Citrus Sinensis ID: 012538

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-
MAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLVVNQVELAGIGSYDAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYGCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSKYCPFIYGHGKIKFGAQMGYCNYLLWAPLSLPTLFYVIVPPLCLGHGISLFPKVSSLWFIPFAYVFVAQNAYSICEALSCGHKLKSWWNLQRMLIIRRTTAFFFGFVDCIVKQMGLSQTAFAITAKMVTEDVMERYEQEMMEFGSSSVMFTIVATLAMLNLFSLIGGFIDIIFLDFGALGNLMCQIILCGLMVLVNVPIYEALFIRKDKGCMPFSVMFKSMFLASLACLLPYV
ccccccccccccccccHHHHHHHHccccccccEEEEEccccccccHHHHHHHHHcHHccccccEEEEEEcccEEccccccccccccccEEEHHHcccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHccccEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEccccccccHHHHHHHHcEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEHHHHHHHHHHHHHcccc
cccccccccccccHHHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHHHHccccccccEEEEEccccccccccccccccccEEEEEEcccccccccccEEEcccccccHHHHccccccccccccHHccccccccHHHHHHHHHHHHHccccccccccccEEEEEccccEEEEHccHEcccccEEEEEccccccccccccccHHHHHHHHHHHHcccEEEEEcccccEEcccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccEEcccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHcHEEEHcHHHHHHHHHHHHHHHHHcccccEEEEEEcccccccccHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHcccHcHcHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHcc
marekrpgcphnfkagAMNALIRVSSVisngpvilnldcdmyandGDAIREALCFLLDEKREHEIAfvqhpqrfdnickndlyansYLVVNQVELAgigsydaalycgtgcfhrreslsgakypkdyrnineaknndnrsVDELEKASKVLASCSYEknthwgkemglvygcAAEDVVTGLTIqcrgwksmyfkpnkpaflgvapvTLDIALVQMKRWSEGMFQIFLSkycpfiyghgkikfgAQMGYCnyllwaplslptlfyvivpplclghgislfpkvsslwfipFAYVFVAQNAYSICEALSCGHKLKSWWNLQRMLIIRRTTAFFFGFVDCIVKQMGLSQTAFAITAKMVTEDVMERYEQEMMEFGSSSVMFTIVATLAMLNLFSLIGGFIDIIFLDFGALGNLMCQIILCGLMVLVNVPIYEALFIrkdkgcmpfsVMFKSMFLASLACLLPYV
marekrpgcphnfkaGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLVVNQVELAGIGSYDAALYCGTGCFHRRESlsgakypkdyrnineaknndnrsvdELEKASKVLASCSYEKNTHWGKEMGLVYGCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSKYCPFIYGHGKIKFGAQMGYCNYLLWAPLSLPTLFYVIVPPLCLGHGISLFPKVSSLWFIPFAYVFVAQNAYSICEALSCGHKLKSWWNLQRMLIIRRTTAFFFGFVDCIVKQMGLSQTAFAITAKMVTEDVMERYEQEMMEFGSSSVMFTIVATLAMLNLFSLIGGFIDIIFLDFGALGNLMCQIILCGLMVLVNVPIYEALFIRKDKGCMPFSVMFKSMFLASLACLLPYV
MAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLVVNQVELAGIGSYDAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYGCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSKYCPFIYGHGKIKFGAQMGYCNYLLWAPLSLPTLFYVIVPPLCLGHGISLFPKVSSLWFIPFAYVFVAQNAYSICEALSCGHKLKSWWNLQRMLIIRRTTAFFFGFVDCIVKQMGLSQTAFAITAKMVTEDVMERYEQEMMEFGSSSVMFTIVATLAMLNlfsliggfidiifldfgalGNLMCQIILCGLMVLVNVPIYEALFIRKDKGCMPFSVMFKSMFLASLACLLPYV
************FKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLVVNQVELAGIGSYDAALYCGTGCFHRRES********************************VLASCSYEKNTHWGKEMGLVYGCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSKYCPFIYGHGKIKFGAQMGYCNYLLWAPLSLPTLFYVIVPPLCLGHGISLFPKVSSLWFIPFAYVFVAQNAYSICEALSCGHKLKSWWNLQRMLIIRRTTAFFFGFVDCIVKQMGLSQTAFAITAKMVTEDVMERYEQEMMEFGSSSVMFTIVATLAMLNLFSLIGGFIDIIFLDFGALGNLMCQIILCGLMVLVNVPIYEALFIRKDKGCMPFSVMFKSMFLASLACLLPY*
*AREK**GCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLVVNQVELAGIGSYDAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVL**CSYEKNTHWGKEMGLVYGCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSKYCPFIYGHGKIKFGAQMGYCNYLLWAPLSLPTLFYVIVPPLCLGHGISLFPKVSSLWFIPFAYVFVAQNAYSICEALSCGHKLKSWWNLQRMLIIRRTTAFFFGFVDCIVKQMGLSQTAFAITAKMV******RYEQEMMEFGSSSVMFTIVATLAMLNLFSLIGGFIDIIFLDFGALGNLMCQIILCGLMVLVNVPIYEALFIRKDKGCMPFSVMFKSMFLASLACLLPYV
********CPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLVVNQVELAGIGSYDAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYGCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSKYCPFIYGHGKIKFGAQMGYCNYLLWAPLSLPTLFYVIVPPLCLGHGISLFPKVSSLWFIPFAYVFVAQNAYSICEALSCGHKLKSWWNLQRMLIIRRTTAFFFGFVDCIVKQMGLSQTAFAITAKMVTEDVMERYEQEMMEFGSSSVMFTIVATLAMLNLFSLIGGFIDIIFLDFGALGNLMCQIILCGLMVLVNVPIYEALFIRKDKGCMPFSVMFKSMFLASLACLLPYV
******PGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLVVNQVELAGIGSYDAALYCGTGCFHRRESLSGAKYPKDYRN*******DNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYGCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSKYCPFIYGHGKIKFGAQMGYCNYLLWAPLSLPTLFYVIVPPLCLGHGISLFPKVSSLWFIPFAYVFVAQNAYSICEALSCGHKLKSWWNLQRMLIIRRTTAFFFGFVDCIVKQMGLSQTAFAITAKMVTEDVMERYEQEMMEFGSSSVMFTIVATLAMLNLFSLIGGFIDIIFLDFGALGNLMCQIILCGLMVLVNVPIYEALFIRKDKGCMPFSVMFKSMFLASLACLLPYV
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MAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKNDLYANSYLVVNQVELAGIGSYDAALYCGTGCFHRRESLSGAKYPKDxxxxxxxxxxxxxxxxxxxxxSKVLASCSYEKNTHWGKEMGLVYGCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSKYCPFIYGHGKIKFGAQMGYCNYLLWAPLSLPTLFYVIVPPLCLGHGISLFPKVSSLWFIPFAYVFVAQNAYSICEALSCGHKLKSWWNLQRMLIIRRTTAFFFGFVDCIVKQMGLSQTAFAITAKMVTEDVMERYEQEMMEFGSSSVMFTIVATLAMLNLFSLIGGFIDIIFLDFGALGNLMCQIILCGLMVLVNVPIYEALFIRKDKGCMPFSVMFKSMFLASLACLLPYV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query461 2.2.26 [Sep-21-2011]
Q651X6728 Cellulose synthase-like p yes no 0.993 0.629 0.533 1e-147
Q651X7737 Cellulose synthase-like p yes no 1.0 0.625 0.512 1e-138
Q8VZK9729 Cellulose synthase-like p yes no 0.980 0.620 0.543 1e-135
Q0DXZ1745 Cellulose synthase-like p no no 0.993 0.614 0.485 1e-132
Q8VYR4722 Cellulose synthase-like p no no 0.965 0.616 0.369 1e-86
Q570S7760 Cellulose synthase-like p no no 0.937 0.568 0.388 3e-86
Q0WVN5751 Cellulose synthase-like p no no 0.986 0.605 0.371 3e-84
Q9SWW61026 Cellulose synthase A cata no no 0.978 0.439 0.307 2e-69
Q339N5750 Cellulose synthase-like p no no 0.980 0.602 0.326 8e-66
Q9SKJ51065 Probable cellulose syntha no no 0.980 0.424 0.305 2e-64
>sp|Q651X6|CSLE6_ORYSJ Cellulose synthase-like protein E6 OS=Oryza sativa subsp. japonica GN=CSLE6 PE=2 SV=1 Back     alignment and function desciption
 Score =  521 bits (1342), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 247/463 (53%), Positives = 326/463 (70%), Gaps = 5/463 (1%)

