Citrus Sinensis ID: 012506
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 462 | 2.2.26 [Sep-21-2011] | |||||||
| Q56WD9 | 462 | 3-ketoacyl-CoA thiolase 2 | yes | no | 0.995 | 0.995 | 0.891 | 0.0 | |
| Q8LF48 | 443 | 3-ketoacyl-CoA thiolase 1 | no | no | 0.958 | 1.0 | 0.838 | 0.0 | |
| Q570C8 | 457 | 3-ketoacyl-CoA thiolase 5 | no | no | 0.961 | 0.971 | 0.712 | 0.0 | |
| Q921H8 | 424 | 3-ketoacyl-CoA thiolase A | yes | no | 0.904 | 0.985 | 0.560 | 1e-131 | |
| Q8VCH0 | 424 | 3-ketoacyl-CoA thiolase B | yes | no | 0.904 | 0.985 | 0.560 | 1e-131 | |
| P07871 | 424 | 3-ketoacyl-CoA thiolase B | yes | no | 0.909 | 0.990 | 0.561 | 1e-130 | |
| P21775 | 424 | 3-ketoacyl-CoA thiolase A | yes | no | 0.904 | 0.985 | 0.556 | 1e-129 | |
| P09110 | 424 | 3-ketoacyl-CoA thiolase, | yes | no | 0.906 | 0.988 | 0.550 | 1e-128 | |
| Q05493 | 414 | 3-ketoacyl-CoA thiolase, | yes | no | 0.833 | 0.929 | 0.548 | 1e-105 | |
| P33291 | 408 | 3-ketoacyl-CoA thiolase B | N/A | no | 0.822 | 0.931 | 0.482 | 1e-96 |
| >sp|Q56WD9|THIK2_ARATH 3-ketoacyl-CoA thiolase 2, peroxisomal OS=Arabidopsis thaliana GN=PED1 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 841 bits (2172), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/460 (89%), Positives = 436/460 (94%)
Query: 1 MEKAINRQQVLLEHLRPSNSSSHNYESILSASACAAGDSAAYHRTSVYGDDVVIVAAYRT 60
MEKAI RQ+VLLEHLRPS+SSSHNYE+ LSASAC AGDSAAY RTS+YGDDVVIVAA+RT
Sbjct: 1 MEKAIERQRVLLEHLRPSSSSSHNYEASLSASACLAGDSAAYQRTSLYGDDVVIVAAHRT 60
Query: 61 ALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAA 120
LCKSKRG FKDTYPDDLLAPVL+A+IEKTN++PSEVGDIVVGTVLAPGSQRASECRMAA
Sbjct: 61 PLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAA 120
Query: 121 FYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVN 180
FYAGFPETV VRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMT NPMAWEGSVN
Sbjct: 121 FYAGFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWEGSVN 180
Query: 181 PKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIP 240
P VK F QAQNCLLPMGVTSENVA RFGV+R+EQDQAAVDSHRKAAAATAAGKFKDEIIP
Sbjct: 181 PAVKKFAQAQNCLLPMGVTSENVAQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIP 240
Query: 241 VATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGA 300
V TK+VDPKTGDEKP+T+SVDDGIRP T+++ L KLKPVFKKDGTTTAGNSSQVSDGAGA
Sbjct: 241 VKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGKLKPVFKKDGTTTAGNSSQVSDGAGA 300
Query: 301 VLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEI 360
VLLMKRSVAM+KGLP+LGVFRTFAAVGVDPAIMG+GPAVAIPAAVK+AGL+LDDIDLFEI
Sbjct: 301 VLLMKRSVAMQKGLPVLGVFRTFAAVGVDPAIMGIGPAVAIPAAVKAAGLELDDIDLFEI 360
Query: 361 NEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFG 420
NEAFASQFVYCRNKLGLDPEKINVNGGA+AIGHPLG TGARCVATLLHEMKRRG+DCRFG
Sbjct: 361 NEAFASQFVYCRNKLGLDPEKINVNGGAMAIGHPLGATGARCVATLLHEMKRRGKDCRFG 420
Query: 421 VISMCIGTGMGAAAVFERGDCADELCNVRKVESNNFLSKD 460
V+SMCIGTGMGAAAVFERGD DEL N RKVE+ LSKD
Sbjct: 421 VVSMCIGTGMGAAAVFERGDGVDELRNARKVEAQGLLSKD 460
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Involved in long chain fatty-acid beta-oxidation prior to gluconeogenesis during germination and subsequent seedling growth. Confers sensitivity to 2,4-dichlorophenoxybutiric acid (2,4-DB). Required for local and systemic induction of jasmonic acid (JA) biosynthesis after wounding. Seems to be involved in JA biosynthesis during senescence. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 1EC: 6 |
| >sp|Q8LF48|THIK1_ARATH 3-ketoacyl-CoA thiolase 1, peroxisomal OS=Arabidopsis thaliana GN=KAT1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 765 bits (1976), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/451 (83%), Positives = 416/451 (92%), Gaps = 8/451 (1%)
Query: 1 MEKAINRQQVLLEHLRPSNSSSHNYESILSASACAAGDSAAYHRTSVYGDDVVIVAAYRT 60
MEKA RQ++LL HL+PS+SS + LSASAC + DSAAY YGDDVVIVAA RT
Sbjct: 1 MEKATERQRILLRHLQPSSSSD----ASLSASACLSKDSAAYQ----YGDDVVIVAAQRT 52
Query: 61 ALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAA 120
ALCK+KRG FKDT+PD+LLA VL+A+IEKTNV+PSEVGDIVVGTVL PGSQRASECRMAA
Sbjct: 53 ALCKAKRGSFKDTFPDELLASVLRALIEKTNVNPSEVGDIVVGTVLGPGSQRASECRMAA 112
Query: 121 FYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVN 180
FYAGFPETVP+RTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMT NP W+GSVN
Sbjct: 113 FYAGFPETVPIRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPRGWKGSVN 172
Query: 181 PKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIP 240
P VK FEQA NCLLPMG+TSENVAHRF V+R+EQDQAAVDSHRKAA+ATA+GKFKDEI P
Sbjct: 173 PNVKKFEQAHNCLLPMGITSENVAHRFNVSREEQDQAAVDSHRKAASATASGKFKDEITP 232
Query: 241 VATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGA 300
V TKIVDPKTGDEKP+T+SVDDGIRPNT++S LAKLKPVFK+DGTTTAGNSSQ+SDGAGA
Sbjct: 233 VKTKIVDPKTGDEKPITVSVDDGIRPNTTLSGLAKLKPVFKEDGTTTAGNSSQLSDGAGA 292
Query: 301 VLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEI 360
VLLM+R+VAM+KGLPILGVFRTF+AVGVDPAIMGVGPAVAIPAAVK+AGL+L+D+DLFEI
Sbjct: 293 VLLMRRNVAMQKGLPILGVFRTFSAVGVDPAIMGVGPAVAIPAAVKAAGLELNDVDLFEI 352
Query: 361 NEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFG 420
NEAFASQFVYCRNKLGLD EKINVNGGA+AIGHPLG TGARCVATLLHEMKRRG+DCRFG
Sbjct: 353 NEAFASQFVYCRNKLGLDAEKINVNGGAIAIGHPLGATGARCVATLLHEMKRRGKDCRFG 412
Query: 421 VISMCIGTGMGAAAVFERGDCADELCNVRKV 451
V+SMCIG+GMGAAAVFERG DELC+VRKV
Sbjct: 413 VVSMCIGSGMGAAAVFERGGGVDELCDVRKV 443
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Involved in fatty-acid beta-oxidation prior to gluconeogenesis during germination and subsequent seedling growth. Implicated in jasmonic acid (JA) biosynthesis. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 6 |
| >sp|Q570C8|THIK5_ARATH 3-ketoacyl-CoA thiolase 5, peroxisomal OS=Arabidopsis thaliana GN=KAT5 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 668 bits (1723), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/455 (71%), Positives = 392/455 (86%), Gaps = 11/455 (2%)
Query: 1 MEKAINRQQVLLEHLRP---SNSSSHNYESILSASACAAGDSAAYHRTSVYGDDVVIVAA 57
ME+A+ RQ++LL HL P SNSS + S+LS C + S + +GDD+VIVAA
Sbjct: 1 MERAMERQKILLRHLNPVSSSNSSLKHEPSLLSPVNCVSEVSP----MAAFGDDIVIVAA 56
Query: 58 YRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECR 117
YRTA+CK++RGGFKDT PDDLLA VLKAV+E+T++DPSEVGDIVVGTV+APGSQRA ECR
Sbjct: 57 YRTAICKARRGGFKDTLPDDLLASVLKAVVERTSLDPSEVGDIVVGTVIAPGSQRAMECR 116
Query: 118 MAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPM---A 174
+AA++AGFP++VPVRTVNRQCSSGLQAVADVAA+I+AG+YDIGIGAG+ESM+ + +
Sbjct: 117 VAAYFAGFPDSVPVRTVNRQCSSGLQAVADVAASIRAGYYDIGIGAGVESMSTDHIPGGG 176
Query: 175 WEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKF 234
+ GS NP+ + F +A++CLLPMG+TSENVA RFGVTR+EQD AAV+SH++AAAA A+GK
Sbjct: 177 FHGS-NPRAQDFPKARDCLLPMGITSENVAERFGVTREEQDMAAVESHKRAAAAIASGKL 235
Query: 235 KDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQV 294
KDEIIPVATKIVDP+T EK + +SVDDG+RPN+++++LAKLK VFK++G+TTAGN+SQ+
Sbjct: 236 KDEIIPVATKIVDPETKAEKAIVVSVDDGVRPNSNMADLAKLKTVFKQNGSTTAGNASQI 295
Query: 295 SDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDD 354
SDGAGAVLLMKRS+AM+KGLPILGVFR+FA GV+P++MG+GPAVAIPAA K AGL + D
Sbjct: 296 SDGAGAVLLMKRSLAMKKGLPILGVFRSFAVTGVEPSVMGIGPAVAIPAATKLAGLNVSD 355
Query: 355 IDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG 414
IDLFEINEAFASQ+VY KL LD EK+NVNGGA+AIGHPLG TGARCVATLLHEMKRRG
Sbjct: 356 IDLFEINEAFASQYVYSCKKLELDMEKVNVNGGAIAIGHPLGATGARCVATLLHEMKRRG 415
Query: 415 RDCRFGVISMCIGTGMGAAAVFERGDCADELCNVR 449
+DCRFGVISMCIGTGMGAAAVFERGD D L N R
Sbjct: 416 KDCRFGVISMCIGTGMGAAAVFERGDSVDNLSNAR 450
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Probably involved in long chain fatty-acid beta-oxidation prior to gluconeogenesis during germination and subsequent seedling growth. Involved in systemic jasmonic acid (JA) biosynthesis after wounding and may be during senescence. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 6 |
| >sp|Q921H8|THIKA_MOUSE 3-ketoacyl-CoA thiolase A, peroxisomal OS=Mus musculus GN=Acaa1a PE=2 SV=1 | Back alignment and function description |
|---|
Score = 469 bits (1206), Expect = e-131, Method: Compositional matrix adjust.
Identities = 244/435 (56%), Positives = 324/435 (74%), Gaps = 17/435 (3%)
Query: 5 INRQQVLLEHL--RPSNSSSHNYESILSASACAAGDSAAYHRTSVYGDDVVIVAAYRTAL 62
++R QV+L HL RP +SS+ L A+ C SA + + S DVV+V RT +
Sbjct: 1 MHRLQVVLGHLAGRPESSSA------LQAAPC----SARFPQASA--SDVVVVHGRRTPI 48
Query: 63 CKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFY 122
++ RGGFK+T PD+LL+ VL AV++ + P ++GDI VG VL PG+ A R+A F
Sbjct: 49 GRASRGGFKNTTPDELLSAVLTAVLQDVRLKPEQLGDISVGNVLEPGAG-AVMARIAQFL 107
Query: 123 AGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPK 182
+G PETVP+ TVNRQCSSGLQAVA++A I+ G YDIG+ G+ESM+++ M G+++ +
Sbjct: 108 SGIPETVPLSTVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMSLSGMGNPGNISSR 167
Query: 183 VKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVA 242
+ E+A++CL PMG+TSENVA RFG++R++QD A+ S +KAA+A + G F+ EI+PV
Sbjct: 168 LLESEKARDCLTPMGMTSENVAERFGISRQKQDDFALASQQKAASAQSRGCFRAEIVPVT 227
Query: 243 TKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVL 302
T ++D K GD+K +T+S D+G+RP+T++ LAKLKP FK G+TTAGNSSQVSDGA AVL
Sbjct: 228 TTVLDDK-GDKKTITVSQDEGVRPSTTMQGLAKLKPAFKDGGSTTAGNSSQVSDGAAAVL 286
Query: 303 LMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINE 362
L +RS A GLPILGV R++A VGV P +MG+GPA AIPAA++ AGL ++DID+FEINE
Sbjct: 287 LARRSKAEELGLPILGVLRSYAVVGVPPDVMGIGPAYAIPAALQKAGLTVNDIDIFEINE 346
Query: 363 AFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVI 422
AFASQ VYC KLG+ EK+N GGA+A+GHPLG TGAR V TLL+E+KRRGR +GV+
Sbjct: 347 AFASQAVYCVEKLGIPAEKVNPLGGAIALGHPLGCTGARQVVTLLNELKRRGRRA-YGVV 405
Query: 423 SMCIGTGMGAAAVFE 437
SMCIGTGMGAAAVFE
Sbjct: 406 SMCIGTGMGAAAVFE 420
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Mus musculus (taxid: 10090) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 6 |
| >sp|Q8VCH0|THIKB_MOUSE 3-ketoacyl-CoA thiolase B, peroxisomal OS=Mus musculus GN=Acaa1b PE=2 SV=1 | Back alignment and function description |
|---|
Score = 467 bits (1201), Expect = e-131, Method: Compositional matrix adjust.
Identities = 244/435 (56%), Positives = 323/435 (74%), Gaps = 17/435 (3%)
Query: 5 INRQQVLLEHL--RPSNSSSHNYESILSASACAAGDSAAYHRTSVYGDDVVIVAAYRTAL 62
++R QV+L HL RP +SS+ L A+ C+AG + + S DVV+V RT +
Sbjct: 1 MHRLQVVLGHLAGRPESSSA------LQAAPCSAG----FLQASA--SDVVVVHGRRTPI 48
Query: 63 CKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFY 122
++ RG FKDT PD+LL+ VL AV++ + P ++GDI VG VL PG+ A R+A F
Sbjct: 49 GRASRGCFKDTTPDELLSAVLTAVLQDVKLKPEQLGDISVGNVLQPGAG-AIMARIAQFL 107
Query: 123 AGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPK 182
+G PETVP+ TVNRQCSSGLQAVA++A I+ G YDIG+ G+ESMT++ G+++ +
Sbjct: 108 SGIPETVPLSTVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMTLSQRGNHGNISSR 167
Query: 183 VKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVA 242
+ E+A++CL+PMG+TSENVA RFGV+R++QD A+ S +KAA+A + G F EI+PV
Sbjct: 168 LLENEKARDCLIPMGITSENVAERFGVSRQKQDAFALASQQKAASAQSRGCFHAEIVPVT 227
Query: 243 TKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVL 302
T +++ K GD+K +T+S D+G+RP+T++ LAKLKP FK G+TTAGNSSQVSDGA AVL
Sbjct: 228 TTVLNDK-GDKKTITVSQDEGVRPSTTMQGLAKLKPAFKDGGSTTAGNSSQVSDGAAAVL 286
Query: 303 LMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINE 362
L +RS A GLPILGV R++A VGV P +MG+GPA AIPAA++ AGL ++DID+FEINE
Sbjct: 287 LARRSKAEELGLPILGVLRSYAVVGVPPDVMGIGPAYAIPAALQKAGLTVNDIDIFEINE 346
Query: 363 AFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVI 422
AFASQ VYC KLG+ EK+N GGA+A+GHPLG TGAR V TLL+E+KRRGR +GV+
Sbjct: 347 AFASQAVYCVEKLGIPAEKVNPLGGAIALGHPLGCTGARQVVTLLNELKRRGRRA-YGVV 405
Query: 423 SMCIGTGMGAAAVFE 437
SMCIGTGMGAAAVFE
Sbjct: 406 SMCIGTGMGAAAVFE 420
|
Mus musculus (taxid: 10090) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 6 |
| >sp|P07871|THIKB_RAT 3-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus norvegicus GN=Acaa1b PE=2 SV=2 | Back alignment and function description |
|---|
Score = 467 bits (1201), Expect = e-130, Method: Compositional matrix adjust.
Identities = 243/433 (56%), Positives = 319/433 (73%), Gaps = 13/433 (3%)
Query: 5 INRQQVLLEHLRPSNSSSHNYESILSASACAAGDSAAYHRTSVYGDDVVIVAAYRTALCK 64
++R QV+L HL + SS S L A+ C+AG A DVV+V RT + +
Sbjct: 1 MHRLQVVLGHLAGRSESS----SALQAAPCSAGFPQAS------ASDVVVVHGRRTPIGR 50
Query: 65 SKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAG 124
+ RGGFKDT PD+LL+ VL AV++ + P +GDI VG VL PG+ A+ R+A F +G
Sbjct: 51 AGRGGFKDTTPDELLSAVLTAVLQDVKLKPECLGDISVGNVLQPGAG-AAMARIAQFLSG 109
Query: 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVK 184
PETVP+ VNRQCSSGLQAVA++A I+ G YDIG+ G+ESMT++ G+++ ++
Sbjct: 110 IPETVPLSAVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMTLSERGNPGNISSRLL 169
Query: 185 AFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATK 244
E+A++CL+PMG+TSENVA RFG++R++QD A+ S +KAA+A + G F+ EI+PV T
Sbjct: 170 ENEKARDCLIPMGITSENVAERFGISRQKQDAFALASQQKAASAQSKGCFRAEIVPVTTT 229
Query: 245 IVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLM 304
++D K GD K +T+S D+G+RP+T++ LAKLKP FK G+TTAGNSSQVSDGA AVLL
Sbjct: 230 VLDDK-GDRKTITVSQDEGVRPSTTMEGLAKLKPAFKDGGSTTAGNSSQVSDGAAAVLLA 288
Query: 305 KRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAF 364
+RS A GLPILGV R++A VGV P IMG+GPA AIPAA++ AGL ++DID+FEINEAF
Sbjct: 289 RRSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAYAIPAALQKAGLTVNDIDIFEINEAF 348
Query: 365 ASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISM 424
ASQ +YC KLG+ EK+N GGA+A+GHPLG TGAR V TLL+E+KRRGR +GV+SM
Sbjct: 349 ASQALYCVEKLGIPAEKVNPLGGAIALGHPLGCTGARQVVTLLNELKRRGRRA-YGVVSM 407
Query: 425 CIGTGMGAAAVFE 437
CIGTGMGAAAVFE
Sbjct: 408 CIGTGMGAAAVFE 420
|
Rattus norvegicus (taxid: 10116) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 6 |
| >sp|P21775|THIKA_RAT 3-ketoacyl-CoA thiolase A, peroxisomal OS=Rattus norvegicus GN=Acaa1a PE=2 SV=2 | Back alignment and function description |
|---|
Score = 462 bits (1189), Expect = e-129, Method: Compositional matrix adjust.
Identities = 242/435 (55%), Positives = 321/435 (73%), Gaps = 17/435 (3%)
Query: 5 INRQQVLLEHL--RPSNSSSHNYESILSASACAAGDSAAYHRTSVYGDDVVIVAAYRTAL 62
++R QV+L HL RP +SS+ L A+ C SA + + S DVV+V RT +
Sbjct: 1 MHRLQVVLGHLAGRPESSSA------LQAAPC----SATFPQASA--SDVVVVHGRRTPI 48
Query: 63 CKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFY 122
++ RGGFKDT PD+LL+ VL AV++ + P +GDI VG VL PG+ A R+A F
Sbjct: 49 GRAGRGGFKDTTPDELLSAVLTAVLQDVKLKPECLGDISVGNVLEPGAG-AVMARIAQFL 107
Query: 123 AGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPK 182
+G PETVP+ VNRQCSSGLQAVA++A I+ G YDIG+ G+ESM+++ G+++ +
Sbjct: 108 SGIPETVPLSAVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMSLSNRGNPGNISSR 167
Query: 183 VKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVA 242
+ ++A++CL+PMG+TSENVA RFG++R++QD A+ S +KAA+A + G F+ EI+PV
Sbjct: 168 LLESDKARDCLIPMGITSENVAERFGISRQKQDAFALASQQKAASAQSKGCFRAEIVPVT 227
Query: 243 TKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVL 302
T ++D K GD K +T+S D+G+RP+T++ LAKLKP FK G+TTAGNSSQVSDGA AVL
Sbjct: 228 TTVLDDK-GDRKTITVSQDEGVRPSTTMEGLAKLKPAFKDGGSTTAGNSSQVSDGAAAVL 286
Query: 303 LMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINE 362
L +RS A GLPILGV R++A VGV P IMG+GPA AIPAA++ AGL ++DID+FEINE
Sbjct: 287 LARRSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAYAIPAALQKAGLTVNDIDIFEINE 346
Query: 363 AFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVI 422
AFASQ +YC KLG+ EK+N GGA+A+GHPLG TGAR V TLL+E+KRRGR +GV+
Sbjct: 347 AFASQALYCVEKLGIPAEKVNPLGGAIALGHPLGCTGARQVVTLLNELKRRGRRA-YGVV 405
Query: 423 SMCIGTGMGAAAVFE 437
SMCIGTGMGAAAVFE
Sbjct: 406 SMCIGTGMGAAAVFE 420
|
Rattus norvegicus (taxid: 10116) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 6 |
| >sp|P09110|THIK_HUMAN 3-ketoacyl-CoA thiolase, peroxisomal OS=Homo sapiens GN=ACAA1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 459 bits (1180), Expect = e-128, Method: Compositional matrix adjust.
Identities = 239/434 (55%), Positives = 315/434 (72%), Gaps = 15/434 (3%)
Query: 5 INRQQVLLEHLR-PSNSSSHNYESILSASACAAGDSAAYHRTSVYGDDVVIVAAYRTALC 63
+ R QV+L HLR P++S + A+ C +G A DVV+V RTA+C
Sbjct: 1 MQRLQVVLGHLRGPADSGW-----MPQAAPCLSGAPQAS------AADVVVVHGRRTAIC 49
Query: 64 KSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYA 123
++ RGGFKDT PD+LL+ V+ AV++ N+ P ++GDI VG VL PG+ A R+A F +
Sbjct: 50 RAGRGGFKDTTPDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPGAG-AIMARIAQFLS 108
Query: 124 GFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKV 183
PETVP+ TVNRQCSSGLQAVA +A I+ G YDIG+ G+ESM++ G++ ++
Sbjct: 109 DIPETVPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSLADRGNPGNITSRL 168
Query: 184 KAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVAT 243
E+A++CL+PMG+TSENVA RFG++R++QD A+ S +KAA A + G F+ EI+PV T
Sbjct: 169 MEKEKARDCLIPMGITSENVAERFGISREKQDTFALASQQKAARAQSKGCFQAEIVPVTT 228
Query: 244 KIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLL 303
+ D K G ++ +T++ D+GIRP+T++ LAKLKP FKKDG+TTAGNSSQVSDGA A+LL
Sbjct: 229 TVHDDK-GTKRSITVTQDEGIRPSTTMEGLAKLKPAFKKDGSTTAGNSSQVSDGAAAILL 287
Query: 304 MKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEA 363
+RS A GLPILGV R++A VGV P IMG+GPA AIP A++ AGL + D+D+FEINEA
Sbjct: 288 ARRSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAYAIPVALQKAGLTVSDVDIFEINEA 347
Query: 364 FASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVIS 423
FASQ YC KL L PEK+N GGA+A+GHPLG TGAR V TLL+E+KRRG+ +GV+S
Sbjct: 348 FASQAAYCVEKLRLPPEKVNPLGGAVALGHPLGCTGARQVITLLNELKRRGKRA-YGVVS 406
Query: 424 MCIGTGMGAAAVFE 437
MCIGTGMGAAAVFE
Sbjct: 407 MCIGTGMGAAAVFE 420
|
Homo sapiens (taxid: 9606) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 6 |
| >sp|Q05493|THIK_YARLI 3-ketoacyl-CoA thiolase, peroxisomal OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=POT1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 381 bits (978), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/394 (54%), Positives = 275/394 (69%), Gaps = 9/394 (2%)
Query: 45 TSVYGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGT 104
TS DDVVI AAYRTA K +G FKDT +LLA +L+ +++++ +DP +GD+V G
Sbjct: 23 TSKNPDDVVITAAYRTAHTKGGKGLFKDTSSSELLASLLEGLVKESKIDPKLIGDVVCGN 82
Query: 105 VLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAG 164
VLA G+ A+E R A AG PETVP +NRQCSSGL AV DVA I+AG DIGIG G
Sbjct: 83 VLAAGAG-ATEHRAACLVAGIPETVPFVALNRQCSSGLMAVNDVANKIRAGQIDIGIGCG 141
Query: 165 LESMTVNPMAWEGSVNP---KVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDS 221
+ESM+ SV P K + E+A+ CL+PMG+TSENVA ++ V+RK QD A S
Sbjct: 142 VESMS--NQYGPNSVTPFSNKFQNNEEAKKCLIPMGITSENVAAKYNVSRKAQDAFAAKS 199
Query: 222 HRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFK 281
+ KAAAA AAGKF EI+P+ T ++D +EK VT++ DDGIRP + +L KLKP F
Sbjct: 200 YEKAAAAQAAGKFDQEILPIKTTVLDDDD-NEKEVTVNKDDGIRPGVTAEKLGKLKPAFS 258
Query: 282 KDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAI 341
+GTT AGN+SQ+SDGAGAVLLM+RSVA + G PIL F VGV P +MG+GPA AI
Sbjct: 259 AEGTTHAGNASQISDGAGAVLLMRRSVAEKLGQPILAKFVHCKTVGVPPELMGIGPAYAI 318
Query: 342 PAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGAR 401
PA ++ GL ++D+D+FEINEAFASQ ++ G+D K+N GGA+AIGHPLG TGAR
Sbjct: 319 PAVLEDLGLTVNDVDVFEINEAFASQALFSIQHCGIDESKVNPRGGAIAIGHPLGATGAR 378
Query: 402 CVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAV 435
ATLL E+K G+ + GV SMCIGTGMGAA++
Sbjct: 379 QFATLLSELKESGK--KVGVTSMCIGTGMGAASL 410
|
Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 6 |
| >sp|P33291|THIKB_CANTR 3-ketoacyl-CoA thiolase B, peroxisomal OS=Candida tropicalis PE=3 SV=1 | Back alignment and function description |
|---|
Score = 353 bits (907), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 189/392 (48%), Positives = 259/392 (66%), Gaps = 12/392 (3%)
Query: 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPG 109
DDVVIVAAYRTA+ K +G F++ + + +L LK I+KTN+DPS + D+ +G VL
Sbjct: 25 DDVVIVAAYRTAIGKGFKGSFRNVHSEFILTEFLKEFIKKTNIDPSLIEDVAIGNVLNQA 84
Query: 110 SQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMT 169
+ A+E R A AG P T VNR CSSGL A++D+A IK G + G+ G ESM+
Sbjct: 85 AG-ATEHRGACLAAGIPYTAAFIAVNRFCSSGLMAISDIANKIKTGEIECGLAGGAESMS 143
Query: 170 VN---PMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAA 226
N P ++P + Q + CL+PMG+T+ENVA++F ++R+ QD+ A S+ KAA
Sbjct: 144 TNYRDPRVAP-RIDPHLADDAQMEKCLIPMGITNENVANQFNISRERQDEFAAKSYNKAA 202
Query: 227 AATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTT 286
A A+G FK EI+P+ + I+ G EK + + D+G R + L KL+P F DGTT
Sbjct: 203 KAVASGAFKSEILPIRS-IIRNSDGTEKEIIVDTDEGPREGVTAESLGKLRPAF--DGTT 259
Query: 287 TAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVK 346
TAGN+SQVSDGA AVLLMKRS+A KG PI+G + + GV P IMGVGPA AIP +K
Sbjct: 260 TAGNASQVSDGAAAVLLMKRSLAEAKGYPIIGKYVLCSTAGVPPEIMGVGPAFAIPEVLK 319
Query: 347 SAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATL 406
GL +DDID+FEINEAFA+Q +Y ++ + EK+N+NGGA+A+GHPLG TGAR AT+
Sbjct: 320 RTGLTVDDIDVFEINEAFAAQCLYSAEQVNVPEEKLNINGGAIALGHPLGETGARQYATI 379
Query: 407 LHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438
+ +K + G+ SMCIG+GMG+A++ R
Sbjct: 380 IPLLK----PGQIGLTSMCIGSGMGSASILVR 407
|
Candida tropicalis (taxid: 5482) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 6 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 462 | ||||||
| 449432452 | 462 | PREDICTED: 3-ketoacyl-CoA thiolase 2, pe | 0.993 | 0.993 | 0.882 | 0.0 | |
| 442569925 | 464 | 3-ketoacyl-CoA thiolase 1 [Rehmannia glu | 0.995 | 0.991 | 0.883 | 0.0 | |
| 440808089 | 464 | 3-ketoacyl-CoA thiolase 2 [Rehmannia glu | 0.995 | 0.991 | 0.883 | 0.0 | |
| 15225798 | 462 | 3-ketoacyl-CoA thiolase 2 [Arabidopsis t | 0.995 | 0.995 | 0.891 | 0.0 | |
| 224057614 | 460 | predicted protein [Populus trichocarpa] | 0.991 | 0.995 | 0.876 | 0.0 | |
| 147866537 | 461 | hypothetical protein VITISV_023191 [Viti | 0.993 | 0.995 | 0.882 | 0.0 | |
| 7433647 | 461 | acetyl-CoA C-acyltransferase (EC 2.3.1.1 | 0.993 | 0.995 | 0.880 | 0.0 | |
| 297826765 | 462 | hypothetical protein ARALYDRAFT_482251 [ | 0.995 | 0.995 | 0.882 | 0.0 | |
| 225433424 | 461 | PREDICTED: 3-ketoacyl-CoA thiolase 2, pe | 0.993 | 0.995 | 0.878 | 0.0 | |
| 449442365 | 461 | PREDICTED: 3-ketoacyl-CoA thiolase 2, pe | 0.997 | 1.0 | 0.874 | 0.0 |
| >gi|449432452|ref|XP_004134013.1| PREDICTED: 3-ketoacyl-CoA thiolase 2, peroxisomal-like [Cucumis sativus] gi|449487514|ref|XP_004157664.1| PREDICTED: 3-ketoacyl-CoA thiolase 2, peroxisomal-like [Cucumis sativus] gi|393707|emb|CAA47926.1| 3-ketoacyl-CoA thiolase [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 845 bits (2183), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/461 (88%), Positives = 438/461 (95%), Gaps = 2/461 (0%)
Query: 1 MEKAINRQQVLLEHLRPSNSSSHNYESILSASACAAGDSAAYHRTSVYGDDVVIVAAYRT 60
MEKAINRQ +LL HLRPS SS++ ES LSAS CAAGDSA+Y RTSV+GDDVVIVAAYRT
Sbjct: 1 MEKAINRQSILLHHLRPS-SSAYTNESSLSASVCAAGDSASYQRTSVFGDDVVIVAAYRT 59
Query: 61 ALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAA 120
A+CKSKRGGFKDTYPDDLLAPVLKA+IEKTN++PSEVGDIVVG+VLAPGSQRASECRMAA
Sbjct: 60 AICKSKRGGFKDTYPDDLLAPVLKALIEKTNLNPSEVGDIVVGSVLAPGSQRASECRMAA 119
Query: 121 FYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVN 180
FYAGFPETVPVRTVNRQCSSGLQAVADVAAAI+AGFYDIGIGAGLESMT NPMAWEGSVN
Sbjct: 120 FYAGFPETVPVRTVNRQCSSGLQAVADVAAAIRAGFYDIGIGAGLESMTTNPMAWEGSVN 179
Query: 181 PKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIP 240
P+VK+ E AQNCLLPMGVTSENVA RFGV+R++QDQAA++SHRKAAAATA+GKFKDEIIP
Sbjct: 180 PRVKSIENAQNCLLPMGVTSENVAQRFGVSREKQDQAAIESHRKAAAATASGKFKDEIIP 239
Query: 241 VATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGA 300
V+TKI+DPKTG EKPVTISVDDGIRPNT+ ++L KLK VFKKDGTTTAGNSSQVSDGAGA
Sbjct: 240 VSTKIIDPKTGQEKPVTISVDDGIRPNTTQADLGKLKAVFKKDGTTTAGNSSQVSDGAGA 299
Query: 301 VLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEI 360
VLLMKRSVAMRKGLPILGVFRTF+AVGVDPAIMGVGPAVAIPAAVK+AGL+L+DIDLFEI
Sbjct: 300 VLLMKRSVAMRKGLPILGVFRTFSAVGVDPAIMGVGPAVAIPAAVKAAGLELNDIDLFEI 359
Query: 361 NEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFG 420
NEAFASQFVYCRNKLGLDPEKINVNGGA+AIGHPLG TGARCVATLLHEMKRRG+DCRFG
Sbjct: 360 NEAFASQFVYCRNKLGLDPEKINVNGGAIAIGHPLGATGARCVATLLHEMKRRGKDCRFG 419
Query: 421 VISMCIGTGMGAAAVFERGDCADELCNVRKVESN-NFLSKD 460
VISMCIGTGMGAAAVFERGDC DELCN +KVE N LSKD
Sbjct: 420 VISMCIGTGMGAAAVFERGDCVDELCNAKKVEGGVNLLSKD 460
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|442569925|gb|AGC59769.1| 3-ketoacyl-CoA thiolase 1 [Rehmannia glutinosa] | Back alignment and taxonomy information |
|---|
Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/462 (88%), Positives = 439/462 (95%), Gaps = 2/462 (0%)
Query: 1 MEKAINRQQVLLEHLRPSNSSS--HNYESILSASACAAGDSAAYHRTSVYGDDVVIVAAY 58
MEKA RQ+VLL+HLRPS +SS + ES +SAS C+AGDSAAYHR+SV+GDDVVIVAAY
Sbjct: 1 MEKATERQRVLLQHLRPSFTSSSLEDIESSVSASICSAGDSAAYHRSSVFGDDVVIVAAY 60
Query: 59 RTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRM 118
RTALCKSKRGGFKDTYPDDLLAPVL+AV+EKTNV+P+EVGDIVVGTVLAPGSQRASECRM
Sbjct: 61 RTALCKSKRGGFKDTYPDDLLAPVLRAVVEKTNVNPNEVGDIVVGTVLAPGSQRASECRM 120
Query: 119 AAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGS 178
AAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGS
Sbjct: 121 AAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGS 180
Query: 179 VNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEI 238
VNP+VK+ QAQ+CLLPMG+TSENVAHRFGVTR+EQDQAAVDSHRKAAAATA+GKFKDEI
Sbjct: 181 VNPRVKSMAQAQDCLLPMGITSENVAHRFGVTRQEQDQAAVDSHRKAAAATASGKFKDEI 240
Query: 239 IPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGA 298
IPV TKIVDPK+GDEKPVTISVDDGIRPNTSV++L KLKPVFKKDG+TTAGNSSQVSDGA
Sbjct: 241 IPVKTKIVDPKSGDEKPVTISVDDGIRPNTSVADLGKLKPVFKKDGSTTAGNSSQVSDGA 300
Query: 299 GAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLF 358
GAVLLMKRSVAM+KGLPILGVFR+FAAVGVDPAIMGVGPAVAIPAAVKSAGL+L DIDLF
Sbjct: 301 GAVLLMKRSVAMQKGLPILGVFRSFAAVGVDPAIMGVGPAVAIPAAVKSAGLELGDIDLF 360
Query: 359 EINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCR 418
E+NEAFASQFVYCR KL LDPEKINVNGGA+AIGHPLG TGARCVATLLHEMKRRG+DCR
Sbjct: 361 EVNEAFASQFVYCRKKLELDPEKINVNGGAMAIGHPLGVTGARCVATLLHEMKRRGKDCR 420
Query: 419 FGVISMCIGTGMGAAAVFERGDCADELCNVRKVESNNFLSKD 460
FGV+SMCIGTGMGAAAVFERGD DEL N R V ++NFLSKD
Sbjct: 421 FGVVSMCIGTGMGAAAVFERGDSCDELSNARTVGTHNFLSKD 462
|
Source: Rehmannia glutinosa Species: Rehmannia glutinosa Genus: Rehmannia Family: Order: Lamiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|440808089|gb|AGC24176.1| 3-ketoacyl-CoA thiolase 2 [Rehmannia glutinosa] | Back alignment and taxonomy information |
|---|
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/462 (88%), Positives = 438/462 (94%), Gaps = 2/462 (0%)
Query: 1 MEKAINRQQVLLEHLRPSNSSS--HNYESILSASACAAGDSAAYHRTSVYGDDVVIVAAY 58
MEKA RQ+VLL+HLRPS +SS + ES +SAS C+AGDSAAYHR+SV+GDDVVIVAAY
Sbjct: 1 MEKATERQRVLLQHLRPSFTSSSLEDIESSVSASICSAGDSAAYHRSSVFGDDVVIVAAY 60
Query: 59 RTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRM 118
RTALCKSKRGGFKDTYPDDLLAPVL+AV+EKTNV+P+EVGDIVVGTVLAPGSQRASECRM
Sbjct: 61 RTALCKSKRGGFKDTYPDDLLAPVLRAVVEKTNVNPNEVGDIVVGTVLAPGSQRASECRM 120
Query: 119 AAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGS 178
AAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGS
Sbjct: 121 AAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGS 180
Query: 179 VNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEI 238
VNP+VK+ QAQ+CLLPMG+TSENVAHRFGVTR+EQDQAAVDSHRKAAAATA+GKFKDEI
Sbjct: 181 VNPRVKSMAQAQDCLLPMGITSENVAHRFGVTRQEQDQAAVDSHRKAAAATASGKFKDEI 240
Query: 239 IPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGA 298
IPV TKIVDPK+GDEKPVTISVDDGIRPNTSV++L KLKPVFKKDG+TTAGNSSQVSDGA
Sbjct: 241 IPVKTKIVDPKSGDEKPVTISVDDGIRPNTSVADLGKLKPVFKKDGSTTAGNSSQVSDGA 300
Query: 299 GAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLF 358
GAVLLMKRSVAM+KGLPILGVFR+FAAVGVDPAIMGVGPAVAIPAAVKSAGL+L DIDLF
Sbjct: 301 GAVLLMKRSVAMQKGLPILGVFRSFAAVGVDPAIMGVGPAVAIPAAVKSAGLELGDIDLF 360
Query: 359 EINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCR 418
EINEAFASQFVYCR KL LDPEKINVNGGA+AIGHPLG TGARCV TLLHEMKRRG+DCR
Sbjct: 361 EINEAFASQFVYCRKKLELDPEKINVNGGAMAIGHPLGVTGARCVVTLLHEMKRRGKDCR 420
Query: 419 FGVISMCIGTGMGAAAVFERGDCADELCNVRKVESNNFLSKD 460
FGV+SMCIGTGMGAAAVFERGD DEL N R V ++NFLSKD
Sbjct: 421 FGVVSMCIGTGMGAAAVFERGDSCDELSNTRTVGTHNFLSKD 462
|
Source: Rehmannia glutinosa Species: Rehmannia glutinosa Genus: Rehmannia Family: Order: Lamiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15225798|ref|NP_180873.1| 3-ketoacyl-CoA thiolase 2 [Arabidopsis thaliana] gi|73919871|sp|Q56WD9.2|THIK2_ARATH RecName: Full=3-ketoacyl-CoA thiolase 2, peroxisomal; AltName: Full=Acetyl-CoA acyltransferase 2; AltName: Full=Beta-ketothiolase 2; AltName: Full=Peroxisomal 3-oxoacyl-CoA thiolase 2; AltName: Full=Peroxisome defective protein 1; Flags: Precursor gi|11993853|gb|AAG42910.1|AF327529_1 putative 3-ketoacyl-CoA thiolase [Arabidopsis thaliana] gi|13194830|gb|AAK15577.1|AF349530_1 putative 3-ketoacyl-CoA thiolase [Arabidopsis thaliana] gi|2924779|gb|AAC04908.1| 3-ketoacyl-CoA thiolase [Arabidopsis thaliana] gi|2981616|dbj|BAA25248.1| 3-ketoacyl-CoA thiolase [Arabidopsis thaliana] gi|2981618|dbj|BAA25249.1| 3-ketoacyl-CoA thiolase [Arabidopsis thaliana] gi|15450669|gb|AAK96606.1| At2g33150/F25I18.11 [Arabidopsis thaliana] gi|17380614|gb|AAL36070.1| At2g33150/F25I18.11 [Arabidopsis thaliana] gi|21593136|gb|AAM65085.1| 3-ketoacyl-CoA thiolase [Arabidopsis thaliana] gi|330253697|gb|AEC08791.1| 3-ketoacyl-CoA thiolase 2 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 841 bits (2172), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/460 (89%), Positives = 436/460 (94%)
Query: 1 MEKAINRQQVLLEHLRPSNSSSHNYESILSASACAAGDSAAYHRTSVYGDDVVIVAAYRT 60
MEKAI RQ+VLLEHLRPS+SSSHNYE+ LSASAC AGDSAAY RTS+YGDDVVIVAA+RT
Sbjct: 1 MEKAIERQRVLLEHLRPSSSSSHNYEASLSASACLAGDSAAYQRTSLYGDDVVIVAAHRT 60
Query: 61 ALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAA 120
LCKSKRG FKDTYPDDLLAPVL+A+IEKTN++PSEVGDIVVGTVLAPGSQRASECRMAA
Sbjct: 61 PLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAA 120
Query: 121 FYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVN 180
FYAGFPETV VRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMT NPMAWEGSVN
Sbjct: 121 FYAGFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWEGSVN 180
Query: 181 PKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIP 240
P VK F QAQNCLLPMGVTSENVA RFGV+R+EQDQAAVDSHRKAAAATAAGKFKDEIIP
Sbjct: 181 PAVKKFAQAQNCLLPMGVTSENVAQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIP 240
Query: 241 VATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGA 300
V TK+VDPKTGDEKP+T+SVDDGIRP T+++ L KLKPVFKKDGTTTAGNSSQVSDGAGA
Sbjct: 241 VKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGKLKPVFKKDGTTTAGNSSQVSDGAGA 300
Query: 301 VLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEI 360
VLLMKRSVAM+KGLP+LGVFRTFAAVGVDPAIMG+GPAVAIPAAVK+AGL+LDDIDLFEI
Sbjct: 301 VLLMKRSVAMQKGLPVLGVFRTFAAVGVDPAIMGIGPAVAIPAAVKAAGLELDDIDLFEI 360
Query: 361 NEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFG 420
NEAFASQFVYCRNKLGLDPEKINVNGGA+AIGHPLG TGARCVATLLHEMKRRG+DCRFG
Sbjct: 361 NEAFASQFVYCRNKLGLDPEKINVNGGAMAIGHPLGATGARCVATLLHEMKRRGKDCRFG 420
Query: 421 VISMCIGTGMGAAAVFERGDCADELCNVRKVESNNFLSKD 460
V+SMCIGTGMGAAAVFERGD DEL N RKVE+ LSKD
Sbjct: 421 VVSMCIGTGMGAAAVFERGDGVDELRNARKVEAQGLLSKD 460
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224057614|ref|XP_002299284.1| predicted protein [Populus trichocarpa] gi|222846542|gb|EEE84089.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 838 bits (2166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/460 (87%), Positives = 435/460 (94%), Gaps = 2/460 (0%)
Query: 1 MEKAINRQQVLLEHLRPSNSSSHNYESILSASACAAGDSAAYHRTSVYGDDVVIVAAYRT 60
MEKAINRQ+VLLEHLRPS SSHN+ES LSASAC AGDSAAY RTS YGDDVVIVAAYRT
Sbjct: 1 MEKAINRQRVLLEHLRPS--SSHNFESTLSASACLAGDSAAYQRTSAYGDDVVIVAAYRT 58
Query: 61 ALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAA 120
CKSKRGGFKDT+ DDLLAPVLKA+IEKTN+DP EVGDIVVG+VLAPGSQRASECRMAA
Sbjct: 59 PQCKSKRGGFKDTHADDLLAPVLKALIEKTNLDPREVGDIVVGSVLAPGSQRASECRMAA 118
Query: 121 FYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVN 180
FYAGFPETVP+RTVNRQCSSGLQAVADVAA+IKAGFY+IGIGAGLESMT+N M+W+G VN
Sbjct: 119 FYAGFPETVPIRTVNRQCSSGLQAVADVAASIKAGFYEIGIGAGLESMTINQMSWDGDVN 178
Query: 181 PKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIP 240
PK+K F++AQ+CLLPMG+TSENVAHRFGVTR+EQDQAAVDSHRKAAAATA+G+FKDEIIP
Sbjct: 179 PKLKNFQKAQDCLLPMGITSENVAHRFGVTRQEQDQAAVDSHRKAAAATASGRFKDEIIP 238
Query: 241 VATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGA 300
VATKIVDPKTGDEKP+ +SVDDGIRP TSV+ L KLK VFKKDGTTTAGNSSQ+SDGAGA
Sbjct: 239 VATKIVDPKTGDEKPIVVSVDDGIRPETSVAGLGKLKTVFKKDGTTTAGNSSQISDGAGA 298
Query: 301 VLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEI 360
VLLMKRSVA++KGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVK+AGL+L+DIDLFEI
Sbjct: 299 VLLMKRSVAVQKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKAAGLELEDIDLFEI 358
Query: 361 NEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFG 420
NEAFASQFVYCR KL LDP+KINVNGGA+AIGHPLG TGARCVATLLHEMKRRGRDCRFG
Sbjct: 359 NEAFASQFVYCRKKLELDPQKINVNGGAMAIGHPLGATGARCVATLLHEMKRRGRDCRFG 418
Query: 421 VISMCIGTGMGAAAVFERGDCADELCNVRKVESNNFLSKD 460
V+SMCIGTGMGAAAVFERGD DELCN RKVESNN LSKD
Sbjct: 419 VVSMCIGTGMGAAAVFERGDGCDELCNARKVESNNLLSKD 458
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147866537|emb|CAN81585.1| hypothetical protein VITISV_023191 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 835 bits (2157), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/460 (88%), Positives = 436/460 (94%), Gaps = 1/460 (0%)
Query: 1 MEKAINRQQVLLEHLRPSNSSSHNYESILSASACAAGDSAAYHRTSVYGDDVVIVAAYRT 60
MEKAINRQ+VLL+HL PS+S++ + S LSAS C AGDSAAY RTSV+GDDVVIVAAYRT
Sbjct: 1 MEKAINRQRVLLQHLSPSSSAAEDESS-LSASVCVAGDSAAYQRTSVFGDDVVIVAAYRT 59
Query: 61 ALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAA 120
ALCKSKRGGFKDTYPDDLLAPVL+A+IEKTN++P+EVGDIVVGTVLAPGSQRASECRMAA
Sbjct: 60 ALCKSKRGGFKDTYPDDLLAPVLRALIEKTNLNPNEVGDIVVGTVLAPGSQRASECRMAA 119
Query: 121 FYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVN 180
FYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMT NPMAWEGS+N
Sbjct: 120 FYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTANPMAWEGSIN 179
Query: 181 PKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIP 240
PKVK F QAQ+CLLPMG+TSENVAHRFGVTR+EQDQAAV+SH++AAAATA GKFKDEIIP
Sbjct: 180 PKVKEFVQAQDCLLPMGITSENVAHRFGVTRQEQDQAAVESHKRAAAATATGKFKDEIIP 239
Query: 241 VATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGA 300
V+TKIVDPKTGDEKPVTISVDDGIRPN +S+LAKLKPVFKK+GTTTAGNSSQVSDGAGA
Sbjct: 240 VSTKIVDPKTGDEKPVTISVDDGIRPNAIMSDLAKLKPVFKKNGTTTAGNSSQVSDGAGA 299
Query: 301 VLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEI 360
VLLMKRSVAMRKGLPILGVFRTFAAVGVDPA+MG+GPAVAIPAAVKSAGL+LDDIDLFEI
Sbjct: 300 VLLMKRSVAMRKGLPILGVFRTFAAVGVDPAVMGIGPAVAIPAAVKSAGLELDDIDLFEI 359
Query: 361 NEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFG 420
NEAFASQFVYCR KL LDPEKINVNGGA+AIGHPLG TGARCV TLLHEMKRRG+DCRFG
Sbjct: 360 NEAFASQFVYCRKKLDLDPEKINVNGGAMAIGHPLGATGARCVGTLLHEMKRRGKDCRFG 419
Query: 421 VISMCIGTGMGAAAVFERGDCADELCNVRKVESNNFLSKD 460
V+SMCIGTGMGAAAVFERGDC DEL N R E+NN LSKD
Sbjct: 420 VVSMCIGTGMGAAAVFERGDCVDELRNARTAENNNLLSKD 459
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|7433647|pir||S72532 acetyl-CoA C-acyltransferase (EC 2.3.1.16) precursor - cucurbit gi|1694621|dbj|BAA11117.1| 3-ketoacyl-CoA thiolase [Cucurbita cv. Kurokawa Amakuri] | Back alignment and taxonomy information |
|---|
Score = 835 bits (2157), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/460 (88%), Positives = 438/460 (95%), Gaps = 1/460 (0%)
Query: 1 MEKAINRQQVLLEHLRPSNSSSHNYESILSASACAAGDSAAYHRTSVYGDDVVIVAAYRT 60
MEKAINRQ +LL HLRPS+S+ + S LSAS CAAGDSA+Y RTSV+GDDVVIVAAYRT
Sbjct: 1 MEKAINRQSILLHHLRPSSSAYSHESS-LSASVCAAGDSASYQRTSVFGDDVVIVAAYRT 59
Query: 61 ALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAA 120
ALCKSKRGGFKDTYPDDLLAPVLKA+IEKTN++PSEVGDIVVG+VLAPGSQRASECRMA
Sbjct: 60 ALCKSKRGGFKDTYPDDLLAPVLKALIEKTNLNPSEVGDIVVGSVLAPGSQRASECRMAT 119
Query: 121 FYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVN 180
FY GFPETVPVRTVNRQCSSGLQAVADVAAAI+AGFYDIGIGAGLESMTVNPMAW+GSVN
Sbjct: 120 FYPGFPETVPVRTVNRQCSSGLQAVADVAAAIRAGFYDIGIGAGLESMTVNPMAWDGSVN 179
Query: 181 PKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIP 240
P+VK+ E AQNCLLPMGVTSENVA RFGV+R+EQD+AAV+SHRKAAAATA+GKFKDEIIP
Sbjct: 180 PRVKSMENAQNCLLPMGVTSENVAQRFGVSREEQDKAAVESHRKAAAATASGKFKDEIIP 239
Query: 241 VATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGA 300
V+TKI+DPKTG+E+PVTISVDDGIRPNT+ ++L KLKPVFKKDGTTTAGNSSQVSDGAGA
Sbjct: 240 VSTKIIDPKTGEERPVTISVDDGIRPNTTQADLGKLKPVFKKDGTTTAGNSSQVSDGAGA 299
Query: 301 VLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEI 360
VLLMKRSVAM+KGLPILGVFRTF AVGVDPAIMGVGPAVAIPAAVK+AGL+L+DIDLFEI
Sbjct: 300 VLLMKRSVAMQKGLPILGVFRTFTAVGVDPAIMGVGPAVAIPAAVKAAGLELNDIDLFEI 359
Query: 361 NEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFG 420
NEAFASQFVYCRNKLGLDPEKINVNGGA+AIGHPLGTTGARCVATLLHEMKRRG+DCRFG
Sbjct: 360 NEAFASQFVYCRNKLGLDPEKINVNGGAIAIGHPLGTTGARCVATLLHEMKRRGKDCRFG 419
Query: 421 VISMCIGTGMGAAAVFERGDCADELCNVRKVESNNFLSKD 460
VISMCIGTGMGAAAVFERGDC DELCN +KVE N LSKD
Sbjct: 420 VISMCIGTGMGAAAVFERGDCVDELCNAKKVEGINLLSKD 459
|
Source: Cucurbita cv. Kurokawa Amakuri Species: Cucurbita hybrid cultivar Genus: Cucurbita Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297826765|ref|XP_002881265.1| hypothetical protein ARALYDRAFT_482251 [Arabidopsis lyrata subsp. lyrata] gi|297327104|gb|EFH57524.1| hypothetical protein ARALYDRAFT_482251 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 835 bits (2157), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/460 (88%), Positives = 436/460 (94%)
Query: 1 MEKAINRQQVLLEHLRPSNSSSHNYESILSASACAAGDSAAYHRTSVYGDDVVIVAAYRT 60
MEKAI RQ+VLLEHLRPS+SSSHN+E+ LSASAC AGDSAAY RTS+YGDDVVIVAA+RT
Sbjct: 1 MEKAIERQRVLLEHLRPSSSSSHNFEASLSASACLAGDSAAYQRTSLYGDDVVIVAAHRT 60
Query: 61 ALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAA 120
LCKSKRG FKDTYPDDLLAPVL+A+IEKTN++PSEVGDIVVGTVLAPGSQRASECRM+A
Sbjct: 61 PLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMSA 120
Query: 121 FYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVN 180
FYAGFPETV VRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMT NPMAWEGSVN
Sbjct: 121 FYAGFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWEGSVN 180
Query: 181 PKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIP 240
P VK F QAQNCLLPMGVTSENVA RFGV+R+EQDQAAVDSHRKAAAATAAGKFKDEIIP
Sbjct: 181 PAVKKFAQAQNCLLPMGVTSENVAQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIP 240
Query: 241 VATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGA 300
V TK+VDPKTGDEKP+T+SVDDGIRP T+++ L KLKPVFKKDGTTTAGNSSQVSDGAGA
Sbjct: 241 VKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGKLKPVFKKDGTTTAGNSSQVSDGAGA 300
Query: 301 VLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEI 360
VLLMKRSVAM+KGLP+LGVFRTFAAVGVDPAIMG+GPAVAIPAAVK+AGL+LDDIDLFEI
Sbjct: 301 VLLMKRSVAMQKGLPVLGVFRTFAAVGVDPAIMGIGPAVAIPAAVKAAGLELDDIDLFEI 360
Query: 361 NEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFG 420
NEAFASQFVYCRNKLGL+PEKINVNGGA+AIGHPLG TGARCVATLLHEMKRRG+DCRFG
Sbjct: 361 NEAFASQFVYCRNKLGLNPEKINVNGGAMAIGHPLGATGARCVATLLHEMKRRGKDCRFG 420
Query: 421 VISMCIGTGMGAAAVFERGDCADELCNVRKVESNNFLSKD 460
V+SMCIGTGMGAAAVFERGD DEL N +KVE+ LSKD
Sbjct: 421 VVSMCIGTGMGAAAVFERGDGVDELRNAKKVEAQGLLSKD 460
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225433424|ref|XP_002285653.1| PREDICTED: 3-ketoacyl-CoA thiolase 2, peroxisomal isoform 1 [Vitis vinifera] gi|297741919|emb|CBI33354.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 832 bits (2149), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/460 (87%), Positives = 436/460 (94%), Gaps = 1/460 (0%)
Query: 1 MEKAINRQQVLLEHLRPSNSSSHNYESILSASACAAGDSAAYHRTSVYGDDVVIVAAYRT 60
MEKAINRQ+VLL+HL PS+S++ + S LSAS C AGDSAAY RTSV+GDDVVIVAAYRT
Sbjct: 1 MEKAINRQRVLLQHLSPSSSAAEDESS-LSASVCVAGDSAAYQRTSVFGDDVVIVAAYRT 59
Query: 61 ALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAA 120
ALCKSKRGGFKDTYPDDLLAPVL+A++EKTN++P+EVGDIVVGTVLAPGSQRASECRMAA
Sbjct: 60 ALCKSKRGGFKDTYPDDLLAPVLRALLEKTNLNPNEVGDIVVGTVLAPGSQRASECRMAA 119
Query: 121 FYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVN 180
FYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMT NPMAWEGS+N
Sbjct: 120 FYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTANPMAWEGSIN 179
Query: 181 PKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIP 240
PKVK F QAQ+CLLPMG+TSENVAHRFGVTR+EQDQAAV+SH++AAAATA GKFKDEIIP
Sbjct: 180 PKVKEFVQAQDCLLPMGITSENVAHRFGVTRQEQDQAAVESHKRAAAATATGKFKDEIIP 239
Query: 241 VATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGA 300
V+TKIVDPKTGDEK VTISVDDGIRPN ++S+LAKLKPVFKK+GTTTAGNSSQVSDGAGA
Sbjct: 240 VSTKIVDPKTGDEKLVTISVDDGIRPNATMSDLAKLKPVFKKNGTTTAGNSSQVSDGAGA 299
Query: 301 VLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEI 360
VLLMKRSVAMRKGLPILGVFRTFAAVGVDPA+MG+GPAVAIPAAVKSAGL+LDDIDLFEI
Sbjct: 300 VLLMKRSVAMRKGLPILGVFRTFAAVGVDPAVMGIGPAVAIPAAVKSAGLELDDIDLFEI 359
Query: 361 NEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFG 420
NEAFASQFVYCR KL LDPEKINVNGGA+AIGHPLG TGARCV TLLHEMKRRG+DCRFG
Sbjct: 360 NEAFASQFVYCRKKLDLDPEKINVNGGAMAIGHPLGATGARCVGTLLHEMKRRGKDCRFG 419
Query: 421 VISMCIGTGMGAAAVFERGDCADELCNVRKVESNNFLSKD 460
V+SMCIGTGMGAAAVFERGDC DEL N R E+NN LSKD
Sbjct: 420 VVSMCIGTGMGAAAVFERGDCVDELRNARTAENNNLLSKD 459
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449442365|ref|XP_004138952.1| PREDICTED: 3-ketoacyl-CoA thiolase 2, peroxisomal-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 828 bits (2139), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/462 (87%), Positives = 442/462 (95%), Gaps = 1/462 (0%)
Query: 1 MEKAINRQQVLLEHLRPSNSSSHNYESILSASACAAGDSAAYHRTSVYGDDVVIVAAYRT 60
MEKAINRQ+VLL HLR +SS +++S LSASAC AGDSAAY R+SV+GDDVVIVAAYRT
Sbjct: 1 MEKAINRQKVLLHHLR-PSSSLPSHDSSLSASACLAGDSAAYQRSSVFGDDVVIVAAYRT 59
Query: 61 ALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAA 120
ALCKSKRGGFKDT+PDDLLAPVLKA+IEKTN++PSEVGDI+VG+VL PGSQRASECRMAA
Sbjct: 60 ALCKSKRGGFKDTHPDDLLAPVLKALIEKTNLNPSEVGDIIVGSVLGPGSQRASECRMAA 119
Query: 121 FYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVN 180
FYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMT NPMAWEGSVN
Sbjct: 120 FYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTANPMAWEGSVN 179
Query: 181 PKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIP 240
PKVK FEQA+NCLLPMG+TSENVAHRFGVTR++QDQAAV+SHRKAAAATA+G+FKDEIIP
Sbjct: 180 PKVKMFEQAKNCLLPMGITSENVAHRFGVTREQQDQAAVESHRKAAAATASGRFKDEIIP 239
Query: 241 VATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGA 300
V+TK+VDPKTG+EK T+SVDDGIRPN S+++LAKLKPVFKKDG+TTAGN+SQVSDGAGA
Sbjct: 240 VSTKLVDPKTGEEKSFTVSVDDGIRPNASLADLAKLKPVFKKDGSTTAGNASQVSDGAGA 299
Query: 301 VLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEI 360
VLLMKRSVA++KGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVK+AGL+LDDIDLFEI
Sbjct: 300 VLLMKRSVAIKKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKAAGLELDDIDLFEI 359
Query: 361 NEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFG 420
NEAFASQFVYCRNKL LDPEKINVNGGA+AIGHPLG TGARCVATLLHEMKRRG+DCRFG
Sbjct: 360 NEAFASQFVYCRNKLELDPEKINVNGGAMAIGHPLGATGARCVATLLHEMKRRGKDCRFG 419
Query: 421 VISMCIGTGMGAAAVFERGDCADELCNVRKVESNNFLSKDVL 462
VISMCIGTGMGAAAVFERGD ADELCN RKV+++N LSKD L
Sbjct: 420 VISMCIGTGMGAAAVFERGDVADELCNARKVDNHNLLSKDCL 461
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 462 | ||||||
| TAIR|locus:2046565 | 462 | PKT3 "peroxisomal 3-ketoacyl-C | 0.995 | 0.995 | 0.804 | 1.1e-197 | |
| TAIR|locus:2197778 | 443 | PKT4 "peroxisomal 3-ketoacyl-C | 0.958 | 1.0 | 0.756 | 3.8e-181 | |
| TAIR|locus:2156514 | 457 | KAT5 "3-KETO-ACYL-COENZYME A T | 0.961 | 0.971 | 0.652 | 3.8e-156 | |
| DICTYBASE|DDB_G0274339 | 416 | DDB_G0274339 "acetyl-CoA C-acy | 0.822 | 0.913 | 0.555 | 4.4e-107 | |
| UNIPROTKB|F1RRB7 | 426 | ACAA1 "Uncharacterized protein | 0.833 | 0.903 | 0.543 | 1.2e-106 | |
| MGI|MGI:2148491 | 424 | Acaa1a "acetyl-Coenzyme A acyl | 0.904 | 0.985 | 0.510 | 1.5e-106 | |
| UNIPROTKB|P09110 | 424 | ACAA1 "3-ketoacyl-CoA thiolase | 0.831 | 0.905 | 0.542 | 4e-106 | |
| RGD|1562373 | 424 | Acaa1b "acetyl-Coenzyme A acyl | 0.831 | 0.905 | 0.545 | 8.3e-106 | |
| ZFIN|ZDB-GENE-040704-48 | 418 | acaa1 "acetyl-Coenzyme A acylt | 0.844 | 0.933 | 0.534 | 1.1e-105 | |
| MGI|MGI:3605455 | 424 | Acaa1b "acetyl-Coenzyme A acyl | 0.831 | 0.905 | 0.545 | 1.4e-105 |
| TAIR|locus:2046565 PKT3 "peroxisomal 3-ketoacyl-CoA thiolase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1914 (678.8 bits), Expect = 1.1e-197, P = 1.1e-197
Identities = 370/460 (80%), Positives = 395/460 (85%)
Query: 1 MEKAINRQQVLLEHLRPSNSSSHNYESILXXXXXXXXXXXXYHRTSVYGDDVVIVAAYRT 60
MEKAI RQ+VLLEHLRPS+SSSHNYE+ L Y RTS+YGDDVVIVAA+RT
Sbjct: 1 MEKAIERQRVLLEHLRPSSSSSHNYEASLSASACLAGDSAAYQRTSLYGDDVVIVAAHRT 60
Query: 61 ALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAA 120
LCKSKRG FKDTYPDDLLAPVL+A+IEKTN++PSEVGDIVVGTVLAPGSQRASECRMAA
Sbjct: 61 PLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAA 120
Query: 121 FYAGFPETVPVRTVNRQCSSGLQXXXXXXXXXXXGFYDIGIGAGLESMTVNPMAWEGSVN 180
FYAGFPETV VRTVNRQCSSGLQ GFYDIGIGAGLESMT NPMAWEGSVN
Sbjct: 121 FYAGFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWEGSVN 180
Query: 181 PKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKXXXXXXXGKFKDEIIP 240
P VK F QAQNCLLPMGVTSENVA RFGV+R+EQDQAAVDSHRK GKFKDEIIP
Sbjct: 181 PAVKKFAQAQNCLLPMGVTSENVAQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIP 240
Query: 241 VATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGA 300
V TK+VDPKTGDEKP+T+SVDDGIRP T+++ L KLKPVFKKDGTTTAGNSSQVSDGAGA
Sbjct: 241 VKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGKLKPVFKKDGTTTAGNSSQVSDGAGA 300
Query: 301 VLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMXXXXXXXXXXXXKSAGLQLDDIDLFEI 360
VLLMKRSVAM+KGLP+LGVFRTFAAVGVDPAIM K+AGL+LDDIDLFEI
Sbjct: 301 VLLMKRSVAMQKGLPVLGVFRTFAAVGVDPAIMGIGPAVAIPAAVKAAGLELDDIDLFEI 360
Query: 361 NEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFG 420
NEAFASQFVYCRNKLGLDPEKINVNGGA+AIGHPLG TGARCVATLLHEMKRRG+DCRFG
Sbjct: 361 NEAFASQFVYCRNKLGLDPEKINVNGGAMAIGHPLGATGARCVATLLHEMKRRGKDCRFG 420
Query: 421 VISMCIGTGMGAAAVFERGDCADELCNVRKVESNNFLSKD 460
V+SMCIGTGMGAAAVFERGD DEL N RKVE+ LSKD
Sbjct: 421 VVSMCIGTGMGAAAVFERGDGVDELRNARKVEAQGLLSKD 460
|
|
| TAIR|locus:2197778 PKT4 "peroxisomal 3-ketoacyl-CoA thiolase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1758 (623.9 bits), Expect = 3.8e-181, P = 3.8e-181
Identities = 341/451 (75%), Positives = 377/451 (83%)
Query: 1 MEKAINRQQVLLEHLRPSNSSSHNYESILXXXXXXXXXXXXYHRTSVYGDDVVIVAAYRT 60
MEKA RQ++LL HL+PS+SS ++ L Y YGDDVVIVAA RT
Sbjct: 1 MEKATERQRILLRHLQPSSSS----DASLSASACLSKDSAAYQ----YGDDVVIVAAQRT 52
Query: 61 ALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAA 120
ALCK+KRG FKDT+PD+LLA VL+A+IEKTNV+PSEVGDIVVGTVL PGSQRASECRMAA
Sbjct: 53 ALCKAKRGSFKDTFPDELLASVLRALIEKTNVNPSEVGDIVVGTVLGPGSQRASECRMAA 112
Query: 121 FYAGFPETVPVRTVNRQCSSGLQXXXXXXXXXXXGFYDIGIGAGLESMTVNPMAWEGSVN 180
FYAGFPETVP+RTVNRQCSSGLQ GFYDIGIGAGLESMT NP W+GSVN
Sbjct: 113 FYAGFPETVPIRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPRGWKGSVN 172
Query: 181 PKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKXXXXXXXGKFKDEIIP 240
P VK FEQA NCLLPMG+TSENVAHRF V+R+EQDQAAVDSHRK GKFKDEI P
Sbjct: 173 PNVKKFEQAHNCLLPMGITSENVAHRFNVSREEQDQAAVDSHRKAASATASGKFKDEITP 232
Query: 241 VATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGA 300
V TKIVDPKTGDEKP+T+SVDDGIRPNT++S LAKLKPVFK+DGTTTAGNSSQ+SDGAGA
Sbjct: 233 VKTKIVDPKTGDEKPITVSVDDGIRPNTTLSGLAKLKPVFKEDGTTTAGNSSQLSDGAGA 292
Query: 301 VLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMXXXXXXXXXXXXKSAGLQLDDIDLFEI 360
VLLM+R+VAM+KGLPILGVFRTF+AVGVDPAIM K+AGL+L+D+DLFEI
Sbjct: 293 VLLMRRNVAMQKGLPILGVFRTFSAVGVDPAIMGVGPAVAIPAAVKAAGLELNDVDLFEI 352
Query: 361 NEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFG 420
NEAFASQFVYCRNKLGLD EKINVNGGA+AIGHPLG TGARCVATLLHEMKRRG+DCRFG
Sbjct: 353 NEAFASQFVYCRNKLGLDAEKINVNGGAIAIGHPLGATGARCVATLLHEMKRRGKDCRFG 412
Query: 421 VISMCIGTGMGAAAVFERGDCADELCNVRKV 451
V+SMCIG+GMGAAAVFERG DELC+VRKV
Sbjct: 413 VVSMCIGSGMGAAAVFERGGGVDELCDVRKV 443
|
|
| TAIR|locus:2156514 KAT5 "3-KETO-ACYL-COENZYME A THIOLASE 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1522 (540.8 bits), Expect = 3.8e-156, P = 3.8e-156
Identities = 297/455 (65%), Positives = 360/455 (79%)
Query: 1 MEKAINRQQVLLEHLRP---SNSSSHNYESILXXXXXXXXXXXXYHRTSVYGDDVVIVAA 57
ME+A+ RQ++LL HL P SNSS + S+L + +GDD+VIVAA
Sbjct: 1 MERAMERQKILLRHLNPVSSSNSSLKHEPSLLSPVNCVSEVSPM----AAFGDDIVIVAA 56
Query: 58 YRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECR 117
YRTA+CK++RGGFKDT PDDLLA VLKAV+E+T++DPSEVGDIVVGTV+APGSQRA ECR
Sbjct: 57 YRTAICKARRGGFKDTLPDDLLASVLKAVVERTSLDPSEVGDIVVGTVIAPGSQRAMECR 116
Query: 118 MAAFYAGFPETVPVRTVNRQCSSGLQXXXXXXXXXXXGFYDIGIGAGLESMTVNPM---A 174
+AA++AGFP++VPVRTVNRQCSSGLQ G+YDIGIGAG+ESM+ + +
Sbjct: 117 VAAYFAGFPDSVPVRTVNRQCSSGLQAVADVAASIRAGYYDIGIGAGVESMSTDHIPGGG 176
Query: 175 WEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKXXXXXXXGKF 234
+ GS NP+ + F +A++CLLPMG+TSENVA RFGVTR+EQD AAV+SH++ GK
Sbjct: 177 FHGS-NPRAQDFPKARDCLLPMGITSENVAERFGVTREEQDMAAVESHKRAAAAIASGKL 235
Query: 235 KDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQV 294
KDEIIPVATKIVDP+T EK + +SVDDG+RPN+++++LAKLK VFK++G+TTAGN+SQ+
Sbjct: 236 KDEIIPVATKIVDPETKAEKAIVVSVDDGVRPNSNMADLAKLKTVFKQNGSTTAGNASQI 295
Query: 295 SDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMXXXXXXXXXXXXKSAGLQLDD 354
SDGAGAVLLMKRS+AM+KGLPILGVFR+FA GV+P++M K AGL + D
Sbjct: 296 SDGAGAVLLMKRSLAMKKGLPILGVFRSFAVTGVEPSVMGIGPAVAIPAATKLAGLNVSD 355
Query: 355 IDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG 414
IDLFEINEAFASQ+VY KL LD EK+NVNGGA+AIGHPLG TGARCVATLLHEMKRRG
Sbjct: 356 IDLFEINEAFASQYVYSCKKLELDMEKVNVNGGAIAIGHPLGATGARCVATLLHEMKRRG 415
Query: 415 RDCRFGVISMCIGTGMGAAAVFERGDCADELCNVR 449
+DCRFGVISMCIGTGMGAAAVFERGD D L N R
Sbjct: 416 KDCRFGVISMCIGTGMGAAAVFERGDSVDNLSNAR 450
|
|
| DICTYBASE|DDB_G0274339 DDB_G0274339 "acetyl-CoA C-acyltransferase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 1059 (377.8 bits), Expect = 4.4e-107, P = 4.4e-107
Identities = 215/387 (55%), Positives = 264/387 (68%)
Query: 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAP 108
GDD+VIVA +RTA+CK+KRG FK+T PDDLLAPV+K +I+ T +DP +GD+V+G VL
Sbjct: 32 GDDIVIVAPFRTAICKAKRGAFKETAPDDLLAPVIKHIIKVTKLDPKLIGDVVMGAVLPR 91
Query: 109 GSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQXXXXXXXXXXXGFYDIGIGAGLESM 168
SQ A+E R+A AG P+ VP TVNRQCSSGLQ GFYDIG+ G+ESM
Sbjct: 92 SSQGATEVRVATLLAGLPKEVPCYTVNRQCSSGLQAIANCAAAVKAGFYDIGLAGGVESM 151
Query: 169 TVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKXXXX 228
++NPMAW+G N + C MG TSENVA RFGVTRK+QD+ +V+SH+K
Sbjct: 152 SLNPMAWDGGFNEVAQEDPIISGCYNTMGQTSENVAERFGVTRKDQDEFSVNSHKKAGAA 211
Query: 229 XXXGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTA 288
GKF DEI+PV K D KT + + D+GIR T+V++LAKLKP FK+ GTTTA
Sbjct: 212 QKAGKFDDEIVPVTVKTEDGKT-----IVVDKDEGIREKTTVADLAKLKPAFKEGGTTTA 266
Query: 289 GNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMXXXXXXXXXXXXKSA 348
GNSSQ+SDGA A L+MKRS A R GL + VF FAAVGV+P+IM K A
Sbjct: 267 GNSSQMSDGAAACLVMKRSTAERLGLKVELVFVAFAAVGVEPSIMGIGPAVAIPAALKQA 326
Query: 349 GLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLH 408
GL DID+FEINEAFASQ Y LGLD K+N NG +A+GHPLG TGAR +AT+
Sbjct: 327 GLTTKDIDVFEINEAFASQAFYSCKVLGLDMNKVNPNGSGIALGHPLGATGARQMATISR 386
Query: 409 EMKRRGRDCRFGVISMCIGTGMGAAAV 435
E+ RR ++GVISMCIGTG+GAAAV
Sbjct: 387 ELHRRKG--KYGVISMCIGTGLGAAAV 411
|
|
| UNIPROTKB|F1RRB7 ACAA1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 1055 (376.4 bits), Expect = 1.2e-106, P = 1.2e-106
Identities = 211/388 (54%), Positives = 277/388 (71%)
Query: 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPG 109
+D+V+V RTA+ +S RGGFKDT PD+LL+ V+ AV++ + P+++GDI VG VL PG
Sbjct: 38 EDIVVVHGRRTAIGRSGRGGFKDTTPDELLSAVMTAVLQDVKLSPAQLGDICVGNVLQPG 97
Query: 110 SQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQXXXXXXXXXXXGFYDIGIGAGLESMT 169
+ A R+A F + PETVP+ TVNRQCSSGLQ G YDIG+ G+ESMT
Sbjct: 98 AG-AVMARIAQFLSDIPETVPLSTVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMT 156
Query: 170 VNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKXXXXX 229
+ G+++ ++ E+A++CL+PMG+TSENVA RFG++R++QD A+ S +K
Sbjct: 157 LGDRGNPGNISSRLVEKEKARDCLIPMGITSENVAKRFGISREKQDTFALASQQKAARAQ 216
Query: 230 XXGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAG 289
G F+ EI+PV T + D K G+EK +T++ D+GIRPNT++ LAKLKP FK+ G+TTAG
Sbjct: 217 SKGCFQAEIVPVTTTVYDDK-GNEKSITVAQDEGIRPNTTMEGLAKLKPAFKQGGSTTAG 275
Query: 290 NSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMXXXXXXXXXXXXKSAG 349
NSSQVSDGA A+LL +RS A GLPILG+ R++A VGV P IM + AG
Sbjct: 276 NSSQVSDGAAALLLARRSKAKELGLPILGILRSYAVVGVPPDIMGIGPAYAIPVALEKAG 335
Query: 350 LQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHE 409
L +DDID+FEINEAFASQ +YC KL L PEK+N GGA+A+GHPLG TGAR V TLL+E
Sbjct: 336 LTVDDIDIFEINEAFASQALYCVEKLKLPPEKVNPLGGAVALGHPLGCTGARQVITLLNE 395
Query: 410 MKRRGRDCRFGVISMCIGTGMGAAAVFE 437
+KRRG+ +GV+SMCIGTGMGAAAVFE
Sbjct: 396 LKRRGKRA-YGVVSMCIGTGMGAAAVFE 422
|
|
| MGI|MGI:2148491 Acaa1a "acetyl-Coenzyme A acyltransferase 1A" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 1054 (376.1 bits), Expect = 1.5e-106, P = 1.5e-106
Identities = 222/435 (51%), Positives = 294/435 (67%)
Query: 5 INRQQVLLEHL--RPSNSSSHNYESILXXXXXXXXXXXXYHRTSVYGDDVVIVAAYRTAL 62
++R QV+L HL RP +SS+ + + S DVV+V RT +
Sbjct: 1 MHRLQVVLGHLAGRPESSSA----------LQAAPCSARFPQASA--SDVVVVHGRRTPI 48
Query: 63 CKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFY 122
++ RGGFK+T PD+LL+ VL AV++ + P ++GDI VG VL PG+ A R+A F
Sbjct: 49 GRASRGGFKNTTPDELLSAVLTAVLQDVRLKPEQLGDISVGNVLEPGAG-AVMARIAQFL 107
Query: 123 AGFPETVPVRTVNRQCSSGLQXXXXXXXXXXXGFYDIGIGAGLESMTVNPMAWEGSVNPK 182
+G PETVP+ TVNRQCSSGLQ G YDIG+ G+ESM+++ M G+++ +
Sbjct: 108 SGIPETVPLSTVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMSLSGMGNPGNISSR 167
Query: 183 VKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKXXXXXXXGKFKDEIIPVA 242
+ E+A++CL PMG+TSENVA RFG++R++QD A+ S +K G F+ EI+PV
Sbjct: 168 LLESEKARDCLTPMGMTSENVAERFGISRQKQDDFALASQQKAASAQSRGCFRAEIVPVT 227
Query: 243 TKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVL 302
T ++D K GD+K +T+S D+G+RP+T++ LAKLKP FK G+TTAGNSSQVSDGA AVL
Sbjct: 228 TTVLDDK-GDKKTITVSQDEGVRPSTTMQGLAKLKPAFKDGGSTTAGNSSQVSDGAAAVL 286
Query: 303 LMKRSVAMRKGLPILGVFRTFAAVGVDPAIMXXXXXXXXXXXXKSAGLQLDDIDLFEINE 362
L +RS A GLPILGV R++A VGV P +M + AGL ++DID+FEINE
Sbjct: 287 LARRSKAEELGLPILGVLRSYAVVGVPPDVMGIGPAYAIPAALQKAGLTVNDIDIFEINE 346
Query: 363 AFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVI 422
AFASQ VYC KLG+ EK+N GGA+A+GHPLG TGAR V TLL+E+KRRGR +GV+
Sbjct: 347 AFASQAVYCVEKLGIPAEKVNPLGGAIALGHPLGCTGARQVVTLLNELKRRGRRA-YGVV 405
Query: 423 SMCIGTGMGAAAVFE 437
SMCIGTGMGAAAVFE
Sbjct: 406 SMCIGTGMGAAAVFE 420
|
|
| UNIPROTKB|P09110 ACAA1 "3-ketoacyl-CoA thiolase, peroxisomal" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1050 (374.7 bits), Expect = 4.0e-106, P = 4.0e-106
Identities = 210/387 (54%), Positives = 274/387 (70%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS 110
DVV+V RTA+C++ RGGFKDT PD+LL+ V+ AV++ N+ P ++GDI VG VL PG+
Sbjct: 37 DVVVVHGRRTAICRAGRGGFKDTTPDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPGA 96
Query: 111 QRASECRMAAFYAGFPETVPVRTVNRQCSSGLQXXXXXXXXXXXGFYDIGIGAGLESMTV 170
A R+A F + PETVP+ TVNRQCSSGLQ G YDIG+ G+ESM++
Sbjct: 97 G-AIMARIAQFLSDIPETVPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSL 155
Query: 171 NPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKXXXXXX 230
G++ ++ E+A++CL+PMG+TSENVA RFG++R++QD A+ S +K
Sbjct: 156 ADRGNPGNITSRLMEKEKARDCLIPMGITSENVAERFGISREKQDTFALASQQKAARAQS 215
Query: 231 XGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGN 290
G F+ EI+PV T + D K G ++ +T++ D+GIRP+T++ LAKLKP FKKDG+TTAGN
Sbjct: 216 KGCFQAEIVPVTTTVHDDK-GTKRSITVTQDEGIRPSTTMEGLAKLKPAFKKDGSTTAGN 274
Query: 291 SSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMXXXXXXXXXXXXKSAGL 350
SSQVSDGA A+LL +RS A GLPILGV R++A VGV P IM + AGL
Sbjct: 275 SSQVSDGAAAILLARRSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAYAIPVALQKAGL 334
Query: 351 QLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEM 410
+ D+D+FEINEAFASQ YC KL L PEK+N GGA+A+GHPLG TGAR V TLL+E+
Sbjct: 335 TVSDVDIFEINEAFASQAAYCVEKLRLPPEKVNPLGGAVALGHPLGCTGARQVITLLNEL 394
Query: 411 KRRGRDCRFGVISMCIGTGMGAAAVFE 437
KRRG+ +GV+SMCIGTGMGAAAVFE
Sbjct: 395 KRRGKRA-YGVVSMCIGTGMGAAAVFE 420
|
|
| RGD|1562373 Acaa1b "acetyl-Coenzyme A acyltransferase 1B" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1047 (373.6 bits), Expect = 8.3e-106, P = 8.3e-106
Identities = 211/387 (54%), Positives = 274/387 (70%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS 110
DVV+V RT + ++ RGGFKDT PD+LL+ VL AV++ + P +GDI VG VL PG+
Sbjct: 37 DVVVVHGRRTPIGRAGRGGFKDTTPDELLSAVLTAVLQDVKLKPECLGDISVGNVLQPGA 96
Query: 111 QRASECRMAAFYAGFPETVPVRTVNRQCSSGLQXXXXXXXXXXXGFYDIGIGAGLESMTV 170
A+ R+A F +G PETVP+ VNRQCSSGLQ G YDIG+ G+ESMT+
Sbjct: 97 G-AAMARIAQFLSGIPETVPLSAVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMTL 155
Query: 171 NPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKXXXXXX 230
+ G+++ ++ E+A++CL+PMG+TSENVA RFG++R++QD A+ S +K
Sbjct: 156 SERGNPGNISSRLLENEKARDCLIPMGITSENVAERFGISRQKQDAFALASQQKAASAQS 215
Query: 231 XGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGN 290
G F+ EI+PV T ++D K GD K +T+S D+G+RP+T++ LAKLKP FK G+TTAGN
Sbjct: 216 KGCFRAEIVPVTTTVLDDK-GDRKTITVSQDEGVRPSTTMEGLAKLKPAFKDGGSTTAGN 274
Query: 291 SSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMXXXXXXXXXXXXKSAGL 350
SSQVSDGA AVLL +RS A GLPILGV R++A VGV P IM + AGL
Sbjct: 275 SSQVSDGAAAVLLARRSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAYAIPAALQKAGL 334
Query: 351 QLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEM 410
++DID+FEINEAFASQ +YC KLG+ EK+N GGA+A+GHPLG TGAR V TLL+E+
Sbjct: 335 TVNDIDIFEINEAFASQALYCVEKLGIPAEKVNPLGGAIALGHPLGCTGARQVVTLLNEL 394
Query: 411 KRRGRDCRFGVISMCIGTGMGAAAVFE 437
KRRGR +GV+SMCIGTGMGAAAVFE
Sbjct: 395 KRRGRRA-YGVVSMCIGTGMGAAAVFE 420
|
|
| ZFIN|ZDB-GENE-040704-48 acaa1 "acetyl-Coenzyme A acyltransferase 1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 1046 (373.3 bits), Expect = 1.1e-105, P = 1.1e-105
Identities = 210/393 (53%), Positives = 274/393 (69%)
Query: 45 TSVYGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGT 104
T+ +D+V+V RTA+ ++KRG FKDT PD+LL+ V+ AVI+ + PS +GD+ VG
Sbjct: 25 TAANPNDIVVVHGLRTAIGRAKRGSFKDTTPDELLSAVMSAVIKDVGLKPSLLGDVCVGN 84
Query: 105 VLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQXXXXXXXXXXXGFYDIGIGAG 164
VL PG+ A R+A F++GFPE+VPV TVNRQCSSGLQ G YD+G+ G
Sbjct: 85 VLQPGAG-ALMARVAHFFSGFPESVPVYTVNRQCSSGLQALFNIAGGIRGGSYDLGLACG 143
Query: 165 LESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRK 224
+ESM++ G ++P++ E+A++C++PMG+TSENVA RFG+TR++QD+ A+ S +K
Sbjct: 144 VESMSLRSPNNPGDISPRLMDNEKARDCIIPMGITSENVAERFGITREKQDRFALSSQQK 203
Query: 225 XXXXXXXGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDG 284
G F EI PV TK V+ + G E+ +T++ DDGIRP T++ LAKL+P FK G
Sbjct: 204 AAMAQKNGIFDQEITPVTTKFVE-ENGTERTITVTKDDGIRPGTTLEGLAKLRPAFKDTG 262
Query: 285 TTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMXXXXXXXXXXX 344
+TTAGN+SQVSDGA AVL+ +RS + GLP+ GV R A VGV P +M
Sbjct: 263 STTAGNASQVSDGAAAVLIGRRSAVEKLGLPVFGVLRASAVVGVPPDVMGIGPAYAIPEA 322
Query: 345 XKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVA 404
K AGL +DDID+FEINEAFASQ VYC KLG+ EK+N NGGA+A GHPLG TGAR V
Sbjct: 323 LKLAGLTVDDIDVFEINEAFASQAVYCVEKLGIPMEKVNPNGGAIAFGHPLGCTGARQVV 382
Query: 405 TLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 437
TLL+E+KRR R FGV+SMCIGTGMGAAAVFE
Sbjct: 383 TLLNELKRR-RKRGFGVVSMCIGTGMGAAAVFE 414
|
|
| MGI|MGI:3605455 Acaa1b "acetyl-Coenzyme A acyltransferase 1B" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 1045 (372.9 bits), Expect = 1.4e-105, P = 1.4e-105
Identities = 211/387 (54%), Positives = 274/387 (70%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS 110
DVV+V RT + ++ RG FKDT PD+LL+ VL AV++ + P ++GDI VG VL PG+
Sbjct: 37 DVVVVHGRRTPIGRASRGCFKDTTPDELLSAVLTAVLQDVKLKPEQLGDISVGNVLQPGA 96
Query: 111 QRASECRMAAFYAGFPETVPVRTVNRQCSSGLQXXXXXXXXXXXGFYDIGIGAGLESMTV 170
A R+A F +G PETVP+ TVNRQCSSGLQ G YDIG+ G+ESMT+
Sbjct: 97 G-AIMARIAQFLSGIPETVPLSTVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMTL 155
Query: 171 NPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKXXXXXX 230
+ G+++ ++ E+A++CL+PMG+TSENVA RFGV+R++QD A+ S +K
Sbjct: 156 SQRGNHGNISSRLLENEKARDCLIPMGITSENVAERFGVSRQKQDAFALASQQKAASAQS 215
Query: 231 XGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGN 290
G F EI+PV T +++ K GD+K +T+S D+G+RP+T++ LAKLKP FK G+TTAGN
Sbjct: 216 RGCFHAEIVPVTTTVLNDK-GDKKTITVSQDEGVRPSTTMQGLAKLKPAFKDGGSTTAGN 274
Query: 291 SSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMXXXXXXXXXXXXKSAGL 350
SSQVSDGA AVLL +RS A GLPILGV R++A VGV P +M + AGL
Sbjct: 275 SSQVSDGAAAVLLARRSKAEELGLPILGVLRSYAVVGVPPDVMGIGPAYAIPAALQKAGL 334
Query: 351 QLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEM 410
++DID+FEINEAFASQ VYC KLG+ EK+N GGA+A+GHPLG TGAR V TLL+E+
Sbjct: 335 TVNDIDIFEINEAFASQAVYCVEKLGIPAEKVNPLGGAIALGHPLGCTGARQVVTLLNEL 394
Query: 411 KRRGRDCRFGVISMCIGTGMGAAAVFE 437
KRRGR +GV+SMCIGTGMGAAAVFE
Sbjct: 395 KRRGRRA-YGVVSMCIGTGMGAAAVFE 420
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| B6EGU1 | FADA_ALISL | 2, ., 3, ., 1, ., 1, 6 | 0.4318 | 0.8138 | 0.9715 | yes | no |
| C6DI66 | FADA_PECCP | 2, ., 3, ., 1, ., 1, 6 | 0.4278 | 0.8203 | 0.9793 | yes | no |
| P45359 | THLA_CLOAB | 2, ., 3, ., 1, ., 9 | 0.3884 | 0.8181 | 0.9642 | yes | no |
| A0KEL0 | FADA_AERHH | 2, ., 3, ., 1, ., 1, 6 | 0.4263 | 0.8181 | 0.9767 | yes | no |
| P09110 | THIK_HUMAN | 2, ., 3, ., 1, ., 1, 6 | 0.5506 | 0.9069 | 0.9882 | yes | no |
| P27796 | THIK_YEAST | 2, ., 3, ., 1, ., 1, 6 | 0.4886 | 0.8030 | 0.8896 | yes | no |
| Q8VCH0 | THIKB_MOUSE | 2, ., 3, ., 1, ., 1, 6 | 0.5609 | 0.9047 | 0.9858 | yes | no |
| Q8LF48 | THIK1_ARATH | 2, ., 3, ., 1, ., 1, 6 | 0.8381 | 0.9588 | 1.0 | no | no |
| Q05493 | THIK_YARLI | 2, ., 3, ., 1, ., 1, 6 | 0.5482 | 0.8333 | 0.9299 | yes | no |
| Q6DAP6 | FADA_ERWCT | 2, ., 3, ., 1, ., 1, 6 | 0.4253 | 0.8203 | 0.9793 | yes | no |
| Q8CQN7 | THLA_STAES | 2, ., 3, ., 1, ., 9 | 0.4110 | 0.8138 | 0.9543 | yes | no |
| Q570C8 | THIK5_ARATH | 2, ., 3, ., 1, ., 1, 6 | 0.7120 | 0.9610 | 0.9715 | no | no |
| A8G8D0 | FADA_SERP5 | 2, ., 3, ., 1, ., 1, 6 | 0.4329 | 0.8203 | 0.9793 | yes | no |
| B5FEW7 | FADA_VIBFM | 2, ., 3, ., 1, ., 1, 6 | 0.4217 | 0.8138 | 0.9715 | yes | no |
| A4TR28 | FADA_YERPP | 2, ., 3, ., 1, ., 1, 6 | 0.4303 | 0.8203 | 0.9793 | yes | no |
| Q1CNA0 | FADA_YERPN | 2, ., 3, ., 1, ., 1, 6 | 0.4303 | 0.8203 | 0.9793 | yes | no |
| Q66FR9 | FADA_YERPS | 2, ., 3, ., 1, ., 1, 6 | 0.4303 | 0.8203 | 0.9793 | yes | no |
| Q921H8 | THIKA_MOUSE | 2, ., 3, ., 1, ., 1, 6 | 0.5609 | 0.9047 | 0.9858 | yes | no |
| Q5E8X7 | FADA_VIBF1 | 2, ., 3, ., 1, ., 1, 6 | 0.4191 | 0.8138 | 0.9715 | yes | no |
| P44873 | ATOB_HAEIN | 2, ., 3, ., 1, ., 9 | 0.3940 | 0.8203 | 0.9643 | yes | no |
| P50174 | THIL_RHIME | 2, ., 3, ., 1, ., 9 | 0.4105 | 0.8160 | 0.9592 | yes | no |
| Q5HS07 | THLA_STAEQ | 2, ., 3, ., 1, ., 9 | 0.4110 | 0.8138 | 0.9543 | yes | no |
| P07871 | THIKB_RAT | 2, ., 3, ., 1, ., 1, 6 | 0.5612 | 0.9090 | 0.9905 | yes | no |
| Q6LW07 | FADA_PHOPR | 2, ., 3, ., 1, ., 1, 6 | 0.4080 | 0.8160 | 0.9741 | yes | no |
| Q56WD9 | THIK2_ARATH | 2, ., 3, ., 1, ., 1, 6 | 0.8913 | 0.9956 | 0.9956 | yes | no |
| B2VFE0 | FADA_ERWT9 | 2, ., 3, ., 1, ., 1, 6 | 0.4314 | 0.8225 | 0.9819 | yes | no |
| Q8ZAM9 | FADA_YERPE | 2, ., 3, ., 1, ., 1, 6 | 0.4303 | 0.8203 | 0.9793 | yes | no |
| P21775 | THIKA_RAT | 2, ., 3, ., 1, ., 1, 6 | 0.5563 | 0.9047 | 0.9858 | yes | no |
| Q8SVA6 | THIK_ENCCU | 2, ., 3, ., 1, ., 1, 6 | 0.4267 | 0.8116 | 0.9590 | yes | no |
| O32177 | FADA_BACSU | 2, ., 3, ., 1, ., 1, 6 | 0.4846 | 0.8311 | 0.9820 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.3.1 | 0.998 |
| 3rd Layer | 2.3.1.16 | 0.994 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 462 | |||
| PLN02287 | 452 | PLN02287, PLN02287, 3-ketoacyl-CoA thiolase | 0.0 | |
| cd00751 | 386 | cd00751, thiolase, Thiolase are ubiquitous enzymes | 0.0 | |
| TIGR01930 | 386 | TIGR01930, AcCoA-C-Actrans, acetyl-CoA acetyltrans | 1e-171 | |
| PRK05790 | 393 | PRK05790, PRK05790, putative acyltransferase; Prov | 1e-145 | |
| PRK09052 | 399 | PRK09052, PRK09052, acetyl-CoA acetyltransferase; | 1e-141 | |
| PRK07661 | 391 | PRK07661, PRK07661, acetyl-CoA acetyltransferase; | 1e-138 | |
| PRK07108 | 392 | PRK07108, PRK07108, acetyl-CoA acetyltransferase; | 1e-118 | |
| PRK08947 | 387 | PRK08947, fadA, 3-ketoacyl-CoA thiolase; Reviewed | 1e-117 | |
| PRK09051 | 394 | PRK09051, PRK09051, beta-ketothiolase; Provisional | 1e-116 | |
| PRK06445 | 394 | PRK06445, PRK06445, acetyl-CoA acetyltransferase; | 1e-111 | |
| COG0183 | 392 | COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid | 1e-106 | |
| PRK06205 | 404 | PRK06205, PRK06205, acetyl-CoA acetyltransferase; | 1e-106 | |
| PRK05656 | 393 | PRK05656, PRK05656, acetyl-CoA acetyltransferase; | 1e-103 | |
| PRK09050 | 401 | PRK09050, PRK09050, beta-ketoadipyl CoA thiolase; | 1e-98 | |
| TIGR02445 | 385 | TIGR02445, fadA, fatty oxidation complex, beta sub | 4e-97 | |
| TIGR02430 | 400 | TIGR02430, pcaF, 3-oxoadipyl-CoA thiolase | 3e-96 | |
| PRK08242 | 402 | PRK08242, PRK08242, acetyl-CoA acetyltransferase; | 8e-95 | |
| PRK07851 | 406 | PRK07851, PRK07851, acetyl-CoA acetyltransferase; | 3e-94 | |
| pfam00108 | 262 | pfam00108, Thiolase_N, Thiolase, N-terminal domain | 2e-93 | |
| PRK08235 | 393 | PRK08235, PRK08235, acetyl-CoA acetyltransferase; | 4e-92 | |
| PRK08131 | 401 | PRK08131, PRK08131, acetyl-CoA acetyltransferase; | 5e-90 | |
| PRK13359 | 400 | PRK13359, PRK13359, beta-ketoadipyl CoA thiolase; | 1e-88 | |
| PRK07801 | 382 | PRK07801, PRK07801, acetyl-CoA acetyltransferase; | 1e-87 | |
| PRK06504 | 390 | PRK06504, PRK06504, acetyl-CoA acetyltransferase; | 7e-87 | |
| PRK07850 | 387 | PRK07850, PRK07850, acetyl-CoA acetyltransferase; | 2e-86 | |
| PLN02644 | 394 | PLN02644, PLN02644, acetyl-CoA C-acetyltransferase | 5e-84 | |
| PRK06633 | 392 | PRK06633, PRK06633, acetyl-CoA acetyltransferase; | 2e-83 | |
| PRK08170 | 426 | PRK08170, PRK08170, acetyl-CoA acetyltransferase; | 1e-82 | |
| PRK08963 | 428 | PRK08963, fadI, 3-ketoacyl-CoA thiolase; Reviewed | 4e-80 | |
| PRK06690 | 361 | PRK06690, PRK06690, acetyl-CoA acetyltransferase; | 9e-77 | |
| PRK09268 | 427 | PRK09268, PRK09268, acetyl-CoA acetyltransferase; | 2e-68 | |
| PRK06025 | 417 | PRK06025, PRK06025, acetyl-CoA acetyltransferase; | 7e-68 | |
| PRK06954 | 397 | PRK06954, PRK06954, acetyl-CoA acetyltransferase; | 1e-67 | |
| PRK06366 | 388 | PRK06366, PRK06366, acetyl-CoA acetyltransferase; | 5e-64 | |
| pfam02803 | 123 | pfam02803, Thiolase_C, Thiolase, C-terminal domain | 9e-60 | |
| TIGR02446 | 430 | TIGR02446, FadI, fatty oxidation complex, beta sub | 2e-57 | |
| cd00826 | 393 | cd00826, nondecarbox_cond_enzymes, nondecarboxylat | 1e-50 | |
| cd00829 | 375 | cd00829, SCP-x_thiolase, Thiolase domain associate | 1e-16 | |
| cd00327 | 254 | cd00327, cond_enzymes, Condensing enzymes; Family | 2e-16 | |
| PRK06064 | 389 | PRK06064, PRK06064, acetyl-CoA acetyltransferase; | 4e-09 | |
| PRK12578 | 385 | PRK12578, PRK12578, acetyl-CoA acetyltransferase; | 4e-06 | |
| COG0304 | 412 | COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) sy | 8e-06 | |
| PRK07516 | 389 | PRK07516, PRK07516, acetyl-CoA acetyltransferase; | 8e-05 | |
| PRK06289 | 403 | PRK06289, PRK06289, acetyl-CoA acetyltransferase; | 0.001 | |
| PRK08256 | 391 | PRK08256, PRK08256, lipid-transfer protein; Provis | 0.001 | |
| PTZ00455 | 438 | PTZ00455, PTZ00455, 3-ketoacyl-CoA thiolase; Provi | 0.002 | |
| PRK07937 | 352 | PRK07937, PRK07937, lipid-transfer protein; Provis | 0.002 | |
| cd00830 | 320 | cd00830, KAS_III, Ketoacyl-acyl carrier protein sy | 0.003 |
| >gnl|CDD|215161 PLN02287, PLN02287, 3-ketoacyl-CoA thiolase | Back alignment and domain information |
|---|
Score = 898 bits (2323), Expect = 0.0
Identities = 392/455 (86%), Positives = 430/455 (94%), Gaps = 4/455 (0%)
Query: 1 MEKAINRQQVLLEHLRPSNSSSHNYESILSASACAAGDSAAYHRTSVYGDDVVIVAAYRT 60
MEKAINRQ+VLL HLRPS+S S LSASACAAGDSAAYHRT+ +GDDVVIVAAYRT
Sbjct: 1 MEKAINRQRVLLRHLRPSSS----EPSSLSASACAAGDSAAYHRTTAFGDDVVIVAAYRT 56
Query: 61 ALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAA 120
+CK+KRGGFKDTYPDDLLAPVLKAV+EKT ++PSEVGDIVVGTVLAPGSQRA+ECRMAA
Sbjct: 57 PICKAKRGGFKDTYPDDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAA 116
Query: 121 FYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVN 180
FYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAG+ESMT NPMAWEG VN
Sbjct: 117 FYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGVESMTTNPMAWEGGVN 176
Query: 181 PKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIP 240
P+V++F QAQ+CLLPMG+TSENVA RFGVTR+EQDQAAV+SHRKAAAATA+GKFKDEI+P
Sbjct: 177 PRVESFSQAQDCLLPMGITSENVAERFGVTREEQDQAAVESHRKAAAATASGKFKDEIVP 236
Query: 241 VATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGA 300
V TKIVDPKTG+EKP+ ISVDDGIRPNT++++LAKLKPVFKK+GTTTAGNSSQVSDGAGA
Sbjct: 237 VHTKIVDPKTGEEKPIVISVDDGIRPNTTLADLAKLKPVFKKNGTTTAGNSSQVSDGAGA 296
Query: 301 VLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEI 360
VLLMKRSVAM+KGLPILGVFR+FAAVGVDPA+MG+GPAVAIPAAVK+AGL+LDDIDLFEI
Sbjct: 297 VLLMKRSVAMQKGLPILGVFRSFAAVGVDPAVMGIGPAVAIPAAVKAAGLELDDIDLFEI 356
Query: 361 NEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFG 420
NEAFASQFVYC KLGLDPEK+NVNGGA+A+GHPLG TGARCVATLLHEMKRRG+DCRFG
Sbjct: 357 NEAFASQFVYCCKKLGLDPEKVNVNGGAIALGHPLGATGARCVATLLHEMKRRGKDCRFG 416
Query: 421 VISMCIGTGMGAAAVFERGDCADELCNVRKVESNN 455
V+SMCIGTGMGAAAVFERGD DEL N RKVE NN
Sbjct: 417 VVSMCIGTGMGAAAVFERGDSVDELSNARKVEGNN 451
|
Length = 452 |
| >gnl|CDD|238383 cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Score = 525 bits (1356), Expect = 0.0
Identities = 202/396 (51%), Positives = 260/396 (65%), Gaps = 20/396 (5%)
Query: 53 VIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQR 112
VIV+A RT + + G KD DDL A V+KA++E+ +DP EV D+++G VL G +
Sbjct: 1 VIVSAVRTPIGRFG-GALKDVSADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAG-EG 58
Query: 113 ASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNP 172
+ R AA AG PE+VP TVNR C SGLQAVA A +I AG D+ + G+ESM+ P
Sbjct: 59 QNPARQAALLAGLPESVPATTVNRVCGSGLQAVALAAQSIAAGEADVVVAGGVESMSRAP 118
Query: 173 MAWEGSVNPK----------VKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSH 222
+ + L MG+T+ENVA ++G++R+EQD+ A+ SH
Sbjct: 119 YLLPKARRGGRLGLNTLDGMLDDGLTDPFTGLSMGITAENVAEKYGISREEQDEFALRSH 178
Query: 223 RKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK 282
++AAAA AG+FKDEI+PV G + PV + D+G RP+T++ +LAKLKP FKK
Sbjct: 179 QRAAAAQEAGRFKDEIVPVEVP------GRKGPVVVDRDEGPRPDTTLEKLAKLKPAFKK 232
Query: 283 DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIP 342
DGT TAGN+S ++DGA AVLLM A GL L +A GVDPAIMG+GP AIP
Sbjct: 233 DGTVTAGNASGINDGAAAVLLMSEEKAKELGLKPLARIVGYAVAGVDPAIMGIGPVPAIP 292
Query: 343 AAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARC 402
A+K AGL LDDIDL EINEAFA+Q + C +LGLDPEK+NVNGGA+A+GHPLG +GAR
Sbjct: 293 KALKRAGLTLDDIDLIEINEAFAAQALACLKELGLDPEKVNVNGGAIALGHPLGASGARI 352
Query: 403 VATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438
V TLLHE+KRRG R+G+ +MCIG G GAA V ER
Sbjct: 353 VVTLLHELKRRG--GRYGLATMCIGGGQGAAMVIER 386
|
They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. Length = 386 |
| >gnl|CDD|233642 TIGR01930, AcCoA-C-Actrans, acetyl-CoA acetyltransferases | Back alignment and domain information |
|---|
Score = 486 bits (1254), Expect = e-171
Identities = 193/396 (48%), Positives = 253/396 (63%), Gaps = 22/396 (5%)
Query: 54 IVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRA 113
IVAA RT + K G KD +DL A V+K ++E+ +DP + D++ G VL G Q
Sbjct: 1 IVAAARTPIGKFG-GSLKDVSAEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQ-Q 58
Query: 114 SECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPM 173
+ R AA AG PE+VP TVNRQC+SGLQAV A I+AG D+ + G+ESM+ P
Sbjct: 59 NIARQAALLAGLPESVPAYTVNRQCASGLQAVILAAQLIRAGEADVVVAGGVESMSRVPY 118
Query: 174 AW----EGSVNPKVKAFEQAQNCL--------LPMGVTSENVAHRFGVTRKEQDQAAVDS 221
+ V P E L MG+T+EN+A ++G++R+EQD+ A+ S
Sbjct: 119 SVPRSRRWGVKPGNAELEDQILKDGLDDPLNGLSMGLTAENLAKKYGISREEQDEYALRS 178
Query: 222 HRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFK 281
H++AA A G FKDEI+PV + K PV +S D+GIRPNT++ +LAKLKP F
Sbjct: 179 HQRAAKAWEEGLFKDEIVPV--SVKGRK----GPVVVSSDEGIRPNTTLEKLAKLKPAFD 232
Query: 282 KDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAI 341
+GT TAGNSS ++DGA A+LLM A GL L ++A GVDP IMG+GP AI
Sbjct: 233 PNGTVTAGNSSPLNDGAAALLLMSEEKAKELGLTPLARIVSYAVAGVDPEIMGLGPVPAI 292
Query: 342 PAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGAR 401
P A+K AGL + DIDLFEINEAFA+Q + C +LGLD EK+NVNGGA+A+GHPLG +GAR
Sbjct: 293 PKALKKAGLSISDIDLFEINEAFAAQVLACIKELGLDLEKVNVNGGAIALGHPLGASGAR 352
Query: 402 CVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 437
V TLLHE+KRRG R+G+ ++CIG G G A + E
Sbjct: 353 IVTTLLHELKRRGG--RYGLATICIGGGQGIAVILE 386
|
This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatty acid oxidation [Fatty acid and phospholipid metabolism, Other]. Length = 386 |
| >gnl|CDD|180261 PRK05790, PRK05790, putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 419 bits (1080), Expect = e-145
Identities = 187/409 (45%), Positives = 253/409 (61%), Gaps = 38/409 (9%)
Query: 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPG 109
DVVIV+A RT + K G KD +L A V+KA +E+ V P +V ++++G VL G
Sbjct: 2 KDVVIVSAARTPIGKFG-GALKDVSAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAG 60
Query: 110 SQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMT 169
+ + + R AA AG P VP T+N+ C SGL+AVA A AI+AG DI + G ESM+
Sbjct: 61 AGQ-NPARQAALKAGLPVEVPALTINKVCGSGLKAVALAAQAIRAGDADIVVAGGQESMS 119
Query: 170 VNP--------------------MAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGV 209
P M +G + AF MG+T+EN+A ++G+
Sbjct: 120 QAPHVLPGSRWGQKMGDVELVDTMIHDGLTD----AFNG-----YHMGITAENLAEQYGI 170
Query: 210 TRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTS 269
TR+EQD+ A+ S +KA AA AG+FKDEI+PV K + GD PV + D+ RP+T+
Sbjct: 171 TREEQDEFALASQQKAEAAIKAGRFKDEIVPVTIKQ---RKGD--PVVVDTDEHPRPDTT 225
Query: 270 VSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVD 329
LAKL+P F KDGT TAGN+S ++DGA AV++M + A GL L ++A GVD
Sbjct: 226 AESLAKLRPAFDKDGTVTAGNASGINDGAAAVVVMSEAKAKELGLTPLARIVSYAVAGVD 285
Query: 330 PAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGAL 389
PAIMG+GP AI A++ AG L D+DL EINEAFA+Q + +LGLDPEK+NVNGGA+
Sbjct: 286 PAIMGIGPVPAIRKALEKAGWSLADLDLIEINEAFAAQALAVEKELGLDPEKVNVNGGAI 345
Query: 390 AIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438
A+GHP+G +GAR + TLLHEMKRRG + G+ ++CIG G G A + ER
Sbjct: 346 ALGHPIGASGARILVTLLHEMKRRG--AKKGLATLCIGGGQGVALIVER 392
|
Length = 393 |
| >gnl|CDD|181626 PRK09052, PRK09052, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 411 bits (1058), Expect = e-141
Identities = 189/396 (47%), Positives = 259/396 (65%), Gaps = 12/396 (3%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKT-NVDPSEVGDIVVGTVLAPG 109
D IVAA RT + K+ RG FK+T PDDLLA VL++ + + +DP + D +VG +
Sbjct: 7 DAYIVAATRTPVGKAPRGMFKNTRPDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEA 66
Query: 110 SQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMT 169
Q + R+ A AG P +V TVNR C+SGLQAVA A I+ G D+ I AG+ESM+
Sbjct: 67 EQGLNVARIGALLAGLPNSVGGVTVNRFCASGLQAVAMAADRIRVGEADVMIAAGVESMS 126
Query: 170 VNPMAWEG-SVNPKVKAFEQAQNCLLP--MGVTSENVAHRFGVTRKEQDQAAVDSHRKAA 226
+ PM S++P + F + +N + MG+T+E VA ++ V+R++QD A++SH+KA
Sbjct: 127 MVPMMGNKPSMSPAI--FARDENVGIAYGMGLTAEKVAEQWKVSREDQDAFALESHQKAI 184
Query: 227 AATAAGKFKDEIIP--VATKIVDPKTG--DEKPVTISVDDGIRPNTSVSELAKLKPVFKK 282
AA AG+FKDEI P + + D TG D K T+ +D+G R +TS+ LAKLKPVF
Sbjct: 185 AAQQAGEFKDEITPYEITERFPDLATGEVDVKTRTVDLDEGPRADTSLEGLAKLKPVFAN 244
Query: 283 DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIP 342
G+ TAGNSSQ SDGAGAV+L+ + L L F +FA GV P IMG+GP AIP
Sbjct: 245 KGSVTAGNSSQTSDGAGAVILVSEKALKQFNLTPLARFVSFAVAGVPPEIMGIGPIEAIP 304
Query: 343 AAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARC 402
AA+K AGL+ DD+D E+NEAFA+Q + LGLDP K+N GGA+A+GHPLG TGA
Sbjct: 305 AALKQAGLKQDDLDWIELNEAFAAQSLAVIRDLGLDPSKVNPLGGAIALGHPLGATGAIR 364
Query: 403 VATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438
AT++H ++R ++G+++MC+GTGMGAA +FER
Sbjct: 365 TATVVHGLRRTNL--KYGMVTMCVGTGMGAAGIFER 398
|
Length = 399 |
| >gnl|CDD|181072 PRK07661, PRK07661, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 402 bits (1035), Expect = e-138
Identities = 185/389 (47%), Positives = 246/389 (63%), Gaps = 6/389 (1%)
Query: 53 VIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQR 112
VIVA RT + K+K+G K PDDL A V+K +++ + D+++G + Q
Sbjct: 5 VIVAGARTPVGKAKKGSLKTVRPDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQG 64
Query: 113 ASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNP 172
+ R AG P TVP T+NR CSSGLQ++A A I G + I G ESM++ P
Sbjct: 65 LNMARNIGALAGLPYTVPAITINRYCSSGLQSIAYGAERIMLGHSEAVIAGGAESMSLVP 124
Query: 173 MAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAG 232
M V P + E A + MG T+E VA ++G++R++QD AV SH++AA A A G
Sbjct: 125 MMGH-VVRPNPRLVEAAPEYYMGMGHTAEQVAVKYGISREDQDAFAVRSHQRAAKALAEG 183
Query: 233 KFKDEIIPV---ATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAG 289
KF DEI+PV + + E+ +T S D+G+R +T++ L KL+P F G+ TAG
Sbjct: 184 KFADEIVPVDVTLRTVGENNKLQEETITFSQDEGVRADTTLEILGKLRPAFNVKGSVTAG 243
Query: 290 NSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAG 349
NSSQ+SDGA AVLLM R A GL L FR+FA GV P +MG+GP AIP A+K AG
Sbjct: 244 NSSQMSDGAAAVLLMDREKAESDGLKPLAKFRSFAVAGVPPEVMGIGPIAAIPKALKLAG 303
Query: 350 LQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHE 409
L+L DI LFE+NEAFASQ + +LGLD EK+NVNGGA+A+GHPLG TGA+ +L+HE
Sbjct: 304 LELSDIGLFELNEAFASQSIQVIRELGLDEEKVNVNGGAIALGHPLGCTGAKLTLSLIHE 363
Query: 410 MKRRGRDCRFGVISMCIGTGMGAAAVFER 438
MKRR +FG+++MCIG GMGAA VFE
Sbjct: 364 MKRRNE--QFGIVTMCIGGGMGAAGVFEL 390
|
Length = 391 |
| >gnl|CDD|180843 PRK07108, PRK07108, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 350 bits (901), Expect = e-118
Identities = 176/397 (44%), Positives = 246/397 (61%), Gaps = 19/397 (4%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS 110
+ VIV+ RT L KS RG F T+ L V++ +E+ +DP+EV D+++G G+
Sbjct: 3 EAVIVSTARTPLAKSWRGAFNMTHGATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGA 62
Query: 111 QRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTV 170
A+ R A AG P TVP TVNR CSSGLQ +A A + AG D+ + G+ES++
Sbjct: 63 TGANIARQIALRAGLPVTVPGMTVNRFCSSGLQTIALAAQRVIAGEGDVFVAGGVESISC 122
Query: 171 ------NPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRK 224
M EG + E M T+ENVA R+G++++ QD+ V S ++
Sbjct: 123 VQNEMNRHMLREGWLV------EHKPEIYWSMLQTAENVAKRYGISKERQDEYGVQSQQR 176
Query: 225 AAAATAAGKFKDEIIP--VATKIVDPKTGD--EKPVTISVDDGIRPNTSVSELAKLKPVF 280
AAAA AAG+F DEI+P V + D TG K VT+S D+GIRP+T++ ++K++
Sbjct: 177 AAAAQAAGRFDDEIVPITVTAGVADKATGRLFTKEVTVSADEGIRPDTTLEGVSKIRSAL 236
Query: 281 KKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVA 340
G TAGN+SQ SDGA A ++M VA R+GL LG+FR FA G +P MG+GP A
Sbjct: 237 P-GGVITAGNASQFSDGASACVVMNAKVAEREGLQPLGIFRGFAVAGCEPDEMGIGPVFA 295
Query: 341 IPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGA 400
+P +K AGL++DDIDL+E+NEAFA Q +YCR+ LG+ +++NVNGGA+A+GHP G +GA
Sbjct: 296 VPKLLKQAGLKVDDIDLWELNEAFAVQVLYCRDTLGIPMDRLNVNGGAIAVGHPYGVSGA 355
Query: 401 RCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 437
R L E KRRG ++ V++MCIG G GAA +FE
Sbjct: 356 RLTGHALIEGKRRG--AKYVVVTMCIGGGQGAAGLFE 390
|
Length = 392 |
| >gnl|CDD|181592 PRK08947, fadA, 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Score = 348 bits (894), Expect = e-117
Identities = 171/394 (43%), Positives = 235/394 (59%), Gaps = 16/394 (4%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKT-NVDPSEVGDIVVGTVLAPG 109
DVVIV A RT + +SK G F++ +DL A ++++++ + +DP+E+ DI+ G V
Sbjct: 3 DVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTL 62
Query: 110 SQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMT 169
Q + R AA AG P +VP TVNR C S +QA+ D A AI G D+ + G+E M
Sbjct: 63 EQGFNIARNAALLAGIPHSVPAVTVNRLCGSSMQALHDAARAIMTGDGDVFLIGGVEHMG 122
Query: 170 VNPMAWEGSVNPKV-KAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAA 228
PM +P + K +A MG+T+E + G++R++QD A SH++A AA
Sbjct: 123 HVPMNHGVDFHPGLSKNVAKAAGM---MGLTAEMLGKMHGISREQQDAFAARSHQRAWAA 179
Query: 229 TAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFK-KDGTTT 287
T G+FK+EIIP + D D+ IRP T+V LA L+P F +GT T
Sbjct: 180 TQEGRFKNEIIPT-----EGHDADGVLKLFDYDEVIRPETTVEALAALRPAFDPVNGTVT 234
Query: 288 AGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKS 347
AG SS +SDGA A+L+M S A GL R+ A G DP+IMG GP A A+K
Sbjct: 235 AGTSSALSDGASAMLVMSESRAKELGLKPRARIRSMAVAGCDPSIMGYGPVPATQKALKR 294
Query: 348 AGLQLDDIDLFEINEAFASQFVYCRNKLGL---DPEKINVNGGALAIGHPLGTTGARCVA 404
AGL + DID+FE+NEAFA+Q + C LGL EK+N+NGGA+A+GHPLG +GAR
Sbjct: 295 AGLSISDIDVFELNEAFAAQSLPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARIST 354
Query: 405 TLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438
TLL+ M+R +D +FG+ +MCIG G G A VFER
Sbjct: 355 TLLNLMER--KDAQFGLATMCIGLGQGIATVFER 386
|
Length = 387 |
| >gnl|CDD|181625 PRK09051, PRK09051, beta-ketothiolase; Provisional | Back alignment and domain information |
|---|
Score = 346 bits (891), Expect = e-116
Identities = 172/403 (42%), Positives = 241/403 (59%), Gaps = 28/403 (6%)
Query: 51 DVVIVAAYRTALCKSKRGGF----KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVL 106
+VV+V+ RTA+ G F KD P DL A V++ + + VDP +VG +V G V+
Sbjct: 4 EVVVVSGVRTAI-----GTFGGSLKDVAPTDLGATVVREALARAGVDPDQVGHVVFGHVI 58
Query: 107 APGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLE 166
+ R+AA AG P+ P VNR C SGLQA+ A AI G D+ IG G E
Sbjct: 59 PTEPRDMYLSRVAAINAGVPQETPAFNVNRLCGSGLQAIVSAAQAILLGDADVAIGGGAE 118
Query: 167 SMT----VNPMAWEGSVNPKVKAFEQAQNCL------LPMGVTSENVAHRFGVTRKEQDQ 216
SM+ + P A G+ K + L + MGVT+ENVA ++G++R+ QD
Sbjct: 119 SMSRAPYLLPAARWGARMGDAKLVDMMVGALHDPFGTIHMGVTAENVAAKYGISREAQDA 178
Query: 217 AAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKL 276
A++SHR+AAAA AAG FKD+I+PV K + G+ V D+ +R +T++ +LAKL
Sbjct: 179 LALESHRRAAAAIAAGYFKDQIVPVEIKT---RKGE---VVFDTDEHVRADTTLEDLAKL 232
Query: 277 KPVFKKD-GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGV 335
KPVFKK+ GT TAGN+S ++DGA AV+L + A +GL L +A GVDP MG+
Sbjct: 233 KPVFKKENGTVTAGNASGINDGAAAVVLAEADAAEARGLKPLARLVGYAHAGVDPEYMGI 292
Query: 336 GPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPL 395
GP A A++ AGL + D+D+ E NEAFA+Q +LGLDP K+N NG +++GHP+
Sbjct: 293 GPVPATQKALERAGLTVADLDVIEANEAFAAQACAVTRELGLDPAKVNPNGSGISLGHPV 352
Query: 396 GTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438
G TGA L+E++R G R+ +++MCIG G G AA+FER
Sbjct: 353 GATGAIITVKALYELQRIGG--RYALVTMCIGGGQGIAAIFER 393
|
Length = 394 |
| >gnl|CDD|180563 PRK06445, PRK06445, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 332 bits (853), Expect = e-111
Identities = 162/400 (40%), Positives = 226/400 (56%), Gaps = 19/400 (4%)
Query: 50 DDVVIVAAYRTALCKSK-----RGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGT 104
+DV +V RTA + + + F + P++L A ++ +IEKT + P E+ DI+ G
Sbjct: 2 EDVYLVDFARTAFSRFRPKDPQKDVFNNIRPEELAAMLINRLIEKTGIKPEEIDDIITGC 61
Query: 105 VLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAG 164
L G R F A P +P V+RQC+S L V+ A I G DI I G
Sbjct: 62 ALQVGENWLYGGRHPIFLARLPYNIPAMAVDRQCASSLTTVSIGAMEIATGMADIVIAGG 121
Query: 165 LESMTVNPMAWEGSVNPKVKAFEQAQ------NCLLPMGVTSENVAHRFGVTRKEQDQAA 218
+E MT PM + P K + MG+T+E +A G+ R+E D+ +
Sbjct: 122 VEHMTRTPMGDNPHIEPNPKLLTDPKYIEYDLTTGYVMGLTAEKLAEEAGIKREEMDRWS 181
Query: 219 VDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKP 278
+ SH+ AA A G FKDEI+P+ ++ + K + VD +RP+TS+ +LAKL P
Sbjct: 182 LRSHQLAAKAIQEGYFKDEILPIEVEV------EGKKKVVDVDQSVRPDTSLEKLAKLPP 235
Query: 279 VFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPA 338
FK DG TAGNSS ++ GA VLLM + + GL + R+F GV PAIMG GP
Sbjct: 236 AFKPDGVITAGNSSPLNSGASYVLLMSKKAVKKYGLKPMAKIRSFGFAGVPPAIMGKGPV 295
Query: 339 VAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTT 398
A A++ AGL + DIDL+EINEAFA +Y +LGLDPE +N+ GGA+AIGHPLG T
Sbjct: 296 PASKKALEKAGLSVKDIDLWEINEAFAVVVLYAIKELGLDPETVNIKGGAIAIGHPLGAT 355
Query: 399 GARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438
GAR V TL +++ +G+D +GV ++C+G G G A V ER
Sbjct: 356 GARIVGTLARQLQIKGKD--YGVATLCVGGGQGGAVVLER 393
|
Length = 394 |
| >gnl|CDD|223261 COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 321 bits (825), Expect = e-106
Identities = 160/405 (39%), Positives = 220/405 (54%), Gaps = 29/405 (7%)
Query: 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKT--NVDPSEVGDIVVGTVL 106
DV IV A RT K G + + L A ++ A +E+ +VD ++V D+++G VL
Sbjct: 1 MRDVAIVGAGRTPFGKFGDGSLAELAAEALGAALIDAGLERAPADVDAADVDDVILGCVL 60
Query: 107 APGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLE 166
G Q + R AA AG P +VP TVNR C+SGL AV A AI +G D+ + G+E
Sbjct: 61 QAGEQGQNIARQAALAAGLPGSVPAVTVNRACASGLAAVRLAAQAIASGEADVVLAGGVE 120
Query: 167 SMTVNPMAWEGS------VNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVD 220
M+ PM EG V+P + MG+T+E A R+G++R++QD+ AV
Sbjct: 121 KMSDAPMGREGVRVLDSAVDPMFEDPLGDATPGYLMGLTAERYAKRYGISREDQDEVAVK 180
Query: 221 SHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTS-VSE-LAKLKP 278
SH+ AAA AG F DEI P D + D R + S S+ A L P
Sbjct: 181 SHKNAAANPKAGFF-DEITPE----------DVLNSPVVADPLRRLDCSPTSDGAAALVP 229
Query: 279 VFKK-DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGP 337
F++ GT TAGN+S ++DGA A+LLM S A GL L R +A GVDP+IM GP
Sbjct: 230 AFEEVGGTVTAGNASGINDGAAALLLMSESKAKELGLAPLAAIRAYAMAGVDPSIM-DGP 288
Query: 338 AVAIPAAVKSAGLQ-LDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLG 396
A+ A+ AGL L+D+ L E EAFA+ + LG P +N +GGA+A+GHP+G
Sbjct: 289 VAAVHDALTIAGLLALEDLGLAEKGEAFAAVALGVTKILGDLP--VNPSGGAIALGHPIG 346
Query: 397 TTGARCVATLLHEMKRRG--RDCRFGVISMCIG-TGMGAAAVFER 438
TGAR + L +++ RG R G+ ++CIG G G AAV ER
Sbjct: 347 ATGARILVELARQLRGRGQVVAKRRGLATLCIGGGGQGVAAVLER 391
|
Length = 392 |
| >gnl|CDD|235741 PRK06205, PRK06205, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 320 bits (822), Expect = e-106
Identities = 164/409 (40%), Positives = 233/409 (56%), Gaps = 30/409 (7%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS 110
D VI RT + + G FKD ++L A V++A++E+T +DP+ + D++ G P
Sbjct: 3 DAVICEPVRTPVGRFG-GAFKDVPAEELAATVIRALVERTGIDPARIDDVIFGQGY-PNG 60
Query: 111 QRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMT- 169
+ + R+AA AG P TVP ++R+C SGLQAV A ++ G D+ I G ESM+
Sbjct: 61 EAPAIGRVAALDAGLPVTVPGMQLDRRCGSGLQAVITAAMQVQTGAADVVIAGGAESMSN 120
Query: 170 ----VNPMAW---EGSVNPK---VKAFEQAQNCLLP----MGVTSENVAHRFGVTRKEQD 215
M W G V + E A P M T+EN+ +G++R+EQD
Sbjct: 121 VEFYTTDMRWGVRGGGVQLHDRLARGRETAGGRRFPVPGGMIETAENLRREYGISREEQD 180
Query: 216 QAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAK 275
AV SH++A AA AG+F DEI+PV V + GD P + D+ R +T++ LAK
Sbjct: 181 ALAVRSHQRAVAAQEAGRFDDEIVPVT---VPQRKGD--PTVVDRDEHPRADTTLESLAK 235
Query: 276 LKPVFKK---DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAI 332
L+P+ K + T TAGN+S +D A A L+ A GL L ++A GV+P+
Sbjct: 236 LRPIMGKQDPEATVTAGNASGQNDAAAACLVTTEDKAEELGLRPLARLVSWAVAGVEPSR 295
Query: 333 MGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGL---DPEKINVNGGAL 389
MG+GP A A+ AGL LDDIDL E+NEAFA+Q + + G D E++NVNG +
Sbjct: 296 MGIGPVPATEKALARAGLTLDDIDLIELNEAFAAQVLAVLKEWGFGADDEERLNVNGSGI 355
Query: 390 AIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438
++GHP+G TG R +ATLL E++R R R+G+ +MCIG G G AAVFER
Sbjct: 356 SLGHPVGATGGRILATLLRELQR--RQARYGLETMCIGGGQGLAAVFER 402
|
Length = 404 |
| >gnl|CDD|168156 PRK05656, PRK05656, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 311 bits (799), Expect = e-103
Identities = 165/400 (41%), Positives = 242/400 (60%), Gaps = 20/400 (5%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS 110
DVVIVAA RTA+ S +G + +L A V++ ++E+T +DP++V ++++G VL G+
Sbjct: 3 DVVIVAATRTAI-GSFQGSLANIPAVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGA 61
Query: 111 QRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTV 170
+ + R AA AG P +VP T+N+ C SGL+A+ A AI+ G ++ I G E+M++
Sbjct: 62 GQ-NPARQAAIKAGLPHSVPAMTLNKVCGSGLKALHLAAQAIRCGDAEVIIAGGQENMSL 120
Query: 171 NPMAWEGSVNPKVKAFEQAQNCLLP-----------MGVTSENVAHRFGVTRKEQDQAAV 219
P G+ Q + ++ MG+T+EN+ ++G++R+ QD A
Sbjct: 121 APYVLPGARTGLRMGHAQLVDSMITDGLWDAFNDYHMGITAENLVEKYGISREAQDAFAA 180
Query: 220 DSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPV 279
S +KA AA AG+F DEI P+ ++ + G+ P+ + D+ R T+ LAKLKP
Sbjct: 181 ASQQKAVAAIEAGRFDDEITPI---LIPQRKGE--PLAFATDEQPRAGTTAESLAKLKPA 235
Query: 280 FKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAV 339
FKKDG+ TAGN+S ++DGA AVLLM + A GLP+L +A GVDPAIMG+GP
Sbjct: 236 FKKDGSVTAGNASSLNDGAAAVLLMSAAKAKALGLPVLAKIAAYANAGVDPAIMGIGPVS 295
Query: 340 AIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTG 399
A + AG L ++DL E NEAFA+Q + +LG D K+NVNGGA+A+GHP+G +G
Sbjct: 296 ATRRCLDKAGWSLAELDLIEANEAFAAQSLAVGKELGWDAAKVNVNGGAIALGHPIGASG 355
Query: 400 ARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFERG 439
R + TLLHEM R RD + G+ ++CIG G G A ER
Sbjct: 356 CRVLVTLLHEMIR--RDAKKGLATLCIGGGQGVALAIERD 393
|
Length = 393 |
| >gnl|CDD|181624 PRK09050, PRK09050, beta-ketoadipyl CoA thiolase; Validated | Back alignment and domain information |
|---|
Score = 301 bits (772), Expect = 1e-98
Identities = 165/398 (41%), Positives = 223/398 (56%), Gaps = 43/398 (10%)
Query: 68 GGFKDTYPDDLLAPVLKAVIEKT-NVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFP 126
G DDL A LKA++ + VD V D++ G G + RM+A AG P
Sbjct: 19 GALSSVRADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLP 78
Query: 127 ETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNP-------------- 172
+VP T+NR C SG+ AV A AIKAG ++ I G+ESM+ P
Sbjct: 79 VSVPGTTINRLCGSGMDAVGTAARAIKAGEAELMIAGGVESMSRAPFVMGKADSAFSRQA 138
Query: 173 ------MAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAA 226
+ W VNP +KA Q + M T+ENVA + ++R +QD A+ S ++AA
Sbjct: 139 EIFDTTIGWR-FVNPLMKA----QYGVDSMPETAENVAEDYNISRADQDAFALRSQQRAA 193
Query: 227 AATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTT 286
AA AAG +EI+PV + K GD PV + D+ RP T++ LAKLKPVF+ DGT
Sbjct: 194 AAQAAGFLAEEIVPVT---IPQKKGD--PVVVDRDEHPRPETTLEALAKLKPVFRPDGTV 248
Query: 287 TAGNSSQVSDGAGAVLLMKRSVAMRKGLP----ILGVFRTFAAVGVDPAIMGVGPAVAIP 342
TAGN+S V+DGA A+LL + A + GL ILG A GV+P IMG+GPA A
Sbjct: 249 TAGNASGVNDGAAALLLASEAAAKKHGLTPRARILG----MATAGVEPRIMGIGPAPATR 304
Query: 343 AAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGL--DPEKINVNGGALAIGHPLGTTGA 400
+ GL +D D+ E+NEAFA+Q + +LGL D ++N NGGA+A+GHPLG +GA
Sbjct: 305 KLLARLGLTIDQFDVIELNEAFAAQGLAVLRQLGLADDDARVNPNGGAIALGHPLGMSGA 364
Query: 401 RCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438
R V T LH+++R G R+ + +MCIG G G A ER
Sbjct: 365 RLVLTALHQLERTGG--RYALCTMCIGVGQGIALAIER 400
|
Length = 401 |
| >gnl|CDD|131498 TIGR02445, fadA, fatty oxidation complex, beta subunit FadA | Back alignment and domain information |
|---|
Score = 296 bits (760), Expect = 4e-97
Identities = 171/393 (43%), Positives = 226/393 (57%), Gaps = 14/393 (3%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEK-TNVDPSEVGDIVVGTVLAPG 109
DVVIV RT + +SK G F++T +DL A ++ ++ + VDP+EV DI G V
Sbjct: 1 DVVIVDFGRTPMGRSKGGAFRNTRAEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTL 60
Query: 110 SQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMT 169
Q + R AA A P T TVNR C S +QA+ D A AI G D+ + G+E M
Sbjct: 61 EQGFNIARNAALLAQIPHTSAAVTVNRLCGSSMQALHDAARAIMTGDADVCLVGGVEHMG 120
Query: 170 VNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAAT 229
PM +P + + MG+T+E + G++R++QD A SH +A AAT
Sbjct: 121 HVPMMHGVDFHPGMSLHVAKAAGM--MGLTAEMLGKMHGISREQQDAFAARSHARAHAAT 178
Query: 230 AAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFK-KDGTTTA 288
GKFK+EIIP D G K D+ IRP T+V LA L+P F K+GT TA
Sbjct: 179 QEGKFKNEIIPTQGHDAD---GFLK--QFDYDEVIRPETTVESLAALRPAFDPKNGTVTA 233
Query: 289 GNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSA 348
G SS +SDGA A+L+M A GL R+ A G DP+IMG GP A A+K A
Sbjct: 234 GTSSALSDGASAMLVMSEQRANELGLKPRARIRSMAVAGCDPSIMGYGPVPATQKALKRA 293
Query: 349 GLQLDDIDLFEINEAFASQFVYCRNKLGL---DPEKINVNGGALAIGHPLGTTGARCVAT 405
GL + DID+FE+NEAFA+Q + C LGL EK+N+NGGA+A+GHPLG +GAR T
Sbjct: 294 GLSISDIDVFELNEAFAAQALPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTT 353
Query: 406 LLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438
LL+ M++ +D FG+ +MCIG G G A VFER
Sbjct: 354 LLNLMEQ--KDATFGLATMCIGLGQGIATVFER 384
|
This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli [Fatty acid and phospholipid metabolism, Degradation]. Length = 385 |
| >gnl|CDD|131483 TIGR02430, pcaF, 3-oxoadipyl-CoA thiolase | Back alignment and domain information |
|---|
Score = 295 bits (757), Expect = 3e-96
Identities = 161/411 (39%), Positives = 224/411 (54%), Gaps = 36/411 (8%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKT-NVDPSEVGDIVVGTVLAPG 109
+ I A RT + + G DDL A +KA++ + +D + + D++ G G
Sbjct: 2 EAYICDAIRTPIGRYG-GSLSSVRADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAG 60
Query: 110 SQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMT 169
+ RMAA AG P +VP TVNR C SGL A+ A AIKAG D+ I G+ESM+
Sbjct: 61 EDNRNVARMAALLAGLPVSVPGTTVNRLCGSGLDAIGMAARAIKAGEADLLIAGGVESMS 120
Query: 170 VNP--------------------MAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGV 209
P + W +NP +KA + M T+ENVA FG+
Sbjct: 121 RAPFVMGKADSAFSRSAKIEDTTIGWR-FINPLMKA----LYGVDSMPETAENVAEEFGI 175
Query: 210 TRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTS 269
+R++QD A+ S ++ AAA A+G F +EI+PV + K G+ P + D+ RP T+
Sbjct: 176 SREDQDAFALRSQQRTAAAQASGFFAEEIVPVV---IPQKKGE--PTVVDQDEHPRPETT 230
Query: 270 VSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVD 329
+ LAKLKPV + DGT TAGN+S V+DGA A+LL R GL A GV+
Sbjct: 231 LEGLAKLKPVVRPDGTVTAGNASGVNDGAAALLLASEEAVQRHGLTPRARILAAATAGVE 290
Query: 330 PAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGL--DPEKINVNGG 387
P IMG+GP A + AGL +D D+ E+NEAFA+Q + +LGL D ++N NGG
Sbjct: 291 PRIMGIGPVPATQKLLARAGLSIDQFDVIELNEAFAAQALAVLRELGLADDDARVNPNGG 350
Query: 388 ALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438
A+A+GHPLG +GAR V T L +++R G R+ + +MCIG G G A ER
Sbjct: 351 AIALGHPLGASGARLVLTALRQLERSGG--RYALCTMCIGVGQGIALAIER 399
|
Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid. Length = 400 |
| >gnl|CDD|236197 PRK08242, PRK08242, acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Score = 291 bits (747), Expect = 8e-95
Identities = 157/416 (37%), Positives = 226/416 (54%), Gaps = 45/416 (10%)
Query: 51 DVVIVAAYRTALCKSKRGG-FKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPG 109
+ I A RT K K+ G + P L A +L+A+ ++ +D + V D+V+G V G
Sbjct: 3 EAYIYDAVRTPRGKGKKDGSLHEVKPVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVG 62
Query: 110 SQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMT 169
Q A R A AG PETVP +NR C+SGL+AV AA +++G+ D+ I G+ESM+
Sbjct: 63 DQGADIARTAVLAAGLPETVPGVQINRFCASGLEAVNLAAAKVRSGWDDLVIAGGVESMS 122
Query: 170 VNPM-----AWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRK 224
PM AW +++P +P G++++ +A ++G +R++ D AV+S ++
Sbjct: 123 RVPMGSDGGAW--AMDPST----NFPTYFVPQGISADLIATKYGFSREDVDAYAVESQQR 176
Query: 225 AAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTI-SVDDGIRPNTSVSELAKLKPVFKKD 283
AAAA A G F ++PV D+ +TI D+ +RP T++ LAKLKP F
Sbjct: 177 AAAAWAEGYFAKSVVPVK---------DQNGLTILDHDEHMRPGTTMESLAKLKPSFAMM 227
Query: 284 GTT---------------------TAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRT 322
G AGNSS + DGA AVL+ GL
Sbjct: 228 GEMGGFDAVALQKYPEVERINHVHHAGNSSGIVDGAAAVLIGSEEAGKALGLKPRARIVA 287
Query: 323 FAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKI 382
A +G DP IM GP A A+ AGL +DDIDLFE+NEAFAS + L + +K+
Sbjct: 288 TATIGSDPTIMLTGPVPATRKALAKAGLTVDDIDLFELNEAFASVVLRFMQALDIPHDKV 347
Query: 383 NVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438
NVNGGA+A+GHPLG TGA + T+L E++RRG+ R +I++C+G GMG A + ER
Sbjct: 348 NVNGGAIAMGHPLGATGAMILGTVLDELERRGK--RTALITLCVGGGMGIATIIER 401
|
Length = 402 |
| >gnl|CDD|181146 PRK07851, PRK07851, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 290 bits (744), Expect = 3e-94
Identities = 160/417 (38%), Positives = 233/417 (55%), Gaps = 44/417 (10%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKT-NVDPSEVGDIVVGTVLAPG 109
+ VIV+ R+ + ++ +G KD PDDL A +++A ++K +DP+++ D+++G L G
Sbjct: 3 EAVIVSTARSPIGRAFKGSLKDMRPDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGG 62
Query: 110 SQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMT 169
Q + R+ A G+ +P TVNR CSS LQ AIKAG D+ I AG+E+++
Sbjct: 63 EQGFNMARVVAVLLGYD-FLPGTTVNRYCSSSLQTTRMAFHAIKAGEGDVFISAGVETVS 121
Query: 170 VNPM----AWEGSVNPKVKAFEQAQ-------------------NCLLP-----MGVTSE 201
+ + NP F +AQ + LLP MG T+E
Sbjct: 122 RFAKGNSDSLPDTKNP---LFAEAQARTAARAEGGAEAWHDPREDGLLPDVYIAMGQTAE 178
Query: 202 NVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVD 261
NVA G++R+EQD+ V S +A A A G F+ EI PV +S D
Sbjct: 179 NVAQLTGISREEQDEWGVRSQNRAEEAIANGFFEREITPVTLP---------DGTVVSTD 229
Query: 262 DGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFR 321
DG R T+ ++++LKPVF+ DGT TAGN+ ++DGA AV++M + A GL L
Sbjct: 230 DGPRAGTTYEKVSQLKPVFRPDGTVTAGNACPLNDGAAAVVIMSDTKARELGLTPLARIV 289
Query: 322 TFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEK 381
+ G+ P IMG+GP A A+ AG+ +DDIDL EINEAFA+Q + +LG+D +K
Sbjct: 290 STGVSGLSPEIMGLGPVEASKQALARAGMSIDDIDLVEINEAFAAQVLPSARELGIDEDK 349
Query: 382 INVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438
+NV+GGA+A+GHP G TGAR TLL+ + + D FG+ +MC+G G G A V ER
Sbjct: 350 LNVSGGAIALGHPFGMTGARITTTLLNNL--QTHDKTFGLETMCVGGGQGMAMVLER 404
|
Length = 406 |
| >gnl|CDD|215722 pfam00108, Thiolase_N, Thiolase, N-terminal domain | Back alignment and domain information |
|---|
Score = 283 bits (725), Expect = 2e-93
Identities = 120/269 (44%), Positives = 163/269 (60%), Gaps = 19/269 (7%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS 110
DVVIV+A RT + S G KD DL A +KA +E+ V P +V ++++G VL G
Sbjct: 1 DVVIVSAARTPI-GSFGGSLKDLSAVDLGAIAIKAALERAGVKPEDVDEVIMGNVLQAGE 59
Query: 111 QRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTV 170
+ R AA AG P++VP T+N+ C SGL+AVA A AI+AG DI + G+ESM+
Sbjct: 60 G-QNPARQAALKAGIPDSVPAVTINKVCGSGLKAVALAAQAIRAGDADIVVAGGVESMSN 118
Query: 171 NPMAWEGS-----------VNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAV 219
P S V+ +K L+ MG+T+ENVA ++G++R+EQD+ A+
Sbjct: 119 APYVLPASRVGARMGDAKLVDTMLKDGLTDAFNLIHMGITAENVAKKYGISREEQDEFAL 178
Query: 220 DSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPV 279
S +KAAAA AGKFKDEI+PV K KP+ + D+GIRP T++ LAKLKP
Sbjct: 179 RSQQKAAAAQKAGKFKDEIVPVTI-----KGRKGKPLVVDKDEGIRPGTTLESLAKLKPA 233
Query: 280 FKKD-GTTTAGNSSQVSDGAGAVLLMKRS 307
F K+ GT TAGN+S ++DGA AVLLM S
Sbjct: 234 FDKENGTVTAGNASGLNDGAAAVLLMSES 262
|
Thiolase is reported to be structurally related to beta-ketoacyl synthase (pfam00109), and also chalcone synthase. Length = 262 |
| >gnl|CDD|181311 PRK08235, PRK08235, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 284 bits (728), Expect = 4e-92
Identities = 155/402 (38%), Positives = 224/402 (55%), Gaps = 32/402 (7%)
Query: 53 VIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS-Q 111
VIV+A RT K G KD +L +K +E+ NV +V ++++GTVL G Q
Sbjct: 5 VIVSAARTPFGKFG-GSLKDVKATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQ 63
Query: 112 RASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVN 171
S R AA AG P V TVN+ C+SGL+AV I+AG + + G+ESM+
Sbjct: 64 IPS--RQAARAAGIPWEVQTETVNKVCASGLRAVTLADQIIRAGDASVIVAGGMESMSNA 121
Query: 172 PMAWEGSV------NPKVK----------AFEQAQNCLLPMGVTSENVAHRFGVTRKEQD 215
P G+ + +V AF MGV VA G++R+ QD
Sbjct: 122 PYILPGARWGYRMGDNEVIDLMVADGLTCAFSGVH-----MGVYGGEVAKELGISREAQD 176
Query: 216 QAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAK 275
+ A SH++A +A G+F++EI+PV + + GD P+ ++ D+ R +T++ +LAK
Sbjct: 177 EWAYRSHQRAVSAHEEGRFEEEIVPVT---IPQRKGD--PIVVAKDEAPRKDTTIEKLAK 231
Query: 276 LKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGV 335
LKPVF K GT TAGN+ V+DGA A++LM A ++G L A+ V+
Sbjct: 232 LKPVFDKTGTITAGNAPGVNDGAAALVLMSEDRAKQEGRKPLATILAHTAIAVEAKDFPR 291
Query: 336 GPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPL 395
P AI A ++ G ++DIDLFEINEAFA+ + G+DPEK+NVNGGA+A+GHP+
Sbjct: 292 TPGYAINALLEKTGKTVEDIDLFEINEAFAAVALASTEIAGIDPEKVNVNGGAVALGHPI 351
Query: 396 GTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 437
G +GAR + TL+HE+KRRG G+ ++C G G G A + E
Sbjct: 352 GASGARIIVTLIHELKRRGGG--IGIAAICSGGGQGDAVLIE 391
|
Length = 393 |
| >gnl|CDD|181242 PRK08131, PRK08131, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 279 bits (715), Expect = 5e-90
Identities = 160/407 (39%), Positives = 225/407 (55%), Gaps = 29/407 (7%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS 110
D I R+ + G PDDL A V++ ++EK+ ++ D+++G G
Sbjct: 3 DAYIYDGLRSPFGRHA-GALASVRPDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGE 61
Query: 111 QRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTV 170
+ R A AG P TVP +TVNR C+SGL AV D A AI G D+ + G+ESM+
Sbjct: 62 DSRNVARNALLLAGLPVTVPGQTVNRLCASGLAAVIDAARAITCGEGDLYLAGGVESMSR 121
Query: 171 NPM-------AWE----------GSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKE 213
P A+ G+ P K Q N +P T +NVA FG++R++
Sbjct: 122 APFVMGKAESAFSRDAKVFDTTIGARFPNPKIVAQYGNDSMPE--TGDNVAAEFGISRED 179
Query: 214 QDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSEL 273
D+ A S K AA G F DEI P+ P+ P ++ D+ RP+++V L
Sbjct: 180 ADRFAAQSQAKYQAAKEEGFFADEITPIEV----PQGRKLPPKLVAEDEHPRPSSTVEAL 235
Query: 274 AKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIM 333
KLKP+F+ G TAGN+S ++DGA A+L+ R+ + GL + + AA GV+P IM
Sbjct: 236 TKLKPLFE-GGVVTAGNASGINDGAAALLIGSRAAGEKYGLKPMARILSSAAAGVEPRIM 294
Query: 334 GVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGL--DPEKINVNGGALAI 391
G+GP AI A+ AGL LDD+D+ EINEAFASQ + C LG+ D ++N NGGA+A+
Sbjct: 295 GIGPVEAIKKALARAGLTLDDMDIIEINEAFASQVLGCLKGLGVDFDDPRVNPNGGAIAV 354
Query: 392 GHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438
GHPLG +GAR T E++RRG+ R+ V+S+CIG G G A V ER
Sbjct: 355 GHPLGASGARLALTAARELQRRGK--RYAVVSLCIGVGQGLAMVIER 399
|
Length = 401 |
| >gnl|CDD|183998 PRK13359, PRK13359, beta-ketoadipyl CoA thiolase; Provisional | Back alignment and domain information |
|---|
Score = 275 bits (706), Expect = 1e-88
Identities = 160/411 (38%), Positives = 220/411 (53%), Gaps = 37/411 (9%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEK-TNVDPSEVGDIVVGTVLAPG 109
+ I A RT + + G DDL A LKA++E+ +VD + + D++ G G
Sbjct: 3 EAFICDAIRTPIGRYG-GALSSVRADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAG 61
Query: 110 SQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMT 169
+ RM+ AG P VP T+NR C SG+ AV A AIK+G + I G+ESM+
Sbjct: 62 EDNRNVARMSLLLAGLPHGVPGSTINRLCGSGMDAVGVAARAIKSGEAALMIAGGVESMS 121
Query: 170 VNP--------------------MAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGV 209
P + W VNP +K + M T+ENVA + V
Sbjct: 122 RAPFVMGKAESAFSRQAEIFDTTIGWR-FVNPLMKQ----LYGVDSMPETAENVATDYNV 176
Query: 210 TRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTS 269
+R +QD A+ S +KAA A A G EI+PV + K GD P+ +S D+ R T+
Sbjct: 177 SRADQDAFALRSQQKAARAQADGTLAQEIVPVT---IPQKKGD--PLVVSRDEHPRE-TT 230
Query: 270 VSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVD 329
+ LAKLK V + DGT TAGN+S V+DGA A+LL + A R GL A GV+
Sbjct: 231 LEALAKLKGVVRPDGTVTAGNASGVNDGACALLLASEAAARRHGLKPRARVLGIATAGVE 290
Query: 330 PAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGL--DPEKINVNGG 387
P +MG+GPA A + G+ LD D+ E+NEAFASQ + +LGL D ++N NGG
Sbjct: 291 PRVMGIGPAPATQKLLARLGMTLDQFDVIELNEAFASQGLAVLRELGLADDDARVNPNGG 350
Query: 388 ALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438
A+A+GHPLG +GAR V T L++++R G RF + +MCIG G G A ER
Sbjct: 351 AIALGHPLGASGARLVTTALYQLERTGG--RFALCTMCIGVGQGIAIAIER 399
|
Length = 400 |
| >gnl|CDD|181123 PRK07801, PRK07801, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 272 bits (697), Expect = 1e-87
Identities = 148/408 (36%), Positives = 216/408 (52%), Gaps = 55/408 (13%)
Query: 54 IVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRA 113
IV A RT + K ++GG +P DL A VLK ++++T +DP+ V D++ G V G Q
Sbjct: 6 IVDAVRTPVGK-RKGGLAGVHPADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAG 64
Query: 114 SECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPM 173
+ R + AG PE VP TV+RQC S QA+ A A+ +G D+ + G+++M+ P+
Sbjct: 65 NIARTSWLAAGLPEEVPGVTVDRQCGSSQQAIHFAAQAVMSGTQDLVVAGGVQNMSQIPI 124
Query: 174 AWEGSVNPKVKAFEQAQNCLLPMGVT-----SENVAHRFG------------------VT 210
+ A +G T S+ HR+G ++
Sbjct: 125 S-------------SAMTAGEQLGFTSPFAESKGWLHRYGDQEVSQFRGAELIAEKWGIS 171
Query: 211 RKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSV 270
R+E ++ A++SHR+A AA AG+F +EI+PV ++VD+G R TS+
Sbjct: 172 REEMERFALESHRRAFAAIRAGRFDNEIVPVG--------------GVTVDEGPR-ETSL 216
Query: 271 SELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDP 330
++A LKP+ + G TA +SQ+SDGA AVLL R GL + G DP
Sbjct: 217 EKMAGLKPLV-EGGRLTAAVASQISDGASAVLLASERAVKRHGLTPRARIHHLSVRGDDP 275
Query: 331 AIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALA 390
M P A A++ GL +DDID+ EINEAFA + + G DP K+N NGGA+A
Sbjct: 276 VFMLTAPIPATRYALEKTGLSIDDIDVVEINEAFAPVVLAWLKETGADPAKVNPNGGAIA 335
Query: 391 IGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438
+GHPLG TGA+ + TLLHE++R G R+G+ +MC G G + ER
Sbjct: 336 LGHPLGATGAKLMTTLLHELERTGG--RYGLQTMCEGGGTANVTIIER 381
|
Length = 382 |
| >gnl|CDD|180595 PRK06504, PRK06504, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 270 bits (693), Expect = 7e-87
Identities = 150/399 (37%), Positives = 226/399 (56%), Gaps = 29/399 (7%)
Query: 54 IVAAYRTALCKSKRGG-FKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQR 112
IVAA RTA ++GG +P DL A VL A+++++ DP+ + D+++G V G Q
Sbjct: 6 IVAAARTA--GGRKGGRLAGWHPADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQA 63
Query: 113 ASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNP 172
+ R A + PE+VP +++RQC S QA+ A A+ +G DI I AG+ESMT P
Sbjct: 64 TNVARNAVLASKLPESVPGTSIDRQCGSSQQALHFAAQAVMSGTMDIVIAAGVESMTRVP 123
Query: 173 M-------AWEGSVNPKVKAFEQA-QNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRK 224
M A G + K E+ +E +A ++G+++ + D+ A+ SH++
Sbjct: 124 MGSPSTLPAKNGLGHYKSPGMEERYPGIQFSQFTGAEMMAKKYGLSKDQLDEFALQSHQR 183
Query: 225 AAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDG 284
A AAT AGKFK EI+P ++ D +VD+GIR + ++ +A +K + + G
Sbjct: 184 AIAATQAGKFKAEIVP-----LEITRADGSGEMHTVDEGIRFDATLEGIAGVKLI-AEGG 237
Query: 285 TTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGV-----FRTFAAVGVDPAIMGVGPAV 339
TA +SQ+ DGA V+ V +GL LGV +G DP IM P
Sbjct: 238 RLTAATASQICDGASGVM-----VVNERGLKALGVKPLARIHHMTVIGGDPVIMLEAPLP 292
Query: 340 AIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTG 399
A A+K AG+++DDIDL+E+NEAFAS + G DPE++NVNGGA+A+GHPLG +G
Sbjct: 293 ATERALKKAGMKIDDIDLYEVNEAFASVPLAWLKATGADPERLNVNGGAIALGHPLGASG 352
Query: 400 ARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438
+ + TL+H +K+RG+ R+G+ +MC G GM + ER
Sbjct: 353 TKLMTTLVHALKQRGK--RYGLQTMCEGGGMANVTIVER 389
|
Length = 390 |
| >gnl|CDD|181145 PRK07850, PRK07850, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 269 bits (690), Expect = 2e-86
Identities = 149/395 (37%), Positives = 215/395 (54%), Gaps = 22/395 (5%)
Query: 53 VIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQR 112
VIV A RT + K + G + +LL V +AV+++ +DP +V ++ G V G Q
Sbjct: 5 VIVEAVRTPIGK-RNGWLSGLHAAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQS 63
Query: 113 ASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNP 172
+ R A +AG P V T++ QC S QA VA I AG D+GI G+E+M+ P
Sbjct: 64 NNITRTAWLHAGLPYHVGATTIDCQCGSAQQANHLVAGLIAAGAIDVGIACGVEAMSRVP 123
Query: 173 M---AWEGSVNPKVKAFEQAQNCLLPMG---VTSENVAHRFGVTRKEQDQAAVDSHRKAA 226
+ A G P+ +++ + M +E +A R G+TR++ D + S R+AA
Sbjct: 124 LGANAGPGRGLPRPDSWD------IDMPNQFEAAERIAKRRGITREDVDAFGLRSQRRAA 177
Query: 227 AATAAGKFKDEIIPVATKIVDPK---TGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKD 283
A A G+F EI PV ++D + TG+ + VT D G+R +T++ LA LKPV +
Sbjct: 178 QAWAEGRFDREISPVQAPVLDEEGQPTGETRLVT--RDQGLR-DTTMEGLAGLKPVL-EG 233
Query: 284 GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPA 343
G TAG SSQ+SDGA AVL M A GL A VG +P GP A
Sbjct: 234 GIHTAGTSSQISDGAAAVLWMDEDRARALGLRPRARIVAQALVGAEPYYHLDGPVQATAK 293
Query: 344 AVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCV 403
++ AG+++ DIDL EINEAFAS + D +K+NVNGGA+A+GHP+G+TGAR +
Sbjct: 294 VLEKAGMKIGDIDLVEINEAFASVVLSWAQVHEPDMDKVNVNGGAIALGHPVGSTGARLI 353
Query: 404 ATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438
T LHE++R + +I+MC G + + ER
Sbjct: 354 TTALHELERTDK--STALITMCAGGALSTGTIIER 386
|
Length = 387 |
| >gnl|CDD|215347 PLN02644, PLN02644, acetyl-CoA C-acetyltransferase | Back alignment and domain information |
|---|
Score = 263 bits (674), Expect = 5e-84
Identities = 143/405 (35%), Positives = 218/405 (53%), Gaps = 31/405 (7%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVL-----KAVIEKTNVDPSEVGDIVVGTV 105
DV IV RT + GGF + L A L +A +E+ VDP+ V ++ G V
Sbjct: 2 DVCIVGVARTPI-----GGFLGSL-SSLSATELGSIAIQAALERAGVDPALVQEVFFGNV 55
Query: 106 LAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGL 165
L+ +A R AA AG P + TVN+ C+SG++AV A +I+ G D+ + G+
Sbjct: 56 LSANLGQAP-ARQAALGAGLPPSTICTTVNKVCASGMKAVMLAAQSIQLGINDVVVAGGM 114
Query: 166 ESMTVNPMAWEGSVNPKVKAFEQAQNCLL-----------PMGVTSENVAHRFGVTRKEQ 214
ESM+ P + + + +L MGV +E A ++ ++R+EQ
Sbjct: 115 ESMSNAPKYLPEARKGSRLGHDTVVDGMLKDGLWDVYNDFGMGVCAELCADQYSISREEQ 174
Query: 215 DQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELA 274
D A+ S+ +A AA AG F EI+PV P V + D+G+ +L
Sbjct: 175 DAYAIQSYERAIAAQEAGAFAWEIVPVEV----PGGRGRPSVIVDKDEGLGKFDPA-KLR 229
Query: 275 KLKPVFKKD-GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIM 333
KL+P FK+D G+ TAGN+S +SDGA A++L+ A+ GL ++ R +A P +
Sbjct: 230 KLRPSFKEDGGSVTAGNASSISDGAAALVLVSGEKALELGLQVIAKIRGYADAAQAPELF 289
Query: 334 GVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGH 393
PA+AIP A+K AGL+ +D +EINEAF+ + + LGLDPEK+NV+GGA+++GH
Sbjct: 290 TTAPALAIPKALKHAGLEASQVDYYEINEAFSVVALANQKLLGLDPEKVNVHGGAVSLGH 349
Query: 394 PLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438
P+G +GAR + TLL ++ + ++GV +C G G +A V E
Sbjct: 350 PIGCSGARILVTLLGVLRSKNG--KYGVAGICNGGGGASAIVVEL 392
|
Length = 394 |
| >gnl|CDD|168632 PRK06633, PRK06633, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 262 bits (670), Expect = 2e-83
Identities = 144/405 (35%), Positives = 231/405 (57%), Gaps = 38/405 (9%)
Query: 52 VVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQ 111
V I A RTA S G T L A ++K +++ + +DP+ V ++++G V+ GS
Sbjct: 5 VYITHAKRTAF-GSFMGSLSTTPAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSG 63
Query: 112 RASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMT-- 169
+ + R +AG P+ VP T+N+ C SGL++VA A +I G +I I G E+M+
Sbjct: 64 Q-NPARQTLIHAGIPKEVPGYTINKVCGSGLKSVALAANSIMTGDNEIVIAGGQENMSLG 122
Query: 170 -----------------VNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRK 212
V+ M ++G + F MG+T+EN++ +F ++R+
Sbjct: 123 MHGSYIRAGAKFGDIKMVDLMQYDGLTDVFSGVF---------MGITAENISKQFNISRQ 173
Query: 213 EQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSE 272
EQD+ A+ SH+KAA A AG FKDEI+P+ I + D+ +RP+TS+
Sbjct: 174 EQDEFALSSHKKAAKAQLAGIFKDEILPIEVTI------KKTTSLFDHDETVRPDTSLEI 227
Query: 273 LAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAI 332
L+KL+P F K+G TAGN+S ++DGA ++++ + L L ++A+ GVDP+I
Sbjct: 228 LSKLRPAFDKNGVVTAGNASSINDGAACLMVVSEEALKKHNLTPLARIVSYASAGVDPSI 287
Query: 333 MGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIG 392
MG P A A+ AG ++D+++ E+NEAFA+Q +Y ++ D EK+N+NGGA+AIG
Sbjct: 288 MGTAPVPASQKALSKAGWSVNDLEVIEVNEAFAAQSIYVNREMKWDMEKVNINGGAIAIG 347
Query: 393 HPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 437
HP+G +G R + TL+H ++R + G++++CIG GMG A E
Sbjct: 348 HPIGASGGRVLITLIHGLRR--AKAKKGLVTLCIGGGMGMAMCVE 390
|
Length = 392 |
| >gnl|CDD|181265 PRK08170, PRK08170, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 260 bits (667), Expect = 1e-82
Identities = 159/437 (36%), Positives = 232/437 (53%), Gaps = 62/437 (14%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS 110
V IV RT K+ RGG DL +A++ + P ++ ++++G P
Sbjct: 4 PVYIVDGARTPFLKA-RGGPGPFSASDLAVAAGRALLNRQPFAPDDLDEVILGCA-MPSP 61
Query: 111 QRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTV 170
A+ R+ A G E VP TV R C+SG+QA+ AA I G D+ + G+E+M+
Sbjct: 62 DEANIARVVALRLGCGEKVPAWTVQRNCASGMQALDSAAANIALGRADLVLAGGVEAMSH 121
Query: 171 NPMAWEG-------------SVNPKVKAFEQAQN-----------------CLLPMGVTS 200
P+ + S+ K+ A + + L MG T+
Sbjct: 122 APLLFSEKMVRWLAGWYAAKSIGQKLAALGKLRPSYLAPVIGLLRGLTDPVVGLNMGQTA 181
Query: 201 ENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISV 260
E +AHRFG+TR++ D A SH++ AAA A G+ K E++P+ + D K D
Sbjct: 182 EVLAHRFGITREQMDAYAARSHQRLAAAQAEGRLK-EVVPLFDR--DGKFYDH------- 231
Query: 261 DDGIRPNTSVSELAKLKPVF-KKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGV 319
DDG+RP++S+ +LAKLKP F + G TAGNSSQ++DGA +LL + GLP LG
Sbjct: 232 DDGVRPDSSMEKLAKLKPFFDRPYGRVTAGNSSQITDGACWLLLASEEAVKKYGLPPLGR 291
Query: 320 FRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFV---------- 369
+DP+ MG+GP A ++ GL L+D+DL+EINEAFA+Q +
Sbjct: 292 IVDSQWAALDPSQMGLGPVHAATPLLQRHGLTLEDLDLWEINEAFAAQVLACLAAWADEE 351
Query: 370 YCRNKLGL-------DPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVI 422
YCR +LGL D E++NV+GGA+A+GHP+G +GAR V LLH +KRRG + G+
Sbjct: 352 YCREQLGLDGALGELDRERLNVDGGAIALGHPVGASGARIVLHLLHALKRRG--TKRGIA 409
Query: 423 SMCIGTGMGAAAVFERG 439
++CIG G G A + ER
Sbjct: 410 AICIGGGQGGAMLLERV 426
|
Length = 426 |
| >gnl|CDD|181597 PRK08963, fadI, 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Score = 254 bits (651), Expect = 4e-80
Identities = 150/436 (34%), Positives = 220/436 (50%), Gaps = 58/436 (13%)
Query: 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAP 108
GD + IV+ RT K + F DL V+ ++ ++ +DP + +V G V+
Sbjct: 4 GDRIAIVSGLRTPFAK-QATAFHGIPAVDLGKMVVGELLARSEIDPELIEQLVFGQVV-Q 61
Query: 109 GSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESM 168
+ + R G +V+R C++ QAVA+VA +I AG DIGI G +S
Sbjct: 62 MPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAESIMAGTIDIGIAGGADSS 121
Query: 169 TVNP-------------MAWEGSVNPKVKAFEQAQ-NCLLP-------------MGVTSE 201
+V P + ++ ++K F + + LLP MG T+E
Sbjct: 122 SVLPIGVSKKLARALVDLNKARTLGQRLKLFSRLRLRDLLPVPPAVAEYSTGLRMGDTAE 181
Query: 202 NVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVD 261
+A +G++R+EQD A SH+ AA A A GK DE V T V P + D
Sbjct: 182 QMAKTYGISREEQDALAHRSHQLAAQAWAEGKLDDE---VMTAHVPPYKQ-----PLEED 233
Query: 262 DGIRPNTSVSELAKLKPVF-KKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVF 320
+ IR ++++ + AKL+P F +K GT TA NS+ ++DGA AVLLM S A GL LG
Sbjct: 234 NNIRGDSTLEDYAKLRPAFDRKHGTVTAANSTPLTDGAAAVLLMSESRAKALGLTPLGYL 293
Query: 321 RTFAAVGVDP-AIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFV---------- 369
R++A +D M +GPA A P A++ AGL L D+ L +++EAFA+Q +
Sbjct: 294 RSYAFAAIDVWQDMLLGPAYATPLALERAGLTLADLTLIDMHEAFAAQTLANLQMFASER 353
Query: 370 YCRNKLG-------LDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVI 422
+ R KLG +D K NV GG++A GHP TGAR + LHE++RRG G+
Sbjct: 354 FAREKLGRSQAIGEVDMSKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGG--LGLT 411
Query: 423 SMCIGTGMGAAAVFER 438
+ C G+GAA V E
Sbjct: 412 TACAAGGLGAAMVLEV 427
|
Length = 428 |
| >gnl|CDD|180659 PRK06690, PRK06690, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 243 bits (623), Expect = 9e-77
Identities = 137/387 (35%), Positives = 206/387 (53%), Gaps = 34/387 (8%)
Query: 53 VIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQR 112
VIV A RT + K K G KD L AP+L + + E+ D+++G V+ PG
Sbjct: 4 VIVEAKRTPIGK-KNGMLKDYEVQQLAAPLLTFLSKGM---EREIDDVILGNVVGPGGNV 59
Query: 113 ASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNP 172
A R++A AG +P T++RQC +GL+A+ I+ G I G+ES + +P
Sbjct: 60 A---RLSALEAGLGLHIPGVTIDRQCGAGLEAIRTACHFIQGGAGKCYIAGGVESTSTSP 116
Query: 173 MAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAG 232
+P+ MGV +E VA R+ +TR+ QD+ A S+++ A G
Sbjct: 117 FQNRARFSPETIGDPD-------MGVAAEYVAERYNITREMQDEYACLSYKRTLQALEKG 169
Query: 233 KFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSEL-AKLKPVFKKDGTTTAGNS 291
+EI+ + D+ I+ + + + KP F +GT TAGNS
Sbjct: 170 YIHEEILSFNGLL---------------DESIKKEMNYERIIKRTKPAFLHNGTVTAGNS 214
Query: 292 SQVSDGAGAVLLMKRSVAMRKGL-PILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGL 350
V+DGA AVL+M+ A + G P+L R+ A VGVDP + G GP A+ + +
Sbjct: 215 CGVNDGACAVLVMEEGQARKLGYKPVLRFVRS-AVVGVDPNLPGTGPIFAVNKLLNEMNM 273
Query: 351 QLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEM 410
+++DID FEINEAFAS+ V C +L + EK+NVNGGA+A+GHP G +GA V L ++
Sbjct: 274 KVEDIDYFEINEAFASKVVACAKELQIPYEKLNVNGGAIALGHPYGASGAMLVTRLFYQA 333
Query: 411 KRRGRDCRFGVISMCIGTGMGAAAVFE 437
KR D ++G+ ++ IG G+G A +FE
Sbjct: 334 KR--EDMKYGIATLGIGGGIGLALLFE 358
|
Length = 361 |
| >gnl|CDD|236440 PRK09268, PRK09268, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 223 bits (571), Expect = 2e-68
Identities = 149/445 (33%), Positives = 206/445 (46%), Gaps = 82/445 (18%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS 110
V I+ R +S G + D D+L L ++++ + +G++V G VL
Sbjct: 8 RVAILGGNRIPFARSN-GAYADASNQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSR 66
Query: 111 --QRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESM 168
EC + + + P T P + + C +GL+A VA I G D GI G+++
Sbjct: 67 DFNLTRECVLGSALS--PYT-PAYDLQQACGTGLEAAILVANKIALGQIDSGIAGGVDTT 123
Query: 169 TVNPMAWE-----------------------GSVNPKVKAFEQAQN----CLLPMGVTSE 201
+ P+A G + PK A E +N L MG +
Sbjct: 124 SDAPIAVNEGLRKILLELNRAKTTGDRLKALGKLRPKHLAPEIPRNGEPRTGLSMGEHAA 183
Query: 202 NVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVD 261
A +G++R+ QD+ A SH+ AAA G F D I P G + D
Sbjct: 184 ITAKEWGISREAQDELAAASHQNLAAAYDRGFFDDLITPFL--------GLTR------D 229
Query: 262 DGIRPNTSVSELAKLKPVFKK--DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGV 319
+ +RP++S+ +LAKLKPVF K T TAGNS+ ++DGA VLL A GLP+L
Sbjct: 230 NNLRPDSSLEKLAKLKPVFGKGGRATMTAGNSTPLTDGASVVLLASEEWAAEHGLPVLAY 289
Query: 320 FRTF--AAV----GVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFV---- 369
AAV G + +M PA A+P + GL L D D +EI+EAFASQ +
Sbjct: 290 LVDAETAAVDFVHGKEGLLMA--PAYAVPRLLARNGLTLQDFDFYEIHEAFASQVLATLK 347
Query: 370 ------YCRNKLGL-------DPEKINVNGGALAIGHPLGTTGARCVATL---LHEMKRR 413
YCR +LGL D K+NVNG +LA GHP TG R VATL L E K
Sbjct: 348 AWEDEEYCRERLGLDAPLGSIDRSKLNVNGSSLAAGHPFAATGGRIVATLAKLLAE-KGS 406
Query: 414 GRDCRFGVISMCIGTGMGAAAVFER 438
GR G+IS+C G G A+ ER
Sbjct: 407 GR----GLISICAAGGQGVTAILER 427
|
Length = 427 |
| >gnl|CDD|235675 PRK06025, PRK06025, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 222 bits (567), Expect = 7e-68
Identities = 142/427 (33%), Positives = 203/427 (47%), Gaps = 52/427 (12%)
Query: 51 DVVIVAAYRT--ALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAP 108
+ I+ A RT + K +G +P L A VLKA+ E+ ++ ++V DI+ T
Sbjct: 3 EAYIIDAVRTPRGIGKVGKGALAHLHPQHLAATVLKALAERNGLNTADVDDIIWSTSSQR 62
Query: 109 GSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESM 168
G Q RMAA AG+ T++R C G+ +V AA I +G D+ I G E M
Sbjct: 63 GKQGGDLGRMAALDAGYDIKASGVTLDRFCGGGITSVNLAAAQIMSGMEDLVIAGGTEMM 122
Query: 169 -----TVNPMAWEGSVNPKVKAFEQAQNCLLP---MGVTSENVAHRFGVTRKEQDQAAVD 220
G + + L P GV + +A G+TR+ D ++
Sbjct: 123 SYTAAMAAEDMAAGKPPLGMGSGNLRLRALHPQSHQGVCGDAIATMEGITREALDALGLE 182
Query: 221 SHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVF 280
S R+AA A G+F ++PV D+ V + ++ RP T+ LA LKP F
Sbjct: 183 SQRRAARAIKEGRFDKSLVPV--------YRDDGSVALDHEEFPRPQTTAEGLAALKPAF 234
Query: 281 KK-------DGTTT-------------------AGNSSQVSDGAGAVLLMKRSVAMRKGL 314
D TT AGNSS V DGA A+LL ++ A + GL
Sbjct: 235 TAIADYPLDDKGTTYRGLINQKYPDLEIKHVHHAGNSSGVVDGAAALLLASKAYAEKHGL 294
Query: 315 PILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAF---ASQFVYC 371
A +G DP +M P A + AGL DDIDL+EINEAF A +F+
Sbjct: 295 KPRARIVAMANMGDDPTLMLNAPVPAAKKVLAKAGLTKDDIDLWEINEAFAVVAEKFI-- 352
Query: 372 RNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMG 431
L LD +K+NVNGGA+A+GHP+G TG+ + T+L E++RRG + G+++MC GM
Sbjct: 353 -RDLDLDRDKVNVNGGAIALGHPIGATGSILIGTVLDELERRGL--KRGLVTMCAAGGMA 409
Query: 432 AAAVFER 438
A + ER
Sbjct: 410 PAIIIER 416
|
Length = 417 |
| >gnl|CDD|180775 PRK06954, PRK06954, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 221 bits (564), Expect = 1e-67
Identities = 143/410 (34%), Positives = 203/410 (49%), Gaps = 33/410 (8%)
Query: 45 TSVYGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGT 104
T+V D +VI +A RT + + +G F L A + A +E+ + P ++ ++V+G
Sbjct: 2 TAVDQDPIVIASAARTPMA-AFQGEFASLTAPQLGAAAIAAAVERAGLKPEQIDEVVMGC 60
Query: 105 VLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAG 164
VL P Q + R AA AG P +V TVN+ C SG++A + AG D+ + G
Sbjct: 61 VL-PAGQGQAPARQAALGAGLPLSVGCTTVNKMCGSGMRAAMFAHDMLVAGSVDVIVAGG 119
Query: 165 LESMTVNPMAWEGSVNPKVKA-----------------FEQAQNCLLPMGVTSENVAHRF 207
+ESMT P + PK + E A + MG +E A +
Sbjct: 120 MESMTNAPY-----LLPKARGGMRMGHGQVLDHMFLDGLEDAYDKGRLMGTFAEECAGEY 174
Query: 208 GVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPN 267
G TR+ QD A++S +A A G F EI PV V K GD I D+
Sbjct: 175 GFTREAQDAFAIESLARAKRANEDGSFAWEIAPVT---VAGKKGD---TVIDRDEQPF-K 227
Query: 268 TSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG 327
+ ++ LKP F K GT TA NSS +SDGA A+++M+ S A R GL L +
Sbjct: 228 ANPEKIPTLKPAFSKTGTVTAANSSSISDGAAALVMMRASTAKRLGLAPLARVVGHSTFA 287
Query: 328 VDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGG 387
P+ P AI + G + ++DLFEINEAFA + + GL EK+NVNGG
Sbjct: 288 QAPSKFTTAPVGAIRKLFEKNGWRAAEVDLFEINEAFAVVTMAAMKEHGLPHEKVNVNGG 347
Query: 388 ALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 437
A A+GHP+G +GAR + TL+ ++ RG + GV S+CIG G A E
Sbjct: 348 ACALGHPIGASGARILVTLIGALRARG--GKRGVASLCIGGGEATAMGIE 395
|
Length = 397 |
| >gnl|CDD|102340 PRK06366, PRK06366, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 211 bits (538), Expect = 5e-64
Identities = 132/402 (32%), Positives = 208/402 (51%), Gaps = 34/402 (8%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS 110
DV IV+A RTA+ K R F L +KAVI+ +DP+ V ++++G V+ G
Sbjct: 3 DVYIVSAKRTAIGKFGRS-FSKIKAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGV 61
Query: 111 QRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTV 170
+ + AA++AG P V TVN C+SG+ AV A I G D+ I G+E+M+
Sbjct: 62 GQ-NPAGQAAYHAGLPFGVTKYTVNVVCASGMLAVESAAREIMLGERDLVIAGGMENMSN 120
Query: 171 NPMAWEGSV--NPK---VKAFEQAQNCLLP----------MGVTSENVAHRFGVTRKEQD 215
P + PK K ++ L+ MGV++E A ++G+TR+ D
Sbjct: 121 APFLLPSDLRWGPKHLLHKNYKIDDAMLVDGLIDAFYFEHMGVSAERTARKYGITREMAD 180
Query: 216 QAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAK 275
+ +V S+ +A AT +G+F++EI+P + D+GIR T++ +LAK
Sbjct: 181 EYSVQSYERAIRATESGEFRNEIVPFN--------------DLDRDEGIR-KTTMEDLAK 225
Query: 276 LKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGV 335
L P F K+G TAGNS+Q+SDG A+++ GL + + + +DP
Sbjct: 226 LPPAFDKNGILTAGNSAQLSDGGSALVMASEKAINEYGLKPIARITGYESASLDPLDFVE 285
Query: 336 GPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPL 395
P A ++ +D DL E NEAF+ + R++L +D E+ NVNGGA+AIGHP+
Sbjct: 286 APIPATRKLLEKQNKSIDYYDLVEHNEAFSIASIIVRDQLKIDNERFNVNGGAVAIGHPI 345
Query: 396 GTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 437
G +G+R + TL++ +K R + G+ ++C G G E
Sbjct: 346 GNSGSRIIVTLINALKT--RHMKTGLATLCHGGGGAHTLTLE 385
|
Length = 388 |
| >gnl|CDD|145779 pfam02803, Thiolase_C, Thiolase, C-terminal domain | Back alignment and domain information |
|---|
Score = 191 bits (487), Expect = 9e-60
Identities = 76/125 (60%), Positives = 97/125 (77%), Gaps = 2/125 (1%)
Query: 314 LPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRN 373
L L R++A VGVDPAIMG+GPA AIP A+K AGL ++DIDLFEINEAFA+Q +
Sbjct: 1 LKPLARIRSYATVGVDPAIMGIGPAYAIPKALKKAGLTVNDIDLFEINEAFAAQALAVAK 60
Query: 374 KLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAA 433
LG+DPEK+NVNGGA+A+GHPLG +GAR + TLLHE+KRRG ++G+ ++CIG G G A
Sbjct: 61 DLGIDPEKVNVNGGAIALGHPLGASGARILVTLLHELKRRGG--KYGLATLCIGGGQGVA 118
Query: 434 AVFER 438
+ ER
Sbjct: 119 MIIER 123
|
Thiolase is reported to be structurally related to beta-ketoacyl synthase (pfam00109), and also chalcone synthase. Length = 123 |
| >gnl|CDD|131499 TIGR02446, FadI, fatty oxidation complex, beta subunit FadI | Back alignment and domain information |
|---|
Score = 195 bits (497), Expect = 2e-57
Identities = 136/436 (31%), Positives = 208/436 (47%), Gaps = 60/436 (13%)
Query: 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLA- 107
G+ + IVA RT + + F DL V+ ++ ++ +DP + +V G V+
Sbjct: 6 GERIAIVAGLRTPFAR-QATAFHGIPAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQM 64
Query: 108 PGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLES 167
P + + R G +V R C++ Q+ +VA +I AG DIGI G +S
Sbjct: 65 PEAPNIA--REIVLGTGMNVHTDAYSVTRACATSFQSAVNVAESIMAGAIDIGIAGGADS 122
Query: 168 MTVNPMAWEGSVN------PKVKAFEQAQNCL---------------------LPMGVTS 200
+V P+ + K + Q L MG T+
Sbjct: 123 SSVLPIGVSKKLAASLVDLNKARTLGQKLKVFSRLGLKDLMPVPPAVAEYSTGLSMGQTA 182
Query: 201 ENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISV 260
E +A +G+TR EQD A SH A+ A GK E V T P ++ I+
Sbjct: 183 EQMAKTYGITRAEQDALAHRSHTLASQAWRDGKLAGE---VMTAFPPPY---KQW--IAE 234
Query: 261 DDGIRPNTSVSELAKLKPVF-KKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGV 319
D+ IR N++++ AKL+P F +K G+ TA NS+ ++DGA AV+LM+ A G+ LG
Sbjct: 235 DNNIRHNSTLAGYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMREGRAKELGMEPLGY 294
Query: 320 FRTFAAVGVDP-AIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFV--------- 369
R++A +D M +GP+ A P A++ AGL L D+ L +++EAFA+Q +
Sbjct: 295 IRSYAFTAIDVWQDMLMGPSYATPLALQRAGLALSDLTLIDMHEAFAAQTLANVQMFASD 354
Query: 370 -YCRNKLG-------LDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGV 421
+ + LG +D K NV GG++A GHP TGAR + L E+KRRG G+
Sbjct: 355 KFAQENLGRSKAMGEIDMSKFNVLGGSIAYGHPFAATGARMITQTLRELKRRGGG--LGL 412
Query: 422 ISMCIGTGMGAAAVFE 437
+ C G+GAA + E
Sbjct: 413 NTACAAGGLGAAMILE 428
|
This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli [Fatty acid and phospholipid metabolism, Degradation]. Length = 430 |
| >gnl|CDD|238422 cd00826, nondecarbox_cond_enzymes, nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Score = 176 bits (447), Expect = 1e-50
Identities = 120/419 (28%), Positives = 170/419 (40%), Gaps = 63/419 (15%)
Query: 55 VAAYRTALCK--SKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQR 112
A TA K + G + + A + A +E V V + +G VL +
Sbjct: 1 AGAAMTAFGKFGGENGADANDLAHEAGAKAIAAALEPAGVAAGAVEEACLGQVL-GAGEG 59
Query: 113 ASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNP 172
+ + AA +AG + P +N C SGL+A+A I G + + G E M
Sbjct: 60 QNCAQQAAMHAGGLQEAPAIGMNNLCGSGLRALALAMQLIAGGDANCILAGGFEKME--- 116
Query: 173 MAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAG 232
N K K + N R D A+ A AA G
Sbjct: 117 --TSAENNAKEKHIDVLINKY---------------GMRACPDAFALAGQAGAEAAEKDG 159
Query: 233 KFKDEIIPVATKIVDPKTGDEKPVTISVDDGIR--PNTSVSELAKLKPVFKKDGTTTAGN 290
+FKDE K G + + D+ I+ S+ E+AKL+P F K+ TAGN
Sbjct: 160 RFKDEFAKFGVK------GRKGDIHSDADEYIQFGDEASLDEIAKLRPAFDKEDFLTAGN 213
Query: 291 SSQVSDGAGAVLLMKRSVAMRKGLPI-------LGVFRTFAAVGVDPA----IMGVGPAV 339
+ ++DGA A +LM + A + GL L + A+ D + G GP
Sbjct: 214 ACGLNDGAAAAILMSEAEAQKHGLQSKAREIQALEMITDMASTFEDKKVIKMVGGDGPIE 273
Query: 340 AIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEK------------------ 381
A A++ AGL + D+DL E ++AFA+ LGL PE
Sbjct: 274 AARKALEKAGLGIGDLDLIEAHDAFAANACATNEALGLCPEGQGGALVDRGDNTYGGKSI 333
Query: 382 INVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDC---RFGVISMCIGTGMGAAAVFE 437
IN NGGA+AIGHP+G +GA A L E+K G+ +CIG G GAA E
Sbjct: 334 INPNGGAIAIGHPIGASGAAICAELCFELKGEAGKRQGAGAGLALLCIGGGGGAAMCIE 392
|
There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. Length = 393 |
| >gnl|CDD|238425 cd00829, SCP-x_thiolase, Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism | Back alignment and domain information |
|---|
Score = 80.8 bits (200), Expect = 1e-16
Identities = 96/404 (23%), Positives = 147/404 (36%), Gaps = 88/404 (21%)
Query: 75 PDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTV 134
P +L A +A ++ ++P+++ +VVG Q +A Y G P V
Sbjct: 16 PLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAE-YLGLLG-KPATRV 73
Query: 135 NRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWE--GSVNPKVKAFEQAQNC 192
+SG AV AAAI +G D+ + G E M+ P E G + +
Sbjct: 74 EAAGASGSAAVRAAAAAIASGLADVVLVVGAEKMSDVPTGDEAGGRASDLEWEGPEPPGG 133
Query: 193 LLPMGVTSENVA----HRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPV----ATK 244
L P + + A HR+G TR++ + AV +HR AA A +F+ I +
Sbjct: 134 LTPPALYA-LAARRYMHRYGTTREDLAKVAVKNHRNAARNPYA-QFRKPITVEDVLNSRM 191
Query: 245 IVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLM 304
I DP + VSDGA AV+L
Sbjct: 192 IADP-------------------------------------LRLLDCCPVSDGAAAVVLA 214
Query: 305 KRSVAMRKGLP---ILGV-----FRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDID 356
A ILGV + + ++ +A A K AG+ DDID
Sbjct: 215 SEERARELTDRPVWILGVGAASDTPSLSERDDFLSLDAA--RLAARRAYKMAGITPDDID 272
Query: 357 LFEINEAFASQ-FVYCRNKLGLDPE------------------KINVNGGALAIGHPLGT 397
+ E+ + F + + LG + +N +GG L+ GHPLG
Sbjct: 273 VAELYDCFTIAELLALED-LGFCEKGEGGKLVREGDTAIGGDLPVNTSGGLLSKGHPLGA 331
Query: 398 TGARCVATLLHEMKRRG-----RDCRFGVISMCIGTGMGAAAVF 436
TG + +++ R G+ IG G G+AAV
Sbjct: 332 TGLAQAVEAVRQLRGEAGARQVPGARVGLAHN-IG-GTGSAAVV 373
|
The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. Length = 375 |
| >gnl|CDD|238201 cd00327, cond_enzymes, Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Score = 78.6 bits (194), Expect = 2e-16
Identities = 43/160 (26%), Positives = 61/160 (38%), Gaps = 12/160 (7%)
Query: 288 AGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVD----PAIMGVGPAVAIPA 343
DGA A ++ A+R+G + AA PA+ G G A A
Sbjct: 94 GSEEFVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASMVPAVSGEGLARAARK 153
Query: 344 AVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEK---INVNGGALAIGHPLGTTGA 400
A++ AGL DID E + LGLDP+ V+ + GHPLG G
Sbjct: 154 ALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGL 213
Query: 401 RCVATLLHEMKR-----RGRDCRFGVISMCIGTGMGAAAV 435
+ LL ++ R+ R ++ G AA V
Sbjct: 214 AILDELLLMLEHEFIPPTPREPRTVLLLGFGLGGTNAAVV 253
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. Length = 254 |
| >gnl|CDD|235688 PRK06064, PRK06064, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 57.6 bits (140), Expect = 4e-09
Identities = 95/444 (21%), Positives = 151/444 (34%), Gaps = 124/444 (27%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLA--- 107
DV I+ +T K G D DL +E +D ++ + VG + A
Sbjct: 3 DVAIIGVGQT-----KFGELWDVSLRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLF 57
Query: 108 -----PGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIG 162
+ + A YAG R V C+SG A+ A+ +G D+ +
Sbjct: 58 VSQEHIAA-------LIADYAGLAPIPATR-VEAACASGGAALRQAYLAVASGEADVVLA 109
Query: 163 AGLESMT--VNPMA-----------WEGSVNPKVKAFEQAQNCLLPMGVTSENVA----- 204
AG+E MT P A WE G T +
Sbjct: 110 AGVEKMTDVPTPDATEAIARAGDYEWEEF-----------------FGATFPGLYALIAR 152
Query: 205 ---HRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVD 261
H++G T ++ AV +H + A +F+ E I+V+
Sbjct: 153 RYMHKYGTTEEDLALVAVKNHYNGSKNPYA-QFQKE--------------------ITVE 191
Query: 262 DGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMR---KGLPILG 318
+ + V++ KL + S ++DGA AV+L A + I
Sbjct: 192 QVLN-SPPVADPLKLL------------DCSPITDGAAAVILASEEKAKEYTDTPVWIKA 238
Query: 319 VFRT--FAAVGVDPAIMGVGPAV-AIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKL 375
+ A+ + AV A A K AG++ DID+ E+++ F + L
Sbjct: 239 SGQASDTIALHDRKDFTTLDAAVVAAEKAYKMAGIEPKDIDVAEVHDCFTIAEILAYEDL 298
Query: 376 GLDPEK-------------------INVNGGALAIGHPLGTTGARCVATLLHEMKRRGRD 416
G +K +N +GG A GHP+G TG ++ +++
Sbjct: 299 GF-AKKGEGGKLAREGQTYIGGDIPVNPSGGLKAKGHPVGATGVSQAVEIVWQLRGEAEK 357
Query: 417 CRFGVISMCIGT-----GMGAAAV 435
R VI G G G AV
Sbjct: 358 GRQQVIGAGYGLTHNVGGTGHTAV 381
|
Length = 389 |
| >gnl|CDD|183606 PRK12578, PRK12578, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 48.7 bits (116), Expect = 4e-06
Identities = 81/369 (21%), Positives = 134/369 (36%), Gaps = 74/369 (20%)
Query: 65 SKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMA---AF 121
SK G D +L +K + V +++ +VVG+ + R E A A
Sbjct: 11 SKFGRRDDVSVQELAWESIKEALNDAGVSQTDIELVVVGST----AYRGIELYPAPIVAE 66
Query: 122 YAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESM----TVNPMAWEG 177
Y+G VP+R V C++GL A A+ +G D+ I G++ M T +A G
Sbjct: 67 YSGLTGKVPLR-VEAMCATGLAASLTAYTAVASGLVDMAIAVGVDKMTEVDTSTSLAIGG 125
Query: 178 SVNPKVKAFEQAQNCLLPMGVTSENVAH--RFGVTRKEQDQAAVDSHRKAAAATAAGKFK 235
+ P H +G T ++ +V +H+ A
Sbjct: 126 RGGNYQWEYHF-YGTTFPTYYALYATRHMAVYGTTEEQMALVSVKAHKYGA--------- 175
Query: 236 DEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVS 295
++PK +KPVT V++ ++ +S KL +S +S
Sbjct: 176 ----------MNPKAHFQKPVT--VEEVLKSRA-ISWPIKLL------------DSCPIS 210
Query: 296 DGAGAVLLMKRSVAMRKGL--PI----LGVFRTFAAVGVDPAIMGVGPAV-AIPAAVKSA 348
DG+ + + P+ +G +A V +G A A A
Sbjct: 211 DGSATAIFASEEKVKELKIDSPVWITGIGYANDYAYVARRGEWVGFKATQLAARQAYNMA 270
Query: 349 GLQLDDIDLFEINEAFASQFVYCRNKLGL-------------DPEK-----INVNGGALA 390
+ +DI++ +++AF + LG EK +N+ GG A
Sbjct: 271 KVTPNDIEVATVHDAFTIAEIMGYEDLGFTEKGKGGKFIEEGQSEKGGKVGVNLFGGLKA 330
Query: 391 IGHPLGTTG 399
GHPLG TG
Sbjct: 331 KGHPLGATG 339
|
Length = 385 |
| >gnl|CDD|223381 COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 47.6 bits (114), Expect = 8e-06
Identities = 32/121 (26%), Positives = 48/121 (39%), Gaps = 20/121 (16%)
Query: 295 SDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAG 349
+GAGA++L + A+ +G I + PA G G A+ AA+ AG
Sbjct: 231 GEGAGALVLEELEHALARGAKIYAEIVGYGTTSDAYHITAPAPDGEGAIRAMRAALADAG 290
Query: 350 LQLDDID----------LFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTG 399
L +DID + E+ A + V G + + V+ GH LG G
Sbjct: 291 LTPEDIDYINAHGTSTPANDKAESLAIKRV-----FGEHAKSLPVSSTKSLTGHTLGAAG 345
Query: 400 A 400
A
Sbjct: 346 A 346
|
Length = 412 |
| >gnl|CDD|181013 PRK07516, PRK07516, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 8e-05
Identities = 41/135 (30%), Positives = 53/135 (39%), Gaps = 32/135 (23%)
Query: 292 SQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG-------VDPAIMGVGPAVAIPAA 344
S VSDGA A++L A + FR A V DP GP A A
Sbjct: 213 SLVSDGAAALVLADAETARALQRAV--RFRARAHVNDFLPLSRRDPLAFE-GPRRAWQRA 269
Query: 345 VKSAGLQLDDIDLFEINEAF--ASQFVYCRNKLGLDPE------------------KINV 384
+ AG+ LDD+ E ++ F A Y +GL P +N
Sbjct: 270 LAQAGVTLDDLSFVETHDCFTIAELIEY--EAMGLAPPGQGARAIREGWTAKDGKLPVNP 327
Query: 385 NGGALAIGHPLGTTG 399
+GG A GHP+G TG
Sbjct: 328 SGGLKAKGHPIGATG 342
|
Length = 389 |
| >gnl|CDD|235771 PRK06289, PRK06289, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 0.001
Identities = 40/141 (28%), Positives = 61/141 (43%), Gaps = 31/141 (21%)
Query: 292 SQVSDGAGAVLLMK----RSVAMRKGLP-ILGVFRTFAAVGVDPAIMG------VGPAV- 339
SQV+DG V+L R A + +P I G A +G++ + V P V
Sbjct: 220 SQVTDGGAGVVLASDAYLRDYADARPIPRIKGWGHRTAPLGLEQKLDRSAGDPYVLPHVR 279
Query: 340 -AIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPE------------------ 380
A+ A + AG+ LDD+D FE+++ F + +GL
Sbjct: 280 QAVLDAYRRAGVGLDDLDGFEVHDCFTPSEYLAIDHIGLTGPGESWKAIENGEIAIGGRL 339
Query: 381 KINVNGGALAIGHPLGTTGAR 401
IN +GG + GHP+G +G R
Sbjct: 340 PINPSGGLIGGGHPVGASGVR 360
|
Length = 403 |
| >gnl|CDD|181327 PRK08256, PRK08256, lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 0.001
Identities = 82/375 (21%), Positives = 134/375 (35%), Gaps = 82/375 (21%)
Query: 69 GFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128
G Y D+ A +A + +D V VG V S A Y
Sbjct: 17 GASWDY-PDMAAEAGRAALADAGIDYDAVQQAYVGYVYG-----DSTSGQRALYEVGMTG 70
Query: 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMT-----------VNPMAWEG 177
+P+ VN CS+G A+ A+++G D + G E M +P+
Sbjct: 71 IPIVNVNNNCSTGSTALFLARQAVRSGAADCALALGFEQMQPGALGSVWDDRPSPLERFD 130
Query: 178 SVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDE 237
+++ F+ A L G ++G T + + V + R AA A +F+DE
Sbjct: 131 KALAELQGFDPAPPALRMFGGAGREHMEKYGTTAETFAKIGVKARRHAANNPYA-QFRDE 189
Query: 238 IIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDG 297
+++D + L +L+ + G
Sbjct: 190 Y--------------------TLEDVLASPMIWGPLTRLQ-------------CCPPTCG 216
Query: 298 AGAVLLMKRSVAMRKGLP----ILG------VFRTFAAVGVDPAIMGVGPAVAIPAAV-K 346
A A ++ A + GL I+ TF + ++G A V +
Sbjct: 217 AAAAIVCSEEFARKHGLDRAVEIVAQAMTTDTPSTFDGRSM-IDLVGYDMTRAAAQQVYE 275
Query: 347 SAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPE----------------KINVN--GGA 388
AG+ +DID+ E+++ F++ + LGL PE + VN GG
Sbjct: 276 QAGIGPEDIDVVELHDCFSANELLTYEALGLCPEGEAEKFIDDGDNTYGGRWVVNPSGGL 335
Query: 389 LAIGHPLGTTG-ARC 402
L+ GHPLG TG A+C
Sbjct: 336 LSKGHPLGATGLAQC 350
|
Length = 391 |
| >gnl|CDD|240424 PTZ00455, PTZ00455, 3-ketoacyl-CoA thiolase; Provisional | Back alignment and domain information |
|---|
Score = 40.3 bits (94), Expect = 0.002
Identities = 85/386 (22%), Positives = 137/386 (35%), Gaps = 81/386 (20%)
Query: 76 DDLLAPVLKAVIEKTNVDPSE--VGDIVVGTVL-------------APGSQRASECRMAA 120
++LLA ++ +E T +D V +VVG L A GS S A
Sbjct: 49 EELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGHLGPAAVGSLGQSGASNAL 108
Query: 121 FYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVN 180
Y P V C+SG AV A+ AG DI + G+E T G
Sbjct: 109 LYK------PAMRVEGACASGGLAVQSAWEALLAGTSDIALVVGVEVQTTVSARVGGDYL 162
Query: 181 PKVKAFEQAQN-------CLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGK 233
+ + + + CL A R ++ D+ R AA A A G
Sbjct: 163 ARAADYRRQRKLDDFTFPCLF---------AKRMKYIQEHGHFTMEDTARVAAKAYANGN 213
Query: 234 FKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQ 293
K+ + + T+ + + + P +E KP + + SQ
Sbjct: 214 -KNPLAHMHTRKLSLEF-------CTGASDKNPKFLGNE--TYKPFLRMT------DCSQ 257
Query: 294 VSDGAGAVLLMKRSVAMRKGL-----PILGVFRTFAAVG---VDP--AIMGVGPAVAIPA 343
VSDG ++L + GL ++ + A G DP A A
Sbjct: 258 VSDGGAGLVLASEEGLQKMGLSPNDSRLVEIKSLACASGNLYEDPPDATRMFTSRAAAQK 317
Query: 344 AVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGL-DPEK-----------------INVN 385
A+ AG++ D+ + E+++ F + LG+ + +N
Sbjct: 318 ALSMAGVKPSDLQVAEVHDCFTIAELLMYEALGIAEYGHAKDLIRNGATALEGRIPVNTG 377
Query: 386 GGALAIGHPLGTTGARCVATLLHEMK 411
GG L+ GHP+G TG + + + +MK
Sbjct: 378 GGLLSFGHPVGATGVKQIMEVYRQMK 403
|
Length = 438 |
| >gnl|CDD|181173 PRK07937, PRK07937, lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 0.002
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 10/112 (8%)
Query: 294 VSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMG-----VGPAVAIPAAVKSA 348
++DGA AV+L A L + T ++ +G P+ A+ AA +
Sbjct: 204 ITDGAAAVVLAAGDRARE--LRERPAWITGIEHRIESPSLGARDLTRSPSTAL-AAEAAT 260
Query: 349 GLQLDDIDLFEINEAFASQFVYCRNKLGL-DPEKINVNGGALAIGHPLGTTG 399
G +D+ E++ F Q + R LGL D K+N +GGALA +P+ G
Sbjct: 261 GGDAGGVDVAELHAPFTHQELILREALGLGDKTKVNPSGGALA-ANPMFAAG 311
|
Length = 352 |
| >gnl|CDD|238426 cd00830, KAS_III, Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems | Back alignment and domain information |
|---|
Score = 39.4 bits (93), Expect = 0.003
Identities = 45/161 (27%), Positives = 63/161 (39%), Gaps = 41/161 (25%)
Query: 295 SDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAV------AIPAAVKS- 347
SDG+GA LL + R A G DP ++ G V +P +++
Sbjct: 181 SDGSGADLLTIPAGGSR--------SPFEDAEGGDPYLVMDGREVFKFAVRLMPESIEEA 232
Query: 348 ---AGLQLDDIDLF-------EINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGT 397
AGL DDID F I EA A +LGL EK+ VN G
Sbjct: 233 LEKAGLTPDDIDWFVPHQANLRIIEAVAK-------RLGLPEEKVVVN------LDRYGN 279
Query: 398 TGARCVATLLHEMKRRGRDCRFGVISMC-IGTGM--GAAAV 435
T A + L E G+ + ++ + G G+ GAA +
Sbjct: 280 TSAASIPLALDEAIEEGKLKKGDLVLLLGFGAGLTWGAALL 320
|
It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA. Length = 320 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 462 | |||
| KOG1389 | 435 | consensus 3-oxoacyl CoA thiolase [Lipid transport | 100.0 | |
| PLN02287 | 452 | 3-ketoacyl-CoA thiolase | 100.0 | |
| PRK08242 | 402 | acetyl-CoA acetyltransferase; Validated | 100.0 | |
| PRK06025 | 417 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK07850 | 387 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK13359 | 400 | beta-ketoadipyl CoA thiolase; Provisional | 100.0 | |
| PRK09052 | 399 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK07108 | 392 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06366 | 388 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK09051 | 394 | beta-ketothiolase; Provisional | 100.0 | |
| PRK06504 | 390 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK07661 | 391 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| TIGR02445 | 385 | fadA fatty oxidation complex, beta subunit FadA. T | 100.0 | |
| PRK09050 | 401 | beta-ketoadipyl CoA thiolase; Validated | 100.0 | |
| PRK08235 | 393 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06205 | 404 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| KOG1390 | 396 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 100.0 | |
| PRK06633 | 392 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| TIGR02430 | 400 | pcaF beta-ketoadipyl CoA thiolase. Members of this | 100.0 | |
| PRK08947 | 387 | fadA 3-ketoacyl-CoA thiolase; Reviewed | 100.0 | |
| PRK08963 | 428 | fadI 3-ketoacyl-CoA thiolase; Reviewed | 100.0 | |
| PRK05656 | 393 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK08131 | 401 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| TIGR02446 | 430 | FadI fatty oxidation complex, beta subunit FadI. T | 100.0 | |
| PRK06445 | 394 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06954 | 397 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| KOG1391 | 396 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 100.0 | |
| PRK08170 | 426 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK09268 | 427 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK05790 | 393 | putative acyltransferase; Provisional | 100.0 | |
| PRK06690 | 361 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK07851 | 406 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PLN02644 | 394 | acetyl-CoA C-acetyltransferase | 100.0 | |
| PRK07801 | 382 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| cd00751 | 386 | thiolase Thiolase are ubiquitous enzymes that cata | 100.0 | |
| TIGR01930 | 386 | AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi | 100.0 | |
| COG0183 | 392 | PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis | 100.0 | |
| PRK06157 | 398 | acetyl-CoA acetyltransferase; Validated | 100.0 | |
| PRK06059 | 399 | lipid-transfer protein; Provisional | 100.0 | |
| PRK06365 | 430 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK12578 | 385 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PTZ00455 | 438 | 3-ketoacyl-CoA thiolase; Provisional | 100.0 | |
| PRK08256 | 391 | lipid-transfer protein; Provisional | 100.0 | |
| cd00826 | 393 | nondecarbox_cond_enzymes nondecarboxylating conden | 100.0 | |
| PRK06289 | 403 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK08313 | 386 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK07516 | 389 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06064 | 389 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| cd00829 | 375 | SCP-x_thiolase Thiolase domain associated with ste | 100.0 | |
| PRK06065 | 392 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06066 | 385 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK06158 | 384 | thiolase; Provisional | 100.0 | |
| KOG1392 | 465 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 100.0 | |
| PRK08142 | 388 | acetyl-CoA acetyltransferase; Provisional | 100.0 | |
| PRK07937 | 352 | lipid-transfer protein; Provisional | 100.0 | |
| PRK07855 | 386 | lipid-transfer protein; Provisional | 100.0 | |
| PF00108 | 264 | Thiolase_N: Thiolase, N-terminal domain; InterPro: | 100.0 | |
| PRK08257 | 498 | acetyl-CoA acetyltransferase; Validated | 100.0 | |
| KOG1406 | 408 | consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44 | 100.0 | |
| PF02803 | 123 | Thiolase_C: Thiolase, C-terminal domain; InterPro: | 99.98 | |
| cd00327 | 254 | cond_enzymes Condensing enzymes; Family of enzymes | 99.96 | |
| TIGR03150 | 407 | fabF beta-ketoacyl-acyl-carrier-protein synthase I | 99.96 | |
| PRK07314 | 411 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.96 | |
| PRK06333 | 424 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.95 | |
| PTZ00050 | 421 | 3-oxoacyl-acyl carrier protein synthase; Provision | 99.95 | |
| PRK14691 | 342 | 3-oxoacyl-(acyl carrier protein) synthase II; Prov | 99.94 | |
| cd00825 | 332 | decarbox_cond_enzymes decarboxylating condensing e | 99.94 | |
| PLN02836 | 437 | 3-oxoacyl-[acyl-carrier-protein] synthase | 99.93 | |
| PRK08722 | 414 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.93 | |
| KOG1394 | 440 | consensus 3-oxoacyl-(acyl-carrier-protein) synthas | 99.93 | |
| COG0304 | 412 | FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Li | 99.92 | |
| smart00825 | 424 | PKS_KS Beta-ketoacyl synthase. The structure of be | 99.92 | |
| cd00834 | 406 | KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) | 99.92 | |
| PLN02787 | 540 | 3-oxoacyl-[acyl-carrier-protein] synthase II | 99.92 | |
| COG0332 | 323 | FabH 3-oxoacyl-[acyl-carrier-protein] | 99.92 | |
| PRK07103 | 410 | polyketide beta-ketoacyl:acyl carrier protein synt | 99.92 | |
| PRK07910 | 418 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.91 | |
| PRK05952 | 381 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.91 | |
| cd00828 | 407 | elong_cond_enzymes "elongating" condensing enzymes | 99.9 | |
| PRK06501 | 425 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.9 | |
| PRK09116 | 405 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.89 | |
| cd00832 | 399 | CLF Chain-length factor (CLF) is a factor required | 99.89 | |
| PRK08439 | 406 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.89 | |
| PRK06519 | 398 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.89 | |
| cd00833 | 421 | PKS polyketide synthases (PKSs) polymerize simple | 99.88 | |
| PRK06147 | 348 | 3-oxoacyl-(acyl carrier protein) synthase; Validat | 99.88 | |
| CHL00203 | 326 | fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr | 99.88 | |
| PRK07967 | 406 | 3-oxoacyl-(acyl carrier protein) synthase I; Revie | 99.87 | |
| PLN02326 | 379 | 3-oxoacyl-[acyl-carrier-protein] synthase III | 99.86 | |
| PRK09352 | 319 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.86 | |
| TIGR00748 | 345 | HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase | 99.85 | |
| PRK07204 | 329 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.85 | |
| PRK09258 | 338 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.85 | |
| TIGR00747 | 318 | fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | 99.85 | |
| PRK12879 | 325 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.84 | |
| PRK06816 | 378 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.84 | |
| cd00830 | 320 | KAS_III Ketoacyl-acyl carrier protein synthase III | 99.84 | |
| PRK04262 | 347 | hypothetical protein; Provisional | 99.83 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 99.83 | |
| PRK12880 | 353 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.82 | |
| cd00827 | 324 | init_cond_enzymes "initiating" condensing enzymes | 99.82 | |
| PRK07515 | 372 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.82 | |
| PRK05963 | 326 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.8 | |
| PRK06840 | 339 | hypothetical protein; Validated | 99.79 | |
| PRK09185 | 392 | 3-oxoacyl-(acyl carrier protein) synthase I; Revie | 99.78 | |
| cd00831 | 361 | CHS_like Chalcone and stilbene synthases; plant-sp | 99.77 | |
| COG3321 | 1061 | Polyketide synthase modules and related proteins [ | 99.74 | |
| PLN03169 | 391 | chalcone synthase family protein; Provisional | 99.73 | |
| PLN03171 | 399 | chalcone synthase-like protein; Provisional | 99.71 | |
| PLN03168 | 389 | chalcone synthase; Provisional | 99.67 | |
| PLN02854 | 521 | 3-ketoacyl-CoA synthase | 99.67 | |
| PLN03170 | 401 | chalcone synthase; Provisional | 99.67 | |
| PLN03172 | 393 | chalcone synthase family protein; Provisional | 99.67 | |
| PLN03173 | 391 | chalcone synthase; Provisional | 99.64 | |
| TIGR01835 | 379 | HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synt | 99.64 | |
| PLN02377 | 502 | 3-ketoacyl-CoA synthase | 99.63 | |
| TIGR02845 | 327 | spore_V_AD stage V sporulation protein AD. Bacillu | 99.59 | |
| PLN02932 | 478 | 3-ketoacyl-CoA synthase | 99.54 | |
| COG3425 | 377 | PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi | 99.54 | |
| PLN02577 | 459 | hydroxymethylglutaryl-CoA synthase | 99.54 | |
| PLN02192 | 511 | 3-ketoacyl-CoA synthase | 99.52 | |
| PRK08304 | 337 | stage V sporulation protein AD; Validated | 99.51 | |
| TIGR01833 | 454 | HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synth | 99.36 | |
| PLN00415 | 466 | 3-ketoacyl-CoA synthase | 99.31 | |
| PRK12404 | 334 | stage V sporulation protein AD; Provisional | 99.3 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 99.18 | |
| PF00109 | 254 | ketoacyl-synt: Beta-ketoacyl synthase, N-terminal | 99.16 | |
| COG3424 | 356 | BcsA Predicted naringenin-chalcone synthase [Secon | 99.07 | |
| PF08392 | 290 | FAE1_CUT1_RppA: FAE1/Type III polyketide synthase- | 98.55 | |
| PF07451 | 329 | SpoVAD: Stage V sporulation protein AD (SpoVAD); I | 98.33 | |
| PF02801 | 119 | Ketoacyl-synt_C: Beta-ketoacyl synthase, C-termina | 98.33 | |
| PF08541 | 90 | ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC | 98.24 | |
| PF00195 | 226 | Chal_sti_synt_N: Chalcone and stilbene synthases, | 98.09 | |
| PF01154 | 174 | HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A s | 98.04 | |
| COG0183 | 392 | PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis | 98.02 | |
| PF08545 | 80 | ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP) | 97.16 | |
| PF08392 | 290 | FAE1_CUT1_RppA: FAE1/Type III polyketide synthase- | 95.53 | |
| PLN02932 | 478 | 3-ketoacyl-CoA synthase | 94.78 | |
| cd00327 | 254 | cond_enzymes Condensing enzymes; Family of enzymes | 94.02 | |
| PLN02377 | 502 | 3-ketoacyl-CoA synthase | 93.88 | |
| PLN02192 | 511 | 3-ketoacyl-CoA synthase | 93.82 | |
| PRK06158 | 384 | thiolase; Provisional | 93.31 | |
| PLN02854 | 521 | 3-ketoacyl-CoA synthase | 93.07 | |
| PF00195 | 226 | Chal_sti_synt_N: Chalcone and stilbene synthases, | 92.29 | |
| PF08541 | 90 | ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC | 92.0 | |
| PLN03169 | 391 | chalcone synthase family protein; Provisional | 91.76 | |
| PRK08313 | 386 | acetyl-CoA acetyltransferase; Provisional | 91.73 | |
| PLN03168 | 389 | chalcone synthase; Provisional | 91.08 | |
| PRK07855 | 386 | lipid-transfer protein; Provisional | 91.0 | |
| PLN03173 | 391 | chalcone synthase; Provisional | 90.9 | |
| PF13723 | 218 | Ketoacyl-synt_2: Beta-ketoacyl synthase, N-termina | 90.51 | |
| PLN03170 | 401 | chalcone synthase; Provisional | 90.5 | |
| COG3424 | 356 | BcsA Predicted naringenin-chalcone synthase [Secon | 90.38 | |
| PRK06065 | 392 | acetyl-CoA acetyltransferase; Provisional | 90.36 | |
| PLN03171 | 399 | chalcone synthase-like protein; Provisional | 90.23 | |
| PLN00415 | 466 | 3-ketoacyl-CoA synthase | 90.16 | |
| PRK06365 | 430 | acetyl-CoA acetyltransferase; Provisional | 89.83 | |
| PRK12404 | 334 | stage V sporulation protein AD; Provisional | 89.16 | |
| PLN03172 | 393 | chalcone synthase family protein; Provisional | 89.16 | |
| PRK06816 | 378 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 88.76 | |
| PRK08142 | 388 | acetyl-CoA acetyltransferase; Provisional | 88.41 | |
| PRK07204 | 329 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 88.25 | |
| PRK12880 | 353 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 88.02 | |
| PRK05963 | 326 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 87.74 | |
| PRK12578 | 385 | acetyl-CoA acetyltransferase; Provisional | 87.47 | |
| PF02801 | 119 | Ketoacyl-synt_C: Beta-ketoacyl synthase, C-termina | 87.43 | |
| PRK06840 | 339 | hypothetical protein; Validated | 87.34 | |
| COG0332 | 323 | FabH 3-oxoacyl-[acyl-carrier-protein] | 87.04 | |
| PF02797 | 151 | Chal_sti_synt_C: Chalcone and stilbene synthases, | 86.51 | |
| TIGR00748 | 345 | HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase | 86.36 | |
| cd00751 | 386 | thiolase Thiolase are ubiquitous enzymes that cata | 85.77 | |
| PRK08304 | 337 | stage V sporulation protein AD; Validated | 85.75 | |
| PRK04262 | 347 | hypothetical protein; Provisional | 85.63 | |
| PRK09258 | 338 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 85.35 | |
| PRK06059 | 399 | lipid-transfer protein; Provisional | 85.06 | |
| TIGR02845 | 327 | spore_V_AD stage V sporulation protein AD. Bacillu | 85.04 | |
| PRK08257 | 498 | acetyl-CoA acetyltransferase; Validated | 85.03 | |
| KOG1393 | 462 | consensus Hydroxymethylglutaryl-CoA synthase [Lipi | 84.86 | |
| cd00825 | 332 | decarbox_cond_enzymes decarboxylating condensing e | 84.23 | |
| cd00827 | 324 | init_cond_enzymes "initiating" condensing enzymes | 83.15 | |
| TIGR00747 | 318 | fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | 83.0 | |
| PRK06366 | 388 | acetyl-CoA acetyltransferase; Provisional | 82.77 | |
| PRK06157 | 398 | acetyl-CoA acetyltransferase; Validated | 82.76 | |
| PRK08170 | 426 | acetyl-CoA acetyltransferase; Provisional | 82.47 | |
| cd00829 | 375 | SCP-x_thiolase Thiolase domain associated with ste | 82.18 | |
| TIGR01930 | 386 | AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi | 81.75 | |
| PRK07515 | 372 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 81.43 | |
| PRK12879 | 325 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 81.19 | |
| PRK06066 | 385 | acetyl-CoA acetyltransferase; Provisional | 81.15 | |
| COG1214 | 220 | Inactive homolog of metal-dependent proteases, put | 80.8 | |
| cd00831 | 361 | CHS_like Chalcone and stilbene synthases; plant-sp | 80.61 | |
| PRK09185 | 392 | 3-oxoacyl-(acyl carrier protein) synthase I; Revie | 80.33 |
| >KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-103 Score=746.02 Aligned_cols=434 Identities=81% Similarity=1.257 Sum_probs=415.5
Q ss_pred HHHHHHHHHhhcCCCCCCCCcchhhhhhcccccCcchhhcccCCCCCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHH
Q 012506 4 AINRQQVLLEHLRPSNSSSHNYESILSASACAAGDSAAYHRTSVYGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVL 83 (462)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~ 83 (462)
||+|+|.|..||.++.. ...++.++|-.+++.+|+ +|||||++.|||++|+++|.|+|+.++||+..++
T Consensus 1 ~~er~~~ll~hl~~~s~-----s~~~~a~~c~s~~~~~~~------~DVViVaa~RTaicka~rG~fkdt~pDeLl~~vl 69 (435)
T KOG1389|consen 1 AMERQQVLLRHLRPSSS-----SASLSASACLSGDSAASA------EDVVIVAALRTAICKAKRGGFKDTRPDELLAAVL 69 (435)
T ss_pred CchHHHHHHHhcCCccc-----ccccccccccccCccccc------cCEEEEeeccchhhhcccCCcccCChHHHHHHHH
Confidence 58899999999987543 456777888878877665 8999999999999999999999999999999999
Q ss_pred HHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEE
Q 012506 84 KAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGA 163 (462)
Q Consensus 84 ~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~ 163 (462)
+..+++.+++|++|++|++|+++.++. +...+|+.+++.|+|.++|+.+||++|+||++|+...+..|++|.||++|++
T Consensus 70 ~a~ie~t~~dp~~igdi~vG~vL~pg~-ga~e~R~a~~~ag~P~tvpv~tvNRqCsSGLqaVadiA~~Ir~G~ydIGla~ 148 (435)
T KOG1389|consen 70 RAVIEKTNLDPSLIGDIVVGTVLAPGS-GASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADIAAKIRAGFYDIGLAA 148 (435)
T ss_pred HHHHhhcCCCHHHhcceeeeeccCCCc-chHHHHHHHHHcCCCcccchhhhhhhhhhHHHHHHHHHHHHhcCceeeeccc
Confidence 999999999999999999999999998 6888999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCC-CCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccce
Q 012506 164 GLESMTVN-PMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVA 242 (462)
Q Consensus 164 G~E~ms~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~ 242 (462)
|+|+|+.. |..|...+.+......++.+|+.|||+++|+++++||+||++||++|+.||++|++|.+.|+|++||+|++
T Consensus 149 GvESMt~~~~~g~~g~~~~~~~~~~~A~dCllpmGitsEnva~rfgvsR~eqD~~Av~S~kkAa~A~~~G~f~dEIiPv~ 228 (435)
T KOG1389|consen 149 GVESMTTNYPRGWPGSINPRLQKFEKARDCLLPMGITSENVAERFGVSREEQDEAAVDSHKKAAAATAKGKFKDEIIPVK 228 (435)
T ss_pred chhhhcccCCCCCccccChhhhhhhHHhhcccccccchHHHHHHhCCChhhhhHHHHHHHHHHHHHhhcCcchhheeeee
Confidence 99999976 56677778888888899999999999999999999999999999999999999999999999999999999
Q ss_pred ecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEE
Q 012506 243 TKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRT 322 (462)
Q Consensus 243 ~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g 322 (462)
+++.||+ +.+++++++.|||+|+.+|+++|.+++|+|.+||++|.+|+||++|||+||+||+++.|.++|+|+++.+..
