653
|
| >d2jxma1 b.6.1.1 (A:1-97) Plastocyanin {Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]
Probab=96.35 E-value=0.0017 Score=48.86 Aligned_cols=30 Identities=23% Similarity=0.451 Sum_probs=25.4
Q ss_pred EEEEEcCCceeeeecccchHhHHccceeeeec
Q 012467 404 ALRFVADNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 404 ~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
.+.++++.||.+.|+|-. |...||.+.+.+
T Consensus 67 ~~~~tf~~~G~y~Y~C~~--H~~~GM~G~I~V 96 (97)
T d2jxma1 67 FYSVTLGTPGTYSFYCTP--HRGAGMVGTITV 96 (97)
T ss_dssp CEEEECCSCSEEEEECSS--TTTTTCEEEEEE
T ss_pred EEEEecCCCeEEEEEEcc--CCCCCCEEEEEE
Confidence 567778899999999964 999999988864
|
| >d1sddb1 b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=96.34 E-value=0.001 Score=46.30 Aligned_cols=40 Identities=25% Similarity=0.380 Sum_probs=33.4
Q ss_pred eCCCcEEEEEEEcCCce----------eeeecccchH--hHHccceeeeecc
Q 012467 397 IFPYGWTALRFVADNPG----------AWAFHCHIEP--HFHIGMGVVLALG 436 (463)
Q Consensus 397 v~~~g~~~irf~adnpG----------~w~~HCHi~~--H~~~GM~~~~~~~ 436 (463)
|.||++.+.+|++...| .|+||||+.. +...||.+.|++-
T Consensus 3 V~PG~t~tY~w~v~~~~gp~~~d~~c~t~~YHsHv~~~~q~~~GL~G~liV~ 54 (67)
T d1sddb1 3 IQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPEKDIHSGLIGPLLIC 54 (67)
T ss_dssp BCTTCCEECCEECCTTTSCCSSSCSEEEEEEECCSSHHHHHTTTCEEEEEEE
T ss_pred CCCCCeEEEEEEcCCcCCCccCCCCceeEEEEcccchHHHhhCCceEEEEEc
Confidence 67899999999987654 8999999965 7788999888654
|
| >d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=96.21 E-value=0.0026 Score=51.01 Aligned_cols=74 Identities=12% Similarity=0.218 Sum_probs=50.9
Q ss_pred eEEEecCCCeEEEEEEecCcc----eEEEEEEeCcee-EEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEE
Q 012467 116 QILHVQPNKTYRLRIASTTAL----ASLNLAVKNHKM-VVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWI 190 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~----~~~~~~i~~h~~-~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~i 190 (463)
|+|++++|+++++|+.|-... ....++.+|-.. .-...||.+- +....|.||+.+...+++.+ ..|.||.
T Consensus 34 P~i~~~~GD~v~v~~~N~l~~~~~~~~tsiH~HGl~~~~~~~~dgv~~----~t~~~I~PG~~~~Y~~~~~~-~~Gt~wY 108 (136)
T d1v10a1 34 PLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPAF----VNQCPIIPNESFVYDFVVPG-QAGTYWY 108 (136)
T ss_dssp CCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGSCCBT----TTBCCBCTTEEEEEEEECTT-CCEEEEE
T ss_pred CeEEEECCcEEEEEEEeCCCCcccCcceeEEecccccccccccCCCCc----cccceECCCCeEEEEEECCC-CccceEE
Confidence 589999999999999997542 344566665221 0122355432 22345899999999999876 4799999
Q ss_pred EEEe
Q 012467 191 SAGV 194 (463)
Q Consensus 191 r~~~ 194 (463)
....
T Consensus 109 H~H~ 112 (136)
T d1v10a1 109 HSHL 112 (136)
T ss_dssp EECS
T ss_pred ecCc
Confidence 8764
|
| >d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=96.21 E-value=0.0034 Score=51.48 Aligned_cols=66 Identities=12% Similarity=0.108 Sum_probs=44.2
Q ss_pred eEEEecCCCeEEEEEEecCc-ceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEE
Q 012467 116 QILHVQPNKTYRLRIASTTA-LASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAG 193 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~-~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~ 193 (463)
|+|+++.|+++|+|+.|-.. ...+.+.+.+.. ..||.... -.|.|||++++.+++++ +|.||....
T Consensus 62 Pti~v~~Gd~v~i~~~N~~~~~~~H~~~~h~~~----~~~~~~~~------~~i~PG~t~ty~f~a~~--~Gt~~YH~H 128 (153)
T d1mzya1 62 PLMIVHEGDYVELTLINPPENTMPHNIDFHAAT----GALGGGGL------TLINPGEKVVLRFKATR--AGAFVYHCA 128 (153)
T ss_dssp CEEEEETTCEEEEEEEECTTCCSCBCCEETTSC----SGGGGGGG------CCBCTTEEEEEEEECCS--CEEEEEECC
T ss_pred CcEEEeCCCEEEEEEEcCCCCceEccCccccCC----cCCCCCcc------ccccCCCEEEEEEEcCC--CceEEEEeC
Confidence 58999999999999999532 222333333321 12222211 14789999999999976 699998754
|
| >d1paza_ b.6.1.1 (A:) Pseudoazurin {Alcaligenes faecalis, strain s-6 [TaxId: 511]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Alcaligenes faecalis, strain s-6 [TaxId: 511]
Probab=96.19 E-value=0.0032 Score=49.31 Aligned_cols=31 Identities=29% Similarity=0.660 Sum_probs=26.6
Q ss_pred EEEEcCCceeeeecccchHhHHccceeeeeccc
Q 012467 405 LRFVADNPGAWAFHCHIEPHFHIGMGVVLALGV 437 (463)
Q Consensus 405 irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~ 437 (463)
..++++.||.|.|+|-. |..+||.+.+.++.
T Consensus 64 ~s~tF~~~G~y~Y~Ctp--H~~~GM~G~I~Vg~ 94 (120)
T d1paza_ 64 YVLTVTQPGAYLVKCTP--HYAMGMIALIAVGD 94 (120)
T ss_dssp EEEECCSCEEEEEECTT--TGGGTCEEEEEESS
T ss_pred EEEEecCCCeEEEEEee--CCCCCCEEEEEECC
Confidence 45667899999999974 99999999998875
|
| >d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Probab=96.15 E-value=0.0038 Score=51.12 Aligned_cols=66 Identities=11% Similarity=0.133 Sum_probs=43.5
Q ss_pred eEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEE-EeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEE
Q 012467 116 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVV-EADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAG 193 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~vi-a~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~ 193 (463)
++|.++.|+++++|+.|-.... ++.++.+... ..||..... .+.|||++++.+++++ +|.||....
T Consensus 58 P~i~v~~Gd~v~v~~~N~~~~~----~~H~~~~h~~~~~~~~~~~~------~i~PG~t~~y~f~a~~--~Gt~~YH~H 124 (151)
T d1kbva1 58 RMIRVREGDTVEVEFSNNPSST----VPHNVDFHAATGQGGGAAAT------FTAPGRTSTFSFKALQ--PGLYIYHCA 124 (151)
T ss_dssp CBEEEETTCEEEEEEEECTTCS----SCBCCEETTCCSGGGGTTTT------CBCTTEEEEEEEECCS--CEEEEEECC
T ss_pred CeEEEECCCEEEEEEEcCCCCc----eeeeccccccccCCCCccee------eeCCCCEEEEEEeCCC--CeEEEEECC
Confidence 4799999999999999954321 1223333221 123322221 2689999999999986 689998754
|
| >d2ccwa1 b.6.1.1 (A:1-129) Azurin {Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]
Probab=96.10 E-value=0.011 Score=46.85 Aligned_cols=95 Identities=15% Similarity=0.158 Sum_probs=64.2
Q ss_pred EEc-cCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcc----c--cccCCCCCC----CccceEEeCC
Q 012467 331 YML-GLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKE----D--EKKFNLKNP----PLKNTAVIFP 399 (463)
Q Consensus 331 ~~~-~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~----~--~~~~n~~~p----~~rDTv~v~~ 399 (463)
+.+ +.|+.|+++|.|.+.+ .|-+= +|.|-+...+. .... . ...-+...| ..--|..|.|
T Consensus 20 i~V~k~G~~V~l~~~N~g~l------~h~~m--~hn~vi~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~via~t~~l~p 89 (129)
T d2ccwa1 20 IVVDKSCKQFTMHLKHVGKM------AKVAM--GHNLVLTKDAD--KQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGG 89 (129)
T ss_dssp EEECTTCSEEEEEEEECSCC------CHHHH--CBCCEEEEGGG--HHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCT
T ss_pred EEEecCCCEEEEEEEcCCcC------chhee--eccccccCccc--HHHHHHHHHHhhhccccCCCccccccccccccCC
Confidence 787 6899999999999876 55543 34565554321 1100 0 000001111 2234778899
Q ss_pred CcEEEEEEEc---CCceeeeecccchHhHHccceeeeecc
Q 012467 400 YGWTALRFVA---DNPGAWAFHCHIEPHFHIGMGVVLALG 436 (463)
Q Consensus 400 ~g~~~irf~a---dnpG~w~~HCHi~~H~~~GM~~~~~~~ 436 (463)
|+...|.|++ ..||.+-|=|=+--|. .||-+.+.+.