Query: 1   MAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEK 60
           MAREK P   HNFKAGA+NALIRVS++IS+ PVILN+DCDMY+N+ D+IR+ALCF LDE+
Sbjct: 269 MAREKSPQYHHNFKAGALNALIRVSALISDSPVILNVDCDMYSNNSDSIRDALCFFLDEE 328

Query: 61  REHEIAFVQHPQRFDNICKNDLYANSYLVVNQVELAGIGSYDAALYCGTGCFHRRESLSG 120
             H+I FVQ+PQ ++N+ KN++Y NS  V+N VE+ G+ S    LY GTGCFHRRE L G
Sbjct: 329 MSHKIGFVQYPQNYNNMTKNNIYGNSLNVINHVEMRGLDSAGGCLYIGTGCFHRREILCG 388

Query: 121 AKYPKDYRNI--NEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYGCAAEDVV 178
            K+ KDY+       K   + ++DE+E+ +K LA+C+YE  T WG E+G+ YGC  EDV+
Sbjct: 389 KKFSKDYKEDWGRGIKERGHENIDEIEEKAKSLATCTYELRTQWGNEIGVKYGCPVEDVI 448

Query: 179 TGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSKYCPFIYGHG 238
           TGL I CRGW+S+Y +P + AF+GVAP TL   ++Q KRWSEG F IFLSK+  F++GHG
Sbjct: 449 TGLAIHCRGWESVYMEPQRAAFVGVAPATLAQTILQHKRWSEGNFTIFLSKHNTFLFGHG 508

Query: 239 KIKFGAQMGYCNYLLWAPLSLPTLFYVIVPPLCLGHGISLFPKVSSLWFIPFAYVFVAQN 298
           KI    QMGYC Y LWA  SLPT++YV++P L L  G  LFP++ S W  PF YVF  + 
Sbjct: 509 KISLQLQMGYCIYGLWAANSLPTIYYVMIPALGLVKGTPLFPEIMSPWATPFIYVFCVKT 568

Query: 299 AYSICEALSCGHKLKSWWNLQRMLIIRRTTAFFFGFVDCIVKQMGLSQTAFAITAKMVTE 358
            YS+ EAL  G  LK WWN QRM +++R T++ +GF+D I K +GLS+ +F ITAK+   
Sbjct: 569 LYSLYEALLSGDTLKGWWNGQRMWMVKRITSYLYGFIDTIRKLLGLSKMSFEITAKVSDG 628

Query: 359 DVMERYEQEMMEFGSSSVMFTIVATLAMLNLFSLIGGFIDIIFLDFGALGNLMCQIILCG 418
           D  +RYEQE++EFGSSS  F I+AT+A+LN   L+ G   I+    G     + Q+ILCG
Sbjct: 629 DEAKRYEQEILEFGSSSPEFVIIATVALLNFVCLVAGLSKIM---AGVWNVFLPQVILCG 685

Query: 419 LMVLVNVPIYEALFIRKDKGCMPFSVMFKSMFLASLACLLPYV 461
           L+V+ N+PIYEA+F+RKDKG +P  V   S+    LA LLP V
Sbjct: 686 LIVITNIPIYEAMFVRKDKGRIPLPVTLASIGFVMLAFLLPIV 728
Thought to be a Golgi-localized beta-glycan synthase that polymerize the backbones of noncellulosic polysaccharides (hemicelluloses) of plant cell wall.
Oryza sativa subsp. japonica (taxid: 39947)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -
>sp|Q651X7|CSLE1_ORYSJ Cellulose synthase-like protein E1 OS=Oryza sativa subsp. japonica GN=CSLE1 PE=2 SV=2 Back     alignment and function description
>sp|Q8VZK9|CSLE1_ARATH Cellulose synthase-like protein E1 OS=Arabidopsis thaliana GN=CSLE1 PE=1 SV=1 Back     alignment and function description
>sp|Q0DXZ1|CSLE2_ORYSJ Cellulose synthase-like protein E2 OS=Oryza sativa subsp. japonica GN=CSLE2 PE=2 SV=1 Back     alignment and function description
>sp|Q8VYR4|CSLG2_ARATH Cellulose synthase-like protein G2 OS=Arabidopsis thaliana GN=CSLG2 PE=2 SV=1 Back     alignment and function description
>sp|Q570S7|CSLG1_ARATH Cellulose synthase-like protein G1 OS=Arabidopsis thaliana GN=CSLG1 PE=2 SV=1 Back     alignment and function description
>sp|Q0WVN5|CSLG3_ARATH Cellulose synthase-like protein G3 OS=Arabidopsis thaliana GN=CSLG3 PE=2 SV=2 Back     alignment and function description
>sp|Q9SWW6|CESA7_ARATH Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Arabidopsis thaliana GN=CESA7 PE=1 SV=1 Back     alignment and function description
>sp|Q339N5|CSLH1_ORYSJ Cellulose synthase-like protein H1 OS=Oryza sativa subsp. japonica GN=CSLH1 PE=2 SV=2 Back     alignment and function description
>sp|Q9SKJ5|CESAA_ARATH Probable cellulose synthase A catalytic subunit 10 [UDP-forming] OS=Arabidopsis thaliana GN=CESA10 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query461
71493366 740 cellulose synthase-like protein CslE [Ni 0.989 0.616 0.680 0.0
255563556 606 cellulose synthase, putative [Ricinus co 0.991 0.754 0.662 0.0
449516826 757 PREDICTED: LOW QUALITY PROTEIN: cellulos 0.993 0.605 0.635 1e-178
449462387 731 PREDICTED: cellulose synthase-like prote 0.973 0.614 0.641 1e-176
296089938 675 unnamed protein product [Vitis vinifera] 1.0 0.682 0.617 1e-175
225461955 736 PREDICTED: cellulose synthase-like prote 1.0 0.626 0.617 1e-174
356553499 736 PREDICTED: cellulose synthase-like prote 0.995 0.623 0.632 1e-174
147773093 718 hypothetical protein VITISV_036212 [Viti 0.965 0.619 0.584 1e-160
359497539 734 PREDICTED: cellulose synthase-like prote 0.991 0.622 0.583 1e-152
357154038 725 PREDICTED: cellulose synthase-like prote 1.0 0.635 0.551 1e-152
>gi|71493366|gb|AAZ32787.1| cellulose synthase-like protein CslE [Nicotiana tabacum] Back     alignment and taxonomy information
 Score =  676 bits (1743), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 315/463 (68%), Positives = 381/463 (82%), Gaps = 7/463 (1%)

Query: 1   MAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEK 60
           M+REK+P CPHNFKAG+MN+LIRVSS ISN P+ILNLDCDMY+ND DAIRE+LCF +DEK
Sbjct: 279 MSREKKPKCPHNFKAGSMNSLIRVSSQISNAPIILNLDCDMYSNDPDAIRESLCFFMDEK 338

Query: 61  REHEIAFVQHPQRFDNICKNDLYANSYLVVNQVELAGIGSYDAALYCGTGCFHRRESLSG 120
           + HEIAFVQ+PQR++N  KND+Y N   V +++ELAG+G Y AALYCGTGCFHRRESL G
Sbjct: 339 KGHEIAFVQYPQRYNNATKNDIYGNVARVTHEIELAGLGGYGAALYCGTGCFHRRESLCG 398

Query: 121 AKYPKDYRNI---NEAKNNDNRSVDELEKASKVLASCSYEKNTHWGKEMGLVYGCAAEDV 177
            K  ++Y  +   N+ +    ++V+ELE+ASKV+A+CSYE+ T WGK+MGL+YGC  ED+
Sbjct: 399 RKVSEEYTTVEWNNKEEKCTYKTVEELEEASKVVANCSYEEGTQWGKQMGLIYGCPVEDI 458

