Citrus Sinensis ID: 012587
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 460 | 2.2.26 [Sep-21-2011] | |||||||
| Q9ZWJ3 | 481 | UDP-glycosyltransferase 8 | yes | no | 0.947 | 0.906 | 0.406 | 4e-92 | |
| Q9LMF1 | 488 | UDP-glycosyltransferase 8 | no | no | 0.952 | 0.897 | 0.389 | 1e-88 | |
| Q9SK82 | 489 | UDP-glycosyltransferase 8 | no | no | 0.945 | 0.889 | 0.393 | 1e-88 | |
| Q9LME8 | 487 | UDP-glycosyltransferase 8 | no | no | 0.941 | 0.889 | 0.382 | 1e-84 | |
| Q9LMF0 | 479 | UDP-glycosyltransferase 8 | no | no | 0.952 | 0.914 | 0.373 | 8e-82 | |
| Q9M9E7 | 489 | UDP-glycosyltransferase 8 | no | no | 0.952 | 0.895 | 0.367 | 2e-78 | |
| Q9SBL1 | 492 | Cyanohydrin beta-glucosyl | N/A | no | 0.958 | 0.896 | 0.336 | 2e-66 | |
| Q9LTH3 | 453 | UDP-glycosyltransferase 7 | no | no | 0.921 | 0.935 | 0.347 | 4e-66 | |
| Q94AB5 | 458 | UDP-glycosyltransferase 7 | no | no | 0.932 | 0.936 | 0.356 | 1e-63 | |
| Q9LTH2 | 449 | UDP-glycosyltransferase 7 | no | no | 0.919 | 0.942 | 0.361 | 2e-63 |
| >sp|Q9ZWJ3|U85A2_ARATH UDP-glycosyltransferase 85A2 OS=Arabidopsis thaliana GN=UGT85A2 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 338 bits (868), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 193/475 (40%), Positives = 276/475 (58%), Gaps = 39/475 (8%)
Query: 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQ 67
HV +P PA GH+N M+ +A+LL G ITF+NT + ++R++R S + +P F+
Sbjct: 10 HVVCVPYPAQGHINPMMKVAKLLYAKGFHITFVNTVYNHNRLLR--SRGPNAVDGLPSFR 67
Query: 68 FKTLTDGLPRDHPRTPDKFPELVDSL--NCATP--PLLKEM-VSDSKSPVNCIITDGYMS 122
F+++ DGLP P L +S +C P LL+++ D PV+CI++DG MS
Sbjct: 68 FESIPDGLPETDVDVTQDIPTLCESTMKHCLAPFKELLRQINARDDVPPVSCIVSDGCMS 127
Query: 123 RAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELPIKG----------------- 165
+DAA E+GV + F T SAC F ++ I+ G PIK
Sbjct: 128 FTLDAAEELGVPEVLFWTTSACGFLAYLYYYRFIEKGLSPIKDESYLTKEHLDTKIDWIP 187
Query: 166 ---FLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHS 222
LR +D+PSF R +P D L RE + A +ILNTF+DLE ++ +++
Sbjct: 188 SMKNLRLKDIPSFIRTTNPDDIMLNFIIREADRAKRASAIILNTFDDLEHDVIQSMKS-I 246
Query: 223 CPNIYSIGPLNAHLKVRIPEKTYS-----SSSLWKIDRSCMAWLDKQPKQSVIYVSFGSI 277
P +YSIGPL HL + YS S+LW+ + C+ WL+ + + SV+YV+FGSI
Sbjct: 247 VPPVYSIGPL--HLLEKQESGEYSEIGRTGSNLWREETECLDWLNTKARNSVVYVNFGSI 304
Query: 278 AVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQ 337
V+S QL+EF +GL + K FLWVIRPDL++G E +P E L AT +R +A W PQ
Sbjct: 305 TVLSAKQLVEFAWGLAATGKEFLWVIRPDLVAGD--EAMVPPEFLTATADRRMLASWCPQ 362
Query: 338 EEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDL 397
E+VL+H A+GGFLTHCGWNSTLES+ G+PM+CWP FA+QQ N +F + W++G++I
Sbjct: 363 EKVLSHPAIGGFLTHCGWNSTLESLCGGVPMVCWPFFAEQQTNCKFSRDEWEVGIEIGGD 422
Query: 398 CDRNIVEKAVNDLMVERKEEFM-ESADRMANLAKKSV-NKGGSSYCNLDRLVNDI 450
R VE V +LM E K + M E A+ LA ++ +K GSS N + LVN +
Sbjct: 423 VKREEVEAVVRELMDEEKGKNMREKAEEWRRLANEATEHKHGSSKLNFEMLVNKV 477
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Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: - |
| >sp|Q9LMF1|U85A3_ARATH UDP-glycosyltransferase 85A3 OS=Arabidopsis thaliana GN=UGT85A3 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 327 bits (839), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 184/473 (38%), Positives = 273/473 (57%), Gaps = 35/473 (7%)
Query: 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQ 67
HV +P PA GH+N M+ +A+LL G +TF+NT + ++R++R S + +P FQ
Sbjct: 13 HVVCVPYPAQGHINPMMKVAKLLHVKGFHVTFVNTVYNHNRLLR--SRGANALDGLPSFQ 70
Query: 68 FKTLTDGLPRDHPRTPDKFPELVDSL--NCATP--PLLKEMVS-DSKSPVNCIITDGYMS 122
F+++ DGLP P L +S NC P LL+ +V+ + PV+CI++DG MS
Sbjct: 71 FESIPDGLPETGVDATQDIPALSESTTKNCLVPFKKLLQRIVTREDVPPVSCIVSDGSMS 130
Query: 123 RAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELPIK------------------ 164
+D A E+GV I+F T SAC F ++ I+ G P+K
Sbjct: 131 FTLDVAEELGVPEIHFWTTSACGFMAYLHFYLFIEKGLCPVKDASCLTKEYLDTVIDWIP 190
Query: 165 --GFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHS 222
++ +D+PSF R +P D L RE + A +ILNTF+DLE I+ +++
Sbjct: 191 SMNNVKLKDIPSFIRTTNPNDIMLNFVVREACRTKRASAIILNTFDDLEHDIIQSMQS-I 249
Query: 223 CPNIYSIGPLNAHLKVRIPEKT---YSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAV 279
P +Y IGPL+ + I E + S+LWK + C+ WL+ + + SV+YV+FGSI +
Sbjct: 250 LPPVYPIGPLHLLVNREIEEDSEIGRMGSNLWKEETECLGWLNTKSRNSVVYVNFGSITI 309
Query: 280 MSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEE 339
M+ QL+EF +GL + K FLWV+RPD ++G+ E IP+E L T +R + W PQE+
Sbjct: 310 MTTAQLLEFAWGLAATGKEFLWVMRPDSVAGE--EAVIPKEFLAETADRRMLTSWCPQEK 367
Query: 340 VLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCD 399
VL+H AVGGFLTHCGWNSTLES+ G+PM+CWP FA+QQ N +F + W++G++I
Sbjct: 368 VLSHPAVGGFLTHCGWNSTLESLSCGVPMVCWPFFAEQQTNCKFSCDEWEVGIEIGGDVK 427
Query: 400 RNIVEKAVNDLM-VERKEEFMESADRMANLAKKSVN-KGGSSYCNLDRLVNDI 450
R VE V +LM E+ ++ E A LA+K+ GSS N + +VN +
Sbjct: 428 RGEVEAVVRELMDGEKGKKMREKAVEWRRLAEKATKLPCGSSVINFETIVNKV 480
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q9SK82|U85A1_ARATH UDP-glycosyltransferase 85A1 OS=Arabidopsis thaliana GN=UGT85A1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 327 bits (838), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 186/473 (39%), Positives = 274/473 (57%), Gaps = 38/473 (8%)
Query: 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIR-HSSDAFSRYMQIPGF 66
HV +P PA GH+N M+ +A+LL G +TF+NT + ++R +R S+A +P F
Sbjct: 13 HVVCVPYPAQGHINPMMRVAKLLHARGFYVTFVNTVYNHNRFLRSRGSNALD---GLPSF 69
Query: 67 QFKTLTDGLPRDHPRTPDKFPELVDSL--NCATP--PLLKEM-VSDSKSPVNCIITDGYM 121
+F+++ DGLP L +S NC P LL+ + D+ PV+CI++DG M
Sbjct: 70 RFESIADGLPETDMDATQDITALCESTMKNCLAPFRELLQRINAGDNVPPVSCIVSDGCM 129
Query: 122 SRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELPIKG---------------- 165
S +D A E+GV + F T S CAF ++ I+ G P+K
Sbjct: 130 SFTLDVAEELGVPEVLFWTTSGCAFLAYLHFYLFIEKGLCPLKDESYLTKEYLEDTVIDF 189
Query: 166 -----FLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRN 220
++ +D+PSF R +P D + RET + A +ILNTF+DLE ++ +++
Sbjct: 190 IPTMKNVKLKDIPSFIRTTNPDDVMISFALRETERAKRASAIILNTFDDLEHDVVHAMQS 249
Query: 221 HSCPNIYSIGPLNAHLKVRIPEKT---YSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSI 277
P +YS+GPL+ I E + SS+LWK + C+ WLD + + SVIY++FGSI
Sbjct: 250 -ILPPVYSVGPLHLLANREIEEGSEIGMMSSNLWKEEMECLDWLDTKTQNSVIYINFGSI 308
Query: 278 AVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQ 337
V+S QL+EF +GL S K FLWVIRPDL++G+ E +P + L TK+R +A W PQ
Sbjct: 309 TVLSVKQLVEFAWGLAGSGKEFLWVIRPDLVAGE--EAMVPPDFLMETKDRSMLASWCPQ 366
Query: 338 EEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDL 397
E+VL+H A+GGFLTHCGWNS LES+ G+PM+CWP FADQQ+N +F + W +G++I
Sbjct: 367 EKVLSHPAIGGFLTHCGWNSILESLSCGVPMVCWPFFADQQMNCKFCCDEWDVGIEIGGD 426
Query: 398 CDRNIVEKAVNDLM-VERKEEFMESADRMANLAKKSV-NKGGSSYCNLDRLVN 448
R VE V +LM E+ ++ E A LA+K+ +K GSS N + +V+
Sbjct: 427 VKREEVEAVVRELMDGEKGKKMREKAVEWQRLAEKATEHKLGSSVMNFETVVS 479
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Involved in the O-glucosylation of trans-zeatin and dihydrozeatin. Also active in vitro on cis-zeatin. Not active on N-glucosylated substrates. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q9LME8|U85A7_ARATH UDP-glycosyltransferase 85A7 OS=Arabidopsis thaliana GN=UGT85A7 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 314 bits (804), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 183/479 (38%), Positives = 270/479 (56%), Gaps = 46/479 (9%)
Query: 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIR----HSSDAFSRYMQI 63
HV +P PA GH+N ML +A+LL G +TF+NT + ++R++R ++ D F
Sbjct: 13 HVVCVPYPAQGHINPMLKVAKLLYAKGFHVTFVNTLYNHNRLLRSRGPNALDGF------ 66
Query: 64 PGFQFKTLTDGLPRDHPRTPDKFPELVDSL--NCATPPLLKEMV-----SDSKSPVNCII 116
P F+F+++ DGLP P + S+ NC P KE++ D PV+CI+
Sbjct: 67 PSFRFESIPDGLPETDGDRTQHTPTVCMSIEKNCLAP--FKEILRRINDKDDVPPVSCIV 124
Query: 117 TDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELPIK------------ 164
+DG MS +DAA E+GV + F T SAC F + I+ G P K
Sbjct: 125 SDGVMSFTLDAAEELGVPEVIFWTNSACGFMTILHFYLFIEKGLSPFKDESYMSKEHLDT 184
Query: 165 --------GFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILS 216
LR +D+PS+ R +P + L RE S A +ILNTF++LE ++
Sbjct: 185 VIDWIPSMKNLRLKDIPSYIRTTNPDNIMLNFLIREVERSKRASAIILNTFDELEHDVIQ 244
Query: 217 QIRNHSCPNIYSIGPLNAHLKVRIPEKTYSSS---SLWKIDRSCMAWLDKQPKQSVIYVS 273
+++ P +YSIGPL+ +K I E + +LW+ + C+ WLD + SV++V+
Sbjct: 245 SMQS-ILPPVYSIGPLHLLVKEEINEASEIGQMGLNLWREEMECLDWLDTKTPNSVLFVN 303
Query: 274 FGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAG 333
FG I VMS QL EF +GL S+K FLWVIRP+L+ G + +P+E L T +R +A
Sbjct: 304 FGCITVMSAKQLEEFAWGLAASRKEFLWVIRPNLVVG-EAMVVLPQEFLAETIDRRMLAS 362
Query: 334 WVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLD 393
W PQE+VL+H A+GGFLTHCGWNSTLES+ G+PMICWP F++Q N +F + W +G++
Sbjct: 363 WCPQEKVLSHPAIGGFLTHCGWNSTLESLAGGVPMICWPCFSEQPTNCKFCCDEWGVGIE 422
Query: 394 IKDLCDRNIVEKAVNDLM-VERKEEFMESADRMANLAKKSVN-KGGSSYCNLDRLVNDI 450
I R VE V +LM E+ ++ E A+ LA+++ K GSS NL+ L++ +
Sbjct: 423 IGKDVKREEVETVVRELMDGEKGKKLREKAEEWRRLAEEATRYKHGSSVMNLETLIHKV 481
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q9LMF0|U85A5_ARATH UDP-glycosyltransferase 85A5 OS=Arabidopsis thaliana GN=UGT85A5 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 304 bits (779), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 175/468 (37%), Positives = 267/468 (57%), Gaps = 30/468 (6%)
Query: 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQ 67
HV +P PA GH+N ML +A+LL G +TF+NT + ++R+IR S + +P F+
Sbjct: 13 HVVCIPFPAQGHINPMLKVAKLLYARGFHVTFVNTNYNHNRLIR--SRGPNSLDGLPSFR 70
Query: 68 FKTLTDGLPRDHPRTPDKFPELVDSL--NCATP--PLLKEM-VSDSKSPVNCIITDGYMS 122
F+++ DGLP ++ P L +S NC P LL+ + + PV+CI++DG MS
Sbjct: 71 FESIPDGLPEENKDVMQDVPTLCESTMKNCLAPFKELLRRINTTKDVPPVSCIVSDGVMS 130
Query: 123 RAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELPIKG---------------FL 167
+DAA E+GV + F T SAC F ++ I+ G PIK L
Sbjct: 131 FTLDAAEELGVPDVLFWTPSACGFLAYLHFYRFIEKGLSPIKDESSLDTKINWIPSMKNL 190
Query: 168 RCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPNIY 227
+D+PSF R + D L F E + A +ILNTF+ LE ++ I++ P +Y
Sbjct: 191 GLKDIPSFIRATNTEDIMLNFFVHEADRAKRASAIILNTFDSLEHDVVRSIQS-IIPQVY 249
Query: 228 SIGPLNAHLKVRIPEKT---YSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQ 284
+IGPL+ + I E++ +++W+ + C+ WLD + SV+YV+FGSI VMS Q
Sbjct: 250 TIGPLHLFVNRDIDEESDIGQIGTNMWREEMECLDWLDTKSPNSVVYVNFGSITVMSAKQ 309
Query: 285 LIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHS 344
L+EF +GL +KK FLWVIRPDL++G +P + L T R +A W PQE+VL+H
Sbjct: 310 LVEFAWGLAATKKDFLWVIRPDLVAGD--VPMLPPDFLIETANRRMLASWCPQEKVLSHP 367
Query: 345 AVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDI-KDLCDRNIV 403
AVGGFLTH GWNSTLES+ G+PM+CWP FA+QQ N ++ + W++G++I D+ +
Sbjct: 368 AVGGFLTHSGWNSTLESLSGGVPMVCWPFFAEQQTNCKYCCDEWEVGMEIGGDVRREEVE 427
Query: 404 EKAVNDLMVERKEEFMESADRMANLAKKSVNK-GGSSYCNLDRLVNDI 450
E + ++ ++ + A+ LA+++ GSS N +V+ +
Sbjct: 428 ELVRELMDGDKGKKMRQKAEEWQRLAEEATKPIYGSSELNFQMVVDKV 475
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q9M9E7|U85A4_ARATH UDP-glycosyltransferase 85A4 OS=Arabidopsis thaliana GN=UGT85A4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 293 bits (750), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 174/473 (36%), Positives = 256/473 (54%), Gaps = 35/473 (7%)
Query: 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQ 67
H +P PA GH+N ML LA+LL G +TF+NT++ + R+++ S +P F+
Sbjct: 13 HAMCIPYPAQGHINPMLKLAKLLHARGFHVTFVNTDYNHRRILQ--SRGPHALNGLPSFR 70
Query: 68 FKTLTDGLPRDHPRTPDKFPELVDSL--NCATP--PLLKEMVSDSK-SPVNCIITDGYMS 122
F+T+ DGLP +L+DS NC P L+ + S S PV+CII+D MS
Sbjct: 71 FETIPDGLPWTDVDAKQDMLKLIDSTINNCLAPFKDLILRLNSGSDIPPVSCIISDASMS 130
Query: 123 RAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELPIKGF---------------- 166
IDAA E+ + ++ T SA A + +I+ +P+K
Sbjct: 131 FTIDAAEELKIPVVLLWTNSATALILYLHYQKLIEKEIIPLKDSSDLKKHLETEIDWIPS 190
Query: 167 ---LRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSC 223
++ +D P F +P DP + T A + +NTFE LE +L +R+
Sbjct: 191 MKKIKLKDFPDFVTTTNPQDPMISFILHVTGRIKRASAIFINTFEKLEHNVLLSLRS-LL 249
Query: 224 PNIYSIGPLNAHLKVRIPEKTYSSS---SLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVM 280
P IYS+GP I + + +LW+ + + WLD + +++VIYV+FGS+ V+
Sbjct: 250 PQIYSVGPFQILENREIDKNSEIRKLGLNLWEEETESLDWLDTKAEKAVIYVNFGSLTVL 309
Query: 281 SRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERG-CIAGWVPQEE 339
+ +Q++EF +GL S K FLWV+R ++ G D + +P E L TK RG I GW QE+
Sbjct: 310 TSEQILEFAWGLARSGKEFLWVVRSGMVDGDD--SILPAEFLSETKNRGMLIKGWCSQEK 367
Query: 340 VLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCD 399
VL+H A+GGFLTHCGWNSTLES+ AG+PMICWP FADQ N +F E W +G++I +
Sbjct: 368 VLSHPAIGGFLTHCGWNSTLESLYAGVPMICWPFFADQLTNRKFCCEDWGIGMEIGEEVK 427
Query: 400 RNIVEKAVNDLM-VERKEEFMESADRMANLAKK-SVNKGGSSYCNLDRLVNDI 450
R VE V +LM E+ + E LA++ S GSSY N + +VN +
Sbjct: 428 RERVETVVKELMDGEKGKRLREKVVEWRRLAEEASAPPLGSSYVNFETVVNKV 480
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q9SBL1|HMNGT_SORBI Cyanohydrin beta-glucosyltransferase OS=Sorghum bicolor GN=UGT85B1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 253 bits (646), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 164/488 (33%), Positives = 253/488 (51%), Gaps = 47/488 (9%)
Query: 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSR--YMQIPG 65
HV ++P P GHV ++ LA LL G ++TF+ T++ Y R++R +A R
Sbjct: 12 HVVLVPFPGQGHVAPLMQLARLLHARGARVTFVYTQYNYRRLLRAKGEAAVRPPATSSAR 71
Query: 66 FQFKTLTDGLPRDHPRTPDKFPELVDSL--NCATP------PLLKEMVSDSKSPVNCIIT 117
F+ + + DGL P+ + LVDSL NC P L +E+ PV C++
Sbjct: 72 FRIEVIDDGLSLSVPQ--NDVGGLVDSLRKNCLHPFRALLRRLGQEVEGQDAPPVTCVVG 129
Query: 118 DGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELPIK------------- 164
D M+ A AARE G+ + F T SAC + ++++ G +P +
Sbjct: 130 DVVMTFAAAAAREAGIPEVQFFTASACGLLGYLHYGELVERGLVPFRDASLLADDDYLDT 189
Query: 165 --------GFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILS 216
+R RD+P+FCR DP D + ++ +A + LILNT +LE ++
Sbjct: 190 PLEWVPGMSHMRLRDMPTFCRTTDPDDVMVSATLQQMESAAGSKALILNTLYELEKDVVD 249
Query: 217 QIRNHSCPNIYSIGPLNAHLKVRIPEKTYSSS------SLWKIDRSCMAWLDKQPKQSVI 270
+ P IY++GPL +V + S+ S+W+ D C++WLD +P SV+
Sbjct: 250 ALAAF-FPPIYTVGPLA---EVIASSDSASAGLAAMDISIWQEDTRCLSWLDGKPAGSVV 305
Query: 271 YVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELL-EATKERG 329
YV+FGS+AVM+ Q EF GL FLWV RPD++ G+ E +PE LL E + RG
Sbjct: 306 YVNFGSMAVMTAAQAREFALGLASCGSPFLWVKRPDVVEGE--EVLLPEALLDEVARGRG 363
Query: 330 CIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWK 389
+ W PQ VL H+AVG F++HCGWNS LE+ AG P++ WP +Q N R + EVW
Sbjct: 364 LVVPWCPQAAVLKHAAVGLFVSHCGWNSLLEATAAGQPVLAWPCHGEQTTNCRQLCEVWG 423
Query: 390 LGLDIKDLCDRNIVEKAVNDLMV-ERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVN 448
G + + V + V ++MV + +E A A+ + KGG+S+ N++R+VN
Sbjct: 424 NGAQLPREVESGAVARLVREMMVGDLGKEKRAKAAEWKAAAEAAARKGGASWRNVERVVN 483
Query: 449 DIKMMSSQ 456
D+ ++ +
Sbjct: 484 DLLLVGGK 491
|
Involved in the biosynthesis of the cyanogenic glucoside dhurrin. Prevents the disocciation and release of toxic hydrogen cyanide. Mandelonitrile, p-hydroxymandelonitrile, benzyl alcohol, benzoic acid and geraniol, but not hydroquinone(1,4-benzenediol), alpha-terpinol, linalool or farnesol are utilized as acceptor substrates. UDP-glucose, but not UDP-xylose or UDP-glucuronic acid can be used as sugar donor. Sorghum bicolor (taxid: 4558) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 8 EC: 5 |
| >sp|Q9LTH3|U76E1_ARATH UDP-glycosyltransferase 76E1 OS=Arabidopsis thaliana GN=UGT76E1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 252 bits (644), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 162/466 (34%), Positives = 250/466 (53%), Gaps = 42/466 (9%)
Query: 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFS--RYMQIPG 65
+ ++P+PA GHV ++ L + L G IT + T+ Y+RV SS FS ++ IPG
Sbjct: 9 RIVLVPVPAQGHVTPIMQLGKALYSKGFSITVVLTQ--YNRV--SSSKDFSDFHFLTIPG 64
Query: 66 FQFKTLTDGLPRDHPRTPDKFPELVDSL-NCATPPLLKEMVSDSKSPVNCIITDGYMSRA 124
+LT+ ++ P KF ++ + + + +++ + + + C++ D YM +
Sbjct: 65 ----SLTESDLKN--LGPFKFLFKLNQICEASFKQCIGQLLQEQGNDIACVVYDEYMYFS 118
Query: 125 IDAAREVGVSIIYFRTISACAFWSFHCIPDI-------------IDAGELPIKGFLRCRD 171
A +E + + F T SA AF + + + E P LR +D
Sbjct: 119 QAAVKEFQLPSVLFSTTSATAFVCRSVLSRVNAESFLLDMKDPKVSDKEFPGLHPLRYKD 178
Query: 172 LPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPNIYSIGP 231
LP+ P++ L +++ + A +I+N+ LE L+ ++ +Y IGP
Sbjct: 179 LPT--SAFGPLESILKVYSETVNIRT-ASAVIINSTSCLESSSLAWLQKQLQVPVYPIGP 235
Query: 232 LNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYG 291
L H+ P SSL + DRSC+ WL+KQ SVIY+S GS+A+M ++E +G