T Consensus 90 get~~i~f~~p~~~~~G~Y~f~Ct~PGH~-~gM~G~l~V~ 128 (129)
T d2ccwa1 90 GESDSVTFDVSKIAAGENYAYFCSFPGHW-AMMKGTLKLG 128 (129)
T ss_dssp TCEEEEEEEGGGSCTTCCEEEECCSTTGG-GTSEEEEEEC
T ss_pred CceEEEEEEecccCCCccEEEEeCCCChh-hCcEEEEEEc
Confidence 9999999998 4799999999999997 8999988653
|
| >d1cuoa_ b.6.1.1 (A:) Azurin {Methylomonas sp. j [TaxId: 32038]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Methylomonas sp. j [TaxId: 32038]
Probab=96.10 E-value=0.0078 Score=47.68 Aligned_cols=94 Identities=16% Similarity=0.206 Sum_probs=64.6
Q ss_pred EEccCC-CEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcc---------ccccCCC-CCCCccceEEeCC
Q 012467 331 YMLGLN-TTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKE---------DEKKFNL-KNPPLKNTAVIFP 399 (463)
Q Consensus 331 ~~~~~g-~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~---------~~~~~n~-~~p~~rDTv~v~~ 399 (463)
+.++.| +.|+++|.|.+.+ +|-+ =+|.+-+...+. .... ....+-. ..-..--|..|.|
T Consensus 20 i~V~aG~e~v~i~~~N~g~l------ph~~--~~Hn~vi~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~via~t~~l~p 89 (129)
T d1cuoa_ 20 ISVPASCAEFTVNFEHKGHM------PKTG--MGHNWVLAKSAD--VGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGG 89 (129)
T ss_dssp EEEETTCSEEEEEEEECSSS------CHHH--HCBCCEEEEGGG--HHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCT
T ss_pred EEEeCCCEEEEEEEEeCCcC------Ccee--EEeeeeeccccc--HHHHHHHHHhhcccccCCCCCchhhhhhccccCc
Confidence 899999 8999999999987 6654 345664443321 1100 0000000 1113344788999
Q ss_pred CcEEEEEEEc---CCceeeeecccchHhHHccceeeeec
Q 012467 400 YGWTALRFVA---DNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 400 ~g~~~irf~a---dnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
|+...|.|++ ..||.+.|=|=+--|. .||-+.+.+
T Consensus 90 Ge~~~i~f~~p~~~~~G~Y~f~Ct~PGH~-~gM~G~l~V 127 (129)
T d1cuoa_ 90 GEKTSVKFKVSALSKDEAYTYFCSYPGHF-SMMRGTLKL 127 (129)
T ss_dssp TCEEEEEEEGGGCCTTSCEEEECCSTTCT-TTSEEEEEE
T ss_pred cccceEEEEccccCCCceEEEEeCCCCcc-cCcEEEEEE
Confidence 9999999997 4699999999999997 899988865
|
| >d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=96.07 E-value=0.011 Score=50.25 Aligned_cols=73 Identities=16% Similarity=0.335 Sum_probs=57.5
Q ss_pred eEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCccc----ceeeEeeEEecCC-ceEEEEEecCCCCCCceEE
Q 012467 116 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYV----QPFEVDDMDIYSG-ESYSVLLTTNQDPSYNYWI 190 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v----~P~~~~~l~i~~G-eR~dvlV~~~~~~~g~y~i 190 (463)
..+.+..++.+++++.|.. .+.|+++||+|+|++.+|... .|..-|++.|.+| +++.+.+.++. +|.|.+
T Consensus 72 ~~~~~~~~~~~~i~~~~~~---~HP~HlHG~~F~Vl~~~~~~~~~~~~~~~rDTv~v~~~g~~~~irf~adn--pG~w~~ 146 (190)
T d1v10a3 72 AVISLPANQVIEISIPGGG---NHPFHLHGHNFDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTDN--PGPWFL 146 (190)
T ss_dssp TEEEECTTCEEEEEEECCB---SCEEEESSCCEEEEECTTCSCCCCSSCCEESEEECCBSSCEEEEEEECCS--CEEEEE
T ss_pred eeEEccCccEEEEEeccCc---cccccccCceEEEEEcCCCcccccccCcccCEEEeCCCeEEEEEEEEcCC--CeeEEE
Confidence 3688889999999988865 367999999999999998865 4667899999875 57666677765 688766
Q ss_pred EEE
Q 012467 191 SAG 193 (463)
Q Consensus 191 r~~ 193 (463)
.=.