Query: 178 VTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSKYCPFIYGH 237
           +TGLTIQCRGWKS+Y+ P+KPAFLGVAP  LD+ALVQ KRWSEG+FQIFLSKYCPFIYGH
Sbjct: 459 ITGLTIQCRGWKSVYYNPSKPAFLGVAPTILDVALVQHKRWSEGLFQIFLSKYCPFIYGH 518

Query: 238 GKIKFGAQMGYCNYLLWAPLSLPTLFYVIVPPLCLGHGISLFPKVSSLWFIPFAYV-FVA 296
           GKIKF AQMGYC YLLWAP+S+PTLFYV VP LCL HG+SLFP+VSSLWF+PFAYV F A
Sbjct: 519 GKIKFAAQMGYCIYLLWAPVSVPTLFYVSVPSLCLLHGVSLFPEVSSLWFLPFAYVLFTA 578

Query: 297 QNAYSICEALSCGHKLKSWWNLQRMLIIRRTTAFFFGFVDCIVKQMGLSQTAFAITAKMV 356
           +  YS+ EA+SCG   KSWWNLQRM +IRRTTA+FF F+D ++KQ+GLSQTAFA+T K+V
Sbjct: 579 KFVYSLAEAMSCGDTPKSWWNLQRMWMIRRTTAYFFAFIDSVIKQLGLSQTAFALTTKVV 638

Query: 357 TEDVMERYEQEMMEFGSSSVMFTIVATLAMLNLFSLIGGFIDIIFLDFGALGNLMCQIIL 416
            +DV  RYEQE+MEFGSSS MFTI ATLA+LNL S I G   I  L    + N + Q+IL
Sbjct: 639 DDDVQRRYEQEIMEFGSSSAMFTITATLALLNLISFIWG---IKKLALDGVVNTVPQVIL 695

Query: 417 CGLMVLVNVPIYEALFIRKDKGCMPFSVMFKSMFLASLACLLP 459
           CGL+VLVNVP+YEALF R DKG  P SV+ +S+ L S+ACLLP
Sbjct: 696 CGLIVLVNVPVYEALFFRSDKGSFPSSVLLRSVVLVSIACLLP 738

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255563556|ref|XP_002522780.1| cellulose synthase, putative [Ricinus communis] gi|223538018|gb|EEF39631.1| cellulose synthase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449516826|ref|XP_004165447.1| PREDICTED: LOW QUALITY PROTEIN: cellulose synthase-like protein E6-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449462387|ref|XP_004148922.1| PREDICTED: cellulose synthase-like protein E6-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|296089938|emb|CBI39757.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225461955|ref|XP_002266273.1| PREDICTED: cellulose synthase-like protein E6-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|356553499|ref|XP_003545093.1| PREDICTED: cellulose synthase-like protein E6-like [Glycine max] Back     alignment and taxonomy information
>gi|147773093|emb|CAN62860.1| hypothetical protein VITISV_036212 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359497539|ref|XP_003635559.1| PREDICTED: cellulose synthase-like protein E6-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|357154038|ref|XP_003576649.1| PREDICTED: cellulose synthase-like protein E6-like [Brachypodium distachyon] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query461
TAIR|locus:2012050729 CSLE1 "AT1G55850" [Arabidopsis 0.978 0.618 0.538 1.4e-128
TAIR|locus:2138116722 CSLG2 "AT4G24000" [Arabidopsis 0.965 0.616 0.358 1.4e-78
TAIR|locus:2138126760 CSLG1 "AT4G24010" [Arabidopsis 0.932 0.565 0.382 1e-77
TAIR|locus:2138106751 CSLG3 "AT4G23990" [Arabidopsis 0.986 0.605 0.365 1.5e-76
TAIR|locus:21363081084 CESA2 "cellulose synthase A2" 0.663 0.282 0.296 2e-67
TAIR|locus:2124167985 IRX1 "IRREGULAR XYLEM 1" [Arab 0.783 0.366 0.276 7.6e-67
TAIR|locus:21781931069 CESA5 "cellulose synthase 5" [ 0.683 0.294 0.295 1.1e-66
TAIR|locus:20525761088 CESA9 "cellulose synthase A9" 0.661 0.280 0.295 1.2e-66
TAIR|locus:21567891065 CEV1 "CONSTITUTIVE EXPRESSION 0.668 0.289 0.294 1.4e-66
TAIR|locus:21789351026 IRX3 "IRREGULAR XYLEM 3" [Arab 0.663 0.298 0.295 1.9e-66
TAIR|locus:2012050 CSLE1 "AT1G55850" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1262 (449.3 bits), Expect = 1.4e-128, P = 1.4e-128
 Identities = 246/457 (53%), Positives = 303/457 (66%)

Query:     1 MAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEK 60
             ++REKRP   HNFKAGAMNAL+RVSS I+ G +ILNLDCDMYAN+  + R+ALC LLDEK
Sbjct:   272 LSREKRPQHHHNFKAGAMNALLRVSSKITCGKIILNLDCDMYANNSKSTRDALCILLDEK 331

Query:    61 REHEIAFVQHPQRFDNICKNDLYANSYLVVNQVELAGIGSYDAALYCGTGCFHRRESLSG 120
                EIAFVQ PQ FDN+ +NDLY +   V   VE  G+      LY GTGCFHRR+ + G
Sbjct:   332 EGKEIAFVQFPQCFDNVTRNDLYGSMMRVGIDVEFLGLDGNGGPLYIGTGCFHRRDVICG 391

Query:   121 AKYPKDYRNINEAKNNDNRSVDELE-KASKVLASCSYEKNTHWGKEMGLVYGCAAEDVVT 179
              KY ++     E +    R  + LE +  K LASC+YE+NT WGKEMG+ YGC  EDV+T
Sbjct:   392 RKYGEE-----EEEEESERIHENLEPEMIKALASCTYEENTQWGKEMGVKYGCPVEDVIT 446

Query:   180 GLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSKYCPFIYGHGK 239
             GLTIQCRGWKS Y  P K AFLGVAP  L   LVQ +RWSEG FQI LSKY P  YG GK
Sbjct:   447 GLTIQCRGWKSAYLNPEKQAFLGVAPTNLHQMLVQQRRWSEGDFQIMLSKYSPVWYGKGK 506

Query:   240 IKFGAQMGYCNYLLWAPLSLPTLFYVIVPPLCLGHGISLFPKVSSLWFIPFAYVFVAQNA 299
             I  G  +GYC Y LWAP SLP L Y ++  LCL  GI LFPKVSS WFIPF YV VA  A
Sbjct:   507 ISLGLILGYCCYCLWAPSSLPVLIYSVLTSLCLFKGIPLFPKVSSSWFIPFGYVTVAATA 566

Query:   300 YSICEALSCGHKLKSWWNLQRMLIIRRTTAFFFGFVDCIVKQMGLSQTAFAITAKMVTED 359
             YS+ E L CG   + WWN QRM + RRT++F FGF+D I K +G+S++AF ITAK+  E+
Sbjct:   567 YSLAEFLWCGGTFRGWWNEQRMWLYRRTSSFLFGFMDTIKKLLGVSESAFVITAKVAEEE 626

Query:   360 VMERYEQEMMEFGSSSVMFTIVATLAMLNXXXXXXXXXXXXXXXXXXXGNLMCQIILCGL 419
               ERY++E+MEFG  S MF ++ TL MLN                     +  Q ++ G+
Sbjct:   627 AAERYKEEVMEFGVESPMFLVLGTLGMLNLFCFAAAVARLVSGDGGDLKTMGMQFVITGV 686