Sbjct: 236 L--HIAASAP------SSLLEEDRSCLEWLNKQKIGSVIYISLGSLALMETKDMLEMAWG 287
Query: 292 LVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLT 351
L +S + FLWVIRP I G + +PEE ERG I W PQ EVL H AVGGF +
Sbjct: 288 LRNSNQPFLWVIRPGSIPGSEWTESLPEEFSRLVSERGYIVKWAPQIEVLRHPAVGGFWS 347
Query: 352 HCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLM 411
HCGWNSTLESI G+PMIC P DQ++N+R++ VW++G+ ++ D+ VE+AV L+
Sbjct: 348 HCGWNSTLESIGEGVPMICRPFTGDQKVNARYLERVWRIGVQLEGELDKGTVERAVERLI 407
Query: 412 VERKEEFMESADRMANLAKK---SVNKGGSSYCNLDRLVNDIKMMS 454
++ EE E R+ NL +K SV GSS+ +LD VN +KMM+
Sbjct: 408 MD--EEGAEMRKRVINLKEKLQASVKSRGSSFSSLDNFVNSLKMMN 451
|
Possesses low quercetin 3-O-glucosyltransferase and 7-O-glucosyltransferase activities in vitro. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q94AB5|U7E12_ARATH UDP-glycosyltransferase 76E12 OS=Arabidopsis thaliana GN=UGT76E12 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 244 bits (622), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 169/474 (35%), Positives = 249/474 (52%), Gaps = 45/474 (9%)
Query: 2 EKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYM 61
EK V ++P PA GH++ M+ LA+ L G IT + T+ Y SD F+
Sbjct: 8 EKPARRSVVLVPFPAQGHISPMMQLAKTLHLKGFSITVVQTKFNY----FSPSDDFTH-- 61
Query: 62 QIPGFQFKTLTDGLPRDHPRT--PDKFP-ELVDSLNCATPPLLKEMVSDSKSPVNCIITD 118
FQF T+ + LP + P +F +L + L ++V + ++C+I D
Sbjct: 62 ---DFQFVTIPESLPESDFKNLGPIQFLFKLNKECKVSFKDCLGQLVLQQSNEISCVIYD 118
Query: 119 GYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAG--ELPIKGF---------- 166
+M A AA+E + I F T SA AF + + D + A + P+K
Sbjct: 119 EFMYFAEAAAKECKLPNIIFSTTSATAF-ACRSVFDKLYANNVQAPLKETKGQQEELVPE 177
Query: 167 ---LRCRDLP--SFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNH 221
LR +D P F + M+ + R T A +I+NT LE LS ++
Sbjct: 178 FYPLRYKDFPVSRFASLESIMEVY-----RNTVDKRTASSVIINTASCLESSSLSFLQQQ 232
Query: 222 SCP-NIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVM 280
+Y IGPL H+ P +SL + ++SC+ WL+KQ SVIY+S GSIA+M
Sbjct: 233 QLQIPVYPIGPL--HMVASAP------TSLLEENKSCIEWLNKQKVNSVIYISMGSIALM 284
Query: 281 SRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEV 340
++++E GL S + FLWVIRP I G + +PEE + +RG I W PQ+EV
Sbjct: 285 EINEIMEVASGLAASNQHFLWVIRPGSIPGSEWIESMPEEFSKMVLDRGYIVKWAPQKEV 344
Query: 341 LAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDR 400
L+H AVGGF +HCGWNSTLESI G+PMIC P DQ++N+R++ VWK+G+ ++ DR
Sbjct: 345 LSHPAVGGFWSHCGWNSTLESIGQGVPMICRPFSGDQKVNARYLECVWKIGIQVEGELDR 404
Query: 401 NIVEKAVNDLMV-ERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKMM 453
+VE+AV LMV E EE + A + + SV GGSS+ +L+ V+ I+ +
Sbjct: 405 GVVERAVKRLMVDEEGEEMRKRAFSLKEQLRASVKSGGSSHNSLEEFVHFIRTL 458
|
Possesses quercetin 3-O-glucosyltransferase and 7-O-glucosyltransferase activities in vitro. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 9 EC: 1 |
| >sp|Q9LTH2|U76E2_ARATH UDP-glycosyltransferase 76E2 OS=Arabidopsis thaliana GN=UGT76E2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 243 bits (620), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 171/473 (36%), Positives = 250/473 (52%), Gaps = 50/473 (10%)
Query: 2 EKQ-DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFS-- 58
EKQ + ++P+PA GHV M+ L + L G IT + T+ +RV SS FS
Sbjct: 3 EKQVKETRIVLVPVPAQGHVTPMMQLGKALHSKGFSITVVLTQS--NRV--SSSKDFSDF 58
Query: 59 RYMQIPGFQFKTLTDGLPRDHPRTPDKFPELVDSLNCATPPLLKEMVSD-----SKSPVN 113
++ IPG +LT+ ++ P KF V LN K+ + + +
Sbjct: 59 HFLTIPG----SLTESDLQN--LGPQKF---VLKLNQICEASFKQCIGQLLHEQCNNDIA 109
Query: 114 CIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDI------IDAG--ELPIKG 165
C++ D YM + A +E + + F T SA AF + + ID E K
Sbjct: 110 CVVYDEYMYFSHAAVKEFQLPSVVFSTTSATAFVCRSVLSRVNAESFLIDMKDPETQDKV 169
Query: 166 F-----LRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRN 220
F LR +DLP+ V P++ L +++ ET + A +I+N+ LE L++++
Sbjct: 170 FPGLHPLRYKDLPT--SVFGPIESTLKVYS-ETVNTRTASAVIINSASCLESSSLARLQQ 226
Query: 221 HSCPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVM 280
+Y IGPL H+ P SSL + DRSC+ WL+KQ SVIY+S GS+A+M
Sbjct: 227 QLQVPVYPIGPL--HITASAP------SSLLEEDRSCVEWLNKQKSNSVIYISLGSLALM 278
Query: 281 SRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEV 340
++E +GL +S + FLWV+RP I G + +PEE ERG I W PQ EV
Sbjct: 279 DTKDMLEMAWGLSNSNQPFLWVVRPGSIPGSEWTESLPEEFNRLVSERGYIVKWAPQMEV 338
Query: 341 LAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDR 400
L H AVGGF +HCGWNST+ESI G+PMIC P DQ++N+R++ VW++G+ ++ D+
Sbjct: 339 LRHPAVGGFWSHCGWNSTVESIGEGVPMICRPFTGDQKVNARYLERVWRIGVQLEGDLDK 398
Query: 401 NIVEKAVNDLMVERKEEFMESADRMANLAKK---SVNKGGSSYCNLDRLVNDI 450
VE+AV L+V+ EE E R +L +K SV GGSS +LD VN +
Sbjct: 399 ETVERAVEWLLVD--EEGAEMRKRAIDLKEKIETSVRSGGSSCSSLDDFVNSM 449
|
Possesses low quercetin 3-O-glucosyltransferase and 7-O-glucosyltransferase activities in vitro. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 460 | ||||||
| 242199346 | 484 | UDP-glucosyltransferase family 1 protein | 0.980 | 0.931 | 0.747 | 0.0 | |
| 225449274 | 475 | PREDICTED: UDP-glycosyltransferase 85A1 | 0.965 | 0.934 | 0.560 | 1e-153 | |
| 359486575 | 594 | PREDICTED: UDP-glycosyltransferase 85A1- | 0.965 | 0.747 | 0.572 | 1e-151 | |
| 225449284 | 480 | PREDICTED: UDP-glycosyltransferase 85A1- | 0.965 | 0.925 | 0.578 | 1e-151 | |
| 359486567 | 479 | PREDICTED: LOW QUALITY PROTEIN: UDP-glyc | 0.969 | 0.931 | 0.558 | 1e-150 | |
| 225449268 | 478 | PREDICTED: UDP-glycosyltransferase 85A1- | 0.969 | 0.933 | 0.563 | 1e-149 | |
| 359478189 | 491 | PREDICTED: UDP-glycosyltransferase 85A1 | 0.969 | 0.908 | 0.553 | 1e-149 | |
| 225449282 | 480 | PREDICTED: UDP-glycosyltransferase 85A1 | 0.965 | 0.925 | 0.563 | 1e-149 | |
| 359478183 | 480 | PREDICTED: UDP-glycosyltransferase 85A1 | 0.969 | 0.929 | 0.551 | 1e-148 | |
| 225449258 | 479 | PREDICTED: UDP-glycosyltransferase 85A1 | 0.969 | 0.931 | 0.556 | 1e-148 |
| >gi|242199346|gb|ACS87994.1| UDP-glucosyltransferase family 1 protein [Citrus sinensis] | Back alignment and taxonomy information |
|---|
Score = 737 bits (1903), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/468 (74%), Positives = 402/468 (85%), Gaps = 17/468 (3%)
Query: 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQ 67
HV I PLPA+GHVNSML LAELL HAGIKITFLN+EHY++R++RHSSD FSRYM +PGFQ
Sbjct: 17 HVLIWPLPALGHVNSMLKLAELLSHAGIKITFLNSEHYHERLVRHSSDVFSRYMNLPGFQ 76
Query: 68 FKTLTDGLPRDHPRTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDA 127
FKT+TDGLP+DHP+T D F EL++SL TPPLLK+M++D+KSPV+CII+DG MS AID
Sbjct: 77 FKTITDGLPKDHPQTVDNFHELLNSLASVTPPLLKDMLTDAKSPVHCIISDGLMSFAIDV 136
Query: 128 AREVGVSIIYFRTISACAFWSFHCIPDIIDAGELPIKG----------------FLRCRD 171
A++VG+ IIYFRT+SACAFW++ CIP+IIDAGELPIKG FLRCRD
Sbjct: 137 AKQVGIPIIYFRTVSACAFWAYFCIPEIIDAGELPIKGNEDMDRLIKHVPGMEKFLRCRD 196
Query: 172 LPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPNIYSIGP 231
LPSFCR DPM+ +L L ETR S ADGL+LNTFEDLEGP+LSQIR H CP IY+IGP
Sbjct: 197 LPSFCRAEDPMNMNLQLVVSETRSSVRADGLVLNTFEDLEGPVLSQIRAH-CPKIYTIGP 255
Query: 232 LNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYG 291
LNAHLK RIPE T+SS+SLW++DR C+AWLD QP +SVI+VSFGS+AVM RDQLIEF+YG
Sbjct: 256 LNAHLKARIPENTHSSNSLWEVDRGCIAWLDNQPSKSVIFVSFGSVAVMQRDQLIEFWYG 315
Query: 292 LVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLT 351
LV+S K FLWVIRPDLISGKDGENQIP+EL +ATKERG IAGWVPQEEVL H AVGGFLT
Sbjct: 316 LVNSHKRFLWVIRPDLISGKDGENQIPKELDKATKERGYIAGWVPQEEVLGHKAVGGFLT 375
Query: 352 HCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLM 411
HCGWNSTLESIVA MPMICWPSFADQQINSRFV EVWKLGLD+KDLCDR IVEK VN+L+
Sbjct: 376 HCGWNSTLESIVARMPMICWPSFADQQINSRFVDEVWKLGLDMKDLCDRKIVEKMVNELL 435
Query: 412 VERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKMMSSQPQN 459
VER+ FM+SADRMANLA KSVN+GGSSYCNLDRL+NDI+MMSS+ +N
Sbjct: 436 VERRAAFMKSADRMANLAIKSVNEGGSSYCNLDRLINDIRMMSSKSEN 483
|
Source: Citrus sinensis Species: Citrus sinensis Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225449274|ref|XP_002281029.1| PREDICTED: UDP-glycosyltransferase 85A1 isoform 2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 546 bits (1406), Expect = e-153, Method: Compositional matrix adjust.
Identities = 264/471 (56%), Positives = 341/471 (72%), Gaps = 27/471 (5%)
Query: 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSS--DAFSRYMQIPG 65
HV + P P GHVNSML LAELL AG++ITFLN+++ + R++R+++ D F+RY G
Sbjct: 9 HVLVFPFPIQGHVNSMLKLAELLSLAGLRITFLNSDYTHSRLLRYTNILDRFTRY---AG 65
Query: 66 FQFKTLTDGLPRDHPRTPDKFPELVDSLNCATPPLLKEMVSD---SKSPVNCIITDGYMS 122
F+F+T++DGLP DHPRT + ++ D + T PL +EM+ S PV CII DG M
Sbjct: 66 FRFQTISDGLPLDHPRTGVQLKDMFDGMKATTKPLFREMIMSWCRSSDPVTCIIADGIMG 125
Query: 123 RAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELPIK---------------GFL 167
AID EVGV I FRT S CAFW++ +P +I+AGE+P K GFL
Sbjct: 126 FAIDVGNEVGVPTISFRTSSPCAFWAYFSLPQLIEAGEVPFKDDDMDQLVTSVPGMEGFL 185
Query: 168 RCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPNIY 227
R RDLPSFCR D DP+L L ETR + AD LILNTFEDL+G LSQIR+H CP +Y
Sbjct: 186 RRRDLPSFCRTKDANDPNLQLVMIETRQTPRADALILNTFEDLDGATLSQIRSH-CPKLY 244
Query: 228 SIGPLNAHLKVRIPEKTYSS---SSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQ 284
+IGPL+AHLK R+ +T +S +SLW+ D+ C+ WLD+QP +SVIYVSFGS+ V+++++
Sbjct: 245 TIGPLHAHLKSRLASETTASQFSNSLWEEDKRCIPWLDRQPSKSVIYVSFGSLTVITKEE 304
Query: 285 LIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHS 344
L+EF++GLV+S FLWVIRPD ++ KDGE Q P +L E TKERG I GWVPQEEVLAH
Sbjct: 305 LMEFWHGLVNSGSRFLWVIRPDSLTEKDGEFQPPAQLWEVTKERGQIVGWVPQEEVLAHP 364
Query: 345 AVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVE 404
AVGGFLT+ GWNST+ESI AG+PMICWP FADQQ+NSRFV VWKLG+D+KD CDR +E
Sbjct: 365 AVGGFLTYSGWNSTIESIFAGVPMICWPYFADQQVNSRFVSHVWKLGMDMKDTCDRVTIE 424
Query: 405 KAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKMMSS 455
K V DLM +R+ EF +SA+ MA LA+ S+++GGSSYCN RL+ I++MS+
Sbjct: 425 KMVRDLMEKRRTEFTKSAEAMAKLARSSLSEGGSSYCNFSRLIESIRLMSA 475
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359486575|ref|XP_002276665.2| PREDICTED: UDP-glycosyltransferase 85A1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 269/470 (57%), Positives = 337/470 (71%), Gaps = 26/470 (5%)
Query: 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQ 67
HV I P PA GHVNSML LAELL AG+ +TFLN+E+ R++ H+ D +R+ + PGF+
Sbjct: 123 HVLIFPFPAQGHVNSMLKLAELLSVAGLHVTFLNSEYNQHRLLLHA-DIQTRFSRYPGFR 181
Query: 68 FKTLTDGLPRDHPRTPDKFPELVDSLNCATPPLLKEMV------SDSKSPVNCIITDGYM 121
F+T++DGL DHPRT ++ +L + L P+ +E+V SD+ PVNCII DG M
Sbjct: 182 FQTISDGLTTDHPRTGERVMDLFEGLKATAKPIFRELVISRGQGSDTLPPVNCIIADGIM 241
Query: 122 SRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELPIKG---------------F 166
S ID A EVG+ II FRTISAC+FW++ +I++GELP+KG F
Sbjct: 242 SFTIDIANEVGIPIISFRTISACSFWAYFSALKLIESGELPLKGNDMDQLVTSIPGMEGF 301
Query: 167 LRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPNI 226
LR RDLPS RV++ D LLL +ET+ + A LILNTFEDLEGPIL QIRNH CP
Sbjct: 302 LRKRDLPSLIRVSNLDDERLLLVTKETQQTPRAYALILNTFEDLEGPILGQIRNH-CPKT 360
Query: 227 YSIGPLNAHLKVRIPEKT---YSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRD 283
Y+IGPL+AHL+ R+ ++ SS+SL + DRSC+AWL++QP +SVIYVSFGS+ V++R
Sbjct: 361 YTIGPLHAHLETRLASESTTSQSSNSLRQEDRSCIAWLNRQPSKSVIYVSFGSVTVITRK 420
Query: 284 QLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAH 343
QLIEF YGLV+S FLWVIR D ++ +DGE Q P ELLE KER I W PQEEVLAH
Sbjct: 421 QLIEFCYGLVNSGSRFLWVIRTDSLAEEDGERQTPAELLEGAKERSYIVEWAPQEEVLAH 480
Query: 344 SAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIV 403
AVGGFLTH GWNSTLESI AG+PMICWP FADQQINSRFV VWKLG D+KD CDR IV
Sbjct: 481 PAVGGFLTHSGWNSTLESICAGVPMICWPYFADQQINSRFVSHVWKLGSDMKDTCDRLIV 540
Query: 404 EKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKMM 453
EK V DLM ER++E +++AD MA A+K V++GGSSYCNL L+ +I++M
Sbjct: 541 EKMVRDLMEERRDELLKTADMMATRARKCVSEGGSSYCNLSSLIEEIRLM 590
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225449284|ref|XP_002276823.1| PREDICTED: UDP-glycosyltransferase 85A1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 272/470 (57%), Positives = 338/470 (71%), Gaps = 26/470 (5%)
Query: 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQ 67
HV I P PA GHVNSML LAELL AG+ +TFLN+E+ R++ H+ D +R+ PGF+
Sbjct: 9 HVLIFPFPAQGHVNSMLKLAELLSVAGLHVTFLNSEYNQHRLLLHT-DIQTRFSGYPGFR 67
Query: 68 FKTLTDGLPRDHPRTPDKFPELVDSLNCATPPLLKEMV------SDSKSPVNCIITDGYM 121
F+T++DGL DHPRT ++ +L + L P+ +E+V SD+ PVNCII DG M
Sbjct: 68 FQTISDGLTTDHPRTGERVMDLFEGLKATAKPIFRELVISRGQGSDTLPPVNCIIADGIM 127
Query: 122 SRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELPIKG---------------F 166
S ID A EVG+ II FRTISAC+FW++ +I++GELP+KG F
Sbjct: 128 SFTIDIANEVGIPIISFRTISACSFWAYFSALKLIESGELPLKGNDMDQLVTSIPGMEGF 187
Query: 167 LRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPNI 226
LR RDLPS RV++ D LLL +ET+ + A LILNTFEDLEGPIL QIRNH CP I
Sbjct: 188 LRKRDLPSLIRVSNLDDEGLLLVMKETQQTPRAHALILNTFEDLEGPILGQIRNH-CPKI 246
Query: 227 YSIGPLNAHLKVRIPEKT---YSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRD 283
Y+IGPL+AHLK R+ ++ SS+S + DRSC+AWLD QP +SVIYVSFGS+ V+SR
Sbjct: 247 YTIGPLHAHLKTRLASESTTSQSSNSFRQEDRSCIAWLDHQPSKSVIYVSFGSLTVISRK 306
Query: 284 QLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAH 343
QLIEF +GLV+S FLWVIR D ++ +DGE+Q P EL+E KER I W PQEEVLAH
Sbjct: 307 QLIEFCHGLVNSGSRFLWVIRTDSLAEEDGEHQTPAELMEGAKERSYIVEWAPQEEVLAH 366
Query: 344 SAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIV 403
AVGGFLTH GWNSTLESI AG+PMICWP FADQQINSRFV VWKLG D+KD CDR IV
Sbjct: 367 PAVGGFLTHSGWNSTLESICAGVPMICWPYFADQQINSRFVSHVWKLGSDMKDTCDRLIV 426
Query: 404 EKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKMM 453
EK V DLM ERK+E +++AD+MA A+K V++GGSSYCNL LV++I++M
Sbjct: 427 EKMVRDLMEERKDELLKTADKMATRARKCVSEGGSSYCNLSSLVDEIRLM 476
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359486567|ref|XP_002280470.2| PREDICTED: LOW QUALITY PROTEIN: UDP-glycosyltransferase 85A1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 264/473 (55%), Positives = 341/473 (72%), Gaps = 27/473 (5%)
Query: 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQ 67
HV I P P G+VNSML LAELL AGI++TFLN HY R + S+ +R+ + PGF+
Sbjct: 9 HVLIFPFPIQGNVNSMLKLAELLCLAGIQVTFLNC-HYPHRRLLSYSNIQARFSRYPGFR 67
Query: 68 FKTLTDGLPRDHPRTPDKFPELVDSLNCATPPLLKEMV-------SDSKSPVNCIITDGY 120
F+T++DGLP +HPRT ++F ++VD + T PL +M+ SD++SP+ C+I DG
Sbjct: 68 FETISDGLPMEHPRTAEQFLDIVDGVKTTTKPLFMKMMISWCRSASDTRSPLTCVIADGL 127
Query: 121 MSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELPIKG--------------- 165
MS AID A EVG+ +I FR ISAC+FW++ +P +I+AGE+P +G
Sbjct: 128 MSFAIDVANEVGLPVIIFRAISACSFWAYFSLPQLIEAGEVPFRGGDMDRLVASVPGMEG 187
Query: 166 FLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPN 225
FLR RDLPS C + D DP L + TR + A L++NTF+DLEGPILSQIRNH CP
Sbjct: 188 FLRRRDLPSCCXLKDVDDPDLQNLMKNTRQTHRAHALVINTFDDLEGPILSQIRNH-CPR 246
Query: 226 IYSIGPLNAHLKVRIPEKT---YSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSR 282
Y+IGPL+A LK ++ +T SS+S W+ DRSC+ WLD+QP +SVIYVSFGS+A++++
Sbjct: 247 TYTIGPLHALLKTKLATETSTSQSSNSFWEEDRSCIPWLDRQPSKSVIYVSFGSLAIITK 306
Query: 283 DQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLA 342
++L EF++GLV+S FLWVIRPD + GKD E Q P ELLE TK+RG + GW PQEEVL
Sbjct: 307 EELREFWHGLVNSGSRFLWVIRPDALVGKDEERQTPAELLEGTKDRGYVVGWAPQEEVLK 366
Query: 343 HSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNI 402
H AVGGFLTH GWNSTLESIV G+PMICWP FADQQINSRFV VWKLG+D+KD CDR
Sbjct: 367 HPAVGGFLTHGGWNSTLESIVEGLPMICWPYFADQQINSRFVSHVWKLGMDMKDSCDRVT 426
Query: 403 VEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKMMSS 455
VEK V DLMVE+++EFME+AD +A LAKK V GSS CNL+ L+ DI+++S+
Sbjct: 427 VEKMVRDLMVEKRDEFMEAADTLATLAKKCVGDSGSSSCNLNSLIEDIRLLST 479
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225449268|ref|XP_002276617.1| PREDICTED: UDP-glycosyltransferase 85A1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 266/472 (56%), Positives = 336/472 (71%), Gaps = 26/472 (5%)
Query: 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQ 67
HV I P P+ GHVNSML LAELL G+ +TFLN+++ R+ H+ D +R+ + PGF+
Sbjct: 9 HVLIFPFPSQGHVNSMLKLAELLSVVGLHVTFLNSDYNQHRLFLHT-DIQTRFSRYPGFR 67
Query: 68 FKTLTDGLPRDHPRTPDKFPELVDSLNCATPPLLKEMV------SDSKSPVNCIITDGYM 121
F+T++DGL DHPRT ++ +L + L P+ +E++ SD++ PV+CII DG M
Sbjct: 68 FQTISDGLTTDHPRTGERVMDLFEGLKATAKPIFRELMISRGQGSDTRPPVSCIIADGMM 127
Query: 122 SRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELPIKG---------------F 166
S ID A EVG+ II FRT+SAC+FW++ +I++GELP+KG F
Sbjct: 128 SFTIDIANEVGIPIISFRTVSACSFWAYFSALKLIESGELPLKGNDMDQLVTSIPGMEGF 187
Query: 167 LRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPNI 226