T Consensus 147 HCH 149 (190)
T d1v10a3 147 HCH 149 (190)
T ss_dssp EES
T ss_pred ecC
Confidence 543
|
| >d1jzga_ b.6.1.1 (A:) Azurin {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.01 E-value=0.011 Score=46.58 Aligned_cols=94 Identities=14% Similarity=0.114 Sum_probs=65.3
Q ss_pred EEc-cCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcc-------cc-ccCC--CCCCCccceEEeCC
Q 012467 331 YML-GLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKE-------DE-KKFN--LKNPPLKNTAVIFP 399 (463)
Q Consensus 331 ~~~-~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~-------~~-~~~n--~~~p~~rDTv~v~~ 399 (463)
+.+ +.|+.|+++|.|.+.+ .|-+=+| ..-++..++ .... .. ..+- -..-...-|..|.|
T Consensus 20 i~V~k~Ge~v~l~~~N~g~~------pH~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~vi~~t~~l~p 89 (128)
T d1jzga_ 20 ITVDKSCKQFTVNLSHPGNL------PKNVMGH--NWVLSTAAD--MQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGS 89 (128)
T ss_dssp EEECTTCSEEEEEEECCSSS------CHHHHCB--CCEEEEGGG--HHHHHHHHHTTCGGGTTSCTTCTTCCEECCCBCT
T ss_pred EEEecCCCEEEEEEEeCCcc------chheeec--Ccccccchh--HHHHHHHHHhhhhccccCCCCccchhhcccccCC
Confidence 888 5899999999999988 7886554 343443221 0000 00 0000 01123456788999
Q ss_pred CcEEEEEEEc---CCceeeeecccchHhHHccceeeeec
Q 012467 400 YGWTALRFVA---DNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 400 ~g~~~irf~a---dnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
|+...|.|++ +.||.+.|=|=+--|. .||-+.+.+
T Consensus 90 Ges~~i~f~~p~~~~~G~Y~f~Ct~PGH~-~gM~G~l~V 127 (128)
T d1jzga_ 90 GEKDSVTFDVSKLKEGEQYMFFCTFPGHS-ALMKGTLTL 127 (128)
T ss_dssp TCEEEEEEEGGGCCTTCCEEEECCSTTGG-GTSEEEEEE
T ss_pred CceEEEEEEeeccCCCceEEEEECCCCcc-cccEEEEEE
Confidence 9999999997 4799999999999999 899988864
|
| >d1kdja_ b.6.1.1 (A:) Plastocyanin {Fern (Adiantum capillus-veneris) [TaxId: 13818]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Fern (Adiantum capillus-veneris) [TaxId: 13818]
Probab=95.92 E-value=0.00093 Score=50.89 Aligned_cols=30 Identities=23% Similarity=0.492 Sum_probs=24.9
Q ss_pred EEEEEcCCceeeeecccchHhHHccceeeeec
Q 012467 404 ALRFVADNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 404 ~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
.+.+.++.||.|.|+|.. |..+||.+.|.+
T Consensus 72 ~~~~~f~~~G~y~Y~C~~--H~~~GM~G~I~V 101 (102)
T d1kdja_ 72 SFKAKVSTPGTYTFYCTP--HKSANMKGTLTV 101 (102)
T ss_dssp EEEECCCSCEEEEEECST--TGGGTCEEEEEE
T ss_pred EEEEeeCCCceEEEEecC--CcccCCeEEEEE
Confidence 455566889999999985 999999988864
|
| >d2ov0a1 b.6.1.1 (A:1-105) Amicyanin {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Amicyanin species: Paracoccus denitrificans [TaxId: 266]
Probab=95.73 E-value=0.0088 Score=45.51 Aligned_cols=71 Identities=18% Similarity=0.202 Sum_probs=44.9
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.+.++.|++|.|+ |.+.. .|.++..... .+. ...+.-.+.+|+.. ++.+
T Consensus 34 ~i~V~~GdtV~f~--N~d~~------~H~v~~~~~~-------~~~--------------~~~~~~~~~~g~~~--~~tf 82 (105)
T d2ov0a1 34 ELHVKVGDTVTWI--NREAM------PHNVHFVAGV-------LGE--------------AALKGPMMKKEQAY--SLTF 82 (105)
T ss_dssp EEEECTTCEEEEE--ECSSS------CBCCEECTTT-------SSS--------------SCEECCCBCTTEEE--EEEE
T ss_pred EEEECCCCEEEEE--ECCCC------ceeEEEeccc-------CCc--------------ccccccccCCCceE--EEEe
Confidence 4899999999984 66555 7875533211 000 11222334456654 4555
Q ss_pred CCceeeeecccchHhHHccceeeeec
Q 012467 410 DNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 410 dnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
+.||.+.|+|-+ | .||.+.+.+
T Consensus 83 ~~pG~y~y~C~~--H--~~M~G~I~V 104 (105)
T d2ov0a1 83 TEAGTYDYHCTP--H--PFMRGKVVV 104 (105)
T ss_dssp CSCEEEEEECSS--C--TTCEEEEEE
T ss_pred cCCeEEEEEecC--C--CCCEEEEEE
Confidence 899999999976 6 589887754
|
| >d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=95.68 E-value=0.008 Score=49.82 Aligned_cols=78 Identities=9% Similarity=0.017 Sum_probs=56.5
Q ss_pred EEccCCCEEEEEEEeCCCCCCCCCCCCCeee-cCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 331 YMLGLNTTVDVILQNANAIRPNLSEIHPWHL-HGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 331 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~Hl-HG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
+.++ |.+++|+|.|.+... ..-+++ +||+|+||+. +|.+- ..|...|++.+.||+.+.|-+++
T Consensus 54 ~~~~-~~~~RlR~iNa~~~~-----~~~~~~~~g~~~~via~-DG~~~---------~~P~~~~~l~l~pgeR~dvlv~~ 117 (165)
T d1kv7a2 54 HAAP-RGWLRLRLLNGCNAR-----SLNFATSDNRPLYVIAS-DGGLL---------PEPVKVSELPVLMGERFEVLVEV 117 (165)
T ss_dssp EEEE-EEEEEEEEEECCSSC-----CEEEEETTCCCEEEEEE-TTEEE---------EEEEEESCEEECTTCEEEEEEEE
T ss_pred Eecc-CcEEEEEEEEcccCc-----eeeEEecCCCeEEEEEe-CCccc---------cCceEeCeEEECCCCEEEEEEEC
Confidence 4444 678999999987541 345554 8999999998 44331 23567799999999999998887
Q ss_pred CC--ceeeeecccchHh
Q 012467 410 DN--PGAWAFHCHIEPH 424 (463)
Q Consensus 410 dn--pG~w~~HCHi~~H 424 (463)
.. .+.|+..++-..+
T Consensus 118 ~~~~~~~~~~l~~~~~~ 134 (165)
T d1kv7a2 118 NDNKPFDLVTLPVSQMG 134 (165)
T ss_dssp CTTCCEEEEECCCSSTT
T ss_pred CCCCcEEEEEEecCCCC
Confidence 65 5677776665543
|
| >d2cj3a1 b.6.1.1 (A:1-105) Plastocyanin {Anabaena variabilis [TaxId: 1172]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Anabaena variabilis [TaxId: 1172]
Probab=95.66 E-value=0.0038 Score=47.57 Aligned_cols=42 Identities=24% Similarity=0.347 Sum_probs=34.7
Q ss_pred cceEEeCCCcEEEEEEEc-CCceeeeecccchHhHHccceeeeec
Q 012467 392 KNTAVIFPYGWTALRFVA-DNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 392 rDTv~v~~~g~~~irf~a-dnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
.++....+++...+.|.+ +.||.+.|+|-. |..+||.+.|.+
T Consensus 61 ~~~~~~~~~~~~~~~f~~~~~~G~y~y~C~~--H~~~GM~G~I~V 103 (105)
T d2cj3a1 61 HKQLLMSPGQSTSTTFPADAPAGEYTFYCEP--HRGAGMVGKITV 103 (105)
T ss_dssp EEEEECSTTCEEEEECCTTCCSEEEEEECTT--TGGGTCEEEEEE
T ss_pred ccccccCCCcceEEEEEeccCCceEEEEeCC--CcCCCcEEEEEE
Confidence 466677788888899875 579999999964 999999988864
|
| >d1nwpa_ b.6.1.1 (A:) Azurin {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Pseudomonas putida [TaxId: 303]
Probab=95.58 E-value=0.028 Score=44.18 Aligned_cols=94 Identities=15% Similarity=0.158 Sum_probs=66.8
Q ss_pred EEcc-CCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcc--------ccccCCC--CCCCccceEEeCC
Q 012467 331 YMLG-LNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKE--------DEKKFNL--KNPPLKNTAVIFP 399 (463)
Q Consensus 331 ~~~~-~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~--------~~~~~n~--~~p~~rDTv~v~~ 399 (463)
+.+. .|+.|+++|.|.+.+ .|.+=+| .+-++..+. .... ....+-. ..+...-|..|.|
T Consensus 20 i~V~~~ge~v~i~~~N~g~~------pH~~~~h--n~vi~~~~~--~~~~~~~~~~~~~~~~~~p~~~~~vla~t~~l~p 89 (128)
T d1nwpa_ 20 IAIDKSCKTFTVELTHSGSL------PKNVMGH--NLVISKEAD--MQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGA 89 (128)
T ss_dssp EEECTTCSEEEEEEEECSSC------CHHHHCB--CCEEEEGGG--HHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCT
T ss_pred EEEecCCcEEEEEEEeCCcc------ccceeee--cccccccch--hHHHHHHHHhhhccccCCCCCchhheeecccccC
Confidence 8884 699999999999988 8887544 554554321 1100 0011111 1234556888999
Q ss_pred CcEEEEEEEc---CCceeeeecccchHhHHccceeeeec
Q 012467 400 YGWTALRFVA---DNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 400 ~g~~~irf~a---dnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
|+...|.|++ +.||.+.|=|=+--|. .||-+.+.+
T Consensus 90 Ges~~i~f~~p~~~~~G~Y~f~Ct~PGH~-~~M~G~l~V 127 (128)
T d1nwpa_ 90 GEKDSVTFDVSKLAAGEKYGFFCSFPGHI-SMMKGTVTL 127 (128)
T ss_dssp TCEEEEEEEGGGSCTTSCEEEECCSTTCG-GGSEEEEEE
T ss_pred CCceEEEEEecccCCCceEEEEECCCCcc-cCceEEEEE
Confidence 9999999998 4799999999999998 899988864
|
| >d1bypa_ b.6.1.1 (A:) Plastocyanin {White campion (Silene pratensis) [TaxId: 52853]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: White campion (Silene pratensis) [TaxId: 52853]
Probab=95.51 E-value=0.007 Score=45.45 Aligned_cols=36 Identities=22% Similarity=0.339 Sum_probs=27.2
Q ss_pred EeCCCcEEEEEEEcCCceeeeecccchHhHHccceeeeec
Q 012467 396 VIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 396 ~v~~~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
...++.. +.++++.||.+.|+|- .|...||.+.|.+
T Consensus 63 ~~~~~~~--~~~tf~~~G~y~y~C~--~H~~~GM~G~I~V 98 (99)
T d1bypa_ 63 LNAPGEE--YSVTLTEKGTYKFYCA--PHAGAGMVGKVTV 98 (99)
T ss_dssp BCSTTCE--EEEEECSCEEEEEECG--GGTTTTCEEEEEE
T ss_pred ccCCCce--EEEEecCCceEEEEEC--cCCCCCCEEEEEE
Confidence 3344554 4555679999999996 4999999998865
|
| >d1fwxa1 b.6.1.4 (A:452-581) Nitrous oxide reductase, C-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Nitrous oxide reductase, C-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=95.48 E-value=0.03 Score=44.31 Aligned_cols=78 Identities=12% Similarity=0.089 Sum_probs=54.7
Q ss_pred CceEEEecCCCeEEEEEEecCcc--eEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEE
Q 012467 114 APQILHVQPNKTYRLRIASTTAL--ASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWIS 191 (463)
Q Consensus 114 ~~~~~~v~~g~~~RlRliNa~~~--~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir 191 (463)
.++.|+|+.|++++|+|.|.... ..+.|.|.+..+. +.+.||+...+-+++++ +|.|++.