Query:   420 MVLVNVPIYEALFIRKDKGCMPFSVMFKSMFLASLAC 456
             +V++N P+Y+ + +R+DKG MP SV  KS+ LA  AC
Sbjct:   687 LVVINWPLYKGMLLRQDKGKMPMSVTVKSVVLALSAC 723
GO:0000271 "polysaccharide biosynthetic process" evidence=ISS
GO:0005794 "Golgi apparatus" evidence=ISM
GO:0009832 "plant-type cell wall biogenesis" evidence=ISS
GO:0016020 "membrane" evidence=IEA
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS
GO:0016759 "cellulose synthase activity" evidence=ISS
GO:0016760 "cellulose synthase (UDP-forming) activity" evidence=IEA
GO:0030244 "cellulose biosynthetic process" evidence=IEA
GO:0005783 "endoplasmic reticulum" evidence=IDA
GO:0005886 "plasma membrane" evidence=IDA
GO:0046482 "para-aminobenzoic acid metabolic process" evidence=RCA
TAIR|locus:2138116 CSLG2 "AT4G24000" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2138126 CSLG1 "AT4G24010" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2138106 CSLG3 "AT4G23990" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2136308 CESA2 "cellulose synthase A2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2124167 IRX1 "IRREGULAR XYLEM 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2178193 CESA5 "cellulose synthase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2052576 CESA9 "cellulose synthase A9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2156789 CEV1 "CONSTITUTIVE EXPRESSION OF VSP 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2178935 IRX3 "IRREGULAR XYLEM 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8VZK9CSLE1_ARATH2, ., 4, ., 1, ., -0.54380.98040.6200yesno
Q651X7CSLE1_ORYSJ2, ., 4, ., 1, ., -0.51291.00.6255yesno
Q651X6CSLE6_ORYSJ2, ., 4, ., 1, ., -0.53340.99340.6291yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.10.691
4th Layer2.4.1.12LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query461
PLN02893734 PLN02893, PLN02893, Cellulose synthase-like protei 1e-136
pfam03552716 pfam03552, Cellulose_synt, Cellulose synthase 2e-84
PLN021891040 PLN02189, PLN02189, cellulose synthase 2e-83
PLN02195977 PLN02195, PLN02195, cellulose synthase A 2e-82
PLN02190756 PLN02190, PLN02190, cellulose synthase-like protei 3e-78
PLN024361094 PLN02436, PLN02436, cellulose synthase A 7e-76
PLN029151044 PLN02915, PLN02915, cellulose synthase A [UDP-form 1e-46
PLN024001085 PLN02400, PLN02400, cellulose synthase 4e-43
PLN026381079 PLN02638, PLN02638, cellulose synthase A (UDP-form 3e-42
PLN026381079 PLN02638, PLN02638, cellulose synthase A (UDP-form 5e-37
PLN022481135 PLN02248, PLN02248, cellulose synthase-like protei 9e-37
PLN02915 1044 PLN02915, PLN02915, cellulose synthase A [UDP-form 5e-36
PLN024001085 PLN02400, PLN02400, cellulose synthase 1e-32
PLN022481135 PLN02248, PLN02248, cellulose synthase-like protei 2e-21
cd06421234 cd06421, CESA_CelA_like, CESA_CelA_like are involv 8e-19
TIGR03030713 TIGR03030, CelA, cellulose synthase catalytic subu 1e-11
COG1215439 COG1215, COG1215, Glycosyltransferases, probably i 2e-06
PRK11498 852 PRK11498, bcsA, cellulose synthase catalytic subun 0.002
>gnl|CDD|215483 PLN02893, PLN02893, Cellulose synthase-like protein Back     alignment and domain information 
 Score =  407 bits (1048), Expect = e-136
 Identities = 182/457 (39%), Positives = 258/457 (56%), Gaps = 10/457 (2%)

Query: 2   AREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKR 61
           +REK    PH+FKAGA+N L+RVS+ ++N P+IL LDCDMY+ND      ALC+LLD   
Sbjct: 270 SREKSKNSPHHFKAGALNTLLRVSATMTNAPIILTLDCDMYSNDPQTPLRALCYLLDPSM 329

Query: 62  EHEIAFVQHPQRFDNICKNDLYANSYLVVNQVELAGIGSYDAALYCGTGCFHRRESLSGA 121
           + ++ +VQ PQ F  I KND+YA     + Q+ + G+       Y GTGCF RR    G 
Sbjct: 330 DPKLGYVQFPQIFHGINKNDIYAGELKRLFQINMIGMDGLAGPNYVGTGCFFRRRVFYGG 389

Query: 122 KYPKDYRNINEAKNNDNRSVDELEKASKVLAS------CSYEKNTHWGKEMGLVYGCAAE 175
                   I E   N +  VD+  K+ +VLA       C+YE  T+WG +MG  YG   E
Sbjct: 390 PSSLILPEIPEL--NPDHLVDKSIKSQEVLALAHHVAGCNYENQTNWGSKMGFRYGSLVE 447

Query: 176 DVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSKYCPFIY 235
           D  TG  +QC GWKS++  P +PAFLG +P+ L   L Q KRWS G+ ++  SKY P  +
Sbjct: 448 DYYTGYRLQCEGWKSIFCNPKRPAFLGDSPINLHDVLNQQKRWSVGLLEVAFSKYSPITF 507

Query: 236 GHGKIKFGAQMGYCNYLLWAPLSLPTLFYVIVPPLCLGHGISLFPKVSSLWFIPFAYVFV 295
           G   I     +GY +Y  W   S+P   Y  +P L L +G+S+FPK S  WF  + ++F+
Sbjct: 508 GVKSIGLLMGLGYAHYAFWPIWSIPITIYAFLPQLALLNGVSIFPKASDPWFFLYIFLFL 567

Query: 296 AQNAYSICEALSCGHKLKSWWNLQRMLIIRRTTAFFFGFVDCIVKQMGLSQTAFAITAKM 355
                 + + L  G  ++ WWN QRM +IR  ++F FG V+ ++K +G+S   F +T+K+
Sbjct: 568 GAYGQDLLDFLLSGGTIQRWWNDQRMWMIRGLSSFLFGLVEFLLKTLGISTFGFNVTSKV 627

Query: 356 VTEDVMERYEQEMMEFGSSSVMFTIVATLAMLNLFSLIGGFIDIIFLDFGALGNLMCQII 415
           V E+  +RYEQ + EFG SS MF  + T A++NL S + G   I       L  L  Q+ 
Sbjct: 628 VDEEQSKRYEQGIFEFGVSSPMFLPLTTAAIINLVSFLWGIAQIFRQ--RNLEGLFLQMF 685

Query: 416 LCGLMVLVNVPIYEALFIRKDKGCMPFSVMFKSMFLA 452
           L G  V+   PIYEA+ +R D G +P  +   S+ LA
Sbjct: 686 LAGFAVVNCWPIYEAMVLRTDDGKLPVKITLISIVLA 722