LR RDLPS RV++ D LLL +ET+ + A LILNTFEDLEGPIL QIRNH CP
Sbjct: 188 LRKRDLPSLLRVSNLDDEGLLLVTKETQQTPRAHALILNTFEDLEGPILGQIRNH-CPKT 246
Query: 227 YSIGPLNAHLKVRIPEKT---YSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRD 283
Y+IGPL+AHLK R+ ++ SS+S + DRSC+AWLD QP +SVIYVSFGS+ V+SR
Sbjct: 247 YTIGPLHAHLKTRLASESTTSQSSNSFRQEDRSCIAWLDHQPSKSVIYVSFGSMVVISRK 306
Query: 284 QLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAH 343
QLIEF YGLV+S FLWVIR D ++ +DGE+Q P EL+E KER I W PQEEVLAH
Sbjct: 307 QLIEFCYGLVNSSSRFLWVIRTDSLAEEDGEHQTPAELMEGAKERSYIVEWAPQEEVLAH 366
Query: 344 SAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIV 403
AVGGFLTH GWNSTLESI AG+PMICWP FADQQINSRFV VWKLG D+KD CDR IV
Sbjct: 367 PAVGGFLTHSGWNSTLESICAGVPMICWPYFADQQINSRFVSHVWKLGSDMKDTCDRLIV 426
Query: 404 EKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKMMSS 455
EK V DLM ERK+E +E+AD MA A+K V++GGSSYCNL L+ +I++M +
Sbjct: 427 EKMVRDLMEERKDELLETADMMATRARKCVSEGGSSYCNLSSLIEEIRLMGA 478
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359478189|ref|XP_002268487.2| PREDICTED: UDP-glycosyltransferase 85A1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 262/473 (55%), Positives = 335/473 (70%), Gaps = 27/473 (5%)
Query: 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQ 67
HV I PLP GHVN ML LAELL AG++ITFLN+++ + R++R++ + RY + PGF+
Sbjct: 9 HVLIFPLPVQGHVNPMLKLAELLSLAGLRITFLNSDYNHHRLLRYT-NILDRYTRYPGFR 67
Query: 68 FKTLTDGLPRDHPRTPDKFPELVDSLNCATPPLLKEMV---SDSKSPVNCIITDGYMSRA 124
F+T++DGLP D PRT +++D + T PL +EMV S PV CII DG MS A
Sbjct: 68 FQTISDGLPLDRPRTGAGLRDMMDGIKATTKPLFREMVISWCRSSDPVTCIIADGLMSFA 127
Query: 125 IDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELPIKG------------------- 165
ID A EVGV II RT+S C F ++ ++I+AGE+P KG
Sbjct: 128 IDVANEVGVPIISCRTVSPCCFLAYFSFAELIEAGEVPFKGNFSDDDMDRLVTRVPGMEG 187
Query: 166 FLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPN 225
FLR RDLPSFCR D D + ET+ + A LILNTFEDL+GPILSQIRNH CP
Sbjct: 188 FLRRRDLPSFCRTRDANDRGIQFIITETQQTPRAHALILNTFEDLDGPILSQIRNH-CPK 246
Query: 226 IYSIGPLNAHLKVRIPEKTYSS---SSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSR 282
IY+IGPL+AHLK R+ +T +S +S W DRSC+AWLD+QP +SVIYVSFGSI V+++
Sbjct: 247 IYTIGPLHAHLKSRLASETTTSQFSNSFWVEDRSCLAWLDRQPSKSVIYVSFGSITVITK 306
Query: 283 DQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLA 342
+Q++EF++GLV+S FLWVIRPD ++ KDGE Q+ +L E TKERG I W PQEEVLA
Sbjct: 307 EQMMEFWHGLVNSGSRFLWVIRPDSLTEKDGEFQLQAQLWEVTKERGQIVDWAPQEEVLA 366
Query: 343 HSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNI 402
H AVGGFLTH GWNSTLESI AG+PMICWP F DQQ+NSRFV VWK+G+D+KD CDR
Sbjct: 367 HPAVGGFLTHGGWNSTLESIFAGVPMICWPYFTDQQLNSRFVSHVWKMGMDMKDTCDRVT 426
Query: 403 VEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKMMSS 455
+EK V D+M R+ EF +S D MA LA++S+++GG+SYCN DRL+ DI++MS+
Sbjct: 427 IEKMVRDVMEGRRAEFTKSVDAMAKLARRSLSEGGTSYCNFDRLIEDIRLMSA 479
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225449282|ref|XP_002276771.1| PREDICTED: UDP-glycosyltransferase 85A1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 265/470 (56%), Positives = 335/470 (71%), Gaps = 26/470 (5%)
Query: 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQ 67
HV I P P+ GHVNSML LAELL G+ +TFLN+++ R+ H+ D +R+ + PGF+
Sbjct: 9 HVLIFPFPSQGHVNSMLKLAELLSVVGLHVTFLNSDYNQHRLFLHT-DIQTRFSRYPGFR 67
Query: 68 FKTLTDGLPRDHPRTPDKFPELVDSLNCATPPLLKEMV------SDSKSPVNCIITDGYM 121
F+T++DGL DHPRT ++ +L + L P+ +E++ SD++ PV+CII DG M
Sbjct: 68 FQTISDGLTTDHPRTGERVMDLFEGLKATAKPIFRELMISRGQGSDTRPPVSCIIADGMM 127
Query: 122 SRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELPIKG---------------F 166
S ID A EVG+ II FRT+SAC+FW++ +I++GELP+KG F
Sbjct: 128 SFTIDIANEVGIPIISFRTVSACSFWAYFSALKLIESGELPLKGNDMDQLVTSIPGMEGF 187
Query: 167 LRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPNI 226
LR RDLPS RV++ D LLL +ET+ + A LILNTFEDLEGPIL QIRNH CP
Sbjct: 188 LRKRDLPSLLRVSNLDDEGLLLLTKETQQTPRAHALILNTFEDLEGPILGQIRNH-CPKT 246
Query: 227 YSIGPLNAHLKVRIPEKT---YSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRD 283
Y+IGPL+AHLK R+ ++ SS+S + DRSC+AWLD QP +SVIYVSFGS+ V+SR
Sbjct: 247 YTIGPLHAHLKTRLASESTTSQSSNSFRQEDRSCIAWLDHQPSKSVIYVSFGSMVVISRK 306
Query: 284 QLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAH 343
QLIEF YGLV+S FLWVIR D ++ +DGE+Q P EL+E KER I W PQEEVLAH
Sbjct: 307 QLIEFCYGLVNSSSRFLWVIRTDSLAEEDGEHQTPAELMEGAKERSYIVEWAPQEEVLAH 366
Query: 344 SAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIV 403
AVGGFLTH GWNSTLESI AG+PMICWP FADQQINSRFV VWKLG D+KD CDR IV
Sbjct: 367 PAVGGFLTHSGWNSTLESICAGVPMICWPYFADQQINSRFVSHVWKLGSDMKDTCDRLIV 426
Query: 404 EKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKMM 453
EK V DLM ERK+E +++AD MA A+K V++GGSSYCNL L+ +I++M
Sbjct: 427 EKMVRDLMEERKDELLKTADMMATRARKCVSEGGSSYCNLSSLIEEIRLM 476
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359478183|ref|XP_002268187.2| PREDICTED: UDP-glycosyltransferase 85A1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 261/473 (55%), Positives = 335/473 (70%), Gaps = 27/473 (5%)
Query: 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQ 67
HV I PLP GHVN ML LAELL AG++ITFLN+++ + R++R++ + RY + PGF+
Sbjct: 9 HVLIFPLPVQGHVNPMLKLAELLSLAGLRITFLNSDYNHHRLLRYT-NILDRYTRYPGFR 67
Query: 68 FKTLTDGLPRDHPRTPDKFPELVDSLNCATPPLLKEMV---SDSKSPVNCIITDGYMSRA 124
F+T++DGLP D P T +++D + T PL +EMV S PV CII DG MS A
Sbjct: 68 FQTISDGLPLDRPWTGAGLRDMMDGIKATTKPLFREMVISWCQSSDPVTCIIADGLMSFA 127
Query: 125 IDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELPIKG------------------- 165
ID A EVGV II RT+S C F ++ ++I+AGE+P KG
Sbjct: 128 IDVANEVGVPIISCRTVSPCCFLAYFSFAELIEAGEVPFKGNFSNDDMDRLVTRVPGMEG 187
Query: 166 FLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPN 225
FLR RDLPSFCR D D + ET+ + A LILNTFEDL+GPILSQIRNH CP
Sbjct: 188 FLRRRDLPSFCRTRDANDRGIQFIITETQQTPRAHALILNTFEDLDGPILSQIRNH-CPK 246
Query: 226 IYSIGPLNAHLKVRIPEKTYSS---SSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSR 282
IY+IGPL+AHLK R+ +T +S +S W+ DRSC+AWLD+QP +S IYVSFGSI V+++
Sbjct: 247 IYTIGPLHAHLKSRLASETTTSQFSNSFWEEDRSCLAWLDRQPSKSFIYVSFGSITVITK 306
Query: 283 DQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLA 342
+Q++EF++GLV+S FLWVIRPD ++ KDGE Q+ +L E TKERG I W PQEEVLA
Sbjct: 307 EQMMEFWHGLVNSGSRFLWVIRPDSLTEKDGEFQLQAQLREVTKERGQIVDWAPQEEVLA 366
Query: 343 HSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNI 402
H AVGGFLTH GWNSTLESI AG+PMICWP F+DQQ+NSRFV VWK+G+D+KD CDR
Sbjct: 367 HPAVGGFLTHGGWNSTLESIFAGVPMICWPYFSDQQLNSRFVSHVWKIGMDMKDTCDRVT 426
Query: 403 VEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKMMSS 455
VEK V D+M ER+ EF +S D MA LA+ S+++GG+SYCN +RL+ DI++MS+
Sbjct: 427 VEKMVRDVMEERRAEFTKSVDAMAKLARSSLSEGGTSYCNFNRLIEDIRLMSA 479
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225449258|ref|XP_002280528.1| PREDICTED: UDP-glycosyltransferase 85A1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 263/473 (55%), Positives = 339/473 (71%), Gaps = 27/473 (5%)
Query: 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQ 67
HV I P P G+VNSML L ELL AGI++TFLN HY R + S+ +R+ + PGF+
Sbjct: 9 HVLIFPFPIQGNVNSMLKLTELLCLAGIQVTFLNC-HYPHRRLLSYSNIQARFSRYPGFR 67
Query: 68 FKTLTDGLPRDHPRTPDKFPELVDSLNCATPPLLKEMV-------SDSKSPVNCIITDGY 120
F+T++DGLP +HPRT ++F ++VD + T PL EM+ SD++SP+ CII DG
Sbjct: 68 FETISDGLPMEHPRTAEQFLDIVDGVKTTTAPLFMEMMISWCRSASDTRSPLTCIIADGL 127
Query: 121 MSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELPIKG--------------- 165
MS +ID A EVG+ +I FR ISAC+FW++ +P +I+AGE+P +G
Sbjct: 128 MSFSIDVANEVGLPVIIFRAISACSFWAYFSLPQLIEAGEVPFRGGDMDRLVASVPGMEG 187
Query: 166 FLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPN 225
FLR RDLPS CRV D +P L + R + A ++NTF+DLEGPILSQIRNH P
Sbjct: 188 FLRRRDLPSCCRVKDVDNPDLQNPMKNIRKTHGAHAQVINTFDDLEGPILSQIRNH-FPR 246
Query: 226 IYSIGPLNAHLKVRIPEKT---YSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSR 282
Y+IGPL+A LK ++ +T SS+S W+ DRSC+ WLD+QP +SVIYVSFGS+A++++
Sbjct: 247 TYTIGPLHALLKSKLATETSTSQSSNSFWEEDRSCIPWLDRQPSKSVIYVSFGSLAIITK 306
Query: 283 DQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLA 342
++L EF++GLV+S FLWVIRPD + GKD E Q P ELLE TK+RG + GW PQEEVL
Sbjct: 307 EELREFWHGLVNSGSRFLWVIRPDALVGKDEERQTPAELLEGTKDRGYVVGWAPQEEVLK 366
Query: 343 HSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNI 402
H AVGGFLTH GWNSTLESIV G+PMICWP FADQQINSRFV VWKLG+D+KD CDR
Sbjct: 367 HPAVGGFLTHGGWNSTLESIVEGLPMICWPYFADQQINSRFVSHVWKLGMDMKDSCDRVT 426
Query: 403 VEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKMMSS 455
VEK V DLMVE+++EFME+AD +A LAKK V GGSS CNL+ L+ DI+++S+
Sbjct: 427 VEKMVRDLMVEKRDEFMEAADTLATLAKKCVGDGGSSSCNLNSLIEDIRLLST 479
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 460 | ||||||
| TAIR|locus:2196501 | 481 | UGT85A2 "UDP-glucosyl transfer | 0.619 | 0.592 | 0.447 | 3.9e-89 | |
| TAIR|locus:2009557 | 489 | UGT85A1 [Arabidopsis thaliana | 0.619 | 0.582 | 0.436 | 3.9e-87 | |
| TAIR|locus:2196490 | 488 | UGT85A3 "AT1G22380" [Arabidops | 0.623 | 0.588 | 0.420 | 5.7e-86 | |
| TAIR|locus:2196516 | 487 | UGT85A7 "UDP-glucosyl transfer | 0.623 | 0.589 | 0.422 | 4e-83 | |
| TAIR|locus:2032105 | 489 | UGT85A4 "AT1G78270" [Arabidops | 0.621 | 0.584 | 0.404 | 2.5e-77 | |
| TAIR|locus:2074738 | 447 | UGT76B1 "UDP-dependent glycosy | 0.919 | 0.946 | 0.354 | 4.7e-64 | |
| TAIR|locus:2196496 | 479 | UGT85A5 "UDP-glucosyl transfer | 0.732 | 0.703 | 0.394 | 6e-64 | |
| TAIR|locus:2148363 | 453 | UGT76E1 "UDP-glucosyl transfer | 0.919 | 0.933 | 0.350 | 6.2e-62 | |
| TAIR|locus:2075215 | 458 | UGT76E12 "AT3G46660" [Arabidop | 0.943 | 0.947 | 0.358 | 1.6e-61 | |
| TAIR|locus:2078931 | 464 | AT3G55710 [Arabidopsis thalian | 0.945 | 0.937 | 0.331 | 1.9e-60 |
| TAIR|locus:2196501 UGT85A2 "UDP-glucosyl transferase 85A2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 647 (232.8 bits), Expect = 3.9e-89, Sum P(2) = 3.9e-89
Identities = 133/297 (44%), Positives = 186/297 (62%)
Query: 161 LPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRN 220
+P LR +D+PSF R +P D L RE + A +ILNTF+DLE ++ +++
Sbjct: 186 IPSMKNLRLKDIPSFIRTTNPDDIMLNFIIREADRAKRASAIILNTFDDLEHDVIQSMKS 245
Query: 221 HSCPNIYSIGPLNAHLKVRIPEKTYSS-----SSLWKIDRSCMAWLDKQPKQSVIYVSFG 275
P +YSIGPL HL + YS S+LW+ + C+ WL+ + + SV+YV+FG
Sbjct: 246 -IVPPVYSIGPL--HLLEKQESGEYSEIGRTGSNLWREETECLDWLNTKARNSVVYVNFG 302
Query: 276 SIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWV 335
SI V+S QL+EF +GL + K FLWVIRPDL++G E +P E L AT +R +A W
Sbjct: 303 SITVLSAKQLVEFAWGLAATGKEFLWVIRPDLVAGD--EAMVPPEFLTATADRRMLASWC 360
Query: 336 PQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIK 395
PQE+VL+H A+GGFLTHCGWNSTLES+ G+PM+CWP FA+QQ N +F + W++G++I
Sbjct: 361 PQEKVLSHPAIGGFLTHCGWNSTLESLCGGVPMVCWPFFAEQQTNCKFSRDEWEVGIEIG 420
Query: 396 DLCDRNIVEKAVNDLMVERKEEFM-ESADRMANLAKKSV-NKGGSSYCNLDRLVNDI 450
R VE V +LM E K + M E A+ LA ++ +K GSS N + LVN +
Sbjct: 421 GDVKREEVEAVVRELMDEEKGKNMREKAEEWRRLANEATEHKHGSSKLNFEMLVNKV 477
|
|
| TAIR|locus:2009557 UGT85A1 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 635 (228.6 bits), Expect = 3.9e-87, Sum P(2) = 3.9e-87
Identities = 128/293 (43%), Positives = 186/293 (63%)
Query: 161 LPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRN 220
+P ++ +D+PSF R +P D + RET + A +ILNTF+DLE ++ +++
Sbjct: 190 IPTMKNVKLKDIPSFIRTTNPDDVMISFALRETERAKRASAIILNTFDDLEHDVVHAMQS 249
Query: 221 HSCPNIYSIGPLNAHLKVRIPEKT---YSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSI 277
P +YS+GPL+ I E + SS+LWK + C+ WLD + + SVIY++FGSI
Sbjct: 250 -ILPPVYSVGPLHLLANREIEEGSEIGMMSSNLWKEEMECLDWLDTKTQNSVIYINFGSI 308
Query: 278 AVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQ 337
V+S QL+EF +GL S K FLWVIRPDL++G+ E +P + L TK+R +A W PQ
Sbjct: 309 TVLSVKQLVEFAWGLAGSGKEFLWVIRPDLVAGE--EAMVPPDFLMETKDRSMLASWCPQ 366
Query: 338 EEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDL 397
E+VL+H A+GGFLTHCGWNS LES+ G+PM+CWP FADQQ+N +F + W +G++I
Sbjct: 367 EKVLSHPAIGGFLTHCGWNSILESLSCGVPMVCWPFFADQQMNCKFCCDEWDVGIEIGGD 426
Query: 398 CDRNIVEKAVNDLMV-ERKEEFMESADRMANLAKKSV-NKGGSSYCNLDRLVN 448
R VE V +LM E+ ++ E A LA+K+ +K GSS N + +V+
Sbjct: 427 VKREEVEAVVRELMDGEKGKKMREKAVEWQRLAEKATEHKLGSSVMNFETVVS 479
|
|
| TAIR|locus:2196490 UGT85A3 "AT1G22380" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 611 (220.1 bits), Expect = 5.7e-86, Sum P(2) = 5.7e-86
Identities = 124/295 (42%), Positives = 182/295 (61%)
Query: 161 LPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRN 220
+P ++ +D+PSF R +P D L RE + A +ILNTF+DLE I+ +++
Sbjct: 189 IPSMNNVKLKDIPSFIRTTNPNDIMLNFVVREACRTKRASAIILNTFDDLEHDIIQSMQS 248
Query: 221 HSCPNIYSIGPLNAHLKVRIPEKTY---SSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSI 277
P +Y IGPL+ + I E + S+LWK + C+ WL+ + + SV+YV+FGSI
Sbjct: 249 -ILPPVYPIGPLHLLVNREIEEDSEIGRMGSNLWKEETECLGWLNTKSRNSVVYVNFGSI 307
Query: 278 AVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQ 337
+M+ QL+EF +GL + K FLWV+RPD ++G+ E IP+E L T +R + W PQ
Sbjct: 308 TIMTTAQLLEFAWGLAATGKEFLWVMRPDSVAGE--EAVIPKEFLAETADRRMLTSWCPQ 365
Query: 338 EEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDL 397
E+VL+H AVGGFLTHCGWNSTLES+ G+PM+CWP FA+QQ N +F + W++G++I
Sbjct: 366 EKVLSHPAVGGFLTHCGWNSTLESLSCGVPMVCWPFFAEQQTNCKFSCDEWEVGIEIGGD 425
Query: 398 CDRNIVEKAVNDLMV-ERKEEFMESADRMANLAKKSVNKG-GSSYCNLDRLVNDI 450
R VE V +LM E+ ++ E A LA+K+ GSS N + +VN +
Sbjct: 426 VKRGEVEAVVRELMDGEKGKKMREKAVEWRRLAEKATKLPCGSSVINFETIVNKV 480
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| TAIR|locus:2196516 UGT85A7 "UDP-glucosyl transferase 85A7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 605 (218.0 bits), Expect = 4.0e-83, Sum P(2) = 4.0e-83
Identities = 125/296 (42%), Positives = 185/296 (62%)
Query: 161 LPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRN 220
+P LR +D+PS+ R +P + L RE S A +ILNTF++LE ++ +++
Sbjct: 189 IPSMKNLRLKDIPSYIRTTNPDNIMLNFLIREVERSKRASAIILNTFDELEHDVIQSMQS 248
Query: 221 HSCPNIYSIGPLNAHLKVRIPEKTYSSS---SLWKIDRSCMAWLDKQPKQSVIYVSFGSI 277
P +YSIGPL+ +K I E + +LW+ + C+ WLD + SV++V+FG I
Sbjct: 249 -ILPPVYSIGPLHLLVKEEINEASEIGQMGLNLWREEMECLDWLDTKTPNSVLFVNFGCI 307
Query: 278 AVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQ 337
VMS QL EF +GL S+K FLWVIRP+L+ G + +P+E L T +R +A W PQ
Sbjct: 308 TVMSAKQLEEFAWGLAASRKEFLWVIRPNLVVG-EAMVVLPQEFLAETIDRRMLASWCPQ 366
Query: 338 EEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDI-KD 396
E+VL+H A+GGFLTHCGWNSTLES+ G+PMICWP F++Q N +F + W +G++I KD
Sbjct: 367 EKVLSHPAIGGFLTHCGWNSTLESLAGGVPMICWPCFSEQPTNCKFCCDEWGVGIEIGKD 426
Query: 397 LCDRNIVEKAVNDLMV-ERKEEFMESADRMANLAKKSVN-KGGSSYCNLDRLVNDI 450
+ R VE V +LM E+ ++ E A+ LA+++ K GSS NL+ L++ +
Sbjct: 427 V-KREEVETVVRELMDGEKGKKLREKAEEWRRLAEEATRYKHGSSVMNLETLIHKV 481
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| TAIR|locus:2032105 UGT85A4 "AT1G78270" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 569 (205.4 bits), Expect = 2.5e-77, Sum P(2) = 2.5e-77
Identities = 120/297 (40%), Positives = 173/297 (58%)
Query: 161 LPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRN 220
+P ++ +D P F +P DP + T A + +NTFE LE +L +R+
Sbjct: 188 IPSMKKIKLKDFPDFVTTTNPQDPMISFILHVTGRIKRASAIFINTFEKLEHNVLLSLRS 247
Query: 221 HSCPNIYSIGPLNAHLKVRIPEKTYS----SSSLWKIDRSCMAWLDKQPKQSVIYVSFGS 276
P IYS+GP L+ R +K +LW+ + + WLD + +++VIYV+FGS
Sbjct: 248 -LLPQIYSVGPFQI-LENREIDKNSEIRKLGLNLWEEETESLDWLDTKAEKAVIYVNFGS 305
Query: 277 IAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGC-IAGWV 335
+ V++ +Q++EF +GL S K FLWV+R ++ G D + +P E L TK RG I GW
Sbjct: 306 LTVLTSEQILEFAWGLARSGKEFLWVVRSGMVDGDD--SILPAEFLSETKNRGMLIKGWC 363
Query: 336 PQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIK 395
QE+VL+H A+GGFLTHCGWNSTLES+ AG+PMICWP FADQ N +F E W +G++I
Sbjct: 364 SQEKVLSHPAIGGFLTHCGWNSTLESLYAGVPMICWPFFADQLTNRKFCCEDWGIGMEIG 423
Query: 396 DLCDRNIVEKAVNDLMV-ERKEEFMESADRMANLAKK-SVNKGGSSYCNLDRLVNDI 450
+ R VE V +LM E+ + E LA++ S GSSY N + +VN +
Sbjct: 424 EEVKRERVETVVKELMDGEKGKRLREKVVEWRRLAEEASAPPLGSSYVNFETVVNKV 480
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| TAIR|locus:2074738 UGT76B1 "UDP-dependent glycosyltransferase 76B1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 653 (234.9 bits), Expect = 4.7e-64, P = 4.7e-64
Identities = 165/465 (35%), Positives = 242/465 (52%)
Query: 1 MEKQDHVHVAIL-PLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSR 59
ME ++ V L P P GH+N M LA + + G IT ++TE +S S
Sbjct: 1 METRETKPVIFLFPFPLQGHLNPMFQLANIFFNRGFSITVIHTEF--------NSPNSSN 52
Query: 60 YMQIPGFQFKTLTDGLPRDHPRT-PDKFPELVDSLN--CATP--PLLKEMVSDSKSPVNC 114
+ P F F ++ D L P + PD E++ LN C P LK+++S+ + C
Sbjct: 53 F---PHFTFVSIPDSL--SEPESYPDVI-EILHDLNSKCVAPFGDCLKKLISEEPTAA-C 105