T Consensus 229 tkv~D~~-g~~k~i~v~~DeGiRp~ttl~~l~klkpvFkkdGttTagNsSQvSDGa~aVLLmkRs~A~qlgLPvlgvfr~ 307 (435)
T KOG1389|consen 229 TKVVDPK-GDEKPITVSVDEGIRPNTTLESLAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMQLGLPVLGVFRD 307 (435)
T ss_pred eeccCCc-CCccceeEecCCCCCCCcchhHHhhcchhhhcCCccccCchhhcccchhhhhhhhhhhHhhcCCceeEEeee
Confidence 9999999 788999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHH
Q 012506 323 FAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARC 402 (462)
Q Consensus 323 ~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~ 402 (462)
+...+++|++||+||+.||+++|+.+||+.+|||+|||||+|++|.+||.++|||++++||++||++++|||+||||+|+
T Consensus 308 f~~vGv~P~iMGiGPavAIp~alk~aGL~v~did~FEINEAFAsQ~~yc~~KL~ld~ekVN~~GGaiAlGHPlGatGAR~ 387 (435)
T KOG1389|consen 308 FAAVGVPPAIMGIGPAVAIPKALKAAGLEVDDIDLFEINEAFASQALYCRNKLGLDPEKVNVNGGAIALGHPLGATGARC 387 (435)
T ss_pred eeeecCCHHHcCCCchhhhHHHHHHcCCcccccceeehhHHHHHHHHHHHHHhCCCHHHcCCCCceeeccCCcCCccHhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEecccccccccccc
Q 012506 403 VATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFERGDCADELCNVRK 450 (462)
Q Consensus 403 ~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~~~~~~~~~~~~~ 450 (462)
+++++++||+++.++++|+++||+|+|||+|.+|+++...+++++.|+
T Consensus 388 VaTlL~emKrrgkd~~~GVvSmCIGtGmGaAAvFer~~~~d~~~~~~~ 435 (435)
T KOG1389|consen 388 VATLLHEMKRRGKDCRFGVVSMCIGTGMGAAAVFERGGGVDELDNARK 435 (435)
T ss_pred HHHHHHHHHhhccccccceEEEeecCCcchheeeecCCCCchhhhccC
Confidence 999999999999888999999999999999999999999999988774
|
|
| >PLN02287 3-ketoacyl-CoA thiolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-85 Score=683.25 Aligned_cols=452 Identities=87% Similarity=1.329 Sum_probs=402.0
Q ss_pred ChHHHHHHHHHHhhcCCCCCCCCcchhhhhhcccccCcchhhcccCCCCCcEEEEEeeecccccCCCCCCCCCCHHHHHH
Q 012506 1 MEKAINRQQVLLEHLRPSNSSSHNYESILSASACAAGDSAAYHRTSVYGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLA 80 (462)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~ 80 (462)
|+++.+|.+.|+.||+++.+. +..|..+.|.++++++|+|+..+.++|+|||++||||+|.++|.+++.++.||+.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~V~IVG~grTpfgk~~~g~~~~~s~~eLa~ 76 (452)
T PLN02287 1 MEKAINRQRVLLRHLRPSSSE----PSSLSASACAAGDSAAYHRTTAFGDDVVIVAAYRTPICKAKRGGFKDTYPDDLLA 76 (452)
T ss_pred CchHHHHHHHHHhhccCCCCC----ccccccccccccchhhhccccCCCCCEEEEEeecCCCccCCCCCcCCCCHHHHHH
Confidence 788999999999999875431 5578899999999999999999999999999999999985468888999999999
Q ss_pred HHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEE
Q 012506 81 PVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG 160 (462)
Q Consensus 81 ~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~v 160 (462)
+|+++||+++|+++++||.+++|++.+...+.++.++.++..+|++...|+++|+++|+||++|+..|+++|++|.+|+|
T Consensus 77 eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl~~~~pa~~V~~~CaSG~~Ai~~Aa~~I~sG~~dvv 156 (452)
T PLN02287 77 PVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIG 156 (452)
T ss_pred HHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCCCCCcceEEEeccCchHHHHHHHHHHHHHcCCCCeE
Confidence 99999999999999999999999987665534567788999999976689999999999999999999999999999999
Q ss_pred EEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 012506 161 IGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIP 240 (462)
Q Consensus 161 Lv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p 240 (462)
||+|+|+||..|..+...+.+.+.......+...+||+++++|+++||++||+||+|+++||+||.+|+++|+|++||+|
T Consensus 157 Lv~GvE~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~y~~~yGitrE~la~vAvksh~nAa~np~ag~f~~ei~p 236 (452)
T PLN02287 157 IGAGVESMTTNPMAWEGGVNPRVESFSQAQDCLLPMGITSENVAERFGVTREEQDQAAVESHRKAAAATASGKFKDEIVP 236 (452)
T ss_pred EEEeEEecCCCchhhccccCchhhccccccccCcCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceee
Confidence 99999999987643322222211111000122357999999999999999999999999999999999999999999999
Q ss_pred ceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEE
Q 012506 241 VATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVF 320 (462)
Q Consensus 241 ~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i 320 (462)
|.+..++++.+..++++++.||.+|+.++.|+|.+++|+|+|+|++|.+|||+++|||+++||++++.|++++.+|++++
T Consensus 237 v~~~~~~~~~~~~~~~~~~~De~~r~~~~~e~l~~l~~v~~~~g~lt~~~~s~~sDGAaalvl~see~A~~~~~~~~a~~ 316 (452)
T PLN02287 237 VHTKIVDPKTGEEKPIVISVDDGIRPNTTLADLAKLKPVFKKNGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPILGVF 316 (452)
T ss_pred eeccccccccCCccceeecccCCCCCCCCHHHHhcCCCccCCCCCEeccccCCcCCceEEEEEeeHHHHHHCCCCeEEEE
Confidence 98753223323333457899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHH
Q 012506 321 RTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGA 400 (462)
Q Consensus 321 ~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~ 400 (462)
.++...+.+|..++.++..+++++|+++||+++|||++|+||+|++++++++|.|||+++|||++||++++|||+||||+
T Consensus 317 ~~~~~~~~~~~~~~~~~~~A~~~al~~Agl~~~DID~~Ei~daFa~~~l~~~e~lG~~~~pvN~sGG~la~GHp~gAsG~ 396 (452)
T PLN02287 317 RSFAAVGVDPAVMGIGPAVAIPAAVKAAGLELDDIDLFEINEAFASQFVYCCKKLGLDPEKVNVNGGAIALGHPLGATGA 396 (452)
T ss_pred EEEeeccCCCccchHHHHHHHHHHHHHcCCCHHHCCEEEecchHHHHHHHHHHHcCCCccccCCCCcHHhccCcHHHHHH
Confidence 99988778888888888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEecccccccccccccccccc
Q 012506 401 RCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFERGDCADELCNVRKVESNNF 456 (462)
Q Consensus 401 ~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~~~~~~~~~~~~~~~~~~~ 456 (462)
++++++++||++++++.++||+++|+|||+|.|+|||+.+..++..+.|||++||+
T Consensus 397 ~~v~~l~~qL~~~~~~~~~gl~~~c~ggG~g~a~~ie~~~~~~~~~~~~~~~~~~~ 452 (452)
T PLN02287 397 RCVATLLHEMKRRGKDCRFGVVSMCIGTGMGAAAVFERGDSVDELSNARKVEGNNL 452 (452)
T ss_pred HHHHHHHHHHHhcCCCCCeeEEEEccccCceeEEEEEecCchhhhhhcccccCCCC
Confidence 99999999999875434799999999999999999999999999999999999995
|
|
| >PRK08242 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-79 Score=626.74 Aligned_cols=376 Identities=41% Similarity=0.653 Sum_probs=342.0
Q ss_pred CcEEEEEeeecccccC-CCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCC
Q 012506 50 DDVVIVAAYRTALCKS-KRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~-~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~ 128 (462)
++||||++.||||+|. +.|.|++.++.||+.+|++++|+++|+++++||.+++|++++...++.+.++.++..+|+|.+
T Consensus 2 ~~v~Iv~~~RTp~g~~~~~g~l~~~~~~dLa~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl~~~ 81 (402)
T PRK08242 2 TEAYIYDAVRTPRGKGKKDGSLHEVKPVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPET 81 (402)
T ss_pred CcEEEEecccCCCccCCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCCCCC
Confidence 5799999999999984 579999999999999999999999999999999999999988665457889999999999878
Q ss_pred cceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCC-CCChhhhhhhhh-hcccccHHHHHHHHHHH
Q 012506 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEG-SVNPKVKAFEQA-QNCLLPMGVTSENVAHR 206 (462)
Q Consensus 129 ~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~-~~~~~~~~~~~~-~~~~~~~g~~a~~~~~~ 206 (462)
+|+++||++|+||++||..|+++|++|.+|++|++|+|+||+.|+.... .+ +.+.... .....+||.++++|+++
T Consensus 82 ~pa~~Vn~aCaSg~~Ai~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~~~~~---~~~~~~~~~~~~~~mg~~Ae~~a~~ 158 (402)
T PRK08242 82 VPGVQINRFCASGLEAVNLAAAKVRSGWDDLVIAGGVESMSRVPMGSDGGAW---AMDPSTNFPTYFVPQGISADLIATK 158 (402)
T ss_pred CCeEEEcchhhhHHHHHHHHHHHHHcCCCCEEEEEEEEccCCCcccccCccc---ccCcccccccccCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998852211 11 0011011 11235799999999999
Q ss_pred hCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC----
Q 012506 207 FGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK---- 282 (462)
Q Consensus 207 ~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p---- 282 (462)
||||||+||+|+++||+||.+|+++|+|++||+||+. ++ + .+++++|+++|+++|+|+|.++||+|+|
T Consensus 159 ~gisRe~~d~~A~~Sh~~A~~A~~~g~f~~ei~pv~~----~~-~---~~~~~~de~~r~~~t~e~l~~l~p~f~~~~~~ 230 (402)
T PRK08242 159 YGFSREDVDAYAVESQQRAAAAWAEGYFAKSVVPVKD----QN-G---LTILDHDEHMRPGTTMESLAKLKPSFAMMGEM 230 (402)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeec----CC-C---CEeeCCCCCCCCCCCHHHHhCCCCCccCcccc
Confidence 9999999999999999999999999999999999972 21 1 2468999999999999999999999988
Q ss_pred CC-----------------CcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHH
Q 012506 283 DG-----------------TTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAV 345 (462)
Q Consensus 283 ~g-----------------~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL 345 (462)
+| ++|.+|+|+++|||+|+||+++++|++++++|+++|+|++..+.+|..++.++..+++++|
T Consensus 231 ~g~~~~~~~~~~~~~~~~~~vTagn~s~~~DGAaAlvl~s~e~A~~~g~~p~a~I~g~~~~~~~~~~~~~~~~~a~~~al 310 (402)
T PRK08242 231 GGFDAVALQKYPEVERINHVHHAGNSSGIVDGAAAVLIGSEEAGKALGLKPRARIVATATIGSDPTIMLTGPVPATRKAL 310 (402)
T ss_pred CcccccccccccccccccCceecCcCCCCCCceEEEEEecHHHHHHcCCCCcEEEEEEEEecCCchhhcccHHHHHHHHH
Confidence 44 5899999999999999999999999999999999999999999999888899999999999
Q ss_pred HHcCCCCCCccEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEee
Q 012506 346 KSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC 425 (462)
Q Consensus 346 ~~AGl~~~DID~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~ 425 (462)
+++||+++|||+||+||+|+++++.++|.||++++|+|++||++++|||+||||+++++++++||+++++ ++||+++|
T Consensus 311 ~~AGl~~~DID~~ei~daFa~~~l~~~e~lG~~~~~vN~~GG~la~GHP~GAsG~~~~~~l~~~L~~~~~--~~g~~~~c 388 (402)
T PRK08242 311 AKAGLTVDDIDLFELNEAFASVVLRFMQALDIPHDKVNVNGGAIAMGHPLGATGAMILGTVLDELERRGK--RTALITLC 388 (402)
T ss_pred HHcCCCHHHCCEEEecchhhHHHHHHHHHhCCCCcCCCcCCCHHhcCCcHHHHHHHHHHHHHHHHHhcCC--CeEEEEEc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999877 99999999
Q ss_pred cccceeEEEEEEe
Q 012506 426 IGTGMGAAAVFER 438 (462)
Q Consensus 426 ~G~G~g~A~v~~~ 438 (462)
+|||+|.|+|||+
T Consensus 389 ~ggG~g~a~~~e~ 401 (402)
T PRK08242 389 VGGGMGIATIIER 401 (402)
T ss_pred ccCCceeEEEEEe
Confidence 9999999999997
|
|
| >PRK06025 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-77 Score=615.27 Aligned_cols=379 Identities=36% Similarity=0.533 Sum_probs=344.9
Q ss_pred CcEEEEEeeecccc--cCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCC
Q 012506 50 DDVVIVAAYRTALC--KSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE 127 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~--~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~ 127 (462)
++||||++.||||+ |.++|.|++.++.+|+..+++++|+++++++++||.|++|++++.+.+++|++|++++.+|||.
T Consensus 2 ~~vvIv~~~RTp~g~~~~~~G~l~~~~~~~L~~~~~~~~l~r~~i~~~~id~vi~G~~~~~g~~g~n~aR~~al~aglp~ 81 (417)
T PRK06025 2 AEAYIIDAVRTPRGIGKVGKGALAHLHPQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGYDI 81 (417)
T ss_pred CceEEEeeccCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEcCCCcCcccCcHHHHHHHhCCCCC
Confidence 47999999999998 7447999999999999999999999999999999999999998877657899999999999999
Q ss_pred CcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCC---C-CCChhhhhhh-hh-hc--ccccHHHH
Q 012506 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWE---G-SVNPKVKAFE-QA-QN--CLLPMGVT 199 (462)
Q Consensus 128 ~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~---~-~~~~~~~~~~-~~-~~--~~~~~g~~ 199 (462)
++|+++||+.|+||++||..++++|++|++|++|++|+|+||+.|+.+. . ...+.+.+.. .. .+ ...+||.+
T Consensus 82 ~vp~~tvnr~C~Sgl~ai~~aa~~I~~G~~~~~laGG~EsmS~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Mg~~ 161 (417)
T PRK06025 82 KASGVTLDRFCGGGITSVNLAAAQIMSGMEDLVIAGGTEMMSYTAAMAAEDMAAGKPPLGMGSGNLRLRALHPQSHQGVC 161 (417)
T ss_pred CCCeeeeccccchHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCcccccccccCCCCcccccccCcccccccCCCCHHHH
Confidence 9999999999999999999999999999999999999999999986221 0 1111111110 00 11 23589999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCc
Q 012506 200 SENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPV 279 (462)
Q Consensus 200 a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~ 279 (462)
+|+++++||||||+||+||+.||++|.+|+++|+|++||+||+. ++ ..+++++||++|+++|+|.|.++||+
T Consensus 162 ae~~a~~~~isRe~~D~~A~~Sh~rA~~A~~~G~f~~eIvPv~~----~~----~~~~~~~De~~R~~~t~e~la~L~p~ 233 (417)
T PRK06025 162 GDAIATMEGITREALDALGLESQRRAARAIKEGRFDKSLVPVYR----DD----GSVALDHEEFPRPQTTAEGLAALKPA 233 (417)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEeeEEc----CC----CCEEecCCCCCCCCCCHHHHcCCCCC
Confidence 99999999999999999999999999999999999999999972 11 12468999999999999999999999
Q ss_pred cc--------CCCC------------------cccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCC
Q 012506 280 FK--------KDGT------------------TTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIM 333 (462)
Q Consensus 280 f~--------p~g~------------------~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~ 333 (462)
|+ ++|+ +|.+|+|+++|||+|+||+++++|++++++|+++|++++..+.+|..+
T Consensus 234 F~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~vTagNss~~sDGAAAvVL~See~A~~lg~~p~a~I~g~~~a~~~p~~~ 313 (417)
T PRK06025 234 FTAIADYPLDDKGTTYRGLINQKYPDLEIKHVHHAGNSSGVVDGAAALLLASKAYAEKHGLKPRARIVAMANMGDDPTLM 313 (417)
T ss_pred ccccccccccCCccccccccccccccccccccccccccCCCCcceEEEEEecHHHHHHcCCCCcEEEEEEEEecCCchhh
Confidence 97 5787 899999999999999999999999999999999999999999999988
Q ss_pred CccHHHHHHHHHHHcCCCCCCccEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhc
Q 012506 334 GVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 413 (462)
Q Consensus 334 ~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~ 413 (462)
+.++..+++++|+++|++++|||+||+||+|+.+.+.+++.||++++|+|++||++++|||+|+||+++++++++||+++
T Consensus 314 ~~~p~~Ai~~aL~~AGl~~~DID~~ei~eaFa~~~l~~~~~lg~~~~~vN~~GG~ia~GHp~GaTGa~~v~~ll~qL~~~ 393 (417)
T PRK06025 314 LNAPVPAAKKVLAKAGLTKDDIDLWEINEAFAVVAEKFIRDLDLDRDKVNVNGGAIALGHPIGATGSILIGTVLDELERR 393 (417)
T ss_pred cccHHHHHHHHHHHcCCCHHHCcEEEEchHHHHHHHHHHHHcCCChhhccccCCHHhcCCchhHHHHHHHHHHHHHHHHh
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCCcEEEEEeecccceeEEEEEEe
Q 012506 414 GRDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 414 ~~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
++ ++||+++|+|||+|.|+|||+
T Consensus 394 g~--~~Gl~~~c~~GG~g~A~lle~ 416 (417)
T PRK06025 394 GL--KRGLVTMCAAGGMAPAIIIER 416 (417)
T ss_pred CC--CeEEEEEEeeccceeEEEEEe
Confidence 76 899999999999999999997
|
|
| >PRK07850 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-77 Score=614.95 Aligned_cols=379 Identities=37% Similarity=0.546 Sum_probs=342.1
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
++|+|+|++||||+| +.|.+++.++.||+.++++++|+++|+++++||.+++|++.+...++.+++|.+++.+|+|.++
T Consensus 2 ~~V~Ivg~~rTpfgk-~~g~~~~~~~~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl~~~~ 80 (387)
T PRK07850 2 GNPVIVEAVRTPIGK-RNGWLSGLHAAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGLPYHV 80 (387)
T ss_pred CcEEEEecccCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCCCCCC
Confidence 579999999999998 5788999999999999999999999999999999999998865554578899999999998789
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCC--CCChhhhhhhhhhcccccHHHHHHHHHHHh
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEG--SVNPKVKAFEQAQNCLLPMGVTSENVAHRF 207 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~ 207 (462)
|+++|+++|+||++|+..|+++|++|++|++|++|+|+||+.|+.... .........++ .....|+.++++|+++|
T Consensus 81 p~~tV~~~CaSG~~A~~~A~~~I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~~~--~~~~~m~~~ae~~~~~y 158 (387)
T PRK07850 81 GATTIDCQCGSAQQANHLVAGLIAAGAIDVGIACGVEAMSRVPLGANAGPGRGLPRPDSWD--IDMPNQFEAAERIAKRR 158 (387)
T ss_pred ceEEEecccccHHHHHHHHHHHHHCCCCCEEEEEeEecCCCCcccccccccccCccccccc--cCcchHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999988742111 11000000011 11235778999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecc---c-CCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCC
Q 012506 208 GVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKI---V-DPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKD 283 (462)
Q Consensus 208 gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~---~-np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~ 283 (462)
|+|||+||+|+++||+||.+|+++|+|++||+||+++. + ||+++.+ +++.||.+| ++|+|+|.+++|+| ++
T Consensus 159 gisre~~d~~a~~sh~~a~~A~~~g~f~~ei~pv~~~~~~~~~np~~~~~---~~~~D~~~r-~~t~e~l~~l~p~~-~~ 233 (387)
T PRK07850 159 GITREDVDAFGLRSQRRAAQAWAEGRFDREISPVQAPVLDEEGQPTGETR---LVTRDQGLR-DTTMEGLAGLKPVL-EG 233 (387)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeEeecccccccccCCCce---EeecCCCcc-cCCHHHhccCCCCC-CC
Confidence 99999999999999999999999999999999998763 3 8888653 589999999 99999999999999 67
Q ss_pred CCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCC
Q 012506 284 GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEA 363 (462)
Q Consensus 284 g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eihda 363 (462)
|.+|.+|||+++|||+|+||++++.|++++.+|.++|.+++..+.+|..+..++..+++++|+++||+++|||++|+||+
T Consensus 234 ~~~t~~~~~~~sDGAaa~vl~see~A~~l~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~~ei~d~ 313 (387)
T PRK07850 234 GIHTAGTSSQISDGAAAVLWMDEDRARALGLRPRARIVAQALVGAEPYYHLDGPVQATAKVLEKAGMKIGDIDLVEINEA 313 (387)
T ss_pred CCccchhcCCcCCceEEEEEecHHHHHHcCCCCcEEEEEEEEeccCchhhcchHHHHHHHHHHHcCCCHHHcCeeeeccc
Confidence 77899999999999999999999999999999989999999888888888888999999999999999999999999999
Q ss_pred CHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEe
Q 012506 364 FASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 364 fa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
|+++++.++|.||++.+|||++||++++|||+|+||+++++|+++||+++++ ++||+++|+|||+|.|++||+
T Consensus 314 F~~~~l~~~e~lg~~~~pvN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~~~--~~g~~~~c~~gg~g~a~~~e~ 386 (387)
T PRK07850 314 FASVVLSWAQVHEPDMDKVNVNGGAIALGHPVGSTGARLITTALHELERTDK--STALITMCAGGALSTGTIIER 386 (387)
T ss_pred chHHHHHHHHHcCCCCCCcCCCCchhhcCCCcchhHHHHHHHHHHHHHhcCC--CeEEEEEccccCceeEEEEEe
Confidence 9999999999999999999999999999999999999999999999999877 999999999999999999997
|
|
| >PRK13359 beta-ketoadipyl CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-76 Score=610.80 Aligned_cols=380 Identities=40% Similarity=0.601 Sum_probs=342.5
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHH-cCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCC
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEK-TNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~-agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~ 128 (462)
.+|||+|++||||+| ++|.+++.++.+|+.++++++|++ +++++++||.+++|++.+.+.++.+++|.+++.+|+|.+
T Consensus 2 ~~v~Ivg~~rTpfgk-~~g~~~~~~~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~~Gl~~~ 80 (400)
T PRK13359 2 TEAFICDAIRTPIGR-YGGALSSVRADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGLPHG 80 (400)
T ss_pred CcEEEEeccCCCccC-CCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCC
Confidence 479999999999998 679999999999999999999996 699999999999999987665468999999999999988
Q ss_pred cceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCC--C-CC--Chhhhh-h-------h--hhhccc
Q 012506 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWE--G-SV--NPKVKA-F-------E--QAQNCL 193 (462)
Q Consensus 129 ~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~--~-~~--~~~~~~-~-------~--~~~~~~ 193 (462)
+|+++|+++|+||++|+..|+++|++|++|++|++|+|+||+.|+.+. . .+ ...+.+ . + ......
T Consensus 81 vp~~tV~~~CaSG~~Av~~A~~~I~sG~~divlagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (400)
T PRK13359 81 VPGSTINRLCGSGMDAVGVAARAIKSGEAALMIAGGVESMSRAPFVMGKAESAFSRQAEIFDTTIGWRFVNPLMKQLYGV 160 (400)
T ss_pred CceEEEeccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCccccccccccccCCcccccccccccccCCcccccccc
Confidence 999999999999999999999999999999999999999999885211 1 11 111111 0 0 011123
Q ss_pred ccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHH
Q 012506 194 LPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSEL 273 (462)
Q Consensus 194 ~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l 273 (462)
.+||.++|+++++||||||+||+|+++||+++..++..|+|++||+||+++. + . ...++++.||.+|+ +|+|+|
T Consensus 161 ~~mg~~ae~~a~~~gisre~~d~~a~~Sh~~a~~a~~~g~~~~ei~pv~~~~--~-~--~~~~~~~~De~~r~-~t~e~l 234 (400)
T PRK13359 161 DSMPETAENVATDYNVSRADQDAFALRSQQKAARAQADGTLAQEIVPVTIPQ--K-K--GDPLVVSRDEHPRE-TTLEAL 234 (400)
T ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhcCCCccceeeeeecc--C-C--CCceeecCCCCCCC-CCHHHH
Confidence 5799999999999999999999999999999999999999999999998742 1 1 12257899999998 999999
Q ss_pred hcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCC
Q 012506 274 AKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLD 353 (462)
Q Consensus 274 ~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~ 353 (462)
.+++|+|+|+|++|.+|+|+++|||+++||+++++|++++.+|+++|++++..+.+|+.++.++..+++++|+++||+++
T Consensus 235 ~~l~p~f~~~g~lT~~n~~~~~DGAaa~vL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~A~~~al~~AGl~~~ 314 (400)
T PRK13359 235 AKLKGVVRPDGTVTAGNASGVNDGACALLLASEAAARRHGLKPRARVLGIATAGVEPRVMGIGPAPATQKLLARLGMTLD 314 (400)
T ss_pred hcCCCccCCCCceecccccCccCceEEEEEecHHHHHHCCCCccEEEEEEEEecCCCCccchhHHHHHHHHHHHhCCCHH
Confidence 99999999999999999999999999999999999999999999999999998888988888999999999999999999
Q ss_pred CccEEEecCCCHHHHHHHHHHcCCCC--CCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeeccccee
Q 012506 354 DIDLFEINEAFASQFVYCRNKLGLDP--EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMG 431 (462)
Q Consensus 354 DID~~eihdafa~~~~~~~e~LGl~~--~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g 431 (462)
|||++|+||+|+++++.++|.||+++ .|+|++||.+++|||+||||+++++++++||+++++ ++||+++|+|||+|
T Consensus 315 DID~iei~dafa~~~l~~~e~lg~~~~~~pvN~~GG~la~GHp~gasG~~~v~e~~~qL~~~~~--~~g~~~~c~~gG~g 392 (400)
T PRK13359 315 QFDVIELNEAFASQGLAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVTTALYQLERTGG--RFALCTMCIGVGQG 392 (400)
T ss_pred HcCcCccCcHhHHHHHHHHHHcCCCCCCCCEECCCchhhcCCchhHHHHHHHHHHHHHHhhcCC--CeEEEEEcccCCce
Confidence 99999999999999999999999964 699999999999999999999999999999999887 99999999999999
Q ss_pred EEEEEEe
Q 012506 432 AAAVFER 438 (462)
Q Consensus 432 ~A~v~~~ 438 (462)
.|+|||+
T Consensus 393 ~a~~ie~ 399 (400)
T PRK13359 393 IAIAIER 399 (400)
T ss_pred eEEEEEe
Confidence 9999997
|
|
| >PRK09052 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-76 Score=607.17 Aligned_cols=391 Identities=48% Similarity=0.720 Sum_probs=346.3
Q ss_pred CCCCCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHc-CCCccccCcEEEEeccCCCCccccHHHHHHHHcC
Q 012506 46 SVYGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKT-NVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAG 124 (462)
Q Consensus 46 ~~~~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~a-gl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~G 124 (462)
.+.|++|+|||++||||+|.+.|.|++.++.||+.+|++++|+++ |+++++||.+++|++.++..++.+.++.+...+|
T Consensus 2 ~~~m~~v~Ivg~~rTpfg~~~~g~~~~~s~~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~G 81 (399)
T PRK09052 2 SKQLQDAYIVAATRTPVGKAPRGMFKNTRPDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAG 81 (399)
T ss_pred CCCCCcEEEEEeccCCcccCCCCCCCCCCHHHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHcC
Confidence 455688999999999999744688999999999999999999997 9999999999999988776545778888888899
Q ss_pred CCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCC-CCCChhhhhhhhhhcccccHHHHHHHH
Q 012506 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWE-GSVNPKVKAFEQAQNCLLPMGVTSENV 203 (462)
Q Consensus 125 lp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~a~~~ 203 (462)
+|..+|+++|+++|+||++|+..|+++|++|++|+||++|+|+||+.|+... ......+.+..........|++++++|
T Consensus 82 l~~~~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 161 (399)
T PRK09052 82 LPNSVGGVTVNRFCASGLQAVAMAADRIRVGEADVMIAAGVESMSMVPMMGNKPSMSPAIFARDENVGIAYGMGLTAEKV 161 (399)
T ss_pred CCCCCceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccccCcccCcccccCcchhccCCcccccchHHHHHHHH
Confidence 9756899999999999999999999999999999999999999998774111 011111111110111124799999999
Q ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCC----CCCCCceEEeccCCCCCCCCHHHHhcCCCc
Q 012506 204 AHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPK----TGDEKPVTISVDDGIRPNTSVSELAKLKPV 279 (462)
Q Consensus 204 ~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~----a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~ 279 (462)
+++||+|||+||+|+++||+||.+|+++|+|++||+|+++....|. ..+..+.++..|+++|+++|+|.|.+++|+
T Consensus 162 ~~~ygitre~~d~~a~~sh~~a~~n~~ag~~~~ei~~~~v~~~~~~~~~~~~~~~~~~~~~D~~~r~~~~~e~l~~l~p~ 241 (399)
T PRK09052 162 AEQWKVSREDQDAFALESHQKAIAAQQAGEFKDEITPYEITERFPDLATGEVDVKTRTVDLDEGPRADTSLEGLAKLKPV 241 (399)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeEeccccccccccCcccccceEeccCCCCCCCCCHHHHhcCCCc
Confidence 9999999999999999999999999999999999999976432121 111133568999999999999999999999
Q ss_pred ccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccEEE
Q 012506 280 FKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFE 359 (462)
Q Consensus 280 f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~e 359 (462)
|+|+|++|.+|||+++|||+++||+++++|++++.+|+++|++++..+.+|..++.++..|++++|+++||+++|||++|
T Consensus 242 f~~~g~lt~~n~s~~~DGAaa~vl~se~~a~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~A~~~al~~Agi~~~did~~e 321 (399)
T PRK09052 242 FANKGSVTAGNSSQTSDGAGAVILVSEKALKQFNLTPLARFVSFAVAGVPPEIMGIGPIEAIPAALKQAGLKQDDLDWIE 321 (399)
T ss_pred cCCCCcEECCccCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEeccCCCccchhHHHHHHHHHHHcCCCHHHcCEEE
Confidence 99889999999999999999999999999999999999999999999999998888999999999999999999999999
Q ss_pred ecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEe
Q 012506 360 INEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 360 ihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
+||+|+++++.++|.||++++|+|++||++++|||+|+||+++++++++||+++++ ++||+++|+|||+|.|+|||+
T Consensus 322 i~D~f~~~~l~~~e~lg~~~~~vN~~GG~la~GHp~gasG~~~~~~~~~~L~~~~~--~~g~~~~c~~gg~g~a~~~e~ 398 (399)
T PRK09052 322 LNEAFAAQSLAVIRDLGLDPSKVNPLGGAIALGHPLGATGAIRTATVVHGLRRTNL--KYGMVTMCVGTGMGAAGIFER 398 (399)
T ss_pred eCcHHHHHHHHHHHHhCCCCcccCCCCchhhcCchHHHHHHHHHHHHHHHHHhcCC--CeEEEEEcccCCceeEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999877 899999999999999999997
|
|
| >PRK07108 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-76 Score=606.92 Aligned_cols=385 Identities=45% Similarity=0.722 Sum_probs=349.9
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
++|||+|++||||+|.+.+.+++.++.+|+.+|++++|+++|+++++||.+++|++.++..++++.++.++..+|+|.++
T Consensus 2 ~~v~Ivg~~rTpfgk~~~~~l~~~~~~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~~ 81 (392)
T PRK07108 2 TEAVIVSTARTPLAKSWRGAFNMTHGATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPVTV 81 (392)
T ss_pred CcEEEEecccCCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCCCCCC
Confidence 57999999999999866788899999999999999999999999999999999999887654457999999999998679
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCC-CCChhhhhhhhhhcccccHHHHHHHHHHHhC
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEG-SVNPKVKAFEQAQNCLLPMGVTSENVAHRFG 208 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g 208 (462)
|+++|+++|+||++||+.|+++|++|++|++|++|+|+||+.|..+.. .....+.. ....+++..|+.++++++.+|+
T Consensus 82 p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vlagGvE~ms~~p~~~~~~~~~~~~~~-~~~~~~~~~m~~~ae~~a~~~~ 160 (392)
T PRK07108 82 PGMTVNRFCSSGLQTIALAAQRVIAGEGDVFVAGGVESISCVQNEMNRHMLREGWLV-EHKPEIYWSMLQTAENVAKRYG 160 (392)
T ss_pred ceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCCCcCCCcCccchhhh-ccCCccccCHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999987653221 11111110 0011223468999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCccccccceec--ccCCCCC--CCCceEEeccCCCCCCCCHHHHhcCCCcccCCC
Q 012506 209 VTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATK--IVDPKTG--DEKPVTISVDDGIRPNTSVSELAKLKPVFKKDG 284 (462)
Q Consensus 209 isre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~--~~np~a~--~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g 284 (462)
|+|++||+|+..||++|..++++|+|++||+||+.. .+||+++ +++++++++||.+|+++|+|+|.+++|+| +.|
T Consensus 161 i~r~~~d~~a~~s~~~A~~A~k~g~~~~ei~pv~~~~~~~n~~a~~~~~~~~~~~~de~~r~~~t~e~l~~l~~~~-~~g 239 (392)
T PRK07108 161 ISKERQDEYGVQSQQRAAAAQAAGRFDDEIVPITVTAGVADKATGRLFTKEVTVSADEGIRPDTTLEGVSKIRSAL-PGG 239 (392)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCcCceeeEEecccccccccCcccccceeEccCCCCCCCCCHHHHhcCCCCC-CCC
Confidence 999999999999999999999999999999999754 4689886 67778899999999999999999999999 678
Q ss_pred CcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCC
Q 012506 285 TTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAF 364 (462)
Q Consensus 285 ~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eihdaf 364 (462)
++|.+|||+++|||+++||++++.|++++.+|+++|+|++..+.+|+.++.++..|++++|+++||+++|||++|+||+|
T Consensus 240 ~lt~~n~~~~~DGAaa~vl~s~~~A~~~g~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~Did~~ei~eaf 319 (392)
T PRK07108 240 VITAGNASQFSDGASACVVMNAKVAEREGLQPLGIFRGFAVAGCEPDEMGIGPVFAVPKLLKQAGLKVDDIDLWELNEAF 319 (392)
T ss_pred CCcCCcCCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEeccCCcccchhHHHHHHHHHHHcCCCHHHcCchHhhhHH
Confidence 99999999999999999999999999999999999999999999998888899999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEe
Q 012506 365 ASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 365 a~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
++++++++|.||++++|||++||++++|||+|+||++.+++++++|+++++ ++||+++|+|||+|.|+|||+
T Consensus 320 a~~~l~~~e~lg~~~~~vN~~GG~~a~GHp~gatG~r~~~~l~~~l~~~~~--~~g~~~~c~~gg~g~a~~ie~ 391 (392)
T PRK07108 320 AVQVLYCRDTLGIPMDRLNVNGGAIAVGHPYGVSGARLTGHALIEGKRRGA--KYVVVTMCIGGGQGAAGLFEV 391 (392)
T ss_pred HHHHHHHHHhcCCCccccCCCCChHHhCcchhhhHHHHHHHHHHHHHhhCC--CEEEEEEccccChhhEEEEEe
Confidence 999999999999999999999999999999999999999999999998877 899999999999999999997
|
|
| >PRK06366 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-76 Score=609.36 Aligned_cols=371 Identities=35% Similarity=0.551 Sum_probs=334.4
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
++|+|||++||||+| +.|.+++.++.+|+.++++++|+|+||++++||.+++|++.+.+. ++++++.++..+|+|.++
T Consensus 2 ~~v~Ivg~~rTp~gr-~~g~~~~~~~~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~-~~~~a~~~~~~~Gl~~~~ 79 (388)
T PRK06366 2 KDVYIVSAKRTAIGK-FGRSFSKIKAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGV-GQNPAGQAAYHAGLPFGV 79 (388)
T ss_pred CcEEEEEcccCCccc-CCCcccCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCc-cCcHHHHHHHHCCCCCCC
Confidence 579999999999998 568888999999999999999999999999999999999876553 567788999999998678
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCC--C--C--C----Chhhhhhh--hh-hcc--cc
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWE--G--S--V----NPKVKAFE--QA-QNC--LL 194 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~--~--~--~----~~~~~~~~--~~-~~~--~~ 194 (462)
|.++++++|+||+.++..|+++|++|++|+||++|+|+||+.|+... . . . ...+.+.. .. .++ ..
T Consensus 80 p~~~v~~~caSg~~av~~Aa~~I~sG~~d~vla~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 159 (388)
T PRK06366 80 TKYTVNVVCASGMLAVESAAREIMLGERDLVIAGGMENMSNAPFLLPSDLRWGPKHLLHKNYKIDDAMLVDGLIDAFYFE 159 (388)
T ss_pred cceeeechhhHHHHHHHHHHHHHhcCCCCEEEEEeeEccccCcccccccccccccccccccchhhhhhcccCccccccCc
Confidence 99999999999999999999999999999999999999997654211 0 0 0 00011110 11 111 24
Q ss_pred cHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHh
Q 012506 195 PMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELA 274 (462)
Q Consensus 195 ~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~ 274 (462)
.|++++++|+++||+|||+||+|+++||+||.+|+++|+|++||+|+.. +++|+++| ++|+|+++
T Consensus 160 ~mal~A~~~~~~yGitrE~~a~vAv~s~~~A~~np~ag~~~~ei~p~~~--------------~~~d~~~r-~~t~e~~~ 224 (388)
T PRK06366 160 HMGVSAERTARKYGITREMADEYSVQSYERAIRATESGEFRNEIVPFND--------------LDRDEGIR-KTTMEDLA 224 (388)
T ss_pred cHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhhHhcCCcccccccccc--------------cccccCcc-cCCHHHHh
Confidence 5899999999999999999999999999999999999999999999741 56799999 79999999
Q ss_pred cCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCC
Q 012506 275 KLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDD 354 (462)
Q Consensus 275 ~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~D 354 (462)
++||+|+|+|++|.+|||+++|||+|+||+|+|+|++++.+|+++|++++..+.+|..+..++..|++++|+++||+++|
T Consensus 225 ~s~~v~~p~g~lt~~d~s~~sDGAaAvvl~See~A~~l~~~pv~~I~g~~~~~~~~~~~~~~~~~A~~~al~~Agl~~~D 304 (388)
T PRK06366 225 KLPPAFDKNGILTAGNSAQLSDGGSALVMASEKAINEYGLKPIARITGYESASLDPLDFVEAPIPATRKLLEKQNKSIDY 304 (388)
T ss_pred hCCCccCCCCCEehhhcCCcccceeEEEEecHHHHHHcCCCcCEEEEEEEEEecCHHHhcccHHHHHHHHHHHcCCCHHH
Confidence 99999999999999999999999999999999999999999999999999998888888888889999999999999999
Q ss_pred ccEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEE
Q 012506 355 IDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAA 434 (462)
Q Consensus 355 ID~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~ 434 (462)
||++|+||+|++++++++|.|||+.+|||++||++++|||+||||+++++|+++||+++++ ++||+++|+|||+|.|+
T Consensus 305 iDv~Ei~daFa~~~l~~le~lgl~g~~vN~~GG~la~GHP~GatG~~~~~~l~~qL~~~~~--~~g~~~~c~~gg~g~a~ 382 (388)
T PRK06366 305 YDLVEHNEAFSIASIIVRDQLKIDNERFNVNGGAVAIGHPIGNSGSRIIVTLINALKTRHM--KTGLATLCHGGGGAHTL 382 (388)
T ss_pred cceeeccchhHHHHHHHHHHhCCCCCccCCCCchhhhCCCcCCCHHHHHHHHHHHHHhcCC--CeEEEEEecccChhhEE
Confidence 9999999999999999999999998899999999999999999999999999999999877 99999999999999999
Q ss_pred EEEec
Q 012506 435 VFERG 439 (462)
Q Consensus 435 v~~~~ 439 (462)
|||+.
T Consensus 383 ~~e~~ 387 (388)
T PRK06366 383 TLEMV 387 (388)
T ss_pred EEEec
Confidence 99985
|
|
| >PRK09051 beta-ketothiolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-76 Score=604.35 Aligned_cols=382 Identities=44% Similarity=0.704 Sum_probs=341.4
Q ss_pred CCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCC
Q 012506 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (462)
Q Consensus 49 ~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~ 128 (462)
|++|||||++||||+| ++|.+++.++.||+.+|+++||+++|+++++||.+++|++.+...+..+.++.++..+|+|.+
T Consensus 2 m~~v~Ivg~~rtp~g~-~~g~~~~~~~~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl~~~ 80 (394)
T PRK09051 2 MREVVVVSGVRTAIGT-FGGSLKDVAPTDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQE 80 (394)
T ss_pred CCcEEEEecccCCccC-CCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCCCCC
Confidence 4689999999999998 568889999999999999999999999999999999999987654345788888899999767
Q ss_pred cceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCC-----CCCCCh-hhhhh-hhh-hcc--cccHHH
Q 012506 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAW-----EGSVNP-KVKAF-EQA-QNC--LLPMGV 198 (462)
Q Consensus 129 ~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~-----~~~~~~-~~~~~-~~~-~~~--~~~~g~ 198 (462)
+|+++|+++|+||++|+..|+++|++|.+|++||+|+|+||+.|+.. ...+.. ...+. ... .++ ...|++
T Consensus 81 ~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLvvG~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (394)
T PRK09051 81 TPAFNVNRLCGSGLQAIVSAAQAILLGDADVAIGGGAESMSRAPYLLPAARWGARMGDAKLVDMMVGALHDPFGTIHMGV 160 (394)
T ss_pred CceEEecccchHHHHHHHHHHHHHHcCCCCEEEEEeehhcccCcccccccccccccCCchhhhhhcccccccccCCCHHH
Confidence 89999999999999999999999999999999999999999876411 101100 00110 000 111 236999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCC
Q 012506 199 TSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKP 278 (462)
Q Consensus 199 ~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p 278 (462)
++++|+++||++||++|+|+++||+||.+|+++|+|++||+|+.++.+ + ..+++++|+.+|+++|+|+|.+++|
T Consensus 161 ~a~~~~~~ygitre~~d~~avksh~~A~~a~~~g~~~~ei~p~~~~~~--~----~~~~~~~da~~r~~~t~e~v~~~~~ 234 (394)
T PRK09051 161 TAENVAAKYGISREAQDALALESHRRAAAAIAAGYFKDQIVPVEIKTR--K----GEVVFDTDEHVRADTTLEDLAKLKP 234 (394)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeecCC--C----CCeEECCCCCCCCCCCHHHHcCCCC
Confidence 999999999999999999999999999999999999999999987531 1 1256899999999999999999999
Q ss_pred cccCC-CCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccE
Q 012506 279 VFKKD-GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDL 357 (462)
Q Consensus 279 ~f~p~-g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~ 357 (462)
+|+|+ |++|.+|||+++|||+++||++++.|++++.+|+++|++++..+.+|..++.++..|++++|+++||+++|||+
T Consensus 235 v~~~~~g~lt~~~~s~~~DGAaa~vl~s~~~a~~~g~~~~~~I~g~~~~~~~~~~~~~~~~~a~~~al~~agi~~~did~ 314 (394)
T PRK09051 235 VFKKENGTVTAGNASGINDGAAAVVLAEADAAEARGLKPLARLVGYAHAGVDPEYMGIGPVPATQKALERAGLTVADLDV 314 (394)
T ss_pred cccCCCccEeCCcCCCCCCceEEEEEecHHHHHHCCCCccEEEEEEEEeccCCCcccccHHHHHHHHHHHcCCCHHHcCE
Confidence 99876 89999999999999999999999999999999999999999999989888889999999999999999999999
Q ss_pred EEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEE
Q 012506 358 FEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 437 (462)
Q Consensus 358 ~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~ 437 (462)
+|+||+|+++++.+.|.||++++|||++||++++|||+||||+++++++++||+++++ +|||+++|+|||+|.|+|||
T Consensus 315 ~ei~d~f~~~~~~~~e~lg~~~~~vN~~GG~~a~Ghp~gAsG~~~~~~~~~~L~~~~~--~~g~~~~c~~gG~g~a~~~e 392 (394)
T PRK09051 315 IEANEAFAAQACAVTRELGLDPAKVNPNGSGISLGHPVGATGAIITVKALYELQRIGG--RYALVTMCIGGGQGIAAIFE 392 (394)
T ss_pred EEecCccHHHHHHHHHHhCCCccccCCCccHHHhcchHHHHHHHHHHHHHHHHHhcCC--CEEEEEEccccChhhEEEEE
Confidence 9999999999999999999999999999999999999999999999999999999877 99999999999999999999
Q ss_pred ec
Q 012506 438 RG 439 (462)
Q Consensus 438 ~~ 439 (462)
+.
T Consensus 393 ~~ 394 (394)
T PRK09051 393 RL 394 (394)
T ss_pred eC
Confidence 73
|
|
| >PRK06504 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-75 Score=602.52 Aligned_cols=380 Identities=37% Similarity=0.591 Sum_probs=338.6
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
++|||||++||||+| ++|.|++.++.||+.++++++|+++++++++||.+++|++.+...++.+.+|.+++..|||.++
T Consensus 2 ~~v~Ivg~~rTpfgk-~~g~~~~~~~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl~~~v 80 (390)
T PRK06504 2 AEAYIVAAARTAGGR-KGGRLAGWHPADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKLPESV 80 (390)
T ss_pred CceEEEEcccCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCC
Confidence 479999999999998 6799999999999999999999999999999999999999865544568899999999998899
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCC------CCChhhhh-hhhhhc-ccccHHHHHH
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEG------SVNPKVKA-FEQAQN-CLLPMGVTSE 201 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~------~~~~~~~~-~~~~~~-~~~~~g~~a~ 201 (462)
|+++|+++|+||++|+..|+++|++|++|++||+|+|+||+.|+.... .+.....+ ..+... ...+|+.+++
T Consensus 81 P~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvLagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aae 160 (390)
T PRK06504 81 PGTSIDRQCGSSQQALHFAAQAVMSGTMDIVIAAGVESMTRVPMGSPSTLPAKNGLGHYKSPGMEERYPGIQFSQFTGAE 160 (390)
T ss_pred ceEEEechhhHHHHHHHHHHHHHHCCCCCEEEEeeeeecCCCccccccccccccccccccccccccccCCCCCCHHHHHH
Confidence 999999999999999999999999999999999999999987742111 11111101 111111 1247889999
Q ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCccc
Q 012506 202 NVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFK 281 (462)
Q Consensus 202 ~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~ 281 (462)
+|+++||+|||+||+|+++||+||.+|+++|+|++||+|+++..+ . ..+..++.||++|+.+|+|+|.+++|+++
T Consensus 161 ~~a~~ygisre~~d~~A~ksh~~A~~a~~ag~f~~ei~p~~~~~~---~--~~~~~~~~De~~r~~~t~e~l~~~~~~~~ 235 (390)
T PRK06504 161 MMAKKYGLSKDQLDEFALQSHQRAIAATQAGKFKAEIVPLEITRA---D--GSGEMHTVDEGIRFDATLEGIAGVKLIAE 235 (390)
T ss_pred HHHHHhCcCHHHHHHHHHHHHHHHHHhHHcCCCccccccccccCC---C--CCceEEccCCCCCCCCCHHHHhcCCCCCC
Confidence 999999999999999999999999999999999999999987532 1 12346888999999999999999999974
Q ss_pred CCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccEEEec
Q 012506 282 KDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEIN 361 (462)
Q Consensus 282 p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eih 361 (462)
+|++|.+|||+++|||+|+||++++.|++++.+|+.++.++...+.+|..+..++..+++++|+++||+++|||++|+|
T Consensus 236 -~g~lt~~n~s~~~DGAaA~vl~s~~~A~~l~~~p~~~i~~~~~~~~~~~~~~~~~~~a~~~a~~~agl~~~Did~~Ei~ 314 (390)
T PRK06504 236 -GGRLTAATASQICDGASGVMVVNERGLKALGVKPLARIHHMTVIGGDPVIMLEAPLPATERALKKAGMKIDDIDLYEVN 314 (390)
T ss_pred -CCCCcCccCCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEEeecCchhhhccHHHHHHHHHHHcCCCHHHCCEEEec
Confidence 4899999999999999999999999999999999989999988888887888899999999999999999999999999
Q ss_pred CCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEe
Q 012506 362 EAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 362 dafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
|+|++++++++|+||||++|||++||++++|||+||||++++.++++||+++.+ ++|++++|+|||+|.++||++
T Consensus 315 d~Fa~~~l~~~e~lG~~~~pvN~~GG~la~Ghp~gatG~r~~~~l~~~lr~~~~--~~gl~~~~~ggg~g~a~ile~ 389 (390)
T PRK06504 315 EAFASVPLAWLKATGADPERLNVNGGAIALGHPLGASGTKLMTTLVHALKQRGK--RYGLQTMCEGGGMANVTIVER 389 (390)
T ss_pred ccchHHHHHHHHHhCCCCCCcCCCCcHHhcCCCcchhHHHHHHHHHHHHHhhCC--CeEEEEEeecccceeEEEEEe
Confidence 999999999999999999999999999999999999999999999999998866 999999999999999999986
|
|
| >PRK07661 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-76 Score=604.35 Aligned_cols=384 Identities=48% Similarity=0.752 Sum_probs=342.8
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
++|||||++||||+|...|.|++.++.||+.+|+++||+++|+.+++||.+++|++.++..++++.++.++..+|+|.++
T Consensus 2 ~~v~Ivg~~rTpfg~~~~g~l~~~~~~eLa~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl~~~~ 81 (391)
T PRK07661 2 REAVIVAGARTPVGKAKKGSLKTVRPDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGLPYTV 81 (391)
T ss_pred CcEEEEEccCCCcccCCCCccCCCCHHHHHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCCCCCc
Confidence 47999999999999855788999999999999999999999988899999999998876554578889999999997569
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCC-CCCChhhhhhhhhhcccccHHHHHHHHHHHhC
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWE-GSVNPKVKAFEQAQNCLLPMGVTSENVAHRFG 208 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g 208 (462)
|+++|+++|+||++|+..|+++|++|++|++||+|+|+||+.|+... ....+.+.+. .......|++++++|+++||
T Consensus 82 p~~~V~~aCaSG~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~--~~~~~~~m~~~a~~~~~~~g 159 (391)
T PRK07661 82 PAITINRYCSSGLQSIAYGAERIMLGHSEAVIAGGAESMSLVPMMGHVVRPNPRLVEA--APEYYMGMGHTAEQVAVKYG 159 (391)
T ss_pred ceeehhhhhhHHHHHHHHHHHHHHcCCCCEEEEEEEeecccCCccccccCCCcccccc--ccchhhhHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999998764110 0001111110 11112358999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCccccccceeccc----CCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCC
Q 012506 209 VTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIV----DPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDG 284 (462)
Q Consensus 209 isre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~----np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g 284 (462)
+|||+||+|+++||+||.+|+++|+|++||+|++++.+ +++.... .+++++|+++|+++|+|.|.+++|+|+++|
T Consensus 160 ~tre~~a~~av~s~~~a~~n~~ag~~~~ei~pi~~~~~~~~~~~~~~~~-~~~~~~d~~~rp~~~~e~l~~l~p~f~~~g 238 (391)
T PRK07661 160 ISREDQDAFAVRSHQRAAKALAEGKFADEIVPVDVTLRTVGENNKLQEE-TITFSQDEGVRADTTLEILGKLRPAFNVKG 238 (391)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCccceeeeecccccccccCccccc-ceeEecCCCCCCCCCHHHHhcCCCCcCCCC
Confidence 99999999999999999999999999999999987531 1222211 267899999999999999999999998889
Q ss_pred CcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCC
Q 012506 285 TTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAF 364 (462)
Q Consensus 285 ~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eihdaf 364 (462)
++|.+|||+++|||+++||++++.|++++.+|+++|++++..+.+|..++.++..+++++|+++||+++|||++|+||+|
T Consensus 239 ~lt~~~~~~~~DGAaavvl~s~~~A~~~g~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~~ei~d~f 318 (391)
T PRK07661 239 SVTAGNSSQMSDGAAAVLLMDREKAESDGLKPLAKFRSFAVAGVPPEVMGIGPIAAIPKALKLAGLELSDIGLFELNEAF 318 (391)
T ss_pred CEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEecCCCcccchHHHHHHHHHHHHcCCCHHHCCEEEeCCHH
Confidence 99999999999999999999999999999999999999999999998888888999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEe
Q 012506 365 ASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 365 a~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
+++++.++|.||++++|+|++||++++|||+||||+++++|+++||+++++ ++||+++|+|||+|.|+|||+
T Consensus 319 ~~~~l~~~e~lg~~~~~vN~~GG~~a~Ghp~gasG~~~~~el~~qL~~~~~--~~g~~~~c~~gg~g~a~~~e~ 390 (391)
T PRK07661 319 ASQSIQVIRELGLDEEKVNVNGGAIALGHPLGCTGAKLTLSLIHEMKRRNE--QFGIVTMCIGGGMGAAGVFEL 390 (391)
T ss_pred HHHHHHHHHHcCCCCCCCCCCCChHHhCCcHHHHHHHHHHHHHHHHHhcCC--CeEEEEEccccChhhEEEEEe
Confidence 999999999999999999999999999999999999999999999999877 899999999999999999997
|
|
| >TIGR02445 fadA fatty oxidation complex, beta subunit FadA | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-75 Score=600.67 Aligned_cols=379 Identities=44% Similarity=0.648 Sum_probs=339.8
Q ss_pred cEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHH-cCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEK-TNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 51 ~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~-agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
+|+|||++||||+|.+.|.+++.++.||+.++++++|++ +|+++++||.+++|++.+...++.++++.+++..|+|.++
T Consensus 1 ~v~Ivg~~rTpfg~~~~gs~~~~~~~~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~~~~~ 80 (385)
T TIGR02445 1 DVVIVDFGRTPMGRSKGGAFRNTRAEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQIPHTS 80 (385)
T ss_pred CEEEEecccCCcccCCCCCcCCCCHHHHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCCCCCc
Confidence 499999999999986578999999999999999999996 6999999999999999755544567899999999999889
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCC
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGV 209 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gi 209 (462)
|+++||++|+||+.|+..|+++|++|++|++|++|+|+||+.|........+.+.+.. .+....|++++++|+++||+
T Consensus 81 p~~tV~~~CaSG~~Ai~~Aa~~I~sG~~d~vlagG~E~ms~~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~~~ygi 158 (385)
T TIGR02445 81 AAVTVNRLCGSSMQALHDAARAIMTGDADVCLVGGVEHMGHVPMMHGVDFHPGMSLHV--AKAAGMMGLTAEMLGKMHGI 158 (385)
T ss_pred chhhhhhhhHHHHHHHHHHHHHHHCCCCCEEEEeeehhcccCccccCCCcchhHHhhh--ccccchHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999999999999877532222222222211 11124799999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC-CCCccc
Q 012506 210 TRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK-DGTTTA 288 (462)
Q Consensus 210 sre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p-~g~~t~ 288 (462)
|||+||+|+++||+||.+|+++|+|++||+||+++.++ ..++++++|+.+|+++|+|+++++||+|+| +|++|.
T Consensus 159 tre~~d~~A~~sh~~a~~a~~~g~f~nei~pv~~~~~~-----~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~~g~lt~ 233 (385)
T TIGR02445 159 SREQQDAFAARSHARAHAATQEGKFKNEIIPTQGHDAD-----GFLKQFDYDEVIRPETTVESLAALRPAFDPKNGTVTA 233 (385)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCccceeeeeeccCC-----CCceeeCCCCCCCCCCCHHHHhcCCceecCCCCceec
Confidence 99999999999999999999999999999999875321 123568899999999999999999999998 899999
Q ss_pred CCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCCHHHH
Q 012506 289 GNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQF 368 (462)
Q Consensus 289 ~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~ 368 (462)
+|||+++|||+++||++++.|++++.+|+++|++++..+.+|..++.++..+++++|+++||+++|||++|+||+|++++
T Consensus 234 ~~~~~~sDGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~~~~~~~~~~~~a~~~al~~AGi~p~DId~~Ei~daFa~~~ 313 (385)
T TIGR02445 234 GTSSALSDGASAMLVMSEQRANELGLKPRARIRSMAVAGCDPSIMGYGPVPATQKALKRAGLSISDIDVFELNEAFAAQA 313 (385)
T ss_pred ccCCCcCCceEEEEEecHHHHHHCCCCeeEEEEEEEEcCCCCcccchhHHHHHHHHHHHcCCCHHHcCEEEEccccHHHH
Confidence 99999999999999999999999999999999999998888887777888999999999999999999999999999999
Q ss_pred HHHHHHcCCCC---CCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEe
Q 012506 369 VYCRNKLGLDP---EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 369 ~~~~e~LGl~~---~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
++++|+|||++ .|+|++||++++|||+||||++++.+++++|+++++ ++||+++|+|+|+|.|+|||+
T Consensus 314 l~~~e~lg~~~~g~~~vN~~GG~la~GhP~GATG~r~v~~l~~~l~~~~~--~~Gl~~~~~g~g~g~a~~~e~ 384 (385)
T TIGR02445 314 LPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNLMEQKDA--TFGLATMCIGLGQGIATVFER 384 (385)
T ss_pred HHHHHHcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHHHHHHhcCC--CeEEEEEecccChhheEEEEe
Confidence 99999999976 599999999999999999999999999977776655 899999999999999999997
|
This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli. |
| >PRK09050 beta-ketoadipyl CoA thiolase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-75 Score=602.67 Aligned_cols=381 Identities=41% Similarity=0.639 Sum_probs=341.4
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHH-cCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCC
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEK-TNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~-agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~ 128 (462)
++|+|+|++||||+| +.|.+++.++.+|+.++++++|++ +|+++++||.+++|++.+.+.++.++++.+++.+|+|.+
T Consensus 2 ~~V~Ivg~~rTpfgk-~~g~l~~~~~~~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~ 80 (401)
T PRK09050 2 TEAFICDAIRTPIGR-YGGALSSVRADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLPVS 80 (401)
T ss_pred CcEEEEecccCCccc-CCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHHcCCCCC
Confidence 579999999999998 568899999999999999999994 799999999999999986554357899999999999878
Q ss_pred cceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCC---CCC--Chhhhhh--------hh--hhccc
Q 012506 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWE---GSV--NPKVKAF--------EQ--AQNCL 193 (462)
Q Consensus 129 ~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~---~~~--~~~~~~~--------~~--~~~~~ 193 (462)
+|+++|+++|+||+.|+..|+++|++|++|++|++|+|+||+.|+... ..+ ...+.+. +. .....
T Consensus 81 vP~~tV~~aCaSG~~Ai~~A~~~I~sG~~dvvlagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (401)
T PRK09050 81 VPGTTINRLCGSGMDAVGTAARAIKAGEAELMIAGGVESMSRAPFVMGKADSAFSRQAEIFDTTIGWRFVNPLMKAQYGV 160 (401)
T ss_pred CceEEEecccccHHHHHHHHHHHHHCCCCCEEEEecccccccCcccccchhhhcccCcccccccccccccCCcccccccc
Confidence 999999999999999999999999999999999999999998874110 000 0011110 00 11123
Q ss_pred ccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHH
Q 012506 194 LPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSEL 273 (462)
Q Consensus 194 ~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l 273 (462)
.+||+++++|+++||+|||+||+||..||+|+.+|+++|+|++||+||+++.+ + .+.+++++|+.+|+++|+|+|
T Consensus 161 ~~Mg~~ae~~a~~~gisre~~D~~A~~S~k~a~~A~~ng~~~~ei~p~~~~~~--~---~~~~~~~~da~~r~~~t~e~l 235 (401)
T PRK09050 161 DSMPETAENVAEDYNISRADQDAFALRSQQRAAAAQAAGFLAEEIVPVTIPQK--K---GDPVVVDRDEHPRPETTLEAL 235 (401)
T ss_pred ccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeeccC--C---CCceeeCCCCCCCCCCCHHHH
Confidence 57999999999999999999999999999999999999999999999987531 1 223578999999999999999
Q ss_pred hcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCC
Q 012506 274 AKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLD 353 (462)
Q Consensus 274 ~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~ 353 (462)
.+++|+|+|+|++|.+|||+++|||+++||+++++|++++.+|+++|+|++..+.+|..++.++..+++++|+++||+++
T Consensus 236 ~~l~~~~~~~g~lt~~n~s~~~DGAaa~vl~s~~~A~~lg~~p~a~I~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~ 315 (401)
T PRK09050 236 AKLKPVFRPDGTVTAGNASGVNDGAAALLLASEAAAKKHGLTPRARILGMATAGVEPRIMGIGPAPATRKLLARLGLTID 315 (401)
T ss_pred hcCCCcccCCCEEeCCCcCCCcCceEEEEEecHHHHHHCCCCccEEEEEEEEeccCCccccchHHHHHHHHHHHcCCCHH
Confidence 99999999889999999999999999999999999999999999999999998888888888899999999999999999
Q ss_pred CccEEEecCCCHHHHHHHHHHcCCCC--CCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeeccccee
Q 012506 354 DIDLFEINEAFASQFVYCRNKLGLDP--EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMG 431 (462)
Q Consensus 354 DID~~eihdafa~~~~~~~e~LGl~~--~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g 431 (462)
|||++|+||+|+++++.++|.||||+ .|+|++||.+++|||+|+||+++++|+++||+++++ ++||+++|+|||+|
T Consensus 316 DId~~ei~D~f~~~~l~~~e~lg~~~~~~pvN~~GG~la~Ghp~gasG~~~~~e~~~qLr~~~~--~~g~~~~c~~gG~g 393 (401)
T PRK09050 316 QFDVIELNEAFAAQGLAVLRQLGLADDDARVNPNGGAIALGHPLGMSGARLVLTALHQLERTGG--RYALCTMCIGVGQG 393 (401)
T ss_pred HCCccccCcHhHHHHHHHHHHcCCCCCCCCEeCCCchHhcCCchhHHHHHHHHHHHHHHHhcCC--CeEEEEEcccccce
Confidence 99999999999999999999999976 599999999999999999999999999999999987 99999999999999
Q ss_pred EEEEEEe
Q 012506 432 AAAVFER 438 (462)
Q Consensus 432 ~A~v~~~ 438 (462)
.|++||+
T Consensus 394 ~a~~~e~ 400 (401)
T PRK09050 394 IALAIER 400 (401)
T ss_pred eEEEEEe
Confidence 9999997
|
|
| >PRK08235 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-75 Score=602.27 Aligned_cols=380 Identities=39% Similarity=0.615 Sum_probs=339.9
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
++|+|||++||||+| ++|.+++.++.||+.+|++++|+++|+++++||.+++|++.+.+. +.++++.++..+|+|.++
T Consensus 2 ~~v~Ivg~~rTpfg~-~~g~~~~~~~~eLa~~A~~~aL~~agl~~~dID~vi~g~~~~~~~-~~~~~~~~~~~~Gl~~~~ 79 (393)
T PRK08235 2 SKTVIVSAARTPFGK-FGGSLKDVKATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQ-GQIPSRQAARAAGIPWEV 79 (393)
T ss_pred CcEEEEecCcCCccC-CCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCC-CCCHHHHHHHHcCCCCCc
Confidence 579999999999998 678899999999999999999999999999999999999876543 678888899999997679
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCC-----CCC-Chhhhhh--hhh-hc--ccccHHH
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWE-----GSV-NPKVKAF--EQA-QN--CLLPMGV 198 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~-----~~~-~~~~~~~--~~~-~~--~~~~~g~ 198 (462)
|+++|+++|+||++|+..|+++|++|++|++|++|+|+||+.|+... ..+ .+.+.+. .+. .+ ....|+.
T Consensus 80 p~~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLvvG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (393)
T PRK08235 80 QTETVNKVCASGLRAVTLADQIIRAGDASVIVAGGMESMSNAPYILPGARWGYRMGDNEVIDLMVADGLTCAFSGVHMGV 159 (393)
T ss_pred ceeehhhhhhHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCcccccccccccccCCchhhhhhcccccccccCCCCHHH
Confidence 99999999999999999999999999999999999999998774211 011 1111110 010 01 1246999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCC
Q 012506 199 TSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKP 278 (462)
Q Consensus 199 ~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p 278 (462)
++++|+++||+|||++|+|+++||+||.+|+++|+|++||+|+++..+ . ..++++++|+.+|+++|+|++++++|
T Consensus 160 ~A~~~~~~ygitre~~d~~avksh~~a~~a~~~g~~~~ei~pv~~~~~---~--~~~~~~~~da~~r~~~t~e~~~~~~~ 234 (393)
T PRK08235 160 YGGEVAKELGISREAQDEWAYRSHQRAVSAHEEGRFEEEIVPVTIPQR---K--GDPIVVAKDEAPRKDTTIEKLAKLKP 234 (393)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeeEecCC---C--CCceEeCCCCCCCCCCCHHHHhcCCC
Confidence 999999999999999999999999999999999999999999987431 1 12356889999999999999999999
Q ss_pred cccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccEE
Q 012506 279 VFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLF 358 (462)
Q Consensus 279 ~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~ 358 (462)
+|+|+|++|.+|||+++|||+|+||++++.|++++.+|+++|.+++..+.++..+..++..+++++|+++||+++|||++
T Consensus 235 v~~p~g~lt~~~~~~~~DGAaa~vl~s~~~A~~~~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~~ 314 (393)
T PRK08235 235 VFDKTGTITAGNAPGVNDGAAALVLMSEDRAKQEGRKPLATILAHTAIAVEAKDFPRTPGYAINALLEKTGKTVEDIDLF 314 (393)
T ss_pred cccCCCcEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEecccChhhhcchHHHHHHHHHHHhCCCHHHCCee
Confidence 99999999999999999999999999999999999999999999888777777777778899999999999999999999
Q ss_pred EecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEe
Q 012506 359 EINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 359 eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
|+||+|+++++.++|.|||+++|+|++||++++|||+||||+++++++++||+++++ ++||+++|+|||+|.|+|||+
T Consensus 315 e~~d~f~~~~l~~~e~lg~~~~pvN~~GG~la~Ghp~gasG~~~~~~l~~qL~~~~~--~~g~~~~c~~gG~g~a~~~e~ 392 (393)
T PRK08235 315 EINEAFAAVALASTEIAGIDPEKVNVNGGAVALGHPIGASGARIIVTLIHELKRRGG--GIGIAAICSGGGQGDAVLIEV 392 (393)
T ss_pred hhcchhHHHHHHHHHHhCCCcccCCcCCchHHhCCcHHHHHHHHHHHHHHHHHhcCC--CeEEEEEcccccceEEEEEEe
Confidence 999999999999999999999999999999999999999999999999999999988 899999999999999999997
|
|
| >PRK06205 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-75 Score=602.29 Aligned_cols=381 Identities=40% Similarity=0.622 Sum_probs=340.5
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
++|+|||++||||+| +.|.|++.++.||+.+|+++||++++|++++||.+++|++.+... +++.++.++..+|++.++
T Consensus 2 ~~v~Ivg~~rTpfgk-~~g~~~~~~~~eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~-~~~~a~~va~~~Gl~~~~ 79 (404)
T PRK06205 2 RDAVICEPVRTPVGR-FGGAFKDVPAEELAATVIRALVERTGIDPARIDDVIFGQGYPNGE-APAIGRVAALDAGLPVTV 79 (404)
T ss_pred CceEEEEeecCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCC-CChHHHHHHHHcCCCCCC
Confidence 579999999999998 678999999999999999999999999999999999999987765 677889999999997678
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCC-----CCCC-Ch-hhhh---h--h---hhhcccc
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAW-----EGSV-NP-KVKA---F--E---QAQNCLL 194 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~-----~~~~-~~-~~~~---~--~---~~~~~~~ 194 (462)
|+++|+++|+||++++..|+++|++|.+|++||+|+|+||+.++.. .... .+ .+.. . . .......
T Consensus 80 p~~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (404)
T PRK06205 80 PGMQLDRRCGSGLQAVITAAMQVQTGAADVVIAGGAESMSNVEFYTTDMRWGVRGGGVQLHDRLARGRETAGGRRFPVPG 159 (404)
T ss_pred ceeehhhhhhHHHHHHHHHHHHHHcCCCCEEEEeeehhhccCcccccccccccccCcchhhhhhccCcccccccccCCCC
Confidence 9999999999999999999999999999999999999999766311 1111 00 1111 0 0 0111234
Q ss_pred cHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHh
Q 012506 195 PMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELA 274 (462)
Q Consensus 195 ~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~ 274 (462)
.|+.++++|+++||+|||+||+|+++||+||.+|++.|+|++||+||.+..+ .++++++++|+.+|+++|+|+++
T Consensus 160 ~m~~~a~~~~~~~gitre~~~~~Av~sh~~A~~a~~~g~~~~ei~pv~~~~~-----~~~~~~~~~da~~r~~~t~e~~~ 234 (404)
T PRK06205 160 GMIETAENLRREYGISREEQDALAVRSHQRAVAAQEAGRFDDEIVPVTVPQR-----KGDPTVVDRDEHPRADTTLESLA 234 (404)
T ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeEecCC-----CCCceEeccCCCCCCCCCHHHHh
Confidence 6788899999999999999999999999999999999999999999987431 12235688999999999999999
Q ss_pred cCCCcc---cCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCC
Q 012506 275 KLKPVF---KKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQ 351 (462)
Q Consensus 275 ~~~p~f---~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~ 351 (462)
++||+| +|+|++|.+|||+++|||+|+||++++.|++++.+|+++|.|++..+.+|..++.++..|++++|+++||+
T Consensus 235 ~~~~v~~~~~p~g~lt~~~~~~~~DGAaa~vl~se~~A~~~~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~ 314 (404)
T PRK06205 235 KLRPIMGKQDPEATVTAGNASGQNDAAAACLVTTEDKAEELGLRPLARLVSWAVAGVEPSRMGIGPVPATEKALARAGLT 314 (404)
T ss_pred cCCCcCccCCCCCceeCcccCCCCCceeEEEEecHHHHHHCCCCceEEEEEEEEeccCCccccccHHHHHHHHHHHcCCC
Confidence 999999 58899999999999999999999999999999999999999999998888888889999999999999999
Q ss_pred CCCccEEEecCCCHHHHHHHHHHcCCCC---CCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeeccc
Q 012506 352 LDDIDLFEINEAFASQFVYCRNKLGLDP---EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGT 428 (462)
Q Consensus 352 ~~DID~~eihdafa~~~~~~~e~LGl~~---~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~ 428 (462)
++|||++|+||+|+++++.++|.||||+ +|+|++||++++|||+|+||+++++|+++||+++++ ++||+++|+||
T Consensus 315 ~~Did~~ei~d~f~~~~l~~~e~lg~~~~~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~~~--~~gl~~~c~~g 392 (404)
T PRK06205 315 LDDIDLIELNEAFAAQVLAVLKEWGFGADDEERLNVNGSGISLGHPVGATGGRILATLLRELQRRQA--RYGLETMCIGG 392 (404)
T ss_pred HHHCCEeeeccHHHHHHHHHHHHhCcCcccCCCcCCCCCHHhhCCChhhhHHHHHHHHHHHHHhcCC--CeEEEEEeccC
Confidence 9999999999999999999999999997 589999999999999999999999999999999877 99999999999
Q ss_pred ceeEEEEEEec
Q 012506 429 GMGAAAVFERG 439 (462)
Q Consensus 429 G~g~A~v~~~~ 439 (462)
|+|.|+|||+-
T Consensus 393 g~g~a~~~e~~ 403 (404)
T PRK06205 393 GQGLAAVFERV 403 (404)
T ss_pred ChhhEEEEEec
Confidence 99999999974
|
|
| >KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-77 Score=566.55 Aligned_cols=380 Identities=39% Similarity=0.638 Sum_probs=352.9
Q ss_pred CCCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCC
Q 012506 48 YGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE 127 (462)
Q Consensus 48 ~~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~ 127 (462)
.+++|+||++.|||++. ++|+|...+..+|..-|++.+|+++.+++++++.+++|++++.+. |++++|++++.+|||.
T Consensus 4 ~~k~V~IVsaARTPIGs-F~gslssl~A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~Anl-GQapaRQaalgAGlp~ 81 (396)
T KOG1390|consen 4 SSKDVFIVSAARTPIGS-FRGSLSSLTATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANL-GQAPARQAALGAGLPY 81 (396)
T ss_pred CCCceEEEeeccccccc-cccccccCchhhHHHHHHHHHHHhcCCCHHHhhhhhhcccccccc-CcchHHHHHhhcCCCc
Confidence 34789999999999995 899999999999999999999999999999999999999999887 9999999999999999
Q ss_pred CcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCC----CCCh------hh-hhhhhhhcccccH
Q 012506 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEG----SVNP------KV-KAFEQAQNCLLPM 196 (462)
Q Consensus 128 ~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~----~~~~------~~-~~~~~~~~~~~~~ 196 (462)
++++++||..|+||+.|+.++++.|+.|..|+++++|.|+||..|+.+.. .+.. -+ +..++.++ ..+|
T Consensus 82 sv~~tTvNkvCaSgmKAv~laaQsI~~G~~divVaGGmEsMS~vP~~~~~R~g~~~G~~~l~Dgi~~DGL~D~y~-~~~M 160 (396)
T KOG1390|consen 82 SVPATTVNKVCASGMKAVILAAQSIQTGHADIVVAGGMESMSNVPYLYVARGGVKYGGVQLVDGIVKDGLTDAYD-KCHM 160 (396)
T ss_pred ceeeEeehhhhhhhHHHHHHHHHHHhcCCccEEEecccchhccCcchhhhccCcCcCCeeeeechhhcchHHHhc-cCCc
Confidence 99999999999999999999999999999999999999999999953321 1111 11 11344443 3689
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcC
Q 012506 197 GVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKL 276 (462)
Q Consensus 197 g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~ 276 (462)
|..+|+.+++|+|+||+||.||+.|++++..||++|+|.+||+||+++.+ +..++|++||.+++....+.+.++
T Consensus 161 G~~aE~~a~~~~ItRe~QD~yAI~Sy~r~~~Aq~~g~f~~EIVPV~V~~~------rg~~~v~~DEe~~k~~~~~~~~~l 234 (396)
T KOG1390|consen 161 GICAENTAKKYQITREEQDAYAIESYKRSENAQKAGKFDKEIVPVEVKTK------RGETVVKKDEEPKKGSNIEKLSKL 234 (396)
T ss_pred chhHhhhHHHhCCcHhhhhhHHHHhHHHHHHHHhcCCCCCceeeEEEecC------CCcEEeccchhhhcccchhhhccc
Confidence 99999999999999999999999999999999999999999999998753 235689999999999999999999
Q ss_pred CCcccC-CCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCc
Q 012506 277 KPVFKK-DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDI 355 (462)
Q Consensus 277 ~p~f~p-~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DI 355 (462)
+|+|.. +|++|..|+|.+.|||+|+||++.+.+.++|++|+++|++|+.++.+|..+.++|..|++++|+++||+.+||
T Consensus 235 ~~vF~~~ggTVTaaNAS~lnDGAAAvvL~s~e~~~~~glkPLArIv~~~dAa~~P~df~iaP~laipk~lk~aG~~~sdV 314 (396)
T KOG1390|consen 235 RPVFKEDGGTVTAANASTLNDGAAAVVLMSGEAAKELGLKPLARIVAWGDAATEPIDFTIAPALAIPKALKKAGLEQSDV 314 (396)
T ss_pred cceeecCCCeeccccccccCccceeeEEechhhHhHcCCchHHHHhhhhhhccChhhcccchHHHHHHHHHHcCcchhhh
Confidence 999965 5779999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEE
Q 012506 356 DLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAV 435 (462)
Q Consensus 356 D~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v 435 (462)
|+||+||+|+...+..+++||++|++||++||+.++|||+|+||+|.++++++-|+.+++ ++|+.++|+|||++.+++
T Consensus 315 d~~EiNEAFs~v~lA~iK~LgldP~kVNv~GGAValGHPlG~SGaRi~~tL~~~L~~~~g--~~GvAaiCnGGGgasa~v 392 (396)
T KOG1390|consen 315 DYWEINEAFSVVVLANIKKLGLDPSKVNVHGGAVALGHPLGMSGARILVTLLHTLEQKGG--KIGVAAICNGGGGASAMV 392 (396)
T ss_pred hHHhhhhhhhHHHHHHHHHhCCCHhhccCCCceeecCCCcCCcchhHHHHHHHHHHhhCC--ceeEEEEecCCCceeeEE
Confidence 999999999999999999999999999999999999999999999999999999999988 999999999999999999
Q ss_pred EEe
Q 012506 436 FER 438 (462)
Q Consensus 436 ~~~ 438 (462)
+++
T Consensus 393 iek 395 (396)
T KOG1390|consen 393 IEK 395 (396)
T ss_pred Eec
Confidence 986
|
|
| >PRK06633 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-75 Score=599.37 Aligned_cols=379 Identities=37% Similarity=0.637 Sum_probs=342.0
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
+|||||++.||||+| ++|.|++.++.+|+.++++++|+++|+++++||.+++|++.+.+. +++.+|.+++.+|+|.++
T Consensus 3 ~~~~iv~~~Rtp~~~-~~g~l~~~~~~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~-g~~~~r~~~~~~Gl~~~~ 80 (392)
T PRK06633 3 KPVYITHAKRTAFGS-FMGSLSTTPAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGS-GQNPARQTLIHAGIPKEV 80 (392)
T ss_pred CCEEEEeeccCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCcccc-ccHHHHHHHHHCCCCCCc
Confidence 579999999999998 679999999999999999999999999999999999999987764 788999999999998779
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCC-C-CC--CCC-hhhhh--hhhhh-cc--cccHHHH
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMA-W-EG--SVN-PKVKA--FEQAQ-NC--LLPMGVT 199 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~-~-~~--~~~-~~~~~--~~~~~-~~--~~~~g~~ 199 (462)
|+++|+++|+||+.|+..|+++|++|++|++|++|+|+||..|.. + .. .+. ....+ ..+.. ++ ...|+++
T Consensus 81 p~~~V~~~CaSG~~Ai~~A~~~I~sG~~dvvla~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 160 (392)
T PRK06633 81 PGYTINKVCGSGLKSVALAANSIMTGDNEIVIAGGQENMSLGMHGSYIRAGAKFGDIKMVDLMQYDGLTDVFSGVFMGIT 160 (392)
T ss_pred cchhhcchhHHHHHHHHHHHHHHHcCCCCEEEEcccccCCCCCcchhcccccccCcchhhhhhcccccccccCcchHHHH
Confidence 999999999999999999999999999999999999999976531 1 10 111 00111 00111 11 1369999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCc
Q 012506 200 SENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPV 279 (462)
Q Consensus 200 a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~ 279 (462)
+++|+++||+|||+||+|+++||+||.+|+++++|++||+|++++.++ ...+++.|+.+|+.+++|.|.+++|+
T Consensus 161 a~~~~~~~gitre~~d~~Avksh~~a~~np~A~~~~~ei~p~~v~~~~------~~~~~~~d~~~rp~~~~e~l~~l~p~ 234 (392)
T PRK06633 161 AENISKQFNISRQEQDEFALSSHKKAAKAQLAGIFKDEILPIEVTIKK------TTSLFDHDETVRPDTSLEILSKLRPA 234 (392)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCCcCceeeEEeccCC------CceeeccCCCCCCCCCHHHHccCCCc
Confidence 999999999999999999999999999999999999999999875311 11468999999999999999999999
Q ss_pred ccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccEEE
Q 012506 280 FKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFE 359 (462)
Q Consensus 280 f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~e 359 (462)
|+|.|++|.+|||+++|||+++||+++++|++++.+|+++|+|++..+.+|..++.++..+++++|+++||+++|||++|
T Consensus 235 ~~~~g~lt~~n~s~~sDGAaalvl~see~A~~~g~~p~a~I~g~~~~~~~~~~~~~~~~~a~~~Al~~AGl~p~DID~~e 314 (392)
T PRK06633 235 FDKNGVVTAGNASSINDGAACLMVVSEEALKKHNLTPLARIVSYASAGVDPSIMGTAPVPASQKALSKAGWSVNDLEVIE 314 (392)
T ss_pred cCCCCCEechhcCCccCceEEEEEecHHHHHHCCCCeeEEEEEEEEecCCcchhchHHHHHHHHHHHHcCCCHHHcCeee
Confidence 99999999999999999999999999999999999999999999999888888888888999999999999999999999
Q ss_pred ecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEe
Q 012506 360 INEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 360 ihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
+||+|+++++++.|.||++..|||++||++++|||+||||+++++++++||+++++ ++||+++|+|||+|.|++||+
T Consensus 315 i~dafa~~~l~~~~~l~~~~~~vN~sGg~~a~GHplgAtG~~~~~~~~~qL~~~~~--~~g~~~~c~~gG~g~a~~~e~ 391 (392)
T PRK06633 315 VNEAFAAQSIYVNREMKWDMEKVNINGGAIAIGHPIGASGGRVLITLIHGLRRAKA--KKGLVTLCIGGGMGMAMCVEA 391 (392)
T ss_pred hhhHHHHHHHHHHhhhCCCccccCCCCchHhhCCcHHHHHHHHHHHHHHHHHhcCC--CeEEEEEecccChhheEEEEe
Confidence 99999999999999999998999999999999999999999999999999999877 999999999999999999997
|
|
| >TIGR02430 pcaF beta-ketoadipyl CoA thiolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-75 Score=598.68 Aligned_cols=380 Identities=41% Similarity=0.637 Sum_probs=338.6
Q ss_pred cEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHH-cCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEK-TNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 51 ~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~-agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
+|+|||++||||+| +.|.+++.++.+|+.++++++|++ ++|++++||.+++|++++.+.++.++++.+++.+|+|.++
T Consensus 2 ~v~Ivg~~rTpfgk-~~g~~~~~~~~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~~ 80 (400)
T TIGR02430 2 EAYICDAIRTPIGR-YGGSLSSVRADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGLPVSV 80 (400)
T ss_pred cEEEEecccCCccc-CCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCC
Confidence 59999999999998 568899999999999999999994 7999999999999999865543578999999999998779
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCC--C-CC---Chhhhh-------hhhhhc--ccc
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWE--G-SV---NPKVKA-------FEQAQN--CLL 194 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~--~-~~---~~~~~~-------~~~~~~--~~~ 194 (462)
|+++|+++|+||++|+..|+++|++|++|++|++|+|+||+.|+.+. . .+ ...+.. .+...+ ...
T Consensus 81 p~~~V~~~CaSG~~Ai~~a~~~I~sG~~d~~la~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (400)
T TIGR02430 81 PGTTVNRLCGSGLDAIGMAARAIKAGEADLLIAGGVESMSRAPFVMGKADSAFSRSAKIEDTTIGWRFINPLMKALYGVD 160 (400)
T ss_pred ceEEeechhhhHHHHHHHHHHHHHCCCCCEEEEeccccccCCcccccccccccccccccccccccccccCcccccccccC
Confidence 99999999999999999999999999999999999999998774111 0 00 000110 000011 135
Q ss_pred cHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHh
Q 012506 195 PMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELA 274 (462)
Q Consensus 195 ~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~ 274 (462)
.||.++++|+++||+|||+||+||+.||++|..|+++|+|++||+||.+|.+ .+ +..++++|+.+|+++|+|++.
T Consensus 161 ~M~~~ae~~a~~ygisre~~d~~A~~Sh~~a~~a~~~g~~~~ei~pv~vk~~---~~--~~~~~n~da~~r~~~t~e~l~ 235 (400)
T TIGR02430 161 SMPETAENVAEEFGISREDQDAFALRSQQRTAAAQASGFFAEEIVPVVIPQK---KG--EPTVVDQDEHPRPETTLEGLA 235 (400)
T ss_pred cHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEEeccC---CC--CceeeCCCCccCCCCCHHHHh
Confidence 7999999999999999999999999999999999999999999999987621 11 113578899999999999999
Q ss_pred cCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCC
Q 012506 275 KLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDD 354 (462)
Q Consensus 275 ~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~D 354 (462)
+++|+|+|+|++|.+|||+++|||+++||+++++|++++.+|+++|+|++..+.+|..++.++..+++++|+++||+++|
T Consensus 236 ~~~~v~~p~g~lt~~~~s~~~DGAaa~vl~s~e~A~~~g~~~~~~I~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~D 315 (400)
T TIGR02430 236 KLKPVVRPDGTVTAGNASGVNDGAAALLLASEEAVQRHGLTPRARILAAATAGVEPRIMGIGPVPATQKLLARAGLSIDQ 315 (400)
T ss_pred cCCCcccCCCCEeccccCCcCCceEEEEEecHHHHHHCCCCccEEEEEEEEecCCCccccchHHHHHHHHHHHhCCCHHH
Confidence 99999999899999999999999999999999999999999999999999888888878888899999999999999999
Q ss_pred ccEEEecCCCHHHHHHHHHHcCCCC--CCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeE
Q 012506 355 IDLFEINEAFASQFVYCRNKLGLDP--EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGA 432 (462)
Q Consensus 355 ID~~eihdafa~~~~~~~e~LGl~~--~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~ 432 (462)
||++|+||+|+++++.++|.||+|+ .|||++||++++|||+|+||+++++|+++||+++++ ++||+++|+|||+|.
T Consensus 316 ID~~ei~D~f~~~~l~~~e~lG~~~~~~pvN~~GG~la~GHp~gasG~~~~~e~~~qLr~~~~--~~g~~~~c~~gG~g~ 393 (400)
T TIGR02430 316 FDVIELNEAFAAQALAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVLTALRQLERSGG--RYALCTMCIGVGQGI 393 (400)
T ss_pred CCCcccCcHHHHHHHHHHHHcCCCCCCCeECCCCchHhccChHHHHHHHHHHHHHHHHHhcCC--CEEEEEEccccChhh
Confidence 9999999999999999999999976 599999999999999999999999999999999887 999999999999999
Q ss_pred EEEEEe
Q 012506 433 AAVFER 438 (462)
Q Consensus 433 A~v~~~ 438 (462)
|+|||+
T Consensus 394 a~~~e~ 399 (400)
T TIGR02430 394 ALAIER 399 (400)
T ss_pred EEEEEe
Confidence 999997
|
Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid. |
| >PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-74 Score=595.19 Aligned_cols=380 Identities=44% Similarity=0.669 Sum_probs=341.2
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHH-cCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCC
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEK-TNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~-agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~ 128 (462)
++|+|||++||||+|...|.+++.++.+|..++++++|++ +|+++++||.+++|++.+...++.+.++.++..+|+|.+
T Consensus 2 ~~v~Ivg~~rTpfg~~~~g~~~~~~~~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl~~~ 81 (387)
T PRK08947 2 EDVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGIPHS 81 (387)
T ss_pred CcEEEEEccCCCcccCCCCCcCCCCHHHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCCCCC
Confidence 5799999999999985579999999999999999999996 799999999999999875544357789999999999877
Q ss_pred cceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhC
Q 012506 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFG 208 (462)
Q Consensus 129 ~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g 208 (462)
+|+++|+++|+||+.|+..|+++|++|++|++|++|+|+||..|......+.+.+.+.. .+....|++++++|+++||
T Consensus 82 ~p~~~V~~~caSG~~Ai~~A~~~I~sG~~d~vlv~G~E~ms~~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~~~yg 159 (387)
T PRK08947 82 VPAVTVNRLCGSSMQALHDAARAIMTGDGDVFLIGGVEHMGHVPMNHGVDFHPGLSKNV--AKAAGMMGLTAEMLGKMHG 159 (387)
T ss_pred CcceeeechhHHHHHHHHHHHHHHHCCCCCEEEEccccccccCccccccCcchhhhhhc--cccchHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999876432222222222211 1112479999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC-CCCcc
Q 012506 209 VTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK-DGTTT 287 (462)
Q Consensus 209 isre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p-~g~~t 287 (462)
++||+||+|+++||+||.+|+++|+|++||+||.++.+ . ..++++++|+.+|+++|+|+|++++|+|+| +|++|
T Consensus 160 isre~~~~~avksh~~a~~a~~~g~f~~ei~pv~~~~~---~--~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~~g~lt 234 (387)
T PRK08947 160 ISREQQDAFAARSHQRAWAATQEGRFKNEIIPTEGHDA---D--GVLKLFDYDEVIRPETTVEALAALRPAFDPVNGTVT 234 (387)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCcceEeeeeecCC---C--CCceeecCCCCCcCCCCHHHHhcCCceeeCCCCcEE
Confidence 99999999999999999999999999999999987532 1 123568899999999999999999999998 88999
Q ss_pred cCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCCHHH
Q 012506 288 AGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ 367 (462)
Q Consensus 288 ~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~ 367 (462)
.+|||+++|||+|+||++++.|++++.+|+++|.+++..+.+|..++.++..+++++|+++||+++|||++|+||+|+++
T Consensus 235 ~~~~~~~sDGAaAvvl~s~~~A~~~g~~p~~~I~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~DId~~El~d~F~~~ 314 (387)
T PRK08947 235 AGTSSALSDGASAMLVMSESRAKELGLKPRARIRSMAVAGCDPSIMGYGPVPATQKALKRAGLSISDIDVFELNEAFAAQ 314 (387)
T ss_pred ccccCCcCCceEEEEEccHHHHHHCCCCccEEEEEEEEcCcCcccccccHHHHHHHHHHHcCCCHHHCCEEEecccchHH
Confidence 99999999999999999999999999999999999999888888787788899999999999999999999999999999
Q ss_pred HHHHHHHcCCCC---CCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEe
Q 012506 368 FVYCRNKLGLDP---EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 368 ~~~~~e~LGl~~---~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
++.++|.|||++ +|+|++||++++|||+||||+++++++++||++++. ++||+++|+|+|+|.++||++
T Consensus 315 ~l~~~e~lg~~~~~~~~vN~~GG~la~GhP~GAtG~~~v~~l~~~L~~~~~--~~gl~~~~~g~G~g~a~~~e~ 386 (387)
T PRK08947 315 SLPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNLMERKDA--QFGLATMCIGLGQGIATVFER 386 (387)
T ss_pred HHHHHHHcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHHHHHHhcCC--CEEEEEEeecccceeEEEEEe
Confidence 999999999986 599999999999999999999999999999998765 999999999999999999987
|
|
| >PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-74 Score=601.75 Aligned_cols=378 Identities=36% Similarity=0.575 Sum_probs=336.8
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
++|+|||++||||+| ++|.+++.++.||+.++++++|+++||++++||.+++|++.+... +.+++|.+++.+|+|.++
T Consensus 5 ~~v~Ivg~~rTpfgk-~~g~l~~~~~~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~-~~~~ar~~a~~aGl~~~~ 82 (428)
T PRK08963 5 DRIAIVSGLRTPFAK-QATAFHGIPAVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPE-APNIAREIVLGTGMNVHT 82 (428)
T ss_pred CeEEEEecccCCccC-CCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCC-ccHHHHHHHHHCCCCCCC
Confidence 579999999999998 568899999999999999999999999999999999999876554 678899999999998679
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCC-------------CChh--------hhh-hh
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGS-------------VNPK--------VKA-FE 187 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~-------------~~~~--------~~~-~~ 187 (462)
|+++|+++|+||++|+..|+++|++|++|++||+|+|+||+.|+.+... .... +.. .+
T Consensus 83 P~~tV~~aCaSG~~Ai~~Aa~~I~sG~~dvvLvgG~Esms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (428)
T PRK08963 83 DAYSVSRACATSFQAVANVAESIMAGTIDIGIAGGADSSSVLPIGVSKKLARALVDLNKARTLGQRLKLFSRLRLRDLLP 162 (428)
T ss_pred cceeehhhhHHHHHHHHHHHHHHHCCCCCEEEEecccccCCCccccccccccchhccccccccCcccccccccchhhccc
Confidence 9999999999999999999999999999999999999999877421110 0000 000 00
Q ss_pred --h---hhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccC
Q 012506 188 --Q---AQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDD 262 (462)
Q Consensus 188 --~---~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~ 262 (462)
. ...+...|++++++|+++||+|||+||+|+++||+||.+|+++|+|++||+||++ +|++. +++.||
T Consensus 163 ~~~~~~~~~~~~~m~~~A~~~~~~ygisre~~~~~avksh~~a~~~~~~g~~~~ei~p~~~---~p~a~-----~~~~D~ 234 (428)
T PRK08963 163 VPPAVAEYSTGLRMGDTAEQMAKTYGISREEQDALAHRSHQLAAQAWAEGKLDDEVMTAHV---PPYKQ-----PLEEDN 234 (428)
T ss_pred cCcccccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeEEe---cCCce-----eeCCCC
Confidence 0 0111246999999999999999999999999999999999999999999999987 56651 588999
Q ss_pred CCCCCCCHHHHhcCCCcccC-CCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCC-CCCccHHHH
Q 012506 263 GIRPNTSVSELAKLKPVFKK-DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPA-IMGVGPAVA 340 (462)
Q Consensus 263 ~~r~~~t~e~l~~~~p~f~p-~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~-~~~~~~~~A 340 (462)
.+|+++|+|++.+++|+|+| +|++|.+|||+++|||+|+||++++.|++++.+|+++|.+++..+.+|. .+..++..+
T Consensus 235 ~~r~~~t~e~~~~~~~v~~p~~g~lt~~~~~~~~DGAaA~vl~see~A~~l~~~p~~~i~g~~~~~~~~~~~~~~~~~~a 314 (428)
T PRK08963 235 NIRGDSTLEDYAKLRPAFDRKHGTVTAANSTPLTDGAAAVLLMSESRAKALGLTPLGYLRSYAFAAIDVWQDMLLGPAYA 314 (428)
T ss_pred CCCCCCCHHHHhcCCccccCCCCceehhhcCCCCCceEEEEEecHHHHHHcCCCccEEEEEEecccCCchhhhhhHHHHH
Confidence 99999999999999999985 6899999999999999999999999999999999999999998876663 355677889
Q ss_pred HHHHHHHcCCCCCCccEEEecCCCHHHHHHHHHHcC-----------------CCCCCCCCCCCccccCCccchHHHHHH
Q 012506 341 IPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLG-----------------LDPEKINVNGGALAIGHPLGTTGARCV 403 (462)
Q Consensus 341 i~~aL~~AGl~~~DID~~eihdafa~~~~~~~e~LG-----------------l~~~~vn~~GG~~a~Ghp~gatG~~~~ 403 (462)
++++|+++||+++|||++|+||+|++++++++|.|| ++.+|||++||++++|||+|+||++++
T Consensus 315 ~~~al~~AGl~~~DiD~~Ei~d~Fa~~~l~~~e~l~~~~~~~~~~g~~~~~G~~~~~pvN~~GG~la~GhP~gasG~~~~ 394 (428)
T PRK08963 315 TPLALERAGLTLADLTLIDMHEAFAAQTLANLQMFASERFAREKLGRSQAIGEVDMSKFNVLGGSIAYGHPFAATGARMI 394 (428)
T ss_pred HHHHHHHcCCCHHHCCEEEEccccHHHHHHHHHHhcCchhhhhcccccccCCCCCCCccCCCCCHHhcCCCccccHHHHH
Confidence 999999999999999999999999999999999994 666799999999999999999999999
Q ss_pred HHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEec
Q 012506 404 ATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFERG 439 (462)
Q Consensus 404 ~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~~ 439 (462)
+|+++||+++++ ++||+++|+|||+|.|+|||+|
T Consensus 395 ~e~~~qLrg~~g--~~gl~~~c~ggG~g~a~~ie~~ 428 (428)
T PRK08963 395 TQTLHELRRRGG--GLGLTTACAAGGLGAAMVLEVE 428 (428)
T ss_pred HHHHHHHhhcCC--CEEEEEEccccChhhEEEEEeC
Confidence 999999999988 8999999999999999999986
|
|
| >PRK05656 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-74 Score=592.43 Aligned_cols=380 Identities=43% Similarity=0.704 Sum_probs=341.7
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
++|||||++||||+| ++|.+++.++.+|+.+|+++||+++|+++++||.+++|++.+... ++++++.++..+|+|.++
T Consensus 2 ~~v~Ivg~~rTpfgk-~~g~~~~~~~~~La~~A~~~AL~~agl~~~dID~vi~g~~~~~~~-~~~~a~~va~~lGl~~~~ 79 (393)
T PRK05656 2 QDVVIVAATRTAIGS-FQGSLANIPAVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGA-GQNPARQAAIKAGLPHSV 79 (393)
T ss_pred CcEEEEEcccCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCCC-CCcHHHHHHHHcCCCCCc
Confidence 579999999999998 578899999999999999999999999999999999999876544 677889999999997558
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCC-----CC-Chh-hh----h-hhhhhcccccHH
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEG-----SV-NPK-VK----A-FEQAQNCLLPMG 197 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~-----~~-~~~-~~----~-~~~~~~~~~~~g 197 (462)
|+++|+++|+||++++..|+++|++|++|++|++|+|+||..|+.... .+ ... +. + .++.. ....|+
T Consensus 80 p~~~V~~~Casg~~ai~~A~~~I~sG~~d~vLv~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a 158 (393)
T PRK05656 80 PAMTLNKVCGSGLKALHLAAQAIRCGDAEVIIAGGQENMSLAPYVLPGARTGLRMGHAQLVDSMITDGLWDAF-NDYHMG 158 (393)
T ss_pred ceEEecccchhHHHHHHHHHHHHHcCCCCEEEEEEEhhhccCccccccccccccccchhhhhhhccccccccc-cCCCHH
Confidence 999999999999999999999999999999999999999987752110 00 000 11 0 11111 124699
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCC
Q 012506 198 VTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLK 277 (462)
Q Consensus 198 ~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~ 277 (462)
+++++|+++||+|||+||+|+++||+||.+|+..|+|++||+|+++..+ ...+++++.||++|+++|+|.|.+++
T Consensus 159 ~~a~~~~~~~gitre~~d~~Av~sh~~a~~a~~~a~~~~ei~pv~~~~~-----~~~~~~~~~D~~~r~~~~~e~l~~l~ 233 (393)
T PRK05656 159 ITAENLVEKYGISREAQDAFAAASQQKAVAAIEAGRFDDEITPILIPQR-----KGEPLAFATDEQPRAGTTAESLAKLK 233 (393)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeEEeccC-----CCCceEeccCCCCCCCCCHHHHhcCC
Confidence 9999999999999999999999999999999999999999999977421 12335688999999999999999999
Q ss_pred CcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccE
Q 012506 278 PVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDL 357 (462)
Q Consensus 278 p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~ 357 (462)
|+|.|+|.+|.+|||+++|||+++||+++++|++++.+|+++|+|++..+.+|..++.++..+++++|+++||+++|||+
T Consensus 234 p~~~~~g~lt~~~~s~~~DGAaa~vl~s~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~ 313 (393)
T PRK05656 234 PAFKKDGSVTAGNASSLNDGAAAVLLMSAAKAKALGLPVLAKIAAYANAGVDPAIMGIGPVSATRRCLDKAGWSLAELDL 313 (393)
T ss_pred CCcCCCCCEEccccCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEecCCCcccchhHHHHHHHHHHHcCCCHHHCCE
Confidence 99999999999999999999999999999999999999999999999999999888889999999999999999999999
Q ss_pred EEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEE
Q 012506 358 FEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 437 (462)
Q Consensus 358 ~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~ 437 (462)
+|+||+|+.+++.+.|.||++++|+|++||++++|||+||||+++++++++||+.+++ +|||+++|+|||+|.|+|||
T Consensus 314 ~e~~d~f~~~~~~~~e~lg~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~l~~~l~~~~~--~~gl~~~c~~gG~g~a~~~e 391 (393)
T PRK05656 314 IEANEAFAAQSLAVGKELGWDAAKVNVNGGAIALGHPIGASGCRVLVTLLHEMIRRDA--KKGLATLCIGGGQGVALAIE 391 (393)
T ss_pred EEecCccHHHHHHHHHHhCCCCccCCcCCCHHHhCccHHHHHHHHHHHHHHHHHHcCC--CEEEEEEcccCcceEEEEEe
Confidence 9999999999999999999999999999999999999999999999999999999876 99999999999999999999
Q ss_pred ec
Q 012506 438 RG 439 (462)
Q Consensus 438 ~~ 439 (462)
+.
T Consensus 392 ~~ 393 (393)
T PRK05656 392 RD 393 (393)
T ss_pred cC
Confidence 74
|
|
| >PRK08131 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-74 Score=591.78 Aligned_cols=382 Identities=40% Similarity=0.643 Sum_probs=339.4
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
.+|||||+.||||+| +.|.+++.++.||+.++++++|+++|+++++||.+++|++.+...++.++++.++..+|+|.++
T Consensus 2 ~~v~Iv~~~rTpfgk-~~g~l~~~~~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Glp~~~ 80 (401)
T PRK08131 2 LDAYIYDGLRSPFGR-HAGALASVRPDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTV 80 (401)
T ss_pred CcEEEEecccCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCCCCCC
Confidence 579999999999998 5788999999999999999999999999999999999999876654578899999999998789
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCC---CCC--C-hhhhhh-------hhhh--cccc
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWE---GSV--N-PKVKAF-------EQAQ--NCLL 194 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~---~~~--~-~~~~~~-------~~~~--~~~~ 194 (462)
|+++|+++|+||+.|+..|+++|++|++|++||+|+|+||+.|..+. ... . ..+... +... ....
T Consensus 81 p~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvlagG~Esms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 160 (401)
T PRK08131 81 PGQTVNRLCASGLAAVIDAARAITCGEGDLYLAGGVESMSRAPFVMGKAESAFSRDAKVFDTTIGARFPNPKIVAQYGND 160 (401)
T ss_pred ceeeeechhhhHHHHHHHHHHHHHCCCCCEEEEEEecCCCCCcccccccccccccCcchhhhhhcccccCcccccccccC
Confidence 99999999999999999999999999999999999999998774211 000 1 111111 0001 1235
Q ss_pred cHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHh
Q 012506 195 PMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELA 274 (462)
Q Consensus 195 ~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~ 274 (462)
.||+++++|+++||+|||+||+|+++||+++..+++.++|++||+|+++... .+ ...+.|+.||++|+.+|+|.|.
T Consensus 161 ~mg~~ae~~~~~ygitre~~d~vA~~S~~~~~~a~~~~~~~~~i~pi~v~~~-~~---~~~~~v~~De~~r~~~~~e~L~ 236 (401)
T PRK08131 161 SMPETGDNVAAEFGISREDADRFAAQSQAKYQAAKEEGFFADEITPIEVPQG-RK---LPPKLVAEDEHPRPSSTVEALT 236 (401)
T ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCceeeEEeccc-cC---CCceEEecCCCCCCCCCHHHHh
Confidence 6999999999999999999999999999999999999999999999976310 11 1113588999999999999999
Q ss_pred cCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCC
Q 012506 275 KLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDD 354 (462)
Q Consensus 275 ~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~D 354 (462)
++||+| ++|++|.+|||+++|||+|+||+++++|++++.+|+++|++++..+.+|..++.++..+++++|+++||+++|
T Consensus 237 ~l~p~f-~~g~lt~~~~s~~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~a~~~agl~~~d 315 (401)
T PRK08131 237 KLKPLF-EGGVVTAGNASGINDGAAALLIGSRAAGEKYGLKPMARILSSAAAGVEPRIMGIGPVEAIKKALARAGLTLDD 315 (401)
T ss_pred cCCCCC-CCCCccCCcCCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEeccCCccccchHHHHHHHHHHHcCCCHHH
Confidence 999999 4599999999999999999999999999999999999999999999888888889999999999999999999
Q ss_pred ccEEEecCCCHHHHHHHHHHcCCC--CCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeE
Q 012506 355 IDLFEINEAFASQFVYCRNKLGLD--PEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGA 432 (462)
Q Consensus 355 ID~~eihdafa~~~~~~~e~LGl~--~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~ 432 (462)
||++|+||+|+++++.++|.|||+ ..|||++||++++|||+||||+++++|+++||+++++ +++++++|+|+|+|.
T Consensus 316 id~~ei~d~Fa~~~l~~~e~lg~~~~~~~vN~~GG~la~GhP~gAtG~~~~~el~~qL~~~~~--~~~~~~~~~ggg~g~ 393 (401)
T PRK08131 316 MDIIEINEAFASQVLGCLKGLGVDFDDPRVNPNGGAIAVGHPLGASGARLALTAARELQRRGK--RYAVVSLCIGVGQGL 393 (401)
T ss_pred CCeehhccHHHHHHHHHHHHcCCCCCCCCccCCccHHhcCCchhhhHHHHHHHHHHHHHhcCC--CceEEEEEecCChhh
Confidence 999999999999999999999997 4589999999999999999999999999999999977 899999999999999
Q ss_pred EEEEEec
Q 012506 433 AAVFERG 439 (462)
Q Consensus 433 A~v~~~~ 439 (462)
|+|||+.
T Consensus 394 a~i~e~~ 400 (401)
T PRK08131 394 AMVIERV 400 (401)
T ss_pred EEEEEec
Confidence 9999984
|
|
| >TIGR02446 FadI fatty oxidation complex, beta subunit FadI | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-74 Score=596.60 Aligned_cols=379 Identities=34% Similarity=0.555 Sum_probs=338.8
Q ss_pred CCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCC
Q 012506 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (462)
Q Consensus 49 ~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~ 128 (462)
.++|||||++||||+| ++|.+++.++.+|+.++++++|++++|++++||.+++|++.+... +.+.++.+++.+|+|..
T Consensus 6 ~~~V~Ivg~~rTpfgk-~~g~~~~~~~~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~-~~~~ar~~~l~aGl~~~ 83 (430)
T TIGR02446 6 GERIAIVAGLRTPFAR-QATAFHGIPAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPE-APNIAREIVLGTGMNVH 83 (430)
T ss_pred CCCEEEEecccCcccc-CCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCc-cchHHHHHHHhCCCCCC
Confidence 4789999999999998 579999999999999999999999999999999999999887554 57899999999999878
Q ss_pred cceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCC-------------CChh--------hhh-h
Q 012506 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGS-------------VNPK--------VKA-F 186 (462)
Q Consensus 129 ~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~-------------~~~~--------~~~-~ 186 (462)
+|+++|+++|+||+.|+..|+++|++|++|++|++|+|+||+.|+..... .... +.+ .
T Consensus 84 ~p~~~V~~~CaSG~~A~~~a~~~I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (430)
T TIGR02446 84 TDAYSVTRACATSFQSAVNVAESIMAGAIDIGIAGGADSSSVLPIGVSKKLAASLVDLNKARTLGQKLKVFSRLGLKDLM 163 (430)
T ss_pred CchhhhhhhhhHHHHHHHHHHHHHHCCCCCEEEEeeeEcccCCcccccccccccccccccccccCccccccccchhhhhc
Confidence 99999999999999999999999999999999999999999866422110 0000 000 0
Q ss_pred h-h----hhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEecc
Q 012506 187 E-Q----AQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVD 261 (462)
Q Consensus 187 ~-~----~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d 261 (462)
+ . ...+...|++++++|+++||+|||+||+|+++||+||.+|+++|+|++||+|+.. ||++ .++++|
T Consensus 164 ~~~~~~~~~~~~~~m~~~ae~~a~~ygisre~~d~~Avksh~~a~~A~~~g~~~~ei~p~~~---np~a-----~~~~~D 235 (430)
T TIGR02446 164 PVPPAVAEYSTGLSMGQTAEQMAKTYGITRAEQDALAHRSHTLASQAWRDGKLAGEVMTAFP---PPYK-----QWIAED 235 (430)
T ss_pred ccCcccccccCCCcHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceeeeeee---cCCc-----eEeccc
Confidence 0 0 0011236999999999999999999999999999999999999999999999864 7765 258999
Q ss_pred CCCCCCCCHHHHhcCCCcccC-CCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCC-CCCCccHHH
Q 012506 262 DGIRPNTSVSELAKLKPVFKK-DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDP-AIMGVGPAV 339 (462)
Q Consensus 262 ~~~r~~~t~e~l~~~~p~f~p-~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p-~~~~~~~~~ 339 (462)
+.+|+++|+|+|.+++|+|+| .|++|.+|||+++|||+|+||++++.|++++.+|+++|.+++..+.+| ..+..++..
T Consensus 236 ~~~r~~~t~e~~~~~~~i~~p~~g~lt~~~~~~~~DGAaA~il~se~~A~~l~~~p~~~i~~~~~~~~~~~~~~~~~~~~ 315 (430)
T TIGR02446 236 NNIRHNSTLAGYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMREGRAKELGMEPLGYIRSYAFTAIDVWQDMLMGPSY 315 (430)
T ss_pred CCCCCCCCHHHHhcCCceecCCCCceechhcCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEeeccCchHhhcccHHH
Confidence 999999999999999999998 589999999999999999999999999999999999999999887777 356778888
Q ss_pred HHHHHHHHcCCCCCCccEEEecCCCHHHHHHHHHHcC-----------------CCCCCCCCCCCccccCCccchHHHHH
Q 012506 340 AIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLG-----------------LDPEKINVNGGALAIGHPLGTTGARC 402 (462)
Q Consensus 340 Ai~~aL~~AGl~~~DID~~eihdafa~~~~~~~e~LG-----------------l~~~~vn~~GG~~a~Ghp~gatG~~~ 402 (462)
+++++|+++||+++|||++|+||+|++++++++|.|| ++.+|||++||++++|||+||||+++
T Consensus 316 a~~~al~~Agl~~~Did~~Ei~daFa~~~l~~~e~lg~~~~~~~~~g~~~~~G~~~~~pvN~~GG~la~GhP~gatG~~~ 395 (430)
T TIGR02446 316 ATPLALQRAGLALSDLTLIDMHEAFAAQTLANVQMFASDKFAQENLGRSKAMGEIDMSKFNVLGGSIAYGHPFAATGARM 395 (430)
T ss_pred HHHHHHHHcCCCHHHCCEEEeccccHHHHHHHHHHhcCcchhhhcccccccCCCCCCCccCCCCCHHhcCCCccccHHHH
Confidence 9999999999999999999999999999999999997 66669999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEec
Q 012506 403 VATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFERG 439 (462)
Q Consensus 403 ~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~~ 439 (462)
++|+++||+++++ ++++.++|++||+|.++++|++
T Consensus 396 v~e~~~qL~g~ag--~~g~~~~~~~GG~g~a~iie~~ 430 (430)
T TIGR02446 396 ITQTLRELKRRGG--GLGLNTACAAGGLGAAMILEVE 430 (430)
T ss_pred HHHHHHHHhhcCC--CccEEEEEecCcceEEEEEEeC
Confidence 9999999999988 8999999999999999999975
|
This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli. |
| >PRK06445 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-74 Score=591.36 Aligned_cols=380 Identities=43% Similarity=0.696 Sum_probs=337.8
Q ss_pred CcEEEEEeeecccccCC-----CCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcC
Q 012506 50 DDVVIVAAYRTALCKSK-----RGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAG 124 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~-----~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~G 124 (462)
++|+|||++||||+|.. +|+|++.++.+|+.+|+++||+++||++++||.+++|++.+...+..+.++.+....+
T Consensus 2 ~~v~Ivg~~rTpfgk~~~~~~~~g~~~~~~~~~L~~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a~ 81 (394)
T PRK06445 2 EDVYLVDFARTAFSRFRPKDPQKDVFNNIRPEELAAMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLAR 81 (394)
T ss_pred CcEEEEecccCCccccCcCCCCCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHcC
Confidence 57999999999999843 5899999999999999999999999999999999999988754323466777777778
Q ss_pred CCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCC------CC--ChhhhhhhhhhcccccH
Q 012506 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEG------SV--NPKVKAFEQAQNCLLPM 196 (462)
Q Consensus 125 lp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~------~~--~~~~~~~~~~~~~~~~~ 196 (462)
++.+.|+++|+++|+||++++..|+++|++|.+|++|++|+|+||+.|+.... .. ++.+.. ++.. ....|
T Consensus 82 ~~~~~p~~~V~~~CaSg~~ai~~A~~~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~ 159 (394)
T PRK06445 82 LPYNIPAMAVDRQCASSLTTVSIGAMEIATGMADIVIAGGVEHMTRTPMGDNPHIEPNPKLLTDPKYIE-YDLT-TGYVM 159 (394)
T ss_pred CCCCCcchhhhhhhHHHHHHHHHHHHHHHcCCCCEEEEeeecccccCccccCccccCChhhccccccCc-cccc-CCCCH
Confidence 87779999999999999999999999999999999999999999976642100 00 111111 1111 12459
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcC
Q 012506 197 GVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKL 276 (462)
Q Consensus 197 g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~ 276 (462)
++++++|+++||+|||+||+|+++||+||.+|++.|+|++||+|+++. +.+ .++++++|+.+|+++|+|++.++
T Consensus 160 a~~a~~~~~~ygitre~~a~va~~sh~~A~~a~~~g~~~~ei~p~~~~----~~~--~~~~~npda~~r~~~t~e~~~~~ 233 (394)
T PRK06445 160 GLTAEKLAEEAGIKREEMDRWSLRSHQLAAKAIQEGYFKDEILPIEVE----VEG--KKKVVDVDQSVRPDTSLEKLAKL 233 (394)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeEEEec----CCC--CceeeCCCCCCCCCCCHHHHhcC
Confidence 999999999999999999999999999999999999999999999872 222 22567889999999999999999
Q ss_pred CCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCcc
Q 012506 277 KPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDID 356 (462)
Q Consensus 277 ~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID 356 (462)
+|+|+|+|++|.+|||+++|||+++||++++.|++++.+|+++|+|++....+|..++.++..+++++|+++||+++|||
T Consensus 234 ~~v~~~~g~lt~~~~~~~~DGAaavvl~s~~~A~~~~~~~~a~i~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~dId 313 (394)
T PRK06445 234 PPAFKPDGVITAGNSSPLNSGASYVLLMSKKAVKKYGLKPMAKIRSFGFAGVPPAIMGKGPVPASKKALEKAGLSVKDID 313 (394)
T ss_pred CCccCCCCcEecCcCCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEeccCCchhcchHHHHHHHHHHHcCCCHHHcC
Confidence 99999989999999999999999999999999999999999999999999888888888899999999999999999999
Q ss_pred EEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEE
Q 012506 357 LFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVF 436 (462)
Q Consensus 357 ~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~ 436 (462)
++|+||+|+++++.++|.||||++|||++||++++|||+||||+++++|+++||+.+++ ++||+++|+|+|+|.|+||
T Consensus 314 ~~e~~d~f~~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~~~--~~gl~~~~~~gg~g~a~~~ 391 (394)
T PRK06445 314 LWEINEAFAVVVLYAIKELGLDPETVNIKGGAIAIGHPLGATGARIVGTLARQLQIKGK--DYGVATLCVGGGQGGAVVL 391 (394)
T ss_pred EEEecccchHHHHHHHHHhCCCccccCCCCCHHHcCCCccchHHHHHHHHHHHHHhcCC--CEEEEEEcccCChhhEEEE
Confidence 99999999999999999999999999999999999999999999999999999997665 8999999999999999999
Q ss_pred Eec
Q 012506 437 ERG 439 (462)
Q Consensus 437 ~~~ 439 (462)
|+.
T Consensus 392 e~~ 394 (394)
T PRK06445 392 ERV 394 (394)
T ss_pred EcC
Confidence 973
|
|
| >PRK06954 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-73 Score=586.75 Aligned_cols=378 Identities=36% Similarity=0.532 Sum_probs=338.0
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
++|+|||++||||+| ++|.+++.++.||+.+|++++|+++|+++++||.+++|++.+.+. +.+..+..++.+|+|.++
T Consensus 7 ~~V~Ivg~~rTpf~k-~~g~~~~~~~~eL~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~-~~~~~~~~~l~ag~~~~~ 84 (397)
T PRK06954 7 DPIVIASAARTPMAA-FQGEFASLTAPQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQ-GQAPARQAALGAGLPLSV 84 (397)
T ss_pred CCEEEEecccCCccC-CCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCcc-chHHHHHHHHcCCCCCCc
Confidence 689999999999998 568899999999999999999999999999999999999886654 667788888889998779
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCC---CC--CC-hh-hh----hh-hhhhcccccHH
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWE---GS--VN-PK-VK----AF-EQAQNCLLPMG 197 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~---~~--~~-~~-~~----~~-~~~~~~~~~~g 197 (462)
|+++|+++|+||++|+..|+++|++|++|++|++|+|+||+.++... .. +. .. +. +. .+.......|+
T Consensus 85 p~~~V~~aCaSG~~Av~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (397)
T PRK06954 85 GCTTVNKMCGSGMRAAMFAHDMLVAGSVDVIVAGGMESMTNAPYLLPKARGGMRMGHGQVLDHMFLDGLEDAYDKGRLMG 164 (397)
T ss_pred cEeeccccchHHHHHHHHHHHHHHCCCCCEEEEEeeeccCCCcccCcccccccccCcchhhhhhcccccccccccCCCHH
Confidence 99999999999999999999999999999999999999997664211 00 00 00 11 11 11111235799
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCC
Q 012506 198 VTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLK 277 (462)
Q Consensus 198 ~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~ 277 (462)
+++++|+++||+|||+||+|+++||+|+.+++..|+|++||+|+++..+ . ...+|++|+++| .++.|.+.+++
T Consensus 165 ~~a~~~~~~ygitre~~d~~A~~s~~~a~~a~~~~~~~~~~~pv~v~~~--~----~~~~v~~D~~pr-~~~~~~l~~l~ 237 (397)
T PRK06954 165 TFAEECAGEYGFTREAQDAFAIESLARAKRANEDGSFAWEIAPVTVAGK--K----GDTVIDRDEQPF-KANPEKIPTLK 237 (397)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeEEeccC--C----CCeEeccCCCcC-CCCHHHHhCCC
Confidence 9999999999999999999999999999999999999999999976421 1 113689999999 49999999999
Q ss_pred CcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccE
Q 012506 278 PVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDL 357 (462)
Q Consensus 278 p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~ 357 (462)
|+|+|+|++|.+|||+++|||+++||+++++|++++.+|++++++++.....|..+..++..+++++|+++||+++|||+
T Consensus 238 ~~f~~~g~lt~~~~~~~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~Did~ 317 (397)
T PRK06954 238 PAFSKTGTVTAANSSSISDGAAALVMMRASTAKRLGLAPLARVVGHSTFAQAPSKFTTAPVGAIRKLFEKNGWRAAEVDL 317 (397)
T ss_pred CccCCCCcEEccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEecccCcccccchHHHHHHHHHHHcCCCHHHCCE
Confidence 99999999999999999999999999999999999999999999998877788778888899999999999999999999
Q ss_pred EEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEE
Q 012506 358 FEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 437 (462)
Q Consensus 358 ~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~ 437 (462)
+|+||+|++++++++|+|||+++|||++||++++|||+||||+++++++++||+++++ +++|+++|+|||+|.|+|||
T Consensus 318 ~ei~d~fa~~~l~~~e~lg~~~~~vN~~GG~~a~Ghp~gasG~~~~~~~~~qL~~~~g--~~~v~~~c~~gg~g~a~~~e 395 (397)
T PRK06954 318 FEINEAFAVVTMAAMKEHGLPHEKVNVNGGACALGHPIGASGARILVTLIGALRARGG--KRGVASLCIGGGEATAMGIE 395 (397)
T ss_pred EehhhHHHHHHHHHHHHhCCCcccCCcCCChHHhcccHHHHHHHHHHHHHHHHHhcCC--CeEEEEEccccchhhEEEEE
Confidence 9999999999999999999999999999999999999999999999999999999988 89999999999999999999
Q ss_pred e
Q 012506 438 R 438 (462)
Q Consensus 438 ~ 438 (462)
+
T Consensus 396 ~ 396 (397)
T PRK06954 396 L 396 (397)
T ss_pred e
Confidence 7
|
|
| >KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-74 Score=533.47 Aligned_cols=381 Identities=40% Similarity=0.636 Sum_probs=354.1
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
.-|+||++-||+|+- +.|.+++.+..||..-|++.||+.+++.++.||.+|+|+++..++++.+.+|.+.+..|+|.++
T Consensus 4 kgvfiVaAKRTaFGt-fGG~LKg~~aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~aSSsDgIYl~RHvGL~~GvP~e~ 82 (396)
T KOG1391|consen 4 KGVFIVAAKRTAFGT-FGGKLKGLSATDLGVVAAKAALKAANVGAEAVDHVIMGNVLASSSDGIYLARHVGLRVGVPKET 82 (396)
T ss_pred ceEEEEEeccccccc-ccccccCcchhhHHHHHHHHHHhhcCCChhhcceEEEeeeeeccCCceEeeeccccccCCcCcc
Confidence 469999999999995 8899999999999999999999999999999999999999988888899999999999999999
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCC-----CCCCC------hhhhhhhhhhcccccHHH
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAW-----EGSVN------PKVKAFEQAQNCLLPMGV 198 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~-----~~~~~------~~~~~~~~~~~~~~~~g~ 198 (462)
|+.+||+.|.||-++|..+++.|.-|+.+++|++|+|+||..|+-. +.... ..+|..-....+..||++
T Consensus 83 pALtiNRLCGSGFQsiVNgaQ~I~vgea~ivL~GGtEnMSq~Pf~vRnvRFGT~LG~~y~lED~LW~sLtD~y~kLpMa~ 162 (396)
T KOG1391|consen 83 PALTINRLCGSGFQSIVNGAQEICVGEAEIVLCGGTENMSQAPFCVRNVRFGTKLGSDYKLEDSLWVSLTDQYVKLPMAM 162 (396)
T ss_pred CceeehhhhcccHHHHHhhHHHhhcCcceEEEecCccccccCcceeeeeeeccccccccchhhhHhhhccchhhhcchhh
Confidence 9999999999999999999999999999999999999999998732 22211 122222223457789999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCC
Q 012506 199 TSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKP 278 (462)
Q Consensus 199 ~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p 278 (462)
++|++..+|.||||+.|+|+..|.+++.+++++|+|++||+|+++|.+.. +.+..-||.+|+.+|+|+|.+++|
T Consensus 163 TAEnL~~qyKisRee~DefaL~SQ~~Wkkaq~aG~fn~Ei~pI~~K~kkg------e~~f~vDEHpRp~TT~E~L~KLpp 236 (396)
T KOG1391|consen 163 TAENLAVQYKISREECDEFALQSQQRWKKAQDAGYFNDEIAPIEVKTKKG------EQTFQVDEHPRPQTTLEQLQKLPP 236 (396)
T ss_pred hHHHhhhhheecHHHhhHHHhhhHHHHHhhhhcCcccccccceEEeeccC------ceeeEecCCCCccchHHHHhhCCc
Confidence 99999999999999999999999999999999999999999999876432 234556999999999999999999
Q ss_pred cccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccEE
Q 012506 279 VFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLF 358 (462)
Q Consensus 279 ~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~ 358 (462)
+|+++|.+|++|+|-++|||+|||+.+++..++++++|++++++|.+.+++|.+|+++|.+||+.+|+++|++.+|||+|
T Consensus 237 vFkKdG~VtAGnASGi~DGA~AvivAsEdavK~~NlkPLARiVays~vGcdP~IMGIGPvPAI~~vLKksGlkl~DiDl~ 316 (396)
T KOG1391|consen 237 VFKKDGTVTAGNASGIADGAGAVIVASEDAVKKHNLKPLARIVAYSVVGCDPSIMGIGPVPAISGVLKKSGLKLKDIDLV 316 (396)
T ss_pred hhccCCeeeccccccccCCceeEEEechhHHhhcCCchhhhhheeeeeccChhhccccCcHHHHHHHHHcCCcccccceE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEe
Q 012506 359 EINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 359 eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
|+||+|+.+.+.+.+.|+|+-.++|++||+|++|||+|++|.|....++++|+++++ +||+-+.|+|||+|.|++++.
T Consensus 317 EvNEAFApQ~LAv~r~L~ld~sKlNVNGGAIALGHPLgaSGsRIt~HlVHEL~Rr~~--KYgiGSACIGGGQGIA~l~e~ 394 (396)
T KOG1391|consen 317 EVNEAFAPQYLAVERSLDLDISKLNVNGGAIALGHPLGASGSRITAHLVHELRRRGG--KYGIGSACIGGGQGIAVLIES 394 (396)
T ss_pred EechhhchHHHHHHHhhCCChhhccccCceeeccCccccCcchhhHHHHHHHHHcCC--ccccccccccCCceEEEEEEe
Confidence 999999999999999999999999999999999999999999999999999999998 999999999999999999986
Q ss_pred c
Q 012506 439 G 439 (462)
Q Consensus 439 ~ 439 (462)
.
T Consensus 395 ~ 395 (396)
T KOG1391|consen 395 T 395 (396)
T ss_pred c
Confidence 4
|
|
| >PRK08170 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-72 Score=586.66 Aligned_cols=376 Identities=39% Similarity=0.646 Sum_probs=329.8
Q ss_pred CCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCC
Q 012506 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (462)
Q Consensus 49 ~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~ 128 (462)
+++|+|||++||||+| ++|.+++.++.+|+.+|+++||+++|+++++||.+++|++.+... ..+.++.++..+|+|.+
T Consensus 2 ~~~v~Ivg~~rTp~g~-~~g~~~~~~~~~L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~-~~~~a~~v~~~lGl~~~ 79 (426)
T PRK08170 2 ARPVYIVDGARTPFLK-ARGGPGPFSASDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPD-EANIARVVALRLGCGEK 79 (426)
T ss_pred CCcEEEEecCCCCccC-CCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCC-cChHHHHHHHHhCcCCC
Confidence 3679999999999998 467788899999999999999999999999999999998875443 45788999999999767
Q ss_pred cceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCC-----------------CCC------hhhhh
Q 012506 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEG-----------------SVN------PKVKA 185 (462)
Q Consensus 129 ~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~-----------------~~~------~~~~~ 185 (462)
+|.++|+++|+|+++++..|+++|++|.+|++|++|+|+||+.|+.... .+. ..+..
T Consensus 80 ~p~~~v~~~CaSg~~al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (426)
T PRK08170 80 VPAWTVQRNCASGMQALDSAAANIALGRADLVLAGGVEAMSHAPLLFSEKMVRWLAGWYAAKSIGQKLAALGKLRPSYLA 159 (426)
T ss_pred ceeeeccchhhHHHHHHHHHHHHHHCCCCCEEEEEEEecccCCccccccccccchhccccccccCccccccccccccccc
Confidence 8999999999999999999999999999999999999999986531100 000 00100
Q ss_pred h-----hhhhccc--ccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEE
Q 012506 186 F-----EQAQNCL--LPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTI 258 (462)
Q Consensus 186 ~-----~~~~~~~--~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v 258 (462)
+ +...++. ..|++++++|+++||+|||+||+|+++||+||.+|++.|+|+ ||+||+.+..|| +
T Consensus 160 ~~~~~~~g~~~~~~~~~~a~~a~~~~~~ygitre~~a~vav~s~~~a~~A~~~g~~~-~i~pv~~~~~np---------~ 229 (426)
T PRK08170 160 PVIGLLRGLTDPVVGLNMGQTAEVLAHRFGITREQMDAYAARSHQRLAAAQAEGRLK-EVVPLFDRDGKF---------Y 229 (426)
T ss_pred cccccCccccccccCcCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcc-eEeeeecCCCCe---------e
Confidence 0 0001111 479999999999999999999999999999999999999998 999997322244 4
Q ss_pred eccCCCCCCCCHHHHhcCCCccc-CCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccH
Q 012506 259 SVDDGIRPNTSVSELAKLKPVFK-KDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGP 337 (462)
Q Consensus 259 ~~d~~~r~~~t~e~l~~~~p~f~-p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~ 337 (462)
..||++|+++|+|+|+++||+|+ |.|++|.+|||+++|||+|+||+++|.|++++.+|++++++++....+|..++.++
T Consensus 230 a~de~~r~~~t~e~~~~~~~v~~~p~~~lt~~~~s~~~DGAaA~vl~s~e~A~~~~~~p~~~i~~~~~~~~~~~~~~~~~ 309 (426)
T PRK08170 230 DHDDGVRPDSSMEKLAKLKPFFDRPYGRVTAGNSSQITDGACWLLLASEEAVKKYGLPPLGRIVDSQWAALDPSQMGLGP 309 (426)
T ss_pred ccCCCCCCCCCHHHHhcCCCcccCCCCCEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEeeEeeeCchhhcccH
Confidence 56999999999999999999998 77899999999999999999999999999999999999999999888898888888
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCCHHHHHHHHH---HcCCCC--------------CCCCCCCCccccCCccchHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRN---KLGLDP--------------EKINVNGGALAIGHPLGTTGA 400 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~~~e---~LGl~~--------------~~vn~~GG~~a~Ghp~gatG~ 400 (462)
..+++++|+++||+++|||++|+||+|+++++.+++ .||||+ .|||++||.+++|||+||||+
T Consensus 310 ~~a~~~al~~aGl~~~did~~ei~daFa~~~l~~l~~le~lGf~~~G~g~~~~~G~~~~~pvN~~GG~la~GHP~GAtG~ 389 (426)
T PRK08170 310 VHAATPLLQRHGLTLEDLDLWEINEAFAAQVLACLAAWADEEYCREQLGLDGALGELDRERLNVDGGAIALGHPVGASGA 389 (426)
T ss_pred HHHHHHHHHHcCCCHHHcCEEEecchhHHHHHHHHHHhccccchhcccccccccCCCCcceecCCCCHHHhCCCccCccH
Confidence 899999999999999999999999999999996665 666654 499999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEe
Q 012506 401 RCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 401 ~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
+++.++++||+++.+ ++||+++|+|||+|.|+|||+
T Consensus 390 ~~~~~l~~~l~~~~~--~~g~~~~c~~gg~g~a~~~e~ 425 (426)
T PRK08170 390 RIVLHLLHALKRRGT--KRGIAAICIGGGQGGAMLLER 425 (426)
T ss_pred HHHHHHHHHHHhhCC--CeEEEEEecCCChhheEEEEe
Confidence 999999999999877 899999999999999999997
|
|
| >PRK09268 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-72 Score=581.80 Aligned_cols=372 Identities=34% Similarity=0.553 Sum_probs=325.8
Q ss_pred CCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCC
Q 012506 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (462)
Q Consensus 49 ~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~ 128 (462)
|++|+|||++||||+| ++|.|.+.++.||+.+|++++|+++++++++||.+++|++.+... +.+.++.+++..|++..
T Consensus 6 m~~V~Ivg~~rTpfg~-~~g~l~~~~~~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~~~-~~~~~r~~~l~~gl~~~ 83 (427)
T PRK09268 6 VRRVAILGGNRIPFAR-SNGAYADASNQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSR-DFNLTRECVLGSALSPY 83 (427)
T ss_pred CCCEEEEecCcCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCc-cccHHHHHHHHcCCCCC
Confidence 4789999999999998 568899999999999999999999999999999999999987543 57789999999999767
Q ss_pred cceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCC-------------CC----------hhhh-
Q 012506 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGS-------------VN----------PKVK- 184 (462)
Q Consensus 129 ~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~-------------~~----------~~~~- 184 (462)
+|.++|+++|+||++++..|+++|++|.+|++||+|+|+||+.|+.+... +. +.+.
T Consensus 84 ~p~~~V~~~CaSG~~ai~~A~~~I~sG~~d~vlvgG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (427)
T PRK09268 84 TPAYDLQQACGTGLEAAILVANKIALGQIDSGIAGGVDTTSDAPIAVNEGLRKILLELNRAKTTGDRLKALGKLRPKHLA 163 (427)
T ss_pred CceeeeechhhHHHHHHHHHHHHHHCCCCCEEEEeeEEccCCCcccccccccccccccccccccCccccccccccccccc
Confidence 99999999999999999999999999999999999999999876532110 00 0000
Q ss_pred -hhhhhh--cccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEecc
Q 012506 185 -AFEQAQ--NCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVD 261 (462)
Q Consensus 185 -~~~~~~--~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d 261 (462)
..+... .....|+.++++|+++||+|||+||+|+++||+||.+|+++|+|++||.|+. + +++|
T Consensus 164 ~~~~~~~~~~~~~~m~~~ae~~a~~ygisre~~d~~Avksh~~A~~A~~~g~~~~einP~~--------~------~~~D 229 (427)
T PRK09268 164 PEIPRNGEPRTGLSMGEHAAITAKEWGISREAQDELAAASHQNLAAAYDRGFFDDLITPFL--------G------LTRD 229 (427)
T ss_pred ccCccccccccCCcHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccCcc--------C------cccC
Confidence 000111 1124699999999999999999999999999999999999999999997752 1 6779
Q ss_pred CCCCCCCCHHHHhcCCCcccC--CCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCC----CCCCc
Q 012506 262 DGIRPNTSVSELAKLKPVFKK--DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDP----AIMGV 335 (462)
Q Consensus 262 ~~~r~~~t~e~l~~~~p~f~p--~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p----~~~~~ 335 (462)
+.+|+++|+|+|+++||+|+| +|++|.+|||+++|||+|+||++++.|++++.+|+.++..+...+.+| ..+..
T Consensus 230 ~~~r~~~t~e~l~~~~~v~~p~~~g~lt~~n~~~~~DGAaAvvl~s~~~A~~l~~~p~~~i~~~~~~~~~~~~~~~~~~~ 309 (427)
T PRK09268 230 NNLRPDSSLEKLAKLKPVFGKGGRATMTAGNSTPLTDGASVVLLASEEWAAEHGLPVLAYLVDAETAAVDFVHGKEGLLM 309 (427)
T ss_pred CCCCCCCCHHHHhCCCcccccCCCCceeccccCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEEEcCCcccccchhhc
Confidence 999999999999999999998 799999999999999999999999999999999987775555555554 34667
Q ss_pred cHHHHHHHHHHHcCCCCCCccEEEecCCCHHHHHHHH---HHcCCCC--------------CCCCCCCCccccCCccchH
Q 012506 336 GPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCR---NKLGLDP--------------EKINVNGGALAIGHPLGTT 398 (462)
Q Consensus 336 ~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~~~---e~LGl~~--------------~~vn~~GG~~a~Ghp~gat 398 (462)
++..+++++|+++||+++|||++|+||+|+++.++++ |.||||+ .|||++||.+++|||+|||
T Consensus 310 ~~~~a~~~a~~~AGl~~~Did~~Ei~d~Fa~~~l~~l~~~e~lG~~~~g~g~~~~~G~~~~~pvN~~GG~la~GhP~gAT 389 (427)
T PRK09268 310 APAYAVPRLLARNGLTLQDFDFYEIHEAFASQVLATLKAWEDEEYCRERLGLDAPLGSIDRSKLNVNGSSLAAGHPFAAT 389 (427)
T ss_pred cHHHHHHHHHHHcCCCHHHCCEEEeccccHHHHHHHHHHhhhccccccccccccccCcCCCcccCCCcCHHhcCCCcccc
Confidence 8888999999999999999999999999999977666 8888873 3899999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEe
Q 012506 399 GARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 399 G~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
|+++++|+++||+++++ ++||+++|+|||+|.|+|||+
T Consensus 390 G~~~v~e~~~QL~~~~~--~~gl~~~c~~gG~g~a~~~e~ 427 (427)
T PRK09268 390 GGRIVATLAKLLAEKGS--GRGLISICAAGGQGVTAILER 427 (427)
T ss_pred hHHHHHHHHHHHHhcCC--CEEEEEEcccCchheEEEEeC
Confidence 99999999999999988 999999999999999999985
|
|
| >PRK05790 putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-71 Score=569.64 Aligned_cols=381 Identities=48% Similarity=0.745 Sum_probs=338.5
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
++|+|||++||||+| ..|.+++.++.+|+.+|+++||+|+||++++||.+++|++.+... ++++++.++..+|++.+.
T Consensus 2 ~~v~IvG~~~tp~~r-~~g~~~~~~~~~La~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~-~~~~~~~~~~~~gl~~~~ 79 (393)
T PRK05790 2 KDVVIVSAARTPIGK-FGGALKDVSAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGA-GQNPARQAALKAGLPVEV 79 (393)
T ss_pred CceEEEeeecCCccC-CCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCeEEEEEecCCCC-CCcHHHHHHHHcCCCCCC
Confidence 579999999999998 567888999999999999999999999999999999999876553 567777788889997568
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCC-----CCCC-hhhhhh--hh-hhcc--cccHHH
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWE-----GSVN-PKVKAF--EQ-AQNC--LLPMGV 198 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~-----~~~~-~~~~~~--~~-~~~~--~~~~g~ 198 (462)
|.++++.+|+|++++|..|+++|++|++|+||++|+|+||+.|..+. ..+. +...+. ++ ..+. ...|++
T Consensus 80 ~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 159 (393)
T PRK05790 80 PALTINKVCGSGLKAVALAAQAIRAGDADIVVAGGQESMSQAPHVLPGSRWGQKMGDVELVDTMIHDGLTDAFNGYHMGI 159 (393)
T ss_pred ceeeecccchHHHHHHHHHHHHHHcCCCCEEEEEeeeccccCcccccccccccccCcchhhhhhcccccccccCCCCHHH
Confidence 99999999999999999999999999999999999999998764211 0111 001110 01 0111 246999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCC
Q 012506 199 TSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKP 278 (462)
Q Consensus 199 ~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p 278 (462)
.+++|+++||++||+|++|++++|+||.+|+++|+|++||+|+....+ .+++++++.|+.+|.++|.|++.+++|
T Consensus 160 ~a~~y~~~yG~tre~la~vav~~~~~A~~~~~~g~~~~~i~P~~~~~~-----~~~~~~~~~d~~~~~~~~~e~l~~~~~ 234 (393)
T PRK05790 160 TAENLAEQYGITREEQDEFALASQQKAEAAIKAGRFKDEIVPVTIKQR-----KGDPVVVDTDEHPRPDTTAESLAKLRP 234 (393)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeeEEecCC-----CCCceEecCCCCCCCCCCHHHHhCCCC
Confidence 999999999999999999999999999999999999999999876421 133456899999999999999999999
Q ss_pred cccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccEE
Q 012506 279 VFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLF 358 (462)
Q Consensus 279 ~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~ 358 (462)
+|+|+|++|.+|||+++|||+++||++++.|++++.+|+++|+|++..+.+|..++.++..+++++|+++||+++|||++
T Consensus 235 v~~~~g~lt~~d~~~~~DGAaavvl~s~e~a~~~~~~~~~~I~g~~~~~~~~~~~~~~~~~a~~~a~~~Agi~~~did~~ 314 (393)
T PRK05790 235 AFDKDGTVTAGNASGINDGAAAVVVMSEAKAKELGLTPLARIVSYAVAGVDPAIMGIGPVPAIRKALEKAGWSLADLDLI 314 (393)
T ss_pred ccCCCCCEeCCcCCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEccCCCCccchhHHHHHHHHHHHcCCCHHHCCEE
Confidence 99998999999999999999999999999999999999999999999888887777788889999999999999999999
Q ss_pred EecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEe
Q 012506 359 EINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 359 eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
|+||+|++++++++|.||||+.|||++||++++|||+||||+++++|+++||+++++ ++||+++|+|+|+|.++|||+
T Consensus 315 e~~d~f~~~~l~~~e~lg~~~~pvN~~GG~l~~Ghp~gatG~~~~~e~~~qL~~~~~--~~gl~~~~~~~g~g~~~~~e~ 392 (393)
T PRK05790 315 EINEAFAAQALAVEKELGLDPEKVNVNGGAIALGHPIGASGARILVTLLHEMKRRGA--KKGLATLCIGGGQGVALIVER 392 (393)
T ss_pred EeCcHHHHHHHHHHHHhCCChhhcCCCcchhhhCcchhhhHHHHHHHHHHHHHhcCC--CeEEEEEeccCCceeEEEEEc
Confidence 999999999999999999999999999999999999999999999999999999876 999999999999999999997
Q ss_pred c
Q 012506 439 G 439 (462)
Q Consensus 439 ~ 439 (462)
+
T Consensus 393 ~ 393 (393)
T PRK05790 393 P 393 (393)
T ss_pred C
Confidence 4
|
|
| >PRK06690 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-70 Score=553.75 Aligned_cols=358 Identities=37% Similarity=0.599 Sum_probs=325.9
Q ss_pred cEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcc
Q 012506 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP 130 (462)
Q Consensus 51 ~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p 130 (462)
+|+|+|++||||+| +.|.+++.++.+|+..+++++++ |++ ++||.+++|++.+. +.+.+|.+++.+|+|.++|
T Consensus 2 ~v~Ivg~~rTpfg~-~~g~~~~~~~~~L~~~a~~~~~~--gi~-~~Id~vi~G~~~~~---~~~~~r~~~~~~Gl~~~~p 74 (361)
T PRK06690 2 RAVIVEAKRTPIGK-KNGMLKDYEVQQLAAPLLTFLSK--GME-REIDDVILGNVVGP---GGNVARLSALEAGLGLHIP 74 (361)
T ss_pred cEEEEecccCCccC-CCCccCCCCHHHHHHHHHHHHHc--cch-hhcCEEEEEecCCC---cchHHHHHHHHcCCCCCCC
Confidence 59999999999998 67999999999999999999855 896 89999999998654 3577888999999987899
Q ss_pred eEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCC
Q 012506 131 VRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVT 210 (462)
Q Consensus 131 ~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gis 210 (462)
+++|+++|+||++|+..|++.|++|++|++|++|+|+||+.|+.....+.+ +.... ..|++++++|+++||++
T Consensus 75 ~~tV~~~CaSG~~Ai~~a~~~I~sG~~d~~l~gG~E~ms~~p~~~~~~~~~------~~~~~-~~~~~~a~~~~~~ygit 147 (361)
T PRK06690 75 GVTIDRQCGAGLEAIRTACHFIQGGAGKCYIAGGVESTSTSPFQNRARFSP------ETIGD-PDMGVAAEYVAERYNIT 147 (361)
T ss_pred ceehhhhhhHHHHHHHHHHHHHHCCCCCEEEEeccccccCCCcccccccCc------ccccC-ccHHHHHHHHHHHhCCC
Confidence 999999999999999999999999999999999999999877421111111 01111 24999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHH-hcCCCcccCCCCcccC
Q 012506 211 RKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSEL-AKLKPVFKKDGTTTAG 289 (462)
Q Consensus 211 re~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l-~~~~p~f~p~g~~t~~ 289 (462)
||+||+||..||+|+.+|+++|+|++||+|++. ++ |+.+|+.+|+|++ .+++|+|+|+|++|.+
T Consensus 148 re~~d~~A~~s~k~a~~a~~n~~~~~ei~~v~~--------------~~-d~~~r~~~~~e~ll~~l~p~~~~~g~lt~~ 212 (361)
T PRK06690 148 REMQDEYACLSYKRTLQALEKGYIHEEILSFNG--------------LL-DESIKKEMNYERIIKRTKPAFLHNGTVTAG 212 (361)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCceecccC--------------cc-ccccCCCCCHHHHhhcCCCcccCCCceecc
Confidence 999999999999999999999999999999751 34 8899999999999 6679999999999999
Q ss_pred CCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCCHHHHH
Q 012506 290 NSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFV 369 (462)
Q Consensus 290 ~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~ 369 (462)
|||+++|||+|+||++++.|++++.+|+++|++++..+.+|..+..++..+++++|+++||+++|||+||+||+|+++++
T Consensus 213 ~~~~~~DGAaAvvl~s~e~A~~lg~~p~~~i~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~Did~~ei~eafa~~~~ 292 (361)
T PRK06690 213 NSCGVNDGACAVLVMEEGQARKLGYKPVLRFVRSAVVGVDPNLPGTGPIFAVNKLLNEMNMKVEDIDYFEINEAFASKVV 292 (361)
T ss_pred ccCCCCCCeEEEEEecHHHHHHcCCCceEEEEEEEEeccCcccchhHHHHHHHHHHHHcCCCHHHcCEeeecchhHHHHH
Confidence 99999999999999999999999999999999999888888888888899999999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEec
Q 012506 370 YCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFERG 439 (462)
Q Consensus 370 ~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~~ 439 (462)
+++|.|||+++|+|++||++++|||+|+||+++++++++||+++++ ++|++++|+|||+|.|+|||+.