Length = 734
>gnl|CDD|217611 pfam03552, Cellulose_synt, Cellulose synthase Back     alignment and domain information
>gnl|CDD|215121 PLN02189, PLN02189, cellulose synthase Back     alignment and domain information
>gnl|CDD|215124 PLN02195, PLN02195, cellulose synthase A Back     alignment and domain information
>gnl|CDD|215122 PLN02190, PLN02190, cellulose synthase-like protein Back     alignment and domain information
>gnl|CDD|215239 PLN02436, PLN02436, cellulose synthase A Back     alignment and domain information
>gnl|CDD|215494 PLN02915, PLN02915, cellulose synthase A [UDP-forming], catalytic subunit Back     alignment and domain information
>gnl|CDD|215224 PLN02400, PLN02400, cellulose synthase Back     alignment and domain information
>gnl|CDD|215343 PLN02638, PLN02638, cellulose synthase A (UDP-forming), catalytic subunit Back     alignment and domain information
>gnl|CDD|215343 PLN02638, PLN02638, cellulose synthase A (UDP-forming), catalytic subunit Back     alignment and domain information
>gnl|CDD|215138 PLN02248, PLN02248, cellulose synthase-like protein Back     alignment and domain information
>gnl|CDD|215494 PLN02915, PLN02915, cellulose synthase A [UDP-forming], catalytic subunit Back     alignment and domain information
>gnl|CDD|215224 PLN02400, PLN02400, cellulose synthase Back     alignment and domain information
>gnl|CDD|215138 PLN02248, PLN02248, cellulose synthase-like protein Back     alignment and domain information
>gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>gnl|CDD|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming) Back     alignment and domain information
>gnl|CDD|224136 COG1215, COG1215, Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>gnl|CDD|236918 PRK11498, bcsA, cellulose synthase catalytic subunit; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 461
PLN02893734 Cellulose synthase-like protein 100.0
PF03552720 Cellulose_synt: Cellulose synthase; InterPro: IPR0 100.0
PLN021891040 cellulose synthase 100.0
PLN026381079 cellulose synthase A (UDP-forming), catalytic subu 100.0
PLN024001085 cellulose synthase 100.0
PLN024361094 cellulose synthase A 100.0
PLN02195977 cellulose synthase A 100.0
PLN02190756 cellulose synthase-like protein 100.0
PLN022481135 cellulose synthase-like protein 100.0
PLN029151044 cellulose synthase A [UDP-forming], catalytic subu 100.0
PRK11498 852 bcsA cellulose synthase catalytic subunit; Provisi 100.0
TIGR03030 713 CelA cellulose synthase catalytic subunit (UDP-for 100.0
PRK05454691 glucosyltransferase MdoH; Provisional 99.97
cd04191254 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon 99.96
PRK14583444 hmsR N-glycosyltransferase; Provisional 99.95
COG1215439 Glycosyltransferases, probably involved in cell wa 99.94
PRK11204420 N-glycosyltransferase; Provisional 99.93
TIGR03111439 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0 99.93
PRK14716504 bacteriophage N4 adsorption protein B; Provisional 99.91
PRK11234 727 nfrB bacteriophage N4 adsorption protein B; Provis 99.89
cd06437232 CESA_CaSu_A2 Cellulose synthase catalytic subunit 99.88
cd06421234 CESA_CelA_like CESA_CelA_like are involved in the 99.87
cd06435236 CESA_NdvC_like NdvC_like proteins in this family a 99.87
cd06427241 CESA_like_2 CESA_like_2 is a member of the cellulo 99.87
PF13632193 Glyco_trans_2_3: Glycosyl transferase family group 99.83
PF13641228 Glyco_tranf_2_3: Glycosyltransferase like family 2 99.82
cd04190244 Chitin_synth_C C-terminal domain of Chitin Synthas 99.79
PRK15489 703 nfrB bacteriophage N4 adsorption protein B; Provis 99.77
cd04192229 GT_2_like_e Subfamily of Glycosyltransferase Famil 99.74
cd06434235 GT2_HAS Hyaluronan synthases catalyze polymerizati 99.74
cd02520196 Glucosylceramide_synthase Glucosylceramide synthas 99.71
TIGR03472373 HpnI hopanoid biosynthesis associated glycosyl tra 99.7
COG2943 736 MdoH Membrane glycosyltransferase [Cell envelope b 99.68
PF13506175 Glyco_transf_21: Glycosyl transferase family 21 99.63
cd06439251 CESA_like_1 CESA_like_1 is a member of the cellulo 99.61
cd02525249 Succinoglycan_BP_ExoA ExoA is involved in the bios 99.54
cd06436191 GlcNAc-1-P_transferase N-acetyl-glucosamine transf 99.41
TIGR03469384 HonB hopene-associated glycosyltransferase HpnB. T 99.4
cd06438183 EpsO_like EpsO protein participates in the methano 99.31
PF03142527 Chitin_synth_2: Chitin synthase; InterPro: IPR0048 99.2
cd04195201 GT2_AmsE_like GT2_AmsE_like is involved in exopoly 99.08
cd04184202 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot 99.02
cd06433202 GT_2_WfgS_like WfgS and WfeV are involved in O-ant 98.94
cd04186166 GT_2_like_c Subfamily of Glycosyltransferase Famil 98.93
cd02522221 GT_2_like_a GT_2_like_a represents a glycosyltrans 98.93
KOG2571862 consensus Chitin synthase/hyaluronan synthase (gly 98.9
cd02526237 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr 98.89
cd06420182 GT2_Chondriotin_Pol_N N-terminal domain of Chondro 98.84
cd02510299 pp-GalNAc-T pp-GalNAc-T initiates the formation of 98.82
cd06442224 DPM1_like DPM1_like represents putative enzymes si 98.74
PLN02726243 dolichyl-phosphate beta-D-mannosyltransferase 98.68
TIGR01556281 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids 98.65
PF10111281 Glyco_tranf_2_2: Glycosyltransferase like family 2 98.63
cd04196214 GT_2_like_d Subfamily of Glycosyltransferase Famil 98.61
cd06913219 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltran 98.6
cd04185202 GT_2_like_b Subfamily of Glycosyltransferase Famil 98.59
cd06423180 CESA_like CESA_like is the cellulose synthase supe 98.53
cd04188211 DPG_synthase DPG_synthase is involved in protein N 98.39
cd00761156 Glyco_tranf_GTA_type Glycosyltransferase family A 98.21
PRK10063248 putative glycosyl transferase; Provisional 98.15
COG1216305 Predicted glycosyltransferases [General function p 98.09
cd04179185 DPM_DPG-synthase_like DPM_DPG-synthase_like is a m 98.07
PRK10073328 putative glycosyl transferase; Provisional 98.05
PF00535169 Glycos_transf_2: Glycosyl transferase family 2; In 97.94
cd04187181 DPM1_like_bac Bacterial DPM1_like enzymes are rela 97.9
PRK10018279 putative glycosyl transferase; Provisional 97.79
PTZ00260333 dolichyl-phosphate beta-glucosyltransferase; Provi 97.41
KOG2547431 consensus Ceramide glucosyltransferase [Lipid tran 97.27
PRK13915306 putative glucosyl-3-phosphoglycerate synthase; Pro 97.17
PF02364 817 Glucan_synthase: 1,3-beta-glucan synthase componen 96.42
PRK10714325 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabi 96.38
cd02511229 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 94.26
cd00899219 b4GalT Beta-4-Galactosyltransferase is involved in 93.1
PF13712217 Glyco_tranf_2_5: Glycosyltransferase like family; 85.56
KOG2978238 consensus Dolichol-phosphate mannosyltransferase [ 83.52
PF0270978 Glyco_transf_7C: N-terminal domain of galactosyltr 83.07
cd02514334 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an es 80.22
>PLN02893 Cellulose synthase-like protein Back     alignment and domain information 
Probab=100.00  E-value=9.9e-119  Score=960.47  Aligned_cols=458  Identities=39%  Similarity=0.738  Sum_probs=429.5

Q ss_pred             CCccCCCCCCCCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCCCc
Q 012538            1 MAREKRPGCPHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNICKN   80 (461)
Q Consensus         1 v~Rekrp~~~~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~~~   80 (461)
                      |||||||+++||+||||||+++|+|+.+||||||+|+||||++|+|++++++||||+||+.++++|+||+||+|+|.+++
T Consensus       269 vsReKrp~~~Hh~KAGaLN~llrvS~~~TngpfIl~lDcD~y~n~p~~l~~amcff~Dp~~~~~vafVQfPQ~F~~i~~~  348 (734)
T PLN02893        269 VSREKSKNSPHHFKAGALNTLLRVSATMTNAPIILTLDCDMYSNDPQTPLRALCYLLDPSMDPKLGYVQFPQIFHGINKN  348 (734)
T ss_pred             EeCCCCCCCCcccccchHHHHHHhhcccCCCCEEEEecCCcCCCchhHHHHHHHHhcCCCcCCceEEEeCcccccCCCcC
Confidence            69999999999999999999999999999999999999999998999999999999999889999999999999999999