Query: 115 IITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELPIKG--------- 165
+I D D + I RT++ AF +F + + G L ++
Sbjct: 106 VIVDALWYFTHDLTEKFNFPRIVLRTVNLSAFVAFSKFHVLREKGYLSLQETKADSPVPE 165
Query: 166 --FLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSC 223
+LR +DLP F + DP L L + + G+I N EDLE L + R
Sbjct: 166 LPYLRMKDLPWF-QTEDPRSGDKLQIGVMKSLKS-SSGIIFNAIEDLETDQLDEARIEFP 223
Query: 224 PNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRD 283
++ IGP + ++ SSSSL D +C++WLDKQ SVIY S GSIA +
Sbjct: 224 VPLFCIGPFHRYVSA-------SSSSLLAHDMTCLSWLDKQATNSVIYASLGSIASIDES 276
Query: 284 QLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAH 343
+ +E +GL +S + FLWV+RP LI GK+ +P+ +E + RG I W PQ EVLAH
Sbjct: 277 EFLEIAWGLRNSNQPFLWVVRPGLIHGKEWIEILPKGFIENLEGRGKIVKWAPQPEVLAH 336
Query: 344 SAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIV 403
A GGFLTHCGWNSTLE I +PMIC PSF DQ++N+R++ +VWK+GL +++ +R ++
Sbjct: 337 RATGGFLTHCGWNSTLEGICEAIPMICRPSFGDQRVNARYINDVWKIGLHLENKVERLVI 396
Query: 404 EKAVNDLMVERK-EEFMESADRMANLAKKSVNKGGSSYCNLDRLV 447
E AV LM + EE + M ++ + GGSS+ NL+ L+
Sbjct: 397 ENAVRTLMTSSEGEEIRKRIMPMKETVEQCLKLGGSSFRNLENLI 441
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| TAIR|locus:2196496 UGT85A5 "UDP-glucosyl transferase 85A5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
Identities = 142/360 (39%), Positives = 211/360 (58%)
Query: 111 PVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELPIKGF---- 166
PV+CI++DG MS +DAA E+GV + F T SAC F ++ I+ G PIK
Sbjct: 119 PVSCIVSDGVMSFTLDAAEELGVPDVLFWTPSACGFLAYLHFYRFIEKGLSPIKDESSLD 178
Query: 167 -----------LRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPIL 215
L +D+PSF R + D L F E + A +ILNTF+ LE ++
Sbjct: 179 TKINWIPSMKNLGLKDIPSFIRATNTEDIMLNFFVHEADRAKRASAIILNTFDSLEHDVV 238
Query: 216 SQIRNHSCPNIYSIGPLNAHLKVRIPEKT---YSSSSLWKIDRSCMAWLDKQPKQSVIYV 272
I++ P +Y+IGPL+ + I E++ +++W+ + C+ WLD + SV+YV
Sbjct: 239 RSIQS-IIPQVYTIGPLHLFVNRDIDEESDIGQIGTNMWREEMECLDWLDTKSPNSVVYV 297
Query: 273 SFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIA 332
+FGSI VMS QL+EF +GL +KK FLWVIRPDL++G +P + L T R +A
Sbjct: 298 NFGSITVMSAKQLVEFAWGLAATKKDFLWVIRPDLVAGD--VPMLPPDFLIETANRRMLA 355
Query: 333 GWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGL 392
W PQE+VL+H AVGGFLTH GWNSTLES+ G+PM+CWP FA+QQ N ++ + W++G+
Sbjct: 356 SWCPQEKVLSHPAVGGFLTHSGWNSTLESLSGGVPMVCWPFFAEQQTNCKYCCDEWEVGM 415
Query: 393 DIKDLCDRNIVEKAVNDLMV-ERKEEFMESADRMANLAKKSVNK-GGSSYCNLDRLVNDI 450
+I R VE+ V +LM ++ ++ + A+ LA+++ GSS N +V+ +
Sbjct: 416 EIGGDVRREEVEELVRELMDGDKGKKMRQKAEEWQRLAEEATKPIYGSSELNFQMVVDKV 475
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| TAIR|locus:2148363 UGT76E1 "UDP-glucosyl transferase 76E1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
Identities = 163/465 (35%), Positives = 253/465 (54%)
Query: 9 VAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFS--RYMQIPGF 66
+ ++P+PA GHV ++ L + L G IT + T+ Y+RV SS FS ++ IPG
Sbjct: 10 IVLVPVPAQGHVTPIMQLGKALYSKGFSITVVLTQ--YNRV--SSSKDFSDFHFLTIPG- 64
Query: 67 QFKTLTDGLPRDHPRTPDKFPELVDSL-NCATPPLLKEMVSDSKSPVNCIITDGYMSRAI 125
+LT+ ++ P KF ++ + + + +++ + + + C++ D YM +
Sbjct: 65 ---SLTESDLKN--LGPFKFLFKLNQICEASFKQCIGQLLQEQGNDIACVVYDEYMYFSQ 119
Query: 126 DAAREVGVSIIYFRTISACAFWSFHCIPDI------IDAGELPI--KGF-----LRCRDL 172
A +E + + F T SA AF + + +D + + K F LR +DL
Sbjct: 120 AAVKEFQLPSVLFSTTSATAFVCRSVLSRVNAESFLLDMKDPKVSDKEFPGLHPLRYKDL 179
Query: 173 PSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPNIYSIGPL 232
P+ P++ L +++ + A +I+N+ LE L+ ++ +Y IGPL
Sbjct: 180 PT--SAFGPLESILKVYSETVNIRT-ASAVIINSTSCLESSSLAWLQKQLQVPVYPIGPL 236
Query: 233 NAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGL 292
H+ P SSL + DRSC+ WL+KQ SVIY+S GS+A+M ++E +GL
Sbjct: 237 --HIAASAP------SSLLEEDRSCLEWLNKQKIGSVIYISLGSLALMETKDMLEMAWGL 288
Query: 293 VHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTH 352
+S + FLWVIRP I G + +PEE ERG I W PQ EVL H AVGGF +H
Sbjct: 289 RNSNQPFLWVIRPGSIPGSEWTESLPEEFSRLVSERGYIVKWAPQIEVLRHPAVGGFWSH 348
Query: 353 CGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMV 412
CGWNSTLESI G+PMIC P DQ++N+R++ VW++G+ ++ D+ VE+AV L++
Sbjct: 349 CGWNSTLESIGEGVPMICRPFTGDQKVNARYLERVWRIGVQLEGELDKGTVERAVERLIM 408
Query: 413 ERKEEFMESADRMANLAKK---SVNKGGSSYCNLDRLVNDIKMMS 454
+ EE E R+ NL +K SV GSS+ +LD VN +KMM+
Sbjct: 409 D--EEGAEMRKRVINLKEKLQASVKSRGSSFSSLDNFVNSLKMMN 451
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| TAIR|locus:2075215 UGT76E12 "AT3G46660" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 629 (226.5 bits), Expect = 1.6e-61, P = 1.6e-61
Identities = 168/469 (35%), Positives = 251/469 (53%)
Query: 2 EKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYM 61
EK V ++P PA GH++ M+ LA+ L G IT + T+ Y SD F+
Sbjct: 8 EKPARRSVVLVPFPAQGHISPMMQLAKTLHLKGFSITVVQTKFNYFS----PSDDFTH-- 61
Query: 62 QIPGFQFKTLTDGLPRDHPRT--PDKFP-ELVDSLNCATPPLLKEMVSDSKSPVNCIITD 118
FQF T+ + LP + P +F +L + L ++V + ++C+I D
Sbjct: 62 ---DFQFVTIPESLPESDFKNLGPIQFLFKLNKECKVSFKDCLGQLVLQQSNEISCVIYD 118
Query: 119 GYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGEL--PIKGFLRCRD--LPS 174
+M A AA+E + I F T SA AF + + D + A + P+K ++ +P
Sbjct: 119 EFMYFAEAAAKECKLPNIIFSTTSATAF-ACRSVFDKLYANNVQAPLKETKGQQEELVPE 177
Query: 175 F--CRVND-PMDPHLLLFA-----RETRLSAHADGLILNTFEDLEGPILSQIRNHSCP-N 225
F R D P+ L + R T A +I+NT LE LS ++
Sbjct: 178 FYPLRYKDFPVSRFASLESIMEVYRNTVDKRTASSVIINTASCLESSSLSFLQQQQLQIP 237
Query: 226 IYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQL 285
+Y IGPL H+ P +SL + ++SC+ WL+KQ SVIY+S GSIA+M +++
Sbjct: 238 VYPIGPL--HMVASAP------TSLLEENKSCIEWLNKQKVNSVIYISMGSIALMEINEI 289
Query: 286 IEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSA 345
+E GL S + FLWVIRP I G + +PEE + +RG I W PQ+EVL+H A
Sbjct: 290 MEVASGLAASNQHFLWVIRPGSIPGSEWIESMPEEFSKMVLDRGYIVKWAPQKEVLSHPA 349
Query: 346 VGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEK 405
VGGF +HCGWNSTLESI G+PMIC P DQ++N+R++ VWK+G+ ++ DR +VE+
Sbjct: 350 VGGFWSHCGWNSTLESIGQGVPMICRPFSGDQKVNARYLECVWKIGIQVEGELDRGVVER 409
Query: 406 AVNDLMVERK-EEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKMM 453
AV LMV+ + EE + A + + SV GGSS+ +L+ V+ I+ +
Sbjct: 410 AVKRLMVDEEGEEMRKRAFSLKEQLRASVKSGGSSHNSLEEFVHFIRTL 458
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| TAIR|locus:2078931 AT3G55710 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 619 (223.0 bits), Expect = 1.9e-60, P = 1.9e-60
Identities = 159/479 (33%), Positives = 243/479 (50%)
Query: 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRY 60
ME++ + + PLP GH N M+ LA + + G +T L+T + RH
Sbjct: 1 MEERKVKRIIMFPLPFTGHFNPMIELAGIFHNRGFSVTILHTSFNFPDPSRH-------- 52
Query: 61 MQIPGFQFKTLT-------DGLPRDHPRTPDKFPELVDSLN-CATPPLLKEMVSDSKSPV 112
P F F+T+T D L + + L+ L T P L E V + + V
Sbjct: 53 ---PQFTFRTITHKNEGEEDPLSQSETSSGKDLVVLISLLKQYYTEPSLAEEVGEGGT-V 108
Query: 113 NCIITDGYMSRAID-AAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELPIKGF----- 166
C+++D R + A+E+GV + RT A F ++ P +ID G LPI+G
Sbjct: 109 CCLVSDALWGRNTEIVAKEIGVCTMVMRTSGAATFCAYTAFPLLIDKGYLPIQGSRLDEL 168
Query: 167 ------LRCRDLPSFCRVNDPMDPHLLL--FARETRLSAHADGLILNTFEDLEGPILSQI 218
L+ +DLP + +P + +L +LS+ G++ NTFEDLE L
Sbjct: 169 VTELPPLKVKDLPVI-KTKEPEGLNRILNDMVEGAKLSS---GVVWNTFEDLERHSLMDC 224
Query: 219 RNHSCPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIA 278
R+ ++ IGP + H + +P K + D WL+KQ QSV+YVSFGS+A
Sbjct: 225 RSKLQVPLFPIGPFHKH-RTDLPPKPKNKDK--DDDEILTDWLNKQAPQSVVYVSFGSLA 281
Query: 279 VMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQE 338
+ ++ E +GL +S+ FLWV+RP ++ G + +P LE +G I WV Q
Sbjct: 282 AIEENEFFEIAWGLRNSELPFLWVVRPGMVRGTEWLESLPCGFLENIGHQGKIVKWVNQL 341
Query: 339 EVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLC 398
E LAH AVG F THCGWNST+ESI G+PMIC P F+DQ +N+R++ +VW++G+ + + C
Sbjct: 342 ETLAHPAVGAFWTHCGWNSTIESICEGVPMICTPCFSDQHVNARYIVDVWRVGMML-ERC 400
Query: 399 --DRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKMMSS 455
+R +EK V +M+E E + A +++ GSS LD+LV+ + S
Sbjct: 401 KMERTEIEKVVTSVMMENGAGLTEMCLELKEKANVCLSEDGSSSKYLDKLVSHVLSFDS 459
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9ZWJ3 | U85A2_ARATH | 2, ., 4, ., 1, ., - | 0.4063 | 0.9478 | 0.9064 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.4.1 | 0.766 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | GSVIVG00018343001 | SubName- Full=Chromosome chr13 scaffold_17, whole genome shotgun sequence; (475 aa) | |||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 460 | |||
| PLN02410 | 451 | PLN02410, PLN02410, UDP-glucoronosyl/UDP-glucosyl | 2e-79 | |
| PLN02555 | 480 | PLN02555, PLN02555, limonoid glucosyltransferase | 7e-73 | |
| PLN02448 | 459 | PLN02448, PLN02448, UDP-glycosyltransferase family | 1e-71 | |
| PLN02173 | 449 | PLN02173, PLN02173, UDP-glucosyl transferase famil | 2e-64 | |
| PLN02210 | 456 | PLN02210, PLN02210, UDP-glucosyl transferase | 2e-57 | |
| PLN00164 | 480 | PLN00164, PLN00164, glucosyltransferase; Provision | 5e-57 | |
| PLN03007 | 482 | PLN03007, PLN03007, UDP-glucosyltransferase family | 1e-56 | |
| PLN02534 | 491 | PLN02534, PLN02534, UDP-glycosyltransferase | 2e-55 | |
| PLN02992 | 481 | PLN02992, PLN02992, coniferyl-alcohol glucosyltran | 2e-51 | |
| PLN03004 | 451 | PLN03004, PLN03004, UDP-glycosyltransferase | 2e-51 | |
| PLN02562 | 448 | PLN02562, PLN02562, UDP-glycosyltransferase | 2e-49 | |
| PLN02152 | 455 | PLN02152, PLN02152, indole-3-acetate beta-glucosyl | 8e-49 | |
| PLN02554 | 481 | PLN02554, PLN02554, UDP-glycosyltransferase family | 7e-48 | |
| PLN02207 | 468 | PLN02207, PLN02207, UDP-glycosyltransferase | 7e-47 | |
| PLN02863 | 477 | PLN02863, PLN02863, UDP-glucoronosyl/UDP-glucosyl | 4e-45 | |
| PLN02167 | 475 | PLN02167, PLN02167, UDP-glycosyltransferase family | 8e-42 | |
| PLN03015 | 470 | PLN03015, PLN03015, UDP-glucosyl transferase | 3e-38 | |
| PLN02670 | 472 | PLN02670, PLN02670, transferase, transferring glyc | 2e-37 | |
| PLN02764 | 453 | PLN02764, PLN02764, glycosyltransferase family pro | 6e-23 | |
| cd03784 | 401 | cd03784, GT1_Gtf_like, This family includes the Gt | 8e-22 | |
| pfam00201 | 500 | pfam00201, UDPGT, UDP-glucoronosyl and UDP-glucosy | 6e-20 | |
| PLN02208 | 442 | PLN02208, PLN02208, glycosyltransferase family pro | 7e-17 | |
| PLN00414 | 446 | PLN00414, PLN00414, glycosyltransferase family pro | 9e-16 | |
| PHA03392 | 507 | PHA03392, egt, ecdysteroid UDP-glucosyltransferase | 4e-11 | |
| COG1819 | 406 | COG1819, COG1819, Glycosyl transferases, related t | 7e-10 | |
| TIGR01426 | 392 | TIGR01426, MGT, glycosyltransferase, MGT family | 2e-09 |
| >gnl|CDD|178032 PLN02410, PLN02410, UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Score = 253 bits (647), Expect = 2e-79
Identities = 164/473 (34%), Positives = 248/473 (52%), Gaps = 45/473 (9%)
Query: 2 EKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYM 61
EK V ++P+PA GH++ M+ LA+ L G IT T+ Y FS
Sbjct: 3 EKPARRRVVLVPVPAQGHISPMMQLAKTLHLKGFSITIAQTKFNY----------FSPSD 52
Query: 62 QIPGFQFKTLTDGLPRDHPRT--PDKF-PELVDSLNCATPPLLKEMVSDSKSPVNCIITD 118
FQF T+ + LP + P +F +L + L ++V + + C++ D
Sbjct: 53 DFTDFQFVTIPESLPESDFKNLGPIEFLHKLNKECQVSFKDCLGQLVLQQGNEIACVVYD 112
Query: 119 GYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGEL--PIKGF---------- 166
+M A AA+E + + F T SA AF + D + A + P+K
Sbjct: 113 EFMYFAEAAAKEFKLPNVIFSTTSATAF-VCRSVFDKLYANNVLAPLKEPKGQQNELVPE 171
Query: 167 ---LRCRDLP--SFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNH 221
LRC+D P + + M+ + R T A +I+NT LE LS+++
Sbjct: 172 FHPLRCKDFPVSHWASLESIMELY-----RNTVDKRTASSVIINTASCLESSSLSRLQQQ 226
Query: 222 SCPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMS 281
+Y IGPL HL P +SL + ++SC+ WL+KQ K SVI+VS GS+A+M
Sbjct: 227 LQIPVYPIGPL--HLVASAP------TSLLEENKSCIEWLNKQKKNSVIFVSLGSLALME 278
Query: 282 RDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVL 341
++++E GL S + FLWVIRP + G + +P+E + RG I W PQ+EVL
Sbjct: 279 INEVMETASGLDSSNQQFLWVIRPGSVRGSEWIESLPKEFSKIISGRGYIVKWAPQKEVL 338
Query: 342 AHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRN 401
+H AVGGF +HCGWNSTLESI G+PMIC P +DQ++N+R++ VWK+G+ ++ DR
Sbjct: 339 SHPAVGGFWSHCGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEGDLDRG 398
Query: 402 IVEKAVNDLMVERK-EEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKMM 453
VE+AV LMVE + EE + A + + SV GGSS+ +L+ V+ ++ +
Sbjct: 399 AVERAVKRLMVEEEGEEMRKRAISLKEQLRASVISGGSSHNSLEEFVHFMRTL 451
|
Length = 451 |
| >gnl|CDD|178170 PLN02555, PLN02555, limonoid glucosyltransferase | Back alignment and domain information |
|---|
Score = 237 bits (605), Expect = 7e-73
Identities = 143/494 (28%), Positives = 245/494 (49%), Gaps = 58/494 (11%)
Query: 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHY----------YDRVI 50
+ VHV ++ P GHVN +L L +LL G+ +TF+ TE + D V+
Sbjct: 2 ESESSLVHVMLVSFPGQGHVNPLLRLGKLLASKGLLVTFVTTESWGKKMRQANKIQDGVL 61
Query: 51 RHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPDKFPELVDSLNCATPPLLKEMV---SD 107
+ D F R F+F DG D PR D + L + +V ++
Sbjct: 62 KPVGDGFIR------FEF--FEDGWAEDDPRRQD-LDLYLPQLELVGKREIPNLVKRYAE 112
Query: 108 SKSPVNCIITDGYMSRAIDAAREVGV-SIIYFRTISAC--AFWSFH---------CIPDI 155
PV+C+I + ++ D A E+G+ S + + AC A++ ++ P+I
Sbjct: 113 QGRPVSCLINNPFIPWVCDVAEELGIPSAVLWVQSCACFSAYYHYYHGLVPFPTETEPEI 172
Query: 156 IDAGELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHAD-----GLILNTFEDL 210
+LP L+ ++PSF + P F R L + + ++++TF++L
Sbjct: 173 --DVQLPCMPLLKYDEIPSFLHPSSP-----YPFLRRAILGQYKNLDKPFCILIDTFQEL 225
Query: 211 EGPILSQIRNHSCPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVI 270
E I+ + + CP I +GPL K+ + + K C+ WLD +P SV+
Sbjct: 226 EKEIIDYM-SKLCP-IKPVGPL---FKMAKTPNSDVKGDISKPADDCIEWLDSKPPSSVV 280
Query: 271 YVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGC 330
Y+SFG++ + ++Q+ E YG+++S SFLWV+RP + +PEE LE ++G
Sbjct: 281 YISFGTVVYLKQEQIDEIAYGVLNSGVSFLWVMRPPHKDSGVEPHVLPEEFLEKAGDKGK 340
Query: 331 IAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKL 390
I W PQE+VLAH +V F+THCGWNST+E++ +G+P++C+P + DQ ++ ++ +V+K
Sbjct: 341 IVQWCPQEKVLAHPSVACFVTHCGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKT 400
Query: 391 GLDI------KDLCDRNIVEKAVNDLMV-ERKEEFMESADRMANLAKKSVNKGGSSYCNL 443
G+ + L R V + + + V E+ E ++A + A+ +V +GGSS N
Sbjct: 401 GVRLCRGEAENKLITREEVAECLLEATVGEKAAELKQNALKWKEEAEAAVAEGGSSDRNF 460
Query: 444 DRLVNDIKMMSSQP 457
V+ + S +
Sbjct: 461 QEFVDKLVRKSVEI 474
|
Length = 480 |
| >gnl|CDD|215247 PLN02448, PLN02448, UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 233 bits (596), Expect = 1e-71
Identities = 143/485 (29%), Positives = 207/485 (42%), Gaps = 83/485 (17%)
Query: 8 HVAILPLPAVGHVNSMLNLAELLG--HAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPG 65
HV +P P GH+N M+NL +LL I ITF+ TE + + SD
Sbjct: 12 HVVAMPYPGRGHINPMMNLCKLLASRKPDILITFVVTEEWLGLI---GSDPKP-----DN 63
Query: 66 FQFKTLTDGLPRDHPRTPD--------------KFPELVDSLNCATPPLLKEMVSDSKSP 111
+F T+ + +P + R D F +L+D L P
Sbjct: 64 IRFATIPNVIPSELVRAADFPGFLEAVMTKMEAPFEQLLDRLE---------------PP 108
Query: 112 VNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELP--------- 162
V I+ D Y+ A+ + + T+SA F F+ + G P
Sbjct: 109 VTAIVADTYLFWAVGVGNRRNIPVASLWTMSATFFSVFYHFDLLPQNGHFPVELSESGEE 168
Query: 163 ----IKGF--LRCRDLPS-FCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPIL 215
I G R DLP F + + +L A L+ +F +LE +
Sbjct: 169 RVDYIPGLSSTRLSDLPPIFHGNSRRVLKRILEAFSWVP---KAQYLLFTSFYELEAQAI 225
Query: 216 SQIR-NHSCPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSF 274
++ P +Y IGP ++++ + SSS+ + WLD QP+ SV+YVS
Sbjct: 226 DALKSKFPFP-VYPIGPSIPYMEL---KDNSSSSNNEDNEPDYFQWLDSQPEGSVLYVSL 281
Query: 275 GSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGW 334
GS +S Q+ E GL S FLWV R ++ L E + G + W
Sbjct: 282 GSFLSVSSAQMDEIAAGLRDSGVRFLWVAR-------GEASR----LKEICGDMGLVVPW 330
Query: 335 VPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDI 394
Q +VL HS+VGGF THCGWNSTLE++ AG+PM+ +P F DQ +NS+ + E WK+G +
Sbjct: 331 CDQLKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRV 390
Query: 395 KD------LCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKS---VNKGGSSYCNLDR 445
K L R + + V M EE E R L + + KGGSS NLD
Sbjct: 391 KREVGEETLVGREEIAELVKRFMDLESEEGKEMRRRAKELQEICRGAIAKGGSSDTNLDA 450
Query: 446 LVNDI 450
+ DI
Sbjct: 451 FIRDI 455
|
Length = 459 |
| >gnl|CDD|177830 PLN02173, PLN02173, UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Score = 214 bits (545), Expect = 2e-64
Identities = 137/471 (29%), Positives = 243/471 (51%), Gaps = 44/471 (9%)
Query: 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRY 60
MEK HV +P P+ GH+ + + L G K T T ++ + S S