T Consensus 293 ~~~e~lgl~~~~vn~~GG~la~Ghp~GatG~~~~~~~~~ql~~~~~--~~g~~~~c~~gG~g~a~~~e~~ 360 (361)
T PRK06690 293 ACAKELQIPYEKLNVNGGAIALGHPYGASGAMLVTRLFYQAKREDM--KYGIATLGIGGGIGLALLFEKV 360 (361)
T ss_pred HHHHhcCCCchhcccCCcHHhccCchhhhHHHHHHHHHHHHHHhCC--CEEEEEEcccCcceeEEEEEec
Confidence 9999999999999999999999999999999999999999999877 9999999999999999999985
|
|
| >PRK07851 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-69 Score=555.98 Aligned_cols=378 Identities=40% Similarity=0.644 Sum_probs=335.6
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHc-CCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCC
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKT-NVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~a-gl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~ 128 (462)
.+|+|||++||||+|..+|.|++.++.||+.+|+++||+|+ ||++++||.+++|++.+...++++.++.++..+|++ .
T Consensus 2 ~~v~IvG~~~Tpfg~~~~g~~~~~~~~eL~~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl~-~ 80 (406)
T PRK07851 2 PEAVIVSTARSPIGRAFKGSLKDMRPDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGYD-F 80 (406)
T ss_pred CcEEEEecCCCCcccCCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCCC-C
Confidence 47999999999999855688899999999999999999997 999999999999987655443567788999999994 6
Q ss_pred cceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCC--------C--------------Chhhhhh
Q 012506 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGS--------V--------------NPKVKAF 186 (462)
Q Consensus 129 ~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~--------~--------------~~~~~~~ 186 (462)
+|.++|+++|+||+.++..|+++|++|.+|+|||+|+|+||..+...... + ++.|..+
T Consensus 81 ~p~~~v~~~caSG~~av~~Aa~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (406)
T PRK07851 81 LPGTTVNRYCSSSLQTTRMAFHAIKAGEGDVFISAGVETVSRFAKGNSDSLPDTKNPLFAEAQARTAARAEGGAEAWHDP 160 (406)
T ss_pred CCeeeeeccchhHHHHHHHHHHHHHCCCCCEEEEeeEEecccCcccccccccccCchhhhhccccccccccccccccccc
Confidence 89999999999999999999999999999999999999998765211000 0 0112121
Q ss_pred hh---hhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCC
Q 012506 187 EQ---AQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDG 263 (462)
Q Consensus 187 ~~---~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~ 263 (462)
.. .......||.++++|+++||++||+|++|++++|++|..|+++++|..+|+|+.+ |.+ +.+++|+.
T Consensus 161 ~g~~~~~~~~~amg~~a~~~~~~yg~~re~~~~~a~~s~~~a~~A~~n~~~a~~~~p~~~----p~~-----~~~~~d~~ 231 (406)
T PRK07851 161 REDGLLPDVYIAMGQTAENVAQLTGISREEQDEWGVRSQNRAEEAIANGFFEREITPVTL----PDG-----TVVSTDDG 231 (406)
T ss_pred ccccccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCccceeeeec----CCC-----ceeCCCCC
Confidence 10 1112456799999999999999999999999999999999999999999999864 432 24677889
Q ss_pred CCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHH
Q 012506 264 IRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPA 343 (462)
Q Consensus 264 ~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~ 343 (462)
+|+++|+|++.+++|+|+|.|.+|.+|||+++|||+|+||++++.|++++.+|+++|.|++.....|+.+..++..++++
T Consensus 232 ~r~~~t~e~v~~s~~v~~P~~~lt~~d~~~~~DGaaa~vl~s~e~A~~~~~~~~a~I~g~~~~~~~~~~~~~~~~~a~~~ 311 (406)
T PRK07851 232 PRAGTTYEKVSQLKPVFRPDGTVTAGNACPLNDGAAAVVIMSDTKARELGLTPLARIVSTGVSGLSPEIMGLGPVEASKQ 311 (406)
T ss_pred ccCCcCHHHHhcCCCccCCCCcEecCcCCccCCceeEEEEccHHHHHHcCCCccEEEEEEEEccCCCCccchhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998887777777788899999
Q ss_pred HHHHcCCCCCCccEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEE
Q 012506 344 AVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVIS 423 (462)
Q Consensus 344 aL~~AGl~~~DID~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~ 423 (462)
+|+++||+++|||++|+||+|++++++++|.||||++|+|++||++++|||+|+||+++++++++||+++++ ++||++
T Consensus 312 al~~Agi~~~did~~ei~d~f~~~~l~~le~lg~~~~pvN~~GG~l~~Ghp~gasg~~~~~~~~~qL~~~~~--~~g~~~ 389 (406)
T PRK07851 312 ALARAGMSIDDIDLVEINEAFAAQVLPSARELGIDEDKLNVSGGAIALGHPFGMTGARITTTLLNNLQTHDK--TFGLET 389 (406)
T ss_pred HHHHhCCCHHHCCeehhhhHHHHHHHHHHHHhCCCccccCCCCChHhhcCcHHHHHHHHHHHHHHHHHhcCC--CeEEEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999998877 899999
Q ss_pred eecccceeEEEEEEec
Q 012506 424 MCIGTGMGAAAVFERG 439 (462)
Q Consensus 424 ~~~G~G~g~A~v~~~~ 439 (462)
+|+|||+|+|+|||+.
T Consensus 390 ~~~~gg~g~a~~~e~~ 405 (406)
T PRK07851 390 MCVGGGQGMAMVLERL 405 (406)
T ss_pred EccccChhhEEEEEec
Confidence 9999999999999975
|
|
| >PLN02644 acetyl-CoA C-acetyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-68 Score=548.02 Aligned_cols=380 Identities=36% Similarity=0.566 Sum_probs=332.2
Q ss_pred cEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcc
Q 012506 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP 130 (462)
Q Consensus 51 ~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p 130 (462)
+|+|||++||||+| +.|.+++.++.+|+.+++++||+|+||++++||.+++|++..... +++.++.++..+|+|.+.|
T Consensus 2 ~v~IvG~~~Tp~g~-~~~~~~~~~~~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~-~~~~~~~~~~~~Gl~~~~p 79 (394)
T PLN02644 2 DVCIVGVARTPIGG-FLGSLSSLSATELGSIAIQAALERAGVDPALVQEVFFGNVLSANL-GQAPARQAALGAGLPPSTI 79 (394)
T ss_pred cEEEEeeccCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCc-CCcHHHHHHHhcCCCCCCc
Confidence 59999999999998 567888999999999999999999999999999999998765443 5567788999999976799
Q ss_pred eEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCC-----CCCC--h---hhh-hhhhhhcccccHHHH
Q 012506 131 VRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWE-----GSVN--P---KVK-AFEQAQNCLLPMGVT 199 (462)
Q Consensus 131 ~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~-----~~~~--~---~~~-~~~~~~~~~~~~g~~ 199 (462)
+++|+++|+||+.++.+|+++|++|++|+||++|+|+||+.+.... .... . .+. ...........|++.
T Consensus 80 ~~~v~~~caSg~~av~~Aa~~I~sG~~d~vlv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (394)
T PLN02644 80 CTTVNKVCASGMKAVMLAAQSIQLGINDVVVAGGMESMSNAPKYLPEARKGSRLGHDTVVDGMLKDGLWDVYNDFGMGVC 159 (394)
T ss_pred eEEEeccchHHHHHHHHHHHHHHcCCCCEEEEEeEEecCCCcccccccccccccccchhhhhccccccccccCCCcHHHH
Confidence 9999999999999999999999999999999999999997653111 0000 0 000 000001112458999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCC-ceEEeccCCCCCCCCHHHHhcCCC
Q 012506 200 SENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEK-PVTISVDDGIRPNTSVSELAKLKP 278 (462)
Q Consensus 200 a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~-~~~v~~d~~~r~~~t~e~l~~~~p 278 (462)
+++|+++||+|||++|+|++++|+|+.+|++.++|++||+|+++..+ .++ ..+++.|+.+| .++.+.|..++|
T Consensus 160 A~~~~~~yG~tre~la~vav~s~~~a~~a~~~~~~~~ei~~~~v~~~-----~~~~~~~~~~de~~~-~~~~~~l~~l~p 233 (394)
T PLN02644 160 AELCADQYSISREEQDAYAIQSYERAIAAQEAGAFAWEIVPVEVPGG-----RGRPSVIVDKDEGLG-KFDPAKLRKLRP 233 (394)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCCccceeeEEeccC-----CCCCceEeecCCCcC-CCCHHHHhCCCC
Confidence 99999999999999999999999999999999999999999986421 112 23478899997 789999999999
Q ss_pred cccC-CCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccE
Q 012506 279 VFKK-DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDL 357 (462)
Q Consensus 279 ~f~p-~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~ 357 (462)
+|++ +|.+|.+|||+++||++++||++++.|++++.+|+++|+|++.....|..+..++..+++++|+++||+++|||+
T Consensus 234 ~f~~~~g~vt~~~~~~~~DGaaavvl~s~~~A~~~~~~~~a~I~g~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~Did~ 313 (394)
T PLN02644 234 SFKEDGGSVTAGNASSISDGAAALVLVSGEKALELGLQVIAKIRGYADAAQAPELFTTAPALAIPKALKHAGLEASQVDY 313 (394)
T ss_pred cccCCCCcEeccccCCCCcceEEEEeccHHHHHHCCCCeEEEEEEEEEcCCCCcccchhHHHHHHHHHHHcCCCHHHCCE
Confidence 9988 699999999999999999999999999999999999999999877666556667788999999999999999999
Q ss_pred EEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEE
Q 012506 358 FEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 437 (462)
Q Consensus 358 ~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~ 437 (462)
+|+||+|++++++++|.||||++|+|++||++++|||+||||+++++++++||+++++ ++||+++|+|||+|.|+|||
T Consensus 314 ~Ei~d~f~~~~l~~~e~lg~~~~~vN~~GG~l~~Ghp~gasG~~~~~~~~~~l~~~~~--~~g~~~~~~~gg~g~a~~~e 391 (394)
T PLN02644 314 YEINEAFSVVALANQKLLGLDPEKVNVHGGAVSLGHPIGCSGARILVTLLGVLRSKNG--KYGVAGICNGGGGASAIVVE 391 (394)
T ss_pred EEeCcHHHHHHHHHHHHhCCCccccCCCCChHhhCCCHHHHHHHHHHHHHHHHHhcCC--CeEEEEEeccCCceeEEEEE
Confidence 9999999999999999999999999999999999999999999999999999999877 89999999999999999999
Q ss_pred ecc
Q 012506 438 RGD 440 (462)
Q Consensus 438 ~~~ 440 (462)
+.|
T Consensus 392 ~~~ 394 (394)
T PLN02644 392 LMQ 394 (394)
T ss_pred ecC
Confidence 864
|
|
| >PRK07801 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-67 Score=540.28 Aligned_cols=368 Identities=39% Similarity=0.620 Sum_probs=320.1
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
++|+|||++||||+| +.|.+++.++.+|+.+|+++||+|+|+++++||.+++|++.....+..+.++.+.+..|++...
T Consensus 2 ~~v~Ivg~~~Tpf~~-~~~~~~~~~~~~L~~~a~~~al~dagl~~~~ID~vv~g~~~~~~~~~~~~~~~~~l~~gl~~~~ 80 (382)
T PRK07801 2 AEAYIVDAVRTPVGK-RKGGLAGVHPADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWLAAGLPEEV 80 (382)
T ss_pred CceEEEecccCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEeeccCCcccccHHHHHHHHcCCCCCC
Confidence 579999999999997 4567888999999999999999999999999999999987433322355788777889997678
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCC--C--CCC--CC------ChhhhhhhhhhcccccHH
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPM--A--WEG--SV------NPKVKAFEQAQNCLLPMG 197 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~--~--~~~--~~------~~~~~~~~~~~~~~~~~g 197 (462)
|.++|+++|+||+.++..|+++|++|++|+|||+|+|+||+.++ . +.. .. ...|.++. .. ...+++
T Consensus 81 p~~~v~~acaSg~~Av~~Aa~~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~-~~~~~~ 158 (382)
T PRK07801 81 PGVTVDRQCGSSQQAIHFAAQAVMSGTQDLVVAGGVQNMSQIPISSAMTAGEQLGFTSPFAESKGWLHRY-GD-QEVSQF 158 (382)
T ss_pred ceeeecchhhhHHHHHHHHHHHHHCCCCCEEEEcchhhhcCCcccccccccccccCCcccccCcchhhhc-cC-CCCCHH
Confidence 99999999999999999999999999999999999999987653 1 110 00 01121111 11 123455
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCC
Q 012506 198 VTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLK 277 (462)
Q Consensus 198 ~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~ 277 (462)
..+++|+++||++||+|++|++++|+||.+|+++|+|.++++|+.. +..|+++| .+|+|++.++|
T Consensus 159 ~~a~~~~~~yG~tre~~a~vav~~~~~a~~n~~ag~~~~~~~p~~~--------------~~~d~~~~-~~t~e~~~~~~ 223 (382)
T PRK07801 159 RGAELIAEKWGISREEMERFALESHRRAFAAIRAGRFDNEIVPVGG--------------VTVDEGPR-ETSLEKMAGLK 223 (382)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccccC--------------ccccCCcC-cCCHHHHhcCC
Confidence 5799999999999999999999999999999999999999988641 45689999 69999999999
Q ss_pred CcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccE
Q 012506 278 PVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDL 357 (462)
Q Consensus 278 p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~ 357 (462)
|++++ |++|.+|||+++|||+|+||+++|.|++++.+|.++|.+++....+|..+..++..+++++|+++||+++|||+
T Consensus 224 ~i~~~-~pl~~~d~~~~~DGaaa~il~s~e~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~~a~~~agi~~~did~ 302 (382)
T PRK07801 224 PLVEG-GRLTAAVASQISDGASAVLLASERAVKRHGLTPRARIHHLSVRGDDPVFMLTAPIPATRYALEKTGLSIDDIDV 302 (382)
T ss_pred CCCCC-CCcccccCCCCCCceEEEEEecHHHHHHCCCCccEEEEEEEEecCChHhhccChHHHHHHHHHHcCCCHHHcCE
Confidence 99942 67999999999999999999999999999998888999988776666556667788999999999999999999
Q ss_pred EEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEE
Q 012506 358 FEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 437 (462)
Q Consensus 358 ~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~ 437 (462)
+|+||+|+++++.++|+||||++|||++||++++|||+||||+++++|+++||++++. ++||+++|+|||++.++||+
T Consensus 303 ~e~~d~Fa~~~~~~~e~lG~~~~pvN~~GG~l~~Ghp~gasG~~~~~e~~~qL~~~~~--~~gl~~~~gggg~~~~~vl~ 380 (382)
T PRK07801 303 VEINEAFAPVVLAWLKETGADPAKVNPNGGAIALGHPLGATGAKLMTTLLHELERTGG--RYGLQTMCEGGGTANVTIIE 380 (382)
T ss_pred eeecccchHHHHHHHHHhCCCchhcCCCcchhhhcCcHHHHHHHHHHHHHHHHHhcCC--CEEEEEEcccccceeEEEEE
Confidence 9999999999999999999999999999999999999999999999999999999866 99999999999999999998
Q ss_pred e
Q 012506 438 R 438 (462)
Q Consensus 438 ~ 438 (462)
+
T Consensus 381 ~ 381 (382)
T PRK07801 381 R 381 (382)
T ss_pred e
Confidence 6
|
|
| >cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-67 Score=539.46 Aligned_cols=376 Identities=53% Similarity=0.828 Sum_probs=333.8
Q ss_pred EEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceE
Q 012506 53 VIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVR 132 (462)
Q Consensus 53 ~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~ 132 (462)
+|+|++||||+| +.+.+++.++.||+.+|+++||+++|+++++||.+++|+..++.. +++.++.++..+|++.+.|++
T Consensus 1 ~Ivg~~~Tpf~r-~~~~~~~~~~~~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~-~~~~a~~v~~~lGl~~~~~~~ 78 (386)
T cd00751 1 VIVSAVRTPIGR-FGGALKDVSADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGE-GQNPARQAALLAGLPESVPAT 78 (386)
T ss_pred CEEEeecCCccC-CCCCCCCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCC-CChHHHHHHHHcCCCCCCchh
Confidence 599999999998 457788899999999999999999999999999999998876665 667788899999996457999
Q ss_pred EecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCCh--------hhhhhhhhhc--ccccHHHHHHH
Q 012506 133 TVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNP--------KVKAFEQAQN--CLLPMGVTSEN 202 (462)
Q Consensus 133 ~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~--------~~~~~~~~~~--~~~~~g~~a~~ 202 (462)
+|+.+|+|++++|..|+++|++|.+|+||++|+|+||+.+......... .+..+..... ....|++.+++
T Consensus 79 ~v~~~c~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~ 158 (386)
T cd00751 79 TVNRVCGSGLQAVALAAQSIAAGEADVVVAGGVESMSRAPYLLPKARRGGRLGLNTLDGMLDDGLTDPFTGLSMGITAEN 158 (386)
T ss_pred hhccccHHHHHHHHHHHHHHHCCCCCeEEEeeeeccccCcccccccccccccCccccccccccccccccCCCCHHHHHHH
Confidence 9999999999999999999999999999999999998766432211110 1111111111 13458999999
Q ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC
Q 012506 203 VAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK 282 (462)
Q Consensus 203 ~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p 282 (462)
|+++||++||+|++|++++|+||.+|+..++|.+||+|+.++.+ ..+.++++|+.+|+++|+|++++++|+++|
T Consensus 159 ~~~~yg~tre~la~vav~~~~~a~~~~~~~~~~~~~~p~~~~~~------~~~~~~~~~a~~r~~~t~e~v~~s~~i~~p 232 (386)
T cd00751 159 VAEKYGISREEQDEFALRSHQRAAAAQEAGRFKDEIVPVEVPGR------KGPVVVDRDEGPRPDTTLEKLAKLKPAFKK 232 (386)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEEEEEeccC------CCCeEeCCCCCCCCCCCHHHHhCCCCCcCC
Confidence 99999999999999999999999999999999999999976421 123467889999999999999999999999
Q ss_pred CCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecC
Q 012506 283 DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINE 362 (462)
Q Consensus 283 ~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eihd 362 (462)
.|++|.+|||+++|||+++||++++.|++++.+|+++|+|++....+|..+..++..+++++|+++||+++|||++|+||
T Consensus 233 ~g~l~~~d~~~~~dGaaavvl~s~~~a~~~~~~~~~~I~g~~~~~~~~~~~~~~~~~a~~~a~~~Agi~~~did~~e~~d 312 (386)
T cd00751 233 DGTVTAGNASGINDGAAAVLLMSEEKAKELGLKPLARIVGYAVAGVDPAIMGIGPVPAIPKALKRAGLTLDDIDLIEINE 312 (386)
T ss_pred CCcEeCCcCCCCCcceEEEEEecHHHHHHCCCCeeEEEEEEEEccCCCcccchhHHHHHHHHHHHcCCCHHHcCEEEeec
Confidence 99999999999999999999999999999999999999999998888777777888999999999999999999999999
Q ss_pred CCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEe
Q 012506 363 AFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 363 afa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
+|+++++++.|.||+++.|+|++||++++|||+|+||+++++|+++||+++++ ++||+++|++||+|.++|||+
T Consensus 313 ~f~~~~~~~~e~lg~~~~pvn~~GG~l~~Gh~~gasG~~~~~e~~~qL~g~~~--~~gl~~~~~~gg~g~~~~ie~ 386 (386)
T cd00751 313 AFAAQALACLKELGLDPEKVNVNGGAIALGHPLGASGARIVVTLLHELKRRGG--RYGLATMCIGGGQGAAMVIER 386 (386)
T ss_pred hhHHHHHHHHHHhCCChhhcCCCcchHhhCccHHHHHHHHHHHHHHHHHhcCC--CEEEEEEcccccceEEEEEEC
Confidence 99999999999999999999999999999999999999999999999999977 999999999999999999986
|
They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-66 Score=533.74 Aligned_cols=374 Identities=51% Similarity=0.803 Sum_probs=329.9
Q ss_pred EEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEE
Q 012506 54 IVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRT 133 (462)
Q Consensus 54 Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~ 133 (462)
|||+++|||+| ..|.+++.++.+|+.+|+++||+|+|++++|||.+++++..+... .+++++.++..+|++.++|+++
T Consensus 1 IvG~~~tp~~~-~~g~~~~~t~~~La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~-~~~~a~~va~~lGl~~~~~~~~ 78 (386)
T TIGR01930 1 IVAAARTPIGK-FGGSLKDVSAEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGE-QQNIARQAALLAGLPESVPAYT 78 (386)
T ss_pred CcceecCCccC-CCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCC-CChHHHHHHHHcCCCCCceeee
Confidence 78999999997 467788999999999999999999999999999999998876554 4667888999999964589999
Q ss_pred ecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCC------CCC----hhhhhhhhhhcc--cccHHHHHH
Q 012506 134 VNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEG------SVN----PKVKAFEQAQNC--LLPMGVTSE 201 (462)
Q Consensus 134 v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~------~~~----~~~~~~~~~~~~--~~~~g~~a~ 201 (462)
|+++|+|+++++..|+++|++|.+|+||++|+|+||+.+..... ... ..|..+....++ ...|++.++
T Consensus 79 v~~~Casg~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~a~ 158 (386)
T TIGR01930 79 VNRQCASGLQAVILAAQLIRAGEADVVVAGGVESMSRVPYSLPRSRREGVDPGRFELEDQILKDGLTDPLNGLSMGLTAE 158 (386)
T ss_pred ecchhhHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCccccccccccccccCccccchhhcCccccccccCCCHHHHHH
Confidence 99999999999999999999999999999999999876532110 010 011111111111 246999999
Q ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCccc
Q 012506 202 NVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFK 281 (462)
Q Consensus 202 ~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~ 281 (462)
+|+++||++||+|+++++++|+||.+|+++|.|++||+|+.++. + +.+++|++|+.+|.++|+|++++++|+++
T Consensus 159 ~y~~~yG~t~e~la~vav~~~~~A~~n~~~g~~~~~i~P~a~~~--~----~~~~~~~~da~~r~~~t~e~v~~s~~i~~ 232 (386)
T TIGR01930 159 NLAKKYGISREEQDEYALRSHQRAAKAWEEGLFKDEIVPVSVKG--R----KGPVTVSTDEGIRPNTTLEKLAKLKPAFD 232 (386)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEecc--C----CCCeEeCCCCCCCCCCCHHHHhCCCCCcC
Confidence 99999999999999999999999999999999999999985432 1 12457889999999999999999999999
Q ss_pred CCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccEEEec
Q 012506 282 KDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEIN 361 (462)
Q Consensus 282 p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eih 361 (462)
|.|.+|.+|||+++|||+++||++++.|++++.+|+++|.|++.....|+.+..++..+++++|+++||+++|||++|+|
T Consensus 233 P~~~l~~~d~~~~~dGAaa~vl~s~~~A~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~a~~~a~~~Agi~~~did~~e~~ 312 (386)
T TIGR01930 233 PNGTVTAGNSSPLNDGAAALLLMSEERAKELGLTPLARIVSFAVAGVDPEIMGLGPVPAIPKALKKAGLSISDIDLFEIN 312 (386)
T ss_pred CCCeeeCCccCCCCcceeEEEEecHHHHHHCCCCccEEEEEEEEecCCCccccccHHHHHHHHHHHcCCCHHHCCeeehc
Confidence 98889999999999999999999999999999999999999999887777677778899999999999999999999999
Q ss_pred CCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEE
Q 012506 362 EAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 437 (462)
Q Consensus 362 dafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~ 437 (462)
|+|++.+++++|.||+...|||++||++++|||+|+||+++++|+++||++++. ++||++.|++||+|.++|||
T Consensus 313 d~fa~~~~~~~e~lG~~~~pvn~~GG~l~~Ghp~gasG~~~~~e~~~qL~g~~~--~~gl~~~~~~gG~g~~~~~e 386 (386)
T TIGR01930 313 EAFAAQVLACIKELGLDLEKVNVNGGAIALGHPLGASGARIVTTLLHELKRRGG--RYGLATICIGGGQGIAVILE 386 (386)
T ss_pred chhHHHHHHHHHHhCCChhhcCCCCChHhhCCcHHHHHHHHHHHHHHHHHhcCC--CEEEEEEeccCCceEEEEeC
Confidence 999999999999999988899999999999999999999999999999999865 99999999999999999986
|
This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt |
| >COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-61 Score=499.31 Aligned_cols=377 Identities=41% Similarity=0.594 Sum_probs=335.7
Q ss_pred CCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHc--CCCccccCcEEEEeccCCCCccccHHHHHHHHcCCC
Q 012506 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKT--NVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFP 126 (462)
Q Consensus 49 ~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~a--gl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp 126 (462)
+++|+|+|++||||++..+|.+++..+++|...+.+..+++. ++++.+||.+++|++.+.+.++++++|.+++.+|+|
T Consensus 1 ~~~v~Ivg~~rt~~g~~~~~s~~~l~~e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~g~~~~~~ar~~a~~aGl~ 80 (392)
T COG0183 1 MRDVAIVGAGRTPFGKFGDGSLAELAAEALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGLP 80 (392)
T ss_pred CceEEEEeeccCccccCCCCchhhcCHHHHHHHHHHHHhhhccccCCHHHhhhheeccccccccccccHHHHHHHHcCCC
Confidence 368999999999999854588999999999888888888654 788889999999999988755789999999999998
Q ss_pred CCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCC-CCCCCC-----ChhhhhhhhhhcccccHHHHH
Q 012506 127 ETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPM-AWEGSV-----NPKVKAFEQAQNCLLPMGVTS 200 (462)
Q Consensus 127 ~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~-~~~~~~-----~~~~~~~~~~~~~~~~~g~~a 200 (462)
.++|.++||++|+||++|+..|+++|++|.+|++|++|+|+||+.|+ .+...+ ++.+.+..........||+++
T Consensus 81 ~~~p~~~V~~~c~SG~~Av~~A~~~I~sG~~dvvlagG~E~mS~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~g~~A 160 (392)
T COG0183 81 GSVPAVTVNRACASGLAAVRLAAQAIASGEADVVLAGGVEKMSDAPMGREGVRVLDSAVDPMFEDPLGDATPGYLMGLTA 160 (392)
T ss_pred CCCCceEEeccchhHHHHHHHHHHHHHCCCCCEEEEEeeeeccCCCccccchhhhhhhhhhccccccccccchhHHHHHH
Confidence 77999999999999999999999999999999999999999999887 333221 111222211122235799999
Q ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCC--CCHHHHhcCCC
Q 012506 201 ENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPN--TSVSELAKLKP 278 (462)
Q Consensus 201 ~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~--~t~e~l~~~~p 278 (462)
++|+++||+|||+||+|+++||+||.+|+++++| +||+|+++... .+..|+.+|.. ++.|.+.+++|
T Consensus 161 ~~~~~~yGitre~~d~~Av~sh~~A~~np~a~~~-~eI~~~~v~~~----------~~~~dp~~r~d~~~~~dg~a~l~~ 229 (392)
T COG0183 161 ERYAKRYGISREDQDEVAVKSHKNAAANPKAGFF-DEITPEDVLNS----------PVVADPLRRLDCSPTSDGAAALVP 229 (392)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHhhHhcCCC-CceeeEEecCC----------ceecCCcccCCCCCChhhhcCcee
Confidence 9999999999999999999999999999999999 99999987421 35678999998 99999999999
Q ss_pred cccCC-CCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCC-CCCcc
Q 012506 279 VFKKD-GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQ-LDDID 356 (462)
Q Consensus 279 ~f~p~-g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~-~~DID 356 (462)
+|++. |..|.+|.+++.||++++++++.+.+.++++++++++.++...+.+|..| ..+..+++++|+.++|. .+|||
T Consensus 230 a~~~~~g~~tagnas~i~dga~a~~~~~~~~~~~~~l~~~A~~~a~~~aGv~p~~~-~~~v~av~~~~~~~~l~~~edlg 308 (392)
T COG0183 230 AFEEVGGTVTAGNASGINDGAAALLLMSESKAKELGLAPLAAIRAYAMAGVDPSIM-DGPVAAVHDALTIAGLLALEDLG 308 (392)
T ss_pred ccccCCceEEEecccccccHHHHHHHhhHHHHHHCCCcHHHHHHHHHHhCCCcccc-cCCHHHHHHHHHHcCCchhhhcC
Confidence 99875 79999999999999999999999999999999999999999999999998 89999999999999999 99999
Q ss_pred EEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC--CCcEEEEEeecccc-eeEE
Q 012506 357 LFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR--DCRFGVISMCIGTG-MGAA 433 (462)
Q Consensus 357 ~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~--~~~~gl~~~~~G~G-~g~A 433 (462)
+||++|+|+.+.+.+.+.+|+ .|||++||++++|||+||||+++++|+++||+++.. ..+++++++|+||| +|.+
T Consensus 309 l~e~nEafa~~~~~~~~~~G~--~~VN~~GGaiA~GHPiGAtG~~~~~~l~~ql~~~~~~~~~~~g~~t~~~Ggg~~g~a 386 (392)
T COG0183 309 LAEKGEAFAAVALGVTKILGD--LPVNPSGGAIALGHPIGATGARILVELARQLRGRGQVVAKRRGLATLCIGGGGQGVA 386 (392)
T ss_pred ceecChHHHHHHHhhHHhcCC--ceeCCCcchhhcCCCccchHHHHHHHHHHHHhhccccccccceeeEEEecCcceeEE
Confidence 999999999999999999999 899999999999999999999999999999998432 12799999999999 9999
Q ss_pred EEEEec
Q 012506 434 AVFERG 439 (462)
Q Consensus 434 ~v~~~~ 439 (462)
+||++.
T Consensus 387 ~vl~~~ 392 (392)
T COG0183 387 AVLERV 392 (392)
T ss_pred EEEecC
Confidence 999863
|
|
| >PRK06157 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-59 Score=483.77 Aligned_cols=336 Identities=19% Similarity=0.284 Sum_probs=279.4
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
++|+|||+++|||+| +.+.++.+|+.+++++||+++||++++||.+++|++.....++ .....++..+|++ ..
T Consensus 7 ~~v~IvG~g~tp~~~-----~~~~~~~~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~-~~~~~~a~~lGl~-~~ 79 (398)
T PRK06157 7 DKVAILGMGCTKFGE-----RWDAGAEDLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIGSG-KSGTPLSRALRLP-NI 79 (398)
T ss_pred CCeEEEEeccccccc-----cCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccc-chhHHHHHHcCCC-CC
Confidence 679999999999997 3678999999999999999999999999999999875432111 1234577789997 58
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCC-CC-CChhhhhhhhhhcccccHHHHHHHHHHHh
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWE-GS-VNPKVKAFEQAQNCLLPMGVTSENVAHRF 207 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~-~~-~~~~~~~~~~~~~~~~~~g~~a~~~~~~~ 207 (462)
|.++|+.+|+||+.+|.+|++.|++|++|++||+|+|+||+.++... .. ....+..+.........|++.+++|+++|
T Consensus 80 ~~~~v~~~c~sg~~ai~~A~~~I~sG~~d~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~~~~~y 159 (398)
T PRK06157 80 PVTRVENFCATGSEAFRGAVYAVASGAYDIALALGVEKLKDTGYGGLPVANPGTLADMTMPNVTAPGNFAQLASAYAAKY 159 (398)
T ss_pred CEEEEecccHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCccccccccccccchhcccccCchHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999987654211 10 01112111111111235889999999999
Q ss_pred CCCHHHH----HHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCC
Q 012506 208 GVTRKEQ----DQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKD 283 (462)
Q Consensus 208 gisre~~----~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~ 283 (462)
|+++|++ +++++++|+||.+ ||++++ |.++|+|+|++++|+++|
T Consensus 160 G~t~e~~~~~~a~vav~~~~~A~~-------------------np~A~~------------r~~~t~e~v~~s~~v~~P- 207 (398)
T PRK06157 160 GVSREDLKRAMAHVSVKSHANGAR-------------------NPKAHL------------RKAVTEEQVLKAPMIAGP- 207 (398)
T ss_pred CCCHHHHcccccHHHHHHHHHHhc-------------------CChhhc------------CCCCCHHHHhcCCcccCC-
Confidence 9999999 7999999999987 666543 445899999999999998
Q ss_pred CCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEecc----------CCCCCCccHHHHHHHHHHHcCCC--
Q 012506 284 GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV----------DPAIMGVGPAVAIPAAVKSAGLQ-- 351 (462)
Q Consensus 284 g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~----------~p~~~~~~~~~Ai~~aL~~AGl~-- 351 (462)
++.+|||+++|||+|+||++++.|++++.++.++|++++.... +|..+. .+..+++++|+++||+
T Consensus 208 --l~~~d~~~~~DGAaA~vl~s~~~A~~l~~~~~v~I~g~~~~~~~~~~~~~~~~~~~~~~-~~~~aa~~a~~~AGl~~~ 284 (398)
T PRK06157 208 --LGLFDCCGVSDGAAAAIVTTPEIARALGKKDPVYVKALQLAVSNGWELQYNGWDGSYFP-TTRIAARKAYREAGITDP 284 (398)
T ss_pred --CchhccCCCCCccEEEEEecHHHHHhhCCCCCeEEEEEEEecccccccccccccccccH-HHHHHHHHHHHHcCCCCc
Confidence 8999999999999999999999999999855669999877532 222232 2457999999999998
Q ss_pred CCCccEEEecCCCHHHHHHHHHHcCCCCC------------------CCCCCCCccccCCccchHHHHHHHHHHHHHHhc
Q 012506 352 LDDIDLFEINEAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGARCVATLLHEMKRR 413 (462)
Q Consensus 352 ~~DID~~eihdafa~~~~~~~e~LGl~~~------------------~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~ 413 (462)
++|||++|+||+|++++++++|.||||++ |+|++||.+++|||+||||+++++|+++||+++
T Consensus 285 ~~Did~~Ei~D~Fs~~~l~~~e~lGl~~~Ge~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg~ 364 (398)
T PRK06157 285 REELSMAEVHDCFSITELVTMEDLGLSERGQAWRDVLDGFFDADGGLPCQIDGGLKCFGHPIGASGLRMLYEMYLQLLGR 364 (398)
T ss_pred hhcCCEEEEecCChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCCCCcccCCCcccHhHHHHHHHHHHHhccc
Confidence 79999999999999999999999999984 899999999999999999999999999999998
Q ss_pred CC-----CCcEEEEEeecc
Q 012506 414 GR-----DCRFGVISMCIG 427 (462)
Q Consensus 414 ~~-----~~~~gl~~~~~G 427 (462)
++ +++++|++...|
T Consensus 365 ag~rQv~~a~~~l~~~~gg 383 (398)
T PRK06157 365 AGERQLKNPRLALTHNLGG 383 (398)
T ss_pred ccCccCCCccEEEEeccCC
Confidence 54 579999986443
|
|
| >PRK06059 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-59 Score=486.42 Aligned_cols=349 Identities=20% Similarity=0.246 Sum_probs=290.9
Q ss_pred CCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCC
Q 012506 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (462)
Q Consensus 49 ~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~ 128 (462)
+++|+|||+++|||+|. +.++.+|+.+|+++||+++||++++||.+++++..+.....+..++.++..+|++ .
T Consensus 3 ~~~v~Ivg~~~t~~~r~------~~~~~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~-~ 75 (399)
T PRK06059 3 PEPVYILGAGMHPWGKW------GRDFVEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWN-G 75 (399)
T ss_pred CCcEEEEEecccccCCC------CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCC-C
Confidence 36799999999999872 4577999999999999999999999999999887655432344568899999994 6
Q ss_pred cceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCC-CC-C-CChhhhhh-hhhhcccccHHHHHHHHH
Q 012506 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAW-EG-S-VNPKVKAF-EQAQNCLLPMGVTSENVA 204 (462)
Q Consensus 129 ~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~-~~-~-~~~~~~~~-~~~~~~~~~~g~~a~~~~ 204 (462)
.|+++++.+|+|++.+|.+|+++|++|++|++||+|+|+|+...... .. . .++.|... +........|++.+++|+
T Consensus 76 ~~~~~v~~~Casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~~~ 155 (399)
T PRK06059 76 APVSSSYAACASGSQALQSARAQILAGLCDVALVVGADTTPKGFFAPVGGERPDDPDWLRFHLIGATNPVYFALLARRRM 155 (399)
T ss_pred CceecccchhHHHHHHHHHHHHHHHCCCCCEEEEEEEcccCCCCCcccccccccccchhhcccCCCccHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999998532111 11 1 11222211 011111246899999999
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCC
Q 012506 205 HRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDG 284 (462)
Q Consensus 205 ~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g 284 (462)
++||+++|+++.+++++|++|.. ||+++ +|+++|+|++++++|+++|
T Consensus 156 ~~yg~s~e~~a~v~~~~~~~a~~-------------------Np~A~------------~r~~~t~e~v~~s~~i~~P-- 202 (399)
T PRK06059 156 DLYGATVEDFAQVKVKNARHGLL-------------------NPNAR------------YRKEVTVEDVLASPVVSDP-- 202 (399)
T ss_pred HHhCCCHHHHHHHHHHHHHHHcc-------------------CcHhh------------cCCCCCHHHHhcCCcccCC--
Confidence 99999999999999999999865 67665 4456899999999999998
Q ss_pred CcccCCCCCcCCcceEEEEeCHHHHHhc--CCCceEEEEEEEEec-cCC----CCCCcc--------------HHHHHHH
Q 012506 285 TTTAGNSSQVSDGAGAVLLMKRSVAMRK--GLPILGVFRTFAAVG-VDP----AIMGVG--------------PAVAIPA 343 (462)
Q Consensus 285 ~~t~~~~s~~sDGAaAvvL~s~e~A~~~--g~~~~~~i~g~~~~~-~~p----~~~~~~--------------~~~Ai~~ 343 (462)
+|.+|||+++|||+|+||++++.|+++ +.++.++|.+++... ..+ +....+ ...++++
T Consensus 203 -l~~~d~~~~~DGAaA~vl~s~~~A~~l~~~~~~~v~I~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~~ 281 (399)
T PRK06059 203 -LRLLDICATSDGAAALIVASKSFARRHLGSVAGVPSVRAISTVTPRYPQHLPELPDIATDSTAAVPAPERVFKDQILDA 281 (399)
T ss_pred -CchhhcCCCCCceEEEEEecHHHHHhhccccCCceEEEEEEEecccccccccccccccccccccccccccHHHHHHHHH
Confidence 899999999999999999999999999 666777999988764 221 111121 1357999
Q ss_pred HHHHcCCCCCCccEEEecCCCHHHHHHHHHHcCCCCC------------------CCCCCCCccccCCccchHHHHHHHH
Q 012506 344 AVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGARCVAT 405 (462)
Q Consensus 344 aL~~AGl~~~DID~~eihdafa~~~~~~~e~LGl~~~------------------~vn~~GG~~a~Ghp~gatG~~~~~~ 405 (462)
+|+++||+++|||++|+||+|+++++.++|+||||++ |||++||++++|||+||||+++++|
T Consensus 282 a~~~agl~~~Did~~El~d~f~~~~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e 361 (399)
T PRK06059 282 AYAEAGIGPEDLSLAEVYDLSTALELDWYEHLGLCPKGEAEALLRSGATTLGGRIPVNPSGGLACFGEAIPAQAIAQVCE 361 (399)
T ss_pred HHHHcCCCHHHCcEEeecccChHHHHHHHHHcCCCCCCcHHHHHHCCCccCCCCeeecCCCccccCCccCCccHHHHHHH
Confidence 9999999999999999999999999999999999975 9999999999999999999999999
Q ss_pred HHHHHHhcCC-----CCcEEEEEeecccceeEEEEEEe
Q 012506 406 LLHEMKRRGR-----DCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 406 ~~~qL~~~~~-----~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
+++||+++.+ ++++||+++|+++|++.++||++
T Consensus 362 ~~~qLrg~ag~~Qv~~a~~gl~~~~g~~g~~~~~~l~~ 399 (399)
T PRK06059 362 LTWQLRGQAGGRQVEGARVGITANQGLFGHGSSVIVAR 399 (399)
T ss_pred HHHHhccCcCCccCCCccEEEEeccCCcccceEEEecC
Confidence 9999999753 56899999998889999999985
|
|
| >PRK06365 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-59 Score=482.67 Aligned_cols=350 Identities=20% Similarity=0.209 Sum_probs=283.9
Q ss_pred CCCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHH-HHHHcCCC
Q 012506 48 YGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRM-AAFYAGFP 126 (462)
Q Consensus 48 ~~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~-~a~~~Glp 126 (462)
.+++|+|||+++|||+|. +.+.+..||+.+|+++||+|+||++++||.++++++..... +++.++. ++..+|++
T Consensus 14 ~m~~VaIvG~g~Tpfgr~----~~~~~~~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~-g~~~~~~~~~~~lGl~ 88 (430)
T PRK06365 14 KSRDVYMVAAGVTKFDKA----SPYMDFRERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQ-RQLLAGIMVQDYLGLV 88 (430)
T ss_pred hccCEEEEEeeecCcccc----CCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEeccccccc-ccchhhHHHHHhcCCC
Confidence 347899999999999983 35678899999999999999999999999999887654443 4555555 47899996
Q ss_pred CCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCC-----CChhhhhhhhhhcccccHHHHHH
Q 012506 127 ETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGS-----VNPKVKAFEQAQNCLLPMGVTSE 201 (462)
Q Consensus 127 ~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~-----~~~~~~~~~~~~~~~~~~g~~a~ 201 (462)
..|+++|+++|+||..||..|++.|++|.+|+|||+|+|+||..++..... .++.|..+... .....|++.++
T Consensus 89 -~~~~~~v~~~~aSg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~d~~~~~~~g~-~~~~~~al~a~ 166 (430)
T PRK06365 89 -PKPSKRIEGGGATGGLAFQAGYEEIASGRMDCVAVYGFETMSHVNTWKGNEFIALASDTNFDYPLGG-FYTGYYAMMAV 166 (430)
T ss_pred -CCceEEEeCCcHHHHHHHHHHHHHHHcCCCCEEEEEEeeecccccchhhhhhhcccccccccccccC-ccHHHHHHHHH
Confidence 489999999999999999999999999999999999999999865322111 11122221111 11134899999
Q ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCccc
Q 012506 202 NVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFK 281 (462)
Q Consensus 202 ~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~ 281 (462)
+|+++||+++|+|+++++++|+||.+ ||++++++ ++|+|++++++++++
T Consensus 167 ry~~~yG~t~e~la~vav~~~~~A~~-------------------NP~A~~~~------------~~t~e~v~~s~~i~~ 215 (430)
T PRK06365 167 RHMYEFGTTVEQLAKVSVKNHGNAIH-------------------NPFAQSPM------------KITVEDVRKSPMVSY 215 (430)
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHhh-------------------CcHhhcCC------------CCCHHHHhcCCcccc
Confidence 99999999999999999999999997 78776543 479999999999988
Q ss_pred CCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEE--eccCCCCCCc------------------------
Q 012506 282 KDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAA--VGVDPAIMGV------------------------ 335 (462)
Q Consensus 282 p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~--~~~~p~~~~~------------------------ 335 (462)
| +|.+|||+++|||+|+||++++.|++++.+|+ +|.+.+. .+.++..+..
T Consensus 216 P---lt~~d~~~~sDGAaAvvl~See~A~~l~~~pv-~i~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (430)
T PRK06365 216 P---LTRLDVCAMSDGAACAILASEDKAFEITDKPV-LIKAIGTGSDTLRLADRPFGEVPLLPNESPDDYKDLRYPGVHS 291 (430)
T ss_pred C---cchhhcCCcCCceEEEEEecHHHHHhcCCCCe-EEEEEEEeccccccccccccccccccccccccccccccccccc
Confidence 7 99999999999999999999999999998886 4545443 3333322111
Q ss_pred --cHHHHHHHHHHHcCCC--CCCccEEEecCCCHHHHHHHHHHcCCCCC------------------CCCCCCCccccCC
Q 012506 336 --GPAVAIPAAVKSAGLQ--LDDIDLFEINEAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGH 393 (462)
Q Consensus 336 --~~~~Ai~~aL~~AGl~--~~DID~~eihdafa~~~~~~~e~LGl~~~------------------~vn~~GG~~a~Gh 393 (462)
....+++++|+++||+ ++|||++|+||+|++++++++|+||||++ |||++||.+++||
T Consensus 292 ~~~~~~a~~~a~~~AGl~~~~~DiD~~Ei~D~Fa~~~l~~lE~lGl~~~Ge~~~~~~~G~~~~~G~~piNt~GG~la~Gh 371 (430)
T PRK06365 292 FRAGRMAAKEAYEMAGITDPLNDLDLIELHDAYTSSEIQTYEDLGLCKYGEGGQFIESGKPELPGKLPVNPSGGLLAAGH 371 (430)
T ss_pred cHHHHHHHHHHHHHcCCCCCHHHCCEEEeecCCcHHHHHHHHHcCCCCCCchHHHHHCCCcCCCCCccccCCCchhcCCC
Confidence 1246999999999998 89999999999999999999999999984 9999999999999
Q ss_pred ccchHHHHHHHHHHHHHHhcCC-----------CCcEEEEEeecccc-eeEEEEEEec
Q 012506 394 PLGTTGARCVATLLHEMKRRGR-----------DCRFGVISMCIGTG-MGAAAVFERG 439 (462)
Q Consensus 394 p~gatG~~~~~~~~~qL~~~~~-----------~~~~gl~~~~~G~G-~g~A~v~~~~ 439 (462)
|+||||+++++|+++||+++++ +++++|++...|.| ...+.||+++
T Consensus 372 p~GatG~~~~~e~~~QLrG~a~~~~~~~~rQv~~a~~~l~~~~gg~~~~~~~~vl~~~ 429 (430)
T PRK06365 372 AVGATGIMQAVFMFWQLQGRIKKHFHDDYLQVKNAKRGLIHSHAGTGTYVTVTILEAP 429 (430)
T ss_pred cccHHHHHHHHHHHHHHhcccCCCCCcccccCCCccEEEEecCCcccceEEEEEEecC
Confidence 9999999999999999998752 46899998644443 2234566543
|
|
| >PRK12578 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-58 Score=475.49 Aligned_cols=347 Identities=18% Similarity=0.258 Sum_probs=285.7
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
++|+|||++.|||+| .++.++.+|+.+|+++||+++||++++||.+++|+..+... ..++++.++..+|++ ..
T Consensus 1 ~~v~IvG~g~t~~~~-----~~~~~~~eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~-~~~~a~~v~~~lGl~-~~ 73 (385)
T PRK12578 1 RRVAVIGVGNSKFGR-----RDDVSVQELAWESIKEALNDAGVSQTDIELVVVGSTAYRGI-ELYPAPIVAEYSGLT-GK 73 (385)
T ss_pred CceEEEeecccceee-----cCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccc-cCChHHHHHHHhCCC-CC
Confidence 469999999999998 36889999999999999999999999999999998765432 356688899999996 46
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCC-----CChhhhhhhhhhcccccHHHHHHHHH
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGS-----VNPKVKAFEQAQNCLLPMGVTSENVA 204 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~-----~~~~~~~~~~~~~~~~~~g~~a~~~~ 204 (462)
+.++|+++|+|++.+|..|+++|++|.+|+|||+|+|+||+.+...... ....+...+........+++.+++|+
T Consensus 74 ~~~~v~~~casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~a~~a~~~m 153 (385)
T PRK12578 74 VPLRVEAMCATGLAASLTAYTAVASGLVDMAIAVGVDKMTEVDTSTSLAIGGRGGNYQWEYHFYGTTFPTYYALYATRHM 153 (385)
T ss_pred CeeEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcccchhhhcccccccccccccCCCChHHHHHHHHHHHH
Confidence 7799999999999999999999999999999999999999765321100 01111110111111124678899999
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCC
Q 012506 205 HRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDG 284 (462)
Q Consensus 205 ~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g 284 (462)
++||+++|+++++++++|++|.+ ||+++++ .++|+|+++++|++++|
T Consensus 154 ~~~g~t~e~~a~va~~~~~~A~~-------------------np~a~~~------------~~i~~e~v~~s~~i~~P-- 200 (385)
T PRK12578 154 AVYGTTEEQMALVSVKAHKYGAM-------------------NPKAHFQ------------KPVTVEEVLKSRAISWP-- 200 (385)
T ss_pred HHhCcCHHHHHHHHHHHHHHHhc-------------------CChhhcC------------CCCCHHHHhcCCccCCC--
Confidence 99999999999999999999997 5555433 33688999999999888
Q ss_pred CcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEec------cCCCCCCc-cHHHHHHHHHHHcCCCCCCccE
Q 012506 285 TTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG------VDPAIMGV-GPAVAIPAAVKSAGLQLDDIDL 357 (462)
Q Consensus 285 ~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~------~~p~~~~~-~~~~Ai~~aL~~AGl~~~DID~ 357 (462)
+|.+|||+++|||+|+||++++.|++++.++.++|+|++... .+|+.+.. ++..+++++|+++||+++|||+
T Consensus 201 -l~~~d~~~~~DGAaA~vl~s~e~A~~l~~~~~~~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~DiD~ 279 (385)
T PRK12578 201 -IKLLDSCPISDGSATAIFASEEKVKELKIDSPVWITGIGYANDYAYVARRGEWVGFKATQLAARQAYNMAKVTPNDIEV 279 (385)
T ss_pred -ccHhhcCCcCCCeEEEEEecHHHHHhcCCCCCeEEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCE
Confidence 999999999999999999999999999977778999998752 33444443 4567999999999999999999
Q ss_pred EEecCCCHHHHHHHHHHcCCCCC------------------CCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC----
Q 012506 358 FEINEAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR---- 415 (462)
Q Consensus 358 ~eihdafa~~~~~~~e~LGl~~~------------------~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~---- 415 (462)
+|+||+|+++++.++|.||||++ |||++||++++|||+||||+++++|+++||+++++
T Consensus 280 ~ei~d~ft~~~l~~le~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~GhP~gatG~~~v~e~~~qLrg~ag~~qv 359 (385)
T PRK12578 280 ATVHDAFTIAEIMGYEDLGFTEKGKGGKFIEEGQSEKGGKVGVNLFGGLKAKGHPLGATGLSMIYEITKQLRDEAGKLQQ 359 (385)
T ss_pred EEecCcChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeeCCCCCcccCCCCccHHHHHHHHHHHHHHhCCcccCcC
Confidence 99999999999999999999984 89999999999999999999999999999998854
Q ss_pred -C-CcEEEEEeecccce-eEEEEEE
Q 012506 416 -D-CRFGVISMCIGTGM-GAAAVFE 437 (462)
Q Consensus 416 -~-~~~gl~~~~~G~G~-g~A~v~~ 437 (462)
+ ++++|++...|.|. +.+.||+
T Consensus 360 ~~~~~~~l~~~~Gg~~~~~~~~v~~ 384 (385)
T PRK12578 360 PLKKYIGLVHNVGGTGHFAYVMILR 384 (385)
T ss_pred CcchheEEEeccCcchhhEEEEEEe
Confidence 2 36999986443332 2344554
|
|
| >PTZ00455 3-ketoacyl-CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-58 Score=478.47 Aligned_cols=352 Identities=21% Similarity=0.269 Sum_probs=283.1
Q ss_pred CcEEEEEeeeccc-ccC---C-------CCCCCCCCHHHHHHHHHHHHHHHcCCCccc--cCcEEEEeccCCCC-ccccH
Q 012506 50 DDVVIVAAYRTAL-CKS---K-------RGGFKDTYPDDLLAPVLKAVIEKTNVDPSE--VGDIVVGTVLAPGS-QRASE 115 (462)
Q Consensus 50 ~~v~Ivg~~rTp~-~~~---~-------~g~~~d~~~~eL~~~A~~~Al~~agl~~~~--Id~vivG~~~~~~~-~~~~~ 115 (462)
++|+|||++|||| +|. + .|.+++.++.||+.+|+++||+++||++++ ||.+++|++.+... .+.++
T Consensus 12 ~~v~Ivg~~rTpf~gk~~~~~~~~~~~~~G~~~~~s~~eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~~~~ 91 (438)
T PTZ00455 12 KRVFVVGGHITPFVGKGSPLFIDKKHPDFGKKENKTLEELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGHL 91 (438)
T ss_pred CceEEEEeecccccCCCccccccccccccCcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCcCEEEEEeccccccccccch
Confidence 5799999999999 873 1 577789999999999999999999999999 99999999876541 14678
Q ss_pred HHHHHHHcCCC------CCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCC---CChhhhhh
Q 012506 116 CRMAAFYAGFP------ETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGS---VNPKVKAF 186 (462)
Q Consensus 116 a~~~a~~~Glp------~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~---~~~~~~~~ 186 (462)
++.++..+|+| ..+|.++|+++|+||+.||..|+++|++|++|+|||+|+|+||+.+.+.... ....+...
T Consensus 92 a~~~~~~~gl~~~~~gl~~~p~~~V~~~caSG~~Ai~~A~~~I~sG~~dvvlv~G~E~ms~~~~~~~~~~~~~~~~~~~~ 171 (438)
T PTZ00455 92 GPAAVGSLGQSGASNALLYKPAMRVEGACASGGLAVQSAWEALLAGTSDIALVVGVEVQTTVSARVGGDYLARAADYRRQ 171 (438)
T ss_pred HHHHHHhccCcccccccCCCceeEEECcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcchhhhhhccchhhcccc
Confidence 89888888777 6799999999999999999999999999999999999999999876532211 00001000
Q ss_pred -h-hhhcccccHHHHHHHHHHHhC-CCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCC-CCceEE--ec
Q 012506 187 -E-QAQNCLLPMGVTSENVAHRFG-VTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGD-EKPVTI--SV 260 (462)
Q Consensus 187 -~-~~~~~~~~~g~~a~~~~~~~g-isre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~-~~~~~v--~~ 260 (462)
. ........+++. .+|+++|| +|||+|++|++++|+++.. ||.+++ +++.++ ..
T Consensus 172 ~~~~~~~~~~~~a~~-~~ym~~~ggitrE~la~vAvka~~~a~~-------------------nP~A~~~~~~~t~~~~~ 231 (438)
T PTZ00455 172 RKLDDFTFPCLFAKR-MKYIQEHGHFTMEDTARVAAKAYANGNK-------------------NPLAHMHTRKLSLEFCT 231 (438)
T ss_pred ccccCcchHHHHHHH-HHHHHHHCCCCHHHHHHHHHHHHHHHhc-------------------CCHhhccCCCCCceeec
Confidence 0 000000113443 38899996 9999999999999999987 666664 233332 23
Q ss_pred cCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCc----eEEEEEEEEecc----CC--
Q 012506 261 DDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPI----LGVFRTFAAVGV----DP-- 330 (462)
Q Consensus 261 d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~----~~~i~g~~~~~~----~p-- 330 (462)
|+.+| +.| +++++++.+| ++.+|||+++|||+|+||+|++.|++++++| .++|++++..+. +|
T Consensus 232 d~~~~---~~e-~l~s~~i~~p---l~~~d~s~~sDGAaA~vl~See~A~~l~~~p~~~~~v~i~g~~~~~~~~~~~~~~ 304 (438)
T PTZ00455 232 GASDK---NPK-FLGNETYKPF---LRMTDCSQVSDGGAGLVLASEEGLQKMGLSPNDSRLVEIKSLACASGNLYEDPPD 304 (438)
T ss_pred ccccc---chh-hhcCCcccCc---CchhcCCCccccceEEEEecHHHHHhcCCCCCCCccEEEEEEEEecCCcccCccc
Confidence 56666 333 3455666666 8999999999999999999999999999887 689999998865 44
Q ss_pred -CCCCccHHHHHHHHHHHcCCCCCCccEEEecCCCHHHHHHHHHHcCCCC------------------CCCCCCCCcccc
Q 012506 331 -AIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDP------------------EKINVNGGALAI 391 (462)
Q Consensus 331 -~~~~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~~~e~LGl~~------------------~~vn~~GG~~a~ 391 (462)
..++.+ ..+++++|+++||+++|||++|+||+|++++++++|.||||+ .|||++||++++
T Consensus 305 ~~~~~~~-~~A~~~a~~~AGl~~~DiD~~Ei~daFa~~~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~ 383 (438)
T PTZ00455 305 ATRMFTS-RAAAQKALSMAGVKPSDLQVAEVHDCFTIAELLMYEALGIAEYGHAKDLIRNGATALEGRIPVNTGGGLLSF 383 (438)
T ss_pred cccchHH-HHHHHHHHHHcCCCHHHCcEeeecccChHHHHHHHHHcCCCCCCchHHHHhcCCcccCCCceeeCCCchhhc
Confidence 333333 679999999999999999999999999999999999999998 499999999999
Q ss_pred CCccchHHHHHHHHHHHHHHhcCC-----C-CcEEEEEeecccc
Q 012506 392 GHPLGTTGARCVATLLHEMKRRGR-----D-CRFGVISMCIGTG 429 (462)
Q Consensus 392 Ghp~gatG~~~~~~~~~qL~~~~~-----~-~~~gl~~~~~G~G 429 (462)
|||+||||+++++|+++||+++++ + +++|+++...|.|
T Consensus 384 GHP~gAtG~~~v~e~~~QLrg~ag~~Qv~~~~~~gl~~~~Gg~~ 427 (438)
T PTZ00455 384 GHPVGATGVKQIMEVYRQMKGQCGEYQMKNIPALGATLNMGGDD 427 (438)
T ss_pred CCCcchHHHHHHHHHHHHHhhccccCCCCCcccEEEEeccCCCc
Confidence 999999999999999999998764 3 5899998644433
|
|
| >PRK08256 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-58 Score=474.33 Aligned_cols=331 Identities=23% Similarity=0.331 Sum_probs=278.1
Q ss_pred cEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcc
Q 012506 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP 130 (462)
Q Consensus 51 ~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p 130 (462)
+|+|||+++|||+|. + ++.+..+|+.+|+++||+|+|+++++||.+++|+..++.. . ...+...+|+. .+|
T Consensus 2 ~v~IvG~~~t~~~~~--~--~~~~~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~-~---~~~~~~~lGl~-~~~ 72 (391)
T PRK08256 2 KVFVAGVGMTPFEKP--G--ASWDYPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDST-S---GQRALYEVGMT-GIP 72 (391)
T ss_pred cEEEEeccccccccC--C--CCCCHHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcc-h---hHHHHHHcCCC-CCC
Confidence 599999999999862 2 4678999999999999999999999999999998776442 1 22456688994 578
Q ss_pred eEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCC--CCCCCC--hhh---hhhhhh----hcccccHHHH
Q 012506 131 VRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMA--WEGSVN--PKV---KAFEQA----QNCLLPMGVT 199 (462)
Q Consensus 131 ~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~--~~~~~~--~~~---~~~~~~----~~~~~~~g~~ 199 (462)
+++++++|+||+.+|..|+++|++|++|+||++|+|+|+..+.. +..... ..+ .+.+.. ......|++.
T Consensus 73 ~~~v~~~caSg~~ai~~A~~~I~sG~~d~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 152 (391)
T PRK08256 73 IVNVNNNCSTGSTALFLARQAVRSGAADCALALGFEQMQPGALGSVWDDRPSPLERFDKALAELQGFDPAPPALRMFGGA 152 (391)
T ss_pred CcccccccHHHHHHHHHHHHHHHCCCCCEEEEEEEeeccccccccccccccchhhhhhhhhhhhcccccCCccHHHHHHH
Confidence 99999999999999999999999999999999999999865431 111000 001 000011 1112368999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCc
Q 012506 200 SENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPV 279 (462)
Q Consensus 200 a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~ 279 (462)
+++|+++||+++|+++++++++|+||.+ ||++.++ .++|+|++++++|+
T Consensus 153 a~~y~~~~G~t~e~~a~vav~~~~~A~~-------------------np~A~~~------------~~~t~e~~~~s~~i 201 (391)
T PRK08256 153 GREHMEKYGTTAETFAKIGVKARRHAAN-------------------NPYAQFR------------DEYTLEDVLASPMI 201 (391)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHhhhc-------------------CChhhcC------------CCCCHHHHhcCCcc
Confidence 9999999999999999999999999997 6666443 35899999999999
Q ss_pred ccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCc----------cHHHHHHHHHHHcC
Q 012506 280 FKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGV----------GPAVAIPAAVKSAG 349 (462)
Q Consensus 280 f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~----------~~~~Ai~~aL~~AG 349 (462)
++| +|.+|||+++|||+|+||++++.|+++++++.++|.|++.....|..+.. ++..+++++|+++|
T Consensus 202 ~~P---l~~~d~~~~~DGAaA~il~s~~~a~~~~~~~~v~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~ag 278 (391)
T PRK08256 202 WGP---LTRLQCCPPTCGAAAAIVCSEEFARKHGLDRAVEIVAQAMTTDTPSTFDGRSMIDLVGYDMTRAAAQQVYEQAG 278 (391)
T ss_pred cCC---CcHhhcCCCCCCeEEEEEecHHHHHhcCCCCCEEEEEEEEeccccccccccccccccccHHHHHHHHHHHHHcC
Confidence 998 99999999999999999999999999998788899999887766544332 24579999999999
Q ss_pred CCCCCccEEEecCCCHHHHHHHHHHcCCCCC------------------CCCCCCCccccCCccchHHHHHHHHHHHHHH
Q 012506 350 LQLDDIDLFEINEAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGARCVATLLHEMK 411 (462)
Q Consensus 350 l~~~DID~~eihdafa~~~~~~~e~LGl~~~------------------~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~ 411 (462)
|+++|||++|+||+|++++++++|+||||++ |||++||.+++|||+||||+++++|+++||+
T Consensus 279 ~~~~DiD~~ei~d~f~~~~l~~le~lg~~~~Ge~~~~~~~G~~~~~G~~pvN~~GG~ls~Ghp~gasG~~~~~e~~~QL~ 358 (391)
T PRK08256 279 IGPEDIDVVELHDCFSANELLTYEALGLCPEGEAEKFIDDGDNTYGGRWVVNPSGGLLSKGHPLGATGLAQCAELTWQLR 358 (391)
T ss_pred CCHHHCCEEeeccCCcHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeeCCCCccccCCCCccHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999998 9999999999999999999999999999999
Q ss_pred hcCC-----CCcEEEEEe
Q 012506 412 RRGR-----DCRFGVISM 424 (462)
Q Consensus 412 ~~~~-----~~~~gl~~~ 424 (462)
++++ +++++|++.
T Consensus 359 g~ag~~Qv~~~~~~l~~~ 376 (391)
T PRK08256 359 GTAGARQVEGARLALQHN 376 (391)
T ss_pred CCcCCCcCCccceEEEec
Confidence 9865 356777775
|
|
| >cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-58 Score=473.06 Aligned_cols=348 Identities=32% Similarity=0.467 Sum_probs=292.3
Q ss_pred EEeeecccccCCC---CCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHH-HHHHcCCCCCcc
Q 012506 55 VAAYRTALCKSKR---GGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRM-AAFYAGFPETVP 130 (462)
Q Consensus 55 vg~~rTp~~~~~~---g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~-~a~~~Glp~~~p 130 (462)
+|++||||+| +. |.+.+..+.||+.+|+++||++++|++++||.+++|+..+... ++++++. +...+|+ .++|
T Consensus 1 ~g~~~Tpfg~-~~~~~g~~~~~~~~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~-g~~~~~~~~~~~lg~-~~~p 77 (393)
T cd00826 1 AGAAMTAFGK-FGGENGADANDLAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGE-GQNCAQQAAMHAGGL-QEAP 77 (393)
T ss_pred CccccCCCcc-CCCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcc-cCcHHHHHHHHcCCC-CCCc
Confidence 5889999998 44 7778889999999999999999999999999999999987765 5677775 4445666 5789
Q ss_pred eEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCC
Q 012506 131 VRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVT 210 (462)
Q Consensus 131 ~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gis 210 (462)
+++|+++|+||+.++..|+.+|++|++|++|++|+|+||..+.... ..+.. ..+..+|+ +
T Consensus 78 ~~~V~~~Casg~~al~~A~~~I~sG~~~~vlv~g~e~~s~~~~~~~-----------------~~~~~--~~~~~~~~-~ 137 (393)
T cd00826 78 AIGMNNLCGSGLRALALAMQLIAGGDANCILAGGFEKMETSAENNA-----------------KEKHI--DVLINKYG-M 137 (393)
T ss_pred EEEecchhHHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCccccc-----------------ccchh--HHHHHHhC-C
Confidence 9999999999999999999999999999999999999987542100 00000 12456788 8
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCccccccceecc--------cCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC
Q 012506 211 RKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKI--------VDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK 282 (462)
Q Consensus 211 re~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~--------~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p 282 (462)
|++++.++..++.++..+++.|.++++|+||.++- +||++++ |.++|+|++++++|+|.+
T Consensus 138 r~~~~~~a~~s~~~~~~~~~~G~~~e~~a~v~~~~~~~~~~a~~np~a~~------------~~~~t~e~~~~~~~i~~~ 205 (393)
T cd00826 138 RACPDAFALAGQAGAEAAEKDGRFKDEFAKFGVKGRKGDIHSDADEYIQF------------GDEASLDEIAKLRPAFDK 205 (393)
T ss_pred hhhccHHHHHHHHHHHHHHHcCCCHHHEEEEEEecCCCCEEEecCCCCCC------------CCCCCHHHHhcCCCccCC
Confidence 99999999999999999999999999999997642 2454433 345899999999999955
Q ss_pred CCCcccCCCCCcCCcceEEEEeCHHHHHhcCC-------CceEEEEEEEEeccCCC----CCCccHHHHHHHHHHHcCCC
Q 012506 283 DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGL-------PILGVFRTFAAVGVDPA----IMGVGPAVAIPAAVKSAGLQ 351 (462)
Q Consensus 283 ~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~-------~~~~~i~g~~~~~~~p~----~~~~~~~~Ai~~aL~~AGl~ 351 (462)
++++|.+|||+++|||+|+||+|+++|+++++ .+++++.++.....+|+ .+..++..+++++|+++||+
T Consensus 206 ~~pl~~~~~~~~~DGAAA~vl~S~~~a~~l~l~~~~v~i~~~a~~~~~~~~~~~~~~~~~~~~~~~~~A~~~al~~Agi~ 285 (393)
T cd00826 206 EDFLTAGNACGLNDGAAAAILMSEAEAQKHGLQSKAREIQALEMITDMASTFEDKKVIKMVGGDGPIEAARKALEKAGLG 285 (393)
T ss_pred CCCEechhcCCcCCCeEEEEEecHHHHHHcCCcccccccceEEEEEeeeccccCccccccccceeHHHHHHHHHHHcCCC
Confidence 56699999999999999999999999999986 33444555544455666 56678889999999999999
Q ss_pred CCCccEEEecCCCHHHHHHHHHHcCCCC------------------CCCCCCCCccccCCccchHHHHHHHHHHHHHHhc
Q 012506 352 LDDIDLFEINEAFASQFVYCRNKLGLDP------------------EKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 413 (462)
Q Consensus 352 ~~DID~~eihdafa~~~~~~~e~LGl~~------------------~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~ 413 (462)
++|||++|+||+|++++++++|.||||+ .|||++||.+++|||+||||+++++|+++||+++
T Consensus 286 ~~DID~~Ei~d~Fa~~~l~~~e~lgl~~~g~~~~~~~~g~~~~~G~~pvN~~GG~la~GhP~gAtG~~~~~e~~~qL~g~ 365 (393)
T cd00826 286 IGDLDLIEAHDAFAANACATNEALGLCPEGQGGALVDRGDNTYGGKSIINPNGGAIAIGHPIGASGAAICAELCFELKGE 365 (393)
T ss_pred HHHcCeeehhhhhHHHHHHHHHHhCCCcccchhhhhhcCccccCCcceECCCCchhhcCCCccccHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999998 5999999999999999999999999999999998
Q ss_pred CCC---CcEEEEEeecccceeEEEEEE
Q 012506 414 GRD---CRFGVISMCIGTGMGAAAVFE 437 (462)
Q Consensus 414 ~~~---~~~gl~~~~~G~G~g~A~v~~ 437 (462)
+++ .++++...|++||+|.++|+|
T Consensus 366 ag~~q~~~~~~~~~~~~Gg~g~a~~~~ 392 (393)
T cd00826 366 AGKRQGAGAGLALLCIGGGGGAAMCIE 392 (393)
T ss_pred hccccCCCcCEEEEEcCCCceeEEEEe
Confidence 541 245566667888889999887
|
There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >PRK06289 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-58 Score=474.74 Aligned_cols=353 Identities=20% Similarity=0.258 Sum_probs=280.4
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccc--cHHHHHHHHcCCCC
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRA--SECRMAAFYAGFPE 127 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~--~~a~~~a~~~Glp~ 127 (462)
++|+|||+++|||+| ++.+++.++.||+.+|+++||+++||++++||.+++|+..++...+. ..........++ .
T Consensus 3 ~~v~Ivg~~~t~~~r--~~~~~~~s~~eLa~eA~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~~~~~~-~ 79 (403)
T PRK06289 3 DDVWVLGGYQSDFAR--NWTKEGRDFADLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPATVHPAL-W 79 (403)
T ss_pred CcEEEEeCCcCcccc--ccCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccccchHHHHHhhcC-C
Confidence 579999999999987 34557899999999999999999999999999999998755421111 111112233455 2
Q ss_pred CcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCC-CC-Chhhhhhh---hhhcccccHHHHHHH
Q 012506 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEG-SV-NPKVKAFE---QAQNCLLPMGVTSEN 202 (462)
Q Consensus 128 ~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~-~~-~~~~~~~~---~~~~~~~~~g~~a~~ 202 (462)
..|+++++++|+||+.+|..|+.+|++|++|+|||+|+|+||..+..... .+ ...+.+.. .+......|++.+++
T Consensus 80 g~~~~~v~~~Casg~~al~~Aa~~I~sG~~~~VLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~ 159 (403)
T PRK06289 80 GVPASRHEAACASGSVATLAAMADLRAGRYDVALVVGVELMKTVPGDVAAEHLGAAAWTGHEGQDARFPWPSMFARVADE 159 (403)
T ss_pred CCceeecccccHHHHHHHHHHHHHHHcCCCCEEEEEEEEecCCCCchhhHHhhhcccccccccccCCCccHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999875532111 01 01111110 001112348999999
Q ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC
Q 012506 203 VAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK 282 (462)
Q Consensus 203 ~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p 282 (462)
|+++||++||+|+++++++|++|.+ ||++++++.++. .++|.||+..++++.+|
T Consensus 160 y~~~yG~t~e~la~va~~~~~~A~~-------------------NP~A~~~~~~~~-------~~~~~~d~~~s~~i~~P 213 (403)
T PRK06289 160 YDRRYGLDEEHLRAIAEINFANARR-------------------NPNAQTRGWAFP-------DEATNDDDATNPVVEGR 213 (403)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHcc-------------------CcHhhcCccccc-------cccchhhhhcCCcccCC
Confidence 9999999999999999999999987 677766544221 24788889888887666
Q ss_pred CCCcccCCCCCcCCcceEEEEeCHHHHHhcCC-CceEEEEEEEEeccC-------------CCCCCccHHHHHHHHHHHc
Q 012506 283 DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGL-PILGVFRTFAAVGVD-------------PAIMGVGPAVAIPAAVKSA 348 (462)
Q Consensus 283 ~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~-~~~~~i~g~~~~~~~-------------p~~~~~~~~~Ai~~aL~~A 348 (462)
+|.+|||+++|||+|+||+++|.|++++. ++.++|+|++..... |..+ ..+..|++++|+++
T Consensus 214 ---l~~~d~~~~~DGAaA~vl~s~e~a~~l~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~aa~~a~~~A 289 (403)
T PRK06289 214 ---LRRQDCSQVTDGGAGVVLASDAYLRDYADARPIPRIKGWGHRTAPLGLEQKLDRSAGDPYVL-PHVRQAVLDAYRRA 289 (403)
T ss_pred ---CchhhcCCCCCceeEEEEEcHHHHHHhccCCCCEEEEEEEEecccccccccccccccccccc-HHHHHHHHHHHHHc
Confidence 99999999999999999999999999987 677899999876321 2222 22567999999999
Q ss_pred CCCCCCccEEEecCCCHHHHHHHHHHcCCCCC------------------CCCCCCCccccCCccchHHHHHHHHHHHHH
Q 012506 349 GLQLDDIDLFEINEAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGARCVATLLHEM 410 (462)
Q Consensus 349 Gl~~~DID~~eihdafa~~~~~~~e~LGl~~~------------------~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL 410 (462)
||+++|||++|+||+|++++++++|+||||++ |||++||.+++|||+|+||+++++|+++||
T Consensus 290 gi~~~Didv~el~D~fa~~~l~~le~lGl~~~Ge~~~~v~~G~~~~~G~lpvN~~GG~la~Ghp~gatG~~~~~e~~~QL 369 (403)
T PRK06289 290 GVGLDDLDGFEVHDCFTPSEYLAIDHIGLTGPGESWKAIENGEIAIGGRLPINPSGGLIGGGHPVGASGVRMLLDAAKQV 369 (403)
T ss_pred CCCHHHCeEEeeeccchHHHHHHHHHcCCCCCCcHHHHHhcCCcccCCCeeEcCCCCccccCCCccchHHHHHHHHHHHH
Confidence 99999999999999999999999999999985 899999999999999999999999999999
Q ss_pred HhcCC-----CCcEEEEEeecccceeEEEEE
Q 012506 411 KRRGR-----DCRFGVISMCIGTGMGAAAVF 436 (462)
Q Consensus 411 ~~~~~-----~~~~gl~~~~~G~G~g~A~v~ 436 (462)
+++++ +++.++++ |+||+++.++++
T Consensus 370 rg~ag~~Qv~~~~~~l~~-~~gg~~~~~~~~ 399 (403)
T PRK06289 370 TGTAGDYQVEGAKTFGTL-NIGGSTTTTVSF 399 (403)
T ss_pred hccccCccCCchheEEEE-ecCcccceEEEE
Confidence 99864 34566665 678777776543
|
|
| >PRK08313 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-57 Score=462.81 Aligned_cols=349 Identities=18% Similarity=0.177 Sum_probs=288.5
Q ss_pred CCcEEEEEeeeccc-ccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCcc-ccHHHHHHHHcCCC
Q 012506 49 GDDVVIVAAYRTAL-CKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQR-ASECRMAAFYAGFP 126 (462)
Q Consensus 49 ~~~v~Ivg~~rTp~-~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~-~~~a~~~a~~~Glp 126 (462)
+++|+|||+++||| .|. .+.++.+|+.+|+++||+|+||++++||.+++++. ++...+ ..++..++..+|+
T Consensus 2 ~~~v~IvG~g~t~~~~~~-----~~~s~~eL~~eAa~~Al~dAgl~~~dID~iv~~~~-~~~~~~~~~~~~~va~~LGl- 74 (386)
T PRK08313 2 KRLAAVLGTGQTKYVAKR-----QDVSMAGLVREAIDRALADAGLTWDDIDAVVVGKA-PDFFEGVMMPELFLADALGA- 74 (386)
T ss_pred CCcEEEEEeecCCcCccC-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecc-ccccccccCchHHHHHhcCC-
Confidence 47899999999999 652 57789999999999999999999999999999873 322111 2445678899999
Q ss_pred CCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHH
Q 012506 127 ETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHR 206 (462)
Q Consensus 127 ~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~ 206 (462)
...++++++.+|+||..++..|+++|++|.+|+|||+|+|+++.....+....++.|..+... .....|++.+++|+++
T Consensus 75 ~~~~~~~v~~~casg~~al~~A~~~I~sG~~~~vLVvg~e~~s~~~~~~~~~~~~~~~~~~g~-~~~~~~al~a~~ym~~ 153 (386)
T PRK08313 75 TGKPLIRVHTAGSVGGSTAVVAASLVQSGVYRRVLAVAWEKQSESNAMWALSIPVPFTKPVGA-GAGGYFAPHVRAYIRR 153 (386)
T ss_pred CCCceEEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEccCCcccccccccccccccccc-chHHHHHHHHHHHHHH
Confidence 467999999999999999999999999999999999999999764222222222223322221 1224588999999999
Q ss_pred hCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCc
Q 012506 207 FGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTT 286 (462)
Q Consensus 207 ~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~ 286 (462)
||.++|+++++++++|++|.+ ||+++++++ ++|+|++++++|+++| +
T Consensus 154 ~G~~~e~la~vav~~~~~A~~-------------------NP~A~~r~~-----------~~t~e~v~~s~~ia~P---l 200 (386)
T PRK08313 154 SGAPEHIGAMVAVKDRLNGAK-------------------NPYAHLHQP-----------DITLEKVMASQMLWDP---I 200 (386)
T ss_pred HCcCHHHHHHHHHHHHHHHcc-------------------CcHHhcCCC-----------CCCHHHHhcCCcccCC---C
Confidence 999999999999999999987 888876532 3799999999999998 9
Q ss_pred ccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCC-------CCCccHHHHHHHHHHHcCCC--CCCccE
Q 012506 287 TAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPA-------IMGVGPAVAIPAAVKSAGLQ--LDDIDL 357 (462)
Q Consensus 287 t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~-------~~~~~~~~Ai~~aL~~AGl~--~~DID~ 357 (462)
|.+|||+++|||+|+||+++++|++++.++.++|.|++... ++. ....++..+++++|+++||+ ++|||+
T Consensus 201 ~~~d~~~~~DGAaAvvl~s~e~a~~l~~~~~~~I~g~~~~~-~~~~~~~~~~~~~~~~~~a~~~a~~~Agi~~p~~Did~ 279 (386)
T PRK08313 201 RFDETCPSSDGACAVVIGDEEAADAAAGRPVAWIHGTAMRT-EPLAFAGRDQVNPQAGRDAAAALWKAAGITDPRDEIDV 279 (386)
T ss_pred chhccCCCCCceEEEEEecHHHHHhcCCCCCeEEEEEEEEe-cCcccccccccccHHHHHHHHHHHHHcCCCCChhhCCE
Confidence 99999999999999999999999999888888999998763 332 22345568999999999998 799999
Q ss_pred EEecCCCHHHHHHHHHHcCCCCC------------------CCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC----
Q 012506 358 FEINEAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR---- 415 (462)
Q Consensus 358 ~eihdafa~~~~~~~e~LGl~~~------------------~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~---- 415 (462)
+|+||||++++++++|.||||++ |||++||+++ |||.|+||+++++|+++||+++++
T Consensus 280 ~el~d~F~~~~~~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~l~-g~p~gatG~~~~~e~~~qlrG~ag~rQv 358 (386)
T PRK08313 280 AEIYVPFSWFEPMWLENLGFAPEGEGWKLTEAGETAIGGRLPVNPSGGVLS-SNPIGASGMIRFAEAALQVMGKAGEHQV 358 (386)
T ss_pred EEeccCChHHHHHHHHHcCCCCCCchHHHHHCCCcCCCCCccccCCCcccc-cCCCcHHHHHHHHHHHHHhcccccCCcC
Confidence 99999999999999999999987 9999999999 999999999999999999999754
Q ss_pred -CCcEEEEEeecccc-eeEEEEEEecc
Q 012506 416 -DCRFGVISMCIGTG-MGAAAVFERGD 440 (462)
Q Consensus 416 -~~~~gl~~~~~G~G-~g~A~v~~~~~ 440 (462)
+++++|++.+.|++ ....+||++++
T Consensus 359 ~~a~~~l~~~~Gg~~~~~~~~v~~~~~ 385 (386)
T PRK08313 359 DGARKALGHAYGGGSQFFSMWVVGSEK 385 (386)
T ss_pred CCccEEEEeccCCcceEEEEEEEecCC
Confidence 57899999754433 22344666553
|
|
| >PRK07516 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-57 Score=466.81 Aligned_cols=347 Identities=24% Similarity=0.266 Sum_probs=277.7
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCC-ccccHHHHHHHHcCCCCC
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS-QRASECRMAAFYAGFPET 128 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~-~~~~~a~~~a~~~Glp~~ 128 (462)
++|+|||+++|||+| +.+.++.+|+.+|+++||+++|+++++||.+++|+..+... +....+..+...+|+ ..
T Consensus 2 ~~v~Ivg~g~tpfgr-----~~~~~~~eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl-~~ 75 (389)
T PRK07516 2 MTASIVGWAHTPFGK-----LDAETLESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPAL-RF 75 (389)
T ss_pred CcEEEEeCCcceeee-----cCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCC-CC
Confidence 579999999999998 47889999999999999999999999999999998754432 112222334456677 47
Q ss_pred cceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCC-CCCh-hhhhh-hh-hhcccccHHHHHHHHH
Q 012506 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEG-SVNP-KVKAF-EQ-AQNCLLPMGVTSENVA 204 (462)
Q Consensus 129 ~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~-~~~~-~~~~~-~~-~~~~~~~~g~~a~~~~ 204 (462)
.|.++|+++|+||+.||..|+++|++|++|++|++|+|+||..+..... .... .+... .. .......|++.+++|+
T Consensus 76 ~p~~~v~~~CaSg~~Al~~A~~~I~sG~~d~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~y~ 155 (389)
T PRK07516 76 KPATRVENACATGSAAVYAALDAIEAGRARIVLVVGAEKMTATPTAEVGDILLGASYLKEEGDTPGGFAGVFGRIAQAYF 155 (389)
T ss_pred CceeeeccccHHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCcchhhHHHhhhccccccccccCCCcHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999876542211 0000 11000 00 0111135999999999
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHH----HhcCCCcc
Q 012506 205 HRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSE----LAKLKPVF 280 (462)
Q Consensus 205 ~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~----l~~~~p~f 280 (462)
++||+++|+++++++++|+||.+ ||+++++++ +|+|+ +.+++++.
T Consensus 156 ~~yg~~~e~~a~vav~~~~~A~~-------------------nP~A~~~~~------------~t~~~~~~~~~~~~~i~ 204 (389)
T PRK07516 156 QRYGDQSDALAMIAAKNHANGVA-------------------NPYAQMRKD------------LGFEFCRTVSEKNPLVA 204 (389)
T ss_pred HHHCCCHHHHHHHHHHHHHhhhc-------------------CChhhcCCc------------ccHHhhhhhhhcCCccc
Confidence 99999999999999999999987 677765443 45553 55667777
Q ss_pred cCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEecc-------CCCCCCccHHHHHHHHHHHcCCCCC
Q 012506 281 KKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV-------DPAIMGVGPAVAIPAAVKSAGLQLD 353 (462)
Q Consensus 281 ~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~-------~p~~~~~~~~~Ai~~aL~~AGl~~~ 353 (462)
+| +|.+|||+++|||+|+||++++.|++++ + .++|.|++.... +|. ...++..+++++|+++||+++
T Consensus 205 ~p---l~~~d~~~~~DGAaa~il~s~~~a~~~~-~-~v~i~g~~~~~~~~~~~~~~~~-~~~~~~~a~~~a~~~agl~~~ 278 (389)
T PRK07516 205 GP---LRRTDCSLVSDGAAALVLADAETARALQ-R-AVRFRARAHVNDFLPLSRRDPL-AFEGPRRAWQRALAQAGVTLD 278 (389)
T ss_pred CC---CchhhcCCcCcceEEEEEecHHHHHhcC-C-CEEEEEEEeccCcccccCCCcc-ccHHHHHHHHHHHHHcCCCHH
Confidence 76 9999999999999999999999999995 3 458999887632 222 225667899999999999999
Q ss_pred CccEEEecCCCHHHHHHHHHHcCCCCC------------------CCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC
Q 012506 354 DIDLFEINEAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR 415 (462)
Q Consensus 354 DID~~eihdafa~~~~~~~e~LGl~~~------------------~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~ 415 (462)
|||++|+||+|+++++.++|+||||++ |||++||++++|||+||||+++++|+++||+++.+
T Consensus 279 did~~e~~d~f~~~~~~~~e~lg~~~~G~~~~~~~~g~~~~~g~~pvN~sGG~la~Ghp~gasG~~~~~e~~~QL~g~ag 358 (389)
T PRK07516 279 DLSFVETHDCFTIAELIEYEAMGLAPPGQGARAIREGWTAKDGKLPVNPSGGLKAKGHPIGATGVSMHVLAAMQLTGEAG 358 (389)
T ss_pred HCCEEEEecCCCHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCCCCcccCCCCccHHHHHHHHHHHHHhcCCcc
Confidence 999999999999999999999999987 99999999999999999999999999999999854
Q ss_pred -----CCcEEEEEeecccce-eEEEEEEec
Q 012506 416 -----DCRFGVISMCIGTGM-GAAAVFERG 439 (462)
Q Consensus 416 -----~~~~gl~~~~~G~G~-g~A~v~~~~ 439 (462)
+++++|++...|.|. +...||++.
T Consensus 359 ~rQv~~a~~~l~~~~gg~~~~~~~~vl~~~ 388 (389)
T PRK07516 359 GMQIPGAKLAGVFNMGGAAVANYVSILERV 388 (389)
T ss_pred CCcCCchheeeeeccCcccceEEEEEEEec
Confidence 578999987544432 234455543
|
|
| >PRK06064 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-56 Score=463.63 Aligned_cols=347 Identities=23% Similarity=0.323 Sum_probs=289.5
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCc-cccHHHHHHHHcCCCCC
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQ-RASECRMAAFYAGFPET 128 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~-~~~~a~~~a~~~Glp~~ 128 (462)
++|+|||+++|||.+ +.+.++.+|+.+|+++||+++|+++++||.+++|+..++... .+++++.++..+|++ .
T Consensus 2 ~~v~IvG~~~tp~~~-----~~~~~~~eLa~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl~-~ 75 (389)
T PRK06064 2 RDVAIIGVGQTKFGE-----LWDVSLRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGLA-P 75 (389)
T ss_pred CcEEEEEccccccee-----cCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCCC-C
Confidence 579999999999987 467899999999999999999999999999999987654421 356788899999996 6
Q ss_pred cceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCC----CCC-ChhhhhhhhhhcccccHHHHHHHH
Q 012506 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWE----GSV-NPKVKAFEQAQNCLLPMGVTSENV 203 (462)
Q Consensus 129 ~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~----~~~-~~~~~~~~~~~~~~~~~g~~a~~~ 203 (462)
.|.++|+++|+|++.+|..|+++|++|++|++||+|.|+||..+.... ... .+.|..+ ........|++.+++|
T Consensus 76 ~~~~~v~~aCasg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~al~a~~~ 154 (389)
T PRK06064 76 IPATRVEAACASGGAALRQAYLAVASGEADVVLAAGVEKMTDVPTPDATEAIARAGDYEWEEF-FGATFPGLYALIARRY 154 (389)
T ss_pred CCeeEEeCCcHHHHHHHHHHHHHHHCCCCCEEEEEEEEecccCcchhhhhhhhcccccccccc-cCCchHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999987653111 001 1112211 1111123689999999
Q ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCC
Q 012506 204 AHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKD 283 (462)
Q Consensus 204 ~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~ 283 (462)
+++||+++|+++++++++|++|.+ ||+++++ .++|+|++++++++++|
T Consensus 155 ~~~yG~s~e~~a~~a~~~~~~A~~-------------------np~a~~~------------~~~t~~~~~~s~~i~~P- 202 (389)
T PRK06064 155 MHKYGTTEEDLALVAVKNHYNGSK-------------------NPYAQFQ------------KEITVEQVLNSPPVADP- 202 (389)
T ss_pred HHHHCCCHHHHHHHHHHHHHHHhh-------------------CcHhhhC------------CCCCHHHHhcCCcccCC-
Confidence 999999999999999999999987 5665443 34799999999999998
Q ss_pred CCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCC------CC-CCccHHHHHHHHHHHcCCCCCCcc
Q 012506 284 GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDP------AI-MGVGPAVAIPAAVKSAGLQLDDID 356 (462)
Q Consensus 284 g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p------~~-~~~~~~~Ai~~aL~~AGl~~~DID 356 (462)
+|.+|||+++|||+++||++++.|++++.+++ +|.|++.....+ +. ...++..+++++|+++||+++|||
T Consensus 203 --l~~~d~~~~~dGAaa~vL~s~~~A~~~~~~~v-~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~aGi~~~did 279 (389)
T PRK06064 203 --LKLLDCSPITDGAAAVILASEEKAKEYTDTPV-WIKASGQASDTIALHDRKDFTTLDAAVVAAEKAYKMAGIEPKDID 279 (389)
T ss_pred --CchhhcCCCCCcceEEEEecHHHHHHhcCCCe-EEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCC
Confidence 99999999999999999999999999987765 999998865433 22 223456799999999999999999
Q ss_pred EEEecCCCHHHHHHHHHHcCCCCC------------------CCCCCCCccccCCccchHHHHHHHHHHHHHHhcC--C-
Q 012506 357 LFEINEAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGARCVATLLHEMKRRG--R- 415 (462)
Q Consensus 357 ~~eihdafa~~~~~~~e~LGl~~~------------------~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~--~- 415 (462)
++|+||+|++++++++|.||||++ |||++||.+++|||+|+||+++++|+++||++++ +
T Consensus 280 ~~e~~d~ft~~~~~~~e~lgl~~~G~~~~~~~~g~~~~~g~~pvN~~GG~l~~Ghp~~a~G~~~~~e~~~qL~g~a~~g~ 359 (389)
T PRK06064 280 VAEVHDCFTIAEILAYEDLGFAKKGEGGKLAREGQTYIGGDIPVNPSGGLKAKGHPVGATGVSQAVEIVWQLRGEAEKGR 359 (389)
T ss_pred EEEecCCCcHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCCCCcccCCCCcchhHHHHHHHHHHHHhCCCCCCC
Confidence 999999999999999999999874 8999999999999999999999999999999986 4
Q ss_pred ----CCcEEEEEeecccceeE-EEEEEe
Q 012506 416 ----DCRFGVISMCIGTGMGA-AAVFER 438 (462)
Q Consensus 416 ----~~~~gl~~~~~G~G~g~-A~v~~~ 438 (462)
+++++|++...|.+... ++||++
T Consensus 360 rqv~~a~~~l~~~~g~~~~~~~~~vl~~ 387 (389)
T PRK06064 360 QQVIGAGYGLTHNVGGTGHTAVVHILSR 387 (389)
T ss_pred ccCCCccEEEEecCCCccceEEEEEEEe
Confidence 57999999754433333 445543
|
|
| >cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-56 Score=459.46 Aligned_cols=329 Identities=25% Similarity=0.331 Sum_probs=283.0
Q ss_pred EEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEe
Q 012506 55 VAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTV 134 (462)
Q Consensus 55 vg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v 134 (462)
+|++.|||+|. .+.++.+|+.+|+++||+|+|+++++||.+++|+..+... .+++++.++..+|++ ..|.+++
T Consensus 1 vG~g~t~~~~~-----~~~~~~eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~-~~~~a~~va~~lGl~-~~~~~~v 73 (375)
T cd00829 1 VGVGMTPFGRR-----SDRSPLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRF-QSFPGALIAEYLGLL-GKPATRV 73 (375)
T ss_pred CeeeecCcccC-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccccccc-ccchHHHHHHHcCCC-CcceeeE
Confidence 58999999983 4889999999999999999999999999999998876543 467889999999996 7899999
Q ss_pred cCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCC--CCCC-Chhhhh--hhhhhcccccHHHHHHHHHHHhCC
Q 012506 135 NRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAW--EGSV-NPKVKA--FEQAQNCLLPMGVTSENVAHRFGV 209 (462)
Q Consensus 135 ~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~--~~~~-~~~~~~--~~~~~~~~~~~g~~a~~~~~~~gi 209 (462)
+++|+|++.++..|+++|++|.+|++|++|+|+|+..+... .... ...+.. ..........|++.+++|+++||+
T Consensus 74 ~~~c~sg~~al~~Aa~~I~sG~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~~~~~~g~ 153 (375)
T cd00829 74 EAAGASGSAAVRAAAAAIASGLADVVLVVGAEKMSDVPTGDEAGGRASDLEWEGPEPPGGLTPPALYALAARRYMHRYGT 153 (375)
T ss_pred eCccHHHHHHHHHHHHHHHhCCCCEEEEEEEeecccCcccchhhccccchhhhhcccccCCChHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999765311 1111 111110 111111234689999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccC
Q 012506 210 TRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAG 289 (462)
Q Consensus 210 sre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~ 289 (462)
|+|+++.|++++|++|.+ ||++++++ ++|+|++.++||+++| +|.+
T Consensus 154 t~e~~~~va~~~~~~A~~-------------------np~A~~~~------------~~t~d~~~~~~~i~~p---l~~~ 199 (375)
T cd00829 154 TREDLAKVAVKNHRNAAR-------------------NPYAQFRK------------PITVEDVLNSRMIADP---LRLL 199 (375)
T ss_pred CHHHHHHHHHHHHHHHhc-------------------CChhhcCC------------CCCHHHHhcCCcccCC---Cchh
Confidence 999999999999999987 56664432 5799999999999988 9999
Q ss_pred CCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCC-------CCccHHHHHHHHHHHcCCCCCCccEEEecC
Q 012506 290 NSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAI-------MGVGPAVAIPAAVKSAGLQLDDIDLFEINE 362 (462)
Q Consensus 290 ~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~-------~~~~~~~Ai~~aL~~AGl~~~DID~~eihd 362 (462)
|||+++|||+++||++++.|+++ .++.++|.|++.....+.. +..++..+++++|+++||+++|||++|+||
T Consensus 200 ~~~~~~DGaaa~vl~s~~~a~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~did~~ei~d 278 (375)
T cd00829 200 DCCPVSDGAAAVVLASEERAREL-TDRPVWILGVGAASDTPSLSERDDFLSLDAARLAARRAYKMAGITPDDIDVAELYD 278 (375)
T ss_pred hcCCCCCceeEEEEecHHHHhhc-CCCCeEEEEEEEecCCccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecC
Confidence 99999999999999999999999 6677899999988765532 456778899999999999999999999999
Q ss_pred CCHHHHHHHHHHcCCCCC------------------CCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC-----CCcE
Q 012506 363 AFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR-----DCRF 419 (462)
Q Consensus 363 afa~~~~~~~e~LGl~~~------------------~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~-----~~~~ 419 (462)
+|++++++++|.||||++ |||++||.+++|||+|+||+++++|+++||+++++ ++++
T Consensus 279 ~F~~~~l~~~e~lGl~~~g~~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~qlrg~ag~~qv~~~~~ 358 (375)
T cd00829 279 CFTIAELLALEDLGFCEKGEGGKLVREGDTAIGGDLPVNTSGGLLSKGHPLGATGLAQAVEAVRQLRGEAGARQVPGARV 358 (375)
T ss_pred cChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCccccCCCchhcCCCCccHHHHHHHHHHHHHhcCCcccccCCCccE
Confidence 999999999999999984 89999999999999999999999999999998753 4699
Q ss_pred EEEEee
Q 012506 420 GVISMC 425 (462)
Q Consensus 420 gl~~~~ 425 (462)
++++..
T Consensus 359 ~l~~~~ 364 (375)
T cd00829 359 GLAHNI 364 (375)
T ss_pred EEEecC
Confidence 999874
|
The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. |
| >PRK06065 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-56 Score=457.00 Aligned_cols=337 Identities=17% Similarity=0.171 Sum_probs=278.5
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
++|+|||++.|||.|. .+.+..+|+.+|+++||+++|+++++||.+++++...........+..++..+|+. ..
T Consensus 9 ~~vaIvG~g~t~~~~~-----~~~~~~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~-~~ 82 (392)
T PRK06065 9 KRVAVIGAGLTLFRRR-----LLETPQELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGI-RK 82 (392)
T ss_pred CceEEEEecccCCcCC-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCC-CC
Confidence 5799999999999983 57789999999999999999999999999999863221111234667788899984 58
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCC---C-CChhhhhhhhhhcccccHHHHHHHHHH
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEG---S-VNPKVKAFEQAQNCLLPMGVTSENVAH 205 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~---~-~~~~~~~~~~~~~~~~~~g~~a~~~~~ 205 (462)
|.+.|+.+|+||..++..|+++|++|.+|+|||+|+|+|+........ . .++.+..+ ........|++.+++|++
T Consensus 83 ~~~~V~~~gasG~~al~~A~~~I~sG~ad~vLVvg~e~~~~~~~~~~~~~~~~~~~~~~~p-~g~~~~~~~Al~a~rym~ 161 (392)
T PRK06065 83 PVSRVYVGGATGVMTAIAGWYHVASGLCQKVLAVAEEKMSPARPHPQAVFRYIWDPILEKP-LNPNLIWIFAMEMHRYMA 161 (392)
T ss_pred CeEEEecCchhHHHHHHHHHHHHhCCCCCEEEEEEeecccccccchhHHHhhhccchhccC-CCccHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998653110000 0 01111111 111112348999999999
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCC
Q 012506 206 RFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGT 285 (462)
Q Consensus 206 ~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~ 285 (462)
+||+++|+++++++++|+||.+ ||++++++ ++|+|+++++|++.+|
T Consensus 162 ~yG~~~e~lA~vav~~~~~A~~-------------------NP~A~~r~------------~lt~e~vl~s~~ia~P--- 207 (392)
T PRK06065 162 TYGIKKEEIALVSVKNKRNALN-------------------NPYAQLGS------------KITVEDVLKSEVLVWP--- 207 (392)
T ss_pred HHCcCHHHHHHHHHHHHHhhcc-------------------CchhhhcC------------CCCHHHHhcCCcccCC---
Confidence 9999999999999999999987 88887654 4899999999999998
Q ss_pred cccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCC-------CCCccHHHHHHHHHHHcCCCC--CCcc
Q 012506 286 TTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPA-------IMGVGPAVAIPAAVKSAGLQL--DDID 356 (462)
Q Consensus 286 ~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~-------~~~~~~~~Ai~~aL~~AGl~~--~DID 356 (462)
+|.++||+++|||+|+||+|++.|++++.+|+ +|.+++... ++. ....++..+++++|+++|+++ +|||
T Consensus 208 l~l~d~~~~~DGAaA~vl~s~e~A~~l~~~~v-~I~g~~~~~-~~~~~~~~~~~~~~~~~~a~~~a~~~aGi~~p~~diD 285 (392)
T PRK06065 208 VQLLDVSPVSDGAAAIVLASEDLARRYTDTPV-WVEGVGWTL-DNTEWPNRDLAYPRYVEFAARMAYKMAGIERPRKEID 285 (392)
T ss_pred CchhhcCCCCCceEEEEEeCHHHHHhcCCCCE-EEEEEEEec-CccccccccccccHHHHHHHHHHHHHcCCCCchhhCc
Confidence 99999999999999999999999999998776 788887742 221 122234679999999999985 9999
Q ss_pred EEEecCCCHHHHHHHHHHcCCCCC------------------CCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC---
Q 012506 357 LFEINEAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR--- 415 (462)
Q Consensus 357 ~~eihdafa~~~~~~~e~LGl~~~------------------~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~--- 415 (462)
++|+||+|+++++.++|.||||++ |||++||++++|||+|+||+++++|+++||+++++
T Consensus 286 ~~ei~D~Fs~~~l~~~E~lG~~~~G~~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg~ag~rQ 365 (392)
T PRK06065 286 VAEPYDPFDYKELHHLEGLQLAKRGEAPKLLKEGVFDIDGDIPSSPSGGLLGVGNPIAAAGLMKVISIYWQLKGTAGKMQ 365 (392)
T ss_pred EEEecCCChHHHHHHHHHcCCCCCCcHHHHHHCCCccCCCCeeecCCCccccCCCCccHHHHHHHHHHHHHHhccccCCc
Confidence 999999999999999999999986 99999999999999999999999999999999864
Q ss_pred --CC-cEEEEEeecccc
Q 012506 416 --DC-RFGVISMCIGTG 429 (462)
Q Consensus 416 --~~-~~gl~~~~~G~G 429 (462)
++ +++|++...|.+
T Consensus 366 v~~a~~~~l~~~~Gg~~ 382 (392)
T PRK06065 366 VKKPVHTGVAQAWGDLM 382 (392)
T ss_pred CCCccceeEEecccccc
Confidence 46 799998744443
|
|
| >PRK06066 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-56 Score=453.58 Aligned_cols=347 Identities=18% Similarity=0.205 Sum_probs=276.4
Q ss_pred CCCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcC-CCc-cccCcEEEEeccCCCCccccHHHHHHHHcCC
Q 012506 48 YGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTN-VDP-SEVGDIVVGTVLAPGSQRASECRMAAFYAGF 125 (462)
Q Consensus 48 ~~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~ag-l~~-~~Id~vivG~~~~~~~~~~~~a~~~a~~~Gl 125 (462)
+|++|+|||++.|||+|. ..+.+..+|+.+|+++||+|+| |++ +|||.+++++. ............++..+|+
T Consensus 2 ~~~~vaIvG~g~t~~~~~----~~~~s~~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~-~~~~~~~~~~~~~~~~lg~ 76 (385)
T PRK06066 2 FLNRVAIVGIGWYGFRPT----TPEVSFREMMFEAASRAYKDAGNINPRRDVDSFISCQE-DFWEGIAIADEFAPDQIGG 76 (385)
T ss_pred CCCcEEEEEeeecCCcCC----CCCCCHHHHHHHHHHHHHHhcCCCCChhcCCEEEEecC-cccCcccccchhHHHHccc
Confidence 467899999999999862 2578899999999999999999 997 79999988642 1111011112345577888
Q ss_pred CCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCC--C-CCCCChhhhhhhhhhcccccHHHHHHH
Q 012506 126 PETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMA--W-EGSVNPKVKAFEQAQNCLLPMGVTSEN 202 (462)
Q Consensus 126 p~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~--~-~~~~~~~~~~~~~~~~~~~~~g~~a~~ 202 (462)
...|.+.+ |+|+..++..|+.+|++|.+|+|||+|+|+|+..... . ....++.|..+.........|++.+++
T Consensus 77 -~~~~~~~v---~~sg~~a~~~A~~aV~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~p~~~~al~a~r 152 (385)
T PRK06066 77 -AMRPTMTV---AGDGLQGLAHAVMHINSGLANVVVVEAHSKPSDILTFSDVVKFAMDPIYVRPIGPPNPHFIAGLDAVK 152 (385)
T ss_pred -CCCCeEEE---eCcHHHHHHHHHHHHHcCCCCEEEEEEEeeccCccchhhhhhcccCcceecccCCCcHHHHHHHHHHH
Confidence 34688887 8999999999999999999999999999998762110 0 011111121111111111246899999
Q ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC
Q 012506 203 VAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK 282 (462)
Q Consensus 203 ~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p 282 (462)
|+++||+++|+++++++++|+||.+ ||++++++ ++|+||+++++++.+|
T Consensus 153 ym~~yG~t~E~lA~Vavk~r~nA~~-------------------NP~A~~r~------------~~t~edvl~S~~ia~P 201 (385)
T PRK06066 153 FMSRKGITREDLALVVEKNKKAGLS-------------------NPRASYAS------------NISLEDVLSSEYVVYP 201 (385)
T ss_pred HHHHHCcCHHHHHHHHHHHHHHHhc-------------------CChhhcCC------------CCCHHHHhcCCcccCC
Confidence 9999999999999999999999997 88887644 4799999999999998
Q ss_pred CCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEec----cCCCCCCccHH--HHHHHHHHHcCCC--CCC
Q 012506 283 DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG----VDPAIMGVGPA--VAIPAAVKSAGLQ--LDD 354 (462)
Q Consensus 283 ~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~----~~p~~~~~~~~--~Ai~~aL~~AGl~--~~D 354 (462)
+|.+|||+++|||+|+||++++.|++++.+|+ +|.|++... ..+..+...+. .+++++|+++||+ ++|
T Consensus 202 ---l~~~d~~~~~DGAaAvvl~s~~~a~~l~~~pv-~I~g~g~~~~~~~~~~~~~~~~~~~~~Aa~~a~~~AGi~~p~~D 277 (385)
T PRK06066 202 ---LTELDIAPFVDGAIVVVLASEEVAKKLTDDPV-WIKGIGWSTESSNLETAELGKANYMRIAADMAYKMAGIESPRKE 277 (385)
T ss_pred ---chhhccCCCCCceEEEEEeCHHHHHhcCCCCE-EEEEEEEecCCcccccccccccHHHHHHHHHHHHHcCCCCCHHH
Confidence 99999999999999999999999999999888 999888743 23444444443 6999999999998 799
Q ss_pred ccEEEecCCCHHHHHHHHHHcCCCCC------------------CCCCCCCccccCCccchHHHHHHHHHHHHHHhcC--
Q 012506 355 IDLFEINEAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGARCVATLLHEMKRRG-- 414 (462)
Q Consensus 355 ID~~eihdafa~~~~~~~e~LGl~~~------------------~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~-- 414 (462)
||++|+||+|++++++++|.||||++ |||++||.+++|||+|+||+++++|+++||++++
T Consensus 278 iD~~ei~D~Ft~~~l~~~e~lG~~~~Ge~~~~v~~G~~~~~G~~PvN~~GG~la~Ghp~gatG~~~v~e~~~QL~g~Ag~ 357 (385)
T PRK06066 278 VDAAEVDDRYSYKELQHIEALRLSEEPEKDSLLREGNFDPQGELPVNPSGGHLAKGVPLEASGLSLLLDAVEYLRGEAGA 357 (385)
T ss_pred CcEEEEecCChHHHHHHHHHcCCCCCCchHHHHHCCCCCCCCCccccCCCchhcCCCccchhHHHHHHHHHHHHcccccc
Confidence 99999999999999999999999984 7999999999999999999999999999999875
Q ss_pred --CCCcEEEEEeeccc--ceeEEEEEEe
Q 012506 415 --RDCRFGVISMCIGT--GMGAAAVFER 438 (462)
Q Consensus 415 --~~~~~gl~~~~~G~--G~g~A~v~~~ 438 (462)
.+++++|++...|. +.+...|+|+
T Consensus 358 rQ~~a~~~l~~~~gg~~~~~~~v~v~~~ 385 (385)
T PRK06066 358 RQGKAERAVVASWRGIPTLTGSVVVVER 385 (385)
T ss_pred cCCCCcEEEEcCCCccCCccEEEEEEeC
Confidence 35789999863332 2233445553
|
|
| >PRK06158 thiolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-56 Score=457.41 Aligned_cols=343 Identities=20% Similarity=0.224 Sum_probs=279.8
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
++|+|||+++|||.|. .+.++.+|+.+|+++||+|+||++++||.+++++.... .+...++..+|++ ..
T Consensus 8 ~~vaIvG~g~t~~~~~-----~~~t~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~~~~-----~~~~~la~~lGl~-~~ 76 (384)
T PRK06158 8 GRTAIVGAATAGLGEA-----PGLSAMELLAQAAHRALADAGLTMADVDGLFTASPDDA-----LWGLSVAEYLGIR-PR 76 (384)
T ss_pred CCEEEEEeeeccceeC-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCC-----CcHHHHHHHcCCC-Ce
Confidence 7899999999999873 67899999999999999999999999999999874321 2234688889995 57
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEE-eecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhC
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGA-GLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFG 208 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~-G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g 208 (462)
+.+.++.+|+|+..++..|+++|++|.+|+|||+ |.|+++.............|..+.........|++.+++|+++||
T Consensus 77 ~~~~~~~g~~s~~~al~~A~~~I~sG~~d~vLV~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~al~a~~ym~~yG 156 (384)
T PRK06158 77 FVDGTMIGGSSFLAHLLPAALALEAGLCDVALICYGSNQRSAGGKLRSMLDPQPYEAPYKPVNPVSAYALAAARHMHQYG 156 (384)
T ss_pred eeccccCccHHHHHHHHHHHHHHHcCCCCEEEEeeccccccCcccccccccccchhcccCCCCcHHHHHHHHHHHHHHHC
Confidence 8888999999999999999999999999999986 777776421111101111122111111122358999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCccc
Q 012506 209 VTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTA 288 (462)
Q Consensus 209 isre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~ 288 (462)
+++|+++++++++|++|.+ ||++++++ ++|+|+++++||+.+| +|.
T Consensus 157 ~t~e~~a~vav~~~~~a~~-------------------NP~A~~~~------------~~t~e~vl~s~~ia~P---l~~ 202 (384)
T PRK06158 157 TTREQLAEVAVAARQWAQL-------------------NPEAFMRD------------PLTIDDVLAARMVSDP---LSV 202 (384)
T ss_pred cCHHHHHHHHHHHHHHHhc-------------------CchhhhCC------------CCCHHHHhcCCccCCC---Cch
Confidence 9999999999999999986 88887654 4799999999999998 999
Q ss_pred CCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEecc------CCCCCCccHHHHHHHHHHHcCCCCCCccEEEecC
Q 012506 289 GNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV------DPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINE 362 (462)
Q Consensus 289 ~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~------~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eihd 362 (462)
++||+++|||+|+||++++.|++++.+++ +|.+++.... .|+....+...+++++|++|||+++|||++|+||
T Consensus 203 ~d~~~~~DGAaAvVL~s~e~A~~l~~~~v-~i~g~~~~~~~~~~~~~~~~~~~~~~~aa~~A~~~AGi~p~DId~~ElyD 281 (384)
T PRK06158 203 RDCCLVTDGAGAVVMVRADRARDLPRPPV-YVLGAAAATWHRQISSMPDLTVTAAAESGPRAFAMAGLTPADIDVVELYD 281 (384)
T ss_pred hhcCCccCCeEEEEEecHHHHhhcCCCcE-EEEEEEEecCCcccccccchhhhHHHHHHHHHHHHcCCCHHHCcEEEecC
Confidence 99999999999999999999999987764 8888876432 1232333456799999999999999999999999
Q ss_pred CCHHHHHHHHHHcCCCCC------------------CCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC-----CCcE
Q 012506 363 AFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR-----DCRF 419 (462)
Q Consensus 363 afa~~~~~~~e~LGl~~~------------------~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~-----~~~~ 419 (462)
||++++++++|.||||++ |||++||++++||| |+||+++++|+++||+++++ ++++
T Consensus 282 ~Fs~~~l~~~E~lG~~~~Ge~~~~~~~G~~~~~G~~PvN~sGG~ls~Ghp-gatG~~~~~E~~~QLrg~ag~rQv~~a~~ 360 (384)
T PRK06158 282 AFTINTILFLEDLGFCAKGEGGAFVEGGRIAPGGRLPVNTNGGGLSCVHP-GMYGLFLLIEAVRQLRGEAGERQVAGAEV 360 (384)
T ss_pred CchHHHHHHHHHcCCCCCCcHHHHHHCCCCccCCCccccCCChhhcCCCC-chhhHHHHHHHHHHHcCCCCCCcCCCCCE
Confidence 999999999999999987 99999999999999 99999999999999998854 5789
Q ss_pred EEEEeeccccee-EEEEEEec
Q 012506 420 GVISMCIGTGMG-AAAVFERG 439 (462)
Q Consensus 420 gl~~~~~G~G~g-~A~v~~~~ 439 (462)
||++.+.|.+.. ..+||+++
T Consensus 361 gl~~~~Gg~~~~~~~~vl~~~ 381 (384)
T PRK06158 361 ALAHGNGGVLSSQATAILGTA 381 (384)
T ss_pred EEEECCCCcccceEEEEEecc
Confidence 999875443322 23466653
|
|
| >KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-57 Score=424.73 Aligned_cols=381 Identities=36% Similarity=0.532 Sum_probs=333.7
Q ss_pred CCCCCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCC
Q 012506 46 SVYGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGF 125 (462)
Q Consensus 46 ~~~~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Gl 125 (462)
++++..||+|...||||--. .-.++|.-+.||..++++.+|++..++.+.+|.||+|++++.-- -.|++|.+++.+|+
T Consensus 38 ~kn~~nivlvdgvrtpfl~s-gt~ykdlmphdlar~al~~ll~kt~lpke~~dyii~gtviqevk-tsniareaal~agf 115 (465)
T KOG1392|consen 38 KKNMPNIVLVDGVRTPFLVS-GTVYKDLMPHDLAREALKALLEKTKLPKEQLDYIICGTVIQEVK-TSNIAREAALLAGF 115 (465)
T ss_pred ccCCCceEEEecccCceeec-ccchhhhchhHHHHHHHHHHHHhccCCHHHhceeeehhhHHHHh-cchHHHHHHHhcCC
Confidence 35668999999999999653 35678999999999999999999999999999999999998764 67899999999999
Q ss_pred CCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCC-----------------------hh
Q 012506 126 PETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVN-----------------------PK 182 (462)
Q Consensus 126 p~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~-----------------------~~ 182 (462)
+..+|+++|..+|-|+.+|+.....+|++|.+|+++++|+|.||.+|.++.+.+. +.
T Consensus 116 sdktpahtvtmacissn~amttgmgliatg~~dvivaggvelmsdvpirhsrkmrklml~~nkak~~gqrl~l~s~fr~n 195 (465)
T KOG1392|consen 116 SDKTPAHTVTMACISSNVAMTTGMGLIATGNADVIVAGGVELMSDVPIRHSRKMRKLMLGMNKAKDVGQRLKLGSQFRKN 195 (465)
T ss_pred CCCCccceeeeehhccchhhhccceeEeeCCcCEEEEcceeecccCchhhhHHHHHHhhccccccchhhhhhHHhhhhhh
Confidence 9999999999999999999999999999999999999999999999986542111 01
Q ss_pred hhhhhh----hhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEE
Q 012506 183 VKAFEQ----AQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTI 258 (462)
Q Consensus 183 ~~~~~~----~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v 258 (462)
+..+.- .+...-.||..+.+++..|++||.+||+|+.+||.-|..|++.|+|-| +||+++.-++|+ +
T Consensus 196 flapelpavaefstgetmghsadrlaaafnvsr~eqdeyalrshtlakeaq~~g~ftd-vvpfkv~gkd~~--------t 266 (465)
T KOG1392|consen 196 FLAPELPAVAEFSTGETMGHSADRLAAAFNVSRREQDEYALRSHTLAKEAQKNGKFTD-VVPFKVDGKDPK--------T 266 (465)
T ss_pred ccCcCcchheeccccccccccHHHHHHHhccchhhhhHHHHhhhHHHHHHHhcCcccc-eeeEecCCCCcc--------e
Confidence 111100 011224589999999999999999999999999999999999999986 689988666654 3
Q ss_pred eccCCCCCCCCHHHHhcCCCcc-cCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCC-CCCcc
Q 012506 259 SVDDGIRPNTSVSELAKLKPVF-KKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPA-IMGVG 336 (462)
Q Consensus 259 ~~d~~~r~~~t~e~l~~~~p~f-~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~-~~~~~ 336 (462)
.+|.|||. .|+|++.+++|+| +|.|++|+.|+|.++|||.|.++|++|+|...|.+|-++++.+-....+|. .+..+
T Consensus 267 ~kdngirv-ssle~laklkpafvkpygtvtaanasfltdgasa~limteekala~gykpkaylrdflyvsqdpkdqlllg 345 (465)
T KOG1392|consen 267 IKDNGIRV-SSLEKLAKLKPAFVKPYGTVTAANASFLTDGASAALIMTEEKALANGYKPKAYLRDFLYVSQDPKDQLLLG 345 (465)
T ss_pred ecCCCccc-CCHHHHhhcCchhccCcceeEecccchhcCcchhhhhhhHHHHHHcCCCchHHhhhheeeccCchhheecc
Confidence 47999997 8999999999999 679999999999999999999999999999999999999999988888884 56689
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCCCHHHHHHHHHH----------cCCC-------CCCCCCCCCccccCCccchHH
Q 012506 337 PAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNK----------LGLD-------PEKINVNGGALAIGHPLGTTG 399 (462)
Q Consensus 337 ~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~~~e~----------LGl~-------~~~vn~~GG~~a~Ghp~gatG 399 (462)
|.++++++|++|||+.+|||.||+||+|+-+.+.-+++ +|.. .++.|.+||.+++|||.||||
T Consensus 346 pay~ipkll~kagltlkdid~feiheafagqilanlkamdsdwfck~ymgr~~kvg~ppl~k~nnwggslsighpfgatg 425 (465)
T KOG1392|consen 346 PAYVIPKLLDKAGLTLKDIDVFEIHEAFAGQILANLKAMDSDWFCKEYMGRSGKVGRPPLDKLNNWGGSLSIGHPFGATG 425 (465)
T ss_pred cccccHHHHHHcCCcccccchhhhHHHHhHHHHhhhhhhcchHHHHHHhcccCccCCCChHHhcccCcceecCCcccccc
Confidence 99999999999999999999999999999987644433 3332 247999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEecc
Q 012506 400 ARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFERGD 440 (462)
Q Consensus 400 ~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~~~ 440 (462)
.|..-...+.|+++.| +||++..|..||+|.++++|+..
T Consensus 426 vrl~mh~anrl~~e~g--qygvvaacaaggqgvamlieayp 464 (465)
T KOG1392|consen 426 VRLAMHSANRLKEEKG--QYGVVAACAAGGQGVAMLIEAYP 464 (465)
T ss_pred hhhHHHHHhHHHhhcC--ceeEeehhhcCCcceEEEeeccC
Confidence 9999999999999998 99999999999999999999864
|
|
| >PRK08142 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-54 Score=443.14 Aligned_cols=331 Identities=19% Similarity=0.218 Sum_probs=274.1
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
++|+|||+++|||+|. .+.++.+|+.+|+++||+|+||+++|||.++++... . ... ...++..+|+ ...
T Consensus 5 ~~vaIvG~g~t~~~~~-----~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~---~-~~~-~~~~~~~lGl-~~~ 73 (388)
T PRK08142 5 GKAYIVGAYEHPTRKA-----PDKSVAQLHAEVAKGALADAGLSLADVDGYFCAGDA---P-GLG-PASMVDYLGL-KLR 73 (388)
T ss_pred CCEEEEEEeeccceeC-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCC---C-Ccc-HHHHHHhCCC-CCe
Confidence 6799999999999883 678899999999999999999999999997652211 1 111 1347789999 467
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCC------CCCC-CChhhhhhhhhhcccccHHHHHHH
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMA------WEGS-VNPKVKAFEQAQNCLLPMGVTSEN 202 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~------~~~~-~~~~~~~~~~~~~~~~~~g~~a~~ 202 (462)
+...++.+|+|+..++..|+..|++|.+|+|||+|+|+++..... +... ....|..+.. ......+++.+++
T Consensus 74 ~~~~v~~gg~s~~~a~~~A~~~I~sG~~d~vLvvg~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~Al~a~~ 152 (388)
T PRK08142 74 HVDSTETGGSSYLAHVGHAAQAIAAGKCSVALITLAGRPRSEGSSGTEPRNWGADAPDAPFEAPYG-PTTHNLYAMCAMR 152 (388)
T ss_pred eeccccCCcHHHHHHHHHHHHHHHcCCCCEEEEEeeeecccCCccccccccccccccccchhcccc-cccHHHHHHHHHH
Confidence 888999999999999999999999999999999999998643111 1100 0111222111 1122458899999
Q ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC
Q 012506 203 VAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK 282 (462)
Q Consensus 203 ~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p 282 (462)
|+++||.++|+++++++++|++|.+ ||++++++ ++|+|+++++|++.+|
T Consensus 153 ym~~yG~t~e~la~vav~~~~~A~~-------------------NP~A~~r~------------~~t~e~vl~s~~Ia~P 201 (388)
T PRK08142 153 HMHEYGTTSEQLAWIKVAASHHAQH-------------------NPHAMLRD------------VVTVEDVLNSPMIADP 201 (388)
T ss_pred HHHHHCcCHHHHHHHHHHHHHHhcc-------------------CChhhcCC------------CCCHHHHhcCCcccCC
Confidence 9999999999999999999999987 88887654 4799999999999998
Q ss_pred CCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEec-----cCCCCCCccHHHHHHHHHHHcCCCCCCccE
Q 012506 283 DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDDIDL 357 (462)
Q Consensus 283 ~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~-----~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~ 357 (462)
+|.++||+++|||+|+||++++.|++++.++ ++|.|++... ..|+........+++++|+++||+++|||+
T Consensus 202 ---l~l~d~~~~~DGAaA~vl~s~~~A~~l~~~~-v~I~g~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~AGi~~~did~ 277 (388)
T PRK08142 202 ---LHRLDCCVVTDGGGALVVVRPEIARSLKRPL-VKVLGAGEAIKGQMGGKVDLTYSGAAWSGPAAFAEAGVTPADIKY 277 (388)
T ss_pred ---chhhccCcccCceEEEEEecHHHHhhcCCCC-EEEEEEEEecCCccccCcccccHHHHHHHHHHHHHcCCCHHHCCE
Confidence 9999999999999999999999999998554 6999998753 234434345567999999999999999999
Q ss_pred EEecCCCHHHHHHHHHHcCCCCC-------------------CCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC---
Q 012506 358 FEINEAFASQFVYCRNKLGLDPE-------------------KINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR--- 415 (462)
Q Consensus 358 ~eihdafa~~~~~~~e~LGl~~~-------------------~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~--- 415 (462)
+|+||||++++++++|.||||++ |||++||.++.|||.|+||+++++|+++||+++++
T Consensus 278 ~elyD~Fs~~~~~~~E~lGl~~~Ge~~~~v~~g~~~~~~G~lPvN~sGG~l~~G~p~gatG~~~~~E~~~QLrG~ag~~r 357 (388)
T PRK08142 278 ASIYDSFTITVLMQLEDLGFCKKGEGGKFVADGNLISGVGKLPFNTDGGGLCNNHPANRGGMTKVIEAVRQLRGEAHPAV 357 (388)
T ss_pred EEEeccchHHHHHHHHHcCCCCCCchHHHHHCCCcccCCCCccccCCChhhcCCCcCcccHHHHHHHHHHHHcCCCCCCC
Confidence 99999999999999999999865 89999999999999999999999999999998752
Q ss_pred ---CCcEEEEEeecc
Q 012506 416 ---DCRFGVISMCIG 427 (462)
Q Consensus 416 ---~~~~gl~~~~~G 427 (462)
+++++|++.+.|
T Consensus 358 QV~~a~~gl~~~~Gg 372 (388)
T PRK08142 358 QVPNCDLALAHGTGG 372 (388)
T ss_pred CCCCCcEEEEeCCCC
Confidence 469999997433
|
|
| >PRK07937 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-52 Score=420.41 Aligned_cols=326 Identities=17% Similarity=0.172 Sum_probs=260.3
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCH-HHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCcccc-HHHHHHHHcCCCC
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYP-DDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRAS-ECRMAAFYAGFPE 127 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~-~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~-~a~~~a~~~Glp~ 127 (462)
++|+|+|+++|||+|.. .+.+. .||+.+|+++||+|+||+++|||.++.++. +...+.. ........+|+..
T Consensus 2 ~~vaIvG~g~t~~~~~~----~~~~~~~el~~eA~~~Al~DAgl~~~dID~~~~~~~--~~~~~~~~~~~~~~~~~G~~~ 75 (352)
T PRK07937 2 RDVAVVGFAQAPHVRRT----DGTTNGVEMLMPCFAELYAELGITKSDIGFWCSGSS--DYLAGRAFSFISAIDSIGAVP 75 (352)
T ss_pred CcEEEEEeeccccccCC----CCCCcHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcc--ccccccccchhhHHhhccCCC
Confidence 68999999999998831 23555 899999999999999999999998865432 2111221 1223445678732
Q ss_pred CcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCC-C-CCCCChhhhhhhhhhcccccHHHHHHHHHH
Q 012506 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMA-W-EGSVNPKVKAFEQAQNCLLPMGVTSENVAH 205 (462)
Q Consensus 128 ~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~-~-~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~ 205 (462)
..|...+++ +|..+|..|+++|++|.+|+|||+|+|+|+..... . ....++.+..+. .......|++.+++|++
T Consensus 76 ~~~~~~v~~---~g~~a~~~A~~aI~sG~~d~VLv~g~~k~~~~~~~~~~~~~~~~~~~~p~-G~~~~~~~Al~a~~ym~ 151 (352)
T PRK07937 76 PINESHVEM---DAAWALYEAWVKLLTGEVDTALVYGFGKSSAGTLRRVLALQLDPYTVAPL-WPDSVSMAGLQARAGLD 151 (352)
T ss_pred CCceEEecC---cHHHHHHHHHHHHhcCCCCEEEEEEecccCccchhhhhhccCCcceeccC-CCchHHHHHHHHHHHHH
Confidence 456666663 68889999999999999999999999998642111 0 011111111111 11223458999999999
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCC
Q 012506 206 RFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGT 285 (462)
Q Consensus 206 ~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~ 285 (462)
+||.++|+++++++++|+||.+ ||++++ | +|+||++++|++.+|
T Consensus 152 ~yG~t~e~lA~vavk~r~nA~~-------------------NP~A~~------------r--it~edvl~s~~ia~P--- 195 (352)
T PRK07937 152 AGKWTEEQMAEVAARSRADARR-------------------NPSAEP------------S--ISVDELLARPYFADP--- 195 (352)
T ss_pred HhCCCHHHHHHHHHHHHHHHhh-------------------Cchhhc------------c--CCHHHHhcCCcccCC---
Confidence 9999999999999999999997 888864 2 699999999999998
Q ss_pred cccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCC---ccHHHHHHHHHHHc-CCCCCCccEEEec
Q 012506 286 TTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMG---VGPAVAIPAAVKSA-GLQLDDIDLFEIN 361 (462)
Q Consensus 286 ~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~---~~~~~Ai~~aL~~A-Gl~~~DID~~eih 361 (462)
+|.+|||+++|||+|+||+++++|++++.+| ++|.|++.... +..+. ..+..+++++++++ |++++|||++|+|
T Consensus 196 L~l~d~~~~~DGAaA~vl~s~~~A~~l~~~p-v~I~g~~~~~~-~~~~~~~d~~~~~~~~~a~~~aAgi~~~diD~~Ei~ 273 (352)
T PRK07937 196 LRRHDIAPITDGAAAVVLAAGDRARELRERP-AWITGIEHRIE-SPSLGARDLTRSPSTALAAEAATGGDAGGVDVAELH 273 (352)
T ss_pred chhhcCCCCCCcceEEEEecHHHHHHcCCCc-EEEEEEEEeeC-CccccccccccHHHHHHHHHHhcCCCHHHCCEEEEe
Confidence 9999999999999999999999999999888 79999988543 32222 34556777888885 9999999999999
Q ss_pred CCCHHHHHHHHHHcCCCCC-CCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeec
Q 012506 362 EAFASQFVYCRNKLGLDPE-KINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCI 426 (462)
Q Consensus 362 dafa~~~~~~~e~LGl~~~-~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~ 426 (462)
|+|++++++++|.|||+.+ |||++||.++ |||.|+||+++++|+++||++++. +++|++...
T Consensus 274 D~F~~~~l~~~e~lGl~g~~pvN~~GG~l~-ghp~gatG~~~~~e~~~QL~g~~a--~~~l~~~~G 336 (352)
T PRK07937 274 APFTHQELILREALGLGDKTKVNPSGGALA-ANPMFAAGLERIGEAARHIWDGSA--RRALAHATS 336 (352)
T ss_pred CCChHHHHHHHHHcCCCCCCCcCCCccchh-cCchhHHHHHHHHHHHHHHhccCC--CEEEEeccc
Confidence 9999999999999999764 9999999999 999999999999999999999865 999998633
|
|
| >PRK07855 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-51 Score=422.86 Aligned_cols=337 Identities=16% Similarity=0.128 Sum_probs=269.5
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
++|+|||+++|||.|. .+.++.+|+.+|+++||+|+||++++||.+++++. . . .. ...++..+|++...
T Consensus 4 ~~v~IvG~g~t~~~r~-----~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~-~-~--~~--~~~l~~~lGl~~~~ 72 (386)
T PRK07855 4 GKAAIVGIGATEFSKN-----SGRSELRLACEAVLAALDDAGLAPSDVDGLVTFTM-D-T--NP--EIAVARALGIGELK 72 (386)
T ss_pred CCEEEEEeeecccccC-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecC-c-c--cc--HHHHHHHCCCCCCc
Confidence 6799999999999873 57889999999999999999999999999987543 1 1 11 24578899994325
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEee--cCCCCCC-CC---CC-----CCCChhhhhhhhhhcccccHHH
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGL--ESMTVNP-MA---WE-----GSVNPKVKAFEQAQNCLLPMGV 198 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~--E~ms~~~-~~---~~-----~~~~~~~~~~~~~~~~~~~~g~ 198 (462)
+...|+.+|+|+..++..|++.|++|.+|+|||+|+ |.+.... .. .. ...++.+..+.........|++
T Consensus 73 ~~~~v~~gg~sg~~~~~~A~~~I~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~al 152 (386)
T PRK07855 73 FFSRIHYGGGAACATVQQAAMAVATGVADVVVCYRAFNERSGMRFGQGQTGLAENPTSTGVDYGWSYPHGLLTPAAWVAM 152 (386)
T ss_pred ceeeecCCcHHHHHHHHHHHHHHHCCCCCEEEEEeecccccccccccccccccccccccccchhhhhhcCCCChHHHHHH
Confidence 667899999999999999999999999999999998 3321110 00 00 0011122221110111235899
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCC
Q 012506 199 TSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKP 278 (462)
Q Consensus 199 ~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p 278 (462)
.+++|+++||.++|+++++++++|+||.+ ||++++++ .++|+|+++++|+
T Consensus 153 ~a~~ym~~~G~t~e~lA~vavk~~~~A~~-------------------NP~A~~~~-----------~~~t~e~vl~s~~ 202 (386)
T PRK07855 153 LARRYMHEYGATSEDFGRVAVADRKHAAT-------------------NPKAWFYG-----------RPITLEDHQNSRW 202 (386)
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHhc-------------------ChHhhhcC-----------CCCCHHHHhcCCc
Confidence 99999999999999999999999999987 78887531 2479999999999
Q ss_pred cccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCC----------CC-c-cHHHHHHHHHH
Q 012506 279 VFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAI----------MG-V-GPAVAIPAAVK 346 (462)
Q Consensus 279 ~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~----------~~-~-~~~~Ai~~aL~ 346 (462)
+.+| +|.++||+++|||+|+||++++.|++++.+|+ +|.+++... ++.. +. . ....+++++|+
T Consensus 203 Ia~P---l~~~d~~~~sDGAaAvvl~see~A~~l~~~pv-~I~g~~~~~-~~~~~~~~~~~~~d~~~~~~~~~aa~~a~~ 277 (386)
T PRK07855 203 IAEP---LRLLDCCQESDGAVALVVTSAERARDLKQRPA-VIKAAAQGS-GADQYMMTSYYRDDITGLPEMGLVARQLWA 277 (386)
T ss_pred ccCC---chhhhcCCcCCceEEEEEecHHHHhhCCCCCE-EEEEEEEec-CCccccccccccccccccchHHHHHHHHHH
Confidence 9998 99999999999999999999999999998886 999998743 2211 11 1 12369999999
Q ss_pred HcCCCCCCccEEEecCCCHHHHHHHHHHcCCCCC------------------CCCCCCCccccCCccchHHHHHHHHHHH
Q 012506 347 SAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGARCVATLLH 408 (462)
Q Consensus 347 ~AGl~~~DID~~eihdafa~~~~~~~e~LGl~~~------------------~vn~~GG~~a~Ghp~gatG~~~~~~~~~ 408 (462)
++||+++|||++|+||||++++++++|.||||++ ||||+||.++.|||. |+.+++|+++
T Consensus 278 ~AGi~~~DiDv~El~D~Ft~~~l~~~E~lG~~~~Ge~~~~v~~G~~~~~G~lPvN~sGGll~~gh~~---G~~~i~E~~~ 354 (386)
T PRK07855 278 QSGLGPADIDTAILYDHFTPFVLMQLEELGFCGRGEAKDFIADGALELGGRLPINTHGGQLGEAYIH---GMNGIAEAVR 354 (386)
T ss_pred HcCCCHHHCcEEEeccCCcHHHHHHHHHcCCCCCCcHHHHHHCCCcccCCcccccCCCcccccCchh---hHHHHHHHHH
Confidence 9999999999999999999999999999999976 999999999999987 8889999999
Q ss_pred HHHhcCC----CCcEEEEEeecccceeEEEEE
Q 012506 409 EMKRRGR----DCRFGVISMCIGTGMGAAAVF 436 (462)
Q Consensus 409 qL~~~~~----~~~~gl~~~~~G~G~g~A~v~ 436 (462)
||+++++ +++++|++. +||....++||
T Consensus 355 QLrG~a~~QV~~a~~gl~~~-~Gg~~~~~~~~ 385 (386)
T PRK07855 355 QLRGTSVNQVPGVENVLVTA-GTGVPTSGLIL 385 (386)
T ss_pred HHhCCCcccCCCCcEEEEEC-CCCccceeEEe
Confidence 9998753 568999986 44445556665
|
|
| >PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-51 Score=402.93 Aligned_cols=252 Identities=46% Similarity=0.712 Sum_probs=207.3
Q ss_pred CCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCC
Q 012506 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (462)
Q Consensus 49 ~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~ 128 (462)
|++||||++.||||++ ++|.|++.++.||+.++++++|++++|++++||.+++|++.+... +++++|.+++.+|+|.+
T Consensus 1 M~~v~Iv~a~RTPfg~-~~G~l~~~~~~~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~-g~~~ar~~~l~aGl~~~ 78 (264)
T PF00108_consen 1 MRDVVIVGAVRTPFGK-FGGSLADVSPEDLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGE-GQNIARQAALAAGLPES 78 (264)
T ss_dssp -TTEEEEEEEEE--EC-TTSTTTTS-HHHHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTT-TCHHHHHHHHHTTS-TT
T ss_pred CCCEEEEEeeeCcccc-CCCccCCCCHHHHHHHHHHHHHHhcccchhhhhhcCccccccccc-chhhhhhhhhhcccccc
Confidence 5789999999999996 789999999999999999999999999999999999999998887 88999999999999989
Q ss_pred cceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCC-----CCCCh------hhhhhhhhhcccccHH
Q 012506 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWE-----GSVNP------KVKAFEQAQNCLLPMG 197 (462)
Q Consensus 129 ~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~-----~~~~~------~~~~~~~~~~~~~~~g 197 (462)
+|+++|+++|+||++||.+|+..|++|++|++|++|+|+||+.|+... ..+.. .+.+......+..+||
T Consensus 79 vp~~~V~~~CaSG~~Av~~a~~~I~sG~~dvvlagGvE~mS~~p~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~Mg 158 (264)
T PF00108_consen 79 VPATTVNRACASGLQAVHLAAMAIASGEADVVLAGGVESMSRVPMGLSSRRWGAPLGDAKLEDSLLRDGLYDPYAGQPMG 158 (264)
T ss_dssp SEEEEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEETTTSCEEECCTTSTSSSSGEEEEEHHHHHTTCCTTTTSHHH
T ss_pred cceeeehhhhhHHHHHHHHhhhhhcCCCccEEEEecccccccccccccccccccccCccccccccccccccccccccccc
Confidence 999999999999999999999999999999999999999999887542 12222 1111112234557899
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCC
Q 012506 198 VTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLK 277 (462)
Q Consensus 198 ~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~ 277 (462)
+++|+++++||||||+||+||++||++|.+|+++|+|++||+||+++.++ + +++++++||++|+++|+|+|.++|
T Consensus 159 ~tAE~~a~~ygisRee~D~~A~~Sh~rA~~A~~~G~f~~eIvpv~~~~~~---g--~~~~~~~De~~r~~~~~e~l~~L~ 233 (264)
T PF00108_consen 159 ITAENLAKKYGISREEQDEYAVRSHQRAAAAQDEGRFDDEIVPVEVPDKK---G--EEVTVDRDEGIRPDTTLEKLAKLK 233 (264)
T ss_dssp HHHHHHHHHHT--HHHHHHHHHHHHHHHHHHHHTTTTTTTBE-EEEEETT---S--EEEEE-S-STCGTT--HHHHHTS-
T ss_pred cccccccccCCcCHHHHhhhhhcCHHHHHHhccccchhhheeeEeeeccc---c--ceeeeeccchhhcchhHHHHhccc
Confidence 99999999999999999999999999999999999999999999885422 1 235899999999999999999999
Q ss_pred CcccCC-CCcccCCCCCcCCcceEEEEeCHH
Q 012506 278 PVFKKD-GTTTAGNSSQVSDGAGAVLLMKRS 307 (462)
Q Consensus 278 p~f~p~-g~~t~~~~s~~sDGAaAvvL~s~e 307 (462)
|+|.++ |++|.+|+|+++|||+++||+++|
T Consensus 234 p~f~~~~G~vTagnss~~~DGAaa~~l~see 264 (264)
T PF00108_consen 234 PAFRKDGGTVTAGNSSPLNDGAAAVLLMSEE 264 (264)
T ss_dssp BSSSTTTSS-BTTTB--BEEEEEEEEEEEHH
T ss_pred ccccccccccccccCCCccchhheEEEeecC
Confidence 999987 999999999999999999999986
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B .... |
| >PRK08257 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-49 Score=420.13 Aligned_cols=349 Identities=20% Similarity=0.198 Sum_probs=275.3
Q ss_pred CCcEEEEEeeecccccCCCCCCCC--CCHHHHHHHHHHHHHHHcCCC--ccccCcEEEEeccCCCCccccHHHHHHHHcC
Q 012506 49 GDDVVIVAAYRTALCKSKRGGFKD--TYPDDLLAPVLKAVIEKTNVD--PSEVGDIVVGTVLAPGSQRASECRMAAFYAG 124 (462)
Q Consensus 49 ~~~v~Ivg~~rTp~~~~~~g~~~d--~~~~eL~~~A~~~Al~~agl~--~~~Id~vivG~~~~~~~~~~~~a~~~a~~~G 124 (462)
++.++|||+++|+|++.. .+ .++.+|+.+|+++||+|+|++ +++||.+++++..... ..+....++..+|
T Consensus 3 ~~~~~IVGvG~t~~~~~~----~~~~~s~~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~~--~~~~~~~la~~lG 76 (498)
T PRK08257 3 PRTPVIVGVGQVTERPDD----PAYGLEPVDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSWR--YRDPPGLLAERLG 76 (498)
T ss_pred CCcEEEEEeeecccccCC----cccCCCHHHHHHHHHHHHHHhcCCCcCHHHCCEEEEecccccc--ccCHHHHHHHHcC
Confidence 378999999999998731 13 389999999999999999999 9999999998765432 3455678899999
Q ss_pred CCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCC--------CCCCC-C---------hhhhhh
Q 012506 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMA--------WEGSV-N---------PKVKAF 186 (462)
Q Consensus 125 lp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~--------~~~~~-~---------~~~~~~ 186 (462)
+. ..+......+|+|++.+++.|+.+|++|++|+|||+|+|+|+..+.. |.... . ......
T Consensus 77 l~-p~~~~~~~~GG~s~~~~v~~Aa~~IasG~advVLv~G~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (498)
T PRK08257 77 AD-PARTVYSPVGGNSPQRLVNEAALRIAAGEADVALVAGAEAQSTATKLRKAGEKLDWTPQDEGPLADRGGDPRPMASP 155 (498)
T ss_pred CC-CcceeEecCCCHHHHHHHHHHHHHHHCCCCCEEEEeeeeeccccchhccccccccccccccccccccccccccccch
Confidence 94 45555667788899999999999999999999999999998754211 11000 0 000001
Q ss_pred hhhhcc----cccHHHHHHHHHHHhCCCHHH-HHHHHH---HHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEE
Q 012506 187 EQAQNC----LLPMGVTSENVAHRFGVTRKE-QDQAAV---DSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTI 258 (462)
Q Consensus 187 ~~~~~~----~~~~g~~a~~~~~~~gisre~-~~~~a~---~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v 258 (462)
++.... ...+++.+.+|+++||+|+|+ +++++. ++|++|.+ ||++++++
T Consensus 156 ~e~~~G~~~p~~~yal~a~ay~~~~G~t~e~~~a~~a~l~~~~~~~Aa~-------------------NP~A~~r~---- 212 (498)
T PRK08257 156 AELRHGLDRPVYVYPLFENALRAALGRSPEEHRAEMGELWAPFSAVAAK-------------------NPHAWIPR---- 212 (498)
T ss_pred hhhhcCCCCcchHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHhh-------------------CHHHhhCC----
Confidence 111111 235789999999999999998 444444 78999887 78887654
Q ss_pred eccCCCCCCCCHHHHh----cCCCcccCCCCcccCCCCC-cCCcceEEEEeCHHHHHhcCCC--ceEEEEEEEEeccCC-
Q 012506 259 SVDDGIRPNTSVSELA----KLKPVFKKDGTTTAGNSSQ-VSDGAGAVLLMKRSVAMRKGLP--ILGVFRTFAAVGVDP- 330 (462)
Q Consensus 259 ~~d~~~r~~~t~e~l~----~~~p~f~p~g~~t~~~~s~-~sDGAaAvvL~s~e~A~~~g~~--~~~~i~g~~~~~~~p- 330 (462)
++|+|+++ ++|++.+| +|+++||+ .+|||+|+||+|+++|++++++ ...++.|++......
T Consensus 213 --------~~t~eevl~~~~~~rmIa~P---l~~ldca~~~~DGaaAvil~S~e~A~~l~~~~~~~V~i~g~a~~~~~~~ 281 (498)
T PRK08257 213 --------ERSAEEIVTPTPDNRMIAWP---YTKLMNANDMVDQGAAVLLTSVAKARRLGVPEDRWVYLHGGADAHDPYD 281 (498)
T ss_pred --------CCCHHHHhcccCCCCeeeCC---ccHhhcCCCCcccceEEEEeeHHHHHhcCCCCCceEEEEEEEEeeCccc
Confidence 47999999 68899888 99999996 8999999999999999999853 245888887763221
Q ss_pred ----CCCCccH--HHHHHHHHHHcCCCCCCccEEEecCCCHHHHHHHHHHcCCCCC---CCCCCCCccccCCccchHHHH
Q 012506 331 ----AIMGVGP--AVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPE---KINVNGGALAIGHPLGTTGAR 401 (462)
Q Consensus 331 ----~~~~~~~--~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~~~e~LGl~~~---~vn~~GG~~a~Ghp~gatG~~ 401 (462)
..+...+ ..+++++|++|||+++|||++|+||||++.+++++|+||||++ |+|++||++++|||+|+||++
T Consensus 282 ~~~r~~~~~~~~~~~aa~~a~~~AGi~~~Did~~elydcF~~~~~~~~E~LGl~~~g~~pvN~sGGl~s~G~P~~a~g~~ 361 (498)
T PRK08257 282 ILERPDLHRSPAIRAAGRRALALAGLGIDDIDAFDLYSCFPSAVQVAARELGLDLDDPRPLTVTGGLPFFGGPGNNYVTH 361 (498)
T ss_pred cccccccccChHHHHHHHHHHHHhCCCHHHCCEEEeccCCHHHHHHHHHHcCcCCCCCCCcCCCcChhhcCCchhhHHHH
Confidence 1122233 3599999999999999999999999999999999999999988 999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEeecccce-eEEEEEEecc
Q 012506 402 CVATLLHEMKRRGRDCRFGVISMCIGTGM-GAAAVFERGD 440 (462)
Q Consensus 402 ~~~~~~~qL~~~~~~~~~gl~~~~~G~G~-g~A~v~~~~~ 440 (462)
+++|+++||+++.+ ++||++.++|.+. ....|++++.
T Consensus 362 ~i~E~v~QLRg~~~--~~gLv~~~GG~~~~~~~~vl~~~p 399 (498)
T PRK08257 362 AIAEMVERLRANPG--RRGLVTANGGYLTKHSVGVYSTEP 399 (498)
T ss_pred HHHHHHHHHhhcCC--CEEEEECCCChhhceEEEEEeCCC
Confidence 99999999999876 8999997433322 2355777764
|
|
| >KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-50 Score=372.33 Aligned_cols=335 Identities=22% Similarity=0.332 Sum_probs=279.4
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
-+|+|||++.|.|.|. |...+.+.-||+.+|+..||+|+++..++|+.-++|.+.++...|+ .+-..+|+ +..
T Consensus 6 ~rvyvvgvgmtkf~kp--g~~~~~dypd~a~ea~tkal~da~ikys~vqqa~vgyvfgdstcgq----raiyevgm-tgi 78 (408)
T KOG1406|consen 6 PRVYVVGVGMTKFEKP--GRVADWDYPDFAKEAITKALQDAGIKYSEVQQAVVGYVFGDSTCGQ----RAIYEVGM-TGI 78 (408)
T ss_pred ceEEEEecceeeecCC--CcccCCCCchHHHHHHHHHHHhcCCCHHHHHhhhheeeecCCccch----HHHHhccc-cCc
Confidence 5899999999999985 6678889999999999999999999999999999999998765333 44557899 589
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCC---CC--CCChhhhhhhh------hhcccccHHH
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAW---EG--SVNPKVKAFEQ------AQNCLLPMGV 198 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~---~~--~~~~~~~~~~~------~~~~~~~~g~ 198 (462)
|.+.||+.|++|..++.++-+.|++|..|+||+.|+|+|++..... .+ .++..+....+ +.-....||.
T Consensus 79 pi~nvnnncatgssalflakqiiesgn~dcvlalgfekm~~gsl~~k~~dra~p~dkhi~~m~e~ygl~a~pmaaqmfgn 158 (408)
T KOG1406|consen 79 PIYNVNNNCATGSSALFLAKQIIESGNSDCVLALGFEKMERGSLSNKAADRALPVDKHISVMSETYGLEAAPMAAQMFGN 158 (408)
T ss_pred ceeeccCccccCchHHHHHHHHHhcCCcceEEeechhhhCCcccchhhhhccCcchhhHHHHHhhccCCCCcchHHHhhh
Confidence 9999999999999999999999999999999999999999765421 11 11111111111 1111245788
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCC
Q 012506 199 TSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKP 278 (462)
Q Consensus 199 ~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p 278 (462)
....+|++||..+|.+++++.++|.+... ||+.+++++ +|+|++.+++-
T Consensus 159 agkehmekygtk~ehfakiawknhkhsvn-------------------npysqf~de------------ysldqvm~s~~ 207 (408)
T KOG1406|consen 159 AGKEHMEKYGTKPEHFAKIAWKNHKHSVN-------------------NPYSQFRDE------------YSLDQVMKSPQ 207 (408)
T ss_pred hHHHHHHHhCCCHHHHhHhhhhccccccC-------------------ChhHhhhhh------------ccHHHHhcchH
Confidence 99999999999999999999999988654 787766533 79999999999
Q ss_pred cccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCce-EEEEEEEEeccCCCCC---------Ccc-HHHHHHHHHHH
Q 012506 279 VFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPIL-GVFRTFAAVGVDPAIM---------GVG-PAVAIPAAVKS 347 (462)
Q Consensus 279 ~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~-~~i~g~~~~~~~p~~~---------~~~-~~~Ai~~aL~~ 347 (462)
+|+ ++|.+.|||.+||++|.||.|+...+++|++-. .+|+|.-....+|..+ +.. ...+.++++++
T Consensus 208 v~d---flt~lqccptsdgaaaailaseafv~k~gl~~qaveivg~em~td~ps~faeks~ikm~gfdm~~~aa~~l~ak 284 (408)
T KOG1406|consen 208 VVD---FLTKLQCCPTSDGAAAAILASEAFVRKHGLEKQAVEIVGMEMATDPPSTFAEKSLIKMAGFDMTRLAAKRLFAK 284 (408)
T ss_pred HHH---HHHHhhcCCCCCchHHHHHhHHHHHHhcccHHHHHHHHHHHhccCCchhhhhhhhhhhhcchHHHHHHHHHHHH
Confidence 997 499999999999999999999999999998643 2566665555555432 122 25689999999
Q ss_pred cCCCCCCccEEEecCCCHHHHHHHHHHcCCCCC------------------CCCCCCCccccCCccchHHHHHHHHHHHH
Q 012506 348 AGLQLDDIDLFEINEAFASQFVYCRNKLGLDPE------------------KINVNGGALAIGHPLGTTGARCVATLLHE 409 (462)
Q Consensus 348 AGl~~~DID~~eihdafa~~~~~~~e~LGl~~~------------------~vn~~GG~~a~Ghp~gatG~~~~~~~~~q 409 (462)
.|++|.||+++|+||||+..+++..|+||||++ -|||+||+|+-|||+||||+.|.+|+.+|
T Consensus 285 sgltpndvqvielhdcfs~nelityealglcpegqg~~~vdrgdntyggkwvinpsggliskghplgatglaqcaelcwq 364 (408)
T KOG1406|consen 285 SGLTPNDVQVIELHDCFSANELITYEALGLCPEGQGGEFVDRGDNTYGGKWVINPSGGLISKGHPLGATGLAQCAELCWQ 364 (408)
T ss_pred cCCCcccceEEEeecccchhhhhhHHHhcCCCCCCCceeeecCCCccCceEEECCCCccccCCCcCccchHHHHHHHHHH
Confidence 999999999999999999999999999999987 58999999999999999999999999999
Q ss_pred HHhcCC-----CCcEEEEEee
Q 012506 410 MKRRGR-----DCRFGVISMC 425 (462)
Q Consensus 410 L~~~~~-----~~~~gl~~~~ 425 (462)
||+..+ +++.+|-|..
T Consensus 365 lrg~agkrqvpnakvalqhnl 385 (408)
T KOG1406|consen 365 LRGLAGKRQVPNAKVALQHNL 385 (408)
T ss_pred HhhhhccccCCCchhhhhhcc
Confidence 998765 5788888864
|
|
| >PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.2e-32 Score=237.34 Aligned_cols=123 Identities=53% Similarity=0.895 Sum_probs=110.3
Q ss_pred CCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCC
Q 012506 314 LPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGH 393 (462)
Q Consensus 314 ~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Gh 393 (462)
++|+++|++++..+++|..|+.+|..|++++|+++|++++|||+||+||+|+.+++.++|+||++++|||++||.+++||
T Consensus 1 l~pla~i~~~~~~~~~P~~~~~~p~~A~~~al~~ag~~~~did~~Ei~EaFA~~~l~~~~~lg~~~~~vN~~GG~la~GH 80 (123)
T PF02803_consen 1 LKPLARIVGYASAGVDPEDMGLGPVPAARKALERAGLTPDDIDVIEINEAFAAQVLAFLEALGLDPEKVNPNGGALALGH 80 (123)
T ss_dssp --ESEEEEEEEEEE--GGGGGGTHHHHHHHHHHHHT--GGGESEEEE--SBHHHHHHHHHHHTTGGGGBSTT--HHHH-B
T ss_pred CCeEEEEEEEEEEecCHHHhCchHHHHHHHHHHHhCCCccccchhhccchhhhHHHHhhccccccccccCcccccccccc
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEe
Q 012506 394 PLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 394 p~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
|+||||+++++++++||+++++ ++|++++|+|+|+|.|++|||
T Consensus 81 P~gasG~r~~~~l~~~L~~~~~--~~gla~~~~ggG~g~a~ller 123 (123)
T PF02803_consen 81 PLGASGARLVVELAHQLRRRGG--RYGLAAICAGGGQGSAVLLER 123 (123)
T ss_dssp HTTTHHHHHHHHHHHHHHHHTT--SEEEEEEEETTTEEEEEEEEE
T ss_pred cccccccchhhhhHHHHHHhch--hhhhHHhcccceeeEEEEEEC
Confidence 9999999999999999999988 999999999999999999997
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C .... |
| >cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-28 Score=238.30 Aligned_cols=236 Identities=26% Similarity=0.321 Sum_probs=206.1
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHH
Q 012506 73 TYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAI 152 (462)
Q Consensus 73 ~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I 152 (462)
.+..+|+.+|++++|+++|+++++||.+++++..++.. .+..+..++..+|++ +.+.++++.+|+|++.||..|.++|
T Consensus 5 ~~~~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~-~~~~a~~i~~~lg~~-~~~~~~i~~~C~s~~~al~~A~~~i 82 (254)
T cd00327 5 ITASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGE-FSGAAGQLAYHLGIS-GGPAYSVNQACATGLTALALAVQQV 82 (254)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCcc-ccHHHHHHHHHhCCC-CCCcceeccHhHHHHHHHHHHHHHH
Confidence 34889999999999999999999999999999887654 567788999999996 7999999999999999999999999
Q ss_pred HccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcC
Q 012506 153 KAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAG 232 (462)
Q Consensus 153 ~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g 232 (462)
++|++|.+||+|+|..
T Consensus 83 ~~g~~~~~lv~~~e~~---------------------------------------------------------------- 98 (254)
T cd00327 83 QNGKADIVLAGGSEEF---------------------------------------------------------------- 98 (254)
T ss_pred HCCCCCEEEEEeccee----------------------------------------------------------------
Confidence 9999999999998760
Q ss_pred CCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhc
Q 012506 233 KFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRK 312 (462)
Q Consensus 233 ~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~ 312 (462)
..+|||+|+||++++.++++
T Consensus 99 ------------------------------------------------------------~~gdGAaa~vL~~~~~a~~~ 118 (254)
T cd00327 99 ------------------------------------------------------------VFGDGAAAAVVESEEHALRR 118 (254)
T ss_pred ------------------------------------------------------------eecceEEEEEECcHHHHHHC
Confidence 04899999999999999999
Q ss_pred CCCceEEEEEEEEeccCCC----CCCccHHHHHHHHHHHcCCCCCCccEEEecCCCHHHHHHHHHHcCCCCCC---CCCC
Q 012506 313 GLPILGVFRTFAAVGVDPA----IMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEK---INVN 385 (462)
Q Consensus 313 g~~~~~~i~g~~~~~~~p~----~~~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~~~e~LGl~~~~---vn~~ 385 (462)
+.+++.++.++......+. .....+..+++++|+++|++++|||+|++|++++.+.....+.+++++++ +|+.
T Consensus 119 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (254)
T cd00327 119 GAHPQAEIVSTAATFDGASMVPAVSGEGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVS 198 (254)
T ss_pred CCceEEEEEEEEEcCCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEccCCcCccccHHHHHHHHHHhCCCCCcee
Confidence 9999999999887654433 22345678999999999999999999999999999888888888887654 4789
Q ss_pred CCccccCCccchHHHHHHHHHHHHHHhc-------CCCCcEEEEEeecccceeEEEEE
Q 012506 386 GGALAIGHPLGTTGARCVATLLHEMKRR-------GRDCRFGVISMCIGTGMGAAAVF 436 (462)
Q Consensus 386 GG~~a~Ghp~gatG~~~~~~~~~qL~~~-------~~~~~~gl~~~~~G~G~g~A~v~ 436 (462)
++...+||+.+|++..++.+++.+++.+ .+ +..+..+++.||.+.+++|
T Consensus 199 ~~~~~~G~~~~as~~~~l~~~~~~~~~~~~~~~~~~~--~~~l~~~~g~Gg~~~~~~l 254 (254)
T cd00327 199 ATLIMTGHPLGAAGLAILDELLLMLEHEFIPPTPREP--RTVLLLGFGLGGTNAAVVL 254 (254)
T ss_pred ccccccccchHHHHHHHHHHHHHHHhCCCcCCCCCCc--CEEEEeeEcCCCcceEEEC
Confidence 9999999999999999999999999986 44 7888888777777777664
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. |
| >TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.9e-28 Score=250.78 Aligned_cols=272 Identities=22% Similarity=0.276 Sum_probs=195.4
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCc----EEEEeccCCCC-------------------------ccccHHHHHHHHcCC
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVGD----IVVGTVLAPGS-------------------------QRASECRMAAFYAGF 125 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id~----vivG~~~~~~~-------------------------~~~~~a~~~a~~~Gl 125 (462)
..+|+.+++++||+++|++++++|. +++|+..+... .....+..++..+|+
T Consensus 71 ~~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T TIGR03150 71 FIQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGA 150 (407)
T ss_pred HHHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHhCC
Confidence 4689999999999999999999987 66665322100 001234568888999
Q ss_pred CCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHH
Q 012506 126 PETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAH 205 (462)
Q Consensus 126 p~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~ 205 (462)
+.|.++++++|+|++.||..|+++|++|++|++||+|+|++... . ...+..+.+++.
T Consensus 151 --~g~~~~v~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~~-~--------------------~~~~~~~~~~ls 207 (407)
T TIGR03150 151 --KGPNHAVVTACATGTHAIGDAFRLIQRGDADVMIAGGAEAAITP-L--------------------GIAGFAAMKALS 207 (407)
T ss_pred --CCcccccccHHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCCH-H--------------------HHHHHHHhCccc
Confidence 68999999999999999999999999999999999999986541 0 000100000000
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCC
Q 012506 206 RFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGT 285 (462)
Q Consensus 206 ~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~ 285 (462)
+++. +|. . ..+| |+.
T Consensus 208 ~~~~-------------------------------------~~~------------~------------~~~p-fd~--- 222 (407)
T TIGR03150 208 TRND-------------------------------------DPE------------K------------ASRP-FDK--- 222 (407)
T ss_pred CCCC-------------------------------------CCC------------c------------CCCC-CcC---
Confidence 0000 000 0 1123 322
Q ss_pred cccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEecc-----CCCCCCccHHHHHHHHHHHcCCCCCCccEEEe
Q 012506 286 TTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV-----DPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEI 360 (462)
Q Consensus 286 ~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~-----~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~ei 360 (462)
..+...++|||+++||++++.|+++|.+++++|.|++.... .|...+.+...+++++|+++|++++|||++|+
T Consensus 223 --~~~g~~~gEGAaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~Agi~~~dId~ve~ 300 (407)
T TIGR03150 223 --DRDGFVMGEGAGVLVLEELEHAKARGAKIYAEIVGYGMSGDAYHITAPAPEGEGAARAMRAALKDAGINPEDVDYINA 300 (407)
T ss_pred --CCCcEEEeceEEEEEEeeHHHHHHCCCeEEEEEEEEEECCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHhHCCEEeC
Confidence 11333479999999999999999999999999999987652 34344456788999999999999999999999
Q ss_pred cCCCH----HHHHHHH-HHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcC---------------------
Q 012506 361 NEAFA----SQFVYCR-NKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG--------------------- 414 (462)
Q Consensus 361 hdafa----~~~~~~~-e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~--------------------- 414 (462)
|++++ ..+...+ +.+|-...+++++..+..+|||.||+|+.+++.++.+|+++.
T Consensus 301 h~tgt~~~D~~E~~a~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~v~~ 380 (407)
T TIGR03150 301 HGTSTPLGDKAETKAIKRVFGDHAYKLAVSSTKSMTGHLLGAAGAIEAIFTVLAIRDGVVPPTINLDNPDPECDLDYVPN 380 (407)
T ss_pred cCCCCCCCCHHHHHHHHHHhccCCCCCceeCCcchhchhHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccCC
Confidence 99999 5555554 456665444444444445799999999999999999999831
Q ss_pred --C--CCcEEEEEeecccceeEEEEE
Q 012506 415 --R--DCRFGVISMCIGTGMGAAAVF 436 (462)
Q Consensus 415 --~--~~~~gl~~~~~G~G~g~A~v~ 436 (462)
. ..++++++.+..||.+.++||
T Consensus 381 ~~~~~~~~~~l~~s~gfgG~n~~~vl 406 (407)
T TIGR03150 381 EARERKIDYALSNSFGFGGHNASLVF 406 (407)
T ss_pred CCccCCcCEEEEecccCCCceEEEEe
Confidence 1 236888887776777777776
|
FabB sequences should fall well below the noise cutoff of this model. |
| >PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-27 Score=248.35 Aligned_cols=276 Identities=21% Similarity=0.278 Sum_probs=203.6
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccC----cEEEEeccCCC-------------------------CccccHHHHHHHHcC
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPG-------------------------SQRASECRMAAFYAG 124 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~~Id----~vivG~~~~~~-------------------------~~~~~~a~~~a~~~G 124 (462)
....|+.+++.+||+|+|++++++| ++++|+..+.. ......+..++..+|
T Consensus 71 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 150 (411)
T PRK07314 71 RFIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYG 150 (411)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHhC
Confidence 3467899999999999999999998 46676543210 001124557888999
Q ss_pred CCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHH
Q 012506 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVA 204 (462)
Q Consensus 125 lp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~ 204 (462)
+ +.|.++++++|+|++.||..|+++|++|++|++||+|+|.++... ...+..+
T Consensus 151 l--~Gp~~tv~~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~---------------------~~~~~~~---- 203 (411)
T PRK07314 151 A--KGPNHSIVTACATGAHAIGDAARLIAYGDADVMVAGGAEAAITPL---------------------GIAGFAA---- 203 (411)
T ss_pred C--CCccccchhhhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCCHH---------------------HHHHHHH----
Confidence 9 689999999999999999999999999999999999999865310 0001000
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCC
Q 012506 205 HRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDG 284 (462)
Q Consensus 205 ~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g 284 (462)
.++... ...||.. . .+| |+.
T Consensus 204 ---------------------~~~ls~------------~~~~p~~------------~------------~~p-fd~-- 223 (411)
T PRK07314 204 ---------------------ARALST------------RNDDPER------------A------------SRP-FDK-- 223 (411)
T ss_pred ---------------------hccccC------------CCCCCCc------------C------------cCC-CcC--
Confidence 000000 0012221 1 123 432
Q ss_pred CcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEec-----cCCCCCCccHHHHHHHHHHHcCCCCCCccEEE
Q 012506 285 TTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFE 359 (462)
Q Consensus 285 ~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~-----~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~e 359 (462)
..+...++|||+++||++++.|+++|.+++++|.|++... ..|..++.+...+++++|+++|++++|||++|
T Consensus 224 ---~~dG~~~geGAaavvL~~~~~A~~~g~~~~a~I~g~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~agi~~~dId~v~ 300 (411)
T PRK07314 224 ---DRDGFVMGEGAGILVLEELEHAKARGAKIYAEVVGYGMTGDAYHMTAPAPDGEGAARAMKLALKDAGINPEDIDYIN 300 (411)
T ss_pred ---CCCCEeEEceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 1245558999999999999999999999999999998865 34555566678899999999999999999999
Q ss_pred ecCCCHH-H---HHHH-HHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC-------------------
Q 012506 360 INEAFAS-Q---FVYC-RNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR------------------- 415 (462)
Q Consensus 360 ihdafa~-~---~~~~-~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~------------------- 415 (462)
.|++++. . +... .+.+|....++++++.+..+|||.||+|+.+++..+.+|+++.-
T Consensus 301 ~hgtgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~~i~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~ 380 (411)
T PRK07314 301 AHGTSTPAGDKAETQAIKRVFGEHAYKVAVSSTKSMTGHLLGAAGAVEAIFSVLAIRDQVIPPTINLDNPDEECDLDYVP 380 (411)
T ss_pred ccccCCccccHHHHHHHHHHhcccCCCCeeECccchhchhHHHHHHHHHHHHHHHHhCCCcCCCCCCCCCCCCCCccccC
Confidence 9999883 2 3322 33456555567777777778999999999999999999998620
Q ss_pred ------CCcEEEEEeecccceeEEEEEEec
Q 012506 416 ------DCRFGVISMCIGTGMGAAAVFERG 439 (462)
Q Consensus 416 ------~~~~gl~~~~~G~G~g~A~v~~~~ 439 (462)
+.++++++.+..||.+.++||++.
T Consensus 381 ~~~~~~~~~~al~~s~gfGG~n~~~vl~~~ 410 (411)
T PRK07314 381 NEARERKIDYALSNSFGFGGTNASLVFKRY 410 (411)
T ss_pred CcccCCCCCEEEEecccCCCceEEEEEecC
Confidence 237788888888888999998864
|
|
| >PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.2e-27 Score=245.97 Aligned_cols=272 Identities=19% Similarity=0.315 Sum_probs=202.3
Q ss_pred HHHHHHHHHHHHHHHcCCCcccc-C----cEEEEeccCCCC-----------c--------------cccHHHHHHHHcC
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEV-G----DIVVGTVLAPGS-----------Q--------------RASECRMAAFYAG 124 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~I-d----~vivG~~~~~~~-----------~--------------~~~~a~~~a~~~G 124 (462)
...|+..++++||+++|++++++ + ++++|+..+... . ....+..++..+|
T Consensus 82 ~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 161 (424)
T PRK06333 82 FILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRYG 161 (424)
T ss_pred HHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHHHHHhC
Confidence 45688899999999999988777 4 467776533210 0 0123556888899
Q ss_pred CCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHH-HHHH
Q 012506 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVT-SENV 203 (462)
Q Consensus 125 lp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-a~~~ 203 (462)
+ ++|.++++++|+|++.||..|+.+|++|++|++||+|+|.+... . ...+.. ...+
T Consensus 162 l--~Gp~~~v~~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~~-~--------------------~~~~f~~~~~l 218 (424)
T PRK06333 162 F--KGPLGAPVTACAAGVQAIGDAARLIRSGEADVAVCGGTEAAIDR-V--------------------SLAGFAAARAL 218 (424)
T ss_pred C--CCCCccccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCH-H--------------------HHHHHHHcccc
Confidence 9 68999999999999999999999999999999999999986430 0 000000 0000
Q ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC-
Q 012506 204 AHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK- 282 (462)
Q Consensus 204 ~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p- 282 (462)
..+|+.+ | ++ ..+| |+.
T Consensus 219 ~~~~~~~-------------------------------------p------------~~------------~~~P-fd~~ 236 (424)
T PRK06333 219 STRFNDA-------------------------------------P------------EQ------------ASRP-FDRD 236 (424)
T ss_pred cccCCCC-------------------------------------C------------Cc------------CCCC-CCCC
Confidence 0000000 0 11 1234 433
Q ss_pred -CCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEecc-----CCCCCCccHHHHHHHHHHHcCCCCCCcc
Q 012506 283 -DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV-----DPAIMGVGPAVAIPAAVKSAGLQLDDID 356 (462)
Q Consensus 283 -~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~-----~p~~~~~~~~~Ai~~aL~~AGl~~~DID 356 (462)
+|.+ ++|||+++||++++.|+++|.+++++|.|++.... .|...+.+...+++++|+++||+++|||
T Consensus 237 ~~G~~-------~gEGaa~lvLe~~~~A~~rg~~i~a~i~G~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~Agi~p~dId 309 (424)
T PRK06333 237 RDGFV-------MGEGAGILVIETLEHALARGAPPLAELVGYGTSADAYHMTAGPEDGEGARRAMLIALRQAGIPPEEVQ 309 (424)
T ss_pred CCCeE-------EecceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCC
Confidence 3443 79999999999999999999999999999988643 2333345667899999999999999999
Q ss_pred EEEecCCCHH----HHHHHHH-HcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcC-----------------
Q 012506 357 LFEINEAFAS----QFVYCRN-KLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG----------------- 414 (462)
Q Consensus 357 ~~eihdafa~----~~~~~~e-~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~----------------- 414 (462)
++|.|++++. .+...++ .+| ...++++++++..+|||+||+|+.+++.++.+|+++.
T Consensus 310 ~i~~hgtgt~~~D~~E~~al~~~fg-~~~~~~v~s~K~~~GH~~gAaG~~~~~~~~l~l~~g~ipp~~~~~~~~~~~~~~ 388 (424)
T PRK06333 310 HLNAHATSTPVGDLGEVAAIKKVFG-HVSGLAVSSTKSATGHLLGAAGGVEAIFTILALRDQIAPPTLNLENPDPAAEGL 388 (424)
T ss_pred EEeccCCCCccchHHHHHHHHHHhC-CCCCceeECcccchhhhHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCcccc
Confidence 9999999997 5665554 456 3457899999999999999999999999999999831
Q ss_pred ---------CCCcEEEEEeecccceeEEEEEEec
Q 012506 415 ---------RDCRFGVISMCIGTGMGAAAVFERG 439 (462)
Q Consensus 415 ---------~~~~~gl~~~~~G~G~g~A~v~~~~ 439 (462)
...++++++....||.+.++||++.
T Consensus 389 ~~~~~~~~~~~~~~al~~s~gfGG~n~~~il~~~ 422 (424)
T PRK06333 389 DVVANKARPMDMDYALSNGFGFGGVNASILFRRW 422 (424)
T ss_pred ccccCCCcccCcCEEEEeeecCCCeeEEEEEecc
Confidence 0247888888777788888888764
|
|
| >PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.6e-26 Score=236.12 Aligned_cols=277 Identities=19% Similarity=0.292 Sum_probs=201.3
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCC-ccccCcEEEEeccCCCCcc-----------------------------ccHHHHHH
Q 012506 71 KDTYPDDLLAPVLKAVIEKTNVD-PSEVGDIVVGTVLAPGSQR-----------------------------ASECRMAA 120 (462)
Q Consensus 71 ~d~~~~eL~~~A~~~Al~~agl~-~~~Id~vivG~~~~~~~~~-----------------------------~~~a~~~a 120 (462)
++....+|+..++++||+++|++ +++++...+|.+.+....+ ...+..++
T Consensus 73 ~~~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is 152 (421)
T PTZ00050 73 RESRATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVA 152 (421)
T ss_pred cCCHHHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHH
Confidence 34556899999999999999998 7777764444443322100 12355678
Q ss_pred HHcCCCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHH
Q 012506 121 FYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTS 200 (462)
Q Consensus 121 ~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a 200 (462)
..+|+ ++|.+++.++|+|+++||..|+++|++|++|++||+|+|.+.. |.. ..+.
T Consensus 153 ~~~~l--~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~-p~~--------------------~~~f-- 207 (421)
T PTZ00050 153 IKHKL--KGPSGSAVTACATGAHCIGEAFRWIKYGEADIMICGGTEASIT-PVS--------------------FAGF-- 207 (421)
T ss_pred HHhCC--CCcccccccHhHHHHHHHHHHHHHHHcCCCCEEEECcccccCC-HHH--------------------HHHH--
Confidence 88899 6899999999999999999999999999999999999998543 100 0000
Q ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcc
Q 012506 201 ENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVF 280 (462)
Q Consensus 201 ~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f 280 (462)
.+. +.+.... ..+| ++. .+| |
T Consensus 208 ----------------------~~~------~~l~~~~------~~~p------------~~~------------~~p-f 228 (421)
T PTZ00050 208 ----------------------SRM------RALCTKY------NDDP------------QRA------------SRP-F 228 (421)
T ss_pred ----------------------Hhh------hccccCc------CCCC------------Ccc------------CCC-C
Confidence 000 0000000 0011 111 123 4
Q ss_pred cC--CCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEecc-----CCCCCCccHHHHHHHHHHH-cCCCC
Q 012506 281 KK--DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV-----DPAIMGVGPAVAIPAAVKS-AGLQL 352 (462)
Q Consensus 281 ~p--~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~-----~p~~~~~~~~~Ai~~aL~~-AGl~~ 352 (462)
+. +|. .++|||+++||++++.|+++|.+++++|+|++.... .|..++.++..+++++|++ |||++
T Consensus 229 d~~~~G~-------~~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~Al~~~Agi~~ 301 (421)
T PTZ00050 229 DKDRAGF-------VMGEGAGILVLEELEHALRRGAKIYAEIRGYGSSSDAHHITAPHPDGRGARRCMENALKDGANINI 301 (421)
T ss_pred cCCCCCE-------eeccceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCChHHHHHHHHHHHHhccCCCh
Confidence 43 343 379999999999999999999999999999998764 4555667788999999999 99999
Q ss_pred CCccEEEecCCCHH----HHH-HHHHHcCCCC-CCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC-----------
Q 012506 353 DDIDLFEINEAFAS----QFV-YCRNKLGLDP-EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR----------- 415 (462)
Q Consensus 353 ~DID~~eihdafa~----~~~-~~~e~LGl~~-~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~----------- 415 (462)
+|||++|+|++++. .+. .+.+.+|-.. +++.++.-+..+||++||+|+.+++.++..|+.+.-
T Consensus 302 ~dId~ie~hgtgt~~~D~~E~~al~~~~~~~~~~~~~v~s~K~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~~~ 381 (421)
T PTZ00050 302 NDVDYVNAHATSTPIGDKIELKAIKKVFGDSGAPKLYVSSTKGGLGHLLGAAGAVESIVTILSLYEQIIPPTINLENPDA 381 (421)
T ss_pred hhCCEEECCCccCCCCCHHHHHHHHHHhccccCCCceEECccccccccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCC
Confidence 99999999999983 232 3334455432 456666667779999999999999999999997520
Q ss_pred ----------------CCcEEEEEeecccceeEEEEEEe
Q 012506 416 ----------------DCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 416 ----------------~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
+.++.|+..+..||.+.++||++
T Consensus 382 ~~~l~~~~~~~~~~~~~~~~~l~nsfgfgG~n~~lvl~~ 420 (421)
T PTZ00050 382 ECDLNLVQGKTAHPLQSIDAVLSTSFGFGGVNTALLFTK 420 (421)
T ss_pred CCCccccCCcccCcCCCCCEEEEeeecCCCeeEEEEEeC
Confidence 12677888877788888998875
|
|
| >PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=5e-25 Score=223.13 Aligned_cols=272 Identities=16% Similarity=0.251 Sum_probs=197.2
Q ss_pred HHHHHHHHHHHHHHHcCCC--ccccCcEEEEeccCCCC-----------cc--------------ccHHHHHHHHcCCCC
Q 012506 75 PDDLLAPVLKAVIEKTNVD--PSEVGDIVVGTVLAPGS-----------QR--------------ASECRMAAFYAGFPE 127 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~--~~~Id~vivG~~~~~~~-----------~~--------------~~~a~~~a~~~Glp~ 127 (462)
...++..++++||+++|+. ++.+ ++++|+..+... .+ ...+..++..+|+
T Consensus 4 ~~~~~~~a~~~a~~~a~~~~~~~r~-Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~~l-- 80 (342)
T PRK14691 4 WWRYKWITFHPSLTHADNTEKQERT-ATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHF-- 80 (342)
T ss_pred HHHHHHHHHHHHHHhCCCCCCcccE-EEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHhCC--
Confidence 4578888999999999974 3333 577776544321 01 1246678889999
Q ss_pred CcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHh
Q 012506 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRF 207 (462)
Q Consensus 128 ~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~ 207 (462)
++|.+++.++|+|++.||..|++.|++|++|++||+|+|...... ...+...-
T Consensus 81 ~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~~~---------------------~~~~f~~~------ 133 (342)
T PRK14691 81 KGPIGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTV---------------------SLAGFAAA------ 133 (342)
T ss_pred CCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHH---------------------HHHHHHHh------
Confidence 689999999999999999999999999999999999999853300 00000000
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC--CCC
Q 012506 208 GVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK--DGT 285 (462)
Q Consensus 208 gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p--~g~ 285 (462)
++.. . .+. .+| ++. .+| ||. +|+
T Consensus 134 ----------------~~ls---~-~~~----------~~p------------~~~------------~rP-Fd~~r~G~ 158 (342)
T PRK14691 134 ----------------RALS---T-HFN----------STP------------EKA------------SRP-FDTARDGF 158 (342)
T ss_pred ----------------hhhh---c-CCC----------CCC------------CcC------------CCC-CCCCCCCc
Confidence 0000 0 000 011 111 234 654 455
Q ss_pred cccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccC-----CCCCCccHHHHHHHHHHHcCCCCCCccEEEe
Q 012506 286 TTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVD-----PAIMGVGPAVAIPAAVKSAGLQLDDIDLFEI 360 (462)
Q Consensus 286 ~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~-----p~~~~~~~~~Ai~~aL~~AGl~~~DID~~ei 360 (462)
+ ++|||+++||++++.|+++|.+++++|+|++..... |...+.++..+++++|+++||+++|||++|.
T Consensus 159 v-------~gEGAa~lvLes~~~A~~rG~~i~a~I~g~~~~~d~~~~~~p~p~~~~~~~ai~~AL~~Agl~p~dIdyIea 231 (342)
T PRK14691 159 V-------MGEGAGLLIIEELEHALARGAKPLAEIVGYGTSADAYHMTSGAEDGDGAYRAMKIALRQAGITPEQVQHLNA 231 (342)
T ss_pred c-------ccceEEEEEEeeHHHHHhCCCCceEEEEEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEe
Confidence 4 899999999999999999999999999999987654 4455677889999999999999999999999
Q ss_pred cCCCHHH----HHHHHH-HcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC--------------------
Q 012506 361 NEAFASQ----FVYCRN-KLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR-------------------- 415 (462)
Q Consensus 361 hdafa~~----~~~~~e-~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~-------------------- 415 (462)
|++++.. |...++ .+|-. .++.++.-+-.+||++||+|+.+++..+..|+++.-
T Consensus 232 HgtgT~~~D~~E~~Ai~~~fg~~-~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ippt~n~~~~d~~~~~~~~v~ 310 (342)
T PRK14691 232 HATSTPVGDLGEINAIKHLFGES-NALAITSTKSATGHLLGAAGGLETIFTVLALRDQIVPATLNLENPDPAAKGLNIIA 310 (342)
T ss_pred cCCCCcCCCHHHHHHHHHHhCCC-CCceEECCcccccCCcchhhHHHHHHHHHHHhCCccCCcCCCCCCCccccccCccc
Confidence 9999964 444443 45642 233333334459999999999999999989887520
Q ss_pred ------CCcEEEEEeecccceeEEEEEEec
Q 012506 416 ------DCRFGVISMCIGTGMGAAAVFERG 439 (462)
Q Consensus 416 ------~~~~gl~~~~~G~G~g~A~v~~~~ 439 (462)
+.++.|+..+..||.+.++||++.