Q ss_pred             ccchhHHHHHHHHHHHHHhhcCCccccccceeEechhhcCCCCC--cccccc-c-cccCCCCcChHHHHHHhchhccccc
Q 012538           81 DLYANSYLVVNQVELAGIGSYDAALYCGTGCFHRRESLSGAKYP--KDYRNI-N-EAKNNDNRSVDELEKASKVLASCSY  156 (461)
Q Consensus        81 d~~~~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~~~~~--~~~~~~-~-~~~~~~~~~~~~~~~~a~~~~~c~y  156 (461)
                      |+|+|++++||+++++|+||++||+||||||+|||+||+|.+..  .+..++ . ......++.+++++++|++|+||.|
T Consensus       349 D~y~~~~~vff~~~~~glDG~~gp~y~GTGc~~RR~al~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~sC~y  428 (734)
T PLN02893        349 DIYAGELKRLFQINMIGMDGLAGPNYVGTGCFFRRRVFYGGPSSLILPEIPELNPDHLVDKSIKSQEVLALAHHVAGCNY  428 (734)
T ss_pred             CCCcchhHHHHHHHhhcccccCCceeeccceEEEHHHhcCCCccccchhhhhcccccccccccchHHHHHHhhhcccccc
Confidence            99999999999999999999999999999999999999987431  011110 0 1112345578889999999999999


Q ss_pred             ccccccccccCCCCCCccchHHHHHHHHhcCCeEEEeCCCCCceecccCCCHHHHHHhhhhhcchhHHHHHhhccccccc
Q 012538          157 EKNTHWGKEMGLVYGCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSKYCPFIYG  236 (461)
Q Consensus       157 e~~t~wg~~~G~~~~~vtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~~P~~l~~~~~Qr~RWa~G~lqi~~~~~~p~~~~  236 (461)
                      |++|.||+++||.|+|+|||++||++||++||||+||+|+++++.|++|+|+.++++||+||++|++||+++++||+++|
T Consensus       429 e~~t~WG~~~G~~ygsvtED~~Tg~~lh~~GWrSvY~~p~~~af~G~aP~~l~~~l~Q~~RWa~G~lqI~~s~~nPl~~g  508 (734)
T PLN02893        429 ENQTNWGSKMGFRYGSLVEDYYTGYRLQCEGWKSIFCNPKRPAFLGDSPINLHDVLNQQKRWSVGLLEVAFSKYSPITFG  508 (734)
T ss_pred             ccCCccccccceEeccccccHHHHHHHHhcCCcEEecCCCchhhccCCCCCHHHHHHHHHHHHhhhHHHHhhccCchhhc
Confidence            99999999999999999999999999999999999999877899999999999999999999999999999999999987


Q ss_pred             cCcccccchhhhhhhhhhhhhHHHHHHHHHHhHHhHhcCCccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCcccccc
Q 012538          237 HGKIKFGAQMGYCNYLLWAPLSLPTLFYVIVPPLCLGHGISLFPKVSSLWFIPFAYVFVAQNAYSICEALSCGHKLKSWW  316 (461)
Q Consensus       237 ~~~l~~~qrl~y~~~~~~~~~~~~~~~~~~~P~l~l~~g~~~~~~~~~~~~l~f~~~~~~~~~~~~l~~~~~G~~~~~ww  316 (461)
                      .++|++.||++|++.++|++.++|+++|+++|++||++|++++|+.+.+|+++|+++++++++++++|++++|.++++||
T Consensus       509 ~~~L~~~Qrl~Y~~~~~~~~~slp~liY~~~P~l~Ll~g~~i~p~~s~~~f~~yi~l~~s~~~~~~lE~~~sG~t~~~WW  588 (734)
T PLN02893        509 VKSIGLLMGLGYAHYAFWPIWSIPITIYAFLPQLALLNGVSIFPKASDPWFFLYIFLFLGAYGQDLLDFLLSGGTIQRWW  588 (734)
T ss_pred             ccCCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcccccccHHHHHHHHHHHHHHHHHHHHHHhccCccHhhhc
Confidence            78999999999999999999999999999999999999999999998999999998889999999999999999999999


Q ss_pred             chhhhHHHHHHHHHHHHHHHHHHHHhcCCccceEEecccccchhhhHHHhhhhhhcccchhHHHHHHHHHHHHHHHHHHH
Q 012538          317 NLQRMLIIRRTTAFFFGFVDCIVKQMGLSQTAFAITAKMVTEDVMERYEQEMMEFGSSSVMFTIVATLAMLNLFSLIGGF  396 (461)
Q Consensus       317 ~~qr~w~i~~~~~~~~~~~~~llk~l~~~~~~F~VT~K~~~~~~~~~~~~~~~~f~~~~p~~ip~~~l~~l~l~al~~g~  396 (461)
                      |+||+|+|.++++++++++++++|+||+++.+|+||+|+.+++++++|++|.|+|+.++|+++|+++++++|++|+++|+
T Consensus       589 n~qr~w~I~~~ss~l~a~l~~iLk~lg~s~~~F~VT~K~~~~~~~~~y~~~~f~f~~~spl~ip~ttl~llNl~a~v~Gi  668 (734)
T PLN02893        589 NDQRMWMIRGLSSFLFGLVEFLLKTLGISTFGFNVTSKVVDEEQSKRYEQGIFEFGVSSPMFLPLTTAAIINLVSFLWGI  668 (734)
T ss_pred             chheeeehHHHHHHHHHHHHHHHHHhcccCCceeecCCCcccccccccccceeeecccchhHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999988777889999999999889999999999999999999999


Q ss_pred             HHHhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeeehhhHHHHHHHhhcccc
Q 012538          397 IDIIFLDFGALGNLMCQIILCGLMVLVNVPIYEALFIRKDKGCMPFSVMFKSMFLASLACLLPY  460 (461)
Q Consensus       397 ~~~~~~~~~~~~~~~~~l~~~~~~v~~~~p~~~~l~~Rk~~~~~P~~~~~~s~~~~~~~~~~~~  460 (461)
                      ++++.+  +.++.+++|++||+|+|++++||++|++.|||||++|++++++|++|+.++|+++.
T Consensus       669 ~~~~~~--~~~~~~~~~~~~~~~~v~~~~P~~~gl~~r~dkg~~P~~v~~~s~~l~~~~~~~~~  730 (734)
T PLN02893        669 AQIFRQ--RNLEGLFLQMFLAGFAVVNCWPIYEAMVLRTDDGKLPVKITLISIVLAWALYLASS  730 (734)
T ss_pred             HHHHhC--CchhHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCccHHHHHHHHHHHHHHHHh
Confidence            999874  45788999999999999999999999999999999999999999999999998754

>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals Back     alignment and domain information
>PLN02189 cellulose synthase Back     alignment and domain information
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit Back     alignment and domain information
>PLN02400 cellulose synthase Back     alignment and domain information
>PLN02436 cellulose synthase A Back     alignment and domain information
>PLN02195 cellulose synthase A Back     alignment and domain information
>PLN02190 cellulose synthase-like protein Back     alignment and domain information
>PLN02248 cellulose synthase-like protein Back     alignment and domain information
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit Back     alignment and domain information
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional Back     alignment and domain information
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming) Back     alignment and domain information
>PRK05454 glucosyltransferase MdoH; Provisional Back     alignment and domain information
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan Back     alignment and domain information
>PRK14583 hmsR N-glycosyltransferase; Provisional Back     alignment and domain information
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK11204 N-glycosyltransferase; Provisional Back     alignment and domain information
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111 Back     alignment and domain information
>PRK14716 bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex Back     alignment and domain information
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase Back     alignment and domain information
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily Back     alignment and domain information
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2 Back     alignment and domain information
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A Back     alignment and domain information
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin Back     alignment and domain information
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan Back     alignment and domain information
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis Back     alignment and domain information
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI Back     alignment and domain information
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PF13506 Glyco_transf_21: Glycosyl transferase family 21 Back     alignment and domain information
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily Back     alignment and domain information
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan Back     alignment and domain information
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine Back     alignment and domain information
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB Back     alignment and domain information
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis Back     alignment and domain information
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2 Back     alignment and domain information
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis Back     alignment and domain information
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis Back     alignment and domain information
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis Back     alignment and domain information
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function Back     alignment and domain information
>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase Back     alignment and domain information
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase Back     alignment and domain information
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans Back     alignment and domain information
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1 Back     alignment and domain information
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase Back     alignment and domain information
>TIGR01556 rhamnosyltran L-rhamnosyltransferase Back     alignment and domain information
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ] Back     alignment and domain information
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine Back     alignment and domain information
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily Back     alignment and domain information
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation Back     alignment and domain information
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold Back     alignment and domain information
>PRK10063 putative glycosyl transferase; Provisional Back     alignment and domain information
>COG1216 Predicted glycosyltransferases [General function prediction only] Back     alignment and domain information
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily Back     alignment and domain information
>PRK10073 putative glycosyl transferase; Provisional Back     alignment and domain information
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1 Back     alignment and domain information
>PRK10018 putative glycosyl transferase; Provisional Back     alignment and domain information
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional Back     alignment and domain information
>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional Back     alignment and domain information
>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional Back     alignment and domain information
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide Back     alignment and domain information
>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids Back     alignment and domain information
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B Back     alignment and domain information
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only] Back     alignment and domain information
>PF02709 Glyco_transf_7C: N-terminal domain of galactosyltransferase; InterPro: IPR003859 This is a family of galactosyltransferases from a wide range of metazoa with three related galactosyltransferase activities; all three of which are possessed by one sequence in some cases Back     alignment and domain information
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query461
4hg6_A 802 Structure Of A Cellulose Synthase - Cellulose Trans 5e-07
>pdb|4HG6|A Chain A, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate Length = 802 Back     alignment and structure 
Iteration: 1