Sbjct: 1 MEKMRG-HVLAVPFPSQGHITPIRQFCKRLHSKGFKTTHTLTTFIFNTIHLDPSSPIS-- 57
Query: 61 MQIPGFQFKTLTDGLPRDHPRTPDKFPELVDSLNCATPPLLKEMV---SDSKSPVNCIIT 117
T++DG + + PE + + + +++ + +P+ CI+
Sbjct: 58 -------IATISDGYDQGGFSSAGSVPEYLQNFKTFGSKTVADIIRKHQSTDNPITCIVY 110
Query: 118 DGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAG-ELPIKG--FLRCRDLPS 174
D +M A+D ARE G++ F T +CA + + I + LPIK L +DLP+
Sbjct: 111 DSFMPWALDLAREFGLAAAPFFT-QSCAVNYINYLSYINNGSLTLPIKDLPLLELQDLPT 169
Query: 175 FCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDL---EGPILSQIRNHSCPNIYSIGP 231
F + + ++ AD +++N+F DL E +LS++ CP + +IGP
Sbjct: 170 FVTPTGSHLAYFEMVLQQFTNFDKADFVLVNSFHDLDLHENELLSKV----CP-VLTIGP 224
Query: 232 L--NAHLKVRIPEKTYSSSSLW--KIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIE 287
+ +L +I +L+ K C WLDK+P+ SV+Y++FGS+A +S +Q+ E
Sbjct: 225 TVPSMYLDQQIKSDNDYDLNLFDLKEAALCTDWLDKRPQGSVVYIAFGSMAKLSSEQMEE 284
Query: 288 FYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEAT-KERGCIAGWVPQEEVLAHSAV 346
+ S S+LWV+R E+++P LE K++ + W PQ +VL++ A+
Sbjct: 285 IASAI--SNFSYLWVVR------ASEESKLPPGFLETVDKDKSLVLKWSPQLQVLSNKAI 336
Query: 347 GGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKD-----LCDRN 401
G F+THCGWNST+E + G+PM+ P + DQ +N++++ +VWK+G+ +K + R
Sbjct: 337 GCFMTHCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAEKESGIAKRE 396
Query: 402 IVEKAVNDLMV-ERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIK 451
+E ++ ++M E+ +E E+A + +LA KS+++GGS+ N++ V+ I+
Sbjct: 397 EIEFSIKEVMEGEKSKEMKENAGKWRDLAVKSLSEGGSTDININTFVSKIQ 447
|
Length = 449 |
| >gnl|CDD|215127 PLN02210, PLN02210, UDP-glucosyl transferase | Back alignment and domain information |
|---|
Score = 196 bits (498), Expect = 2e-57
Identities = 144/479 (30%), Positives = 243/479 (50%), Gaps = 67/479 (13%)
Query: 8 HVAILPLPAVGHVNSMLNLAE--LLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPG 65
HV ++ L GH+N ML LA+ L + T TE D + + + R + +
Sbjct: 10 HVLMVTLAFQGHINPMLKLAKHLSLSSKNLHFTLATTEQARD--LLSTVEKPRRPVDLVF 67
Query: 66 FQFKTLTDGLPRDHPRTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS--R 123
F +DGLP+D PR P+ L+ SLN L +++ + + +CII+ +
Sbjct: 68 F-----SDGLPKDDPRAPET---LLKSLNKVGAKNLSKIIEEKR--YSCIISSPFTPWVP 117
Query: 124 AIDAAREVGVSIIYFRTISACAFWSFH--------CIPDIIDAG---ELPIKGFLRCRDL 172
A+ AA + +I++ I AC +S + PD+ D ELP L RDL
Sbjct: 118 AVAAAHNIPCAILW---IQACGAYSVYYRYYMKTNSFPDLEDLNQTVELPALPLLEVRDL 174
Query: 173 PSFCRVNDPMDPHLLL--FARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPNIYSIG 230
PSF + + L+ FA R + +++N+F +LE I+ + + + IG
Sbjct: 175 PSFMLPSGGAHFNNLMAEFADCLR---YVKWVLVNSFYELESEIIESMAD--LKPVIPIG 229
Query: 231 PLNAHLKVRIPE-KTYSSSSL--WKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIE 287
PL + + E +T +L K D CM WLDKQ + SV+Y+SFGS+ +Q+
Sbjct: 230 PLVSPFLLGDDEEETLDGKNLDMCKSDDCCMEWLDKQARSSVVYISFGSMLESLENQVET 289
Query: 288 FYYGLVHSKKSFLWVIRPDLISGKDGEN-QIPEELLEATKERGCIAGWVPQEEVLAHSAV 346
L + FLWVIRP + +N Q+ +E+++ + G + W PQE++L+H A+
Sbjct: 290 IAKALKNRGVPFLWVIRPK----EKAQNVQVLQEMVKEGQ--GVVLEWSPQEKILSHMAI 343
Query: 347 GGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKA 406
F+THCGWNST+E++VAG+P++ +PS+ DQ I++R + +V+ +G+ +++ +
Sbjct: 344 SCFVTHCGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRN-------DAV 396
Query: 407 VNDLMVERKEEFMES-------------ADRMANLAKKSVNKGGSSYCNLDRLVNDIKM 452
+L VE E +E+ A + ++A+ ++ GGSS NLD ++DI +
Sbjct: 397 DGELKVEEVERCIEAVTEGPAAADIRRRAAELKHVARLALAPGGSSARNLDLFISDITI 455
|
Length = 456 |
| >gnl|CDD|215084 PLN00164, PLN00164, glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 195 bits (497), Expect = 5e-57
Identities = 148/499 (29%), Positives = 227/499 (45%), Gaps = 72/499 (14%)
Query: 9 VAILPLPAVGHVNSMLNLAE-LLGHAG---IKITFL----NTEHYYDRVIRH-----SSD 55
V +LP+ GH+ SML + LL +G + +T L T V H +S
Sbjct: 6 VVLLPVWGSGHLMSMLEAGKRLLASSGGGALSLTVLVMPPPTPESASEVAAHVRREAASG 65
Query: 56 AFSRYMQIPGFQFKTLTDGLPRDHPRTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCI 115
R+ +P + T G ++F L+ P ++ ++ PV +
Sbjct: 66 LDIRFHHLPAVEPPTDAAG--------VEEFISRYIQLHA---PHVRAAIAGLSCPVAAL 114
Query: 116 ITDGYMSRAIDAAREVGV-SIIYFRTISACAFWSFHC-IPDIIDA---------GELPIK 164
+ D + + +D ARE+ V + +YF S A + +P + + G + +
Sbjct: 115 VVDFFCTPLLDVARELAVPAYVYF--TSTAAMLALMLRLPALDEEVAVEFEEMEGAVDVP 172
Query: 165 GF--LRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHS 222
G + LP+ V D P+ F R A G+I+NT +LE +L+ I +
Sbjct: 173 GLPPVPASSLPAP--VMDKKSPNYAWFVYHGRRFMEAAGIIVNTAAELEPGVLAAIADGR 230
Query: 223 C------PNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGS 276
C P +Y IGP+ I + + C+ WLD QP SV+++ FGS
Sbjct: 231 CTPGRPAPTVYPIGPV-------ISLAFTPPAE--QPPHECVRWLDAQPPASVVFLCFGS 281
Query: 277 IAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGK------DGENQIPEELLEATKERGC 330
+ Q+ E GL S FLWV+R +G D + +PE LE TK RG
Sbjct: 282 MGFFDAPQVREIAAGLERSGHRFLWVLRGPPAAGSRHPTDADLDELLPEGFLERTKGRGL 341
Query: 331 I-AGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINS----RFVG 385
+ W PQ+E+LAH+AVGGF+THCGWNS LES+ G+PM WP +A+Q +N+ +G
Sbjct: 342 VWPTWAPQKEILAHAAVGGFVTHCGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMG 401
Query: 386 EVWKLGLDIKD--LCDRNIVEKAVNDLMVERKEE---FMESADRMANLAKKSVNKGGSSY 440
+ +D K + +E+AV LM +EE E A M +K+V +GGSSY
Sbjct: 402 VAVAMKVDRKRDNFVEAAELERAVRSLMGGGEEEGRKAREKAAEMKAACRKAVEEGGSSY 461
Query: 441 CNLDRLVNDIKMMSSQPQN 459
L RL +I+ + P
Sbjct: 462 AALQRLAREIRHGAVAPTR 480
|
Length = 480 |
| >gnl|CDD|178584 PLN03007, PLN03007, UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Score = 194 bits (495), Expect = 1e-56
Identities = 145/494 (29%), Positives = 231/494 (46%), Gaps = 61/494 (12%)
Query: 2 EKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYM 61
+ +H+ P A GH+ L++A+L G K T L T ++ +AF
Sbjct: 1 MNHEKLHILFFPFMAHGHMIPTLDMAKLFSSRGAKSTILTTP-LNAKIFEKPIEAFKN-- 57
Query: 62 QIPG-------FQFKTLTDGLPRDHPRTP-----------DKFPELVDSLNCATPPLLKE 103
PG F F + GLP D F + + S L E
Sbjct: 58 LNPGLEIDIQIFNFPCVELGLPEGCENVDFITSNNNDDSGDLFLKFLFSTKYFKDQL--E 115
Query: 104 MVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCI-----PDIIDA 158
+ ++ P +C++ D + A +AA + GV + F + + +CI + +
Sbjct: 116 KLLETTRP-DCLVADMFFPWATEAAEKFGVPRLVFHGTGYFSLCASYCIRVHKPQKKVAS 174
Query: 159 GELPIKGFLRCRDLPSFC-----RVND-----PMDPHLLLFARETRLS-AHADGLILNTF 207
P F+ DLP ++ND PM F +E R S + G+++N+F
Sbjct: 175 SSEP---FV-IPDLPGDIVITEEQINDADEESPMGK----FMKEVRESEVKSFGVLVNSF 226
Query: 208 EDLEGPILSQIRNHSCPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQ 267
+LE ++ + IGPL+ + + EK ++ C+ WLD +
Sbjct: 227 YELESAYADFYKSFVAKRAWHIGPLSLYNR-GFEEKAERGKKANIDEQECLKWLDSKKPD 285
Query: 268 SVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKE 327
SVIY+SFGS+A +QL E GL S ++F+WV+R + + + E +PE E TK
Sbjct: 286 SVIYLSFGSVASFKNEQLFEIAAGLEGSGQNFIWVVRKN-ENQGEKEEWLPEGFEERTKG 344
Query: 328 RG-CIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGE 386
+G I GW PQ +L H A GGF+THCGWNS LE + AG+PM+ WP A+Q N + V +
Sbjct: 345 KGLIIRGWAPQVLILDHQATGGFVTHCGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQ 404
Query: 387 VWKLGLDI---------KDLCDRNIVEKAVNDLMV-ERKEEFMESADRMANLAKKSVNKG 436
V + G+ + D R VEKAV +++V E EE A ++A +AK +V +G
Sbjct: 405 VLRTGVSVGAKKLVKVKGDFISREKVEKAVREVIVGEEAEERRLRAKKLAEMAKAAVEEG 464
Query: 437 GSSYCNLDRLVNDI 450
GSS+ +L++ + ++
Sbjct: 465 GSSFNDLNKFMEEL 478
|
Length = 482 |
| >gnl|CDD|215293 PLN02534, PLN02534, UDP-glycosyltransferase | Back alignment and domain information |
|---|
Score = 191 bits (487), Expect = 2e-55
Identities = 149/501 (29%), Positives = 228/501 (45%), Gaps = 62/501 (12%)
Query: 3 KQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEH---YYDRVIRHSSDAF-- 57
K +H ++PL A GH+ M+++A LL G+ ++ + T + + I + ++
Sbjct: 5 KAKQLHFVLIPLMAQGHMIPMIDMARLLAERGVIVSLVTTPQNASRFAKTIDRARESGLP 64
Query: 58 SRYMQIPGFQFKTLTDGLPRDHPRTPDKFP--ELVDSLNCATPPL---LKEMVSDSKSPV 112
R +QIP F K + GLP D P +L+ A L L+ + +K P
Sbjct: 65 IRLVQIP-FPCKEV--GLPIGC-ENLDTLPSRDLLRKFYDAVDKLQQPLERFLEQAKPPP 120
Query: 113 NCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCI-------PDIIDAGELPIKG 165
+CII+D +S A+ + I F + + S H I D+ + G
Sbjct: 121 SCIISDKCLSWTSKTAQRFNIPRIVFHGMCCFSLLSSHNIRLHNAHLSVSSDSEPFVVPG 180
Query: 166 F------LRCR------DLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGP 213
R + LP V + M RE +A G+++N+F +LE
Sbjct: 181 MPQSIEITRAQLPGAFVSLPDLDDVRNKM--------REAESTAF--GVVVNSFNELEHG 230
Query: 214 ILSQIRNHSCPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVS 273
++ +GP++ K R +K + + C+ WLD +SVIY
Sbjct: 231 CAEAYEKAIKKKVWCVGPVSLCNK-RNLDKFERGNKASIDETQCLEWLDSMKPRSVIYAC 289
Query: 274 FGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERG-CIA 332
GS+ + QLIE GL SKK F+WVI+ + E + E E K RG I
Sbjct: 290 LGSLCRLVPSQLIELGLGLEASKKPFIWVIKTGEKHSELEEWLVKENFEERIKGRGLLIK 349
Query: 333 GWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGL 392
GW PQ +L+H A+GGFLTHCGWNST+E I +G+PMI WP FA+Q +N + + EV ++G+
Sbjct: 350 GWAPQVLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGV 409
Query: 393 DI--------------KDLCDRNIVEKAVNDLMVERKEEFMESADRMANL---AKKSVNK 435
+ L ++ VEKAV LM + EE R L A+K++
Sbjct: 410 RVGVEVPVRWGDEERVGVLVKKDEVEKAVKTLMDDGGEEGERRRRRAQELGVMARKAMEL 469
Query: 436 GGSSYCNLDRLVNDIKMMSSQ 456
GGSS+ NL L+ D+ S
Sbjct: 470 GGSSHINLSILIQDVLKQQSL 490
|
Length = 491 |
| >gnl|CDD|178572 PLN02992, PLN02992, coniferyl-alcohol glucosyltransferase | Back alignment and domain information |
|---|
Score = 180 bits (458), Expect = 2e-51
Identities = 145/500 (29%), Positives = 232/500 (46%), Gaps = 98/500 (19%)
Query: 8 HVAILPLPAVGHVNSMLNLAE-LLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGF 66
H A+ P +GHV ++ L + L + G +T E ++ A S+++ G
Sbjct: 7 HAAMFSSPGMGHVIPVIELGKRLSANHGFHVTVFVLE-------TDAASAQSKFLNSTGV 59
Query: 67 QFKTL----TDGL--PRDHPRTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGY 120
L GL P H T ++ + A P L ++ + P I+ D +
Sbjct: 60 DIVGLPSPDISGLVDPSAHVVT-----KIGVIMREAVPTLRSKIAEMHQKPTALIV-DLF 113
Query: 121 MSRAI---------------DAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELPIKG 165
+ A+ AR +GVSI Y+ T+ H + L + G
Sbjct: 114 GTDALCLGGEFNMLTYIFIASNARFLGVSI-YYPTLDK-DIKEEH----TVQRKPLAMPG 167
Query: 166 FLRCRDLPSFCRVNDPMDPHLLL-------FARETRLSAHADGLILNTFEDLEGPILSQI 218
C + R D +D +L+ F R ADG+++NT+E++E L +
Sbjct: 168 ---CEPV----RFEDTLDAYLVPDEPVYRDFVRHGLAYPKADGILVNTWEEMEPKSLKSL 220
Query: 219 RNHSCPN------IYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYV 272
++ +Y IGPL ++ KT D + WL+KQP +SV+Y+
Sbjct: 221 QDPKLLGRVARVPVYPIGPLCRPIQ---SSKT---------DHPVLDWLNKQPNESVLYI 268
Query: 273 SFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRP--------DLISGKDGENQ------IP 318
SFGS +S QL E +GL S++ F+WV+RP S GE + +P
Sbjct: 269 SFGSGGSLSAKQLTELAWGLEMSQQRFVWVVRPPVDGSACSAYFSANGGETRDNTPEYLP 328
Query: 319 EELLEATKERG-CIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQ 377
E + T +RG + W PQ E+LAH AVGGFLTHCGW+STLES+V G+PMI WP FA+Q
Sbjct: 329 EGFVSRTHDRGFVVPSWAPQAEILAHQAVGGFLTHCGWSSTLESVVGGVPMIAWPLFAEQ 388
Query: 378 QINSRFVGEVWKLGL-----DIKDLCDRNIVEKAVNDLMVERK-EEFMESADRMANLAKK 431
+N+ + + +LG+ D K++ R+ +E V +MVE + EE ++ + A+
Sbjct: 389 NMNAALLSD--ELGIAVRSDDPKEVISRSKIEALVRKVMVEEEGEEMRRKVKKLRDTAEM 446
Query: 432 --SVNKGGSSYCNLDRLVND 449
S++ GG ++ +L R+ +
Sbjct: 447 SLSIDGGGVAHESLCRVTKE 466
|
Length = 481 |
| >gnl|CDD|178581 PLN03004, PLN03004, UDP-glycosyltransferase | Back alignment and domain information |
|---|
Score = 179 bits (456), Expect = 2e-51
Identities = 135/464 (29%), Positives = 229/464 (49%), Gaps = 52/464 (11%)
Query: 9 VAILPLPAVGHVNSMLNLAELL----GHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIP 64
+ + P P +GH+ SM+ L + + I I + + + + S S + P
Sbjct: 6 IVLYPAPPIGHLVSMVELGKTILSKNPSLSIHIILVPPPYQPESTATYISSVSSSF---P 62
Query: 65 GFQFKTLTDGLPRDHPRTPDKFPE--LVDSLNCATPPLLKEMVSDSKS-PVNCIITDGYM 121
F L P T E L++ L + P + + + S S++ V +I D +
Sbjct: 63 SITFHHLPAVTPYSSSSTSRHHHESLLLEILCFSNPSVHRTLFSLSRNFNVRAMIIDFFC 122
Query: 122 SRAIDAAREVGVSIIYFRTI-SACAFWSFHC--------------IPDIIDAGELPIKGF 166
+ +D + + +F T +AC +SF+ IP + G P+KG
Sbjct: 123 TAVLDITADFTFPVYFFYTSGAACLAFSFYLPTIDETTPGKNLKDIPTVHIPGVPPMKG- 181
Query: 167 LRCRDLP-SFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSC-P 224
D+P + +D + ++F ++ S+ G+I+NTF+ LE + I C
Sbjct: 182 ---SDMPKAVLERDDEVYDVFIMFGKQLSKSS---GIIINTFDALENRAIKAITEELCFR 235
Query: 225 NIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQ 284
NIY IGPL + RI ++ + + SC+ WLD QP++SV+++ FGS+ + S++Q
Sbjct: 236 NIYPIGPLI--VNGRIEDRNDNKAV------SCLNWLDSQPEKSVVFLCFGSLGLFSKEQ 287
Query: 285 LIEFYYGLVHSKKSFLWVIR--PDLISGK-DGENQIPEELLEATKERG-CIAGWVPQEEV 340
+IE GL S + FLWV+R P+L + D ++ +PE L T+++G + W PQ V
Sbjct: 288 VIEIAVGLEKSGQRFLWVVRNPPELEKTELDLKSLLPEGFLSRTEDKGMVVKSWAPQVPV 347
Query: 341 LAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKD---- 396
L H AVGGF+THCGWNS LE++ AG+PM+ WP +A+Q+ N + + K+ + + +
Sbjct: 348 LNHKAVGGFVTHCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNESETG 407
Query: 397 LCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSY 440
VEK V +++ E E M N A+ ++ + GSS+
Sbjct: 408 FVSSTEVEKRVQEIIGE--CPVRERTMAMKNAAELALTETGSSH 449
|
Length = 451 |
| >gnl|CDD|215305 PLN02562, PLN02562, UDP-glycosyltransferase | Back alignment and domain information |
|---|
Score = 174 bits (442), Expect = 2e-49
Identities = 128/471 (27%), Positives = 204/471 (43%), Gaps = 59/471 (12%)
Query: 9 VAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQF 68
+ ++P PA GHV ML LA G + + E + R+ + G F
Sbjct: 9 IILVPYPAQGHVTPMLKLASAFLSRGFEPVVITPEFIHRRIS-------ATLDPKLGITF 61
Query: 69 KTLTDGLPRDHPRTPDKFPELVDSLNCATPPLLKEMVS--DSKSPVNCIITDGYMSRAID 126
+++DG D PR F + +S+ PP L+ ++ D V C++ D S AI
Sbjct: 62 MSISDGQDDDPPR---DFFSIENSMENTMPPQLERLLHKLDEDGEVACMVVDLLASWAIG 118
Query: 127 AAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELPIKG---------FLRCR------D 171
A GV + F + A+ IP+++ G + G L + D
Sbjct: 119 VADRCGVPVAGFWPVMLAAYRLIQAIPELVRTGLISETGCPRQLEKICVLPEQPLLSTED 178
Query: 172 LPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNH-------SCP 224
LP + R + +++N+F+D E ++NH P
Sbjct: 179 LPWLIGTPKARKARFKFWTRTLERTKSLRWILMNSFKDEE---YDDVKNHQASYNNGQNP 235
Query: 225 NIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGS-IAVMSRD 283
I IGPL+ I + S W+ D SC+ WL +Q SVIY+SFGS ++ +
Sbjct: 236 QILQIGPLHNQEATTI-----TKPSFWEEDMSCLGWLQEQKPNSVIYISFGSWVSPIGES 290
Query: 284 QLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAH 343
+ L S + F+WV+ P G +P +E ++G + W PQ EVL H
Sbjct: 291 NVRTLALALEASGRPFIWVLNPVWREG------LPPGYVERVSKQGKVVSWAPQLEVLKH 344
Query: 344 SAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIV 403
AVG +LTHCGWNST+E+I ++C+P DQ +N ++ +VWK+G+ I + V
Sbjct: 345 QAVGCYLTHCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRISGFGQKE-V 403
Query: 404 EKAVNDLM--VERKEEFMESADR-MANLAKKSVNKGGSSYCNLDRLVNDIK 451
E+ + +M E M+ +R M A+ S N L +++K
Sbjct: 404 EEGLRKVMEDSGMGERLMKLRERAMGEEARL------RSMMNFTTLKDELK 448
|
Length = 448 |
| >gnl|CDD|177813 PLN02152, PLN02152, indole-3-acetate beta-glucosyltransferase | Back alignment and domain information |
|---|
Score = 172 bits (438), Expect = 8e-49
Identities = 132/465 (28%), Positives = 214/465 (46%), Gaps = 37/465 (7%)
Query: 8 HVAILPLPAVGHVNSMLNLAE-LLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGF 66
H ++ PA GHVN L A L+ G ++TF R + + +
Sbjct: 5 HFLLVTFPAQGHVNPSLRFARRLIKTTGTRVTFATCLSVIHRSM------IPNHNNVENL 58
Query: 67 QFKTLTDGLPRDHPRTPDKFPELVDSLNCATPPLLKEMVSDSK---SPVNCIITDGYMSR 123
F T +DG D + + L + + + SPV C+I +
Sbjct: 59 SFLTFSDGFDDGVISNTDDVQNRLVNFERNGDKALSDFIEANLNGDSPVTCLIYTILPNW 118
Query: 124 AIDAAREVGVSIIYFRTISACAF--WSFHCIPDIIDAGELPIKGFLRCRDLPSFCRVNDP 181
A AR + + A F + + + E P L RDLPSF ++
Sbjct: 119 APKVARRFHLPSVLLWIQPAFVFDIYYNYSTGNN-SVFEFPNLPSLEIRDLPSFLSPSNT 177
Query: 182 MDPHLLLFAR--ETRLSAHADGLILNTFEDLEGPILSQIRNHSCPNI--YSIGPLNAHLK 237
++ E +++NTF+ LE L+ I PNI ++GPL L
Sbjct: 178 NKAAQAVYQELMEFLKEESNPKILVNTFDSLEPEFLTAI-----PNIEMVAVGPL---LP 229
Query: 238 VRIPEKTYSSSSLWKIDRSC--MAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHS 295
I + S L D+S WLD + + SVIYVSFG++ +S+ Q+ E L+
Sbjct: 230 AEIFTGSESGKDLSVRDQSSSYTLWLDSKTESSVIYVSFGTMVELSKKQIEELARALIEG 289
Query: 296 KKSFLWVI--RPDLISGKDGENQIPEELLEATK----ERGCIAGWVPQEEVLAHSAVGGF 349
K+ FLWVI + + + +GE + E + + E G I W Q EVL H AVG F
Sbjct: 290 KRPFLWVITDKLNREAKIEGEEETEIEKIAGFRHELEEVGMIVSWCSQIEVLRHRAVGCF 349
Query: 350 LTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKD----LCDRNIVEK 405
+THCGW+S+LES+V G+P++ +P ++DQ N++ + E+WK G+ +++ L +R + +
Sbjct: 350 VTHCGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEGLVERGEIRR 409