T Consensus 311 ~~~~~~~~~~al~nsfgfGG~n~~lvl~~~ 340 (342)
T PRK14691 311 GNAQPHDMTYALSNGFGFAGVNASILLKRW 340 (342)
T ss_pred CCCccCCCCEEEEeCccCCCeeEEEEEeec
Confidence 136788888788888889998764
|
|
| >cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.1e-25 Score=222.19 Aligned_cols=275 Identities=20% Similarity=0.153 Sum_probs=201.8
Q ss_pred cEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCC----ccccCcEEEEeccCCCC----------------
Q 012506 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVD----PSEVGDIVVGTVLAPGS---------------- 110 (462)
Q Consensus 51 ~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~----~~~Id~vivG~~~~~~~---------------- 110 (462)
+++|+|.+.+ ..+|+.+|++++|+++|++ +++||.|++|+..+...
T Consensus 1 ~~~i~g~g~~--------------~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~ 66 (332)
T cd00825 1 RAVITGLGSY--------------VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYV 66 (332)
T ss_pred CceEEcccHH--------------HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcch
Confidence 3789999987 6799999999999999999 99999999998755431
Q ss_pred ----ccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhh
Q 012506 111 ----QRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAF 186 (462)
Q Consensus 111 ----~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~ 186 (462)
..+..+..++..+|+ +.|+++++.+|+|++.||..|.++|++|++|.+||+|+|.++.... .
T Consensus 67 ~~~~~~~~~a~~ia~~lgl--~g~~~~v~~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~-----------~- 132 (332)
T cd00825 67 VTKAMFPGASGQIATPLGI--HGPAYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMD-----------C- 132 (332)
T ss_pred hhcccchHHHHHHHHHhCC--CCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHH-----------H-
Confidence 023356789999999 6899999999999999999999999999999999999998765100 0
Q ss_pred hhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCC
Q 012506 187 EQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRP 266 (462)
Q Consensus 187 ~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~ 266 (462)
.+. ...+.. +|.. .
T Consensus 133 --------~~~-------~~~~~~------------------------------------~~~~------------~--- 146 (332)
T cd00825 133 --------EFD-------AMGALS------------------------------------TPEK------------A--- 146 (332)
T ss_pred --------HHH-------hhcccc------------------------------------CCCC------------C---
Confidence 000 000000 1110 0
Q ss_pred CCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCC-----CCccHHHHH
Q 012506 267 NTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAI-----MGVGPAVAI 341 (462)
Q Consensus 267 ~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~-----~~~~~~~Ai 341 (462)
.+| |+. ..++..++||++|+||++++.|++++.++++++.++......... .......++
T Consensus 147 ---------~~~-~~~-----~~~g~~~gdGaaA~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i 211 (332)
T cd00825 147 ---------SRT-FDA-----AADGFVFGDGAGALVVEELEHALARGAHIYAEIVGTAATIDGAGMGAFAPSAEGLARAA 211 (332)
T ss_pred ---------CCC-CCC-----CCCCEEEEeeEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCcCHHHHHHHH
Confidence 012 221 234556899999999999999999999999999998865332211 123456799
Q ss_pred HHHHHHcCCCCCCccEEEecCCCHHHHHHHHHHcCCCC---CCCCCCCCccccCCccchHHHHHHHHHHHHHHhc-----
Q 012506 342 PAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDP---EKINVNGGALAIGHPLGTTGARCVATLLHEMKRR----- 413 (462)
Q Consensus 342 ~~aL~~AGl~~~DID~~eihdafa~~~~~~~e~LGl~~---~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~----- 413 (462)
+++|+++|++++|||++++|+.+........+.+++.. ++++.......+||+.++++..++++++.+++.+
T Consensus 212 ~~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~~~~~~~~~~p~~ 291 (332)
T cd00825 212 KEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLMLEHGFIPPS 291 (332)
T ss_pred HHHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHHHHHHHhcCccCCC
Confidence 99999999999999999999998764332223333221 1344444556699999999999999999999987
Q ss_pred --------------------CCCCcEEEEEeecccceeEEEEE
Q 012506 414 --------------------GRDCRFGVISMCIGTGMGAAAVF 436 (462)
Q Consensus 414 --------------------~~~~~~gl~~~~~G~G~g~A~v~ 436 (462)
.+ ++.++..+..||...++||
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~G~Gg~~~~~vl 332 (332)
T cd00825 292 IHIEELDEAGLNIVTETTPREL--RTALLNGFGLGGTNATLVL 332 (332)
T ss_pred CCCCCCCcccCcccCCCCCCCC--CEEEEeeecCCCeeEEEeC
Confidence 34 7888887666665556553
|
Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). |
| >PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.8e-24 Score=226.78 Aligned_cols=274 Identities=19% Similarity=0.244 Sum_probs=194.8
Q ss_pred CHHHHHHHHHHHHHHHcCCCcc-----ccCcEEEEeccCCCCc-------------------------cccHHHHHHHHc
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPS-----EVGDIVVGTVLAPGSQ-------------------------RASECRMAAFYA 123 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~-----~Id~vivG~~~~~~~~-------------------------~~~~a~~~a~~~ 123 (462)
....|+..|+.+||+++|+++. +..++++|+..+.... ....+..++..+
T Consensus 92 ~~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~ 171 (437)
T PLN02836 92 RFIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRY 171 (437)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHh
Confidence 3567889999999999998642 3557888875432100 012355788899
Q ss_pred CCCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHH-H
Q 012506 124 GFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSE-N 202 (462)
Q Consensus 124 Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~-~ 202 (462)
|+ ++|.++|+++|+|++.||..|+++|++|++|++||+|+|.+... . ...+.... .
T Consensus 172 gl--~Gp~~tv~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~-~--------------------~~~~~~~~~~ 228 (437)
T PLN02836 172 GF--QGPNHAAVTACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDA-L--------------------SIAGFSRSRA 228 (437)
T ss_pred CC--CCceeceeChhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCH-H--------------------HHHHHHHhhh
Confidence 99 68999999999999999999999999999999999999975320 0 00000000 0
Q ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC
Q 012506 203 VAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK 282 (462)
Q Consensus 203 ~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p 282 (462)
+..+++. +|. + ..+| |+.
T Consensus 229 l~~~~~~-------------------------------------~p~------------~------------~~~p-fd~ 246 (437)
T PLN02836 229 LSTKFNS-------------------------------------CPT------------E------------ASRP-FDC 246 (437)
T ss_pred hhcccCC-------------------------------------Ccc------------c------------ccCC-ccc
Confidence 0000000 111 0 1223 332
Q ss_pred CCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEecc-----CCCCCCccHHHHHHHHHHHcCCCCCCccE
Q 012506 283 DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV-----DPAIMGVGPAVAIPAAVKSAGLQLDDIDL 357 (462)
Q Consensus 283 ~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~-----~p~~~~~~~~~Ai~~aL~~AGl~~~DID~ 357 (462)
..+...++|||+++||++++.|+++|.+++++|.|++.... .|...+.+...+++++|++|||+++|||+
T Consensus 247 -----~~~G~~~gEGaaalVLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~Agi~~~dId~ 321 (437)
T PLN02836 247 -----DRDGFVIGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMSGDAHHITQPHEDGRGAVLAMTRALQQSGLHPNQVDY 321 (437)
T ss_pred -----CCCCeeeecCEEEEEEeeHHHHHHCCCceEEEEEeeeecCCCCCCcCCCcchHHHHHHHHHHHHHcCCCHhHcCE
Confidence 12334479999999999999999999999999999988653 23333344567999999999999999999
Q ss_pred EEecCCCHHH----HHHHH-HHcCCC----CCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC-------------
Q 012506 358 FEINEAFASQ----FVYCR-NKLGLD----PEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR------------- 415 (462)
Q Consensus 358 ~eihdafa~~----~~~~~-e~LGl~----~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~------------- 415 (462)
+|.|++++.. +...+ +.+|-. ..+|+..+|. +||++||+|+.+++.++.+|+++.-
T Consensus 322 ve~hgtgt~~~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~--~GH~~~AsG~~~li~~~l~l~~~~ipp~~n~~~~~p~~ 399 (437)
T PLN02836 322 VNAHATSTPLGDAVEARAIKTVFSEHATSGGLAFSSTKGA--TGHLLGAAGAVEAIFSVLAIHHGIAPPTLNLERPDPIF 399 (437)
T ss_pred EEccCCcCcCcCHHHHHHHHHHhcccccCCCCeeECCccc--ccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCC
Confidence 9999999953 33333 334432 2356667665 6999999999999999999998620
Q ss_pred -------------CCcEEEEEeecccceeEEEEEEec
Q 012506 416 -------------DCRFGVISMCIGTGMGAAAVFERG 439 (462)
Q Consensus 416 -------------~~~~gl~~~~~G~G~g~A~v~~~~ 439 (462)
..+++|+.....||.+.++||++.
T Consensus 400 ~~~~~~~~~~~~~~~~~~l~nsfgfGG~na~lvl~~~ 436 (437)
T PLN02836 400 DDGFVPLTASKAMLIRAALSNSFGFGGTNASLLFTSP 436 (437)
T ss_pred CcccCcccCCCCCCccEEEEecccCCCeeEEEEEecC
Confidence 126778877777888889998764
|
|
| >PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.3e-24 Score=224.27 Aligned_cols=271 Identities=18% Similarity=0.277 Sum_probs=194.7
Q ss_pred HHHHHHHHHHHHHHcCCCccccC----cEEEEeccCCCC-----------c--------------cccHHHHHHHHcCCC
Q 012506 76 DDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS-----------Q--------------RASECRMAAFYAGFP 126 (462)
Q Consensus 76 ~eL~~~A~~~Al~~agl~~~~Id----~vivG~~~~~~~-----------~--------------~~~~a~~~a~~~Glp 126 (462)
..++..++.+||+++|+++...+ ++++|+..+... . ....+..++..+|+
T Consensus 75 ~~~~l~a~~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~gl- 153 (414)
T PRK08722 75 IQYGIAAGIQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGL- 153 (414)
T ss_pred HHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhCC-
Confidence 45788899999999999765544 577887543210 0 01256778889999
Q ss_pred CCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHH
Q 012506 127 ETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHR 206 (462)
Q Consensus 127 ~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~ 206 (462)
++|.++++++|+|+++||..|+++|++|++|++||+|+|..... . ...+.
T Consensus 154 -~Gp~~ti~~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~-~--------------------~~~~f-------- 203 (414)
T PRK08722 154 -RGPNIAISTACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTP-L--------------------GMAGF-------- 203 (414)
T ss_pred -CCCccccccccHHHHHHHHHHHHHHHcCCCCEEEEecccccCCH-H--------------------HHHHH--------
Confidence 68999999999999999999999999999999999999986441 0 00000
Q ss_pred hCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC--CC
Q 012506 207 FGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK--DG 284 (462)
Q Consensus 207 ~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p--~g 284 (462)
.. . +.+. + +..+| ++ ..+| |+. +|
T Consensus 204 ----------------~~-~-----~~ls----~---~~~~p------------~~------------~~rp-fd~~~~G 229 (414)
T PRK08722 204 ----------------GA-A-----KALS----T---RNDEP------------QK------------ASRP-WDKDRDG 229 (414)
T ss_pred ----------------HH-c-----CCcc----c---CCCCC------------cc------------ccCc-CcCCCCc
Confidence 00 0 0000 0 00011 11 1244 543 44
Q ss_pred CcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEecc-----CCCCCCccHHHHHHHHHHHcCCCCCCccEEE
Q 012506 285 TTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV-----DPAIMGVGPAVAIPAAVKSAGLQLDDIDLFE 359 (462)
Q Consensus 285 ~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~-----~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~e 359 (462)
++ ++||++++||++++.|+++|.+++++|.|++..+. .|+..+.+...+++++|+++||+++||||+|
T Consensus 230 ~~-------~gEGaaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~agi~~~did~ie 302 (414)
T PRK08722 230 FV-------LGDGAGMMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQIGYVN 302 (414)
T ss_pred eE-------eeceEEEEEEccHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCcchHHHHHHHHHHHHHcCCCHHHcCEEE
Confidence 44 89999999999999999999999999999998653 3444444567899999999999999999999
Q ss_pred ecCCCHH----HHHHHHH-HcCCC-CCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC------------------
Q 012506 360 INEAFAS----QFVYCRN-KLGLD-PEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR------------------ 415 (462)
Q Consensus 360 ihdafa~----~~~~~~e-~LGl~-~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~------------------ 415 (462)
.|++++. .|...++ .+|-. .+++.++.-+-.+||+++|+|+.+++.++..|+++.-
T Consensus 303 ~hgtgt~~~D~~E~~al~~~fg~~~~~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ipp~~n~~~~~~~~~~~~v 382 (414)
T PRK08722 303 AHGTSTPAGDVAEIKGIKRALGEAGSKQVLVSSTKSMTGHLLGAAGSVEAIITVMSLVDQIVPPTINLDDPEEGLDIDLV 382 (414)
T ss_pred ccCccCCCCCHHHHHHHHHHhcccCCCCceeeCcccccccchHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccC
Confidence 9999985 3444443 45532 2333333334449999999999999999999997520
Q ss_pred --------CCcEEEEEeecccceeEEEEEEe
Q 012506 416 --------DCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 416 --------~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
+.++.++.....||.+.++||++
T Consensus 383 ~~~~~~~~~~~~~l~nsfGfGG~n~~lvl~~ 413 (414)
T PRK08722 383 PHTARKVESMEYAICNSFGFGGTNGSLIFKK 413 (414)
T ss_pred CCccccCCCCCEEEEecccCCCceEEEEEec
Confidence 13677777777777888888865
|
|
| >KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.2e-25 Score=216.96 Aligned_cols=246 Identities=23% Similarity=0.359 Sum_probs=187.3
Q ss_pred CHHHHHHHHHHHHHHHcCCCcc---ccC----cEEEEeccCCCCc-----------c--------------ccHHHHHHH
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPS---EVG----DIVVGTVLAPGSQ-----------R--------------ASECRMAAF 121 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~---~Id----~vivG~~~~~~~~-----------~--------------~~~a~~~a~ 121 (462)
++..|+..|.++||+++++.+. +.| +|.+|+-+++... + ...+.+++.
T Consensus 93 ~~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm 172 (440)
T KOG1394|consen 93 KFTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSM 172 (440)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhhh
Confidence 3456889999999999998664 333 5777766555310 0 123567888
Q ss_pred HcCCCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHH
Q 012506 122 YAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSE 201 (462)
Q Consensus 122 ~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~ 201 (462)
.+|+ .+|.+.+.++|++|..+|..+++.|+.|.+|++|++|.|+--. |.++.
T Consensus 173 ~~gl--~GpnhsvSTACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~------------------------Plsla-- 224 (440)
T KOG1394|consen 173 KYGL--RGPNHSVSTACATGNHCIGDAFNFIRLGDADVMLAGGSEACIN------------------------PLSLA-- 224 (440)
T ss_pred hhcC--cCCchhhHhhhhhccchHHHHHHHHHhCccceeeccCcceeec------------------------chhhh--
Confidence 9999 7899999999999999999999999999999999999998422 22110
Q ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCccc
Q 012506 202 NVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFK 281 (462)
Q Consensus 202 ~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~ 281 (462)
| .++.+|.. ++-+||+. .+|| ||
T Consensus 225 ------G-----------F~r~RALS---------------t~nd~P~~------------------------aSRP-fD 247 (440)
T KOG1394|consen 225 ------G-----------FSRARALS---------------TRNDNPQK------------------------ASRP-FD 247 (440)
T ss_pred ------h-----------HHHHHHhh---------------hcCCCccc------------------------cCCC-Cc
Confidence 0 11122211 11124542 2456 66
Q ss_pred C--CCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEec-----cCCCCCCccHHHHHHHHHHHcCCCCCC
Q 012506 282 K--DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDD 354 (462)
Q Consensus 282 p--~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~-----~~p~~~~~~~~~Ai~~aL~~AGl~~~D 354 (462)
+ +|++ ++||++.+||++.|+|+++|.+|+++++||+.++ ..|+..+.+...+|+++|++|||+|+|
T Consensus 248 ~~RdGFV-------mGEGagvlvlEelEHA~~RgA~I~AE~lGygls~Da~HiT~P~~dG~Ga~~am~raL~~Agl~pe~ 320 (440)
T KOG1394|consen 248 KKRDGFV-------MGEGAGVLVLEELEHAKKRGAPIYAEVLGYGLSSDAYHITSPDPDGAGAVLAMERALKDAGLSPED 320 (440)
T ss_pred cCCCcee-------eccceeEEehHhHHHHHHcCCceeHHhhcCcccccccccCCCCCCcchHHHHHHHHHHHcCCChhh
Confidence 5 6776 8999999999999999999999999999999876 578888999999999999999999999
Q ss_pred ccEEEecCCCHHH----HHHHHH-HcCCCCC--CCCCCCCccccCCccchHHHHHHHHHHHHHHhc
Q 012506 355 IDLFEINEAFASQ----FVYCRN-KLGLDPE--KINVNGGALAIGHPLGTTGARCVATLLHEMKRR 413 (462)
Q Consensus 355 ID~~eihdafa~~----~~~~~e-~LGl~~~--~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~ 413 (462)
|||++.|...+.. +..++. .|+-... +||.+.|+ +||-+||.|+.+.+..+..++..
T Consensus 321 i~YvNAHATST~~GD~aE~~Ai~~vf~~~~~~~~vsStKga--iGHLLGAAGavEAi~Tv~ai~~~ 384 (440)
T KOG1394|consen 321 IDYVNAHATSTPLGDAAEAEAIKRVFGEHNIASKVSSTKGA--IGHLLGAAGAVEAIFTVLAINDG 384 (440)
T ss_pred cCeeecccccCcCchHHHHHHHHHHhccCCcccccccccch--hhhhcccccchhhHhhhhhhhcC
Confidence 9999999988854 333333 3443322 57877776 79999999999988888887764
|
|
| >COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.2e-24 Score=217.11 Aligned_cols=274 Identities=23% Similarity=0.309 Sum_probs=202.0
Q ss_pred CCHHHHHHHHHHHHHHHcCCC-ccccC---cEEEEeccCCCCc-----------c---------------ccHHHHHHHH
Q 012506 73 TYPDDLLAPVLKAVIEKTNVD-PSEVG---DIVVGTVLAPGSQ-----------R---------------ASECRMAAFY 122 (462)
Q Consensus 73 ~~~~eL~~~A~~~Al~~agl~-~~~Id---~vivG~~~~~~~~-----------~---------------~~~a~~~a~~ 122 (462)
.....|+..|+++||+++|++ ..+.+ ++++|+..+.... + ...+..++..
T Consensus 69 d~~~~~a~~Aa~eAl~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~ 148 (412)
T COG0304 69 DRFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIV 148 (412)
T ss_pred cHHHHHHHHHHHHHHHHcCCCcccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHHHH
Confidence 366889999999999999997 34443 3555654443220 0 1236678889
Q ss_pred cCCCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecC-CCCCCCCCCCCCChhhhhhhhhhcccccHHHHHH
Q 012506 123 AGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLES-MTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSE 201 (462)
Q Consensus 123 ~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~-ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~ 201 (462)
+|+ ..|.+++.++|+|+.+||..|+++|+.|++|++|++|+|. .+.
T Consensus 149 ~g~--~G~~~~~~tACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~~------------------------------- 195 (412)
T COG0304 149 FGL--KGPNYTPVTACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITP------------------------------- 195 (412)
T ss_pred hCC--CCCcCChhhhHHhHHHHHHHHHHHHHcCCCCEEEEcccccccCH-------------------------------
Confidence 999 6899999999999999999999999999999999999988 322
Q ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCccc
Q 012506 202 NVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFK 281 (462)
Q Consensus 202 ~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~ 281 (462)
+.+..|.. -+|.. .. . ++|+. .+|| |+
T Consensus 196 ----------~~i~gF~a---m~Als---t~--n----------d~p~~------------------------asrP-fd 222 (412)
T COG0304 196 ----------LGIAGFEA---MRALS---TR--N----------DDPEK------------------------ASRP-FD 222 (412)
T ss_pred ----------HHHHHHHH---HHHhc---cC--C----------CCccc------------------------cCCC-CC
Confidence 00111110 00000 00 0 02221 2345 54
Q ss_pred C--CCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEec-----cCCCCCCccHHHHHHHHHHHcCCCCCC
Q 012506 282 K--DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDD 354 (462)
Q Consensus 282 p--~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~-----~~p~~~~~~~~~Ai~~aL~~AGl~~~D 354 (462)
. +|++ +++|++++||++.|+|+++|.+++++|+|++... ..|...+.+..++++.+|+++||+++|
T Consensus 223 ~~RdGfv-------~gEGag~lVLE~~ehA~aRGA~Iyaei~G~g~~~Da~h~t~P~p~g~Ga~~am~~AL~~Agl~~~~ 295 (412)
T COG0304 223 KNRDGFV-------IGEGAGALVLEELEHALARGAKIYAEIVGYGTTSDAYHITAPAPDGEGAIRAMRAALADAGLTPED 295 (412)
T ss_pred CCCCCEE-------EecceeEEEecChhhHHhCCCceEEEEEEEEecccccccCCCCCCCchHHHHHHHHHHHcCCCHhH
Confidence 4 6766 8999999999999999999999999999999875 467777889999999999999999999
Q ss_pred ccEEEecCCCHH----HHHHHHHH-cCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC--------------
Q 012506 355 IDLFEINEAFAS----QFVYCRNK-LGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR-------------- 415 (462)
Q Consensus 355 ID~~eihdafa~----~~~~~~e~-LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~-------------- 415 (462)
|||+..|...+. .+...++. +|-...++.++.-+..+||++||+|+.+.+-.+..|+...-
T Consensus 296 idYinaHgTsT~~nD~~E~~ai~~vfg~~~~~~~vsstKs~tGH~lGAaGaveai~~~l~l~~g~ippt~n~~~~dp~~~ 375 (412)
T COG0304 296 IDYINAHGTSTPANDKAESLAIKRVFGEHAKSLPVSSTKSLTGHTLGAAGAVEAIISLLALRDGIIPPTINLDNPDPEAA 375 (412)
T ss_pred CCEEeCCCccCCCccHHHHHHHHHHhcccccCceeeecccccccChhhHHHHHHHHHHHHHhcCCcCCCCCcCCCCcccc
Confidence 999999987773 46666664 46444444555556669999999999999999999995410
Q ss_pred ------------CCcEEEEEeecccceeEEEEEEec
Q 012506 416 ------------DCRFGVISMCIGTGMGAAAVFERG 439 (462)
Q Consensus 416 ------------~~~~gl~~~~~G~G~g~A~v~~~~ 439 (462)
..+++|....+.||.+.+++|.+.
T Consensus 376 ~l~~v~~~~~~~~~~~~lsnsfGFGG~Na~lv~~~~ 411 (412)
T COG0304 376 DLDVVPNEARTGAVRAALSNSFGFGGTNASLVFKRY 411 (412)
T ss_pred cccccCCcccccceeEEEecccccCCcceEEEEecC
Confidence 125666666666667778888765
|
|
| >smart00825 PKS_KS Beta-ketoacyl synthase | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.6e-24 Score=226.41 Aligned_cols=269 Identities=22% Similarity=0.287 Sum_probs=190.5
Q ss_pred HHHHHHHHHHHHHHHcCCCccccC----cEEEEeccCCCC------------------ccccHHHHHHHHcCCCCCcceE
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS------------------QRASECRMAAFYAGFPETVPVR 132 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id----~vivG~~~~~~~------------------~~~~~a~~~a~~~Glp~~~p~~ 132 (462)
...|+.+++++||+++|+++++|| .+++|+...+.. .....+..++..+|+ +.|.+
T Consensus 87 ~~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl--~g~~~ 164 (424)
T smart00825 87 QQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDL--RGPSV 164 (424)
T ss_pred HHHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCC--CCCcc
Confidence 345899999999999999999999 788887543221 012345678889999 57999
Q ss_pred EecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHH
Q 012506 133 TVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRK 212 (462)
Q Consensus 133 ~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre 212 (462)
+++.+|+|+++||..|+++|++|++|++||+|+|.+..... ..+.
T Consensus 165 ~v~~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~---------------------~~~~-------------- 209 (424)
T smart00825 165 TVDTACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDT---------------------FVGF-------------- 209 (424)
T ss_pred ccccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCCHHH---------------------HHHH--------------
Confidence 99999999999999999999999999999999998643100 0000
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCC
Q 012506 213 EQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSS 292 (462)
Q Consensus 213 ~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s 292 (462)
.. .+.. ++++. .+| |+. ..+..
T Consensus 210 ----------~~------~~~l------------------------~~~~~------------~~p-f~~-----~~~g~ 231 (424)
T smart00825 210 ----------SR------AGML------------------------SPDGR------------CKT-FDA-----DADGY 231 (424)
T ss_pred ----------hh------cCCC------------------------CCCCC------------CCC-CCC-----CCCcc
Confidence 00 0000 00111 122 322 11333
Q ss_pred CcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCC-----CCccHHHHHHHHHHHcCCCCCCccEEEecCCCHH-
Q 012506 293 QVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAI-----MGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFAS- 366 (462)
Q Consensus 293 ~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~-----~~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~- 366 (462)
.++|||+++||++++.|++++.+++++|.|++........ .+.+...+++++|+++||+++|||+++.|++++.
T Consensus 232 ~~geGAaalVLe~~e~A~~~g~~i~a~I~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~dId~i~~h~tgt~~ 311 (424)
T smart00825 232 VRGEGVGVVVLKRLSDALRDGDPILAVIRGSAVNQDGRSNGLTAPSGPAQARLIRQALARAGVDPADVDYVEAHGTGTPL 311 (424)
T ss_pred cccceEEEEEEccHHHHHHCCCeEEEEEEEEEEeCCCCCCCCCCcCHHHHHHHHHHHHHHhCCCHHHccEEEeeCCCCCC
Confidence 4799999999999999999999999999999876432211 1223467999999999999999999999988774
Q ss_pred ---HHHHHH-HHcCCCC---CCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC------------------------
Q 012506 367 ---QFVYCR-NKLGLDP---EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR------------------------ 415 (462)
Q Consensus 367 ---~~~~~~-e~LGl~~---~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~------------------------ 415 (462)
.+...+ +.+|... .++.+++-+..+||+++|+|+.+++.++.+|+.+.-
T Consensus 312 ~d~~E~~al~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~ 391 (424)
T smart00825 312 GDPIEAEALAAVFGQGRPRDGPLLLGSVKSNIGHLEAAAGVAGLIKVVLALRHGTIPPTLHFETPNPHIDLEESPLRVPT 391 (424)
T ss_pred CCHHHHHHHHHHHhccCCCCCceEEeccccccCCcccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcccCceEccC
Confidence 233233 4455432 233333333337999999999999999999997520
Q ss_pred ---------CCcEEEEEeecccceeEEEEEEe
Q 012506 416 ---------DCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 416 ---------~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
+.++.++..+..||.+.++||+.
T Consensus 392 ~~~~~~~~~~~~~~l~~s~gfgg~n~~lvl~~ 423 (424)
T smart00825 392 EATPWPATGRPRRAGVSSFGFGGTNAHVILEE 423 (424)
T ss_pred CCcCCCCCCCccEEEEeccCCCCceEEEEEec
Confidence 13566777666677778887764
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. |
| >cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-23 Score=217.95 Aligned_cols=273 Identities=23% Similarity=0.318 Sum_probs=194.6
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCc----EEEEeccCCC-------------------------CccccHHHHHHHHcC
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPSEVGD----IVVGTVLAPG-------------------------SQRASECRMAAFYAG 124 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~~Id~----vivG~~~~~~-------------------------~~~~~~a~~~a~~~G 124 (462)
...+|+.+++++||+++|++++++|. +++|+..+.. ......+..++..+|
T Consensus 70 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 149 (406)
T cd00834 70 RFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLG 149 (406)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHhC
Confidence 45789999999999999999988875 6666543321 001235678899999
Q ss_pred CCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHH
Q 012506 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVA 204 (462)
Q Consensus 125 lp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~ 204 (462)
+ +.|.++++.+|+|+++||..|+++|++|++|.+||+|+|.++.. +.+..
T Consensus 150 l--~g~~~~v~~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~p------------------------~~~~~---- 199 (406)
T cd00834 150 L--RGPNYTVSTACASGAHAIGDAARLIRLGRADVVIAGGAEALITP------------------------LTLAG---- 199 (406)
T ss_pred C--CCcccccchHHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccCH------------------------HHHHH----
Confidence 9 57999999999999999999999999999999999999987531 00000
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCC
Q 012506 205 HRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDG 284 (462)
Q Consensus 205 ~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g 284 (462)
+... +.+... ..+| +.. .+| |+.
T Consensus 200 -----------------~~~~------~~l~~~-------~~~p------------~~~------------~~p-f~~-- 222 (406)
T cd00834 200 -----------------FAAL------RALSTR-------NDDP------------EKA------------SRP-FDK-- 222 (406)
T ss_pred -----------------HHhc------CCcCCC-------CCCC------------ccC------------CCC-CCC--
Confidence 0000 000000 0000 001 122 322
Q ss_pred CcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEecc-----CCCCCCccHHHHHHHHHHHcCCCCCCccEEE
Q 012506 285 TTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV-----DPAIMGVGPAVAIPAAVKSAGLQLDDIDLFE 359 (462)
Q Consensus 285 ~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~-----~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~e 359 (462)
..+...++|||+++||++.+.|++++.+++++|.|++.... .|...+.+...+++++|+++|++++|||+++
T Consensus 223 ---~~~g~~~geGA~a~vL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~agi~~~dId~v~ 299 (406)
T cd00834 223 ---DRDGFVLGEGAGVLVLESLEHAKARGAKIYAEILGYGASSDAYHITAPDPDGEGAARAMRAALADAGLSPEDIDYIN 299 (406)
T ss_pred ---CCCCEeeeccEEEEEEecHHHHHHCCCeEEEEEEEEEecccCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEe
Confidence 11223479999999999999999999999999999987642 2333345667899999999999999999999
Q ss_pred ecCCCHHH----HHHHHH-HcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC-------------------
Q 012506 360 INEAFASQ----FVYCRN-KLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR------------------- 415 (462)
Q Consensus 360 ihdafa~~----~~~~~e-~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~------------------- 415 (462)
.|.+.+.. +...++ .++-.+++++++..+..+||+++|+|+.+++.++++|+++.-
T Consensus 300 ~h~tgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~ 379 (406)
T cd00834 300 AHGTSTPLNDAAESKAIKRVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATLLALRDGVLPPTINLEEPDPECDLDYVP 379 (406)
T ss_pred cccccCccccHHHHHHHHHHhcccCCCCceeCcchhhccchhhhhHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccC
Confidence 99988742 343333 345433455655556668999999999999999999997620
Q ss_pred ------CCcEEEEEeecccceeEEEEE
Q 012506 416 ------DCRFGVISMCIGTGMGAAAVF 436 (462)
Q Consensus 416 ------~~~~gl~~~~~G~G~g~A~v~ 436 (462)
..++++++..+.||.+.++||
T Consensus 380 ~~~~~~~~~~~l~~s~g~gG~n~~~vl 406 (406)
T cd00834 380 NEAREAPIRYALSNSFGFGGHNASLVF 406 (406)
T ss_pred CCCccccccEEEEeeecCCceeeEEEC
Confidence 136778877677777777764
|
KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. |
| >PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II | Back alignment and domain information |
|---|
Probab=99.92 E-value=2e-23 Score=222.23 Aligned_cols=269 Identities=19% Similarity=0.296 Sum_probs=193.0
Q ss_pred HHHHHHHHHHHHHcCCCcc---ccC----cEEEEeccCCCC------------------------ccccHHHHHHHHcCC
Q 012506 77 DLLAPVLKAVIEKTNVDPS---EVG----DIVVGTVLAPGS------------------------QRASECRMAAFYAGF 125 (462)
Q Consensus 77 eL~~~A~~~Al~~agl~~~---~Id----~vivG~~~~~~~------------------------~~~~~a~~~a~~~Gl 125 (462)
.++..++++||+++|++++ .++ +|++|+..+... .....+..++..+|+
T Consensus 201 ~~al~Aa~eAL~dAGl~~~~~~~~~~~r~GV~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~~gl 280 (540)
T PLN02787 201 LYLLTAGKKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMDLGW 280 (540)
T ss_pred HHHHHHHHHHHHHcCCCcccccccCCCceEEEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHHHhCC
Confidence 4677899999999999764 232 588887643210 001134567888999
Q ss_pred CCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHH
Q 012506 126 PETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAH 205 (462)
Q Consensus 126 p~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~ 205 (462)
.+|.++++++|+|+++||..|+++|++|++|++||+|+|.... ++.+
T Consensus 281 --~Gp~~tistACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~------------------------p~~~------- 327 (540)
T PLN02787 281 --MGPNYSISTACATSNFCILNAANHIIRGEADVMLCGGSDAAII------------------------PIGL------- 327 (540)
T ss_pred --CCCccccccccccHHHHHHHHHHHHHcCCCCEEEEeccccccC------------------------HHHH-------
Confidence 6899999999999999999999999999999999999997432 0000
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC--C
Q 012506 206 RFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK--D 283 (462)
Q Consensus 206 ~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p--~ 283 (462)
..|.. .++.. ++ ..+| ++ ..+| ||. +
T Consensus 328 ---------~~f~~---~~aLS-~~--------------~~~p------------~~------------~~rP-FD~~rd 355 (540)
T PLN02787 328 ---------GGFVA---CRALS-QR--------------NDDP------------TK------------ASRP-WDMNRD 355 (540)
T ss_pred ---------HHHHH---HHHhh-cc--------------CCCc------------cc------------ccCC-cccCCC
Confidence 00000 00000 00 0011 11 1344 654 4
Q ss_pred CCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEecc-----CCCCCCccHHHHHHHHHHHcCCCCCCccEE
Q 012506 284 GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV-----DPAIMGVGPAVAIPAAVKSAGLQLDDIDLF 358 (462)
Q Consensus 284 g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~-----~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~ 358 (462)
|++ ++||++++||++.+.|+++|.+|+++|.|++.... .|+..+.+...+++++|+++||+++||||+
T Consensus 356 Gfv-------~GEGAa~lVLE~~e~A~~rGa~IyA~I~G~g~s~Da~~~t~p~p~g~g~~~am~~AL~~AGl~p~dIdyI 428 (540)
T PLN02787 356 GFV-------MGEGAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEPHPEGAGVILCIEKALAQSGVSKEDVNYI 428 (540)
T ss_pred Ccc-------cccceEEEEEeeHHHHHHCCCeeEEEEEEEEEecCCCCCCCCCcCHHHHHHHHHHHHHHcCCCHHHCcEE
Confidence 555 89999999999999999999999999999988652 344445566789999999999999999999
Q ss_pred EecCCCHH----HHHHHHH-HcCCCC-CCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC-----------------
Q 012506 359 EINEAFAS----QFVYCRN-KLGLDP-EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR----------------- 415 (462)
Q Consensus 359 eihdafa~----~~~~~~e-~LGl~~-~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~----------------- 415 (462)
+.|.+.+. .|...++ .+|-.+ -+|+...+. +||++||+|+.+++.++..|+...-
T Consensus 429 naHGTGT~~gD~~E~~Ai~~~Fg~~~~~pV~S~Ks~--iGH~~gAAGa~eli~~~lal~~g~iPPt~n~~~pd~~~~~~~ 506 (540)
T PLN02787 429 NAHATSTKAGDLKEYQALMRCFGQNPELRVNSTKSM--IGHLLGAAGAVEAIATVQAIRTGWVHPNINLENPESGVDTKV 506 (540)
T ss_pred EccCccCCCCCHHHHHHHHHHhCCCCCceeeCCCCC--cCCCcccchHHHHHHHHHHHhcCCcCCCCCCCCCCccCCccc
Confidence 99988774 3554444 456332 245544444 9999999999999999999986420
Q ss_pred ---------CCcEEEEEeecccceeEEEEEEec
Q 012506 416 ---------DCRFGVISMCIGTGMGAAAVFERG 439 (462)
Q Consensus 416 ---------~~~~gl~~~~~G~G~g~A~v~~~~ 439 (462)
+.+++|......||.+.++||+..
T Consensus 507 ~v~~~~~~~~ir~aL~nSfGFGG~Naslvl~~~ 539 (540)
T PLN02787 507 LVGPKKERLDIKVALSNSFGFGGHNSSILFAPY 539 (540)
T ss_pred ccccccccCCcCEEEEeeecCCceeEEEEEEeC
Confidence 136778887778888889998763
|
|
| >COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=99.92 E-value=4e-24 Score=212.54 Aligned_cols=264 Identities=22% Similarity=0.242 Sum_probs=192.9
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
++-.|. .||.+..+ +=+-.+.+..+|+.+|+++||+++|++++|||.||+.+.+++.. .|..+..++..+|+. ++
T Consensus 30 sdewI~--~rtGir~R-~~a~~~e~~s~la~~Aa~~AL~~Agi~~~dIDlII~aT~tpd~~-~Ps~A~~vq~~LG~~-~~ 104 (323)
T COG0332 30 SDEWIE--TRTGIRER-RIAADDETTSDLAVEAARKALEDAGISPDDIDLIIVATSTPDHL-FPSTACLVQARLGLG-GA 104 (323)
T ss_pred Ccceee--eecCCcee-eecCCCccHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCcccC-CChHHHHHHHHhCCC-Cc
Confidence 445555 45666542 22335889999999999999999999999999999999999987 788999999999994 69
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCC
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGV 209 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gi 209 (462)
++++++.+|+++++||..|..+|++|.++.+||+|.|.+|+...
T Consensus 105 ~afDl~aaCsgf~yaL~~A~~~i~sG~~k~vLVVg~e~~S~~ld------------------------------------ 148 (323)
T COG0332 105 PAFDLQAACSGFLYALSVADGLIRSGGYKNVLVVGAETLSRILD------------------------------------ 148 (323)
T ss_pred ceeechhhhHHHHHHHHHHHHHHHcCCCCEEEEEehhHhhccCC------------------------------------
Confidence 99999999999999999999999999999999999999987210
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccC
Q 012506 210 TRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAG 289 (462)
Q Consensus 210 sre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~ 289 (462)
+.. +.
T Consensus 149 --------------------------------------~~d-------------------------------------R~ 153 (323)
T COG0332 149 --------------------------------------WTD-------------------------------------RD 153 (323)
T ss_pred --------------------------------------Hhh-------------------------------------cc
Confidence 000 00
Q ss_pred CCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEec-----------cCC---C----CCC---------ccHHHHHH
Q 012506 290 NSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG-----------VDP---A----IMG---------VGPAVAIP 342 (462)
Q Consensus 290 ~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~-----------~~p---~----~~~---------~~~~~Ai~ 342 (462)
.|-..+|||+||||...+ .+.+.-- ..+.+-+..+ ..+ . .|. .....+++
T Consensus 154 t~vlFgDGAgAvvl~~~~--~~~~i~~-~~l~sdg~~~~~l~~~~~~~~~~~~~~~~~~~~m~Gr~vfk~av~~~~~~~~ 230 (323)
T COG0332 154 TCVLFGDGAGAVVLEATE--DDNGILD-TDLGSDGSQGDLLYLPGGGSATPKEESGGGLLVMDGREVFKFAVRAMPKAIE 230 (323)
T ss_pred ceEEEcCCceEEEEecCC--CCcCeee-eeeeccccCCCeeeccCCCCccccccccccceeeccHHHHHHHHHHHHHHHH
Confidence 111258999999998876 2222100 0111111000 000 0 011 01246888
Q ss_pred HHHHHcCCCCCCccEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEE
Q 012506 343 AAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVI 422 (462)
Q Consensus 343 ~aL~~AGl~~~DID~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~ 422 (462)
++|+++||+++|||+|-+|+++..+.....++||++++++..+-- -+||+..||-...+.+++++-+=+.+ .+.|+
T Consensus 231 ~~L~~~~l~~~dId~~vpHQan~ri~~~i~~~l~~~~~k~~~~~~--~yGNtsaAsiplaL~~~~~~g~ik~G--d~ill 306 (323)
T COG0332 231 EVLEKAGLTPEDIDWFVPHQANLRIIEAIAKKLGIPEEKVVVTVD--KYGNTSAASIPLALDEALREGRIKPG--DLVLL 306 (323)
T ss_pred HHHHHcCCCHHHCCEEccccccHHHHHHHHHHcCCCHHHHhhHHH--HhcccccchHHHHHHHHhhhCCCCCC--CEEEE
Confidence 999999999999999999999999999999999999988777532 37787777766666666655554445 56666
Q ss_pred EeecccceeEEEEEE
Q 012506 423 SMCIGTGMGAAAVFE 437 (462)
Q Consensus 423 ~~~~G~G~g~A~v~~ 437 (462)
.. .|+|+....++.
T Consensus 307 ~~-fG~Gltwg~~~~ 320 (323)
T COG0332 307 EA-FGGGLTWGAALV 320 (323)
T ss_pred Ee-ecCcceeeeEEE
Confidence 54 677766655444
|
|
| >PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-23 Score=218.90 Aligned_cols=274 Identities=20% Similarity=0.193 Sum_probs=191.5
Q ss_pred HHHHHHHHHHHHHHHcCCCccccC--cEEEEeccCC-------------CC-----------ccccHHHHHHHHcCCCCC
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVG--DIVVGTVLAP-------------GS-----------QRASECRMAAFYAGFPET 128 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id--~vivG~~~~~-------------~~-----------~~~~~a~~~a~~~Glp~~ 128 (462)
...|+..++++||+++|+++.+.+ ++++|+.... .. .....+..++..+|+ +
T Consensus 80 ~~~lal~Aa~eAl~dAgl~~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl--~ 157 (410)
T PRK07103 80 SAQAALAAAREAWRDAALGPVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGI--R 157 (410)
T ss_pred HHHHHHHHHHHHHHhcCcCCCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCC--C
Confidence 567999999999999999643333 3555543211 00 001245667889999 5
Q ss_pred cceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhC
Q 012506 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFG 208 (462)
Q Consensus 129 ~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g 208 (462)
+|.+++.++|+|++.||..|+++|++|++|++||+|+|.... + . ...++.. .+
T Consensus 158 G~~~tv~~acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~-~---------~-----------~~~~~~~------~~ 210 (410)
T PRK07103 158 GEGFTVGGASASGQLAVIQAARLVQSGSVDACIAVGALMDLS-Y---------W-----------ECQALRS------LG 210 (410)
T ss_pred CCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccccCC-H---------H-----------HHHHHHH------cc
Confidence 799999999999999999999999999999999999975321 0 0 0000000 00
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCccc
Q 012506 209 VTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTA 288 (462)
Q Consensus 209 isre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~ 288 (462)
+.. ...| ..+|.. ..+| |+. .
T Consensus 211 ----------------~l~---~~~~----------~~~p~~------------------------~~rP-fd~-----~ 231 (410)
T PRK07103 211 ----------------AMG---SDRF----------ADEPEA------------------------ACRP-FDQ-----D 231 (410)
T ss_pred ----------------ccc---cCcc----------CCCccc------------------------CcCC-CCC-----C
Confidence 000 0000 002221 1234 543 1
Q ss_pred CCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCC---CCCCccHHHHHHHHHHHcCCCCCCccEEEecCCCH
Q 012506 289 GNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDP---AIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFA 365 (462)
Q Consensus 289 ~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p---~~~~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa 365 (462)
.+...++||++++||++++.|+++|.+++++|.|++.....- .....+...+++++|+++||+++|||+++.|.+++
T Consensus 232 ~dG~v~gEGaaalvLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~a~~~Al~~Agi~~~dId~v~~hgtgt 311 (410)
T PRK07103 232 RDGFIYGEACGAVVLESAESARRRGARPYAKLLGWSMRLDANRGPDPSLEGEMRVIRAALRRAGLGPEDIDYVNPHGTGS 311 (410)
T ss_pred CCCeeEeeeEEEEEEccHHHHHHCCCceEEEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEccCCCC
Confidence 334458999999999999999999999999999999864311 11223446799999999999999999999999999
Q ss_pred H----HHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcC------------------------CCC
Q 012506 366 S----QFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG------------------------RDC 417 (462)
Q Consensus 366 ~----~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~------------------------~~~ 417 (462)
. .+...+...+..+.+|+..++. +||+.+|+|+.+++.++++|++.. .+.
T Consensus 312 ~~~D~~E~~al~~~~~~~~~v~s~k~~--~Gh~~~AsG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~v~~~~~~~~~ 389 (410)
T PRK07103 312 PLGDETELAALFASGLAHAWINATKSL--TGHGLSAAGIVELIATLLQMRAGFLHPSRNLDEPIDERFRWVGSTAESARI 389 (410)
T ss_pred CCCCHHHHHHHhcCCCCCCeEECCCcc--cccCchhhhHHHHHHHHHHHhCCeeCCCCCCCCCCCCCcCccCCCCcCCCC
Confidence 6 3444443334344567777777 699999999999999999999752 013
Q ss_pred cEEEEEeecccceeEEEEEEe
Q 012506 418 RFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 418 ~~gl~~~~~G~G~g~A~v~~~ 438 (462)
++.++..+..||...++||++
T Consensus 390 ~~~l~~s~gfGG~n~~~vl~~ 410 (410)
T PRK07103 390 RYALSLSFGFGGINTALVLER 410 (410)
T ss_pred CEEEEecccCCCceEEEEEeC
Confidence 788888877788888888864
|
|
| >PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.6e-23 Score=213.06 Aligned_cols=270 Identities=22% Similarity=0.257 Sum_probs=192.5
Q ss_pred HHHHHHHHHHHHHHcCCCccccC--cEEEEeccCCCC-----------cc--------------ccHHHHHHHHcCCCCC
Q 012506 76 DDLLAPVLKAVIEKTNVDPSEVG--DIVVGTVLAPGS-----------QR--------------ASECRMAAFYAGFPET 128 (462)
Q Consensus 76 ~eL~~~A~~~Al~~agl~~~~Id--~vivG~~~~~~~-----------~~--------------~~~a~~~a~~~Glp~~ 128 (462)
..|+..++++||+++|++..+-+ ++++|+..+... .+ ...+..++..+|+ .
T Consensus 84 ~~~~l~aa~~AledAg~~~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~--~ 161 (418)
T PRK07910 84 QRMSTVLGRRVWENAGSPEVDTNRLMVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHA--K 161 (418)
T ss_pred HHHHHHHHHHHHHHcCCCCCCcccEEEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCC--C
Confidence 45778899999999997432212 466776543221 00 1135567778888 6
Q ss_pred cceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhC
Q 012506 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFG 208 (462)
Q Consensus 129 ~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g 208 (462)
+|.+++.++|+|++.||..|++.|++|++|++||+|+|....... ..+. .+.|
T Consensus 162 G~~~ti~taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~~~~---------------------~~~f------~~~~ 214 (418)
T PRK07910 162 AGVITPVSACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVP---------------------IAGF------AQMR 214 (418)
T ss_pred CCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHH---------------------HHHH------HhcC
Confidence 899999999999999999999999999999999999998643100 0000 0000
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC--CCCc
Q 012506 209 VTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK--DGTT 286 (462)
Q Consensus 209 isre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p--~g~~ 286 (462)
.. +. .....| ++. .+| ||. +|++
T Consensus 215 ~~-----------------------ls-------~~~~~~------------~~~------------~rP-Fd~~~~G~v 239 (418)
T PRK07910 215 IV-----------------------MS-------TNNDDP------------AGA------------CRP-FDKDRDGFV 239 (418)
T ss_pred Cc-----------------------cc-------cCCCCC------------CCC------------cCC-CcCCCCCEe
Confidence 00 00 000001 112 234 654 4554
Q ss_pred ccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEec-----cCCCCCCccHHHHHHHHHHHcCCCCCCccEEEec
Q 012506 287 TAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEIN 361 (462)
Q Consensus 287 t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~-----~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eih 361 (462)
++||++++||++++.|+++|.+++++|.|++... ..|+..+.+...+++++|+++||+++|||++|.|
T Consensus 240 -------~gEGaa~vvLe~~~~A~~rg~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~Al~~agi~~~did~ie~h 312 (418)
T PRK07910 240 -------FGEGGALMVIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAMTRAIELAGLTPGDIDHVNAH 312 (418)
T ss_pred -------eeceEEEEEEeeHHHHHhCCCcEEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHCCEEEcC
Confidence 8999999999999999999999999999999875 3444455566789999999999999999999999
Q ss_pred CCCHH----HHHHHH-HHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcC----------------------
Q 012506 362 EAFAS----QFVYCR-NKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG---------------------- 414 (462)
Q Consensus 362 dafa~----~~~~~~-e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~---------------------- 414 (462)
.+.+. .|...+ +.+|-...+++.. +..+||+.||+|+.+++..+..|+...
T Consensus 313 gtgt~~~D~~E~~Al~~~fg~~~~~v~s~--K~~~GH~~~AaG~~~li~~~l~l~~~~ipp~~n~~~~~p~~~l~~~~~~ 390 (418)
T PRK07910 313 ATGTSVGDVAEGKAINNALGGHRPAVYAP--KSALGHSVGAVGAVESILTVLALRDGVIPPTLNLENLDPEIDLDVVAGE 390 (418)
T ss_pred CcCCCCCCHHHHHHHHHHhCCCCCceeCc--cccccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCCCC
Confidence 99884 354444 4466433344433 445999999999999999999998742
Q ss_pred ---CCCcEEEEEeecccceeEEEEEEe
Q 012506 415 ---RDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 415 ---~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
...+++++.....||.+.++||.+
T Consensus 391 ~~~~~~~~al~nsfGfGG~N~slvl~~ 417 (418)
T PRK07910 391 PRPGNYRYAINNSFGFGGHNVALAFGR 417 (418)
T ss_pred CcCCCccEEEEeeecCCCeeEEEEEec
Confidence 023678888888888889999875
|
|
| >PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.5e-23 Score=211.40 Aligned_cols=261 Identities=21% Similarity=0.289 Sum_probs=191.6
Q ss_pred HHHHHHHHHHHHHcCCCccc-cCcEEEEeccCCCC-----------c-----------------cccHHHHHHHHcCCCC
Q 012506 77 DLLAPVLKAVIEKTNVDPSE-VGDIVVGTVLAPGS-----------Q-----------------RASECRMAAFYAGFPE 127 (462)
Q Consensus 77 eL~~~A~~~Al~~agl~~~~-Id~vivG~~~~~~~-----------~-----------------~~~~a~~~a~~~Glp~ 127 (462)
.+...++++||+|+|++++. -=++++|+..+... . ....+..++..+|+
T Consensus 58 ~~~~~a~~~Al~dagl~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~-- 135 (381)
T PRK05952 58 DLTKTVVTAALKDAGLTPPLTDCGVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGT-- 135 (381)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCEEEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCC--
Confidence 36678899999999997522 12577777533210 0 01245678888999
Q ss_pred CcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHh
Q 012506 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRF 207 (462)
Q Consensus 128 ~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~ 207 (462)
++|.+++.++|+|+++||..|++.|++|++|++||+|+|.... + +.
T Consensus 136 ~Gp~~ti~~aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~-~-----------------------~~---------- 181 (381)
T PRK05952 136 QGPVLAPMAACATGLWAIAQGVELIQTGQCQRVIAGAVEAPIT-P-----------------------LT---------- 181 (381)
T ss_pred CCccccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCC-H-----------------------HH----------
Confidence 6899999999999999999999999999999999999997322 0 00
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC--CCC
Q 012506 208 GVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK--DGT 285 (462)
Q Consensus 208 gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p--~g~ 285 (462)
...+... +. +++ + ..+| |+. +|+
T Consensus 182 -----------~~~~~~~------~~------------------------ls~-~------------~~rP-fd~~r~G~ 206 (381)
T PRK05952 182 -----------LAGFQQM------GA------------------------LAK-T------------GAYP-FDRQREGL 206 (381)
T ss_pred -----------HHHHHhc------CC------------------------cCC-C------------CCCC-CCCCCCCc
Confidence 0000000 00 000 1 1234 543 344
Q ss_pred cccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEecc-----CCCCCCccHHHHHHHHHHHcCCCCCCccEEEe
Q 012506 286 TTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV-----DPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEI 360 (462)
Q Consensus 286 ~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~-----~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~ei 360 (462)
+ ++||++++||++++.|++++.+++++|.|++.... .|+..+.+...+++++|+++||+++|||++|.
T Consensus 207 v-------~gEGaa~lvLe~~~~A~~rg~~i~a~I~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~agi~p~dId~i~~ 279 (381)
T PRK05952 207 V-------LGEGGAILVLESAELAQKRGAKIYGQILGFGLTCDAYHMSAPEPDGKSAIAAIQQCLARSGLTPEDIDYIHA 279 (381)
T ss_pred c-------ccccEEEEEEeeHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHeeEEEc
Confidence 3 89999999999999999999999999999998643 34444456678999999999999999999999
Q ss_pred cCCCHH----HHHHHHHH-cCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC--------------------
Q 012506 361 NEAFAS----QFVYCRNK-LGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR-------------------- 415 (462)
Q Consensus 361 hdafa~----~~~~~~e~-LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~-------------------- 415 (462)
|.+.+. .+...++. +| +++++++.+..+||+++|+|+.+++.++..|+++.-
T Consensus 280 hgtgt~~~D~~E~~al~~~fg---~~~~v~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~v~~~~ 356 (381)
T PRK05952 280 HGTATRLNDQREANLIQALFP---HRVAVSSTKGATGHTLGASGALGVAFSLLALRHQQLPPCVGLQEPEFDLNFVRQAQ 356 (381)
T ss_pred cCCCCCCCcHHHHHHHHHHcC---CCCeeecchhhhccChHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcCCCcc
Confidence 988764 34444444 33 356777777789999999999999999999997520
Q ss_pred --CCcEEEEEeecccceeEEEEEEe
Q 012506 416 --DCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 416 --~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
..++.++..+..||.+.++||.+
T Consensus 357 ~~~~~~~l~~s~gfGG~na~lvl~~ 381 (381)
T PRK05952 357 QSPLQNVLCLSFGFGGQNAAIALGK 381 (381)
T ss_pred cCCCCEEEEeeecCCCeeEEEEEeC
Confidence 23678888878888888888864
|
|
| >cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.2e-22 Score=211.10 Aligned_cols=271 Identities=21% Similarity=0.274 Sum_probs=191.0
Q ss_pred CHHHHHHHHHHHHHHHcCCCccc-cC----cEEEEeccCCC---------------------Ccc--ccHHHHHHHHcCC
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPSE-VG----DIVVGTVLAPG---------------------SQR--ASECRMAAFYAGF 125 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~~-Id----~vivG~~~~~~---------------------~~~--~~~a~~~a~~~Gl 125 (462)
....|+.+++++||+++|+++++ ++ ++++|+..+.. ... ...+..++..+|+
T Consensus 71 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T cd00828 71 RTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLS 150 (407)
T ss_pred HHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhCc
Confidence 45788999999999999998877 65 46666543211 001 3456678889999
Q ss_pred CCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHH
Q 012506 126 PETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAH 205 (462)
Q Consensus 126 p~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~ 205 (462)
.++|.++++++|+|+++||..|+++|++|++|++||+|+|.++ +..+ .+
T Consensus 151 -~~Gp~~tv~~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~--~~~~--------------------~~-------- 199 (407)
T cd00828 151 -SHGPIKTPVGACATALEALDLAVEAIRSGKADIVVVGGVEDPL--EEGL--------------------SG-------- 199 (407)
T ss_pred -CCCCCcCcccHHHHHHHHHHHHHHHHHcCCCCEEEEccccccC--hHHH--------------------HH--------
Confidence 3589999999999999999999999999999999999999976 2100 00
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCC
Q 012506 206 RFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGT 285 (462)
Q Consensus 206 ~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~ 285 (462)
+.+ .+.+..+ ..+|. . ..+| |+.
T Consensus 200 ----------------f~~------~~~ls~~-------~~~~~------------~------------~~~p-fd~--- 222 (407)
T cd00828 200 ----------------FAN------MGALSTA-------EEEPE------------E------------MSRP-FDE--- 222 (407)
T ss_pred ----------------HHH------cCCCCCC-------CCCCC------------c------------ccCC-CcC---
Confidence 000 0000000 00000 0 1233 322
Q ss_pred cccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCC----CCccHHHHHHHHHHHcCCCCCCccEEEec
Q 012506 286 TTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAI----MGVGPAVAIPAAVKSAGLQLDDIDLFEIN 361 (462)
Q Consensus 286 ~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~----~~~~~~~Ai~~aL~~AGl~~~DID~~eih 361 (462)
..+...++|||+++||++++.|+++|.+++++|.|++........ .+.+...+++++|+++|++++|||+++.|
T Consensus 223 --~~~G~~~gEGAaalvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~a~~~Al~~Agi~~~dId~i~~h 300 (407)
T cd00828 223 --TRDGFVEAEGAGVLVLERAELALARGAPIYGRVAGTASTTDGAGRSVPAGGKGIARAIRTALAKAGLSLDDLDVISAH 300 (407)
T ss_pred --CCCcEEeecceEEEEEeeHHHHHHCCCeEEEEEEEEEeccCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHcCEEecc
Confidence 224445899999999999999999999999999999876543322 23456789999999999999999999999
Q ss_pred CCCHH----HHHHHHHH-cCCC--CCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC-------------------
Q 012506 362 EAFAS----QFVYCRNK-LGLD--PEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR------------------- 415 (462)
Q Consensus 362 dafa~----~~~~~~e~-LGl~--~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~------------------- 415 (462)
++++. .+...++. ++-. +.+|+.. +..+||+.+|+|+.+++.++..|+++.-
T Consensus 301 gtgt~~~D~~E~~ai~~~~~~~~~~~~v~s~--K~~~Gh~~~Asg~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~ 378 (407)
T cd00828 301 GTSTPANDVAESRAIAEVAGALGAPLPVTAQ--KALFGHSKGAAGALQLIGALQSLEHGLIPPTANLDDVDPDVEHLSVV 378 (407)
T ss_pred cccCccccHHHHHHHHHHHhccCCCceeecc--cchhccchhhhhHHHHHHHHHHHhcCccCCCCCCCCCCccccccccc
Confidence 99884 44544443 4432 2344444 3349999999999999999999997520
Q ss_pred ------C--CcEEEEEeecccceeEEEEE
Q 012506 416 ------D--CRFGVISMCIGTGMGAAAVF 436 (462)
Q Consensus 416 ------~--~~~gl~~~~~G~G~g~A~v~ 436 (462)
. .+++++.....||.+.++||
T Consensus 379 ~~~~~~~~~~~~al~~s~gfgG~n~~lv~ 407 (407)
T cd00828 379 GLSRDLNLKVRAALVNAFGFGGSNAALVL 407 (407)
T ss_pred CcCccCCCCccEEEEecccCCCcceEEEC
Confidence 0 15677776666666666653
|
They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues. |
| >PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.5e-21 Score=203.95 Aligned_cols=232 Identities=22% Similarity=0.211 Sum_probs=166.8
Q ss_pred HHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccc
Q 012506 115 ECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLL 194 (462)
Q Consensus 115 ~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (462)
.+..++..+|+ +.|+++++.+|+|+++||..|+++|++|++|++||+|+|....
T Consensus 154 ~a~~i~~~~gl--~G~~~~i~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~------------------------ 207 (425)
T PRK06501 154 IADRLADRFGT--RGLPISLSTACASGATAIQLGVEAIRRGETDRALCIATDGSVS------------------------ 207 (425)
T ss_pred HHHHHHHHhCC--CCCceeecCccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCC------------------------
Confidence 56678889999 5899999999999999999999999999999999999996321
Q ss_pred cHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHh
Q 012506 195 PMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELA 274 (462)
Q Consensus 195 ~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~ 274 (462)
.+.+..|... .+.. .+. ++ +++
T Consensus 208 ----------------~~~~~~~~~~---~~ls-----~~~-----------~~-----------~~~------------ 229 (425)
T PRK06501 208 ----------------AEALIRFSLL---SALS-----TQN-----------DP-----------PEK------------ 229 (425)
T ss_pred ----------------HHHHHHHHHh---hccc-----cCC-----------CC-----------CCc------------
Confidence 0000001000 0000 000 00 011
Q ss_pred cCCCcccC--CCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccC-----CCCCCccHHHHHHHHHHH
Q 012506 275 KLKPVFKK--DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVD-----PAIMGVGPAVAIPAAVKS 347 (462)
Q Consensus 275 ~~~p~f~p--~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~-----p~~~~~~~~~Ai~~aL~~ 347 (462)
..+| |+. +|. .++||++++||++.+.|+++|.++++.+.+++..... +...+.+...+++++|++
T Consensus 230 ~~rp-fd~~r~G~-------v~GEGaaalVLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~AL~~ 301 (425)
T PRK06501 230 ASKP-FSKDRDGF-------VMAEGAGALVLESLESAVARGAKILGIVAGCGEKADSFHRTRSSPDGSPAIGAIRAALAD 301 (425)
T ss_pred ccCC-CCCCCCCe-------eeeccEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 1244 543 333 3799999999999999999999999999999876432 222223456899999999
Q ss_pred cCCCCCCccEEEecCCCHHH----HHHHH-HHcCCC--CCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC-----
Q 012506 348 AGLQLDDIDLFEINEAFASQ----FVYCR-NKLGLD--PEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR----- 415 (462)
Q Consensus 348 AGl~~~DID~~eihdafa~~----~~~~~-e~LGl~--~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~----- 415 (462)
+|++++|||+++.|++++.. +...+ +.+|-. .-||+..+|. +||+++|+|+.+++..+..|++..-
T Consensus 302 agi~p~dId~i~~Hgtgt~~~d~~E~~al~~~~~~~~~~~pv~s~k~~--~Gh~~~AsG~~~~~~~~l~l~~~~ipp~~n 379 (425)
T PRK06501 302 AGLTPEQIDYINAHGTSTPENDKMEYLGLSAVFGERLASIPVSSNKSM--IGHTLTAAGAVEAVFSLLTIQTGRLPPTIN 379 (425)
T ss_pred cCCCHHHcCEEEecCccCcchHHHHHHHHHHHhcccCCCcEEECCCcc--cCCCchhhhHHHHHHHHHHHhcCcCCCcCC
Confidence 99999999999999998753 33333 334422 2367777777 5999999999999999999998520
Q ss_pred --------------------CCcEEEEEeecccceeEEEEEEecc
Q 012506 416 --------------------DCRFGVISMCIGTGMGAAAVFERGD 440 (462)
Q Consensus 416 --------------------~~~~gl~~~~~G~G~g~A~v~~~~~ 440 (462)
+.++.+......||.+.++||+++.
T Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~gfgG~n~~~vl~~~~ 424 (425)
T PRK06501 380 YDNPDPAIPLDVVPNVARDARVTAVLSNSFGFGGQNASLVLTAEP 424 (425)
T ss_pred CCCCCCCCCcccCCCcccCCCCCEEEEeCccCCCeeEEEEEecCC
Confidence 1256677777777888899998764
|
|
| >PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.3e-21 Score=203.17 Aligned_cols=266 Identities=19% Similarity=0.247 Sum_probs=187.1
Q ss_pred HHHHHHHHHHHHHHHcCCCc-cccC----cEEEEeccCCCC-----------cc-------------c-cHHHHHHHHcC
Q 012506 75 PDDLLAPVLKAVIEKTNVDP-SEVG----DIVVGTVLAPGS-----------QR-------------A-SECRMAAFYAG 124 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~-~~Id----~vivG~~~~~~~-----------~~-------------~-~~a~~~a~~~G 124 (462)
...|+..++++||+++|++. ..++ ++++|+..+... .+ + ..+..++..+|
T Consensus 73 ~~~~al~aa~~Al~dAGl~~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~ 152 (405)
T PRK09116 73 VSLMATRASELALEDAGLLGDPILTDGRMGIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFFG 152 (405)
T ss_pred HHHHHHHHHHHHHHHcCCCCccccCCCcEEEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHhC
Confidence 35688889999999999843 2222 577776543210 00 1 14567888899
Q ss_pred CCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHH
Q 012506 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVA 204 (462)
Q Consensus 125 lp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~ 204 (462)
+ ++|.+++.++|+|+++||..|+++|++|++|++||+|+|.++... ..+
T Consensus 153 ~--~Gp~~ti~~acas~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~----------------------~~~------- 201 (405)
T PRK09116 153 L--KGRVIPTSSACTSGSQGIGYAYEAIKYGYQTVMLAGGAEELCPTE----------------------AAV------- 201 (405)
T ss_pred C--CCCcccccchhhhHHHHHHHHHHHHHcCCCCEEEEecchhcChHH----------------------HHH-------
Confidence 9 689999999999999999999999999999999999999854310 000
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC--
Q 012506 205 HRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK-- 282 (462)
Q Consensus 205 ~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p-- 282 (462)
++.+-..+..+ .+| +. ..+| |+.
T Consensus 202 ---------f~~l~~~~~~~---------------------~~~------------~~------------~~rP-fd~~~ 226 (405)
T PRK09116 202 ---------FDTLFATSTRN---------------------DAP------------EL------------TPRP-FDANR 226 (405)
T ss_pred ---------HHHhhhhccCC---------------------CCC------------CC------------CCCC-CcCCC
Confidence 00000000000 011 11 1234 543
Q ss_pred CCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCC---CCccHHHHHHHHHHHcCCCCCCccEEE
Q 012506 283 DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAI---MGVGPAVAIPAAVKSAGLQLDDIDLFE 359 (462)
Q Consensus 283 ~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~---~~~~~~~Ai~~aL~~AGl~~~DID~~e 359 (462)
+|++ ++||++++||++++.|+++|.+++++|.|++........ ...+...+++++|+++|++++|||+++
T Consensus 227 ~G~v-------~gEGa~~~vLe~~~~A~~rga~i~a~i~g~~~~~d~~~~~~p~~~~~~~ai~~AL~~Agi~p~dId~I~ 299 (405)
T PRK09116 227 DGLV-------IGEGAGTLVLEELEHAKARGATIYAEIVGFGTNSDGAHVTQPQAETMQIAMELALKDAGLAPEDIGYVN 299 (405)
T ss_pred CCEe-------eeccEEEEEEccHHHHHhCCCceEEEEEEEEEcCCCCcCCCCCHHHHHHHHHHHHHHhCCCHHHcCEEE
Confidence 4544 799999999999999999999999999999987532221 123446899999999999999999999
Q ss_pred ecCCCHH----HHHHHH-HHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC-------------------
Q 012506 360 INEAFAS----QFVYCR-NKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR------------------- 415 (462)
Q Consensus 360 ihdafa~----~~~~~~-e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~------------------- 415 (462)
.|.+.+. .+...+ +.+|- ..||+... -.+||++||+|+.+++..+..|+++.-
T Consensus 300 ~Hgtgt~~~D~~E~~Ai~~~fg~-~~pv~s~K--~~~GH~~~AaG~~~~~~~~~~l~~~~ippt~~~~~~~~~~~~l~~v 376 (405)
T PRK09116 300 AHGTATDRGDIAESQATAAVFGA-RMPISSLK--SYFGHTLGACGALEAWMSIEMMNEGWFAPTLNLTQVDPACGALDYI 376 (405)
T ss_pred CcCccCCCCCHHHHHHHHHHhCC-CCeeECcc--hhhcccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCcccCcc
Confidence 9998873 344444 44552 23454443 349999999999999999999987520
Q ss_pred -------CCcEEEEEeecccceeEEEEE
Q 012506 416 -------DCRFGVISMCIGTGMGAAAVF 436 (462)
Q Consensus 416 -------~~~~gl~~~~~G~G~g~A~v~ 436 (462)
+.++.|...+..||.+.++||
T Consensus 377 ~~~~~~~~~~~~l~nsfGfGG~n~~lvl 404 (405)
T PRK09116 377 MGEAREIDTEYVMSNNFAFGGINTSLIF 404 (405)
T ss_pred CCCCccCCCCEEEEeeecCCcccEEEEE
Confidence 125677777777778888876
|
|
| >cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-21 Score=203.48 Aligned_cols=266 Identities=20% Similarity=0.227 Sum_probs=189.6
Q ss_pred HHHHHHHHHHHHHHHcCCCccccC----cEEEEeccCCCC-----------cc--------------ccHHHHHHHHcCC
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS-----------QR--------------ASECRMAAFYAGF 125 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id----~vivG~~~~~~~-----------~~--------------~~~a~~~a~~~Gl 125 (462)
...|+..++.+||+++|++++.++ ++++|+..+... .+ ...+..++..+|+
T Consensus 71 ~~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (399)
T cd00832 71 MTRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGM 150 (399)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhCC
Confidence 467888999999999999877654 477776543220 00 1135678888999
Q ss_pred CCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHH
Q 012506 126 PETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAH 205 (462)
Q Consensus 126 p~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~ 205 (462)
++|.+++.++|+|++.||..|+++|++|+ |++||+|+|..... +.+.
T Consensus 151 --~Gp~~ti~~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~p------------------------~~~~------ 197 (399)
T cd00832 151 --RGPSGVVVAEQAGGLDALAQARRLVRRGT-PLVVSGGVDSALCP------------------------WGWV------ 197 (399)
T ss_pred --CCCcccccchhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccCH------------------------HHHH------
Confidence 68999999999999999999999999999 99999999985430 0000
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC--C
Q 012506 206 RFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK--D 283 (462)
Q Consensus 206 ~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p--~ 283 (462)
.+.. .+.+.. ..+| ++ ..+| ||. +
T Consensus 198 ---------------~~~~------~~~ls~--------~~~p------------~~------------~~rP-Fd~~~~ 223 (399)
T cd00832 198 ---------------AQLS------SGRLST--------SDDP------------AR------------AYLP-FDAAAA 223 (399)
T ss_pred ---------------HHHh------ccccCC--------CCCC------------CC------------CcCC-CcCCCC
Confidence 0000 001100 0011 11 2344 544 4
Q ss_pred CCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCC--CCccHHHHHHHHHHHcCCCCCCccEEEec
Q 012506 284 GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAI--MGVGPAVAIPAAVKSAGLQLDDIDLFEIN 361 (462)
Q Consensus 284 g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~--~~~~~~~Ai~~aL~~AGl~~~DID~~eih 361 (462)
|++ ++||++++||++++.|+++|.+++++|.|++........ .+.+...+++++|+++|++++||||++.|
T Consensus 224 G~~-------~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~a~~~al~~ag~~~~~i~~v~~h 296 (399)
T cd00832 224 GYV-------PGEGGAILVLEDAAAARERGARVYGEIAGYAATFDPPPGSGRPPGLARAIRLALADAGLTPEDVDVVFAD 296 (399)
T ss_pred CEe-------eeceEEEEEEeeHHHHHHCCCeEEEEEEeEEEcCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHccEEEec
Confidence 544 899999999999999999999999999999986532211 23455789999999999999999999999
Q ss_pred CCCHH----HHHHHHH-HcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC---------------------
Q 012506 362 EAFAS----QFVYCRN-KLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR--------------------- 415 (462)
Q Consensus 362 dafa~----~~~~~~e-~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~--------------------- 415 (462)
.+.+. .+...++ .+|-...||+...+ .+||+++|+|+.+++.++..|+++.-
T Consensus 297 gtgt~~~D~~E~~al~~~fg~~~~pv~s~K~--~~Gh~~~aaG~~~l~~~~l~l~~~~ipp~~n~~~~~p~~~l~~v~~~ 374 (399)
T cd00832 297 AAGVPELDRAEAAALAAVFGPRGVPVTAPKT--MTGRLYAGGAPLDVATALLALRDGVIPPTVNVTDVPPAYGLDLVTGR 374 (399)
T ss_pred cCcCCCCCHHHHHHHHHHhCCCCCceeCCCc--hhcchHHHHHHHHHHHHHHHHhCCCcCCCCCCCCCCCCCCcccCCCc
Confidence 87764 4544444 45644345554444 48999999999999999999997520
Q ss_pred ----CCcEEEEEeecccceeEEEEE
Q 012506 416 ----DCRFGVISMCIGTGMGAAAVF 436 (462)
Q Consensus 416 ----~~~~gl~~~~~G~G~g~A~v~ 436 (462)
..++.++.....||.+.++||
T Consensus 375 ~~~~~~~~al~nsfgfGG~na~lvl 399 (399)
T cd00832 375 PRPAALRTALVLARGRGGFNSALVV 399 (399)
T ss_pred ccCCCCCEEEEeccCCCCcceEEEC
Confidence 136777777666667777664
|
CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine. |
| >PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.2e-21 Score=203.74 Aligned_cols=268 Identities=20% Similarity=0.261 Sum_probs=188.5
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCc----EEEEeccCCCC-------------------------ccccHHHHHHHHcCC
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVGD----IVVGTVLAPGS-------------------------QRASECRMAAFYAGF 125 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id~----vivG~~~~~~~-------------------------~~~~~a~~~a~~~Gl 125 (462)
...|+..++.+||+++|+++++++. +++|+..+... .....+..++..+|+
T Consensus 72 ~~~l~~~Aa~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 151 (406)
T PRK08439 72 FIQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGL 151 (406)
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhCC
Confidence 4788999999999999999888874 44444321100 001356678889999
Q ss_pred CCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHH
Q 012506 126 PETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAH 205 (462)
Q Consensus 126 p~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~ 205 (462)
+.|.+++.++|+|+++||..|+++|++|++|++|++|+|..... . .+.
T Consensus 152 --~Gp~~~~~~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~~-~---------------------~~~-------- 199 (406)
T PRK08439 152 --KGPNLSSVTACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICP-V---------------------GIG-------- 199 (406)
T ss_pred --CCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecchhccCH-H---------------------HHH--------
Confidence 58999999999999999999999999999999999999985320 0 000
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC--C
Q 012506 206 RFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK--D 283 (462)
Q Consensus 206 ~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p--~ 283 (462)
.+.+. +.+.. ...+| +. ..+| ||. +
T Consensus 200 ---------------~f~~~------~~ls~-------~~~~p------------~~------------~~rp-fd~~~~ 226 (406)
T PRK08439 200 ---------------GFAAM------KALST-------RNDDP------------KK------------ASRP-FDKDRD 226 (406)
T ss_pred ---------------HHHHh------Ccccc-------CCCCC------------cc------------CcCC-ccCCCC
Confidence 00000 00000 00011 11 1234 543 3
Q ss_pred CCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCC---ccHHHHHHHHHHHcCCCCCCccEEEe
Q 012506 284 GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMG---VGPAVAIPAAVKSAGLQLDDIDLFEI 360 (462)
Q Consensus 284 g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~---~~~~~Ai~~aL~~AGl~~~DID~~ei 360 (462)
|.+ ++||++++||++.+.|+++|.+++++|.|++..+....... .+...+++++|+++|+ +||||++.
T Consensus 227 G~v-------~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~p~~~~~~~a~~~al~~ag~--~~i~~v~~ 297 (406)
T PRK08439 227 GFV-------MGEGAGALVLEEYESAKKRGAKIYAEIIGFGESGDANHITSPAPEGPLRAMKAALEMAGN--PKIDYINA 297 (406)
T ss_pred cEE-------eeCceEEEEEccHHHHHHCCCeEEEEEEeEEccCCCCCCCCCCHHHHHHHHHHHHHHcCC--CccCEEEc
Confidence 443 79999999999999999999999999999987653211111 3456899999999998 89999999
Q ss_pred cCCCHH----HHHHHHH-HcCCCC--CCCCCCCCccccCCccchHHHHHHHHHHHHHHhcC-------------------
Q 012506 361 NEAFAS----QFVYCRN-KLGLDP--EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG------------------- 414 (462)
Q Consensus 361 hdafa~----~~~~~~e-~LGl~~--~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~------------------- 414 (462)
|.+.+. .+...++ .+|-.. .+++...+ .+||+++|+|+.+++-.+..|+++.
T Consensus 298 hgtgt~~~D~~E~~al~~~f~~~~~~~~v~s~K~--~~Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~ 375 (406)
T PRK08439 298 HGTSTPYNDKNETAALKELFGSKEKVPPVSSTKG--QIGHCLGAAGAIEAVISIMAMRDGILPPTINQETPDPECDLDYI 375 (406)
T ss_pred cCCcCCCCCHHHHHHHHHHhcccCCCCeEECccc--ccccCchhhhHHHHHHHHHHHhCCeeCCCCCCCCCCCCCCcccC
Confidence 988764 4554444 445332 23444333 3999999999999999999999762
Q ss_pred ------CCCcEEEEEeecccceeEEEEEEe
Q 012506 415 ------RDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 415 ------~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
...++.|+.....||.+.++||.+
T Consensus 376 ~~~~~~~~~~~~l~nsfgfGG~n~~lvl~~ 405 (406)
T PRK08439 376 PNVARKAELNVVMSNSFGFGGTNGVVIFKK 405 (406)
T ss_pred CCccccCCCCEEEEeeecCCCceEEEEEec
Confidence 023677888877888889998875
|
|
| >PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.6e-21 Score=197.99 Aligned_cols=234 Identities=15% Similarity=0.062 Sum_probs=171.2
Q ss_pred HHHHHHHHHHHHHHHcCCCccccC----cEEEEeccCCCCc-------------------------------------cc
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGSQ-------------------------------------RA 113 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id----~vivG~~~~~~~~-------------------------------------~~ 113 (462)
...|+..++++||+|+|++....+ ++++|+..+.... ..
T Consensus 73 ~~~~a~~Aa~~Al~dAGl~~~~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n 152 (398)
T PRK06519 73 WQRLGTYAAGLALDDAGIKGNEELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQLSN 152 (398)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhhhh
Confidence 456888899999999999654332 4677775443100 01
Q ss_pred cHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhccc
Q 012506 114 SECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCL 193 (462)
Q Consensus 114 ~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~ 193 (462)
..+..++..+|+ ++|.+++.++|+|++.||..|+++|++|++|++||+|+|..... .
T Consensus 153 ~~a~~is~~~gl--~Gp~~ti~~acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~~-~-------------------- 209 (398)
T PRK06519 153 LLAGNISIVHKV--TGSSRTFMGEESAGVSAIEIAFARIASGQSDHALVGGAYNAERP-D-------------------- 209 (398)
T ss_pred HHHHHHHHHhCC--CCccccccCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCH-H--------------------
Confidence 245678889999 68999999999999999999999999999999999999985330 0
Q ss_pred ccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHH
Q 012506 194 LPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSEL 273 (462)
Q Consensus 194 ~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l 273 (462)
.+.. +.. . +.+. . .
T Consensus 210 ---~~~~---------------------~~~-~-----~~ls------------------------~-~----------- 223 (398)
T PRK06519 210 ---MLLL---------------------YEL-G-----GLLL------------------------K-G----------- 223 (398)
T ss_pred ---HHHH---------------------HHH-c-----CccC------------------------C-C-----------
Confidence 0000 000 0 0000 0 0
Q ss_pred hcCCCccc-----CCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHc
Q 012506 274 AKLKPVFK-----KDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSA 348 (462)
Q Consensus 274 ~~~~p~f~-----p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~A 348 (462)
..+|.|+ .+|++ ++|||+++||++++.|+++|.+++++|.|++.... +. ...+...+|+++|++|
T Consensus 224 -~~~p~~d~~~~~r~G~v-------~GEGAa~lvLE~~~~A~~Rga~i~AeI~G~~~d~~-~~-~~~~~~~am~~AL~~A 293 (398)
T PRK06519 224 -GWAPVWSRGGEDGGGFI-------LGSGGAFLVLESREHAEARGARPYARISGVESDRA-RR-APGDLEASLERLLKPA 293 (398)
T ss_pred -CCCchhccCccCCCCee-------eeceEEEEEEeeHHHHHhCCCceEEEEEEEeecCC-CC-ChHHHHHHHHHHHHHC
Confidence 0012222 24544 79999999999999999999999999999965432 22 2235678999999999
Q ss_pred CCCCCCccEEEecCCCHH----HHHHHHHH-cCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhc
Q 012506 349 GLQLDDIDLFEINEAFAS----QFVYCRNK-LGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 413 (462)
Q Consensus 349 Gl~~~DID~~eihdafa~----~~~~~~e~-LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~ 413 (462)
|+ ++||||++.|.+.+. .|...+++ ++ .||+...+. +||.+||+|+.+++..+..|++.
T Consensus 294 gl-~~~IdyI~ahgtgT~~~D~~E~~Ai~~~f~---~pvsS~Ks~--~GH~l~AAGa~e~i~~~lal~~g 357 (398)
T PRK06519 294 GG-LAAPTAVISGATGAHPATAEEKAALEAALA---GPVRGIGTL--FGHTMEAQFPLGLALAALSVSKG 357 (398)
T ss_pred CC-cccCCEEEeCCCCCCCccHHHHHHHHHHcC---CCccccchh--hccchHHHHHHHHHHHHHHHhcC
Confidence 99 899999999988764 45555554 45 357766655 89999999999999999999986
|
|
| >cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.6e-21 Score=199.76 Aligned_cols=246 Identities=22% Similarity=0.278 Sum_probs=174.0
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCc----EEEEeccCCCC------------------ccccHHHHHHHHcCCCCCcce
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPSEVGD----IVVGTVLAPGS------------------QRASECRMAAFYAGFPETVPV 131 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~~Id~----vivG~~~~~~~------------------~~~~~a~~~a~~~Glp~~~p~ 131 (462)
...+|+.+|+++||+|+|++++++|. +++|+..++.. .....+..++..+|+ +.|.
T Consensus 86 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl--~g~~ 163 (421)
T cd00833 86 PQQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDL--RGPS 163 (421)
T ss_pred HHHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCC--CCCc
Confidence 34789999999999999999988875 67766533210 012356678889999 5799
Q ss_pred EEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCH
Q 012506 132 RTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTR 211 (462)
Q Consensus 132 ~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisr 211 (462)
++++.+|+|++.||..|+++|++|.+|++||+|+|.++.... +.. ....
T Consensus 164 ~~v~~acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~----------------------~~~-----~~~~---- 212 (421)
T cd00833 164 LTVDTACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDM----------------------FVG-----FSKA---- 212 (421)
T ss_pred eeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCCHHH----------------------HHH-----HhhC----
Confidence 999999999999999999999999999999999998643100 000 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCC
Q 012506 212 KEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNS 291 (462)
Q Consensus 212 e~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~ 291 (462)
+.+. | +. ..+| |+. ..+.
T Consensus 213 --------------------~~l~------------~------------~~------------~~~p-f~~-----~~~g 230 (421)
T cd00833 213 --------------------GMLS------------P------------DG------------RCRP-FDA-----DADG 230 (421)
T ss_pred --------------------CCCC------------C------------CC------------CCCC-CCC-----CCCC
Confidence 0000 0 00 0122 221 1122
Q ss_pred CCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCC--C---CCCccHHHHHHHHHHHcCCCCCCccEEEecCCCHH
Q 012506 292 SQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDP--A---IMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFAS 366 (462)
Q Consensus 292 s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p--~---~~~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~ 366 (462)
..++|||+++||++++.|++++.+++++|.|++...... . ....+...+++++|+++|++++|||+++.|...+.
T Consensus 231 ~~~geGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~p~~~~~~~a~~~al~~Agi~~~did~i~~hgtgt~ 310 (421)
T cd00833 231 YVRGEGVGVVVLKRLSDALRDGDRIYAVIRGSAVNQDGRTKGITAPSGEAQAALIRRAYARAGVDPSDIDYVEAHGTGTP 310 (421)
T ss_pred eeeeceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHCcEEEeeCCCCC
Confidence 337999999999999999999999999999998764321 1 11334568999999999999999999999999875
Q ss_pred H----HHHHHH-HcCCC---CCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcC
Q 012506 367 Q----FVYCRN-KLGLD---PEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG 414 (462)
Q Consensus 367 ~----~~~~~e-~LGl~---~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~ 414 (462)
. +...++ .++-. ..++..+.-+..+||+++|+|+.+++.++.+|+.+.
T Consensus 311 ~~D~~E~~al~~~f~~~~~~~~~~~v~s~k~~~Gh~~~aag~~~l~~~~~~l~~~~ 366 (421)
T cd00833 311 LGDPIEVEALAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLIKVVLALEHGV 366 (421)
T ss_pred CCCHHHHHHHHHHHhccCCCCCceeeecCcCccccchhhhHHHHHHHHHHHHhcCC
Confidence 3 333333 23322 123333333444999999999999999999999764
|
PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits. |
| >PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.4e-21 Score=195.44 Aligned_cols=265 Identities=20% Similarity=0.181 Sum_probs=187.1
Q ss_pred CCCHHHHHHHHHHHHHHHcC-CCccccCcEEEEec-----cCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHH
Q 012506 72 DTYPDDLLAPVLKAVIEKTN-VDPSEVGDIVVGTV-----LAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAV 145 (462)
Q Consensus 72 d~~~~eL~~~A~~~Al~~ag-l~~~~Id~vivG~~-----~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai 145 (462)
+.+..+|+..|++++|++++ +++++||.+++... .++.. .+.....++..+|++.+.+.++++.+|+|+++||
T Consensus 62 ~~r~~~La~~Al~~aL~~a~~~~~~~i~lil~~~~~~~~~~~~~~-~~~~~~~~~~~lG~~~~~~~~~i~~~casg~~Al 140 (348)
T PRK06147 62 PERLAEMAAPAIAEALEGLPALDASEAPLLLCVAEEERPGRPPDL-EERLLRELEARLGLRLEPGSAVIARGRVSGAVAL 140 (348)
T ss_pred hHHHHHHHHHHHHHHHHhcccccccCCcEEEEeCchhcCCCCcch-HHHHHHHHHHHhCCCCCCCcccccccchHHHHHH
Confidence 34778999999999999999 78999998776432 11110 1234567788899965678899999999999999
Q ss_pred HHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHH
Q 012506 146 ADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKA 225 (462)
Q Consensus 146 ~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A 225 (462)
..|+++|++|++|.+||+|+|.++.... + + .+...
T Consensus 141 ~~A~~~i~~G~~~~~lvgg~d~~~~~~~----------------------~------------------~-----~~~~~ 175 (348)
T PRK06147 141 AQARRLIAAGGCPRVLVAGVDSLLTGPT----------------------L------------------A-----HYEAR 175 (348)
T ss_pred HHHHHHHHcCCCCEEEEEeeccccCHHH----------------------H------------------H-----HHHHh
Confidence 9999999999999999999999865100 0 0 00000
Q ss_pred HHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeC
Q 012506 226 AAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMK 305 (462)
Q Consensus 226 ~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s 305 (462)
. .+ .+.+ +.+|++ ++|||+++||++
T Consensus 176 ~------~l-----------------------~~~~-------------------~~~G~v-------~GEGA~a~vLe~ 200 (348)
T PRK06147 176 D------RL-----------------------LTSQ-------------------NSNGFI-------PGEAAAAVLLGR 200 (348)
T ss_pred h------cc-----------------------CCCC-------------------CCCcee-------eeceEEEEEEcc
Confidence 0 00 0000 013333 799999999999
Q ss_pred HHHHHhcCCCceEEEEEEEEeccC------CCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCCHHH----HHHH-HHH
Q 012506 306 RSVAMRKGLPILGVFRTFAAVGVD------PAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ----FVYC-RNK 374 (462)
Q Consensus 306 ~e~A~~~g~~~~~~i~g~~~~~~~------p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~----~~~~-~e~ 374 (462)
.+.|++++.++++ .+++..... +...+.+...+++++|+++|++++|||+++.|-..+.. +... .+.
T Consensus 201 ~~~A~~rga~i~a--~g~~~~~~~~~~~~~~p~~g~gl~~ai~~AL~~agl~~~dId~v~ah~~gt~~~d~~e~~A~~~~ 278 (348)
T PRK06147 201 PAGGEAPGLPLLG--LGLGREPAPVGESEDLPLRGDGLTQAIRAALAEAGCGLEDMDYRIADLNGEQYRFKEAALAEMRL 278 (348)
T ss_pred HhhhhcCCCceEE--EEEeecCCCcccCCCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEcCCCCCccchHHHHHHHHHH
Confidence 9999999999987 455443221 11134566789999999999999999999999875543 2332 334
Q ss_pred cCCCC--CCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEeccc
Q 012506 375 LGLDP--EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFERGDC 441 (462)
Q Consensus 375 LGl~~--~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~~~~ 441 (462)
+|-.. .+++.. +..+||.++|+|+.+++.++.+|++.-....+.|+..+.-.|.=.|++|+..+.
T Consensus 279 f~~~~~~~~~~~~--k~~~Gh~~aAaG~~~~~~a~~~~~~g~~~g~~~L~~s~~d~g~r~a~~l~~~~~ 345 (348)
T PRK06147 279 FRVRKEFFDLWHP--AECIGEIGAAIGPALLGVALAASRKGYGPGPNVLCHLSDDDGARAALVLEYRRG 345 (348)
T ss_pred hhhccCCCceecc--hHhhcchHHHHHHHHHHHHHHHHHcCcCCCCcEEEEecCCCCceEEEEEecccc
Confidence 55432 345544 444999999999999999999999874322556665555555556788886543
|
|
| >CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.1e-21 Score=196.23 Aligned_cols=255 Identities=19% Similarity=0.220 Sum_probs=178.2
Q ss_pred eecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCC
Q 012506 58 YRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQ 137 (462)
Q Consensus 58 ~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~ 137 (462)
.+|++.+ ++...++.+..+|+.+|+++||+++|+++++||.+++++..++.. ...+..++..+|+. +.++++++.+
T Consensus 35 ~~~gi~~-r~~~~~~~~~~~la~~A~~~aL~~ag~~~~dId~vi~~s~~~~~~--~~~~~~v~~~Lg~~-~~~~~~v~~~ 110 (326)
T CHL00203 35 TRTGIKK-RHLAPSSTSLTKLAAEAANKALDKAHMDPLEIDLIILATSTPDDL--FGSASQLQAEIGAT-RAVAFDITAA 110 (326)
T ss_pred eccCeEE-EEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC--CchHHHHHHHhCCC-CCceeeeccc
Confidence 6788876 456778899999999999999999999999999999998766543 23355778889995 6889999999
Q ss_pred CchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHH
Q 012506 138 CSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQA 217 (462)
Q Consensus 138 CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~ 217 (462)
|+|++.++..|.++|++|.++++|++|+|.||....
T Consensus 111 Casg~~al~~A~~~i~sg~~~~~Lvv~~e~~s~~~~-------------------------------------------- 146 (326)
T CHL00203 111 CSGFILALVTATQFIQNGSYKNILVVGADTLSKWID-------------------------------------------- 146 (326)
T ss_pred chhHHHHHHHHHHHHHcCCCCEEEEEEehhhhCcCC--------------------------------------------
Confidence 999999999999999999999999999999876210
Q ss_pred HHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCc
Q 012506 218 AVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDG 297 (462)
Q Consensus 218 a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDG 297 (462)
|. + + .+....+||
T Consensus 147 ------------------------------~~------------~--~-----------------------~~~~~fgDg 159 (326)
T CHL00203 147 ------------------------------WS------------D--R-----------------------KTCILFGDG 159 (326)
T ss_pred ------------------------------cc------------c--C-----------------------CceEEEcce
Confidence 00 0 0 001125899
Q ss_pred ceEEEEeCHHHHHhcCCCceEE-EEE-------EEEe---------c--cCCC-CC-----------Cc---cHHHHHHH
Q 012506 298 AGAVLLMKRSVAMRKGLPILGV-FRT-------FAAV---------G--VDPA-IM-----------GV---GPAVAIPA 343 (462)
Q Consensus 298 AaAvvL~s~e~A~~~g~~~~~~-i~g-------~~~~---------~--~~p~-~~-----------~~---~~~~Ai~~ 343 (462)
|+|+||.+.+.. + ++.. +.. +... + ..|. .+ .. ....++++
T Consensus 160 a~A~ll~~~~~~---~--~~~~~~~t~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ 234 (326)
T CHL00203 160 AGAAIIGASYEN---S--ILGFKLCTDGKLNSHLQLMNKPVNNQSFGTTKLPQGQYQSISMNGKEVYKFAVFQVPAVIIK 234 (326)
T ss_pred eeEEEEEEcCCC---C--eEEEEEEEcCCCcceEEecCCCCCcccccccccccCCcceEEECCHHHHHHHHHHHHHHHHH
Confidence 999999864321 1 1110 000 0000 0 0000 00 00 01246888
Q ss_pred HHHHcCCCCCCccEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEE
Q 012506 344 AVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVIS 423 (462)
Q Consensus 344 aL~~AGl~~~DID~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~ 423 (462)
+|+++|++++|||+|-+|+.+..+...+.+.||++++++..+ .--+||...++-...+.+++++-+-+.+ ++.+..
T Consensus 235 ~L~~~g~~~~did~~~~hq~~~~~~~~~~~~lgl~~~k~~~~--l~~~Gn~~sasi~~~L~~~~~~g~~~~G--d~vll~ 310 (326)
T CHL00203 235 CLNALNISIDEVDWFILHQANKRILEAIANRLSVPNSKMITN--LEKYGNTSAASIPLALDEAIQNNKIQPG--QIIVLS 310 (326)
T ss_pred HHHHcCCCHHHCCEEEECCCCHHHHHHHHHHhCCCHHHhhhH--HHhhCcHHHHHHHHHHHHHHHhCCCCCC--CEEEEE
Confidence 999999999999999999999999999999999998887543 3458888777765555555432111223 455554
Q ss_pred eecccceeEEEEEE
Q 012506 424 MCIGTGMGAAAVFE 437 (462)
Q Consensus 424 ~~~G~G~g~A~v~~ 437 (462)
. .|.|+.+..++.
T Consensus 311 ~-~G~G~s~~~~v~ 323 (326)
T CHL00203 311 G-FGAGLTWGAIVL 323 (326)
T ss_pred E-EchhhhheEEEE
Confidence 3 566666544443
|
|
| >PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.2e-20 Score=195.78 Aligned_cols=269 Identities=16% Similarity=0.208 Sum_probs=189.6
Q ss_pred HHHHHHHHHHHHHHHcCCCccccC----cEEEEeccCCCC------------cc--------------ccHHHHHHHHcC
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS------------QR--------------ASECRMAAFYAG 124 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id----~vivG~~~~~~~------------~~--------------~~~a~~~a~~~G 124 (462)
...++..++++||+++|++++..+ ++++|+..+... .+ ...+..++..+|
T Consensus 71 ~~~~a~~aa~~Al~dAGl~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~~ 150 (406)
T PRK07967 71 ASAYAYLAMEQAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFK 150 (406)
T ss_pred HHHHHHHHHHHHHHHcCCCCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHHC
Confidence 456888999999999999765544 466666432210 00 125667888999
Q ss_pred CCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHH
Q 012506 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVA 204 (462)
Q Consensus 125 lp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~ 204 (462)
+ ++|.++++++|+|++.||..|+++|++|++|++||+|+|..+... ..+.
T Consensus 151 l--~Gp~~tvs~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~~~~~~----------------------~~~f------ 200 (406)
T PRK07967 151 I--KGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELDWEM----------------------SCLF------ 200 (406)
T ss_pred C--CCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeeecccChHH----------------------HHHH------
Confidence 9 689999999999999999999999999999999999999753300 0000
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC--
Q 012506 205 HRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK-- 282 (462)
Q Consensus 205 ~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p-- 282 (462)
+. ..+.. . .++ .+| +. ..+| |+.
T Consensus 201 ----------~~------~~~ls-~---~~~----------~~p------------~~------------~~rP-Fd~~r 225 (406)
T PRK07967 201 ----------DA------MGALS-T---KYN----------DTP------------EK------------ASRA-YDANR 225 (406)
T ss_pred ----------HH------hhhhc-c---CCC----------CCC------------Cc------------CCcC-CcCCC
Confidence 00 00000 0 000 001 11 1244 543
Q ss_pred CCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCC---CCccHHHHHHHHHHHcCCCCCCccEEE
Q 012506 283 DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAI---MGVGPAVAIPAAVKSAGLQLDDIDLFE 359 (462)
Q Consensus 283 ~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~---~~~~~~~Ai~~aL~~AGl~~~DID~~e 359 (462)
+|++ ++||++++||++.+.|+++|.+++++|.|++........ .+.+...+++++|+.++ + ||||++
T Consensus 226 ~G~v-------~gEGaa~lvLe~~~~A~~rga~i~a~i~G~g~~~d~~~~~~p~~~~~~~a~~~Al~~~~--~-~Idyi~ 295 (406)
T PRK07967 226 DGFV-------IAGGGGVVVVEELEHALARGAKIYAEIVGYGATSDGYDMVAPSGEGAVRCMQMALATVD--T-PIDYIN 295 (406)
T ss_pred Ccee-------eeceEEEEEEeeHHHHHhCCCcEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHhCCC--C-CccEEE
Confidence 4554 899999999999999999999999999999986532221 23455789999998655 4 999999
Q ss_pred ecCCCHH----HHHHHHH-HcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC-------------------
Q 012506 360 INEAFAS----QFVYCRN-KLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR------------------- 415 (462)
Q Consensus 360 ihdafa~----~~~~~~e-~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~------------------- 415 (462)
.|.+-+. .|...++ .+|-...+|+...+. +||++||+|+.+++..+..|+.+.-
T Consensus 296 aHgtGT~~~D~~E~~Ai~~~fg~~~~~v~s~K~~--~GH~~~AaG~~e~i~~~lal~~~~iPpt~~~~~~~~~~~~~~~~ 373 (406)
T PRK07967 296 THGTSTPVGDVKELGAIREVFGDKSPAISATKSL--TGHSLGAAGVQEAIYSLLMMEHGFIAPSANIEELDPQAAGMPIV 373 (406)
T ss_pred cCCCCCCCCCHHHHHHHHHHhCCCCCeeECcccc--cccCccccchHHHHHHHHHHhcCcCCCCCCCCCCCccccCCCcc
Confidence 9987774 4554444 466433356655444 8999999999999999999987520
Q ss_pred -------CCcEEEEEeecccceeEEEEEEecc
Q 012506 416 -------DCRFGVISMCIGTGMGAAAVFERGD 440 (462)
Q Consensus 416 -------~~~~gl~~~~~G~G~g~A~v~~~~~ 440 (462)
..++.++.....||.+.++||++.+
T Consensus 374 ~~~~~~~~~~~~l~~sfgfGG~n~~lvl~~~~ 405 (406)
T PRK07967 374 TETTDNAELTTVMSNSFGFGGTNATLVFRRYK 405 (406)
T ss_pred CCCCcCCCCCEEEEecccCCCeeEEEEEEecC
Confidence 1256788777778888999998753
|
|
| >PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.2e-20 Score=192.58 Aligned_cols=273 Identities=21% Similarity=0.237 Sum_probs=187.4
Q ss_pred hhhcccCCCCCcEEEEEeee--------------------------cccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCC
Q 012506 40 AAYHRTSVYGDDVVIVAAYR--------------------------TALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVD 93 (462)
Q Consensus 40 ~~~~~~~~~~~~v~Ivg~~r--------------------------Tp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~ 93 (462)
-.|+++.-.+..+.|+|.+. |++.+ ++...++.++.+|+.+|+++||+++|++
T Consensus 36 ~~~~~~~~~~~~~~I~g~g~~lP~~~v~n~el~~~~~~~~~~i~~~tGi~~-R~~~~~~~~~~~La~~Aa~~aL~~agi~ 114 (379)
T PLN02326 36 SKYRRPRRVGSGSKLVGCGSAVPKLLITNDDLSKLVDTSDEWIATRTGIRN-RRVLSGDETLTSLAVEAAKKALEMAGVD 114 (379)
T ss_pred ccccCcccccCCcEEEEEEEECCCceecHHHHHHhcCCchhheecccCcce-EeecCCCCCHHHHHHHHHHHHHHHcCCC
Confidence 34677776666777777763 33333 2333467899999999999999999999
Q ss_pred ccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCC
Q 012506 94 PSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPM 173 (462)
Q Consensus 94 ~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~ 173 (462)
+++||.+++++..++.. ...+..++..+|++ +.++++++.+|+|+++||..|.+.|++|.++.+|++|.|.+|....
T Consensus 115 ~~dId~li~~s~~~~~~--~~~a~~v~~~LG~~-~~~~~dv~~~Ca~~~~aL~~A~~~l~~g~~~~vLVv~~e~~s~~~~ 191 (379)
T PLN02326 115 PEDVDLVLLCTSSPDDL--FGSAPQVQAALGCT-NALAFDLTAACSGFVLGLVTAARFIRGGGYKNVLVIGADALSRYVD 191 (379)
T ss_pred HHHCCEEEEEeCCCCcc--CcHHHHHHHHhCCC-CCceeeccccchHHHHHHHHHHHHHHcCCCCEEEEEEechhcCCCC
Confidence 99999999998765543 23566788999996 7899999999999999999999999999999999999999875110
Q ss_pred CCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCC
Q 012506 174 AWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDE 253 (462)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~ 253 (462)
+.
T Consensus 192 --------------------------------------------------------------------------~~---- 193 (379)
T PLN02326 192 --------------------------------------------------------------------------WT---- 193 (379)
T ss_pred --------------------------------------------------------------------------cc----
Confidence 00
Q ss_pred CceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceE-EEEEEE-----E--
Q 012506 254 KPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILG-VFRTFA-----A-- 325 (462)
Q Consensus 254 ~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~-~i~g~~-----~-- 325 (462)
| ..++...+|||+|+||.+.+... .+ ++. .+...+ .
T Consensus 194 -------d--------------------------~~~~~lfGDGAaAvlL~~~~~~~-~~--i~~~~~~t~g~~~~~~~~ 237 (379)
T PLN02326 194 -------D--------------------------RGTCILFGDGAGAVVLQACDDDE-DG--LLGFDMHSDGNGHKHLHA 237 (379)
T ss_pred -------c--------------------------cCceEEEcceeEEEEEEEcCCCC-Cc--eEEEEEEEcCCCCCeEEe
Confidence 0 00011258999999998754221 11 111 111100 0
Q ss_pred --ecc--------------CC----CC--CC-cc----------HHHHHHHHHHHcCCCCCCccEEEecCCCHHHHHHHH
Q 012506 326 --VGV--------------DP----AI--MG-VG----------PAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCR 372 (462)
Q Consensus 326 --~~~--------------~p----~~--~~-~~----------~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~~~ 372 (462)
.+. .+ .. +. .+ ...+++++|+++|++++|||+|-+|+.+..+...+.
T Consensus 238 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~n~~~~~~~~ 317 (379)
T PLN02326 238 TFKGEDDDSSGGNTNGVGDFPPKKASYSCIQMNGKEVFKFAVRCVPQVIESALQKAGLTAESIDWLLLHQANQRIIDAVA 317 (379)
T ss_pred cCCCCcccccccccccccccccccccccceEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHH
Confidence 000 00 00 00 01 124678899999999999999999999999988899
Q ss_pred HHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEE
Q 012506 373 NKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAV 435 (462)
Q Consensus 373 e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v 435 (462)
+.||++++++..+ .--+||...++-...+.+++.+-+-+.+ ++.|... .|.|+.+..+
T Consensus 318 ~~Lgl~~ek~~~~--l~~~GNt~sAsi~~~L~~~~~~g~~~~G--d~vll~~-~G~G~t~~~~ 375 (379)
T PLN02326 318 QRLGIPPEKVISN--LANYGNTSAASIPLALDEAVRSGKVKKG--DVIATAG-FGAGLTWGSA 375 (379)
T ss_pred HHcCCCHHHeeec--HhhcCcHHHHHHHHHHHHHHHcCCCCCC--CEEEEEE-EChhheeeEE
Confidence 9999999887544 3458888777755555555432111223 5665543 5666665443
|
|
| >PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.6e-20 Score=187.38 Aligned_cols=254 Identities=22% Similarity=0.256 Sum_probs=179.0
Q ss_pred ecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCC
Q 012506 59 RTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQC 138 (462)
Q Consensus 59 rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~C 138 (462)
+|++.+ ++...++.++.+|+.+|++++|+++|+++++||.+++++..++.. .+..+..++..+|+ ..+++++++.+|
T Consensus 37 ~~gi~~-r~~~~~~~~~~~la~~A~~~al~~agl~~~~id~vi~~~~~~~~~-~~~~~~~i~~~lG~-~~~~~~~v~~~C 113 (319)
T PRK09352 37 RTGIKE-RRIAAPDETTSDLATEAAKKALEAAGIDPEDIDLIIVATTTPDYA-FPSTACLVQARLGA-KNAAAFDLSAAC 113 (319)
T ss_pred hcCeEE-EEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CchHHHHHHHHhCC-CCCcEeeccccc
Confidence 566654 345567899999999999999999999999999999998876543 45567789999999 578999999999
Q ss_pred chHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHH
Q 012506 139 SSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAA 218 (462)
Q Consensus 139 sSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a 218 (462)
+|++.||..|+++|++|.+|++||+|+|+++....
T Consensus 114 asg~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~~--------------------------------------------- 148 (319)
T PRK09352 114 SGFVYALSTADQFIRSGAYKNVLVIGAEKLSRIVD--------------------------------------------- 148 (319)
T ss_pred hhHHHHHHHHHHHHHcCCCCEEEEEEehhhccccC---------------------------------------------
Confidence 99999999999999999999999999999865100
Q ss_pred HHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcc
Q 012506 219 VDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGA 298 (462)
Q Consensus 219 ~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGA 298 (462)
+. + + ......+|||
T Consensus 149 -----------------------------~~------------~-------------------~------~~~~~~gDGa 162 (319)
T PRK09352 149 -----------------------------WT------------D-------------------R------STCVLFGDGA 162 (319)
T ss_pred -----------------------------cc------------c-------------------C------CceEEEeccc
Confidence 00 0 0 0011258999
Q ss_pred eEEEEeCHHHHHhcCCCceE-EEEEEEEec---cCCCC-------------CCc--------cHHHHHHHHHHHcCCCCC
Q 012506 299 GAVLLMKRSVAMRKGLPILG-VFRTFAAVG---VDPAI-------------MGV--------GPAVAIPAAVKSAGLQLD 353 (462)
Q Consensus 299 aAvvL~s~e~A~~~g~~~~~-~i~g~~~~~---~~p~~-------------~~~--------~~~~Ai~~aL~~AGl~~~ 353 (462)
+|+||.+.... + .+. ++...+... ..|.. .+. ....+++++|+++|++++
T Consensus 163 aA~ll~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~g~~~~ 237 (319)
T PRK09352 163 GAVVLGASEEP---G--ILSTHLGSDGSYGDLLYLPGGGSRGPASPGYLRMEGREVFKFAVRELAKVAREALEAAGLTPE 237 (319)
T ss_pred eEEEEEEcCCC---C--eEEEEEEEcCCCCCeEEeCCCCCCCCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 99999986532 1 111 111111000 00100 000 113478889999999999
Q ss_pred CccEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEE
Q 012506 354 DIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAA 433 (462)
Q Consensus 354 DID~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A 433 (462)
|||+|.+|..+........+.||++++++..+ .-.+||..+++-...+..++..=+-..+ ++.+... .|.|+...
T Consensus 238 di~~~~~h~~~~~~~~~~~~~lg~~~~~~~~~--~~~~Gn~~~a~~~~~L~~~~~~g~~~~G--d~vll~s-~G~G~~~~ 312 (319)
T PRK09352 238 DIDWLVPHQANLRIIDATAKKLGLPMEKVVVT--VDKYGNTSAASIPLALDEAVRDGRIKRG--DLVLLEG-FGGGLTWG 312 (319)
T ss_pred HCCEEEECCCCHHHHHHHHHHhCCCHHHhhhh--HHhhCCHHHHHHHHHHHHHHHcCCCCCC--CEEEEEE-EchhheeE
Confidence 99999999999999899999999998877543 2348998888866666655532111223 4444432 46565553
Q ss_pred -EEE
Q 012506 434 -AVF 436 (462)
Q Consensus 434 -~v~ 436 (462)
++|
T Consensus 313 ~~ll 316 (319)
T PRK09352 313 AALV 316 (319)
T ss_pred EEEE
Confidence 444
|
|
| >TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.7e-20 Score=187.77 Aligned_cols=247 Identities=15% Similarity=0.255 Sum_probs=175.2
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHH
Q 012506 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAA 150 (462)
Q Consensus 71 ~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~ 150 (462)
++.++.+|+.+|+++||+++|+++++||.+++++..++.. .+..+..++..+|++...+.++++.+|+++..+|..|++
T Consensus 46 ~~~~~~~la~~Aa~~aL~~agl~~~dID~li~~s~~~~~~-~p~~a~~v~~~LGl~~~~~~~dv~~aC~g~~~al~~A~~ 124 (345)
T TIGR00748 46 LDEDTATIGVEAARNALKRAKIDPKDIGAVYVGSESHPYA-VKPTATIVAEAIGATPDLTAADLEFACKAGTAGIQACMG 124 (345)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcc-ccchHHHHHHHcCCCCCceEEEHHHhHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999988766543 455677888999995468899999999999999999999
Q ss_pred HHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Q 012506 151 AIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 230 (462)
Q Consensus 151 ~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~ 230 (462)
+|++|.++.+||++.|.++..+.
T Consensus 125 ~i~sg~~~~vLVv~~d~~~~~~~--------------------------------------------------------- 147 (345)
T TIGR00748 125 LVASGMIKYGLAIGADTAQGAPG--------------------------------------------------------- 147 (345)
T ss_pred HHHcCCCCEEEEEEEeecccCCC---------------------------------------------------------
Confidence 99999999999999999753110
Q ss_pred cCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHH
Q 012506 231 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 310 (462)
Q Consensus 231 ~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~ 310 (462)
+ ...| ..+|||+|+||...+..
T Consensus 148 -------------------------------~--------------~~~~------------~~GDGAaA~vl~~~~~~- 169 (345)
T TIGR00748 148 -------------------------------D--------------ALEY------------TAGAGGAAYIIGEKNTV- 169 (345)
T ss_pred -------------------------------c--------------cCcc------------cCCCceEEEEEccCCcc-
Confidence 0 0000 03788888888753311
Q ss_pred hcCCCceEEEEEEEEecc----------C--CC----CCC-----ccHHHHHHHHHHHcCCCCCCccEEEecCCCHHHHH
Q 012506 311 RKGLPILGVFRTFAAVGV----------D--PA----IMG-----VGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFV 369 (462)
Q Consensus 311 ~~g~~~~~~i~g~~~~~~----------~--p~----~~~-----~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~ 369 (462)
..+.+...... . |. ..+ .....+++++|+++|++++|||+|-+|+++..+..
T Consensus 170 -------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~did~~i~Hq~~~~~~~ 242 (345)
T TIGR00748 170 -------AYFEGTYSYTTDTPDFWRREGEPYPRHGGRFTGEPAYFHHVVTAAKGLMEKLGLTPEDFDYAVFHQPNGKFYL 242 (345)
T ss_pred -------eEeecccceecccccccccCCCcCCCcCCeecChHHHHHHHHHHHHHHHHHcCCCHHHcCEEEeCCCChHHHH
Confidence 01111110000 0 10 000 01136788999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEE-EEEEeccccccc
Q 012506 370 YCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAA-AVFERGDCADEL 445 (462)
Q Consensus 370 ~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A-~v~~~~~~~~~~ 445 (462)
.+.+.||++++++..+=-.--+||...++-...+.+++.+++ .+ ++.+.. ..|.|..++ .+++-.+....+
T Consensus 243 ~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~~~~~~--~G--d~vll~-~~G~G~s~~~~~~~~~~~~~~~ 314 (345)
T TIGR00748 243 VAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAVLDIAE--PG--DRILAV-SYGSGAGSDAFSIVVQDAIEEK 314 (345)
T ss_pred HHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHHHHhcC--CC--CEEEEE-EecCCcceeEEEEEEchhHHHH
Confidence 899999999887654210134899988888777777765432 33 444443 356666664 455444444433
|
Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound. |
| >PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.2e-20 Score=186.15 Aligned_cols=241 Identities=19% Similarity=0.204 Sum_probs=171.6
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCC-CcceEEecCCCchHHHHHHHHHH
Q 012506 72 DTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE-TVPVRTVNRQCSSGLQAVADVAA 150 (462)
Q Consensus 72 d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~-~~p~~~v~~~CsSgl~Ai~~Aa~ 150 (462)
+.++.+|+.+|++++|+++|+++++||.+++++..++.. .+..+..++..+|++. .+++++++.+|+|+++||..|..
T Consensus 49 ~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~-~p~~a~~v~~~lgl~~~~~~~~~v~~~C~~~~~al~~a~~ 127 (329)
T PRK07204 49 GETSSYMGAEAAKKAVEDAKLTLDDIDCIICASGTIQQA-IPCTASLIQEQLGLQHSGIPCFDINSTCLSFITALDTISY 127 (329)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCC-CccHHHHHHHHhCCCCCCceEEEccchhHHHHHHHHHHHH
Confidence 568999999999999999999999999999998766543 4667888999999964 36999999999999999999999
Q ss_pred HHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Q 012506 151 AIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 230 (462)
Q Consensus 151 ~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~ 230 (462)
+|++|.++.+|+++.|.++...
T Consensus 128 ~l~~g~~~~~Lvv~~e~~s~~~---------------------------------------------------------- 149 (329)
T PRK07204 128 AIECGRYKRVLIISSEISSVGL---------------------------------------------------------- 149 (329)
T ss_pred HHHCCCCCEEEEEEeccccCCC----------------------------------------------------------
Confidence 9999999999999999976510
Q ss_pred cCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHH
Q 012506 231 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 310 (462)
Q Consensus 231 ~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~ 310 (462)
++.. ..+....+|||+|+||.+.+..
T Consensus 150 ----------------~~~~-------------------------------------~~~~~lfGDGAaA~ll~~~~~~- 175 (329)
T PRK07204 150 ----------------NWGQ-------------------------------------NESCILFGDGAAAVVITKGDHS- 175 (329)
T ss_pred ----------------Cccc-------------------------------------CcceEEEecccEEEEEEEcCCC-
Confidence 0000 0001125899999999875431
Q ss_pred hcCCCceE-------------EEEEEEEeccCCCC------------CC-cc--------HHHHHHHHHHHcCCCCCCcc
Q 012506 311 RKGLPILG-------------VFRTFAAVGVDPAI------------MG-VG--------PAVAIPAAVKSAGLQLDDID 356 (462)
Q Consensus 311 ~~g~~~~~-------------~i~g~~~~~~~p~~------------~~-~~--------~~~Ai~~aL~~AGl~~~DID 356 (462)
.+++. .+.+++.. .++.. +. .. ...+++++|+++|++++|||
T Consensus 176 ---~~il~~~~~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~did 251 (329)
T PRK07204 176 ---SRILASHMETYSSGAHLSEIRGGGTM-IHPREYSEERKEDFLFDMNGRAIFKLSSKYLMKFIDKLLMDAGYTLADID 251 (329)
T ss_pred ---CcEEEEEEEEecCCCCceEEecCCcC-CCCcccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC
Confidence 11221 11111110 01100 00 00 23688899999999999999
Q ss_pred EEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEE
Q 012506 357 LFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAA 434 (462)
Q Consensus 357 ~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~ 434 (462)
+|-+|+.+..+...+.+.||++++++..+ .--+||...++-...+.+++++=+-+.+ ++.+... .|.|+.++.
T Consensus 252 ~~~~H~~~~~~~~~i~~~l~l~~e~~~~~--~~~~Gn~~sas~~~~L~~~~~~g~~~~G--d~vll~~-~G~G~s~~~ 324 (329)
T PRK07204 252 LIVPHQASGPAMRLIRKKLGVDEERFVTI--FEDHGNMIAASIPVALFEAIKQKKVQRG--NKILLLG-TSAGLSIGG 324 (329)
T ss_pred EEEeCCCCHHHHHHHHHHcCCCHHHhhhh--HhhhCcHHHHHHHHHHHHHHHcCCCCCC--CEEEEEE-Echhhhhee
Confidence 99999999999999999999998876533 3348888877765556555443111223 4555543 566666544
|
|
| >PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.1e-20 Score=188.40 Aligned_cols=266 Identities=17% Similarity=0.153 Sum_probs=180.6
Q ss_pred EEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEe
Q 012506 55 VAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTV 134 (462)
Q Consensus 55 vg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v 134 (462)
+|..+.++.. .+.++.+|+.+|++++|+++|+++++||.+++++..++.. .+..+..++..+|++.++++++|
T Consensus 47 ~Gi~~R~~~~------~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~-~p~~a~~v~~~lgl~~~~~~~~v 119 (338)
T PRK09258 47 TGIRERRWWP------EGTQLSDGAIAAGRKALAEAGIDPSDIGLLINTSVCRDYL-EPATACRVHHNLGLPKSCANFDV 119 (338)
T ss_pred cCceeEecCC------CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CChHHHHHHHHcCCCCCCceeeh
Confidence 4555544432 4778999999999999999999999999999999876655 57788899999999766899999
Q ss_pred cCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHH
Q 012506 135 NRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQ 214 (462)
Q Consensus 135 ~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~ 214 (462)
+.+|+|++.||..|.+.|++|.++.+||++.|.++..... . +.+
T Consensus 120 ~~~C~~~~~al~~A~~~i~~g~~~~~Lvv~~e~~s~~~~~-------~--------------------------~~~--- 163 (338)
T PRK09258 120 SNACLGFLNGMLDAANMIELGQIDYALVVSGESAREIVEA-------T--------------------------IDR--- 163 (338)
T ss_pred hhhhHHHHHHHHHHHHHHHcCCCCEEEEEEecccchhccc-------h--------------------------hhh---
Confidence 9999999999999999999999999999999998752100 0 000
Q ss_pred HHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCc
Q 012506 215 DQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQV 294 (462)
Q Consensus 215 ~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~ 294 (462)
+. . ++ .+.+ + | .+.......
T Consensus 164 -------------------~~-----------~-------------~~-----~~~~------~-~-----~~~~~~~~~ 183 (338)
T PRK09258 164 -------------------LL-----------A-------------PE-----TTRE------D-F-----AQSFATLTL 183 (338)
T ss_pred -------------------hc-----------c-------------Cc-----cchh------h-h-----hhccceEEe
Confidence 00 0 00 0000 0 0 000111226
Q ss_pred CCcceEEEEeCHHHHHhcCCCceEEEEEEEEec----c-----CCCCCCc-----------cHHHHHHHHHHHcCCCCCC
Q 012506 295 SDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG----V-----DPAIMGV-----------GPAVAIPAAVKSAGLQLDD 354 (462)
Q Consensus 295 sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~----~-----~p~~~~~-----------~~~~Ai~~aL~~AGl~~~D 354 (462)
+|||+|+||.+.+.. ..+. .+.+..... . ....+.. ....+++++|+++|++++|
T Consensus 184 GDGA~A~ll~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~d 258 (338)
T PRK09258 184 GSGAAAAVLTRGSLH-PRGH----RLLGGVTRAATEHHELCQGGRDGMRTDAVGLLKEGVELAVDTWEAFLAQLGWAVEQ 258 (338)
T ss_pred cccceEEEEecCCCC-CCcc----eeeeeeeecCCCcccccccCccceEEcHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 899999999875421 1111 222222110 0 0001100 1124778899999999999
Q ss_pred ccEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEE
Q 012506 355 IDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAA 433 (462)
Q Consensus 355 ID~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A 433 (462)
||+|-+|..+..+...+.+.||++++++..+- --+||..+++-...+.+++.+=+-+.+ ++.|... .|.|....
T Consensus 259 id~~i~H~~~~~~~~~~~~~lgl~~~k~~~~~--~~~GN~~sas~~~~L~~~~~~g~~~~G--d~vll~~-~G~G~s~~ 332 (338)
T PRK09258 259 VDRVICHQVGAAHTRAILKALGIDPEKVFTTF--PTLGNMGPASLPITLAMAAEEGFLKPG--DRVALLG-IGSGLNCS 332 (338)
T ss_pred CCEEecCCCCHHHHHHHHHHhCCCHHHceehH--hhhCCcHHhHHHHHHHHHHHhCCCCCC--CEEEEEE-echhHhhH
Confidence 99999999999999999999999988775542 348898888876666666543111223 5555543 45555443
|
|
| >TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | Back alignment and domain information |
|---|
Probab=99.85 E-value=8.8e-20 Score=183.49 Aligned_cols=251 Identities=20% Similarity=0.251 Sum_probs=175.9
Q ss_pred ecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCC
Q 012506 59 RTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQC 138 (462)
Q Consensus 59 rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~C 138 (462)
++.+.+ ++...++.++.+|+.+|++++|+++|+++++||.+++++..++.. .+..+..++..+|++ ..++++++.+|
T Consensus 36 ~~gi~~-r~~~~~~~~~~~la~~A~~~al~~agl~~~~Id~~i~~~~~~~~~-~~~~a~~l~~~lGl~-~~~~~~v~~~C 112 (318)
T TIGR00747 36 RTGIKE-RRIAADDETSSTMGFEAAKRAIENAGISKDDIDLIIVATTTPDHA-FPSAACMVQAYLGIK-GIPAFDLSAAC 112 (318)
T ss_pred ccCceE-EEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCC-CChHHHHHHHHhCCC-CCcEeehhhhh
Confidence 355443 234457889999999999999999999999999999998876653 566778899999995 57999999999
Q ss_pred chHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHH
Q 012506 139 SSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAA 218 (462)
Q Consensus 139 sSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a 218 (462)
+|++.||..|+++|++|.++++|++|+|.++...
T Consensus 113 ~s~~~al~~A~~~i~~g~~~~~Lvv~~e~~~~~~---------------------------------------------- 146 (318)
T TIGR00747 113 AGFIYALSVAKQYIESGKYKTVLVVGAEKLSSTL---------------------------------------------- 146 (318)
T ss_pred HHHHHHHHHHHHHHHcCCCCEEEEEEehhhcCcC----------------------------------------------
Confidence 9999999999999999999999999999976410
Q ss_pred HHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcc
Q 012506 219 VDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGA 298 (462)
Q Consensus 219 ~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGA 298 (462)
++.. + .+....+|||
T Consensus 147 ----------------------------~~~~-------------------------------~------~~~~~~GDGA 161 (318)
T TIGR00747 147 ----------------------------DWTD-------------------------------R------GTCVLFGDGA 161 (318)
T ss_pred ----------------------------CcCC-------------------------------C------CeEEEEecce
Confidence 0000 0 0011258999
Q ss_pred eEEEEeCHHHHHhcCCCceE-EEEEEEEec---cCC-------CCC------C--------ccHHHHHHHHHHHcCCCCC
Q 012506 299 GAVLLMKRSVAMRKGLPILG-VFRTFAAVG---VDP-------AIM------G--------VGPAVAIPAAVKSAGLQLD 353 (462)
Q Consensus 299 aAvvL~s~e~A~~~g~~~~~-~i~g~~~~~---~~p-------~~~------~--------~~~~~Ai~~aL~~AGl~~~ 353 (462)
+|+||.+.+... .++. .+...+... .-| ... + .....+++++|+++|++++
T Consensus 162 aA~lL~~~~~~~----~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~ 237 (318)
T TIGR00747 162 GAVVLGESEDPG----GIISTHLGADGTQGEALYLPAGGRPTSGPSPFITMEGNEVFKHAVRKMGDVVEETLEANGLDPE 237 (318)
T ss_pred eEEEEeecCCCC----cEEEEEEEEcCCCcceEEECCCCcCCCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 999998765321 1111 111100000 000 000 0 0113467889999999999
Q ss_pred CccEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeE
Q 012506 354 DIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGA 432 (462)
Q Consensus 354 DID~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~ 432 (462)
|||+|.+|..+......+.+.||++++++..+ .--+||..+++-...+.+++..=+-+.+ ++.+.-. .|.|+..
T Consensus 238 di~~~~~h~~~~~~~~~~~~~lgi~~~k~~~~--~~~~Gn~~sas~~~~L~~~~~~~~~~~G--d~vll~~-~G~G~t~ 311 (318)
T TIGR00747 238 DIDWFVPHQANLRIIEALAKRLELDMSQVVKT--VHKYGNTSAASIPLALDELLRTGRIKPG--DLLLLVA-FGGGLTW 311 (318)
T ss_pred HCCEEEECCCCHHHHHHHHHHcCCCHHHeeeh--HhhhCCHHHHHHHHHHHHHHHcCCCCCC--CEEEEEE-Eehhhee
Confidence 99999999999999999999999999877644 3348888888866666665542111223 4544432 4656554
|
Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment. |
| >PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.8e-19 Score=181.68 Aligned_cols=244 Identities=21% Similarity=0.233 Sum_probs=173.2
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHH
Q 012506 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAA 150 (462)
Q Consensus 71 ~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~ 150 (462)
++.++.+|+.+|++++|+++|+++++||.+++++..++.. .+..+..++..+|++ ..++++++.+|+|++.||..|.+
T Consensus 49 ~~~~~~~la~~A~~~al~~ag~~~~~Id~li~~~~~~~~~-~~~~a~~l~~~lg~~-~~~~~~v~~~C~~~~~al~~A~~ 126 (325)
T PRK12879 49 VEEYTSDLAIKAAERALARAGLDAEDIDLIIVATTTPDYL-FPSTASQVQARLGIP-NAAAFDINAACAGFLYGLETANG 126 (325)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CChHHHHHHHHhCCC-CCcEEEECccchHHHHHHHHHHH
Confidence 5778999999999999999999999999999998776554 567788899999995 58999999999999999999999
Q ss_pred HHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Q 012506 151 AIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 230 (462)
Q Consensus 151 ~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~ 230 (462)
+|++|.++.+|++++|.++....
T Consensus 127 ~l~~g~~~~~Lvv~~e~~s~~~~--------------------------------------------------------- 149 (325)
T PRK12879 127 LITSGLYKKVLVIGAERLSKVTD--------------------------------------------------------- 149 (325)
T ss_pred HHHcCCCCEEEEEEehhhcCcCC---------------------------------------------------------
Confidence 99999999999999999865100
Q ss_pred cCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHH
Q 012506 231 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 310 (462)
Q Consensus 231 ~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~ 310 (462)
+. + +. .....+|||+|+||.+.+..
T Consensus 150 -----------------~~------------~--------------~~-----------~~~~~GDgAaA~ll~~~~~~- 174 (325)
T PRK12879 150 -----------------YT------------D--------------RT-----------TCILFGDGAGAVVLEATENE- 174 (325)
T ss_pred -----------------cc------------c--------------cC-----------ceEEEeecceEEEEEecCCC-
Confidence 00 0 00 01125899999999875531
Q ss_pred hcCCCceEEEEEE-E-------Eec----cCCC--C-------CCc--------cHHHHHHHHHHHcCCCCCCccEEEec
Q 012506 311 RKGLPILGVFRTF-A-------AVG----VDPA--I-------MGV--------GPAVAIPAAVKSAGLQLDDIDLFEIN 361 (462)
Q Consensus 311 ~~g~~~~~~i~g~-~-------~~~----~~p~--~-------~~~--------~~~~Ai~~aL~~AGl~~~DID~~eih 361 (462)
.+ ++....+. + ... .++. . .+. ....+++++|+++|++++|||+|-+|
T Consensus 175 -~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~did~~~~h 251 (325)
T PRK12879 175 -PG--FIDYVLGTDGDGGDILYRTGLGTTMDRDALSGDGYIVQNGREVFKWAVRTMPKGARQVLEKAGLTKDDIDWVIPH 251 (325)
T ss_pred -CC--eEEEEEEEcCCCCCeEEEcCCCCCCCccccccCccEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEC
Confidence 11 11111000 0 000 0000 0 000 11357889999999999999999999
Q ss_pred CCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeE-EEEE
Q 012506 362 EAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGA-AAVF 436 (462)
Q Consensus 362 dafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~-A~v~ 436 (462)
..+..+...+.+.||++++++..+ .--+||...++-...+.+++.+=+-+.+ ++.+... .|.|... +++|
T Consensus 252 ~~~~~~~~~~~~~lg~~~~~~~~~--~~~~Gn~~sas~~~~L~~~~~~g~~~~G--d~vll~~-~G~G~~~~~~l~ 322 (325)
T PRK12879 252 QANLRIIESLCEKLGIPMEKTLVS--VEYYGNTSAATIPLALDLALEQGKIKPG--DTLLLYG-FGAGLTWAALLV 322 (325)
T ss_pred CCCHHHHHHHHHHcCCCHHHhhhh--HhhhCchHHHHHHHHHHHHHHcCCCCCC--CEEEEEE-EchhhhhEEEEE
Confidence 999999889999999998876543 3458998888876666666543111223 4444433 4666555 3444
|
|
| >PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.5e-19 Score=186.21 Aligned_cols=97 Identities=14% Similarity=0.206 Sum_probs=86.4
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHH
Q 012506 72 DTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAA 151 (462)
Q Consensus 72 d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~ 151 (462)
+.++.+|+.+|+++||+++|+++++||.+++++..++.. .+..+..++..+|++ .+++++++.+|+|++++|..|+..
T Consensus 60 ~~~~~~La~~A~~~aL~~agi~~~dId~li~~s~~~~~~-~p~~a~~v~~~Lgl~-~~~~~~v~~~Cas~~~al~~A~~~ 137 (378)
T PRK06816 60 THSNAQMAAEAIRDLLDDAGFSLGDIELLACGTSQPDQL-MPGHASMVHGELGAP-PIEVVSSAGVCAAGMMALKYAYLS 137 (378)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEECCCCcC-ChHHHHHHHhhCCCC-CCceeeecCcCHHHHHHHHHHHHH
Confidence 357899999999999999999999999999999876543 344456778889995 579999999999999999999999
Q ss_pred HHccCCCEEEEEeecCCCC
Q 012506 152 IKAGFYDIGIGAGLESMTV 170 (462)
Q Consensus 152 I~sG~~d~vLv~G~E~ms~ 170 (462)
|++|.++.+||+|+|.+|.
T Consensus 138 i~sg~~~~vLvv~~E~~s~ 156 (378)
T PRK06816 138 VKAGESRNAVATASELASR 156 (378)
T ss_pred HHCCCCCEEEEEeEccchh
Confidence 9999999999999999987
|
|
| >cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.8e-20 Score=184.10 Aligned_cols=240 Identities=23% Similarity=0.248 Sum_probs=172.8
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHH
Q 012506 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAA 150 (462)
Q Consensus 71 ~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~ 150 (462)
++.++.+|+.+|++++|+++|+++++||.+++++..++.. .+..+..++..+|++ ++++++++.+|+|++.+|..|++
T Consensus 46 ~~~~~~~la~~A~~~al~~ag~~~~~Id~li~~~~~~~~~-~~~~~~~l~~~lg~~-~~~~~~v~~~C~s~~~al~~A~~ 123 (320)
T cd00830 46 PGETTSDLAVEAAKKALEDAGIDADDIDLIIVATSTPDYL-FPATACLVQARLGAK-NAAAFDINAACSGFLYGLSTAAG 123 (320)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CCcHHHHHHHHhCCC-CCcEeeccccchHHHHHHHHHHH
Confidence 5688999999999999999999999999999998876654 466788899999996 78999999999999999999999
Q ss_pred HHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Q 012506 151 AIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 230 (462)
Q Consensus 151 ~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~ 230 (462)
+|++|.++.+|++++|.++....
T Consensus 124 ~i~~g~~~~vLvv~~e~~s~~~~--------------------------------------------------------- 146 (320)
T cd00830 124 LIRSGGAKNVLVVGAETLSRILD--------------------------------------------------------- 146 (320)
T ss_pred HHHcCCCCEEEEEEehhhccccC---------------------------------------------------------
Confidence 99999999999999999865100
Q ss_pred cCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHH
Q 012506 231 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 310 (462)
Q Consensus 231 ~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~ 310 (462)
|+ ++ ......+|||+|+||.+.+.
T Consensus 147 ---~~-----------~~----------------------------------------~~~~~~GDgAaA~ll~~~~~-- 170 (320)
T cd00830 147 ---WT-----------DR----------------------------------------STAVLFGDGAGAVVLEATEE-- 170 (320)
T ss_pred ---cc-----------cC----------------------------------------CceEEEeccceEEEEEecCC--
Confidence 00 00 00112589999999987653
Q ss_pred hcCCCceEEEEEE-EE----eccC------C--------CC--C-C--------ccHHHHHHHHHHHcCCCCCCccEEEe
Q 012506 311 RKGLPILGVFRTF-AA----VGVD------P--------AI--M-G--------VGPAVAIPAAVKSAGLQLDDIDLFEI 360 (462)
Q Consensus 311 ~~g~~~~~~i~g~-~~----~~~~------p--------~~--~-~--------~~~~~Ai~~aL~~AGl~~~DID~~ei 360 (462)
+..++...... .. ...+ | .. + + .....++.++|+++|++++|||+|-+
T Consensus 171 --~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~g~~~~di~~~~~ 248 (320)
T cd00830 171 --DPGILDSVLGSDGSGADLLTIPAGGSRSPFEDAEGGDPYLVMDGREVFKFAVRLMPESIEEALEKAGLTPDDIDWFVP 248 (320)
T ss_pred --CCcEEEEEEEEcCCCCCeEEeCCCCcCCccccccccCccEEEcChHHHHHHHHhhHHHHHHHHHHcCCCHHHCCEEEE
Confidence 11222111100 00 0000 0 00 0 0 01246888999999999999999999
Q ss_pred cCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeE
Q 012506 361 NEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGA 432 (462)
Q Consensus 361 hdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~ 432 (462)
|..+......+.+.||++++++..+ .--+||..+++-...+.+++.+-+-+.+ ++.+... +|.|+..
T Consensus 249 h~~~~~~~~~~~~~lgl~~~~~~~~--~~~~Gn~~sas~~~~L~~~~~~~~~~~G--~~vll~~-~G~G~~~ 315 (320)
T cd00830 249 HQANLRIIEAVAKRLGLPEEKVVVN--LDRYGNTSAASIPLALDEAIEEGKLKKG--DLVLLLG-FGAGLTW 315 (320)
T ss_pred CCCCHHHHHHHHHHhCCCHHHhhhh--HHhhCcHHHHHHHHHHHHHHHcCCCCCC--CEEEEEE-EchHHhh
Confidence 9999999999999999998887543 2348998888876666666543221233 4555433 4555443
|
It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA. |
| >PRK04262 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.2e-19 Score=181.83 Aligned_cols=247 Identities=17% Similarity=0.240 Sum_probs=177.3
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHH
Q 012506 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAA 150 (462)
Q Consensus 71 ~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~ 150 (462)
.+.++.+|+.+|+++||+++|+++++||.+++++..+... .+..+..++..+|++..+++++++.+|++++++|..|..
T Consensus 47 ~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~-~p~~a~~v~~~Lgl~~~~~~~dv~~~C~~~~~aL~~A~~ 125 (347)
T PRK04262 47 PDEDTATIAVEAARNALKRAGIDPKEIGAVYVGSESHPYA-VKPTATIVAEALGATPDLTAADLEFACKAGTAALQAAMG 125 (347)
T ss_pred CCcCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcc-cccHHHHHHHHcCCCCCceEEEHHHhHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999998766654 456677888999996557899999999999999999999
Q ss_pred HHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Q 012506 151 AIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 230 (462)
Q Consensus 151 ~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~ 230 (462)
+|++|.++.+|+++.|....
T Consensus 126 ~i~sg~~~~aLVv~~e~~~~------------------------------------------------------------ 145 (347)
T PRK04262 126 LVKSGMIKYALAIGADTAQG------------------------------------------------------------ 145 (347)
T ss_pred HHHcCCCCEEEEEEEeeecc------------------------------------------------------------
Confidence 99999999999999997311
Q ss_pred cCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHH
Q 012506 231 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 310 (462)
Q Consensus 231 ~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~ 310 (462)
+|.. +..+ + .+|||+|+||.+.+.
T Consensus 146 ----------------~~~~--------------------------~~~~-----~-------~GDGA~A~ll~~~~~-- 169 (347)
T PRK04262 146 ----------------APGD--------------------------ALEY-----T-------AAAGGAAFIIGKEEV-- 169 (347)
T ss_pred ----------------CCCC--------------------------CCCC-----c-------CCCCcEEEEEecCcc--
Confidence 0000 0000 0 378888888875331
Q ss_pred hcCCCceEEEEEEEEecc------------CCC---CCC------ccHHHHHHHHHHHcCCCCCCccEEEecCCCHHHHH
Q 012506 311 RKGLPILGVFRTFAAVGV------------DPA---IMG------VGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFV 369 (462)
Q Consensus 311 ~~g~~~~~~i~g~~~~~~------------~p~---~~~------~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~ 369 (462)
..++.++..... .|. .+. .....+++++|+++|++++|||+|-+|+.+..+..
T Consensus 170 ------~~~i~~~~~~~~d~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~n~~~~~ 243 (347)
T PRK04262 170 ------IAEIEATYSYTTDTPDFWRREGEPYPRHGGRFTGEPAYFKHIISAAKGLMEKLGLKPSDYDYAVFHQPNGKFPL 243 (347)
T ss_pred ------cceeeccccccccchhhcCCCCCcCCCcCceecchHHHHHHHHHHHHHHHHHhCcCHHHhceeecCCCchHHHH
Confidence 112222110000 010 000 12246788999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeE-EEEEEeccccccc
Q 012506 370 YCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGA-AAVFERGDCADEL 445 (462)
Q Consensus 370 ~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~-A~v~~~~~~~~~~ 445 (462)
.+.+.||++++++..+-=.--+||..+|+-...+.+++.++ +.+ ++.|... .|.|... +.+++..+.+.++
T Consensus 244 ~~~~~Lgl~~ek~~~~~~~~~~GNt~sAsi~~~L~~~~~~~--~~G--d~vll~~-~G~G~~~~~~~~~~~~~~~~~ 315 (347)
T PRK04262 244 RVAKMLGFTKEQVKPGLLTPYIGNTYSGSALLGLAAVLDVA--KPG--DRILVVS-FGSGAGSDAFSITVTDAIEEK 315 (347)
T ss_pred HHHHHcCCCHHHhhccchhhhhCChHHHHHHHHHHHHHHhC--CCC--CEEEEEe-cCCCcceeeEEEEechhHHHh
Confidence 99999999988765321123489999999888887776543 233 4555543 5666665 4566655555544
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=99.83 E-value=5e-19 Score=214.01 Aligned_cols=228 Identities=20% Similarity=0.197 Sum_probs=169.3
Q ss_pred HHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccc
Q 012506 115 ECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLL 194 (462)
Q Consensus 115 ~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (462)
.+..++..+|| ++|.++|+++|+|++.||+.|++.|++|++|++|++|++..... . .
T Consensus 185 ~A~RIS~~f~L--~Gps~tVdtACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~~p-~--------------------~ 241 (2582)
T TIGR02813 185 ISGRIANRFDL--GGMNCVVDAACAGSLAAIRMALSELLEGRSEMMITGGVCTDNSP-F--------------------M 241 (2582)
T ss_pred HHHHHHHHhCC--CCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecceeeCCH-H--------------------H
Confidence 46778899999 68999999999999999999999999999999999999875330 0 0
Q ss_pred cHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHh
Q 012506 195 PMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELA 274 (462)
Q Consensus 195 ~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~ 274 (462)
.++ +.+. + .+++|+.+
T Consensus 242 ~~~------------------------fs~~------~------------------------~lS~~g~c---------- 257 (2582)
T TIGR02813 242 YMS------------------------FSKT------P------------------------AFTTNEDI---------- 257 (2582)
T ss_pred HHH------------------------HHhc------c------------------------CcCCCCCc----------
Confidence 000 0000 0 11223323
Q ss_pred cCCCcccC--CCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCC--CCC---CccHHHHHHHHHHH
Q 012506 275 KLKPVFKK--DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDP--AIM---GVGPAVAIPAAVKS 347 (462)
Q Consensus 275 ~~~p~f~p--~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p--~~~---~~~~~~Ai~~aL~~ 347 (462)
+| ||. +|++ ++||++++||.+.+.|++.|.+|++.|.|++.+...- ... ..+...+++++|++
T Consensus 258 --rp-FD~~adG~v-------~GEGag~vvLkrL~dA~~dGd~IyAvI~G~g~~~DG~~~~itaP~~~gq~~~i~~Al~~ 327 (2582)
T TIGR02813 258 --QP-FDIDSKGMM-------IGEGIGMMALKRLEDAERDGDRIYAVIKGVGASSDGKFKSIYAPRPEGQAKALKRAYDD 327 (2582)
T ss_pred --cC-CCCCCCccc-------ccceEEEEEeCcHHHHHhCCCcEEEEEEEEEEcCCCCCCCCcCCCHHHHHHHHHHHHHH
Confidence 33 654 4554 8999999999999999999999999999999875322 111 12346899999999
Q ss_pred cCCCCCCccEEEecCCCHH----HHHHHH-HHcCCCC---CCCCCCCCccccCCccchHHHHHHHHHHHHHHhcC-----
Q 012506 348 AGLQLDDIDLFEINEAFAS----QFVYCR-NKLGLDP---EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG----- 414 (462)
Q Consensus 348 AGl~~~DID~~eihdafa~----~~~~~~-e~LGl~~---~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~----- 414 (462)
||++++||||+|.|.+-+. .+...+ +.||-.. .++.+..-+..+||..+|+|+..++.++..|+++.
T Consensus 328 Agi~p~~I~yIeaHGTGT~~gD~~E~~Al~~vf~~~~~~~~~~~vgSvKs~iGH~~~AAG~a~lik~~lal~~~~iPp~~ 407 (2582)
T TIGR02813 328 AGFAPHTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHIALGSVKSQIGHTKSTAGTAGMIKAVLALHHKVLPPTI 407 (2582)
T ss_pred cCCCHHHCCEEEecCCCCCCCCHHHHHHHHHHhcccccCCCCceeeccccccccchHhHHHHHHHHHHHHHhcCCcCCCC
Confidence 9999999999999988774 344333 4455432 23433333445999999999999999999998752
Q ss_pred ------------------------------CCCcEEEEEeecccceeEEEEEEec
Q 012506 415 ------------------------------RDCRFGVISMCIGTGMGAAAVFERG 439 (462)
Q Consensus 415 ------------------------------~~~~~gl~~~~~G~G~g~A~v~~~~ 439 (462)
+..++++++.++.||.+..+||+..
T Consensus 408 ~~~~pnp~~~~~~~~~~v~~~~~pw~~~~~~~~r~a~vnsfGfGGtN~hvvlee~ 462 (2582)
T TIGR02813 408 NVDQPNPKLDIENSPFYLNTETRPWMQREDGTPRRAGISSFGFGGTNFHMVLEEY 462 (2582)
T ss_pred CCCCCCCCCCccccceeecCCcccCcccCCCCccEEEEeCccCCCeeEEEEEeec
Confidence 0136788888788889999999875
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.8e-19 Score=180.77 Aligned_cols=243 Identities=15% Similarity=0.170 Sum_probs=171.6
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHH
Q 012506 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAA 150 (462)
Q Consensus 71 ~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~ 150 (462)
.+.+..+|+.+|+++||+++|+++++||.||+++.+++.. .|..+..++..+|++..+++++++.+|++++++|..|..
T Consensus 56 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~d~~-~P~~a~~v~~~Lg~~~~~~~~di~~~C~g~~~aL~~A~~ 134 (353)
T PRK12880 56 ENTCVSDLGKHAANTLLQGLNIDKNSLDALIVVTQSPDFF-MPSTACYLHQLLNLSSKTIAFDLGQACAGYLYGLFVAHS 134 (353)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CCcHHHHHHHHhCCCCCceEEehhhhhHHHHHHHHHHHH
Confidence 5778999999999999999999999999999999998776 788999999999997678999999999999999999999
Q ss_pred HHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Q 012506 151 AIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 230 (462)
Q Consensus 151 ~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~ 230 (462)
+|++|..+ +|+++.|..|...
T Consensus 135 ~i~~~~~~-~LVv~~e~~S~~~---------------------------------------------------------- 155 (353)
T PRK12880 135 LIQSGLGK-ILLICGDTLSKFI---------------------------------------------------------- 155 (353)
T ss_pred HHHcCCCC-EEEEEehhhhccC----------------------------------------------------------
Confidence 99999999 9999999876510
Q ss_pred cCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHH
Q 012506 231 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 310 (462)
Q Consensus 231 ~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~ 310 (462)
+|. + + ...++ .+|||+|+||.+.+...
T Consensus 156 ----------------~~~------------d--~---------~~~~l--------------FGDGAaA~vl~~~~~~~ 182 (353)
T PRK12880 156 ----------------HPK------------N--M---------NLAPI--------------FGDGVSATLIEKTDFNE 182 (353)
T ss_pred ----------------Ccc------------c--C---------Cceee--------------ecccceEEEEEecCCCC
Confidence 010 0 0 00122 48999999998533210
Q ss_pred hcCCCceEEEEEEEE----e----c-c-CCC---------------------CC-Ccc--------HHHHHHHHHHHcCC
Q 012506 311 RKGLPILGVFRTFAA----V----G-V-DPA---------------------IM-GVG--------PAVAIPAAVKSAGL 350 (462)
Q Consensus 311 ~~g~~~~~~i~g~~~----~----~-~-~p~---------------------~~-~~~--------~~~Ai~~aL~~AGl 350 (462)
+ ...+...+. . + . .|. .| +.. ...+++++|+++|+
T Consensus 183 --~---~~~~~~~~~~~~~~~~p~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl 257 (353)
T PRK12880 183 --A---FFELGSDGKYFDKLIIPKGAMRIPKADIFNDDSLMQTEEFRQLENLYMDGANIFNMALECEPKSFKEILEFSKV 257 (353)
T ss_pred --c---eEEEEecCCCCCeEEecCCCcCCCccccccccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 1 111111110 0 0 0 000 01 111 13578899999999
Q ss_pred CCCCccEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccce
Q 012506 351 QLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGM 430 (462)
Q Consensus 351 ~~~DID~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~ 430 (462)
+++|||+|-+|+....+...+.++||++++++... -.--+||..++| +..++.++..+++ .+ .|. ...|+|+
T Consensus 258 ~~~did~~v~HQ~~~~i~~~i~~~Lgl~~ek~~~~-~l~~~GNtssas----ip~~L~~~~~~~~-~~-~ll-~~~G~G~ 329 (353)
T PRK12880 258 DEKDIAFHLFHQSNAYLVDCIKEELKLNDDKVPNF-IMEKYANLSACS----LPALLCELDTPKE-FK-ASL-SAFGAGL 329 (353)
T ss_pred CHHHCCEEEECCCCHHHHHHHHHHhCCCHHHhhhh-hHHhhCCHHHHH----HHHHHHHHHHcCC-cE-EEE-EEEchhh
Confidence 99999999999999999999999999999887321 112256655444 5555555554433 13 333 3357777
Q ss_pred eEEEEEEec
Q 012506 431 GAAAVFERG 439 (462)
Q Consensus 431 g~A~v~~~~ 439 (462)
.++.++.+.
T Consensus 330 s~g~~ll~~ 338 (353)
T PRK12880 330 SWGSAVLNF 338 (353)
T ss_pred hheEeEEEE
Confidence 765554444
|
|
| >cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.1e-19 Score=179.64 Aligned_cols=234 Identities=18% Similarity=0.223 Sum_probs=172.1
Q ss_pred EEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceE
Q 012506 53 VIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVR 132 (462)
Q Consensus 53 ~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~ 132 (462)
.-+|+.+++|.. ++.++.+|+.+|++++|+++|+++++||.+++++..+... .+..+..++..+|++ .++.+
T Consensus 32 ~~~gi~~r~~~~------~~~~~~~l~~~a~~~aL~~ag~~~~~Id~li~~~~~~~~~-~~~~~~~i~~~lg~~-~~~~~ 103 (324)
T cd00827 32 YTTGIGQRHMAG------DDEDVPTMAVEAARRALERAGIDPDDIGLLIVATESPIDK-GKSAATYLAELLGLT-NAEAF 103 (324)
T ss_pred eeeecceeEecC------CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CccHHHHHHHHcCCC-CCcee
Confidence 347888888864 4788999999999999999999999999999998876654 566788999999997 89999
Q ss_pred EecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHH
Q 012506 133 TVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRK 212 (462)
Q Consensus 133 ~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre 212 (462)
+++.+|+|++.|+..|+++|++|.++.+|++++|.++..+..
T Consensus 104 ~v~~~C~s~~~al~~A~~~i~~g~~~~vlvv~~e~~~~~~~~-------------------------------------- 145 (324)
T cd00827 104 DLKQACYGGTAALQLAANLVESGPWRYALVVASDIASYLLDE-------------------------------------- 145 (324)
T ss_pred ehhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEEHHhhhcccC--------------------------------------
Confidence 999999999999999999999999999999999998762110
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCC
Q 012506 213 EQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSS 292 (462)
Q Consensus 213 ~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s 292 (462)
+..+..
T Consensus 146 --------------------------------------------------------------------------~~~~~~ 151 (324)
T cd00827 146 --------------------------------------------------------------------------GSALEP 151 (324)
T ss_pred --------------------------------------------------------------------------CCCccc
Confidence 000111
Q ss_pred CcCCcceEEEEeCHHHHHhcCCCceEEEEEEE---------Ee-ccC--C-----------CC----C----CccHHHHH
Q 012506 293 QVSDGAGAVLLMKRSVAMRKGLPILGVFRTFA---------AV-GVD--P-----------AI----M----GVGPAVAI 341 (462)
Q Consensus 293 ~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~---------~~-~~~--p-----------~~----~----~~~~~~Ai 341 (462)
..+|||+|+||.+.+... +..++....... .. ... | +. . ......++
T Consensus 152 ~~gdgaaA~ll~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (324)
T cd00827 152 TLGDGAAAMLVSRNPGIL--AAGIVSTHSTSDPGYDFSPYPVMDGGYPKPCKLAYAIRLTAEPAGRAVFEAAHKLIAKVV 229 (324)
T ss_pred cccCceEEEEEecCcccc--cCCceeeeeecccccccCccceeccCCCcchhhhhhcceeecCCccchHHHHhHHHHHHH
Confidence 258999999998765421 111111111000 00 000 0 00 0 01124678
Q ss_pred HHHHHHcCCCCCCccEEEecCCCH-HHHHHHHHHcCCCCCCCCCCCC--ccccCCccchHHHHHHHHHHHH
Q 012506 342 PAAVKSAGLQLDDIDLFEINEAFA-SQFVYCRNKLGLDPEKINVNGG--ALAIGHPLGTTGARCVATLLHE 409 (462)
Q Consensus 342 ~~aL~~AGl~~~DID~~eihdafa-~~~~~~~e~LGl~~~~vn~~GG--~~a~Ghp~gatG~~~~~~~~~q 409 (462)
+++|++.|++ +|||+|-+|+.+. .......++|+++++++..+.- .--+||...++-...+.+++.+
T Consensus 230 ~~~l~~~~~~-~~i~~~~~h~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~ 299 (324)
T cd00827 230 RKALDRAGLS-EDIDYFVPHQPNGKKILEAVAKKLGGPPEKASQTRWILLRRVGNMYAASILLGLASLLES 299 (324)
T ss_pred HHHHHHcccc-cccceeeccCchHHHHHHHHHHHccchHhhhccchhhHHHHhCchHHHHHHHHHHHHHhc
Confidence 8899999999 9999999999999 7778888999998877776431 3448888877766666665543
|
They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues. |
| >PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.6e-19 Score=185.81 Aligned_cols=243 Identities=18% Similarity=0.178 Sum_probs=166.0
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHH
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIK 153 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~ 153 (462)
+..+|+.+|+++||+++|+++++||.+++++..++.. .+..+..++..+|+. .++++++.+|+|++.||..|+++|+
T Consensus 94 ~~~~la~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~-~p~~a~~v~~~Lgl~--~~~~~v~~aCasg~~al~~A~~~i~ 170 (372)
T PRK07515 94 IQAEMGVAAARQALARAGRTAEDIDAVIVACSNMQRA-YPAMAIEIQQALGIE--GFAFDMNVACSSATFGIQTAANAIR 170 (372)
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCC-CcHHHHHHHHhcCCC--CcEEEecchhHHHHHHHHHHHHHHH
Confidence 3568999999999999999999999999998765543 455667788899993 7899999999999999999999999
Q ss_pred ccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCC
Q 012506 154 AGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGK 233 (462)
Q Consensus 154 sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~ 233 (462)
+|.+|.+|++|+|.++...
T Consensus 171 ~g~~~~vLvv~~e~~s~~~------------------------------------------------------------- 189 (372)
T PRK07515 171 SGSARRVLVVNPEICSGHL------------------------------------------------------------- 189 (372)
T ss_pred cCCCCEEEEEeeecccccc-------------------------------------------------------------
Confidence 9999999999999986510
Q ss_pred CccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcC
Q 012506 234 FKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKG 313 (462)
Q Consensus 234 f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g 313 (462)
|+. | +. .+ ...+|||+|+||++.+.+.+.+
T Consensus 190 -------------~~~-----------d---------------~~----~~-------~lfGDgAaA~vL~~~~~~~~~~ 219 (372)
T PRK07515 190 -------------NFR-----------D---------------RD----SH-------FIFGDVATAVIVERADTATSAG 219 (372)
T ss_pred -------------ccc-----------C---------------CC----CC-------EEecCccEEEEEeeccccccCC
Confidence 000 0 00 01 1258999999999876543222
Q ss_pred -CCceEEEEEEEE-------ec----cCCCC----------CCcc--------HHHHHHHHHHHcCCCCCCccEEEecCC
Q 012506 314 -LPILGVFRTFAA-------VG----VDPAI----------MGVG--------PAVAIPAAVKSAGLQLDDIDLFEINEA 363 (462)
Q Consensus 314 -~~~~~~i~g~~~-------~~----~~p~~----------~~~~--------~~~Ai~~aL~~AGl~~~DID~~eihda 363 (462)
..++........ .+ .++.. .+.. ...+++++|+++||+++|||+|.+|+.
T Consensus 220 ~~~il~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~dId~~~~Hq~ 299 (372)
T PRK07515 220 GFEILGTRLFTQFSNNIRNNFGFLNRADPEGIGARDKLFVQEGRKVFKEVCPMVAEHIVEHLAENGLTPADVKRFWLHQA 299 (372)
T ss_pred CceEEEEEeecccccceecCCCCCCCCCccccccccceEEeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCC
Confidence 233332211100 00 01110 1111 246889999999999999999999999
Q ss_pred CHHHHHHHHHH-cCCCC--CCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeE-EEEEE
Q 012506 364 FASQFVYCRNK-LGLDP--EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGA-AAVFE 437 (462)
Q Consensus 364 fa~~~~~~~e~-LGl~~--~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~-A~v~~ 437 (462)
...+.....+. ||+.. ++...+ .--+||...++-...+.++...+ +.+ ++.|... .|.|+.+ +++|+
T Consensus 300 ~~~~~d~~~~~llg~~~~~~~~~~~--~~~~GNt~sasi~~~L~~~~~~~--~~G--d~vll~~-~G~G~~~~~~ll~ 370 (372)
T PRK07515 300 NINMNQLIGKKVLGRDATPEEAPVI--LDEYANTSSAGSIIAFHKHSDDL--AAG--DLGVICS-FGAGYSIGSVIVR 370 (372)
T ss_pred CHHHHHHHHHHhccCCCChhhceEe--HHhcCCchhhHHHHHHHHHhccC--CCC--CEEEEEE-ecccHHHHHHHhc
Confidence 99988777777 67643 332222 34488988888766666553322 123 5555543 4555443 33443
|
|
| >PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.6e-18 Score=173.57 Aligned_cols=244 Identities=19% Similarity=0.187 Sum_probs=167.7
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHH
Q 012506 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAA 150 (462)
Q Consensus 71 ~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~ 150 (462)
++.++.+|+.+|++++|+++|+++++||.|++++..++.. .+..+..++..+|++ +.++++++.+|+++++||..|..
T Consensus 48 ~~e~~~~la~~Aa~~aL~~ag~~~~~Id~li~~t~~~d~~-~p~~a~~v~~~Lg~~-~~~~~di~~~C~g~~~aL~~A~~ 125 (326)
T PRK05963 48 PDETLSDLAASAGDMALSDAGIERSDIALTLLATSTPDHL-LPPSAPLLAHRLGLQ-NSGAIDLAGACAGFLYALVLADG 125 (326)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCC-CCcHHHHHHHHhCCC-CCceeeccchhhHHHHHHHHHHH
Confidence 5778999999999999999999999999999999887654 567788899999996 67999999999999999999999
Q ss_pred HHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Q 012506 151 AIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 230 (462)
Q Consensus 151 ~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~ 230 (462)
+|++|. +.+|+++.|.++...
T Consensus 126 ~l~~~~-~~aLVv~~d~~s~~~---------------------------------------------------------- 146 (326)
T PRK05963 126 FVRAQG-KPVLVVAANILSRRI---------------------------------------------------------- 146 (326)
T ss_pred HHHcCC-CeEEEEEechhhccC----------------------------------------------------------
Confidence 999985 899999999875410
Q ss_pred cCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHH
Q 012506 231 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 310 (462)
Q Consensus 231 ~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~ 310 (462)
+|. + + . .....+|||+|+||.+.+...
T Consensus 147 ----------------~~~------------~---------------~-------~---~~~lfGDgA~A~ll~~~~~~~ 173 (326)
T PRK05963 147 ----------------NMA------------E---------------R-------A---SAVLFADAAGAVVLAPSAKAN 173 (326)
T ss_pred ----------------Ccc------------c---------------c-------C---ceEEEeecceEEEEEecCCCC
Confidence 000 0 0 0 011258999999998643210
Q ss_pred hcCCCceE-EEEEEEE--------ec--cCC--------C-CC--Ccc----------HHHHHHHHHHHcCCCCCCccEE
Q 012506 311 RKGLPILG-VFRTFAA--------VG--VDP--------A-IM--GVG----------PAVAIPAAVKSAGLQLDDIDLF 358 (462)
Q Consensus 311 ~~g~~~~~-~i~g~~~--------~~--~~p--------~-~~--~~~----------~~~Ai~~aL~~AGl~~~DID~~ 358 (462)
.+ ++. .+...+. .+ ..| + .+ ..+ ...+++++|+++|++++|||+|
T Consensus 174 -~~--~l~~~~~t~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~did~~ 250 (326)
T PRK05963 174 -SG--VLGSQLISDGSHYDLIKIPAGGSARPFAPERDASEFLMTMQDGRAVFTEAVRMMSGASQNVLASAAMTPQDIDRF 250 (326)
T ss_pred -Cc--eEEEEEEEcCCCCCeEEeCCCCcCCCCcccccccccceEecCCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEE
Confidence 01 111 1111000 00 001 0 01 001 1357778999999999999999
Q ss_pred EecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeE-EEEE
Q 012506 359 EINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGA-AAVF 436 (462)
Q Consensus 359 eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~-A~v~ 436 (462)
-+|+.+..+...+.+.||++++++..+ .--+||..+++-...+.+++.+=+-+.| ++.|... .|.|+.+ +++|
T Consensus 251 ~~h~~~~~~~~~~~~~l~l~~~k~~~~--l~~~Gn~~sas~~~~L~~~~~~~~~~~G--d~vll~~-~G~G~~~~~~ll 324 (326)
T PRK05963 251 FPHQANARIVDKVCETIGIPRAKAAST--LETYGNSSAATIPLSLSLANLEQPLREG--ERLLFAA-AGAGMTGGAVVM 324 (326)
T ss_pred EeCCCCHHHHHHHHHHcCCCHHHhhhh--HHhhCcHHHHHHHHHHHHHHHhCCCCCC--CEEEEEE-EehhhhheeeEE
Confidence 999999999999999999999886533 3448887666644444333321111123 4555543 5666665 3444
|
|
| >PRK06840 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.79 E-value=1e-17 Score=170.18 Aligned_cols=247 Identities=20% Similarity=0.140 Sum_probs=167.1
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEe-ccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHH
Q 012506 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGT-VLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVA 149 (462)
Q Consensus 71 ~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~-~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa 149 (462)
.+.+..+|+.+|++++|+++|+++++||.+++++ ..++.. .+..+..++..+|++ ..+++.++.+|++++.+|..|.
T Consensus 49 ~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~-~p~~a~~l~~~lGl~-~~~~~~v~~~C~~~~~al~~A~ 126 (339)
T PRK06840 49 PEDHTSDMAIAAAKPALKQAGVDPAAIDVVIYIGSEHKDYP-VWSSAPKIQHEIGAK-NAWAFDIMAVCASFPIALKVAK 126 (339)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCC-CCchHHHHHHHhCCC-CcccccccccchHHHHHHHHHH
Confidence 5678999999999999999999999999998654 333332 445678899999995 6889999999999999999999
Q ss_pred HHHHc-cCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Q 012506 150 AAIKA-GFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAA 228 (462)
Q Consensus 150 ~~I~s-G~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a 228 (462)
++|++ |.++.+|+++.|.++.....+
T Consensus 127 ~~l~~~g~~~~~Lvv~~~~~s~~~~~~----------------------------------------------------- 153 (339)
T PRK06840 127 DLLYSDPSIENVLLVGGYRNSDLVDYD----------------------------------------------------- 153 (339)
T ss_pred HHHhcCCCccEEEEEeecccccccCcC-----------------------------------------------------
Confidence 99999 999999999999875511000
Q ss_pred HHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHH
Q 012506 229 TAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSV 308 (462)
Q Consensus 229 ~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~ 308 (462)
+|.. ...| ..+|||+|+||.+.+.
T Consensus 154 ------------------~~~~--------------------------~~~~------------~~GDgAaA~ll~~~~~ 177 (339)
T PRK06840 154 ------------------NPRT--------------------------RFMF------------NFAAGGSAALLKKDAG 177 (339)
T ss_pred ------------------CCCe--------------------------eeec------------cCCCceeEEEEEecCC
Confidence 0000 0001 1589999999986432
Q ss_pred HHhcCCCceEE-EEEEE----Ee-----cc----C---------------CCCCC--------ccHHHHHHHHHHHcCCC
Q 012506 309 AMRKGLPILGV-FRTFA----AV-----GV----D---------------PAIMG--------VGPAVAIPAAVKSAGLQ 351 (462)
Q Consensus 309 A~~~g~~~~~~-i~g~~----~~-----~~----~---------------p~~~~--------~~~~~Ai~~aL~~AGl~ 351 (462)
+..++.. +...+ .. +. . +..+. .....+++++|+++|++
T Consensus 178 ----~~~il~~~~~t~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~ 253 (339)
T PRK06840 178 ----KNRILGSAIITDGSFSEDVRVPAGGTKQPASPETVENRQHYLDVIDPESMKERLDEVSIPNFLKVIREALRKSGYT 253 (339)
T ss_pred ----CCceEEEEEEEcCCccceEEecCCCcCCCCcccccccccceEEEcCcHHHHHHhHhhHHHHHHHHHHHHHHHcCCC
Confidence 1112210 00000 00 00 0 00000 01236788999999999
Q ss_pred CCCccEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeeccccee
Q 012506 352 LDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMG 431 (462)
Q Consensus 352 ~~DID~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g 431 (462)
++|||+|-+|.........+.+.||++++++. + .--+||...++-...+.+++.+=+.+.| ++.+... .|.|+.
T Consensus 254 ~~did~~~~h~~~~~~~~~~~~~Lgl~~~~~~-~--~~~~Gn~~sas~~~~L~~~~~~~~~~~G--d~ill~~-~G~G~s 327 (339)
T PRK06840 254 PKDIDYLAILHMKRSAHIALLEGLGLTEEQAI-Y--LDEYGHLGQLDQILSLHLALEQGKLKDG--DLVVLVS-AGTGYT 327 (339)
T ss_pred HHHCCEEEECCcCHHHHHHHHHHcCCCHHHeE-e--HHhccchhhhhHHHHHHHHHHcCCCCCC--CEEEEEE-Eehhhh
Confidence 99999999999988887888999999988764 2 3358998877766555555432111233 4555543 566666
Q ss_pred EEEEEEe
Q 012506 432 AAAVFER 438 (462)
Q Consensus 432 ~A~v~~~ 438 (462)
...++.+
T Consensus 328 ~~~~~l~ 334 (339)
T PRK06840 328 WAATVIR 334 (339)
T ss_pred eeEEEEE
Confidence 6444433
|
|
| >PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Probab=99.78 E-value=1e-17 Score=173.44 Aligned_cols=216 Identities=21% Similarity=0.307 Sum_probs=155.4
Q ss_pred HHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccc
Q 012506 115 ECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLL 194 (462)
Q Consensus 115 ~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (462)
.+..++..+|+ +.|.++++.+|+|+++||..|+++|++|++|++||+|+|.++....
T Consensus 139 ~a~~ia~~lgl--~Gp~~~i~~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~~~~~~~--------------------- 195 (392)
T PRK09185 139 LADFLRAYLGL--SGPAYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDSLCRLTL--------------------- 195 (392)
T ss_pred HHHHHHHHhCC--CCCcccccChhHHHHHHHHHHHHHHHcCCCCEEEEeeccccChHHH---------------------
Confidence 56778899999 5799999999999999999999999999999999999997543100
Q ss_pred cHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHh
Q 012506 195 PMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELA 274 (462)
Q Consensus 195 ~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~ 274 (462)
.+ +.. .. .+ + ++
T Consensus 196 -~~------------------------~~~-~~-----~l------------------------~-~~------------ 207 (392)
T PRK09185 196 -NG------------------------FNS-LE-----SL------------------------S-PQ------------ 207 (392)
T ss_pred -HH------------------------HHh-cc-----cc------------------------C-CC------------
Confidence 00 000 00 00 0 00
Q ss_pred cCCCcccC--CCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEecc-----CCCCCCccHHHHHHHHHHH
Q 012506 275 KLKPVFKK--DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV-----DPAIMGVGPAVAIPAAVKS 347 (462)
Q Consensus 275 ~~~p~f~p--~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~-----~p~~~~~~~~~Ai~~aL~~ 347 (462)
..+| |+. +|.+ ++||++++||++++ +. .++|.|++.... .|+..+.+...+++++|++
T Consensus 208 ~~~P-fd~~~~G~~-------~gEGaa~vVLe~~~-----~~--~~~I~g~g~~~d~~~~~~~~~~~~~~~~a~~~Al~~ 272 (392)
T PRK09185 208 PCRP-FSANRDGIN-------IGEAAAFFLLERED-----DA--AVALLGVGESSDAHHMSAPHPEGLGAILAMQQALAD 272 (392)
T ss_pred ccCC-CcCCCCccc-------eeceEEEEEEEEcC-----CC--cEEEEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 0122 322 2322 78999999999871 22 247888877542 2333344556899999999
Q ss_pred cCCCCCCccEEEecCCCHH----HHHHHHH-HcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC-------
Q 012506 348 AGLQLDDIDLFEINEAFAS----QFVYCRN-KLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR------- 415 (462)
Q Consensus 348 AGl~~~DID~~eihdafa~----~~~~~~e-~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~------- 415 (462)
+||+++|||+++.|.+.+. .|...+. .+|- ..||+...+. +||+++|+|+.+++.++.+|+++--
T Consensus 273 Agl~~~dId~v~~hgtgt~~~D~~E~~al~~~f~~-~~pv~s~K~~--~Gh~~~AaG~~~l~~~~~~l~~~~ip~~~~~~ 349 (392)
T PRK09185 273 AGLAPADIGYINLHGTATPLNDAMESRAVAAVFGD-GVPCSSTKGL--TGHTLGAAGAVEAAICWLALRHGLPPHGWNTG 349 (392)
T ss_pred cCCCHHHccEEEeCCCCCcCCCHHHHHHHHHHhCC-CCceeCCCcc--cccChhhcchHHHHHHHHHHhcCCCCCCCCCC
Confidence 9999999999999999885 4554444 4453 3356666555 7999999999999999999987520
Q ss_pred ------------------CCcEEEEEeecccceeEEEEEEec
Q 012506 416 ------------------DCRFGVISMCIGTGMGAAAVFERG 439 (462)
Q Consensus 416 ------------------~~~~gl~~~~~G~G~g~A~v~~~~ 439 (462)
..++.++.....||.+.++||++.
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~l~~s~gfgG~n~~lvl~~~ 391 (392)
T PRK09185 350 QPDPALPPLYLVENAQALAIRYVLSNSFAFGGNNCSLIFGRA 391 (392)
T ss_pred CCCCCCCccccCCCCccCCCCEEEEeCccCCceeEEEEEEeC
Confidence 137888888888889999999864
|
|
| >cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs | Back alignment and domain information |
|---|
Probab=99.77 E-value=6.1e-18 Score=173.30 Aligned_cols=250 Identities=17% Similarity=0.149 Sum_probs=171.7
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEec-CCCchHHHHHHHHHHH
Q 012506 73 TYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADVAAA 151 (462)
Q Consensus 73 ~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~-~~CsSgl~Ai~~Aa~~ 151 (462)
.++.+|+.+|++++|+++|+++++||.+++++..+ .. .+..+..++..+|++..+++++++ .+|++++.||..|.++
T Consensus 83 ~~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~-~~-~P~~a~~i~~~lgl~~~~~~~dv~~~~C~~~~~al~~A~~~ 160 (361)
T cd00831 83 EEARELAEEAARGALDEAGLRPSDIDHLVVNTSTG-NP-TPSLDAMLINRLGLRPDVKRYNLGGMGCSAGAIALDLAKDL 160 (361)
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCC-CC-CCCHHHHHHHHhCCCcccchhccccccchhHHHHHHHHHHH
Confidence 36899999999999999999999999999988765 33 577788999999996568999998 8999999999999999
Q ss_pred HHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHc
Q 012506 152 IKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAA 231 (462)
Q Consensus 152 I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~ 231 (462)
|++|..+.+|++++|.+|... .
T Consensus 161 ~~~~~~~~aLvv~~e~~s~~~-~--------------------------------------------------------- 182 (361)
T cd00831 161 LEANPGARVLVVSTELCSLWY-R--------------------------------------------------------- 182 (361)
T ss_pred HHHCCCCEEEEEEeeccccee-C---------------------------------------------------------
Confidence 999999999999999987610 0
Q ss_pred CCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHh
Q 012506 232 GKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMR 311 (462)
Q Consensus 232 g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~ 311 (462)
+. | +.+. .......+|||+|+||.+.+....
T Consensus 183 ----------------~~-----------d-------~~~~---------------~~~~~lfGDgaaA~ll~~~~~~~~ 213 (361)
T cd00831 183 ----------------GP-----------D-------HRSM---------------LVGNALFGDGAAAVLLSNDPRDRR 213 (361)
T ss_pred ----------------CC-----------C-------cHHH---------------hhhhhhccCCceEEEEEcCCCccc
Confidence 00 0 0000 001122589999999998654321
Q ss_pred cCCCceEEEEEEEEe---------c-----------cCCCCCC---ccHHHHHHHHHHHc--CCCCCCccEEEecCCCHH
Q 012506 312 KGLPILGVFRTFAAV---------G-----------VDPAIMG---VGPAVAIPAAVKSA--GLQLDDIDLFEINEAFAS 366 (462)
Q Consensus 312 ~g~~~~~~i~g~~~~---------~-----------~~p~~~~---~~~~~Ai~~aL~~A--Gl~~~DID~~eihdafa~ 366 (462)
. ..+...+.++... . .++.... .....+++++|+++ |++++|||+|-+|.....
T Consensus 214 ~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~~~L~~~~~g~~~~did~~~~H~~~~~ 292 (361)
T cd00831 214 R-ERPLFELVRAASTLLPDSEDAMGWHLGEEGLTFVLSRDVPRLVEKNLERVLRKLLARLGIGLFKLAFDHWCVHPGGRA 292 (361)
T ss_pred c-cccceeeecccceeeecCCCceEEEEEcceEEEEeChhHHHHHHHHHHHHHHHHhccccCCCccccceEEEECCCChH
Confidence 0 0011111111000 0 0010000 12245788999999 999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCC-CCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEE
Q 012506 367 QFVYCRNKLGLDPEKINVN-GGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAV 435 (462)
Q Consensus 367 ~~~~~~e~LGl~~~~vn~~-GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v 435 (462)
+.....+.||++++++..+ --.--+||..+++-...+.+++.+-+-+.+ ++.+... .|.|.....+
T Consensus 293 i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L~~~~~~g~~~~G--d~vll~~-~G~G~s~~~~ 359 (361)
T cd00831 293 VLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLAYMEAKGRVKRG--DRGLLIA-FGPGFTCESA 359 (361)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHHHHHHHhCCCCCC--CEEEEEE-EcCCceeeee
Confidence 8888899999999886421 002348998888866666666544222233 4554443 4666555443
|
PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions. |
| >COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.6e-16 Score=181.58 Aligned_cols=266 Identities=22% Similarity=0.245 Sum_probs=196.1
Q ss_pred HHHHHHHHHHHHcCCCccccC----cEEEEeccCCCCcc------------------ccHHHHHHHHcCCCCCcceEEec
Q 012506 78 LLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGSQR------------------ASECRMAAFYAGFPETVPVRTVN 135 (462)
Q Consensus 78 L~~~A~~~Al~~agl~~~~Id----~vivG~~~~~~~~~------------------~~~a~~~a~~~Glp~~~p~~~v~ 135 (462)
|+.+.+.+||+|+|++++.+. +|++|....++... ...+..++..+++ ++|.+.|+
T Consensus 94 llLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Risy~l~l--~GPs~~vd 171 (1061)
T COG3321 94 LLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRISYVLGL--SGPSVTVD 171 (1061)
T ss_pred HHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHHHHHHHhcC--CCCCcccc
Confidence 899999999999999999888 57777665554211 1246678899999 79999999
Q ss_pred CCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHH
Q 012506 136 RQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQD 215 (462)
Q Consensus 136 ~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~ 215 (462)
++|||++.|+++|+..|++|++|++|++|+..+-.....+. +++
T Consensus 172 taCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~--------------------------------~~~---- 215 (1061)
T COG3321 172 TACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYL--------------------------------FSA---- 215 (1061)
T ss_pred chhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcceee--------------------------------eec----
Confidence 99999999999999999999999999999988644211100 000
Q ss_pred HHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC--CCCcccCCCCC
Q 012506 216 QAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK--DGTTTAGNSSQ 293 (462)
Q Consensus 216 ~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p--~g~~t~~~~s~ 293 (462)
.| .+++|..+++ |+. +|++
T Consensus 216 ---------------~g------------------------~ls~~g~c~~-------------fd~~adG~v------- 236 (1061)
T COG3321 216 ---------------GG------------------------MLSPDGRCKA-------------FDADADGYV------- 236 (1061)
T ss_pred ---------------cc------------------------CcCCCCccee-------------cccCCCCEE-------
Confidence 00 1223333322 443 4554
Q ss_pred cCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCC--C---CccHHHHHHHHHHHcCCCCCCccEEEecCCCHHH-
Q 012506 294 VSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAI--M---GVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ- 367 (462)
Q Consensus 294 ~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~--~---~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~- 367 (462)
.++|+++|+|.+.+.|.+-|.+|++.|.|.+++...-.. . ..+-..+++++|+++|+++++|+|+|.|..-+..
T Consensus 237 ~geG~g~vvLKrl~~A~~dgd~IyavI~gsavn~dG~~~gltaP~~~aQ~~v~~~al~~a~i~p~tv~yvEaHgTGT~lG 316 (1061)
T COG3321 237 RGEGAGVVVLKRLSDAERDGDRIYAVIRGSAVNQDGRSNGLTAPNLEAQADVIREALADAGIDPATVQYVEAHGTGTPLG 316 (1061)
T ss_pred EeeeEEEEEEEEhHHHHhCCCeEEEEEEeeeeccCCCcCCCCCCCHHHHHHHHHHHHHhcCCCcccCcEEEecCCCCCCc
Confidence 689999999999999999999999999999987643222 1 1233679999999999999999999999877653
Q ss_pred ---HHHHH-HHcCCC-CCCCCCCCCccc-cCCccchHHHHHHHHHHHHHHhcC---------------------------
Q 012506 368 ---FVYCR-NKLGLD-PEKINVNGGALA-IGHPLGTTGARCVATLLHEMKRRG--------------------------- 414 (462)
Q Consensus 368 ---~~~~~-e~LGl~-~~~vn~~GG~~a-~Ghp~gatG~~~~~~~~~qL~~~~--------------------------- 414 (462)
+..++ ..+|-. +......|..+. +||+-.|.|+..++..+.+|+++.
T Consensus 317 DpiE~~aL~~v~~~~~~~~~c~iGSvKsNiGH~~~AaGiagliK~~Lal~~~~ip~~l~~~~~np~i~~~~sp~~v~~~~ 396 (1061)
T COG3321 317 DPIEANALGAVYGEGAPAQPCAIGSVKSNIGHLEAAAGIAGLIKTALALKHGYIPPTLHFDTPNPEIDFDSSPFVVPTEA 396 (1061)
T ss_pred CHHHHHHHHHHhccCCCCCcccccccccccccHHHHHHHHHHHHHHHhhhcCccCCcCCCCCCCcCCccccCCeEeecCC
Confidence 22222 334322 233334444444 999999999999999999999862
Q ss_pred ------CCCcEEEEEeecccceeEEEEEEecc
Q 012506 415 ------RDCRFGVISMCIGTGMGAAAVFERGD 440 (462)
Q Consensus 415 ------~~~~~gl~~~~~G~G~g~A~v~~~~~ 440 (462)
+.++++=+++.+-+|.++-+|+|-..
T Consensus 397 ~~W~~~~~prrAgvssfG~gGtNaHvIlEe~~ 428 (1061)
T COG3321 397 TPWPTGGGPRRAGVSSFGFGGTNAHVILEEAP 428 (1061)
T ss_pred cCCCCCCCCceeeeeccCCCCCceEEEEeecC
Confidence 02567777777777888999998543
|
|
| >PLN03169 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.7e-17 Score=170.01 Aligned_cols=250 Identities=16% Similarity=0.153 Sum_probs=167.6
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc-ceEEecCCCchHHHHHHHHHH
Q 012506 72 DTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV-PVRTVNRQCSSGLQAVADVAA 150 (462)
Q Consensus 72 d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~-p~~~v~~~CsSgl~Ai~~Aa~ 150 (462)
+++..+|+.+|+++||+++|+++++||.||+++.. +.. .|..+..++..+|++..+ .++.++.+|++++++|..|..
T Consensus 103 ~e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~t-~~~-~P~~a~~l~~~LGl~~~~~~~~d~~~gC~g~~~aL~~A~~ 180 (391)
T PLN03169 103 NEAVTQMAVEASLACIKEWGRPVSDITHLVYVSSS-EAR-LPGGDLYLAKQLGLSPDVQRVMLYFLGCSGGVAGLRVAKD 180 (391)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECcC-CCC-CCcHHHHHHHHhCcCCcceeeecccChhHHHHHHHHHHHH
Confidence 45678899999999999999999999999998874 444 577788999999997544 478999999999999999999
Q ss_pred HHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Q 012506 151 AIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 230 (462)
Q Consensus 151 ~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~ 230 (462)
.|++|..+.||++++|..|.....