T Consensus 50 ~p~~i~V~~Gd~V~~~ltN~d~~~~v~H~~~i~~~~~~----------------~~~~PG~~~~~~F~a~~--~G~y~~~ 111 (132)
T d1fwxa1 50 SIESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGVA----------------MEIGPQMTSSVTFVAAN--PGVYWYY 111 (132)
T ss_dssp SCSEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE----------------EEECTTCEEEEEEECCS--CEEEEEE
T ss_pred cCCEEEEcCCCEEEEEEEcCCCCccceEeechhhhccc----------------cccCCCEEEEEEEeCCC--CeEEEEE
Confidence 44689999999999999997743 3566777666432 35789999999999986 7999986
Q ss_pred EEecCCCCC-CCCeEEEEEeC
Q 012467 192 AGVRGRKPA-TPPALTLLNYH 211 (463)
Q Consensus 192 ~~~~~~~~~-~~~~~a~l~y~ 211 (463)
=.. .|.. -....+.|.++
T Consensus 112 C~~--~cg~~H~~M~G~iiVe 130 (132)
T d1fwxa1 112 CQW--FCHALHMEMRGRMLVE 130 (132)
T ss_dssp CCS--CCSTTCTTCEEEEEEE
T ss_pred Ccc--ccCcchhcCEEEEEEE
Confidence 321 2321 13455666554
|
| >d1adwa_ b.6.1.1 (A:) Pseudoazurin {Thiosphaera pantotropha [TaxId: 82367]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Thiosphaera pantotropha [TaxId: 82367]
Probab=95.27 E-value=0.0063 Score=47.86 Aligned_cols=31 Identities=26% Similarity=0.613 Sum_probs=26.0
Q ss_pred EEEEcCCceeeeecccchHhHHccceeeeeccc
Q 012467 405 LRFVADNPGAWAFHCHIEPHFHIGMGVVLALGV 437 (463)
Q Consensus 405 irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~ 437 (463)
+.++++.+|.|-|+|=+ |..+||.+.+.++.
T Consensus 64 ~~~tF~~~G~Y~Y~C~p--H~~~GM~G~I~Vg~ 94 (123)
T d1adwa_ 64 YTLTVTEPGLYGVKCTP--HFGMGMVGLVQVGD 94 (123)
T ss_dssp EEEEECSCEEEEEECGG--GGGGTCEEEEEESS
T ss_pred eEEeccCCCeEEEEEcc--CCCCCCEEEEEECC
Confidence 34556889999999964 99999999998765
|
| >d1bqka_ b.6.1.1 (A:) Pseudoazurin {Achromobacter cycloclastes [TaxId: 223]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Achromobacter cycloclastes [TaxId: 223]
Probab=95.18 E-value=0.0077 Score=47.36 Aligned_cols=31 Identities=29% Similarity=0.705 Sum_probs=26.8
Q ss_pred EEEEcCCceeeeecccchHhHHccceeeeeccc
Q 012467 405 LRFVADNPGAWAFHCHIEPHFHIGMGVVLALGV 437 (463)
Q Consensus 405 irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~ 437 (463)
+.++++.||.+.|+|. .|...||.+.+.++.
T Consensus 64 ~s~Tf~~~G~Y~Y~C~--pH~~~GM~G~IvVgd 94 (124)
T d1bqka_ 64 YKVTFTAPGVYGVKCT--PHYGMGMVGVVQVGD 94 (124)
T ss_dssp EEEECCSCEEEEEECT--TTGGGTCEEEEEESS
T ss_pred EEEecCCCceEEEEec--cCcCCCCEEEEEECC
Confidence 4567789999999996 599999999998875
|
| >d1iuza_ b.6.1.1 (A:) Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 3120]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Ulva pertusa, a sea lettuce [TaxId: 3120]
Probab=95.12 E-value=0.013 Score=43.84 Aligned_cols=35 Identities=20% Similarity=0.331 Sum_probs=27.1
Q ss_pred eCCCcEEEEEEEcCCceeeeecccchHhHHccceeeeec
Q 012467 397 IFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 397 v~~~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
..++.+ +.+.++.||.+.|+|- .|..+||.+.|.+
T Consensus 63 ~~~~~~--~~~~f~~~G~y~y~C~--~H~~~GM~G~I~V 97 (98)
T d1iuza_ 63 NSKGET--VVRKLSTPGVYGVYCE--PHAGAGMKMTITV 97 (98)
T ss_dssp CSTTCE--EEEECCSCEEEEEECT--TTGGGTCEEEEEE
T ss_pred cCCCcE--EEEecCCCceEEEEeC--CCccCCCeEEEEE
Confidence 344544 4566789999999996 4999999988864
|
| >d1pmya_ b.6.1.1 (A:) Pseudoazurin {Methylobacterium extorquens, strain am1 [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Methylobacterium extorquens, strain am1 [TaxId: 408]
Probab=94.96 E-value=0.0072 Score=47.48 Aligned_cols=34 Identities=15% Similarity=0.105 Sum_probs=28.1
Q ss_pred cccccccceeEEEeccchhhhhcceeeEEEEeCCCC
Q 012467 2 LDVWQVQAGTYFYHGHLGMQRSAGLYGSLIVDVADG 37 (463)
Q Consensus 2 ~~~~~~~~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~ 37 (463)
|++....+|+|.|+|.. +...||.|.|||.++.+
T Consensus 64 ~~~tF~~~G~Y~Y~C~p--H~~~GM~G~I~Vgd~~~ 97 (123)
T d1pmya_ 64 AVVKFDKEGVYGFKCAP--HYMMGMVALVVVGDKRD 97 (123)
T ss_dssp EEEECCSCEEEEEECST--TTTTTCEEEEEESSCCT
T ss_pred cccccCCCceEEEEecc--CCCCCCEEEEEECCCCC
Confidence 45666789999999964 88899999999987643
|
| >d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=94.86 E-value=0.016 Score=48.30 Aligned_cols=71 Identities=17% Similarity=0.177 Sum_probs=53.0
Q ss_pred EEccCCCEEEEEEEeCCCCCCCCCCCCCeee-cCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 331 YMLGLNTTVDVILQNANAIRPNLSEIHPWHL-HGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 331 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~Hl-HG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
+.++ +..++|.|.|.+... .+-|++ +|++|+||+. +|.+- ..|...|++.|.+|+.+.|-+.+
T Consensus 61 ~~v~-~~~~RlRliNa~~~~-----~~~l~~~~g~~~~vIa~-DG~~l---------~~P~~~~~l~l~pgeR~dvlv~~ 124 (174)
T d1gska2 61 LEVE-PRKYRFRVINASNTR-----TYNLSLDNGGDFIQIGS-DGGLL---------PRSVKLNSFSLAPAERYDIIIDF 124 (174)
T ss_dssp EECC-SSEEEEEEEECCSSC-----CEEEEETTCCCEEEEEE-TTEEE---------EEEEEESEEEECTTCEEEEEEEC
T ss_pred EEec-CceEEEEEEecccCc-----eeeEeecCCCcEEEEEE-CCCcc---------cCceEeCEEEEcCCcEEEEEEEC
Confidence 4454 567999999987652 678888 7999999998 44331 23567899999999999999887