Query: 406 AVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDI 450
+ +M E+ E ESA++ LA ++ +GGSS N++ V +
Sbjct: 410 CLEAVMEEKSVELRESAEKWKRLAIEAGGEGGSSDKNVEAFVKTL 454
|
Length = 455 |
| >gnl|CDD|215304 PLN02554, PLN02554, UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 171 bits (434), Expect = 7e-48
Identities = 135/492 (27%), Positives = 209/492 (42%), Gaps = 74/492 (15%)
Query: 12 LPLPAVGHVNSMLNLAELL----GHAGIKITFLNTEH-------YYDRVIRHSSDAFSRY 60
+P P +GH+ + LA+LL I + + + Y + SS+ RY
Sbjct: 8 IPSPGIGHLRPTVELAKLLVDSDDRLSITVIIIPSRSGDDASSSAYIASLSASSEDRLRY 67
Query: 61 MQIPGFQFKTLTDGLPRDH-----PRTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCI 115
I T D + + P+ D +LVD + + P L V
Sbjct: 68 EVISAGDQPTTEDPTFQSYIDNQKPKVRDAVAKLVDDSSTPSSPRLAGFV---------- 117
Query: 116 ITDGYMSRAIDAAREVGVSIIYFRTISACAF-WSFHCIPDIIDAGELPIKGFLRCR---D 171
D + + ID A E GV F T +A H + + D + + D
Sbjct: 118 -VDMFCTSMIDVANEFGVPSYMFYTSNATFLGLQLH-VQMLYDEKKYDVSELEDSEVELD 175
Query: 172 LPSFCRVNDPMD----PHLL-------LFARETRLSAHADGLILNTFEDLEGPILSQIRN 220
+PS R P P +L LF + R G+++NT +LE L
Sbjct: 176 VPSLTR---PYPVKCLPSVLLSKEWLPLFLAQARRFREMKGILVNTVAELEPQALKFFSG 232
Query: 221 HS--CPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIA 278
S P +Y +GP+ HL+ + S +I R WLD+QP +SV+++ FGS+
Sbjct: 233 SSGDLPPVYPVGPV-LHLENSGDDSKDEKQS--EILR----WLDEQPPKSVVFLCFGSMG 285
Query: 279 VMSRDQLIEFYYGLVHSKKSFLWVIR---PDLISGKDG-----ENQIPEELLEATKERGC 330
S +Q E L S FLW +R P+++ G E +PE L+ TK+ G
Sbjct: 286 GFSEEQAREIAIALERSGHRFLWSLRRASPNIMKEPPGEFTNLEEILPEGFLDRTKDIGK 345
Query: 331 IAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKL 390
+ GW PQ VLA A+GGF+THCGWNS LES+ G+PM WP +A+Q+ N+ + E L
Sbjct: 346 VIGWAPQVAVLAKPAIGGFVTHCGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGL 405
Query: 391 GLDIKDLCDRNIVEKAVNDLMVERKEE----FMESADRMANLAKKSVNK-------GGSS 439
++I+ +++ + + E E ME + K+ K GGSS
Sbjct: 406 AVEIRKYWRGDLLAGEMETVTAEEIERGIRCLMEQDSDVRKRVKEMSEKCHVALMDGGSS 465
Query: 440 YCNLDRLVNDIK 451
+ L + + D+
Sbjct: 466 HTALKKFIQDVT 477
|
Length = 481 |
| >gnl|CDD|177857 PLN02207, PLN02207, UDP-glycosyltransferase | Back alignment and domain information |
|---|
Score = 168 bits (426), Expect = 7e-47
Identities = 125/482 (25%), Positives = 229/482 (47%), Gaps = 58/482 (12%)
Query: 6 HVHVAILPLPAVGHVNSMLNLAELLGHAG--IKITFL----NTEHYYDRVIRH--SSDAF 57
+ + +P P VGH+ L A L I+IT L + + D ++ SS F
Sbjct: 3 NAELIFIPTPTVGHLVPFLEFARRLIEQDDRIRITILLMKLQGQSHLDTYVKSIASSQPF 62
Query: 58 SRYMQIPGFQFKTLTDGLPRDHPRTPDKFPELVDSLNCATPPLLKEMVSDSKSP------ 111
R++ +P + K G D + + PL++ +V D S
Sbjct: 63 VRFIDVPELEEKPTLGGTQSVEAYVYDVIEKNI--------PLVRNIVMDILSSLALDGV 114
Query: 112 -VNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPD---------IIDAGE- 160
V + D + ID A++V + F T ++ + D + ++ E
Sbjct: 115 KVKGFVADFFCLPMIDVAKDVSLPFYVFLTTNSGFLAMMQYLADRHSKDTSVFVRNSEEM 174
Query: 161 LPIKGFLR---CRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQ 217
L I GF+ LPS V D D ++ L L A+G+++N+ D+E ++
Sbjct: 175 LSIPGFVNPVPANVLPSALFVEDGYDAYVKL----AILFTKANGILVNSSFDIEPYSVNH 230
Query: 218 -IRNHSCPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGS 276
+ + P++Y++GP+ + + + L + D M WLD QP+ SV+++ FGS
Sbjct: 231 FLDEQNYPSVYAVGPI-----FDLKAQPHPEQDLARRDEL-MKWLDDQPEASVVFLCFGS 284
Query: 277 IAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVP 336
+ + + E +GL + FLW +R + ++ D +PE L+ RG I GW P
Sbjct: 285 MGRLRGPLVKEIAHGLELCQYRFLWSLRTEEVTNDD---LLPEGFLDRVSGRGMICGWSP 341
Query: 337 QEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIK- 395
Q E+LAH AVGGF++HCGWNS +ES+ G+P++ WP +A+QQ+N+ + + KL +++K
Sbjct: 342 QVEILAHKAVGGFVSHCGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKL 401
Query: 396 -------DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVN 448
++ + N +E A+ +M + + ++ + +++ GGSS+ +++ ++
Sbjct: 402 DYRVHSDEIVNANEIETAIRCVMNKDNNVVRKRVMDISQMIQRATKNGGSSFAAIEKFIH 461
Query: 449 DI 450
D+
Sbjct: 462 DV 463
|
Length = 468 |
| >gnl|CDD|215465 PLN02863, PLN02863, UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Score = 163 bits (414), Expect = 4e-45
Identities = 125/469 (26%), Positives = 214/469 (45%), Gaps = 36/469 (7%)
Query: 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFL----NTEHYYDRVIRHSSDAFSRYMQI 63
HV + P PA GH+ +L+L L G+ IT L N + +H S + +
Sbjct: 11 HVLVFPFPAQGHMIPLLDLTHRLALRGLTITVLVTPKNLPFLNPLLSKHPS---IETLVL 67
Query: 64 PGFQFKTLTDGLPRDHPRTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSR 123
P ++ G+ P FP ++ +L PLL S PV II+D ++
Sbjct: 68 PFPSHPSIPSGVENVKDLPPSGFPLMIHALGELYAPLLSWFRSHPSPPV-AIISDMFLGW 126
Query: 124 AIDAAREVGVSIIYFR---TISACAFWS-FHCIPDIIDA---------GELPIKGFLRCR 170
+ A ++G+ F ++ +S + +P I+ ++P
Sbjct: 127 TQNLACQLGIRRFVFSPSGAMALSIMYSLWREMPTKINPDDQNEILSFSKIPNCPKYPWW 186
Query: 171 DLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNH-SCPNIYSI 229
+ S R DP R + + GL++N+F +LEG L ++ ++++
Sbjct: 187 QISSLYRSYVEGDPAWEFIKDSFRANIASWGLVVNSFTELEGIYLEHLKKELGHDRVWAV 246
Query: 230 GPLN--AHLKVRIPEKTYSSS-SLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLI 286
GP+ + K + E+ SS S+ + M WLD V+YV FGS V++++Q+
Sbjct: 247 GPILPLSGEKSGLMERGGPSSVSVDDV----MTWLDTCEDHKVVYVCFGSQVVLTKEQME 302
Query: 287 EFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERG-CIAGWVPQEEVLAHSA 345
GL S F+W ++ + ++ + + IP + RG I GW PQ +L+H A
Sbjct: 303 ALASGLEKSGVHFIWCVK-EPVNEESDYSNIPSGFEDRVAGRGLVIRGWAPQVAILSHRA 361
Query: 346 VGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDI----KDLCDRN 401
VG FLTHCGWNS LE +VAG+PM+ WP ADQ +N+ + + K+ + + + D +
Sbjct: 362 VGAFLTHCGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGADTVPDSD 421
Query: 402 IVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDI 450
+ + + + E + E E A + A ++ + GSS +LD V +
Sbjct: 422 ELARVFMESVSENQVE-RERAKELRRAALDAIKERGSSVKDLDGFVKHV 469
|
Length = 477 |
| >gnl|CDD|215112 PLN02167, PLN02167, UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 154 bits (390), Expect = 8e-42
Identities = 126/490 (25%), Positives = 214/490 (43%), Gaps = 77/490 (15%)
Query: 11 ILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYM--QIPGFQF 68
+P P+ GH+ + A+ L + +I + ++ + DAF + + P +
Sbjct: 8 FVPFPSTGHILVTIEFAKRLINLDRRIHTITILYWSLPFAPQA-DAFLKSLIASEPRIRL 66
Query: 69 KTLTDGLPRDHPRTP----DKFPE--LVDSLNCATPPLLKEMVSDSKSP--------VNC 114
TL P P K E +++ + PL+++ +S S V
Sbjct: 67 VTL----PEVQDPPPMELFVKASEAYILEFVK-KMVPLVRDALSTLVSSRDESDSVRVAG 121
Query: 115 IITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPD---II--------DAGELPI 163
++ D + ID E + F T +A +P+ ELPI
Sbjct: 122 LVLDFFCVPLIDVGNEFNLPSYIFLTCNAGFLGMMKYLPERHRKTASEFDLSSGEEELPI 181
Query: 164 KGFLRCRDLPSFCRVNDPMDPHLLLFARETRLS--------AHADGLILNTFEDLEGPIL 215
GF+ V + P L F +E+ + A G+++N+F +LE
Sbjct: 182 PGFV--------NSVPTKVLPPGL-FMKESYEAWVEIAERFPEAKGILVNSFTELEPNAF 232
Query: 216 SQI--RNHSCPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRS-CMAWLDKQPKQSVIYV 272
+ P +Y +GP+ + K +S +L DR M WLD QP+ SV+++
Sbjct: 233 DYFSRLPENYPPVYPVGPI-------LSLKDRTSPNLDSSDRDRIMRWLDDQPESSVVFL 285
Query: 273 SFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIA 332
FGS+ + Q+ E L FLW IR + +PE ++ RG +
Sbjct: 286 CFGSLGSLPAPQIKEIAQALELVGCRFLWSIRTNPAEYASPYEPLPEGFMDRVMGRGLVC 345
Query: 333 GWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGL 392
GW PQ E+LAH A+GGF++HCGWNS LES+ G+P+ WP +A+QQ+N+ + + L +
Sbjct: 346 GWAPQVEILAHKAIGGFVSHCGWNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAV 405
Query: 393 DIK--------DLCDRNIVEKAVNDLM----VERKEEFMESADRMANLAKKSVNKGGSSY 440
+++ ++ + + AV LM V RK+ +A A+K+V GGSS+
Sbjct: 406 ELRLDYVSAYGEIVKADEIAGAVRSLMDGEDVPRKK-----VKEIAEAARKAVMDGGSSF 460
Query: 441 CNLDRLVNDI 450
+ R ++D+
Sbjct: 461 VAVKRFIDDL 470
|
Length = 475 |
| >gnl|CDD|178589 PLN03015, PLN03015, UDP-glucosyl transferase | Back alignment and domain information |
|---|
Score = 144 bits (364), Expect = 3e-38
Identities = 84/267 (31%), Positives = 142/267 (53%), Gaps = 34/267 (12%)
Query: 199 ADGLILNTFEDLEGPILSQIRNHSCPN------IYSIGPLNAHLKVRIPEKTYSSSSLWK 252
+DG+++NT+E+L+G L+ +R N +Y IGP+ VR ++ +
Sbjct: 205 SDGVLVNTWEELQGNTLAALREDMELNRVMKVPVYPIGPI-----VR-------TNVHVE 252
Query: 253 IDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDL----I 308
S WLDKQ ++SV+YV GS ++ +Q +E +GL S + F+WV+R
Sbjct: 253 KRNSIFEWLDKQGERSVVYVCLGSGGTLTFEQTVELAWGLELSGQRFVWVLRRPASYLGA 312
Query: 309 SGKDGEN---QIPEELLEATKERG-CIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVA 364
S D + +PE L+ T+ G + W PQ E+L+H ++GGFL+HCGW+S LES+
Sbjct: 313 SSSDDDQVSASLPEGFLDRTRGVGLVVTQWAPQVEILSHRSIGGFLSHCGWSSVLESLTK 372
Query: 365 GMPMICWPSFADQQINSRFVGE-----VWKLGLDIKDLCDRNIVEKAVNDLMVERKEEFM 419
G+P++ WP +A+Q +N+ + E V L + + R V V ++ E EE
Sbjct: 373 GVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPSEKVIGREEVASLVRKIVAEEDEEGQ 432
Query: 420 ESADRMANL---AKKSVNKGGSSYCNL 443
+ + + ++++ + GGSSY +L
Sbjct: 433 KIRAKAEEVRVSSERAWSHGGSSYNSL 459
|
Length = 470 |
| >gnl|CDD|178275 PLN02670, PLN02670, transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Score = 142 bits (359), Expect = 2e-37
Identities = 126/460 (27%), Positives = 218/460 (47%), Gaps = 50/460 (10%)
Query: 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRY 60
M++++ +HVA+ P A+GH+ L L++LL G KI+F++T R+ + S S
Sbjct: 1 MKREEVLHVAMFPWLAMGHLIPFLRLSKLLAQKGHKISFISTPRNLHRLPKIPSQ-LSSS 59
Query: 61 MQIPGFQFKTLTDGLPRDHPRTPD----KFPELVDSLNCATPPLLKEMVSDSKSPVNCII 116
+ + F ++ GLP + D K L + + PPL + ++ P + II
Sbjct: 60 ITLVSFPLPSVP-GLPSSAESSTDVPYTKQQLLKKAFDLLEPPLTTFL--ETSKP-DWII 115
Query: 117 TDGYMSRAIDA-AREVGVSIIYFRTISACAFWSFHCIPD-IIDAGEL------------- 161
D Y S + + A E+G+S +F +A A SF P +++ G+L
Sbjct: 116 YD-YASHWLPSIAAELGISKAFFSLFTA-ATLSFIGPPSSLMEGGDLRSTAEDFTVVPPW 173
Query: 162 -PIKGFL--RCRDLPSFCR-----VNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGP 213
P + + R ++ + P D FA +D +I+ + + E
Sbjct: 174 VPFESNIVFRYHEVTKYVEKTEEDETGPSDSVRFGFA-----IGGSDVVIIRSSPEFEPE 228
Query: 214 ILSQIRNHSCPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVS 273
+ + I IG L ++ + T +I WLDKQ SV+YV+
Sbjct: 229 WFDLLSDLYRKPIIPIGFLPPVIEDDEEDDTIDVKGWVRIKE----WLDKQRVNSVVYVA 284
Query: 274 FGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCI-A 332
G+ A + R+++ E GL S+ F WV+R + + ++ +P+ E K RG I
Sbjct: 285 LGTEASLRREEVTELALGLEKSETPFFWVLRNEPGTTQNALEMLPDGFEERVKGRGMIHV 344
Query: 333 GWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFV-GEVWKLG 391
GWVPQ ++L+H +VGGFLTHCGWNS +E + G +I +P +Q +N+R + G+ KLG
Sbjct: 345 GWVPQVKILSHESVGGFLTHCGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGK--KLG 402
Query: 392 LDI-KDLCDRNIVEKAVNDLMVERKEEFMESADRMANLAK 430
L++ +D D + +V + + R ++ + + + AK
Sbjct: 403 LEVPRDERDGSFTSDSVAESV--RLAMVDDAGEEIRDKAK 440
|
Length = 472 |
| >gnl|CDD|178364 PLN02764, PLN02764, glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 100 bits (250), Expect = 6e-23
Identities = 109/466 (23%), Positives = 188/466 (40%), Gaps = 89/466 (19%)
Query: 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIP-GF 66
HV + P A GH+ L LA L G +TFL + + + P
Sbjct: 7 HVLMYPWFATGHMTPFLFLANKLAEKGHTVTFL--------LPKKALKQLEHLNLFPHNI 58
Query: 67 QFKTLT----DGLPRDHPRTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS 122
F+++T DGLP E V + + LL + ++ V ++
Sbjct: 59 VFRSVTVPHVDGLPVG--------TETVSEIPVTSADLLMSAMDLTRDQVEVVV------ 104
Query: 123 RAID--------------AAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELPI----- 163
RA++ AR+ G+ + + +SA S ++ GEL +
Sbjct: 105 RAVEPDLIFFDFAHWIPEVARDFGLKTVKYVVVSASTIASM-----LVPGGELGVPPPGY 159
Query: 164 ---KGFLRCRD------LPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPI 214
K LR +D L ++ + P+LL R T ++D + + T ++EG
Sbjct: 160 PSSKVLLRKQDAYTMKNLEPTNTID--VGPNLL--ERVTTSLMNSDVIAIRTAREIEGNF 215
Query: 215 LSQIRNHSCPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSF 274
I H + GP+ P+KT W + WL SV++ +
Sbjct: 216 CDYIEKHCRKKVLLTGPVFPE-----PDKTRELEERW------VKWLSGYEPDSVVFCAL 264
Query: 275 GSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCI-AG 333
GS ++ +DQ E G+ + FL ++P S + +PE E K RG + G
Sbjct: 265 GSQVILEKDQFQELCLGMELTGSPFLVAVKPPRGSSTI-QEALPEGFEERVKGRGVVWGG 323
Query: 334 WVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLD 393
WV Q +L+H +VG F++HCG+ S ES+++ ++ P DQ +N+R + + K+ ++
Sbjct: 324 WVQQPLILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVE 383
Query: 394 I----KDLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNK 435
+ + + A+N +M E + NL KK+ K
Sbjct: 384 VAREETGWFSKESLRDAINSVMKRDSE--------IGNLVKKNHTK 421
|
Length = 453 |
| >gnl|CDD|99960 cd03784, GT1_Gtf_like, This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Score = 96.7 bits (241), Expect = 8e-22
Identities = 66/438 (15%), Positives = 119/438 (27%), Gaps = 69/438 (15%)
Query: 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQ 67
V I + + G V ++ LA L AG ++ + D V + + G
Sbjct: 2 RVLITTIGSRGDVQPLVALAWALRAAGHEVRVATPPEFADLVEAAGLEFVP----VGGDP 57
Query: 68 FKTLTDGLPRDHPRTPDKFPELVDSLNCATPPLLKEMVSDS-----KSPVNCIITDGYMS 122
+ L L + M+ D + ++ D
Sbjct: 58 DELLASPERNAGLLLLGPGLLLGALRLLR--REAEAMLDDLVAAARDWGPDLVVADPLAF 115
Query: 123 RAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELPIKG--FLRCRDLPSFCRVND 180
AA +G+ + PD + P G LR L D
Sbjct: 116 AGAVAAEALGIP-------AVRLLLG----PDTPTSAFPPPLGRANLRLYALLEAELWQD 164
Query: 181 PMDPHLLLFARETRLSAHADGLILNTFEDLEGPILS---QIRNHSCPNIYSIGPLNAHLK 237
+ L R L + + E + G +
Sbjct: 165 LLGAWLRARRRRLGLPPLSLLDGSDVPELYGFSPAVLPPPPDWPRFDLVTGYGFRDVPYN 224
Query: 238 VRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQL----IEFYYGLV 293
P + LW +L +YV FGS+ V + L +E +
Sbjct: 225 GPPPPE------LW-------LFLAAGRP--PVYVGFGSMVVRDPEALARLDVEA---VA 266
Query: 294 HSKKSFLWVIRP-DLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTH 352
+ + + L + +N + +VP + +L + H
Sbjct: 267 TLGQRAILSLGWGGLGAEDLPDN-------------VRVVDFVPHDWLLPR--CAAVVHH 311
Query: 353 CGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLD-IKDLCDRNIVEKAVNDLM 411
G +T ++ AG+P + P F DQ + V E G + A+ L+
Sbjct: 312 GGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAE-LGAGPALDPRELTAERLAAALRRLL 370
Query: 412 VERKEEFMESADRMANLA 429
+A + +
Sbjct: 371 --DPPSRRRAAALLRRIR 386
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. Length = 401 |
| >gnl|CDD|201077 pfam00201, UDPGT, UDP-glucoronosyl and UDP-glucosyl transferase | Back alignment and domain information |
|---|
Score = 91.7 bits (228), Expect = 6e-20
Identities = 54/250 (21%), Positives = 91/250 (36%), Gaps = 45/250 (18%)
Query: 188 LFARETRLS---AHADGLILNTFEDLEGPILSQIRNHSCPNIYSIGPLNAHLKVRIPEKT 244
L R L + A +L + DLE P PN+ IG LN P K
Sbjct: 213 LLGRPVTLPELMSKASAWLLRNYWDLEFP------RPLLPNMEFIGGLNCK-----PAK- 260
Query: 245 YSSSSLWKIDRSCMAWLDKQP--KQSVIYVSFGSIAV-MSRDQLIEFYYGLVHSKKSFLW 301
Q + V+ S GS+ + ++ E L + LW
Sbjct: 261 ---------PLPQEMEAFVQSSGEHGVVVFSLGSMVSNIPEEKANEIASALAQIPQKVLW 311
Query: 302 VIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLES 361
G P L T+ + W+PQ ++L H F+TH G N E+
Sbjct: 312 RFD-----GTK-----PSTLGRNTR----LVKWLPQNDLLGHPKTRAFVTHAGSNGVYEA 357
Query: 362 IVAGMPMICWPSFADQQINSRFVGEVWKLG-LDIKDLCDRNIVEKAVNDLMVERKEEFME 420
I G+PM+ P F DQ N++ + L++ + + + A+ ++ + E
Sbjct: 358 ICHGVPMVGMPLFGDQMDNAKHMEAKGAAVTLNVLTMTSED-LLNALKTVI--NDPSYKE 414
Query: 421 SADRMANLAK 430
+ R++++
Sbjct: 415 NIMRLSSIHH 424
|
Length = 500 |
| >gnl|CDD|177858 PLN02208, PLN02208, glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 82.0 bits (202), Expect = 7e-17
Identities = 99/409 (24%), Positives = 167/409 (40%), Gaps = 58/409 (14%)
Query: 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFL-------NTEH---YYDRVIRHSSDAF 57
H + P A GH+ L+LA L G ++TFL EH + D ++ H
Sbjct: 6 HAFMFPWFAFGHMIPFLHLANKLAEKGHRVTFLLPKKAQKQLEHHNLFPDSIVFHP---- 61
Query: 58 SRYMQIPGFQFKTLTDGLPRDHPRTPDKFPELVDSLNCATPPLLKEMVSDSKSPV--NCI 115
+ IP +GLP T D P +D+L L ++ V + + + I
Sbjct: 62 ---LTIPP------VNGLPAGAETTSD-IPISMDNLLSEALDLTRDQVEAAVRALRPDLI 111
Query: 116 ITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELPIKGFLRCRDLPS- 174
D + + A+E + + + +SA H + G+L + PS
Sbjct: 112 FFD-FAQWIPEMAKEHMIKSVSYIIVSATTIAHTH-----VPGGKLGV----PPPGYPSS 161
Query: 175 --FCRVNDPMDPHLL------LFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPNI 226
R ND L L+ + T D + L T +++EG I +
Sbjct: 162 KVLFRENDAHALATLSIFYKRLYHQITTGLKSCDVIALRTCKEIEGKFCDYISRQYHKKV 221
Query: 227 YSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLI 286
GP+ PE S ++ +L P +SV++ S GS ++ +DQ
Sbjct: 222 LLTGPM-------FPEPDTSKP----LEEQWSHFLSGFPPKSVVFCSLGSQIILEKDQFQ 270
Query: 287 EFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCI-AGWVPQEEVLAHSA 345
E G+ + FL ++P S E +PE E K RG + GWV Q +L H +
Sbjct: 271 ELCLGMELTGLPFLIAVKPPRGSSTVQEG-LPEGFEERVKGRGVVWGGWVQQPLILDHPS 329