T Consensus 181 ~~~~~~~~~vLvv~~e~~s~~~~~-------------------------------------------------------- 204 (391)
T PLN03169 181 IAENNPGSRVLLTTSETTILGFRP-------------------------------------------------------- 204 (391)
T ss_pred HHHhCCCCeEEEEEEEcChhhccC--------------------------------------------------------
Confidence 999999999999999997541100
Q ss_pred cCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHH
Q 012506 231 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 310 (462)
Q Consensus 231 ~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~ 310 (462)
|.. + ..++ ...++..+|||+|+||...+...
T Consensus 205 -----------------~~~----------~-------~~~d---------------~~~~~lFGDGAaA~vl~~~~~~~ 235 (391)
T PLN03169 205 -----------------PSP----------D-------RPYD---------------LVGAALFGDGAAAVIIGADPIPV 235 (391)
T ss_pred -----------------CCc----------c-------chhh---------------hhhhhhccCceEEEEEecCCCcc
Confidence 000 0 0000 00112358999999998654320
Q ss_pred hcCCCceEEEEEEEEecc---C--------CC----CCCc--------cHHHHHHHHHHHcCCCCCCcc--EEEecCCCH
Q 012506 311 RKGLPILGVFRTFAAVGV---D--------PA----IMGV--------GPAVAIPAAVKSAGLQLDDID--LFEINEAFA 365 (462)
Q Consensus 311 ~~g~~~~~~i~g~~~~~~---~--------p~----~~~~--------~~~~Ai~~aL~~AGl~~~DID--~~eihdafa 365 (462)
. .++.-.+........ + +. .++. .....++++|+++|++++||| +|-+|+++.
T Consensus 236 -~-~~~~~~l~~~~~~~ip~~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~~~did~~~~v~Hq~n~ 313 (391)
T PLN03169 236 -S-ESPFFELHTAIQQFLPGTEKTIDGRLTEEGINFKLGRELPQKIEDNIEGFCKKLMKKAGLVEKDYNDLFWAVHPGGP 313 (391)
T ss_pred -c-CCcceEEEeeeeeEcCCCccccCceecCCceEEEECcHHHHHHHHHHHHHHHHHHHHcCCCCCCCCcceEEecCCCH
Confidence 0 011112222221100 0 00 0010 123467889999999999999 999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCC-CCccccCCccchHHHHHHHHHHHHHHhc---CCCCcEEEEEeecccceeEE
Q 012506 366 SQFVYCRNKLGLDPEKINVN-GGALAIGHPLGTTGARCVATLLHEMKRR---GRDCRFGVISMCIGTGMGAA 433 (462)
Q Consensus 366 ~~~~~~~e~LGl~~~~vn~~-GG~~a~Ghp~gatG~~~~~~~~~qL~~~---~~~~~~gl~~~~~G~G~g~A 433 (462)
.+.....+.|||+++++..+ --.--+||...+|-...+.+++.+-+.+ .+ +++|... .|.|+.+.
T Consensus 314 ~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~~~~~~~~~~~~~g--d~~ll~a-fG~G~s~~ 382 (391)
T PLN03169 314 AILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYMREELKKKGEEDE--EWGLILA-FGPGITFE 382 (391)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHHHHHhhcccCCCCC--cEEEEEE-EcccHhHH
Confidence 99999999999999876521 0022378877777555555544332211 23 6666653 56665553
|
|
| >PLN03171 chalcone synthase-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.1e-16 Score=165.95 Aligned_cols=253 Identities=17% Similarity=0.122 Sum_probs=170.3
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc-ceEEecCCCchHHHHHHHHHHH
Q 012506 73 TYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV-PVRTVNRQCSSGLQAVADVAAA 151 (462)
Q Consensus 73 ~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~-p~~~v~~~CsSgl~Ai~~Aa~~ 151 (462)
.+..+|+.+|+++||+++|+++++||.|++++.++.. .|..+..++..+|++..+ ..+.++.+|++++++|..|.++
T Consensus 106 ~~a~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~--~P~~a~~v~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~l 183 (399)
T PLN03171 106 DAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAH--IPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGAAALRLAKDL 183 (399)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCC--CCchHHHHHHHhCCCcccceeeccCCccHHHHHHHHHHHHH
Confidence 3788999999999999999999999999999988765 577888999999996443 2556777999999999999999
Q ss_pred HHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHc
Q 012506 152 IKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAA 231 (462)
Q Consensus 152 I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~ 231 (462)
|++|.++.||++++|.+|....
T Consensus 184 i~~~~~~~vLVv~~e~~s~~~~---------------------------------------------------------- 205 (399)
T PLN03171 184 AENNRGARVLVVAAEITLLLFN---------------------------------------------------------- 205 (399)
T ss_pred HHhCCCCeEEEEEEeccccccC----------------------------------------------------------
Confidence 9999999999999999876210
Q ss_pred CCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHh
Q 012506 232 GKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMR 311 (462)
Q Consensus 232 g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~ 311 (462)
|. |+ .+.+. ....+..+|||+|+||.+.+...+
T Consensus 206 ----------------~~-----------d~-----~~~~~---------------~v~~~LFGDGAaA~vl~~~~~~~~ 238 (399)
T PLN03171 206 ----------------GP-----------DE-----GCFQT---------------LLNQGLFGDGAAAVIVGADADAAE 238 (399)
T ss_pred ----------------CC-----------Cc-----ccHHh---------------hhccccccCccEEEEEecCCCCCC
Confidence 00 00 00111 112233699999999987543211
Q ss_pred cCCCceEEEEEEEEeccCCC----------------CCC-ccHHHHH----HHHHHH---------cCCCCCCccEEEec
Q 012506 312 KGLPILGVFRTFAAVGVDPA----------------IMG-VGPAVAI----PAAVKS---------AGLQLDDIDLFEIN 361 (462)
Q Consensus 312 ~g~~~~~~i~g~~~~~~~p~----------------~~~-~~~~~Ai----~~aL~~---------AGl~~~DID~~eih 361 (462)
. ....+..+.... .|. .+. ......+ ++++++ +|++++|||++ +|
T Consensus 239 ~---~~~~l~~~~~~~-~p~~~~~~~~~~~~~g~~~~~~~~~vp~~i~~~l~~~l~~~l~~~~~~~~g~~~~di~~~-~H 313 (399)
T PLN03171 239 R---PLFEIVSAAQAI-IPESDDAINMHFTEGGLDGNIGTRQVPGLIGDNIERCLLDAFAPLLGGDGGAEWNDLFWA-VH 313 (399)
T ss_pred C---CceEEEEeeeEE-ecCCchheEEEEEcCCceEEECchhHHHHHHHHHHHHHHHHHHhhcccccCCCcccceEE-Ec
Confidence 1 111333222211 110 011 1112233 555554 58999999998 89
Q ss_pred CCCHHHHHHHHHHcCCCCCCCCCC-CCccccCCccchHHHHHHHHHHHHHHhc--CC-CCcEEEEEeecccceeEE-EEE
Q 012506 362 EAFASQFVYCRNKLGLDPEKINVN-GGALAIGHPLGTTGARCVATLLHEMKRR--GR-DCRFGVISMCIGTGMGAA-AVF 436 (462)
Q Consensus 362 dafa~~~~~~~e~LGl~~~~vn~~-GG~~a~Ghp~gatG~~~~~~~~~qL~~~--~~-~~~~gl~~~~~G~G~g~A-~v~ 436 (462)
+.+..+...+.++|||+++++..+ --.--+||..++|-...+.+++.+.+.. .| +.++.|... .|.|+.+. ++|
T Consensus 314 q~~~~il~~v~~~Lgl~~ek~~~s~~~l~~yGNtssaSip~~L~~~~~~~~~~~~~G~~~d~vll~~-fG~Glt~~~~ll 392 (399)
T PLN03171 314 PGSSAILDQVDAALGLEPEKLAASRRVLSDYGNMFGATVIFALDELRRQMEEAAAAGAWPELGVMMA-FGPGLTVDAMLL 392 (399)
T ss_pred CCcHHHHHHHHHHcCCCHHHhHHHHHHHHHhCcchhhhHHHHHHHHHhhHhhcCCCCCCcceEEEEE-EcccHHHHHHHh
Confidence 999999999999999999987521 1123489999988777777777666421 11 014555543 56565553 344
Q ss_pred Ee
Q 012506 437 ER 438 (462)
Q Consensus 437 ~~ 438 (462)
+.
T Consensus 393 ~~ 394 (399)
T PLN03171 393 HA 394 (399)
T ss_pred hc
Confidence 43
|
|
| >PLN03168 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.5e-15 Score=155.23 Aligned_cols=254 Identities=15% Similarity=0.108 Sum_probs=169.6
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc-ceEEecCCCchHHHHHHHHHHHH
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV-PVRTVNRQCSSGLQAVADVAAAI 152 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~-p~~~v~~~CsSgl~Ai~~Aa~~I 152 (462)
...+|+.+|+++||+++|++++|||.||+++.++.. .|..+..++..+|++..+ .++.++.+|++++++|..|...|
T Consensus 100 ~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~--~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~g~~~aL~~A~~~i 177 (389)
T PLN03168 100 QVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGVN--MPGADHALAKLLGLKPTVKRVMMYQTGCFGGASVLRVAKDLA 177 (389)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCC--CccHHHHHHHHhCcCCcceeeeeeCCccHHHHHHHHHHHHHH
Confidence 457899999999999999999999999999988743 577899999999996443 48999999999999999999999
Q ss_pred HccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcC
Q 012506 153 KAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAG 232 (462)
Q Consensus 153 ~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g 232 (462)
++|....||++++|.+|....
T Consensus 178 ~~~~~~~VLVV~~E~~S~~~~----------------------------------------------------------- 198 (389)
T PLN03168 178 ENNKGARVLAVASEVTAVTYR----------------------------------------------------------- 198 (389)
T ss_pred HhCCCCEEEEEEEehhhhhcc-----------------------------------------------------------
Confidence 999999999999999875110
Q ss_pred CCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhc
Q 012506 233 KFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRK 312 (462)
Q Consensus 233 ~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~ 312 (462)
+|. + ...+++ -.++..+|||+|+||...+... .
T Consensus 199 --------------~~~------------~-----~~~~~~---------------~~~~LFGDGAaAvvl~~~~~~~-~ 231 (389)
T PLN03168 199 --------------APS------------E-----NHLDGL---------------VGSALFGDGAGVYVVGSDPKPE-V 231 (389)
T ss_pred --------------Ccc------------c-----ccHHHH---------------hccccccCccEEEEEecCCCCc-c
Confidence 000 0 000000 0122368999999998743211 0
Q ss_pred CCCceEEEEEEEEeccC------CC---CCCc--------------cHHHHHHHHHHHcCCCCCCccEEEecCCCHHHHH
Q 012506 313 GLPILGVFRTFAAVGVD------PA---IMGV--------------GPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFV 369 (462)
Q Consensus 313 g~~~~~~i~g~~~~~~~------p~---~~~~--------------~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~ 369 (462)
. .++-.+..+.....+ +. ..+. .....+.++|+..|+...|+|+|-+|+.......
T Consensus 232 ~-~~~~~~~~~~~~~~p~s~~~~~~~~~~~g~~~~l~~~vp~~i~~~~~~~l~~~l~~~~~~~~d~~~~v~Hqgg~~Il~ 310 (389)
T PLN03168 232 E-KALFEVHWAGETILPESDGAIDGHLTEAGLIFHLMKDVPGLISKNIEKFLNEARKCVGSPDWNEMFWAVHPGGPAILD 310 (389)
T ss_pred C-CcceEEEeeeeEEEcCCCCccCceEecCceEEEECHHHHHHHHHHHHHHHHHHHHhcCCCccccceEEecCCcHHHHH
Confidence 0 121123222111000 00 0000 0134556677788888888999999999999999
Q ss_pred HHHHHcCCCCCCCCCC-CCccccCCccchHHHHHHHHHHHHHHhcC-----CCCcEEEEEeecccceeEE-EEEE
Q 012506 370 YCRNKLGLDPEKINVN-GGALAIGHPLGTTGARCVATLLHEMKRRG-----RDCRFGVISMCIGTGMGAA-AVFE 437 (462)
Q Consensus 370 ~~~e~LGl~~~~vn~~-GG~~a~Ghp~gatG~~~~~~~~~qL~~~~-----~~~~~gl~~~~~G~G~g~A-~v~~ 437 (462)
...++|||+++++-.+ .-+--+||...+|-...+-++..+-.+++ .+.+++|... .|.|+.+. ++|+
T Consensus 311 ~v~~~Lgl~~ek~~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~g~~~~~~g~~~~ll~a-fGpG~t~~~~llr 384 (389)
T PLN03168 311 QVEAKLKLTKDKMQGSRDILSEFGNMSSASVLFVLDQIRQRSVKMGASTLGEGSEFGFFIG-FGPGLTLEVLVLR 384 (389)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHhCccHhhhHHHHHHHHHHHHhhcCCCCCCCCccEEEEEE-Ecchhhhhhhhhe
Confidence 9999999999887532 11233788888876666655544311221 1115667654 56666653 3444
|
|
| >PLN02854 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.67 E-value=6.2e-15 Score=155.28 Aligned_cols=94 Identities=18% Similarity=0.257 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEec-CCCchHHHHHHHHHHHHH
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADVAAAIK 153 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~-~~CsSgl~Ai~~Aa~~I~ 153 (462)
.+.+...+++++|+++|++|+|||.||+. .++... .|..+.+++.++|++.++.+++++ .+|++++.+|..|.++|+
T Consensus 188 a~~v~~~~~~~lL~kaGi~p~dID~LIv~-cS~~~p-~PSlAa~I~n~LGlr~~i~afdLsgmGCSggl~aL~lA~~lL~ 265 (521)
T PLN02854 188 AEAVMFGALDSLFSKTGVKPRDIGILIVN-CSLFNP-TPSLSAMIVNHYKLRTDIKSYNLGGMGCSAGLISIDLANDLLK 265 (521)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEE-CCCCCC-CCCHHHHHHHHhCCCCCceEEecccchhhhHHHHHHHHHHHHH
Confidence 45677788999999999999999999985 445443 678899999999997688999998 899999999999999999
Q ss_pred ccCCCEEEEEeecCCCC
Q 012506 154 AGFYDIGIGAGLESMTV 170 (462)
Q Consensus 154 sG~~d~vLv~G~E~ms~ 170 (462)
+|....+||+++|.+|.
T Consensus 266 ~~~~~~aLVVstE~~S~ 282 (521)
T PLN02854 266 ANPNSYAVVVSTENITL 282 (521)
T ss_pred hCCCCeEEEEEEeeeec
Confidence 99999999999999873
|
|
| >PLN03170 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=4.9e-16 Score=160.92 Aligned_cols=256 Identities=13% Similarity=0.090 Sum_probs=169.0
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc-ceEEecCCCchHHHHHHHHHHHHH
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV-PVRTVNRQCSSGLQAVADVAAAIK 153 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~-p~~~v~~~CsSgl~Ai~~Aa~~I~ 153 (462)
..+|+.+|+++||+++|++++|||.||+++.++.. .|..+..++..+|++..+ .++.++.+|++++.+|..|.+.|+
T Consensus 106 a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~--~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~G~~~aL~~A~~l~~ 183 (401)
T PLN03170 106 VPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVD--MPGADYQLTKMLGLRPSVNRLMMYQQGCFAGGTVLRVAKDLAE 183 (401)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCC--CChHHHHHHHHhCcCcccHHHHhhcChhHHHHHHHHHHHHHHH
Confidence 45699999999999999999999999998876532 577889999999996443 478999999999999999999999
Q ss_pred ccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCC
Q 012506 154 AGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGK 233 (462)
Q Consensus 154 sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~ 233 (462)
+|....||++++|.+|.....
T Consensus 184 ~~~~~~vLVV~~E~~S~~~~~----------------------------------------------------------- 204 (401)
T PLN03170 184 NNRGARVLVVCSEITAVTFRG----------------------------------------------------------- 204 (401)
T ss_pred cCCCCeEEEEEEehhhhccCC-----------------------------------------------------------
Confidence 999999999999998751100
Q ss_pred CccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcC
Q 012506 234 FKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKG 313 (462)
Q Consensus 234 f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g 313 (462)
|. |+ ..+++ ..++..+|||+|+||...+... .
T Consensus 205 --------------~~-----------~~------~~~~~---------------~~~~LFGDGAaAvVl~~~~~~~-~- 236 (401)
T PLN03170 205 --------------PS-----------ES------HLDSM---------------VGQALFGDGAAAVIVGADPDER-V- 236 (401)
T ss_pred --------------cc-----------cc------hhhhh---------------hhhhhhhceeEEEEEecCCccc-c-
Confidence 00 00 00000 0112258999999998743211 0
Q ss_pred CCceEEEEEEEEeccC------CCC---CC--------------ccHHHHHHHHHHHcCCCCCCccEEEecCCCHHHHHH
Q 012506 314 LPILGVFRTFAAVGVD------PAI---MG--------------VGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVY 370 (462)
Q Consensus 314 ~~~~~~i~g~~~~~~~------p~~---~~--------------~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~ 370 (462)
..+..++.+....-.+ +.. .+ ......++++|+++|++.+|||+|-+|.....+...
T Consensus 237 ~~~~~~l~~~~~~~~p~~~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~v~~~L~~~gl~~~di~~~v~Hqgg~~il~~ 316 (401)
T PLN03170 237 ERPLFQLVSASQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERSLEEAFKPLGITDYNSIFWVAHPGGPAILDQ 316 (401)
T ss_pred cCCceEEeeccceEecCCcccccceEEcCCeEEEEehHHHHHHHHHHHHHHHHHHHhcCCCccccCeEEecCCcHHHHHH
Confidence 1111123322111000 000 00 011347778899999999999999999999999999
Q ss_pred HHHHcCCCCCCCCCC-CCccccCCccchHHHHHHHHHHHHHHhcC----CC-CcEEEEEeecccceeE-EEEEEecc
Q 012506 371 CRNKLGLDPEKINVN-GGALAIGHPLGTTGARCVATLLHEMKRRG----RD-CRFGVISMCIGTGMGA-AAVFERGD 440 (462)
Q Consensus 371 ~~e~LGl~~~~vn~~-GG~~a~Ghp~gatG~~~~~~~~~qL~~~~----~~-~~~gl~~~~~G~G~g~-A~v~~~~~ 440 (462)
+.+.||++++++..+ --+--+||...+|-...+-+++++...++ ++ .+++|... .|.|+.+ +++|+...
T Consensus 317 v~~~Lgl~~~~~~~s~~~l~~~GNtsSasv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~a-fGpG~t~~~~ll~~~~ 392 (401)
T PLN03170 317 VEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGFDWGVLFG-FGPGLTVETVVLHSVP 392 (401)
T ss_pred HHHHcCCChHHHHHHHHHHHHhCccHHhHHHHHHHHHHHhHhhcCCCCCCCCccEEEEEE-eCchHhHHhHHheecc
Confidence 999999999886421 11233777777775544444433221221 11 14666643 5666665 44666533
|
|
| >PLN03172 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=2e-15 Score=155.90 Aligned_cols=254 Identities=15% Similarity=0.091 Sum_probs=169.1
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcc-eEEecCCCchHHHHHHHHHHHHH
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP-VRTVNRQCSSGLQAVADVAAAIK 153 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p-~~~v~~~CsSgl~Ai~~Aa~~I~ 153 (462)
..+|+.+|+++||+++|+++++||.||+++.++.. .|..+..++..+|++..+. .+.++.+|++++.+|..|.+.|+
T Consensus 102 a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~--~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~ 179 (393)
T PLN03172 102 VPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVD--MPGADYQLTKLLGLKPSVKRFMMYQQGCFAGGTVLRLAKDLAE 179 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCc--CchHHHHHHHHhCCCCCceEEeeeCCchHHHHHHHHHHHHHHH
Confidence 45899999999999999999999999998887643 5678889999999975553 46889999999999999999999
Q ss_pred ccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCC
Q 012506 154 AGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGK 233 (462)
Q Consensus 154 sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~ 233 (462)
+|....|||+++|.+|....
T Consensus 180 ~~~~~~vLVV~~E~~S~~~~------------------------------------------------------------ 199 (393)
T PLN03172 180 NNAGSRVLVVCSEITAVTFR------------------------------------------------------------ 199 (393)
T ss_pred cCCCCeEEEEEEehhhhhhc------------------------------------------------------------
Confidence 99999999999999874100
Q ss_pred CccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcC
Q 012506 234 FKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKG 313 (462)
Q Consensus 234 f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g 313 (462)
+| ++ .+.+.+. .++..+|||+|+||...+... .
T Consensus 200 -------------~~------------~d-----~~~~~~v---------------~~~LFGDGAaAvVl~~~~~~~-~- 232 (393)
T PLN03172 200 -------------GP------------SD-----THLDSLV---------------GQALFGDGAAAVIIGADPDTK-I- 232 (393)
T ss_pred -------------cc------------cc-----ccHHhhh---------------ccchhcCceEEEEEecCCCCc-c-
Confidence 00 00 0011110 112258999999998743211 0
Q ss_pred CCceEEEEEEEEe---ccCC------CCCC--------------ccHHHHHHHHHHHcCCCCCCccEEEecCCCHHHHHH
Q 012506 314 LPILGVFRTFAAV---GVDP------AIMG--------------VGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVY 370 (462)
Q Consensus 314 ~~~~~~i~g~~~~---~~~p------~~~~--------------~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~ 370 (462)
.++.-++.++... ..+. ...| ......+++.|++.|++..|||+|-+|.....+...
T Consensus 233 ~~~~~~i~~~~~~~~~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~~~~~L~~~gl~~~di~~~~~Hqgg~~Il~~ 312 (393)
T PLN03172 233 ERPLFEIVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFAPIGINDWNSIFWIAHPGGPAILDQ 312 (393)
T ss_pred cCceeEEeeeccEEecCCcccccceEEcCCcEEEEechHHHHHHHHHHHHHHHHhhhcCCCccccceEEecCCcHHHHHH
Confidence 1122234433211 1100 0001 012356678899999999999999999999999999
Q ss_pred HHHHcCCCCCCCCCC-CCccccCCccchHHHHHHHHHHHHHHhcC----CC-CcEEEEEeecccceeEEE-EEEe
Q 012506 371 CRNKLGLDPEKINVN-GGALAIGHPLGTTGARCVATLLHEMKRRG----RD-CRFGVISMCIGTGMGAAA-VFER 438 (462)
Q Consensus 371 ~~e~LGl~~~~vn~~-GG~~a~Ghp~gatG~~~~~~~~~qL~~~~----~~-~~~gl~~~~~G~G~g~A~-v~~~ 438 (462)
..+.||++++++-.+ --+--+||...+|-...+-++.++-..++ ++ .+++|... .|.|+.+.+ +|+.
T Consensus 313 v~~~Lgl~~~~~~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~a-fGpG~t~~~~ll~~ 386 (393)
T PLN03172 313 VEIKLDLKEEKLRATRHVLSDYGNMSSACVLFILDEMRKKSIEEGKGSTGEGLEWGVLFG-FGPGLTVETVVLHS 386 (393)
T ss_pred HHHHcCCCHHHHHHHHHHHHHhCccHHhHHHHHHHHHHhhhhhcCCCCCCCCcceEEEEE-eCCcceeeeeeeEe
Confidence 999999999876542 11233777777764444444432211111 11 15667654 677777644 5544
|
|
| >PLN03173 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.8e-15 Score=153.74 Aligned_cols=247 Identities=16% Similarity=0.126 Sum_probs=165.2
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc-ceEEecCCCchHHHHHHHHHHHHH
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV-PVRTVNRQCSSGLQAVADVAAAIK 153 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~-p~~~v~~~CsSgl~Ai~~Aa~~I~ 153 (462)
..+|+.+|+++||+++|+++++||.|++.+.++.. .|..+..++..+|++..+ ..+.++.+|+++..+|..|.+.|+
T Consensus 102 a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~--~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~ 179 (391)
T PLN03173 102 VPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVD--MPGADYQLTKLLGLRSSVKRFMMYQQGCFAGGTVLRLAKDLAE 179 (391)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCc--ccHHHHHHHHHhCCCccceeeehhcCccHHHHHHHHHHHHHHH
Confidence 45899999999999999999999999998887643 567888999999996544 356789999999999999999999
Q ss_pred ccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCC
Q 012506 154 AGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGK 233 (462)
Q Consensus 154 sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~ 233 (462)
++..+.|||+++|.+|.....
T Consensus 180 ~~~~~~vLVV~~E~~S~~~~~----------------------------------------------------------- 200 (391)
T PLN03173 180 NNKGARVLVVCSEITAVTFRG----------------------------------------------------------- 200 (391)
T ss_pred hCCCCeEEEEEEehhhhhhCC-----------------------------------------------------------
Confidence 999999999999998741000
Q ss_pred CccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcC
Q 012506 234 FKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKG 313 (462)
Q Consensus 234 f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g 313 (462)
|. + | ..+.+ -.++..+|||+|+||...+. .+
T Consensus 201 --------------~~------------d--~---~~~~~---------------v~~~LFGDGAaAvvl~~~~~---~~ 231 (391)
T PLN03173 201 --------------PS------------D--T---HLDSL---------------VGQALFGDGAAAIIIGSDPV---LG 231 (391)
T ss_pred --------------cc------------c--c---chhhh---------------hhhhhhcCceEEEEEeCCCC---CC
Confidence 00 0 0 00000 01122589999999986432 12
Q ss_pred C-CceEEEEEEEEe---ccC-----------------CCCCC---ccHHHHHHHHHHHcCCCCCCccEEEecCCCHHHHH
Q 012506 314 L-PILGVFRTFAAV---GVD-----------------PAIMG---VGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFV 369 (462)
Q Consensus 314 ~-~~~~~i~g~~~~---~~~-----------------p~~~~---~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~ 369 (462)
. .+.-++.++... ..+ ++.+. ......++++|++.|++.+|||+|-+|+.......
T Consensus 232 ~~~~~~~l~~~~~~~~~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~~~~~i~~~L~~~gl~~~di~~~v~Hqgg~~Il~ 311 (391)
T PLN03173 232 VEKPLFELVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNVEKSLTEAFKPLGISDWNSLFWIAHPGGPAILD 311 (391)
T ss_pred cCCcceEEEeeeeEEecCCccceeeEEEcCceEEEEecHHHHHHHHHHHHHHHHHHHhcCCCccccCeEEECCCcHHHHH
Confidence 1 111122222210 000 11110 01235778899999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCCC-CCccccCCccchHHHHHHHHHHHHHHhcC----C-CCcEEEEEeecccceeE
Q 012506 370 YCRNKLGLDPEKINVN-GGALAIGHPLGTTGARCVATLLHEMKRRG----R-DCRFGVISMCIGTGMGA 432 (462)
Q Consensus 370 ~~~e~LGl~~~~vn~~-GG~~a~Ghp~gatG~~~~~~~~~qL~~~~----~-~~~~gl~~~~~G~G~g~ 432 (462)
...+.|||+++++-.+ --+--+||...+|-...+-+++++-++++ + +.+++|... .|.|+.+
T Consensus 312 ~v~~~LgL~~ekl~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~~~~~~g~~~~~~l~~a-fGpG~t~ 379 (391)
T PLN03173 312 QVEAKLALKPEKLRATRHVLSEYGNMSSACVLFILDEMRKKSAEDGLKSTGEGLEWGVLFG-FGPGLTV 379 (391)
T ss_pred HHHHHcCCChHHHHHHHHHHHHhCcchhhHHHHHHHHHHHhhhhcCCCCCCCCcceEEEEE-eCchHHH
Confidence 9999999999876432 11223778777775555555543211111 1 125666654 5656544
|
|
| >TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.5e-14 Score=149.07 Aligned_cols=111 Identities=8% Similarity=0.055 Sum_probs=96.5
Q ss_pred cEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcc
Q 012506 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP 130 (462)
Q Consensus 51 ~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p 130 (462)
..++.|.+++.+... ..+++..+|+.+|++++|+++ ++++||.+++++..+... .+..+..++..+|++..++
T Consensus 29 ~~~~~g~G~~~~~~~----~~~ed~~~la~~Aa~~aL~~a--~~~~Id~li~~t~s~~~~-~~s~a~~v~~~Lgl~~~~~ 101 (379)
T TIGR01835 29 EKFHIGIGQKKMAVP----PIDEDIVTMAASAAKPILDRN--DKQKIDMVIFGTESGIDQ-SKAAAVYVHGLLGLQPFCR 101 (379)
T ss_pred HHHHhhcCceEEeeC----CCCCCHHHHHHHHHHHHHHhC--CHhhCCEEEEEeCCCCCC-CCCHHHHHHHHhCCCCCce
Confidence 346667777777653 257778999999999999998 899999999999887754 5678889999999976689
Q ss_pred eEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCC
Q 012506 131 VRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESM 168 (462)
Q Consensus 131 ~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~m 168 (462)
++.+..+|++++.||..|.+.|++|..+.+||+++|..
T Consensus 102 ~~dv~~aC~gg~~aL~~A~~~i~s~~~~~aLVv~~D~a 139 (379)
T TIGR01835 102 SFELKQACYGATAALQMAKGHVALSPDRKVLVIASDIA 139 (379)
T ss_pred EEEeccccHHHHHHHHHHHHHHHcCCCCeEEEEEeehh
Confidence 99999999999999999999999999999999999873
|
This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event. |
| >PLN02377 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.63 E-value=3.1e-14 Score=149.90 Aligned_cols=96 Identities=18% Similarity=0.215 Sum_probs=86.9
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEec-CCCchHHHHHHHHHHH
Q 012506 73 TYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADVAAA 151 (462)
Q Consensus 73 ~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~-~~CsSgl~Ai~~Aa~~ 151 (462)
....+++..|++++|+++|++|+|||.+|+ +.++... .|..+.+++.++|++.++..++++ .+|++++.+|..|.++
T Consensus 170 ~ea~~l~~~A~~~aL~kaGi~p~dID~LVv-~cS~~~~-~PSlaa~V~~~LGlr~~v~afdL~gmGCsggl~aL~lA~~l 247 (502)
T PLN02377 170 EEAEQVMFGALDNLFANTNVNPKDIGILVV-NCSLFNP-TPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAVDLAKDM 247 (502)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEE-ECCCCCC-CCcHHHHHHHHhCCCCCCeEEecccchhhHHHHHHHHHHHH
Confidence 356889999999999999999999999987 6666544 678899999999997688999999 6999999999999999
Q ss_pred HHccCCCEEEEEeecCCCC
Q 012506 152 IKAGFYDIGIGAGLESMTV 170 (462)
Q Consensus 152 I~sG~~d~vLv~G~E~ms~ 170 (462)
|++|....+||+++|.+|.
T Consensus 248 l~~~~~~~aLVVstE~~S~ 266 (502)
T PLN02377 248 LQVHRNTYAVVVSTENITQ 266 (502)
T ss_pred HHcCCCCEEEEEEEecccc
Confidence 9999999999999999886
|
|
| >TIGR02845 spore_V_AD stage V sporulation protein AD | Back alignment and domain information |
|---|
Probab=99.59 E-value=9.3e-14 Score=137.12 Aligned_cols=91 Identities=19% Similarity=0.299 Sum_probs=80.7
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHH
Q 012506 72 DTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAA 151 (462)
Q Consensus 72 d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~ 151 (462)
+.+..+|+.+|+++||+++|++++|||.+++|+.. . ....+..++..+|+ |.+.++.+|+|+.+||..|+.+
T Consensus 47 EkAe~eLa~eAa~~ALekAGL~~~DID~IIvGdl~-~---Q~~~As~vA~~LGI----P~fdV~~ACSTf~~AL~lAa~l 118 (327)
T TIGR02845 47 EKAERKLMEDAVNLALKKANLKKDDVDFFLAGDLL-N---QIITANFVARDLGI----PFLGLYGACSTSMETLALGAML 118 (327)
T ss_pred chhHHHHHHHHHHHHHHHcCCCHHHCCEEEEeCCC-C---cccHHHHHHHHhCC----CEEEEeccCHHHHHHHHHHHHH
Confidence 45778899999999999999999999999999742 1 23467788889998 5699999999999999999999
Q ss_pred HHccCCCEEEEEeecCCCC
Q 012506 152 IKAGFYDIGIGAGLESMTV 170 (462)
Q Consensus 152 I~sG~~d~vLv~G~E~ms~ 170 (462)
|++|.+|+|||++.|.+|.
T Consensus 119 I~SG~ad~VLVV~Ssh~S~ 137 (327)
T TIGR02845 119 VDGGFADRVLAATSSHYAT 137 (327)
T ss_pred HhCCCCCEEEEEEecccch
Confidence 9999999999999998875
|
Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation. |
| >PLN02932 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.5e-13 Score=144.00 Aligned_cols=94 Identities=14% Similarity=0.256 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEec-CCCchHHHHHHHHHHHHH
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADVAAAIK 153 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~-~~CsSgl~Ai~~Aa~~I~ 153 (462)
..+|+.+|++++|+++|++|++||.+|+.+.++. . .|..+.+++..+|++.++..++++ .+|++++.+|..|.++|+
T Consensus 148 a~~la~~Aa~~aL~~agi~p~dId~lIv~tst~~-~-~Pslaa~V~~~lGlr~~i~~fdL~gmGCSggl~aL~lA~~ll~ 225 (478)
T PLN02932 148 TEEVIIGAVDNLFRNTGISPSDIGILVVNSSTFN-P-TPSLSSILVNKFKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQ 225 (478)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCC-C-CCcHHHHHHHHhCCCCCceEEEeccchhhhHHHHHHHHHHHHH
Confidence 6789999999999999999999999999988776 3 688899999999997689999999 899999999999999999
Q ss_pred ccCCCEEEEEeecCCCC
Q 012506 154 AGFYDIGIGAGLESMTV 170 (462)
Q Consensus 154 sG~~d~vLv~G~E~ms~ 170 (462)
+|....+||+++|.+|.
T Consensus 226 ~~~~~~aLVVstE~~S~ 242 (478)
T PLN02932 226 VHRNTYALVVSTENITQ 242 (478)
T ss_pred cCCCCeEEEEEEeeccc
Confidence 99999999999999987
|
|
| >COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.54 E-value=4.7e-13 Score=134.29 Aligned_cols=234 Identities=21% Similarity=0.293 Sum_probs=176.5
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHH
Q 012506 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAA 150 (462)
Q Consensus 71 ~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~ 150 (462)
.+++...|+++|++++|+++++|+++|+.|++|+-+.... .-..+..++..+|+++...++++..+|-+|..||..|..
T Consensus 47 ~~ED~vTmaveAA~~~l~r~~~D~~~Ig~v~vgTES~~d~-~K~~at~v~~~lg~~~~~~~~d~~~AC~agT~aL~~a~~ 125 (377)
T COG3425 47 WDEDAVTMAVEAARNALKRADIDPSKIGAVIVGSESGPDA-VKPTATIVAEALGLNPSARAADVEFACYAGTAALQAAIG 125 (377)
T ss_pred CchhHHHHHHHHHHHHHhccCCCHHHCceEEEecCCCccc-ccchHHHHHHHhCCCCceehhhHHHHHHHHHHHHHHHHH
Confidence 4778999999999999999999999999999999877654 445678899999998888999999999999999999999
Q ss_pred HHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Q 012506 151 AIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 230 (462)
Q Consensus 151 ~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~ 230 (462)
.|.+|..+.+||+|.|.--..
T Consensus 126 ~v~s~~~~~~LvI~sD~a~~~----------------------------------------------------------- 146 (377)
T COG3425 126 WVESGMISYGLVIGADTAQYA----------------------------------------------------------- 146 (377)
T ss_pred HHHcCCccceEEEeehhhccC-----------------------------------------------------------
Confidence 999999999999999873210
Q ss_pred cCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHH
Q 012506 231 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 310 (462)
Q Consensus 231 ~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~ 310 (462)
|... ..| + .++||+|+|+..-.
T Consensus 147 -----------------~~~~------------------------~E~-------t-------~GAGavA~lIg~n~--- 168 (377)
T COG3425 147 -----------------PGDA------------------------LEY-------T-------AGAGAVAFLIGKNP--- 168 (377)
T ss_pred -----------------CCcc------------------------cCc-------c-------CCCceEEEEEccCC---
Confidence 1000 001 1 37899999987621
Q ss_pred hcCCCceEEEEEEEEecc------CCCCC------C--------ccHHHHHHHHHHHcCCCCCCccEEEecCCCHHHHHH
Q 012506 311 RKGLPILGVFRTFAAVGV------DPAIM------G--------VGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVY 370 (462)
Q Consensus 311 ~~g~~~~~~i~g~~~~~~------~p~~~------~--------~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~ 370 (462)
++++.+.+.+.... .|+.. + .....|++..+++.|++++|.|++-+|.+|+-+..-
T Consensus 169 ----~~~a~~~~~~syt~d~~DFwRp~~~~yp~~dg~~s~~~Y~~~~~~a~~~~~~k~gls~~dfdy~vfH~P~~k~~~k 244 (377)
T COG3425 169 ----PIVAEFEGTGSYTTDTPDFWRPDGQPYPYVDGRFSEPAYFKHVENAAKGYMEKTGLSPDDFDYIVFHQPNGKFPKK 244 (377)
T ss_pred ----CeEEEecCceEEecCCCcccccCCCcccccCceecHHHHHHHHHHHHHHHHHHhCCChhhhCeEEecCCCCchHHH
Confidence 12333333333221 12111 0 012457778889999999999999999999999999
Q ss_pred HHHHcCCCCCCCCCCCCcc-ccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccce
Q 012506 371 CRNKLGLDPEKINVNGGAL-AIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGM 430 (462)
Q Consensus 371 ~~e~LGl~~~~vn~~GG~~-a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~ 430 (462)
.++.||+..++|-++=-.. ..|++..++....++.++.+-+ ..| -++++.+- |.|-
T Consensus 245 a~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~Las~L~~a~-~~G-~rIl~~SY--GSGa 301 (377)
T COG3425 245 AAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGLASLLDNAK-LPG-DRILLFSY--GSGA 301 (377)
T ss_pred HHHHhCccHhhcCccchhhhhcCcccchhHHHHHHHHHhhcC-CCC-CEEEEEee--CCCc
Confidence 9999999977666542222 3899999998888888887766 333 28888874 4443
|
|
| >PLN02577 hydroxymethylglutaryl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.1e-13 Score=142.51 Aligned_cols=110 Identities=15% Similarity=0.202 Sum_probs=92.9
Q ss_pred EEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHH---HHcCCCCCcc
Q 012506 54 IVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAA---FYAGFPETVP 130 (462)
Q Consensus 54 Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a---~~~Glp~~~p 130 (462)
.+|.++..+.-. -.+++..+|+++|++++|+++|+++++||.|++++.++... .+..+..++ ..+|.+ ++.
T Consensus 36 ~~GI~~r~~ava----~~~Ed~~tmA~~AA~~aL~~agid~~~IdllivaTeT~~d~-~ps~A~~v~~ll~~LG~~-~~~ 109 (459)
T PLN02577 36 TIGLGQDCMAFC----TDVEDVISMSLTVVKSLLEKYNIDPKQIGRLEVGSETVIDK-SKSIKTFLMQLFEESGNT-DIE 109 (459)
T ss_pred hhccceeEeccC----CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CCchHHHHHHHHHHhCCC-CcE
Confidence 467777665321 25789999999999999999999999999999999988654 566676664 467874 789
Q ss_pred eEEecCCCchHHHHHHHHHHHHHccCC--CEEEEEeecCCC
Q 012506 131 VRTVNRQCSSGLQAVADVAAAIKAGFY--DIGIGAGLESMT 169 (462)
Q Consensus 131 ~~~v~~~CsSgl~Ai~~Aa~~I~sG~~--d~vLv~G~E~ms 169 (462)
+++++.+|+++.+||..|.+.|++|.. +.+||+|+|.++
T Consensus 110 afDi~~AC~G~~~AL~~A~~~i~sg~~~~~~aLVV~aD~a~ 150 (459)
T PLN02577 110 GVDSTNACYGGTAALLNCVNWVESSSWDGRYGLVVAADSAV 150 (459)
T ss_pred EeehhhhhHHHHHHHHHHHHHHHcCCCCCCeEEEEEechhh
Confidence 999999999999999999999999985 999999999864
|
|
| >PLN02192 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.8e-13 Score=142.58 Aligned_cols=94 Identities=15% Similarity=0.241 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEec-CCCchHHHHHHHHHHHHH
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADVAAAIK 153 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~-~~CsSgl~Ai~~Aa~~I~ 153 (462)
.++++..|+++||+++|++|+|||.+|+.+. +... .|..+.+++.++|++.++.+++++ .+|++++.+|..|.++|+
T Consensus 176 a~~~~~~Aa~~aL~kaGi~p~DIDiLIv~~S-~~~~-~PSlaa~I~n~lGlr~~i~afdLsgmGCSggl~aLdlA~~lL~ 253 (511)
T PLN02192 176 AETVMFGAIDQLLAKTSVKPKDIGILIVNCS-LFNP-TPSLSAMVINHYKLRGNILSYNLGGMGCSAGLISIDLAKHLLQ 253 (511)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEECC-CCCC-CchHHHHHHHHhCCCCCceEEEcccchhhhHHHHHHHHHHHHH
Confidence 5678899999999999999999999988654 4433 678899999999997678999999 699999999999999999
Q ss_pred ccCCCEEEEEeecCCCC
Q 012506 154 AGFYDIGIGAGLESMTV 170 (462)
Q Consensus 154 sG~~d~vLv~G~E~ms~ 170 (462)
++....+||+++|.+|.
T Consensus 254 a~~~~~aLVVstE~~S~ 270 (511)
T PLN02192 254 VHPNSYALVISMENITL 270 (511)
T ss_pred cCCCCeEEEEEEEeccc
Confidence 99999999999999983
|
|
| >PRK08304 stage V sporulation protein AD; Validated | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.2e-12 Score=129.67 Aligned_cols=91 Identities=19% Similarity=0.329 Sum_probs=81.1
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHH
Q 012506 72 DTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAA 151 (462)
Q Consensus 72 d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~ 151 (462)
+.+..+|+.+|+++||+++|++++|||.+++|+... ....+..++..+|+ |++.++.+|+|+..++..|+.+
T Consensus 53 EkAeseLa~eAa~~ALekAGI~~~DID~lI~Gdll~----Q~~sAs~vA~~LGI----Pa~dV~gACST~~~AL~lAa~l 124 (337)
T PRK08304 53 EKAERKMMEDAIQQALQKANLKKSDIDYLLAGDLLN----QIISANFAARELGI----PFLGLYGACSTMMESLALGSML 124 (337)
T ss_pred cccHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCC----CcchHHHHHHHhCC----cEEEEeccCHHHHHHHHHHHHH
Confidence 467788999999999999999999999999997532 23456677888887 7999999999999999999999
Q ss_pred HHccCCCEEEEEeecCCCC
Q 012506 152 IKAGFYDIGIGAGLESMTV 170 (462)
Q Consensus 152 I~sG~~d~vLv~G~E~ms~ 170 (462)
|++|.+|+||+++.|.++.
T Consensus 125 I~SG~ad~VLVV~Ssh~s~ 143 (337)
T PRK08304 125 IDGGFADRVLAATSSHFAT 143 (337)
T ss_pred HhcCCCCEEEEEEcchhhh
Confidence 9999999999999999876
|
|
| >TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade | Back alignment and domain information |
|---|
Probab=99.36 E-value=4.1e-11 Score=125.28 Aligned_cols=108 Identities=16% Similarity=0.161 Sum_probs=91.7
Q ss_pred EEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHH---cCCCCCcc
Q 012506 54 IVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFY---AGFPETVP 130 (462)
Q Consensus 54 Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~---~Glp~~~p 130 (462)
.+|.++..+.-. ..+.+..+|+..|++++|+++++++++||.|++|+.++... .+..+..++.. +|. .++.
T Consensus 33 ~~GI~~rr~av~----~~~Ed~~tma~~AA~~lL~~a~id~~~Id~Liv~TeS~~d~-sps~a~~v~~lL~~lG~-~~~~ 106 (454)
T TIGR01833 33 TIGLGQTKMGFC----TDREDINSLCLTVVSKLMERYNIDYNQIGRLEVGTETIIDK-SKSVKTVLMQLFEESGN-TDVE 106 (454)
T ss_pred eechhheecccC----CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCC-CCchHHHHHHHHHhcCC-CCce
Confidence 477777664211 26789999999999999999999999999999999988765 56677777764 456 4789
Q ss_pred eEEecCCCchHHHHHHHHHHHHHccCC--CEEEEEeecC
Q 012506 131 VRTVNRQCSSGLQAVADVAAAIKAGFY--DIGIGAGLES 167 (462)
Q Consensus 131 ~~~v~~~CsSgl~Ai~~Aa~~I~sG~~--d~vLv~G~E~ 167 (462)
+++++.+|+++.+||..|.+.|++|.. +.+||++.|.
T Consensus 107 ~fDi~~AC~G~t~AL~~A~~~i~s~~~~~~~aLVV~sDi 145 (454)
T TIGR01833 107 GIDTTNACYGGTAALFNAINWIESSSWDGRYALVVAGDI 145 (454)
T ss_pred EEeccccchhHHHHHHHHHHHHHcCCcCCCeEEEEEecc
Confidence 999999999999999999999999974 9999999998
|
Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes. |
| >PLN00415 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.31 E-value=5.3e-11 Score=123.69 Aligned_cols=95 Identities=22% Similarity=0.259 Sum_probs=80.9
Q ss_pred CHHHHHHH-HHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecC-CCchHHHHHHHHHHH
Q 012506 74 YPDDLLAP-VLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNR-QCSSGLQAVADVAAA 151 (462)
Q Consensus 74 ~~~eL~~~-A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~-~CsSgl~Ai~~Aa~~ 151 (462)
...||... |++++|+++|++|++||.+|+. .++... .|..+..+...+|++.++..+.++. +|++++.+|..|.+.
T Consensus 132 ~e~em~i~~A~~~aL~~aGi~p~dID~LIvs-~T~~~~-~Pslaa~l~~~LGLr~~v~~~dL~gmGCsggv~aL~lA~~l 209 (466)
T PLN00415 132 HESELVIFGALNSLFKKTGIEPREVGIFIVN-CSLFNP-NPSLSSMIVNRYKLKTDVKTYNLSGMGCSAGAISVDLATNL 209 (466)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-CcCCCC-CchHHHHHHHHhCCCCCceEEEeccccchHHHHHHHHHHHH
Confidence 44455544 8889999999999999988864 444433 5777888999999987899999997 999999999999999
Q ss_pred HHccCCCEEEEEeecCCCC
Q 012506 152 IKAGFYDIGIGAGLESMTV 170 (462)
Q Consensus 152 I~sG~~d~vLv~G~E~ms~ 170 (462)
++++....+|++++|.+|.
T Consensus 210 l~a~~~~~aLVVs~E~~S~ 228 (466)
T PLN00415 210 LKANPNTYAVIVSTENMTL 228 (466)
T ss_pred HHhCCCCEEEEEEEecccc
Confidence 9999999999999999876
|
|
| >PRK12404 stage V sporulation protein AD; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.5e-10 Score=114.18 Aligned_cols=85 Identities=18% Similarity=0.241 Sum_probs=73.9
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHH
Q 012506 73 TYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAI 152 (462)
Q Consensus 73 ~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I 152 (462)
....+|+.+|+++||+++|++++|||.+++|+.+.. ..++..++..+|+ |.+.|+.+|||+..+|..|+..|
T Consensus 52 kAE~~L~~EA~~~AL~kAGI~~~DID~i~vGdL~nQ----~ipssfvar~LGI----P~~gV~gACSTg~eAL~lAa~~V 123 (334)
T PRK12404 52 KAERKLLEEACSRAIEKAKLRKEDIQFFLAGDLMNQ----ITPTSFAARTLGI----PYLGLFGACSTSMEGLALAALIV 123 (334)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCC----cCcHHHHHHHhCC----CccceeecCHHHHHHHHHHHHHH
Confidence 344589999999999999999999999999998732 2344578888997 55999999999999999999999
Q ss_pred HccCCCEEEEEee
Q 012506 153 KAGFYDIGIGAGL 165 (462)
Q Consensus 153 ~sG~~d~vLv~G~ 165 (462)
++|.+|+||++-.
T Consensus 124 aSG~Ad~VLavts 136 (334)
T PRK12404 124 NSGGAKYVLTGAS 136 (334)
T ss_pred HcCCCCEEEEEeC
Confidence 9999999999754
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.7e-10 Score=126.48 Aligned_cols=236 Identities=23% Similarity=0.279 Sum_probs=155.7
Q ss_pred HHHHHHHHHHHHHHHcCCCccccC----cEEEEeccCCCCc----c--------------ccHHHHHHHHcCCCCCcceE
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGSQ----R--------------ASECRMAAFYAGFPETVPVR 132 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id----~vivG~~~~~~~~----~--------------~~~a~~~a~~~Glp~~~p~~ 132 (462)
-..|+.++..+|+-|+||.|.+.- ++++|...+..++ . ...+..++..+.+ .+|.+
T Consensus 87 q~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytFDf--qGPS~ 164 (2376)
T KOG1202|consen 87 QLRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFDF--QGPSF 164 (2376)
T ss_pred HHHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEEec--cCCch
Confidence 356999999999999999998876 4666665444320 0 1234445555667 68999
Q ss_pred EecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHH
Q 012506 133 TVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRK 212 (462)
Q Consensus 133 ~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre 212 (462)
.++++|+|+++|+..|.+.|++|+||.+||.|+...-.... .+.- .+.|
T Consensus 165 s~DtacsSsl~al~~a~~~~r~gqcd~AiVaG~~liLkPt~-----------------------slQF----lRLg---- 213 (2376)
T KOG1202|consen 165 SVDTACSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPTT-----------------------SLQF----LRLG---- 213 (2376)
T ss_pred hhhhhhHHHHHHHHHHHHhhhccCCchhhhcccceEeccch-----------------------hhHH----HHhc----
Confidence 99999999999999999999999999999999877533100 0000 0000
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCC
Q 012506 213 EQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSS 292 (462)
Q Consensus 213 ~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s 292 (462)
.+++|..++ .||. .+|--
T Consensus 214 --------------------------------------------mls~dGsCk-------------aFDe-----agnGY 231 (2376)
T KOG1202|consen 214 --------------------------------------------MLSPDGSCK-------------AFDE-----AGNGY 231 (2376)
T ss_pred --------------------------------------------CcCCCCccc-------------chhc-----cCCce
Confidence 123333332 2554 23333
Q ss_pred CcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCC------CCCccHHHHHHHHHHHcCCCCCCccEEEecCCCH-
Q 012506 293 QVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPA------IMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFA- 365 (462)
Q Consensus 293 ~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~------~~~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa- 365 (462)
--+||.++|+|.+...|++.=..++ -...+...-. ..|.--...++..|+++||.|+++-|+|.|..-+
T Consensus 232 ~Rseg~~avllqrk~~ArRvYAtil----nartNTDGfKEqGvTfP~G~~Q~qLi~e~Yse~Gl~P~sv~YvEAHGtGTk 307 (2376)
T KOG1202|consen 232 CRSEGVVAVLLQRKSLARRVYATIL----NARTNTDGFKEQGVTFPSGDMQEQLIRETYSEAGLNPESVVYVEAHGTGTK 307 (2376)
T ss_pred eecCceEEEEEehhHHHHHHHHHhh----ccccCCCchhhcCccCCCcHHHHHHHHHHHHhcCCCcccEEEEEeccCCCC
Confidence 4689999999999999988543332 2222111000 1111235688999999999999999999996554
Q ss_pred ---------HHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhc
Q 012506 366 ---------SQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 413 (462)
Q Consensus 366 ---------~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~ 413 (462)
+...+|... -+|+-+..-+..+||+-=|+|.-.++.++..|.+.
T Consensus 308 VGDpQEaN~it~~fC~~R----t~pLLIGSvKSNMGHaEPASGv~alaKillsmE~g 360 (2376)
T KOG1202|consen 308 VGDPQEANGITRFFCATR----TTPLLIGSVKSNMGHAEPASGVCALAKILLSMEEG 360 (2376)
T ss_pred CCChHHhhhHHHHHhhcC----CCceEeeeccccCCCCCccchHHHHHHHHHHHHhC
Confidence 333333311 12322222233389999999999999999988865
|
|
| >PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=99.16 E-value=3.3e-10 Score=110.08 Aligned_cols=92 Identities=24% Similarity=0.389 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHHHHHcCCCccccC-----cEEEEeccCCC-------------C----------ccccHHHHHHHHcCCC
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVG-----DIVVGTVLAPG-------------S----------QRASECRMAAFYAGFP 126 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id-----~vivG~~~~~~-------------~----------~~~~~a~~~a~~~Glp 126 (462)
...|+..++.+||+++|+++..++ ++++|+..++. . .....+..++..+|+
T Consensus 87 ~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl- 165 (254)
T PF00109_consen 87 QSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSAAGRIAILFGL- 165 (254)
T ss_dssp HHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHHHHHHTB-
T ss_pred hhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCcccccccccchhhhcCC-
Confidence 457889999999999999886543 37778766521 0 011246688899999
Q ss_pred CCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCC
Q 012506 127 ETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESM 168 (462)
Q Consensus 127 ~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~m 168 (462)
++|.++++++|+||+.||..|+++|++|++|++||+|+|..
T Consensus 166 -~G~~~tv~~acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~ 206 (254)
T PF00109_consen 166 -RGPSYTVSTACASGLAALEAAYRAIRSGEADVALVGGVDAP 206 (254)
T ss_dssp --SSEEEEE-GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--
T ss_pred -CCccccccccccccccccchhcccccccccccccccccccc
Confidence 68999999999999999999999999999999999999954
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B .... |
| >COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.07 E-value=4.9e-09 Score=101.68 Aligned_cols=247 Identities=18% Similarity=0.182 Sum_probs=166.1
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEe-cCCCchHHHHHHHHHHHHH
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTV-NRQCSSGLQAVADVAAAIK 153 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v-~~~CsSgl~Ai~~Aa~~I~ 153 (462)
...|..++.++||+.+++.++|||.+++.++++-.. |.+-..+...+||+.++.-+-+ .-||..|..++..|++..+
T Consensus 76 a~~l~v~a~r~aL~~~~l~pedId~vv~vtsTG~~~--Ps~dari~~~Lgl~p~~~Rvpv~glGCaaga~glara~~y~r 153 (356)
T COG3424 76 AVPLGVDALRRALDGSPLRPEDIDAVVTVTSTGLAT--PSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARARDYCR 153 (356)
T ss_pred HHHHHHHHHHHHhccCCCCHHHCcEEEEEeeccccC--CChhHHHHhhcCCCCccceeeeecchhhhhhhHHHHHHHHHh
Confidence 467899999999999999999999999999876553 4455567789999766665554 6789999999999999999
Q ss_pred ccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCC
Q 012506 154 AGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGK 233 (462)
Q Consensus 154 sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~ 233 (462)
..--..||++.+|..|-...
T Consensus 154 a~P~~~vlvV~vELCSLt~~------------------------------------------------------------ 173 (356)
T COG3424 154 AAPDANVLVVCVELCSLTYV------------------------------------------------------------ 173 (356)
T ss_pred hCccceEEEEEeeeeeeeee------------------------------------------------------------
Confidence 99899999999999764100
Q ss_pred CccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhc-
Q 012506 234 FKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRK- 312 (462)
Q Consensus 234 f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~- 312 (462)
+. ++++. + .-..+..+||+||+|++-...++..
T Consensus 174 ~~----------d~t~s---------------------~---------------lVgtaLF~DG~AA~vv~gd~~~~~~~ 207 (356)
T COG3424 174 FA----------DDTKS---------------------N---------------LVGTALFGDGAAAVVVSGDRRAEGKR 207 (356)
T ss_pred cC----------CCCcc---------------------c---------------ceeeeeecCCeeEEEEeccccccccC
Confidence 00 00000 0 0112346899999999874443332
Q ss_pred CCCceEEEEEEEEec--cCCCCCC---------------------ccHHHHHHHHHHHcCCCCCCccEEEecCCCHHHHH
Q 012506 313 GLPILGVFRTFAAVG--VDPAIMG---------------------VGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFV 369 (462)
Q Consensus 313 g~~~~~~i~g~~~~~--~~p~~~~---------------------~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~ 369 (462)
...+ .|.+....- ...+.|+ ......+...|...|++.+||+.|-+|-.-....-
T Consensus 208 ~~~p--~i~~s~StL~~dse~~Mgwdv~d~G~~~vlSrdlp~lIe~~l~~~V~~fL~~~~ls~~dI~~w~~HPGG~KVid 285 (356)
T COG3424 208 PLRP--DILDSFSTLYPDSEDIMGWDVGDQGLKVVLSRDLPNLIESYLAPNVTTFLATHGLSIEDIEAWVVHPGGPKVID 285 (356)
T ss_pred CCCc--eecccccccCCccccccceeecCCcEEEEEcCchhHHHHHHhhhhHHHHHHHcCCchhhhceeeeCCCCchHHH
Confidence 2222 122222110 0001111 12356788899999999999999999999888888
Q ss_pred HHHHHcCCCCCCCCCCCCc-cccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEE
Q 012506 370 YCRNKLGLDPEKINVNGGA-LAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAV 435 (462)
Q Consensus 370 ~~~e~LGl~~~~vn~~GG~-~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v 435 (462)
...+.|||+++....+=-. --+||-..+|-+.-+-+.+.+- .+.+ .+||... .|-|.-.=.+
T Consensus 286 a~~~sLgls~e~l~~s~~~L~~~GNMSSatvLfVL~d~l~~~-~~~g--~~Gl~~A-~GPGf~sElv 348 (356)
T COG3424 286 AYEESLGLSPEALELSWDVLREYGNMSSATVLFVLEDTLQKA-PKSG--SRGLMFA-MGPGFCSELV 348 (356)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHhCCccchhhHHHHHHHHHhc-CCCC--cceeeee-cCCcceeeee
Confidence 8889999998744322111 1267777777665555555443 2333 7888865 5665554333
|
|
| >PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species | Back alignment and domain information |
|---|
Probab=98.55 E-value=6.4e-07 Score=87.82 Aligned_cols=94 Identities=19% Similarity=0.251 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEe-cCCCchHHHHHHHHHHHHH
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTV-NRQCSSGLQAVADVAAAIK 153 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v-~~~CsSgl~Ai~~Aa~~I~ 153 (462)
.+.++..+++++|+++|++|+|||.+|+.+.+... -|..+.++..++|+...+..+.+ ..|||+|+-+|..|.++++
T Consensus 83 ae~v~f~av~~LL~ktgv~p~dIdiLVvncs~f~p--tPSLsamIvnr~~mr~di~~~nLsGMGCsAgliai~lA~~lL~ 160 (290)
T PF08392_consen 83 AEMVIFGAVDDLLAKTGVKPSDIDILVVNCSLFNP--TPSLSAMIVNRYGMRSDIKSYNLSGMGCSAGLIAIDLAKDLLQ 160 (290)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCc--CCcHHHHHHHHhCCCcCeeeecccCCcchhhHHHHHHHHHHHH
Confidence 45688899999999999999999999987766433 57789999999999777888876 6689999999999999999
Q ss_pred ccCCCEEEEEeecCCCC
Q 012506 154 AGFYDIGIGAGLESMTV 170 (462)
Q Consensus 154 sG~~d~vLv~G~E~ms~ 170 (462)
.-.-..+|++.+|..|.
T Consensus 161 ~~p~~~ALVVstE~~s~ 177 (290)
T PF08392_consen 161 AHPNSYALVVSTENISA 177 (290)
T ss_pred hCCCcEEEEEEEeeccc
Confidence 99999999999999886
|
The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane |
| >PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.1e-05 Score=78.98 Aligned_cols=84 Identities=18% Similarity=0.289 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHcc
Q 012506 76 DDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAG 155 (462)
Q Consensus 76 ~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG 155 (462)
..|..+|++.+|+++++.++|||.++-|-.+... ..+...+..+++ |.+-+-.+||+...+|.+++..|..|
T Consensus 52 ~~m~~~A~~~al~Ka~l~~~dId~~~aGDLlnQ~----i~s~f~ar~l~i----Pf~GlygACST~~e~l~laa~~vdgg 123 (329)
T PF07451_consen 52 SKMQKEAVELALKKAGLKKEDIDYLFAGDLLNQI----ISSSFAARDLGI----PFLGLYGACSTMMESLALAAMLVDGG 123 (329)
T ss_dssp HHHHHHHHHHHHHHTT--GGG-SEEEEEETTCCC----CHHHHHHHHHT------EEEB--CCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCCHHHCeEEEehhhhhhh----HHHHHHHHhcCC----CccchhhHHHHHHHHHHHHHHHHhCC
Confidence 4588999999999999999999999999876543 234566667777 88899999999999999999999999
Q ss_pred CCCEEEEEeecC
Q 012506 156 FYDIGIGAGLES 167 (462)
Q Consensus 156 ~~d~vLv~G~E~ 167 (462)
.++.+|++-.-.
T Consensus 124 ~a~~vla~tSSH 135 (329)
T PF07451_consen 124 FADYVLAATSSH 135 (329)
T ss_dssp S-SEEEEEEEE-
T ss_pred CcceEEEEeccc
Confidence 999999975433
|
This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A. |
| >PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.3e-06 Score=75.28 Aligned_cols=97 Identities=22% Similarity=0.270 Sum_probs=63.6
Q ss_pred eEEEEEEEEeccC---CCCC---CccHHHHHHHHHHHcCCCCCCccEEEecCCCHHH----HHHHH-HHcCCCC--CCCC
Q 012506 317 LGVFRTFAAVGVD---PAIM---GVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ----FVYCR-NKLGLDP--EKIN 383 (462)
Q Consensus 317 ~~~i~g~~~~~~~---p~~~---~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~----~~~~~-e~LGl~~--~~vn 383 (462)
|+.|.|++..... .... +.+...+++++|+++|++++|||+++.|..-+.. +...+ +.++-.. .++.
T Consensus 1 ya~i~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~ 80 (119)
T PF02801_consen 1 YAVIRGYGVNSDGARSSSLTAPNGAALARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVP 80 (119)
T ss_dssp SEEEEEEEEEE-SSSTSSSSSTTHHHHHHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSE
T ss_pred CEEEEEEEEECCCCCCCCCcCcCHHHHHHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhcccccccccc
Confidence 4678888887633 2211 2345789999999999999999999999988764 33333 3344432 2344
Q ss_pred CCCCccccCCccchHHHHHHHHHHHHHHhc
Q 012506 384 VNGGALAIGHPLGTTGARCVATLLHEMKRR 413 (462)
Q Consensus 384 ~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~ 413 (462)
++.=+..+||+.+++|+.+++.++..|+.+
T Consensus 81 v~s~K~~~Gh~~~asG~~~l~~~~l~l~~~ 110 (119)
T PF02801_consen 81 VGSVKSNIGHTEAASGLLSLAKALLALEHG 110 (119)
T ss_dssp EE-THHHH-B-GGGHHHHHHHHHHHHHHHT
T ss_pred eeccccccccccccchHHHHHHHHHHHhcC
Confidence 444455699999999999999999999875
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A .... |
| >PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2 | Back alignment and domain information |
|---|
Probab=98.24 E-value=2.9e-06 Score=69.20 Aligned_cols=87 Identities=24% Similarity=0.272 Sum_probs=59.1
Q ss_pred HHHcCCCCCCccEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEe
Q 012506 345 VKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISM 424 (462)
Q Consensus 345 L~~AGl~~~DID~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~ 424 (462)
|+++|++++|||+|-+|+.+........+.+|++++++..+ .-.+||...++-...+.+++.+-+-+.+ ++.+...
T Consensus 1 L~~~g~~~~did~~i~hq~~~~~~~~~~~~lgi~~~~~~~~--~~~~Gn~~sa~~~~~L~~~~~~g~~~~G--d~vl~~~ 76 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQASKKILDSIAKRLGIPPERFPDN--LAEYGNTGSASIPINLADALEEGRIKPG--DRVLLVG 76 (90)
T ss_dssp HHHTT--GGGESEEEE-SSSHHHHHHHHHHHTS-GGGBE-T--HHHH-B-GGGHHHHHHHHHHHTTSSCTT--EEEEEEE
T ss_pred CccccCCHHHCCEEEeCCCCHHHHHHHHHHcCCcHHHHHHH--HhccCcchhhhHHHHHHHHHHcCCCCCC--CEEEEEE
Confidence 78999999999999999999999888999999999877654 3559999999877777666653322334 5555543
Q ss_pred ecccceeEEEEE
Q 012506 425 CIGTGMGAAAVF 436 (462)
Q Consensus 425 ~~G~G~g~A~v~ 436 (462)
.|.|+..+.++
T Consensus 77 -~G~G~~~~~~~ 87 (90)
T PF08541_consen 77 -FGAGFSWGAAV 87 (90)
T ss_dssp -EETTTEEEEEE
T ss_pred -EEhhheeEEEE
Confidence 56666665443
|
3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B .... |
| >PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 | Back alignment and domain information |
|---|
Probab=98.09 E-value=1.9e-05 Score=75.39 Aligned_cols=95 Identities=12% Similarity=0.118 Sum_probs=77.5
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEe-cCCCchHHHHHHHHHHHH
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTV-NRQCSSGLQAVADVAAAI 152 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v-~~~CsSgl~Ai~~Aa~~I 152 (462)
...+|+.+|+++||+++|+++++|+.+|+.+.++.. .|..-..+...+||+.++.-+.+ .-||..|..+|..|....
T Consensus 99 ~a~~L~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~~--~PglD~~l~~~LgL~~~v~R~~i~~~GC~gg~~~L~~A~~~~ 176 (226)
T PF00195_consen 99 EAPPLAEEAARKALAEAGLDPSDITHLVTVSCTGIA--APGLDARLINRLGLRPDVQRTPIFGMGCAGGAAGLRRAKDIA 176 (226)
T ss_dssp HHHHHHHHHHHHHHHHHTS-GGGECEEEEEESSSSE--CS-HHHHHHHHHT--TTSEEEEEES-GGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCcccceEEEEecCCcC--CCchhHHHHhcCCCCCCcEEEEEeccchhhHHHHHHHHHHHH
Confidence 467899999999999999999999999999887754 45566688899999877666655 678999999999999999
Q ss_pred HccCCCEEEEEeecCCCC
Q 012506 153 KAGFYDIGIGAGLESMTV 170 (462)
Q Consensus 153 ~sG~~d~vLv~G~E~ms~ 170 (462)
++..-..||++-+|..|-
T Consensus 177 ~~~p~a~VLvv~vElcsl 194 (226)
T PF00195_consen 177 RANPGARVLVVCVELCSL 194 (226)
T ss_dssp HHSTT-EEEEEEEEEGGG
T ss_pred hCCccceEEEEEEEeeEE
Confidence 999999999999999764
|
3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A .... |
| >PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase | Back alignment and domain information |
|---|
Probab=98.04 E-value=1.5e-05 Score=72.67 Aligned_cols=96 Identities=17% Similarity=0.274 Sum_probs=78.6
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCC--CCcceEEecCCCchHHHHHHHH
Q 012506 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFP--ETVPVRTVNRQCSSGLQAVADV 148 (462)
Q Consensus 71 ~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp--~~~p~~~v~~~CsSgl~Ai~~A 148 (462)
.+++...|++.|++.+|++.++++++|+.+++|+-+.--. .-..+..+...+|++ .++..+.+-.+|=+|..||..|
T Consensus 49 ~~ED~vTmA~nAa~~ll~~~~id~~~Ig~l~vgTES~vD~-sKs~~t~v~~ll~~s~~~~~~~~e~k~ACygGTaAL~~a 127 (174)
T PF01154_consen 49 PDEDIVTMAANAAKPLLDRYNIDPDDIGRLIVGTESGVDK-SKSISTYVHQLLGLSGNPDCRGVEMKQACYGGTAALQNA 127 (174)
T ss_dssp TTS-HHHHHHHHHHTTHHHHT-HHHHEEEEEEE-SS-SBS-SS-HHHHHHHHTTTTT-SSSEEEEEESGGGHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHcCCCHHHccEEEEeccccccc-cccHHHHHHHHhCcCCCCceeeeehhhhhHHHHHHHHHH
Confidence 5678999999999999999999999999999998765432 344677888899994 3456788899999999999999
Q ss_pred HHHHHccCCC--EEEEEeecC
Q 012506 149 AAAIKAGFYD--IGIGAGLES 167 (462)
Q Consensus 149 a~~I~sG~~d--~vLv~G~E~ 167 (462)
.+.|+++..+ .+||++.|.
T Consensus 128 ~~~v~s~~~~g~~aLVVasDi 148 (174)
T PF01154_consen 128 VNWVASSPWDGRKALVVASDI 148 (174)
T ss_dssp HHHHCSTTSTTEEEEEEEEEE
T ss_pred HHHHhcCCCCCCeEEEEeccc
Confidence 9999999765 999999887
|
Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A .... |
| >COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.02 E-value=2.2e-06 Score=89.00 Aligned_cols=112 Identities=22% Similarity=0.202 Sum_probs=83.5
Q ss_pred cCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEE
Q 012506 246 VDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAA 325 (462)
Q Consensus 246 ~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~ 325 (462)
+||++++.++ +|++++.+++++.|| +++.+||+.+||++++++++++.+ + .++.|.+.
T Consensus 187 ~np~a~~~~e------------I~~~~v~~~~~~~dp---~~r~d~~~~~dg~a~l~~a~~~~~---g----~~tagnas 244 (392)
T COG0183 187 ANPKAGFFDE------------ITPEDVLNSPVVADP---LRRLDCSPTSDGAAALVPAFEEVG---G----TVTAGNAS 244 (392)
T ss_pred hhHhcCCCCc------------eeeEEecCCceecCC---cccCCCCCChhhhcCceeccccCC---c----eEEEeccc
Confidence 5899886643 566667777777787 999999999999999999997752 1 34444432
Q ss_pred eccCC------------CCCCccHHHHHHHHHHHcCCCCC--CccEEEecCCCHHHHHHHHHHcCCCCC
Q 012506 326 VGVDP------------AIMGVGPAVAIPAAVKSAGLQLD--DIDLFEINEAFASQFVYCRNKLGLDPE 380 (462)
Q Consensus 326 ~~~~p------------~~~~~~~~~Ai~~aL~~AGl~~~--DID~~eihdafa~~~~~~~e~LGl~~~ 380 (462)
.-.+. ..++. ...|..++++.+|+++. ++|++++||+|+..++..+|.|||++.
T Consensus 245 ~i~dga~a~~~~~~~~~~~~~l-~~~A~~~a~~~aGv~p~~~~~~v~av~~~~~~~~l~~~edlgl~e~ 312 (392)
T COG0183 245 GINDGAAALLLMSESKAKELGL-APLAAIRAYAMAGVDPSIMDGPVAAVHDALTIAGLLALEDLGLAEK 312 (392)
T ss_pred ccccHHHHHHHhhHHHHHHCCC-cHHHHHHHHHHhCCCcccccCCHHHHHHHHHHcCCchhhhcCceec
Confidence 11111 11111 23466788999999998 999999999999999999999999864
|
|
| >PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.00052 Score=54.75 Aligned_cols=39 Identities=23% Similarity=0.262 Sum_probs=35.3
Q ss_pred EEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCC
Q 012506 132 RTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTV 170 (462)
Q Consensus 132 ~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~ 170 (462)
++++.+|++++.||..|..+|++|.++.+|+++.|.++.
T Consensus 1 fDi~~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~ 39 (80)
T PF08545_consen 1 FDINQACAGFLYALDVAAALIASGRAKNALVVGGDRLSR 39 (80)
T ss_dssp EEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGG
T ss_pred CcccccchHHHHHHHHHHHHHhhccCCEEEEEeeccccc
Confidence 578999999999999999999999999999999999876
|
The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. |
| >PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.033 Score=55.05 Aligned_cols=68 Identities=19% Similarity=0.351 Sum_probs=53.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec----CCCHHHHHHHHHHcCCCCC--CCCCCCCccccCCccchHHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEIN----EAFASQFVYCRNKLGLDPE--KINVNGGALAIGHPLGTTGARCVATLLHEMK 411 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eih----dafa~~~~~~~e~LGl~~~--~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~ 411 (462)
..+++++|+++|++|+|||++.+| -+.++..-+.++++|+..+ .+|.+| +||++....+.+.++|-
T Consensus 88 f~av~~LL~ktgv~p~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~~~nLsG--------MGCsAgliai~lA~~lL 159 (290)
T PF08392_consen 88 FGAVDDLLAKTGVKPSDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIKSYNLSG--------MGCSAGLIAIDLAKDLL 159 (290)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCeeeecccC--------CcchhhHHHHHHHHHHH
Confidence 468999999999999999999876 4455678889999999876 456543 37887777788887776
Q ss_pred hc
Q 012506 412 RR 413 (462)
Q Consensus 412 ~~ 413 (462)
+.
T Consensus 160 ~~ 161 (290)
T PF08392_consen 160 QA 161 (290)
T ss_pred Hh
Confidence 65
|
The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane |
| >PLN02932 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=94.78 E-value=0.1 Score=55.48 Aligned_cols=69 Identities=17% Similarity=0.264 Sum_probs=52.6
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec----CCCHHHHHHHHHHcCCCC--CCCCCCCCccccCCccchHHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEIN----EAFASQFVYCRNKLGLDP--EKINVNGGALAIGHPLGTTGARCVATLLHEMK 411 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eih----dafa~~~~~~~e~LGl~~--~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~ 411 (462)
..|++++|+++|++++|||++-++ +.+++...+..++||+.+ ..+|.+| .||+|...-+.+..++-
T Consensus 153 ~~Aa~~aL~~agi~p~dId~lIv~tst~~~~Pslaa~V~~~lGlr~~i~~fdL~g--------mGCSggl~aL~lA~~ll 224 (478)
T PLN02932 153 IGAVDNLFRNTGISPSDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIKSLNLGG--------MGCSAGVIAIDAAKSLL 224 (478)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEccCCCCCCcHHHHHHHHhCCCCCceEEEecc--------chhhhHHHHHHHHHHHH
Confidence 478999999999999999999765 567788899999999964 3566643 36777666666666666
Q ss_pred hcC
Q 012506 412 RRG 414 (462)
Q Consensus 412 ~~~ 414 (462)
+..
T Consensus 225 ~~~ 227 (478)
T PLN02932 225 QVH 227 (478)
T ss_pred HcC
Confidence 543
|
|
| >cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=94.02 E-value=0.38 Score=46.17 Aligned_cols=94 Identities=21% Similarity=0.185 Sum_probs=58.1
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----CHHHHHHHHHHcCCC-CCCCCCCCCccccCCccchHHHHH-HHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGLD-PEKINVNGGALAIGHPLGTTGARC-VATLLHEM 410 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda-----fa~~~~~~~e~LGl~-~~~vn~~GG~~a~Ghp~gatG~~~-~~~~~~qL 410 (462)
..|++++|+++|++++|||.+-+... +......+.+.+|+. .+.++++ .+|++... +..+...|
T Consensus 12 ~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~~~~~~~~i~---------~~C~s~~~al~~A~~~i 82 (254)
T cd00327 12 FEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGISGGPAYSVN---------QACATGLTALALAVQQV 82 (254)
T ss_pred HHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCCCCCCcceec---------cHhHHHHHHHHHHHHHH
Confidence 57899999999999999999987643 344456677889995 3333332 24444333 44444444
Q ss_pred HhcCCCCcEEEEEee--cccceeE-EEEEEecccc
Q 012506 411 KRRGRDCRFGVISMC--IGTGMGA-AAVFERGDCA 442 (462)
Q Consensus 411 ~~~~~~~~~gl~~~~--~G~G~g~-A~v~~~~~~~ 442 (462)
+.. ..+++|+..+ .-.|-|. |+||++++..
T Consensus 83 ~~g--~~~~~lv~~~e~~~~gdGAaa~vL~~~~~a 115 (254)
T cd00327 83 QNG--KADIVLAGGSEEFVFGDGAAAAVVESEEHA 115 (254)
T ss_pred HCC--CCCEEEEEecceeeecceEEEEEECcHHHH
Confidence 433 3477777644 2334444 6677776553
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. |
| >PLN02377 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=93.88 E-value=0.19 Score=53.83 Aligned_cols=69 Identities=19% Similarity=0.242 Sum_probs=51.0
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec----CCCHHHHHHHHHHcCCCCC--CCCCCCCccccCCccchHHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEIN----EAFASQFVYCRNKLGLDPE--KINVNGGALAIGHPLGTTGARCVATLLHEMK 411 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eih----dafa~~~~~~~e~LGl~~~--~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~ 411 (462)
..|++++|+++|++++|||++-++ ..+++...+..++||+.+. .+|.+| .||+|...-+.+..+|-
T Consensus 177 ~~A~~~aL~kaGi~p~dID~LVv~cS~~~~~PSlaa~V~~~LGlr~~v~afdL~g--------mGCsggl~aL~lA~~ll 248 (502)
T PLN02377 177 FGALDNLFANTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGG--------MGCSAGVIAVDLAKDML 248 (502)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhCCCCCCeEEeccc--------chhhHHHHHHHHHHHHH
Confidence 468999999999999999999763 2356778889999999753 566643 36777666666666666
Q ss_pred hcC
Q 012506 412 RRG 414 (462)
Q Consensus 412 ~~~ 414 (462)
+..
T Consensus 249 ~~~ 251 (502)
T PLN02377 249 QVH 251 (502)
T ss_pred HcC
Confidence 543
|
|
| >PLN02192 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=93.82 E-value=0.26 Score=52.78 Aligned_cols=75 Identities=16% Similarity=0.211 Sum_probs=53.1
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec----CCCHHHHHHHHHHcCCCC--CCCCCCCCccccCCccchHHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEIN----EAFASQFVYCRNKLGLDP--EKINVNGGALAIGHPLGTTGARCVATLLHEMK 411 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eih----dafa~~~~~~~e~LGl~~--~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~ 411 (462)
..|++++|+++|++++|||++-.+ ..+++...+..++||+.. ..+|.+| .||+|...-+.+..++-
T Consensus 181 ~~Aa~~aL~kaGi~p~DIDiLIv~~S~~~~~PSlaa~I~n~lGlr~~i~afdLsg--------mGCSggl~aLdlA~~lL 252 (511)
T PLN02192 181 FGAIDQLLAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNILSYNLGG--------MGCSAGLISIDLAKHLL 252 (511)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCchHHHHHHHHhCCCCCceEEEccc--------chhhhHHHHHHHHHHHH
Confidence 468999999999999999998765 234567888899999964 3455543 36777766666666666
Q ss_pred hcCCCCcEEE
Q 012506 412 RRGRDCRFGV 421 (462)
Q Consensus 412 ~~~~~~~~gl 421 (462)
+...+ +++|
T Consensus 253 ~a~~~-~~aL 261 (511)
T PLN02192 253 QVHPN-SYAL 261 (511)
T ss_pred HcCCC-CeEE
Confidence 54322 4444
|
|
| >PRK06158 thiolase; Provisional | Back alignment and domain information |
|---|
Probab=93.31 E-value=0.51 Score=48.96 Aligned_cols=98 Identities=16% Similarity=0.142 Sum_probs=60.8
Q ss_pred eEEEEEEEEeccCC--CCCCcc-HHHHHHHHHHHcCCCCCCccEEEecCCCHH-HHHHHHHHcCCCCCCCCCCCCccccC
Q 012506 317 LGVFRTFAAVGVDP--AIMGVG-PAVAIPAAVKSAGLQLDDIDLFEINEAFAS-QFVYCRNKLGLDPEKINVNGGALAIG 392 (462)
Q Consensus 317 ~~~i~g~~~~~~~p--~~~~~~-~~~Ai~~aL~~AGl~~~DID~~eihdafa~-~~~~~~e~LGl~~~~vn~~GG~~a~G 392 (462)
.+.|+|.+...... ...... ...|++++|+.+||+++|||.+-+...+.. ......+.||+.+.++.. -
T Consensus 9 ~vaIvG~g~t~~~~~~~~t~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~~~~~~~~~la~~lGl~~~~~~~-------~ 81 (384)
T PRK06158 9 RTAIVGAATAGLGEAPGLSAMELLAQAAHRALADAGLTMADVDGLFTASPDDALWGLSVAEYLGIRPRFVDG-------T 81 (384)
T ss_pred CEEEEEeeeccceeCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCCCcHHHHHHHcCCCCeeecc-------c
Confidence 34678877654322 111111 257899999999999999998866432211 113466889997654321 1
Q ss_pred CccchHHHHHHHHHHHHHHhcCCCCcEEEEE
Q 012506 393 HPLGTTGARCVATLLHEMKRRGRDCRFGVIS 423 (462)
Q Consensus 393 hp~gatG~~~~~~~~~qL~~~~~~~~~gl~~ 423 (462)
+..++++...+.++...++... +++.|+.
T Consensus 82 ~~g~~s~~~al~~A~~~I~sG~--~d~vLV~ 110 (384)
T PRK06158 82 MIGGSSFLAHLLPAALALEAGL--CDVALIC 110 (384)
T ss_pred cCccHHHHHHHHHHHHHHHcCC--CCEEEEe
Confidence 3446667777777777777543 3777763
|
|
| >PLN02854 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=93.07 E-value=0.4 Score=51.56 Aligned_cols=69 Identities=17% Similarity=0.276 Sum_probs=51.1
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec----CCCHHHHHHHHHHcCCCCC--CCCCCCCccccCCccchHHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEIN----EAFASQFVYCRNKLGLDPE--KINVNGGALAIGHPLGTTGARCVATLLHEMK 411 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eih----dafa~~~~~~~e~LGl~~~--~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~ 411 (462)
-.++.++|+++|++++|||++-++ ..+++...+..++||+.++ .+|.+| .||+|...-+.+..++-
T Consensus 193 ~~~~~~lL~kaGi~p~dID~LIv~cS~~~p~PSlAa~I~n~LGlr~~i~afdLsg--------mGCSggl~aL~lA~~lL 264 (521)
T PLN02854 193 FGALDSLFSKTGVKPRDIGILIVNCSLFNPTPSLSAMIVNHYKLRTDIKSYNLGG--------MGCSAGLISIDLANDLL 264 (521)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCCCceEEeccc--------chhhhHHHHHHHHHHHH
Confidence 358899999999999999999874 2355677888999999643 345532 36787777777776666
Q ss_pred hcC
Q 012506 412 RRG 414 (462)
Q Consensus 412 ~~~ 414 (462)
+..
T Consensus 265 ~~~ 267 (521)
T PLN02854 265 KAN 267 (521)
T ss_pred HhC
Confidence 543
|
|
| >PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 | Back alignment and domain information |
|---|
Probab=92.29 E-value=0.19 Score=48.24 Aligned_cols=43 Identities=28% Similarity=0.291 Sum_probs=33.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCCH----HHHHHHHHHcCCCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAFA----SQFVYCRNKLGLDPE 380 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdafa----~~~~~~~e~LGl~~~ 380 (462)
..|++++|+++|++++|||++..-.|.. .....+++.|||.+.
T Consensus 105 ~~Aa~~AL~~~g~~~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~ 151 (226)
T PF00195_consen 105 EEAARKALAEAGLDPSDITHLVTVSCTGIAAPGLDARLINRLGLRPD 151 (226)
T ss_dssp HHHHHHHHHHHTS-GGGECEEEEEESSSSECS-HHHHHHHHHT--TT
T ss_pred HHHHHHHHHHcCCCCcccceEEEEecCCcCCCchhHHHHhcCCCCCC
Confidence 4788999999999999999999876554 457889999999876
|
3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A .... |
| >PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2 | Back alignment and domain information |
|---|
Probab=92.00 E-value=0.17 Score=40.87 Aligned_cols=73 Identities=18% Similarity=0.152 Sum_probs=43.9
Q ss_pred HHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEE----ecCCCchHHHHHHHHHH--HHHccCCCEE
Q 012506 87 IEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRT----VNRQCSSGLQAVADVAA--AIKAGFYDIG 160 (462)
Q Consensus 87 l~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~----v~~~CsSgl~Ai~~Aa~--~I~sG~~d~v 160 (462)
|+++|++++|||.++.-+.. ....+.++..+|+|......+ -|.+|++-..++..+.. .|+. -|.+
T Consensus 1 L~~~g~~~~did~~i~hq~~------~~~~~~~~~~lgi~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~--Gd~v 72 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQAS------KKILDSIAKRLGIPPERFPDNLAEYGNTGSASIPINLADALEEGRIKP--GDRV 72 (90)
T ss_dssp HHHTT--GGGESEEEE-SSS------HHHHHHHHHHHTS-GGGBE-THHHH-B-GGGHHHHHHHHHHHTTSSCT--TEEE
T ss_pred CccccCCHHHCCEEEeCCCC------HHHHHHHHHHcCCcHHHHHHHHhccCcchhhhHHHHHHHHHHcCCCCC--CCEE
Confidence 68999999999999985432 234456778899975433222 25567777777766555 3333 3688
Q ss_pred EEEeecC
Q 012506 161 IGAGLES 167 (462)
Q Consensus 161 Lv~G~E~ 167 (462)
+++++-.
T Consensus 73 l~~~~G~ 79 (90)
T PF08541_consen 73 LLVGFGA 79 (90)
T ss_dssp EEEEEET
T ss_pred EEEEEEh
Confidence 8877644
|
3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B .... |
| >PLN03169 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=91.76 E-value=0.6 Score=48.59 Aligned_cols=70 Identities=20% Similarity=0.262 Sum_probs=48.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----CHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhc
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA----FASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 413 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda----fa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~ 413 (462)
..|++++|+++|++++|||++-+.-+ ++....+..++||+.+...- .+=+-.||+|...-.....++-+.
T Consensus 111 ~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~l~~~LGl~~~~~~------~~d~~~gC~g~~~aL~~A~~~~~~ 184 (391)
T PLN03169 111 VEASLACIKEWGRPVSDITHLVYVSSSEARLPGGDLYLAKQLGLSPDVQR------VMLYFLGCSGGVAGLRVAKDIAEN 184 (391)
T ss_pred HHHHHHHHHHhCCCHHHCCEEEEECcCCCCCCcHHHHHHHHhCcCCccee------eecccChhHHHHHHHHHHHHHHHh
Confidence 47999999999999999998765443 55667788899999764210 122345777766655555555443
|
|
| >PRK08313 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=91.73 E-value=0.95 Score=47.03 Aligned_cols=96 Identities=19% Similarity=0.199 Sum_probs=58.9
Q ss_pred EEEEEEEEecc---CCCCCCc-cHHHHHHHHHHHcCCCCCCccEEEec---CCCH---HHHHHHHHHcCCCCCCC-CCCC
Q 012506 318 GVFRTFAAVGV---DPAIMGV-GPAVAIPAAVKSAGLQLDDIDLFEIN---EAFA---SQFVYCRNKLGLDPEKI-NVNG 386 (462)
Q Consensus 318 ~~i~g~~~~~~---~p~~~~~-~~~~Ai~~aL~~AGl~~~DID~~eih---dafa---~~~~~~~e~LGl~~~~v-n~~G 386 (462)
+.|+|.+.... .+..... -...|++++|+.|||+++|||.+-+. +.|. .......+.||+.+.+. ++
T Consensus 5 v~IvG~g~t~~~~~~~~~s~~eL~~eAa~~Al~dAgl~~~dID~iv~~~~~~~~~~~~~~~~~va~~LGl~~~~~~~v-- 82 (386)
T PRK08313 5 AAVLGTGQTKYVAKRQDVSMAGLVREAIDRALADAGLTWDDIDAVVVGKAPDFFEGVMMPELFLADALGATGKPLIRV-- 82 (386)
T ss_pred EEEEEeecCCcCccCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccccccccccCchHHHHHhcCCCCCceEEE--
Confidence 35777776543 1111111 12578999999999999999988764 2221 11245668899976442 22
Q ss_pred CccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEE
Q 012506 387 GALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVIS 423 (462)
Q Consensus 387 G~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~ 423 (462)
+..+++|...+.++...++.. .+++.|+.
T Consensus 83 ------~~~casg~~al~~A~~~I~sG--~~~~vLVv 111 (386)
T PRK08313 83 ------HTAGSVGGSTAVVAASLVQSG--VYRRVLAV 111 (386)
T ss_pred ------eccCHHHHHHHHHHHHHHHCC--CCCEEEEE
Confidence 223456777777777777643 34777764
|
|
| >PLN03168 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=91.08 E-value=0.78 Score=47.72 Aligned_cols=68 Identities=21% Similarity=0.223 Sum_probs=48.0
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----CHHHHHHHHHHcCCCCCC--CCCCCCccccCCccchHHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA----FASQFVYCRNKLGLDPEK--INVNGGALAIGHPLGTTGARCVATLLHEMK 411 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda----fa~~~~~~~e~LGl~~~~--vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~ 411 (462)
..|++++|+++|++++|||++.+.-+ ++.......++||+.+.. +.. .-.||+|..........+-
T Consensus 106 ~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d--------~~~gC~g~~~aL~~A~~~i 177 (389)
T PLN03168 106 AEAAQKAIKEWGGRKSDITHIVFATTSGVNMPGADHALAKLLGLKPTVKRVMM--------YQTGCFGGASVLRVAKDLA 177 (389)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCccHHHHHHHHhCcCCcceeeee--------eCCccHHHHHHHHHHHHHH
Confidence 47899999999999999999976533 556678889999997642 222 2246776666555555555
Q ss_pred hc
Q 012506 412 RR 413 (462)
Q Consensus 412 ~~ 413 (462)
+.
T Consensus 178 ~~ 179 (389)
T PLN03168 178 EN 179 (389)
T ss_pred Hh
Confidence 43
|
|
| >PRK07855 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=91.00 E-value=1.6 Score=45.33 Aligned_cols=95 Identities=17% Similarity=0.129 Sum_probs=60.2
Q ss_pred EEEEEEEEeccCCCCCCcc----HHHHHHHHHHHcCCCCCCccEEEecCCCHHHHHHHHHHcCCCC-CCC-CCCCCcccc
Q 012506 318 GVFRTFAAVGVDPAIMGVG----PAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDP-EKI-NVNGGALAI 391 (462)
Q Consensus 318 ~~i~g~~~~~~~p~~~~~~----~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~~~e~LGl~~-~~v-n~~GG~~a~ 391 (462)
+.|+|.+....... .+.. ...|++++|+.|||+++|||.+-++.........+.+.||+.+ +++ ++
T Consensus 6 v~IvG~g~t~~~r~-~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~~~~~~~l~~~lGl~~~~~~~~v------- 77 (386)
T PRK07855 6 AAIVGIGATEFSKN-SGRSELRLACEAVLAALDDAGLAPSDVDGLVTFTMDTNPEIAVARALGIGELKFFSRI------- 77 (386)
T ss_pred EEEEEeeecccccC-CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCccccHHHHHHHCCCCCCcceeee-------
Confidence 35777776543221 1112 2578999999999999999977653211111244678899976 332 32
Q ss_pred CCccchHHHHHHHHHHHHHHhcCCCCcEEEEE
Q 012506 392 GHPLGTTGARCVATLLHEMKRRGRDCRFGVIS 423 (462)
Q Consensus 392 Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~ 423 (462)
+..|+||...+.++...++.. .++..|+.
T Consensus 78 -~~gg~sg~~~~~~A~~~I~sG--~~d~vLv~ 106 (386)
T PRK07855 78 -HYGGGAACATVQQAAMAVATG--VADVVVCY 106 (386)
T ss_pred -cCCcHHHHHHHHHHHHHHHCC--CCCEEEEE
Confidence 345678877788888777764 34777764
|
|
| >PLN03173 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=90.90 E-value=0.92 Score=47.23 Aligned_cols=70 Identities=16% Similarity=0.099 Sum_probs=47.8
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec----CCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhc
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEIN----EAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 413 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eih----dafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~ 413 (462)
..|++++|+++|++++|||++... ..++.......++||+.+.-... +-+-.||+|...-.....++-+.
T Consensus 107 ~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~P~~a~~l~~~LGl~~~~~~~------~~~~~gC~g~~~aL~~A~~~~~~ 180 (391)
T PLN03173 107 KEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRF------MMYQQGCFAGGTVLRLAKDLAEN 180 (391)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEccCCCcccHHHHHHHHHhCCCccceee------ehhcCccHHHHHHHHHHHHHHHh
Confidence 478999999999999999987553 23567788889999997642111 11233677666655555555543
|
|
| >PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=90.51 E-value=2.4 Score=40.54 Aligned_cols=92 Identities=12% Similarity=0.027 Sum_probs=69.2
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCc-----------c------------ccHHHHHHHHcCCCCCcc
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQ-----------R------------ASECRMAAFYAGFPETVP 130 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~-----------~------------~~~a~~~a~~~Glp~~~p 130 (462)
....|+.+++.+++++. .++|.+|+++..++... . ...+.+++...+. +.+
T Consensus 33 ~~~rla~~~a~~~~~~~----~~~d~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~aG~~sI~~~~--~~~ 106 (218)
T PF13723_consen 33 RLSRLALEAALECLAED----EQPDAIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAAGYWSIATKN--TGP 106 (218)
T ss_pred HHHHHHHHHHHHHHhcc----CCCCcEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHHHHHHHHhCC--CCc
Confidence 35667777777777442 57789999987766420 0 0134566666777 679
Q ss_pred eEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCC
Q 012506 131 VRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNP 172 (462)
Q Consensus 131 ~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~ 172 (462)
..++..+-.|...|+..|+..++.| .+-||++.+|.....+
T Consensus 107 ~tal~a~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~p~~ 147 (218)
T PF13723_consen 107 NTALAAGEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPLPEP 147 (218)
T ss_pred eEEEecCcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCCChh
Confidence 9999999999999999999999999 8999999999876543
|
|
| >PLN03170 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=90.50 E-value=0.82 Score=47.78 Aligned_cols=71 Identities=15% Similarity=0.132 Sum_probs=49.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC----CCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhc
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINE----AFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 413 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihd----afa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~ 413 (462)
..|++++|+++|++++|||++-+-- .+.....+..++||+.+...- .+-+-.||+|...-.....++-+.
T Consensus 111 ~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r------~~d~~~gC~G~~~aL~~A~~l~~~ 184 (401)
T PLN03170 111 KAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNR------LMMYQQGCFAGGTVLRVAKDLAEN 184 (401)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEccCCCCCChHHHHHHHHhCcCcccHH------HHhhcChhHHHHHHHHHHHHHHHc
Confidence 4789999999999999999865422 366778889999999764210 122345777777766666666554
Q ss_pred C
Q 012506 414 G 414 (462)
Q Consensus 414 ~ 414 (462)
+
T Consensus 185 ~ 185 (401)
T PLN03170 185 N 185 (401)
T ss_pred C
Confidence 3
|
|
| >COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=90.38 E-value=0.94 Score=45.02 Aligned_cols=68 Identities=24% Similarity=0.316 Sum_probs=54.3
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCCH----HHHHHHHHHcCCCCC--CCCCCCCccccCCccchHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAFA----SQFVYCRNKLGLDPE--KINVNGGALAIGHPLGTTGARCVATLLHE 409 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdafa----~~~~~~~e~LGl~~~--~vn~~GG~~a~Ghp~gatG~~~~~~~~~q 409 (462)
..+.+++|+.+++.++|||.+..-.+.. +.....+.+|||.|. ++.++| +|=..|++|++...+-++.
T Consensus 81 v~a~r~aL~~~~l~pedId~vv~vtsTG~~~Ps~dari~~~Lgl~p~~~Rvpv~g----lGCaaga~glara~~y~ra 154 (356)
T COG3424 81 VDALRRALDGSPLRPEDIDAVVTVTSTGLATPSLDARIVGELGLSPDTRRVPVWG----LGCAAGAAGLARARDYCRA 154 (356)
T ss_pred HHHHHHHhccCCCCHHHCcEEEEEeeccccCCChhHHHHhhcCCCCccceeeeec----chhhhhhhHHHHHHHHHhh
Confidence 4788999999999999999998765433 456788899999875 677776 7777888888877777654
|
|
| >PRK06065 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=90.36 E-value=1.3 Score=46.04 Aligned_cols=96 Identities=19% Similarity=0.046 Sum_probs=60.7
Q ss_pred EEEEEEEEeccCCC--CCCcc-HHHHHHHHHHHcCCCCCCccEEEec---CCC---HHHHHHHHHHcCCCCCCC-CCCCC
Q 012506 318 GVFRTFAAVGVDPA--IMGVG-PAVAIPAAVKSAGLQLDDIDLFEIN---EAF---ASQFVYCRNKLGLDPEKI-NVNGG 387 (462)
Q Consensus 318 ~~i~g~~~~~~~p~--~~~~~-~~~Ai~~aL~~AGl~~~DID~~eih---daf---a~~~~~~~e~LGl~~~~v-n~~GG 387 (462)
+.|+|.+....... ..... ...|++++|+.+||+++|||.+-+. +.+ .....+..+.||+.+.+. ++
T Consensus 11 vaIvG~g~t~~~~~~~~~~~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~~~~~~~V--- 87 (392)
T PRK06065 11 VAVIGAGLTLFRRRLLETPQELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGIRKPVSRV--- 87 (392)
T ss_pred eEEEEecccCCcCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCCCCCeEEE---
Confidence 35777776543221 11111 2579999999999999999988664 222 113345667888865443 22
Q ss_pred ccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEE
Q 012506 388 ALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVIS 423 (462)
Q Consensus 388 ~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~ 423 (462)
+..++||...+..+...++...- +..|+.
T Consensus 88 -----~~~gasG~~al~~A~~~I~sG~a--d~vLVv 116 (392)
T PRK06065 88 -----YVGGATGVMTAIAGWYHVASGLC--QKVLAV 116 (392)
T ss_pred -----ecCchhHHHHHHHHHHHHhCCCC--CEEEEE
Confidence 23478888888888887776433 677763
|
|
| >PLN03171 chalcone synthase-like protein; Provisional | Back alignment and domain information |
|---|
Probab=90.23 E-value=1.2 Score=46.40 Aligned_cols=70 Identities=19% Similarity=0.175 Sum_probs=50.0
Q ss_pred HHHHHHHHHHcCCCCCCccEEEe----cCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhc
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEI----NEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 413 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~ei----hdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~ 413 (462)
..|++++|+++|++++|||++-. .+.++....+..++||+.+..--. .+ .-.||+|...-......+-..
T Consensus 113 ~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~~-----~~-~~~gC~g~~~aL~~A~~li~~ 186 (399)
T PLN03171 113 AEAAKKAIAEWGRPAADITHLVVTTNSGAHIPGVDFRLVPLLGLRPSVRRT-----ML-HLNGCFAGAAALRLAKDLAEN 186 (399)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHhCCCccccee-----ec-cCCccHHHHHHHHHHHHHHHh
Confidence 47899999999999999999976 244677788889999997542101 01 122788877777766666554
|
|
| >PLN00415 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=90.16 E-value=0.85 Score=48.31 Aligned_cols=68 Identities=18% Similarity=0.311 Sum_probs=46.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec----CCCHHHHHHHHHHcCCCCC--CCCCCCCccccCCccchHHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEIN----EAFASQFVYCRNKLGLDPE--KINVNGGALAIGHPLGTTGARCVATLLHEMK 411 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eih----dafa~~~~~~~e~LGl~~~--~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~ 411 (462)
..|++++|+++|++++|||++-++ ..+++...+..++||+.+. .++.+| +||+|...-+....++-
T Consensus 139 ~~A~~~aL~~aGi~p~dID~LIvs~T~~~~~Pslaa~l~~~LGLr~~v~~~dL~g--------mGCsggv~aL~lA~~ll 210 (466)
T PLN00415 139 FGALNSLFKKTGIEPREVGIFIVNCSLFNPNPSLSSMIVNRYKLKTDVKTYNLSG--------MGCSAGAISVDLATNLL 210 (466)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECcCCCCCchHHHHHHHHhCCCCCceEEEecc--------ccchHHHHHHHHHHHHH
Confidence 458899999999999999987654 2345667788899999743 345533 35665555555555555
Q ss_pred hc
Q 012506 412 RR 413 (462)
Q Consensus 412 ~~ 413 (462)
+.
T Consensus 211 ~a 212 (466)
T PLN00415 211 KA 212 (466)
T ss_pred Hh
Confidence 43
|
|
| >PRK06365 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=89.83 E-value=2.3 Score=44.84 Aligned_cols=77 Identities=23% Similarity=0.192 Sum_probs=52.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC---CCH---HHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINE---AFA---SQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMK 411 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihd---afa---~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~ 411 (462)
..|+..+|+++||+++|||.+-... .+. ....+..+.||+.+.+.... +-.++||+..+..+...++
T Consensus 42 ~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~~~~~~~~lGl~~~~~~~v-------~~~~aSg~~ai~~A~~~I~ 114 (430)
T PRK06365 42 KKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLAGIMVQDYLGLVPKPSKRI-------EGGGATGGLAFQAGYEEIA 114 (430)
T ss_pred HHHHHHHHHHcCCCHHHcCEEEEecccccccccchhhHHHHHhcCCCCCceEEE-------eCCcHHHHHHHHHHHHHHH
Confidence 4688999999999999999875532 221 12234568899976543221 2357888888888888887
Q ss_pred hcCCCCcEEEEE
Q 012506 412 RRGRDCRFGVIS 423 (462)
Q Consensus 412 ~~~~~~~~gl~~ 423 (462)
.... +..|+.
T Consensus 115 sG~~--~~vLv~ 124 (430)
T PRK06365 115 SGRM--DCVAVY 124 (430)
T ss_pred cCCC--CEEEEE
Confidence 6433 666653
|
|
| >PRK12404 stage V sporulation protein AD; Provisional | Back alignment and domain information |
|---|
Probab=89.16 E-value=1.5 Score=44.24 Aligned_cols=40 Identities=23% Similarity=0.380 Sum_probs=32.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC----CCHHHHHHHHHHcCCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINE----AFASQFVYCRNKLGLDP 379 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihd----afa~~~~~~~e~LGl~~ 379 (462)
..|+++||+++||+++|||++-..+ .++.. +..+.||++.
T Consensus 59 ~EA~~~AL~kAGI~~~DID~i~vGdL~nQ~ipss--fvar~LGIP~ 102 (334)
T PRK12404 59 EEACSRAIEKAKLRKEDIQFFLAGDLMNQITPTS--FAARTLGIPY 102 (334)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCcCcHH--HHHHHhCCCc
Confidence 5799999999999999999999854 44443 7778999654
|
|
| >PLN03172 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=89.16 E-value=1.6 Score=45.59 Aligned_cols=67 Identities=18% Similarity=0.157 Sum_probs=46.2
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec----CCCHHHHHHHHHHcCCCCCC--CCCCCCccccCCccchHHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEIN----EAFASQFVYCRNKLGLDPEK--INVNGGALAIGHPLGTTGARCVATLLHEMK 411 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eih----dafa~~~~~~~e~LGl~~~~--vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~ 411 (462)
..|++++|+++|++++|||++.+. ..++....+..++||+.+.- +.. +-.||+|...-.....++-
T Consensus 107 ~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~--------~~~gC~g~~~aL~~A~~~~ 178 (393)
T PLN03172 107 KEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRFMM--------YQQGCFAGGTVLRLAKDLA 178 (393)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEccCCCcCchHHHHHHHHhCCCCCceEEee--------eCCchHHHHHHHHHHHHHH
Confidence 478999999999999999987543 34667788899999997642 222 2235666555444444444
Q ss_pred h
Q 012506 412 R 412 (462)
Q Consensus 412 ~ 412 (462)
+
T Consensus 179 ~ 179 (393)
T PLN03172 179 E 179 (393)
T ss_pred H
Confidence 3
|
|
| >PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=88.76 E-value=1.5 Score=45.44 Aligned_cols=82 Identities=16% Similarity=0.078 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHc-----CCCCCcceEEe----cCCCchHHHHHHHHH
Q 012506 79 LAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYA-----GFPETVPVRTV----NRQCSSGLQAVADVA 149 (462)
Q Consensus 79 ~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~-----Glp~~~p~~~v----~~~CsSgl~Ai~~Aa 149 (462)
...+++++|+++|+.++|||.++.=+.. ...-..++..+ |+|...-..++ |++|+|-..++..+.
T Consensus 274 ~~~~i~~~L~~~gl~~~DId~~v~Hq~n------~~~~~~v~~~l~~~~~gl~~~k~~~~~~~~GNt~sAsipi~L~~a~ 347 (378)
T PRK06816 274 TIKPLLELVDKRNLDPDDIDYFLPHYSS------EYFREKIVELLAKAGFMIPEEKWFTNLATVGNTGSASIYIMLDELL 347 (378)
T ss_pred HHHHHHHHHHHcCCChhhCCEEeeCccc------HHHHHHHHHHHHhccCCCChhheEEeccccccccchHHHHHHHHHH
Confidence 3677888999999999999988863332 22334555554 88754333333 556666666776553
Q ss_pred H--HHHccCCCEEEEEeecCC
Q 012506 150 A--AIKAGFYDIGIGAGLESM 168 (462)
Q Consensus 150 ~--~I~sG~~d~vLv~G~E~m 168 (462)
. .|+.| |.+++.+.|+-
T Consensus 348 ~~g~~~~G--d~vl~~~~~s~ 366 (378)
T PRK06816 348 NSGRLKPG--QKILCFVPESG 366 (378)
T ss_pred HcCCCCCC--CEEEEEEeccc
Confidence 3 23333 77888887773
|
|
| >PRK08142 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=88.41 E-value=3 Score=43.41 Aligned_cols=97 Identities=16% Similarity=0.142 Sum_probs=60.6
Q ss_pred EEEEEEEEeccC--CCCCCcc-HHHHHHHHHHHcCCCCCCccEEEecCCCHH-HHHHHHHHcCCCCCCCCCCCCccccCC
Q 012506 318 GVFRTFAAVGVD--PAIMGVG-PAVAIPAAVKSAGLQLDDIDLFEINEAFAS-QFVYCRNKLGLDPEKINVNGGALAIGH 393 (462)
Q Consensus 318 ~~i~g~~~~~~~--p~~~~~~-~~~Ai~~aL~~AGl~~~DID~~eihdafa~-~~~~~~e~LGl~~~~vn~~GG~~a~Gh 393 (462)
+.|+|.+.+... ++..... ...|+.++|+.|||+++|||.+-.+..... ......+.||+.+.++.. .+
T Consensus 7 vaIvG~g~t~~~~~~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~~~~~~~~~~~~lGl~~~~~~~-------v~ 79 (388)
T PRK08142 7 AYIVGAYEHPTRKAPDKSVAQLHAEVAKGALADAGLSLADVDGYFCAGDAPGLGPASMVDYLGLKLRHVDS-------TE 79 (388)
T ss_pred EEEEEEeeccceeCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCCCccHHHHHHhCCCCCeeecc-------cc
Confidence 467777765422 2211111 257899999999999999998754211111 113467899997644322 24
Q ss_pred ccchHHHHHHHHHHHHHHhcCCCCcEEEEE
Q 012506 394 PLGTTGARCVATLLHEMKRRGRDCRFGVIS 423 (462)
Q Consensus 394 p~gatG~~~~~~~~~qL~~~~~~~~~gl~~ 423 (462)
..|++|...+.++...++... ++..|+.
T Consensus 80 ~gg~s~~~a~~~A~~~I~sG~--~d~vLvv 107 (388)
T PRK08142 80 TGGSSYLAHVGHAAQAIAAGK--CSVALIT 107 (388)
T ss_pred CCcHHHHHHHHHHHHHHHcCC--CCEEEEE
Confidence 457888777888888887643 3677763
|
|
| >PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=88.25 E-value=2 Score=43.19 Aligned_cols=70 Identities=21% Similarity=0.151 Sum_probs=43.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----CHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHh
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 412 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda-----fa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~ 412 (462)
..|++++|+++|++++|||++-.... .+....+..+.||+.+.... ++..-.+|+|.........++-.
T Consensus 57 ~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~p~~a~~v~~~lgl~~~~~~------~~~v~~~C~~~~~al~~a~~~l~ 130 (329)
T PRK07204 57 AEAAKKAVEDAKLTLDDIDCIICASGTIQQAIPCTASLIQEQLGLQHSGIP------CFDINSTCLSFITALDTISYAIE 130 (329)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCccHHHHHHHHhCCCCCCce------EEEccchhHHHHHHHHHHHHHHH
Confidence 46899999999999999998865421 24445667788999753111 12222356655554444444443
Q ss_pred c
Q 012506 413 R 413 (462)
Q Consensus 413 ~ 413 (462)
.
T Consensus 131 ~ 131 (329)
T PRK07204 131 C 131 (329)
T ss_pred C
Confidence 3
|
|
| >PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=88.02 E-value=1.7 Score=44.50 Aligned_cols=68 Identities=13% Similarity=0.214 Sum_probs=47.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----CHHHHHHHHHHcCCCCC--CCCCCCCccccCCccchHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGLDPE--KINVNGGALAIGHPLGTTGARCVATLLHEM 410 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda-----fa~~~~~~~e~LGl~~~--~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL 410 (462)
..|++++|+++|++++|||++...-+ .+....+..++||+.+. .+.++ .||+|...-.....++
T Consensus 65 ~~Aa~~aL~~a~~~~~dId~lI~~t~t~d~~~P~~a~~v~~~Lg~~~~~~~~di~---------~~C~g~~~aL~~A~~~ 135 (353)
T PRK12880 65 KHAANTLLQGLNIDKNSLDALIVVTQSPDFFMPSTACYLHQLLNLSSKTIAFDLG---------QACAGYLYGLFVAHSL 135 (353)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCceEEehh---------hhhHHHHHHHHHHHHH
Confidence 57999999999999999999987543 44667888899999643 22332 2566666655555555
Q ss_pred HhcC
Q 012506 411 KRRG 414 (462)
Q Consensus 411 ~~~~ 414 (462)
-+.+
T Consensus 136 i~~~ 139 (353)
T PRK12880 136 IQSG 139 (353)
T ss_pred HHcC
Confidence 5543
|
|
| >PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=87.74 E-value=2.4 Score=42.67 Aligned_cols=66 Identities=23% Similarity=0.222 Sum_probs=43.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----CHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMK 411 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda-----fa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~ 411 (462)
..|++++|+++|++++|||++-...+ ......+..++||+.+.. ++.-..+|+|...-......+-
T Consensus 57 ~~Aa~~aL~~ag~~~~~Id~li~~t~~~d~~~p~~a~~v~~~Lg~~~~~--------~~di~~~C~g~~~aL~~A~~~l 127 (326)
T PRK05963 57 ASAGDMALSDAGIERSDIALTLLATSTPDHLLPPSAPLLAHRLGLQNSG--------AIDLAGACAGFLYALVLADGFV 127 (326)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCcHHHHHHHHhCCCCCc--------eeeccchhhHHHHHHHHHHHHH
Confidence 57999999999999999999976322 234556788999996432 1122235666655444444443
|
|
| >PRK12578 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=87.47 E-value=2.7 Score=43.56 Aligned_cols=76 Identities=17% Similarity=0.173 Sum_probs=51.8
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCCH-----HHHHHHHHHcCCCCCC-CCCCCCccccCCccchHHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAFA-----SQFVYCRNKLGLDPEK-INVNGGALAIGHPLGTTGARCVATLLHEMK 411 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdafa-----~~~~~~~e~LGl~~~~-vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~ 411 (462)
..|++++|+++||+++|||.+-+-.... .......+.||+...+ +.+ +...++|+..+..+...++
T Consensus 26 ~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~~~~v--------~~~casg~~al~~A~~~I~ 97 (385)
T PRK12578 26 WESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGLTGKVPLRV--------EAMCATGLAASLTAYTAVA 97 (385)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecccccccCChHHHHHHHhCCCCCCeeEE--------eccCHHHHHHHHHHHHHHH
Confidence 5799999999999999999887543221 1134566889997543 233 2345777777888888877
Q ss_pred hcCCCCcEEEEE
Q 012506 412 RRGRDCRFGVIS 423 (462)
Q Consensus 412 ~~~~~~~~gl~~ 423 (462)
... +++.|+.
T Consensus 98 sG~--~~~vLvv 107 (385)
T PRK12578 98 SGL--VDMAIAV 107 (385)
T ss_pred CCC--CCEEEEE
Confidence 543 3777764
|
|
| >PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=87.43 E-value=1.6 Score=37.22 Aligned_cols=101 Identities=20% Similarity=0.237 Sum_probs=56.2
Q ss_pred EEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCC---Cc
Q 012506 53 VIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE---TV 129 (462)
Q Consensus 53 ~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~---~~ 129 (462)
+|.|.+-+--+. ........+...+ .++++++|+++++++++||.|..--. +...........+...++-.. .+
T Consensus 3 ~i~g~~~~~dg~-~~~~~~~p~~~~~-~~~i~~al~~agi~~~~I~~i~~hg~-Gt~~~D~~E~~ai~~~~~~~~~~~~~ 79 (119)
T PF02801_consen 3 VIRGYGVNSDGA-RSSSLTAPNGAAL-ARAIRRALADAGISPEDIDYIEAHGT-GTPLGDAAEAEAIARVFGDSARQQPV 79 (119)
T ss_dssp EEEEEEEEE-SS-STSSSSSTTHHHH-HHHHHHHHHHHTS-GGGEEEEE-----SSHHHHHHHHHHHHHHHGGGGGTSTS
T ss_pred EEEEEEEECCCC-CCCCCcCcCHHHH-HHHHHHHHhhhccccccceeeeeecc-ccccchhhhhhhhhhhhccccccccc
Confidence 566666554331 1122233344444 78899999999999999998875221 111102334444555444311 13
Q ss_pred ceEEe-----cCCCchHHHHHHHHHHHHHccC
Q 012506 130 PVRTV-----NRQCSSGLQAVADVAAAIKAGF 156 (462)
Q Consensus 130 p~~~v-----~~~CsSgl~Ai~~Aa~~I~sG~ 156 (462)
|+..+ ...++||+..+..+...++.|.
T Consensus 80 ~v~s~K~~~Gh~~~asG~~~l~~~~l~l~~~~ 111 (119)
T PF02801_consen 80 PVGSVKSNIGHTEAASGLLSLAKALLALEHGT 111 (119)
T ss_dssp EEE-THHHH-B-GGGHHHHHHHHHHHHHHHTE
T ss_pred ceeccccccccccccchHHHHHHHHHHHhcCC
Confidence 43332 3467899999999999988874
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A .... |
| >PRK06840 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=87.34 E-value=2.5 Score=42.80 Aligned_cols=42 Identities=21% Similarity=0.225 Sum_probs=31.2
Q ss_pred HHHHHHHHHHcCCCCCCccEEEe-cCC-----CHHHHHHHHHHcCCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEI-NEA-----FASQFVYCRNKLGLDP 379 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~ei-hda-----fa~~~~~~~e~LGl~~ 379 (462)
..|++++|+++|++++|||++-. +.. +.....++.+.||+..
T Consensus 58 ~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~~p~~a~~l~~~lGl~~ 105 (339)
T PRK06840 58 IAAAKPALKQAGVDPAAIDVVIYIGSEHKDYPVWSSAPKIQHEIGAKN 105 (339)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEeccCCCCCCCCchHHHHHHHhCCCC
Confidence 57999999999999999998753 221 2233456778899964
|
|
| >COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=87.04 E-value=2.3 Score=43.03 Aligned_cols=70 Identities=26% Similarity=0.358 Sum_probs=54.0
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec-----CCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHh
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEIN-----EAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 412 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eih-----dafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~ 412 (462)
..|+++||+.||++++|||++-+- ..|+++.-...+.||+..-+ +|==...|+|...-.....++-+
T Consensus 57 ~~Aa~~AL~~Agi~~~dIDlII~aT~tpd~~~Ps~A~~vq~~LG~~~~~--------afDl~aaCsgf~yaL~~A~~~i~ 128 (323)
T COG0332 57 VEAARKALEDAGISPDDIDLIIVATSTPDHLFPSTACLVQARLGLGGAP--------AFDLQAACSGFLYALSVADGLIR 128 (323)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCcccCCChHHHHHHHHhCCCCcc--------eeechhhhHHHHHHHHHHHHHHH
Confidence 479999999999999999999863 45788888888999996521 12223468888888888888777
Q ss_pred cCC
Q 012506 413 RGR 415 (462)
Q Consensus 413 ~~~ 415 (462)
.+.
T Consensus 129 sG~ 131 (323)
T COG0332 129 SGG 131 (323)
T ss_pred cCC
Confidence 653
|
|
| >PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 | Back alignment and domain information |
|---|
Probab=86.51 E-value=3.3 Score=37.21 Aligned_cols=101 Identities=16% Similarity=0.225 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCc-cccCCccchHHHHHHHHHHHHHHhcCC
Q 012506 337 PAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGA-LAIGHPLGTTGARCVATLLHEMKRRGR 415 (462)
Q Consensus 337 ~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~-~a~Ghp~gatG~~~~~~~~~qL~~~~~ 415 (462)
....+..+|++.|++..|+++|-+|=.-........+.|||+++++-.+=-. -.+||...+|=..-+-++..+-..++.
T Consensus 42 i~~~~~~~L~~~g~~~~~~~~wavHPGG~~ILd~v~~~L~L~~~~l~~Sr~vLr~yGNmSSaTVlfVL~~~~~~~~~~g~ 121 (151)
T PF02797_consen 42 IPPFVEDLLARHGLSDWDILFWAVHPGGRKILDAVEEALGLSPEQLRASREVLREYGNMSSATVLFVLERMRRKSAEEGA 121 (151)
T ss_dssp HHHHHHHHHHGGTCCSGGGSEEEEE-SSHHHHHHHHHHHTS-GGGGHHHHHHHHHH-B-GGGHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhhhcccccccceeeecCChHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCcchHHHHHHHHhhhhhhcc
Confidence 3467788999999998788899999999988888889999998865443222 238898888855544444432221221
Q ss_pred -----CCcEEEEEeecccceeE-EEEEEe
Q 012506 416 -----DCRFGVISMCIGTGMGA-AAVFER 438 (462)
Q Consensus 416 -----~~~~gl~~~~~G~G~g~-A~v~~~ 438 (462)
+.++++... .|-|+.+ .++|.+
T Consensus 122 ~~~~~g~~~gv~~a-fGPG~t~E~~lLr~ 149 (151)
T PF02797_consen 122 PPPGEGGEWGVMLA-FGPGLTIEGMLLRS 149 (151)
T ss_dssp SBTTTTBSEEEEEE-EETTTEEEEEEEEE
T ss_pred cCCCCCCCeEEEEE-ECCcceEeeEEEee
Confidence 236888765 6777776 445543
|
3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyze the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group []. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 3OV2_A 3OV3_B 1Z1F_A 1Z1E_A 3ALE_C 3OIT_A 2H84_A 1TEE_D 1TED_A 2P0U_A .... |
| >TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative | Back alignment and domain information |
|---|
Probab=86.36 E-value=1.7 Score=44.40 Aligned_cols=85 Identities=18% Similarity=0.133 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceE------EecCCCchHHHHHHHH
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVR------TVNRQCSSGLQAVADV 148 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~------~v~~~CsSgl~Ai~~A 148 (462)
....+..+++++|+++|++++|||.+++=+.. ...-..+...+|+|...-.. .-|.+++|-..++..+
T Consensus 206 ~~~~~~~~~~~~L~~~gl~~~did~~i~Hq~~------~~~~~~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~ 279 (345)
T TIGR00748 206 YFHHVVTAAKGLMEKLGLTPEDFDYAVFHQPN------GKFYLVAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAV 279 (345)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEeCCCC------hHHHHHHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHH
Confidence 44555688899999999999999988873221 22344578889997432221 2366677877888877
Q ss_pred HHHHHccCCCEEEEEeecC
Q 012506 149 AAAIKAGFYDIGIGAGLES 167 (462)
Q Consensus 149 a~~I~sG~~d~vLv~G~E~ 167 (462)
...++.| |.++.+|+=.
T Consensus 280 ~~~~~~G--d~vll~~~G~ 296 (345)
T TIGR00748 280 LDIAEPG--DRILAVSYGS 296 (345)
T ss_pred HHhcCCC--CEEEEEEecC
Confidence 7777777 5777777644
|
Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound. |
| >cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=85.77 E-value=2.7 Score=43.60 Aligned_cols=75 Identities=20% Similarity=0.221 Sum_probs=47.6
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC-----HHHHHHHHHHcCCCC-C-CCCCCCCccccCCccchHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAF-----ASQFVYCRNKLGLDP-E-KINVNGGALAIGHPLGTTGARCVATLLHEM 410 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdaf-----a~~~~~~~e~LGl~~-~-~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL 410 (462)
..|++++|+++||+++|||.+-+...+ ........+.||+.+ . ..+++ ..+++|+..+..+...+
T Consensus 27 ~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl~~~~~~~~v~--------~~c~s~~~al~~A~~~I 98 (386)
T cd00751 27 AAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVPATTVN--------RVCGSGLQAVALAAQSI 98 (386)
T ss_pred HHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCchhhhc--------cccHHHHHHHHHHHHHH
Confidence 479999999999999999988653221 222334667899975 2 23332 23455666666666666
Q ss_pred HhcCCCCcEEEE
Q 012506 411 KRRGRDCRFGVI 422 (462)
Q Consensus 411 ~~~~~~~~~gl~ 422 (462)
+.. .++..|+
T Consensus 99 ~sG--~~~~vLv 108 (386)
T cd00751 99 AAG--EADVVVA 108 (386)
T ss_pred HCC--CCCeEEE
Confidence 543 3367775
|
They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >PRK08304 stage V sporulation protein AD; Validated | Back alignment and domain information |
|---|
Probab=85.75 E-value=2.5 Score=42.80 Aligned_cols=40 Identities=25% Similarity=0.370 Sum_probs=30.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC--HHHHHHHHHHcCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAF--ASQFVYCRNKLGL 377 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdaf--a~~~~~~~e~LGl 377 (462)
..|+++||+++||+++|||++-.-+.. .+...+..+.||+
T Consensus 61 ~eAa~~ALekAGI~~~DID~lI~Gdll~Q~~sAs~vA~~LGI 102 (337)
T PRK08304 61 EDAIQQALQKANLKKSDIDYLLAGDLLNQIISANFAARELGI 102 (337)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCcchHHHHHHHhCC
Confidence 579999999999999999999775432 2234456688887
|
|
| >PRK04262 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=85.63 E-value=2.3 Score=43.36 Aligned_cols=42 Identities=21% Similarity=0.275 Sum_probs=31.3
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC-----HHHHHHHHHHcCCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAF-----ASQFVYCRNKLGLDP 379 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdaf-----a~~~~~~~e~LGl~~ 379 (462)
..|++++|+++|++++|||++-...+. .....++.+.||+.+
T Consensus 56 ~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~ 102 (347)
T PRK04262 56 VEAARNALKRAGIDPKEIGAVYVGSESHPYAVKPTATIVAEALGATP 102 (347)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCcccccHHHHHHHHcCCCC
Confidence 479999999999999999998653221 123445668899965
|
|
| >PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=85.35 E-value=3.8 Score=41.33 Aligned_cols=42 Identities=24% Similarity=0.241 Sum_probs=33.0
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----CHHHHHHHHHHcCCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGLDP 379 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda-----fa~~~~~~~e~LGl~~ 379 (462)
..|++++|+++|++++|||++-.... ......++.+.||+++
T Consensus 66 ~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~~p~~a~~v~~~lgl~~ 112 (338)
T PRK09258 66 IAAGRKALAEAGIDPSDIGLLINTSVCRDYLEPATACRVHHNLGLPK 112 (338)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHcCCCC
Confidence 57999999999999999999876432 2344566778999975
|
|
| >PRK06059 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=85.06 E-value=3.6 Score=42.89 Aligned_cols=77 Identities=17% Similarity=0.240 Sum_probs=50.3
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC----CC--HHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINE----AF--ASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMK 411 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihd----af--a~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~ 411 (462)
..|++++|+++||+++|||.+-... .+ ........+.||+.+.+... + +...+||...+..+...++
T Consensus 28 ~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~~~~~~~------v-~~~Casg~~al~~A~~~I~ 100 (399)
T PRK06059 28 VVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWNGAPVSS------S-YAACASGSQALQSARAQIL 100 (399)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCCCCceec------c-cchhHHHHHHHHHHHHHHH
Confidence 5789999999999999999886421 11 12234566889996543321 1 3345666777777777777
Q ss_pred hcCCCCcEEEEE
Q 012506 412 RRGRDCRFGVIS 423 (462)
Q Consensus 412 ~~~~~~~~gl~~ 423 (462)
... +++.|+.
T Consensus 101 sG~--~~~vLvv 110 (399)
T PRK06059 101 AGL--CDVALVV 110 (399)
T ss_pred CCC--CCEEEEE
Confidence 543 3677764
|
|
| >TIGR02845 spore_V_AD stage V sporulation protein AD | Back alignment and domain information |
|---|
Probab=85.04 E-value=2.9 Score=42.21 Aligned_cols=41 Identities=27% Similarity=0.421 Sum_probs=31.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC--HHHHHHHHHHcCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAF--ASQFVYCRNKLGLD 378 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdaf--a~~~~~~~e~LGl~ 378 (462)
..|+++||+++||+++|||++-.-+.. .....+..+.||++
T Consensus 55 ~eAa~~ALekAGL~~~DID~IIvGdl~~Q~~~As~vA~~LGIP 97 (327)
T TIGR02845 55 EDAVNLALKKANLKKDDVDFFLAGDLLNQIITANFVARDLGIP 97 (327)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEeCCCCcccHHHHHHHHhCCC
Confidence 579999999999999999999775532 12344667889973
|
Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation. |
| >PRK08257 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=85.03 E-value=7.2 Score=42.01 Aligned_cols=95 Identities=22% Similarity=0.264 Sum_probs=61.1
Q ss_pred EEEEEEEeccCCCCCC--ccH----HHHHHHHHHHcCCC--CCCccEEEecCCCH----HHHHHHHHHcCCCCCCCCCCC
Q 012506 319 VFRTFAAVGVDPAIMG--VGP----AVAIPAAVKSAGLQ--LDDIDLFEINEAFA----SQFVYCRNKLGLDPEKINVNG 386 (462)
Q Consensus 319 ~i~g~~~~~~~p~~~~--~~~----~~Ai~~aL~~AGl~--~~DID~~eihdafa----~~~~~~~e~LGl~~~~vn~~G 386 (462)
.|+|.+.....+.... ..+ ..|++++|+.+|++ ++|||-+-+-..+. .....+.+.||+.+.+. ..
T Consensus 7 ~IVGvG~t~~~~~~~~~~~s~~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~~~~~~~~~la~~lGl~p~~~-~~- 84 (498)
T PRK08257 7 VIVGVGQVTERPDDPAYGLEPVDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSWRYRDPPGLLAERLGADPART-VY- 84 (498)
T ss_pred EEEEeeecccccCCcccCCCHHHHHHHHHHHHHHhcCCCcCHHHCCEEEEeccccccccCHHHHHHHHcCCCCcce-eE-
Confidence 5778877543221111 122 57899999999999 99999776532221 12355778999965432 21
Q ss_pred CccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEE
Q 012506 387 GALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVI 422 (462)
Q Consensus 387 G~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~ 422 (462)
.+..|+++...+.++...+.... ++..|+
T Consensus 85 -----~~~GG~s~~~~v~~Aa~~IasG~--advVLv 113 (498)
T PRK08257 85 -----SPVGGNSPQRLVNEAALRIAAGE--ADVALV 113 (498)
T ss_pred -----ecCCCHHHHHHHHHHHHHHHCCC--CCEEEE
Confidence 34567888888888888887643 367766
|
|
| >KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=84.86 E-value=3.7 Score=41.96 Aligned_cols=100 Identities=17% Similarity=0.160 Sum_probs=71.5
Q ss_pred cEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHc---CCCC
Q 012506 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYA---GFPE 127 (462)
Q Consensus 51 ~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~---Glp~ 127 (462)
.-+=+|-+++.++-- -...+.-.|...++.+++++.+|+++.|..+-||+-+-.-- .-..-..+...+ |= .
T Consensus 40 gKytIGLGq~~Mgfc----sdrEDi~Sl~ltvvs~Lmery~i~~~~IGRLEVGTETiiDK-SKSVKt~LMqLF~~sgN-t 113 (462)
T KOG1393|consen 40 GKYTIGLGQTQMGFC----SDREDIISLSLTVVSRLMERYNIDPDSIGRLEVGTETIIDK-SKSVKTVLMQLFEESGN-T 113 (462)
T ss_pred cceEeccCcceeccc----CchhhhhhhhHHHHHHHHHHhCCChhhcceEEecceecccc-chHHHHHHHHHhhhcCC-C
Confidence 346688888877532 12335678888999999999999999999999997643211 011112222333 44 4
Q ss_pred CcceEEecCCCchHHHHHHHHHHHHHccC
Q 012506 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGF 156 (462)
Q Consensus 128 ~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~ 156 (462)
.+..++..++|=+|..|+-.|.+-|++-.
T Consensus 114 dIEGiDttnACYGGtaALfnavnWiESss 142 (462)
T KOG1393|consen 114 DIEGIDTTNACYGGTAALFNAVNWIESSS 142 (462)
T ss_pred ccccccccccccccHHHHHHHhhhhhhcc
Confidence 57778888999999999999999999854
|
|
| >cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=84.23 E-value=9.9 Score=37.91 Aligned_cols=79 Identities=15% Similarity=0.105 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCC---CC-CcceEEecCCCchHHHHHHHHHHH
Q 012506 76 DDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGF---PE-TVPVRTVNRQCSSGLQAVADVAAA 151 (462)
Q Consensus 76 ~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Gl---p~-~~p~~~v~~~CsSgl~Ai~~Aa~~ 151 (462)
.+....+++++|++++++++|||.++.-....... ............+. +. ......-|..++|+...+..+...
T Consensus 204 ~~~~~~~i~~al~~agl~~~did~~~~h~~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~~~~ 282 (332)
T cd00825 204 AEGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIG-DVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLM 282 (332)
T ss_pred HHHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCC-CHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHHHHHH
Confidence 45567899999999999999999988755433222 11122222222332 10 111122356677888888888888
Q ss_pred HHcc
Q 012506 152 IKAG 155 (462)
Q Consensus 152 I~sG 155 (462)
.+.+
T Consensus 283 ~~~~ 286 (332)
T cd00825 283 LEHG 286 (332)
T ss_pred HhcC
Confidence 7777
|
Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). |
| >cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes | Back alignment and domain information |
|---|
Probab=83.15 E-value=8.2 Score=38.43 Aligned_cols=41 Identities=32% Similarity=0.380 Sum_probs=31.6
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----CHHHHHHHHHHcCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGLD 378 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda-----fa~~~~~~~e~LGl~ 378 (462)
..|++++|+++|++++|||.+-.-.. +.....+..+.||+.
T Consensus 53 ~~a~~~aL~~ag~~~~~Id~li~~~~~~~~~~~~~~~~i~~~lg~~ 98 (324)
T cd00827 53 VEAARRALERAGIDPDDIGLLIVATESPIDKGKSAATYLAELLGLT 98 (324)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCccHHHHHHHHcCCC
Confidence 57899999999999999999975322 233455677889996
|
They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues. |
| >TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | Back alignment and domain information |
|---|
Probab=83.00 E-value=5.2 Score=39.91 Aligned_cols=42 Identities=31% Similarity=0.442 Sum_probs=32.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----CHHHHHHHHHHcCCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGLDP 379 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda-----fa~~~~~~~e~LGl~~ 379 (462)
..|++++|+++|++++|||.+-.... +.....+..+.||+..
T Consensus 56 ~~A~~~al~~agl~~~~Id~~i~~~~~~~~~~~~~a~~l~~~lGl~~ 102 (318)
T TIGR00747 56 FEAAKRAIENAGISKDDIDLIIVATTTPDHAFPSAACMVQAYLGIKG 102 (318)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCChHHHHHHHHhCCCC
Confidence 57999999999999999998866432 3444566778899975
|
Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment. |
| >PRK06366 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=82.77 E-value=4.4 Score=42.11 Aligned_cols=75 Identities=17% Similarity=0.118 Sum_probs=51.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC---CH--HHHHHHHHHcCCCC-CC-CCCCCCccccCCccchHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA---FA--SQFVYCRNKLGLDP-EK-INVNGGALAIGHPLGTTGARCVATLLHEM 410 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda---fa--~~~~~~~e~LGl~~-~~-vn~~GG~~a~Ghp~gatG~~~~~~~~~qL 410 (462)
..+++++|+++||+++|||.+-+... +. .......+.+|++. .| .+++ ..++||+..+..+...+
T Consensus 31 ~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~v~--------~~caSg~~av~~Aa~~I 102 (388)
T PRK06366 31 GAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVTKYTVN--------VVCASGMLAVESAAREI 102 (388)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCCCCCCcceeee--------chhhHHHHHHHHHHHHH
Confidence 57999999999999999998876321 11 11334568899975 22 2332 35788888888888888
Q ss_pred HhcCCCCcEEEE
Q 012506 411 KRRGRDCRFGVI 422 (462)
Q Consensus 411 ~~~~~~~~~gl~ 422 (462)
+.... ++.|+
T Consensus 103 ~sG~~--d~vla 112 (388)
T PRK06366 103 MLGER--DLVIA 112 (388)
T ss_pred hcCCC--CEEEE
Confidence 76433 67664
|
|
| >PRK06157 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=82.76 E-value=3.7 Score=42.83 Aligned_cols=77 Identities=14% Similarity=0.135 Sum_probs=51.6
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC-----HHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHh
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAF-----ASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 412 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdaf-----a~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~ 412 (462)
..+++++|+++||+++|||.+-+-..+ ........+.+|+++.+... + +-.++||+..+..+...++-
T Consensus 32 ~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~~~~~~~a~~lGl~~~~~~~------v-~~~c~sg~~ai~~A~~~I~s 104 (398)
T PRK06157 32 VEAFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRLPNIPVTR------V-ENFCATGSEAFRGAVYAVAS 104 (398)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccccccccchhHHHHHHcCCCCCCEEE------E-ecccHHHHHHHHHHHHHHHC
Confidence 579999999999999999977552211 11124466789997533221 1 33468888888888888876
Q ss_pred cCCCCcEEEEE
Q 012506 413 RGRDCRFGVIS 423 (462)
Q Consensus 413 ~~~~~~~gl~~ 423 (462)
... ++.|+.
T Consensus 105 G~~--d~vlv~ 113 (398)
T PRK06157 105 GAY--DIALAL 113 (398)
T ss_pred CCC--CEEEEE
Confidence 533 666653
|
|
| >PRK08170 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=82.47 E-value=4 Score=42.96 Aligned_cols=75 Identities=15% Similarity=0.102 Sum_probs=50.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC-----HHHHHHHHHHcCCCC--CCCCCCCCccccCCccchHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAF-----ASQFVYCRNKLGLDP--EKINVNGGALAIGHPLGTTGARCVATLLHEM 410 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdaf-----a~~~~~~~e~LGl~~--~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL 410 (462)
..|++++|+++||+++|||.+-+...+ ........+.+|++. +.++++. .++||+..+..+...+
T Consensus 32 ~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p~~~v~~--------~CaSg~~al~~A~~~I 103 (426)
T PRK08170 32 VAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRLGCGEKVPAWTVQR--------NCASGMQALDSAAANI 103 (426)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHhCcCCCceeeeccc--------hhhHHHHHHHHHHHHH
Confidence 579999999999999999987664322 122345667899964 2334432 2677777777777777
Q ss_pred HhcCCCCcEEEE
Q 012506 411 KRRGRDCRFGVI 422 (462)
Q Consensus 411 ~~~~~~~~~gl~ 422 (462)
+... +++.|+
T Consensus 104 ~sG~--~d~vLv 113 (426)
T PRK08170 104 ALGR--ADLVLA 113 (426)
T ss_pred HCCC--CCEEEE
Confidence 7533 366665
|
|
| >cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism | Back alignment and domain information |
|---|
Probab=82.18 E-value=4.7 Score=41.35 Aligned_cols=77 Identities=22% Similarity=0.214 Sum_probs=49.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCCH-----HHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHh
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAFA-----SQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 412 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdafa-----~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~ 412 (462)
..|++++|+++||+++|||.+-+...+. .......+.||++..+... . +-.++||+..+..+...++.
T Consensus 21 ~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~a~~va~~lGl~~~~~~~------v-~~~c~sg~~al~~Aa~~I~s 93 (375)
T cd00829 21 AEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLLGKPATR------V-EAAGASGSAAVRAAAAAIAS 93 (375)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEecccccccccchHHHHHHHcCCCCcceee------E-eCccHHHHHHHHHHHHHHHh
Confidence 4789999999999999999887643322 2345567889996333211 1 22356666666666666664
Q ss_pred cCCCCcEEEEE
Q 012506 413 RGRDCRFGVIS 423 (462)
Q Consensus 413 ~~~~~~~gl~~ 423 (462)
.. +++.|+.
T Consensus 94 G~--~~~vlv~ 102 (375)
T cd00829 94 GL--ADVVLVV 102 (375)
T ss_pred CC--CCEEEEE
Confidence 33 3677654
|
The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. |
| >TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases | Back alignment and domain information |
|---|
Probab=81.75 E-value=4.5 Score=42.00 Aligned_cols=75 Identities=16% Similarity=0.100 Sum_probs=48.1
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC-----HHHHHHHHHHcCCCC-CC-CCCCCCccccCCccchHHHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAF-----ASQFVYCRNKLGLDP-EK-INVNGGALAIGHPLGTTGARCVATLLHEM 410 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdaf-----a~~~~~~~e~LGl~~-~~-vn~~GG~~a~Ghp~gatG~~~~~~~~~qL 410 (462)
..|++++|+++||+++|||.+-+...+ ..........+|+.. .+ ++++ ..+++|+..+..+...+
T Consensus 26 ~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~--------~~Casg~~al~~A~~~I 97 (386)
T TIGR01930 26 AAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAGLPESVPAYTVN--------RQCASGLQAVILAAQLI 97 (386)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCceeeeec--------chhhHHHHHHHHHHHHH
Confidence 579999999999999999998753221 222344567789874 22 2332 23456666666666666
Q ss_pred HhcCCCCcEEEE
Q 012506 411 KRRGRDCRFGVI 422 (462)
Q Consensus 411 ~~~~~~~~~gl~ 422 (462)
+.. .+++.|+
T Consensus 98 ~sG--~~~~vLv 107 (386)
T TIGR01930 98 RAG--EADVVVA 107 (386)
T ss_pred HCC--CCCEEEE
Confidence 643 3367775
|
This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt |
| >PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=81.43 E-value=5.6 Score=40.93 Aligned_cols=41 Identities=24% Similarity=0.393 Sum_probs=31.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec-----CCCHHHHHHHHHHcCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEIN-----EAFASQFVYCRNKLGLD 378 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eih-----dafa~~~~~~~e~LGl~ 378 (462)
..|++++|+++|++++|||.+-+. ..+........+.||+.
T Consensus 100 ~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~~p~~a~~v~~~Lgl~ 145 (372)
T PRK07515 100 VAAARQALARAGRTAEDIDAVIVACSNMQRAYPAMAIEIQQALGIE 145 (372)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhcCCC
Confidence 468899999999999999988653 23344456677889985
|
|
| >PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=81.19 E-value=5.9 Score=39.61 Aligned_cols=42 Identities=31% Similarity=0.447 Sum_probs=32.3
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC-----CHHHHHHHHHHcCCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA-----FASQFVYCRNKLGLDP 379 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda-----fa~~~~~~~e~LGl~~ 379 (462)
..|++++|+++|++++|||++-...+ +......+.+.||+.+
T Consensus 58 ~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~a~~l~~~lg~~~ 104 (325)
T PRK12879 58 IKAAERALARAGLDAEDIDLIIVATTTPDYLFPSTASQVQARLGIPN 104 (325)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCCC
Confidence 57999999999999999998865432 2344566778899864
|
|
| >PRK06066 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=81.15 E-value=10 Score=39.42 Aligned_cols=94 Identities=15% Similarity=0.121 Sum_probs=56.9
Q ss_pred EEEEEEEEeccCC---CCCCc-cHHHHHHHHHHHcC-CCC-CCccEEEec--CCCH---HHHHHHHHHcCCCCCCCCCCC
Q 012506 318 GVFRTFAAVGVDP---AIMGV-GPAVAIPAAVKSAG-LQL-DDIDLFEIN--EAFA---SQFVYCRNKLGLDPEKINVNG 386 (462)
Q Consensus 318 ~~i~g~~~~~~~p---~~~~~-~~~~Ai~~aL~~AG-l~~-~DID~~eih--dafa---~~~~~~~e~LGl~~~~vn~~G 386 (462)
+.|+|.+.+.... +.... -...|+.++|+.|| |++ +|||.+-+. +.|. .......+.||+...+.-.
T Consensus 6 vaIvG~g~t~~~~~~~~~s~~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~-- 83 (385)
T PRK06066 6 VAIVGIGWYGFRPTTPEVSFREMMFEAASRAYKDAGNINPRRDVDSFISCQEDFWEGIAIADEFAPDQIGGAMRPTMT-- 83 (385)
T ss_pred EEEEEeeecCCcCCCCCCCHHHHHHHHHHHHHHhcCCCCChhcCCEEEEecCcccCcccccchhHHHHcccCCCCeEE--
Confidence 3577877664332 21111 12579999999999 997 799977553 2221 1123355788885433211
Q ss_pred CccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEE
Q 012506 387 GALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVIS 423 (462)
Q Consensus 387 G~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~ 423 (462)
. +++|...+..+...++... ++..|+.
T Consensus 84 ----v----~~sg~~a~~~A~~aV~sG~--~d~vLv~ 110 (385)
T PRK06066 84 ----V----AGDGLQGLAHAVMHINSGL--ANVVVVE 110 (385)
T ss_pred ----E----eCcHHHHHHHHHHHHHcCC--CCEEEEE
Confidence 1 5677777778888777643 3677754
|
|
| >COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=80.80 E-value=6.3 Score=37.64 Aligned_cols=80 Identities=14% Similarity=0.083 Sum_probs=51.6
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHH
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIK 153 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~ 153 (462)
...+.+...+.++|.+++++.+|+|.|+|+.-.+.+. |--.+-.++..+.+..+.|.+.| |.+.++... .+
T Consensus 36 ~hse~l~~~i~~ll~~~~~~~~dld~iav~~GPGSFT-GlRIG~~~AkgLA~~l~iplvgv-----ssL~~~A~~---~~ 106 (220)
T COG1214 36 NHAERLMPMIDELLKEAGLSLQDLDAIAVAKGPGSFT-GLRIGVAFAKGLALALNIPLVGV-----SSLEALAQG---GA 106 (220)
T ss_pred cHHHHHHHHHHHHHHHcCCCHHHCCEEEEccCCCccc-chhhHHHHHHHHHHHcCCCEEEe-----CHHHHHHHh---hh
Confidence 4678889999999999999999999999987655544 43333333332222224588887 345554433 45
Q ss_pred ccCCCEEEE
Q 012506 154 AGFYDIGIG 162 (462)
Q Consensus 154 sG~~d~vLv 162 (462)
......+++
T Consensus 107 ~~~~~~v~v 115 (220)
T COG1214 107 EKNAGFVLV 115 (220)
T ss_pred ccCCCceEE
Confidence 545555555
|
|
| >cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs | Back alignment and domain information |
|---|
Probab=80.61 E-value=8 Score=39.54 Aligned_cols=42 Identities=36% Similarity=0.438 Sum_probs=32.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC----HHHHHHHHHHcCCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAF----ASQFVYCRNKLGLDP 379 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdaf----a~~~~~~~e~LGl~~ 379 (462)
..|++++|+++|++++|||++-...+. .....++.++||+.+
T Consensus 90 ~~Aa~~aL~~a~~~~~~Id~li~~s~~~~~~P~~a~~i~~~lgl~~ 135 (361)
T cd00831 90 EEAARGALDEAGLRPSDIDHLVVNTSTGNPTPSLDAMLINRLGLRP 135 (361)
T ss_pred HHHHHHHHHHhCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCc
Confidence 479999999999999999998764322 234457778999975
|
PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions. |
| >PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Probab=80.33 E-value=12 Score=38.92 Aligned_cols=100 Identities=18% Similarity=0.166 Sum_probs=60.9
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEE-EeccCCCCccccHHHHHHHHcCCCCC
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVV-GTVLAPGSQRASECRMAAFYAGFPET 128 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~viv-G~~~~~~~~~~~~a~~~a~~~Glp~~ 128 (462)
..+.|.|.+.+--... ....+... +-...++++||+++|++++|||.+.. |+.+... .....+.+...+|- .
T Consensus 236 ~~~~I~g~g~~~d~~~--~~~~~~~~-~~~~~a~~~Al~~Agl~~~dId~v~~hgtgt~~~--D~~E~~al~~~f~~--~ 308 (392)
T PRK09185 236 AAVALLGVGESSDAHH--MSAPHPEG-LGAILAMQQALADAGLAPADIGYINLHGTATPLN--DAMESRAVAAVFGD--G 308 (392)
T ss_pred CcEEEEEEEEeCCCCC--CCCCCCCH-HHHHHHHHHHHHHcCCCHHHccEEEeCCCCCcCC--CHHHHHHHHHHhCC--C
Confidence 4578888877532221 11122222 23357899999999999999998764 3322222 23455556656653 2
Q ss_pred cceE-----EecCCCchHHHHHHHHHHHHHccC
Q 012506 129 VPVR-----TVNRQCSSGLQAVADVAAAIKAGF 156 (462)
Q Consensus 129 ~p~~-----~v~~~CsSgl~Ai~~Aa~~I~sG~ 156 (462)
.|+. .-+..+++|...+..++..++.|.
T Consensus 309 ~pv~s~K~~~Gh~~~AaG~~~l~~~~~~l~~~~ 341 (392)
T PRK09185 309 VPCSSTKGLTGHTLGAAGAVEAAICWLALRHGL 341 (392)
T ss_pred CceeCCCcccccChhhcchHHHHHHHHHHhcCC
Confidence 3332 234567788888888888888774
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 462 | ||||
| 2wu9_A | 442 | Crystal Structure Of Peroxisomal Kat2 From Arabidop | 0.0 | ||
| 2c7y_A | 404 | Plant Enzyme Length = 404 | 0.0 | ||
| 2wua_A | 440 | Structure Of The Peroxisomal 3-Ketoacyl-Coa Thiolas | 0.0 | ||
| 2iik_A | 418 | Crystal Structure Of Human Peroxisomal Acetyl-Coa A | 1e-115 | ||
| 1afw_A | 393 | The 1.8 Angstrom Crystal Structure Of The Dimeric P | 1e-83 | ||
| 1pxt_A | 390 | The 2.8 Angstroms Structure Of Peroxisomal 3-Ketoac | 1e-83 | ||
| 1m1t_A | 392 | Biosynthetic Thiolase, Q64a Mutant Length = 392 | 8e-70 | ||
| 1dlu_A | 389 | Unliganded Biosynthetic Thiolase From Zoogloea Rami | 2e-69 | ||
| 2vu2_A | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Wit | 3e-69 | ||
| 2wku_A | 392 | Biosynthetic Thiolase From Z. Ramigera. The N316h M | 1e-68 | ||
| 2wkv_A | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 1e-68 | ||
| 2wl5_C | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 2e-68 | ||
| 1m1o_A | 392 | Crystal Structure Of Biosynthetic Thiolase, C89a Mu | 3e-68 | ||
| 1qfl_A | 389 | Biosynthetic Thiolase From Zoogloea Ramigera In Com | 4e-68 | ||
| 2wl4_C | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 5e-68 | ||
| 1m4s_A | 392 | Biosynthetic Thiolase, Cys89 Acetylated, Unliganded | 6e-68 | ||
| 1ulq_A | 401 | Crystal Structure Of Tt0182 From Thermus Thermophil | 1e-67 | ||
| 2wl6_A | 392 | Biosynthetic Thiolase From Z. Ramigera. The N316h-H | 1e-67 | ||
| 2wl5_A | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 3e-67 | ||
| 2wl4_D | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 7e-67 | ||
| 2wl4_A | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 7e-67 | ||
| 2wl4_B | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 1e-65 | ||
| 3ss6_A | 394 | Crystal Structure Of The Bacillus Anthracis Acetyl- | 3e-65 | ||
| 2wkt_C | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 8e-65 | ||
| 4dd5_A | 396 | Biosynthetic Thiolase (Thla1) From Clostridium Diff | 4e-64 | ||
| 4e1l_A | 395 | Crystal Structure Of Acetoacetyl-Coa Thiolase (Thla | 4e-64 | ||
| 2wkt_A | 392 | Biosynthetic Thiolase From Z. Ramigera. Complex Of | 1e-63 | ||
| 1wdk_C | 390 | Fatty Acid Beta-Oxidation Multienzyme Complex From | 1e-62 | ||
| 1wl4_A | 397 | Human Cytosolic Acetoacetyl-Coa Thiolase Complexed | 3e-59 | ||
| 3goa_A | 387 | Crystal Structure Of The Salmonella Typhimurium Fad | 1e-55 | ||
| 3svk_A | 407 | Crystal Structure Of Acetyl-Coa Acetyltransferase F | 1e-49 | ||
| 2ib7_A | 395 | Crystallographic And Kinetic Studies Of Human Mitoc | 6e-46 | ||
| 2f2s_A | 406 | Human Mitochondrial Acetoacetyl-Coa Thiolase Length | 3e-45 | ||
| 2ibu_A | 395 | Crystallographic And Kinetic Studies Of Human Mitoc | 1e-44 |
| >pdb|2WU9|A Chain A, Crystal Structure Of Peroxisomal Kat2 From Arabidopsis Thaliana Length = 442 | Back alignment and structure |
|
| >pdb|2C7Y|A Chain A, Plant Enzyme Length = 404 | Back alignment and structure |
|
| >pdb|2WUA|A Chain A, Structure Of The Peroxisomal 3-Ketoacyl-Coa Thiolase From Sunflower Length = 440 | Back alignment and structure |
|
| >pdb|2IIK|A Chain A, Crystal Structure Of Human Peroxisomal Acetyl-Coa Acyl Transferase 1 (Acaa1) Length = 418 | Back alignment and structure |
|
| >pdb|1AFW|A Chain A, The 1.8 Angstrom Crystal Structure Of The Dimeric Peroxisomal Thiolase Of Saccharomyces Cerevisiae Length = 393 | Back alignment and structure |
|
| >pdb|1PXT|A Chain A, The 2.8 Angstroms Structure Of Peroxisomal 3-Ketoacyl-Coa Thiolase Of Saccharomyces Cerevisiae: A Five Layered A-B-A- B-A Structure, Constructed From Two Core Domains Of Identical Topology Length = 390 | Back alignment and structure |
|
| >pdb|1M1T|A Chain A, Biosynthetic Thiolase, Q64a Mutant Length = 392 | Back alignment and structure |
|
| >pdb|1DLU|A Chain A, Unliganded Biosynthetic Thiolase From Zoogloea Ramigera Length = 389 | Back alignment and structure |
|
| >pdb|2VU2|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex With S- Pantetheine-11-pivalate. Length = 392 | Back alignment and structure |
|
| >pdb|2WKU|A Chain A, Biosynthetic Thiolase From Z. Ramigera. The N316h Mutant. Length = 392 | Back alignment and structure |
|
| >pdb|2WKV|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The N316d Mutant With Coenzyme A. Length = 392 | Back alignment and structure |
|
| >pdb|2WL5|C Chain C, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348n Mutant With Coenzyme A. Length = 392 | Back alignment and structure |
|
| >pdb|1M1O|A Chain A, Crystal Structure Of Biosynthetic Thiolase, C89a Mutant, Complexed With Acetoacetyl-Coa Length = 392 | Back alignment and structure |
|
| >pdb|1QFL|A Chain A, Biosynthetic Thiolase From Zoogloea Ramigera In Complex With A Reaction Intermediate. Length = 389 | Back alignment and structure |
|
| >pdb|2WL4|C Chain C, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348a Mutant With Coenzyme A Length = 392 | Back alignment and structure |
|
| >pdb|1M4S|A Chain A, Biosynthetic Thiolase, Cys89 Acetylated, Unliganded Form Length = 392 | Back alignment and structure |
|
| >pdb|1ULQ|A Chain A, Crystal Structure Of Tt0182 From Thermus Thermophilus Hb8 Length = 401 | Back alignment and structure |
|
| >pdb|2WL6|A Chain A, Biosynthetic Thiolase From Z. Ramigera. The N316h-H348n Mutant. Length = 392 | Back alignment and structure |
|
| >pdb|2WL5|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348n Mutant With Coenzyme A. Length = 392 | Back alignment and structure |
|
| >pdb|2WL4|D Chain D, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348a Mutant With Coenzyme A Length = 392 | Back alignment and structure |
|
| >pdb|2WL4|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348a Mutant With Coenzyme A Length = 392 | Back alignment and structure |
|
| >pdb|2WL4|B Chain B, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348a Mutant With Coenzyme A Length = 392 | Back alignment and structure |
|
| >pdb|3SS6|A Chain A, Crystal Structure Of The Bacillus Anthracis Acetyl-Coa Acetyltransferase Length = 394 | Back alignment and structure |
|
| >pdb|2WKT|C Chain C, Biosynthetic Thiolase From Z. Ramigera. Complex Of The N316a Mutant With Coenzyme A Length = 392 | Back alignment and structure |
|
| >pdb|4DD5|A Chain A, Biosynthetic Thiolase (Thla1) From Clostridium Difficile Length = 396 | Back alignment and structure |
|
| >pdb|4E1L|A Chain A, Crystal Structure Of Acetoacetyl-Coa Thiolase (Thla2) From Clostridium Difficile Length = 395 | Back alignment and structure |
|
| >pdb|2WKT|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The N316a Mutant With Coenzyme A. Length = 392 | Back alignment and structure |
|
| >pdb|1WDK|C Chain C, Fatty Acid Beta-Oxidation Multienzyme Complex From Pseudomonas Fragi, Form I (Native2) Length = 390 | Back alignment and structure |
|
| >pdb|1WL4|A Chain A, Human Cytosolic Acetoacetyl-Coa Thiolase Complexed With Coa Length = 397 | Back alignment and structure |
|
| >pdb|3GOA|A Chain A, Crystal Structure Of The Salmonella Typhimurium Fada 3- Ketoacyl-Coa Thiolase Length = 387 | Back alignment and structure |
|
| >pdb|3SVK|A Chain A, Crystal Structure Of Acetyl-Coa Acetyltransferase From Mycobacterium Avium Length = 407 | Back alignment and structure |
|
| >pdb|2IB7|A Chain A, Crystallographic And Kinetic Studies Of Human Mitochondrial Acetoacetyl-Coa Thiolase (T2): The Importance Of Potassium And Chloride For Its Structure And Function Length = 395 | Back alignment and structure |
|
| >pdb|2F2S|A Chain A, Human Mitochondrial Acetoacetyl-Coa Thiolase Length = 406 | Back alignment and structure |
|
| >pdb|2IBU|A Chain A, Crystallographic And Kinetic Studies Of Human Mitochondrial Acetoacetyl-coa Thiolase (t2): The Importance Of Potassium And Chloride For Its Structure And Function Length = 395 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A Length = 442 | Back alignment and structure |
|---|
Score = 715 bits (1849), Expect = 0.0
Identities = 382/439 (87%), Positives = 409/439 (93%)
Query: 22 SHNYESILSASACAAGDSAAYHRTSVYGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAP 81
+H++ + AGDSAAY RTS+YGDDVVIVAA+RT LCKSKRG FKDTYPDDLLAP
Sbjct: 2 AHHHHHHVDDDDKMAGDSAAYQRTSLYGDDVVIVAAHRTPLCKSKRGNFKDTYPDDLLAP 61
Query: 82 VLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSG 141
VL+A+IEKTN++PSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV VRTVNRQCSSG
Sbjct: 62 VLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVAVRTVNRQCSSG 121
Query: 142 LQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSE 201
LQAVADVAAAIKAGFYDIGIGAGLESMT NPMAWEGSVNP VK F QAQNCLLPMGVTSE
Sbjct: 122 LQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWEGSVNPAVKKFAQAQNCLLPMGVTSE 181
Query: 202 NVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVD 261
NVA RFGV+R+EQDQAAVDSHRKAAAATAAGKFKDEIIPV TK+VDPKTGDEKP+T+SVD
Sbjct: 182 NVAQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKPITVSVD 241
Query: 262 DGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFR 321
DGIRP T+++ L KLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM+KGLP+LGVFR
Sbjct: 242 DGIRPTTTLASLGKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPVLGVFR 301
Query: 322 TFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEK 381
TFAAVGVDPAIMG+GPAVAIPAAVK+AGL+LDDIDLFEINEAFASQFVYCRNKLGLDPEK
Sbjct: 302 TFAAVGVDPAIMGIGPAVAIPAAVKAAGLELDDIDLFEINEAFASQFVYCRNKLGLDPEK 361
Query: 382 INVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFERGDC 441
INVNGGA+AIGHPLG TGARCVATLLHEMKRRG+DCRFGV+SMCIGTGMGAAAVFERGD
Sbjct: 362 INVNGGAMAIGHPLGATGARCVATLLHEMKRRGKDCRFGVVSMCIGTGMGAAAVFERGDG 421
Query: 442 ADELCNVRKVESNNFLSKD 460
DEL N RKVE+ LSKD
Sbjct: 422 VDELRNARKVEAQGLLSKD 440
|
| >2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} Length = 418 | Back alignment and structure |
|---|
Score = 648 bits (1675), Expect = 0.0
Identities = 232/428 (54%), Positives = 303/428 (70%), Gaps = 12/428 (2%)
Query: 12 LEHLRPSNSSSHNYESILSASACAAGDSAAYHRTSVYGDDVVIVAAYRTALCKSKRGGFK 71
+ H +S L + A SA DVV+V RTA+C++ RGGFK
Sbjct: 1 MHHHHHHSSGVDLGTENLYFQSMAPQASA---------ADVVVVHGRRTAICRAGRGGFK 51
Query: 72 DTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPV 131
DT PD+LL+ V+ AV++ N+ P ++GDI VG VL PG A R+A F + PETVP+
Sbjct: 52 DTTPDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPG-AGAIMARIAQFLSDIPETVPL 110
Query: 132 RTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQN 191
TVNRQCSSGLQAVA +A I+ G YDIG+ G+ESM++ G++ ++ E+A++
Sbjct: 111 STVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSLADRGNPGNITSRLMEKEKARD 170
Query: 192 CLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTG 251
CL+PMG+TSENVA RFG++R++QD A+ S +KAA A + G F+ EI+PV T + D K G
Sbjct: 171 CLIPMGITSENVAERFGISREKQDTFALASQQKAARAQSKGCFQAEIVPVTTTVHDDK-G 229
Query: 252 DEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMR 311
++ +T++ D+GIRP+T++ LAKLKP FKKDG+TTAGNSSQVSDGA A+LL +RS A
Sbjct: 230 TKRSITVTQDEGIRPSTTMEGLAKLKPAFKKDGSTTAGNSSQVSDGAAAILLARRSKAEE 289
Query: 312 KGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYC 371
GLPILGV R++A VGV P IMG+GPA AIP A++ AGL + D+D+FEINEAFASQ YC
Sbjct: 290 LGLPILGVLRSYAVVGVPPDIMGIGPAYAIPVALQKAGLTVSDVDIFEINEAFASQAAYC 349
Query: 372 RNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMG 431
KL L PEK+N GGA+A+GHPLG TGAR V TLL+E+KRRG+ +GV+SMCIGTGMG
Sbjct: 350 VEKLRLPPEKVNPLGGAVALGHPLGCTGARQVITLLNELKRRGKR-AYGVVSMCIGTGMG 408
Query: 432 AAAVFERG 439
AAAVFE
Sbjct: 409 AAAVFEYP 416
|
| >1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A Length = 393 | Back alignment and structure |
|---|
Score = 608 bits (1570), Expect = 0.0
Identities = 188/397 (47%), Positives = 252/397 (63%), Gaps = 22/397 (5%)
Query: 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEK----TNVDPSEVGDIVVGTV 105
+DVVIVAA R+A+ K +G FKD D LL L I + D + + ++ G V
Sbjct: 10 EDVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNV 69
Query: 106 LAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGL 165
L G A+E R A +G P + P +NRQCSSGL AV D+A IK G DIG+ G+
Sbjct: 70 LNVG-AGATEHRAACLASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGV 128
Query: 166 ESMTVNPMA---WEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSH 222
ESMT N + +++ +A+ CL+PMG+T+ENVA F ++RK+QD+ A +S+
Sbjct: 129 ESMTNNYKNVNPLGMISSEELQKNREAKKCLIPMGITNENVAANFKISRKDQDEFAANSY 188
Query: 223 RKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK 282
+KA A G F+DEI+P+ D+G RPN + L+ ++P F K
Sbjct: 189 QKAYKAKNEGLFEDEILPIKLP---------DGSICQSDEGPRPNVTAESLSSIRPAFIK 239
Query: 283 D-GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAI 341
D GTTTAGN+SQVSDG VLL +RSVA + LP+LG + F VGV P IMGVGPA AI
Sbjct: 240 DRGTTTAGNASQVSDGVAGVLLARRSVANQLNLPVLGRYIDFQTVGVPPEIMGVGPAYAI 299
Query: 342 PAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGAR 401
P +++ GLQ+ DID+FEINEAFA+Q +YC +KLG+D K+N GGA+A+GHPLG TGAR
Sbjct: 300 PKVLEATGLQVQDIDIFEINEAFAAQALYCIHKLGIDLNKVNPRGGAIALGHPLGCTGAR 359
Query: 402 CVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438
VAT+L E+K+ + GV+SMCIGTGMGAAA+F +
Sbjct: 360 QVATILRELKKD----QIGVVSMCIGTGMGAAAIFIK 392
|
| >3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} Length = 387 | Back alignment and structure |
|---|
Score = 489 bits (1261), Expect = e-173
Identities = 162/393 (41%), Positives = 223/393 (56%), Gaps = 14/393 (3%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKT-NVDPSEVGDIVVGTVLAPG 109
VVIV A RT + +SK G F++ +DL A ++++++ + ++ + + DI G V
Sbjct: 3 QVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPSLTAATLDDIYWGCVQQTL 62
Query: 110 SQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMT 169
Q + R AA A P +VP TVNR C S +QA+ D A I G + + G+E M
Sbjct: 63 EQGFNIARNAALLAEIPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQVCLVGGVEHMG 122
Query: 170 VNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAAT 229
PM+ +P + MG+T+E ++ G++R+ QDQ A SH +A AAT
Sbjct: 123 HVPMSHGVDFHPGLS--RNVAKAAGMMGLTAEMLSRLHGISREMQDQFAARSHARAWAAT 180
Query: 230 AAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK-DGTTTA 288
+G FK EIIP D + D+ IRP T+V L+ L+P F GT TA
Sbjct: 181 QSGAFKTEIIPTGGH-----DADGVLKQFNYDEVIRPETTVEALSTLRPAFDPVSGTVTA 235
Query: 289 GNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSA 348
G SS +SDGA A+L+M S A GL R+ A VG DP+IMG GP A A+K A
Sbjct: 236 GTSSALSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCDPSIMGYGPVPASKLALKKA 295
Query: 349 GLQLDDIDLFEINEAFASQFVYCRNKLGLDP---EKINVNGGALAIGHPLGTTGARCVAT 405
GL DID+FE+NEAFA+Q + C LGL EKIN+NGGA+A+GHPLG +GAR T
Sbjct: 296 GLSASDIDVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTT 355
Query: 406 LLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438
L++ M+R+ +FG+ +MCIG G G A VFER
Sbjct: 356 LINLMERKDA--QFGLATMCIGLGQGIATVFER 386
|
| >1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* Length = 390 | Back alignment and structure |
|---|
Score = 483 bits (1246), Expect = e-170
Identities = 162/393 (41%), Positives = 221/393 (56%), Gaps = 14/393 (3%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEK-TNVDPSEVGDIVVGTVLAPG 109
DVVIV RT + +SK G ++T +D+ A ++ V+E+ + VDP EV D++ G V
Sbjct: 6 DVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTL 65
Query: 110 SQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMT 169
Q + RMA+ P T +TV+R C S + A+ A AI G D+ + G+E M
Sbjct: 66 EQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMG 125
Query: 170 VNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAAT 229
M V+P A MG+T+E + G++R++QD AV SH+ A AT
Sbjct: 126 HVSMM--HGVDPNPHMSLYAAKASGMMGLTAEMLGKMHGISREQQDAFAVRSHQLAHKAT 183
Query: 230 AAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFK-KDGTTTA 288
GKFKDEIIP+ + D+ IRP+T++ LA LKP F K GT TA
Sbjct: 184 VEGKFKDEIIPMQGY-----DENGFLKIFDYDETIRPDTTLESLAALKPAFNPKGGTVTA 238
Query: 289 GNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSA 348
G SSQ++DGA +++M A GL L V R+ A GVDPAIMG GP A A+K A
Sbjct: 239 GTSSQITDGASCMIVMSAQRAKDLGLEPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRA 298
Query: 349 GLQLDDIDLFEINEAFASQFVYCRNKLGL---DPEKINVNGGALAIGHPLGTTGARCVAT 405
GL + DID E+NEAFA+Q + L + EK+N++GGA+A+GHP G +GAR T
Sbjct: 299 GLNMADIDFIELNEAFAAQALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGT 358
Query: 406 LLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438
LL+ MK+ G FG+ +MCIG G G A VFER
Sbjct: 359 LLNVMKQNGG--TFGLSTMCIGLGQGIATVFER 389
|
| >1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Length = 401 | Back alignment and structure |
|---|
Score = 446 bits (1151), Expect = e-156
Identities = 167/411 (40%), Positives = 231/411 (56%), Gaps = 37/411 (9%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS 110
+ IV A RT + K G PDDLLA L +++++ V EV D+ G G
Sbjct: 3 EAWIVEAVRTPIGK-HGGALASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGE 61
Query: 111 QRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTV 170
+ RMA AGFP V TVNR C SGL+AVA A AI AG + IG+G+ESM+
Sbjct: 62 DNRNVARMALLLAGFPVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSR 121
Query: 171 NPMAWEGS--------------------VNPKVK-AFEQAQNCLLPMGVTSENVAHRFGV 209
P A VNPK++ + MG T+EN+A +G+
Sbjct: 122 APYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGT-----ESMGETAENLAEMYGI 176
Query: 210 TRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTS 269
R+EQD+ A+ SH+KA A G+F+DE++PV K ++ + + D+G R +TS
Sbjct: 177 RREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVK------RGKEEILVEQDEGPRRDTS 230
Query: 270 VSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVD 329
+ +LA L+PVF++ GT TAGNSS ++DGA AVLL+ A GL L R A GV
Sbjct: 231 LEKLAALRPVFREGGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGLRPLARVRAIAVAGVP 290
Query: 330 PAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGL--DPEKINVNGG 387
P IMG+GP A A++ AGL D+ L E+NEAFA+Q + + L + +++N NGG
Sbjct: 291 PRIMGIGPVPATRKALERAGLSFSDLGLIELNEAFAAQALAVLREWSLSMEDQRLNPNGG 350
Query: 388 ALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438
A+A+GHPLG +GAR + TL+HEM+RR +FG+ +MCIG G G A V E
Sbjct: 351 AIALGHPLGASGARILTTLVHEMRRRKV--QFGLATMCIGVGQGIAVVVEG 399
|
| >3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} Length = 394 | Back alignment and structure |
|---|
Score = 444 bits (1146), Expect = e-155
Identities = 150/403 (37%), Positives = 231/403 (57%), Gaps = 30/403 (7%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS 110
+VVI AA R+ + + G K+ P +L PVL+ +++ V+P EV ++++G + +
Sbjct: 6 NVVITAAVRSPI-GTFGGALKNVTPVELAVPVLQEAVKRGGVEPHEVDEVILGHCI-QRT 63
Query: 111 QRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTV 170
A+ R AA AGFP+TV T+ RQCSSG+QA+ A I+ G ++ + G+E+M+
Sbjct: 64 DEANTARTAALAAGFPDTVTGYTIQRQCSSGMQAIMSAAMQIQLGVSEVVVAGGVEAMSS 123
Query: 171 NPMAWEGS------VNPKVK---------AFEQAQNCLLPMGVTSENVAHRFGVTRKEQD 215
+P A + + +++ + MG T+EN+ ++ +TR+EQD
Sbjct: 124 SPYALKQHRWGQRLQHGEIRDTVWEVLEDPIHH-----IMMGETAENLVEQYEITREEQD 178
Query: 216 QAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAK 275
+ A+ SH A A +G F D+I+P+ K K V S D+ R + + +LA
Sbjct: 179 EVALRSHTLALKAIESGYFDDQIVPITIK------ERRKEVVFSKDEHPRADITAEKLAG 232
Query: 276 LKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGV 335
LKP F+KDG+ TAGN+S ++DG+ ++LM A KGL L ++ GVDP IMG+
Sbjct: 233 LKPAFRKDGSVTAGNASGLNDGSAVLVLMSEEKAKEKGLQPLARIVGYSVAGVDPKIMGI 292
Query: 336 GPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPL 395
GPA AI ++ L+D DL EINEAFA+Q++ +L LD EK+NVNG + +GHP+
Sbjct: 293 GPAPAIRKGLEKVDWSLEDADLLEINEAFAAQYLAVEKELDLDREKVNVNGSGVGLGHPI 352
Query: 396 GTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438
G TGAR +L+HE+KRRG G+ S+C+G G+G A E
Sbjct: 353 GCTGARITVSLIHELKRRGL--EKGIASLCVGGGIGVALFIEA 393
|
| >3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} Length = 407 | Back alignment and structure |
|---|
Score = 444 bits (1144), Expect = e-155
Identities = 140/413 (33%), Positives = 209/413 (50%), Gaps = 39/413 (9%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTN-VDPSEVGDIVVGTVLAPG 109
+ I A RT K K G + P +L+ ++ + + +D + + D+++G V G
Sbjct: 8 EAFIYEAIRTPRGKQKNGSLTEVKPLNLVVGLVDELRRRYPDLDETLISDMILGVVSPVG 67
Query: 110 SQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMT 169
Q R A AG PET +NR C+SGL+AV A +++G+ D+ + G+ESM+
Sbjct: 68 DQGGDIARTAVLAAGLPETTGGVQLNRFCASGLEAVNTAAQKVRSGWDDLVLAGGVESMS 127
Query: 170 VNPMAWEG---SVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAA 226
PM +G + +P+ + +P G+ ++ +A G +R++ D A+ S +KAA
Sbjct: 128 RVPMGSDGGAWATDPETNY----RIGFVPQGIGADLIATLEGFSREDVDAYALRSQQKAA 183
Query: 227 AATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTT 286
AA + G F ++PV V + D+ +RP+T++ LAKLK F G
Sbjct: 184 AAWSGGYFAKSVVPV--------RDQNGLVILDHDEHMRPDTTMEGLAKLKTAFDGVGEM 235
Query: 287 ---------------------TAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAA 325
T GNSS + DGA VL+ +GL A
Sbjct: 236 GGFDDVALQKYHWVEKINHVHTGGNSSGIVDGAALVLVGSEKAGKSQGLTPRARIVATAT 295
Query: 326 VGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVN 385
G DP IM GP A + AGL +DDIDLFE+NEAFAS + + L + EK+NVN
Sbjct: 296 SGSDPVIMLTGPTPATRKVLDRAGLTIDDIDLFELNEAFASVVLKFQKDLNIPDEKLNVN 355
Query: 386 GGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438
GGA+A+GHPLG TGA T++ E++RR R +I++CIG GMG A + ER
Sbjct: 356 GGAIAMGHPLGATGAMITGTMVDELERRNA--RRALITLCIGGGMGVATIIER 406
|
| >4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} Length = 396 | Back alignment and structure |
|---|
Score = 438 bits (1129), Expect = e-152
Identities = 153/405 (37%), Positives = 226/405 (55%), Gaps = 33/405 (8%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVL-APG 109
+VVI +A RTA+ G FK +L K I++ N+ P + + ++G VL A
Sbjct: 8 EVVIASAARTAVGSFG-GAFKSVSAVELGVTAAKEAIKRANITPDMIDESLLGGVLTAGL 66
Query: 110 SQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMT 169
Q + R A AG P P T+N C SGL++V+ + I G DI + G E+M+
Sbjct: 67 GQNIA--RQIALGAGIPVEKPAMTINIVCGSGLRSVSMASQLIALGDADIMLVGGAENMS 124
Query: 170 VNPMAWEGS------VNPKVK----------AFEQAQNCLLPMGVTSENVAHRFGVTRKE 213
++P + + F MG+T+EN+A ++ +TR+E
Sbjct: 125 MSPYLVPSARYGARMGDAAFVDSMIKDGLSDIFNN-----YHMGITAENIAEQWNITREE 179
Query: 214 QDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSEL 273
QD+ A+ S KA A A GKF +EI+PV K G + + D+ I+P T++ +L
Sbjct: 180 QDELALASQNKAEKAQAEGKFDEEIVPVVIK------GRKGDTVVDKDEYIKPGTTMEKL 233
Query: 274 AKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIM 333
AKL+P FKKDGT TAGN+S ++DGA +++M + A G+ L ++ GVDP IM
Sbjct: 234 AKLRPAFKKDGTVTAGNASGINDGAAMLVVMAKEKAEELGIEPLATIVSYGTAGVDPKIM 293
Query: 334 GVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGH 393
G GP A A+++A + ++DIDL E NEAFA+Q V L +D K+NVNGGA+AIGH
Sbjct: 294 GYGPVPATKKALEAANMTIEDIDLVEANEAFAAQSVAVIRDLNIDMNKVNVNGGAIAIGH 353
Query: 394 PLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438
P+G +GAR + TLL+EMKRR + G+ ++CIG GMG + +R
Sbjct: 354 PIGCSGARILTTLLYEMKRRDA--KTGLATLCIGGGMGTTLIVKR 396
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} Length = 395 | Back alignment and structure |
|---|
Score = 436 bits (1124), Expect = e-152
Identities = 157/404 (38%), Positives = 232/404 (57%), Gaps = 30/404 (7%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS 110
DVVIV+A RT + S G FK+T L +K I + ++ SE+ ++++G VL G
Sbjct: 6 DVVIVSAVRTPI-GSFGGVFKNTSAVQLGTIAVKEAISRVGLNLSEIDEVIIGNVLQTG- 63
Query: 111 QRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTV 170
+ R A AG P +VP TVN+ C SGL++V A +I +G D+ I G E+M+
Sbjct: 64 LGQNVARQIAINAGIPNSVPSYTVNKLCGSGLKSVQLAAQSITSGENDVVIAGGTENMSQ 123
Query: 171 NPMAWEGS------VNPKVK----------AFEQAQNCLLPMGVTSENVAHRFGVTRKEQ 214
P + N + AF Q MG+T+EN+A +F TR+ Q
Sbjct: 124 APYIVPTARFGSKMGNITMVDSMLTDGLIDAFNQ-----YHMGITAENIATKFEFTREMQ 178
Query: 215 DQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELA 274
D+ A++S KA A +FK+EI+PV I + G TI D+ + + L+
Sbjct: 179 DKLALESQNKAENAIKNNRFKEEIVPVDVLI---RRGK--IETIDKDEYPKLGMTFEGLS 233
Query: 275 KLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMG 334
KLKP FKKDGT TAGN+S ++DGA ++LM + A G+ L +++A+ GV+P +MG
Sbjct: 234 KLKPAFKKDGTVTAGNASGINDGAAMLILMSQQKADELGIRPLAKIKSYASAGVEPEVMG 293
Query: 335 VGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHP 394
GP A A+K AGL ++DIDL E NEAFA+Q + +N+L +D K+NVNGGA+A+GHP
Sbjct: 294 TGPIPATRKALKKAGLSINDIDLIEANEAFAAQALAVKNELQIDSSKLNVNGGAIALGHP 353
Query: 395 LGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438
+G +GAR + TL++EM++R G+ ++CIG G G + V R
Sbjct: 354 IGASGARILVTLIYEMQKRKV--ETGLATLCIGGGQGISMVVSR 395
|
| >2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... Length = 392 | Back alignment and structure |
|---|
Score = 426 bits (1097), Expect = e-148
Identities = 167/408 (40%), Positives = 230/408 (56%), Gaps = 38/408 (9%)
Query: 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPG 109
+VI +A RTA+ S G F +T +L A V+ AV+E+ V EV ++++G VL P
Sbjct: 3 PSIVIASAARTAV-GSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVL-PA 60
Query: 110 SQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMT 169
+ + R AA AG P+ +N+ C SGL+AVA I G I + G+ESM+
Sbjct: 61 GEGQNPARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMS 120
Query: 170 VNP-------------------MAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVT 210
+ P M +G + AF MG T+ENVA ++ ++
Sbjct: 121 MAPHCAHLRGGVKMGDFKMIDTMIKDGLTD----AFYG-----YHMGTTAENVAKQWQLS 171
Query: 211 RKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSV 270
R EQD AV S KA AA G+FKDEI+P K G + +T+ D+ IR ++
Sbjct: 172 RDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVK------GRKGDITVDADEYIRHGATL 225
Query: 271 SELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDP 330
+AKL+P F K+GT TAGN+S ++DGA A LLM + A R+G+ LG ++A VGVDP
Sbjct: 226 DSMAKLRPAFDKEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDP 285
Query: 331 AIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALA 390
+MG GP A A++ AG ++ D+DL E NEAFA+Q LG DP +NVNGGA+A
Sbjct: 286 KVMGTGPIPASRKALERAGWKIGDLDLVEANEAFAAQACAVNKDLGWDPSIVNVNGGAIA 345
Query: 391 IGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438
IGHP+G +GAR + TLL EMKRRG R G+ ++CIG GMG A E
Sbjct: 346 IGHPIGASGARILNTLLFEMKRRGA--RKGLATLCIGGGMGVAMCIES 391
|
| >1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A Length = 397 | Back alignment and structure |
|---|
Score = 411 bits (1058), Expect = e-142
Identities = 157/410 (38%), Positives = 230/410 (56%), Gaps = 40/410 (9%)
Query: 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPG 109
D VVIV+A RT + S G DL + V+K V+++ V P +V +++ G VLA G
Sbjct: 6 DPVVIVSAARTII-GSFNGALAAVPVQDLGSTVIKEVLKRATVAPEDVSEVIFGHVLAAG 64
Query: 110 SQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMT 169
+ R A+ AG P +VP + C SGL+AV +I G I + G+E+M+
Sbjct: 65 -CGQNPVRQASVGAGIPYSVPAWSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMENMS 123
Query: 170 VNP-------------------MAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVT 210
P + +G + AF MG+T+ENVA ++ V+
Sbjct: 124 KAPHLAYLRTGVKIGEMPLTDSILCDGLTD----AFHN-----CHMGITAENVAKKWQVS 174
Query: 211 RKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSV 270
R++QD+ AV S + A AG F EI+PV V + G + + D+ R +++
Sbjct: 175 REDQDKVAVLSQNRTENAQKAGHFDKEIVPVL---VSTRKGL---IEVKTDEFPRHGSNI 228
Query: 271 SELAKLKPVFKKDGTT--TAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV 328
++KLKP F DGT T N+S ++DGA AV+LMK+S A ++GL L +++ VGV
Sbjct: 229 EAMSKLKPYFLTDGTGTVTPANASGINDGAAAVVLMKKSEADKRGLTPLARIVSWSQVGV 288
Query: 329 DPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGA 388
+P+IMG+GP AI AV AG L+D+D+FEINEAFA+ +LGL+PEK+N+ GGA
Sbjct: 289 EPSIMGIGPIPAIKQAVTKAGWSLEDVDIFEINEAFAAVSAAIVKELGLNPEKVNIEGGA 348
Query: 389 LAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438
+A+GHPLG +G R + TLLH ++R GR GV ++CIG GMG A +R
Sbjct: 349 IALGHPLGASGCRILVTLLHTLERMGR--SRGVAALCIGGGMGIAMCVQR 396
|
| >2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* Length = 395 | Back alignment and structure |
|---|
Score = 369 bits (951), Expect = e-126
Identities = 127/408 (31%), Positives = 207/408 (50%), Gaps = 40/408 (9%)
Query: 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPG 109
+VVIV+A RT + S G L + ++ IEK + EV + +G VL G
Sbjct: 8 KEVVIVSATRTPI-GSFLGSLSLLPATKLGSIAIQGAIEKAGIPKEEVKEAYMGNVLQGG 66
Query: 110 SQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMT 169
+A R A AG P + P T+N+ C+SG++A+ + ++ G D+ + G+ESM+
Sbjct: 67 EGQAP-TRQAVLGAGLPISTPCTTINKVCASGMKAIMMASQSLMCGHQDVMVAGGMESMS 125
Query: 170 VNP------------------MAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTR 211
P + +G + + + + MG +EN A + + R
Sbjct: 126 NVPYVMNRGSTPYGGVKLEDLIVKDGLTD----VYNK-----IHMGSCAENTAKKLNIAR 176
Query: 212 KEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVS 271
EQD A++S+ ++ AA AGKF +E+IPV +P + +D S
Sbjct: 177 NEQDAYAINSYTRSKAAWEAGKFGNEVIPVTVT------VKGQPDVVVKEDEEYKRVDFS 230
Query: 272 ELAKLKPVFKKD-GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDP 330
++ KLK VF+K+ GT TA N+S ++DGA A++LM A R + L FA V+P
Sbjct: 231 KVPKLKTVFQKENGTVTAANASTLNDGAAALVLMTADAAKRLNVTPLARIVAFADAAVEP 290
Query: 331 AIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALA 390
+ P A +K GL+ +DI ++E+NEAF+ + L +DP+K+N+NGGA++
Sbjct: 291 IDFPIAPVYAASMVLKDVGLKKEDIAMWEVNEAFSLVVLANIKMLEIDPQKVNINGGAVS 350
Query: 391 IGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438
+GHP+G +GAR V L H +K+ G+ S+C G G +A + ++
Sbjct: 351 LGHPIGMSGARIVGHLTHALKQGEY----GLASICNGGGGASAMLIQK 394
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688 | Back alignment and structure |
|---|
Score = 46.0 bits (109), Expect = 3e-05
Identities = 21/159 (13%), Positives = 46/159 (28%), Gaps = 28/159 (17%)
Query: 295 SDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG-------VDPAIMGVGPAVAIPAAVKS 347
+ GAG ++M+ +A++ G+PI G+ A P + A ++VK
Sbjct: 1180 AQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHSSVKY 1239
Query: 348 AGLQLD--------DIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTG 399
A L+ +I + ++ + + +
Sbjct: 1240 ASPNLNMKYRKRQLVTREAQIKDWVENELEA-----------LKLEAEEIPSEDQNEFLL 1288
Query: 400 ARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438
R + +E + + R + A
Sbjct: 1289 ER-TREIHNEAESQLRAAQQQ-WGNDFYKRDPRIAPLRG 1325
|
| >3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* Length = 357 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 4e-04
Identities = 15/83 (18%), Positives = 23/83 (27%), Gaps = 19/83 (22%)
Query: 340 AIPAAVKSAGLQLDDIDLF-------EINEAFASQFVYCRNKLGLDPEKINVNGGALAIG 392
A A++ AG ++DI + LGL E+ + G
Sbjct: 243 AKTQALEDAGTAIEDIAHAVIPVSRRGTGHELH-------DLLGLPDERTSWA-----YG 290
Query: 393 HPLGTTGARCVATLLHEMKRRGR 415
G GA L +
Sbjct: 291 RTTGHVGAGDQYAGLAHLVENAL 313
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 462 | |||
| 2wu9_A | 442 | 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o | 100.0 | |
| 2iik_A | 418 | 3-ketoacyl-COA thiolase, peroxisomal; fatty acid m | 100.0 | |
| 3goa_A | 387 | 3-ketoacyl-COA thiolase; metabolism, fatty acid, p | 100.0 | |
| 3svk_A | 407 | Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, | 100.0 | |
| 4dd5_A | 396 | Acetyl-COA acetyltransferase; structural genomics, | 100.0 | |
| 3ss6_A | 394 | Acetyl-COA acetyltransferase; structural genomics, | 100.0 | |
| 1afw_A | 393 | 3-ketoacetyl-COA thiolase; fatty acid metabolism; | 100.0 | |
| 1ulq_A | 401 | Putative acetyl-COA acetyltransferase; structural | 100.0 | |
| 1wl4_A | 397 | Acetyl-coenzyme A acetyltransferase 2; thiolase fo | 100.0 | |
| 4e1l_A | 395 | Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, | 100.0 | |
| 2vu1_A | 392 | Acetyl-COA acetyltransferase; acyltransferase, PHB | 100.0 | |
| 1wdk_C | 390 | 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame | 100.0 | |
| 2ib8_A | 395 | Acetyl-COA acetyltransferase; thiolase fold, potas | 100.0 | |
| 4egv_A | 520 | Acetyl-COA acetyltransferase; NEW SUB-family, thio | 100.0 | |
| 1e5m_A | 416 | KAS II, beta ketoacyl acyl carrier protein synthas | 100.0 | |
| 3kzu_A | 428 | 3-oxoacyl-(acyl-carrier-protein) synthase II; seat | 100.0 | |
| 3ho9_A | 427 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, | 100.0 | |
| 3o04_A | 413 | LMO2201 protein, beta-keto-acyl carrier protein sy | 100.0 | |
| 1j3n_A | 408 | 3-oxoacyl-(acyl-carrier protein) synthase II; cond | 100.0 | |
| 3mqd_A | 428 | Beta-ketoacyl synthase; ssgcid, ALS collaborative | 99.98 | |
| 2wge_A | 416 | 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta | 99.97 | |
| 2gqd_A | 437 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli | 99.97 | |
| 2iwz_A | 438 | 3-oxoacyl-[acyl-carrier-protein] synthase; mitocho | 99.97 | |
| 2ix4_A | 431 | 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke | 99.97 | |
| 4ddo_A | 451 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci | 99.97 | |
| 2gp6_A | 434 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol | 99.97 | |
| 1tqy_B | 415 | Actinorhodin polyketide putative beta-ketoacyl SY; | 99.97 | |
| 1ox0_A | 430 | Beta ketoacyl-acyl carrier protein synthase; trans | 99.97 | |
| 1tqy_A | 424 | Beta-ketoacyl synthase/acyl transferase; alpha-bet | 99.97 | |
| 4ewg_A | 412 | Beta-ketoacyl synthase; ssgcid, structural genomic | 99.97 | |
| 2vba_A | 406 | 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop | 99.96 | |
| 2qo3_A | 915 | Eryaii erythromycin polyketide synthase modules 3; | 99.95 | |
| 2hg4_A | 917 | DEBS, 6-deoxyerythronolide B synthase; ketosynthas | 99.95 | |
| 1zow_A | 313 | 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB | 99.95 | |
| 2ebd_A | 309 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.94 | |
| 1ub7_A | 322 | 3-oxoacyl-[acyl-carrier protein] synthase; fatty a | 99.94 | |
| 1u6e_A | 335 | 3-oxoacyl-[acyl-carrier-protein] synthase III; tra | 99.94 | |
| 4dfe_A | 333 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci | 99.93 | |
| 3hhd_A | 965 | Fatty acid synthase; transferase, multienzyme, meg | 99.93 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 99.93 | |
| 1hnj_A | 317 | Beta-ketoacyl-acyl carrier protein synthase III; F | 99.92 | |
| 3il3_A | 323 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.92 | |
| 1mzj_A | 339 | Beta-ketoacylsynthase III; beta-ketosynthase, arom | 99.92 | |
| 2x3e_A | 331 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, | 99.91 | |
| 4efi_A | 354 | 3-oxoacyl-(acyl-carrier protein) synthase; structu | 99.91 | |
| 3s21_A | 345 | 3-oxoacyl-[ACP] synthase III; non-decarboxylative | 99.9 | |
| 1u0m_A | 382 | Putative polyketide synthase; type III polyketide | 99.9 | |
| 3gwa_A | 365 | 3-oxoacyl-(acyl-carrier-protein) synthase III; str | 99.9 | |
| 2h84_A | 374 | Steely1; thiolase-fold, type III polyketide syntha | 99.9 | |
| 3h78_A | 359 | PQS biosynthetic enzyme; PQSD, anthranilic acid, a | 99.9 | |
| 1ted_A | 393 | PKS18; thiolase fold, substrate binding tunnel, tr | 99.89 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 99.88 | |
| 4ewp_A | 350 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans | 99.88 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 99.87 | |
| 3s3l_A | 357 | CERJ; acyltransferase, FABH homologue, KS III homo | 99.87 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 99.87 | |
| 3led_A | 392 | 3-oxoacyl-acyl carrier protein synthase III; struc | 99.87 | |
| 3tsy_A | 979 | Fusion protein 4-coumarate--COA ligase 1, resvera | 99.86 | |
| 3il6_A | 321 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.85 | |
| 2d3m_A | 406 | Pentaketide chromone synthase; chalcone synthase, | 99.85 | |
| 3oit_A | 387 | OS07G0271500 protein; type III polyketide synthase | 99.83 | |
| 3ov2_A | 393 | Curcumin synthase; type III polyketide synthase, t | 99.83 | |
| 3euo_A | 379 | Type III pentaketide synthase; alpha helix, acyltr | 99.82 | |
| 3v7i_A | 413 | Putative polyketide synthase; type III polyketide | 99.82 | |
| 3a5r_A | 387 | Benzalacetone synthase; chalcone synthase, type II | 99.82 | |
| 3awk_A | 402 | Chalcone synthase-like polyketide synthase; type I | 99.82 | |
| 1i88_A | 389 | CHS2, chalcone synthase 2; polyketide synthase, tr | 99.82 | |
| 2p0u_A | 413 | Stilbenecarboxylate synthase 2; polyketide synthas | 99.82 | |
| 1ee0_A | 402 | 2-pyrone synthase; polyketide synthase, thiolase f | 99.82 | |
| 1xes_A | 413 | Dihydropinosylvin synthase; native structure, tran | 99.81 | |
| 3e1h_A | 465 | PKSIIINC, putative uncharacterized protein; resorc | 99.81 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 99.81 | |
| 3lma_A | 347 | Stage V sporulation protein AD (spovad); NESG, str | 99.81 | |
| 1xpm_A | 396 | 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s | 99.81 | |
| 2f82_A | 450 | HMG-COA synthase; HMGS1, transferase; 2.10A {Brass | 99.78 | |
| 2v4w_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 99.78 | |
| 3v4n_A | 388 | HMG-COA synthase; hydroxymethylglutaryl-COA syntha | 99.74 | |
| 3sqz_A | 425 | Putative hydroxymethylglutaryl-COA synthase; thiol | 99.74 | |
| 2p8u_A | 478 | Hydroxymethylglutaryl-COA synthase, cytoplasmic; h | 99.68 | |
| 2wya_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 99.48 | |
| 4ewp_A | 350 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans | 92.48 | |
| 3lma_A | 347 | Stage V sporulation protein AD (spovad); NESG, str | 91.32 | |
| 3euo_A | 379 | Type III pentaketide synthase; alpha helix, acyltr | 88.53 | |
| 3e1h_A | 465 | PKSIIINC, putative uncharacterized protein; resorc | 87.08 | |
| 3s21_A | 345 | 3-oxoacyl-[ACP] synthase III; non-decarboxylative | 85.71 | |
| 3h78_A | 359 | PQS biosynthetic enzyme; PQSD, anthranilic acid, a | 84.83 | |
| 3gwa_A | 365 | 3-oxoacyl-(acyl-carrier-protein) synthase III; str | 83.65 | |
| 1zow_A | 313 | 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB | 83.52 | |
| 2x3e_A | 331 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, | 82.79 | |
| 3v7i_A | 413 | Putative polyketide synthase; type III polyketide | 82.51 | |
| 3ov2_A | 393 | Curcumin synthase; type III polyketide synthase, t | 82.49 | |
| 3il6_A | 321 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 82.39 | |
| 1u6e_A | 335 | 3-oxoacyl-[acyl-carrier-protein] synthase III; tra | 82.36 | |
| 1mzj_A | 339 | Beta-ketoacylsynthase III; beta-ketosynthase, arom | 82.0 | |
| 3awk_A | 402 | Chalcone synthase-like polyketide synthase; type I | 81.59 | |
| 1i88_A | 389 | CHS2, chalcone synthase 2; polyketide synthase, tr | 81.42 | |
| 3led_A | 392 | 3-oxoacyl-acyl carrier protein synthase III; struc | 80.87 | |
| 3a5r_A | 387 | Benzalacetone synthase; chalcone synthase, type II | 80.84 | |
| 2p0u_A | 413 | Stilbenecarboxylate synthase 2; polyketide synthas | 80.74 | |
| 1ee0_A | 402 | 2-pyrone synthase; polyketide synthase, thiolase f | 80.71 | |
| 1hnj_A | 317 | Beta-ketoacyl-acyl carrier protein synthase III; F | 80.41 | |
| 3oit_A | 387 | OS07G0271500 protein; type III polyketide synthase | 80.34 | |
| 1u0m_A | 382 | Putative polyketide synthase; type III polyketide | 80.33 | |
| 4e1l_A | 395 | Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, | 80.24 |
| >2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-78 Score=629.64 Aligned_cols=426 Identities=89% Similarity=1.338 Sum_probs=358.8
Q ss_pred cCcchhhcccCCCCCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccH
Q 012506 36 AGDSAAYHRTSVYGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASE 115 (462)
Q Consensus 36 ~~~~~~~~~~~~~~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~ 115 (462)
.+++..+.+..++|++|||||++||||++..+|.+++.++.+|+.+|+++||+++|+++++||.+++|+..++...+++.