Q ss_pred CC-ce-eeee
Q 012467 410 DN-PG-AWAF 417 (463)
Q Consensus 410 dn-pG-~w~~ 417 (463)
.. +| .|.+
T Consensus 125 ~~~~g~~~~l 134 (174)
T d1gska2 125 TAYEGESIIL 134 (174)
T ss_dssp GGGTTCEEEE
T ss_pred CCCCCceEEE
Confidence 64 44 4544
|
| >d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Auracyanin species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=94.54 E-value=0.03 Score=44.68 Aligned_cols=75 Identities=20% Similarity=0.145 Sum_probs=47.2
Q ss_pred ceEEEecCCCeEEEEEEecCcce-EEEEEEeCcee------EEEEeCCccc----ce----eeEeeEEecCCceEEEEEe
Q 012467 115 PQILHVQPNKTYRLRIASTTALA-SLNLAVKNHKM------VVVEADGNYV----QP----FEVDDMDIYSGESYSVLLT 179 (463)
Q Consensus 115 ~~~~~v~~g~~~RlRliNa~~~~-~~~~~i~~h~~------~via~DG~~v----~P----~~~~~l~i~~GeR~dvlV~ 179 (463)
+..|+|++|+++||.|.|.+... .+.|.+....- ...+.+|... .| ....+..+.+||++.+.++
T Consensus 31 p~~i~v~aG~~V~~~~~N~~~~~~~Hn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~~t~~~~pg~s~~i~f~ 110 (139)
T d1qhqa_ 31 QTSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSVTFR 110 (139)
T ss_dssp CSEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEEEEE
T ss_pred CCeEEECCCCEEEEEEeCCcccceeEEEeecccchhhHHHHHHhhhccchhccccCCCcccccccccccCCcceEEEEEe
Confidence 34799999999999999988542 23332221100 0000112111 12 2346678999999999999
Q ss_pred cCCCCCCceEEE
Q 012467 180 TNQDPSYNYWIS 191 (463)
Q Consensus 180 ~~~~~~g~y~ir 191 (463)
+++ +|.|++.
T Consensus 111 ~~~--~G~y~f~ 120 (139)
T d1qhqa_ 111 TPA--PGTYLYI 120 (139)
T ss_dssp CCS--SEEEEEE
T ss_pred cCC--CeEEEEE
Confidence 985 6899875
|
| >d1adwa_ b.6.1.1 (A:) Pseudoazurin {Thiosphaera pantotropha [TaxId: 82367]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Thiosphaera pantotropha [TaxId: 82367]
Probab=94.54 E-value=0.011 Score=46.28 Aligned_cols=34 Identities=18% Similarity=0.133 Sum_probs=27.5
Q ss_pred cccccccceeEEEeccchhhhhcceeeEEEEeCCCC
Q 012467 2 LDVWQVQAGTYFYHGHLGMQRSAGLYGSLIVDVADG 37 (463)
Q Consensus 2 ~~~~~~~~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~ 37 (463)
|++....+|+|+|+|= .+...||.|.|||.++..
T Consensus 64 ~~~tF~~~G~Y~Y~C~--pH~~~GM~G~I~Vg~~~~ 97 (123)
T d1adwa_ 64 YTLTVTEPGLYGVKCT--PHFGMGMVGLVQVGDAPE 97 (123)
T ss_dssp EEEEECSCEEEEEECG--GGGGGTCEEEEEESSSCT
T ss_pred eEEeccCCCeEEEEEc--cCCCCCCEEEEEECCCCC
Confidence 4566678999999994 477889999999976543
|
| >d1cuoa_ b.6.1.1 (A:) Azurin {Methylomonas sp. j [TaxId: 32038]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Methylomonas sp. j [TaxId: 32038]
Probab=94.52 E-value=0.028 Score=44.26 Aligned_cols=73 Identities=15% Similarity=0.193 Sum_probs=48.5
Q ss_pred ceEEEecCC-CeEEEEEEecCcceEEEEEEeCceeEEEEeCCc----------------ccce----eeEeeEEecCCce
Q 012467 115 PQILHVQPN-KTYRLRIASTTALASLNLAVKNHKMVVVEADGN----------------YVQP----FEVDDMDIYSGES 173 (463)
Q Consensus 115 ~~~~~v~~g-~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~----------------~v~P----~~~~~l~i~~GeR 173 (463)
+..|+|++| +++||.|.|.+..-. .+-+|++ ||..++. +..| ....+..|.|||.
T Consensus 17 ~~~i~V~aG~e~v~i~~~N~g~lph---~~~~Hn~-vi~~~~~~~~~~~~~~~~~~~~~~~~p~~~~via~t~~l~pGe~ 92 (129)
T d1cuoa_ 17 TRSISVPASCAEFTVNFEHKGHMPK---TGMGHNW-VLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEK 92 (129)
T ss_dssp CSEEEEETTCSEEEEEEEECSSSCH---HHHCBCC-EEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCE
T ss_pred ccEEEEeCCCEEEEEEEEeCCcCCc---eeEEeee-eecccccHHHHHHHHHhhcccccCCCCCchhhhhhccccCcccc
Confidence 348999999 899999999996420 0123444 2223222 2222 2245689999999
Q ss_pred EEEEEecCC-CCCCceEEE
Q 012467 174 YSVLLTTNQ-DPSYNYWIS 191 (463)
Q Consensus 174 ~dvlV~~~~-~~~g~y~ir 191 (463)
.++.+++++ .++|+|...
T Consensus 93 ~~i~f~~p~~~~~G~Y~f~ 111 (129)
T d1cuoa_ 93 TSVKFKVSALSKDEAYTYF 111 (129)
T ss_dssp EEEEEEGGGCCTTSCEEEE
T ss_pred ceEEEEccccCCCceEEEE
Confidence 999999875 247999764
|
| >d1bxua_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]
Probab=94.25 E-value=0.013 Score=43.25 Aligned_cols=30 Identities=30% Similarity=0.556 Sum_probs=24.2
Q ss_pred cccccccceeEEEeccchhhhhcceeeEEEEe
Q 012467 2 LDVWQVQAGTYFYHGHLGMQRSAGLYGSLIVD 33 (463)
Q Consensus 2 ~~~~~~~~GT~WYHsH~~~q~~~Gl~G~lIV~ 33 (463)
|++....+|+|.|+|-. +...||.|.|+|+
T Consensus 62 ~~~tF~~~G~y~Y~C~~--H~~~gM~G~I~Ve 91 (91)
T d1bxua_ 62 FEATFSEPGTYTYYCEP--HRGAGMVGKIVVQ 91 (91)
T ss_dssp EEEECCSCEEEEEECTT--TGGGTCEEEEEEC
T ss_pred EEEEeccCceEEEEeCC--CCCCCCEEEEEEC
Confidence 34556789999999953 6677999999995
|
| >d1bqka_ b.6.1.1 (A:) Pseudoazurin {Achromobacter cycloclastes [TaxId: 223]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Achromobacter cycloclastes [TaxId: 223]
Probab=94.11 E-value=0.016 Score=45.46 Aligned_cols=33 Identities=21% Similarity=0.175 Sum_probs=26.8
Q ss_pred cccccccceeEEEeccchhhhhcceeeEEEEeCCC
Q 012467 2 LDVWQVQAGTYFYHGHLGMQRSAGLYGSLIVDVAD 36 (463)
Q Consensus 2 ~~~~~~~~GT~WYHsH~~~q~~~Gl~G~lIV~~~~ 36 (463)
|++....+|+|.|+|- .+...||.|.|||.+..