Query: 346 VGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDI 394
+G F+ HCG + ES+V+ M+ P +DQ + +R + E +++ +++
Sbjct: 330 IGCFVNHCGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEV 378
|
Length = 442 |
| >gnl|CDD|177807 PLN00414, PLN00414, glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 78.9 bits (194), Expect = 9e-16
Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 11/209 (5%)
Query: 188 LFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPNIYSIGPLNAHLKVRIPEKTYSS 247
LF T+ + D + + T +LEG + I + GP+ +PE S
Sbjct: 182 LFGLITKGLKNCDVVSIRTCVELEGNLCDFIERQCQRKVLLTGPM-------LPEPQNKS 234
Query: 248 SSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDL 307
+ DR WL+ SV++ +FG+ +DQ EF G+ + FL + P
Sbjct: 235 GKPLE-DR-WNHWLNGFEPGSVVFCAFGTQFFFEKDQFQEFCLGMELTGLPFLIAVMPPK 292
Query: 308 ISGKDGENQIPEELLEATKERGCI-AGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGM 366
S E +PE E K RG + GWV Q +L+H +VG F+ HCG+ S ES+V+
Sbjct: 293 GSSTVQE-ALPEGFEERVKGRGIVWEGWVEQPLILSHPSVGCFVNHCGFGSMWESLVSDC 351
Query: 367 PMICWPSFADQQINSRFVGEVWKLGLDIK 395
++ P ADQ + +R + E ++ + ++
Sbjct: 352 QIVFIPQLADQVLITRLLTEELEVSVKVQ 380
|
Length = 446 |
| >gnl|CDD|223071 PHA03392, egt, ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 64.6 bits (158), Expect = 4e-11
Identities = 48/199 (24%), Positives = 75/199 (37%), Gaps = 36/199 (18%)
Query: 224 PNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSI---AVM 280
P++ +G L HL + P+ +D +L+ V+YVSFGS M
Sbjct: 265 PSVQYLGGL--HLHKKPPQP---------LDDYLEEFLNN-STNGVVYVSFGSSIDTNDM 312
Query: 281 SRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEV 340
+ L + LW ++ + N + W PQ V
Sbjct: 313 DNEFLQMLLRTFKKLPYNVLWKYDGEVEAINLPANVL-------------TQKWFPQRAV 359
Query: 341 LAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLG----LDIKD 396
L H V F+T G ST E+I A +PM+ P DQ N+ + +LG LD
Sbjct: 360 LKHKNVKAFVTQGGVQSTDEAIDALVPMVGLPMMGDQFYNTN---KYVELGIGRALDTVT 416
Query: 397 LCDRNIVEKAVNDLMVERK 415
+ + A+ D++ K
Sbjct: 417 V-SAAQLVLAIVDVIENPK 434
|
Length = 507 |
| >gnl|CDD|224732 COG1819, COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Score = 60.1 bits (146), Expect = 7e-10
Identities = 40/181 (22%), Positives = 82/181 (45%), Gaps = 35/181 (19%)
Query: 260 WLDKQPKQSVIYVSFGSIAVMSR------DQLIEFYYGLVHSKKSFLWVIRPDLISGKDG 313
W+ ++YVS G++ + L + ++ S L +D
Sbjct: 232 WIPADRP--IVYVSLGTVGNAVELLAIVLEALADLDVRVIVS-----------LGGARDT 278
Query: 314 ENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPS 373
+P+ ++ +A +VPQ E+L + + H G +T E++ AG+P++ P
Sbjct: 279 LVNVPDNVI--------VADYVPQLELLPRADA--VIHHGGAGTTSEALYAGVPLVVIPD 328
Query: 374 FADQQINSRFVGEVWKLG--LDIKDLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKK 431
ADQ +N+ V E+ G L ++L + + AVN+++ + + + +A+R+A K+
Sbjct: 329 GADQPLNAERVEEL-GAGIALPFEELTEERLRA-AVNEVLAD--DSYRRAAERLAEEFKE 384
Query: 432 S 432
Sbjct: 385 E 385
|
Length = 406 |
| >gnl|CDD|233407 TIGR01426, MGT, glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Score = 59.3 bits (144), Expect = 2e-09
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 10/95 (10%)
Query: 334 WVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLD 393
WVPQ E+L + F+TH G NST+E++ G+PM+ P ADQ + +R + E LGL
Sbjct: 282 WVPQLEILKKADA--FITHGGMNSTMEALFNGVPMVAVPQGADQPMTARRIAE---LGLG 336
Query: 394 IKDLCDRNIVEK---AVNDLMVERKEEFMESADRM 425
+ EK AV ++ + + E +M
Sbjct: 337 RHLPPEEVTAEKLREAVLAVLSD--PRYAERLRKM 369
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production [Cellular processes, Toxin production and resistance]. Length = 392 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 460 | |||
| PLN02410 | 451 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 100.0 | |
| PLN02562 | 448 | UDP-glycosyltransferase | 100.0 | |
| PLN02555 | 480 | limonoid glucosyltransferase | 100.0 | |
| PLN02173 | 449 | UDP-glucosyl transferase family protein | 100.0 | |
| PLN02207 | 468 | UDP-glycosyltransferase | 100.0 | |
| PLN02863 | 477 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 100.0 | |
| PLN02210 | 456 | UDP-glucosyl transferase | 100.0 | |
| PLN02152 | 455 | indole-3-acetate beta-glucosyltransferase | 100.0 | |
| PLN02448 | 459 | UDP-glycosyltransferase family protein | 100.0 | |
| PLN02670 | 472 | transferase, transferring glycosyl groups | 100.0 | |
| PLN00164 | 480 | glucosyltransferase; Provisional | 100.0 | |
| PLN02992 | 481 | coniferyl-alcohol glucosyltransferase | 100.0 | |
| PLN02764 | 453 | glycosyltransferase family protein | 100.0 | |
| PLN02208 | 442 | glycosyltransferase family protein | 100.0 | |
| PLN03007 | 482 | UDP-glucosyltransferase family protein | 100.0 | |
| PLN02534 | 491 | UDP-glycosyltransferase | 100.0 | |
| PLN03015 | 470 | UDP-glucosyl transferase | 100.0 | |
| PLN02554 | 481 | UDP-glycosyltransferase family protein | 100.0 | |
| PLN02167 | 475 | UDP-glycosyltransferase family protein | 100.0 | |
| PLN03004 | 451 | UDP-glycosyltransferase | 100.0 | |
| PLN00414 | 446 | glycosyltransferase family protein | 100.0 | |
| PHA03392 | 507 | egt ecdysteroid UDP-glucosyltransferase; Provision | 100.0 | |
| PF00201 | 500 | UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera | 100.0 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 100.0 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 100.0 | |
| COG1819 | 406 | Glycosyl transferases, related to UDP-glucuronosyl | 100.0 | |
| KOG1192 | 496 | consensus UDP-glucuronosyl and UDP-glucosyl transf | 100.0 | |
| PRK12446 | 352 | undecaprenyldiphospho-muramoylpentapeptide beta-N- | 99.96 | |
| PF13528 | 318 | Glyco_trans_1_3: Glycosyl transferase family 1 | 99.95 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 99.92 | |
| TIGR00661 | 321 | MJ1255 conserved hypothetical protein. This model | 99.92 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.86 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.82 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.76 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 99.76 | |
| COG4671 | 400 | Predicted glycosyl transferase [General function p | 99.74 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.7 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 99.7 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 99.66 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.62 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.54 | |
| PF04101 | 167 | Glyco_tran_28_C: Glycosyltransferase family 28 C-t | 99.5 | |
| PF03033 | 139 | Glyco_transf_28: Glycosyltransferase family 28 N-t | 99.42 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 99.41 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 99.37 | |
| COG3980 | 318 | spsG Spore coat polysaccharide biosynthesis protei | 99.36 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 99.35 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 99.27 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 99.25 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 99.2 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 99.18 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 99.16 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.11 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 99.11 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 99.09 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 99.09 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 99.09 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.07 | |
| PF04007 | 335 | DUF354: Protein of unknown function (DUF354); Inte | 99.05 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 99.04 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 99.03 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 99.01 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 98.99 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 98.99 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 98.97 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 98.94 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 98.91 | |
| PRK14089 | 347 | ipid-A-disaccharide synthase; Provisional | 98.91 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 98.9 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 98.89 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 98.85 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 98.84 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 98.83 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 98.79 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 98.78 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 98.77 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 98.77 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 98.7 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 98.69 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 98.66 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 98.64 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 98.64 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 98.63 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 98.63 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 98.55 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 98.53 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 98.53 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 98.47 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 98.46 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 98.45 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 98.42 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 98.42 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 98.4 | |
| KOG3349 | 170 | consensus Predicted glycosyltransferase [General f | 98.37 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 98.36 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 98.35 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 98.3 | |
| PLN00142 | 815 | sucrose synthase | 98.3 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 98.29 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 98.29 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 98.27 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 98.24 | |
| PLN02316 | 1036 | synthase/transferase | 98.15 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 98.11 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 98.1 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 98.04 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 97.87 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 97.84 | |
| COG5017 | 161 | Uncharacterized conserved protein [Function unknow | 97.8 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 97.73 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 97.69 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 97.67 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 97.58 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 97.58 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 97.57 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 97.55 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 97.53 | |
| PRK10017 | 426 | colanic acid biosynthesis protein; Provisional | 97.31 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 97.3 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 97.29 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 97.27 | |
| PRK10916 | 348 | ADP-heptose:LPS heptosyltransferase II; Provisiona | 97.21 | |
| PRK10422 | 352 | lipopolysaccharide core biosynthesis protein; Prov | 97.15 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 97.11 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 97.05 | |
| PF13477 | 139 | Glyco_trans_4_2: Glycosyl transferase 4-like | 96.92 | |
| PF06722 | 97 | DUF1205: Protein of unknown function (DUF1205); In | 96.92 | |
| COG1817 | 346 | Uncharacterized protein conserved in archaea [Func | 96.91 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 96.89 | |
| TIGR02193 | 319 | heptsyl_trn_I lipopolysaccharide heptosyltransfera | 96.86 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 96.8 | |
| COG0859 | 334 | RfaF ADP-heptose:LPS heptosyltransferase [Cell env | 96.7 | |
| TIGR02195 | 334 | heptsyl_trn_II lipopolysaccharide heptosyltransfer | 96.6 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 96.56 | |
| TIGR02201 | 344 | heptsyl_trn_III lipopolysaccharide heptosyltransfe | 96.47 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 95.91 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 95.78 | |
| cd03789 | 279 | GT1_LPS_heptosyltransferase Lipopolysaccharide hep | 95.71 | |
| COG3914 | 620 | Spy Predicted O-linked N-acetylglucosamine transfe | 95.65 | |
| PF01975 | 196 | SurE: Survival protein SurE; InterPro: IPR002828 T | 95.29 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 95.17 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 94.89 | |
| PF08660 | 170 | Alg14: Oligosaccharide biosynthesis protein Alg14 | 93.41 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 93.08 | |
| PRK13932 | 257 | stationary phase survival protein SurE; Provisiona | 92.38 | |
| PF06258 | 311 | Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP | 92.27 | |
| COG0496 | 252 | SurE Predicted acid phosphatase [General function | 91.95 | |
| PRK13933 | 253 | stationary phase survival protein SurE; Provisiona | 91.68 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 91.39 | |
| cd02067 | 119 | B12-binding B12 binding domain (B12-BD). This doma | 91.31 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 91.28 | |
| PRK02261 | 137 | methylaspartate mutase subunit S; Provisional | 90.94 | |
| TIGR00087 | 244 | surE 5'/3'-nucleotidase SurE. E. coli SurE is Reco | 90.9 | |
| PF12000 | 171 | Glyco_trans_4_3: Gkycosyl transferase family 4 gro | 90.85 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 90.68 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 90.55 | |
| PF02951 | 119 | GSH-S_N: Prokaryotic glutathione synthetase, N-ter | 89.96 | |
| PRK00346 | 250 | surE 5'(3')-nucleotidase/polyphosphatase; Provisio | 89.85 | |
| PRK13935 | 253 | stationary phase survival protein SurE; Provisiona | 89.23 | |
| COG0003 | 322 | ArsA Predicted ATPase involved in chromosome parti | 89.2 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 88.7 | |
| COG1618 | 179 | Predicted nucleotide kinase [Nucleotide transport | 88.26 | |
| PF09314 | 185 | DUF1972: Domain of unknown function (DUF1972); Int | 88.04 | |
| COG4370 | 412 | Uncharacterized protein conserved in bacteria [Fun | 87.57 | |
| COG2894 | 272 | MinD Septum formation inhibitor-activating ATPase | 87.19 | |
| COG0052 | 252 | RpsB Ribosomal protein S2 [Translation, ribosomal | 86.84 | |
| PRK13931 | 261 | stationary phase survival protein SurE; Provisiona | 86.75 | |
| PRK02797 | 322 | 4-alpha-L-fucosyltransferase; Provisional | 86.53 | |
| PRK13934 | 266 | stationary phase survival protein SurE; Provisiona | 86.07 | |
| PF02441 | 129 | Flavoprotein: Flavoprotein; InterPro: IPR003382 Th | 86.02 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 85.26 | |
| PF02374 | 305 | ArsA_ATPase: Anion-transporting ATPase; PDB: 2WOO_ | 85.15 | |
| cd01425 | 193 | RPS2 Ribosomal protein S2 (RPS2), involved in form | 84.6 | |
| cd02070 | 201 | corrinoid_protein_B12-BD B12 binding domain of cor | 83.85 | |
| PRK05647 | 200 | purN phosphoribosylglycinamide formyltransferase; | 83.57 | |
| PF04413 | 186 | Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid | 83.56 | |
| PRK01077 | 451 | cobyrinic acid a,c-diamide synthase; Validated | 83.33 | |
| PF00731 | 150 | AIRC: AIR carboxylase; InterPro: IPR000031 Phospho | 83.27 | |
| smart00851 | 90 | MGS MGS-like domain. This domain composes the whol | 82.91 | |
| PRK05973 | 237 | replicative DNA helicase; Provisional | 82.56 | |
| PRK10964 | 322 | ADP-heptose:LPS heptosyl transferase I; Provisiona | 82.37 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 81.59 | |
| PF10649 | 159 | DUF2478: Protein of unknown function (DUF2478); In | 81.02 |
| >PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-62 Score=480.90 Aligned_cols=429 Identities=36% Similarity=0.592 Sum_probs=330.7
Q ss_pred CCC-CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCC
Q 012587 1 MEK-QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDH 79 (460)
Q Consensus 1 ~~~-~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (460)
||. .+..||+++|++++||++|++.||+.|+.+|+.|||++++.+.... ... ..++.|..+|++++++.