T Consensus 16 ~~~~~~~~~~~~~m~~v~Ivg~~rT~~g~~~~g~~~~~~~~~La~~Aa~~AL~dAGl~~~~Id~vi~g~~~~~~~~~~~~ 95 (442)
T 2wu9_A 16 AGDSAAYQRTSLYGDDVVIVAAHRTPLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASE 95 (442)
T ss_dssp ----------CCGGGCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCCEEEECCSSBHHHHHHH
T ss_pred cCCcccCCcchhcCCCeEEEEcCcCCeeecCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCccCCCChH
Confidence 35555666666777899999999999998435889999999999999999999999999999999999987643224678
Q ss_pred HHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhccccc
Q 012506 116 CRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLP 195 (462)
Q Consensus 116 a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (462)
++.++..+|+|.++|+++|+++|+|+++||..|+++|++|++|++|++|+|+|+..|+.......+.+........+...
T Consensus 96 a~~va~~lGl~~~~p~~~v~~aCaSg~~Al~~A~~~I~sG~~d~vLvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~ 175 (442)
T 2wu9_A 96 CRMAAFYAGFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWEGSVNPAVKKFAQAQNCLLP 175 (442)
T ss_dssp HHHHHHHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCCCCCSCCCGGGGGCHHHHHTTSC
T ss_pred HHHHHHHcCCCCCceEEEeCCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccccchhhhhccccccchhH
Confidence 89999999997779999999999999999999999999999999999999999987653221111111110001122357
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhc
Q 012506 196 MGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAK 275 (462)
Q Consensus 196 ~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~ 275 (462)
|++++++|+++||+|||+||+|+++||++|.+|+++|+|++||+|++++.++++.+.....++++||++|+++|+|+|.+
T Consensus 176 mg~~A~~~~~~~gisre~~~~~A~~s~~~A~~~p~ag~~~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~t~e~~~~ 255 (442)
T 2wu9_A 176 MGVTSENVAQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGK 255 (442)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEECTTTCCEEEEEECSCTTCCTTCCHHHHHT
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhChhcccccccccceeeccccccccccCceeeecccCcCCCCCHHHHhc
Confidence 99999999999999999999999999999999999999999999998754333222122357899999999999999999
Q ss_pred CCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCc
Q 012506 276 LKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDI 355 (462)
Q Consensus 276 ~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DI 355 (462)
+||+|+++|++|.+|||+++|||+++||++++.|+++|.+|+++|+|++..+.+|+.++.++..+++++|+++||+++||
T Consensus 256 ~rpvfd~~G~vt~~n~s~~~DGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~DI 335 (442)
T 2wu9_A 256 LKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPVLGVFRTFAAVGVDPAIMGIGPAVAIPAAVKAAGLELDDI 335 (442)
T ss_dssp SCCSSCTTCCCCGGGBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHTTCCGGGC
T ss_pred CCCccCCCCCeechhcCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEecCCchhcchHHHHHHHHHHHHcCCCHHHC
Confidence 99999999999999999999999999999999999999999999999999999898888899999999999999999999
Q ss_pred cEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEE
Q 012506 356 DLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAV 435 (462)
Q Consensus 356 D~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v 435 (462)
|+||+||+|+++++.++|.||++++|+|++||++++|||+||||+++++++++||+++.++.++||+++|+|||++.|+|
T Consensus 336 d~iE~h~aft~~~l~~~~~lG~~~~~vN~~GG~~a~GHp~GAsG~~~~~~~v~~Lr~~~~~~~~glas~~~GGG~~~a~v 415 (442)
T 2wu9_A 336 DLFEINEAFASQFVYCRNKLGLDPEKINVNGGAMAIGHPLGATGARCVATLLHEMKRRGKDCRFGVVSMCIGTGMGAAAV 415 (442)
T ss_dssp CEEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEEETTTEEEEEE
T ss_pred CEEEEeCCChHHHHHHHHHhCCCCCCcCCCccHhhcCCchhHHHHHHHHHHHHHHhccCCCCCEEEEEeecccchheEEE
Confidence 99999999999999999999999999999999999999999999999999999999997223999999999999999999
Q ss_pred EEeccccccccccccccccccccccC
Q 012506 436 FERGDCADELCNVRKVESNNFLSKDV 461 (462)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (462)
|++.++.+.+.+.++++...+||||.
T Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (442)
T 2wu9_A 416 FERGDGVDELRNARKVEAQGLLSKDA 441 (442)
T ss_dssp EEECSHHHHHHTC-------------
T ss_pred EEeccccccCCCccchhhcccccccC
Confidence 99999999999999999999999984
|
| >2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-74 Score=600.37 Aligned_cols=387 Identities=59% Similarity=0.968 Sum_probs=349.3
Q ss_pred CCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCC
Q 012506 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (462)
Q Consensus 49 ~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~ 128 (462)
+++|+|+|++||||++.++|.+++.++.+|+.+|+++||+++|+++++||.+++|+..++.. +++.++.++..+|+|.+
T Consensus 29 ~~~v~Ivg~~rt~~g~~~~~~~~~~~~~~L~~~Aa~~AL~dAgl~~~~id~v~~g~~~~~~~-~~~~a~~~a~~lGl~~~ 107 (418)
T 2iik_A 29 AADVVVVHGRRTAICRAGRGGFKDTTPDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPGA-GAIMARIAQFLSDIPET 107 (418)
T ss_dssp TTCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCCEEEECSSSBGG-GHHHHHHHHHHTTCCTT
T ss_pred CCCeEEEeeeecCceecCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCccc-cccHHHHHHHHcCCCCC
Confidence 57899999999999986567889999999999999999999999999999999999877654 56788999999999778
Q ss_pred cceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhC
Q 012506 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFG 208 (462)
Q Consensus 129 ~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g 208 (462)
+|+++|+++|+|+++||..|+++|++|++|++|++|+|.|++.|+.+...+.+.+.+.....+++.+|++++++++++||
T Consensus 108 ~p~~~v~~aCss~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~a~~~g 187 (418)
T 2iik_A 108 VPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSLADRGNPGNITSRLMEKEKARDCLIPMGITSENVAERFG 187 (418)
T ss_dssp SCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTCC-----CCCTTGGGCHHHHGGGSCHHHHHHHHHHHTT
T ss_pred ceEEEeCCCCHHHHHHHHHHHHHHHCCCCCEEEEeccccCccCCccCCcccchhhhcccccccccccHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999876543222222232222233455789999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCccc
Q 012506 209 VTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTA 288 (462)
Q Consensus 209 isre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~ 288 (462)
+|||+||+|+++||++|.+|++.|+|++||+|++++.++|+ +.++++++++|+.+|+.+|+|+|.++||+|+++|++|.
T Consensus 188 itre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~-~~~~~~~~~~d~~~rp~~t~e~l~~~~~vfd~~~~~t~ 266 (418)
T 2iik_A 188 ISREKQDTFALASQQKAARAQSKGCFQAEIVPVTTTVHDDK-GTKRSITVTQDEGIRPSTTMEGLAKLKPAFKKDGSTTA 266 (418)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEEEECTT-SCEEEEEECSCTTCCTTCCHHHHHHCCCSSSTTCCCCS
T ss_pred CCHHHHHHHHHHHHHHHHhChhcCccccceeeeeecccccc-CcccceeeecccCcCCCCCHHHHhhCCCcccCCCceee
Confidence 99999999999999999999999999999999987654443 22234678999999999999999999999999899999
Q ss_pred CCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCCHHHH
Q 012506 289 GNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQF 368 (462)
Q Consensus 289 ~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~ 368 (462)
+|+++++|||+++||++++.|+++|.+|+++|++++..+.+|+.++.++..+++++|+++||+++|||+||+||+|+++.
T Consensus 267 ~d~~~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~vE~h~af~~~~ 346 (418)
T 2iik_A 267 GNSSQVSDGAAAILLARRSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAYAIPVALQKAGLTVSDVDIFEINEAFASQA 346 (418)
T ss_dssp TTBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHHTCCGGGEEEEEECCSBHHHH
T ss_pred ccccCCCCCceEEEEecHHHHHhcCCCceEEEEEEEeccCCchhcchhHHHHHHHHHHHcCCCHHHCCeeeeeccchHHH
Confidence 99999999999999999999999999999999999999999988888999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCc-EEEEEeecccceeEEEEEEec
Q 012506 369 VYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCR-FGVISMCIGTGMGAAAVFERG 439 (462)
Q Consensus 369 ~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~-~gl~~~~~G~G~g~A~v~~~~ 439 (462)
+.++|.||++++|||++||++++|||+||||+++++++++||+++++ + +||+++|+|||+|.|+|||+.
T Consensus 347 ~~~~~~lg~~~~~vN~~GG~~a~GHp~GAsG~~~~~~~~~~L~~~~~--~~~gl~~~c~ggG~g~a~~~e~~ 416 (418)
T 2iik_A 347 AYCVEKLRLPPEKVNPLGGAVALGHPLGCTGARQVITLLNELKRRGK--RAYGVVSMCIGTGMGAAAVFEYP 416 (418)
T ss_dssp HHHHHHHTCCGGGBCTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHTS--CEEEEEEEEETTTEEEEEEEEEC
T ss_pred HHHHHHcCCCccccCCCCCeeeecCChhhhHHHHHHHHHHHHHhcCC--CeeeEEEEeeccchhheEEEecc
Confidence 99999999999999999999999999999999999999999999987 7 999999999999999999986
|
| >3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-74 Score=591.88 Aligned_cols=381 Identities=43% Similarity=0.635 Sum_probs=346.1
Q ss_pred CCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHc-CCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCC
Q 012506 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKT-NVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE 127 (462)
Q Consensus 49 ~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~a-gl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~ 127 (462)
|++|+|||++||||+|..+|.+++.++.+|+.+|+++||+++ |+++++||.+++|++.+++.++++.++.++..+|+|.
T Consensus 1 m~~v~Ivg~~rT~~g~~~~g~~~~~~~~~L~~~a~~~Al~~a~gi~~~~Id~v~~g~~~~~~~~~~~~a~~~~~~~Gl~~ 80 (387)
T 3goa_A 1 MEQVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPSLTAATLDDIYWGCVQQTLEQGFNIARNAALLAEIPH 80 (387)
T ss_dssp CCCEEEEEEEECCCEETTTCTTTTSCHHHHHHHHHHHHHHHCTTSCGGGCCEEEEECSCCSBTTTTTHHHHHHHHTTCCT
T ss_pred CCcEEEEEcccCCceeCCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHcCEEEEEcccCCcccccHHHHHHHHHcCCCC
Confidence 468999999999999854489999999999999999999999 9999999999999998876546789999999999987
Q ss_pred CcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHh
Q 012506 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRF 207 (462)
Q Consensus 128 ~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~ 207 (462)
.+|+++|+++|+|+++||++|+++|++|++|++|++|+|+||+.|+.....+.+.+...++.. ...||+++++|+++|
T Consensus 81 ~~p~~~v~~aCss~l~Al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~--~~~~g~~a~~~~~~~ 158 (387)
T 3goa_A 81 SVPAVTVNRLCGSSMQALHDAARMIMTGDAQVCLVGGVEHMGHVPMSHGVDFHPGLSRNVAKA--AGMMGLTAEMLSRLH 158 (387)
T ss_dssp TSCCEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECTTTSCTTTTBCCCTTCC---------CCCHHHHHHHHHHT
T ss_pred CCcEeEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEecCCCCccccccCcCcccccccccc--cccHHHHHHHHHHHh
Confidence 899999999999999999999999999999999999999999887643222323222222222 467999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC-CCCc
Q 012506 208 GVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK-DGTT 286 (462)
Q Consensus 208 gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p-~g~~ 286 (462)
|++||+|++|+++||++|.+|+++|+|++||+|++++.+. .++.+++.|+.+|+++|+|+|.++||+|+| +|++
T Consensus 159 g~tre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~~-----~~~~~~~~d~~~r~~~t~e~l~~~~p~f~~~~g~~ 233 (387)
T 3goa_A 159 GISREMQDQFAARSHARAWAATQSGAFKTEIIPTGGHDAD-----GVLKQFNYDEVIRPETTVEALSTLRPAFDPVSGTV 233 (387)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECTT-----SCEEEECSCTTCCTTCCHHHHTTSCCSSCTTTCCC
T ss_pred CCCHHHHHHHHHHHHHHHHHhHhcCCcccceeeeeecccc-----CcccccccccccCCCCCHHHHhcCCCcccCCCCce
Confidence 9999999999999999999999999999999999875321 123578999999999999999999999999 9999
Q ss_pred ccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCCHH
Q 012506 287 TAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFAS 366 (462)
Q Consensus 287 t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~ 366 (462)
|.+|+|+++||++++||++++.|++++.+|+++|+|++..+..|+.++.++..+++++|+++||+++|||+||+||+|++
T Consensus 234 t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~ve~h~~f~~ 313 (387)
T 3goa_A 234 TAGTSSALSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIDVFEMNEAFAA 313 (387)
T ss_dssp CGGGBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCTTSTTCTHHHHHHHHHHHHTCCGGGCSEEEECCSBHH
T ss_pred ecccCCCcCccEEEEEEecHHHHHHcCCCccEEEEEEEEcCCCCCcchHHHHHHHHHHHHHcCCCHHHcCEEEEeCcchH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCC---CCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEe
Q 012506 367 QFVYCRNKLGLD---PEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 367 ~~~~~~e~LGl~---~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
+++.+.|.||+| ..|+|++||++++|||+||||+++++++++||+++++ ++||+++|+|||+|.|+|||+
T Consensus 314 ~~~~~~~~lg~~~~~~~~vn~~gg~~~~GH~~gasG~~~~~~~~~~L~~~~~--~~gl~~~c~ggG~g~a~~~e~ 386 (387)
T 3goa_A 314 QILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINLMERKDA--QFGLATMCIGLGQGIATVFER 386 (387)
T ss_dssp HHHHHHHHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHTTC--SEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHHHHHhCCCcCCCccCCCCCchhcccCCHHHHHHHHHHHHHHHHHhcCC--CEEEEEeccCcCceEEEEEEe
Confidence 999999999994 4589999999999999999999999999999999877 999999999999999999986
|
| >3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-73 Score=590.19 Aligned_cols=377 Identities=37% Similarity=0.613 Sum_probs=322.4
Q ss_pred CCCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHH-cCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCC
Q 012506 48 YGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEK-TNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFP 126 (462)
Q Consensus 48 ~~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~-agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp 126 (462)
++++|+|||++||||+|.++|.+++.++.+|+.+|+++||++ +|+++++||.+++|++.+...+++++++.++..+|+|
T Consensus 5 m~~~v~Ivg~~rTp~gr~~~g~l~~~~~~~L~~~A~~~AL~~~AGl~~~dId~vi~g~~~~~~~~~~~~a~~va~~lGlp 84 (407)
T 3svk_A 5 MSEEAFIYEAIRTPRGKQKNGSLTEVKPLNLVVGLVDELRRRYPDLDETLISDMILGVVSPVGDQGGDIARTAVLAAGLP 84 (407)
T ss_dssp --CCEEEEEEEECCCEETTTSTTTTSCHHHHHHHHHHHHHHHSTTCCGGGEEEEEEECC--------CHHHHHHHHTTCC
T ss_pred CCCCeEEEecccCCceecCCCCCCCCCHHHHHHHHHHHHHhhhcCcCHHHCCEEEEEecCccccccCcHHHHHHHHcCCC
Confidence 457899999999999976779999999999999999999999 9999999999999998876544678999999999998
Q ss_pred CCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCC---CCChhhhhhhhhhcccccHHHHHHHH
Q 012506 127 ETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEG---SVNPKVKAFEQAQNCLLPMGVTSENV 203 (462)
Q Consensus 127 ~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~~a~~~ 203 (462)
.++|+++|+++|+|++++|..|+++|++|++|++|++|+|+||+.|+.... ..++. +.......+||++++++
T Consensus 85 ~~~pa~~v~~~Css~~~Al~~A~~~I~sG~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~----~~~~~~~~~~g~~Ae~~ 160 (407)
T 3svk_A 85 ETTGGVQLNRFCASGLEAVNTAAQKVRSGWDDLVLAGGVESMSRVPMGSDGGAWATDPE----TNYRIGFVPQGIGADLI 160 (407)
T ss_dssp TTCEEEEEC---CBSCCHHHHHHHHHHHTSCCEEEEEEEECC-----------CCCCTT----TCCCCCCHHHHHHHHHH
T ss_pred CCCceEEecCcChhHHHHHHHHHHHHHcCCCCEEEEEEEcccccCcccccccccccCch----hhccccccCHHHHHHHH
Confidence 889999999999999999999999999999999999999999987653321 11111 11223446899999999
Q ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCC
Q 012506 204 AHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKD 283 (462)
Q Consensus 204 ~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~ 283 (462)
+++|+++||+||+|++.||++|..|+++|+|++||+|++ +|+. ..++++|+.+|+++|+|++.++||+|+|+
T Consensus 161 a~~~~i~re~~d~~a~~s~~~A~~A~~~g~~~~ei~pv~----~~~g----~~~~~pd~~~r~~~t~e~l~~~~~vf~~~ 232 (407)
T 3svk_A 161 ATLEGFSREDVDAYALRSQQKAAAAWSGGYFAKSVVPVR----DQNG----LVILDHDEHMRPDTTMEGLAKLKTAFDGV 232 (407)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEE----CTTS----CEEECSCTTCCTTCCHHHHHTSCBSCC--
T ss_pred HHHhCcCHHHHHHHHHHHHHHHHHHHHcCCcccceeeee----cCCC----ceeeCCccccCCCCCHHHHhhCCCeecCC
Confidence 999999999999999999999999999999999999996 3332 24688999999999999999999999987
Q ss_pred CCc---------------------ccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHH
Q 012506 284 GTT---------------------TAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIP 342 (462)
Q Consensus 284 g~~---------------------t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~ 342 (462)
|.+ |.+|||+++|||+++||++++.|++++.+|+++|.+++..+.+|..++.++..+++
T Consensus 233 g~v~~~~~~~~~~~~~~~~i~~~~t~~~~s~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~ 312 (407)
T 3svk_A 233 GEMGGFDDVALQKYHWVEKINHVHTGGNSSGIVDGAALVLVGSEKAGKSQGLTPRARIVATATSGSDPVIMLTGPTPATR 312 (407)
T ss_dssp -----------CTTTTCSSCCCCCBTTTBCCBEEEEEEEEEECHHHHHHTTCCCCEEEEEEEEC------CCCTHHHHHH
T ss_pred CccccccccccccccccccccccccccccCcccCceeEEEEeeHHHHHHcCCCCcEEEEEEEEeccCCccccHHHHHHHH
Confidence 754 99999999999999999999999999999999999999999999989999999999
Q ss_pred HHHHHcCCCCCCccEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEE
Q 012506 343 AAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVI 422 (462)
Q Consensus 343 ~aL~~AGl~~~DID~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~ 422 (462)
++|+++||+++|||+||+||+|+++++.+.|.||++++|||++||++++|||+|+||+++++++++||+++++ ++||+
T Consensus 313 ~al~~Agl~~~dId~~e~hdaf~~~~l~~~~~lg~~~~~vn~~Gg~~~~GHp~gasG~~~~~~~~~~L~~~~~--~~gl~ 390 (407)
T 3svk_A 313 KVLDRAGLTIDDIDLFELNEAFASVVLKFQKDLNIPDEKLNVNGGAIAMGHPLGATGAMITGTMVDELERRNA--RRALI 390 (407)
T ss_dssp HHHHHHTCCGGGCSEEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCBCGGGHHHHHHHHHHHHHHHHTC--CEEEE
T ss_pred HHHHHcCCCHHHCCEEEEeChhHHHHHHHHHHhCCCCCCCCCCCcHhheeCcHHHHHHHHHHHHHHHHHhcCC--CEEEE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999977 99999
Q ss_pred EeecccceeEEEEEEe
Q 012506 423 SMCIGTGMGAAAVFER 438 (462)
Q Consensus 423 ~~~~G~G~g~A~v~~~ 438 (462)
++|+|||+|.|+|||+
T Consensus 391 ~~c~ggG~g~a~~~e~ 406 (407)
T 3svk_A 391 TLCIGGGMGVATIIER 406 (407)
T ss_dssp EEECSSSCEEEEEEEE
T ss_pred EeeccCcceEEEEEEc
Confidence 9999999999999997
|
| >4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-72 Score=581.57 Aligned_cols=380 Identities=39% Similarity=0.609 Sum_probs=345.3
Q ss_pred CCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCC
Q 012506 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (462)
Q Consensus 49 ~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~ 128 (462)
|++|+|||++||||++ ++|.+++.++.+|+.+|+++||+++|+++++||.+++|++.++.. +++.++.++..+|+|.+
T Consensus 6 m~~v~Ivg~~rT~~~~-~~~~~~~~~~~~L~~~A~~~AL~~agl~~~dId~vi~g~~~~~~~-~~~~a~~v~~~lGl~~~ 83 (396)
T 4dd5_A 6 MREVVIASAARTAVGS-FGGAFKSVSAVELGVTAAKEAIKRANITPDMIDESLLGGVLTAGL-GQNIARQIALGAGIPVE 83 (396)
T ss_dssp CCCEEEEEEEECCCEE-TTSTTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECSCCTTS-CSCHHHHHHHHTTCCTT
T ss_pred CCcEEEEEcccCCeee-cCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCCCC-CchHHHHHHHHcCCCCC
Confidence 5789999999999998 568889999999999999999999999999999999999988765 78899999999999878
Q ss_pred cceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCC-----CCCC-hhhhh-----hhhhhcccccHH
Q 012506 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWE-----GSVN-PKVKA-----FEQAQNCLLPMG 197 (462)
Q Consensus 129 ~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~-----~~~~-~~~~~-----~~~~~~~~~~~g 197 (462)
+|+++|+++|+|++++|..|+++|++|++|++||+|+|+||+.|+... ..+. ..+.+ ..........|+
T Consensus 84 ~p~~~v~~aCss~~~al~~A~~~I~~G~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (396)
T 4dd5_A 84 KPAMTINIVCGSGLRSVSMASQLIALGDADIMLVGGAENMSMSPYLVPSARYGARMGDAAFVDSMIKDGLSDIFNNYHMG 163 (396)
T ss_dssp SCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEESTTCCEECTTTTTCCCSSCCCCEEHHHHHTSEETTTTEEHH
T ss_pred ceEEEeccccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccCCcccccccccccccCcccccchhhhcccccccccchHH
Confidence 999999999999999999999999999999999999999998776431 1110 11111 000111235799
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCC
Q 012506 198 VTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLK 277 (462)
Q Consensus 198 ~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~ 277 (462)
+++++|+++||++||+||+|+++||++|.+|+++|+|++||+||+++.++ .+.++++|+.+|+++|+|+|.+++
T Consensus 164 ~~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~f~~ei~pv~~~~~~------~~~~~~~d~~~r~~~t~e~l~~~~ 237 (396)
T 4dd5_A 164 ITAENIAEQWNITREEQDELALASQNKAEKAQAEGKFDEEIVPVVIKGRK------GDTVVDKDEYIKPGTTMEKLAKLR 237 (396)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEC----------CEEECSCSCCCTTCCHHHHHHCC
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCcccceeeeeeccCC------CceeecCcccccCCCCHHHHhhCC
Confidence 99999999999999999999999999999999999999999999875321 135789999999999999999999
Q ss_pred CcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccE
Q 012506 278 PVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDL 357 (462)
Q Consensus 278 p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~ 357 (462)
|+|+|+|++|.+|||+++||++++||++++.|++++.+|+++|.+++..+..|..++.++..+++++|+++||+++|||+
T Consensus 238 ~v~~p~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~ 317 (396)
T 4dd5_A 238 PAFKKDGTVTAGNASGINDGAAMLVVMAKEKAEELGIEPLATIVSYGTAGVDPKIMGYGPVPATKKALEAANMTIEDIDL 317 (396)
T ss_dssp BSSSTTCSCBTTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCSE
T ss_pred CccCCCCCeecCCCCCcCcceeEEEEeeHHHHHHCCCCceEEEEEEEEecCCCCcccHHHHHHHHHHHHHcCCCHHHcCE
Confidence 99999999999999999999999999999999999999999999999998899988889999999999999999999999
Q ss_pred EEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEE
Q 012506 358 FEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 437 (462)
Q Consensus 358 ~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~ 437 (462)
||+||+|++..+.+.|.||+++.|+|++||++++|||+||||+++++++++||+++++ ++||+++|+|||+|.|+|||
T Consensus 318 ve~~d~f~~~~~~~~~~lg~~~~~~n~~gg~~~~GH~~gasG~~~~~~~~~~L~~~~~--~~gl~~~c~ggG~g~a~~~e 395 (396)
T 4dd5_A 318 VEANEAFAAQSVAVIRDLNIDMNKVNVNGGAIAIGHPIGCSGARILTTLLYEMKRRDA--KTGLATLCIGGGMGTTLIVK 395 (396)
T ss_dssp EEECCSBHHHHHHHHHHHTCCTTSBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHTC--SEEEEEEEETTTEEEEEEEE
T ss_pred EEecChHHHHHHHHHHHhCCCCCccCCCCchhhccCcHHHHHHHHHHHHHHHHHhcCC--CeEEEEEcccCCceeEEEEe
Confidence 9999999999999999999999999999999999999999999999999999999987 99999999999999999998
Q ss_pred e
Q 012506 438 R 438 (462)
Q Consensus 438 ~ 438 (462)
+
T Consensus 396 ~ 396 (396)
T 4dd5_A 396 R 396 (396)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-72 Score=580.71 Aligned_cols=379 Identities=40% Similarity=0.672 Sum_probs=346.8
Q ss_pred CCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCC
Q 012506 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (462)
Q Consensus 49 ~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~ 128 (462)
|++|+|||++||||+| ++|.+++.++.+|+.+|+++||+++|+++++||.+++|++.+.+. ++++++.++..+|+|.+
T Consensus 4 m~~v~Ivg~~rT~~~~-~~~~~~~~~~~~L~~~A~~~Al~~agl~~~~Id~v~~g~~~~~~~-~~~~a~~i~~~lGl~~~ 81 (394)
T 3ss6_A 4 MHNVVITAAVRSPIGT-FGGALKNVTPVELAVPVLQEAVKRGGVEPHEVDEVILGHCIQRTD-EANTARTAALAAGFPDT 81 (394)
T ss_dssp CCCEEEEEEEECCCEE-TTSTTTTCCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSCCGG-GCSHHHHHHHHTTCCTT
T ss_pred CceEEEEEcccCCccc-cCCCCCCCCHHHHHHHHHHHHHHHcCCCHhHCCEEEEEEccCCCc-cchHHHHHHHHcCCCCC
Confidence 5789999999999998 568889999999999999999999999999999999999988774 78899999999999878
Q ss_pred cceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCC-----CCCCC------hhhhhhhhhhcccccHH
Q 012506 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAW-----EGSVN------PKVKAFEQAQNCLLPMG 197 (462)
Q Consensus 129 ~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~-----~~~~~------~~~~~~~~~~~~~~~~g 197 (462)
+|+++|+++|+|++++|+.|+++|++|++|++|++|+|+||+.|+.. ...+. +.+...++ ......||
T Consensus 82 ~p~~~v~~aCss~~~al~~A~~~I~~G~~~~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g 160 (394)
T 3ss6_A 82 VTGYTIQRQCSSGMQAIMSAAMQIQLGVSEVVVAGGVEAMSSSPYALKQHRWGQRLQHGEIRDTVWEVLED-PIHHIMMG 160 (394)
T ss_dssp CEEEEEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEECTTCCEEESSTTTCCCSSCCCCEEHHHHHTBC-TTTCCBHH
T ss_pred ceEEEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEhhccCCcccccccccccccCCccccccccccccc-ccccchHH
Confidence 99999999999999999999999999999999999999999877632 11111 11111111 12236799
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCC
Q 012506 198 VTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLK 277 (462)
Q Consensus 198 ~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~ 277 (462)
+++++|+++||++||+||+|+++||++|.+|+++|+|++||+|++++.++ .+.++++|+++|+++|+|++.+++
T Consensus 161 ~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~ag~f~~ei~p~~~~~~~------~~~~~~~d~~~R~~~t~e~~~~~~ 234 (394)
T 3ss6_A 161 ETAENLVEQYEITREEQDEVALRSHTLALKAIESGYFDDQIVPITIKERR------KEVVFSKDEHPRADITAEKLAGLK 234 (394)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECSS------CEEEECSCCCCCTTCCHHHHHTCC
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeEeEEeccCC------CceeecccccccCCCCHHHHhhCC
Confidence 99999999999999999999999999999999999999999999875321 234789999999999999999999
Q ss_pred CcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccE
Q 012506 278 PVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDL 357 (462)
Q Consensus 278 p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~ 357 (462)
|+|+|+|++|.+|+|+++||++++||++++.|++++.+|+++|.+++..+.+|..++.++..+++++|+++||+++|||+
T Consensus 235 pvf~~~g~~t~~~~~~~~dGaaavvL~~~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dId~ 314 (394)
T 3ss6_A 235 PAFRKDGSVTAGNASGLNDGSAVLVLMSEEKAKEKGLQPLARIVGYSVAGVDPKIMGIGPAPAIRKGLEKVDWSLEDADL 314 (394)
T ss_dssp BSSSTTCCCBSTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCSE
T ss_pred CccCCCCceecCccCCcccceeEEEeccHHHHHHCCCCceEEEEEEEEecCCCccchHHHHHHHHHHHHHcCCCHHHcCE
Confidence 99999999999999999999999999999999999999999999999999999999889999999999999999999999
Q ss_pred EEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEE
Q 012506 358 FEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 437 (462)
Q Consensus 358 ~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~ 437 (462)
||+||+|++..+.+.|.||++++|+|++||++++|||+||||+++++++++||+++++ ++||+++|+|||+|.|+|||
T Consensus 315 ve~~d~fa~~~~~~~~~lg~~~~~v~~~gg~~~~GH~~gasG~~~~~~~~~~L~~~~~--~~gl~~~c~ggG~g~a~~~e 392 (394)
T 3ss6_A 315 LEINEAFAAQYLAVEKELDLDREKVNVNGSGVGLGHPIGCTGARITVSLIHELKRRGL--EKGIASLCVGGGIGVALFIE 392 (394)
T ss_dssp EEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHTC--CEEEEEEEETTTEEEEEEEE
T ss_pred EEeCCchHHHHHHHHHHhCCCCCCCCCCcchHhhCCcHHHHHHHHHHHHHHHHHhcCC--CEEEEEEccCcCceeEEEEE
Confidence 9999999999999999999999999999999999999999999999999999999977 99999999999999999999
Q ss_pred e
Q 012506 438 R 438 (462)
Q Consensus 438 ~ 438 (462)
+
T Consensus 393 ~ 393 (394)
T 3ss6_A 393 A 393 (394)
T ss_dssp E
T ss_pred c
Confidence 7
|
| >1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-72 Score=582.23 Aligned_cols=381 Identities=50% Similarity=0.779 Sum_probs=339.4
Q ss_pred cCCCCCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcC----CCccccCcEEEEeccCCCCccccHHHHHH
Q 012506 45 TSVYGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTN----VDPSEVGDIVVGTVLAPGSQRASECRMAA 120 (462)
Q Consensus 45 ~~~~~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~ag----l~~~~Id~vivG~~~~~~~~~~~~a~~~a 120 (462)
|.++|++|||||++||||+|..+|.+++.++.+|+.+|+++||+++| +++++||.+++|+..++.. +++.++.++
T Consensus 5 ~~~~m~~v~Ivg~~rT~~g~~~~g~~~~~~~~~La~~Aa~~Al~~Ag~~~~l~~~~id~v~~g~~~~~~~-~~~~a~~va 83 (393)
T 1afw_A 5 LEKRPEDVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGA-GATEHRAAC 83 (393)
T ss_dssp TSCCTTCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGG-GHHHHHHHH
T ss_pred hhhcCCCEEEEEcCcCCceeCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHCCEEEEEecCCCCC-CChHHHHHH
Confidence 34456899999999999998435899999999999999999999999 9999999999999877654 677899999
Q ss_pred HHcCCCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCC---CChhhhhhhhhhcccccHH
Q 012506 121 FYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGS---VNPKVKAFEQAQNCLLPMG 197 (462)
Q Consensus 121 ~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~---~~~~~~~~~~~~~~~~~~g 197 (462)
..+|+|.++|+++|+++|+|+++||..|+++|++|++|++|++|+|+|+..|+..... ..+.+........++..|+
T Consensus 84 ~~lGl~~~~p~~~v~~aCasg~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 163 (393)
T 1afw_A 84 LASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNNYKNVNPLGMISSEELQKNREAKKCLIPMG 163 (393)
T ss_dssp HHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHHHHGGGSCTTCSCCCHHHHHCTTGGGGGSCHH
T ss_pred HHcCCCCCceEEEEcCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEEecCCCcccccccccccchhhhhcccccccchhHH
Confidence 9999976799999999999999999999999999999999999999998755422111 1111110000112235799
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCC
Q 012506 198 VTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLK 277 (462)
Q Consensus 198 ~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~ 277 (462)
..+++|+++||++||+||+|+++||++|.+|+++|+|++||+|++++. + . ++++|+.+|+++|+|+|.++|
T Consensus 164 ~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~f~~ei~P~~~~~-----~---~-~~~~d~~~r~~~t~e~~~~~r 234 (393)
T 1afw_A 164 ITNENVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLPD-----G---S-ICQSDEGPRPNVTAESLSSIR 234 (393)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTSSTTTBCCEECTT-----S---C-EECSCSSCCSCCCHHHHHHCC
T ss_pred HHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCccceeeeeeccC-----C---c-eeccccccCCCCCHHHHhcCC
Confidence 999999999999999999999999999999999999999999997631 1 2 689999999999999999999
Q ss_pred CcccCC-CCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCcc
Q 012506 278 PVFKKD-GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDID 356 (462)
Q Consensus 278 p~f~p~-g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID 356 (462)
|+|+++ |++|.+|||+++|||+++||+++++|+++|.+|+++|+|++..+.+|+.++.++..+++++|+++||+++|||
T Consensus 235 pvf~~~~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId 314 (393)
T 1afw_A 235 PAFIKDRGTTTAGNASQVSDGVAGVLLARRSVANQLNLPVLGRYIDFQTVGVPPEIMGVGPAYAIPKVLEATGLQVQDID 314 (393)
T ss_dssp BSCC---CCCBTTTBCCBEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHHTCCGGGCS
T ss_pred CcccCCCCCeechhcCcccchhheeeEecHHHHHHcCCCccEEEEEEEEeccChhhcchhHHHHHHHHHHHcCCCHHHCC
Confidence 999888 9999999999999999999999999999999999999999999988888888999999999999999999999
Q ss_pred EEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEE
Q 012506 357 LFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVF 436 (462)
Q Consensus 357 ~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~ 436 (462)
+||+||+|+++++.++|.||++++|+|++||++++|||+||||+++++++++||+++++ ||+++|+|||+|.|++|
T Consensus 315 ~ve~h~~ft~~~l~~~~~lg~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~~~----gl~~~c~ggg~g~a~~~ 390 (393)
T 1afw_A 315 IFEINEAFAAQALYCIHKLGIDLNKVNPRGGAIALGHPLGCTGARQVATILRELKKDQI----GVVSMCIGTGMGAAAIF 390 (393)
T ss_dssp EEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCBCTTTHHHHHHHHHHHHSCTTCE----EEEEEEETTTEEEEEEE
T ss_pred EEEEeccCHHHHHHHHHHhCCCCcCcCCCCChhhcCCchhhHHHHHHHHHHHHHhhcCC----cEEEEeecccceEEEEE
Confidence 99999999999999999999999999999999999999999999999999999998743 99999999999999999
Q ss_pred Eec
Q 012506 437 ERG 439 (462)
Q Consensus 437 ~~~ 439 (462)
+++
T Consensus 391 ~~~ 393 (393)
T 1afw_A 391 IKE 393 (393)
T ss_dssp EEC
T ss_pred EeC
Confidence 973
|
| >1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-72 Score=578.52 Aligned_cols=381 Identities=43% Similarity=0.647 Sum_probs=340.6
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
++|||||++||||+| ++|.+++.++.+|+.+|+++||+++|+++++||.+++|+..++..++++.++.++..+|+|.++
T Consensus 2 ~~v~Ivg~~rT~~~~-~~g~~~~~~~~~L~~~Aa~~Al~dAgl~~~~id~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~ 80 (401)
T 1ulq_A 2 PEAWIVEAVRTPIGK-HGGALASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEV 80 (401)
T ss_dssp -CEEEEEEEECCCEE-TTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTCCTTC
T ss_pred CceEEEEcccCCccc-cCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCChHHHHHHHHhCCCCCc
Confidence 579999999999998 5688899999999999999999999999999999999998776543578899999999997679
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCC-----CCCCC-hhhhhh------hhhh--c--cc
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAW-----EGSVN-PKVKAF------EQAQ--N--CL 193 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~-----~~~~~-~~~~~~------~~~~--~--~~ 193 (462)
|+++|+++|+|+++||..|+++|++|++|++|++|+|+|+..|+.. ...+. ..+.+. +... + ..
T Consensus 81 p~~~v~~aCas~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~ 160 (401)
T 1ulq_A 81 AGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGT 160 (401)
T ss_dssp EEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESSSCCEEECCCCSSSCCSCEEEEETTSSCCSCCHHHHHHSCC
T ss_pred cEeeccccchHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCcccccccccccccCcccccchhhhcccccccccccccc
Confidence 9999999999999999999999999999999999999999866521 11111 111010 0000 1 12
Q ss_pred ccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHH
Q 012506 194 LPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSEL 273 (462)
Q Consensus 194 ~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l 273 (462)
.+|++++++|+++||+|||+||+|+++||++|.+|+++|+|++||+|+++..+ . .++++++|+++|+++|+|+|
T Consensus 161 ~~~~~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~P~~~~~~---~---~~~~~~~d~~~r~~~t~e~~ 234 (401)
T 1ulq_A 161 ESMGETAENLAEMYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRG---K---EEILVEQDEGPRRDTSLEKL 234 (401)
T ss_dssp CCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEET---T---EEEEECSCSCCCTTCCHHHH
T ss_pred chHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeceeecCC---C---CceeeccccccCCCCCHHHH
Confidence 45899999999999999999999999999999999999999999999976422 1 12578999999999999999
Q ss_pred hcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCC
Q 012506 274 AKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLD 353 (462)
Q Consensus 274 ~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~ 353 (462)
.++||+|+++|++|.+|||+++|||+++||+++++|+++|.+|+++|+|++..+.+|+.++.++..+++++|+++||+++
T Consensus 235 ~~~rpif~~~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~ 314 (401)
T 1ulq_A 235 AALRPVFREGGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGLRPLARVRAIAVAGVPPRIMGIGPVPATRKALERAGLSFS 314 (401)
T ss_dssp HHSCBSSSTTCSCBGGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHTTCCGG
T ss_pred hhCCCccCCCCCeechhcCCccchheEEEEecHHHHHHcCCCceEEEEEEEEecCCccccchhHHHHHHHHHHHcCCCHH
Confidence 99999999999999999999999999999999999999999999999999999989988889999999999999999999
Q ss_pred CccEEEecCCCHHHHHHHHHHcCCC--CCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeeccccee
Q 012506 354 DIDLFEINEAFASQFVYCRNKLGLD--PEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMG 431 (462)
Q Consensus 354 DID~~eihdafa~~~~~~~e~LGl~--~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g 431 (462)
|||+||+||+|+++++.++|.||++ ..|+|++||++++|||+||||+++++++++||++++. +++|+++|+|||++
T Consensus 315 dId~ie~heafa~~~l~~~~~lg~~~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~~~--~~gl~~~~~ggG~~ 392 (401)
T 1ulq_A 315 DLGLIELNEAFAAQALAVLREWSLSMEDQRLNPNGGAIALGHPLGASGARILTTLVHEMRRRKV--QFGLATMCIGVGQG 392 (401)
T ss_dssp GCSEEEECCSBHHHHHHHHHHHTCCTTCTTBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHTTC--SEEEEEEEETTTEE
T ss_pred HcCEEEEecchHHHHHHHHHHcCCCCCCCccCCCCcccccCCCcchHHHHHHHHHHHHHhhcCC--CEEEEEeecCCccc
Confidence 9999999999999999999999994 5689999999999999999999999999999999977 99999999999999
Q ss_pred EEEEEEec
Q 012506 432 AAAVFERG 439 (462)
Q Consensus 432 ~A~v~~~~ 439 (462)
.|+||++.
T Consensus 393 ~a~v~~~~ 400 (401)
T 1ulq_A 393 IAVVVEGM 400 (401)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEeC
Confidence 99999873
|
| >1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-71 Score=573.53 Aligned_cols=381 Identities=40% Similarity=0.639 Sum_probs=342.9
Q ss_pred CCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCC
Q 012506 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (462)
Q Consensus 49 ~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~ 128 (462)
+++|||||++||||+| +.|.+++.++.+|+.+++++||+++|+++++||.+++|+..+... +++.++.++..+|+|.+
T Consensus 5 ~~~v~Ivg~~~tp~g~-~~g~~~~~~~~~L~~~a~~~Al~dAGl~~~~id~v~~g~~~~~~~-~~~~a~~ia~~lgl~~~ 82 (397)
T 1wl4_A 5 SDPVVIVSAARTIIGS-FNGALAAVPVQDLGSTVIKEVLKRATVAPEDVSEVIFGHVLAAGC-GQNPVRQASVGAGIPYS 82 (397)
T ss_dssp CSCEEEEEEEECCCEE-TTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTS-CSCHHHHHHHHTTCCTT
T ss_pred CCcEEEEEcccCCcee-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCC-CCHHHHHHHHHcCCCCC
Confidence 3689999999999998 568889999999999999999999999999999999999887654 67899999999999778
Q ss_pred cceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCC----CCCC-hhhhhhh---hhhccc--ccHHH
Q 012506 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWE----GSVN-PKVKAFE---QAQNCL--LPMGV 198 (462)
Q Consensus 129 ~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~----~~~~-~~~~~~~---~~~~~~--~~~g~ 198 (462)
+|.++|+++|+|+++||..|++.|++|++|++|++|+|+|+..|+... ..+. ..+.+.. ...+++ ..|+.
T Consensus 83 ~p~~~v~~aCaSg~~Ai~~A~~~I~~G~~d~vlagG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~ 162 (397)
T 1wl4_A 83 VPAWSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMENMSKAPHLAYLRTGVKIGEMPLTDSILCDGLTDAFHNCHMGI 162 (397)
T ss_dssp SCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESTTCCEECCCSSCCSSSCCCCEEHHHHHTTBCTTTCCBHHH
T ss_pred ccEEEecCcChhHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccccccccCcccccchhccccccCccccchHHH
Confidence 999999999999999999999999999999999999999997665321 1110 0111100 001112 56999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCC
Q 012506 199 TSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKP 278 (462)
Q Consensus 199 ~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p 278 (462)
.+++|+++||+|||+||+|+++||++|.+|++.|+|++||+||+++.++ .++++++|+.+|+++|+|+|.++||
T Consensus 163 ~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~------~~~~~~~d~~~r~~~t~e~~~~~rp 236 (397)
T 1wl4_A 163 TAENVAKKWQVSREDQDKVAVLSQNRTENAQKAGHFDKEIVPVLVSTRK------GLIEVKTDEFPRHGSNIEAMSKLKP 236 (397)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETT------EEEEECSCSCCCTTCCHHHHHTSCC
T ss_pred HHHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCcccceeeeeeccCC------CceeeccccccCCCCCHHHHhcCCC
Confidence 9999999999999999999999999999999999999999999875321 1246788999999999999999999
Q ss_pred cccCC--CCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCcc
Q 012506 279 VFKKD--GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDID 356 (462)
Q Consensus 279 ~f~p~--g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID 356 (462)
+|+|+ |++|.+|||+++|||+++||++++.|++++.+|+++|+|++..+..|+.++.++..+++++|+++||+++|||
T Consensus 237 vfd~~~~G~vt~~~~s~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId 316 (397)
T 1wl4_A 237 YFLTDGTGTVTPANASGINDGAAAVVLMKKSEADKRGLTPLARIVSWSQVGVEPSIMGIGPIPAIKQAVTKAGWSLEDVD 316 (397)
T ss_dssp SSCCSSCCCCCTTSBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCC
T ss_pred ccCCCCCCCEechhcCCccchhheeeEecHHHHHHcCCCccEEEEEEEEeecChhhccchHHHHHHHHHHHcCCCHHHCC
Confidence 99985 9999999999999999999999999999999999999999999999988889999999999999999999999
Q ss_pred EEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEE
Q 012506 357 LFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVF 436 (462)
Q Consensus 357 ~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~ 436 (462)
+||+||+|+++.+.+.|.||++++|+|++||++++|||+||||+++++++++||+++++ ++||+++|+|||+|.|+||
T Consensus 317 ~ie~~d~f~~~~l~~~~~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~~~--~~gl~~~~~ggG~~~a~~~ 394 (397)
T 1wl4_A 317 IFEINEAFAAVSAAIVKELGLNPEKVNIEGGAIALGHPLGASGCRILVTLLHTLERMGR--SRGVAALCIGGGMGIAMCV 394 (397)
T ss_dssp EEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHTC--CEEEEEEEETTTEEEEEEE
T ss_pred EEEEecccHHHHHHHHHHcCCCCcCcCCCcCccccCCChhhhHHHHHHHHHHHHhhcCC--CEEEEEEecccchheEEEE
Confidence 99999999999999999999999999999999999999999999999999999999977 9999999999999999999
Q ss_pred Eec
Q 012506 437 ERG 439 (462)
Q Consensus 437 ~~~ 439 (462)
|++
T Consensus 395 e~~ 397 (397)
T 1wl4_A 395 QRE 397 (397)
T ss_dssp EEC
T ss_pred EeC
Confidence 974
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-71 Score=573.93 Aligned_cols=381 Identities=40% Similarity=0.616 Sum_probs=345.0
Q ss_pred CCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCC
Q 012506 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (462)
Q Consensus 49 ~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~ 128 (462)
|++|+|||++||||+| ++|.+++.++.+|+.+|+++||+++|+++++||.+++|++.+... ++++++.++..+|+|.+
T Consensus 4 m~~v~Ivg~~rT~~g~-~~~~~~~~~~~~L~~~a~~~Al~~agi~~~~Id~v~~g~~~~~~~-~~~~a~~~~~~lGl~~~ 81 (395)
T 4e1l_A 4 MKDVVIVSAVRTPIGS-FGGVFKNTSAVQLGTIAVKEAISRVGLNLSEIDEVIIGNVLQTGL-GQNVARQIAINAGIPNS 81 (395)
T ss_dssp CCCEEEEEEEECCCEE-TTSTTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECCCCSST-TCCHHHHHHHHTTCCTT
T ss_pred CCeEEEEECccCCccc-cCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCC-cchHHHHHHHHcCCCCC
Confidence 5789999999999998 568889999999999999999999999999999999999987765 78899999999999878
Q ss_pred cceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCC-----CCC-Chhh-----hhhhhhhcccccHH
Q 012506 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWE-----GSV-NPKV-----KAFEQAQNCLLPMG 197 (462)
Q Consensus 129 ~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~-----~~~-~~~~-----~~~~~~~~~~~~~g 197 (462)
+|+++|+++|+|++++|+.|+++|++|++|++||+|+|+||+.|+... ..+ +..+ .+..........||
T Consensus 82 ~p~~~v~~~Css~~~al~~A~~~I~~G~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 161 (395)
T 4e1l_A 82 VPSYTVNKLCGSGLKSVQLAAQSITSGENDVVIAGGTENMSQAPYIVPTARFGSKMGNITMVDSMLTDGLIDAFNQYHMG 161 (395)
T ss_dssp SCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTHHHHSBHHHHEEESCCC------CCTTEEEETTHHHHH
T ss_pred ceEEEccccchHHHHHHHHHHHHHhCCCCCEEEEEEEecccCCcccccccccccccCccccchhhcccccccccccchHH
Confidence 999999999999999999999999999999999999999998654210 000 0000 01000111125799
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCC
Q 012506 198 VTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLK 277 (462)
Q Consensus 198 ~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~ 277 (462)
+++++|+++||++||+|++|+++||++|.+|+++|+|++||+||+++.++ .+++++++|+.+|+++|+|+|.+++
T Consensus 162 ~~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~~~~ei~pv~~~~~~-----g~~~~~~~d~~~r~~~t~e~l~~~~ 236 (395)
T 4e1l_A 162 ITAENIATKFEFTREMQDKLALESQNKAENAIKNNRFKEEIVPVDVLIRR-----GKIETIDKDEYPKLGMTFEGLSKLK 236 (395)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEET-----TEEEEECSCSCCCTTCCHHHHHHCC
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeEeccCC-----CcceEECCccccCCCCCHHHHhhCC
Confidence 99999999999999999999999999999999999999999999875422 1234688999999999999999999
Q ss_pred CcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccE
Q 012506 278 PVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDL 357 (462)
Q Consensus 278 p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~ 357 (462)
|+|+|+|++|.+|+|+++||++++||++++.|++++.+|+++|.+++....+|..++.++..+++++|+++||+++|||+
T Consensus 237 ~v~~~~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ 316 (395)
T 4e1l_A 237 PAFKKDGTVTAGNASGINDGAAMLILMSQQKADELGIRPLAKIKSYASAGVEPEVMGTGPIPATRKALKKAGLSINDIDL 316 (395)
T ss_dssp BSSSTTCSCBTTSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGTTCTHHHHHHHHHHHTTCCGGGCSE
T ss_pred CccCCCCCeeCCcCCCccceEEEEEEecHHHHHHCCCCeEEEEEEEEEccCCCCcchHHHHHHHHHHHHHcCCCHHHcCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEE
Q 012506 358 FEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFE 437 (462)
Q Consensus 358 ~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~ 437 (462)
||+||+|++..+.+.|.||++++|+|++||++++|||+||||+++++++++||+++++ ++||+++|+|||+|.|++||
T Consensus 317 ve~~d~fa~~~~~~~~~lg~~~~~v~~~gg~~~~Gh~~gasG~~~~~~~~~~L~~~~~--~~gl~~~c~ggG~g~a~~~e 394 (395)
T 4e1l_A 317 IEANEAFAAQALAVKNELQIDSSKLNVNGGAIALGHPIGASGARILVTLIYEMQKRKV--ETGLATLCIGGGQGISMVVS 394 (395)
T ss_dssp EEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCTTTHHHHHHHHHHHHHHHHTC--SEEEEEEESSTTEEEEEEEE
T ss_pred EEecChhHHHHHHHHHHhCCCCCCCCcCCchhhcCCcHHHHHHHHHHHHHHHHHhcCC--CEEEEEEccCCCceEEEEEe
Confidence 9999999999999999999999999999999999999999999999999999999987 99999999999999999998
Q ss_pred e
Q 012506 438 R 438 (462)
Q Consensus 438 ~ 438 (462)
+
T Consensus 395 ~ 395 (395)
T 4e1l_A 395 R 395 (395)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-71 Score=569.09 Aligned_cols=380 Identities=43% Similarity=0.657 Sum_probs=341.6
Q ss_pred CCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCC
Q 012506 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET 128 (462)
Q Consensus 49 ~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~ 128 (462)
|++|||||++||||+| +.|.+++.++.+|+.+++++||+++|+++++||.+++|++.+... +++.++.++..+|++..
T Consensus 2 m~~v~Ivg~~~t~~g~-~~g~~~~~~~~~L~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~-~~~~a~~ia~~lgl~~~ 79 (392)
T 2vu1_A 2 TPSIVIASAARTAVGS-FNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGE-GQNPARQAAMKAGVPQE 79 (392)
T ss_dssp CCCEEEEEEEECCCEE-TTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTS-CSCHHHHHHHHTTCCTT
T ss_pred CCCEEEEEeeecCccc-CCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCC-CcHHHHHHHHHcCCCCC
Confidence 4689999999999998 568899999999999999999999999999999999999887655 67899999999999655
Q ss_pred cceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCC----CCCCC------ChhhhhhhhhhcccccHHH
Q 012506 129 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMA----WEGSV------NPKVKAFEQAQNCLLPMGV 198 (462)
Q Consensus 129 ~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~----~~~~~------~~~~~~~~~~~~~~~~~g~ 198 (462)
+|.++|+++|+|+++||..|++.|++|++|++|++|+|+|+..|+. +...+ +..+............|+.
T Consensus 80 ~p~~~v~~aCaSgl~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (392)
T 2vu1_A 80 ATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGT 159 (392)
T ss_dssp SEEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEESTTCCEEECCTTCCCSSCEEEEEHHHHHHTBCTTTCCBHHH
T ss_pred ceEEEecccchHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCccccccccccccCcccccchhhhcccccccccchHHH
Confidence 8999999999999999999999999999999999999999886652 11111 0001100000111246999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCC
Q 012506 199 TSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKP 278 (462)
Q Consensus 199 ~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p 278 (462)
.+++|+++||+|||+||+|+++||++|.+|+++|+|++||+|+++..+ .+ ...+++|+.+|+++|+|+|.++||
T Consensus 160 ~a~~~~~~~g~s~e~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~---~~---~~~f~~d~~~r~~~t~e~~~~~~~ 233 (392)
T 2vu1_A 160 TAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGR---KG---DITVDADEYIRHGATLDSMAKLRP 233 (392)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEECCT---TC---CEEECSCSSCCTTCCHHHHHTCCC
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeeeeeeccC---CC---ceeeccccccCCCCCHHHHhcCCC
Confidence 999999999999999999999999999999999999999999976321 11 235789999999999999999999
Q ss_pred cccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccEE
Q 012506 279 VFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLF 358 (462)
Q Consensus 279 ~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~ 358 (462)
+|+++|++|.+|||+++|||+++||++++.|+++|.+|+++|.|++..+.+|+.++.++..+++++|+++||+++|||+|
T Consensus 234 v~~~~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dId~i 313 (392)
T 2vu1_A 234 AFDKEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLV 313 (392)
T ss_dssp SSCTTCCCCSSSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCSEE
T ss_pred ccCCCCCeeCcccCCccChhheeeEecHHHHHhcCCCccEEEEEEEEeecChhhcchhHHHHHHHHHHHcCCCHHHcCEE
Confidence 99999999999999999999999999999999999999999999999999998888899999999999999999999999
Q ss_pred EecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEe
Q 012506 359 EINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 359 eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
|+||+|+++.+.+.|.||++++|+|++||++++|||+||||+++++++++||+++++ ++||+++|+|||++.|++|++
T Consensus 314 e~~d~f~~~~l~~~~~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~~~--~~gl~~~~~ggG~~~a~~~e~ 391 (392)
T 2vu1_A 314 EANEAFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRRGA--RKGLATLCIGGGMGVAMCIES 391 (392)
T ss_dssp EECCSBHHHHHHHHHHHCCCGGGBSTTCCHHHHCCCGGGHHHHHHHHHHHHHHHHTC--SEEEEEEEETTTEEEEEEEEC
T ss_pred EeccccHHHHHHHHHHcCCCcccCCCCccHhhhCCChhhHHHHHHHHHHHHHhccCC--CEEEEEEecccchheEEEEEe
Confidence 999999999999999999999999999999999999999999999999999999977 999999999999999999986
|
| >1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-70 Score=566.18 Aligned_cols=380 Identities=43% Similarity=0.628 Sum_probs=342.4
Q ss_pred CCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHc-CCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCC
Q 012506 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKT-NVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE 127 (462)
Q Consensus 49 ~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~a-gl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~ 127 (462)
|++|||||++||||+|..+|.+++.++.+|+.+++++||+++ |+++++||.+++|+..++...+++.++.++..+|+|.
T Consensus 4 m~~v~Ivg~~~t~~g~~~~g~~~~~~~~~L~~~a~~~AL~dA~gl~~~~id~v~~g~~~~~~~~~~~~a~~ia~~lgl~~ 83 (390)
T 1wdk_C 4 PRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQIPH 83 (390)
T ss_dssp TTCEEEEEEEECCCEETTTCTTTTCCHHHHHHHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTSSSCT
T ss_pred CCcEEEEEcccCCceecCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeeccccCCCCcHHHHHHHHcCCCC
Confidence 578999999999999832688999999999999999999999 9999999999999987765435788999999999987
Q ss_pred CcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCC-ChhhhhhhhhhcccccHHHHHHHHHHH
Q 012506 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSV-NPKVKAFEQAQNCLLPMGVTSENVAHR 206 (462)
Q Consensus 128 ~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~a~~~~~~ 206 (462)
++|.++|+++|+|++.||+.|++.|++|++|++|++|+|.|+..|+... .+ ++.+... ..+...+|++++++|+++
T Consensus 84 ~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~p~~~~-~~~~~~~~~~--~~~~~~~~g~~a~~~~~~ 160 (390)
T 1wdk_C 84 TSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVSMMHG-VDPNPHMSLY--AAKASGMMGLTAEMLGKM 160 (390)
T ss_dssp TSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCTTTT-BCCCGGGGGT--SCGGGGSHHHHHHHHHHH
T ss_pred CccEEEEcccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccccCCcccc-cccCcccccc--CCcchhHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999987665321 11 1122111 123335699999999999
Q ss_pred hCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC-CCC
Q 012506 207 FGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK-DGT 285 (462)
Q Consensus 207 ~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p-~g~ 285 (462)
||+|+|++|+|+++||++|.+|+++|+|.+||+|++++.+ .+ ....+++|+.+|+++|+|+|.++||+|+| +|+
T Consensus 161 ~g~s~e~~~~~a~~s~~~a~~a~~~g~~~~ei~p~~~~~~---~~--~~~~fd~d~~~r~~~t~e~~~~~~~i~~p~~G~ 235 (390)
T 1wdk_C 161 HGISREQQDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDE---NG--FLKIFDYDETIRPDTTLESLAALKPAFNPKGGT 235 (390)
T ss_dssp HTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEECT---TC--CEEEECSCTTCCTTCCHHHHHTSCCSSCTTTCC
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHhcCCcccceeeeeeccC---CC--cceeeccccccCCCCCHHHHhcCCCcccCCCCc
Confidence 9999999999999999999999999999999999875321 01 11357889999999999999999999999 999
Q ss_pred cccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCCH
Q 012506 286 TTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFA 365 (462)
Q Consensus 286 ~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa 365 (462)
+|++|||+++|||+++||++++.|+++|.+|+++|+|++..+.+|+.++.++..+++++|+++||+++|||+||+||+|+
T Consensus 236 vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~ve~~d~f~ 315 (390)
T 1wdk_C 236 VTAGTSSQITDGASCMIVMSAQRAKDLGLEPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLNMADIDFIELNEAFA 315 (390)
T ss_dssp CCGGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCCEEEECCSBH
T ss_pred EechhcCcccchhheeEEecHHHHHHcCCCccEEEEEEEEeccChhhcchhHHHHHHHHHHHcCCChhhCcEEEeccCCH
Confidence 99999999999999999999999999999999999999999989988888999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCC---CCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEe
Q 012506 366 SQFVYCRNKLGLD---PEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 366 ~~~~~~~e~LGl~---~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
++++.+.|.||++ +.|+|++||++++|||+||||+++++++++||+++++ ++||+++|+|+|++.|+||++
T Consensus 316 ~~~~~~~~~lg~~~~~~~~vn~~gg~~~~GHp~gasG~~~~~~~~~~L~~~~~--~~gl~~~~~ggG~~~a~~~~~ 389 (390)
T 1wdk_C 316 AQALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQNGG--TFGLSTMCIGLGQGIATVFER 389 (390)
T ss_dssp HHHHHHHHHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHTTC--SEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHHHHHHcCCCCCCCCcCCCCcCcccccCCcchhHHHHHHHHHHHHhhcCC--CEEEEEecccchheEEEEEEe
Confidence 9999999999999 6799999999999999999999999999999999977 999999999999999999986
|
| >2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-68 Score=546.31 Aligned_cols=378 Identities=33% Similarity=0.545 Sum_probs=337.7
Q ss_pred CCCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCC
Q 012506 48 YGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPE 127 (462)
Q Consensus 48 ~~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~ 127 (462)
.+++|||||++||||+| +.|.+++.++.+|+.+++++||+++|+++++||.+++|++.+... +++.++.++..+|+|.
T Consensus 6 ~~~~v~Ivg~~rTp~g~-~~g~~~~~~~~~l~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~-~~~~a~~va~~lgl~~ 83 (395)
T 2ib8_A 6 TLKEVVIVSATRTPIGS-FLGSLSLLPATKLGSIAIQGAIEKAGIPKEEVKEAYMGNVLQGGE-GQAPTRQAVLGAGLPI 83 (395)
T ss_dssp BCCCEEEEEEEECCCEE-TTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTS-CSCHHHHHHHHTTCCT
T ss_pred CCCCeEEEecccccccc-cCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCC-CchHHHHHHHHcCCCC
Confidence 34789999999999998 568888999999999999999999999999999999999887665 7789999999999976
Q ss_pred CcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCC---CC-hh------hhhhhhhhcccccHH
Q 012506 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGS---VN-PK------VKAFEQAQNCLLPMG 197 (462)
Q Consensus 128 ~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~---~~-~~------~~~~~~~~~~~~~~g 197 (462)
++|+++|+++|+|+++||..|+++|++|++|++|++|+|.|+..++..... +. .. +....+ ......|+
T Consensus 84 ~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~m~ 162 (395)
T 2ib8_A 84 STPCTTINKVCASGMKAIMMASQSLMCGHQDVMVAGGMESMSNVPYVMNRGSTPYGGVKLEDLIVKDGLTD-VYNKIHMG 162 (395)
T ss_dssp TCCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGCCEEECSSBCCTTCEEEEEHHHHHTTEE-TTTTEEHH
T ss_pred CceEEEecccccHHHHHHHHHHHHHHCCCCCEEEEEeeecccCCccccccccccccccccccccccccccc-ccccchHH
Confidence 899999999999999999999999999999999999999998866521110 00 00 111111 11235799
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCC
Q 012506 198 VTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLK 277 (462)
Q Consensus 198 ~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~ 277 (462)
+++++|+++||++||++++++++||++|.+|++.|+|++||+|+++... .+.+.+++.|+.+| ++|+|.+.++|
T Consensus 163 ~~a~~~~~~~g~sre~~~~~A~~s~~~a~~a~~~~~f~~ei~p~~~~~~-----~~p~~~~~~D~~~r-~~~~~~l~~l~ 236 (395)
T 2ib8_A 163 SCAENTAKKLNIARNEQDAYAINSYTRSKAAWEAGKFGNEVIPVTVTVK-----GQPDVVVKEDEEYK-RVDFSKVPKLK 236 (395)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEECCT-----TSCCEEECSCSGGG-SCCTTTGGGSC
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcccccCcccceeeeeeccc-----CCcceeeccccccc-cCCHHHHhcCC
Confidence 9999999999999999999999999999999999999999999987321 11124688999999 59999999999
Q ss_pred CcccC-CCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCcc
Q 012506 278 PVFKK-DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDID 356 (462)
Q Consensus 278 p~f~p-~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID 356 (462)
|+|++ +|++|++|||+++|||+++||++++.|++++.+|+++|+|++..+.+|..++.++..+++++|+++||+++|||
T Consensus 237 ~~f~~~~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId 316 (395)
T 2ib8_A 237 TVFQKENGTVTAANASTLNDGAAALVLMTADAAKRLNVTPLARIVAFADAAVEPIDFPIAPVYAASMVLKDVGLKKEDIA 316 (395)
T ss_dssp CTTCSSSCCCCTTTBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHHTCCGGGEE
T ss_pred ccccCCCCCcccccCCccccceeEEEEecHHHHHhcCCCccEEEEEEEEeccChhhccccHHHHHHHHHHHcCCCHHHcC
Confidence 99954 89999999999999999999999999999999999999999998888888888889999999999999999999
Q ss_pred EEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEE
Q 012506 357 LFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVF 436 (462)
Q Consensus 357 ~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~ 436 (462)
+||+||+|+++++..+|+||++++|+|++||++++|||+||||+++++++++||++ + ++||+++|+|||+|.|++|
T Consensus 317 ~ie~~D~f~~~~l~~~e~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~--~--~~gl~~~~~ggG~g~a~~~ 392 (395)
T 2ib8_A 317 MWEVNEAFSLVVLANIKMLEIDPQKVNINGGAVSLGHPIGMSGARIVGHLTHALKQ--G--EYGLASICNGGGGASAMLI 392 (395)
T ss_dssp EEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHSCT--T--CEEEEEEEETTTEEEEEEE
T ss_pred EEEEccccHHHHHHHHHHcCCCccccCCCcchhhcCCChhHHHHHHHHHHHHHHhh--C--CceEEEEecccCHhheEEE
Confidence 99999999999999999999999999999999999999999999999999999997 5 7999999999999999999
Q ss_pred Ee
Q 012506 437 ER 438 (462)
Q Consensus 437 ~~ 438 (462)
|+
T Consensus 393 ~~ 394 (395)
T 2ib8_A 393 QK 394 (395)
T ss_dssp EE
T ss_pred Ec
Confidence 97
|
| >4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-58 Score=486.58 Aligned_cols=376 Identities=15% Similarity=0.149 Sum_probs=294.0
Q ss_pred CCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCC-----------CccccHHH
Q 012506 49 GDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPG-----------SQRASECR 117 (462)
Q Consensus 49 ~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~-----------~~~~~~a~ 117 (462)
++++||||++|||+.+ ++|.+++.++.||+.+|+++||+|+||++++||.+|.|++.... .+..+.++
T Consensus 17 PRtPVIVGvG~t~~r~-~~g~~~~~s~~dL~a~Ai~~AL~dAGl~p~~Vd~vI~g~~~~~~~~~~~~~~~~~g~~~~~~~ 95 (520)
T 4egv_A 17 PRTPVIVGVGQFTERI-DLDGYRGMSSVELATEAAKAALHDCGADADTVARAIDTVAGTRQFEISGPASAPLGVSSNYPR 95 (520)
T ss_dssp TTCEEEEEEEEEEC---------CCCHHHHHHHHHHHHHHHTSSCHHHHHHHCCEEEECCC--------------CCHHH
T ss_pred CCCeEEEEeeeccccC-CCCCCCCCCHHHHHHHHHHHHHHHhCcCHHHcceEEEEEeecccccccchhhhhhccccCHHH
Confidence 3778999999999975 56888999999999999999999999999999988877553221 12456788
Q ss_pred HHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhh--hhhhhccccc
Q 012506 118 MAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKA--FEQAQNCLLP 195 (462)
Q Consensus 118 ~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~--~~~~~~~~~~ 195 (462)
.++..+|++ ..+.++++.+|+|++++|+.|++.|++|++|+||++|+|+||+.|+.......+.+.. .....+....
T Consensus 96 ~va~~lGl~-~~~~~~~~~~caSg~~av~~AA~aI~aG~advvlAgG~EsMS~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (520)
T 4egv_A 96 SVARNIGAD-PAHAVLEVIGGQSPQHLATEFGGKIAAGENDVVLIFGSENTSTLRHFSKAENKPDHSETVDGQLEDRGYG 174 (520)
T ss_dssp HHHHHHTCC-CSEEEECCSSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECCC----------------------------
T ss_pred HHHHHcCCC-CceEEEecCCCHHHHHHHHHHHHHHHcCCCCEEEEEEEEeccccccccccccccCccccccccccccccc
Confidence 999999996 5789999999999999999999999999999999999999998876432211111111 1111223356
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecc-----cCCCCCCCCceEEeccCCCCCCCCH
Q 012506 196 MGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKI-----VDPKTGDEKPVTISVDDGIRPNTSV 270 (462)
Q Consensus 196 ~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~-----~np~a~~~~~~~v~~d~~~r~~~t~ 270 (462)
++..++++..+||+++++++.++..++.++..++..+.|++||+||.++. .|| ++.+|.++|+
T Consensus 175 ~~~~a~~~~~~~g~~~~~~~~~~~~s~~~a~~g~~~~~f~~eia~v~v~~~~~a~~np------------~a~~r~~~t~ 242 (520)
T 4egv_A 175 YDGIFDEYTIRHGLIGAPVQYGLLENARRARLGLSVADYRLAMAELFAPFSKVAAKNP------------YSSAPTERSV 242 (520)
T ss_dssp ------CTTGGGTCCSHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHCT------------TSSSCCCCCH
T ss_pred cchhHHHHHHHhCCCcHHHHHHHHHHHHHHHHccccchhhhheeEEEEecccccccCc------------cccccCCCCH
Confidence 77888999999999999999999999999999999999999999996642 355 4456777999
Q ss_pred HHHhcCCCcccC--CCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCC--------CccHHHH
Q 012506 271 SELAKLKPVFKK--DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIM--------GVGPAVA 340 (462)
Q Consensus 271 e~l~~~~p~f~p--~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~--------~~~~~~A 340 (462)
|++.+++|.|.+ ++.+|++|||+++|||+|+||+|+++|+++|++|+++|.+++..+.+|..+ +.++..+
T Consensus 243 E~l~~l~p~~r~i~~p~~ta~nas~isDGAAAvVL~S~e~A~~lGl~p~a~I~~~a~a~~~~~~~~~~~~~~~~~~~~~a 322 (520)
T 4egv_A 243 EELLTVTASNRMIVDPYPRLMVARDQVNQGAALLMMSVESARKLGVPEEKWVYLRGHADMKEPKLLERADIGASPASVTA 322 (520)
T ss_dssp HHHHSCCSSSCEEETTEEGGGCC--CCCEEEEEEEEEHHHHHHHTCCGGGCEEEEEEEEEECCCGGGCSCTTCCHHHHHH
T ss_pred HHhcccCcccccccCCcccccccCCCCcceEEEEEeeHHHHHHcCCCCceEEEEEEEeccCCcccccccccccChHHHHH
Confidence 999999998865 667789999999999999999999999999999999999998887766544 2356789
Q ss_pred HHHHHHHcCCCCCCccEEEecCCCHHHHHHHHHHcCCCC---CCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCC
Q 012506 341 IPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDP---EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDC 417 (462)
Q Consensus 341 i~~aL~~AGl~~~DID~~eihdafa~~~~~~~e~LGl~~---~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~ 417 (462)
++++|+++||+++|||+||+||||+++++.++|.||||+ .|+|++||++++|||++++|++.++++++|||++.+
T Consensus 323 ~~~al~~agl~~~did~~E~~dAF~~~~l~~~~~lG~~~~~~~~~n~~Gg~~~~Ghp~~a~g~~~~~~~v~~lr~~~~-- 400 (520)
T 4egv_A 323 VNEALRVAGIGLDDVAAFDLYSCFPFPVFNICDGTGLATDDPRGLTLTGGLPFFGGLGNNYSMHGIAEAVNEMRDKPG-- 400 (520)
T ss_dssp HHHHHHHHTCCGGGEEEEEECCSSSHHHHHHHHHHCCCTTCTTCSCSSCCHHHHCSCSSSHHHHHHHHHHHHHHHSTT--
T ss_pred HHHHHHHhCCCHHHCCEEEEeCCcHHHHHHHHHHhCCCCCCCCCcCCCcccccCCChHHHHHHHHHHHHHHHHhcCCC--
Confidence 999999999999999999999999999999999999964 489999999999999999999999999999999988
Q ss_pred cEEEEEeecccce--eEEEEEEeccc
Q 012506 418 RFGVISMCIGTGM--GAAAVFERGDC 441 (462)
Q Consensus 418 ~~gl~~~~~G~G~--g~A~v~~~~~~ 441 (462)
+++|++. .|+-. ..+++|.++..
T Consensus 401 ~~~L~~~-~gg~~~~~~~~~l~~~~~ 425 (520)
T 4egv_A 401 QFALVGA-NGGIASKYSVGIYSTEPA 425 (520)
T ss_dssp CEEEEEE-EETTTTEEEEEEEESSCC
T ss_pred CceEEeC-CCCeeeeeeEEEEcCCCC
Confidence 8999984 44432 34667777653
|
| >1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-32 Score=280.02 Aligned_cols=272 Identities=19% Similarity=0.247 Sum_probs=208.8
Q ss_pred HHHHHHHHHHHHHcCCCccccC----cEEEEeccCCCC-----------c--------------cccHHHHHHHHcCCCC
Q 012506 77 DLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS-----------Q--------------RASECRMAAFYAGFPE 127 (462)
Q Consensus 77 eL~~~A~~~Al~~agl~~~~Id----~vivG~~~~~~~-----------~--------------~~~~a~~~a~~~Glp~ 127 (462)
+|+.+++++||+++|+++++|| +|++|+..+... . ....+..++..+|+
T Consensus 79 ~l~l~aa~~Al~dAg~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl-- 156 (416)
T 1e5m_A 79 HFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGA-- 156 (416)
T ss_dssp HHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHHcCCChhhcCccceEEEEeecCCcHHHHHHHHHHHHhcCcccCChhHhhhhhhHHHHHHHHHHhCC--
Confidence 7999999999999999999999 699998765310 0 12467889999999
Q ss_pred CcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCC-CCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHH
Q 012506 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESM-TVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHR 206 (462)
Q Consensus 128 ~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~m-s~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~ 206 (462)
++|+++|+++|+|+++||+.|+++|++|++|++||+|+|.+ +... ..+
T Consensus 157 ~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~----------------------~~~--------- 205 (416)
T 1e5m_A 157 KGPNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLS----------------------YAG--------- 205 (416)
T ss_dssp CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHH----------------------HHH---------
T ss_pred CCceeCccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHH----------------------HHH---------
Confidence 47999999999999999999999999999999999999985 3200 000
Q ss_pred hCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCc
Q 012506 207 FGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTT 286 (462)
Q Consensus 207 ~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~ 286 (462)
| . ..+.+.. +..+| ++. .+| |+.
T Consensus 206 ----------~-----~------~~~~ls~-------~~~~p------------~~~------------~rp-fd~---- 228 (416)
T 1e5m_A 206 ----------F-----A------SARALSF-------RNDDP------------LHA------------SRP-FDK---- 228 (416)
T ss_dssp ----------H-----H------HTTCBCC-------CTTCG------------GGT------------CCT-TBT----
T ss_pred ----------H-----H------HcCCccC-------CCCCC------------ccc------------ccc-Ccc----
Confidence 0 0 0011100 00011 222 234 543
Q ss_pred ccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccC-----CCCCCccHHHHHHHHHHHcCCCCCCccEEEec
Q 012506 287 TAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVD-----PAIMGVGPAVAIPAAVKSAGLQLDDIDLFEIN 361 (462)
Q Consensus 287 t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~-----p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eih 361 (462)
..+...++|||+++||++++.|+++|.+++++|.|++..... |+..+.+...+++++|+++||+++|||++|+|
T Consensus 229 -~~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve~H 307 (416)
T 1e5m_A 229 -DRDGFVMGEGSGILILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAH 307 (416)
T ss_dssp -TCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECC
T ss_pred -CCCCceeeeeEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhHCCEEEEE
Confidence 224455899999999999999999999999999999987643 54455667889999999999999999999999
Q ss_pred CCCHHH----HHH-HHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcC--------------C-------
Q 012506 362 EAFASQ----FVY-CRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG--------------R------- 415 (462)
Q Consensus 362 dafa~~----~~~-~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~--------------~------- 415 (462)
++++.. +.. +.+.+|...+++++++.+..+|||+||+|+.++++++++|+++. .
T Consensus 308 gtgt~~~D~~E~~al~~~~g~~~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~~~ 387 (416)
T 1e5m_A 308 GTSTPANDVTETRAIKQALGNHAYNIAVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENPDPECDLDYVPGQ 387 (416)
T ss_dssp CCSCHHHHHHHHHHHHHHHGGGGGGSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCSCCCBSS
T ss_pred CCCCcCcCHHHHHHHHHHHcccCCCCeeeCcchhhcccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccCCc
Confidence 999873 332 23456665567788777777999999999999999999999853 0
Q ss_pred ----CCcEEEEEeecccceeEEEEEEec
Q 012506 416 ----DCRFGVISMCIGTGMGAAAVFERG 439 (462)
Q Consensus 416 ----~~~~gl~~~~~G~G~g~A~v~~~~ 439 (462)
+.++++++.++.||.+.++||++.
T Consensus 388 ~~~~~~~~a~~~sfGfGG~n~~~vl~~~ 415 (416)
T 1e5m_A 388 SRALIVDVALSNSFGFGGHNVTLAFKKY 415 (416)
T ss_dssp CEECCCSEEEEEEEETTTEEEEEEEECC
T ss_pred cccCCCCEEEEccccCCCeeEEEEEEeC
Confidence 247899988888888899999863
|
| >3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-31 Score=278.86 Aligned_cols=277 Identities=20% Similarity=0.261 Sum_probs=212.7
Q ss_pred CHHHHHHHHHHHHHHHcCCCccc-cC----cEEEEeccCC-------------------------CCccccHHHHHHHHc
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPSE-VG----DIVVGTVLAP-------------------------GSQRASECRMAAFYA 123 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~~-Id----~vivG~~~~~-------------------------~~~~~~~a~~~a~~~ 123 (462)
...+|+.+|+++||+|+|+++++ || ++++|+..+. .......+..++..+
T Consensus 86 ~~~~l~l~aa~~AL~dAGl~~~~~id~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~l 165 (428)
T 3kzu_A 86 PFIVYAVGAADQALDDAGWHPENDEDQVRTGVLIGSGIGGIEGIVEAGYTLRDKGPRRISPFFIPGRLINLASGHVSIKH 165 (428)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTTTTTTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCChhhhccccceEEEEcccCCcchhHHHHHHHHHhcCccccCchhcccchhhhHHHHHHHHc
Confidence 35789999999999999999998 88 5788875321 011234577899999
Q ss_pred CCCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHH
Q 012506 124 GFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENV 203 (462)
Q Consensus 124 Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~ 203 (462)
|+ +.|.++|+++|+|+++||..|+++|++|++|++||+|+|++... +
T Consensus 166 gl--~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~------------------------~------- 212 (428)
T 3kzu_A 166 KL--RGPNHSVVTACATGTHAIGDAARLIAFGDADVMVAGGTESPVSR------------------------I------- 212 (428)
T ss_dssp TC--CSCEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSH------------------------H-------
T ss_pred CC--CCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeeecCcCCH------------------------H-------
Confidence 99 46999999999999999999999999999999999999996330 0
Q ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCC
Q 012506 204 AHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKD 283 (462)
Q Consensus 204 ~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~ 283 (462)
.+..|. ..+.+.. +. .+ +.-...+| |+.
T Consensus 213 ---------~~~~~~-----------~~~~ls~------------------------~~-----~~-~~~~~~~p-fd~- 240 (428)
T 3kzu_A 213 ---------SLAGFA-----------ACKALST------------------------ER-----ND-DPTAASRP-YDE- 240 (428)
T ss_dssp ---------HHHHHH-----------HTTCBCC------------------------SC-----TT-SGGGTCCT-TBT-
T ss_pred ---------HHHHHH-----------Hcccccc------------------------Cc-----cC-CcccccCC-ccc-
Confidence 000000 0001100 00 00 00012234 432
Q ss_pred CCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEec-----cCCCCCCccHHHHHHHHHHHcCCCCCCccEE
Q 012506 284 GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDDIDLF 358 (462)
Q Consensus 284 g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~-----~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~ 358 (462)
..++..++|||+++||++.+.|++++.+++++|.|++... ..|...+.+...+++++|+++||+++|||++
T Consensus 241 ----~~~G~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~v 316 (428)
T 3kzu_A 241 ----DRDGFVMGEGAGIVVLEELEHALARGAKIYAEVIGYGMSGDAFHITAPTESGEGAQRCMVAALKRAGIVPDEIDYI 316 (428)
T ss_dssp ----TCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEE
T ss_pred ----CCCceeecCceEEEEEccHHHHHhCCCceEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHeeEE
Confidence 2245558999999999999999999999999999999876 3566666778899999999999999999999
Q ss_pred EecCCCHHH----HHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcC--------------------
Q 012506 359 EINEAFASQ----FVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG-------------------- 414 (462)
Q Consensus 359 eihdafa~~----~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~-------------------- 414 (462)
|+|++++.. ...+.+.+|.+.+++|++|++..+|||+||+|+.++++++++|+++.
T Consensus 317 e~HgtgT~~d~~e~~al~~~~g~~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~ 396 (428)
T 3kzu_A 317 NAHGTSTMADTIELGAVERVVGEAAAKISMSSTKSSIGHLLGAAGAAEAVFSTLAIRDNIAPATLNLDNPAAQTRIDLVP 396 (428)
T ss_dssp ECCCCSSTTHHHHHHHHHHHHGGGGGGCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBSSCCSSBCCB
T ss_pred EecCCcchhhHHHHHHHHHHhccCCCceeeCCchhhhCCCchhhHHHHHHHHHHHhccCccCCCCCCCCCCCCCCcccCC
Confidence 999887732 23344557887789999999999999999999999999999999861
Q ss_pred -----CCCcEEEEEeecccceeEEEEEEec
Q 012506 415 -----RDCRFGVISMCIGTGMGAAAVFERG 439 (462)
Q Consensus 415 -----~~~~~gl~~~~~G~G~g~A~v~~~~ 439 (462)
.+.++++++.++.||.+.++||++.
T Consensus 397 ~~~~~~~~~~a~~~sfGfgG~na~~vl~~~ 426 (428)
T 3kzu_A 397 HKPRERKIDVALSNSFGFGGTNASLVLRRY 426 (428)
T ss_dssp SSCEECCCSEEEEEEEETTTEEEEEEEECC
T ss_pred CCCcCCCCCEEEEeCcccChhhEEEEEeec
Confidence 1247899988888889999999864
|
| >3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-32 Score=284.59 Aligned_cols=273 Identities=17% Similarity=0.244 Sum_probs=212.1
Q ss_pred HHHHHHHHHHHHHHcCCCccccC----cEEEEeccCCCC-------------------------ccccHHHHHHHHcCCC
Q 012506 76 DDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS-------------------------QRASECRMAAFYAGFP 126 (462)
Q Consensus 76 ~eL~~~A~~~Al~~agl~~~~Id----~vivG~~~~~~~-------------------------~~~~~a~~~a~~~Glp 126 (462)
..|+.+++++||+++|+++++|| ++++|+..+... .....+..++..+|+
T Consensus 89 ~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl- 167 (427)
T 3ho9_A 89 IQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGL- 167 (427)
T ss_dssp HHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHCCCCcccccccceEEEEccccccHHHHHHHHHHHHhcCccccCcceeccccchHHHHHHHHHhCC-
Confidence 56899999999999999999999 488887643210 012357789999999
Q ss_pred CCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHH
Q 012506 127 ETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHR 206 (462)
Q Consensus 127 ~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~ 206 (462)
+.|+++|+++|+|+++||+.|+++|++|++|++||+|+|.++.... ..+.
T Consensus 168 -~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~---------------------~~~~-------- 217 (427)
T 3ho9_A 168 -RGPSISIATAATSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLG---------------------VGGF-------- 217 (427)
T ss_dssp -CSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHH---------------------HHHH--------
T ss_pred -CCCeecccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHH---------------------HHHH--------
Confidence 4799999999999999999999999999999999999999865100 0000
Q ss_pred hCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCc
Q 012506 207 FGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTT 286 (462)
Q Consensus 207 ~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~ 286 (462)
.. .+.+.. .++ ..+ ...+| |+.
T Consensus 218 ----------------~~------~~~ls~-----------------------~~~------~~~--~~~~p-fd~---- 239 (427)
T 3ho9_A 218 ----------------GA------ARALST-----------------------RND------NPQ--AASRP-WDK---- 239 (427)
T ss_dssp ----------------HH------TTCBCC-----------------------CTT------CHH--HHCCT-TBT----
T ss_pred ----------------Hh------ccCccc-----------------------CCC------CCC--cccCC-ccC----
Confidence 00 000000 000 000 12334 332
Q ss_pred ccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEec-----cCCCCCCccHHHHHHHHHHHcCCCCCCccEEEec
Q 012506 287 TAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEIN 361 (462)
Q Consensus 287 t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~-----~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eih 361 (462)
..+...++|||+++||++++.|+++|.+++++|.|++... ..|...+.+...+++++|+++||+++|||++|+|
T Consensus 240 -~~~G~v~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~H 318 (427)
T 3ho9_A 240 -ERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAH 318 (427)
T ss_dssp -TCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSBTTBCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECC
T ss_pred -CCCCceeeeeEEEEEEccHHHHHHCCCcEEEEEEEEeecCCCCCcCCCCCCHHHHHHHHHHHHHHcCCCHHHccEEEec
Confidence 1233448999999999999999999999999999998875 3455566778899999999999999999999999
Q ss_pred CCCHH-----HHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcC---------------------C
Q 012506 362 EAFAS-----QFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG---------------------R 415 (462)
Q Consensus 362 dafa~-----~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~---------------------~ 415 (462)
.+++. ....+.+.||.+.+++|+++++..+|||+||+|+.++++++++|+++. .
T Consensus 319 gtgT~~~d~~e~~a~~~~~g~~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~ 398 (427)
T 3ho9_A 319 GTSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVPHE 398 (427)
T ss_dssp CCSCHHHHHHHHHHHHHHHGGGGGTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCCBCCBSS
T ss_pred CCcCCCcCHHHHHHHHHHhcccCCCeEEecchHhhccCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCccccccc
Confidence 76665 445566778888889999999999999999999999999999999861 0
Q ss_pred -----CCcEEEEEeecccceeEEEEEEe
Q 012506 416 -----DCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 416 -----~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
+.++++++.++.||.+.++||++
T Consensus 399 ~~~~~~~~~a~~~sfGfgG~na~~vl~~ 426 (427)
T 3ho9_A 399 ARQVSGMEYTLCNSFGFGGTNGSLIFKK 426 (427)
T ss_dssp CEECSSCCEEEEEEEETTTEEEEEEEEC
T ss_pred cccCCCCCEEEEeCccCCceeEEEEEEe
Confidence 34889999888888999999875
|
| >3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-31 Score=274.66 Aligned_cols=274 Identities=19% Similarity=0.238 Sum_probs=211.8
Q ss_pred HHHHHHHHHHHHHHHcCCCccccC----cEEEEeccCCC-----------------C--------ccccHHHHHHHHcCC
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPG-----------------S--------QRASECRMAAFYAGF 125 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id----~vivG~~~~~~-----------------~--------~~~~~a~~~a~~~Gl 125 (462)
...|+.+|+++||+++|+++++|| +|++|+..+.. . .....+..++..+|+
T Consensus 74 ~~~l~l~Aa~~AL~dAGl~~~~id~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl 153 (413)
T 3o04_A 74 FTHYAIASAEMAVQDSGLVIDDSNANRVGVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFGA 153 (413)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCChhHcCccceEEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhcccccHHHHHHHHHhCC
Confidence 466999999999999999999999 89999864221 0 011247789999999
Q ss_pred CCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHH
Q 012506 126 PETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAH 205 (462)
Q Consensus 126 p~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~ 205 (462)
+.|+++|+++|+|+++||..|+++|++|++|++||+|+|++..... ..+
T Consensus 154 --~gp~~~v~~aCss~~~Al~~A~~~I~~G~~d~~lvgG~e~~~~~~~---------------------~~~-------- 202 (413)
T 3o04_A 154 --KGINSTTVTACATATNSIGDAFKVIERGDADAMITGGAEAPITKMS---------------------LAG-------- 202 (413)
T ss_dssp --CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHH---------------------HHH--------
T ss_pred --CCcceeecchhHHHHHHHHHHHHHHHcCCCCEEEEeEEcccCCHHH---------------------HHH--------
Confidence 4699999999999999999999999999999999999999654100 000
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCC
Q 012506 206 RFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGT 285 (462)
Q Consensus 206 ~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~ 285 (462)
+. ..+.+... .+| +.. .+| |+.
T Consensus 203 ----------------~~------~~~~ls~~--------~~p------------~~~------------~~p-fd~--- 224 (413)
T 3o04_A 203 ----------------FT------ANKALSLN--------PDP------------ETA------------CRP-FDK--- 224 (413)
T ss_dssp ----------------HH------HTTCBCCC--------CCT------------TTS------------CCT-TBT---
T ss_pred ----------------HH------hcccccCC--------CCC------------CCC------------cCC-CcC---
Confidence 00 00111100 011 111 223 432
Q ss_pred cccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEec-----cCCCCCCccHHHHHHHHHHHcCCCCCCccEEEe
Q 012506 286 TTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEI 360 (462)
Q Consensus 286 ~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~-----~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~ei 360 (462)
..+...++|||+++||++.+.|++++.+++++|.|++... ..|...+.+...+++++|+++||+++|||++|+
T Consensus 225 --~~~g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~ve~ 302 (413)
T 3o04_A 225 --DRDGFIIGEGAGIVILEEYEHAKARGAKIYAEIVGYGATGDAYHITAPAPNGEGAARAMKMAIDDAGLTPDKVDYINA 302 (413)
T ss_dssp --TCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGGCCEEEC
T ss_pred --CCCCceEeccEEEEEEeeHHHHHhCCCeEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEE
Confidence 1234458999999999999999999999999999998875 344555566788999999999999999999999
Q ss_pred cCCCHHH----HHHHH-HHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcC---------------------
Q 012506 361 NEAFASQ----FVYCR-NKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG--------------------- 414 (462)
Q Consensus 361 hdafa~~----~~~~~-e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~--------------------- 414 (462)
|++++.. +...+ +.+|...+++|+++++..+|||+||+|+.++++++++|+++.
T Consensus 303 HgtgT~~~d~~e~~al~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~ 382 (413)
T 3o04_A 303 HGTSTPYNDEYETQAIKTVFGEHAKKLAISSTKSMTGHTLGASGGIEAIFALLTIRDNIIAPTIHLKNQDEVCDLDYVPN 382 (413)
T ss_dssp CCCCCHHHHHHHHHHHHHHHGGGTTTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCCSBCSSCCSCCCBS
T ss_pred eCCcCcccCHHHHHHHHHHhcccCCCCceecccccccccHHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCcccCCC
Confidence 9999973 33333 345666678999999999999999999999999999999752
Q ss_pred ----CCCcEEEEEeecccceeEEEEEEec
Q 012506 415 ----RDCRFGVISMCIGTGMGAAAVFERG 439 (462)
Q Consensus 415 ----~~~~~gl~~~~~G~G~g~A~v~~~~ 439 (462)
.+.++++++.+..||.+.++||++.
T Consensus 383 ~~~~~~~~~~~~~sfgfgG~na~~vl~~~ 411 (413)
T 3o04_A 383 EAREANVNVVISNSFGFGGHNATLVFKRI 411 (413)
T ss_dssp SCEECCCCEEEEEEEETTTEEEEEEEECC
T ss_pred cccCCCCCEEEEeCccCCceEEEEEEEeC
Confidence 1348899999899999999999875
|
| >1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-32 Score=280.60 Aligned_cols=275 Identities=20% Similarity=0.302 Sum_probs=212.2
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCc----EEEEeccCCCC-------------------------ccccHHHHHHHHcC
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPSEVGD----IVVGTVLAPGS-------------------------QRASECRMAAFYAG 124 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~~Id~----vivG~~~~~~~-------------------------~~~~~a~~~a~~~G 124 (462)
...+|+.+++++||+++|+++++||. +++|+..++.. .....+..++..+|
T Consensus 70 ~~~~l~~~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 149 (408)
T 1j3n_A 70 RFVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYG 149 (408)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCccccCCCceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhhhhhhHHHHHHHHHhC
Confidence 45789999999999999999999995 67776544310 01135788899999
Q ss_pred CCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHH
Q 012506 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVA 204 (462)
Q Consensus 125 lp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~ 204 (462)
+ +.|+++|+++|+|+++||+.|+++|++|++|++||+|+|.+.. ++.....
T Consensus 150 l--~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~------------------------~~~~~~~--- 200 (408)
T 1j3n_A 150 F--TGPSSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAIT------------------------PMAIGAF--- 200 (408)
T ss_dssp C--CSCBCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS------------------------HHHHHHH---
T ss_pred C--CCceeCccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecccCC------------------------HHHHHHH---
Confidence 9 4699999999999999999999999999999999999998643 0000000
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCC
Q 012506 205 HRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDG 284 (462)
Q Consensus 205 ~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g 284 (462)
.. .+.+. +. +.+.+ ...+| |+.
T Consensus 201 ------------------~~------~~~ls------------~~-----------------~~~p~--~~~~p-fd~-- 222 (408)
T 1j3n_A 201 ------------------AV------MRALS------------TR-----------------NEEPE--KASRP-FTL-- 222 (408)
T ss_dssp ------------------HH------TTCBC------------CC-----------------TTCHH--HHCCT-TBT--
T ss_pred ------------------Hh------ccccc------------CC-----------------CCCCC--cCccc-CcC--
Confidence 00 00110 00 00111 12334 432
Q ss_pred CcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEec-----cCCCCCCccHHHHHHHHHHHcCCCCCCccEEE
Q 012506 285 TTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFE 359 (462)
Q Consensus 285 ~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~-----~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~e 359 (462)
..+...++|||+++||++.+.|+++|.+++++|.|++... ..|...+.+...+++++|+++||+++|||++|
T Consensus 223 ---~~dg~v~geGaaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve 299 (408)
T 1j3n_A 223 ---SRDGFVMGEGAGVLVLEAYEHAKKRGARIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYIN 299 (408)
T ss_dssp ---TCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEE
T ss_pred ---CCCceEEeeeEEEEEEeeHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEE
Confidence 1244558999999999999999999999999999998875 34555566778899999999999999999999
Q ss_pred ecCCCHHH-----HHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcC--------------------
Q 012506 360 INEAFASQ-----FVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG-------------------- 414 (462)
Q Consensus 360 ihdafa~~-----~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~-------------------- 414 (462)
+|++++.. ...+.+.||.+.+++|+++++..+||+.||+|+.+++.++++|+++.
T Consensus 300 ~Hgtgt~~gD~~E~~al~~~~g~~~~~~~v~s~k~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~~~~v~ 379 (408)
T 1j3n_A 300 AHGTSTPVGDRAEVLAIKRVFGDHAKRLMVSSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLEDPDPELDLDFVP 379 (408)
T ss_dssp CCCCSCHHHHHHHHHHHHHHHHHHHTTCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTTTSBCTTSCSBCCS
T ss_pred EeCCcCcccCHHHHHHHHHHhcCcCCCceEECchhhhccCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcccCC
Confidence 99999975 34455678887778999999999999999999999999999999852
Q ss_pred ----CCCcEEEEEeecccceeEEEEEEe
Q 012506 415 ----RDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 415 ----~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
.+.++++++.++.||.+.++||++
T Consensus 380 ~~~~~~~~~a~~~sfGfGG~na~~vl~~ 407 (408)
T 1j3n_A 380 EPREAKVDYALSNSFAFGGHNAVLAFKR 407 (408)
T ss_dssp SCEECCCSEEEEEEECTTSEEEEEEEEC
T ss_pred CCcCCCCCEEEEecccCCcceEEEEEec
Confidence 023789998888888999999975
|
| >3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.4e-30 Score=270.86 Aligned_cols=273 Identities=16% Similarity=0.175 Sum_probs=206.9
Q ss_pred HHHHHHHHHHHHHHHcCCCccccC----cEEEEeccCCCC-------------------------ccccHHHHHHHHcCC
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS-------------------------QRASECRMAAFYAGF 125 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id----~vivG~~~~~~~-------------------------~~~~~a~~~a~~~Gl 125 (462)
..+|+.+++++||+++|+++++|| ++++|+..+... .....+..++..+|+
T Consensus 92 ~~~l~~~aa~~Al~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl 171 (428)
T 3mqd_A 92 GTAWNHIAMDQAIADAGLTEEEVSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATFFKI 171 (428)
T ss_dssp HHHHHHHHHHHHHHHHTCCHHHHSSTTEEEEEEESSCCHHHHHHHHHHHHHHCGGGGCTTCHHHHSTTHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHcCCChhHccccceEEEEccCCCchHHHHHHHHHHHhcCccccCchhhccccccHHHHHHHHHcCC
Confidence 467999999999999999999999 688887644311 012467889999999
Q ss_pred CCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHH
Q 012506 126 PETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAH 205 (462)
Q Consensus 126 p~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~ 205 (462)
++|+++|+++|+|+++||+.|+++|++|++|++||+|+|+|+..+. ++ ..
T Consensus 172 --~gp~~tv~~aCsSgl~Ai~~A~~~I~~G~~d~alvgG~e~~s~~~~----------------------~~------~~ 221 (428)
T 3mqd_A 172 --KGINYSISSACATSNHCIGNAYEMIQYGKQDRMFAGGCEDLDWTLS----------------------VL------FD 221 (428)
T ss_dssp --CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHH----------------------HH------HH
T ss_pred --CCceeeecCccHHHHHHHHHHHHHHHcCCCCEEEEEeecccchHHH----------------------HH------HH
Confidence 5799999999999999999999999999999999999999865110 00 00
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCC
Q 012506 206 RFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGT 285 (462)
Q Consensus 206 ~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~ 285 (462)
. .+.+.. ... .+++. ..+| |+.
T Consensus 222 ~------------------------~~~ls~------------~~~------~~p~~------------~~rp-fd~--- 243 (428)
T 3mqd_A 222 A------------------------MGAMSS------------KYN------DTPST------------ASRA-YDK--- 243 (428)
T ss_dssp H------------------------TTCBCC------------TTT------TSGGG------------SCCT-TBT---
T ss_pred H------------------------hhhhcc------------ccc------CCccc------------ccCc-ccC---
Confidence 0 000000 000 00111 1234 443
Q ss_pred cccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCC---CCCccHHHHHHHHHHHcCCCCCCccEEEecC
Q 012506 286 TTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPA---IMGVGPAVAIPAAVKSAGLQLDDIDLFEINE 362 (462)
Q Consensus 286 ~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~---~~~~~~~~Ai~~aL~~AGl~~~DID~~eihd 362 (462)
..+...++|||+++||++++.|+++|.+|+++|.|++....... .++.++..+++++|+ |++ +||||||+|.
T Consensus 244 --~~~G~v~gEGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~P~~~~~~~ai~~Al~--gl~-~dId~ve~Hg 318 (428)
T 3mqd_A 244 --NRDGFVIAGGAGVLVLEDLETALARGAKIYGEIVGYGATSDGYDMVAPSGEGAIRCMKMALS--TVT-SKIDYINPHA 318 (428)
T ss_dssp --TCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCSHHHHHHHHHHHT--TCC-SCCCEEECCC
T ss_pred --CCCCcccccceEEEEEccHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHHHh--CCc-cccCEEEEeC
Confidence 12334489999999999999999999999999999998873322 146678899999999 999 9999999999
Q ss_pred CCHHH----HHHH-HHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcC-----------------------
Q 012506 363 AFASQ----FVYC-RNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG----------------------- 414 (462)
Q Consensus 363 afa~~----~~~~-~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~----------------------- 414 (462)
+++.. +... .+.+|...+.+++++.+..+|||+||+|+++++.++++|+++.
T Consensus 319 tgT~~~D~~E~~al~~~~~~~~~~~~v~s~K~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~~~~~~ 398 (428)
T 3mqd_A 319 TSTPAGDAPEIEAIRQIFGAGDVCPPIAATKSLTGHSLGATGVQEAIYSLLMMQNNFICESAHIEELDPAFADMPIVRKR 398 (428)
T ss_dssp CSCHHHHHHHHHHHHHHHCSGGGSCCBCCTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCGGGTTSCBCSSC
T ss_pred CCCCCcCHHHHHHHHHHhcccCCCceeecchhhhcccHHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCcccccCCccCCc
Confidence 99863 3333 4556754555678888888999999999999999999999751
Q ss_pred ---CCCcEEEEEeecccceeEEEEEEecc
Q 012506 415 ---RDCRFGVISMCIGTGMGAAAVFERGD 440 (462)
Q Consensus 415 ---~~~~~gl~~~~~G~G~g~A~v~~~~~ 440 (462)
...++++++..+.||.+.++||++.+
T Consensus 399 ~~~~~~~~~~~~sfGfGG~Na~~vl~~~~ 427 (428)
T 3mqd_A 399 IDNVQLNTVLSNSFGFGGTNATLVFQRYQ 427 (428)
T ss_dssp EESCCCCEEEEEEEETTTEEEEEEEECCC
T ss_pred cccCCCCEEEEecCcCCcceEEEEEeecC
Confidence 12378888888888899999998754
|
| >2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-30 Score=270.69 Aligned_cols=269 Identities=21% Similarity=0.225 Sum_probs=207.0
Q ss_pred HHHHHHHHHHHHHHcCCCccccCc----EEEEeccCCCC-----------c--------------cccHHHHHHHHcCCC
Q 012506 76 DDLLAPVLKAVIEKTNVDPSEVGD----IVVGTVLAPGS-----------Q--------------RASECRMAAFYAGFP 126 (462)
Q Consensus 76 ~eL~~~A~~~Al~~agl~~~~Id~----vivG~~~~~~~-----------~--------------~~~~a~~~a~~~Glp 126 (462)
.+|+.+++++||+++|+ +++|. |++|+..++.. . ....+..++..+|+
T Consensus 84 ~~l~l~aa~~AL~dAG~--~~~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl- 160 (416)
T 2wge_A 84 QRMGKLLGGQLWESAGS--PEVDPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLGA- 160 (416)
T ss_dssp HHHHHHHHHHHHHHTTC--CCCCGGGEEEEEECCSCCCTHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHcCC--CccCCCceEEEEeecCCcHHHHHHHHHHHHhcCcccCCchhhccccchhHHHHHHHHhcc-
Confidence 47999999999999998 55653 88988765431 0 01357788999999
Q ss_pred CCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHH
Q 012506 127 ETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHR 206 (462)
Q Consensus 127 ~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~ 206 (462)
+.|+++|+++|+|+++||+.|+++|++|++|++||+|+|.++.... ..+..
T Consensus 161 -~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~---------------------~~~~~------- 211 (416)
T 2wge_A 161 -RAGVMTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIEALP---------------------IAAFS------- 211 (416)
T ss_dssp -CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEECCCCCCHHH---------------------HHHHH-------
T ss_pred -CCCcccccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecCccchHH---------------------HHHHH-------
Confidence 4799999999999999999999999999999999999999865100 00000
Q ss_pred hCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCc
Q 012506 207 FGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTT 286 (462)
Q Consensus 207 ~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~ 286 (462)
..+.+.. +. .+++.. .+| |+.
T Consensus 212 -----------------------~~~~l~~------------~~-------~~~~~~------------~~p-fd~---- 232 (416)
T 2wge_A 212 -----------------------MMRAMST------------RN-------DEPERA------------SRP-FDK---- 232 (416)
T ss_dssp -----------------------TTTCBCC------------CT-------TSGGGS------------CCT-TBT----
T ss_pred -----------------------hcchhhc------------cc-------cCCccc------------ccc-ccc----
Confidence 0001100 00 001111 223 432
Q ss_pred ccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEec-----cCCCCCCccHHHHHHHHHHHcCCCCCCccEEEec
Q 012506 287 TAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEIN 361 (462)
Q Consensus 287 t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~-----~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eih 361 (462)
..++...+||++++||++++.|+++|.+++++|.|++... ..|+.++.++..+++++|+++||+++|||+||+|
T Consensus 233 -~~dg~v~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve~H 311 (416)
T 2wge_A 233 -DRDGFVFGEAGALMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTRSLELAGLSPADIDHVNAH 311 (416)
T ss_dssp -TCCCBCBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECC
T ss_pred -CCCCccccCceEEEEECcHHHHHHCCCceEEEEEEEEEecCCCCccCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEEC
Confidence 2345568999999999999999999999999999998865 4566666778899999999999999999999999
Q ss_pred CCCHHH----HHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcC-----------------------
Q 012506 362 EAFASQ----FVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG----------------------- 414 (462)
Q Consensus 362 dafa~~----~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~----------------------- 414 (462)
++++.. +...++.+|. .++++++++..+|||+||+|+.++++++++|+++.
T Consensus 312 gtgT~~gD~~E~~al~~~~~--~~~~v~s~k~~~GH~~gAsG~~~~i~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~~~~ 389 (416)
T 2wge_A 312 GTATPIGDAAEANAIRVAGC--DQAAVYAPKSALGHSIGAVGALESVLTVLTLRDGVIPPTLNYETPDPEIDLDVVAGEP 389 (416)
T ss_dssp CCCCHHHHHHHHHHHHHTTC--TTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCCSBCTTTCCEECCSSC
T ss_pred CCCCcCCCHHHHHHHHHhcc--CCCCccCCcccccCcHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCcccCCCCC
Confidence 999975 6666677753 26788888889999999999999999999999853
Q ss_pred --CCCcEEEEEeecccceeEEEEEEe
Q 012506 415 --RDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 415 --~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
.+.++++++..+.||.+.++||++
T Consensus 390 ~~~~~~~a~~~sfGfGG~na~~vl~~ 415 (416)
T 2wge_A 390 RYGDYRYAVNNSFGFGGHNVALAFGR 415 (416)
T ss_dssp EECCCCEEEEEEEETTTEEEEEEEEC
T ss_pred ccCCCCEEEEeCcccCceeEEEEEEe
Confidence 124788998887788888999875
|
| >2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-30 Score=269.36 Aligned_cols=274 Identities=18% Similarity=0.248 Sum_probs=210.6
Q ss_pred HHHHHHHHHHHHHHHcCCCccccC----cEEEEeccCCCC-------------------------ccccHHHHHHHHcCC
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS-------------------------QRASECRMAAFYAGF 125 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id----~vivG~~~~~~~-------------------------~~~~~a~~~a~~~Gl 125 (462)
..+|+.+++++||+++|+++++|| +|++|+..++.. .....+..++..+|+
T Consensus 98 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl 177 (437)
T 2gqd_A 98 FTQYAIVAAREAVKDAQLDINENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGA 177 (437)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCcceEEEEeecCCcHHHHHHHHHHHHhcCcccCChHHhhhcchhHHHHHHHHHhCC
Confidence 457999999999999999999999 999998765410 012467889999999
Q ss_pred CCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHH
Q 012506 126 PETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAH 205 (462)
Q Consensus 126 p~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~ 205 (462)
+.|+++|+++|+|+++||..|+++|++|++|++||+|+|.+... +..
T Consensus 178 --~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~------------------------~~~------- 224 (437)
T 2gqd_A 178 --KGPNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITH------------------------MAI------- 224 (437)
T ss_dssp --CSSEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSH------------------------HHH-------
T ss_pred --CCceEEecCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCH------------------------HHH-------
Confidence 46999999999999999999999999999999999999986440 000
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCC
Q 012506 206 RFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGT 285 (462)
Q Consensus 206 ~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~ 285 (462)
..| . ..+.+.. ..+|. . ..+| |+.
T Consensus 225 ---------~~~-----~------~~~~ls~--------~~~p~------------~------------~~~p-fd~--- 248 (437)
T 2gqd_A 225 ---------AGF-----S------ASRALST--------NDDIE------------T------------ACRP-FQE--- 248 (437)
T ss_dssp ---------HHH-----H------HTTCBCC--------CCCTT------------T------------SSCT-TCT---
T ss_pred ---------HHH-----H------hccCccC--------CCCCc------------c------------ccCC-CCC---
Confidence 000 0 0011100 00111 1 1234 543
Q ss_pred cccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccC-----CCCCCccHHHHHHHHHHHcCCCCCCccEEEe
Q 012506 286 TTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVD-----PAIMGVGPAVAIPAAVKSAGLQLDDIDLFEI 360 (462)
Q Consensus 286 ~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~-----p~~~~~~~~~Ai~~aL~~AGl~~~DID~~ei 360 (462)
..+...++|||+++||++.+.|+++|.+++++|.|++..... |+..+.+...+++++|+++||+++|||+||+
T Consensus 249 --~~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~Al~~Agl~p~dId~ve~ 326 (437)
T 2gqd_A 249 --GRDGFVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNA 326 (437)
T ss_dssp --TCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGGCCEEEC
T ss_pred --CCCCceeeceEEEEEECcHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhhCCEEEE
Confidence 234556899999999999999999999999999999987643 3334455678999999999999999999999
Q ss_pred cCCCHHH----HHHH-HHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC--------------------
Q 012506 361 NEAFASQ----FVYC-RNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR-------------------- 415 (462)
Q Consensus 361 hdafa~~----~~~~-~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~-------------------- 415 (462)
|++++.. +... .+.+|...+++++++.+..+|||+||+|+.++++++++|+++.-
T Consensus 327 HgtgT~~~D~~E~~al~~~fg~~~~~~~v~s~k~~~GH~~gAaG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~~ 406 (437)
T 2gqd_A 327 HGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDIVPN 406 (437)
T ss_dssp CCCSCHHHHHHHHHHHHHHHGGGGTSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCCSCCSSCCSBCCBS
T ss_pred ECCCCcCcCHHHHHHHHHHHhccCCCceeecchhhhcCChhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcccCCC
Confidence 9999974 3333 34567655678887777779999999999999999999998530
Q ss_pred -----CCcEEEEEeecccceeEEEEEEec
Q 012506 416 -----DCRFGVISMCIGTGMGAAAVFERG 439 (462)
Q Consensus 416 -----~~~~gl~~~~~G~G~g~A~v~~~~ 439 (462)
+.++++++.++.||.+.++||++.
T Consensus 407 ~~~~~~~~~a~~~sfGfGG~na~~vl~~~ 435 (437)
T 2gqd_A 407 EAQDLDITYAMSNSLGFGGHNAVLVFKKF 435 (437)
T ss_dssp SCEECCCSEEEEEEECGGGEEEEEEEECC
T ss_pred ccccCCCCEEEEccCcCCCeeEEEEEEec
Confidence 247899988877888899999864
|
| >2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.2e-30 Score=268.96 Aligned_cols=273 Identities=19% Similarity=0.232 Sum_probs=209.0
Q ss_pred HHHHHHHHHHHHHHHcCCCc-cccC----cEEEEeccCCCC-------------------------ccccHHHHHHHHcC
Q 012506 75 PDDLLAPVLKAVIEKTNVDP-SEVG----DIVVGTVLAPGS-------------------------QRASECRMAAFYAG 124 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~-~~Id----~vivG~~~~~~~-------------------------~~~~~a~~~a~~~G 124 (462)
..+|+.+++++||+++|+++ ++|| +|++|+..++.. .....+..++..+|
T Consensus 97 ~~~l~l~aa~~AL~dAGl~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lg 176 (438)
T 2iwz_A 97 PTIMAIGAAELAMKDSGWHPQSEADQVATGVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRYK 176 (438)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEEESCCCHHHHHHHHHHHHHHCGGGSCTTHHHHTCTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCCcccccCcceEEEEecccCcHHHHHHHHHHHHhcCCcccChhhhhhhhhhHHHHHHHHHhC
Confidence 46799999999999999998 8888 599998765420 01246888999999
Q ss_pred CCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHH
Q 012506 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVA 204 (462)
Q Consensus 125 lp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~ 204 (462)
+ +.|+++|+++|+|+++||..|+++|++|++|++||+|+|.+.. |. ...+
T Consensus 177 l--~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-p~--------------------~~~~------- 226 (438)
T 2iwz_A 177 L--KGPNHAVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCIS-PL--------------------SLAG------- 226 (438)
T ss_dssp C--CSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS-HH--------------------HHHH-------
T ss_pred C--CCceeeecCchhHHHHHHHHHHHHHHcCCCCEEEEEeeehhcC-HH--------------------HHHH-------
Confidence 9 4699999999999999999999999999999999999998643 00 0000
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCC
Q 012506 205 HRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDG 284 (462)
Q Consensus 205 ~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g 284 (462)
| . ..+.+... .+| +. ..+| |+.
T Consensus 227 ------------~-----~------~~~~ls~~--------~~p------------~~------------~~~p-fd~-- 248 (438)
T 2iwz_A 227 ------------F-----S------RARALSTN--------SDP------------KL------------ACRP-FHP-- 248 (438)
T ss_dssp ------------H-----H------HTTCBCCC--------SCT------------TT------------SCCT-TCT--
T ss_pred ------------H-----H------hcCCcCCC--------CCC------------Cc------------cccc-CCC--
Confidence 0 0 00111100 011 11 1234 543
Q ss_pred CcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccC-----CCCCCccHHHHHHHHHHHcCCCCCCccEEE
Q 012506 285 TTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVD-----PAIMGVGPAVAIPAAVKSAGLQLDDIDLFE 359 (462)
Q Consensus 285 ~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~-----p~~~~~~~~~Ai~~aL~~AGl~~~DID~~e 359 (462)
..+...++|||+++||++.+.|+++|.+++++|.|++..... |+..+.+...+++++|+++||+++|||++|
T Consensus 249 ---~~~G~~~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~t~p~~~~~~~~~ai~~Al~~Agl~p~dId~ve 325 (438)
T 2iwz_A 249 ---KRDGFVMGEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAAALKDAGVQPEEISYIN 325 (438)
T ss_dssp ---TCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEE
T ss_pred ---CCCCEEeeceEEEEEeccHHHHHhCCCceEEEEecceecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEE
Confidence 123456899999999999999999999999999999987643 444556678899999999999999999999
Q ss_pred ecCCCHHH----HHHHH-HHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcC--------------------
Q 012506 360 INEAFASQ----FVYCR-NKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG-------------------- 414 (462)
Q Consensus 360 ihdafa~~----~~~~~-e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~-------------------- 414 (462)
+|++++.. +...+ +.+|....++++++.+..+|||+||+|+.++++++++|+++.
T Consensus 326 ~HgtgT~~gD~~E~~al~~~fg~~~~~~~v~s~K~~~GH~~gAaG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~ 405 (438)
T 2iwz_A 326 AHATSTPLGDAAENKAIKHLFKDHAYALAVSSTKGATGHLLGAAGAVEAAFTTLACYYQKLPPTLNLDCSEPEFDLNYVP 405 (438)
T ss_dssp CCCCSCHHHHHHHHHHHHHHHGGGGGTSEEECCHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSCCCTTCCSBCCB
T ss_pred ecCCCCcccCHHHHHHHHHHHhccCCCcceecchhhhcCCHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCccccC
Confidence 99999874 33333 346655567787777777899999999999999999999853
Q ss_pred --C---C---CcEEEEEeecccceeEEEEEEe
Q 012506 415 --R---D---CRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 415 --~---~---~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
. . .++++++.+..||.+.++||++
T Consensus 406 ~~~~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 437 (438)
T 2iwz_A 406 LKAQEWKTEKRFIGLTNSFGFGGTNATLCIAG 437 (438)
T ss_dssp SSCEECCCSSSCEEEEEEEETTTEEEEEEEEC
T ss_pred CCcccCCCCCccEEEEecCcCCCeeEEEEEee
Confidence 0 1 5789998888888999999875
|
| >2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-30 Score=271.00 Aligned_cols=276 Identities=17% Similarity=0.219 Sum_probs=208.9
Q ss_pred CHHHHHHHHHHHHHHHcCC-CccccC----cEEEEeccCCCC-----------c--------------cccHHHHHHHHc
Q 012506 74 YPDDLLAPVLKAVIEKTNV-DPSEVG----DIVVGTVLAPGS-----------Q--------------RASECRMAAFYA 123 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl-~~~~Id----~vivG~~~~~~~-----------~--------------~~~~a~~~a~~~ 123 (462)
...+|+.+++++||+++|+ ++++|| ++++|+..+... . ....+..++..+
T Consensus 87 ~~~~l~l~aa~~AL~dAG~~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~l 166 (431)
T 2ix4_A 87 NFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKY 166 (431)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCccccCCCCEEEEEeeccccHHHHHHHHHHHHhcCcccCChhhhhcchhHHHHHHHHHHH
Confidence 4578999999999999999 999998 699998654310 0 124678899999
Q ss_pred CCCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHH
Q 012506 124 GFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENV 203 (462)
Q Consensus 124 Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~ 203 (462)
|+ +.|+++|+++|+|+++||+.|+++|++|++|++||+|+|.++.... ..+
T Consensus 167 gl--~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~---------------------~~~------ 217 (431)
T 2ix4_A 167 GF--QGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALS---------------------VAG------ 217 (431)
T ss_dssp TC--CSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHH---------------------HHH------
T ss_pred CC--CCceeCccChhHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHH---------------------HHH------
Confidence 99 4699999999999999999999999999999999999999865100 000
Q ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCC
Q 012506 204 AHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKD 283 (462)
Q Consensus 204 ~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~ 283 (462)
| .+ .+.+. ++.+ .++++. .+| |+.
T Consensus 218 -------------~-----~~------~~~ls------------~~~~------~~~~~~------------~~p-fd~- 241 (431)
T 2ix4_A 218 -------------F-----SR------SRALS------------TKFN------SSPQEA------------SRP-FDC- 241 (431)
T ss_dssp -------------H-----HH------TTCBC------------CTTT------TCGGGS------------CCT-TBT-
T ss_pred -------------H-----Hh------ccccC------------cccc------CCcccc------------ccc-CCC-
Confidence 0 00 00100 0000 011221 223 332
Q ss_pred CCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEec-----cCCCCCCccHHHHHHHHHHHcCCCCCCccEE
Q 012506 284 GTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDDIDLF 358 (462)
Q Consensus 284 g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~-----~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~ 358 (462)
..+.+.++|||+++||++++.|+++|.+++++|.|++... ..|...+.+...+++++|+++||+++|||++
T Consensus 242 ----~~~g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~v 317 (431)
T 2ix4_A 242 ----DRDGFVIGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYV 317 (431)
T ss_dssp ----TCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEE
T ss_pred ----CCCCceeecceEEEEEccHHHHHhCCCceEEEEeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEE
Confidence 2345568999999999999999999999999999999876 4555556677889999999999999999999
Q ss_pred EecCCCHHH----HHHHH-HHcCCC--CCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcC--------------C--
Q 012506 359 EINEAFASQ----FVYCR-NKLGLD--PEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG--------------R-- 415 (462)
Q Consensus 359 eihdafa~~----~~~~~-e~LGl~--~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~--------------~-- 415 (462)
|+|++++.. +...+ +.++.. ..++++++++..+|||+||+|+.++++++++|+++. .
T Consensus 318 e~HgtgT~~~D~~E~~al~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~~~ 397 (431)
T 2ix4_A 318 NAHATSTPIGDAVEARAIKTVFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPIFDKR 397 (431)
T ss_dssp ECCCCSCHHHHHHHHHHHHHHHTHHHHTSCSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCTTCCSS
T ss_pred EEeCCcCcccCHHHHHHHHHHHcccccCCCceeecchhhhcccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCcc
Confidence 999998863 33333 233322 256788888889999999999999999999999863 0
Q ss_pred ----------CCcEEEEEeecccceeEEEEEEe
Q 012506 416 ----------DCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 416 ----------~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
+.++++++.++.||.+.++||++
T Consensus 398 ~v~~~~~~~~~~~~a~~~sfGfGG~na~~il~~ 430 (431)
T 2ix4_A 398 FMPLTTSKKMLVRTAMSNSFGFGGTNASLLFAS 430 (431)
T ss_dssp SCCCSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred cCCccccccCCCCEEEEecccCCCeeEEEEEee
Confidence 24789998888888889999875
|
| >4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-29 Score=265.78 Aligned_cols=275 Identities=17% Similarity=0.224 Sum_probs=206.7
Q ss_pred HHHHHHHHHHHHHHHcCCCcccc-C----cEEEEeccCCC-------------------------CccccHHHHHHHHcC
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEV-G----DIVVGTVLAPG-------------------------SQRASECRMAAFYAG 124 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~I-d----~vivG~~~~~~-------------------------~~~~~~a~~~a~~~G 124 (462)
..+|+.+|+++||+++|+++++| | ++++|+..+.. ...+..+..++..+|
T Consensus 102 ~~~L~l~Aa~~AL~dAGl~~~~i~d~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 181 (451)
T 4ddo_A 102 FIQMAMVAADEALAEAGWAPEAEQQRERTATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPFFLSNLAAGQISIKHR 181 (451)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCSHHHHTTEEEEEECSSCSHHHHHHHHHHHHHTCGGGCCTTHHHHHCTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCChhhcccccceEEEEeecCCchHHHHHHHHHHHhcCccccCcchhhccccchHHHHHHHHhc
Confidence 45799999999999999999999 7 68888764321 001235678999999
Q ss_pred CCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHH
Q 012506 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVA 204 (462)
Q Consensus 125 lp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~ 204 (462)
+ +.|+++|+++|+|+++||..|+++|++|++|++||+|+|.++... .+...+
T Consensus 182 l--~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~vLvgG~e~~~~~~----------------------~~~~~~---- 233 (451)
T 4ddo_A 182 F--RGPLGCPVTACAASVQAIGDAMRMIRTGEADVVLAGGAEAAFDKV----------------------SLGGFA---- 233 (451)
T ss_dssp C--CSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHH----------------------HHHHHH----
T ss_pred C--CCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeccccccCHH----------------------HHHHHH----
Confidence 9 469999999999999999999999999999999999999976510 000000
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCC
Q 012506 205 HRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDG 284 (462)
Q Consensus 205 ~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g 284 (462)
+..+...+ |.+ +.....+| |+.
T Consensus 234 --------------------~~~~ls~~-~~~----------------------------------~~~~~~~p-fd~-- 255 (451)
T 4ddo_A 234 --------------------AARALSTG-FSE----------------------------------EPVRASRP-FDR-- 255 (451)
T ss_dssp --------------------HTTCBCCS-CTT----------------------------------SGGGSCCT-TBT--
T ss_pred --------------------HHhhhccC-CCc----------------------------------Cccccccc-ccc--
Confidence 00000000 110 11112334 432
Q ss_pred CcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCC------CccHHHHHHHHHHHcCCCCCCccEE
Q 012506 285 TTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIM------GVGPAVAIPAAVKSAGLQLDDIDLF 358 (462)
Q Consensus 285 ~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~------~~~~~~Ai~~aL~~AGl~~~DID~~ 358 (462)
..+++.++|||+++||++++.|++++.+|+++|.|++... ++..+ +.+...+++++|+++||+++|||+|
T Consensus 256 ---~~~g~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~-d~~~~~~~~~~~~~~~~ai~~al~~Agl~~~dId~v 331 (451)
T 4ddo_A 256 ---DRDGFVMGEGAAMVVVESLDHALARGARPIAEIIGYGTTA-DAYHMTAGPDDGSGAMRAMKLALRMGDVAPEQVDYV 331 (451)
T ss_dssp ---TCCSBCBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEE-CCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEE
T ss_pred ---CCCCcEEeceEEEEEEeeHHHHHhCCCceEEEEEEEEEec-CCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEE
Confidence 2244558999999999999999999999999999998876 33322 2245789999999999999999999
Q ss_pred EecCCCHHH----HHHHH-HHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcC-------------------
Q 012506 359 EINEAFASQ----FVYCR-NKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG------------------- 414 (462)
Q Consensus 359 eihdafa~~----~~~~~-e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~------------------- 414 (462)
|+|++++.. +...+ +.+|. ..++++++.+..+|||+||+|++++++++++|+++.
T Consensus 332 e~Hgtgt~~~d~~E~~al~~~~~~-~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~~~~~ 410 (451)
T 4ddo_A 332 NAHATSTPVGDAGEIEALKTVFGV-GAGPAISSTKSATGHLLGAAGAIEAAFSILALRDGVLPGTLNLEHPDPAADGLDL 410 (451)
T ss_dssp ECCCCSCHHHHHHHHHHHHHHHCS-SSSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCGGGTTSEE
T ss_pred EecCCcCcccCHHHHHHHHHHhCC-CCCCcccCchhhhccCHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCcccccccc
Confidence 999999973 33333 34565 446677777888999999999999999999999751
Q ss_pred -------CCCcEEEEEeecccceeEEEEEEecc
Q 012506 415 -------RDCRFGVISMCIGTGMGAAAVFERGD 440 (462)
Q Consensus 415 -------~~~~~gl~~~~~G~G~g~A~v~~~~~ 440 (462)
.+.++++++.++.||.+.++||++..
T Consensus 411 ~~~~~~~~~~~~a~~~sfgfgG~na~~vl~~~~ 443 (451)
T 4ddo_A 411 IGPAARHVPVEIALSNGFGFGGVNASVLFRRYP 443 (451)
T ss_dssp CCSSCEECCCSEEEEEEEETTTEEEEEEEEESC
T ss_pred cCCCCCCCCcCEEEEeeEcCCCceEEEEEeeCC
Confidence 02478999988888999999999754
|
| >2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-29 Score=263.30 Aligned_cols=271 Identities=21% Similarity=0.241 Sum_probs=201.0
Q ss_pred HHHHHHHHHHHHHHcCCC---ccccCcEEEEeccCCCC-----------c--------------cccHHHHHHHHcCCCC
Q 012506 76 DDLLAPVLKAVIEKTNVD---PSEVGDIVVGTVLAPGS-----------Q--------------RASECRMAAFYAGFPE 127 (462)
Q Consensus 76 ~eL~~~A~~~Al~~agl~---~~~Id~vivG~~~~~~~-----------~--------------~~~~a~~~a~~~Glp~ 127 (462)
.+|+.+++++||+++|++ +++| ++++|+..++.. . ....+..++..+|+
T Consensus 100 ~~l~l~aa~~ALedAG~~~~~~~~i-gv~vgt~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~lgl-- 176 (434)
T 2gp6_A 100 QRMSTVLSRRLWENAGSPEVDTNRL-MVSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPNGAAAAVGLERHA-- 176 (434)
T ss_dssp HHHHHHHHHHHHHHTTCCCCCTTSE-EEEEECSSCSCHHHHHHHHHHTTSCSSSSCTTHHHHHSTTHHHHHHHHHSCC--
T ss_pred HHHHHHHHHHHHHhcCCCccCCCce-EEEEccccccHHHHHHHHHHHHhcCccccChhhhhccchhhHHHHHhhhhcC--
Confidence 679999999999999983 3333 588887755431 0 01357788999999
Q ss_pred CcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHh
Q 012506 128 TVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRF 207 (462)
Q Consensus 128 ~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~ 207 (462)
++|+++|+++|+|+++||..|+++|++|++|++||+|+|.++... .
T Consensus 177 ~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~----------------------~------------ 222 (434)
T 2gp6_A 177 KAGVMTPVSACASGAEAIARAWQQIVLGEADAAICGGVETRIEAV----------------------P------------ 222 (434)
T ss_dssp CSCEECEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEECCCCCHH----------------------H------------
T ss_pred CCCeEEeCCCCcHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHH----------------------H------------
Confidence 479999999999999999999999999999999999999986510 0
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcc
Q 012506 208 GVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTT 287 (462)
Q Consensus 208 gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t 287 (462)
++..++.++ .+.. +..+| ++. .+| |+.
T Consensus 223 ---------~~~~~~~~~-------~ls~-------~~~~p------------~~~------------~~p-fd~----- 249 (434)
T 2gp6_A 223 ---------IAGFAQMRI-------VMST-------NNDDP------------AGA------------CRP-FDR----- 249 (434)
T ss_dssp ---------HHHHHTTTS-------SCCC-------CTTCT------------TTS------------CCS-SBT-----
T ss_pred ---------HHHHHHHHH-------HhcC-------CCCCC------------CCc------------eec-ccc-----
Confidence 000000000 0000 00011 111 223 332
Q ss_pred cCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEec-----cCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecC
Q 012506 288 AGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINE 362 (462)
Q Consensus 288 ~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~-----~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eihd 362 (462)
..+...++|||+++||++.+.|+++|.+++++|.|++... ..|+..+.+...+++++|+++||+++|||+||+|.
T Consensus 250 ~~~g~v~gdGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~Dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hg 329 (434)
T 2gp6_A 250 DRDGFVFGEGGALLLIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAITRAIQLAGLAPGDIDHVNAHA 329 (434)
T ss_dssp TCCCCCBBCCEEEEEEEEHHHHHTTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHTTCCTTTEEEEECCC
T ss_pred cCCCcceecceEEEEeCcHHHHHHCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHcCEEEEeC
Confidence 1244558999999999999999999999999999998875 34555556778899999999999999999999995
Q ss_pred CCHHH----HHHHH-HHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC----------------------
Q 012506 363 AFASQ----FVYCR-NKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR---------------------- 415 (462)
Q Consensus 363 afa~~----~~~~~-e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~---------------------- 415 (462)
..+.. +...+ +.+| .+++|++|++..+|||+||+|+.++++++++|+++.-
T Consensus 330 tgt~~~D~~E~~al~~~fg--~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~~~~ 407 (434)
T 2gp6_A 330 TGTQVGDLAEGRAINNALG--GNRPAVYAPKSALGHSVGAVGAVESILTVLALRDQVIPPTLNLVNLDPEIDLDVVAGEP 407 (434)
T ss_dssp CSCHHHHHHHHHHHHHHHT--TCCCEECCTHHHHCBCTTTHHHHHHHHHHHHHHHSCCCCCSSCSSBCTTCCCEECCSSC
T ss_pred CcCccchHHHHHHHHHHhc--cCCCCcccchhhhcCchhhhHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCccccCCCc
Confidence 55432 22222 2333 3379999999999999999999999999999998631
Q ss_pred ---CCcEEEEEeecccceeEEEEEEe
Q 012506 416 ---DCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 416 ---~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
+.++++++.++.||.+.++||++
T Consensus 408 ~~~~~~~a~~~sfGfGG~na~~vl~~ 433 (434)
T 2gp6_A 408 RPGNYRYAINNSFGFGGHNVAIAFGR 433 (434)
T ss_dssp CCSCCCEEEEEEEETTTEEEEEEEEC
T ss_pred cCCCCCEEEEeCCcCCCeeEEEEEEe
Confidence 24789999888888999999875
|
| >1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-29 Score=260.93 Aligned_cols=272 Identities=18% Similarity=0.186 Sum_probs=203.4
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccC----cEEEEeccCCCC-------------------------ccccHHHHHHHHcC
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS-------------------------QRASECRMAAFYAG 124 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~~Id----~vivG~~~~~~~-------------------------~~~~~a~~~a~~~G 124 (462)
...+|+.+++++||+++|+++++|| ++++|+..++.. .....+..++..+|
T Consensus 78 ~~~~l~l~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 157 (415)
T 1tqy_B 78 PSTRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHG 157 (415)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCccHHHHHHHHHHHHhcCcccCChhhhhcccchHHHHHHHHHhC
Confidence 4578999999999999999999999 789987754320 02356889999999
Q ss_pred CCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHH
Q 012506 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVA 204 (462)
Q Consensus 125 lp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~ 204 (462)
+ +.|+++|+++|+|+++||+.|+++|++| +|++||+|+|.+... ..+.
T Consensus 158 l--~gp~~~v~~aCsS~l~Al~~A~~~I~~G-~d~~LvgG~e~~~~~----------------------~~~~------- 205 (415)
T 1tqy_B 158 M--RGPSSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDP----------------------WGWV------- 205 (415)
T ss_dssp C--CSSCEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCSH----------------------HHHH-------
T ss_pred C--CCceEeecCCccHHHHHHHHHHHHHHcC-CCEEEEeeecCcCCH----------------------HHHH-------
Confidence 9 4699999999999999999999999999 999999999995320 0000
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCC
Q 012506 205 HRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDG 284 (462)
Q Consensus 205 ~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g 284 (462)
.+.+ .+.+. .|. ++++.+ +| |+.
T Consensus 206 ----------------~~~~------~~~ls----------~~~----------~~~~~~------------~p-fd~-- 228 (415)
T 1tqy_B 206 ----------------SQIA------SGRIS----------TAT----------DPDRAY------------LP-FDE-- 228 (415)
T ss_dssp ----------------HHHT------TSCBC----------CCS----------CGGGSC------------CT-TST--
T ss_pred ----------------HHHh------ccCcc----------CCC----------CCCCCc------------CC-CCC--
Confidence 0000 00000 000 012222 33 433
Q ss_pred CcccCCCCCcCCcceEEEEeCHHHHHhcCC-CceEEEEEEEEeccCCCCCCc--cHHHHHHHHHHHcCCCCCCccEEEec
Q 012506 285 TTTAGNSSQVSDGAGAVLLMKRSVAMRKGL-PILGVFRTFAAVGVDPAIMGV--GPAVAIPAAVKSAGLQLDDIDLFEIN 361 (462)
Q Consensus 285 ~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~-~~~~~i~g~~~~~~~p~~~~~--~~~~Ai~~aL~~AGl~~~DID~~eih 361 (462)
..+.+.++|||+++||++.+.|+++|. +++++|.|++........... +...+++++|+++||+++|||++|+|
T Consensus 229 ---~~~G~~~geGaaavvL~~~~~A~~~g~~~i~a~I~g~~~~~dg~~~~~p~~~~~~ai~~al~~Agl~~~dId~ve~H 305 (415)
T 1tqy_B 229 ---RAAGYVPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGSGRPAGLERAIRLALNDAGTGPEDVDVVFAD 305 (415)
T ss_dssp ---TCCCBCBBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTCCCCCSHHHHHHHHHHHHTCCGGGCCEEECC
T ss_pred ---CCCCcceeeeEEEEEECcHHHHHHCCCCceEEEEEEEEEccCCCCCCCCCHHHHHHHHHHHHHcCCCHhHCCEEEEe
Confidence 235566899999999999999999999 999999999987542221111 77889999999999999999999999
Q ss_pred CCCHH----HHHHHHHH-cCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcC----------------------
Q 012506 362 EAFAS----QFVYCRNK-LGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG---------------------- 414 (462)
Q Consensus 362 dafa~----~~~~~~e~-LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~---------------------- 414 (462)
++++. .+...++. +|-.+ +.++.-+..+|||+||+|+.+++.++++|+++.
T Consensus 306 gtgt~~~D~~E~~al~~~~g~~~--~~v~s~K~~~GH~~gAaG~~~~~~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~~~ 383 (415)
T 1tqy_B 306 GAGVPELDAAEARAIGRVFGREG--VPVTVPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTSVPREYGIDLVLGE 383 (415)
T ss_dssp CCCSHHHHHHHHHHHHHHHCTTC--SEEECGGGGTCBCGGGHHHHHHHHHHHHHHHTSBCCBCSCCCCCGGGCCEECBSS
T ss_pred CCCCcCcCHHHHHHHHHHhCCCC--ceEeccchhhccChHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccCCC
Confidence 99985 45555554 44333 334334444899999999999999999999852
Q ss_pred ---CCCcEEEEEeecccceeEEEEEEec
Q 012506 415 ---RDCRFGVISMCIGTGMGAAAVFERG 439 (462)
Q Consensus 415 ---~~~~~gl~~~~~G~G~g~A~v~~~~ 439 (462)
.+.++++++.++.||.+.++||++.
T Consensus 384 ~~~~~~~~a~~~sfGfgG~n~~~vl~~~ 411 (415)
T 1tqy_B 384 PRSTAPRTALVLARGRWGFNSAAVLRRF 411 (415)
T ss_dssp CBCCCCSEEEEEEEETTTEEEEEEEEEC
T ss_pred CccCCCCEEEEecCcCCCeEEEEEEecC
Confidence 0347899998888889999999874
|
| >1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-29 Score=262.23 Aligned_cols=270 Identities=19% Similarity=0.244 Sum_probs=205.2
Q ss_pred HHHHHHHHHHHHHHcCCCccccC----cEEEEeccCCCC-----------c--------------cccHHHHHHHHcCCC
Q 012506 76 DDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS-----------Q--------------RASECRMAAFYAGFP 126 (462)
Q Consensus 76 ~eL~~~A~~~Al~~agl~~~~Id----~vivG~~~~~~~-----------~--------------~~~~a~~~a~~~Glp 126 (462)
.+|+.+++++||+++|+++++|| ++++|+..++.. + ....+..++..+|+
T Consensus 94 ~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl- 172 (430)
T 1ox0_A 94 SLYALYAAQEAVNHANLDVEALNRDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGA- 172 (430)
T ss_dssp HHHHHHHHHHHHHHTTCCTTTSCGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHcCCChhhcCccceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhccchhHHHHHHHHHhcC-
Confidence 47999999999999999999999 588887654310 0 01357788999999
Q ss_pred CCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHH
Q 012506 127 ETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHR 206 (462)
Q Consensus 127 ~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~ 206 (462)
+.|+++|+++|+|+++||..|+++|++|++|++||+|+|.+... +..
T Consensus 173 -~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p------------------------~~~-------- 219 (430)
T 1ox0_A 173 -NGVCKSINTACSSSNDAIGDAFRSIKFGFQDVMLVGGTEASITP------------------------FAI-------- 219 (430)
T ss_dssp -CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSH------------------------HHH--------
T ss_pred -CCceEeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCH------------------------HHH--------
Confidence 46999999999999999999999999999999999999986430 000
Q ss_pred hCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCc
Q 012506 207 FGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTT 286 (462)
Q Consensus 207 ~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~ 286 (462)
.. +. ..+.+ +.++.++. ..+| |+.
T Consensus 220 --------~~-----~~------~~~~l------------------------s~~~~p~~--------~~~p-Fd~---- 243 (430)
T 1ox0_A 220 --------AG-----FQ------ALTAL------------------------STTEDPTR--------ASIP-FDK---- 243 (430)
T ss_dssp --------HH-----HH------HTTCB------------------------CCCSSTTS--------SSCT-TBT----
T ss_pred --------HH-----HH------hCCCc------------------------cCCCCCCC--------CCCC-CCC----
Confidence 00 00 00111 10111110 1233 543
Q ss_pred ccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEecc-----CCCCCCccHHHHHHHHHHHcCCCCCCccEEEec
Q 012506 287 TAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV-----DPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEIN 361 (462)
Q Consensus 287 t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~-----~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eih 361 (462)
..+.+.++|||+++||++.+.|+++|.+++++|.|++.... .|+..+.+...+++++|+++||+++|||+||+|
T Consensus 244 -~~~g~~~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~H 322 (430)
T 1ox0_A 244 -DRNGFVMGEGSGMLVLESLEHAEKRGATILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAH 322 (430)
T ss_dssp -TCCSBCBCCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCCEECC
T ss_pred -CCCCccccceEEEEEECcHHHHHhCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHhCcCHHHcCEEEEe
Confidence 23566799999999999999999999999999999987642 344455677889999999999999999999999
Q ss_pred CCCHHHH----H-HHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcC----------------------
Q 012506 362 EAFASQF----V-YCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG---------------------- 414 (462)
Q Consensus 362 dafa~~~----~-~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~---------------------- 414 (462)
++++... . .+.+.+|- +-+||..+|. +|||+||+|+.++++++++|+++.
T Consensus 323 gtgt~~~D~~E~~al~~~~g~-~~~v~s~k~~--~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~~~ 399 (430)
T 1ox0_A 323 GTSTPANEKGESGAIVAVLGK-EVPVSSTKSF--TGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEVSDYIEANVVYGQ 399 (430)
T ss_dssp CCSCHHHHHHHHHHHHHHHCS-SSEEECTHHH--HCBCGGGHHHHHHHHHHHHHHHTEECCBSSCCSBCTTCCSEECBSS
T ss_pred CCcCcccCHHHHHHHHHHhCC-Cceecccccc--cccchhhHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCCCC
Confidence 9999763 2 23344554 3467777776 799999999999999999999863
Q ss_pred ---CCCcEEEEEeecccceeEEEEEEec
Q 012506 415 ---RDCRFGVISMCIGTGMGAAAVFERG 439 (462)
Q Consensus 415 ---~~~~~gl~~~~~G~G~g~A~v~~~~ 439 (462)
.+.++++++.++.||.+.++||++.
T Consensus 400 ~~~~~~~~a~~~sfGfGG~na~~vl~~~ 427 (430)
T 1ox0_A 400 GLEKEIPYAISNTFGFGGHNAVLAFKRW 427 (430)
T ss_dssp CEECCCSEEEEEEEETTTEEEEEEEECC
T ss_pred CcCCCCCEEEEeCccCCCceEEEEEeec
Confidence 0247899998888888899999864
|
| >1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-29 Score=263.06 Aligned_cols=276 Identities=19% Similarity=0.255 Sum_probs=207.4
Q ss_pred HHHHHHHHHHHHHHHcCCCccccC----cEEEEeccCCCC-------------c-------------ccc-HHH----HH
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS-------------Q-------------RAS-ECR----MA 119 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id----~vivG~~~~~~~-------------~-------------~~~-~a~----~~ 119 (462)
..+|+.+++++||+++|+++++|| +|++|+..++.. . .++ .+. .+
T Consensus 73 ~~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i 152 (424)
T 1tqy_A 73 ASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEV 152 (424)
T ss_dssp HHHHHHHHHHHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCchhcCCCceEEEEEeCCccHHHHHHHHHHHhhhccCccccChhhhcccccccccchhHhHH
Confidence 467999999999999999999999 599998765320 0 011 133 88
Q ss_pred HHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHH
Q 012506 120 AFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVT 199 (462)
Q Consensus 120 a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 199 (462)
+..+|+ +.|+++|+++|+|+++||+.|+++|++|++|++||+|+|.+.. +. . ..+.
T Consensus 153 a~~lgl--~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~---------~-----------~~~~- 208 (424)
T 1tqy_A 153 AWAVGA--EGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPIT-PI---------V-----------VACF- 208 (424)
T ss_dssp HHHHTC--CSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS-HH---------H-----------HHHH-
T ss_pred HHhcCC--CCceEeecCcccHHHHHHHHHHHHHHCCCCCEEEEeeecccCC-HH---------H-----------HHHH-
Confidence 889999 4699999999999999999999999999999999999999743 00 0 0000
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCc
Q 012506 200 SENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPV 279 (462)
Q Consensus 200 a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~ 279 (462)
.. .+.+.. +..|| |+. .+|
T Consensus 209 -----~~------------------------~~~ls~-------~~~~p------------~~~------------~rp- 227 (424)
T 1tqy_A 209 -----DA------------------------IRATTA-------RNDDP------------EHA------------SRP- 227 (424)
T ss_dssp -----HH------------------------TTCBCC-------CCSCG------------GGC------------CCT-
T ss_pred -----Hh------------------------hccccC-------CCCCC------------CCC------------ccC-
Confidence 00 011110 00011 222 233
Q ss_pred ccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEecc-----CCCCCCccHHHHHHHHHHHcCCCCCC
Q 012506 280 FKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV-----DPAIMGVGPAVAIPAAVKSAGLQLDD 354 (462)
Q Consensus 280 f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~-----~p~~~~~~~~~Ai~~aL~~AGl~~~D 354 (462)
|+. ..+...++||++++||++.+.|+++|.+++++|.|++.... .|...+.+...+++++|+++||+++|
T Consensus 228 fd~-----~~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~g~~~~~ai~~al~~agl~~~d 302 (424)
T 1tqy_A 228 FDG-----TRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESRTDATD 302 (424)
T ss_dssp TBT-----TCCCBCEECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHTCCGGG
T ss_pred CCC-----CCCceeeecceeEEEeccHHHHHhCCCcEEEEEeeeEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHH
Confidence 543 23445589999999999999999999999999999988753 24444556688999999999999999
Q ss_pred ccEEEecCCCHHH----HHHHH-HHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC--------------
Q 012506 355 IDLFEINEAFASQ----FVYCR-NKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR-------------- 415 (462)
Q Consensus 355 ID~~eihdafa~~----~~~~~-e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~-------------- 415 (462)
|||+|+|++++.. +...+ +.+|....++++++.+..+|||.||+|+.++++++++|+++.-
T Consensus 303 Id~ve~Hgtgt~~gD~~E~~al~~~f~~~~~~~~v~s~k~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~~p~~~ 382 (424)
T 1tqy_A 303 IDYINAHGSGTRQNDRHETAAYKRALGEHARRTPVSSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTSDPECD 382 (424)
T ss_dssp CCEEECCCCCCHHHHHHHHHHHHHHTGGGGGGSCEECTHHHHCBCTTTHHHHHHHHHHHHHHHCEECCBTTCCSBBTTBC
T ss_pred CCEEEecCccCcCcCHHHHHHHHHHhcccCCCCeeeccccccccChhhhHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCC
Confidence 9999999999874 44333 4455544566776666678999999999999999999998620
Q ss_pred -----------CCcEEEEEeecccceeEEEEEEecc
Q 012506 416 -----------DCRFGVISMCIGTGMGAAAVFERGD 440 (462)
Q Consensus 416 -----------~~~~gl~~~~~G~G~g~A~v~~~~~ 440 (462)
+.++++++.++.||.+.++||++..
T Consensus 383 ~~~v~~~~~~~~~~~a~~~sfG~GG~n~~~vl~~~~ 418 (424)
T 1tqy_A 383 LDYVPLEARERKLRSVLTVGSGFGGFQSAMVLRDAE 418 (424)
T ss_dssp SCCCBSSCEECCCSEEEEEEEETTTEEEEEEEECHH
T ss_pred cccCCCcccCCCCCEEEEccccCCceEEEEEEccCC
Confidence 2488999988888888999998743
|
| >4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.2e-30 Score=264.82 Aligned_cols=271 Identities=15% Similarity=0.170 Sum_probs=202.9
Q ss_pred HHHHHHHHHHHHHHHcCC-CccccC----cEEEEeccCCC-------------------------CccccHHHHHHHHcC
Q 012506 75 PDDLLAPVLKAVIEKTNV-DPSEVG----DIVVGTVLAPG-------------------------SQRASECRMAAFYAG 124 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl-~~~~Id----~vivG~~~~~~-------------------------~~~~~~a~~~a~~~G 124 (462)
..+|+.+++++||+++|+ ++++|| ++++|+..+.. ......+..++..+|
T Consensus 77 ~~~l~l~aa~~Al~dAGl~~~~~i~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 156 (412)
T 4ewg_A 77 VSMYAVRASELALADAGFAGDESISDGRMGVAYGSSSGSVEPIRAFGTMLESGSMTDVTSNSYVQMMPHTTAVNVSLFWD 156 (412)
T ss_dssp HHHHHHHHHHHHHHHHTCTTCGGGGTTTEEEEEECSCCCHHHHHHHHHHHHHCCCTTCCTTHHHHHSTTHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhcCCCCccccCccceEEEEeccCCchHHHHHHHHHHHhcCcccCChhhhhhhcccHHHHHHHHHhC
Confidence 467999999999999999 888898 88888765320 001346788999999
Q ss_pred CCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHH
Q 012506 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVA 204 (462)
Q Consensus 125 lp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~ 204 (462)
+ +.|+++|+++|+|+++||+.|+++|++|++|++||+|+|.++.... .
T Consensus 157 l--~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~s~~~~-----------------------~------- 204 (412)
T 4ewg_A 157 L--KGRIVPTSSACASGSQAIGYAYENIAMGKQTLMLAGGAEELSGPAV-----------------------A------- 204 (412)
T ss_dssp C--CSCEEECCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHH-----------------------H-------
T ss_pred C--CCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEeccccCCHHHH-----------------------H-------
Confidence 9 4699999999999999999999999999999999999999764100 0
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCC
Q 012506 205 HRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDG 284 (462)
Q Consensus 205 ~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g 284 (462)
.+.+ .+.+. +.. .++++. .+| |+.
T Consensus 205 ----------------~~~~------~~~l~------------~~~-------~~p~~~------------~rp-fd~-- 228 (412)
T 4ewg_A 205 ----------------VFDT------LYATS------------TRN-------DEPHLT------------PRP-FDA-- 228 (412)
T ss_dssp ----------------HHHT------TTCBC------------CCT-------TCGGGC------------CCT-TBT--
T ss_pred ----------------HHHH------hhccc------------cCC-------CCCCCC------------CCC-CCC--
Confidence 0000 00000 000 011222 233 443
Q ss_pred CcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCC---CCccHHHHHHHHHHHcCCCCCCccEEEec
Q 012506 285 TTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAI---MGVGPAVAIPAAVKSAGLQLDDIDLFEIN 361 (462)
Q Consensus 285 ~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~---~~~~~~~Ai~~aL~~AGl~~~DID~~eih 361 (462)
..+...++|||+++||++++.|+++|.+++++|.|++........ .+.+...+++++|+++||+++||||+|+|
T Consensus 229 ---~~~G~~~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~H 305 (412)
T 4ewg_A 229 ---KRDGLVVGEGAATLVLEEYEHAKARGATIHAEIVGFGCNSDGAHMTQPTASTMARAMQLALEDAKLDANAIAYVNAH 305 (412)
T ss_dssp ---TCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSSCCHHHHHHHHHHHHHHTTCCGGGEEEEECC
T ss_pred ---CCCCCceECeEEEEEEccHHHHhhCCCcEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEcc
Confidence 234556899999999999999999999999999999987642211 23456789999999999999999999999
Q ss_pred CCCHH----HHHHHHH-HcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcC----------------------
Q 012506 362 EAFAS----QFVYCRN-KLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG---------------------- 414 (462)
Q Consensus 362 dafa~----~~~~~~e-~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~---------------------- 414 (462)
.+.+. .+...++ .+|- +++++..+..+|||+||+|+++++.++++|+++.
T Consensus 306 gtgt~~~D~~E~~al~~~~~~---~~~v~s~K~~~GH~~gAsG~~~~~~~~~~l~~~~ipp~~~~~~~~p~~~~~~~v~~ 382 (412)
T 4ewg_A 306 GTSTDRGDVAESQATARTFGE---RMPISSLKSYVGHTLGACGALEAWWTIEMMKRNWYAPTLNLTEVDPACAPLDYIRG 382 (412)
T ss_dssp CCCCHHHHHHHHHHHHHHHCT---TCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCCSBCTTSCCCEECCS
T ss_pred CCCCccccHHHHHHHHHHcCC---CCeeeCccccccccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCcccccccccC
Confidence 99987 3444443 3442 2445555666899999999999999999999741
Q ss_pred ----CCCcEEEEEeecccceeEEEEEEec
Q 012506 415 ----RDCRFGVISMCIGTGMGAAAVFERG 439 (462)
Q Consensus 415 ----~~~~~gl~~~~~G~G~g~A~v~~~~ 439 (462)
.+.++++++.++.||.+.++||++.
T Consensus 383 ~~~~~~~~~~~~~sfgfGG~na~~vl~~~ 411 (412)
T 4ewg_A 383 EARAIDAEYVMSNNFAFGGINTSLIFRRV 411 (412)
T ss_dssp SCEECCCSEEEEEEEEGGGEEEEEEEECC
T ss_pred cccCCCCCEEEEeeecCCcceEEEEEeeC
Confidence 0237889988888889999999864
|
| >2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-27 Score=247.38 Aligned_cols=269 Identities=14% Similarity=0.193 Sum_probs=200.6
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCc-----EEEEeccCCC------------Cc--------------cccHHHHHHHH
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPSEVGD-----IVVGTVLAPG------------SQ--------------RASECRMAAFY 122 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~~Id~-----vivG~~~~~~------------~~--------------~~~~a~~~a~~ 122 (462)
...+|+.+++++||+++|+++++||. |++|+..+.. .. ....+..++..
T Consensus 70 ~~~~l~l~aa~~Al~dAg~~~~~i~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 149 (406)
T 2vba_A 70 DASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATP 149 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHCCCChhHcCCCCCEEEEEEECCcchHHHHHHHHHHHhccCccccChhhhhhhhhHHHHHHHHHh
Confidence 35789999999999999999999987 9999876542 00 12467888999
Q ss_pred cCCCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHH
Q 012506 123 AGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSEN 202 (462)
Q Consensus 123 ~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~ 202 (462)
+|+ +.|+++|+++|+|+++||+.|++.|++|++|++||+|+|.++.. +.. .
T Consensus 150 lgl--~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvgG~e~~~~~------------------------~~~--~- 200 (406)
T 2vba_A 150 FKI--HGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWE------------------------MAC--E- 200 (406)
T ss_dssp TTC--CSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHH------------------------HHH--H-
T ss_pred ccC--CCceeeeccchhHHHHHHHHHHHHHHcCCCCEEEEeeeccccCh------------------------HHH--H-
Confidence 999 47999999999999999999999999999999999999998641 000 0
Q ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC
Q 012506 203 VAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK 282 (462)
Q Consensus 203 ~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p 282 (462)
..++| .+..+ +.++| +. ..+| |+.
T Consensus 201 -~~~~~------------------------~ls~~------~~~~p------------~~------------~~~p-fd~ 224 (406)
T 2vba_A 201 -FDAMG------------------------ALSTK------YNDTP------------EK------------ASRT-YDA 224 (406)
T ss_dssp -HHHTT------------------------CBCCS------CTTSG------------GG------------SCCT-TBT
T ss_pred -Hhhcc------------------------ccccc------cCCCC------------cc------------ccCc-CcC
Confidence 00111 11000 00011 11 1233 443
Q ss_pred CCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEecc-----CCCCCCccHHHHHHHHHHHcCCCCCCccE
Q 012506 283 DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGV-----DPAIMGVGPAVAIPAAVKSAGLQLDDIDL 357 (462)
Q Consensus 283 ~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~-----~p~~~~~~~~~Ai~~aL~~AGl~~~DID~ 357 (462)
..+...++||++++||++.+.|+++|.+++++|.|++.... .|+ +.+...+++++|+++| +||||
T Consensus 225 -----~~~G~v~gEGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~t~p~--~~~~~~ai~~al~~ag---~dId~ 294 (406)
T 2vba_A 225 -----HRDGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAPS--GEGAVRCMKMAMHGVD---TPIDY 294 (406)
T ss_dssp -----TCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCTTSCC--SHHHHHHHHHHHTTCC---SCCCE
T ss_pred -----CCCceEeeceEEEEEeCcHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCC--HHHHHHHHHHHHhhCC---CCccE
Confidence 12444589999999999999999999999999999998754 233 4567789999999999 99999
Q ss_pred EEecCCCHHH----HHHH-HHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcC--------------C---
Q 012506 358 FEINEAFASQ----FVYC-RNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG--------------R--- 415 (462)
Q Consensus 358 ~eihdafa~~----~~~~-~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~--------------~--- 415 (462)
+|+|++++.. +... .+.+|... +++++-+..+|||+||+|+.+++.++++|+++. .
T Consensus 295 ve~HgtgT~~gD~~E~~al~~~fg~~~--~~v~s~K~~~GH~~gAaG~~~~i~~~l~l~~~~ipp~~~~~~~~~~~~~~~ 372 (406)
T 2vba_A 295 LNSHGTSTPVGDVKELAAIREVFGDKS--PAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLN 372 (406)
T ss_dssp EECCCCSCHHHHHHHHHHHHHHHTTCC--CEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCCCCSSBCTTCTTSE
T ss_pred EEeeCccCcccCHHHHHHHHHHhCcCC--CceeCchhhhcccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCccccc
Confidence 9999999974 3322 33455443 344333445899999999999999999999863 1
Q ss_pred --------CCcEEEEEeecccceeEEEEEEec
Q 012506 416 --------DCRFGVISMCIGTGMGAAAVFERG 439 (462)
Q Consensus 416 --------~~~~gl~~~~~G~G~g~A~v~~~~ 439 (462)
+.++++++..+.||.+.++||++.
T Consensus 373 ~v~~~~~~~~~~a~~~sfGfgG~na~~vl~~~ 404 (406)
T 2vba_A 373 IVTETTDRELTTVMSNSFGFGGTNATLVMRKL 404 (406)
T ss_dssp ECCSCEECCCCEEEEEEEETTTEEEEEEEECC
T ss_pred cCCcccCCCCCEEEEcCCCCCCeEEEEEEEeC
Confidence 236888888888888889999863
|
| >2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.95 E-value=5.1e-27 Score=264.07 Aligned_cols=272 Identities=20% Similarity=0.247 Sum_probs=210.7
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCc----EEEEeccCCCCc-----------------cccHHHHHHHHcCCCCCcceE
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPSEVGD----IVVGTVLAPGSQ-----------------RASECRMAAFYAGFPETVPVR 132 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~~Id~----vivG~~~~~~~~-----------------~~~~a~~~a~~~Glp~~~p~~ 132 (462)
...+|+.+++++||+++|+++++||. |++|+..+++.. ....+..++..+|+ ++|++
T Consensus 94 p~~rL~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl--~Gps~ 171 (915)
T 2qo3_A 94 PQQRLLLETSWELVENAGIDPHSLRGTATGVFLGVAKFGYGEDTAAAEDVEGYSVTGVAPAVASGRISYTMGL--EGPSI 171 (915)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGGTTBCCEEEEECCCCCTTTTCC---CTTCHHHHTTCHHHHHHHHHHHHTB--CSCEE
T ss_pred HHHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEecCchHHhhhcccccccccccccccccHHHHHHHHHhCC--CCCEE
Confidence 34679999999999999999999995 899987655420 11357789999999 46999
Q ss_pred EecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHH
Q 012506 133 TVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRK 212 (462)
Q Consensus 133 ~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre 212 (462)
+|+++|+|++.||+.|++.|++|++|++||+|+|.++.... ..+
T Consensus 172 tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGve~~~~p~~---------------------~~~--------------- 215 (915)
T 2qo3_A 172 SVDTACSSSLVALHLAVESLRKGESSMAVVGGAAVMATPGV---------------------FVD--------------- 215 (915)
T ss_dssp EEECGGGHHHHHHHHHHHHHHTTSCSSEEEEEEECCSSTHH---------------------HHH---------------
T ss_pred EECCCCHHHHHHHHHHHHHHHcCCCCEEEEeEehhhcCHHH---------------------HHH---------------
Confidence 99999999999999999999999999999999999865100 000
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCC
Q 012506 213 EQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSS 292 (462)
Q Consensus 213 ~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s 292 (462)
+.+ .+ .+++|..+ +| |+. ..+..
T Consensus 216 ---------~~~------~~------------------------~ls~~g~~------------~~-Fd~-----~adG~ 238 (915)
T 2qo3_A 216 ---------FSR------QR------------------------ALAADGRS------------KA-FGA-----GADGF 238 (915)
T ss_dssp ---------HHT------TT------------------------CBCSSCCC------------CT-TBT-----TCCCB
T ss_pred ---------Hhh------hc------------------------ccCCCCCc------------cc-ccC-----CCCce
Confidence 000 00 01222222 22 443 12455
Q ss_pred CcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCC-----CCccHHHHHHHHHHHcCCCCCCccEEEecCCCHHH
Q 012506 293 QVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAI-----MGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ 367 (462)
Q Consensus 293 ~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~-----~~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~ 367 (462)
..+||+++|||++.+.|++.|.+++++|.|++........ .+.+...+++++|+++||+++||||+|+|++++..
T Consensus 239 v~gEGagavVL~~~~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~p~~~~~~~~i~~Al~~Agl~p~dId~ve~HgtgT~~ 318 (915)
T 2qo3_A 239 GFSEGVTLVLLERLSEARRNGHEVLAVVRGSALNQDGASNGLSAPSGPAQRRVIRQALESCGLEPGDVDAVEAHGTGTAL 318 (915)
T ss_dssp CBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSTTCCCHHHHHHHHHHHHHHTTCCGGGCCEEECCCCCCTT
T ss_pred eecCceEEEEEeEhHHhhhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCcEEEecCCCCcc
Confidence 5899999999999999999999999999999987532211 12345789999999999999999999999998753
Q ss_pred ----H-HHHHHHcCCC---CCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcC-------------------------
Q 012506 368 ----F-VYCRNKLGLD---PEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG------------------------- 414 (462)
Q Consensus 368 ----~-~~~~e~LGl~---~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~------------------------- 414 (462)
+ ..+.+.+|.. ..++|+++++..+||+.||+|+.++++++.+|+++.
T Consensus 319 gD~~E~~al~~~f~~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~~l~L~~~~ipp~~~~~~~~p~~~~~~~~~~~~~ 398 (915)
T 2qo3_A 319 GDPIEANALLDTYGRDRDADRPLWLGSVKSNIGHTQAAAGVTGLLKVVLALRNGELPATLHVEEPTPHVDWSSGGVALLA 398 (915)
T ss_dssp THHHHHHHHHHHTSSSCCTTSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCSSCSSBCTTSCCSSSSEEECS
T ss_pred CCHHHHHHHHHHhccccCCCCcccccCcccceeCCccccchHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCceeeec
Confidence 3 3344667764 347899999999999999999999999999999852
Q ss_pred --------CCCcEEEEEeecccceeEEEEEEecc
Q 012506 415 --------RDCRFGVISMCIGTGMGAAAVFERGD 440 (462)
Q Consensus 415 --------~~~~~gl~~~~~G~G~g~A~v~~~~~ 440 (462)
...++++++.++.||.+..+||+...
T Consensus 399 ~~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~~ 432 (915)
T 2qo3_A 399 GNQPWRRGERTRRAAVSAFGISGTNAHVIVEEAP 432 (915)
T ss_dssp SCEECCSSSSCCEEEEEEECTTSEEEEEEEEECC
T ss_pred CCcccccCCCCcEEEEeeecCCCceEEEEEeecc
Confidence 12378888888888899999998754
|
| >2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.95 E-value=5.4e-27 Score=263.91 Aligned_cols=270 Identities=21% Similarity=0.301 Sum_probs=210.1
Q ss_pred HHHHHHHHHHHHHHcCCCccccCc----EEEEeccCCCCc------------------cccHHHHHHHHcCCCCCcceEE
Q 012506 76 DDLLAPVLKAVIEKTNVDPSEVGD----IVVGTVLAPGSQ------------------RASECRMAAFYAGFPETVPVRT 133 (462)
Q Consensus 76 ~eL~~~A~~~Al~~agl~~~~Id~----vivG~~~~~~~~------------------~~~~a~~~a~~~Glp~~~p~~~ 133 (462)
..|+.+++++||+++|+++++||. |++|+...++.. ....+..++..+|+ ++|+++
T Consensus 117 ~rl~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl--~Gps~t 194 (917)
T 2hg4_A 117 QRIMLEISWEALERAGHDPVSLRGSATGVFTGVGTVDYGPRPDEAPDEVLGYVGTGTASSVASGRVAYCLGL--EGPAMT 194 (917)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGGTTSCEEEEEEECCCCCSCCTTSSCGGGGGGHHHHHCHHHHHHHHHHHHTC--CSCEEE
T ss_pred HHHHHHHHHHHHHHcCCChHHcCCcceEEEEEeCCchhhhhhhcCccccCcccccccccchHHHHHHHhcCC--CCCeEe
Confidence 468999999999999999999996 889987655421 11357789999999 469999
Q ss_pred ecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHH
Q 012506 134 VNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKE 213 (462)
Q Consensus 134 v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~ 213 (462)
|+++|+|++.||+.|++.|++|++|++||+|+|.++.... ..+
T Consensus 195 v~taCsSsl~Al~~A~~~I~~G~~d~aLvgGv~~~~~p~~---------------------~~~---------------- 237 (917)
T 2hg4_A 195 VDTACSSGLTALHLAMESLRRDECGLALAGGVTVMSSPGA---------------------FTE---------------- 237 (917)
T ss_dssp EECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSTHH---------------------HHH----------------
T ss_pred ecCCcHHHHHHHHHHHHHHHcCCCCEEEEeEeccccChhh---------------------hHh----------------
Confidence 9999999999999999999999999999999999876210 000
Q ss_pred HHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCC
Q 012506 214 QDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQ 293 (462)
Q Consensus 214 ~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~ 293 (462)
+. ..| .+++|..+ +| |+ +..|.+.
T Consensus 238 --------~~------~~~------------------------~ls~~g~~------------~p-Fd-----~~adG~~ 261 (917)
T 2hg4_A 238 --------FR------SQG------------------------GLAADGRC------------KP-FS-----KAADGFG 261 (917)
T ss_dssp --------HT------TSS------------------------CBCTTSCC------------CT-TB-----TTCCCBC
T ss_pred --------hh------hcc------------------------CcCCcccc------------Cc-cc-----ccccCCC
Confidence 00 000 12222222 33 43 3456677
Q ss_pred cCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCC-----CccHHHHHHHHHHHcCCCCCCccEEEecCCCHHH-
Q 012506 294 VSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIM-----GVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ- 367 (462)
Q Consensus 294 ~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~-----~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~- 367 (462)
.+||+++|||++.+.|++.|.+++++|.|++.+....... +.+...+++++|+++||+++|||++|+|++++..