 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 60/129 (46%), Gaps = 9/129 (6%)
Query: 175 EDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSKYCPFI 234
           ED  T L I  RGWKS+Y   ++    G+ P T    + Q  RW+ GM Q+ L K   F 
Sbjct: 342 EDAETALEIHSRGWKSLYI--DRAMIAGLQPETFASFIQQRGRWATGMMQMLLLKNPLFR 399
Query: 235 YGHGKIKFGAQMGYCNYLLWAPLSLPTLFYVIVPPLCLGHGISLFPKV--SSLWFIP--F 290
            G G      ++ Y N + +    L  + +++ P + L  GI +F       L ++P   
Sbjct: 400 RGLG---IAQRLCYLNSMSFWFFPLVRMMFLVAPLIYLFFGIEIFVATFEEVLAYMPGYL 456
Query: 291 AYVFVAQNA 299
           A  F+ QNA
Sbjct: 457 AVSFLVQNA 465

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query461
4hg6_A 802 Cellulose synthase subunit A; membrane translocati 100.0
2z86_A625 Chondroitin synthase; GT-A, glycosyltransferase A, 99.05
3bcv_A240 Putative glycosyltransferase protein; protein stru 98.97
1xhb_A472 Polypeptide N-acetylgalactosaminyltransferase 1; g 98.91
1qg8_A255 Protein (spore coat polysaccharide biosynthesis P 98.82
2z86_A625 Chondroitin synthase; GT-A, glycosyltransferase A, 98.75
2ffu_A501 Ppgalnact-2, polypeptide N-acetylgalactosaminyltra 98.75
2d7i_A570 Polypeptide N-acetylgalactosaminyltransferase 10; 98.74
2fy7_A287 Beta-1,4-galactosyltransferase 1; M339H mutant, AP 98.63
3ckj_A329 Putative uncharacterized protein; mycobacteria, un 98.48
4fix_A657 UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 98.33
3l7i_A 729 Teichoic acid biosynthesis protein F; GT-B fold, m 98.17
2nxv_A249 ATP synthase subunits region ORF 6; majastridin, A 98.05
3f1y_A387 Mannosyl-3-phosphoglycerate synthase; GT-A type gl 97.71
2bo4_A397 Mannosylglycerate synthase; catalysis, glycosyltra 96.18
3lw6_A287 FI08434P, beta-4-galactosyltransferase 7; protein- 84.8
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides} Back     alignment and structure
Probab=100.00  E-value=7.2e-40  Score=366.15  Aligned_cols=354  Identities=20%  Similarity=0.289  Sum_probs=278.9

Q ss_pred             CCCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhh-cccCCCcEEEEecCcccccCCCc-------c
Q 012538           10 PHNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLL-DEKREHEIAFVQHPQRFDNICKN-------D   81 (461)
Q Consensus        10 ~~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~-d~~~~~~va~VQ~pq~f~n~~~~-------d   81 (461)
                      ++++|++|+|.|++.    +++|||+++|||+++ +||++++++.+|. ||    +++.||+|+.+.|.++.       .
T Consensus       222 ~~~GKa~alN~gl~~----a~gd~Il~lDaD~~~-~pd~L~~lv~~~~~dp----~v~~V~~~~~~~~~~~~~~~~~~~~  292 (802)
T 4hg6_A          222 NEHAKAGNMSAALER----LKGELVVVFDADHVP-SRDFLARTVGYFVEDP----DLFLVQTPHFFINPDPIQRNLALGD  292 (802)
T ss_dssp             CCSHHHHHHHHHHHH----CCCSEEEECCTTEEE-CTTHHHHHHHHHHHSS----SCCEEECCCCBSSCCHHHHHHTCCT
T ss_pred             CCCcchHHHHHHHHh----cCCCEEEEECCCCCc-ChHHHHHHHHHHhcCC----CeEEEeccEEEeCCchHhhhhhHHh
Confidence            567999999999998    899999999999999 7999999999995 55    79999999999886521       2


Q ss_pred             cchhHHHHHHHHHHHHHhhcCCccccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchhcccccccccc
Q 012538           82 LYANSYLVVNQVELAGIGSYDAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVLASCSYEKNTH  161 (461)
Q Consensus        82 ~~~~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~  161 (461)
                      .+.++...+++..+.+.+.+++++++|+++++||+++++.                                        
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~v----------------------------------------  332 (802)
T 4hg6_A          293 RCPPENEMFYGKIHRGLDRWGGAFFCGSAAVLRRRALDEA----------------------------------------  332 (802)
T ss_dssp             TSCCTTHHHHHTHHHHHHHTTCCCCCSSSEEEEHHHHHHH----------------------------------------
T ss_pred             hhhHHHHHHHHHHHhhHhhcCCceecccchhhhHHHHHHc----------------------------------------
Confidence            2334567788899999999999999999999999999752                                        


Q ss_pred             cccccCCCCCCccchHHHHHHHHhcCCeEEEeCCCCCceecccCCCHHHHHHhhhhhcchhHHHHHhhccccccccCccc
Q 012538          162 WGKEMGLVYGCAAEDVVTGLTIQCRGWKSMYFKPNKPAFLGVAPVTLDIALVQMKRWSEGMFQIFLSKYCPFIYGHGKIK  241 (461)
Q Consensus       162 wg~~~G~~~~~vtED~~t~~~l~~~Gwrs~y~~~~~~~~~g~~P~~l~~~~~Qr~RWa~G~lqi~~~~~~p~~~~~~~l~  241 (461)
                          |||++++++||.+++.+++++||+++|+++  +.+++++|+|+.++++||.||++|.+|+++.+ +|++  .++++
T Consensus       333 ----Ggf~~~~~~ED~~l~~rl~~~G~ri~~~~~--~~~~~~~p~t~~~~~~Qr~RW~~G~~q~l~~~-~pl~--~~~l~  403 (802)
T 4hg6_A          333 ----GGFAGETITEDAETALEIHSRGWKSLYIDR--AMIAGLQPETFASFIQQRGRWATGMMQMLLLK-NPLF--RRGLG  403 (802)
T ss_dssp             ----TTCCCSSSSHHHHHHHHHHTTTCCEEECCC--CCEEECCCCSHHHHHHHHHHHHHHHHHHHHHS-CTTS--CSSCC
T ss_pred             ----CCcCCCCcchHHHHHHHHHHcCCeEEEecC--CEEEecCCCCHHHHHHHHHHHHccHHHHHHHh-Cccc--cCCCC
Confidence                899999999999999999999999999976  46789999999999999999999999999876 7876  57899