T Consensus 64 ~s~Tf~~~G~Y~Y~C~--pH~~~GM~G~IvVgd~~ 96 (124)
T d1bqka_ 64 YKVTFTAPGVYGVKCT--PHYGMGMVGVVQVGDAP 96 (124)
T ss_dssp EEEECCSCEEEEEECT--TTGGGTCEEEEEESSSC
T ss_pred EEEecCCCceEEEEec--cCcCCCCEEEEEECCCC
Confidence 4566678999999995 47778999999997653
|
| >d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=94.09 E-value=0.14 Score=43.28 Aligned_cols=75 Identities=15% Similarity=0.317 Sum_probs=57.0
Q ss_pred eEEEecCCCeEEEEEEecCcc--eEEEEEEeCceeEEEEeCCccc----ceeeEeeEEe---cCCceEEEEEecCCCCCC
Q 012467 116 QILHVQPNKTYRLRIASTTAL--ASLNLAVKNHKMVVVEADGNYV----QPFEVDDMDI---YSGESYSVLLTTNQDPSY 186 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~--~~~~~~i~~h~~~via~DG~~v----~P~~~~~l~i---~~GeR~dvlV~~~~~~~g 186 (463)
.++.+..++++++.++|.... ..+.|+++||.|+|++.+|... .|...|.+.+ .+|+.+-+.+.++. +|
T Consensus 70 ~v~~~~~~~~~eiv~~~~~~~~~~~HP~HlHG~~F~vv~~~~~~~~~~~~p~~rdt~~~~~~~~g~~~~irf~adn--pG 147 (199)
T d1gyca3 70 SVYPLPAHSTIEITLPATALAPGAPHPFHLHGHAFAVVRSAGSTTYNYNDPIFRDVVSTGTPAAGDNVTIRFQTDN--PG 147 (199)
T ss_dssp SEEEECTTCEEEEEEECCTTSCSCSCEEEETTCCEEEEECTTCCCCCSSSCCEESEEECCCGGGTCEEEEEEECCS--CE
T ss_pred ceEEeccCceeEEEeecccccCCCceeeeecCCcEEEEeecCCCccCccCcccccceeeeccCCCcEEEEEEECCC--Ce
Confidence 367888899999888886543 4589999999999999988653 4555555444 89999988888875 57
Q ss_pred ceEEEE
Q 012467 187 NYWISA 192 (463)
Q Consensus 187 ~y~ir~ 192 (463)
.|-++=
T Consensus 148 ~w~~HC 153 (199)
T d1gyca3 148 PWFLHC 153 (199)
T ss_dssp EEEEEE
T ss_pred eEEEEc
Confidence 665553
|
| >d1paza_ b.6.1.1 (A:) Pseudoazurin {Alcaligenes faecalis, strain s-6 [TaxId: 511]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Alcaligenes faecalis, strain s-6 [TaxId: 511]
Probab=93.59 E-value=0.023 Score=44.23 Aligned_cols=33 Identities=15% Similarity=0.190 Sum_probs=27.0
Q ss_pred cccccccceeEEEeccchhhhhcceeeEEEEeCCC
Q 012467 2 LDVWQVQAGTYFYHGHLGMQRSAGLYGSLIVDVAD 36 (463)
Q Consensus 2 ~~~~~~~~GT~WYHsH~~~q~~~Gl~G~lIV~~~~ 36 (463)
|++....+|+|.|+|- .+...||.|.|+|.+++
T Consensus 64 ~s~tF~~~G~y~Y~Ct--pH~~~GM~G~I~Vg~~~ 96 (120)
T d1paza_ 64 YVLTVTQPGAYLVKCT--PHYAMGMIALIAVGDSP 96 (120)
T ss_dssp EEEECCSCEEEEEECT--TTGGGTCEEEEEESSSC
T ss_pred EEEEecCCCeEEEEEe--eCCCCCCEEEEEECCCC
Confidence 4556678999999995 47778999999998764
|
| >d2ccwa1 b.6.1.1 (A:1-129) Azurin {Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]
Probab=93.53 E-value=0.027 Score=44.36 Aligned_cols=73 Identities=21% Similarity=0.289 Sum_probs=48.1
Q ss_pred eEEEe-cCCCeEEEEEEecCcceEEEEEEeCceeEEEE---------------eCCcccce----eeEeeEEecCCceEE
Q 012467 116 QILHV-QPNKTYRLRIASTTALASLNLAVKNHKMVVVE---------------ADGNYVQP----FEVDDMDIYSGESYS 175 (463)
Q Consensus 116 ~~~~v-~~g~~~RlRliNa~~~~~~~~~i~~h~~~via---------------~DG~~v~P----~~~~~l~i~~GeR~d 175 (463)
..|+| ++|+++||.|.|.+..-. .+-+|++-+.. .++.+..| ....+..|.|||..+
T Consensus 18 ~~i~V~k~G~~V~l~~~N~g~l~h---~~m~hn~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~via~t~~l~pget~~ 94 (129)
T d2ccwa1 18 KEIVVDKSCKQFTMHLKHVGKMAK---VAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESDS 94 (129)
T ss_dssp SEEEECTTCSEEEEEEEECSCCCH---HHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEE
T ss_pred ceEEEecCCCEEEEEEEcCCcCch---heeeccccccCcccHHHHHHHHHHhhhccccCCCccccccccccccCCCceEE
Confidence 47999 799999999999995320 01123333322 12223322 234567899999999
Q ss_pred EEEecCC-CCCCceEEE
Q 012467 176 VLLTTNQ-DPSYNYWIS 191 (463)
Q Consensus 176 vlV~~~~-~~~g~y~ir 191 (463)
+.+++++ .++|+|...