T Consensus 262 ~gEGagavVL~~l~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~P~~~~q~~ai~~Al~~Agl~p~dId~veaHgtgT~~g 341 (917)
T 2hg4_A 262 LAEGAGVLVLQRLSAARREGRPVLAVLRGSAVNQDGASNGLTAPSGPAQQRVIRRALENAGVRAGDVDYVEAHGTGTRLG 341 (917)
T ss_dssp BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSSCCCHHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCTTH
T ss_pred CcceEEEEEEeeHHHHHhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEeeccCCCccC
Confidence 9999999999999999999999999999999876544322 1234579999999999999999999999999953
Q ss_pred ---HH-HHHHHcCCC---CCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcC--------------------------
Q 012506 368 ---FV-YCRNKLGLD---PEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG-------------------------- 414 (462)
Q Consensus 368 ---~~-~~~e~LGl~---~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~-------------------------- 414 (462)
+. .+.+.+|.. ..++|+++++..+||+.+|+|+..+++++.+|+++.
T Consensus 342 D~~E~~al~~~fg~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~vl~L~~~~ipp~~~~~~~~p~i~~~~~~~~v~~~ 421 (917)
T 2hg4_A 342 DPIEVHALLSTYGAERDPDDPLWIGSVKSNIGHTQAAAGVAGVMKAVLALRHGEMPRTLHFDEPSPQIEWDLGAVSVVSQ 421 (917)
T ss_dssp HHHHHHHHHTTTTTSSCTTSCCEEECTHHHHCBCGGGTTHHHHHHHHHHHHHTEECCCTTCCSBCTTSCC---CCEECCS
T ss_pred cHHHHHHHHHHhccccCCCCceeccCcccceecchhhhHHHHHHHHHHHHhcCCcCCCCCCCCCCccCCccccceeecCC
Confidence 33 233445653 247899999999999999999999999999999752
Q ss_pred -------CCCcEEEEEeecccceeEEEEEEecc
Q 012506 415 -------RDCRFGVISMCIGTGMGAAAVFERGD 440 (462)
Q Consensus 415 -------~~~~~gl~~~~~G~G~g~A~v~~~~~ 440 (462)
...++++++.++.||.+..+||+...
T Consensus 422 ~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~~ 454 (917)
T 2hg4_A 422 ARSWPAGERPRRAGVSSFGISGTNAHVIVEEAP 454 (917)
T ss_dssp CEECCCCSSCCEEEEEEECTTSEEEEEEEEECC
T ss_pred cccCCCCCCCCEEEEeeecCCCceEEEEeccCC
Confidence 01368888888888899999998754
|
| >1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A | Back alignment and structure |
|---|
Probab=99.95 E-value=4.7e-27 Score=233.90 Aligned_cols=256 Identities=21% Similarity=0.215 Sum_probs=191.0
Q ss_pred ecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCC
Q 012506 59 RTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQC 138 (462)
Q Consensus 59 rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~C 138 (462)
+|++.+ ++...++.++.+|+.+|+++||+++|+++++||.+++|+..++.. .++.+..++..+|++ .+|+++++++|
T Consensus 36 ~~gi~~-r~~~~~~~~~~~l~~~a~~~al~~ag~~~~~id~vi~~~~~~~~~-~~~~a~~v~~~lgl~-~~~~~~v~~aC 112 (313)
T 1zow_A 36 MTGIKE-RHWADDDQDTSDLAYEASVKAIADAGIQPEDIDMIIVATATGDMP-FPTVANMLQERLGTG-KVASMDQLAAC 112 (313)
T ss_dssp HHCCSE-EECCCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCS-SSCHHHHHHHHHTCC-SCCEEEEECGG
T ss_pred hhCceE-EEecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CCcHHHHHHHHhCCC-CCcEEEECCcC
Confidence 566654 345567889999999999999999999999999999999877654 567789999999996 48999999999
Q ss_pred chHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHH
Q 012506 139 SSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAA 218 (462)
Q Consensus 139 sSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a 218 (462)
+|+++||..|+++|++|++|++|++|+|.++...
T Consensus 113 as~~~al~~A~~~i~~g~~~~vLv~g~e~~s~~~---------------------------------------------- 146 (313)
T 1zow_A 113 SGFMYSMITAKQYVQSGDYHNILVVGADKLSKIT---------------------------------------------- 146 (313)
T ss_dssp GHHHHHHHHHHHHHHTTSCSCEEEEEEEEGGGTC----------------------------------------------
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEEEEEccccccc----------------------------------------------
Confidence 9999999999999999999999999999986510
Q ss_pred HHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcc
Q 012506 219 VDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGA 298 (462)
Q Consensus 219 ~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGA 298 (462)
+|. ++ .++...+|||
T Consensus 147 ----------------------------~~~-------------------------------d~------~~~~~~gdGa 161 (313)
T 1zow_A 147 ----------------------------DLT-------------------------------DR------STAVLFGDGA 161 (313)
T ss_dssp ----------------------------CTT-------------------------------CH------HHHTTBCEEE
T ss_pred ----------------------------Ccc-------------------------------cc------cceeeeccce
Confidence 000 00 0112269999
Q ss_pred eEEEEeCHHHHHhcCCCceEE-EEEEEEec---cCCC-----CC-C--------ccHHHHHHHHHHHcCCCCCCccEEEe
Q 012506 299 GAVLLMKRSVAMRKGLPILGV-FRTFAAVG---VDPA-----IM-G--------VGPAVAIPAAVKSAGLQLDDIDLFEI 360 (462)
Q Consensus 299 aAvvL~s~e~A~~~g~~~~~~-i~g~~~~~---~~p~-----~~-~--------~~~~~Ai~~aL~~AGl~~~DID~~ei 360 (462)
+|+||.+.+. +.++++. +.+.+... .-|. .+ + .....+++++|+++|++++|||+|++
T Consensus 162 ~A~vl~~~~~----~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~ 237 (313)
T 1zow_A 162 GAVIIGEVSE----GRGIISYEMGSDGTGGKHLYLDKDTGKLKMNGREVFKFAVRIMGDASTRVVEKANLTSDDIDLFIP 237 (313)
T ss_dssp EEEEEEECST----TCEEEEEEEEECGGGGGGEEECTTTCCEEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCSEEEE
T ss_pred EEEEEEecCC----CCceeEEEEEEcCCCcCeEEecCCCCeeEeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 9999987653 1223321 22211100 0011 01 1 13356899999999999999999999
Q ss_pred cCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeE-EEEEE
Q 012506 361 NEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGA-AAVFE 437 (462)
Q Consensus 361 hdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~-A~v~~ 437 (462)
|++++.....+.+.||++++++..+ +..+||+.++++...+.+++++-+-+.+ ++.|+.. .|+|+.. +++|+
T Consensus 238 H~~~~~~~d~~~~~lg~~~~~~~~~--~~~~Gh~~~as~~~~L~~~~~~~~~~~g--~~vl~~~-~G~G~t~~~~~l~ 310 (313)
T 1zow_A 238 HQANIRIMESARERLGISKDKMSVS--VNKYGNTSAASIPLSIDQELKNGKLKDD--DTIVLVG-FGGGLTWGAMTIK 310 (313)
T ss_dssp CCSCHHHHHHHHHHHTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHTTCCCTT--CEEEEEE-EETTTEEEEEEEE
T ss_pred cCCCHHHHHHHHHHhCCCHHHHHHh--HhhhCchHHHHHHHHHHHHHHcCCCCCC--CEEEEEE-EchhhhheEEEEE
Confidence 9999999888889999998876654 4569999999999999888766332334 6777765 4555555 44554
|
| >2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.5e-26 Score=228.12 Aligned_cols=242 Identities=17% Similarity=0.169 Sum_probs=183.1
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHH
Q 012506 73 TYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAI 152 (462)
Q Consensus 73 ~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I 152 (462)
.+..+|+.+|+++||+++|+++++||.+++|+..++.. .++.+..++..+|++ ..|+++++++|+|++.||..|+++|
T Consensus 48 ~~~~~l~~~a~~~al~~ag~~~~~id~v~~~~~~~~~~-~~~~a~~v~~~lgl~-~~~~~~v~~~C~s~~~al~~A~~~i 125 (309)
T 2ebd_A 48 ETITYMATQAAKEALREANLSPEELDLIILATLTPQKR-FPSTACLVQAQLKAK-GVYAFDISAACSGFIYALDIADSFI 125 (309)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSCSSS-SSCHHHHHHHHHTCT-TCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CCcHHHHHHHHhCCC-CceEEecCccchHHHHHHHHHHHHH
Confidence 67899999999999999999999999999999877654 567899999999996 4799999999999999999999999
Q ss_pred HccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcC
Q 012506 153 KAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAG 232 (462)
Q Consensus 153 ~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g 232 (462)
++|++|++|++|+|.++...
T Consensus 126 ~~g~~~~vlv~g~e~~s~~~------------------------------------------------------------ 145 (309)
T 2ebd_A 126 KSGKAKNVLVIGAEKLSEAV------------------------------------------------------------ 145 (309)
T ss_dssp HTTSCSEEEEEEEEEGGGTC------------------------------------------------------------
T ss_pred HCCCCCEEEEEEeccccccc------------------------------------------------------------
Confidence 99999999999999986410
Q ss_pred CCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhc
Q 012506 233 KFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRK 312 (462)
Q Consensus 233 ~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~ 312 (462)
+|. ...++...+|||+|+||++.+.++
T Consensus 146 --------------~~~-------------------------------------~~~~~~~~gdGaaA~vL~~~~~~~-- 172 (309)
T 2ebd_A 146 --------------DWE-------------------------------------DRSTCVLFGDGAGAVVVTRSEDKS-- 172 (309)
T ss_dssp --------------CTT-------------------------------------CTTTTTTBCEEEEEEEEEECSSSC--
T ss_pred --------------Ccc-------------------------------------chhhccccccccEEEEEEecCCCC--
Confidence 000 001123479999999999876431
Q ss_pred CCCceEEEEEEEEec----cCC-----CCCCc--------cHHHHHHHHHHHcCCCCCCccEEEecCCCHHHHHHHHHHc
Q 012506 313 GLPILGVFRTFAAVG----VDP-----AIMGV--------GPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKL 375 (462)
Q Consensus 313 g~~~~~~i~g~~~~~----~~p-----~~~~~--------~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~~~e~L 375 (462)
.+++...+..... ..| ...+. ....+++++|+++|++++|||+|++|++++.....+.+.|
T Consensus 173 --~i~~~~~~~~g~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~~~~~~~~l 250 (309)
T 2ebd_A 173 --DILATRMYAEGSLEELLHADNCGYIRMKGRELFKVAVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRIINALAEKL 250 (309)
T ss_dssp --EEEEEEEEECGGGGGGEEECTTCCEEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHHHHHHHHHT
T ss_pred --ceeEEEEEecCCccceeEeCCCCeEEEccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHHHHHHh
Confidence 1333222211000 011 00111 3357899999999999999999999999999888888999
Q ss_pred CCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEE-EE
Q 012506 376 GLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAA-VF 436 (462)
Q Consensus 376 Gl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~-v~ 436 (462)
|++++++..+ +..+||+.+|++..++.+++++-+-+.+ ++.|+.. .|.|+..+. +|
T Consensus 251 g~~~~~~~~~--~~~~Gh~~~As~~~~L~~~~~~g~~~~G--~~~l~~~-~G~G~~~~~~~l 307 (309)
T 2ebd_A 251 NIPKEKVFVN--IQKYGNTSAASIPIALHEAIKEGKVKRG--DLILMTA-MGGGLTWGAVLL 307 (309)
T ss_dssp TCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHTTCCCTT--CEEEEEE-EETTTEEEEEEE
T ss_pred CCCHHHhhhh--HhhhcchHHHHHHHHHHHHHHcCCCCCC--CEEEEEE-EchhhhhEEEEE
Confidence 9998877644 4569999999999999999876222233 6666665 455655544 44
|
| >1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.3e-25 Score=224.47 Aligned_cols=246 Identities=20% Similarity=0.178 Sum_probs=185.9
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHH
Q 012506 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAA 150 (462)
Q Consensus 71 ~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~ 150 (462)
++.+..+|+.+|+++||+++|+++++||.+++|+..++.. .++.+..++..+|+ ++|+++++++|+|+++||..|++
T Consensus 46 ~~~~~~~la~~a~~~al~~ag~~~~~id~vi~~~~~~~~~-~~~~a~~v~~~lgl--~~~~~~v~~aCas~~~al~~A~~ 122 (322)
T 1ub7_A 46 EDEYTSDLAFKAVEDLLRRHPGALEGVDAVIVATNTPDAL-FPDTAALVQARFGL--KAFAYDLLAGCPGWIYALAQAHA 122 (322)
T ss_dssp TTCCHHHHHHHHHHHHHHHSTTTTTTEEEEEEECSSCSEE-ESCHHHHHHHHTTC--CCEEEEEECSTTHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CCcHHHHHHHHhCC--CCEEEeeCccchHHHHHHHHHHH
Confidence 4778999999999999999999999999999999876653 45688999999999 58999999999999999999999
Q ss_pred HHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Q 012506 151 AIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 230 (462)
Q Consensus 151 ~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~ 230 (462)
+|++|++|++|++|+|.++...
T Consensus 123 ~i~~g~~~~vlv~g~e~~s~~~---------------------------------------------------------- 144 (322)
T 1ub7_A 123 LVEAGLAQKVLAVGAEALSKII---------------------------------------------------------- 144 (322)
T ss_dssp HHHTTSCSEEEEEEEECGGGTS----------------------------------------------------------
T ss_pred HHHcCCCCEEEEEEechhcccc----------------------------------------------------------
Confidence 9999999999999999986510
Q ss_pred cCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHH
Q 012506 231 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 310 (462)
Q Consensus 231 ~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~ 310 (462)
+|. + ..+....+|||+|+||.+.+.
T Consensus 145 ----------------~~~-------------------------------d------~~~~~~~GdGA~A~vL~~~~~-- 169 (322)
T 1ub7_A 145 ----------------DWN-------------------------------D------RATAVLFGDGGGAAVVGKVRE-- 169 (322)
T ss_dssp ----------------CTT-------------------------------C------HHHHTTBCCEEEEEEEECCCT--
T ss_pred ----------------Chh-------------------------------h------cccceeeccccEEEEEEecCC--
Confidence 000 0 001112699999999987653
Q ss_pred hcCCCceEEE-EEEEEec----c------CCCC---------CC--------ccHHHHHHHHHHHcCCCCCCccEEEecC
Q 012506 311 RKGLPILGVF-RTFAAVG----V------DPAI---------MG--------VGPAVAIPAAVKSAGLQLDDIDLFEINE 362 (462)
Q Consensus 311 ~~g~~~~~~i-~g~~~~~----~------~p~~---------~~--------~~~~~Ai~~aL~~AGl~~~DID~~eihd 362 (462)
+..+++.. .+.+... . .|.. .+ .....+++++|+++|++++|||+|++|+
T Consensus 170 --~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~ 247 (322)
T 1ub7_A 170 --GYGFRSFVLGADGTGAKELYHACVAPRLPDGTSMKNRLYMNGREVFKFAVRVMNTATLEAIEKAGLTPEDIRLFVPHQ 247 (322)
T ss_dssp --TCEEEEEEEEECGGGCTTEEEESSCSBCTTSCBCCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECC
T ss_pred --CCceeEEEEEEecCCCCeEEeCCCCCCCCccccccceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcC
Confidence 22233333 1111100 0 0221 01 1345789999999999999999999999
Q ss_pred CCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEe
Q 012506 363 AFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 363 afa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
+++.....+.+.||++++++..+ +..+||+.+|++...+.+++++-+-+.+ ++.|+...+.|+...+++|+.
T Consensus 248 ~~~~~~d~~~~~lg~~~~~~~~~--~~~~Gh~~~As~~~~l~~~l~~g~~~~g--~~~l~~~~G~G~~~~~~vl~~ 319 (322)
T 1ub7_A 248 ANLRIIDAARERLGLPWERVAVN--VDRYGNTSTASIPLALKEAVDAGRIREG--DHVLLVSFGAGLTWAAAVLTW 319 (322)
T ss_dssp SCHHHHHHHHHTTTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHHTSSCTT--CEEEEEEEETTTEEEEEEEEC
T ss_pred CCHHHHHHHHHHcCCCHHHHHHH--HHhhCcHHHHHHHHHHHHHHHhCCCCCC--CEEEEEEEChhheeEEEEEEe
Confidence 99998888889999998877654 4469999999999988888765332334 677777655544555667764
|
| >1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A | Back alignment and structure |
|---|
Probab=99.94 E-value=9.5e-26 Score=226.58 Aligned_cols=248 Identities=17% Similarity=0.171 Sum_probs=182.8
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHH
Q 012506 68 GGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVAD 147 (462)
Q Consensus 68 g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~ 147 (462)
...++.+..+|+.+|+++||+++|+++++||.|++++..++.. .+..+..++..+|++ ++|+++++.+|+|+++||..
T Consensus 54 ~~~~~~~~~~la~~A~~~al~~ag~~~~~id~vi~~t~~~~~~-~~~~a~~v~~~lgl~-~~~~~~v~~aC~s~~~al~~ 131 (335)
T 1u6e_A 54 FAADDESAASMATEACRRALSNAGLSAADIDGVIVTTNTHFLQ-TPPAAPMVAASLGAK-GILGFDLSAGAAGFGYALGA 131 (335)
T ss_dssp ECCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCS-SSCHHHHHHHHHTCT-TSEEEEEECGGGHHHHHHHH
T ss_pred ecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CChHHHHHHHHhCCC-CCcEeeeccccHHHHHHHHH
Confidence 3446789999999999999999999999999999999877654 567899999999995 68999999999999999999
Q ss_pred HHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Q 012506 148 VAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAA 227 (462)
Q Consensus 148 Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~ 227 (462)
|+++|++|.+|++||+|+|.++...
T Consensus 132 A~~~i~~g~~~~vLv~g~e~~s~~~------------------------------------------------------- 156 (335)
T 1u6e_A 132 AADMIRGGGAATMLVVGTEKLSPTI------------------------------------------------------- 156 (335)
T ss_dssp HHHHHHHTSCSSEEEEEEEECGGGC-------------------------------------------------------
T ss_pred HHHHHHcCCCCEEEEEEEccccccc-------------------------------------------------------
Confidence 9999999999999999999986410
Q ss_pred HHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHH
Q 012506 228 ATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRS 307 (462)
Q Consensus 228 a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e 307 (462)
+|. + ..++...+|||+|+||.+.+
T Consensus 157 -------------------~~~-------------------------------d------~~~~~~~gDGA~A~vl~~~~ 180 (335)
T 1u6e_A 157 -------------------DMY-------------------------------D------RGNCFIFADGAAAVVVGETP 180 (335)
T ss_dssp -------------------CTT-------------------------------C------TTTTTTBCEEEEEEEEEECS
T ss_pred -------------------Ccc-------------------------------c------cccceEeccccEEEEEEecC
Confidence 010 0 01233479999999998765
Q ss_pred HHHhcCCCceEEEEEE-EEec----c---------CCC------CC-C--------ccHHHHHHHHHHHcCCCCCCccEE
Q 012506 308 VAMRKGLPILGVFRTF-AAVG----V---------DPA------IM-G--------VGPAVAIPAAVKSAGLQLDDIDLF 358 (462)
Q Consensus 308 ~A~~~g~~~~~~i~g~-~~~~----~---------~p~------~~-~--------~~~~~Ai~~aL~~AGl~~~DID~~ 358 (462)
. .+ ++..+.+. +... . .|. .+ + .....+++++|+++|++++|||+|
T Consensus 181 ~---~~--i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~dId~~ 255 (335)
T 1u6e_A 181 F---QG--IGPTVAGSDGEQADAIRQDIDWITFAQNPSGPRPFVRLEGPAVFRWAAFKMGDVGRRAMDAAGVRPDQIDVF 255 (335)
T ss_dssp S---CC--BCCCEEEECGGGGGGEEESSCHHHHHTSTTSCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCCEE
T ss_pred C---CC--eeEEEEEEcCCcccceeecCCccCcCCCccCccceEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEE
Confidence 3 12 22222221 1000 0 111 01 1 123468899999999999999999
Q ss_pred EecCCCHHHHHHHHHHcCCCCC-CCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeE-EEEE
Q 012506 359 EINEAFASQFVYCRNKLGLDPE-KINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGA-AAVF 436 (462)
Q Consensus 359 eihdafa~~~~~~~e~LGl~~~-~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~-A~v~ 436 (462)
++|++++.....+.+.||++++ ++..+ .-.+||+.+++....+.+++.+-+-+.+ ++.|+... |+|+.. +++|
T Consensus 256 ~~H~~~~~~~~~~~~~lg~~~~~~~~~~--~~~~Gnt~sAs~~~~L~~~~~~~~~~~g--~~~l~~~~-G~G~t~~~~vl 330 (335)
T 1u6e_A 256 VPHQANSRINELLVKNLQLRPDAVVAND--IEHTGNTSAASIPLAMAELLTTGAAKPG--DLALLIGY-GAGLSYAAQVV 330 (335)
T ss_dssp EECCSCHHHHHHHHHHHTCCTTCEECCT--HHHHCBCGGGHHHHHHHHHHHHTSSCTT--CEEEEEEE-ETTTEEEEEEE
T ss_pred EECCCCHHHHHHHHHHcCCCchhhhhhh--hhhhCcHHHHHHHHHHHHHHHcCCCCCC--CEEEEEEE-ehhheeEEEEE
Confidence 9999999999999999999988 65544 3459999999976555555443221223 67777764 555555 5555
Q ss_pred Ee
Q 012506 437 ER 438 (462)
Q Consensus 437 ~~ 438 (462)
+.
T Consensus 331 ~~ 332 (335)
T 1u6e_A 331 RM 332 (335)
T ss_dssp EC
T ss_pred Ee
Confidence 54
|
| >4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.93 E-value=5.3e-25 Score=221.51 Aligned_cols=255 Identities=22% Similarity=0.184 Sum_probs=186.3
Q ss_pred ecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCC
Q 012506 59 RTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQC 138 (462)
Q Consensus 59 rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~C 138 (462)
||++.+ ++...++.+..+|+.+|+++||+++|+++++||.|++++..++.. .+..+..++..+|+|.++|+++++.+|
T Consensus 50 rtgi~~-r~~~~~~~~~~~la~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~-~p~~a~~v~~~lgl~~~~~~~~v~~~C 127 (333)
T 4dfe_A 50 RTGIHA-RYFAEPDVTTSDLAFIASQRAIEAADIDPQSIDLIIVATSTPDFV-FPSTACLLQNKLGIRNHGAAFDVQAVC 127 (333)
T ss_dssp HHCCSE-EEECCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSSS-BSCHHHHHHHHTTCCSCCEEEEEECGG
T ss_pred hcCceE-EEEcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CCcHHHHHHHHhCCCCCCcEEEeCccc
Confidence 455554 334557889999999999999999999999999999999887665 677899999999997789999999999
Q ss_pred chHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHH
Q 012506 139 SSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAA 218 (462)
Q Consensus 139 sSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a 218 (462)
+|+++||..|+++|++|.++++|++|+|.+|...
T Consensus 128 ~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~---------------------------------------------- 161 (333)
T 4dfe_A 128 SGFAYAVATADSFIRSGQHRTALVIGAETFSRIL---------------------------------------------- 161 (333)
T ss_dssp GHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGGC----------------------------------------------
T ss_pred HHHHHHHHHHHHHHHcCCCCEEEEEEeecccccc----------------------------------------------
Confidence 9999999999999999999999999999987610
Q ss_pred HHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcc
Q 012506 219 VDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGA 298 (462)
Q Consensus 219 ~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGA 298 (462)
++. | ...+...+|||
T Consensus 162 ----------------------------~~~-----------d--------------------------~~~~~lfGDGA 176 (333)
T 4dfe_A 162 ----------------------------DFK-----------D--------------------------RTTCVLFGDGA 176 (333)
T ss_dssp ----------------------------CTT-----------C--------------------------TTTTTTBCEEE
T ss_pred ----------------------------Ccc-----------c--------------------------ccceeeecccc
Confidence 000 0 00122369999
Q ss_pred eEEEEeCHHHHHhcCCCceEEEEE-EEEec---cCC-----------C--CCC---------ccHHHHHHHHHHHcCCCC
Q 012506 299 GAVLLMKRSVAMRKGLPILGVFRT-FAAVG---VDP-----------A--IMG---------VGPAVAIPAAVKSAGLQL 352 (462)
Q Consensus 299 aAvvL~s~e~A~~~g~~~~~~i~g-~~~~~---~~p-----------~--~~~---------~~~~~Ai~~aL~~AGl~~ 352 (462)
+|+||.+.+. ..++..... .+... ..| . .|. .....+++++|+++|+++
T Consensus 177 ~A~vl~~~~~-----~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~ 251 (333)
T 4dfe_A 177 GAVILQASDE-----PGVLASALHADGSHSNILCTPGNVNGGVVSGSAFLHMDGQAVFKLAVNVLEKVAVEALEKANLSA 251 (333)
T ss_dssp EEEEEEEESS-----CSEEEEEEEECGGGGGGEEBCEEEETTEEEECCSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCG
T ss_pred EEEEEEEcCC-----CCeEEEEEEEccCCcCeEEECCCCCCcccccCcceeeccHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 9999987651 122211111 00000 000 0 010 112467889999999999
Q ss_pred CCccEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeE
Q 012506 353 DDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGA 432 (462)
Q Consensus 353 ~DID~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~ 432 (462)
+|||+|.+|+++..+...+.+.||++++++..+ .--+||...++-...+.+++.+-+-+.+ ++.|... .|.|+.+
T Consensus 252 ~did~~~~Hq~~~~i~~~~~~~lgl~~~~~~~~--l~~~GNt~sasi~~~L~~~~~~g~~~~G--d~vll~~-~G~G~t~ 326 (333)
T 4dfe_A 252 EQIDWLIPHQANIRIMQSTCRKLGLPQERMIVT--VGEHGNTSAASIPLALDVAVRDGRIKRG--QNVLIEG-VGGGFTW 326 (333)
T ss_dssp GGCSEEEECCSCHHHHHHHHHHTTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHTTCSCTT--CEEEEEE-EETTTEE
T ss_pred HHCCEEEEcCCCHHHHHHHHHHhCCCHHHhhhh--HHhcCchHHHHHHHHHHHHHHcCCCCCC--CEEEEEE-Echhhee
Confidence 999999999999999999999999999987764 3458999999876666666543222223 4555543 5667666
Q ss_pred EEEE
Q 012506 433 AAVF 436 (462)
Q Consensus 433 A~v~ 436 (462)
+.++
T Consensus 327 ~~~l 330 (333)
T 4dfe_A 327 GASV 330 (333)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4433
|
| >3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-24 Score=245.98 Aligned_cols=264 Identities=21% Similarity=0.220 Sum_probs=196.6
Q ss_pred HHHHHHHHHHHHHHcCCCccccC----cEEEEeccCCCC------------------ccccHHHHHHHHcCCCCCcceEE
Q 012506 76 DDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS------------------QRASECRMAAFYAGFPETVPVRT 133 (462)
Q Consensus 76 ~eL~~~A~~~Al~~agl~~~~Id----~vivG~~~~~~~------------------~~~~~a~~~a~~~Glp~~~p~~~ 133 (462)
..|+.+++++||+++|+++++|| ++++|+...+.. .....+..++..+|+ ++|+++
T Consensus 81 ~rL~leaa~eALedAGi~~~~i~~~~~Gv~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl--~GPs~t 158 (965)
T 3hhd_A 81 LRLLLEVTYEAIVDGGINPDSLRGTHTGVWVGVSGSETSEALSRDPETLVGYSMVGCQRAMMANRLSFFFDF--RGPSIA 158 (965)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGGTTSCCEEEEEECCCHHHHHHTSCTTTCCTHHHHHHSTTHHHHHHHHHHTC--CSCEEE
T ss_pred HHHHHHHHHHHHHHcCCChHHcCCceeEEEEeccchhHHHHHhcCccccCcccccccccchHHHHHHHHhCC--CCCeee
Confidence 45999999999999999999999 688886544320 123467889999999 579999
Q ss_pred ecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHH
Q 012506 134 VNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKE 213 (462)
Q Consensus 134 v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~ 213 (462)
|+++|+|+++||++|++.|++|++|++||+|+|.|+.... ..+
T Consensus 159 vdtACSSsl~Al~~A~~~I~~G~~d~aLagGv~~~~~p~~---------------------~~~---------------- 201 (965)
T 3hhd_A 159 LDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVLLKPNT---------------------SVQ---------------- 201 (965)
T ss_dssp EECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCCHHH---------------------HHH----------------
T ss_pred ecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHH---------------------HHH----------------
Confidence 9999999999999999999999999999999999875100 000
Q ss_pred HHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC--CCCcccCCC
Q 012506 214 QDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK--DGTTTAGNS 291 (462)
Q Consensus 214 ~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p--~g~~t~~~~ 291 (462)
+.+. +. +++|..+ +| |+. +|..
T Consensus 202 --------~~~~------~~------------------------ls~~g~~------------~~-Fd~~adG~~----- 225 (965)
T 3hhd_A 202 --------FLRL------GM------------------------LSPEGTC------------KA-FDTAGNGYC----- 225 (965)
T ss_dssp --------HHHH------TC------------------------BCTTCCC------------CT-TBTTCCSBC-----
T ss_pred --------HHhc------cC------------------------cCCCCcc------------cc-chhccCCcc-----
Confidence 0000 00 1122222 22 443 3333
Q ss_pred CCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCC------ccHHHHHHHHHHHcCCCCCCccEEEecCCCH
Q 012506 292 SQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMG------VGPAVAIPAAVKSAGLQLDDIDLFEINEAFA 365 (462)
Q Consensus 292 s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~------~~~~~Ai~~aL~~AGl~~~DID~~eihdafa 365 (462)
.+||+++|||++.+.|+ +++++|+|++.+.......+ .+...+++++|++|||+++||||+|.|.+++
T Consensus 226 --~gEGagavvL~~l~~A~----~i~a~I~g~~~n~dg~~~~~~t~P~~~~q~~~i~~Al~~Agl~p~dIdyvEaHgTgT 299 (965)
T 3hhd_A 226 --RSEGVVAVLLTKKSLAR----RVYATILNAGTNTDGFKEQGVTFPSGDIQEQLIRSLYQSAGVAPESFEYIEAHGTGT 299 (965)
T ss_dssp --BBCEEEEEEEEEGGGCS----SCSEEEEEEEEEECCCCTTCTTSCCHHHHHHHHHHHHHHTTCCGGGEEEEECCCCCC
T ss_pred --ccceEEEEEEecHHHcC----cccEEEEeeeccCCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHhccccccCCCC
Confidence 69999999999999886 48899999998875544222 2356899999999999999999999999999
Q ss_pred H----HHHHHH-HHcCCC-CCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC------------------------
Q 012506 366 S----QFVYCR-NKLGLD-PEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR------------------------ 415 (462)
Q Consensus 366 ~----~~~~~~-e~LGl~-~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~------------------------ 415 (462)
. .+...+ +.++-. ..++.+.+-+..+||+.||+|+.+++.++.+|+++.-
T Consensus 300 ~~gD~~E~~Al~~~f~~~~~~~~~vgs~Ks~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~~v~ 379 (965)
T 3hhd_A 300 KVGDPQELNGITRALCATRQEPLLIGSTKSNMGHPEPASGLAALAKVLLSLEHGLWAPNLHFHSPNPEIPALLDGRLQVV 379 (965)
T ss_dssp TTHHHHHHHHHHHHHCSSCSSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCSSCCSBCTTCHHHHHTSEEEC
T ss_pred CCCCHHHHHHHHHHhcccCCCceeeeccccccccchhhhhHHHHHHHHHHHhcCCcCCccCCCCCCccCcccccCceeec
Confidence 4 454444 445533 2355555555558999999999999999999998620
Q ss_pred ------CCcEEEEEeecccceeEEEEEEecc
Q 012506 416 ------DCRFGVISMCIGTGMGAAAVFERGD 440 (462)
Q Consensus 416 ------~~~~gl~~~~~G~G~g~A~v~~~~~ 440 (462)
..++++++..+.||.+.++||+...
T Consensus 380 ~~~~~~~~~~a~v~sfG~gG~Nah~il~~~~ 410 (965)
T 3hhd_A 380 DQPLPVRGGNVGINSFGFGGSNVHIILRPNT 410 (965)
T ss_dssp CSCEECCSCEEEEEEECTTSEEEEEEEEECC
T ss_pred CCCccCCCCeEEEecccCCCceEEEEeccCC
Confidence 0135667777788899999998754
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.1e-25 Score=270.14 Aligned_cols=280 Identities=15% Similarity=0.180 Sum_probs=203.1
Q ss_pred HHHHHHHHHHHHHHHcCCCccccC--------cEEEEeccCCCCc-----------------------cccH-HHHHHHH
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVG--------DIVVGTVLAPGSQ-----------------------RASE-CRMAAFY 122 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id--------~vivG~~~~~~~~-----------------------~~~~-a~~~a~~ 122 (462)
...|+.+++++||+++|+++++|+ ++++|+..+.... .... ++.+..+
T Consensus 2647 ~~rL~l~aa~eALedAGi~p~~l~~~~~~~~vGV~vG~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~is~~~ 2726 (3089)
T 3zen_D 2647 VALWNIVATVDAFLSSGFTPTELMRWVHPSQVASTQGTGMGGMTSMQTMYHGNLLGRAKPNDILQEVLPNVVAAHVMQSY 2726 (3089)
T ss_dssp HHHHHHHHHHHHHTTSCSCGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHHHHHTTCCCCTTHHHHTSTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHhhcccCcceeEEEEeecCccHHHHHHHHHHHhcCCCccchhhccccccHHHHHHHHHH
Confidence 467999999999999999999885 5888876432100 0112 3333446
Q ss_pred cCCCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHH-H
Q 012506 123 AGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTS-E 201 (462)
Q Consensus 123 ~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a-~ 201 (462)
+|+ ++|+++|+++|+|+++||+.|++.|++|++|++||+|+|.|+...+ ..+..|+..+ .
T Consensus 2727 lGl--~GPs~tV~tACSSsl~Al~~A~~~IrsG~~d~aLaGGve~ls~~~~-----------------~~f~~~~als~~ 2787 (3089)
T 3zen_D 2727 VGG--YGAMVHPVGACATAAVSVEEGVDKIKLGKADLVIAGGFDDLTLEAI-----------------IGFGDMAATADT 2787 (3089)
T ss_dssp TCC--CSCEECCBCTTCHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHH-----------------HHHHHHTCBCCH
T ss_pred cCC--CCCceeeccchhhHHHHHHHHHHHHHCCCCCeeEEeeecccCHHHH-----------------HHHHHhhhhhcc
Confidence 799 5799999999999999999999999999999999999999865110 0000010000 0
Q ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCccc
Q 012506 202 NVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFK 281 (462)
Q Consensus 202 ~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~ 281 (462)
.++..++. +| +.. .+| |+
T Consensus 2788 ~~~~~~~~-------------------------------------sp------------~~~------------crp-Fd 2805 (3089)
T 3zen_D 2788 EMMRAKGI-------------------------------------SD------------SKF------------SRA-ND 2805 (3089)
T ss_dssp HHHHHTTC-------------------------------------CT------------TTS------------CCS-SB
T ss_pred hhhhhccC-------------------------------------Cc------------ccc------------cCc-cc
Confidence 01111110 11 122 233 43
Q ss_pred C--CCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCCC-------------ccHHHHHHHHHH
Q 012506 282 K--DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIMG-------------VGPAVAIPAAVK 346 (462)
Q Consensus 282 p--~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~~-------------~~~~~Ai~~aL~ 346 (462)
. +|.+ ++||++++||++.+.|+++|.+|++.|.+++.+. ++..++ .+...+++++|+
T Consensus 2806 ~~~dG~v-------~GEGAgavVL~~~e~A~~~G~~I~avI~g~~~n~-Dg~~~~~~aP~~g~~~a~~~~q~~ai~~AL~ 2877 (3089)
T 3zen_D 2806 RRRLGFL-------EAQGGGTILLARGDLALKMGLPVLAVVGYAQSFA-DGVHTSIPAPGLGALGAARGGRESTLARSLA 2877 (3089)
T ss_dssp TTCCCBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEC-CCCCCCSSCCCCGGGGGSTTGGGSHHHHHHH
T ss_pred cCCCCEE-------EeccceEEEEeeHHHHHhCCCceEEEEEEEEEec-CCcccCccCCchhHHhHhhhhHHHHHHHHHH
Confidence 2 3443 7999999999999999999999999776666543 222211 122358999999
Q ss_pred HcCCCCCCccEEEecCCCHH----HHH----HHHHHcCCCC-CCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC--
Q 012506 347 SAGLQLDDIDLFEINEAFAS----QFV----YCRNKLGLDP-EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR-- 415 (462)
Q Consensus 347 ~AGl~~~DID~~eihdafa~----~~~----~~~e~LGl~~-~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~-- 415 (462)
++||+++||||+|.|++++. .+. .+.+.||... .++|+++++..+|||.||+|+.+++.++.+|+++.-
T Consensus 2878 ~AGl~p~DIdyVEaHGTGT~lgD~~E~~al~al~~~fg~~~~~~~~v~s~Ks~iGH~~gAAG~~~lik~ll~L~~g~iPp 2957 (3089)
T 3zen_D 2878 QLGVGADDIAVISKHDTSTLANDPNETELHERIADSMGRAPGNPLFIVSQKTLTGHAKGGAAVFQMMGLCQILRDGVIPP 2957 (3089)
T ss_dssp TTTCCGGGEEEEECCCCCCTTHHHHHHHHHHHHHHHTTCCTTCCEEEECSHHHHCBCSTTHHHHHHHHHHHHHHHCCBCC
T ss_pred HcCCCHHHeeEEEEecCCcccccHHHHHHHHHHHHHhCccCCCcceecccccccCCchhhhhHHHHHHHHHHHhcCccCC
Confidence 99999999999999999886 333 3556788775 689999999999999999999999999999997520
Q ss_pred ------------------------------CCcEEEEEeecccceeEEEEEEeccccc
Q 012506 416 ------------------------------DCRFGVISMCIGTGMGAAAVFERGDCAD 443 (462)
Q Consensus 416 ------------------------------~~~~gl~~~~~G~G~g~A~v~~~~~~~~ 443 (462)
+.++++++..+.||.++.+||+..+...
T Consensus 2958 t~~~~~~np~i~~~~~~~~~~~~~~w~~~~~~r~a~vnSfGfGG~NahvVle~~~~~~ 3015 (3089)
T 3zen_D 2958 NRSLDCVDDELATSGHFVWVREPLDLRGKFPLKAGLVTSLGFGHVSGLVALVHPEAFI 3015 (3089)
T ss_dssp CTTCSSBCGGGGGCSSEEECSSCBCCCTTSCCCEEEEEEEETTTEEEEEEEECGGGTG
T ss_pred CCCCCCCCCCccccCCeeecCCCccCCCCCCCCEEEEccccCCCCeEEEEEecCchhh
Confidence 1368888888888899999999865543
|
| >1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.8e-24 Score=215.79 Aligned_cols=242 Identities=17% Similarity=0.218 Sum_probs=182.3
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHH
Q 012506 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAA 150 (462)
Q Consensus 71 ~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~ 150 (462)
++.+..+|+.+|+++||+++|+++++||.|++|+..++.. .+..+..++..+|++ .+|+++++++|+|+++||..|++
T Consensus 47 ~~~~~~~l~~~a~~~al~~ag~~~~~id~vi~g~~~~~~~-~~~~a~~v~~~lgl~-~~~~~~v~~aCas~~~al~~A~~ 124 (317)
T 1hnj_A 47 PNETVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHA-FPSAACQIQSMLGIK-GCPAFDVAAACAGFTYALSVADQ 124 (317)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSCS-SSCHHHHHHHHHTCC-SSCEEEECCGGGHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CCcHHHHHHHHhCCC-CCeEEeeCcccHHHHHHHHHHHH
Confidence 5778999999999999999999999999999999877654 567899999999996 48999999999999999999999
Q ss_pred HHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Q 012506 151 AIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 230 (462)
Q Consensus 151 ~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~ 230 (462)
+|++|++|++|++|+|.++...
T Consensus 125 ~i~~g~~~~vlv~g~e~~s~~~---------------------------------------------------------- 146 (317)
T 1hnj_A 125 YVKSGAVKYALVVGSDVLARTC---------------------------------------------------------- 146 (317)
T ss_dssp HHHTTSCSEEEEEEEECHHHHS----------------------------------------------------------
T ss_pred HHHCCCCCEEEEEEechhcccC----------------------------------------------------------
Confidence 9999999999999999975410
Q ss_pred cCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHH
Q 012506 231 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 310 (462)
Q Consensus 231 ~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~ 310 (462)
+|. + + .+....+|||+|+||.+.+.
T Consensus 147 ----------------~~~------------d-------------------~------~~~~~~GdGA~A~vL~~~~~-- 171 (317)
T 1hnj_A 147 ----------------DPT------------D-------------------R------GTIIIFGDGAGAAVLAASEE-- 171 (317)
T ss_dssp ----------------CTT------------C-------------------H------HHHTTBCCEEEEEEEEEESS--
T ss_pred ----------------Cch------------h-------------------c------ccceeeccccEEEEEEecCC--
Confidence 000 0 0 00112699999999987652
Q ss_pred hcCCCceEEEEEE-EEec---cCCC-------------CCCc--------cHHHHHHHHHHHcCCCCCCccEEEecCCCH
Q 012506 311 RKGLPILGVFRTF-AAVG---VDPA-------------IMGV--------GPAVAIPAAVKSAGLQLDDIDLFEINEAFA 365 (462)
Q Consensus 311 ~~g~~~~~~i~g~-~~~~---~~p~-------------~~~~--------~~~~Ai~~aL~~AGl~~~DID~~eihdafa 365 (462)
..+++.+.+. +... ..|. ..+. ....+++++|+++|++++|||+|++|..++
T Consensus 172 ---~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~ 248 (317)
T 1hnj_A 172 ---PGIISTHLHADGSYGELLTLPNADRVNPENSIHLTMAGNEVFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANL 248 (317)
T ss_dssp ---CSEEEEEEEECGGGGGGEECCCCCSSCTTSCCSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSCH
T ss_pred ---CceeeEEEEEcCCCCCeEEECCCCCCCCCCCceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCH
Confidence 2355544432 1100 0111 0011 335789999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEE
Q 012506 366 SQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAV 435 (462)
Q Consensus 366 ~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v 435 (462)
.....+.+.||++++++..+ +-.+||..++++...+.+++.+-+-+.+ ++.|... .|.|+.++.+
T Consensus 249 ~~~d~i~~~lg~~~~~~~~~--~~~~Gn~~~As~~~~L~~~~~~~~~~~G--~~vll~~-~G~G~t~~~~ 313 (317)
T 1hnj_A 249 RIISATAKKLGMSMDNVVVT--LDRHGNTSAASVPCALDEAVRDGRIKPG--QLVLLEA-FGGGFTWGSA 313 (317)
T ss_dssp HHHHHHHHHTTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHTTCSCTT--CEEEEEE-EETTTEEEEE
T ss_pred HHHHHHHHHcCCCHHHhHhh--HhhhCcHHHHHHHHHHHHHHHhCCCCCC--CEEEEEE-EchhheeEEE
Confidence 98888889999998877543 3459999999999888887754222234 5555554 4566666443
|
| >3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.9e-23 Score=209.41 Aligned_cols=243 Identities=16% Similarity=0.149 Sum_probs=179.8
Q ss_pred CCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHH
Q 012506 70 FKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVA 149 (462)
Q Consensus 70 ~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa 149 (462)
.++.++.+|+.+|+++||+++|+++++||.|++++..++.. .+..+..++..+|++ ++++++++.+|+|+++||..|+
T Consensus 53 ~~~~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~-~p~~a~~v~~~lGl~-~~~~~~v~~~C~s~~~al~~A~ 130 (323)
T 3il3_A 53 AEDETVATMGFEAAKNAIEAAQINPQDIELIIVATTSHSHA-YPSAACQVQGLLNID-DAISFDLAAACTGFVYALSVAD 130 (323)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHCCCGGGCCEEEEECSCCSCS-SSCHHHHHHHHTTCS-SCEEEEECCGGGHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CccHHHHHHHHhCCC-CccEEEECCccHHHHHHHHHHH
Confidence 46789999999999999999999999999999999887665 577899999999996 7899999999999999999999
Q ss_pred HHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH
Q 012506 150 AAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAAT 229 (462)
Q Consensus 150 ~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~ 229 (462)
++|++|.++++|++|+|.||....
T Consensus 131 ~~i~~g~~~~vLvvg~e~~s~~~~-------------------------------------------------------- 154 (323)
T 3il3_A 131 QFIRAGKVKKALVIGSDLNSRKLD-------------------------------------------------------- 154 (323)
T ss_dssp HHHHTTSCSEEEEEEEEEGGGSCC--------------------------------------------------------
T ss_pred HHHHCCCCCEEEEEEeeccccccC--------------------------------------------------------
Confidence 999999999999999999976210
Q ss_pred HcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHH
Q 012506 230 AAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVA 309 (462)
Q Consensus 230 ~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A 309 (462)
+. | | ..+...+|||+|+||.+.+
T Consensus 155 ------------------~~-----------d---~-----------------------~~~~lfGDGA~A~vl~~~~-- 177 (323)
T 3il3_A 155 ------------------ET-----------D---R-----------------------STVVLFGDGAGAVILEASE-- 177 (323)
T ss_dssp ------------------TT-----------C---T-----------------------TTTTTBCEEEEEEEEEEES--
T ss_pred ------------------cc-----------c---c-----------------------ccccccccceEEEEEEEcC--
Confidence 00 0 0 0122369999999998754
Q ss_pred HhcCCCceEEEEEE-EEec---cCCC---------CCC-cc----------HHHHHHHHHHHcCCCCCCccEEEecCCCH
Q 012506 310 MRKGLPILGVFRTF-AAVG---VDPA---------IMG-VG----------PAVAIPAAVKSAGLQLDDIDLFEINEAFA 365 (462)
Q Consensus 310 ~~~g~~~~~~i~g~-~~~~---~~p~---------~~~-~~----------~~~Ai~~aL~~AGl~~~DID~~eihdafa 365 (462)
+..++...... +... .-|. .+. .+ ...+++++|+++|++++|||+|-+|+++.
T Consensus 178 ---~~~i~~~~~~s~g~~~~~~~~~g~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~~~ 254 (323)
T 3il3_A 178 ---QEGIISTHLHASADKNNALVLAQPERGIEKSGYIEMQGNETFKLAVRELSNVVEETLLANNLDKKDLDWLVPHQANL 254 (323)
T ss_dssp ---SCCEEEEEEEECCCCSCSEECCCCCTTCSSCSCCEECHHHHHHHHHHHHHHHHHHHHHTTTCCTTTCCEEEECCSCH
T ss_pred ---CCCeEEEEEEEcCCCcceEEECCCCCCCCCCCcEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCH
Confidence 11222211111 0000 0010 000 01 13567889999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEE
Q 012506 366 SQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAV 435 (462)
Q Consensus 366 ~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v 435 (462)
.+...+.+.||++++++..+ .--+||...++-...+.+++.+-+-+.| ++.+... .|.|+.++.+
T Consensus 255 ~i~~~~~~~lgl~~ek~~~~--l~~~GNt~sasi~~~L~~~~~~g~~~~G--d~vll~~-~G~G~t~~~~ 319 (323)
T 3il3_A 255 RIITATAKKLEMDMSQVVVT--LDKYANNSAATVPVALDEAIRDGRIQRG--QLLLLEA-FGGGWTWGSA 319 (323)
T ss_dssp HHHHHHHHHTTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHTTSSCTT--CEEEEEE-EETTTEEEEE
T ss_pred HHHHHHHHHcCcCHHHhhcc--HhhcCchHHHHHHHHHHHHHHcCCCCCC--CEEEEEE-EehhheeEEE
Confidence 99999999999999987764 4458999999977766666543222233 4555543 5667666443
|
| >1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=6.5e-24 Score=213.88 Aligned_cols=245 Identities=20% Similarity=0.148 Sum_probs=182.2
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHH
Q 012506 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAA 150 (462)
Q Consensus 71 ~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~ 150 (462)
++.+..+|+.+|+++||+++|+++++||.+++|+..++.. .++.+..++..+|++ .+|+++++++|+|+++||..|++
T Consensus 56 ~~~~~~~la~~Aa~~al~~ag~~~~~id~vi~gt~~~~~~-~p~~a~~v~~~lgl~-~~~~~~v~~aCas~~~Al~~A~~ 133 (339)
T 1mzj_A 56 PDETIQVMGVAASRRALEHAGVDPAEIDLVVVSTMTNFVH-TPPLSVAIAHELGAD-NAGGFDLSAACAGFCHALSIAAD 133 (339)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCC-SSCHHHHHHHHHTCT-TCEEEEEECGGGHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCC-CChHHHHHHHHhCCC-CccEEEccccchHHHHHHHHHHH
Confidence 4778999999999999999999999999999999877664 567889999999996 48999999999999999999999
Q ss_pred HHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Q 012506 151 AIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 230 (462)
Q Consensus 151 ~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~ 230 (462)
+|++|.+|++||+|+|.++...
T Consensus 134 ~i~~G~~~~vLv~g~e~~s~~~---------------------------------------------------------- 155 (339)
T 1mzj_A 134 AVESGGSRHVLVVATERMTDVI---------------------------------------------------------- 155 (339)
T ss_dssp HHHHSSCSCEEEEEEEEGGGGS----------------------------------------------------------
T ss_pred HHHCCCCCEEEEEEEccccccc----------------------------------------------------------
Confidence 9999999999999999986410
Q ss_pred cCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHH
Q 012506 231 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 310 (462)
Q Consensus 231 ~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~ 310 (462)
+|. | + .+....+|||+|+||.+.+.
T Consensus 156 ----------------~~~-----------d--------------------~------~~~~~~GdGA~A~vL~~~~~-- 180 (339)
T 1mzj_A 156 ----------------DLA-----------D--------------------R------SLSFLFGDGAGAAVVGPSDV-- 180 (339)
T ss_dssp ----------------CSS-----------C--------------------T------TTTTTBCEEEEEEEEEEESS--
T ss_pred ----------------Ccc-----------c--------------------c------ccceEeccCceEEEEEecCC--
Confidence 000 0 0 01122689999999987642
Q ss_pred hcCCCceEEE-EEEEEec----cC---CCC-------------CC--------ccHHHHHHHHHHHcCCCCCCccEEEec
Q 012506 311 RKGLPILGVF-RTFAAVG----VD---PAI-------------MG--------VGPAVAIPAAVKSAGLQLDDIDLFEIN 361 (462)
Q Consensus 311 ~~g~~~~~~i-~g~~~~~----~~---p~~-------------~~--------~~~~~Ai~~aL~~AGl~~~DID~~eih 361 (462)
.++++.. .+.+... .. |.. .+ .....+++++|+++|++++|||+|++|
T Consensus 181 ---~~i~~~~~~~~g~~~~~~~~~g~~p~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~~did~v~~H 257 (339)
T 1mzj_A 181 ---PGIGPVVRGIDGTGLGSLHMSSSWDQYVEDPSVGRPALVMDGKRVFRWAVADVVPAAREALEVAGLTVGDLVAFVPH 257 (339)
T ss_dssp ---CCBCCCEEEECGGGGGGEEESCCHHHHTTCSSSCSCCEEECHHHHHHHHHHHHHHHHHHHHHTTTCCGGGCSEEEEC
T ss_pred ---CCeEEEEEEEcCCCCCeEEecCCCCCcccccccccceEEeeCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEC
Confidence 1233222 2211100 00 110 01 123568999999999999999999999
Q ss_pred CCCHHHHHHHHHHcCCCCC-CCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeE-EEEEEe
Q 012506 362 EAFASQFVYCRNKLGLDPE-KINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGA-AAVFER 438 (462)
Q Consensus 362 dafa~~~~~~~e~LGl~~~-~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~-A~v~~~ 438 (462)
.++......+.+.||++++ ++..+ .-.+||..+|++...+.+++.+-+-+.+ ++.|... .|.|+.. +++|+.
T Consensus 258 ~~~~~~~d~i~~~lg~~~~~~~~~~--~~~~Gn~~sAs~~~~L~~~~~~g~~~~G--~~vll~~-~G~G~t~~~~~l~~ 331 (339)
T 1mzj_A 258 QANLRIIDVLVDRLGVPEHVVVSRD--AEDTGNTSSASVALALDRLVRSGAVPGG--GPALMIG-FGAGLSYAGQALLL 331 (339)
T ss_dssp CSCHHHHHHHHHHHTCCTTSEECCT--HHHHCBCTTHHHHHHHHHHHHHTSSCTT--CEEEEEE-EETTTEEEEEEEEC
T ss_pred CCCHHHHHHHHHHhCCCccceeeeh--hhhcCchHHHHHHHHHHHHHHcCCCCCC--CEEEEEE-EchhheeEEEEEEe
Confidence 9999988888899999988 76433 4459999999999988887765333334 5666655 4555555 445543
|
| >2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.6e-23 Score=210.43 Aligned_cols=244 Identities=18% Similarity=0.192 Sum_probs=179.6
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHH
Q 012506 73 TYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAI 152 (462)
Q Consensus 73 ~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I 152 (462)
.+..+|+.+|+++||+++|+ ++||.|++++..++.. .+..+..++..+|++ .+|+++++++|+|+++||..|+++|
T Consensus 51 ~~~~~la~~Aa~~al~~ag~--~~id~vi~~t~~~~~~-~p~~a~~v~~~lgl~-~~~~~~v~~aCas~~~Al~~A~~~i 126 (331)
T 2x3e_A 51 LGSGDLALRAASAALASAGL--ERVDAVVLATSTGDFC-CPATAPRVAARLGLV-GALAFDLSAAATGFVYGLASVGSLI 126 (331)
T ss_dssp CCHHHHHHHHHHHHHHHHTC--SCCSEEEEECSSCSEE-ESCSHHHHHHHTTCT-TSEEEEEECGGGHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhCCc--ccCCEEEEEeCCCCCC-CChHHHHHHHHhCCC-CCcEEEEcCcChHHHHHHHHHHHHH
Confidence 67899999999999999999 8999999998877653 456789999999996 4899999999999999999999999
Q ss_pred HccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcC
Q 012506 153 KAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAG 232 (462)
Q Consensus 153 ~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g 232 (462)
++|.+|++||+|+|.++... .+ . .+
T Consensus 127 ~~g~~~~vLv~g~e~~s~~~-~~--------~-------------------------d~--------------------- 151 (331)
T 2x3e_A 127 SAGLADSALLVGVDTFSHTL-DP--------A-------------------------DR--------------------- 151 (331)
T ss_dssp HTTSCSEEEEEEEECGGGGS-CT--------T-------------------------CH---------------------
T ss_pred HcCCCCEEEEEEeeccccCC-Cc--------c-------------------------cc---------------------
Confidence 99999999999999986410 00 0 00
Q ss_pred CCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhc
Q 012506 233 KFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRK 312 (462)
Q Consensus 233 ~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~ 312 (462)
.++...+|||+|+||.+.+.| .
T Consensus 152 --------------------------------------------------------~~~~~~GdGA~A~vL~~~~~a--~ 173 (331)
T 2x3e_A 152 --------------------------------------------------------STRALFGDGAGAVVLRAGDAE--E 173 (331)
T ss_dssp --------------------------------------------------------HHHHHBCCEEEEEEEEEECTT--S
T ss_pred --------------------------------------------------------ccceeeccccEEEEEEecCCC--C
Confidence 000115899999999876644 1
Q ss_pred CCCceEEEEEEEEeccC----CC---------------CC-C--------ccHHHHHHHHHHHcCCCCCCccEEEecCCC
Q 012506 313 GLPILGVFRTFAAVGVD----PA---------------IM-G--------VGPAVAIPAAVKSAGLQLDDIDLFEINEAF 364 (462)
Q Consensus 313 g~~~~~~i~g~~~~~~~----p~---------------~~-~--------~~~~~Ai~~aL~~AGl~~~DID~~eihdaf 364 (462)
+.++++..........+ |. .+ + .....+++++|+++|++++|||+|.+|.++
T Consensus 174 ~~~i~~~~~~~dg~~~~~~~~p~~~~~~p~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~~did~~~~H~~~ 253 (331)
T 2x3e_A 174 EGALLAFDLGSDGHQFDLLMTPAVSRAERSSGQASNYFRMDGKAVFGQAVTQMSDSVRRVLDRVGWQASDLHHLVPHQAN 253 (331)
T ss_dssp TTBEEEEEEEECGGGTTSEEEECCCHHHHHHTCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCCC
T ss_pred CCceEEEEEEEcCCCCCeEEecCCCCCCCCccCcCceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCC
Confidence 22333322111000000 10 00 1 123568999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeE-EEEEEe
Q 012506 365 ASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGA-AAVFER 438 (462)
Q Consensus 365 a~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~-A~v~~~ 438 (462)
......+.+.||++++++..+ .-.+||+.+|+....+.+++.+-+-+.+ ++.|... .|.|+.. +++|+-
T Consensus 254 ~~~~d~~~~~lg~~~~~~~~~--~~~~Gnt~sAs~~~~L~~~~~~~~~~~G--~~vll~~-~G~G~~~~~~~l~~ 323 (331)
T 2x3e_A 254 TRILAAVADQLDLPVERVVSN--IAEVGNTVAASIPLALAHGLRQGILRDG--GNMVLTG-FGAGLTWGSVALRW 323 (331)
T ss_dssp HHHHHHHHHHHTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHTTCSCTT--CEEEEEE-EETTTEEEEEEEEC
T ss_pred HHHHHHHHHHcCCCHHHHhhh--HhhhCcHHHHHHHHHHHHHHHhCCCCCC--CEEEEEE-EeHHhhheeeEEEE
Confidence 999888899999998877653 3459999999998888877765333334 6666665 4555555 445543
|
| >4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.91 E-value=5.3e-23 Score=208.70 Aligned_cols=246 Identities=15% Similarity=0.088 Sum_probs=184.4
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHH
Q 012506 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAA 150 (462)
Q Consensus 71 ~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~ 150 (462)
++.++.+|+.+|+++||+++|+++++||.|++++..++.. .+..+..++..+|+|.++++++++.+|+|+++||..|++
T Consensus 62 ~~~~~~~La~~Aa~~aL~~agi~~~~Id~vi~~t~~~~~~-~p~~a~~v~~~lGl~~~~~~~~v~~aC~s~~~al~~A~~ 140 (354)
T 4efi_A 62 AQTSAGDLCRKAGEKLLAGLGWQADSIDALIFVSQTPNYR-LPATAFVLQAELDLPASCLALDINLGCSGYPQALWLGMN 140 (354)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCS-SSCHHHHHHHHTTCCTTSEEEEECCCTTHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CCcHHHHHHHHcCcCCCccEEeeCcccHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999887665 678899999999997689999999999999999999999
Q ss_pred HHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Q 012506 151 AIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 230 (462)
Q Consensus 151 ~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~ 230 (462)
+|++|.++++|++|+|.+|....
T Consensus 141 ~i~~g~~~~vLvvg~e~~s~~~~--------------------------------------------------------- 163 (354)
T 4efi_A 141 LIQTGAAKRVLLAVGDTISKMID--------------------------------------------------------- 163 (354)
T ss_dssp HHHTTSCSEEEEEEEECGGGGCC---------------------------------------------------------
T ss_pred HHHCCCCCEEEEEEechhcccCC---------------------------------------------------------
Confidence 99999999999999999976210
Q ss_pred cCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHH
Q 012506 231 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 310 (462)
Q Consensus 231 ~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~ 310 (462)
+. | ...+...+|||+|+||.+.+..
T Consensus 164 -----------------~~-----------d--------------------------~~~~~lfGDGA~A~vl~~~~~~- 188 (354)
T 4efi_A 164 -----------------PT-----------D--------------------------RSTSLLFGDAGTMTALETSNGD- 188 (354)
T ss_dssp -----------------TT-----------C--------------------------HHHHTTBCCEEEEEEEEECCSC-
T ss_pred -----------------cc-----------c--------------------------cccccccccceeEEEEeecCCC-
Confidence 00 0 0001125899999999875421
Q ss_pred hcCCCceEE-EEEEEEe---------ccCCC--------------CCCc-c----------HHHHHHHHHHHcCCCCCCc
Q 012506 311 RKGLPILGV-FRTFAAV---------GVDPA--------------IMGV-G----------PAVAIPAAVKSAGLQLDDI 355 (462)
Q Consensus 311 ~~g~~~~~~-i~g~~~~---------~~~p~--------------~~~~-~----------~~~Ai~~aL~~AGl~~~DI 355 (462)
..+.. +...+.. +..|. .+.. + ...+++++|+++|++++||
T Consensus 189 ----~~~~~~~~s~g~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~di 264 (354)
T 4efi_A 189 ----AAAHFIIGADGKGARNLIVPSGGFKPYDAAADERMAGKSPECLFMDGGEIFNFTLNAVPKLVSRTLDIAGRDKDSY 264 (354)
T ss_dssp ----CEEEEEEEECGGGGGGEECCSSSSSCCCGGGCGGGTTCCTTSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGC
T ss_pred ----CceEEEEEEcCCCcceEEecCCCCCCCccccccccccccccceEEccHHHHHHHHHHHHHHHHHHHHHcCCCHHHC
Confidence 12211 1111100 00010 0000 1 1346789999999999999
Q ss_pred cEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEE-
Q 012506 356 DLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAA- 434 (462)
Q Consensus 356 D~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~- 434 (462)
|+|-+|+++..+...+.+.||++++++..+ .--+||...++-...+.+++.+-+-+.+ ++.+... .|.|+.++.
T Consensus 265 d~~v~Hq~~~~i~~~~~~~Lgl~~ek~~~~--l~~~GNt~sasi~~~L~~~~~~g~~~~G--d~vll~~-fG~G~t~~~~ 339 (354)
T 4efi_A 265 DAFLFHQANLFMLKHLAKKAGLPAERVPVN--IGEYGNTSCASIPLLITTELKDRLKEET--LQLGMFG-FGVGYSWASA 339 (354)
T ss_dssp SEEEECCCCHHHHHHHHHHTTCCGGGSCCC--HHHHCBCGGGHHHHHHHHHSHHHHHHSC--EEEEEEE-EETTTEEEEE
T ss_pred CEEEeCCCCHHHHHHHHHHhCcCHHHHHHH--HhhhCcHHHHHHHHHHHHHHHhCCCCCC--CEEEEEE-Echhhhheee
Confidence 999999999999999999999999987654 4559999999988888888766444444 4555544 566777654
Q ss_pred EEEe
Q 012506 435 VFER 438 (462)
Q Consensus 435 v~~~ 438 (462)
+|+-
T Consensus 340 ll~~ 343 (354)
T 4efi_A 340 ALAV 343 (354)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4443
|
| >3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A | Back alignment and structure |
|---|
Probab=99.90 E-value=7.7e-23 Score=206.73 Aligned_cols=259 Identities=14% Similarity=0.155 Sum_probs=183.3
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHH
Q 012506 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAA 150 (462)
Q Consensus 71 ~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~ 150 (462)
++.++.+|+.+|+++||+++|+++++||.|++++..++.. .+..+..++..+|++.++++++++.+|+|+++||..|++
T Consensus 64 ~~~~~~~La~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~-~p~~a~~v~~~lGl~~~~~~~~v~~aC~s~~~al~~A~~ 142 (345)
T 3s21_A 64 QDVQASDAATQAARKALIDANIGIEKIGLLINTSVSRDYL-EPSTASIVSGNLGVSDHCMTFDVANACLAFINGMDIAAR 142 (345)
T ss_dssp SCCCHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCCSCS-SSCHHHHHHHHHTCCTTCEEEECCCGGGHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CChHHHHHHHHhCCCCCceEEeECCcCHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999887665 567899999999997679999999999999999999999
Q ss_pred HHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Q 012506 151 AIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 230 (462)
Q Consensus 151 ~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~ 230 (462)
+|++|.++++||+|+|.||.. .+ ....++
T Consensus 143 ~i~~g~~~~vLvvg~e~~s~~------------~~------------~~~~~~--------------------------- 171 (345)
T 3s21_A 143 MLERGEIDYALVVDGETANLV------------YE------------KTLERM--------------------------- 171 (345)
T ss_dssp HHHHTSCSEEEEEEEECCHHH------------HH------------HHHHHH---------------------------
T ss_pred HHHCCCCCEEEEEEEcccchh------------hc------------cccccc---------------------------
Confidence 999999999999999998751 00 000000
Q ss_pred cCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHH
Q 012506 231 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 310 (462)
Q Consensus 231 ~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~ 310 (462)
+ .| + .+.+. |+. ..+....+|||+|+||.+.+...
T Consensus 172 ---~------------~~-------------~-----~~~~~-------f~~-----~~~~~~~GdGA~A~vl~~~~~~~ 206 (345)
T 3s21_A 172 ---T------------SP-------------D-----VTEEE-------FRN-----ELAALTLGCGAAAMVMARSELVP 206 (345)
T ss_dssp ---T------------CT-------------T-----CCHHH-------HHH-----HHGGGGBCCEEEEEEEEEGGGST
T ss_pred ---c------------CC-------------c-----cchhh-------hhh-----hccceeeccceeEEEEecCCCCC
Confidence 0 00 0 00000 100 00112369999999999865321
Q ss_pred hcCCCceEEEEEEEEecc----C---C--C--CCC-c--------cHHHHHHHHHHHcCCCCCCccEEEecCCCHHHHHH
Q 012506 311 RKGLPILGVFRTFAAVGV----D---P--A--IMG-V--------GPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVY 370 (462)
Q Consensus 311 ~~g~~~~~~i~g~~~~~~----~---p--~--~~~-~--------~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~ 370 (462)
. +. .+.+...... + + . .|. . ....+++++|+++|++++|||+|.+|+++..+...
T Consensus 207 ~-~~----~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~~~~i~~~ 281 (345)
T 3s21_A 207 D-AP----RYKGGVTRSATEWNKLCRGNLDRMVTDTRLLLIEGIKLAQKTFVAAKQVLGWAVEELDQFVIHQVSRPHTAA 281 (345)
T ss_dssp T-SC----EEEEEEEEECGGGTTC-----------CHHHHHHHHHHHHHHHHHHHHHHCCCGGGCSEEEECCSCHHHHHH
T ss_pred C-Cc----ceeeeccccCcchhhhccccCcceEEcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCCHHHHHH
Confidence 0 11 2333332211 0 0 0 011 0 11356778999999999999999999999999999
Q ss_pred HHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEE
Q 012506 371 CRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVF 436 (462)
Q Consensus 371 ~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~ 436 (462)
+.+.||++++++..+ .--+||...|+-...+.+++.+-+-+.+ ++.+... .|.|+.++.++
T Consensus 282 ~~~~lgl~~ek~~~~--l~~~GNt~sasi~~~L~~~~~~g~~~~G--d~vll~~-~G~G~t~~~~~ 342 (345)
T 3s21_A 282 FVKSFGIDPAKVMTI--FGEHGNIGPASVPIVLSKLKELGRLKKG--DRIALLG-IGSGLNCSMAE 342 (345)
T ss_dssp HHHHHTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHHTCCCTT--CEEEEEE-EETTTEEEEEE
T ss_pred HHHHcCcCHHHceee--HhhcCchHHHHHHHHHHHHHHcCCCCCC--CEEEEEE-EChhhhheEEE
Confidence 999999999887543 3458999999988877777765322334 5555544 56676665443
|
| >1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=3e-24 Score=220.04 Aligned_cols=248 Identities=13% Similarity=0.094 Sum_probs=179.9
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEe-cCCCchHHHHHHHHHH
Q 012506 72 DTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTV-NRQCSSGLQAVADVAA 150 (462)
Q Consensus 72 d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v-~~~CsSgl~Ai~~Aa~ 150 (462)
+.+..+|+.+|+++||+++|+++++||.|++++..+. . .+..+..++..+|++..++++++ +.+|+|+++||..|++
T Consensus 81 ~~~~~~la~~Aa~~aL~~agl~~~~id~vi~~t~~~~-~-~p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~Al~~A~~ 158 (382)
T 1u0m_A 81 EREAKSRVPAVIQRALDDAELLATDIDVIIYVSCTGF-M-MPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHD 158 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSSC-C-SSCHHHHHHHHTTCCTTCEEEEECSCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEEecCCC-C-CCcHHHHHHHHhCCCCCcceEEccCCcCHHHHHHHHHHHH
Confidence 4567899999999999999999999999999988763 2 56788999999999755799999 9999999999999999
Q ss_pred HHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Q 012506 151 AIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 230 (462)
Q Consensus 151 ~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~ 230 (462)
+|++|.++++||+|+|.++...... + ..+
T Consensus 159 ~i~~g~~~~vLv~g~e~~s~~~~~~---------------d-----------------~~~------------------- 187 (382)
T 1u0m_A 159 FCTAYPEANALIVACEFCSLCYQPT---------------D-----------------LGV------------------- 187 (382)
T ss_dssp HHHHSTTCEEEEEEEEEGGGGCCTT---------------C-----------------CSH-------------------
T ss_pred HHHcCCCCEEEEEEEeccchhcCcc---------------c-----------------CCH-------------------
Confidence 9999999999999999986511000 0 000
Q ss_pred cCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHH
Q 012506 231 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 310 (462)
Q Consensus 231 ~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~ 310 (462)
+ +..+....+|||+|+||.+.+.
T Consensus 188 ----------------------------------------~---------------~~~~~~lfGDGA~A~vL~~~~~-- 210 (382)
T 1u0m_A 188 ----------------------------------------G---------------SLLCNGLFGDGIAAAVVRGRGG-- 210 (382)
T ss_dssp ----------------------------------------H---------------HHHHHHHBCEEEEEEEEETTTC--
T ss_pred ----------------------------------------H---------------HhhccchhcCCcEEEEEeccCC--
Confidence 0 0000112589999999987642
Q ss_pred hcCCCceEEEEEEEEe--cc------------------CCCCC---CccHHHHHHHHHHHcCCCCCCccEEEecCCCHHH
Q 012506 311 RKGLPILGVFRTFAAV--GV------------------DPAIM---GVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ 367 (462)
Q Consensus 311 ~~g~~~~~~i~g~~~~--~~------------------~p~~~---~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~ 367 (462)
.+ .+|.++... .. .++.+ ..+.. +++++|+++|++++|||+|++|+++..+
T Consensus 211 -~g----~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~-~i~~aL~~agl~~~dId~v~~H~~~~~i 284 (382)
T 1u0m_A 211 -TG----VRLERNGSYLIPKTEDWIMYDVKATGFHFLLDKRVPATMEPLAP-ALKELAGEHGWDASDLDFYIVHAGGPRI 284 (382)
T ss_dssp -SE----EEEEEEEEEECSSCTTTEEEEEETTEEEEEECTTTGGGHHHHHH-HHHHHHHTTSCCSSCCSCCEEECSHHHH
T ss_pred -CC----cEEEEeeeEecCChHHhcCceecCCceEEEeCcHHHHHHHHHHH-HHHHHHHHcCCCHHHCCEEEECCCCHHH
Confidence 12 234443321 00 00111 11234 8999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCC-CccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEE-EEEEe
Q 012506 368 FVYCRNKLGLDPEKINVNG-GALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAA-AVFER 438 (462)
Q Consensus 368 ~~~~~e~LGl~~~~vn~~G-G~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A-~v~~~ 438 (462)
...+.+.||+++++++++. -.-.+||+.+++....+.+++.+-+-+.| ++.|... .|.|+.++ ++|+.
T Consensus 285 ~d~~~~~lgl~~~k~~~s~~~~~~~Gnt~sAsi~~~L~~~~~~g~~~~G--d~vll~~-~G~G~t~~~~vl~~ 354 (382)
T 1u0m_A 285 LDDLSTFLEVDPHAFRFSRATLTEYGNIASAVVLDALRRLFDEGGVEEG--ARGLLAG-FGPGITAEMSLGCW 354 (382)
T ss_dssp HHHHHHHSCSCGGGGHHHHHHHHHTCBCTTHHHHHHHHHHHHSCCCCSS--CCCEEEE-EETTTEEEEEEEEE
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHhcCCCCC--CEEEEEE-EcccceeEEEEEEE
Confidence 8889999999999876531 12348999999988888777765332333 4555543 56666654 45544
|
| >3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A | Back alignment and structure |
|---|
Probab=99.90 E-value=8.3e-23 Score=208.09 Aligned_cols=246 Identities=16% Similarity=0.111 Sum_probs=179.3
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHH
Q 012506 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAA 150 (462)
Q Consensus 71 ~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~ 150 (462)
++.++.+|+.+|+++||+++|+++++||.|++++..++.. .+..++.++..+|++.++++++++.+|+|+++||..|++
T Consensus 76 ~~~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~-~p~~a~~v~~~lGl~~~~~~~~v~~~C~s~~~Al~~A~~ 154 (365)
T 3gwa_A 76 PRETAADLAYEAARKLFAQGAVGADQVDFVILCTQAPDYV-LPTSACMLQHRLGIPTHAGALDVNLGCSGYVYGLSLAKG 154 (365)
T ss_dssp TTCCHHHHHHHHHHHHHHTTSCCGGGCCEEEEEESSCSCS-BSCHHHHHHHHTTCCTTSEEEEEECSTTHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CCcHHHHHHHHcCCCCCceEEEecccChHHHHHHHHHHH
Confidence 4689999999999999999999999999999999887665 677899999999997679999999999999999999999
Q ss_pred HHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Q 012506 151 AIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 230 (462)
Q Consensus 151 ~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~ 230 (462)
+|++|.+++||++|+|+||....
T Consensus 155 ~i~~g~~~~vLvvg~e~~s~~~~--------------------------------------------------------- 177 (365)
T 3gwa_A 155 LVETGAARCVLLLTADTYSKYLH--------------------------------------------------------- 177 (365)
T ss_dssp HHHTTSCSEEEEEEEECGGGGSC---------------------------------------------------------
T ss_pred HHHcCCCCEEEEEEEchhhccCC---------------------------------------------------------
Confidence 99999999999999999986210
Q ss_pred cCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHH
Q 012506 231 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 310 (462)
Q Consensus 231 ~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~ 310 (462)
|. | ...+...+|||+|+||.+.+...
T Consensus 178 -----------------~~-----------d--------------------------r~~~~lfGDGAaA~vl~~~~~~~ 203 (365)
T 3gwa_A 178 -----------------PL-----------D--------------------------KSVRTLFGDGASATAVIAEHGEL 203 (365)
T ss_dssp -----------------TT-----------C--------------------------HHHHTTBCCEEEEEEEEEECSSS
T ss_pred -----------------cc-----------c--------------------------ccccccccceeEEEEEEecCCCC
Confidence 00 0 00011258999999998754210
Q ss_pred hcCCCceEEEEEEEEe----------c-cCCCC-------------------CC-cc----------HHHHHHHHHHHcC
Q 012506 311 RKGLPILGVFRTFAAV----------G-VDPAI-------------------MG-VG----------PAVAIPAAVKSAG 349 (462)
Q Consensus 311 ~~g~~~~~~i~g~~~~----------~-~~p~~-------------------~~-~~----------~~~Ai~~aL~~AG 349 (462)
..++......... + ..|.. +- .+ ...+++++|+++|
T Consensus 204 ---~~i~~~~~~s~g~~~~~~~~~~gg~~~p~~~~~~~~~~~~~~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~~L~~~g 280 (365)
T 3gwa_A 204 ---ERIGPFVFGTDGRGAPNLIVKAGLFREPKSADSAREHEDASGNVRTDEHLYMNGAEVMAFSLAEVPRAADRLLALAG 280 (365)
T ss_dssp ---CSEEEEEEEECGGGGGGEEECSSSSSSCCCTGGGCCEECTTSCEECTTSEEECHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ---CceEEEEEEEcCCCCCeEEecCCCcCCCCcccccccccccccccccccceEeccHHHHHHHHHHHHHHHHHHHHHcC
Confidence 0122111111000 0 01100 00 01 1357789999999
Q ss_pred CCCCCccEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccc
Q 012506 350 LQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTG 429 (462)
Q Consensus 350 l~~~DID~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G 429 (462)
++++|||+|-+|+++......+.+.||++++++..+ .--+||..+|+-...+.+++.+-+-+.| ++.|... .|.|
T Consensus 281 l~~~did~~v~Hq~n~~i~~~~~~~Lgl~~ek~~~~--l~~~GNtssAsipl~L~~~~~~g~~~~G--d~vll~~-fG~G 355 (365)
T 3gwa_A 281 EPRENIDCFVLHQANRFMLDALRKKMKIPEHKFPVL--MEHCGNTVSSTLPLALETMRANGTLARG--MRLMLLG-FGVG 355 (365)
T ss_dssp CCGGGCSEEEECCCCHHHHHHHHHHHTCCGGGSCCC--CTTTCBCGGGHHHHHHHHHHHTTCCCTT--CEEEEEE-EETT
T ss_pred CCHHHCCEEEEcCCCHHHHHHHHHHhCCCHHHHHHH--HhcccchHHHHHHHHHHHHHHcCCCCCC--CEEEEEE-Eehh
Confidence 999999999999999999999999999999987654 3348999988866666555544222223 5555544 5667
Q ss_pred eeEEEEE
Q 012506 430 MGAAAVF 436 (462)
Q Consensus 430 ~g~A~v~ 436 (462)
+..+.++
T Consensus 356 ~t~~~~l 362 (365)
T 3gwa_A 356 YSWAGCL 362 (365)
T ss_dssp TEEEEEE
T ss_pred heeEEEE
Confidence 6664433
|
| >2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.90 E-value=8.1e-24 Score=216.01 Aligned_cols=246 Identities=15% Similarity=0.098 Sum_probs=178.3
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEec-CCCchHHHHHHHHHHH
Q 012506 73 TYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADVAAA 151 (462)
Q Consensus 73 ~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~-~~CsSgl~Ai~~Aa~~ 151 (462)
.+..+|+.+|+++||+++|+++++||.+++++..+.. .+..+..++..+|++..+++++++ .+|+|+++||..|+++
T Consensus 93 ~~~~~la~~Aa~~al~~ag~~~~~id~vi~~t~~~~~--~p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~al~~A~~~ 170 (374)
T 2h84_A 93 KVVPDLAQQACLRALKDWGGDKGDITHIVSVTSTGII--IPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASL 170 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCC--SSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCCCC--CCcHHHHHHHHcCcCCCCceEEecCCcCHHHHHHHHHHHHH
Confidence 5678999999999999999999999999999887532 567889999999996457999997 8999999999999999
Q ss_pred HHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHc
Q 012506 152 IKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAA 231 (462)
Q Consensus 152 I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~ 231 (462)
|++|.++++||+|+|.++...+.+ -.+
T Consensus 171 i~~g~~~~vLv~g~e~~s~~~~~~---------------------------------~dr-------------------- 197 (374)
T 2h84_A 171 AKASPRNRILVVCTEVCSLHFSNT---------------------------------DGG-------------------- 197 (374)
T ss_dssp HTTCTTCEEEEEEEECCGGGCCCS---------------------------------SSH--------------------
T ss_pred HHcCCCCEEEEEEEEecchhhcCC---------------------------------CCH--------------------
Confidence 999999999999999987521100 000
Q ss_pred CCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHh
Q 012506 232 GKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMR 311 (462)
Q Consensus 232 g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~ 311 (462)
+ +..++...+|||+|+||.+.+.+++
T Consensus 198 ---------------------------------------~---------------~~~~~~lfGDGA~A~vL~~~~~~~~ 223 (374)
T 2h84_A 198 ---------------------------------------D---------------QMVASSIFADGSAAYIIGCNPRIEE 223 (374)
T ss_dssp ---------------------------------------H---------------HHHHHHHBCCEEEEEEEESSCCTTC
T ss_pred ---------------------------------------H---------------HHhhhhhhccCcEEEEEecCCCccc
Confidence 0 0000112589999999998765432
Q ss_pred cCCCceEEEEEEEEeccC-----------CCC----CC--------ccHHHHHHHHHHHcC------CCCCCccEEEecC
Q 012506 312 KGLPILGVFRTFAAVGVD-----------PAI----MG--------VGPAVAIPAAVKSAG------LQLDDIDLFEINE 362 (462)
Q Consensus 312 ~g~~~~~~i~g~~~~~~~-----------p~~----~~--------~~~~~Ai~~aL~~AG------l~~~DID~~eihd 362 (462)
.+ ++ ++.+++..... ++- ++ .....+++++|+++| ++++|||+| +|+
T Consensus 224 ~~--~~-~l~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~ag~~~~~~l~~~did~~-~H~ 299 (374)
T 2h84_A 224 TP--LY-EVMCSINRSFPNTENAMVWDLEKEGWNLGLDASIPIVIGSGIEAFVDTLLDKAKLQTSTAISAKDCEFL-IHT 299 (374)
T ss_dssp CC--CE-EEEEEEEEECSSCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHHTTTSCSCCCSSSSEEE-ECC
T ss_pred CC--ce-eEEeeeeEEeCCCcccceeEEecCcEEEEeCchHHHHHHHHHHHHHHHHHHhcCCccccCCChhhcCEe-ECC
Confidence 22 23 56665432110 000 00 123468889999999 999999999 999
Q ss_pred CCHHHHHHHHHHcCCCCCCCCCC-CCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEE
Q 012506 363 AFASQFVYCRNKLGLDPEKINVN-GGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVF 436 (462)
Q Consensus 363 afa~~~~~~~e~LGl~~~~vn~~-GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~ 436 (462)
++..+...+.+.||++++++.++ --.-.+||+..++-...+.+++.+-+ .| ++.+.. +.|+|+.++.++
T Consensus 300 ~~~~i~d~~~~~lgl~~~k~~~s~~~~~~~Gnt~sasi~~~L~~~~~~~~--~G--d~vll~-~~G~G~t~~~~l 369 (374)
T 2h84_A 300 GGKSILMNIENSLGIDPKQTKNTWDVYHAYGNMSSASVIFVMDHARKSKS--LP--TYSISL-AFGPGLAFEGCF 369 (374)
T ss_dssp CCHHHHHHHHHHTTCCGGGGHHHHHHHHHHCBCTTHHHHHHHHHHHTCSC--CC--SEEEEE-EEETTTEEEEEE
T ss_pred CCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHHHHHHHhhcC--CC--CeEEEE-Eeccchhhhhhh
Confidence 99999888999999999987632 11234788888886666666654422 23 555554 467777775533
|
| >3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2.4e-22 Score=204.23 Aligned_cols=248 Identities=17% Similarity=0.170 Sum_probs=182.4
Q ss_pred CCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHH
Q 012506 70 FKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVA 149 (462)
Q Consensus 70 ~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa 149 (462)
.++.++.+|+.+|+++||+++|+++++||.|++++..++.. .+..+..++..+|++ ++++++++.+|+|+++||..|+
T Consensus 69 ~~~~~~~~La~~Aa~~aL~~agl~~~dId~vi~~t~~~~~~-~p~~a~~v~~~lGl~-~~~~~~v~~aC~s~~~Al~~A~ 146 (359)
T 3h78_A 69 EPEQAVSALMVPAARQAIEAAGLLPEDIDLLLVNTLSPDHH-DPSQACLIQPLLGLR-HIPVLDIRAQASGLLYGLQMAR 146 (359)
T ss_dssp CTTCCTHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSCSSS-BSCHHHHHHHHHTCC-SCCEEEEECGGGHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeCCCCCC-CCcHHHHHHHHcCCC-CCcEEEECCHhHHHHHHHHHHH
Confidence 35789999999999999999999999999999999887665 677899999999996 7899999999999999999999
Q ss_pred HHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH
Q 012506 150 AAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAAT 229 (462)
Q Consensus 150 ~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~ 229 (462)
.+|++|.++++|++|+|.||....
T Consensus 147 ~~i~sG~~~~vLvvg~e~~S~~~~-------------------------------------------------------- 170 (359)
T 3h78_A 147 GQILAGLARHVLVVCGEVLSKRMD-------------------------------------------------------- 170 (359)
T ss_dssp HHHHTTSCSEEEEEEEEECGGGCC--------------------------------------------------------
T ss_pred HHHHCCCcCEEEEEEEchhcccCC--------------------------------------------------------
Confidence 999999999999999999976210
Q ss_pred HcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHH
Q 012506 230 AAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVA 309 (462)
Q Consensus 230 ~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A 309 (462)
+. |+ ....+...+|||+|+||.+.+.
T Consensus 171 ------------------~~-----------d~------------------------~~~t~~lfGDGAaA~vl~~~~~- 196 (359)
T 3h78_A 171 ------------------CS-----------DR------------------------GRNLSILLGDGAGAVVVSAGES- 196 (359)
T ss_dssp ------------------CS-----------TT------------------------THHHHTTBCEEEEEEEEECCSC-
T ss_pred ------------------cc-----------cc------------------------cccccceecceeEEEEEEecCC-
Confidence 00 00 0001122599999999987542
Q ss_pred HhcCCCceEEEEEEEEec-----cC-------C--------C---CCC-cc----------HHHHHHHHHHHcCCCCCCc
Q 012506 310 MRKGLPILGVFRTFAAVG-----VD-------P--------A---IMG-VG----------PAVAIPAAVKSAGLQLDDI 355 (462)
Q Consensus 310 ~~~g~~~~~~i~g~~~~~-----~~-------p--------~---~~~-~~----------~~~Ai~~aL~~AGl~~~DI 355 (462)
.+..++.......... .+ | . .+. .+ ...+++++|+++|++++||
T Consensus 197 --~~~~i~~~~~~s~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~~L~~~gl~~~di 274 (359)
T 3h78_A 197 --LEDGLLDLRLGADGNYFDLLMTAAPGSASPTFLDENVLREGGGEFLMRGRPMFEHASQTLVRIAGEMLAAHELTLDDI 274 (359)
T ss_dssp --SSSEEEEEEEEECGGGGGGEEBCCSSTTSSSTTCHHHHHTTTTSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGC
T ss_pred --CCCceEEEEEEEccCccceEEeCCCCCccCCccccccccccCCceEeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHC
Confidence 0111221111110000 01 1 0 000 01 1357789999999999999
Q ss_pred cEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEE-E
Q 012506 356 DLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAA-A 434 (462)
Q Consensus 356 D~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A-~ 434 (462)
|+|-+|+++..+...+.+.||++++++..+ .--+||...|+-...+.+++.++ +.+ ++.|... .|.|+.++ +
T Consensus 275 d~~v~Hq~n~~i~~~~~~~lgl~~ek~~~~--l~~~GNt~sAsi~l~L~~~~~~l--~~G--d~vll~~-fG~G~t~~~~ 347 (359)
T 3h78_A 275 DHVICHQPNLRILDAVQEQLGIPQHKFAVT--VDRLGNMASASTPVTLAMFWPDI--QPG--QRVLVLT-YGSGATWGAA 347 (359)
T ss_dssp SEEEECCSCHHHHHHHHHHHTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHGGGS--CTT--CEEEEEE-EETTTEEEEE
T ss_pred CEEEECCCCHHHHHHHHHHhCcCHHHhhhh--hhcccchHHHHHHHHHHHHHHhC--CCC--CEEEEEE-Echhhhheee
Confidence 999999999999999999999999987765 44589999999877777777662 223 4555543 56676664 4
Q ss_pred EEEe
Q 012506 435 VFER 438 (462)
Q Consensus 435 v~~~ 438 (462)
+|+-
T Consensus 348 ll~~ 351 (359)
T 3h78_A 348 LYRK 351 (359)
T ss_dssp EEEC
T ss_pred eEEe
Confidence 5554
|
| >1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A | Back alignment and structure |
|---|
Probab=99.89 E-value=8.4e-24 Score=217.48 Aligned_cols=252 Identities=17% Similarity=0.183 Sum_probs=182.0
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEe-cCCCchHHHHHHHHHHH
Q 012506 73 TYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTV-NRQCSSGLQAVADVAAA 151 (462)
Q Consensus 73 ~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v-~~~CsSgl~Ai~~Aa~~ 151 (462)
.+..+|+.+|+++||+++|+++++||.+++++..+. . .+..+..++..+|++..++.+++ +.+|+|+++||..|+++
T Consensus 111 ~~~~~la~~Aa~~aL~~agl~~~~Id~vi~~t~~~~-~-~p~~a~~v~~~lGl~~~~~~~~v~~~aCas~~~Al~~A~~~ 188 (393)
T 1ted_A 111 EHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGF-I-APGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNY 188 (393)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESSCC-C-SSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCC-c-cChHHHHHHHHcCcCCCcceeEeccchhHHHHHHHHHHHHH
Confidence 577899999999999999999999999999998773 3 56788999999999755778998 99999999999999999
Q ss_pred HHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHc
Q 012506 152 IKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAA 231 (462)
Q Consensus 152 I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~ 231 (462)
|++|.+|++||+|+|.++.... + +..+..
T Consensus 189 i~~G~~~~vLv~g~e~~s~~~~-~--------------------------------~~~r~~------------------ 217 (393)
T 1ted_A 189 VRAHPAMKALVVCIELCSVNAV-F--------------------------------ADDIND------------------ 217 (393)
T ss_dssp HHHSTTCEEEEEEEEECGGGCC-C--------------------------------CSSHHH------------------
T ss_pred HHcCCCCEEEEEEEEeccccCC-C--------------------------------CCCHHH------------------
Confidence 9999999999999999875210 0 000000
Q ss_pred CCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHh
Q 012506 232 GKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMR 311 (462)
Q Consensus 232 g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~ 311 (462)
...+...+|||+|+||.+.+.+..
T Consensus 218 --------------------------------------------------------~~~~~lfGDGA~A~vL~~~~~~~~ 241 (393)
T 1ted_A 218 --------------------------------------------------------VVIHSLFGDGCAALVIGASQVQEK 241 (393)
T ss_dssp --------------------------------------------------------HHHHHHBCEEEEEEEEEEECTTSC
T ss_pred --------------------------------------------------------hhhhhhhcCccEEEEEecCCCccc
Confidence 000112589999999987654321
Q ss_pred cCCCceEEEEEEEEec-cCC-CC-------------CC--------ccHHHHHHHHHHHcCCCCCCccEEEecCCCHHHH
Q 012506 312 KGLPILGVFRTFAAVG-VDP-AI-------------MG--------VGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQF 368 (462)
Q Consensus 312 ~g~~~~~~i~g~~~~~-~~p-~~-------------~~--------~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~ 368 (462)
.+ ..+.++.+++... .+. .. .+ .....+++++|+++|++++|||+|.+|+++..+.
T Consensus 242 ~~-~~~~~i~~~~~~~~~d~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~~dId~~~~H~~~~~i~ 320 (393)
T 1ted_A 242 LE-PGKVVVRSSFSQLLDNTEDGIVLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQISDIDLWAIHPGGPKII 320 (393)
T ss_dssp CC-TTCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTTCCGGGCSCEEECCSCHHHH
T ss_pred cC-cceeeeeccceEEcCCchhhccceecCCCeEEecCchHHHHHHHHHHHHHHHHHHHcCCCHhHCCEEEECCCcHHHH
Confidence 22 2445677764431 111 00 11 1234678999999999999999999999999998
Q ss_pred HHHHHHcCCCCCCCCCC-CCccccCCccchHHHHHHHHHHHHHHh-cCCCCcEEEEEeecccceeEEE-EEE
Q 012506 369 VYCRNKLGLDPEKINVN-GGALAIGHPLGTTGARCVATLLHEMKR-RGRDCRFGVISMCIGTGMGAAA-VFE 437 (462)
Q Consensus 369 ~~~~e~LGl~~~~vn~~-GG~~a~Ghp~gatG~~~~~~~~~qL~~-~~~~~~~gl~~~~~G~G~g~A~-v~~ 437 (462)
..+.+.||++++++.++ --.-.+||+.+++-...+.+++.+-+- +.+ ++.|.. ..|+|+..+. +|+
T Consensus 321 d~~~~~lgl~~~k~~~s~~~~~~~GNt~sAsi~~~L~~~~~~g~~~~~G--d~vll~-~~G~G~t~~~~~l~ 389 (393)
T 1ted_A 321 EQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMVQQAESAKAI--STGVAF-AFGPGVTVEGMLFD 389 (393)
T ss_dssp HHHHHHHTCCGGGGHHHHHHHHHHCBCTHHHHHHHHHHHHHSCSSSSSS--EEEEEE-EEETTTEEEEEEEE
T ss_pred HHHHHHcCCCHHHHHHHHHHHHhhCCchHhHHHHHHHHHHhcCccCCCC--CeEEEE-Eeccchhhhhhhee
Confidence 88899999999987532 112348898888876666666544221 123 555554 3677777654 443
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=2.8e-22 Score=234.22 Aligned_cols=278 Identities=18% Similarity=0.210 Sum_probs=189.5
Q ss_pred HHHHHHHHHHHHHHcCC-Cccc----cC----cEEEEeccCCCC-----------------------ccccHHHHHHH-H
Q 012506 76 DDLLAPVLKAVIEKTNV-DPSE----VG----DIVVGTVLAPGS-----------------------QRASECRMAAF-Y 122 (462)
Q Consensus 76 ~eL~~~A~~~Al~~agl-~~~~----Id----~vivG~~~~~~~-----------------------~~~~~a~~~a~-~ 122 (462)
..|+.+++.+||+++|+ +|.+ |+ ++++|+..+... .....+.+++. .
T Consensus 1212 ~~l~L~aa~eAL~dAGi~dp~e~~~~i~~s~vGv~vGs~~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~is~~~ 1291 (1887)
T 2uv8_A 1212 TLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNMLL 1291 (1887)
T ss_dssp HHHHHHHHHHHHHHTTCSSGGGHHHHSCGGGEEECCEESSCCHHHHHHHHTTTTTTCCCCTTHHHHHSTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCCChhhhhcccCCceeEEEeccCCccHHHHHHHHHHHHhcCCCCcchhhcchhhHHHHHHHHHH
Confidence 45889999999999999 4766 44 466665543200 01123456666 4
Q ss_pred cCCCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHH
Q 012506 123 AGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSEN 202 (462)
Q Consensus 123 ~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~ 202 (462)
+|+ ++|+++++++|+|++.||+.|++.|++|++|++||+|+|.|+...+ ..+..|+.++.
T Consensus 1292 lgl--~GP~~tv~tACASsl~Al~~A~~~I~sG~advaLvGGvd~~~~~~~-----------------~~f~~m~als~- 1351 (1887)
T 2uv8_A 1292 ISS--SGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQEEGS-----------------FEFGNMKATSN- 1351 (1887)
T ss_dssp TCC--CSCCCCCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHH-----------------HHHHHTTCBCC-
T ss_pred cCC--ccceEEeecccccHHHHHHHHHHHHHcCCCCEEEEeeeccCChHHH-----------------HHHHHhhhhcc-
Confidence 899 6799999999999999999999999999999999999999754110 00011111110
Q ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC
Q 012506 203 VAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK 282 (462)
Q Consensus 203 ~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p 282 (462)
..++++ .| .++++.+ || |+.
T Consensus 1352 ----------~~~e~~------------~g-------------------------~~p~~~~------------RP-fd~ 1371 (1887)
T 2uv8_A 1352 ----------TLEEFE------------HG-------------------------RTPAEMS------------RP-ATT 1371 (1887)
T ss_dssp ----------HHHHHH------------TT-------------------------CCGGGSC------------CT-TBT
T ss_pred ----------chhhhc------------cc-------------------------CCCccCc------------CC-Ccc
Confidence 000000 00 1123333 33 432
Q ss_pred --CCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCC------Cc-------------------
Q 012506 283 --DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIM------GV------------------- 335 (462)
Q Consensus 283 --~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~------~~------------------- 335 (462)
+|++ .+||++++||++.+.|+++|.+|+++|.|++.+....... |+
T Consensus 1372 ~r~Gfv-------~gEGag~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~~s~paPg~G~lt~ar~~~G~gt~ps~~ld 1444 (1887)
T 2uv8_A 1372 TRNGFM-------EAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHSSVKYASPNLN 1444 (1887)
T ss_dssp TCCSBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCSCSCTTCCCSGGGGGGCCCCSCCSSCCGGGC
T ss_pred cCCCcc-------cccceEEEEEccHHHHHHCCCceEEEEeeeEEecCCccccCCCCCccccccccccccccCCCCcccc
Confidence 3443 7999999999999999999999999999999876432111 00
Q ss_pred ------------------------------------------------------------------------cHHHHHHH
Q 012506 336 ------------------------------------------------------------------------GPAVAIPA 343 (462)
Q Consensus 336 ------------------------------------------------------------------------~~~~Ai~~ 343 (462)
+...++++
T Consensus 1445 ~~~r~~ql~~~~~~i~~~~~~~~~~l~~~~~~~g~~~~~~~~Qe~~~~i~~~~~~~~~~~~~~~~~~~~~~d~~~~air~ 1524 (1887)
T 2uv8_A 1445 MKYRKRQLVTREAQIKDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPRIAPLRG 1524 (1887)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTTTCSSSCHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHhhccchhhchHHHHHHHH
Confidence 00368999
Q ss_pred HHHHcCCCCCCccEEEecCCCHHH----HHHHH-H---HcCCCC-CCCCCCCCccccCCccchHHHHHHHHHHHHHHhcC
Q 012506 344 AVKSAGLQLDDIDLFEINEAFASQ----FVYCR-N---KLGLDP-EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG 414 (462)
Q Consensus 344 aL~~AGl~~~DID~~eihdafa~~----~~~~~-e---~LGl~~-~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~ 414 (462)
+|+++||+++||||+|.|++++.. +...+ + .+|-.. .++.+..-+..+|||.||+|+.+++.++.+|+...
T Consensus 1525 ALa~AGl~p~DId~veaHGTgT~~gD~~E~~Al~~~f~~~gr~~~~pl~v~s~KsliGH~~gAAGa~~li~~ll~L~~g~ 1604 (1887)
T 2uv8_A 1525 ALATYGLTIDDLGVASFHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQILNSGI 1604 (1887)
T ss_dssp HHHTTTCCGGGEEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCTTCCEEEECTHHHHCBCGGGHHHHHHHHHHHHHTTCE
T ss_pred HHHHcCCCHHHceEEEecCCCCcccCHHHHHHHHHHHhhhccCCCCcEEEEecccceechHHHHhHHHHHHHHHHHHhCC
Confidence 999999999999999999999953 22222 2 234432 23333222333799999999999999999998741
Q ss_pred -----------------------------CCCcEEEEEeecccceeEEEEEEecc
Q 012506 415 -----------------------------RDCRFGVISMCIGTGMGAAAVFERGD 440 (462)
Q Consensus 415 -----------------------------~~~~~gl~~~~~G~G~g~A~v~~~~~ 440 (462)
.+.++++++..+.||.++.+|++...
T Consensus 1605 iPpt~n~d~~dp~l~~~~~l~~~~~~~~~~~~r~a~v~SFGFGG~NahvIle~p~ 1659 (1887)
T 2uv8_A 1605 IPGNRNADNVDKILEQFEYVLYPSKTLKTDGVRAVSITSFGFGQKGGQAIVVHPD 1659 (1887)
T ss_dssp ECCCTTCSSBCGGGGGCTTEECCSSCEECSCCCEEEEEEEETTTEEEEEEEECTH
T ss_pred cCCcCCCCCCCCccccccccccccccccCCCCCEEEEccCCCCCccEEEEEecCC
Confidence 02477888887777888888888643
|
| >4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.2e-21 Score=196.16 Aligned_cols=245 Identities=18% Similarity=0.210 Sum_probs=179.7
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHH
Q 012506 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAA 150 (462)
Q Consensus 71 ~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~ 150 (462)
++++..+|+.+|+++||+++|+++++||.|++++.+++.. .+..+..++..+|++ +.++++++.+|+++++||..|.+
T Consensus 58 ~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~-~P~~a~~v~~~LGl~-~~~a~di~~~C~g~~~aL~~A~~ 135 (350)
T 4ewp_A 58 AEETVPVMAVGAAREALERAGLQGSDLDAVIVSTVTFPHA-TPSAAALVAHEIGAT-PAPAYDVSAACAGYCYGVAQADA 135 (350)
T ss_dssp SSCCHHHHHHHHHHHHHHHTTCCGGGCSEEEEECSCCSCS-SSCHHHHHHHHTTCT-TSCEEEEECGGGHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCC-CCchHHHHHHHhCCC-CceEEEeecchhhHHHHHHHhhh
Confidence 6789999999999999999999999999999999988765 678899999999996 67899999999999999999999
Q ss_pred HHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Q 012506 151 AIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 230 (462)
Q Consensus 151 ~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~ 230 (462)
+|++|.++.+||+++|.+|...
T Consensus 136 ~i~~g~~~~~Lvv~~E~~s~~~---------------------------------------------------------- 157 (350)
T 4ewp_A 136 LVRSGTARHVLVVGVERLSDVV---------------------------------------------------------- 157 (350)
T ss_dssp HHHTTSCSEEEEEEEEEGGGGC----------------------------------------------------------
T ss_pred hhhCCCccceeEeeeeeceecc----------------------------------------------------------
Confidence 9999999999999999987511
Q ss_pred cCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHH
Q 012506 231 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 310 (462)
Q Consensus 231 ~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~ 310 (462)
||.. ...+...+|||+|+||...+.
T Consensus 158 ----------------d~~~-------------------------------------~~~~~lfgDGA~A~vl~~~~~-- 182 (350)
T 4ewp_A 158 ----------------DPTD-------------------------------------RSISFLLGDGAGAVIVAASDE-- 182 (350)
T ss_dssp ----------------CTTC-------------------------------------TTTGGGBCEEEEEEEEEEESS--
T ss_pred ----------------cccc-------------------------------------cccccccccchheeeeecccC--
Confidence 1100 000112589999999976432
Q ss_pred hcCCCceEEEEEEEEec-----------------------cCCC------------C-CC---------ccHHHHHHHHH
Q 012506 311 RKGLPILGVFRTFAAVG-----------------------VDPA------------I-MG---------VGPAVAIPAAV 345 (462)
Q Consensus 311 ~~g~~~~~~i~g~~~~~-----------------------~~p~------------~-~~---------~~~~~Ai~~aL 345 (462)
.+. .....+.-... .+.. . |. .....+++++|
T Consensus 183 -~~~--~~~~~~sdg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~a~~~~~~~i~~~L 259 (350)
T 4ewp_A 183 -PGI--SPSVWGSDGERWSTISMTHSQLELRDAVEHARTTGDASAITGAEGMLWPTLRQDGPSVFRWAVWSMAKVAREAL 259 (350)
T ss_dssp -CCB--CCCEEEECGGGTTSEEESSCHHHHHHHHHHHHHHSCCTTTTTCSSCSSCCEEECHHHHHHHHHHTHHHHHHHHH
T ss_pred -CCc--cceeeeecccccceeeecCCccccCcccccccccCCccccccccccccceeEehhHHHHHHHHHhhhHHHHHHH
Confidence 111 11111110000 0000 0 00 01235788999
Q ss_pred HHcCCCCCCccEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEee
Q 012506 346 KSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMC 425 (462)
Q Consensus 346 ~~AGl~~~DID~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~ 425 (462)
+++|++++|||+|-+|+++..+...+.+.||++++++-+. -.--+||...+|-...+.+++.+-+-+.| ++.+...
T Consensus 260 ~~~gl~~~did~~v~Hq~~~~i~~~~~~~Lgl~~~~~~~~-~l~~~GNtssasi~~~L~~~~~~g~~~~G--d~vll~~- 335 (350)
T 4ewp_A 260 DAAGVEPEDLAAFIPHQANMRIIDEFAKQLKLPESVVVAR-DIADAGNTSAASIPLAMHRLLEENPELSG--GLALQIG- 335 (350)
T ss_dssp HHHTCCGGGEEEEEECCSCHHHHHHHHHHTTCCTTSEECC-THHHHCBCGGGHHHHHHHHHHHHCGGGTT--SEEEEEE-
T ss_pred HhhcCChhHhceEEecCCCHHHHHHHHHHcCcChHhEEec-ccccccchHHHHHHHHHHHHHHhCCCCCc--CEEEEEE-
Confidence 9999999999999999999999999999999998875431 12348999999977777777765444444 5655543
Q ss_pred cccceeEEEEEE
Q 012506 426 IGTGMGAAAVFE 437 (462)
Q Consensus 426 ~G~G~g~A~v~~ 437 (462)
.|.|+.++.++.
T Consensus 336 fG~G~t~~~~vl 347 (350)
T 4ewp_A 336 FGAGLVYGAQVV 347 (350)
T ss_dssp EETTTEEEEEEE
T ss_pred EchhhEeEEEEE
Confidence 577777655443
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.6e-21 Score=227.53 Aligned_cols=276 Identities=17% Similarity=0.207 Sum_probs=190.9
Q ss_pred HHHHHHHHHHHHHHcCCC-ccc----cC----cEEEEeccCCCC--------------------c---cccHHHHHHH-H
Q 012506 76 DDLLAPVLKAVIEKTNVD-PSE----VG----DIVVGTVLAPGS--------------------Q---RASECRMAAF-Y 122 (462)
Q Consensus 76 ~eL~~~A~~~Al~~agl~-~~~----Id----~vivG~~~~~~~--------------------~---~~~~a~~~a~-~ 122 (462)
..|+.+++.+||+++|++ |.+ |+ ++++|+..+... + ....+.+++. .
T Consensus 1187 ~~l~L~aa~eAL~~AGi~~p~e~~~~i~~s~vGv~vGsg~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~vs~~~ 1266 (1878)
T 2uv9_A 1187 TLYVLVSVAEALLSSGITDPYEFYKYVHLSEVGNCIGSGVGGTSALRGMYKDRYLDKPVQKDILQESFVNTMAAWVNMLL 1266 (1878)
T ss_dssp HHHHHHHHHHHHHTTTCSSGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHTTTTTTCCCCSCTTGGGSHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCCChhhhhcccCccceEEEEccCCccHHHHHHHHHHHHhcCCCCchhhhcchHHHHHHHHHHHh
Confidence 457889999999999998 766 44 577776654310 0 0123456666 4
Q ss_pred cCCCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHH
Q 012506 123 AGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSEN 202 (462)
Q Consensus 123 ~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~ 202 (462)
+|+ ++|+++++++|+|++.||+.|++.|++|++|++||+|+|.|+...+ ..+..|+.
T Consensus 1267 lg~--~GP~~tv~tACASsl~Al~~A~~~I~sG~advalvGGvd~~~~~~~-----------------~~f~~m~a---- 1323 (1878)
T 2uv9_A 1267 LSS--TGPIKTPVGACATAVESLDVGYDTIMQGKARVCLVGGFDDFQEEGS-----------------YEFANMGA---- 1323 (1878)
T ss_dssp CCC--CCCBCCBCCGGGHHHHHHHHHHHHHTTTSCSEEEEEEEECCCHHHH-----------------HHHHHHTC----
T ss_pred cCC--CCCeEEEcCcchHHHHHHHHHHHHHHcCCCCEEEEeeeccCChHHH-----------------HHHHHhhh----
Confidence 898 6799999999999999999999999999999999999999754110 00011111
Q ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC
Q 012506 203 VAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK 282 (462)
Q Consensus 203 ~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p 282 (462)
.+. ..++++ .| .++++.+| | |+.
T Consensus 1324 ------ls~-~~de~a------------~g-------------------------~~p~~~~R------------P-fd~ 1346 (1878)
T 2uv9_A 1324 ------TSN-AKEEFA------------RG-------------------------REPGEMSR------------P-TST 1346 (1878)
T ss_dssp ------BCC-HHHHHT------------TT-------------------------CCTTSSCC------------S-SBT
T ss_pred ------hcc-chhhhh------------cC-------------------------CCcccCcC------------C-Ccc
Confidence 110 011111 00 11233333 3 432
Q ss_pred --CCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCCC----CccH-------------------
Q 012506 283 --DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAIM----GVGP------------------- 337 (462)
Q Consensus 283 --~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~~----~~~~------------------- 337 (462)
+|+ ..+||++++||++.+.|+++|.+|+++|.+++.+....... +.+.
T Consensus 1347 ~r~Gf-------v~gEGag~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~~s~paPg~G~~t~ar~~~~~~ps~~~~~~ 1419 (1878)
T 2uv9_A 1347 TRNGF-------MESQGCGVQVIMTAQLALEMGVPIYGIVAMTSTATDKIGRSVPAPGQGVLTTAREKSGNFPSPLLDIK 1419 (1878)
T ss_dssp TCCCB-------CBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCSCSCSSCCCSCGGGGGCCCCCSSCCGGGSHH
T ss_pred CCCCC-------cccceeEEEEEeeHHHHHHCCCceEEEEEEEEEecCCCccCCCCCCcchhhhhhhccccCCCcccchH
Confidence 344 37999999999999999999999999999999875322110 1111
Q ss_pred --------------------------------------------------------------------------------
Q 012506 338 -------------------------------------------------------------------------------- 337 (462)
Q Consensus 338 -------------------------------------------------------------------------------- 337 (462)
T Consensus 1420 ~r~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~Q~~~~~i~~~~~~q~~~a~~~~g~~~~~~~~~ 1499 (1878)
T 2uv9_A 1420 YRRRQLELRRQQIKQWKESEYLYLQEEVAAIKSQRSEEDGPFDETAYLRERTEHIEREARRQEAEAQTSFGNEFWRRDSR 1499 (1878)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTTCTT
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhHHHHhhhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhcccccccChH
Confidence
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCCHHH----HHHHH----HHcCCCCC---CCCCCCCccccCCccchHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAFASQ----FVYCR----NKLGLDPE---KINVNGGALAIGHPLGTTGARCVATL 406 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdafa~~----~~~~~----e~LGl~~~---~vn~~GG~~a~Ghp~gatG~~~~~~~ 406 (462)
..+++++|+++||+++|||++|.|++++.. +...+ ..+|-... +++..++. +|||.||+|+.+++.+
T Consensus 1500 ~~~ir~ALa~aGl~~~DId~veaHGTgT~~gD~~E~~al~~~f~~~~r~~~~pl~v~s~Ksl--iGH~~gAAGa~~li~~ 1577 (1878)
T 2uv9_A 1500 IAPLRGALATWGLTIDDLGVASFHGTSTVANDKNESDVICQQLKHLGRTKGNAVLGIFQKYL--TGHPKGAAGAWMLNGC 1577 (1878)
T ss_dssp SCHHHHHHHTTTCCGGGEEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCTTCCEEEECTHHH--HCBCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHeeEEEEcCCCCcccCHHHHHHHHHHHhhcCCCCCCceeEEecccc--cCChHhHhhHHHHHHH
Confidence 168999999999999999999999999953 22222 22343321 34444444 7999999999999999
Q ss_pred HHHHHhcC-----------------------------CCCcEEEEEeecccceeEEEEEEecc
Q 012506 407 LHEMKRRG-----------------------------RDCRFGVISMCIGTGMGAAAVFERGD 440 (462)
Q Consensus 407 ~~qL~~~~-----------------------------~~~~~gl~~~~~G~G~g~A~v~~~~~ 440 (462)
+.+|+... .+.++++++..+.||.++.+|++...
T Consensus 1578 l~~L~~g~iPp~~n~d~~dp~i~~~~~v~~~~~~~~~~~~r~a~v~SFGFGG~NahvIle~p~ 1640 (1878)
T 2uv9_A 1578 LQVLNTGIVPGNRNADNVDKVMEQFDYIVYPSRSIKTDGIKAFSVTSFGFGQKGAQAIGVHPK 1640 (1878)
T ss_dssp HHHHTTCEECCCTTCCSBCGGGGGCTTEECCSSCEECSCCCEEEEEEEETTTEEEEEEEECTH
T ss_pred HHHHhcCCCCCCCCCCCCCCccccccccccccccccCCCCCEEEEccCCCCCeeEEEEEecCC
Confidence 99999741 02477888887778888888888653
|
| >3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.6e-21 Score=198.04 Aligned_cols=256 Identities=18% Similarity=0.129 Sum_probs=176.4
Q ss_pred eecccccCCCCCCCCC--CHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEec
Q 012506 58 YRTALCKSKRGGFKDT--YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVN 135 (462)
Q Consensus 58 ~rTp~~~~~~g~~~d~--~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~ 135 (462)
.+|.+.+. +-...+. ++.+|+.+|+++||+++|+++++||.|++++......+...++..++..+|++ ++++++|+
T Consensus 36 ~~tGi~~r-~~a~~~e~~~~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~~~~~~d~~~~a~~v~~~lG~~-~~~~~~v~ 113 (357)
T 3s3l_A 36 KLRGIESV-TVASDAEEDAPPRMAARAARAALGRGDVDPADVSLVLHSSLWFQGIDLWPAASYVAHEAVGR-HVPAFGLA 113 (357)
T ss_dssp HHHCCCEE-ECCCSSGGGSHHHHHHHHHHHHHHHTTCCGGGEEEEEEECSSCCSSSSSCHHHHHHHHHTCS-SSCEEEEE
T ss_pred HHcCceEE-EecCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCcccccHHHHHHHHhCCC-CCcEEEEc
Confidence 45555442 2222344 89999999999999999999999999999998421211336788999999995 79999999
Q ss_pred CCCchHHHHHHHHHHHHHccCCC--EEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHH
Q 012506 136 RQCSSGLQAVADVAAAIKAGFYD--IGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKE 213 (462)
Q Consensus 136 ~~CsSgl~Ai~~Aa~~I~sG~~d--~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~ 213 (462)
.+|+|+++||..|+.+|++|.++ +|||+|+|+||.....
T Consensus 114 ~aC~~~~~al~~A~~~i~sg~~~~~~vLvvg~e~~s~~~~~--------------------------------------- 154 (357)
T 3s3l_A 114 QRCNGGMGAIELAGAYLGSGIGAGHAALLTTGDRFAGPRID--------------------------------------- 154 (357)
T ss_dssp CGGGHHHHHHHHHHHHHHTTSSSSSEEEEEEEECCCTTTCC---------------------------------------
T ss_pred CccHHHHHHHHHHHHHHHcCCCCCCEEEEEEEecccccccc---------------------------------------
Confidence 99999999999999999999999 9999999999841000
Q ss_pred HHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCC
Q 012506 214 QDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQ 293 (462)
Q Consensus 214 ~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~ 293 (462)
++ ++ ..+..
T Consensus 155 ---------------------------------~~------------~~--------------------------~~~~l 163 (357)
T 3s3l_A 155 ---------------------------------RW------------NS--------------------------VDVTM 163 (357)
T ss_dssp ---------------------------------TT------------TS--------------------------SSSCC
T ss_pred ---------------------------------cc------------cc--------------------------cCCcc
Confidence 00 00 01223
Q ss_pred cCCcceEEEEeCHHHHHhcCCCceEEEEEEEEe--cc------------CCC-----CCC-------------------c
Q 012506 294 VSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAV--GV------------DPA-----IMG-------------------V 335 (462)
Q Consensus 294 ~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~--~~------------~p~-----~~~-------------------~ 335 (462)
.+|||+|+||.+.+. . ..+.++... +. +|. .+. .
T Consensus 164 fGDGA~A~vl~~~~~-------~-~~i~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~ 235 (357)
T 3s3l_A 164 YGDGAAALVLSTRDG-------F-ARVLSTATGVDNSLEILARGDEPFAPHPVEPSPVADLGTRTVRGAELADLPDLTHR 235 (357)
T ss_dssp BCCEEEEEEEESSCC-------S-EEEEEEEEEECGGGGGGGTTTCCCCSSCCSSCCCCCHHHHHHHHHHHHCCTTHHHH
T ss_pred cccccEEEEEecCCC-------C-CeEEEEEEEEccChhhhcccCCCCCCCccCcCCccccccchhhhhcccchhhhHHH
Confidence 699999999987531 1 123332221 10 010 000 0
Q ss_pred ---cHHHHHHHHHHHcCCCCCCccEEEe-cCCCHHHHHHHHHHcCCCCCCCCCCCCcc-ccCCccchHHHHHHHHHHHHH
Q 012506 336 ---GPAVAIPAAVKSAGLQLDDIDLFEI-NEAFASQFVYCRNKLGLDPEKINVNGGAL-AIGHPLGTTGARCVATLLHEM 410 (462)
Q Consensus 336 ---~~~~Ai~~aL~~AGl~~~DID~~ei-hdafa~~~~~~~e~LGl~~~~vn~~GG~~-a~Ghp~gatG~~~~~~~~~qL 410 (462)
....+++++|+++|++++|||+|-+ |+++.. ...+.++||++++++..+ .. -+||...++-...+.+++.+-
T Consensus 236 ~~~~~~~~i~~~L~~~gl~~~did~~v~~hq~~~~-~~~~~~~lgl~~ek~~~~--~~~~~GNt~aAsipl~L~~~~~~g 312 (357)
T 3s3l_A 236 YIDLLVAAKTQALEDAGTAIEDIAHAVIPVSRRGT-GHELHDLLGLPDERTSWA--YGRTTGHVGAGDQYAGLAHLVENA 312 (357)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCSEEECCSCCCCS-SCCHHHHHTSCGGGBTHH--HHHHHCBCTTCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEecCcChHH-HHHHHHHcCCCHHHhHHH--hccccccchHhHHHHHHHHHHHcC
Confidence 1234778999999999999999996 999988 777889999999987642 11 268888887666666655432
Q ss_pred HhcCCCCcEEEEEeecccceeE-EEEEEec
Q 012506 411 KRRGRDCRFGVISMCIGTGMGA-AAVFERG 439 (462)
Q Consensus 411 ~~~~~~~~~gl~~~~~G~G~g~-A~v~~~~ 439 (462)
+-+.| ++.|... .|.|+.+ +++|+-.
T Consensus 313 ~l~~G--d~vll~~-fG~G~t~~a~ll~~~ 339 (357)
T 3s3l_A 313 LVQPG--DRVLLFG-GGAGYTCTAAVVEIL 339 (357)
T ss_dssp CCCTT--CEEEEEC-CBTTTEEEEEEEEEC
T ss_pred CCCCC--CEEEEEE-EchhhhheeeeEEec
Confidence 22223 5555554 5667666 4455543
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.87 E-value=6e-23 Score=232.89 Aligned_cols=277 Identities=18% Similarity=0.196 Sum_probs=187.6
Q ss_pred HHHHHHHHHHHHHHHcCCC-ccc----cC----cEEEEeccCCCCc-----------------------cccHHHHHHH-
Q 012506 75 PDDLLAPVLKAVIEKTNVD-PSE----VG----DIVVGTVLAPGSQ-----------------------RASECRMAAF- 121 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~-~~~----Id----~vivG~~~~~~~~-----------------------~~~~a~~~a~- 121 (462)
...|+.+++.+||+++|++ |.+ |+ ++++|+..+.... ....+.+++.
T Consensus 1012 ~qrLaLeAa~EALedAGI~dP~ei~~~i~~s~vGV~vGSg~Gg~~~l~~~~~~~~~~~~v~~~~l~~~~~nt~Aa~Vs~~ 1091 (1688)
T 2pff_A 1012 ITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNML 1091 (1688)
T ss_dssp STTHHHHHHHHHHTTTTCSSGGGGGGGTCCSCSCCCCCCCSCCCSSHHHHHHSSSSCCCCCSTTHHHHCTHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHcCCCChHHhccccCCceEEEEecccCCCHHHHHHHHHHHHhcCCCCcchhccccHHHHHHHHHHH
Confidence 3568999999999999997 665 33 5566654443110 0113445666
Q ss_pred HcCCCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHH
Q 012506 122 YAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSE 201 (462)
Q Consensus 122 ~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~ 201 (462)
.+|+ ++|+++++++|+|++.||+.|++.|++|++|++||+|+|.|+...+.. +..|+.++.
T Consensus 1092 ~LGl--~GPs~TVdtACASSL~AL~lA~~aIrsGeaDvaLVGGvE~msp~~~~~-----------------Fa~mgaLS~ 1152 (1688)
T 2pff_A 1092 LISS--SGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQEEGSFE-----------------FGNMKATSN 1152 (1688)
T ss_dssp SCCC--CCCCCCCCCTTTTTHHHHHHHHHHHHTTTCSCBCCCCCCCCCTTTTTT-----------------TTTTSCSCC
T ss_pred HcCC--cCCeEEecCCCchHHHHHHHHHHHHHCCCCCEEEEeeeccCCHHHHHH-----------------HHhcccccc
Confidence 6888 579999999999999999999999999999999999999987643210 000110000
Q ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCccc
Q 012506 202 NVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFK 281 (462)
Q Consensus 202 ~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~ 281 (462)
+.+ .|. . -.++++.+ || |+
T Consensus 1153 --------~~~--------------------e~a---------------~-----G~~Pd~~c------------RP-Fd 1171 (1688)
T 2pff_A 1153 --------TLE--------------------EFE---------------H-----GRTPAEMS------------RP-AT 1171 (1688)
T ss_dssp --------TTT--------------------TTT---------------S-----SCCSSSSC------------CS-SS
T ss_pred --------Chh--------------------hhh---------------c-----CCChhhcc------------Cc-Cc
Confidence 000 000 0 01123333 33 43
Q ss_pred C--CCCcccCCCCCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCC-----C-CCc------------------
Q 012506 282 K--DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPA-----I-MGV------------------ 335 (462)
Q Consensus 282 p--~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~-----~-~~~------------------ 335 (462)
. +|+ ..+||++++||++.+.|+++|.+|+++|.|++.+..... . .+.
T Consensus 1172 ~~rdGf-------v~GEGAGavVLesle~Al~~G~~IyAvI~GsavnsDg~~~SipAPg~GiLt~Ar~~~G~~taPSp~l 1244 (1688)
T 2pff_A 1172 TTRNGF-------MEAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHSSVKYASPNL 1244 (1688)
T ss_dssp SSCCCC-------CCCSCCEEEEEECSHHHHSSSCCCCCEECCCCCCCCCCCSSSCCCCSSSSSSSSSCCCCSSCSSCCS
T ss_pred cCCCCC-------ccccceEEEEeCcHHHHHHCCCceEEEEEEEEEECCCCccCCCCCCCCccchhhhcccccCCCCccc
Confidence 2 343 379999999999999999999999999999887653211 0 111
Q ss_pred -------------------------------------------------------------------------cHHHHHH
Q 012506 336 -------------------------------------------------------------------------GPAVAIP 342 (462)
Q Consensus 336 -------------------------------------------------------------------------~~~~Ai~ 342 (462)
+...+++
T Consensus 1245 d~~~R~rql~~~~~~i~~~~~~e~~~l~~e~~~~g~~~~~~~aQer~~~i~~~~~r~~~~~~~~~Gn~f~~~d~~~~aIr 1324 (1688)
T 2pff_A 1245 NMKYRKRQLVTREAQIKDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPRIAPLR 1324 (1688)
T ss_dssp CTTCCHHHHSHHHHHHHHHHHHHHHHHHHHSSSSCSSHHHHHHHHHHHHTHHHHHHHHHHHHHTTTTSSSSSCTTCCSHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHHHHHhccCCceecchHHHHHHH
Confidence 0035789
Q ss_pred HHHHHcCCCCCCccEEEecCCCHHH----HHHH-HHHc---CCCC---CCCCCCCCccccCCccchHHHHHHHHHHHHHH
Q 012506 343 AAVKSAGLQLDDIDLFEINEAFASQ----FVYC-RNKL---GLDP---EKINVNGGALAIGHPLGTTGARCVATLLHEMK 411 (462)
Q Consensus 343 ~aL~~AGl~~~DID~~eihdafa~~----~~~~-~e~L---Gl~~---~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~ 411 (462)
++|+++||+++|||++|.|++++.. +... .+.+ |-.. -+++..++. +|||.||+|+.+++.++.+|+
T Consensus 1325 ~ALa~AGLtpdDIdyVEaHGTGT~lgD~iE~~AL~~af~~~gr~~g~pl~V~S~Ksl--iGHp~GAAGa~~Lik~llaL~ 1402 (1688)
T 2pff_A 1325 GALATYGLTIDDLGVASFHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFL--TGHPKGAAGAWMMNGALQILN 1402 (1688)
T ss_dssp HHTTSSCSSTTCCCCCCCCCCSCSSSSTTTTTTTGGGTGGGCCCTTCCCCCCCCTTT--TCCCSSTHHHHHHHHHHHHST
T ss_pred HHHHHcCCCHHHeeEEEEeCCCCccccHHHHHHHHHHHhhhCcCCCCeEEEEeChhh--hcchHHHhhHHHHHHHHHHHH
Confidence 9999999999999999999988832 2111 1223 3322 234455555 799999999999999999999
Q ss_pred hcCC-----------------------------CCcEEEEEeecccceeEEEEEEecc
Q 012506 412 RRGR-----------------------------DCRFGVISMCIGTGMGAAAVFERGD 440 (462)
Q Consensus 412 ~~~~-----------------------------~~~~gl~~~~~G~G~g~A~v~~~~~ 440 (462)
...- +.+++++++.+.||.++.+|++..+
T Consensus 1403 ~G~IPptln~d~pdp~l~~~d~v~~p~~~~~~~~~r~AlVnSFGFGGtNAhvILe~p~ 1460 (1688)
T 2pff_A 1403 SGIIPGNRNADNVDKILEQFEYVLYPSKTLKTDGVRAVSITSFGFGQKGGQAIVVHPD 1460 (1688)
T ss_dssp TCCCCCCSCCSCCCTTCCSSCCCCSCTTCCSSSSSSCCCCCCCCSTTCCCCCCEECSS
T ss_pred cCCCCCCCCCCCCCCCCCcCCceeecCccccCCCCcEEEEeeECCCCeeEEEEEeCCC
Confidence 7520 1356777776667788888887654
|
| >3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.1e-20 Score=194.12 Aligned_cols=238 Identities=12% Similarity=0.055 Sum_probs=170.9
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHH
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIK 153 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~ 153 (462)
+..+|+.+|+++||+++|+++++||.|++++..++.. .+..+..++..+|+ ++++++++.+|+|+++||..|+++|+
T Consensus 116 ~~~~La~~Aa~~AL~~agi~~~dId~vi~~t~t~~~~-~p~~a~~v~~~LGl--~~~~~dv~~aC~g~~~aL~~A~~~i~ 192 (392)
T 3led_A 116 ILAEMAVTAAEQAIERWGKPRERIGAVLCACSNMQRA-YPAMAIEVQNALGL--GGFAFDMNVACSSATFGLKTAADFVG 192 (392)
T ss_dssp HHHHHHHHHHHHHHHHHCSCGGGEEEEEEESSCCSCS-BSCHHHHHHHHTTC--CSEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCC-ccHHHHHHHHHhCC--CCeEEEECCccHHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999887665 67789999999999 47999999999999999999999999
Q ss_pred ccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCC
Q 012506 154 AGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGK 233 (462)
Q Consensus 154 sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~ 233 (462)
+|.+++|||+|+|.||...
T Consensus 193 ~g~~~~vLvvg~E~~S~~~------------------------------------------------------------- 211 (392)
T 3led_A 193 GGSVDAVLMVNPEICSGHL------------------------------------------------------------- 211 (392)
T ss_dssp TTSCSEEEEEEEEEGGGGC-------------------------------------------------------------
T ss_pred CCCCCEEEEEeehhcCCcC-------------------------------------------------------------
Confidence 9999999999999997621
Q ss_pred CccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcC
Q 012506 234 FKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKG 313 (462)
Q Consensus 234 f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g 313 (462)
|+. | + ..+...+|||+|+||.+.+...
T Consensus 212 -------------d~~-----------d--------------------r------~t~~lFGDGA~A~vl~~~~~~~--- 238 (392)
T 3led_A 212 -------------NFR-----------D--------------------R------DSHFIFGDVATAAIVERADDAQ--- 238 (392)
T ss_dssp -------------CTT-----------C--------------------T------TTTTTBCEEEEEEEEEEGGGCC---
T ss_pred -------------CcC-----------c--------------------c------cCCcccccccEEEEEEecCCCC---
Confidence 000 0 0 0122369999999998765210
Q ss_pred CCceEEEEEEEEecc---------------CCCCCC--------cc----------HHHHHHHHHHHcCCCCCCccEEEe
Q 012506 314 LPILGVFRTFAAVGV---------------DPAIMG--------VG----------PAVAIPAAVKSAGLQLDDIDLFEI 360 (462)
Q Consensus 314 ~~~~~~i~g~~~~~~---------------~p~~~~--------~~----------~~~Ai~~aL~~AGl~~~DID~~ei 360 (462)
+...+.+...... .++.+. .+ ...+++++|+++|++++|||+|-+
T Consensus 239 --~~~~i~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~v~~~a~~~~~~~i~~~L~~~gl~~~dId~~v~ 316 (392)
T 3led_A 239 --GGWSILGTKLKTQFSNNIRNNAGFLNRAWPEGRDKADKLFVQQGRKVFKEVVPLVSEMIIEHAREIGIDPHGLKRMWL 316 (392)
T ss_dssp --SSEEEEEEEEEECCCSSEEBCCSGGGGGSGGGTTSGGGSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCSEEEE
T ss_pred --CCCeEEEEEEEEccccccccCCCcccCCCccccccccceEEechHHHHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEE
Confidence 1113333222110 011000 01 124678999999999999999999
Q ss_pred cCCCHHHHHHHHHHc-CC--CCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEE-EEE
Q 012506 361 NEAFASQFVYCRNKL-GL--DPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAA-AVF 436 (462)
Q Consensus 361 hdafa~~~~~~~e~L-Gl--~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A-~v~ 436 (462)
|+++..+.....++| |+ +.+++..+ .--+||...||-...+.++ .++.+..++.|... .|.|+.++ ++|
T Consensus 317 Hqan~~i~~~~~~~llgl~~~~~k~~~~--l~~~GNtssAsipl~L~~~----~~~~~~Gd~vll~g-fG~G~t~~~~ll 389 (392)
T 3led_A 317 HQANINMNEIIGRKVLGRDPTRDENVII--LDDYANTSSAGSIIAFHKH----QDDMAQGDLGLICS-FGAGYSAGTVFV 389 (392)
T ss_dssp CSSCHHHHHHHHHHHHTSCCCTTTBCCC--HHHHCBCGGGHHHHHHHHC----CTTCCTTCEEEEEE-EETTTEEEEEEE
T ss_pred cCCCHHHHHHHHHHhcCCCCCHHHHHHH--HhhhCccHHHHHHHHHHHH----hCCCCCCCEEEEEE-EChhhEeEEEEE
Confidence 999999888888886 75 45565443 3458999888865555443 33322125666654 56676664 454
Q ss_pred E
Q 012506 437 E 437 (462)
Q Consensus 437 ~ 437 (462)
+
T Consensus 390 ~ 390 (392)
T 3led_A 390 Q 390 (392)
T ss_dssp E
T ss_pred E
Confidence 4
|
| >3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.2e-20 Score=214.73 Aligned_cols=256 Identities=13% Similarity=0.059 Sum_probs=186.2
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCC-cceEEecCCCchHHHHHHHHHHHHH
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET-VPVRTVNRQCSSGLQAVADVAAAIK 153 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~-~p~~~v~~~CsSgl~Ai~~Aa~~I~ 153 (462)
..+|+.+|+++||+++|+++++||.|++++..+ .. .+..+..++..+|++.. .++++++.+|+|+++||..|+++|+
T Consensus 689 ~~~la~~Aa~~AL~~agl~~~dId~ii~~t~~~-~~-~p~~a~~v~~~lGl~~~~~~~~~v~~aCsg~~~Al~~A~~~i~ 766 (979)
T 3tsy_A 689 VPKLGKEAALKALKEWGQPKSKITHLVFCTTSG-VE-MPGADYKLANLLGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAE 766 (979)
T ss_dssp HHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSC-CC-SSCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHCCEEEEEeeCC-CC-CCcHHHHHHHHcCCCcccEEEeeeccccHhHHHHHHHHHHHHH
Confidence 456999999999999999999999999999544 33 57789999999999532 4689999999999999999999999
Q ss_pred ccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCC
Q 012506 154 AGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGK 233 (462)
Q Consensus 154 sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~ 233 (462)
+|.++++||+|+|.++......
T Consensus 767 sG~~~~vLvvg~e~~~~~~~~~---------------------------------------------------------- 788 (979)
T 3tsy_A 767 NNAGARVLVVCSEITVVTFRGP---------------------------------------------------------- 788 (979)
T ss_dssp TSTTCEEEEEEEECTTTTCCCC----------------------------------------------------------
T ss_pred hCCCCEEEEEEEEecchheeCC----------------------------------------------------------
Confidence 9999999999999975421100
Q ss_pred CccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcC
Q 012506 234 FKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKG 313 (462)
Q Consensus 234 f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g 313 (462)
...+++++ .+++..+|||+|+||.+.+.+..++
T Consensus 789 --------------------------------~~~~~~~~---------------~~~~lfGDGA~A~vL~~~~~~~~~~ 821 (979)
T 3tsy_A 789 --------------------------------SEDALDSL---------------VGQALFGDGSAAVIVGSDPDISIER 821 (979)
T ss_dssp --------------------------------CSSCHHHH---------------HHHHHBCCEEEEEEEESSCCSSSCC
T ss_pred --------------------------------CccCHHHH---------------hhhhhccCceEEEEEecCCCccccC
Confidence 00011111 1223369999999999877655455
Q ss_pred CCceEEEEEEEEeccCCCCC-----Ccc----------------HHHHHHHHHHHcCCCCCCccEEEecCCCHHHHHHHH
Q 012506 314 LPILGVFRTFAAVGVDPAIM-----GVG----------------PAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCR 372 (462)
Q Consensus 314 ~~~~~~i~g~~~~~~~p~~~-----~~~----------------~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~~~ 372 (462)
........++.........+ ..+ ...+++++|+++|++++|||+|.+|+++..+...+.
T Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~al~~agl~~~did~~~~Hq~~~~i~~~~~ 901 (979)
T 3tsy_A 822 PLFQLVSAAQTFIPNSAGAIAGNLREVGLTFHLWPNVPTLISENVEKCLTQAFDPLGISDWNSLFWIAHPGGPAILDAVE 901 (979)
T ss_dssp CCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCCGGGSEEEECCSCHHHHHHHH
T ss_pred cceEEEeeeeEEecCchhheEEEEecCceEEEEchHHHHHHHHHHHHHHHHHHhhcCCCCcccceEEECCCChHHHHHHH
Confidence 44444444444322111100 011 357899999999999999999999999999999999
Q ss_pred HHcCCCCCCCCCCCC-ccccCCccchHHHHHHHHHHHHHHhcCC-----CCcEEEEEeecccceeEEEEEEe
Q 012506 373 NKLGLDPEKINVNGG-ALAIGHPLGTTGARCVATLLHEMKRRGR-----DCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 373 e~LGl~~~~vn~~GG-~~a~Ghp~gatG~~~~~~~~~qL~~~~~-----~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
+.||++++++.++=- .--+||+..||-...+.+++.+++.... +...++... .|+|+.++.++.+
T Consensus 902 ~~lgl~~~k~~~~~~~l~~~GNtssasi~~~L~~~~~~~~~G~~v~~g~~~~~~ll~~-~G~G~t~~~~~l~ 972 (979)
T 3tsy_A 902 AKLNLDKKKLEATRHVLSEYGNMSSACVLFILDEMRKKSLKGERATTGEGLDWGVLFG-FGPGLTIETVVLH 972 (979)
T ss_dssp HHHTCCTTTTHHHHHHHHHHCBCTTHHHHHHHHHHHHHHHHTTCSBTTTTCSEEEEEE-ECGGGEEEEEEEE
T ss_pred HHcCCChHHHHHHHHHHHHcCCcchhhHHHHHHHHHhhhcccccccCCCCcceeEEEE-eCCchHHHHHHHH
Confidence 999999998765311 1238999999998888888877654321 113456654 6777777554433
|
| >3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=6.2e-20 Score=183.65 Aligned_cols=240 Identities=19% Similarity=0.163 Sum_probs=167.6
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHc
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKA 154 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~s 154 (462)
+.+|+.+|+++||+++|+++++||.+++++..++.. .+..+..++..+|++ ++++++++.+|+|+++||..|+.+|++
T Consensus 52 ~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~-~p~~a~~v~~~lGl~-~~~~~~v~~aC~s~~~al~~A~~~i~~ 129 (321)
T 3il6_A 52 TSDLCHQVAKQLLEKSGKQASEIDFILVATVTPDFN-MPSVACQVQGAIGAT-EAFAFDISAACSGFVYALSMAEKLVLS 129 (321)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCS-SSCHHHHHHHHTTCT-TCEEEEECCGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCcC-CCcHHHHHHHHcCCC-CceEEEeCcccHHHHHHHHHHHHHHHC
Confidence 899999999999999999999999999999887665 678899999999997 499999999999999999999999999
Q ss_pred cCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCC
Q 012506 155 GFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKF 234 (462)
Q Consensus 155 G~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f 234 (462)
|.++++|++|+|.+|...
T Consensus 130 g~~~~vLvvg~e~~s~~~-------------------------------------------------------------- 147 (321)
T 3il6_A 130 GRYQTGLVIGGETFSKML-------------------------------------------------------------- 147 (321)
T ss_dssp SSCCCEEEEEEECGGGGS--------------------------------------------------------------
T ss_pred CCCCEEEEEEEccccccC--------------------------------------------------------------
Confidence 999999999999997610
Q ss_pred ccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCC
Q 012506 235 KDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGL 314 (462)
Q Consensus 235 ~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~ 314 (462)
|+. | | ..+...+|||+|+||.+.+. .
T Consensus 148 ------------~~~-----------d---r-----------------------~~~~lfGDGA~A~vl~~~~~-----~ 173 (321)
T 3il6_A 148 ------------DWT-----------D---R-----------------------STAVLFGDGAAGVLIEAAET-----P 173 (321)
T ss_dssp ------------CTT-----------C---T-----------------------TTGGGBCCEEEEEEEEEESS-----C
T ss_pred ------------Ccc-----------c---c-----------------------ccceeeccccEEEEEEEcCC-----C
Confidence 000 0 0 01122699999999987542 1
Q ss_pred CceEEEEEE-EEe------c----cCCC---------CCCc-c---H---HHHHHHHHHHcCCCCCCccEEEecCCCHHH
Q 012506 315 PILGVFRTF-AAV------G----VDPA---------IMGV-G---P---AVAIPAAVKSAGLQLDDIDLFEINEAFASQ 367 (462)
Q Consensus 315 ~~~~~i~g~-~~~------~----~~p~---------~~~~-~---~---~~Ai~~aL~~AGl~~~DID~~eihdafa~~ 367 (462)
.++...... +.. . ..|. .+.. + + ...++++++++ +.++|||+|-+|+.+...
T Consensus 174 ~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~-l~~~did~~v~Hq~~~~i 252 (321)
T 3il6_A 174 HFLNEKLQADGQRWTALTSGYTINESPFYQGHKQASKTLQMEGRSIFDFAIKDVSQNILSL-VTDETVDYLLLHQANVRI 252 (321)
T ss_dssp CEEEEEEEECGGGGGGEECCCCCCCSTTCCCCCCCCCSCEECHHHHHHHHHHHHHHHHHTT-CCGGGCSEEEECCSCHHH
T ss_pred CEEEEEEEEcCCCCCeEEeCCCCCCCCCCccccccccceeechHHHHHHHHHHHHHHHHHH-cCcccCCEEEEcCCCHHH
Confidence 122211111 100 0 0010 0000 1 1 12334444433 348999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEE
Q 012506 368 FVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVF 436 (462)
Q Consensus 368 ~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~ 436 (462)
...+.+.||++++++..+ .--+||...++-...+.+++.+-+-+.|+.++.|... .|.|+.++.++
T Consensus 253 ~~~~~~~lgl~~ek~~~~--l~~~GNt~sasi~~~L~~~~~~g~~~~G~~d~vll~~-fG~G~t~~~~~ 318 (321)
T 3il6_A 253 IDKIARKTKISREKFLTN--MDKYGNTSAASIPILLDEAVENGTLILGSQQRVVLTG-FGGGLTWGSLL 318 (321)
T ss_dssp HHHHHHHHTCCGGGBCCC--GGGTCBCGGGHHHHHHHHHHHTTSSCTTSCCEEEEEE-EETTTEEEEEE
T ss_pred HHHHHHHcCcCHHHhhhh--HhhcccHHHHHHHHHHHHHHHhCCCCCCCCCEEEEEE-EehhheeEEEE
Confidence 999999999999987654 4458999988866666665543221111003444443 56676664433
|
| >3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A | Back alignment and structure |
|---|
Probab=99.83 E-value=1.2e-19 Score=186.08 Aligned_cols=251 Identities=15% Similarity=0.098 Sum_probs=170.4
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcc-eEEecCCCchHHHHHHHHHHHH
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP-VRTVNRQCSSGLQAVADVAAAI 152 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p-~~~v~~~CsSgl~Ai~~Aa~~I 152 (462)
+..+|+.+|+++||+++|+++++||.|++++..+ .. .+..+..++..+|++..++ +++++.+|+|+++||..|+.+|
T Consensus 95 ~~~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~-~~-~p~~a~~v~~~LGl~~~~~~~~~~~~~C~~~~~al~~A~~~i 172 (387)
T 3oit_A 95 AVPELAAEAAKKAIAEWGRPAADITHLVVTTNSG-AH-VPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLA 172 (387)
T ss_dssp HHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSC-CE-ESCHHHHHHHHHTCCTTCEEEEEECCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCC-CC-cccHHHHHHHHhCCCCCcceeeEECchhHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999877 43 6788999999999975443 8999999999999999999999
Q ss_pred HccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcC
Q 012506 153 KAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAG 232 (462)
Q Consensus 153 ~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g 232 (462)
++|.++.|||+|+|.+|....
T Consensus 173 ~sg~~~~vLvvg~E~~s~~~~----------------------------------------------------------- 193 (387)
T 3oit_A 173 ENSRGARVLVVAAELTLMYFT----------------------------------------------------------- 193 (387)
T ss_dssp HSSTTCEEEEEEEECGGGTCC-----------------------------------------------------------
T ss_pred hcCCCCEEEEEEEeccchhcc-----------------------------------------------------------
Confidence 999999999999999973110
Q ss_pred CCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhc
Q 012506 233 KFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRK 312 (462)
Q Consensus 233 ~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~ 312 (462)
+|.. .+.++ ...+...+|||+|+||.+.+. .
T Consensus 194 --------------~~~d-----------------~~~~~---------------~~~~~lFGDGAaA~vl~~~~~--~- 224 (387)
T 3oit_A 194 --------------GPDE-----------------GCFRT---------------LLVQGLFGDGAAAVIVGADAD--D- 224 (387)
T ss_dssp --------------CCCS-----------------SSCHH---------------HHHHHHBCCEEEEEEEESSCC--S-
T ss_pred --------------Cccc-----------------cchHh---------------hhcccccccceEEEEEecCCC--c-
Confidence 0000 00000 001222699999999987541 1
Q ss_pred CCCceEEEEEEEEeccCC--CC-------------CCc--------cHHHHHHHHHHHc----CCCCCCcc--EEEecCC
Q 012506 313 GLPILGVFRTFAAVGVDP--AI-------------MGV--------GPAVAIPAAVKSA----GLQLDDID--LFEINEA 363 (462)
Q Consensus 313 g~~~~~~i~g~~~~~~~p--~~-------------~~~--------~~~~Ai~~aL~~A----Gl~~~DID--~~eihda 363 (462)
...+..++.+.+....+. .. +.. ....++.++|+++ |++ ||| +|-+|++
T Consensus 225 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~~~~~L~~~~~~~gl~--d~d~~~~v~Hq~ 302 (387)
T 3oit_A 225 VERPLFEIVSAAQTIIPESDHALNMRFTERRLDGVLGRQVPGLIGDNVERCLLDMFGPLLGGDGGG--GWNDLFWAVHPG 302 (387)
T ss_dssp SCCCCEEEEEEEEEECTTCTTSEEEEECSSSEEEEECTTHHHHHHHHHHHHHHHHTGGGCC--------GGGSEEEECCC
T ss_pred ccCCceEEEecccEEeCCChhhccceeecCCeEEEECcHHHHHHHHHHHHHHHHHHHhhcccCCCC--cccccEEEECCC
Confidence 112233555443321110 00 000 1134667788888 988 666 9999999
Q ss_pred CHHHHHHHHHHcCCCCCCCCCC-CCccccCCccchHHHHHHHHHHHHHHhcCC----CCcEEEEEeecccceeE-EEEEE
Q 012506 364 FASQFVYCRNKLGLDPEKINVN-GGALAIGHPLGTTGARCVATLLHEMKRRGR----DCRFGVISMCIGTGMGA-AAVFE 437 (462)
Q Consensus 364 fa~~~~~~~e~LGl~~~~vn~~-GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~----~~~~gl~~~~~G~G~g~-A~v~~ 437 (462)
+..+...+.++|||+++++..+ --.--+||...||-...+.++..+ +-+.| +.+++|... .|.|+.+ +++|+
T Consensus 303 n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsip~~L~~~~~~-~~~~G~~g~~~d~vll~~-fG~G~t~~~~ll~ 380 (387)
T 3oit_A 303 SSTIMDQVDAALGLEPGKLAASRRVLSDYGNMSGATVIFALDELRRQ-RKEAAAAGEWPELGVMMA-FGPGMTVDAMLLH 380 (387)
T ss_dssp CHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHC-----------CCEEEEEE-EETTTEEEEEEEE
T ss_pred CHHHHHHHHHHcCCCHHHHHHHHHHHHHhCchHHhHHHHHHHHHHHh-hhccCCCCCCCCEEEEEE-ecccceeeeeeeE
Confidence 9999999999999999987542 112338999999977777766544 11111 014566654 6777776 45665
Q ss_pred e
Q 012506 438 R 438 (462)
Q Consensus 438 ~ 438 (462)
.
T Consensus 381 ~ 381 (387)
T 3oit_A 381 A 381 (387)
T ss_dssp E
T ss_pred e
Confidence 4
|
| >3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A | Back alignment and structure |
|---|
Probab=99.83 E-value=3.6e-19 Score=182.93 Aligned_cols=255 Identities=15% Similarity=0.129 Sum_probs=178.2
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcc-eEEecCCCchHHHHHHHHHHHH
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP-VRTVNRQCSSGLQAVADVAAAI 152 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p-~~~v~~~CsSgl~Ai~~Aa~~I 152 (462)
+..+|+.+|+++||+++|+++++||.|++++..+ .. .+..+..++..+|++...+ +++++.+|+|+++||..|+.+|
T Consensus 101 ~~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~t~-~~-~p~~a~~v~~~LGl~~~~~~~~~v~~~C~g~~~al~~A~~~i 178 (393)
T 3ov2_A 101 EIPRLAKEAAEKAIKEWGRPKSEITHLVFCSISG-ID-MPGADYRLATLLGLPLTVNRLMIYSQACHMGAAMLRIAKDLA 178 (393)
T ss_dssp HHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSC-CC-BSCHHHHHHHHHTCCTTSEEEEEESCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCC-CC-CCCHHHHHHHHcCCCCCcceeeEEcCccHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999887 43 6788999999999975443 8999999999999999999999
Q ss_pred HccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcC
Q 012506 153 KAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAG 232 (462)
Q Consensus 153 ~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g 232 (462)
++|.++.|||+|+|.+|....
T Consensus 179 ~sg~~~~vLvvg~E~~s~~~~----------------------------------------------------------- 199 (393)
T 3ov2_A 179 ENNRGARVLVVACEITVLSFR----------------------------------------------------------- 199 (393)
T ss_dssp HHSTTCEEEEEEEECGGGTCC-----------------------------------------------------------
T ss_pred HcCCCCEEEEEEEeccchhcc-----------------------------------------------------------
Confidence 999999999999999974110
Q ss_pred CCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhc
Q 012506 233 KFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRK 312 (462)
Q Consensus 233 ~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~ 312 (462)
+|.. .+.+++ ..+...+|||+|+||...+.. ..
T Consensus 200 --------------~~~d-----------------~~~~~~---------------~~~~lFGDGAaA~vl~~~~~~-~~ 232 (393)
T 3ov2_A 200 --------------GPNE-----------------GDFEAL---------------AGQAGFGDGAGAVVVGADPLE-GI 232 (393)
T ss_dssp --------------CCCT-----------------TCHHHH---------------HHHHHBCCEEEEEEEESSCCT-TT
T ss_pred --------------CCcc-----------------cchhhh---------------cccccccCccEEEEEEecCCC-cc
Confidence 0000 000000 011225899999999875431 11
Q ss_pred CCCceEEEEEEEEeccCCC---------------CCCc--------cHHHHHHHHHHHcCCCC-CCccEEEecCCCHHHH
Q 012506 313 GLPILGVFRTFAAVGVDPA---------------IMGV--------GPAVAIPAAVKSAGLQL-DDIDLFEINEAFASQF 368 (462)
Q Consensus 313 g~~~~~~i~g~~~~~~~p~---------------~~~~--------~~~~Ai~~aL~~AGl~~-~DID~~eihdafa~~~ 368 (462)
..+.-.+...+....+.. .|.. ....++.++|+++|+++ +|| +|-+|+++..+.
T Consensus 233 -~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~v~Hq~n~~i~ 310 (393)
T 3ov2_A 233 -EKPIYEIAAAMQETVAESQGAVGGHLRAFGWTFYFLNQLPAIIADNLGRSLERALAPLGVREWNDV-FWVAHPGNWAII 310 (393)
T ss_dssp -CCCSEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHTTSHHHHHHHHGGGTCCSGGGS-EEEECCCCHHHH
T ss_pred -cCceeEEEecCcEEecCCcccCceeeeCCceEEEECcHHHHHHHHHHHHHHHHHHHHcCCCcccCc-EEEECCCChHHH
Confidence 112223333322111100 0110 12357889999999997 888 899999999999
Q ss_pred HHHHHHcCCCCCCCCCC-CCccccCCccchHHHHHHHHHHHHHHhcC----C-CCcEEEEEeecccceeE-EEEEEec
Q 012506 369 VYCRNKLGLDPEKINVN-GGALAIGHPLGTTGARCVATLLHEMKRRG----R-DCRFGVISMCIGTGMGA-AAVFERG 439 (462)
Q Consensus 369 ~~~~e~LGl~~~~vn~~-GG~~a~Ghp~gatG~~~~~~~~~qL~~~~----~-~~~~gl~~~~~G~G~g~-A~v~~~~ 439 (462)
..+.+.|||+++++..+ --.--+||...||-...+.+++.+...++ | +.++.|... .|.|+.+ +++|+..
T Consensus 311 ~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsip~~L~~~~~~~~~~g~~~~G~~~d~vll~~-fG~G~t~~~~ll~~~ 387 (393)
T 3ov2_A 311 DAIEAKLQLSPDKLSTARHVFTEYGNMQSATVYFVMDELRKRSAVEGRSTTGDGLQWGVLLG-FGPGLSIETVVLRSM 387 (393)
T ss_dssp HHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCSBTTTTCSEEEEEE-EETTTEEEEEEEEEC
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHhCChHHhHHHHHHHHHHHhhhhcCCcCCCCCCCeEEEEE-ECccceeeeeeeEEc
Confidence 99999999999987542 01223899999998777777776521111 1 114556554 6777776 4566543
|
| >3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.3e-18 Score=179.47 Aligned_cols=253 Identities=11% Similarity=0.061 Sum_probs=178.6
Q ss_pred eecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEe-cC
Q 012506 58 YRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTV-NR 136 (462)
Q Consensus 58 ~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v-~~ 136 (462)
.+|++.++ +..+. .+..+|+.+|+++||+++|+++++||.|++++.++. . .+..+..++..+|++..++.+++ +.
T Consensus 122 ~rtgi~~R-~~~~~-~~~~~La~~Aa~~AL~~agi~~~dId~li~~t~t~~-~-~P~~a~~v~~~LGl~~~~~~~~v~~~ 197 (413)
T 3v7i_A 122 ASQTVQER-TAPAW-EAVQAYGERAARGALQIAGLDVADVDCLITSNSTTP-A-LPGLDVALANRLPLRGDTMLLPATQW 197 (413)
T ss_dssp CCCCHHHH-HHHHH-HHHHHHHHHHHHHHHHHHTCCGGGCCEEEEECCSSC-C-SSCHHHHHHHHTTCCTTCEEEEESSC
T ss_pred cCCCHHHh-Ccccc-cCHHHHHHHHHHHHHHHhCcCHHHCCEEEEEccCCC-C-cCHHHHHHHHHhCCCCCceEEEeeCC
Confidence 45666542 22222 368899999999999999999999999999998874 3 67889999999999766888999 99
Q ss_pred CCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHH
Q 012506 137 QCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQ 216 (462)
Q Consensus 137 ~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~ 216 (462)
+|+|+++||..|+.+|++|.+++|||+|+|.||... .
T Consensus 198 ~Cagg~~AL~~A~~~i~ag~~~~vLvvg~E~~S~~~-~------------------------------------------ 234 (413)
T 3v7i_A 198 ACVAGTRSLALAADLVAADPDRVVLVVISEALSTTY-Q------------------------------------------ 234 (413)
T ss_dssp GGGHHHHHHHHHHHHHHHCTTCEEEEEEEECGGGGC-C------------------------------------------
T ss_pred ccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccccc-C------------------------------------------
Confidence 999999999999999999999999999999998621 0
Q ss_pred HHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCC
Q 012506 217 AAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSD 296 (462)
Q Consensus 217 ~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sD 296 (462)
|. | .+.+++ ..+...+|
T Consensus 235 -------------------------------~~-----------d------~~~~~l---------------v~~~LFGD 251 (413)
T 3v7i_A 235 -------------------------------PA-----------D------DTLESL---------------IVRLLFAD 251 (413)
T ss_dssp -------------------------------SS-----------C------CSTTHH---------------HHHHHBCC
T ss_pred -------------------------------cc-----------c------cchhhh---------------hcceeecc
Confidence 00 0 000000 01122599
Q ss_pred cceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCCC----------------CC-c------cHHHHHHHHHH------H
Q 012506 297 GAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPAI----------------MG-V------GPAVAIPAAVK------S 347 (462)
Q Consensus 297 GAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~~----------------~~-~------~~~~Ai~~aL~------~ 347 (462)
||+|+||.+.+.. .+.-++.+...... |.. |. . ....++.++|+ +
T Consensus 252 GAaAvvl~~~~~~-----~~~~~l~~~~~~~~-p~~~~~~~~~~~~~g~~~~m~~~v~~~v~~~~~~i~~~L~~~~~~~~ 325 (413)
T 3v7i_A 252 TAVAAVVTGRPRP-----ESVLRLDAAWHHTL-PGTRDLHRLETRADGTHFVMDRRGPRAVQETVTAMWEWLRVRYEDDP 325 (413)
T ss_dssp EEEEEEEESSCCT-----TEEEEEEEEEEEEC-TTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTSSSC
T ss_pred ccEEEEEEecCCC-----CCCEEEEccccEEe-CCCccccCccccCCceEEEECcHHHHHHHHHHHHHHHHHhhcccccc
Confidence 9999999875421 11223444332111 100 00 0 12357778899 8
Q ss_pred cCCCCCCccEEEecCCCHHHHHHHHHHcC--CCCCCCC---CCCCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEE
Q 012506 348 AGLQLDDIDLFEINEAFASQFVYCRNKLG--LDPEKIN---VNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVI 422 (462)
Q Consensus 348 AGl~~~DID~~eihdafa~~~~~~~e~LG--l~~~~vn---~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~ 422 (462)
+|++ ||+|-+|+.+......+.+.|| |+++++. .+ .- +||...||-...+.+++ +-+-+.| +++|.
T Consensus 326 ~gl~---id~~v~Hq~~~~il~~v~~~Lg~~l~~ek~~~s~~~--l~-~GNtssAsi~~~L~~~~-~~~~~~G--d~vll 396 (413)
T 3v7i_A 326 SSWH---PDVLLAHPGGTRVLEYMEQTMPDEWPSGLLSYSRDS--YT-SGNRGGAAVFDILRRAH-DAGQKTG--SRAVL 396 (413)
T ss_dssp TTCC---CCEEEEECSSHHHHHHHHHHSCSSCCSCSTHHHHHH--HT-TCBCGGGHHHHHHHHHH-HHCCCTT--CEEEE
T ss_pred CCCc---eeEEEECCCChHHHHHHHHHhCCCCCHHHhhccceE--ec-eeChHHHHHHHHHHHHH-hCCCCCC--CEEEE
Confidence 9998 9999999999999999999999 9999872 22 23 78888888766666665 2111233 66666
Q ss_pred EeecccceeEEEEE
Q 012506 423 SMCIGTGMGAAAVF 436 (462)
Q Consensus 423 ~~~~G~G~g~A~v~ 436 (462)
.. .|.|+.+..++
T Consensus 397 ~~-fG~Glt~~~~l 409 (413)
T 3v7i_A 397 YA-AAPGLTATALE 409 (413)
T ss_dssp EE-EETTTEEEEEE
T ss_pred EE-ECHHHhHhhhh
Confidence 54 67777765443
|
| >3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A | Back alignment and structure |
|---|
Probab=99.82 E-value=6.1e-19 Score=180.83 Aligned_cols=254 Identities=13% Similarity=0.077 Sum_probs=179.6
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcc-eEEecCCCchHHHHHHHHHHH
Q 012506 73 TYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP-VRTVNRQCSSGLQAVADVAAA 151 (462)
Q Consensus 73 ~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p-~~~v~~~CsSgl~Ai~~Aa~~ 151 (462)
.+..+|+.+|+++||+++|+++++||.|++++..+. . .+..+..++..+|++..++ +++++.+|+|+++||..|+++
T Consensus 96 ~~~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~~-~-~p~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~ 173 (387)
T 3a5r_A 96 KGVAELGKEAALKAIKEWGQPKSKITHLIVCCLAGV-D-MPGADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKDI 173 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCC-E-ESCHHHHHHHHTTCCTTCEEEEEESCCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCC-C-CCcHHHHHHHHcCcCCCcceeeeEccccHHHHHHHHHHHHH
Confidence 467899999999999999999999999999988752 2 5678999999999975454 899999999999999999999
Q ss_pred HHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHc
Q 012506 152 IKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAA 231 (462)
Q Consensus 152 I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~ 231 (462)
|++|.+++|||+|+|.+|....
T Consensus 174 i~~g~~~~vLvvg~e~~s~~~~---------------------------------------------------------- 195 (387)
T 3a5r_A 174 AENNKGARVLIVCSEMTTTCFR---------------------------------------------------------- 195 (387)
T ss_dssp HHHSTTCEEEEEEEECCTTTCC----------------------------------------------------------
T ss_pred HHhCCCCEEEEEEEeccchhhc----------------------------------------------------------
Confidence 9999999999999999876210
Q ss_pred CCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHh
Q 012506 232 GKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMR 311 (462)
Q Consensus 232 g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~ 311 (462)
+|.. ... -....+...+|||+|+||.+.+..
T Consensus 196 ---------------~~~d-----------~~~---------------------~~~~~~~lfGDGA~A~vl~~~~~~-- 226 (387)
T 3a5r_A 196 ---------------GPSE-----------THL---------------------DSMIGQAILGDGAAAVIVGADPDL-- 226 (387)
T ss_dssp ---------------CCCS-----------SCC---------------------SSTTHHHHBCCEEEEEEEESSCCT--
T ss_pred ---------------CCCc-----------cch---------------------hhccccceeccceeEEEEecCCCc--
Confidence 0100 000 000112236999999999875421
Q ss_pred cC-CCceEEEEEEEEeccCCC---C-------------CCc--------cHHHHHHHHHHHcCCC-CCCccEEEecCCCH
Q 012506 312 KG-LPILGVFRTFAAVGVDPA---I-------------MGV--------GPAVAIPAAVKSAGLQ-LDDIDLFEINEAFA 365 (462)
Q Consensus 312 ~g-~~~~~~i~g~~~~~~~p~---~-------------~~~--------~~~~Ai~~aL~~AGl~-~~DID~~eihdafa 365 (462)
+ ..+..++.+.+.... |. . ++. ....+++++|+++|++ .+|| +|-+|+++.
T Consensus 227 -~~~~~~~~l~~~~~~~~-p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~ 303 (387)
T 3a5r_A 227 -TVERPIFELVSTAQTIV-PESHGAIEGHLLESGLSFHLYKTVPTLISNNIKTCLSDAFTPLNISDWNSL-FWIAHPGGP 303 (387)
T ss_dssp -TTCCCCEEEEEEEEEEC-TTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCCGGGS-EEEECCSCH
T ss_pred -cccCCceEEEeeeEEEe-CCChHhcCceEcCCCeEEEecchHHHHHHHHHHHHHHHHHHhcCCCChhhe-eEEECCCCH
Confidence 2 111234544433211 11 0 110 1135778899999998 8899 899999999
Q ss_pred HHHHHHHHHcCCCCCCCCCC-CCccccCCccchHHHHHHHHHHHHHHhcC----CC-CcEEEEEeecccceeE-EEEEEe
Q 012506 366 SQFVYCRNKLGLDPEKINVN-GGALAIGHPLGTTGARCVATLLHEMKRRG----RD-CRFGVISMCIGTGMGA-AAVFER 438 (462)
Q Consensus 366 ~~~~~~~e~LGl~~~~vn~~-GG~~a~Ghp~gatG~~~~~~~~~qL~~~~----~~-~~~gl~~~~~G~G~g~-A~v~~~ 438 (462)
.....+.+.||++++++..+ --.-.+||..+|+-...+.+++.+-++++ |+ .++.|... .|.|+.+ +++|+.
T Consensus 304 ~i~~~~~~~lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~~~G~~~~G~~~d~vll~~-fG~G~t~~~~ll~~ 382 (387)
T 3a5r_A 304 AILDQVTAKVGLEKEKLKVTRQVLKDYGNMSSATVFFIMDEMRKKSLENGQATTGEGLEWGVLFG-FGPGITVETVVLRS 382 (387)
T ss_dssp HHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCSBTTTTCSEEEEEE-EETTTEEEEEEEEE
T ss_pred HHHHHHHHHcCCChHHhHHHHHHHHhcCCcchhHHHHHHHHHHHhccccCCCCCCCCcceEEEEE-ecCcceeeehhhee
Confidence 88888889999998876531 01234899999999999999887765322 00 13555443 5666666 445554
Q ss_pred c
Q 012506 439 G 439 (462)
Q Consensus 439 ~ 439 (462)
.
T Consensus 383 ~ 383 (387)
T 3a5r_A 383 V 383 (387)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A | Back alignment and structure |
|---|
Probab=99.81 E-value=1.8e-18 Score=178.91 Aligned_cols=253 Identities=13% Similarity=0.081 Sum_probs=178.2
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcc-eEEecCCCchHHHHHHHHHHHH
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP-VRTVNRQCSSGLQAVADVAAAI 152 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p-~~~v~~~CsSgl~Ai~~Aa~~I 152 (462)
+..+|+.+|+++||+++|+++++||.|++++.++. . .+..+..++..+|++..++ +++++.+|+|+++||..|+++|
T Consensus 124 ~~~~La~~Aa~~AL~~agl~~~~Id~li~~t~~~~-~-~p~~a~~v~~~lGl~~~~~~~~~v~~aCas~~~AL~~A~~~i 201 (413)
T 1xes_A 124 EVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTP-D-LPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLA 201 (413)
T ss_dssp HHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESCCC-E-ESCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCC-c-cchHHHHHHHHcCcCCccchhceecCccHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999998763 2 5678899999999975454 9999999999999999999999
Q ss_pred HccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcC
Q 012506 153 KAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAG 232 (462)
Q Consensus 153 ~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g 232 (462)
++|.+++|||+|+|.+|.....+. + .
T Consensus 202 ~~G~~~~vLvvg~E~~s~~~~~~~-----------d-----~-------------------------------------- 227 (413)
T 1xes_A 202 ENNRGARVLVICSETTAVTFRGPS-----------E-----T-------------------------------------- 227 (413)
T ss_dssp HTSTTCCEEEEEEECTTTTCCCCC-----------T-----T--------------------------------------
T ss_pred HcCCCCEEEEEEehhhhhhhcCCC-----------c-----c--------------------------------------
Confidence 999999999999999876211000 0 0
Q ss_pred CCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhc
Q 012506 233 KFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRK 312 (462)
Q Consensus 233 ~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~ 312 (462)
..++ ..++...+|||+|+||.+.+..
T Consensus 228 ------------------------------------~~~~---------------~~~~~lfGDGA~A~vl~~~~~~--- 253 (413)
T 1xes_A 228 ------------------------------------HLDS---------------LVGQALFGDGASALIVGADPIP--- 253 (413)
T ss_dssp ------------------------------------CHHH---------------HHHHHHBCCEEEEEEEESSCCT---
T ss_pred ------------------------------------chhh---------------cccceeEecccEEEEEecCCCc---
Confidence 0000 0011126899999999875421
Q ss_pred CC-CceEEEEEEEEeccCC--C-------------CCCc--------cHHHHHHHHHHHcCCC-CCCccEEEecCCCHHH
Q 012506 313 GL-PILGVFRTFAAVGVDP--A-------------IMGV--------GPAVAIPAAVKSAGLQ-LDDIDLFEINEAFASQ 367 (462)
Q Consensus 313 g~-~~~~~i~g~~~~~~~p--~-------------~~~~--------~~~~Ai~~aL~~AGl~-~~DID~~eihdafa~~ 367 (462)
++ .+..++.+.+....+. . .++. ....+++++|+++|++ .+|| +|-+|+++...
T Consensus 254 ~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~i 332 (413)
T 1xes_A 254 QVEKACFEIVWTAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDWNKL-FWVVHPGGRAI 332 (413)
T ss_dssp TTSCCSEEEEEEEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCCGGGS-EEEECCSCHHH
T ss_pred cccCCceEEEeeeeEEcCCChhhcCcEEecCceEEEecccHHHHHHHHHHHHHHHHHHhcCCCCccce-eEEECCCCHHH
Confidence 21 1123455444321100 0 0110 1235778899999998 8888 89999999988
Q ss_pred HHHHHHHcCCCCCCCCCC-CCccccCCccchHHHHHHHHHHHHHHhcC----CC-CcEEEEEeecccceeEE-EEEEe
Q 012506 368 FVYCRNKLGLDPEKINVN-GGALAIGHPLGTTGARCVATLLHEMKRRG----RD-CRFGVISMCIGTGMGAA-AVFER 438 (462)
Q Consensus 368 ~~~~~e~LGl~~~~vn~~-GG~~a~Ghp~gatG~~~~~~~~~qL~~~~----~~-~~~gl~~~~~G~G~g~A-~v~~~ 438 (462)
...+.+.||++++++..+ --.--+||...|+-...+.+++.+-++++ |+ .++.|... .|.|+.+. ++|+.
T Consensus 333 ~~~~~~~Lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~~~G~~~~G~~~d~vll~~-fG~G~t~~~~ll~~ 409 (413)
T 1xes_A 333 LDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGCSTTGEGLEMGVLFG-FGPGLTIETVVLKS 409 (413)
T ss_dssp HHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCSBTTTTCSEEEEEE-EETTTEEEEEEEEE
T ss_pred HHHHHHHcCCChHHhHHHHHHHHhcCcCchhhHHHHHHHHHHhccccCCCCCCCCcceEEEEE-ecCCcEEeEEEEEe
Confidence 888899999999987431 00233899999999999999887765322 00 13555543 56666664 45543
|
| >3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.9e-19 Score=188.15 Aligned_cols=256 Identities=17% Similarity=0.155 Sum_probs=170.6
Q ss_pred HHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEe-cCCCchHHHHHHHHHHHHHc
Q 012506 76 DDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTV-NRQCSSGLQAVADVAAAIKA 154 (462)
Q Consensus 76 ~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v-~~~CsSgl~Ai~~Aa~~I~s 154 (462)
.+|+.+|+++||+++|+++++||.|++++.. +.. .+..+.+++..+|++....+++| +.+|+++++||..|.++|++
T Consensus 111 ~~La~~Aa~~AL~~agi~~~dId~li~~t~t-~~~-~P~~a~~v~~~LGl~~~~~~~dv~~~~Csgg~~AL~~A~~~i~a 188 (465)
T 3e1h_A 111 VPLAVEASRKAMAEARLVPAQITHMVSTTCT-DSA-NPGYDHYVAKELGLSDRLEKVLLHGIGCSGGLAALRTAANLCLG 188 (465)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCEEEEECSS-CCC-SSCHHHHHHHHHTCCTTCEEEEECSCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeeC-CCC-CCcHHHHHHHHhCCCCCeeEEEecCCcchHHHHHHHHHHHHHhc
Confidence 5999999999999999999999999999987 443 67889999999999744448999 79999999999999999997
Q ss_pred ----cCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Q 012506 155 ----GFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 230 (462)
Q Consensus 155 ----G~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~ 230 (462)
|.++.|||+|+|.+|.. .+.. .+ +..+
T Consensus 189 ~~~~G~~~~vLVvg~E~~S~~------------~~~~--------------------------~~-----~~~~------ 219 (465)
T 3e1h_A 189 HTARGKPARILVLALEVSTTM------------VRSE--------------------------LE-----SIDA------ 219 (465)
T ss_dssp HHHTTCCCEEEEEEEECCGGG------------HHHH--------------------------HH-----HHHH------
T ss_pred ccccCCCCEEEEEEEeecchh------------cCcc--------------------------cc-----cccc------
Confidence 99999999999998761 0000 00 0000
Q ss_pred cCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHH
Q 012506 231 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 310 (462)
Q Consensus 231 ~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~ 310 (462)
.. + ....+...+|||+|+||.+.+...
T Consensus 220 -----------------~~-----------~-------------------------d~~t~~LFGDGAaAvVl~~~~~~~ 246 (465)
T 3e1h_A 220 -----------------LQ-----------E-------------------------TRIGIALFSDCASAVILSNGIGEA 246 (465)
T ss_dssp -----------------HT-----------C-------------------------CCCHHHHBCCEEEEEEEECCTTCC
T ss_pred -----------------cc-----------c-------------------------ccccccccccceeEEEEEccCCCc
Confidence 00 0 001122369999999998753211
Q ss_pred hcCCCceEEEEEEEEeccCC--CC-------------CCc--------cHHHHHHHHHHH-------cCCCCCCccEEEe
Q 012506 311 RKGLPILGVFRTFAAVGVDP--AI-------------MGV--------GPAVAIPAAVKS-------AGLQLDDIDLFEI 360 (462)
Q Consensus 311 ~~g~~~~~~i~g~~~~~~~p--~~-------------~~~--------~~~~Ai~~aL~~-------AGl~~~DID~~ei 360 (462)
....+...+.++.....+. .. .+. ....++.++|++ +|++++|||+| +
T Consensus 247 -~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~g~~V~~~a~~~v~~~i~~~L~~~g~~L~~agl~~~DId~~-~ 324 (465)
T 3e1h_A 247 -PGKPAIYDLLGWENRVIPDSEHDLGFDVDPMGWKVVLSPRVPVLAKASLQPTYADLLSSLQDQLPSSYQKPADFDWA-M 324 (465)
T ss_dssp -TTCCCSEEEEEEEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHHGGGSCTTSCSGGGSEEE-E
T ss_pred -cccccceeeccceEEEecCCccccCccccCCCceEecChHHHHHHHHHHHHHHHHHHHhccccccccCCCHHHceEE-e
Confidence 0012233455443321110 00 000 113567778887 68999999999 9
Q ss_pred cCCCHHHHHHHHHHcCCCCCCCCCCCCc-cccCCccchHHHHHHHHHHHH----HHhcCCCCcEEEEEeecccceeEE-E
Q 012506 361 NEAFASQFVYCRNKLGLDPEKINVNGGA-LAIGHPLGTTGARCVATLLHE----MKRRGRDCRFGVISMCIGTGMGAA-A 434 (462)
Q Consensus 361 hdafa~~~~~~~e~LGl~~~~vn~~GG~-~a~Ghp~gatG~~~~~~~~~q----L~~~~~~~~~gl~~~~~G~G~g~A-~ 434 (462)
|+++..+...+.++|||+++++..+=-. --+||...||-...+.+++.+ ++..+...+++|... .|.|+.+. +
T Consensus 325 Hqan~rIl~~v~~~Lgl~~ek~~~s~~~l~~yGNtsSASip~aL~~~~~~~~g~l~~Gg~~~d~vll~g-fG~Glt~~~~ 403 (465)
T 3e1h_A 325 HPGGATILSGAESAMGLTPEHMRASYDRYINHGNSSSATIFSVLNRLREKDMDALAPGGKVKEYVVGCA-FGPGINVEMC 403 (465)
T ss_dssp CCSSHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHTSTTTTSCSSSSCCCSEEEEEE-EETTTEEEEE
T ss_pred cCCChHHHHHHHHHhCcCHHHhHHHHHHHhcceechHhHHHHHHHHHHHhcccccCCCCCCCCEEEEEE-EhHHHhhhhe
Confidence 9999999999999999999987432111 125888888855555554432 111100115566554 67777764 4
Q ss_pred EEEe
Q 012506 435 VFER 438 (462)
Q Consensus 435 v~~~ 438 (462)
+|+.
T Consensus 404 llr~ 407 (465)
T 3e1h_A 404 MLKR 407 (465)
T ss_dssp EEEE
T ss_pred eeEE
Confidence 5544
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=4.2e-19 Score=216.86 Aligned_cols=264 Identities=20% Similarity=0.234 Sum_probs=193.5
Q ss_pred HHHHHHHHHHHHHHcCCCccccC----cEEEEeccCCCC------------------ccccHHHHHHHHcCCCCCcceEE
Q 012506 76 DDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS------------------QRASECRMAAFYAGFPETVPVRT 133 (462)
Q Consensus 76 ~eL~~~A~~~Al~~agl~~~~Id----~vivG~~~~~~~------------------~~~~~a~~~a~~~Glp~~~p~~~ 133 (462)
..|+.+++.+||++||++++.++ +|++|+...++. .....+..++..+|+ ++|+++
T Consensus 79 ~rl~l~~~~eAle~Ag~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~~~l--~Gps~t 156 (2512)
T 2vz8_A 79 LRMLLEVTYEAIVDGGINPASLRGTSTGVWVGVSSSDASEALSRDPETLVGYSMIGCQRAMMANRLSFFFDF--KGPSIT 156 (2512)
T ss_dssp HHHHHHHHHHHHGGGTCCGGGGTTCSCEEEEEECCCHHHHHTTSCTTTSCGGGGGGTSTTHHHHHHHHHHTC--CSCEEE
T ss_pred HHHHHHHHHHHHHHCCCChhhcCCCCeEEEEEeccHHHHHHHhcCccccCcceecccchhHHHHHHHHHhCC--CCCcee
Confidence 45889999999999999988775 588887544320 012357789999999 799999
Q ss_pred ecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHH
Q 012506 134 VNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKE 213 (462)
Q Consensus 134 v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~ 213 (462)
|+++|||++.||++|++.|++|++|++||+|++.+... . ...+
T Consensus 157 v~tACsSsl~Al~~A~~~l~~g~~d~al~gG~~~~~~p----------~-----------~~~~---------------- 199 (2512)
T 2vz8_A 157 IDTACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLKP----------N-----------SSLQ---------------- 199 (2512)
T ss_dssp EECTTSTHHHHHHHHHHHHHTSSCSEEEEEEEECCCCH----------H-----------HHHH----------------
T ss_pred eccHhHHHHHHHHHHHHHHHcCCCCeeEEeEeccccCH----------H-----------HHHH----------------
Confidence 99999999999999999999999999999999987541 0 0000
Q ss_pred HHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC--CCCcccCCC
Q 012506 214 QDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK--DGTTTAGNS 291 (462)
Q Consensus 214 ~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p--~g~~t~~~~ 291 (462)
+.+ .| .+++|..+| | ||. +|..
T Consensus 200 --------~~~------~~------------------------~ls~~g~c~------------~-Fd~~adG~~----- 223 (2512)
T 2vz8_A 200 --------FMK------LG------------------------MLSQDGTCR------------S-FDAEGTGYC----- 223 (2512)
T ss_dssp --------HHH------TT------------------------CBCTTCSCC------------S-SSTTCCCBC-----
T ss_pred --------Hcc------CC------------------------CCCCCCCCC------------C-CCCCCCCcc-----
Confidence 000 00 123343333 3 654 4544
Q ss_pred CCcCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccCCC---C---CCccHHHHHHHHHHHcCCCCCCccEEEecCCCH
Q 012506 292 SQVSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPA---I---MGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFA 365 (462)
Q Consensus 292 s~~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~p~---~---~~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa 365 (462)
.+||++++||.+.+.|+ ++++.|+|++.+...-. . .+.+...+|+++|++|||+++||||+|.|.+.+
T Consensus 224 --~gEG~~~~vLk~l~~A~----~i~a~i~g~~~n~dg~~~~~~t~P~~~~q~~~i~~al~~ag~~p~~i~yveaHGTgT 297 (2512)
T 2vz8_A 224 --RAEAVVAVLLTKKSLAR----RVYATILNAGTNTDGSKEQGVTFPSGDVQEQLIRSLYAPAGPDPESLEYIEAHGTGT 297 (2512)
T ss_dssp --BBCEEEEEEEEEGGGCS----CCSEEEEEEEEEECCCCTTCSSSCCHHHHHHHHHTTSGGGSSCTTSCCEEECCCCCC
T ss_pred --eeeeEEEEEEEEHHHCC----cccEEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEeecCCC
Confidence 79999999999999886 59999999998754321 1 123446899999999999999999999999887
Q ss_pred HH----HHH-HHHHcCCCC-CCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCC------------------------
Q 012506 366 SQ----FVY-CRNKLGLDP-EKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGR------------------------ 415 (462)
Q Consensus 366 ~~----~~~-~~e~LGl~~-~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~------------------------ 415 (462)
.. +.. +.+.+|-.. .|+.+..-+..+||..+|+|+..++.++..|+++.-
T Consensus 298 ~~gD~~E~~al~~~f~~~~~~~~~igS~Ks~iGH~~~AaG~~~~ik~~l~l~~~~ipp~~~~~~~~p~~~~~~~~~~~~~ 377 (2512)
T 2vz8_A 298 KVGDPQELNGIVNALCATRREPLLIGSTKSNMGHPEPASGVAALIKVLLSLEHGVWAPNLHYHTPNPEIPALQDGRLQVV 377 (2512)
T ss_dssp TTHHHHHHHHHHHHHCSCSSSCCEEECHHHHHCBCGGGHHHHHHHHHHHHHTTTBCCCCSSCCSCCTTSSSSSSSSCEEC
T ss_pred CCCCHHHHHHHHHHhcccCCCCceeecccccccccccccchhHHHHHHHHHHCCCcCCCCCCCCCCccccccccCceEec
Confidence 53 333 345566432 344443334449999999999999999999987520
Q ss_pred ------CCcEEEEEeecccceeEEEEEEecc
Q 012506 416 ------DCRFGVISMCIGTGMGAAAVFERGD 440 (462)
Q Consensus 416 ------~~~~gl~~~~~G~G~g~A~v~~~~~ 440 (462)
..++++++..+.||.++++||+...