Q ss_pred             ccchhhhhhhhhhhhhHHHHHHHHHHhHHhHhcCCccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCccccccchhhh
Q 012538          242 FGAQMGYCNYLLWAPLSLPTLFYVIVPPLCLGHGISLFPKVSSLWFIPFAYVFVAQNAYSICEALSCGHKLKSWWNLQRM  321 (461)
Q Consensus       242 ~~qrl~y~~~~~~~~~~~~~~~~~~~P~l~l~~g~~~~~~~~~~~~l~f~~~~~~~~~~~~l~~~~~G~~~~~ww~~qr~  321 (461)
                      +.+|++|+....+++.+++.++++++|+++++++.+++......++..++..++.   ..++.....|.....||..   
T Consensus       404 ~~~rl~~l~~~~~~~~~~~~li~ll~p~~~ll~~~~~~~~~~~~~~~~~lp~~l~---~~~~~~~~~~~~r~~~~~~---  477 (802)
T 4hg6_A          404 IAQRLCYLNSMSFWFFPLVRMMFLVAPLIYLFFGIEIFVATFEEVLAYMPGYLAV---SFLVQNALFARQRWPLVSE---  477 (802)
T ss_dssp             HHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHCCCCSCCCHHHHHHHHHHHHHH---HHHHHHHHHTTTSCTTHHH---
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHH---HHHHHHHHhcCcHHHHHHH---
Confidence            9999999999999999999999999999999999988876433332222211111   1111111223333345543   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCccceEEecccccchhhhHHHhhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 012538          322 LIIRRTTAFFFGFVDCIVKQMGLSQTAFAITAKMVTEDVMERYEQEMMEFGSSSVMFTIVATLAMLNLFSLIGGFIDIIF  401 (461)
Q Consensus       322 w~i~~~~~~~~~~~~~llk~l~~~~~~F~VT~K~~~~~~~~~~~~~~~~f~~~~p~~ip~~~l~~l~l~al~~g~~~~~~  401 (461)
                        +..+...++.+...+..++++++.+|+||+|+...+..         +  .++++.|+.++++++++++++|+++...
T Consensus       478 --l~~~~~~~~~~~a~l~~l~~~~~~~f~VT~Kg~~~~~~---------~--~~~~~~p~~~~~~l~~~~~~~~~~~~~~  544 (802)
T 4hg6_A          478 --VYEVAQAPYLARAIVTTLLRPRSARFAVTAKDETLSEN---------Y--ISPIYRPLLFTFLLCLSGVLATLVRWVA  544 (802)
T ss_dssp             --HHHHHHHHHHHHHHHHHHHSTTCCCCCCCCCCCCCSSC---------C--BCTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             --HHHHHHHHHHHHHHHHHHhCCCCCcceECCCCcccccc---------c--hhhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence              33444445555555666778899999999998754321         1  1366788888999999999999999875


Q ss_pred             cccCchhHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCC
Q 012538          402 LDFGALGNLMCQIILCGLMVLVNVPIYEALFIRKDKGCMP  441 (461)
Q Consensus       402 ~~~~~~~~~~~~l~~~~~~v~~~~p~~~~l~~Rk~~~~~P  441 (461)
                      . ........++++|+.++++.+.+.+.....|+++++.|
T Consensus       545 ~-~~~~~~~~~~~~w~~~~l~~l~~~~~~~~~~~~~R~~~  583 (802)
T 4hg6_A          545 F-PGDRSVLLVVGGWAVLNVLLVGFALRAVAEKQQRRAAP  583 (802)
T ss_dssp             C-GGGHHHHHHHHHHHHHHHHHHHHHHTTTBCCCCSCCCC
T ss_pred             c-CCccchhhhhhHHHHHHHHHHHHHHHHHhcCCCccccc
Confidence            3 22345567889999999999999888888887776544
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis} Back     alignment and structure
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 Back     alignment and structure
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A* Back     alignment and structure
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* Back     alignment and structure
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* Back     alignment and structure
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ... Back     alignment and structure
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A Back     alignment and structure
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A* Back     alignment and structure
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* Back     alignment and structure
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A* Back     alignment and structure
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A* Back     alignment and structure
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A* Back     alignment and structure
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query461
d1xhba2328 Polypeptide N-acetylgalactosaminyltransferase 1, N 98.93
d1qg8a_255 Spore coat polysaccharide biosynthesis protein Sps 98.13
d1omza_265 Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga 96.87
d2bo4a1381 Mannosylglycerate synthase, MGS {Rhodothermus mari 83.77
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.93  E-value=2.6e-10  Score=110.87  Aligned_cols=132  Identities=14%  Similarity=-0.006  Sum_probs=86.4

Q ss_pred             CCChHHHHHHHHHhccccCCCCEEEEeCCCCCcCchHHHHHHHHHhhcccCCCcEEEEecCcccccCC-------Cc---
Q 012538           11 HNFKAGAMNALIRVSSVISNGPVILNLDCDMYANDGDAIREALCFLLDEKREHEIAFVQHPQRFDNIC-------KN---   80 (461)
Q Consensus        11 ~~~KAGaLN~~l~~~~~~s~~~~il~lDaD~~~~~p~~l~~~~~~f~d~~~~~~va~VQ~pq~f~n~~-------~~---   80 (461)
                      ..++++|.|.|++.    ++||||+.+|+|.++ +|++|++++.+|.+..   . +.|..+....+.+       ..   
T Consensus        92 n~G~~~a~N~Gi~~----a~gd~i~flD~D~~~-~p~~l~~l~~~~~~~~---~-~~v~~~~~~i~~~~~~~~~~~~~~~  162 (328)
T d1xhba2          92 RSGLIRARLKGAAV----SRGQVITFLDAHCEC-TAGWLEPLLARIKHDR---R-TVVCPIIDVISDDTFEYMAGSDMTY  162 (328)
T ss_dssp             CCCHHHHHHHHHHH----CCSSEEEEEESSEEE-CTTCHHHHHHHHHHCT---T-EEEEEEEEEECSSSCCEECCCTTEE
T ss_pred             cccchHHHHHHHHh----hhcceeeecCccccc-ChhHHHHHHHHHhcCC---C-eEEecceeeeccCceeeccCCcccc
Confidence            45799999999998    899999999999999 8999999999998642   2 2232222111110       00   


Q ss_pred             ccchhH-----HHHHHHHHHHHHhhc----CCccccccceeEechhhcCCCCCccccccccccCCCCcChHHHHHHhchh
Q 012538           81 DLYANS-----YLVVNQVELAGIGSY----DAALYCGTGCFHRRESLSGAKYPKDYRNINEAKNNDNRSVDELEKASKVL  151 (461)
Q Consensus        81 d~~~~~-----~~~f~~~~~~g~~~~----~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~  151 (461)
                      ..+...     ...............    ..+..+|++.++||+++..+                              
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~f~~v------------------------------  212 (328)
T d1xhba2         163 GGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEI------------------------------  212 (328)
T ss_dssp             EEECTTCCEEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHHT------------------------------
T ss_pred             ccccccccccccccchhhhhccccccccccccceecceeeeeeHHHHHHh------------------------------
Confidence            000000     000000011111111    22345788888999999754                              


Q ss_pred             cccccccccccccccCCCCCCc---cchHHHHHHHHhcCCeEEEeCC
Q 012538          152 ASCSYEKNTHWGKEMGLVYGCA---AEDVVTGLTIQCRGWKSMYFKP  195 (461)
Q Consensus       152 ~~c~ye~~t~wg~~~G~~~~~v---tED~~t~~~l~~~Gwrs~y~~~  195 (461)
                                    |||+++..   .||++.++|+..+||++.|+|.
T Consensus       213 --------------GgfDe~~~~~g~ED~Dl~~R~~~~G~~i~~~p~  245 (328)
T d1xhba2         213 --------------GTYDAGMDIWGGENLEISFRIWQCGGTLEIVTC  245 (328)
T ss_dssp             --------------TSCCTTSCTTCCCCSHHHHHHHHTTCEEEEEEE
T ss_pred             --------------CCCCCCCcCcCchHHHHHHHHHHhCCeEEEeCC
Confidence                          88987653   5999999999999999999874
>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]} Back     information, alignment and structure