T Consensus 95 i~f~~p~~~~~G~Y~f~ 111 (129)
T d2ccwa1 95 VTFDVSKIAAGENYAYF 111 (129)
T ss_dssp EEEEGGGSCTTCCEEEE
T ss_pred EEEEecccCCCccEEEE
Confidence 9999974 257999874
|
| >d1qnia1 b.6.1.4 (A:451-581) Nitrous oxide reductase, C-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Nitrous oxide reductase, C-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=93.06 E-value=0.21 Score=39.09 Aligned_cols=77 Identities=16% Similarity=0.142 Sum_probs=52.4
Q ss_pred ceEEEecCCCeEEEEEEecCc--ceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEE
Q 012467 115 PQILHVQPNKTYRLRIASTTA--LASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA 192 (463)
Q Consensus 115 ~~~~~v~~g~~~RlRliNa~~--~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~ 192 (463)
+..|+|+.|++++|+|-|... ...+.|.|.+..+ .+.+.||+...+.+++++ +|.|+++=
T Consensus 50 p~~i~V~~Gd~V~~~vtn~~~s~Dv~H~f~ip~~~v----------------~~~~~PG~t~~~~f~~~~--~G~y~~~C 111 (131)
T d1qnia1 50 MTDFKVKEGDEVTVYITNLDMVEDVTHGFCMVNHGV----------------SMEISPQQTASVTFTAGK--PGVYWYYC 111 (131)
T ss_dssp CSEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTE----------------EEEECTTCEEEEEEECCS--SEEEEEEC
T ss_pred cceEEecCCCEEEEEEEccCCCCcceEEEEEeccCc----------------ccccCCCceEEEEEEcCC--CEEEEEEC
Confidence 458999999999999999643 3456677765432 245679999999999986 79999863
Q ss_pred EecCCCCCC-CCeEEEEEeC
Q 012467 193 GVRGRKPAT-PPALTLLNYH 211 (463)
Q Consensus 193 ~~~~~~~~~-~~~~a~l~y~ 211 (463)
. ..|... ..-.+.|.++
T Consensus 112 ~--~~cg~~H~~M~g~i~Ve 129 (131)
T d1qnia1 112 N--WFCHALHMEMVGRMLVE 129 (131)
T ss_dssp C--SCCSTTGGGCEEEEEEE
T ss_pred c--cccCcchhcCeeEEEEE
Confidence 2 123211 2345555554
|
| >d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=92.40 E-value=0.48 Score=40.36 Aligned_cols=73 Identities=11% Similarity=0.177 Sum_probs=54.3
Q ss_pred EEEecCCCeEEEEEEecCc----ceEEEEEEeCceeEEEEeCCcc---------------------cceeeEeeEEecCC
Q 012467 117 ILHVQPNKTYRLRIASTTA----LASLNLAVKNHKMVVVEADGNY---------------------VQPFEVDDMDIYSG 171 (463)
Q Consensus 117 ~~~v~~g~~~RlRliNa~~----~~~~~~~i~~h~~~via~DG~~---------------------v~P~~~~~l~i~~G 171 (463)
.+.+...+.+++.+++... ...+-|+++||+|+||+..+.. ..|...|++.+.+|
T Consensus 62 ~~~~~~~~~~~~~~i~~~~~n~~~~~HP~HlHG~~F~Vlg~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~~rDTv~v~~~ 141 (216)
T d2q9oa3 62 IVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAG 141 (216)
T ss_dssp EEEECCSSCEEEEEEEECTTSSCCCCEEEEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTT
T ss_pred eeeccccccceeEEEEeccCCccccccceeecCceEEEEeecCCCCCcccccccccccccccccccCCCceeceEEeCCC
Confidence 5666666667666665432 2459999999999999986642 23667899999999
Q ss_pred ceEEEEEecCCCCCCceEEE
Q 012467 172 ESYSVLLTTNQDPSYNYWIS 191 (463)
Q Consensus 172 eR~dvlV~~~~~~~g~y~ir 191 (463)
+-..+-+.++. +|.|-+.
T Consensus 142 g~~~ir~~adn--pG~Wl~H 159 (216)
T d2q9oa3 142 GWLLLAFRTDN--PGAWLFH 159 (216)
T ss_dssp SEEEEEEECCS--CEEEEEE
T ss_pred CEEEEEEECCC--CeEEEEE
Confidence 99988888875 5776554
|
| >d1id2a_ b.6.1.1 (A:) Amicyanin {Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Amicyanin species: Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]
Probab=92.14 E-value=0.13 Score=38.59 Aligned_cols=71 Identities=14% Similarity=0.106 Sum_probs=43.0
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.+.++.|++|.| .|.+.. .|.+...... .+.+ .-+.-.+.++.. ..+.+
T Consensus 35 ~i~V~~GdtV~f--~N~d~~------~H~v~~~~~~-----~~~~----------------~f~s~~~~~~~~--~~~tf 83 (106)
T d1id2a_ 35 EVTIKAGETVYW--VNGEVM------PHNVAFKKGI-----VGED----------------AFRGEMMTKDQA--YAITF 83 (106)
T ss_dssp EEEECTTCEEEE--EECSSS------CBCCEECTTT-----SSSS----------------CEECCCBCTTEE--EEEEE
T ss_pred EEEECCCCEEEE--EECCCC------ceeEEecccc-----CCcc----------------cccccccCCCce--EEEec
Confidence 489999999987 466544 5654322110 0001 112223334443 45667
Q ss_pred CCceeeeecccchHhHHccceeeeec
Q 012467 410 DNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 410 dnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
+.||.+.|+|=+ | .||.+.+.+
T Consensus 84 ~~~G~y~y~C~~--H--~~M~G~I~V 105 (106)
T d1id2a_ 84 NEAGSYDYFCTP--H--PFMRGKVIV 105 (106)
T ss_dssp CSCEEEEEECSS--C--TTCEEEEEE
T ss_pred CCCeEEEEEccC--C--CCCEEEEEE
Confidence 899999999976 7 599888754
|
| >d1jzga_ b.6.1.1 (A:) Azurin {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Pseudomonas aeruginosa [TaxId: 287]
Probab=92.07 E-value=0.086 Score=41.27 Aligned_cols=74 Identities=22% Similarity=0.312 Sum_probs=47.0
Q ss_pred ceEEEe-cCCCeEEEEEEecCcceEEEEEEeCceeEEEE---------------eCCccccee----eEeeEEecCCceE
Q 012467 115 PQILHV-QPNKTYRLRIASTTALASLNLAVKNHKMVVVE---------------ADGNYVQPF----EVDDMDIYSGESY 174 (463)
Q Consensus 115 ~~~~~v-~~g~~~RlRliNa~~~~~~~~~i~~h~~~via---------------~DG~~v~P~----~~~~l~i~~GeR~ 174 (463)
+..|+| ++|+++||.|.|.+... +.+- .|+.-+.. .+..+..|. ...+..|.|||..
T Consensus 17 ~~~i~V~k~Ge~v~l~~~N~g~~p-H~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~vi~~t~~l~pGes~ 93 (128)
T d1jzga_ 17 TNAITVDKSCKQFTVNLSHPGNLP-KNVM--GHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKD 93 (128)
T ss_dssp CSEEEECTTCSEEEEEEECCSSSC-HHHH--CBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCCEECCCBCTTCEE
T ss_pred cceEEEecCCCEEEEEEEeCCccc-hhee--ecCcccccchhHHHHHHHHHhhhhccccCCCCccchhhcccccCCCceE
Confidence 347999 58999999999999642 1111 12221111 112223232 2456789999999
Q ss_pred EEEEecCC-CCCCceEEE
Q 012467 175 SVLLTTNQ-DPSYNYWIS 191 (463)
Q Consensus 175 dvlV~~~~-~~~g~y~ir 191 (463)
++.+++++ .++|+|...
T Consensus 94 ~i~f~~p~~~~~G~Y~f~ 111 (128)
T d1jzga_ 94 SVTFDVSKLKEGEQYMFF 111 (128)
T ss_dssp EEEEEGGGCCTTCCEEEE
T ss_pred EEEEEeeccCCCceEEEE
Confidence 99999874 257998653
|
| >d1nwpa_ b.6.1.1 (A:) Azurin {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Pseudomonas putida [TaxId: 303]
Probab=90.78 E-value=0.16 Score=39.59 Aligned_cols=74 Identities=19% Similarity=0.289 Sum_probs=47.8
Q ss_pred ceEEEec-CCCeEEEEEEecCcceEEEEEEeCceeEEEEeC---------------Cccc----ceeeEeeEEecCCceE
Q 012467 115 PQILHVQ-PNKTYRLRIASTTALASLNLAVKNHKMVVVEAD---------------GNYV----QPFEVDDMDIYSGESY 174 (463)
Q Consensus 115 ~~~~~v~-~g~~~RlRliNa~~~~~~~~~i~~h~~~via~D---------------G~~v----~P~~~~~l~i~~GeR~ 174 (463)
+.+|+|+ +|+++||.|.|.+... +. +-.|++-+...+ ..++ .+....+..|.|||..
T Consensus 17 ~~~i~V~~~ge~v~i~~~N~g~~p-H~--~~~hn~vi~~~~~~~~~~~~~~~~~~~~~~~p~~~~~vla~t~~l~pGes~ 93 (128)
T d1nwpa_ 17 TKDIAIDKSCKTFTVELTHSGSLP-KN--VMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKD 93 (128)
T ss_dssp CSEEEECTTCSEEEEEEEECSSCC-HH--HHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred CCeEEEecCCcEEEEEEEeCCccc-cc--eeeecccccccchhHHHHHHHHhhhccccCCCCCchhheeecccccCCCce
Confidence 3479995 6999999999999642 11 123333332221 1122 1244567789999999
Q ss_pred EEEEecCC-CCCCceEEE
Q 012467 175 SVLLTTNQ-DPSYNYWIS 191 (463)
Q Consensus 175 dvlV~~~~-~~~g~y~ir 191 (463)
++.+++++ .++|+|...