T Consensus 378 ~~~~~~~~~~a~vnsfG~gG~Nah~il~~~~ 408 (2512)
T 2vz8_A 378 DRPLPIRGGNVGINSFGFGGSNVHVILQPNS 408 (2512)
T ss_dssp CSCCBCCSCCEEEEEEETTTEEEEEEEEECC
T ss_pred CCCccCCCCeEEEeccCCCCceeEEEEccCC
Confidence 0135667777778899999998643
|
| >3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A | Back alignment and structure |
|---|
Probab=99.81 E-value=7.3e-20 Score=182.17 Aligned_cols=251 Identities=18% Similarity=0.227 Sum_probs=167.8
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHH
Q 012506 73 TYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAI 152 (462)
Q Consensus 73 ~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I 152 (462)
.+..+|+.+|+++||+++|++++|||.+++|+.++. . ..+..++..+|+ |+++|+.+|+|+++||..|+.+|
T Consensus 53 ~a~sdLa~~Aa~~AL~~AGi~~~DID~II~gt~t~q---~-~~A~~va~~Lgi----pafdV~~ACsg~~~AL~~Aa~~I 124 (347)
T 3lma_A 53 MAERKLMEDAVQSALSKQNLKKEDIDIFLAGDLLNQ---N-VTANYVARHLKI----PFLCLFGACSTSMESIAISSALI 124 (347)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCGGGCSEEEEEESSSS---S-TTHHHHHHHHCC----CEEEBCCSTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCc---h-hHHHHHHHHhCC----CEEEecChhHHHHHHHHHHHHHH
Confidence 456789999999999999999999999999998762 2 256677777765 79999999999999999999999
Q ss_pred HccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcC
Q 012506 153 KAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAG 232 (462)
Q Consensus 153 ~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g 232 (462)
++|.+++||++|+|+||+.+..+..
T Consensus 125 ~sG~~~~VLVVGaE~~S~aerq~r~------------------------------------------------------- 149 (347)
T 3lma_A 125 DGGFAKRALAATSSHNATAERQFRY------------------------------------------------------- 149 (347)
T ss_dssp HTTSCSEEEEEEEECGGGTTCCC---------------------------------------------------------
T ss_pred hcCCCCEEEEEEeccccchhhhccC-------------------------------------------------------
Confidence 9999999999999999874321100
Q ss_pred CCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhc
Q 012506 233 KFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRK 312 (462)
Q Consensus 233 ~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~ 312 (462)
|. ++...+|.+.. . ..|||+|+||.+...
T Consensus 150 ---------------p~----------------------e~g~q~p~ta~---~-------t~dGAGA~VL~~~g~---- 178 (347)
T 3lma_A 150 ---------------PT----------------------EYGGQKPGTAT---S-------TVTGSGAVVLSQQPG---- 178 (347)
T ss_dssp -------------------------------------------------------------CCCEEEEEEEESSCC----
T ss_pred ---------------cc----------------------hhcccCCchhc---E-------EccceeEEEEEecCC----
Confidence 00 00001121111 1 258999999986431
Q ss_pred CCCceEEEEEEEEe------ccCCCCCCccH----HHHHHHHHHHcCCCCCCccEEE---ecCCCHHHHHHHHHHcCCCC
Q 012506 313 GLPILGVFRTFAAV------GVDPAIMGVGP----AVAIPAAVKSAGLQLDDIDLFE---INEAFASQFVYCRNKLGLDP 379 (462)
Q Consensus 313 g~~~~~~i~g~~~~------~~~p~~~~~~~----~~Ai~~aL~~AGl~~~DID~~e---ihdafa~~~~~~~e~LGl~~ 379 (462)
.| +|.+...- ..+|..|+... ...+.+.|+++|++++|+|+|- +|+.........++++|++.
T Consensus 179 --~p--~I~~~t~Gkvvd~g~~d~~nmg~amaPaA~~ti~~~l~d~g~~~~d~D~ivtgdL~q~g~~il~~l~~~~g~~~ 254 (347)
T 3lma_A 179 --GI--KITSATVGRVIDLGITDSQDMGSAMAPAAADTIKQHLEDLGRTPDDYDLILTGDLSGVGSPILKDLLKEEGINV 254 (347)
T ss_dssp --SE--EEEEEECCCCBCCSCCCTTCHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEESCHHHHHHHHHHHHHHTTCCC
T ss_pred --CC--ceeeeeeeeeeccCCCCCCCccccchHHHHHHHHHHHHHhCCCHHHcCEEecCChHHHHHHHHHHHHHHcCCCh
Confidence 22 23333221 12555555322 3466889999999999999999 77777777788889999998
Q ss_pred CCCCCCCCccccCCc---------cchHHHHHHHHHHHHHHhcCCCCcEEEEEeeccccee--------------EEEEE
Q 012506 380 EKINVNGGALAIGHP---------LGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMG--------------AAAVF 436 (462)
Q Consensus 380 ~~vn~~GG~~a~Ghp---------~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g--------------~A~v~ 436 (462)
+++...=|.+-++.. -||+...-.-.++.+|++... ++-|+.. .|..+. =|+++
T Consensus 255 ~~~~~dcg~~iy~~~~~~~~ggsg~~csa~v~~~~~~~~~~~g~~--~ril~~~-tGalls~~~~~q~~sip~iah~v~~ 331 (347)
T 3lma_A 255 GTKHNDCGLMIYTPDQQVFAGGSGCACSAVVTFAHIFKEIEAGRL--NRVLVVA-TGALLSPTIIQQKESIPCIAHGVVF 331 (347)
T ss_dssp GGGEEEGGGTSSCC---------CCCCHHHHHHHTHHHHHHTTSC--SEEEEEE-EEECCCHHHHHTTCCCCEEEEEEEE
T ss_pred hHCccccceEEecCCCcccCCCCccccHHHHHHHHHHHHHhcCcc--cEEEEEe-cccccCcchhccCCccChhhEEEEE
Confidence 654433233334422 267777777778888885544 4444432 333322 25788
Q ss_pred Eecccccc
Q 012506 437 ERGDCADE 444 (462)
Q Consensus 437 ~~~~~~~~ 444 (462)
|+.++.+-
T Consensus 332 e~~~~~~~ 339 (347)
T 3lma_A 332 ERAERGNA 339 (347)
T ss_dssp EEC-----
T ss_pred Eeecccch
Confidence 88776653
|
| >1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=9.5e-20 Score=187.43 Aligned_cols=248 Identities=13% Similarity=0.081 Sum_probs=176.6
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHH
Q 012506 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAA 150 (462)
Q Consensus 71 ~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~ 150 (462)
.+.+..+|+.+|+++||++ +++++||.|++|+..+... .++.+..++..+|++.++++++++.+|+||+.||..|++
T Consensus 47 ~~e~~~~la~~Aa~~aL~~--~~~~~Id~li~~t~~~~~~-~p~~a~~v~~~lGl~~~~~~~~v~~aC~sg~~Al~~A~~ 123 (396)
T 1xpm_A 47 VNQDIVSMGANAAKDIITD--EDKKKIGMVIVATESAVDA-AKAAAVQIHNLLGIQPFARCFEMKEACYAATPAIQLAKD 123 (396)
T ss_dssp TTCCHHHHHHHHHHTTCCH--HHHHHEEEEEEECSSCSBS-SSCHHHHHHHHTTCCSSCEEEEEESTTTTHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhc--CCHHHCCEEEEEeCCCCCC-CCCHHHHHHHHhCCCCCceEEEeccccHHHHHHHHHHHH
Confidence 4678999999999999998 7899999999999877654 577899999999997568999999999999999999999
Q ss_pred HHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Q 012506 151 AIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 230 (462)
Q Consensus 151 ~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~ 230 (462)
+|++|.++++||+|+|. +....
T Consensus 124 ~I~sg~~~~vLvvg~e~-s~~~~--------------------------------------------------------- 145 (396)
T 1xpm_A 124 YLATRPNEKVLVIATDT-ARYGL--------------------------------------------------------- 145 (396)
T ss_dssp HHTTCTTCEEEEEEEEE-ECCCT---------------------------------------------------------
T ss_pred HHHcCCCCEEEEEeehh-hcccc---------------------------------------------------------
Confidence 99999999999999996 33100
Q ss_pred cCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHH
Q 012506 231 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 310 (462)
Q Consensus 231 ~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~ 310 (462)
+. + +....+|||+|+||.+..
T Consensus 146 ----------------~~---------------------------------~-------~~~~~GdGA~A~vl~~~~--- 166 (396)
T 1xpm_A 146 ----------------NS---------------------------------G-------GEPTQGAGAVAMVIAHNP--- 166 (396)
T ss_dssp ----------------TC---------------------------------S-------SGGGCEEEEEEEEEEESC---
T ss_pred ----------------CC---------------------------------C-------CCcccccceEEEEeccCC---
Confidence 00 0 011268999999998642
Q ss_pred hcCCCceEEEEEEEEec------cCCCC------CCcc--------HHHHHHHHHHHcCCCCCCccEEEecCCCHHHHHH
Q 012506 311 RKGLPILGVFRTFAAVG------VDPAI------MGVG--------PAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVY 370 (462)
Q Consensus 311 ~~g~~~~~~i~g~~~~~------~~p~~------~~~~--------~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~ 370 (462)
.++....+.+... ..|.. .+.. ...+++++|+++|++++|||+|.+|.++..+...
T Consensus 167 ----~i~~~~~~~g~~~~d~~~~~~p~~~~~~~~~G~~~~~~~~~~~~~~~~~~L~~agl~~~did~~~~H~~~~~~~~~ 242 (396)
T 1xpm_A 167 ----SILALNEDAVAYTEDVYDFWRPTGHKYPLVDGALSKDAYIRSFQQSWNEYAKRQGKSLADFASLCFHVPFTKMGKK 242 (396)
T ss_dssp ----SSEEECSCCEEEECCCCSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSSHHHHHH
T ss_pred ----ceEEEEeccccccceEEEeeccCCCCCeEEEcHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEecCCchHHHHH
Confidence 2333333222221 12221 1111 3568899999999999999999999999998887
Q ss_pred HHHHc-----CCCCCCCCCC-----CCccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeE-EEEEEec
Q 012506 371 CRNKL-----GLDPEKINVN-----GGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGA-AAVFERG 439 (462)
Q Consensus 371 ~~e~L-----Gl~~~~vn~~-----GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~-A~v~~~~ 439 (462)
..+.| |++++++..+ -=.--+||...+|-...+.+++.+-+-+.| .++.+++ .|.|... +.+++..
T Consensus 243 ~~~~l~~~~~~~~~e~~~~~~~~s~~~~~~~GN~~saSi~l~L~~~l~~~~l~~G-d~ill~s--~GsG~~~~~~~~~v~ 319 (396)
T 1xpm_A 243 ALESIIDNADETTQERLRSGYEDAVDYNRYVGNIYTGSLYLSLISLLENRDLQAG-ETIGLFS--YGSGSVGEFYSATLV 319 (396)
T ss_dssp HHHTTGGGSCHHHHHHHHHHHHHHTTGGGGTCCCGGGHHHHHHHHHHHHSCCCTT-CEEEEEE--EETTTEEEEEEEEEC
T ss_pred HHHHHHhhcccCCHHHHHHHhhhhhhhhhhcCchHHHHHHHHHHHHHHcCCCCCC-CEEEEEE--ECcchhheEEEEEEc
Confidence 77877 6665543100 001238999999988888887765111223 1444443 4666665 4456655
Q ss_pred cccccc
Q 012506 440 DCADEL 445 (462)
Q Consensus 440 ~~~~~~ 445 (462)
+...+.
T Consensus 320 ~~~~~~ 325 (396)
T 1xpm_A 320 EGYKDH 325 (396)
T ss_dssp TTGGGG
T ss_pred ccHHHH
Confidence 555443
|
| >2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=2.9e-18 Score=179.16 Aligned_cols=98 Identities=14% Similarity=0.156 Sum_probs=89.8
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCC--CCCcceEEecCCCchHHHHHHHH
Q 012506 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGF--PETVPVRTVNRQCSSGLQAVADV 148 (462)
Q Consensus 71 ~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Gl--p~~~p~~~v~~~CsSgl~Ai~~A 148 (462)
.+.++.+|+.+|+++||+++|+++++||.|++|+..+... .+..+..++..+|+ +.++++++++.+|+||+.||..|
T Consensus 48 ~~e~~~~La~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~-~p~~a~~v~~~lgl~g~~~~~~~~v~~aC~gg~~AL~~A 126 (450)
T 2f82_A 48 ELEDVISMSFNAVTSLLEKYKIDPKQIGRLEVGSETVIDK-SKSIKTFLMQLFEKCGNTDVEGVDSTNACYGGTAALLNC 126 (450)
T ss_dssp TTCCHHHHHHHHHHHHHHHTTCCGGGEEEEEEECCCCSCS-SSCHHHHHTHHHHTTTCCCCBCCEECSGGGHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCcCHHHCCEEEEEecCCCCC-CCcHHHHHHHHhCCcCCCCceEEEhhhhhHHHHHHHHHH
Confidence 5788999999999999999999999999999999876654 67789999999998 45789999999999999999999
Q ss_pred HHHHHccCC--CEEEEEeecCCC
Q 012506 149 AAAIKAGFY--DIGIGAGLESMT 169 (462)
Q Consensus 149 a~~I~sG~~--d~vLv~G~E~ms 169 (462)
.++|++|.+ +.|||+|+|.++
T Consensus 127 ~~~I~sg~~~~~~vLVvg~e~~~ 149 (450)
T 2f82_A 127 VNWVESNSWDGRYGLVICTDSAV 149 (450)
T ss_dssp HHHHHSTTCCSCEEEEEEEEEEC
T ss_pred HHHHHcCCCcCCeEEEEEeeecc
Confidence 999999998 999999999874
|
| >3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=4.3e-18 Score=174.44 Aligned_cols=244 Identities=13% Similarity=0.066 Sum_probs=170.7
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHH
Q 012506 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAA 150 (462)
Q Consensus 71 ~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~ 150 (462)
.+.+..+|+.+|+++||++++ +++||.|++++.+++.. .+..+..++..+|++..+++++++.+|+|++.||..|.+
T Consensus 52 ~~e~~~~La~~Aa~~aL~~a~--~~~Id~li~~t~t~~~~-~ps~a~~v~~~LGl~~~~~~~dv~~aC~gg~~AL~~A~~ 128 (388)
T 3v4n_A 52 ISQDIVTFAANAAEAILTKED--KEAIDMVIVGTESSIDE-SKAAAVVLHRLMGIQPFARSFEIKEAXYGATAGLQLAKN 128 (388)
T ss_dssp TTCCHHHHHHHHHHTTCCHHH--HHHEEEEEEECSSCSBS-SSCHHHHHHHHTTCCSSCEEEEEESGGGHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHhCC--cccCCEEEEEeccCCCc-CccHHHHHHHHcCCCCCceEeehhhhhhHHHHHHHHHHH
Confidence 578999999999999999997 99999999999887765 677899999999997558999999999999999999999
Q ss_pred HHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Q 012506 151 AIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATA 230 (462)
Q Consensus 151 ~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~ 230 (462)
+|++|.++.|||+|+|.++...
T Consensus 129 ~i~sg~~~~vLVvg~e~~s~~~---------------------------------------------------------- 150 (388)
T 3v4n_A 129 HVALHPDKKVLVVAADIAKYGL---------------------------------------------------------- 150 (388)
T ss_dssp HHHHCTTCEEEEEEEEEECCCT----------------------------------------------------------
T ss_pred HHhcCCCCEEEEEEehhhcccC----------------------------------------------------------
Confidence 9999999999999999986510
Q ss_pred cCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHH
Q 012506 231 AGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 310 (462)
Q Consensus 231 ~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~ 310 (462)
++. | ++ ..+|||+|+||....
T Consensus 151 ----------------~~~-----------~---------------~~--------------lfGDGA~A~ll~~~~--- 171 (388)
T 3v4n_A 151 ----------------NSG-----------G---------------EP--------------TQGAGAVAMLVSSEP--- 171 (388)
T ss_dssp ----------------TCT-----------T---------------GG--------------GCEEEEEEEEEEESC---
T ss_pred ----------------CCC-----------C---------------CC--------------ccccceeEEEeecCC---
Confidence 000 0 01 158999999998742
Q ss_pred hcCCCceEEE-EEEEEec-----cCCCCCC----c----------cHHHHHHHHHHHcCCCCCCccEEEecCCCHHHH--
Q 012506 311 RKGLPILGVF-RTFAAVG-----VDPAIMG----V----------GPAVAIPAAVKSAGLQLDDIDLFEINEAFASQF-- 368 (462)
Q Consensus 311 ~~g~~~~~~i-~g~~~~~-----~~p~~~~----~----------~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~-- 368 (462)
.++... ...+... ..|.... . ....+++++|+++|++++|||+|-+|++|..+.
T Consensus 172 ----~il~~~~~~~~~~~~~~df~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~g~~~~did~~v~Hqp~~k~~~k 247 (388)
T 3v4n_A 172 ----RILALKEDNVMLTQDIYDFWRPTGHPYPMVDGPLSNETYIQSFAQVWDEHKKRTGLDFADYDALAFHIPYTKMGKK 247 (388)
T ss_dssp ----SSEEECSCCEEEECCCCSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHCCCGGGCSEEEECCSSHHHHHH
T ss_pred ----CceEEeccccccchhccccccCCCCCCceeccHhHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEeCCCcchHHHH
Confidence 122110 0011110 1121100 0 123578889999999999999999999886542
Q ss_pred ----------HHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHH-HHhcCCCCcEEEEEeecccceeEEE-EE
Q 012506 369 ----------VYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHE-MKRRGRDCRFGVISMCIGTGMGAAA-VF 436 (462)
Q Consensus 369 ----------~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~q-L~~~~~~~~~gl~~~~~G~G~g~A~-v~ 436 (462)
....+.||++.+++..+ .--+||...++-...+.+++.+ -+-+.| .++.+.+ .|.|..+.+ .+
T Consensus 248 a~~ril~~~~~~~~~~l~~~~e~~~~~--~~~~GN~~sASi~l~L~~~l~~~g~~~~G-d~ill~s--~GsG~~ae~~~~ 322 (388)
T 3v4n_A 248 ALLAKISDQTEAEQERILARYEESIIY--SRRVGNLYTGSLYLGLISLLENATTLTAG-NQIGLFS--YGSGAVAEFFTG 322 (388)
T ss_dssp HHHHHSTTSCHHHHHHHHHHHHHHTTT--GGGTCCCGGGHHHHHHHHHHHHCSSCCTT-CEEEEEE--EETTTEEEEEEE
T ss_pred HHHHHHhcccHHHHHHhCCCHHHHhhH--HHhcCchHHHHHHHHHHHHHHhcCcCCCC-CEEEEEE--ecCcceeEEEEE
Confidence 23456777776654433 2348999999977777777665 111223 1444444 566666543 33
Q ss_pred Eeccccc
Q 012506 437 ERGDCAD 443 (462)
Q Consensus 437 ~~~~~~~ 443 (462)
.-.+.+.
T Consensus 323 ~v~~~~~ 329 (388)
T 3v4n_A 323 ELVAGYQ 329 (388)
T ss_dssp EECTTGG
T ss_pred EEccCHH
Confidence 3334443
|
| >2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.8e-16 Score=166.62 Aligned_cols=112 Identities=13% Similarity=0.086 Sum_probs=94.7
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHH---HcCCC
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAF---YAGFP 126 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~---~~Glp 126 (462)
...++.+.+.+.+... ..+.+..+|+.+|+++||+++|+++++||.|++++.++... .+..+..++. .+|++
T Consensus 52 ~~~~~~~~Gi~~r~~~----~~~e~~~~La~~Aa~~aL~~agi~~~dId~li~~T~t~~~~-~ps~a~~v~~~L~~lG~~ 126 (478)
T 2p8u_A 52 AGKYTIGLGQAKMGFC----TDREDINSLCMTVVQNLMERNNLSYDCIGRLEVGTETIIDK-SKSVKTNLMQLFEESGNT 126 (478)
T ss_dssp TTCCCCCCCCCEEECC----CTTCCHHHHHHHHHHHHHHHTTCCGGGEEEEEEECSCCSCS-SSCHHHHHGGGTTTTTCC
T ss_pred hhHhecccCceEEEeC----CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCccc-CccHHHHHHHHHhhcCCC
Confidence 3455677777766542 24778999999999999999999999999999999877654 5667788884 45554
Q ss_pred CCcceEEecCCCchHHHHHHHHHHHHHccC--CCEEEEEeecC
Q 012506 127 ETVPVRTVNRQCSSGLQAVADVAAAIKAGF--YDIGIGAGLES 167 (462)
Q Consensus 127 ~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~--~d~vLv~G~E~ 167 (462)
.+++++++.+|++|+.||..|.+.|++|. ++.|||+|+|.
T Consensus 127 -~~~~~dv~~aC~gg~~AL~~A~~~i~sg~~~~~~aLVV~~Ei 168 (478)
T 2p8u_A 127 -DIEGIDTTNACYGGTAAVFNAVNWIESSSWDGRYALVVAGDI 168 (478)
T ss_dssp -CCBCCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEE
T ss_pred -CceEEEEcchhHHHHHHHHHHHHHHHcCCccCCEEEEEEeee
Confidence 68999999999999999999999999999 99999999995
|
| >2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.48 E-value=9.3e-14 Score=145.44 Aligned_cols=95 Identities=13% Similarity=0.095 Sum_probs=82.8
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCC--CCcceEEecCCCchHHHHHHHH
Q 012506 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFP--ETVPVRTVNRQCSSGLQAVADV 148 (462)
Q Consensus 71 ~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp--~~~p~~~v~~~CsSgl~Ai~~A 148 (462)
.+++..+|+++|+++||+++|++|++||.|++++.+++.. .+..+..++..+|++ ..+.+++++.+|+++.+|+..|
T Consensus 50 ~~E~~~~ma~~Aa~~al~~a~i~~~~Id~ii~aT~t~~~~-~ps~a~~v~~~l~~~g~~~~~a~D~~~aC~g~~~al~~A 128 (460)
T 2wya_A 50 VQEDINSLCLTVVQRLMERIQLPWDSVGRLEVGTETIIDK-SKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNA 128 (460)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTCCGGGEEEEEEECSCCSCS-SSCHHHHHGGGTGGGTCCCCBCCEEESGGGHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CCchHHHHHHHHhccCCCCeeEechhhhhhhHHHHHHHH
Confidence 5789999999999999999999999999999999988765 677888888888652 3578899999999999999999
Q ss_pred HHHHHccCCCEEEEEeec
Q 012506 149 AAAIKAGFYDIGIGAGLE 166 (462)
Q Consensus 149 a~~I~sG~~d~vLv~G~E 166 (462)
.+.|++|.++.++++.++
T Consensus 129 ~~~i~~g~~~~~lvvv~~ 146 (460)
T 2wya_A 129 ANWMESSSWDGRYAMVVC 146 (460)
T ss_dssp HHHHTSTTCCSCEEEEEE
T ss_pred HHHHHhccccceEEEEEe
Confidence 999999998766555443
|
| >4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} | Back alignment and structure |
|---|
Probab=92.48 E-value=0.63 Score=45.81 Aligned_cols=77 Identities=22% Similarity=0.279 Sum_probs=52.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec-----CCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHh
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEIN-----EAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 412 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eih-----dafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~ 412 (462)
..|++++|+++|++++|||++-+. ..+.....+..++||+.+.+ ...+ -.||+|...-.....++-+
T Consensus 67 ~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~v~~~LGl~~~~------a~di--~~~C~g~~~aL~~A~~~i~ 138 (350)
T 4ewp_A 67 VGAAREALERAGLQGSDLDAVIVSTVTFPHATPSAAALVAHEIGATPAP------AYDV--SAACAGYCYGVAQADALVR 138 (350)
T ss_dssp HHHHHHHHHHTTCCGGGCSEEEEECSCCSCSSSCHHHHHHHHTTCTTSC------EEEE--ECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCCchHHHHHHHhCCCCce------EEEe--ecchhhHHHHHHHhhhhhh
Confidence 579999999999999999988754 23455677788999996432 1122 2478877776666666665
Q ss_pred cCCCCcEEEEE
Q 012506 413 RGRDCRFGVIS 423 (462)
Q Consensus 413 ~~~~~~~gl~~ 423 (462)
.+. .+++|+.
T Consensus 139 ~g~-~~~~Lvv 148 (350)
T 4ewp_A 139 SGT-ARHVLVV 148 (350)
T ss_dssp TTS-CSEEEEE
T ss_pred CCC-ccceeEe
Confidence 543 2566654
|
| >3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A | Back alignment and structure |
|---|
Probab=91.32 E-value=0.43 Score=47.26 Aligned_cols=88 Identities=16% Similarity=0.154 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcc--------------eEEecCCCc-hHH
Q 012506 78 LLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP--------------VRTVNRQCS-SGL 142 (462)
Q Consensus 78 L~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p--------------~~~v~~~Cs-Sgl 142 (462)
.+.+++++.|+++|++++|+|.|+-|-...- +..+...+....|+|...- ++.-..+|+ |..
T Consensus 208 aA~~ti~~~l~d~g~~~~d~D~ivtgdL~q~---g~~il~~l~~~~g~~~~~~~~dcg~~iy~~~~~~~~ggsg~~csa~ 284 (347)
T 3lma_A 208 AAADTIKQHLEDLGRTPDDYDLILTGDLSGV---GSPILKDLLKEEGINVGTKHNDCGLMIYTPDQQVFAGGSGCACSAV 284 (347)
T ss_dssp HHHHHHHHHHHHHTCCGGGCSEEEEESCHHH---HHHHHHHHHHHTTCCCGGGEEEGGGTSSCC---------CCCCHHH
T ss_pred HHHHHHHHHHHHhCCCHHHcCEEecCChHHH---HHHHHHHHHHHcCCChhHCccccceEEecCCCcccCCCCccccHHH
Confidence 4556678999999999999999997532111 3445667777888864221 222233454 455
Q ss_pred HHHHHHHHHHHccCCCEEEEEeecCC
Q 012506 143 QAVADVAAAIKAGFYDIGIGAGLESM 168 (462)
Q Consensus 143 ~Ai~~Aa~~I~sG~~d~vLv~G~E~m 168 (462)
.........++.|+++.+|++++-..
T Consensus 285 v~~~~~~~~~~~g~~~ril~~~tGal 310 (347)
T 3lma_A 285 VTFAHIFKEIEAGRLNRVLVVATGAL 310 (347)
T ss_dssp HHHHTHHHHHHTTSCSEEEEEEEEEC
T ss_pred HHHHHHHHHHhcCcccEEEEEecccc
Confidence 56677888999999999999998663
|
| >3euo_A Type III pentaketide synthase; alpha helix, acyltransferase, transferase; 1.75A {Neurospora crassa} PDB: 3eut_A* 3euq_A* | Back alignment and structure |
|---|
Probab=88.53 E-value=0.97 Score=45.27 Aligned_cols=44 Identities=20% Similarity=0.121 Sum_probs=34.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----CHHHHHHHHHHcCCCCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA----FASQFVYCRNKLGLDPEK 381 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda----fa~~~~~~~e~LGl~~~~ 381 (462)
..|++++|+++|++++|||++-+--+ +.....+..+.||+.+..
T Consensus 86 ~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~p~~a~~v~~~LGl~~~~ 133 (379)
T 3euo_A 86 VEASRKAMAEARLVPAQITHMVSTTCTDSANPGYDHYVAKELGLSDRL 133 (379)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSSCCCSSCHHHHHHHHHTCCTTC
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHcCCCCCe
Confidence 47899999999999999999876433 345567788899997653
|
| >3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=87.08 E-value=1.3 Score=45.77 Aligned_cols=43 Identities=21% Similarity=0.140 Sum_probs=34.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----CHHHHHHHHHHcCCCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA----FASQFVYCRNKLGLDPE 380 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda----fa~~~~~~~e~LGl~~~ 380 (462)
..|++++|+++|++++|||++-+--+ +.....+..+.||+.+.
T Consensus 115 ~~Aa~~AL~~agi~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~ 161 (465)
T 3e1h_A 115 VEASRKAMAEARLVPAQITHMVSTTCTDSANPGYDHYVAKELGLSDR 161 (465)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSSCCCSSCHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHhCCCCC
Confidence 46899999999999999999876533 34556778889999764
|
| >3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A | Back alignment and structure |
|---|
Probab=85.71 E-value=1.4 Score=43.42 Aligned_cols=82 Identities=16% Similarity=0.059 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEE----ecCCCchHHHHHHHHHHH--
Q 012506 78 LLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRT----VNRQCSSGLQAVADVAAA-- 151 (462)
Q Consensus 78 L~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~----v~~~CsSgl~Ai~~Aa~~-- 151 (462)
...++++++|+++|++++|||.++.=+. +...-..++..+|+|...-..+ -|..++|-..+|..+...
T Consensus 247 ~~~~~i~~~l~~~gl~~~did~~v~Hq~------~~~i~~~~~~~lgl~~ek~~~~l~~~GNt~sasi~~~L~~~~~~g~ 320 (345)
T 3s21_A 247 LAQKTFVAAKQVLGWAVEELDQFVIHQV------SRPHTAAFVKSFGIDPAKVMTIFGEHGNIGPASVPIVLSKLKELGR 320 (345)
T ss_dssp HHHHHHHHHHHHHCCCGGGCSEEEECCS------CHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEeCCC------CHHHHHHHHHHcCcCHHHceeeHhhcCchHHHHHHHHHHHHHHcCC
Confidence 4456778999999999999999886221 2334566778899985432222 255666666666665444
Q ss_pred HHccCCCEEEEEeecC
Q 012506 152 IKAGFYDIGIGAGLES 167 (462)
Q Consensus 152 I~sG~~d~vLv~G~E~ 167 (462)
++.| |.++.+|+-.
T Consensus 321 ~~~G--d~vll~~~G~ 334 (345)
T 3s21_A 321 LKKG--DRIALLGIGS 334 (345)
T ss_dssp CCTT--CEEEEEEEET
T ss_pred CCCC--CEEEEEEECh
Confidence 3344 7888887755
|
| >3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* | Back alignment and structure |
|---|
Probab=84.83 E-value=1.2 Score=44.27 Aligned_cols=83 Identities=12% Similarity=0.073 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEE----ecCCCchHHHHHHHHHHHH
Q 012506 77 DLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRT----VNRQCSSGLQAVADVAAAI 152 (462)
Q Consensus 77 eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~----v~~~CsSgl~Ai~~Aa~~I 152 (462)
+.+.++++++|+++|++++|||.++.=+. +...-..++..+|+|...-..+ -|..++|-..+|..+...+
T Consensus 254 ~~~~~~i~~~L~~~gl~~~did~~v~Hq~------n~~i~~~~~~~lgl~~ek~~~~l~~~GNt~sAsi~l~L~~~~~~l 327 (359)
T 3h78_A 254 QTLVRIAGEMLAAHELTLDDIDHVICHQP------NLRILDAVQEQLGIPQHKFAVTVDRLGNMASASTPVTLAMFWPDI 327 (359)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCSEEEECCS------CHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHHGGGS
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCC------CHHHHHHHHHHhCcCHHHhhhhhhcccchHHHHHHHHHHHHHHhC
Confidence 34567889999999999999998876322 2334567778899985433222 3666777777777776665
Q ss_pred HccCCCEEEEEeecC
Q 012506 153 KAGFYDIGIGAGLES 167 (462)
Q Consensus 153 ~sG~~d~vLv~G~E~ 167 (462)
+.| |.+|.+|+-.
T Consensus 328 ~~G--d~vll~~fG~ 340 (359)
T 3h78_A 328 QPG--QRVLVLTYGS 340 (359)
T ss_dssp CTT--CEEEEEEEET
T ss_pred CCC--CEEEEEEEch
Confidence 555 6777777543
|
| >3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A | Back alignment and structure |
|---|
Probab=83.65 E-value=2.6 Score=41.87 Aligned_cols=82 Identities=10% Similarity=-0.054 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEe----cCCCchHHHHHHHHHHHH
Q 012506 77 DLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTV----NRQCSSGLQAVADVAAAI 152 (462)
Q Consensus 77 eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v----~~~CsSgl~Ai~~Aa~~I 152 (462)
+...++++++|+++|++++|||.++.=+. +...-..++..+|+|...-..++ |..++|-..+|. .++
T Consensus 266 ~~~~~~i~~~L~~~gl~~~did~~v~Hq~------n~~i~~~~~~~Lgl~~ek~~~~l~~~GNtssAsipl~L~---~~~ 336 (365)
T 3gwa_A 266 AEVPRAADRLLALAGEPRENIDCFVLHQA------NRFMLDALRKKMKIPEHKFPVLMEHCGNTVSSTLPLALE---TMR 336 (365)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEECCC------CHHHHHHHHHHHTCCGGGSCCCCTTTCBCGGGHHHHHHH---HHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEcCC------CHHHHHHHHHHhCCCHHHHHHHHhcccchHHHHHHHHHH---HHH
Confidence 44567789999999999999999876321 23445677888999864433333 333444444444 345
Q ss_pred HccCC---CEEEEEeecC
Q 012506 153 KAGFY---DIGIGAGLES 167 (462)
Q Consensus 153 ~sG~~---d~vLv~G~E~ 167 (462)
+.|.. |.+|.+|+-.
T Consensus 337 ~~g~~~~Gd~vll~~fG~ 354 (365)
T 3gwa_A 337 ANGTLARGMRLMLLGFGV 354 (365)
T ss_dssp HTTCCCTTCEEEEEEEET
T ss_pred HcCCCCCCCEEEEEEEeh
Confidence 66653 6888877643
|
| >1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A | Back alignment and structure |
|---|
Probab=83.52 E-value=2.2 Score=40.94 Aligned_cols=81 Identities=15% Similarity=0.141 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEE----ecCCCchHHHHHHHHHHHHH
Q 012506 78 LLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRT----VNRQCSSGLQAVADVAAAIK 153 (462)
Q Consensus 78 L~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~----v~~~CsSgl~Ai~~Aa~~I~ 153 (462)
-..++++++|+++|++++|||.++.-.. +......+...+|++......+ -|..++|+..+|..+ ++
T Consensus 213 ~~~~~i~~al~~agl~~~did~~~~H~~------~~~~~d~~~~~lg~~~~~~~~~~~~~Gh~~~as~~~~L~~~---~~ 283 (313)
T 1zow_A 213 IMGDASTRVVEKANLTSDDIDLFIPHQA------NIRIMESARERLGISKDKMSVSVNKYGNTSAASIPLSIDQE---LK 283 (313)
T ss_dssp HHHHHHHHHHHHTTCCGGGCSEEEECCS------CHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---HH
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEcCC------CHHHHHHHHHHhCCCHHHHHHhHhhhCchHHHHHHHHHHHH---HH
Confidence 5567889999999999999998876221 2233445667789864322222 255666777666554 55
Q ss_pred ccCC---CEEEEEeecC
Q 012506 154 AGFY---DIGIGAGLES 167 (462)
Q Consensus 154 sG~~---d~vLv~G~E~ 167 (462)
.|+. |.+|+.|+-.
T Consensus 284 ~~~~~~g~~vl~~~~G~ 300 (313)
T 1zow_A 284 NGKLKDDDTIVLVGFGG 300 (313)
T ss_dssp TTCCCTTCEEEEEEEET
T ss_pred cCCCCCCCEEEEEEEch
Confidence 5654 7888887654
|
| >2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=82.79 E-value=2.2 Score=41.51 Aligned_cols=82 Identities=15% Similarity=0.143 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEE----ecCCCchHHHHHHHHHHHH
Q 012506 77 DLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRT----VNRQCSSGLQAVADVAAAI 152 (462)
Q Consensus 77 eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~----v~~~CsSgl~Ai~~Aa~~I 152 (462)
+...++++++|+++|++++|||.++.-.. +......+...+|+|......+ -|..++|...+|..+ +
T Consensus 224 ~~~~~~i~~aL~~agl~~~did~~~~H~~------~~~~~d~~~~~lg~~~~~~~~~~~~~Gnt~sAs~~~~L~~~---~ 294 (331)
T 2x3e_A 224 TQMSDSVRRVLDRVGWQASDLHHLVPHQA------NTRILAAVADQLDLPVERVVSNIAEVGNTVAASIPLALAHG---L 294 (331)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEECCC------CHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---H
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEcCC------CHHHHHHHHHHcCCCHHHHhhhHhhhCcHHHHHHHHHHHHH---H
Confidence 45677899999999999999998877221 2233445777889974322222 255566666666544 5
Q ss_pred HccCC---CEEEEEeecC
Q 012506 153 KAGFY---DIGIGAGLES 167 (462)
Q Consensus 153 ~sG~~---d~vLv~G~E~ 167 (462)
+.|+. |.+|..|+-.
T Consensus 295 ~~~~~~~G~~vll~~~G~ 312 (331)
T 2x3e_A 295 RQGILRDGGNMVLTGFGA 312 (331)
T ss_dssp HTTCSCTTCEEEEEEEET
T ss_pred HhCCCCCCCEEEEEEEeH
Confidence 55543 6888887765
|
| >3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=82.51 E-value=2.9 Score=42.34 Aligned_cols=42 Identities=26% Similarity=0.301 Sum_probs=33.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----CHHHHHHHHHHcCCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA----FASQFVYCRNKLGLDP 379 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda----fa~~~~~~~e~LGl~~ 379 (462)
..|++++|+++|++++|||.+-+--+ +.....+..+.||+.+
T Consensus 142 ~~Aa~~AL~~agi~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~ 187 (413)
T 3v7i_A 142 ERAARGALQIAGLDVADVDCLITSNSTTPALPGLDVALANRLPLRG 187 (413)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECCSSCCSSCHHHHHHHHTTCCT
T ss_pred HHHHHHHHHHhCcCHHHCCEEEEEccCCCCcCHHHHHHHHHhCCCC
Confidence 47899999999999999999876432 3345677788999976
|
| >3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A | Back alignment and structure |
|---|
Probab=82.49 E-value=2.5 Score=42.41 Aligned_cols=43 Identities=19% Similarity=0.098 Sum_probs=33.8
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----CHHHHHHHHHHcCCCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA----FASQFVYCRNKLGLDPE 380 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda----fa~~~~~~~e~LGl~~~ 380 (462)
..|++++|+++|++++|||++-+-.+ +.....+..+.||+.+.
T Consensus 107 ~~Aa~~aL~~ag~~~~dId~vi~~t~t~~~~p~~a~~v~~~LGl~~~ 153 (393)
T 3ov2_A 107 KEAAEKAIKEWGRPKSEITHLVFCSISGIDMPGADYRLATLLGLPLT 153 (393)
T ss_dssp HHHHHHHHHHHTSCGGGCCEEEEEESSCCCBSCHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEEeCCCCCCCHHHHHHHHcCCCCC
Confidence 47899999999999999999876432 33456677889999764
|
| >3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* | Back alignment and structure |
|---|
Probab=82.39 E-value=2.2 Score=41.43 Aligned_cols=42 Identities=14% Similarity=0.193 Sum_probs=33.0
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC-----HHHHHHHHHHcCCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAF-----ASQFVYCRNKLGLDP 379 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdaf-----a~~~~~~~e~LGl~~ 379 (462)
..|++++|+++|++++|||.+-+-.+. .....+..+.||+.+
T Consensus 57 ~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~~p~~a~~v~~~lGl~~ 103 (321)
T 3il6_A 57 HQVAKQLLEKSGKQASEIDFILVATVTPDFNMPSVACQVQGAIGATE 103 (321)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeCCCCcCCCcHHHHHHHHcCCCC
Confidence 478999999999999999998774322 345667788899964
|
| >1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A | Back alignment and structure |
|---|
Probab=82.36 E-value=2.6 Score=40.91 Aligned_cols=82 Identities=15% Similarity=0.143 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEE-----ecCCCchHHHHHHHHHHH
Q 012506 77 DLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRT-----VNRQCSSGLQAVADVAAA 151 (462)
Q Consensus 77 eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~-----v~~~CsSgl~Ai~~Aa~~ 151 (462)
+...++++++|+++|++++|||.++.-.. +......+...+|+|.....+. -|..++|...++..+
T Consensus 232 ~~~~~~i~~al~~agl~~~dId~~~~H~~------~~~~~~~~~~~lg~~~~~~~~~~~~~~Gnt~sAs~~~~L~~~--- 302 (335)
T 1u6e_A 232 FKMGDVGRRAMDAAGVRPDQIDVFVPHQA------NSRINELLVKNLQLRPDAVVANDIEHTGNTSAASIPLAMAEL--- 302 (335)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEECCS------CHHHHHHHHHHHTCCTTCEECCTHHHHCBCGGGHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCC------CHHHHHHHHHHcCCCchhhhhhhhhhhCcHHHHHHHHHHHHH---
Confidence 35567899999999999999998876321 2333445677899975422221 145555655555544
Q ss_pred HHccC---CCEEEEEeecC
Q 012506 152 IKAGF---YDIGIGAGLES 167 (462)
Q Consensus 152 I~sG~---~d~vLv~G~E~ 167 (462)
++.|+ -|.+|+.|+-.
T Consensus 303 ~~~~~~~~g~~~l~~~~G~ 321 (335)
T 1u6e_A 303 LTTGAAKPGDLALLIGYGA 321 (335)
T ss_dssp HHHTSSCTTCEEEEEEEET
T ss_pred HHcCCCCCCCEEEEEEEeh
Confidence 34443 37888877643
|
| >1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=82.00 E-value=2.8 Score=40.91 Aligned_cols=82 Identities=16% Similarity=0.181 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceE-E----ecCCCchHHHHHHHHHHH
Q 012506 77 DLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVR-T----VNRQCSSGLQAVADVAAA 151 (462)
Q Consensus 77 eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~-~----v~~~CsSgl~Ai~~Aa~~ 151 (462)
+...++++++|+++|++++|||.++.-.. +......+...+|+|...... + -|..++|...+|..+
T Consensus 231 ~~~~~~i~~aL~~agl~~~did~v~~H~~------~~~~~d~i~~~lg~~~~~~~~~~~~~~Gn~~sAs~~~~L~~~--- 301 (339)
T 1mzj_A 231 ADVVPAAREALEVAGLTVGDLVAFVPHQA------NLRIIDVLVDRLGVPEHVVVSRDAEDTGNTSSASVALALDRL--- 301 (339)
T ss_dssp HHHHHHHHHHHHTTTCCGGGCSEEEECCS------CHHHHHHHHHHHTCCTTSEECCTHHHHCBCTTHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCC------CHHHHHHHHHHhCCCccceeeehhhhcCchHHHHHHHHHHHH---
Confidence 45677899999999999999998876321 223344577789997541222 1 255566666666544
Q ss_pred HHccCC---CEEEEEeecC
Q 012506 152 IKAGFY---DIGIGAGLES 167 (462)
Q Consensus 152 I~sG~~---d~vLv~G~E~ 167 (462)
++.|.. |.+|+.|+-.
T Consensus 302 ~~~g~~~~G~~vll~~~G~ 320 (339)
T 1mzj_A 302 VRSGAVPGGGPALMIGFGA 320 (339)
T ss_dssp HHHTSSCTTCEEEEEEEET
T ss_pred HHcCCCCCCCEEEEEEEch
Confidence 455543 6888887754
|
| >3awk_A Chalcone synthase-like polyketide synthase; type III polyketide synthase, transferase; 2.00A {Huperzia serrata} PDB: 3awj_A | Back alignment and structure |
|---|
Probab=81.59 E-value=2.6 Score=42.38 Aligned_cols=43 Identities=21% Similarity=0.193 Sum_probs=33.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----CHHHHHHHHHHcCCCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA----FASQFVYCRNKLGLDPE 380 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda----fa~~~~~~~e~LGl~~~ 380 (462)
..|++++|+++|++++|||.+-+-.+ +.....+..+.||+.+.
T Consensus 120 ~~Aa~~aL~~agl~~~~Id~vi~~t~~~~~~p~~a~~v~~~lGl~~~ 166 (402)
T 3awk_A 120 KEAAISAIKQWGQPKSKITHLVFATTSGVDMPGADFQLAKLLGLRPT 166 (402)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEECSCCCSSCHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEEeCCCcCChHHHHHHHHcCCCCc
Confidence 47899999999999999998775432 34456677889999653
|
| >1i88_A CHS2, chalcone synthase 2; polyketide synthase, transferase; 1.45A {Medicago sativa} SCOP: c.95.1.2 c.95.1.2 PDB: 1i89_A 1i86_A 1i8b_A 1bi5_A 1cml_A* 1d6f_A* 1chw_A* 1cgz_A* 1cgk_A* 1bq6_A* 1jwx_A 1d6i_A 1d6h_A* 1u0v_A 1u0w_A* 1z1e_A* 1z1f_A* | Back alignment and structure |
|---|
Probab=81.42 E-value=2.7 Score=41.94 Aligned_cols=43 Identities=21% Similarity=0.159 Sum_probs=33.6
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----CHHHHHHHHHHcCCCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA----FASQFVYCRNKLGLDPE 380 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda----fa~~~~~~~e~LGl~~~ 380 (462)
..|++++|+++|++++|||++-+-.. +.....+..+.||+...
T Consensus 107 ~~Aa~~aL~~agl~~~~Id~li~~t~~~~~~p~~a~~v~~~lGl~~~ 153 (389)
T 1i88_A 107 KEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPY 153 (389)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEECCCCCCchHHHHHHHHcCcCCC
Confidence 47889999999999999999876432 34456677889999653
|
| >3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=80.87 E-value=2.4 Score=42.67 Aligned_cols=93 Identities=20% Similarity=0.178 Sum_probs=56.0
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC-----CCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHh
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINE-----AFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 412 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihd-----afa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~ 412 (462)
..|++++|+++|++++|||.+-+-. .+........+.||+.. .++---.+|+|....+....++-.
T Consensus 122 ~~Aa~~AL~~agi~~~dId~vi~~t~t~~~~~p~~a~~v~~~LGl~~---------~~~dv~~aC~g~~~aL~~A~~~i~ 192 (392)
T 3led_A 122 VTAAEQAIERWGKPRERIGAVLCACSNMQRAYPAMAIEVQNALGLGG---------FAFDMNVACSSATFGLKTAADFVG 192 (392)
T ss_dssp HHHHHHHHHHHCSCGGGEEEEEEESSCCSCSBSCHHHHHHHHTTCCS---------EEEEEECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCCCccHHHHHHHHHhCCCC---------eEEEECCccHHHHHHHHHHHHHHH
Confidence 4789999999999999999987632 22345566778999931 122223466665554444444443
Q ss_pred cCCCCcEEEEEe---------------ecccceeE-EEEEEecc
Q 012506 413 RGRDCRFGVISM---------------CIGTGMGA-AAVFERGD 440 (462)
Q Consensus 413 ~~~~~~~gl~~~---------------~~G~G~g~-A~v~~~~~ 440 (462)
.+ ..++.|+.. |.-.|-|+ |+||++.+
T Consensus 193 ~g-~~~~vLvvg~E~~S~~~d~~dr~t~~lFGDGA~A~vl~~~~ 235 (392)
T 3led_A 193 GG-SVDAVLMVNPEICSGHLNFRDRDSHFIFGDVATAAIVERAD 235 (392)
T ss_dssp TT-SCSEEEEEEEEEGGGGCCTTCTTTTTTBCEEEEEEEEEEGG
T ss_pred CC-CCCEEEEEeehhcCCcCCcCcccCCcccccccEEEEEEecC
Confidence 32 235555532 22345554 66777654
|
| >3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A | Back alignment and structure |
|---|
Probab=80.84 E-value=2.8 Score=41.84 Aligned_cols=43 Identities=21% Similarity=0.130 Sum_probs=33.2
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----CHHHHHHHHHHcCCCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA----FASQFVYCRNKLGLDPE 380 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda----fa~~~~~~~e~LGl~~~ 380 (462)
..|++++|+++|++++|||++-+-.+ +.....+..+.||+...
T Consensus 103 ~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~p~~a~~v~~~lGl~~~ 149 (387)
T 3a5r_A 103 KEAALKAIKEWGQPKSKITHLIVCCLAGVDMPGADYQLTKLLDLDPS 149 (387)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEESSCCEESCHHHHHHHHTTCCTT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcHHHHHHHHcCcCCC
Confidence 47899999999999999998876432 33445677889999653
|
| >2p0u_A Stilbenecarboxylate synthase 2; polyketide synthase, PKS type transferase; 1.90A {Marchantia polymorpha} | Back alignment and structure |
|---|
Probab=80.74 E-value=2.9 Score=42.28 Aligned_cols=43 Identities=21% Similarity=0.221 Sum_probs=33.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----CHHHHHHHHHHcCCCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA----FASQFVYCRNKLGLDPE 380 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda----fa~~~~~~~e~LGl~~~ 380 (462)
..|++++|+++|++++|||++-+-.+ +.....+..+.||+...
T Consensus 125 ~~Aa~~aL~~agl~~~dId~li~~t~~~~~~p~~a~~v~~~LGl~~~ 171 (413)
T 2p0u_A 125 KEASMNAIKEWGRPKSEITHIVMATTSGVNMPGAELATAKLLGLRPN 171 (413)
T ss_dssp HHHHHHHHHHHTSCGGGCCEEEEEESSCCCBSCHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHhCcCHHHCCEEEEEecCCcccCcHHHHHHHHhCCCCC
Confidence 47899999999999999999876433 34456677889999653
|
| >1ee0_A 2-pyrone synthase; polyketide synthase, thiolase fold, transferase; HET: CAA; 2.05A {Gerbera hybrid cultivar} SCOP: c.95.1.2 c.95.1.2 PDB: 1qlv_A | Back alignment and structure |
|---|
Probab=80.71 E-value=2.8 Score=42.13 Aligned_cols=43 Identities=21% Similarity=0.180 Sum_probs=33.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----CHHHHHHHHHHcCCCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA----FASQFVYCRNKLGLDPE 380 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda----fa~~~~~~~e~LGl~~~ 380 (462)
..|++++|+++|++++|||++-+-.. +.....+..+.||+...
T Consensus 112 ~~Aa~~aL~~agl~~~~Id~vi~~t~~~~~~p~~a~~v~~~lGl~~~ 158 (402)
T 1ee0_A 112 KEAAVKAIDEWGLPKSKITHLIFCTTAGVDMPGADYQLVKLLGLSPS 158 (402)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEECSSCCEESCHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCCCChHHHHHHHHcCcCCC
Confidence 47899999999999999998876433 33446677888999653
|
| >1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* | Back alignment and structure |
|---|
Probab=80.41 E-value=3.6 Score=39.52 Aligned_cols=80 Identities=16% Similarity=0.143 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEE-----ecCCCchHHHHHHHHHHHH
Q 012506 78 LLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRT-----VNRQCSSGLQAVADVAAAI 152 (462)
Q Consensus 78 L~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~-----v~~~CsSgl~Ai~~Aa~~I 152 (462)
...++++++|+++|++++|||.++.-.. +......+...+|+|.. .... -|..++|...+|..+ +
T Consensus 219 ~~~~~i~~aL~~agl~~~did~v~~H~~------~~~~~d~i~~~lg~~~~-~~~~~~~~~Gn~~~As~~~~L~~~---~ 288 (317)
T 1hnj_A 219 ELAHIVDETLAANNLDRSQLDWLVPHQA------NLRIISATAKKLGMSMD-NVVVTLDRHGNTSAASVPCALDEA---V 288 (317)
T ss_dssp HHHHHHHHHHHHTTCCGGGCCEEEECCS------CHHHHHHHHHHTTCCGG-GBCCCHHHHCBCGGGHHHHHHHHH---H
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEcCC------CHHHHHHHHHHcCCCHH-HhHhhHhhhCcHHHHHHHHHHHHH---H
Confidence 4567899999999999999998876321 22334467778999643 2221 255667777666554 5
Q ss_pred HccCC---CEEEEEeecC
Q 012506 153 KAGFY---DIGIGAGLES 167 (462)
Q Consensus 153 ~sG~~---d~vLv~G~E~ 167 (462)
+.|.. |.+|+.|+-.
T Consensus 289 ~~~~~~~G~~vll~~~G~ 306 (317)
T 1hnj_A 289 RDGRIKPGQLVLLEAFGG 306 (317)
T ss_dssp HTTCSCTTCEEEEEEEET
T ss_pred HhCCCCCCCEEEEEEEch
Confidence 55544 7888887654
|
| >3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A | Back alignment and structure |
|---|
Probab=80.34 E-value=3 Score=41.75 Aligned_cols=78 Identities=18% Similarity=0.136 Sum_probs=47.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----CHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhc
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA----FASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 413 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda----fa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~ 413 (462)
..|++++|+++|++++|||++-+-.+ +.....+..+.||+.+..... +-.-.+|+|....+....++-..
T Consensus 101 ~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~p~~a~~v~~~LGl~~~~~~~------~~~~~~C~~~~~al~~A~~~i~s 174 (387)
T 3oit_A 101 AEAAKKAIAEWGRPAADITHLVVTTNSGAHVPGVDFRLVPLLGLRPSVRRT------MLHLNGCFAGCAALRLAKDLAEN 174 (387)
T ss_dssp HHHHHHHHHHHTSCGGGCCEEEEEESSCCEESCHHHHHHHHHTCCTTCEEE------EEECCGGGHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeeCCCCcccHHHHHHHHhCCCCCccee------eEECchhHHHHHHHHHHHHHHhc
Confidence 47899999999999999999876433 234456777899997642100 11123566555544444444433
Q ss_pred CCCCcEEEE
Q 012506 414 GRDCRFGVI 422 (462)
Q Consensus 414 ~~~~~~gl~ 422 (462)
+. .++.|+
T Consensus 175 g~-~~~vLv 182 (387)
T 3oit_A 175 SR-GARVLV 182 (387)
T ss_dssp ST-TCEEEE
T ss_pred CC-CCEEEE
Confidence 32 255554
|
| >1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=80.33 E-value=4.2 Score=40.46 Aligned_cols=76 Identities=21% Similarity=0.288 Sum_probs=47.3
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----CHHHHHHHHHHcCCCCC--CCCCCCCccccCCccchH-HHHHHHHHHHHH
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA----FASQFVYCRNKLGLDPE--KINVNGGALAIGHPLGTT-GARCVATLLHEM 410 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda----fa~~~~~~~e~LGl~~~--~vn~~GG~~a~Ghp~gat-G~~~~~~~~~qL 410 (462)
..|++++|+++|++++|||.+-.-.. +.....+..+.||+... .+.+ .. .+|+ |+..+..+...+
T Consensus 89 ~~Aa~~aL~~agl~~~~id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~v-------~~-~aCss~~~Al~~A~~~i 160 (382)
T 1u0m_A 89 PAVIQRALDDAELLATDIDVIIYVSCTGFMMPSLTAWLINEMGFDSTTRQIPI-------AQ-LGCAAGGAAINRAHDFC 160 (382)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEEECSSSCCSSCHHHHHHHHTTCCTTCEEEEE-------CS-CGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHCCEEEEEecCCCCCCcHHHHHHHHhCCCCCcceEEc-------cC-CcCHHHHHHHHHHHHHH
Confidence 47889999999999999999876332 33445677788999752 1222 11 2444 444455555556
Q ss_pred HhcCCCCcEEEEE
Q 012506 411 KRRGRDCRFGVIS 423 (462)
Q Consensus 411 ~~~~~~~~~gl~~ 423 (462)
+.... ++.|+.
T Consensus 161 ~~g~~--~~vLv~ 171 (382)
T 1u0m_A 161 TAYPE--ANALIV 171 (382)
T ss_dssp HHSTT--CEEEEE
T ss_pred HcCCC--CEEEEE
Confidence 55432 455543
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=80.24 E-value=4.6 Score=40.35 Aligned_cols=78 Identities=15% Similarity=0.216 Sum_probs=51.0
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC-----HHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHh
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAF-----ASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 412 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdaf-----a~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~ 412 (462)
..|++++|+++|++++|||.+-+-..+ ..........||+++.... ..+ +...++|+..+..+...++.
T Consensus 34 ~~a~~~Al~~agi~~~~Id~v~~g~~~~~~~~~~~a~~~~~~lGl~~~~p~-----~~v-~~~Css~~~al~~A~~~I~~ 107 (395)
T 4e1l_A 34 TIAVKEAISRVGLNLSEIDEVIIGNVLQTGLGQNVARQIAINAGIPNSVPS-----YTV-NKLCGSGLKSVQLAAQSITS 107 (395)
T ss_dssp HHHHHHHHHHTTCCGGGCCEEEEECCCCSSTTCCHHHHHHHHTTCCTTSCE-----EEE-CCGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcchHHHHHHHHcCCCCCceE-----EEc-cccchHHHHHHHHHHHHHhC
Confidence 479999999999999999988764321 2234556678999642111 111 33455666677777777775
Q ss_pred cCCCCcEEEEE
Q 012506 413 RGRDCRFGVIS 423 (462)
Q Consensus 413 ~~~~~~~gl~~ 423 (462)
.. ++..|+.
T Consensus 108 G~--~~~vlv~ 116 (395)
T 4e1l_A 108 GE--NDVVIAG 116 (395)
T ss_dssp TS--CSEEEEE
T ss_pred CC--CCEEEEE
Confidence 43 4777764
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 462 | ||||
| d1m3ka1 | 268 | c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea | 2e-66 | |
| d1ulqa1 | 273 | c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {T | 1e-60 | |
| d1afwa1 | 269 | c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Sacch | 2e-51 | |
| d1wdkc1 | 262 | c.95.1.1 (C:2-263) Fatty oxidation complex beta su | 1e-49 | |
| d1m3ka2 | 124 | c.95.1.1 (A:269-392) Biosynthetic thiolase {Zooglo | 4e-43 | |
| d1afwa2 | 124 | c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Sacc | 1e-42 | |
| d1ulqa2 | 125 | c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase | 5e-37 | |
| d1wdkc2 | 128 | c.95.1.1 (C:264-391) Fatty oxidation complex beta | 4e-35 | |
| d1teda_ | 372 | c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacte | 1e-05 | |
| d1fwxa2 | 459 | b.69.3.1 (A:8-451) Nitrous oxide reductase, N-term | 0.001 |
| >d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Score = 211 bits (539), Expect = 2e-66
Identities = 101/274 (36%), Positives = 147/274 (53%), Gaps = 18/274 (6%)
Query: 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPG 109
+VI +A RTA+ G F +T +L A V+ AV+E+ V EV ++++G VL G
Sbjct: 3 PSIVIASAARTAVGS-FNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAG 61
Query: 110 SQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMT 169
+ + R AA AG P+ +N+ SGL+AVA I G I + G+ESM+
Sbjct: 62 -EGQNPARQAAMKAGVPQEATAWGMNQLAGSGLRAVALGMQQIATGDASIIVAGGMESMS 120
Query: 170 VNPMAWEGSVNPKVKAFEQAQNCL----------LPMGVTSENVAHRFGVTRKEQDQAAV 219
+ P K+ F+ + MG T+ENVA ++ ++R EQD AV
Sbjct: 121 MAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAV 180
Query: 220 DSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPV 279
S KA AA G+FKDEI+P IV + GD +T+ D+ IR ++ +AKL+P
Sbjct: 181 ASQNKAEAAQKDGRFKDEIVP---FIVKGRKGD---ITVDADEYIRHGATLDSMAKLRPA 234
Query: 280 FKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKG 313
F K+GT TAGN+S ++DGA A LLM + A R+G
Sbjct: 235 FDKEGTVTAGNASGLNDGAAAALLMSEAEASRRG 268
|
| >d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Score = 197 bits (501), Expect = 1e-60
Identities = 108/280 (38%), Positives = 148/280 (52%), Gaps = 23/280 (8%)
Query: 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGS 110
+ IV A RT + K G PDDLLA L +++++ V EV D+ G G
Sbjct: 1 EAWIVEAVRTPIGK-HGGALASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGE 59
Query: 111 QRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTV 170
+ RMA AGFP V TVNR C SGL+AVA A AI AG + IG+G+ESM+
Sbjct: 60 DNRNVARMALLLAGFPVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSR 119
Query: 171 NPMAWEGSVNPK----------------VKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQ 214
P A V QA MG T+EN+A +G+ R+EQ
Sbjct: 120 APYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGTESMGETAENLAEMYGIRREEQ 179
Query: 215 DQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELA 274
D+ A+ SH+KA A G+F+DE++PV P ++ + + D+G R +TS+ +LA
Sbjct: 180 DRFALLSHQKAVRAWEEGRFQDEVVPV------PVKRGKEEILVEQDEGPRRDTSLEKLA 233
Query: 275 KLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGL 314
L+PVF++ GT TAGNSS ++DGA AVLL+ A GL
Sbjct: 234 ALRPVFREGGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGL 273
|
| >d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 173 bits (438), Expect = 2e-51
Identities = 111/268 (41%), Positives = 153/268 (57%), Gaps = 18/268 (6%)
Query: 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEK----TNVDPSEVGDIVVGTV 105
+DVVIVAA R+A+ K +G FKD D LL L I + D + + ++ G V
Sbjct: 10 EDVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNV 69
Query: 106 LAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGL 165
L A+E R A +G P + P +NRQCSSGL AV D+A IK G DIG+ G+
Sbjct: 70 L-NVGAGATEHRAACLASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGV 128
Query: 166 ESMTVNPMA---WEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSH 222
ESMT N + +++ +A+ CL+PMG+T+ENVA F ++RK+QD+ A +S+
Sbjct: 129 ESMTNNYKNVNPLGMISSEELQKNREAKKCLIPMGITNENVAANFKISRKDQDEFAANSY 188
Query: 223 RKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK 282
+KA A G F+DEI+P+ D+G RPN + L+ ++P F K
Sbjct: 189 QKAYKAKNEGLFEDEILPI---------KLPDGSICQSDEGPRPNVTAESLSSIRPAFIK 239
Query: 283 D-GTTTAGNSSQVSDGAGAVLLMKRSVA 309
D GTTTAGN+SQVSDG VLL +RSVA
Sbjct: 240 DRGTTTAGNASQVSDGVAGVLLARRSVA 267
|
| >d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Score = 168 bits (425), Expect = 1e-49
Identities = 96/262 (36%), Positives = 138/262 (52%), Gaps = 9/262 (3%)
Query: 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEK-TNVDPSEVGDIVVGTVLAP 108
DVVIV RT + +SK G ++T +D+ A ++ V+E+ + VDP EV D++ G V
Sbjct: 5 RDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQT 64
Query: 109 GSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESM 168
Q + RMA+ P T +TV+R C S + A+ A AI G D+ + G+E M
Sbjct: 65 LEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM 124
Query: 169 TVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAA 228
M V+P A MG+T+E + G++R++QD AV SH+ A A
Sbjct: 125 GHVSMMH--GVDPNPHMSLYAAKASGMMGLTAEMLGKMHGISREQQDAFAVRSHQLAHKA 182
Query: 229 TAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFK-KDGTTT 287
T GKFKDEIIP+ + D+ IRP+T++ LA LKP F K GT T
Sbjct: 183 TVEGKFKDEIIPMQGYDENG-----FLKIFDYDETIRPDTTLESLAALKPAFNPKGGTVT 237
Query: 288 AGNSSQVSDGAGAVLLMKRSVA 309
AG SSQ++DGA +++M A
Sbjct: 238 AGTSSQITDGASCMIVMSAQRA 259
|
| >d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Score = 146 bits (369), Expect = 4e-43
Identities = 64/122 (52%), Positives = 81/122 (66%), Gaps = 2/122 (1%)
Query: 317 LGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLG 376
LG ++A VGVDP +MG GP A A++ AG ++ D+DL E NEAFA+Q LG
Sbjct: 4 LGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLVEANEAFAAQACAVNKDLG 63
Query: 377 LDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVF 436
DP +NVNGGA+AIGHP+G +GAR + TLL EMKRRG R G+ ++CIG GMG A
Sbjct: 64 WDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRRG--ARKGLATLCIGGGMGVAMCI 121
Query: 437 ER 438
E
Sbjct: 122 ES 123
|
| >d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 145 bits (366), Expect = 1e-42
Identities = 76/126 (60%), Positives = 97/126 (76%), Gaps = 4/126 (3%)
Query: 313 GLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCR 372
LP+LG + F VGV P IMGVGPA AIP +++ GLQ+ DID+FEINEAFA+Q +YC
Sbjct: 2 NLPVLGRYIDFQTVGVPPEIMGVGPAYAIPKVLEATGLQVQDIDIFEINEAFAAQALYCI 61
Query: 373 NKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGA 432
+KLG+D K+N GGA+A+GHPLG TGAR VAT+L E+K+ + GV+SMCIGTGMGA
Sbjct: 62 HKLGIDLNKVNPRGGAIALGHPLGCTGARQVATILRELKKD----QIGVVSMCIGTGMGA 117
Query: 433 AAVFER 438
AA+F +
Sbjct: 118 AAIFIK 123
|
| >d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} Length = 125 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Score = 130 bits (327), Expect = 5e-37
Identities = 58/124 (46%), Positives = 80/124 (64%), Gaps = 4/124 (3%)
Query: 317 LGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNK-- 374
L R A GV P IMG+GP A A++ AGL D+ L E+NEAFA+Q + +
Sbjct: 3 LARVRAIAVAGVPPRIMGIGPVPATRKALERAGLSFSDLGLIELNEAFAAQALAVLREWS 62
Query: 375 LGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAA 434
L ++ +++N NGGA+A+GHPLG +GAR + TL+HEM+RR +FG+ +MCIG G G A
Sbjct: 63 LSMEDQRLNPNGGAIALGHPLGASGARILTTLVHEMRRRK--VQFGLATMCIGVGQGIAV 120
Query: 435 VFER 438
V E
Sbjct: 121 VVEG 124
|
| >d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} Length = 128 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Score = 125 bits (314), Expect = 4e-35
Identities = 66/129 (51%), Positives = 82/129 (63%), Gaps = 5/129 (3%)
Query: 313 GLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCR 372
GL L V R+ A GVDPAIMG GP A A+K AGL + DID E+NEAFA+Q +
Sbjct: 1 GLEPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLNMADIDFIELNEAFAAQALPVL 60
Query: 373 N---KLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTG 429
L EK+N++GGA+A+GHP G +GAR TLL+ MK+ G FG+ +MCIG G
Sbjct: 61 KDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQNGG--TFGLSTMCIGLG 118
Query: 430 MGAAAVFER 438
G A VFER
Sbjct: 119 QGIATVFER 127
|
| >d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 372 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Polyketide synthase PKS18 species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 44.8 bits (105), Expect = 1e-05
Identities = 23/168 (13%), Positives = 51/168 (30%), Gaps = 28/168 (16%)
Query: 295 SDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVDPA------------IMGVGPAV--- 339
DG A+++ V + + V +F+ + + + +
Sbjct: 204 GDGCAALVIGASQVQEKLEPGKVVVRSSFSQLLDNTEDGIVLGVNHNGITCELSENLPGY 263
Query: 340 -------AIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIG 392
+ + GLQ+ DIDL+ I+ LG+ E + +
Sbjct: 264 IFSGVAPVVTEMLWDNGLQISDIDLWAIHPGGPKIIEQSVRSLGISAELAAQS---WDVL 320
Query: 393 HPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMG---AAAVFE 437
G + + +L M ++ + + G G +F+
Sbjct: 321 ARFGNMLSVSLIFVLETMVQQAESAKAISTGVAFAFGPGVTVEGMLFD 368
|
| >d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} Length = 459 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Score = 38.6 bits (90), Expect = 0.001
Identities = 16/68 (23%), Positives = 25/68 (36%), Gaps = 3/68 (4%)
Query: 200 SENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTIS 259
SE +T E D V + + A AAG ++ E+ V VD + T
Sbjct: 214 SEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQ-ELNGVKV--VDGRKEASSLFTRY 270
Query: 260 VDDGIRPN 267
+ P+
Sbjct: 271 IPIANNPH 278
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 462 | |||
| d1wdkc1 | 262 | Fatty oxidation complex beta subunit (3-ketoacyl-C | 100.0 | |
| d1afwa1 | 269 | Thiolase {Baker's yeast (Saccharomyces cerevisiae) | 100.0 | |
| d1m3ka1 | 268 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 100.0 | |
| d1ulqa1 | 273 | Beta-ketoadipyl CoA thiolase {Thermus thermophilus | 100.0 | |
| d1m3ka2 | 124 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 100.0 | |
| d1afwa2 | 124 | Thiolase {Baker's yeast (Saccharomyces cerevisiae) | 100.0 | |
| d1ulqa2 | 125 | Beta-ketoadipyl CoA thiolase {Thermus thermophilus | 100.0 | |
| d1wdkc2 | 128 | Fatty oxidation complex beta subunit (3-ketoacyl-C | 100.0 | |
| d1teda_ | 372 | Polyketide synthase PKS18 {Mycobacterium tuberculo | 99.82 | |
| d1tqyb2 | 194 | Actinorhodin polyketide putative beta-ketoacyl syn | 99.56 | |
| d1hnja1 | 174 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 99.54 | |
| d1u6ea1 | 184 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 99.51 | |
| d1mzja1 | 181 | Priming beta-ketosynthase from the r1128 polyketid | 99.51 | |
| d1tqya2 | 205 | Actinorhodin polyketide putative beta-ketoacyl syn | 99.5 | |
| d1ub7a1 | 172 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 99.47 | |
| d1j3na1 | 249 | Beta-ketoacyl-ACP synthase II {Thermus thermophilu | 99.47 | |
| d2gfva1 | 250 | Beta-ketoacyl-ACP synthase II {Escherichia coli [T | 99.45 | |
| d1ox0a1 | 256 | Beta-ketoacyl-ACP synthase II {Streptococcus pneum | 99.43 | |
| d1e5ma1 | 250 | Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ | 99.33 | |
| d1u0ma1 | 200 | Putative polyketide synthase SCO1206 {Streptomyces | 99.17 | |
| d2vbaa1 | 253 | Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta | 99.17 | |
| d1ox0a2 | 158 | Beta-ketoacyl-ACP synthase II {Streptococcus pneum | 99.11 | |
| d2ix4a1 | 270 | Beta-ketoacyl-ACP synthase II {Thale cress (Arabid | 99.07 | |
| d1e5ma2 | 161 | Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ | 99.05 | |
| d2gfva2 | 161 | Beta-ketoacyl-ACP synthase II {Escherichia coli [T | 99.03 | |
| d1j3na2 | 159 | Beta-ketoacyl-ACP synthase II {Thermus thermophilu | 99.01 | |
| d1bi5a1 | 235 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 98.99 | |
| d1xpma1 | 166 | 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap | 98.93 | |
| d1tqyb1 | 208 | Actinorhodin polyketide putative beta-ketoacyl syn | 98.88 | |
| d1tqya1 | 216 | Actinorhodin polyketide putative beta-ketoacyl syn | 98.87 | |
| d2ix4a2 | 161 | Beta-ketoacyl-ACP synthase II {Thale cress (Arabid | 98.87 | |
| d1u6ea2 | 148 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 98.67 | |
| d1ub7a2 | 149 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 98.54 | |
| d2vbaa2 | 151 | Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta | 98.45 | |
| d1hnja2 | 143 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 98.43 | |
| d1mzja2 | 153 | Priming beta-ketosynthase from the r1128 polyketid | 98.33 | |
| d1u0ma2 | 148 | Putative polyketide synthase SCO1206 {Streptomyces | 97.98 | |
| d1u0ua2 | 156 | Dihydropinosylvin synthase {Scots pine (Pinus sylv | 97.69 | |
| d1ee0a2 | 160 | Pyrone synthase (PyS, chalcone synthase 2) {Gerber | 97.64 | |
| d1bi5a2 | 154 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 97.58 | |
| d1u6ea2 | 148 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 93.75 | |
| d1u0ma1 | 200 | Putative polyketide synthase SCO1206 {Streptomyces | 93.7 | |
| d1bi5a1 | 235 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 93.01 | |
| d1ub7a2 | 149 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 92.13 | |
| d1ub7a1 | 172 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 91.65 | |
| d1hnja1 | 174 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 91.63 | |
| d1teda_ | 372 | Polyketide synthase PKS18 {Mycobacterium tuberculo | 91.32 | |
| d1hnja2 | 143 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 90.55 | |
| d1mzja2 | 153 | Priming beta-ketosynthase from the r1128 polyketid | 89.86 | |
| d1xpma2 | 221 | 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap | 88.02 | |
| d1u6ea1 | 184 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 85.81 | |
| d1okja1 | 106 | Hypothetical protein YeaZ {Escherichia coli [TaxId | 81.46 |
| >d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Probab=100.00 E-value=9.2e-53 Score=407.15 Aligned_cols=258 Identities=37% Similarity=0.490 Sum_probs=229.6
Q ss_pred CCCcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHH-cCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCC
Q 012506 48 YGDDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEK-TNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFP 126 (462)
Q Consensus 48 ~~~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~-agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp 126 (462)
++++|||||+.||||+|.++|.+++.++.||+..+++++|++ +|+++++||.+++|++.+...++++++|.+++..|+|
T Consensus 3 n~r~v~Iv~a~RTP~g~~~gg~~~~~~~~dL~~~~i~~~l~r~agi~~~~Id~vi~G~v~~~~~~g~n~aR~~al~ag~p 82 (262)
T d1wdkc1 3 NPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQIP 82 (262)
T ss_dssp CTTCEEEEEEEECCCEETTTCTTTTCCHHHHHHHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTSSSC
T ss_pred CCCcEEEEeeeeCceeCCCCccccCCCHHHHHHHHHHHHHHhcCCCCHHHeeEEEEEeecccccccccchhhhHhhhhcc
Confidence 348999999999999997678899999999999999999996 8999999999999999887766889999999999999
Q ss_pred CCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHH
Q 012506 127 ETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHR 206 (462)
Q Consensus 127 ~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~ 206 (462)
.++|+++||++|+||++||..|++.|++|++|++|++|+|+||+.|+.......+. ... ....+...||.++++++++
T Consensus 83 ~~vp~~tV~~~C~Sgl~Ai~~aa~~I~sG~~dvvlAgGvEsmS~~p~~~~~~~~~~-~~~-~~~~~~~~mg~tae~~a~~ 160 (262)
T d1wdkc1 83 HTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVSMMHGVDPNPH-MSL-YAAKASGMMGLTAEMLGKM 160 (262)
T ss_dssp TTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCTTTTBCCCGG-GGG-TSCGGGGSHHHHHHHHHHH
T ss_pred cccchhhccccccHHHHHHHHHHHHHHhhcCCceeeeccccccccccccccccccc-ccc-cccccccchhhhHHHHHHH
Confidence 99999999999999999999999999999999999999999999887543222111 111 1122346799999999999
Q ss_pred hCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC-CCC
Q 012506 207 FGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK-DGT 285 (462)
Q Consensus 207 ~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p-~g~ 285 (462)
|||+|+++|+|++.||++|.+|+++|+|++||+||+++.++. ...+++.|+++|+++|+|.|.++||+|++ +|+
T Consensus 161 ~gisRe~~D~~a~~S~~ra~~A~~~G~f~~ei~pv~~~~~~~-----~~~~~~~De~~R~~tt~E~La~LkP~f~~~~Gt 235 (262)
T d1wdkc1 161 HGISREQQDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDENG-----FLKIFDYDETIRPDTTLESLAALKPAFNPKGGT 235 (262)
T ss_dssp HTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEECTTC-----CEEEECSCTTCCTTCCHHHHHTSCCSSCTTTCC
T ss_pred hccccccchhhhhhhhhhhhhHhhcCCcceeeeeeccccccc-----cccccccccCCCCCCCHHHHcCCCCcccCCCCc
Confidence 999999999999999999999999999999999998864332 23467899999999999999999999986 799
Q ss_pred cccCCCCCcCCcceEEEEeCHHHHHhc
Q 012506 286 TTAGNSSQVSDGAGAVLLMKRSVAMRK 312 (462)
Q Consensus 286 ~t~~~~s~~sDGAaAvvL~s~e~A~~~ 312 (462)
+|++|+|+++|||+++||+|+++|++|
T Consensus 236 vTagnsS~isDGAAavll~se~~akeL 262 (262)
T d1wdkc1 236 VTAGTSSQITDGASCMIVMSAQRAKDL 262 (262)
T ss_dssp CCGGGBCCCEEEEEEEEEEEHHHHHHT
T ss_pred CcchhhChHHHHHHHHHHhCHHHHhcC
Confidence 999999999999999999999999986
|
| >d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=8e-53 Score=408.84 Aligned_cols=252 Identities=44% Similarity=0.653 Sum_probs=225.6
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHc----CCCccccCcEEEEeccCCCCccccHHHHHHHHcCC
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKT----NVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGF 125 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~a----gl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Gl 125 (462)
+|||||++.||||+|.++|.|++.++.+|+..+++++|+++ +++|++||.+++|++++.+. +.+++|++++..|+
T Consensus 10 ~dvvIv~a~RTP~gr~~~G~l~~~~~~~L~~~~i~~~l~r~~~~~~idp~~Id~vi~G~v~~~g~-~~~~aR~~al~agl 88 (269)
T d1afwa1 10 EDVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGA-GATEHRAACLASGI 88 (269)
T ss_dssp TCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGG-GHHHHHHHHHHTTC
T ss_pred CCEEEEcceeCcceeCCCCCCCCCCHHHHHHHHHHHHHHhCCccccCChhhcCEEEecccccccc-ccccchhhhhhccc
Confidence 99999999999999877899999999999999999999865 69999999999999988764 78999999999999
Q ss_pred CCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCC---CCChhhhhhhhhhcccccHHHHHHH
Q 012506 126 PETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEG---SVNPKVKAFEQAQNCLLPMGVTSEN 202 (462)
Q Consensus 126 p~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~~a~~ 202 (462)
|.++|+++||++|+||++||..|++.|++|++|++|++|+|+||+.|..... .....+.......++..+||.++|+
T Consensus 89 p~~vpa~tVnr~CaSg~~Ai~~Aa~~I~~G~~divlagG~EsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~Mg~tAe~ 168 (269)
T d1afwa1 89 PYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNNYKNVNPLGMISSEELQKNREAKKCLIPMGITNEN 168 (269)
T ss_dssp CTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHHHHGGGSCTTCSCCCHHHHHCTTGGGGGSCHHHHHHH
T ss_pred cccccchhccccchHHHHHHHHHHHHHhhccccceeeeecccccccccccccccccccchhccccccccccccccccccc
Confidence 9999999999999999999999999999999999999999999987654321 1122233333445567899999999
Q ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccC
Q 012506 203 VAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKK 282 (462)
Q Consensus 203 ~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p 282 (462)
++++|||+||+||+|++.||++|..|+++|+|.+||+|+++.. ..+++.||++|+.+|+|+|.++||+|.+
T Consensus 169 ~a~~~~isRee~D~~a~~S~~rA~~A~~~g~f~~eivpv~~~~---------~~~~~~De~~R~~tt~E~La~L~P~f~~ 239 (269)
T d1afwa1 169 VAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLPD---------GSICQSDEGPRPNVTAESLSSIRPAFIK 239 (269)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHHHHHTTSSTTTBCCEECTT---------SCEECSCSSCCSCCCHHHHHHCCBSCC-
T ss_pred chhhcCccHHHHhhHHHHHHHHHHHHHhcCCcceEecceeccc---------ccEEecCCCcCCCCCHHHHcCCCCccCC
Confidence 9999999999999999999999999999999999999997631 1368999999999999999999999965
Q ss_pred -CCCcccCCCCCcCCcceEEEEeCHHHHHh
Q 012506 283 -DGTTTAGNSSQVSDGAGAVLLMKRSVAMR 311 (462)
Q Consensus 283 -~g~~t~~~~s~~sDGAaAvvL~s~e~A~~ 311 (462)
+|++|++|+|+++|||+|+||+|+++|++
T Consensus 240 ~~G~vTagnsS~~sDGAAavll~se~~A~e 269 (269)
T d1afwa1 240 DRGTTTAGNASQVSDGVAGVLLARRSVANQ 269 (269)
T ss_dssp --CCCBTTTBCCBEEEEEEEEEEEHHHHHH
T ss_pred CCCeEcchhcChHHHHHHHHHHhhHHHhcC
Confidence 59999999999999999999999999985
|
| >d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=100.00 E-value=4.5e-52 Score=403.72 Aligned_cols=256 Identities=38% Similarity=0.535 Sum_probs=228.7
Q ss_pred CcEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCc
Q 012506 50 DDVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETV 129 (462)
Q Consensus 50 ~~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~ 129 (462)
.+||||++.||||+| ++|.|++.++.||+..+++++|++++|++++||.+++|++.+.+. ++|++|++++.+|+|.++
T Consensus 3 ~~V~Iv~~~RTP~g~-~~G~l~~~~~~dL~~~~~~~~l~~~~i~~~~Id~vi~G~~~~~~~-~~n~ar~~al~aglp~~v 80 (268)
T d1m3ka1 3 PSIVIASAARTAVGS-FNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGE-GQNPARQAAMKAGVPQEA 80 (268)
T ss_dssp CCEEEEEEEECCCEE-TTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTS-CSCHHHHHHHHTTCCTTS
T ss_pred CCEEEEeceeCcccC-CCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCcEEEEeeccccCc-chHHHhHHHHHhCCcccc
Confidence 579999999999998 689999999999999999999999999999999999999998775 889999999999999999
Q ss_pred ceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCCC----C-Chh-----hhhhhhhhcccccHHHH
Q 012506 130 PVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGS----V-NPK-----VKAFEQAQNCLLPMGVT 199 (462)
Q Consensus 130 p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~~----~-~~~-----~~~~~~~~~~~~~~g~~ 199 (462)
|+++|+++|+||++||..|+++|++|++|++|++|+|+||+.|+.+... . ... +.+..........||.+
T Consensus 81 pa~tv~~~C~Sg~~Ai~~Aa~~I~~G~~dvvlagG~EsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~l~d~~~~~~Mg~~ 160 (268)
T d1m3ka1 81 TAWGMNQLAGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTT 160 (268)
T ss_dssp EEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEESTTCCEEECCSSCCSSSCEEEEEHHHHHHTBCTTTCSBHHHH
T ss_pred cceeecccCcccchHHHHHHHHHhCCCceEEeeccccccccCchhhhcccCCcCCCcccccccccccCcCcccCCcHHHH
Confidence 9999999999999999999999999999999999999999988744311 1 111 11111111233679999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCc
Q 012506 200 SENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPV 279 (462)
Q Consensus 200 a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~ 279 (462)
+|+++++||||||+||+|++.||++|..|+++|+|++||+|+..+.+ .+.+++++|+++|+++|+|.|.++||+
T Consensus 161 Ae~~A~~~gisRe~~D~~A~~S~~ra~~A~~~g~f~~ei~p~~~~~~------~g~~~v~~d~~~r~~tt~e~L~~L~p~ 234 (268)
T d1m3ka1 161 AENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGR------KGDITVDADEYIRHGATLDSMAKLRPA 234 (268)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEECCT------TCCEEECSCSSCCTTCCHHHHHTCCBS
T ss_pred HHHHHHHHCcCHHHHHHHHHHHHHHhhhHHHcCCchhhccccccCCC------CCCeEEeCCCCCCCCCCHHHHcCCCCC
Confidence 99999999999999999999999999999999999999999876432 234679999999999999999999999
Q ss_pred ccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcC
Q 012506 280 FKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKG 313 (462)
Q Consensus 280 f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g 313 (462)
|+++|++|.+|+|+++|||+|+||+|+++|+++|
T Consensus 235 f~~~GtvTagnss~~~DGAAa~ll~se~~a~~~G 268 (268)
T d1m3ka1 235 FDKEGTVTAGNASGLNDGAAAALLMSEAEASRRG 268 (268)
T ss_dssp SCTTCCCBSSSBCCCEEEEEEEEEEEHHHHHHHT
T ss_pred cCCCCcEEChhhChHHHHHHHHHHhhHHHHHhcC
Confidence 9999999999999999999999999999999987
|
| >d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=2.3e-52 Score=407.46 Aligned_cols=257 Identities=42% Similarity=0.594 Sum_probs=229.2
Q ss_pred cEEEEEeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcc
Q 012506 51 DVVIVAAYRTALCKSKRGGFKDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVP 130 (462)
Q Consensus 51 ~v~Ivg~~rTp~~~~~~g~~~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p 130 (462)
++|||++.||||+| ++|.|++.++.||+..+++++|++++|++++||.+++|++.+.+.++.+++|++++..|+|.++|
T Consensus 1 ~a~Iv~~~RTPfgk-~~G~l~~~~~~dL~~~a~~~al~~~~i~~~~Id~vi~G~v~~~g~~~~n~aR~~al~aGlp~~vp 79 (273)
T d1ulqa1 1 EAWIVEAVRTPIGK-HGGALASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEVA 79 (273)
T ss_dssp CEEEEEEEECCCEE-TTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTCCTTCE
T ss_pred CEEEEccccCcccc-CCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCccc
Confidence 58999999999999 67999999999999999999999999999999999999998876667899999999999999999
Q ss_pred eEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCCCCCCCCC-----CCCh----------hhhh-hhhhhcccc
Q 012506 131 VRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEG-----SVNP----------KVKA-FEQAQNCLL 194 (462)
Q Consensus 131 ~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~~~~~~~~-----~~~~----------~~~~-~~~~~~~~~ 194 (462)
+++||++|+||++||.+|++.|++|.+|++|++|+|+||+.|+.... .... .+.+ ......+..
T Consensus 80 ~~tVn~~CaSg~~Ai~~a~~~I~~G~~d~~lagG~EsmS~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (273)
T d1ulqa1 80 GCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGTE 159 (273)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESSSCCEEECCCCSSSCCSCEEEEETTSSCCSCCHHHHHHSCCC
T ss_pred eEEEecccchHHHHHHHHHHHHhcCCCccceeeeccccchhhhccccccccccCCCcccccccccccccchhhhcccccc
Confidence 99999999999999999999999999999999999999998864221 1100 0111 111123446
Q ss_pred cHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHh
Q 012506 195 PMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAAGKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELA 274 (462)
Q Consensus 195 ~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~ 274 (462)
.|+.++|+++++||||||+||+|+++||+++..|+++|+|++||+|+.+.. .++++++++|+++|+++|+|+|.
T Consensus 160 ~m~~~ae~~a~~~~itRe~~D~~a~~S~~ra~~A~~~g~f~~eivp~~~~~------~~~~~~v~~d~~~r~~tt~e~La 233 (273)
T d1ulqa1 160 SMGETAENLAEMYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKR------GKEEILVEQDEGPRRDTSLEKLA 233 (273)
T ss_dssp CHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEE------TTEEEEECSCSCCCTTCCHHHHH
T ss_pred chHHHHHHHHhhcCCCHHHHHHHHhhHHHHHHHHHHcCCcceeeeeecccc------ccCceEEeCCCCcCCCCCHHHHc
Confidence 799999999999999999999999999999999999999999999986643 23456789999999999999999
Q ss_pred cCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHhcCC
Q 012506 275 KLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGL 314 (462)
Q Consensus 275 ~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~ 314 (462)
++||+|+|+|++|.+|+|+++|||+|+||+|+++|+++|+
T Consensus 234 ~L~p~f~~~G~vTagnss~~sDGAAa~vl~se~~a~~lGL 273 (273)
T d1ulqa1 234 ALRPVFREGGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGL 273 (273)
T ss_dssp HSCBSSSTTCSCBGGGBCCCEEEEEEEEEEEHHHHHHTTC
T ss_pred cCCCCcCCCCcEEchhhchHHHHHHHHHHccHHHHHHcCC
Confidence 9999999999999999999999999999999999999985
|
| >d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=100.00 E-value=1.9e-35 Score=249.69 Aligned_cols=123 Identities=52% Similarity=0.875 Sum_probs=120.6
Q ss_pred CCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCC
Q 012506 314 LPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGH 393 (462)
Q Consensus 314 ~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Gh 393 (462)
++|+++|++++..+++|..|+.+|..|++++|+++|++++|||+||+||+|+++.+.+.++||++++++|++||++++||
T Consensus 1 L~Plari~~~a~~g~dP~~mg~~Pv~A~~~lL~r~gl~~~Did~~EinEAFA~q~la~~~~l~id~~kvN~~GGaiAlGH 80 (124)
T d1m3ka2 1 IQPLGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLVEANEAFAAQACAVNKDLGWDPSIVNVNGGAIAIGH 80 (124)
T ss_dssp CCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCSEEEECCSBHHHHHHHHHHHCCCGGGBSTTCCHHHHCC
T ss_pred CCcEEEEEEEEEEecChHHhccchHHHHHHHHHHcCCChhcccHHHhcccchhheeeehHhhCCChhhcCCCCCcccccc
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEe
Q 012506 394 PLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 394 p~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
|+||||+|.+++++++|+++++ ++|++++|+|||+|.|++||+
T Consensus 81 P~GaSGarl~~tl~~~L~~~~~--~~Glas~C~gGG~g~A~liE~ 123 (124)
T d1m3ka2 81 PIGASGARILNTLLFEMKRRGA--RKGLATLCIGGGMGVAMCIES 123 (124)
T ss_dssp CTTTHHHHHHHHHHHHHHHHTC--SEEEEEEEETTTEEEEEEEEC
T ss_pred CcCccchhHHHHHHHHHHhcCC--CEEEEEecccccceeEEEEEe
Confidence 9999999999999999999988 999999999999999999997
|
| >d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2.9e-35 Score=248.87 Aligned_cols=124 Identities=61% Similarity=1.064 Sum_probs=120.6
Q ss_pred cCCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCcccc
Q 012506 312 KGLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAI 391 (462)
Q Consensus 312 ~g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~ 391 (462)
+|++|+++|++|+..+++|..|+++|..|++++|+++|++++|||+||+||+|+.+.+.+.++|+++++++|++||++++
T Consensus 1 Lgl~plAri~~~a~~g~~P~~m~~gPv~Ai~klL~r~gl~~~Did~~EinEAFA~q~l~~~~~l~id~~kvN~~GGaiAl 80 (124)
T d1afwa2 1 LNLPVLGRYIDFQTVGVPPEIMGVGPAYAIPKVLEATGLQVQDIDIFEINEAFAAQALYCIHKLGIDLNKVNPRGGAIAL 80 (124)
T ss_dssp TTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHHTCCGGGCSEEEECCSBHHHHHHHHHHHTCCGGGBSTTCCHHHH
T ss_pred CCCcEEEEEEEEEEEecCHHHhhhChHHHHHHHHHHcCCCcccCcEEEeccchhHHHHHHHHHcCCChhhccccCcccee
Confidence 58899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEec
Q 012506 392 GHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFERG 439 (462)
Q Consensus 392 Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~~ 439 (462)
|||+||||+|.+++++++|++ + ++|++++|+|||+|.|++|||+
T Consensus 81 GHP~GaSGarlv~~l~~~L~~--~--~~glas~C~ggG~G~a~~ier~ 124 (124)
T d1afwa2 81 GHPLGCTGARQVATILRELKK--D--QIGVVSMCIGTGMGAAAIFIKE 124 (124)
T ss_dssp CBCTTTHHHHHHHHHHHHSCT--T--CEEEEEEEETTTEEEEEEEEEC
T ss_pred cCCcCCchHHHHHHHHHHhcc--C--CEEEEEEcccCCcEEEEEEEeC
Confidence 999999999999999999975 3 7999999999999999999986
|
| >d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=1.5e-34 Score=244.49 Aligned_cols=122 Identities=48% Similarity=0.830 Sum_probs=118.0
Q ss_pred CceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCCHHHHHHHHHH--cCCCCCCCCCCCCccccC
Q 012506 315 PILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNK--LGLDPEKINVNGGALAIG 392 (462)
Q Consensus 315 ~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~~~e~--LGl~~~~vn~~GG~~a~G 392 (462)
+|+++|++|+..+++|..|+.+|..|++++|+++|++++|||+||+||+|+++.+.++++ |+++++++|++||++++|
T Consensus 1 KPlA~i~~~~~~g~~P~~~~~~P~~A~~~~L~r~gl~~~Did~~EinEAFAaq~l~~~~~~~l~~d~~kvN~~GGaIAlG 80 (125)
T d1ulqa2 1 RPLARVRAIAVAGVPPRIMGIGPVPATRKALERAGLSFSDLGLIELNEAFAAQALAVLREWSLSMEDQRLNPNGGAIALG 80 (125)
T ss_dssp CCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHTTCCGGGCSEEEECCSBHHHHHHHHHHHTCCTTCTTBSTTCCHHHHC
T ss_pred CCeEEEEEEEEEecCHHHHhhccHHHHHhHhhccCcCccccchheeccccchhHHHHHHHhhccCchhhcCCCCCccccc
Confidence 488999999999999999999999999999999999999999999999999999999998 566888999999999999
Q ss_pred CccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEe
Q 012506 393 HPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 393 hp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
||+||||+|.+++++++|+++++ ++|++++|+|||+|.|+++|+
T Consensus 81 HP~GASGari~~tl~~~L~~~~~--~~G~as~C~gGG~g~A~~iE~ 124 (125)
T d1ulqa2 81 HPLGASGARILTTLVHEMRRRKV--QFGLATMCIGVGQGIAVVVEG 124 (125)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTC--SEEEEEEEETTTEEEEEEEEE
T ss_pred CCccccchhHHHHHHHHHHhcCC--CEEEEEecccccceeEEEEEe
Confidence 99999999999999999999988 999999999999999999997
|
| >d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Probab=100.00 E-value=6.3e-34 Score=241.94 Aligned_cols=124 Identities=53% Similarity=0.872 Sum_probs=119.4
Q ss_pred CCCceEEEEEEEEeccCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCCHHHHHHHHHHcCC---CCCCCCCCCCcc
Q 012506 313 GLPILGVFRTFAAVGVDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGL---DPEKINVNGGAL 389 (462)
Q Consensus 313 g~~~~~~i~g~~~~~~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~~~e~LGl---~~~~vn~~GG~~ 389 (462)
|++|+++|++++..+++|..|+++|..|++++|+++||+++|||+||+||+|+.+.+.+.+++++ +++++|++||.+
T Consensus 1 Gl~pla~i~~~~~~g~dP~~mg~~p~~A~~klL~ragl~~~did~~EinEAFA~q~l~~~~~~~~~~~~~ekvN~~GGai 80 (128)
T d1wdkc2 1 GLEPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLNMADIDFIELNEAFAAQALPVLKDLKVLDKMNEKVNLHGGAI 80 (128)
T ss_dssp TCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCCEEEECCSBHHHHHHHHHHTTCGGGHHHHBSTTCCHH
T ss_pred CCCEEEEEEEEEEEecCHHHhccCcHHHHHHHhhhcCccccccceEEeecccchhhhhhhhhcccccCCcceecCCCCcc
Confidence 67899999999999999999999999999999999999999999999999999999999999776 447999999999
Q ss_pred ccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeEEEEEEe
Q 012506 390 AIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 390 a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
++|||+||||+|.+.+++++|+++++ ++|++++|+|||+|.|++|||
T Consensus 81 AlGHP~GASGaRlv~~l~~~L~~~~~--~~Glas~C~gGG~g~A~~iEr 127 (128)
T d1wdkc2 81 ALGHPFGCSGARISGTLLNVMKQNGG--TFGLSTMCIGLGQGIATVFER 127 (128)
T ss_dssp HHCCCHHHHHHHHHHHHHHHHHHTTC--SEEEEEEEETTTEEEEEEEEC
T ss_pred cccccccccchhHHHHHHHHHHhcCC--CEEEEEecccccceeEEEEEe
Confidence 99999999999999999999999988 999999999999999999997
|
| >d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Polyketide synthase PKS18 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.82 E-value=2e-20 Score=188.42 Aligned_cols=256 Identities=18% Similarity=0.183 Sum_probs=172.0
Q ss_pred CCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEec-CCCchHHHHHHHHHHH
Q 012506 73 TYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADVAAA 151 (462)
Q Consensus 73 ~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~-~~CsSgl~Ai~~Aa~~ 151 (462)
.+..+|+.+|+++||+++|++++|||.||+++.. +.. .|..+.+++..+|++..+..+.++ .+|+++++||..|..+
T Consensus 90 e~~~~la~~Aa~~aL~~ag~~~~dId~lI~~t~t-~~~-~P~~a~~v~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~ 167 (372)
T d1teda_ 90 EHAVPLAVDVSKRALAGLPYRAAEIGLLVLATST-GFI-APGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNY 167 (372)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESS-CCC-SSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccC-CCC-CchHHHHHHhhhccCCceeEeeccccCccHHHHHHHHHHHH
Confidence 3567899999999999999999999999999875 343 678899999999997666677775 5899999999999999
Q ss_pred HHccCCCEEEEEeecCCCCCCCCCCCCCChhhhhhhhhhcccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHc
Q 012506 152 IKAGFYDIGIGAGLESMTVNPMAWEGSVNPKVKAFEQAQNCLLPMGVTSENVAHRFGVTRKEQDQAAVDSHRKAAAATAA 231 (462)
Q Consensus 152 I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~gisre~~~~~a~~s~~~A~~a~~~ 231 (462)
|++|.++.+|++++|.+|......
T Consensus 168 l~sg~~~~~LVV~~E~~s~~~~~~-------------------------------------------------------- 191 (372)
T d1teda_ 168 VRAHPAMKALVVCIELCSVNAVFA-------------------------------------------------------- 191 (372)
T ss_dssp HHHSTTCEEEEEEEEECGGGCCCC--------------------------------------------------------
T ss_pred HhcCCCccceeeeehhhcccccCC--------------------------------------------------------
Confidence 999999999999999876411000
Q ss_pred CCCccccccceecccCCCCCCCCceEEeccCCCCCCCCHHHHhcCCCcccCCCCcccCCCCCcCCcceEEEEeCHHHHHh
Q 012506 232 GKFKDEIIPVATKIVDPKTGDEKPVTISVDDGIRPNTSVSELAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMR 311 (462)
Q Consensus 232 g~f~~ei~p~~~~~~np~a~~~~~~~v~~d~~~r~~~t~e~l~~~~p~f~p~g~~t~~~~s~~sDGAaAvvL~s~e~A~~ 311 (462)
| ..++. ...+..+|||+|+||.+.+....
T Consensus 192 -----------------------------d-------~~~~~---------------~~~~lfGDGAaA~ll~~~~~~~~ 220 (372)
T d1teda_ 192 -----------------------------D-------DINDV---------------VIHSLFGDGCAALVIGASQVQEK 220 (372)
T ss_dssp -----------------------------S-------SHHHH---------------HHHHHBCEEEEEEEEEEECTTSC
T ss_pred -----------------------------C-------cchhh---------------hhhhhhcccceeEEeccCCcccc
Confidence 0 00000 00011589999999986553322
Q ss_pred cCCCceEEEEEEEEeccC-----------CC-C---CC--------ccHHHHHHHHHHHcCCCCCCccEEEecCCCHHHH
Q 012506 312 KGLPILGVFRTFAAVGVD-----------PA-I---MG--------VGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQF 368 (462)
Q Consensus 312 ~g~~~~~~i~g~~~~~~~-----------p~-~---~~--------~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~~ 368 (462)
.... ...+.+....... .. . .+ ......++++|+++|++++|||+|-+|+.+..+.
T Consensus 221 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~did~~i~Hq~~~~i~ 299 (372)
T d1teda_ 221 LEPG-KVVVRSSFSQLLDNTEDGIVLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQISDIDLWAIHPGGPKII 299 (372)
T ss_dssp CCTT-CEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTTCCGGGCSCEEECCSCHHHH
T ss_pred cCCc-eeEEecccccccCCCccccccCCCCCcceeechHHHHHHHHHHHHHHHHHHHHhcCCCHHHhhhhhccCccHHHH
Confidence 2211 1122222211100 00 0 00 0124678899999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCCCCC-ccccCCccchHHHHHHHHHHHHHHhcCCCCcEEEEEeecccceeE-EEEEEecc
Q 012506 369 VYCRNKLGLDPEKINVNGG-ALAIGHPLGTTGARCVATLLHEMKRRGRDCRFGVISMCIGTGMGA-AAVFERGD 440 (462)
Q Consensus 369 ~~~~e~LGl~~~~vn~~GG-~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~~~gl~~~~~G~G~g~-A~v~~~~~ 440 (462)
..+.+.||++++++..+=- +--+||..++|-...+.+++.+-+...+ -+++|+.. .|.|+.+ ++||+-.+
T Consensus 300 ~~i~~~Lgl~~ek~~~s~~~l~~~GN~~sasip~~L~~~l~~g~~~~g-~d~vll~~-fG~G~s~~~~ll~~~~ 371 (372)
T d1teda_ 300 EQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMVQQAESAKA-ISTGVAFA-FGPGVTVEGMLFDIIR 371 (372)
T ss_dssp HHHHHHHTCCGGGGHHHHHHHHHHCBCTHHHHHHHHHHHHHSCSSSSS-SEEEEEEE-EETTTEEEEEEEEECC
T ss_pred HHHHHHcCCCHHHhhhhHHHHhccCCcHHHHHHHHHHHHHHhCCCCCC-CCEEEEEE-EcHHHhHHHHhheeec
Confidence 9999999999988643211 1226888777744444333332111111 15666643 5677666 56776544
|
| >d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.56 E-value=6e-14 Score=127.94 Aligned_cols=153 Identities=20% Similarity=0.195 Sum_probs=117.8
Q ss_pred CCCcccC--CCCcccCCCCCcCCcceEEEEeCHHHHHhcCC-CceEEEEEEEEeccCC--CCCCccHHHHHHHHHHHcCC
Q 012506 276 LKPVFKK--DGTTTAGNSSQVSDGAGAVLLMKRSVAMRKGL-PILGVFRTFAAVGVDP--AIMGVGPAVAIPAAVKSAGL 350 (462)
Q Consensus 276 ~~p~f~p--~g~~t~~~~s~~sDGAaAvvL~s~e~A~~~g~-~~~~~i~g~~~~~~~p--~~~~~~~~~Ai~~aL~~AGl 350 (462)
+|| ||. +|++ ++||++++||++.+.|+++|. ++++.|.+++...... .....+..++++++|+++|+
T Consensus 6 ~rP-FD~~a~G~~-------~gEGa~~~vLe~~~~A~~rg~~~i~a~i~g~~~~~d~~~~~~~~~g~~~~i~~aL~~a~i 77 (194)
T d1tqyb2 6 YLP-FDERAAGYV-------PGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGSGRPAGLERAIRLALNDAGT 77 (194)
T ss_dssp CCT-TSTTCCCBC-------BBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTCCCCCSHHHHHHHHHHHHTC
T ss_pred cCc-ccCCCCCEe-------eEeeEEEEEEeEHHHHHhcCCceeeeeeecccccccccccccchhhhhhhhhhhcccccc
Confidence 345 765 4655 899999999999999999997 6899999998765322 22234567899999999999
Q ss_pred CCCCccEEEecCCCHHH----HHHHH-HHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcC-----------
Q 012506 351 QLDDIDLFEINEAFASQ----FVYCR-NKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG----------- 414 (462)
Q Consensus 351 ~~~DID~~eihdafa~~----~~~~~-e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~----------- 414 (462)
+++|||++|.|.+.+.. |...+ +.+|-.. +.++--+..+||+.+++|+.+++.++..|+..-
T Consensus 78 ~~~di~~v~ahgtGt~~~D~~E~~al~~~f~~~~--~~v~s~K~~~GH~~~AsG~~~li~~~~~l~~g~ipp~~~~~~~~ 155 (194)
T d1tqyb2 78 GPEDVDVVFADGAGVPELDAAEARAIGRVFGREG--VPVTVPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTSVP 155 (194)
T ss_dssp CGGGCCEEECCCCCSHHHHHHHHHHHHHHHCTTC--SEEECGGGGTCBCGGGHHHHHHHHHHHHHHHTSBCCBCSCCCCC
T ss_pred cccceeeeeccccCcccccHHHhhhhhhhhhccc--cccccccccccccccccccceehhhhhhhhhceeccccCCCCCC
Confidence 99999999999988875 33333 3455433 333333555999999999999999999998762
Q ss_pred --------------CCCcEEEEEeecccceeEEEEEEe
Q 012506 415 --------------RDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 415 --------------~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
...++++++....||.+.++||++
T Consensus 156 ~~~~~~~v~~~~~~~~~~~a~v~s~GfgG~na~~vl~~ 193 (194)
T d1tqyb2 156 REYGIDLVLGEPRSTAPRTALVLARGRWGFNSAAVLRR 193 (194)
T ss_dssp GGGCCEECBSSCBCCCCSEEEEEEEETTTEEEEEEEEE
T ss_pred cccCccccCCCCccCCCCEEEEECcCCCceeEEEEEee
Confidence 124788888877788889999986
|
| >d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=99.54 E-value=8.5e-15 Score=131.40 Aligned_cols=98 Identities=17% Similarity=0.184 Sum_probs=92.2
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHH
Q 012506 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAA 150 (462)
Q Consensus 71 ~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~ 150 (462)
++.++.+|+.+|++++|+++++++++||.|++++..++.. .|..+..++..+|++ ++++++++.+|+++++||..|..
T Consensus 47 ~~~~~~~la~~Aa~~al~~a~~~~~~Id~li~~s~~~~~~-~P~~a~~v~~~Lgl~-~~~~~di~~~C~g~~~al~~A~~ 124 (174)
T d1hnja1 47 PNETVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHA-FPSAACQIQSMLGIK-GCPAFDVAAACAGFTYALSVADQ 124 (174)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSCS-SSCHHHHHHHHHTCC-SSCEEEECCGGGHHHHHHHHHHH
T ss_pred CCccchHHHHHHHHHhhhhcccccccccEEEEecCCcccc-ccchhhhhhhccCCC-chhhhhhhhhhccHHHHHHHHHH
Confidence 5778999999999999999999999999999999988875 688999999999996 79999999999999999999999
Q ss_pred HHHccCCCEEEEEeecCCCC
Q 012506 151 AIKAGFYDIGIGAGLESMTV 170 (462)
Q Consensus 151 ~I~sG~~d~vLv~G~E~ms~ 170 (462)
+|++|.++.+|+++.|.+|.
T Consensus 125 ~i~sg~~~~~Lvv~~e~~S~ 144 (174)
T d1hnja1 125 YVKSGAVKYALVVGSDVLAR 144 (174)
T ss_dssp HHHTTSCSEEEEEEEECHHH
T ss_pred HHhcCCcceeEEEeeehhhc
Confidence 99999999999999998764
|
| >d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=99.51 E-value=4.8e-14 Score=127.20 Aligned_cols=98 Identities=19% Similarity=0.135 Sum_probs=91.7
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHH
Q 012506 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAA 150 (462)
Q Consensus 71 ~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~ 150 (462)
+++++.+|+.+|++++|+++++++++||.|++++..++.. .+..+..++..+|.+ ++.+++++.+|+|+++||..|..
T Consensus 54 ~~e~~~~ma~~Aa~~aL~~a~~~~~dId~li~~s~~~~~~-~p~~a~~v~~~l~~~-~~~~~Dv~~~C~g~~~aL~~A~~ 131 (181)
T d1mzja1 54 PDETIQVMGVAASRRALEHAGVDPAEIDLVVVSTMTNFVH-TPPLSVAIAHELGAD-NAGGFDLSAACAGFCHALSIAAD 131 (181)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCC-SSCHHHHHHHHHTCT-TCEEEEEECGGGHHHHHHHHHHH
T ss_pred cCCcHHHHhHHHHHhhhhhccCChhHCeEEEEeccCCccc-cccHHHHHHHhhcCC-CccceeHHhhhccHHHHHHHHhC
Confidence 6889999999999999999999999999999999988776 677888999999985 78999999999999999999999
Q ss_pred HHHccCCCEEEEEeecCCCC
Q 012506 151 AIKAGFYDIGIGAGLESMTV 170 (462)
Q Consensus 151 ~I~sG~~d~vLv~G~E~ms~ 170 (462)
+|++|.++.+|+++.|.+|.
T Consensus 132 ~i~~~~~~~~LvV~~e~~s~ 151 (181)
T d1mzja1 132 AVESGGSRHVLVVATERMTD 151 (181)
T ss_dssp HHHHSSCSCEEEEEEEEGGG
T ss_pred HhhcCCCceeEEeeeccccc
Confidence 99999999999999999865
|
| >d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.50 E-value=9e-14 Score=127.86 Aligned_cols=147 Identities=20% Similarity=0.200 Sum_probs=114.8
Q ss_pred cCCcceEEEEeCHHHHHhcCCCceEEEEEEEEeccC-----CCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCCHHH-
Q 012506 294 VSDGAGAVLLMKRSVAMRKGLPILGVFRTFAAVGVD-----PAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ- 367 (462)
Q Consensus 294 ~sDGAaAvvL~s~e~A~~~g~~~~~~i~g~~~~~~~-----p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~- 367 (462)
++||++++||.+.+.|+++|.++++.|.|++..... +...+.+...+++++|+++|++++|||++|.|.+-+..
T Consensus 19 ~gEGa~~~vL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~a~i~~~~i~~ie~hgtGt~~~ 98 (205)
T d1tqya2 19 LAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESRTDATDIDYINAHGSGTRQN 98 (205)
T ss_dssp EECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCHHH
T ss_pred eEeeEEEEEEeEHHHHHHCCCceEEEEEeeEccccccccCcccccccccchhhhhHHhhhcCCccceeeeeccccccccC
Confidence 899999999999999999999999999999876532 22223345678999999999999999999999988865
Q ss_pred ---HHHHH-HHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcC-------------------------CCCc
Q 012506 368 ---FVYCR-NKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRG-------------------------RDCR 418 (462)
Q Consensus 368 ---~~~~~-e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~-------------------------~~~~ 418 (462)
+...+ +.++-..+++.++.-+..+||+.+++|+.+++.++..|+.+. ...+
T Consensus 99 D~~E~~ai~~~~~~~~~~~~v~s~K~~~GH~~~AsG~~~li~~~~~l~~g~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~ 178 (205)
T d1tqya2 99 DRHETAAYKRALGEHARRTPVSSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTSDPECDLDYVPLEARERKLR 178 (205)
T ss_dssp HHHHHHHHHHHTGGGGGGSCEECTHHHHCBCTTTHHHHHHHHHHHHHHHCEECCBTTCCSBBTTBCSCCCBSSCEECCCS
T ss_pred chhHHHHHHHhhccccCCceeeeecccccccccccchhHHHHHHHHHhCCeEcccCCCCCCCCCCCcccCCCCCcCCCCC
Confidence 33333 344543344555555566999999999999999999999762 0236
Q ss_pred EEEEEeecccceeEEEEEEecc
Q 012506 419 FGVISMCIGTGMGAAAVFERGD 440 (462)
Q Consensus 419 ~gl~~~~~G~G~g~A~v~~~~~ 440 (462)
+++++....||.+.++||+..+
T Consensus 179 ~a~~~s~GfGG~na~~vl~~~~ 200 (205)
T d1tqya2 179 SVLTVGSGFGGFQSAMVLRDAE 200 (205)
T ss_dssp EEEEEEEETTTEEEEEEEECHH
T ss_pred EEEEeCCCCCceeEEEEEeeCC
Confidence 8888877777888888888543
|
| >d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=99.47 E-value=1e-13 Score=123.93 Aligned_cols=97 Identities=16% Similarity=0.236 Sum_probs=90.3
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHH
Q 012506 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAA 150 (462)
Q Consensus 71 ~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~ 150 (462)
++.+..+|+.+|++++|+++|++++|||.|++++..++.. .+..+..++..+|. ++++++++.+|++++++|..|..
T Consensus 45 ~~e~~~~ma~~Aa~~aL~~agi~~~dIdlli~~s~t~~~~-~p~~a~~v~~~Lg~--~~~~~di~~~C~g~~~al~~a~~ 121 (172)
T d1ub7a1 45 EDEYTSDLAFKAVEDLLRRHPGALEGVDAVIVATNTPDAL-FPDTAALVQARFGL--KAFAYDLLAGCPGWIYALAQAHA 121 (172)
T ss_dssp TTCCHHHHHHHHHHHHHHHSTTTTTTEEEEEEECSSCSEE-ESCHHHHHHHHTTC--CCEEEEEECSTTHHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHHhhcCcccccceEEEEeccccccc-ccchHHHHHHHhcc--CccceeehhccccHHHHHHHHhh
Confidence 5788999999999999999999999999999999888765 67788899999996 57999999999999999999999
Q ss_pred HHHccCCCEEEEEeecCCCC
Q 012506 151 AIKAGFYDIGIGAGLESMTV 170 (462)
Q Consensus 151 ~I~sG~~d~vLv~G~E~ms~ 170 (462)
+|++|.++.+|+++.|.+|.
T Consensus 122 ~~~~~~~~~~Lvv~~e~~S~ 141 (172)
T d1ub7a1 122 LVEAGLAQKVLAVGAEALSK 141 (172)
T ss_dssp HHHTTSCSEEEEEEEECGGG
T ss_pred hhhcCCcceeEEeccccccc
Confidence 99999999999999999876
|
| >d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Probab=99.47 E-value=8.4e-14 Score=131.63 Aligned_cols=95 Identities=21% Similarity=0.284 Sum_probs=78.3
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccC----cEEEEeccCCCCc-------------------------cccHHHHHHHHcC
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGSQ-------------------------RASECRMAAFYAG 124 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~~Id----~vivG~~~~~~~~-------------------------~~~~a~~~a~~~G 124 (462)
....|+..++.+||+++|+++++++ ++++|+..+.... ....+..++..+|
T Consensus 70 ~~~~~~l~aa~~Al~dAGl~~~~~~~~~~gv~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~~g 149 (249)
T d1j3na1 70 RFVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYG 149 (249)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCChhHcCCccEEEEEEECCCcccccccccccccccCccccChhhhccccchhhhhhhHhhcC
Confidence 3466789999999999999988776 6888875443210 0124567889999
Q ss_pred CCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCC
Q 012506 125 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTV 170 (462)
Q Consensus 125 lp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~ 170 (462)
+ ..|.++++++|+|+++||..|++.|++|++|++||+|+|....
T Consensus 150 l--~Gp~~tv~~aCaSsl~Ai~~A~~~i~~G~~d~alvgg~d~~~~ 193 (249)
T d1j3na1 150 F--TGPSSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAIT 193 (249)
T ss_dssp C--CSCBCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS
T ss_pred C--CCCccccccccchHHHHHHHHHHHHHcCCCCeeeecchHhhhC
Confidence 9 6899999999999999999999999999999999999998643
|
| >d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Probab=99.45 E-value=1.4e-13 Score=130.10 Aligned_cols=94 Identities=13% Similarity=0.126 Sum_probs=76.6
Q ss_pred HHHHHHHHHHHHHHHcCCCccccC----cEEEEeccCCCCc-------------------------cccHHHHHHHHcCC
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGSQ-------------------------RASECRMAAFYAGF 125 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id----~vivG~~~~~~~~-------------------------~~~~a~~~a~~~Gl 125 (462)
...|+..++.+||+++|+++++.+ ++++|+....... ....+..++..+|+
T Consensus 72 ~~~~~l~aa~~Al~dAg~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl 151 (250)
T d2gfva1 72 FIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGL 151 (250)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhcCCCccccCccceEEEEeeccCCcchhhhhHHHHhhccccccccchhhhhhhhHHHHHHHHHhCC
Confidence 467889999999999999887766 3677765433200 01246678999999
Q ss_pred CCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCC
Q 012506 126 PETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTV 170 (462)
Q Consensus 126 p~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~ 170 (462)
++|+++|+++|+|+++||..|++.|++|++|++||+|+|....
T Consensus 152 --~Gp~~tv~~aCaSg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~ 194 (250)
T d2gfva1 152 --RGPSISIATAQTSGVHNIGHAARIIAYGDADVMVAGGAEKAST 194 (250)
T ss_dssp --CSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS
T ss_pred --CCCccccccccchhhhhhHHHHHHHHcCCcchhhcccchhhcC
Confidence 6899999999999999999999999999999999999997543
|
| >d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Probab=99.33 E-value=2.2e-12 Score=121.24 Aligned_cols=93 Identities=16% Similarity=0.223 Sum_probs=75.4
Q ss_pred HHHHHHHHHHHHHHHcCCCccccC----cEEEEeccCCCCc-------------------------cccHHHHHHHHcCC
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGSQ-------------------------RASECRMAAFYAGF 125 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id----~vivG~~~~~~~~-------------------------~~~~a~~~a~~~Gl 125 (462)
...++..++.+||+++|++++.+. .+++|+....... ....+..++..+|+
T Consensus 72 ~~~~~~~a~~~Al~~Agl~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 151 (250)
T d1e5ma1 72 FCHFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGA 151 (250)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCChHhhcCCcceEEEEEeeccccchhhhhHHHhhcCccccCcccchhhhcchhhhhHHHhccC
Confidence 356889999999999999887664 4777764332110 01246678888999
Q ss_pred CCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCC
Q 012506 126 PETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMT 169 (462)
Q Consensus 126 p~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms 169 (462)
++|.++++++|+|+++||..|+++|++|++|.+||+|+|...
T Consensus 152 --~Gp~~tv~~ACsS~l~Ai~~A~~~i~~G~~d~~lvGg~~~~~ 193 (250)
T d1e5ma1 152 --KGPNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAI 193 (250)
T ss_dssp --CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCC
T ss_pred --CCCCccccccchhhhhhhHHHhhcccCCcccccccccchhhc
Confidence 789999999999999999999999999999999999999853
|
| >d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.17 E-value=5.5e-11 Score=108.47 Aligned_cols=95 Identities=12% Similarity=0.063 Sum_probs=86.2
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEe-cCCCchHHHHHHHHHHHH
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTV-NRQCSSGLQAVADVAAAI 152 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v-~~~CsSgl~Ai~~Aa~~I 152 (462)
...+|+.+|++++|+++|+++++||.|++++.++.. .+..+..++..+|++..++.+.+ +.+|++++++|..|..+|
T Consensus 74 ~a~~la~~Aa~~aL~~ag~~~~dId~lI~~s~t~~~--~P~~aa~v~~~lg~~~~~~~~~i~~~gC~g~~~al~~A~~~l 151 (200)
T d1u0ma1 74 EAKSRVPAVIQRALDDAELLATDIDVIIYVSCTGFM--MPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHDFC 151 (200)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSSCC--SSCHHHHHHHHTTCCTTCEEEEECSCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCChhhhheEEEeccCCCC--cchhHHHHHHHHhcCCCeeEeccccchhhHHHHHHHHHHHHH
Confidence 467899999999999999999999999998876543 57788899999999777888888 579999999999999999
Q ss_pred HccCCCEEEEEeecCCCC
Q 012506 153 KAGFYDIGIGAGLESMTV 170 (462)
Q Consensus 153 ~sG~~d~vLv~G~E~ms~ 170 (462)
++|.++.||+++.|.+|.
T Consensus 152 ~~~~~~~vLvv~~e~~S~ 169 (200)
T d1u0ma1 152 TAYPEANALIVACEFCSL 169 (200)
T ss_dssp HHSTTCEEEEEEEEEGGG
T ss_pred HhCCCCEEEEEEEecccc
Confidence 999999999999999886
|
| >d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Probab=99.17 E-value=8e-11 Score=110.51 Aligned_cols=94 Identities=12% Similarity=0.148 Sum_probs=73.4
Q ss_pred HHHHHHHHHHHHHHHcCCCccccC-----cEEEEeccCCCC------------c--------------cccHHHHHHHHc
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVG-----DIVVGTVLAPGS------------Q--------------RASECRMAAFYA 123 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id-----~vivG~~~~~~~------------~--------------~~~~a~~~a~~~ 123 (462)
...+...++.++++++++..+..+ ++++|+..+... . ....+..++..+
T Consensus 71 ~~~~~~~~~~~a~~~~~l~~~~~~~~~r~g~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~ 150 (253)
T d2vbaa1 71 ASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPF 150 (253)
T ss_dssp HHHHHHHHHHHHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTTT
T ss_pred hhhhhhHHHHHHHHHhhccchhccCCCCEEEEeccccccccccccccccccccCCccccCchhhhccccccccceecccc
Confidence 455788899999999998754321 466665543211 0 112456788889
Q ss_pred CCCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCC
Q 012506 124 GFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTV 170 (462)
Q Consensus 124 Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~ 170 (462)
|+ ++|.+++.++|+|+++||..|++.|++|++|++||+|+|.++.
T Consensus 151 g~--~Gp~~~i~taCaSsl~Ai~~A~~~i~~G~~d~alvgg~~~~~~ 195 (253)
T d2vbaa1 151 KI--HGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCW 195 (253)
T ss_dssp TC--CSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCH
T ss_pred Cc--ccceeeeeccchhHHHHHHHHHHhcchhccceeeecchhhhhc
Confidence 99 7999999999999999999999999999999999999998643
|
| >d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.11 E-value=2.2e-10 Score=100.39 Aligned_cols=123 Identities=19% Similarity=0.221 Sum_probs=95.1
Q ss_pred CceEEEEEEEEecc-----CCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCCHHH----HHHHHH-HcCCCCCCCCC
Q 012506 315 PILGVFRTFAAVGV-----DPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ----FVYCRN-KLGLDPEKINV 384 (462)
Q Consensus 315 ~~~~~i~g~~~~~~-----~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~----~~~~~e-~LGl~~~~vn~ 384 (462)
+|+++|+|++.... .|+.-+.+...+++++|+++|++++|||++|.|.+.+.. +...++ .+| +++.+
T Consensus 1 tIyaei~G~~~~~Dg~~~~~p~p~g~~~~~~~~~al~~a~l~p~~i~~v~aHgtgT~~~D~~E~~ai~~~fg---~~~~v 77 (158)
T d1ox0a2 1 TILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTSTPANEKGESGAIVAVLG---KEVPV 77 (158)
T ss_dssp CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCCEECCCCSCHHHHHHHHHHHHHHHC---SSSEE
T ss_pred CEEEEEEEEEEcCCCCCCcCCCCCHHHHHHHHHHhhccccccceeeeEEeeeccccccchhHHHHHHHHhcC---CcccC
Confidence 47899999998753 344445556789999999999999999999999998864 444444 344 33444
Q ss_pred CCCccccCCccchHHHHHHHHHHHHHHhcC-------------------------CCCcEEEEEeecccceeEEEEEEec
Q 012506 385 NGGALAIGHPLGTTGARCVATLLHEMKRRG-------------------------RDCRFGVISMCIGTGMGAAAVFERG 439 (462)
Q Consensus 385 ~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~-------------------------~~~~~gl~~~~~G~G~g~A~v~~~~ 439 (462)
+.-+..+||+++++|+.+++.++..|+... .+.++.+++.++.||.+.++||++.
T Consensus 78 ~s~Ks~iGH~~~asG~~~l~~~l~~l~~g~iPp~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~nsfGfGG~Na~lvl~~~ 157 (158)
T d1ox0a2 78 SSTKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEVSDYIEANVVYGQGLEKEIPYAISNTFGFGGHNAVLAFKRW 157 (158)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBSSCCSBCTTCCSEECBSSCEECCCSEEEEEEEETTTEEEEEEEECC
T ss_pred cCcccccccchhhhhhhhhcccccccccceeccccCCCCCCcccCcccccCccccCCCCEEEEeCcCCCcEeEEEEEEec
Confidence 444555999999999999999999999762 0237888888788889999999875
Q ss_pred c
Q 012506 440 D 440 (462)
Q Consensus 440 ~ 440 (462)
+
T Consensus 158 ~ 158 (158)
T d1ox0a2 158 E 158 (158)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Probab=99.07 E-value=3e-10 Score=107.02 Aligned_cols=54 Identities=22% Similarity=0.359 Sum_probs=49.9
Q ss_pred HHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCCC
Q 012506 115 ECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTV 170 (462)
Q Consensus 115 ~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms~ 170 (462)
.+..++..+|+ ++|.++|+++|+|++.||.+|+++|++|++|++||+|+|....
T Consensus 158 ~a~~is~~~~l--~Gp~~~v~~aCaSsl~Ai~~A~~~l~~G~~d~aivgg~~~~~~ 211 (270)
T d2ix4a1 158 ASGHVSMKYGF--QGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSID 211 (270)
T ss_dssp HHHHHHHHHTC--CSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS
T ss_pred hHHHHHHHhCC--CCCCcccccccchhhHHHHHHHHHHHcCCCCeeccccchhhhh
Confidence 56788899999 6899999999999999999999999999999999999998643
|
| >d1e5ma2 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Probab=99.05 E-value=4.3e-10 Score=98.84 Aligned_cols=125 Identities=18% Similarity=0.185 Sum_probs=95.3
Q ss_pred CceEEEEEEEEecc-----CCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCCHHH----HHHHHHH-cCCCCCCCCC
Q 012506 315 PILGVFRTFAAVGV-----DPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ----FVYCRNK-LGLDPEKINV 384 (462)
Q Consensus 315 ~~~~~i~g~~~~~~-----~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~----~~~~~e~-LGl~~~~vn~ 384 (462)
+|+++|.|++.+.. .|...+.+...+++++|+++|++++|||++|.|...+.. |..+++. +|-..+++.+
T Consensus 1 rIya~i~G~~~~~Dg~~~~~~~p~g~~~~~~i~~Al~~a~i~~~~i~~v~~HgtGT~~~D~~E~~al~~vf~~~~~~~~v 80 (161)
T d1e5ma2 1 KIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPANDVTETRAIKQALGNHAYNIAV 80 (161)
T ss_dssp CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGGSEE
T ss_pred CEEEEEeeEEEeCCCCCCCCCCcCHHHHHHHHHHHHHHcCCChhhcceEEEeccCCcccchHHhhhhhhccccCCCcceE
Confidence 57899999998753 233344556789999999999999999999999988864 4444444 4433334444
Q ss_pred CCCccccCCccchHHHHHHHHHHHHHHhcC-------------------------CCCcEEEEEeecccceeEEEEEEec
Q 012506 385 NGGALAIGHPLGTTGARCVATLLHEMKRRG-------------------------RDCRFGVISMCIGTGMGAAAVFERG 439 (462)
Q Consensus 385 ~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~-------------------------~~~~~gl~~~~~G~G~g~A~v~~~~ 439 (462)
+.-+..+||+.+|+|+.+++.++..|+... ...++++++..+.||.+.++||++.
T Consensus 81 ~s~K~~~GH~~~AsG~~~l~~~l~~~~~g~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~nsfGfGG~Na~lvl~~y 160 (161)
T d1e5ma2 81 SSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENPDPECDLDYVPGQSRALIVDVALSNSFGFGGHNVTLAFKKY 160 (161)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCSCCCBSSCEECCCSEEEEEEEETTTEEEEEEEECC
T ss_pred EecccccccccccchhhHHHHhHHhcccCeeCCccCCCCCCCCCCcccCcCcccCCCCCEEEEeCcCcCcEeEEEEEeee
Confidence 444556999999999999999999999762 0247888888777788899998864
|
| >d2gfva2 c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Probab=99.03 E-value=7.2e-10 Score=97.38 Aligned_cols=124 Identities=17% Similarity=0.261 Sum_probs=94.4
Q ss_pred CceEEEEEEEEecc-----CCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCCHHH----HHHHHH-HcCCCCCCCCC
Q 012506 315 PILGVFRTFAAVGV-----DPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ----FVYCRN-KLGLDPEKINV 384 (462)
Q Consensus 315 ~~~~~i~g~~~~~~-----~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~----~~~~~e-~LGl~~~~vn~ 384 (462)
++|++|.|++.+.. .|...+.+...+++++|+++|++++||||+|.|..-+.. |..+++ .++-..+++.+
T Consensus 1 rIya~I~G~~~~~Dg~~~~~~~p~g~~~~~~~~~al~~a~i~p~~i~~ie~HgtGT~~gD~~E~~Al~~~f~~~~~~~~i 80 (161)
T d2gfva2 1 KIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLV 80 (161)
T ss_dssp CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGTTSEE
T ss_pred CEEEEEeeEEEeCCCCCCCCCCCCHHHHHHHHHHhHhhcccCcceEEEEEeecccCcccHHHHHHHHHHHhcccccccee
Confidence 57899999998753 233334455789999999999999999999999988864 444443 34544344444
Q ss_pred CCCccccCCccchHHHHHHHHHHHHHHhcC--------------------------CCCcEEEEEeecccceeEEEEEEe
Q 012506 385 NGGALAIGHPLGTTGARCVATLLHEMKRRG--------------------------RDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 385 ~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~--------------------------~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
+.-+..+||..+|+|+.+++.++..|+.+. .+.++++++.+..||.+.++||++
T Consensus 81 ~s~Ks~~GH~~~AsG~~~li~~ll~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~vnsfGfgG~Na~lil~~ 160 (161)
T d2gfva2 81 SSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFKK 160 (161)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHSCEECCBTTCSSBCTTCCSBCCBSSCEECSSCCEEEEEEEEGGGEEEEEEEEC
T ss_pred ccccccccccHHHHHHHHHHHHHHHhcCCEecccccccccccccccccccccCccCCCCcEEEEeCcCccceeEEEEEEE
Confidence 444556999999999999999999999651 123788888777888999999885
|
| >d1j3na2 c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Probab=99.01 E-value=4.9e-10 Score=98.25 Aligned_cols=124 Identities=20% Similarity=0.295 Sum_probs=94.2
Q ss_pred CceEEEEEEEEecc-----CCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCCHHH----HHHHHHH-cCCCCCCCCC
Q 012506 315 PILGVFRTFAAVGV-----DPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ----FVYCRNK-LGLDPEKINV 384 (462)
Q Consensus 315 ~~~~~i~g~~~~~~-----~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~----~~~~~e~-LGl~~~~vn~ 384 (462)
+++++|.|++.+.. .|+..+.+...+++++|+++|++++|||++|.|..-+.. |...+++ ++-...++.+
T Consensus 1 rIya~I~G~~~~~Dg~~~~~~~p~g~~~~~~~~~al~~agi~p~~I~~ie~HgtGT~~gD~~E~~Al~~~f~~~~~~~~i 80 (159)
T d1j3na2 1 RIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGTSTPVGDRAEVLAIKRVFGDHAKRLMV 80 (159)
T ss_dssp CCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHHHHHTTCEE
T ss_pred CEEEEEeEEEEeCCCCCCCCCCcCHHHHHHHhhccHhhcCCCHHHcCeEeccccCCccchHHHHHHHHHHHHhcCCCceE
Confidence 47899999998753 344445566789999999999999999999999988864 3333332 3222233444
Q ss_pred CCCccccCCccchHHHHHHHHHHHHHHhcC------------------------CCCcEEEEEeecccceeEEEEEEe
Q 012506 385 NGGALAIGHPLGTTGARCVATLLHEMKRRG------------------------RDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 385 ~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~------------------------~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
..-+..+||..+++|+.+++.++..|+.+. .+.++++++.++.||.+.++||++
T Consensus 81 ~s~K~~~GH~~~asG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~a~v~sfGfgG~Na~~vl~k 158 (159)
T d1j3na2 81 SSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLEDPDPELDLDFVPEPREAKVDYALSNSFAFGGHNAVLAFKR 158 (159)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTTTSBCTTSCSBCCSSCEECCCSEEEEEEECTTSEEEEEEEEC
T ss_pred ecccccccccccccccchhhhhhhHhhCCEeccccccccccceeeeeccCcccCCCCCEEEEeCCCCCceeEEEEEEE
Confidence 444556999999999999999999998762 134788888888888999999986
|
| >d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=98.99 E-value=1.1e-09 Score=102.01 Aligned_cols=95 Identities=12% Similarity=-0.029 Sum_probs=80.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEE-ecCCCchHHHHHHHHHHHH
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRT-VNRQCSSGLQAVADVAAAI 152 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~-v~~~CsSgl~Ai~~Aa~~I 152 (462)
+..+|+.+|++++|+++|+++++||.||+++.++... +.....+...+|+..++..+. ++.+|++++++|..|..+|
T Consensus 101 ~~~~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~~~~--p~~~a~~~~~l~~~~~~~~~~~~~~~C~g~~~al~~A~~~i 178 (235)
T d1bi5a1 101 EVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDM--PGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLA 178 (235)
T ss_dssp HHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCCS--SCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCChhHCcEEEEecccCCcc--CccHHHHHHHHhcCCCceEEeeecCccchHHHHHHHHHHHH
Confidence 4568999999999999999999999999999887653 334555666666655555554 5889999999999999999
Q ss_pred HccCCCEEEEEeecCCCC
Q 012506 153 KAGFYDIGIGAGLESMTV 170 (462)
Q Consensus 153 ~sG~~d~vLv~G~E~ms~ 170 (462)
++|.++.||++++|.+|.
T Consensus 179 ~~~~~~~vLvV~~E~~S~ 196 (235)
T d1bi5a1 179 ENNKGARVLVVCSEVTAV 196 (235)
T ss_dssp HTSTTCEEEEEEEECGGG
T ss_pred HcCCCCeEEEEEeeecce
Confidence 999999999999999876
|
| >d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS species: Staphylococcus aureus [TaxId: 1280]
Probab=98.93 E-value=5.4e-10 Score=98.62 Aligned_cols=97 Identities=11% Similarity=0.077 Sum_probs=88.1
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEecCCCchHHHHHHHHHH
Q 012506 71 KDTYPDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAA 150 (462)
Q Consensus 71 ~d~~~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~ 150 (462)
++++..+|+.+|++++|++. ++++||.+++++..++.. .+..+..++..+|++....+++++.+|+++++||..|..
T Consensus 46 ~~E~~~~ma~~Aa~~al~~~--~~~~id~li~~t~~~~~~-~p~~a~~v~~~lg~~~~~~~~dv~~~C~g~~~al~~A~~ 122 (166)
T d1xpma1 46 VNQDIVSMGANAAKDIITDE--DKKKIGMVIVATESAVDA-AKAAAVQIHNLLGIQPFARCFEMKEACYAATPAIQLAKD 122 (166)
T ss_dssp TTCCHHHHHHHHHHTTCCHH--HHHHEEEEEEECSSCSBS-SSCHHHHHHHHTTCCSSCEEEEEESTTTTHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHhhhccc--cCCCCCeEEEeccccccc-cchhHHHHHHhhccccceEEeeecccHHHHHHHHHHHhh
Confidence 57899999999999999876 478999999999888775 678899999999997789999999999999999999999
Q ss_pred HHHccCCCEEEEEeecCCCC
Q 012506 151 AIKAGFYDIGIGAGLESMTV 170 (462)
Q Consensus 151 ~I~sG~~d~vLv~G~E~ms~ 170 (462)
+|++|..+.+|+++.|..+.
T Consensus 123 ~i~~~~~~~alvV~sd~~~~ 142 (166)
T d1xpma1 123 YLATRPNEKVLVIATDTARY 142 (166)
T ss_dssp HHTTCTTCEEEEEEEEEECC
T ss_pred HHhcCCCCeEEEEEEceEec
Confidence 99999999999999997654
|
| >d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Probab=98.88 E-value=3.2e-09 Score=96.49 Aligned_cols=91 Identities=15% Similarity=0.259 Sum_probs=75.4
Q ss_pred HHHHHHHHHHHHHHHcCCCccccC----cEEEEeccCCCC-----------c--------------cccHHHHHHHHcCC
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVG----DIVVGTVLAPGS-----------Q--------------RASECRMAAFYAGF 125 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id----~vivG~~~~~~~-----------~--------------~~~~a~~~a~~~Gl 125 (462)
...|+..++.+||+++|+++++++ .+++|+..+... . ....+..++..+|+
T Consensus 70 ~~~~~~~a~~~Al~~Ag~~~~~~~~~~~g~~~g~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl 149 (208)
T d1tqyb1 70 STRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGM 149 (208)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHTC
T ss_pred ccccccccccccchhhhcccccccccccccccccccccccccchhhhhhccccccccccccccccccccccchhhhcccc
Confidence 356888999999999999988876 477777544321 0 01246678999999
Q ss_pred CCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCC
Q 012506 126 PETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESM 168 (462)
Q Consensus 126 p~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~m 168 (462)
++|.++++++|+|++.||..|+++|++| +|++||+|+|.+
T Consensus 150 --~Gp~~tv~tACaS~l~Ai~~A~~~I~~G-~d~~lvGG~d~~ 189 (208)
T d1tqyb1 150 --RGPSSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSA 189 (208)
T ss_dssp --CSSCEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECC
T ss_pred --cceeeeccccccHHHHHHHHHHHHHHcC-CCEEEECccccc
Confidence 6899999999999999999999999999 899999999984
|
| >d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Probab=98.87 E-value=2.8e-09 Score=97.44 Aligned_cols=94 Identities=19% Similarity=0.352 Sum_probs=75.8
Q ss_pred CHHHHHHHHHHHHHHHcCCCccccCc----EEEEeccCCCCc-------------------------------cccHHHH
Q 012506 74 YPDDLLAPVLKAVIEKTNVDPSEVGD----IVVGTVLAPGSQ-------------------------------RASECRM 118 (462)
Q Consensus 74 ~~~eL~~~A~~~Al~~agl~~~~Id~----vivG~~~~~~~~-------------------------------~~~~a~~ 118 (462)
....|+..++++||+++|+++++++. +++++..+.... ....+..
T Consensus 70 ~~~~~~l~aa~~Al~dAg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 149 (216)
T d1tqya1 70 RASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAE 149 (216)
T ss_dssp HHHHHHHHHHHHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHH
T ss_pred cchhhHHHHHHHHHHHhcCCccccccccccccccccccccchhhHHHhhhhhcccccccchhhcccccccccCchHHHHH
Confidence 45778999999999999999877653 555543322100 0124677
Q ss_pred HHHHcCCCCCcceEEecCCCchHHHHHHHHHHHHHccCCCEEEEEeecCCC
Q 012506 119 AAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMT 169 (462)
Q Consensus 119 ~a~~~Glp~~~p~~~v~~~CsSgl~Ai~~Aa~~I~sG~~d~vLv~G~E~ms 169 (462)
++..+|+ ++|.+++..+|+|+++||.+|+.+|++|++|++||+|+|.+.
T Consensus 150 ia~~~g~--~Gp~~tv~~ACaS~~~Ai~~A~~~i~~G~~d~~ivGG~d~~l 198 (216)
T d1tqya1 150 VAWAVGA--EGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPI 198 (216)
T ss_dssp HHHHHTC--CSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCC
T ss_pred HHHhcCc--cccceeeccccchHHHHHHHHHHHHHcCCCCEEEEeeecccc
Confidence 8889999 689999999999999999999999999999999999999853
|
| >d2ix4a2 c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Probab=98.87 E-value=5.7e-09 Score=91.48 Aligned_cols=122 Identities=17% Similarity=0.188 Sum_probs=92.0
Q ss_pred eEEEEEEEEec-----cCCCCCCccHHHHHHHHHHHcCCCCCCccEEEecCCCHHH----HHHHHH-HcCCC--CCCCCC
Q 012506 317 LGVFRTFAAVG-----VDPAIMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ----FVYCRN-KLGLD--PEKINV 384 (462)
Q Consensus 317 ~~~i~g~~~~~-----~~p~~~~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~----~~~~~e-~LGl~--~~~vn~ 384 (462)
|++|.|++.+. ..|+..+.+...+++++|+++|++++||||+|.|...+.. |...++ .++-. ..++.+
T Consensus 1 Y~~i~G~~~~~Dg~~~t~p~~~g~~~~~~~~~al~~a~~~~~di~yveaHGtGT~~gD~~E~~al~~~~~~~~~~~~~~i 80 (161)
T d2ix4a2 1 YAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAF 80 (161)
T ss_dssp CEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHTHHHHTSCSEE
T ss_pred CeEEEEEEEcCCCCCCcCCChhHHHHHHHHHHHHHhcCCCccccCEEEEeccCCCCCcHHHHhhhHhhhcccccccceee
Confidence 57899999875 2455444455678999999999999999999999988865 343333 33321 123444
Q ss_pred CCCccccCCccchHHHHHHHHHHHHHHhcC--------------------------CCCcEEEEEeecccceeEEEEEEe
Q 012506 385 NGGALAIGHPLGTTGARCVATLLHEMKRRG--------------------------RDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 385 ~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~--------------------------~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
+.-+..+||+.+++|+.+++.++.+|+.+. ...++++++.+..||.+.++||+.
T Consensus 81 ~s~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~nsfGfgG~Na~lvl~~ 160 (161)
T d2ix4a2 81 SSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPIFDKRFMPLTTSKKMLVRTAMSNSFGFGGTNASLLFAS 160 (161)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCTTCCSSSCCCSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred eccccccCCccchHHHHHHHHHHHHHhcCCCCCccCCCCCCcccCcccCccccCCCCCcCEEEEeCCcccceeEEEEEEe
Confidence 444566999999999999999999999762 024789998888888999999874
|
| >d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.67 E-value=4e-08 Score=84.73 Aligned_cols=97 Identities=22% Similarity=0.236 Sum_probs=74.6
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDC 417 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~ 417 (462)
..+++++|+++|++++|||+|.+|+++..+....+++||++++++..+ -.--+||..+|+-...+.+++.+-+-+.+
T Consensus 51 ~~~i~~~L~~~gl~~~dId~~i~Hqa~~~i~~~v~~~lgl~~ek~~~~-~~~~~GNt~sasip~~L~~a~~~g~i~~G-- 127 (148)
T d1u6ea2 51 GDVGRRAMDAAGVRPDQIDVFVPHQANSRINELLVKNLQLRPDAVVAN-DIEHTGNTSAASIPLAMAELLTTGAAKPG-- 127 (148)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEECCSCHHHHHHHHHHHTCCTTCEECC-THHHHCBCGGGHHHHHHHHHHHHTSSCTT--
T ss_pred HHHHHHHHHHcCCCcccccEEEeccccHHHHHHHHHhcCCCchhhhhh-hHHhhCCCccchHHHHHHHHHHcCCCCCC--
Confidence 468999999999999999999999999999999999999999886654 13347999999877777777665333334
Q ss_pred cEEEEEeecccceeEEEEEEe
Q 012506 418 RFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 418 ~~gl~~~~~G~G~g~A~v~~~ 438 (462)
++.+... .|.|+..+.++.|
T Consensus 128 d~vll~g-fG~G~s~~a~llr 147 (148)
T d1u6ea2 128 DLALLIG-YGAGLSYAAQVVR 147 (148)
T ss_dssp CEEEEEE-EETTTEEEEEEEE
T ss_pred CEEEEEE-EchhhhheEEEEe
Confidence 5665544 5677777555543
|
| >d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=98.54 E-value=1.3e-07 Score=81.40 Aligned_cols=96 Identities=24% Similarity=0.259 Sum_probs=72.8
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDC 417 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~ 417 (462)
..+++++|+++|++++|||+|-+|+++..+...+.++||++++++..+ .--+||..+++-...+.+++.+-+-+.+
T Consensus 50 p~~i~~~L~~~g~~~~dId~~i~Hqa~~~~~~~i~~~lgi~~~k~~~~--~~~~Gn~~sasip~~L~~~~~~~~~~~G-- 125 (149)
T d1ub7a2 50 NTATLEAIEKAGLTPEDIRLFVPHQANLRIIDAARERLGLPWERVAVN--VDRYGNTSTASIPLALKEAVDAGRIREG-- 125 (149)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEECCSCHHHHHHHHHTTTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHHTSSCTT--
T ss_pred HHHHHHHHHhhccccccccEEEeeccchHHHHHHHhhccchhhHHHHH--HHHhcCCcchhHHHHHHHHHHcCCCCCC--
Confidence 468899999999999999999999999999999999999999987765 3348999888866666655554333334
Q ss_pred cEEEEEeecccceeEEEEEEe
Q 012506 418 RFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 418 ~~gl~~~~~G~G~g~A~v~~~ 438 (462)
++.|... .|.|+..+.++.+
T Consensus 126 d~vll~g-~G~G~s~ga~llr 145 (149)
T d1ub7a2 126 DHVLLVS-FGAGLTWAAAVLT 145 (149)
T ss_dssp CEEEEEE-EETTTEEEEEEEE
T ss_pred CEEEEEE-EchHhhhEEEEEE
Confidence 4555543 5666666555444
|
| >d2vbaa2 c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Probab=98.45 E-value=6.3e-07 Score=77.25 Aligned_cols=117 Identities=15% Similarity=0.130 Sum_probs=85.7
Q ss_pred eEEEEEEEEeccCCC---CCCccHHHHHHHHHHHcCCCCCCccEEEecCCCHHH----HHHHHH-HcCCCCCCCCCCCCc
Q 012506 317 LGVFRTFAAVGVDPA---IMGVGPAVAIPAAVKSAGLQLDDIDLFEINEAFASQ----FVYCRN-KLGLDPEKINVNGGA 388 (462)
Q Consensus 317 ~~~i~g~~~~~~~p~---~~~~~~~~Ai~~aL~~AGl~~~DID~~eihdafa~~----~~~~~e-~LGl~~~~vn~~GG~ 388 (462)
|++|.|++.+..... ..+.+...+++++|+.+ ++|||++|.|..-+.. |...++ .+|-...+|+.. +
T Consensus 1 Yaei~G~g~~~Dg~~~taP~~~~~~~~~~~al~~a---~~~I~~v~aHgtGT~~gD~~E~~Al~~vfg~~~~~v~s~--K 75 (151)
T d2vbaa2 1 YAEIVGYGATSDGADMVAPSGEGAVRCMKMAMHGV---DTPIDYLNSHGTSTPVGDVKELAAIREVFGDKSPAISAT--K 75 (151)
T ss_dssp CEEEEEEEEEECCSCTTSCCSHHHHHHHHHHHTTC---CSCCCEEECCCCSCHHHHHHHHHHHHHHHTTCCCEEECT--H
T ss_pred CEEEEEEEEecCCCCCCCcCHHHHHHHHHHhhhcC---cccceeEEEeccCCccccHHHHHHHHHHhCCCCcccccc--h
Confidence 578999998753221 12345578899999876 6799999999988864 444443 456444344433 4
Q ss_pred cccCCccchHHHHHHHHHHHHHHhcC-------------------------CCCcEEEEEeecccceeEEEEEEe
Q 012506 389 LAIGHPLGTTGARCVATLLHEMKRRG-------------------------RDCRFGVISMCIGTGMGAAAVFER 438 (462)
Q Consensus 389 ~a~Ghp~gatG~~~~~~~~~qL~~~~-------------------------~~~~~gl~~~~~G~G~g~A~v~~~ 438 (462)
..+||+.+++|+.+++.++..|+.+. ...++.+++.+..||.+.++||++
T Consensus 76 ~~~GH~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~a~~nsfGfGG~Na~~vl~~ 150 (151)
T d2vbaa2 76 AMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLNIVTETTDRELTTVMSNSFGFGGTNATLVMRK 150 (151)
T ss_dssp HHHCBCGGGHHHHHHHHHHHHHHHTEECCCCCCSSBCTTCTTSEECCSCEECCCCEEEEEEEETTTEEEEEEEEC
T ss_pred hhccccccchhhhhhhHHHHHHHcCCcccccCccccccccccccccCcCcCCCCCEEEEeCCcccceeEEEEEEE
Confidence 55999999999999999999998751 024788888888888999999986
|
| >d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=98.43 E-value=3.6e-07 Score=78.11 Aligned_cols=95 Identities=12% Similarity=0.167 Sum_probs=72.0
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDC 417 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~ 417 (462)
..+++++|+++|++++|||+|-+|+++..+...+.+.||++++++..+ .--+||...|+-...+.+++.+-+-+.+
T Consensus 47 ~~~i~~~L~~~g~~~~dId~~i~Hq~~~~~~~~~~~~l~l~~~k~~~~--~~~~GN~~sasip~~L~~~~~~~~~~~G-- 122 (143)
T d1hnja2 47 AHIVDETLAANNLDRSQLDWLVPHQANLRIISATAKKLGMSMDNVVVT--LDRHGNTSAASVPCALDEAVRDGRIKPG-- 122 (143)
T ss_dssp HHHHHHHHHHTTCCGGGCCEEEECCSCHHHHHHHHHHTTCCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHTTCSCTT--
T ss_pred hHHHHHHHHHhhhcccccceEEeccCchHHHHHHHHhCccchhhhhhh--hhhhcccccchHHHHHHHHHHhCCCCCC--
Confidence 468899999999999999999999999999999999999999987765 4458999888866666555554322333
Q ss_pred cEEEEEeecccceeEEEEEE
Q 012506 418 RFGVISMCIGTGMGAAAVFE 437 (462)
Q Consensus 418 ~~gl~~~~~G~G~g~A~v~~ 437 (462)
++.+... .|.|+..+.++.
T Consensus 123 d~vll~g-~G~G~s~g~~ll 141 (143)
T d1hnja2 123 QLVLLEA-FGGGFTWGSALV 141 (143)
T ss_dssp CEEEEEE-EETTTEEEEEEE
T ss_pred CEEEEEE-EehhhhhEEEEE
Confidence 4555544 566777655443
|
| >d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=98.33 E-value=1e-06 Score=76.08 Aligned_cols=91 Identities=19% Similarity=0.197 Sum_probs=64.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhcCCCC
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRRGRDC 417 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~~~~~ 417 (462)
..+++++|+++|++++|||+|-+|+++..+.....++||++++++-++ -.--+||+.+||-...+.+++.+-+-+.+
T Consensus 51 p~~i~~~L~~~gl~~~dId~~i~Hq~~~~~~~~v~~~lgi~~ek~~~~-~~~~~GNt~Sasip~~L~~~~~~~~~~~G-- 127 (153)
T d1mzja2 51 VPAAREALEVAGLTVGDLVAFVPHQANLRIIDVLVDRLGVPEHVVVSR-DAEDTGNTSSASVALALDRLVRSGAVPGG-- 127 (153)
T ss_dssp HHHHHHHHHTTTCCGGGCSEEEECCSCHHHHHHHHHHHTCCTTSEECC-THHHHCBCTTHHHHHHHHHHHHHTSSCTT--
T ss_pred HHHHHHHHHHhCCCcccCCEEEEcCCcHHHHHHHHHHhCCCchhcchh-hhhhcCCcccchHHHHHHHHHHcCCCCCC--
Confidence 468899999999999999999999999999999999999999885332 12237787777655555554444332333
Q ss_pred cEEEEEeecccceeE
Q 012506 418 RFGVISMCIGTGMGA 432 (462)
Q Consensus 418 ~~gl~~~~~G~G~g~ 432 (462)
++.+... .|.|+..
T Consensus 128 d~ill~~-fG~G~s~ 141 (153)
T d1mzja2 128 GPALMIG-FGAGLSY 141 (153)
T ss_dssp CEEEEEE-EETTTEE
T ss_pred CEEEEEE-Echhhhh
Confidence 4444443 5667654
|
| >d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=97.98 E-value=1.5e-06 Score=74.60 Aligned_cols=94 Identities=16% Similarity=0.234 Sum_probs=66.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCCHHHHHHHHHHcCCCCCCCCCCCC-ccccCCccchHHHHHHHHHHHHHHhcCC-
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGG-ALAIGHPLGTTGARCVATLLHEMKRRGR- 415 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~~~e~LGl~~~~vn~~GG-~~a~Ghp~gatG~~~~~~~~~qL~~~~~- 415 (462)
..+++++|+++|++++|||+|-+|+....+...+.++||++++++..+=- .--+||...||-... +.++.+++.
T Consensus 46 ~~~i~~~l~~~g~~~~did~~~~Hq~~~~i~~~i~~~Lgl~~~k~~~s~~~l~~~GN~~sasi~~~----L~~~~~~~~~ 121 (148)
T d1u0ma2 46 APALKELAGEHGWDASDLDFYIVHAGGPRILDDLSTFLEVDPHAFRFSRATLTEYGNIASAVVLDA----LRRLFDEGGV 121 (148)
T ss_dssp HHHHHHHHHTTSCCSSCCSCCEEECSHHHHHHHHHHHSCSCGGGGHHHHHHHHHTCBCTTHHHHHH----HHHHHHSCCC
T ss_pred HHHHHHHHHHhCCCHHHCCEEEECCCCHHHHHHHHHHhCCChhhhhHHHHHHHhcCCCCcchHHHH----HHHHHHcCCC
Confidence 46889999999999999999999999999999999999999998754210 122688888884443 344443321
Q ss_pred -CCcEEEEEeecccceeEEEEE
Q 012506 416 -DCRFGVISMCIGTGMGAAAVF 436 (462)
Q Consensus 416 -~~~~gl~~~~~G~G~g~A~v~ 436 (462)
..++.|... .|.|+.+.+++
T Consensus 122 ~~Gd~ill~g-fG~G~s~~~~l 142 (148)
T d1u0ma2 122 EEGARGLLAG-FGPGITAEMSL 142 (148)
T ss_dssp CSSCCCEEEE-EETTTEEEEEE
T ss_pred CCCCEEEEEE-EchHhEeeEEE
Confidence 114555543 56777765544
|
| >d1u0ua2 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {Scots pine (Pinus sylvestris) [TaxId: 3349]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Dihydropinosylvin synthase species: Scots pine (Pinus sylvestris) [TaxId: 3349]
Probab=97.69 E-value=5.9e-05 Score=64.81 Aligned_cols=101 Identities=14% Similarity=0.100 Sum_probs=75.3
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCCHHHHHHHHHHcCCCCCCCCCCCC-ccccCCccchHHHHHHHHHHHHHHhcCC-
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGG-ALAIGHPLGTTGARCVATLLHEMKRRGR- 415 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~~~e~LGl~~~~vn~~GG-~~a~Ghp~gatG~~~~~~~~~qL~~~~~- 415 (462)
...++.+|+++|++.+|||+|-+|++...+.....++|||+++++..+=- +-.+|+..+||-...+-++.++...++.
T Consensus 46 ~~~~~~~l~~~~~~~~did~~i~Hqgg~~Ild~v~~~L~L~~~k~~~s~~~l~~~GN~sSasip~~L~~~~~~~~~~~~~ 125 (156)
T d1u0ua2 46 ENCMVEAFSQFKISDWNKLFWVVHPGGRAILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGCS 125 (156)
T ss_dssp HHHHHHHHGGGTCCCGGGSEEEECCSCHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHcCCChhhCceEeecCCcHHHHHHHHHHhCCCcccchhhHHHHhhcCCCCcccHHHHHHHHHHhhhhccCC
Confidence 46788999999999999999999999999999999999999998765311 1237999999977766666655443221
Q ss_pred ----CCcEEEEEeecccceeE-EEEEEec
Q 012506 416 ----DCRFGVISMCIGTGMGA-AAVFERG 439 (462)
Q Consensus 416 ----~~~~gl~~~~~G~G~g~-A~v~~~~ 439 (462)
+.++++... .|.|+.+ +++|++.
T Consensus 126 ~~~~~~~~~~~~g-fG~Glt~~~~llr~~ 153 (156)
T d1u0ua2 126 TTGEGLEMGVLFG-FGPGLTIETVVLKSV 153 (156)
T ss_dssp BSBTTBSEEEEEE-EETTTEEEEEEEEEC
T ss_pred CcCCCCCEEEEEE-ECHHHhHHHHHHeeC
Confidence 226777765 6777776 4566553
|
| >d1ee0a2 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcone synthase 2) {Gerbera hybrid cultivar [TaxId: 18101]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Pyrone synthase (PyS, chalcone synthase 2) species: Gerbera hybrid cultivar [TaxId: 18101]
Probab=97.64 E-value=9.7e-05 Score=63.65 Aligned_cols=102 Identities=15% Similarity=0.159 Sum_probs=76.3
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCCHHHHHHHHHHcCCCCCCCCCCCC-ccccCCccchHHHHHHHHHHHHHHhcCC-
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGG-ALAIGHPLGTTGARCVATLLHEMKRRGR- 415 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~~~e~LGl~~~~vn~~GG-~~a~Ghp~gatG~~~~~~~~~qL~~~~~- 415 (462)
...++++|+++|++.+|||+|-+|.+...+...+.++|||+++++-.+=- +--+|+..++|-...+-+++.+-...++
T Consensus 50 ~~~v~~~l~~~gl~~~di~~~v~Hqgg~~Ild~i~~~L~L~~~~l~~s~~vl~~yGNtSSaSI~~vL~~~~~~~~~~~~~ 129 (160)
T d1ee0a2 50 ENAAEKALSPLGITDWNSVFWMVHPGGRAILDQVERKLNLKEDKLRASRHVLSEYGNLISACVLFIIDEVRKRSMAEGKS 129 (160)
T ss_dssp HHHHHHHHGGGTCCCGGGSEEEECCSSHHHHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHhhccCCccccceEeecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCccchHHHHHHHHHhhhhhcCCC
Confidence 46788999999999999999999999999999999999999998754211 2347999999977777777665544332
Q ss_pred ----CCcEEEEEeecccceeEEE-EEEecc
Q 012506 416 ----DCRFGVISMCIGTGMGAAA-VFERGD 440 (462)
Q Consensus 416 ----~~~~gl~~~~~G~G~g~A~-v~~~~~ 440 (462)
+.++++... .|.|+.+.. ++.+..
T Consensus 130 ~~g~~~d~~ll~a-fG~Glt~~~~llr~~~ 158 (160)
T d1ee0a2 130 TTGEGLDCGVLFG-FGPGMTVETVVLRSVR 158 (160)
T ss_dssp BTBTTBSEEEEEE-EETTTEEEEEEEEECB
T ss_pred CcCCCcCEEEEEE-EChHHHHHHHHHeecc
Confidence 125677765 677777744 555543
|
| >d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=97.58 E-value=9e-05 Score=63.47 Aligned_cols=100 Identities=17% Similarity=0.209 Sum_probs=75.1
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCCHHHHHHHHHHcCCCCCCCCCCCC-ccccCCccchHHHHHHHHHHHHHHhcCC-
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGG-ALAIGHPLGTTGARCVATLLHEMKRRGR- 415 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~~~e~LGl~~~~vn~~GG-~~a~Ghp~gatG~~~~~~~~~qL~~~~~- 415 (462)
...+.++|+++|++.+|||+|-+|.+.........++|||+++++..+=- +-.+|+..++|-...+-++.++-+..+.
T Consensus 45 ~~~~~~~l~~~gl~~~di~~~v~Hqgg~~Ild~v~~~L~L~~~~~~~s~~vl~~yGN~SSasi~~vL~~~~~~~~~~~~~ 124 (154)
T d1bi5a2 45 TKALVEAFEPLGISDYNSIFWIAHPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLK 124 (154)
T ss_dssp HHHHHHHHGGGTCCCTTSSEEEECCSSHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHcCCCccccceEeeccccHHHHHHHHHHhCCCHHHHHHhHHHHHhcCCCCcccHHHHHHHHHHhhhccCCc
Confidence 46788899999999999999999999999999999999999998765311 2237999999977777777766544321
Q ss_pred ----CCcEEEEEeecccceeEE-EEEEe
Q 012506 416 ----DCRFGVISMCIGTGMGAA-AVFER 438 (462)
Q Consensus 416 ----~~~~gl~~~~~G~G~g~A-~v~~~ 438 (462)
+.++++... .|.|+... ++|++
T Consensus 125 ~~g~~~~~~~~~a-FG~Glt~~~~llr~ 151 (154)
T d1bi5a2 125 TTGEGLEWGVLFG-FGPGLTIETVVLRS 151 (154)
T ss_dssp BTTTTCSEEEEEE-EETTTEEEEEEEEE
T ss_pred ccCCCcCEEEEEE-EchHHhHHHHHHhc
Confidence 125677654 67777764 45544
|
| >d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=93.75 E-value=0.1 Score=43.26 Aligned_cols=82 Identities=15% Similarity=0.120 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEE-----ecCCCchHHHHHHHHHH
Q 012506 76 DDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRT-----VNRQCSSGLQAVADVAA 150 (462)
Q Consensus 76 ~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~-----v~~~CsSgl~Ai~~Aa~ 150 (462)
.....++++++|+++|++++|||.+++=+. ....-..++..+|+|.....++ -|.+++|-..++..+.+
T Consensus 47 ~~~v~~~i~~~L~~~gl~~~dId~~i~Hqa------~~~i~~~v~~~lgl~~ek~~~~~~~~~GNt~sasip~~L~~a~~ 120 (148)
T d1u6ea2 47 AFKMGDVGRRAMDAAGVRPDQIDVFVPHQA------NSRINELLVKNLQLRPDAVVANDIEHTGNTSAASIPLAMAELLT 120 (148)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCEEEECCS------CHHHHHHHHHHHTCCTTCEECCTHHHHCBCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCcccccEEEeccc------cHHHHHHHHHhcCCCchhhhhhhHHhhCCCccchHHHHHHHHHH
Confidence 455577899999999999999999987322 2345667888999975433333 23344555566665544
Q ss_pred H--HHccCCCEEEEEee
Q 012506 151 A--IKAGFYDIGIGAGL 165 (462)
Q Consensus 151 ~--I~sG~~d~vLv~G~ 165 (462)
. |+. -|.++.+|+
T Consensus 121 ~g~i~~--Gd~vll~gf 135 (148)
T d1u6ea2 121 TGAAKP--GDLALLIGY 135 (148)
T ss_dssp HTSSCT--TCEEEEEEE
T ss_pred cCCCCC--CCEEEEEEE
Confidence 3 233 367777664
|
| >d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=93.70 E-value=0.16 Score=44.14 Aligned_cols=79 Identities=20% Similarity=0.265 Sum_probs=51.5
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC----CCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhc
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINE----AFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 413 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihd----afa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~ 413 (462)
..|++++|+++|++++|||++-... .......+..++||+.+.-... .+ +-.||+|...-+.....+-..
T Consensus 80 ~~Aa~~aL~~ag~~~~dId~lI~~s~t~~~~P~~aa~v~~~lg~~~~~~~~-----~i-~~~gC~g~~~al~~A~~~l~~ 153 (200)
T d1u0ma1 80 PAVIQRALDDAELLATDIDVIIYVSCTGFMMPSLTAWLINEMGFDSTTRQI-----PI-AQLGCAAGGAAINRAHDFCTA 153 (200)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEEECSSSCCSSCHHHHHHHHTTCCTTCEEE-----EE-CSCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChhhhheEEEeccCCCCcchhHHHHHHHHhcCCCeeEe-----cc-ccchhhHHHHHHHHHHHHHHh
Confidence 5799999999999999999997643 2334566778899987642111 01 224677777666666555554
Q ss_pred CCCCcEEEEE
Q 012506 414 GRDCRFGVIS 423 (462)
Q Consensus 414 ~~~~~~gl~~ 423 (462)
+.. +++|+.
T Consensus 154 ~~~-~~vLvv 162 (200)
T d1u0ma1 154 YPE-ANALIV 162 (200)
T ss_dssp STT-CEEEEE
T ss_pred CCC-CEEEEE
Confidence 332 555554
|
| >d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=93.01 E-value=0.17 Score=45.28 Aligned_cols=78 Identities=15% Similarity=0.115 Sum_probs=49.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----CHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhc
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA----FASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 413 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda----fa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~ 413 (462)
..|++++|+++|++++|||++-..-+ .........++||+.+.-... .=+-.||+|.........++-..
T Consensus 107 ~~Aa~~aL~~a~~~~~dId~lI~~t~t~~~~p~~~a~~~~~l~~~~~~~~~------~~~~~~C~g~~~al~~A~~~i~~ 180 (235)
T d1bi5a1 107 KEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRY------MMYQQGCFAGGTVLRLAKDLAEN 180 (235)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEE------EEESCCTTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCChhHCcEEEEecccCCccCccHHHHHHHHhcCCCceEE------eeecCccchHHHHHHHHHHHHHc
Confidence 57999999999999999999987532 233455667778776532111 11234677776666666666655
Q ss_pred CCCCcEEEE
Q 012506 414 GRDCRFGVI 422 (462)
Q Consensus 414 ~~~~~~gl~ 422 (462)
+.. ++.|+
T Consensus 181 ~~~-~~vLv 188 (235)
T d1bi5a1 181 NKG-ARVLV 188 (235)
T ss_dssp STT-CEEEE
T ss_pred CCC-CeEEE
Confidence 432 44444
|
| >d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=92.13 E-value=0.18 Score=41.70 Aligned_cols=85 Identities=16% Similarity=0.078 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEe----cCCCchHHHHHHHHHHHH
Q 012506 77 DLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTV----NRQCSSGLQAVADVAAAI 152 (462)
Q Consensus 77 eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v----~~~CsSgl~Ai~~Aa~~I 152 (462)
...-++++++|+++|++++|||.+++=+. .......++..+|+|...-..++ |.+++|-..++..+...=
T Consensus 47 ~~vp~~i~~~L~~~g~~~~dId~~i~Hqa------~~~~~~~i~~~lgi~~~k~~~~~~~~Gn~~sasip~~L~~~~~~~ 120 (149)
T d1ub7a2 47 RVMNTATLEAIEKAGLTPEDIRLFVPHQA------NLRIIDAARERLGLPWERVAVNVDRYGNTSTASIPLALKEAVDAG 120 (149)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEECCS------CHHHHHHHHHTTTCCGGGBCCCHHHHCBCGGGHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhhccccccccEEEeecc------chHHHHHHHhhccchhhHHHHHHHHhcCCcchhHHHHHHHHHHcC
Confidence 34567889999999999999999886221 23456678889999765433333 333444444444444331
Q ss_pred HccCCCEEEEEeecC
Q 012506 153 KAGFYDIGIGAGLES 167 (462)
Q Consensus 153 ~sG~~d~vLv~G~E~ 167 (462)
+-..-|.+|.+|+-.
T Consensus 121 ~~~~Gd~vll~g~G~ 135 (149)
T d1ub7a2 121 RIREGDHVLLVSFGA 135 (149)
T ss_dssp SSCTTCEEEEEEEET
T ss_pred CCCCCCEEEEEEEch
Confidence 112247888877644
|
| >d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=91.65 E-value=0.27 Score=41.54 Aligned_cols=76 Identities=13% Similarity=0.142 Sum_probs=52.8
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCC-----HHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHh
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEAF-----ASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 412 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihdaf-----a~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~ 412 (462)
..|++++|+++|++++|||++-...+. +....+..++||... .+|-...+|+|...-......+..
T Consensus 54 ~~Aa~~aL~~agi~~~dIdlli~~s~t~~~~~p~~a~~v~~~Lg~~~---------~~~di~~~C~g~~~al~~a~~~~~ 124 (172)
T d1ub7a1 54 FKAVEDLLRRHPGALEGVDAVIVATNTPDALFPDTAALVQARFGLKA---------FAYDLLAGCPGWIYALAQAHALVE 124 (172)
T ss_dssp HHHHHHHHHHSTTTTTTEEEEEEECSSCSEEESCHHHHHHHHTTCCC---------EEEEEECSTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcCcccccceEEEEecccccccccchHHHHHHHhccCc---------cceeehhccccHHHHHHHHhhhhh
Confidence 578999999999999999998875433 234566677898432 235556678888877777777766
Q ss_pred cCCCCcEEEEE
Q 012506 413 RGRDCRFGVIS 423 (462)
Q Consensus 413 ~~~~~~~gl~~ 423 (462)
.+. .+++|+.
T Consensus 125 ~~~-~~~~Lvv 134 (172)
T d1ub7a1 125 AGL-AQKVLAV 134 (172)
T ss_dssp TTS-CSEEEEE
T ss_pred cCC-cceeEEe
Confidence 542 2555543
|
| >d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=91.63 E-value=0.41 Score=40.39 Aligned_cols=77 Identities=19% Similarity=0.314 Sum_probs=51.6
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecC-----CCHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHh
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINE-----AFASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKR 412 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihd-----afa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~ 412 (462)
..|++++|+++|++++|||++-... .+.....+..+.||+..-. +|---.+|+|...-......+..
T Consensus 56 ~~Aa~~al~~a~~~~~~Id~li~~s~~~~~~~P~~a~~v~~~Lgl~~~~--------~~di~~~C~g~~~al~~A~~~i~ 127 (174)
T d1hnja1 56 FEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKGCP--------AFDVAAACAGFTYALSVADQYVK 127 (174)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSCCSCSSSCHHHHHHHHHTCCSSC--------EEEECCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhhcccccccccEEEEecCCccccccchhhhhhhccCCCchh--------hhhhhhhhccHHHHHHHHHHHHh
Confidence 4789999999999999999987642 3455677888899995311 12223467766666666666665
Q ss_pred cCCCCcEEEEE
Q 012506 413 RGRDCRFGVIS 423 (462)
Q Consensus 413 ~~~~~~~gl~~ 423 (462)
.+. .+++|+.
T Consensus 128 sg~-~~~~Lvv 137 (174)
T d1hnja1 128 SGA-VKYALVV 137 (174)
T ss_dssp TTS-CSEEEEE
T ss_pred cCC-cceeEEE
Confidence 543 2555553
|
| >d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Polyketide synthase PKS18 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=91.32 E-value=0.19 Score=47.70 Aligned_cols=79 Identities=15% Similarity=0.140 Sum_probs=48.9
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCC----CHHHHHHHHHHcCCCCCCCCCCCCccccCCccchHHHHHHHHHHHHHHhc
Q 012506 338 AVAIPAAVKSAGLQLDDIDLFEINEA----FASQFVYCRNKLGLDPEKINVNGGALAIGHPLGTTGARCVATLLHEMKRR 413 (462)
Q Consensus 338 ~~Ai~~aL~~AGl~~~DID~~eihda----fa~~~~~~~e~LGl~~~~vn~~GG~~a~Ghp~gatG~~~~~~~~~qL~~~ 413 (462)
..|++++|+++|++++|||++-..-+ .+....+..++||+.+.-... ...+ .||+|..........+-+.
T Consensus 97 ~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~v~~~LGl~~~~~~~-----~~~~-~gC~g~~~aL~~A~~~l~s 170 (372)
T d1teda_ 97 VDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPSISRV-----VVNF-MGCAAAMNALGTATNYVRA 170 (372)
T ss_dssp HHHHHHHHTTCCCCGGGEEEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEE-----EEES-CGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEeccCCCCCchHHHHHHhhhccCCceeEe-----eccc-cCccHHHHHHHHHHHHHhc
Confidence 57999999999999999999975322 234567788999997542111 0101 3566665555555544443
Q ss_pred CCCCcEEEEE
Q 012506 414 GRDCRFGVIS 423 (462)
Q Consensus 414 ~~~~~~gl~~ 423 (462)
+.. +.+|+.
T Consensus 171 g~~-~~~LVV 179 (372)
T d1teda_ 171 HPA-MKALVV 179 (372)
T ss_dssp STT-CEEEEE
T ss_pred CCC-ccceee
Confidence 322 455553
|
| >d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=90.55 E-value=0.33 Score=39.68 Aligned_cols=82 Identities=17% Similarity=0.157 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceEEe----cCCCchHHHHHHHHHHHH
Q 012506 77 DLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVRTV----NRQCSSGLQAVADVAAAI 152 (462)
Q Consensus 77 eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~~v----~~~CsSgl~Ai~~Aa~~I 152 (462)
....++++++|+++|++++|||.++.=+. ....-..++..+|+|......++ |.+++|-..++..+ +
T Consensus 44 ~~~~~~i~~~L~~~g~~~~dId~~i~Hq~------~~~~~~~~~~~l~l~~~k~~~~~~~~GN~~sasip~~L~~~---~ 114 (143)
T d1hnja2 44 TELAHIVDETLAANNLDRSQLDWLVPHQA------NLRIISATAKKLGMSMDNVVVTLDRHGNTSAASVPCALDEA---V 114 (143)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCCEEEECCS------CHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---H
T ss_pred hhhhHHHHHHHHHhhhcccccceEEeccC------chHHHHHHHHhCccchhhhhhhhhhhcccccchHHHHHHHH---H
Confidence 34577889999999999999999986221 23456677889999854333332 44455555555554 4
Q ss_pred HccCC---CEEEEEeecC
Q 012506 153 KAGFY---DIGIGAGLES 167 (462)
Q Consensus 153 ~sG~~---d~vLv~G~E~ 167 (462)
+.|+. |.++.+|+-.
T Consensus 115 ~~~~~~~Gd~vll~g~G~ 132 (143)
T d1hnja2 115 RDGRIKPGQLVLLEAFGG 132 (143)
T ss_dssp HTTCSCTTCEEEEEEEET
T ss_pred HhCCCCCCCEEEEEEEeh
Confidence 44543 8888887654
|
| >d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=89.86 E-value=0.36 Score=39.99 Aligned_cols=84 Identities=15% Similarity=0.153 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccccHHHHHHHHcCCCCCcceE-Eec-CC-CchHHHHHHHHHHHH
Q 012506 76 DDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVPVR-TVN-RQ-CSSGLQAVADVAAAI 152 (462)
Q Consensus 76 ~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~~~a~~~a~~~Glp~~~p~~-~v~-~~-CsSgl~Ai~~Aa~~I 152 (462)
..-+.++++++|+++|++++|||.+++=+. ....-..++..+|+|...-.. .+. -+ |+|...- ..-...+
T Consensus 47 v~~vp~~i~~~L~~~gl~~~dId~~i~Hq~------~~~~~~~v~~~lgi~~ek~~~~~~~~~GNt~Sasip-~~L~~~~ 119 (153)
T d1mzja2 47 VADVVPAAREALEVAGLTVGDLVAFVPHQA------NLRIIDVLVDRLGVPEHVVVSRDAEDTGNTSSASVA-LALDRLV 119 (153)
T ss_dssp HHHHHHHHHHHHHTTTCCGGGCSEEEECCS------CHHHHHHHHHHHTCCTTSEECCTHHHHCBCTTHHHH-HHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCcccCCEEEEcCC------cHHHHHHHHHHhCCCchhcchhhhhhcCCcccchHH-HHHHHHH
Confidence 345567888999999999999999987221 334566788899998553222 222 12 3333211 2233345
Q ss_pred HccCC---CEEEEEeec
Q 012506 153 KAGFY---DIGIGAGLE 166 (462)
Q Consensus 153 ~sG~~---d~vLv~G~E 166 (462)
+.|.. |.++.+|+-
T Consensus 120 ~~~~~~~Gd~ill~~fG 136 (153)
T d1mzja2 120 RSGAVPGGGPALMIGFG 136 (153)
T ss_dssp HHTSSCTTCEEEEEEEE
T ss_pred HcCCCCCCCEEEEEEEc
Confidence 55543 788887753
|
| >d1xpma2 c.95.1.2 (A:168-388) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS species: Staphylococcus aureus [TaxId: 1280]
Probab=88.02 E-value=0.65 Score=40.83 Aligned_cols=92 Identities=13% Similarity=0.067 Sum_probs=61.6
Q ss_pred HHHHHHHHHcCCCCCCccEEEecCCCHHHHHHHHHHcCCCCC---------CCCCCC-CccccCCccchHHHHHHHHHHH
Q 012506 339 VAIPAAVKSAGLQLDDIDLFEINEAFASQFVYCRNKLGLDPE---------KINVNG-GALAIGHPLGTTGARCVATLLH 408 (462)
Q Consensus 339 ~Ai~~aL~~AGl~~~DID~~eihdafa~~~~~~~e~LGl~~~---------~vn~~G-G~~a~Ghp~gatG~~~~~~~~~ 408 (462)
.|.+...++.|.+.+|+|++-.|.+|+-+..-+.+.|..... ++-++= -.--+|+...+|=-..++.++.
T Consensus 44 ~~~~~~~~~~g~~~~dfd~~~fH~P~~km~~ka~~~l~~~~~~~~~~~~~~~~~~s~~~~~~iGN~YTaSlyl~L~Sll~ 123 (221)
T d1xpma2 44 QSWNEYAKRQGKSLADFASLCFHVPFTKMGKKALESIIDNADETTQERLRSGYEDAVDYNRYVGNIYTGSLYLSLISLLE 123 (221)
T ss_dssp HHHHHHHHHHTCCGGGCSEEEECCSSHHHHHHHHHTTGGGSCHHHHHHHHHHHHHHTTGGGGTCCCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCChhhhheEEeecCchhhHHHHHHHHHhccchhhHHHHHHhhhhHHHHHHhcCCcchHHHHHHHHhhhc
Confidence 456666788999999999999999999999888887754322 111100 0012689998887777777775
Q ss_pred HHHhcCCCCcEEEEEeecccceeEE
Q 012506 409 EMKRRGRDCRFGVISMCIGTGMGAA 433 (462)
Q Consensus 409 qL~~~~~~~~~gl~~~~~G~G~g~A 433 (462)
.-.... +.++|+.+ .|.|.++.
T Consensus 124 ~~~~~~-G~rIglfS--YGSG~~ae 145 (221)
T d1xpma2 124 NRDLQA-GETIGLFS--YGSGSVGE 145 (221)
T ss_dssp HSCCCT-TCEEEEEE--EETTTEEE
T ss_pred cccCCC-CCEEEEEE--ecCCccee
Confidence 422222 23888887 56665543
|
| >d1okja1 c.55.1.9 (A:1-106) Hypothetical protein YeaZ {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: YeaZ-like domain: Hypothetical protein YeaZ species: Escherichia coli [TaxId: 562]
Probab=81.46 E-value=0.4 Score=37.09 Aligned_cols=56 Identities=11% Similarity=0.195 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCcEEEEeccCCCCccc----cHHHHHHHHcCCCCCcceEEec
Q 012506 75 PDDLLAPVLKAVIEKTNVDPSEVGDIVVGTVLAPGSQRA----SECRMAAFYAGFPETVPVRTVN 135 (462)
Q Consensus 75 ~~eL~~~A~~~Al~~agl~~~~Id~vivG~~~~~~~~~~----~~a~~~a~~~Glp~~~p~~~v~ 135 (462)
..+.+...++++|++++++++|||.++++.-.+.+. +- ..++-++..++ .|.+.|+
T Consensus 33 h~~~l~~~i~~~l~~~~~~~~di~~i~v~~GPGsfT-glRig~s~akgla~~~~----ip~~~v~ 92 (106)
T d1okja1 33 HTQRILPMVQDILTTSGTSLTDINALAYGRGPGSFT-GVRIGIGIAQGLALGAE----LPMIGVS 92 (106)
T ss_dssp TTTTHHHHHHHHHHHTTCCGGGCCEEEEEEESSCHH-HHHHHHHHHHHHHHHTT----CCEEEEE
T ss_pred HHHHHHHHHHHHHHhcCCcceeeeEEEEeeccCccc-cchHHHHHHHHHHHHcC----CCEEEeC
Confidence 345567788999999999999999999987544332 22 23444444444 4777774
|