T Consensus 94 ~i~f~~p~~~~~G~Y~f~ 111 (128)
T d1nwpa_ 94 SVTFDVSKLAAGEKYGFF 111 (128)
T ss_dssp EEEEEGGGSCTTSCEEEE
T ss_pred EEEEEecccCCCceEEEE
Confidence 99999974 257998653
|
| >d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=90.39 E-value=0.084 Score=44.03 Aligned_cols=78 Identities=10% Similarity=0.020 Sum_probs=48.8
Q ss_pred eEEEecCCCeEEEEEEecCc---------------------ceEEEEEEeCceeEEEEeCCcccceeeEe-eEEecCCce
Q 012467 116 QILHVQPNKTYRLRIASTTA---------------------LASLNLAVKNHKMVVVEADGNYVQPFEVD-DMDIYSGES 173 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~---------------------~~~~~~~i~~h~~~via~DG~~v~P~~~~-~l~i~~GeR 173 (463)
|+|.+++|+++++|+.|-=. .....++..|-... -+.||.......-. .-....|++
T Consensus 57 PtI~v~~Gd~v~v~~~N~Lp~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~-~~~DG~~~~~~~~~~~~~~~~~~~ 135 (181)
T d1gska1 57 PTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVTP-DDSDGYPEAWFSKDFEQTGPYFKR 135 (181)
T ss_dssp CBEEEETTCCEEEEEEECCCSSCSSCCCTTCC-------CCSCCBCEEEETCCCC-GGGSCCTTSCBCGGGSSBCTTCCC
T ss_pred CeEEEeCCeEEEEEEEeCCCcCccccccccccccccccccCCCcceeeeeccccC-CccCCCcccccccCcccCCCCCcc
Confidence 58999999999999999421 11233455443211 14578754322211 113456788
Q ss_pred EEEEEecCCCCCCceEEEEEec
Q 012467 174 YSVLLTTNQDPSYNYWISAGVR 195 (463)
Q Consensus 174 ~dvlV~~~~~~~g~y~ir~~~~ 195 (463)
++..+.+++ .+|.||......
T Consensus 136 ~~y~~~~~~-~~Gt~WYH~H~~ 156 (181)
T d1gska1 136 EVYHYPNQQ-RGAILWYHDHAM 156 (181)
T ss_dssp SEEEECCCS-CSEEEEEEECCT
T ss_pred eeEEeecCC-CCEEEEeCCCCC
Confidence 888888887 578999987654
|
| >d2cuaa_ b.6.1.2 (A:) Cytochrome c oxidase {Thermus thermophilus, ba3 type [TaxId: 274]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Periplasmic domain of cytochrome c oxidase subunit II domain: Cytochrome c oxidase species: Thermus thermophilus, ba3 type [TaxId: 274]
Probab=89.78 E-value=0.55 Score=36.05 Aligned_cols=56 Identities=18% Similarity=0.284 Sum_probs=42.1
Q ss_pred EEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEE
Q 012467 117 ILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA 192 (463)
Q Consensus 117 ~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~ 192 (463)
.|.|+.|++++|+|-|.... +.|.|.+..+. +.+-||+.-.+.+++++ +|.|.++=
T Consensus 48 ~l~vp~G~~V~~~lts~DV~--H~f~ip~~~v~----------------~d~~PG~~~~~~~~~~~--~G~y~~~C 103 (122)
T d2cuaa_ 48 PIEVPQGAEIVFKITSPDVI--HGFHVEGTNIN----------------VEVLPGEVSTVRYTFKR--PGEYRIIC 103 (122)
T ss_dssp SEEEETTSEEEEEEEBSSSC--EEEEETTSSCE----------------EEECBTBCEEEEEECCS--CEEEEEEC
T ss_pred EEEEeCCCEEEEEEEcCCcc--ceeEecCCCee----------------EEEecCceEEEEEEecc--ceeEEEEe
Confidence 68999999999999887633 55566554432 23568999889998886 68998764
|
| >d1cyxa_ b.6.1.2 (A:) Quinol oxidase (CyoA) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Periplasmic domain of cytochrome c oxidase subunit II domain: Quinol oxidase (CyoA) species: Escherichia coli [TaxId: 562]
Probab=87.18 E-value=0.52 Score=37.96 Aligned_cols=62 Identities=19% Similarity=0.234 Sum_probs=46.6
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
-+.++.|+.|++.|.+.+.+ |. |+|-..+ =-..+.||-...+.|++
T Consensus 28 ~l~lP~g~pV~~~ltS~DVi-------Hs-------F~vP~l~--------------------~k~daiPG~~~~~~~~~ 73 (158)
T d1cyxa_ 28 EIAFPANTPVYFKVTSNSVM-------HS-------FFIPRLG--------------------SQIYAMAGMQTRLHLIA 73 (158)
T ss_dssp EEEEETTSCEEEEEEESSSC-------EE-------EEEGGGT--------------------EEEEECTTCCEEEEECC
T ss_pred eEEeeCCCeEEEEEEcCCcc-------hh-------hhhhhcc--------------------eeeccCCCceeeeeeee
Confidence 38899999999999988754 44 5553321 12345578899999999
Q ss_pred CCceeeeecccchHhH
Q 012467 410 DNPGAWAFHCHIEPHF 425 (463)
Q Consensus 410 dnpG~w~~HCHi~~H~ 425 (463)
+.||.|...|...--.
T Consensus 74 ~~~G~y~g~Cae~CG~ 89 (158)
T d1cyxa_ 74 NEPGTYDGICAEICGP 89 (158)
T ss_dssp SSSEEEEEEECSCCST
T ss_pred cCCCcEEEEchhhcCc
Confidence 9999999999965433
|
| >d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=83.29 E-value=0.33 Score=41.11 Aligned_cols=77 Identities=12% Similarity=0.175 Sum_probs=50.9
Q ss_pred CceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccce--------eeEeeEEecCCceEEEEEecCCCCC
Q 012467 114 APQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQP--------FEVDDMDIYSGESYSVLLTTNQDPS 185 (463)
Q Consensus 114 ~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P--------~~~~~l~i~~GeR~dvlV~~~~~~~ 185 (463)
..|+|.++.|+++++.|.|... ..+.++.+|..+. .+.||.+... .......|.|||.+...+++++. .
T Consensus 84 lGP~Ira~~GD~v~V~~~N~~~-~p~siH~HG~~~~-~~~dg~~~~~~~~~~~~~~~~~~~~V~PGet~tY~w~v~~~-~ 160 (207)
T d2j5wa3 84 LGPVIWAEVGDTIRVTFHNKGA-YPLSIEPIGVRFN-KNNEGTYYSPNYNPQSRSVPPSASHVAPTETFTYEWTVPKE-V 160 (207)
T ss_dssp SCCCEEEETTEEEEEEEEECSS-SCBCCEEESSBCC-GGGCSBCCBCC-------CCCCSSCBCTTCEEEEEEECCGG-G
T ss_pred cCceEEEECCCEEEEEEEECCC-CCccccccccccC-cccccccccCCCCcccCCcCcccceecCCCEEEEEEEecCC-C
Confidence 4479999999999999999874 4455666554321 2345544321 11223458999999999998763 3
Q ss_pred C---------ceEEEEE
Q 012467 186 Y---------NYWISAG 193 (463)
Q Consensus 186 g---------~y~ir~~ 193 (463)
| +||-...
T Consensus 161 gP~~~d~~c~T~~YHsh 177 (207)
T d2j5wa3 161 GPTNADPVCLAKMYYSA 177 (207)
T ss_dssp SCCSSSCSEEEEEEECB
T ss_pred CCccCCCCceeEEEccC
Confidence 3 6776654
|