T Consensus 1 ~~~~~~~~HVvlvPfpaqGHi~P~l~LAk~La~~G~~VT~v~T~~n~~~~--~~~--------~~~i~~~~ip~glp~~~ 70 (451)
T PLN02410 1 MEEKPARRRVVLVPVPAQGHISPMMQLAKTLHLKGFSITIAQTKFNYFSP--SDD--------FTDFQFVTIPESLPESD 70 (451)
T ss_pred CCcCCCCCEEEEECCCccccHHHHHHHHHHHHcCCCEEEEEeCccccccc--ccC--------CCCeEEEeCCCCCCccc
Confidence 664 3456999999999999999999999999999999999998764211 100 23589999998887642
Q ss_pred CCCCCChHHHHHHHHhhCcHHHHHHHHcC----CCCccEEEEcCCcchHHHHHHHhCCceEEEecchhHHHHHHhhcccc
Q 012587 80 PRTPDKFPELVDSLNCATPPLLKEMVSDS----KSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDI 155 (460)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~ 155 (460)
.+. .....++..+...+.+.++++++++ ..++++||+|.+..|+..+|+++|||++.++++++.....+.+++..
T Consensus 71 ~~~-~~~~~~~~~~~~~~~~~~~~~L~~l~~~~~~p~~cVI~D~f~~Wa~dvA~~lgIP~v~F~t~~a~~~~~~~~~~~~ 149 (451)
T PLN02410 71 FKN-LGPIEFLHKLNKECQVSFKDCLGQLVLQQGNEIACVVYDEFMYFAEAAAKEFKLPNVIFSTTSATAFVCRSVFDKL 149 (451)
T ss_pred ccc-cCHHHHHHHHHHHhHHHHHHHHHHHHhccCCCcEEEEECCcchHHHHHHHHcCCCEEEEEccCHHHHHHHHHHHHH
Confidence 221 2334555556555677777777764 23579999999999999999999999999999998876655443211
Q ss_pred ccC-------C-------CCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhc
Q 012587 156 IDA-------G-------ELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNH 221 (460)
Q Consensus 156 ~~~-------~-------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~ 221 (460)
... . .+|....++..+++.... .........+... ....+++.+++|+|++||+..++.++.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~iPg~~~~~~~dlp~~~~--~~~~~~~~~~~~~-~~~~~~~~vlvNTf~eLE~~~~~~l~~- 225 (451)
T PLN02410 150 YANNVLAPLKEPKGQQNELVPEFHPLRCKDFPVSHW--ASLESIMELYRNT-VDKRTASSVIINTASCLESSSLSRLQQ- 225 (451)
T ss_pred HhccCCCCccccccCccccCCCCCCCChHHCcchhc--CCcHHHHHHHHHH-hhcccCCEEEEeChHHhhHHHHHHHHh-
Confidence 110 0 011111133344443221 1112222322222 234678899999999999999999986
Q ss_pred CC-CceeEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEE
Q 012587 222 SC-PNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFL 300 (460)
Q Consensus 222 ~~-~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i 300 (460)
.. ++++.|||+........ ..+..+.++.+|||.+++++||||||||....+.+.+..++.+|+..+.+||
T Consensus 226 ~~~~~v~~vGpl~~~~~~~~--------~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gLe~s~~~Fl 297 (451)
T PLN02410 226 QLQIPVYPIGPLHLVASAPT--------SLLEENKSCIEWLNKQKKNSVIFVSLGSLALMEINEVMETASGLDSSNQQFL 297 (451)
T ss_pred ccCCCEEEecccccccCCCc--------cccccchHHHHHHHhCCCCcEEEEEccccccCCHHHHHHHHHHHHhcCCCeE
Confidence 55 68999999975422100 1122334678999998889999999999999999999999999999999999
Q ss_pred EEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceecccccccchhh
Q 012587 301 WVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQIN 380 (460)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~n 380 (460)
|+++.+...+......+|++|.++.++|.++++|+||.+||+|+++++||||||+||++||+++|||||++|+++||+.|
T Consensus 298 Wv~r~~~~~~~~~~~~lp~~f~er~~~~g~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~n 377 (451)
T PLN02410 298 WVIRPGSVRGSEWIESLPKEFSKIISGRGYIVKWAPQKEVLSHPAVGGFWSHCGWNSTLESIGEGVPMICKPFSSDQKVN 377 (451)
T ss_pred EEEccCcccccchhhcCChhHHHhccCCeEEEccCCHHHHhCCCccCeeeecCchhHHHHHHHcCCCEEeccccccCHHH
Confidence 99974321100111247999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhceeeeecCCcchHHHHHHHHHHHhH-hHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHh
Q 012587 381 SRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVE-RKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKM 452 (460)
Q Consensus 381 a~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~~-~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~ 452 (460)
|+++++.+|+|+.+.+.+++++|+++|+++|.+ ++.+||++|+++++++++++.+||+|.+++++||+.+..
T Consensus 378 a~~~~~~~~~G~~~~~~~~~~~v~~av~~lm~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~fv~~~~~ 450 (451)
T PLN02410 378 ARYLECVWKIGIQVEGDLDRGAVERAVKRLMVEEEGEEMRKRAISLKEQLRASVISGGSSHNSLEEFVHFMRT 450 (451)
T ss_pred HHHHHHHhCeeEEeCCcccHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Confidence 999976679999997789999999999999974 356899999999999999999999999999999998763
|
|
| >PLN02562 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-62 Score=478.89 Aligned_cols=425 Identities=29% Similarity=0.538 Sum_probs=328.2
Q ss_pred CCCCCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCC
Q 012587 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHP 80 (460)
Q Consensus 1 ~~~~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (460)
|++.+..||+++|+|++||++|++.||+.|+.+|+.|||++++.+...+..... . .++++|..+|++++.+.
T Consensus 1 ~~~~~~~HVVlvPfPaqGHi~PmL~LAk~Las~G~~VT~vtt~~~~~~~~~~~~----~---~~~i~~v~lp~g~~~~~- 72 (448)
T PLN02562 1 MKVTQRPKIILVPYPAQGHVTPMLKLASAFLSRGFEPVVITPEFIHRRISATLD----P---KLGITFMSISDGQDDDP- 72 (448)
T ss_pred CCCCCCcEEEEEcCccccCHHHHHHHHHHHHhCCCEEEEEeCcchhhhhhhccC----C---CCCEEEEECCCCCCCCc-
Confidence 566556799999999999999999999999999999999999887766544311 0 23589999988765432
Q ss_pred CCCCChHHHHHHHHhhCcHHHHHHHHcC-C-CCccEEEEcCCcchHHHHHHHhCCceEEEecchhHHHHHHhhccccccC
Q 012587 81 RTPDKFPELVDSLNCATPPLLKEMVSDS-K-SPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDA 158 (460)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~-~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 158 (460)
..++..+...+...+.+.++++++.+ . .++++||+|.+..|+..+|+++|||++.++++++.......+++.....
T Consensus 73 --~~~~~~l~~a~~~~~~~~l~~ll~~l~~~~pv~cvI~D~~~~w~~~vA~~~giP~~~f~~~~a~~~~~~~~~~~~~~~ 150 (448)
T PLN02562 73 --PRDFFSIENSMENTMPPQLERLLHKLDEDGEVACMVVDLLASWAIGVADRCGVPVAGFWPVMLAAYRLIQAIPELVRT 150 (448)
T ss_pred --cccHHHHHHHHHHhchHHHHHHHHHhcCCCCcEEEEECCccHhHHHHHHHhCCCEEEEechhHHHHHHHHHHHHHhhc
Confidence 22344444555445788888888876 2 2348999999999999999999999999999988766655443321111
Q ss_pred C---------------CCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHh----
Q 012587 159 G---------------ELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIR---- 219 (460)
Q Consensus 159 ~---------------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~---- 219 (460)
+ ..|....++..+++.++............+.+......+++.+++|||++||+..++...
T Consensus 151 ~~~~~~~~~~~~~~~~~~Pg~~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~ 230 (448)
T PLN02562 151 GLISETGCPRQLEKICVLPEQPLLSTEDLPWLIGTPKARKARFKFWTRTLERTKSLRWILMNSFKDEEYDDVKNHQASYN 230 (448)
T ss_pred cccccccccccccccccCCCCCCCChhhCcchhcCCCcchHHHHHHHHHHhccccCCEEEEcChhhhCHHHHHHHHhhhc
Confidence 0 011111134455554432211122334455555555677889999999999998777553
Q ss_pred -hcCCCceeEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcc-cCCHHHHHHHHHHHhhCCC
Q 012587 220 -NHSCPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIA-VMSRDQLIEFYYGLVHSKK 297 (460)
Q Consensus 220 -~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~-~~~~~~~~~~~~al~~~~~ 297 (460)
+ ..|+++.|||+........ ...+.+..+.++.+||+.++++++|||||||+. ..+.++++.++.+++..+.
T Consensus 231 ~~-~~~~v~~iGpl~~~~~~~~-----~~~~~~~~~~~c~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~l~~~l~~~g~ 304 (448)
T PLN02562 231 NG-QNPQILQIGPLHNQEATTI-----TKPSFWEEDMSCLGWLQEQKPNSVIYISFGSWVSPIGESNVRTLALALEASGR 304 (448)
T ss_pred cc-cCCCEEEecCccccccccc-----CCCccccchHHHHHHHhcCCCCceEEEEecccccCCCHHHHHHHHHHHHHCCC
Confidence 3 4578999999976432100 000122334567799998877899999999986 5688999999999999999
Q ss_pred cEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceecccccccc
Q 012587 298 SFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQ 377 (460)
Q Consensus 298 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ 377 (460)
+|||+++.+ ....+|+++.++.++|+++++|+||.+||+|+++++||||||+||++||+++|||||++|+++||
T Consensus 305 ~fiW~~~~~------~~~~l~~~~~~~~~~~~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ 378 (448)
T PLN02562 305 PFIWVLNPV------WREGLPPGYVERVSKQGKVVSWAPQLEVLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYPVAGDQ 378 (448)
T ss_pred CEEEEEcCC------chhhCCHHHHHHhccCEEEEecCCHHHHhCCCccceEEecCcchhHHHHHHcCCCEEeCCcccch
Confidence 999998642 11257888888889999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHhhhceeeeecCCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHH
Q 012587 378 QINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIK 451 (460)
Q Consensus 378 ~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~ 451 (460)
+.||+++++.+|+|+.+ ++.+.++|.++|+++|.+ ++||+||++++++++++ .+||+|.+++++||++++
T Consensus 379 ~~na~~~~~~~g~g~~~-~~~~~~~l~~~v~~~l~~--~~~r~~a~~l~~~~~~~-~~gGSS~~nl~~~v~~~~ 448 (448)
T PLN02562 379 FVNCAYIVDVWKIGVRI-SGFGQKEVEEGLRKVMED--SGMGERLMKLRERAMGE-EARLRSMMNFTTLKDELK 448 (448)
T ss_pred HHHHHHHHHHhCceeEe-CCCCHHHHHHHHHHHhCC--HHHHHHHHHHHHHHHhc-CCCCCHHHHHHHHHHHhC
Confidence 99999997557999888 568999999999999988 89999999999999887 667899999999999863
|
|
| >PLN02555 limonoid glucosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-61 Score=474.76 Aligned_cols=445 Identities=29% Similarity=0.545 Sum_probs=339.9
Q ss_pred CCCCC-CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccc--cc--cccccCCCCceEEecCCCC
Q 012587 1 MEKQD-HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSS--DA--FSRYMQIPGFQFKTLTDGL 75 (460)
Q Consensus 1 ~~~~~-~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~ 75 (460)
|++++ ..||+++|+|++||++|++.||+.|+.+|..|||++++.+...+.+... +. ... ....+.|..+|+++
T Consensus 1 ~~~~~~~~HVv~~PfpaqGHi~Pml~lA~~La~~G~~vT~v~T~~~~~~~~~a~~~~~~~~~~~--~~~~i~~~~~pdgl 78 (480)
T PLN02555 1 MESESSLVHVMLVSFPGQGHVNPLLRLGKLLASKGLLVTFVTTESWGKKMRQANKIQDGVLKPV--GDGFIRFEFFEDGW 78 (480)
T ss_pred CCCCCCCCEEEEECCcccccHHHHHHHHHHHHhCCCeEEEEeccchhhhhhccccccccccccC--CCCeEEEeeCCCCC
Confidence 56532 3699999999999999999999999999999999999877665543110 00 000 01126777778777
Q ss_pred CCCCCCCCCChHHHHHHHHhhCcHHHHHHHHcC--CCCc-cEEEEcCCcchHHHHHHHhCCceEEEecchhHHHHHHhhc
Q 012587 76 PRDHPRTPDKFPELVDSLNCATPPLLKEMVSDS--KSPV-NCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCI 152 (460)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~p-D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~ 152 (460)
+++... ..++..++..+...+.+.++++++.+ ..+| ++||+|.++.|+..+|+++|||++.++++++.....+.++
T Consensus 79 p~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~pv~ciV~D~~~~wa~~vA~~~gIP~~~F~t~~a~~~~~~~~~ 157 (480)
T PLN02555 79 AEDDPR-RQDLDLYLPQLELVGKREIPNLVKRYAEQGRPVSCLINNPFIPWVCDVAEELGIPSAVLWVQSCACFSAYYHY 157 (480)
T ss_pred CCCccc-ccCHHHHHHHHHHhhhHHHHHHHHHHhccCCCceEEEECCcchHHHHHHHHcCCCeEEeecccHHHHHHHHHH
Confidence 765321 23455566666555778888888765 1244 9999999999999999999999999999999888776665
Q ss_pred ccc---ccCC-------CCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcC
Q 012587 153 PDI---IDAG-------ELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHS 222 (460)
Q Consensus 153 ~~~---~~~~-------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~ 222 (460)
+.. .+.. .+|...-++..+++.++............+.+......+++.+++|||++||+..++.++. .
T Consensus 158 ~~~~~~~~~~~~~~~~~~iPglp~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~~~l~~-~ 236 (480)
T PLN02555 158 YHGLVPFPTETEPEIDVQLPCMPLLKYDEIPSFLHPSSPYPFLRRAILGQYKNLDKPFCILIDTFQELEKEIIDYMSK-L 236 (480)
T ss_pred hhcCCCcccccCCCceeecCCCCCcCHhhCcccccCCCCchHHHHHHHHHHHhcccCCEEEEEchHHHhHHHHHHHhh-C
Confidence 321 0100 0111112455666655432222334444455555556778899999999999999988876 5
Q ss_pred CCceeEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEE
Q 012587 223 CPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWV 302 (460)
Q Consensus 223 ~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~ 302 (460)
.+ ++.|||+........ .. ..+..+..++++.+||+.++++++|||||||+...+.+++..++.+++..+.+|||+
T Consensus 237 ~~-v~~iGPl~~~~~~~~-~~--~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~~l~~~~~~flW~ 312 (480)
T PLN02555 237 CP-IKPVGPLFKMAKTPN-SD--VKGDISKPADDCIEWLDSKPPSSVVYISFGTVVYLKQEQIDEIAYGVLNSGVSFLWV 312 (480)
T ss_pred CC-EEEeCcccCcccccc-cc--ccccccccchhHHHHHhCCCCCceeEEEeccccCCCHHHHHHHHHHHHhcCCeEEEE
Confidence 55 999999975321100 00 001223445679999998878899999999999999999999999999999999999
Q ss_pred EccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHH
Q 012587 303 IRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSR 382 (460)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~ 382 (460)
++.....+......+|+++.++.++|+++++|+||.+||.|+++++||||||+||++||+++|||||++|+++||+.||+
T Consensus 313 ~~~~~~~~~~~~~~lp~~~~~~~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~ 392 (480)
T PLN02555 313 MRPPHKDSGVEPHVLPEEFLEKAGDKGKIVQWCPQEKVLAHPSVACFVTHCGWNSTMEALSSGVPVVCFPQWGDQVTDAV 392 (480)
T ss_pred EecCcccccchhhcCChhhhhhcCCceEEEecCCHHHHhCCCccCeEEecCCcchHHHHHHcCCCEEeCCCccccHHHHH
Confidence 87421000001124788888888899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhceeeeec------CCcchHHHHHHHHHHHh-HhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHhh
Q 012587 383 FVGEVWKLGLDIK------DLCDRNIVEKAVNDLMV-ERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKMM 453 (460)
Q Consensus 383 ~~~e~~G~g~~~~------~~~~~~~l~~~i~~~l~-~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~~ 453 (460)
++++++|+|+.+. +.++.++|.++|+++|. ++|.++|+||++|++..++++.+||+|.+++++||+++...
T Consensus 393 ~~~~~~gvGv~l~~~~~~~~~v~~~~v~~~v~~vm~~~~g~~~r~ra~~l~~~a~~A~~egGSS~~~l~~~v~~i~~~ 470 (480)
T PLN02555 393 YLVDVFKTGVRLCRGEAENKLITREEVAECLLEATVGEKAAELKQNALKWKEEAEAAVAEGGSSDRNFQEFVDKLVRK 470 (480)
T ss_pred HHHHHhCceEEccCCccccCcCcHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhc
Confidence 9987779999993 35899999999999996 55789999999999999999999999999999999999866
|
|
| >PLN02173 UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-61 Score=471.45 Aligned_cols=430 Identities=29% Similarity=0.531 Sum_probs=331.9
Q ss_pred CCCCCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCC
Q 012587 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHP 80 (460)
Q Consensus 1 ~~~~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (460)
|+++ ..||+++|+|++||++|++.||+.|+.+|+.|||++++.+...+.... .++++|..+|++++++..
T Consensus 1 ~~~~-~~hvv~~P~paqGHi~P~l~lAk~La~~G~~vT~v~t~~~~~~~~~~~---------~~~i~~~~ipdglp~~~~ 70 (449)
T PLN02173 1 MEKM-RGHVLAVPFPSQGHITPIRQFCKRLHSKGFKTTHTLTTFIFNTIHLDP---------SSPISIATISDGYDQGGF 70 (449)
T ss_pred CCCC-CcEEEEecCcccccHHHHHHHHHHHHcCCCEEEEEECCchhhhcccCC---------CCCEEEEEcCCCCCCccc
Confidence 5664 369999999999999999999999999999999999987766553221 235999999988886322
Q ss_pred CCCCChHHHHHHHHhhCcHHHHHHHHcC--CCCc-cEEEEcCCcchHHHHHHHhCCceEEEecchhHHHHHHhhcccccc
Q 012587 81 RTPDKFPELVDSLNCATPPLLKEMVSDS--KSPV-NCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIID 157 (460)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~p-D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~ 157 (460)
+...++..++..+...+.+.++++++.+ ..+| ++||+|.+..|+..+|+++|||++.++++++.....+.+ .....
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~Pv~cvV~D~f~~Wa~dVA~elgIP~v~F~~~~a~~~~~~~~-~~~~~ 149 (449)
T PLN02173 71 SSAGSVPEYLQNFKTFGSKTVADIIRKHQSTDNPITCIVYDSFMPWALDLAREFGLAAAPFFTQSCAVNYINYL-SYINN 149 (449)
T ss_pred ccccCHHHHHHHHHHhhhHHHHHHHHHhhccCCCceEEEECCcchhHHHHHHHhCCCEEEEechHHHHHHHHHh-HHhcc
Confidence 2233455666666666788888888875 2245 999999999999999999999999999987776544332 11100
Q ss_pred -CC--CCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCCCceeEeCcccc
Q 012587 158 -AG--ELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPNIYSIGPLNA 234 (460)
Q Consensus 158 -~~--~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~~~~~~vG~~~~ 234 (460)
.. ..|....++..+++.++............+.+......+++.+++|||++||+..++.++. . ++++.|||+..
T Consensus 150 ~~~~~~~pg~p~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~-~-~~v~~VGPl~~ 227 (449)
T PLN02173 150 GSLTLPIKDLPLLELQDLPTFVTPTGSHLAYFEMVLQQFTNFDKADFVLVNSFHDLDLHENELLSK-V-CPVLTIGPTVP 227 (449)
T ss_pred CCccCCCCCCCCCChhhCChhhcCCCCchHHHHHHHHHHhhhccCCEEEEeCHHHhhHHHHHHHHh-c-CCeeEEcccCc
Confidence 00 0121112456677665532222333444455555666788999999999999999988875 4 47999999974
Q ss_pred ccc--cCCCccccCCCCcc--ccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEccCCCCC
Q 012587 235 HLK--VRIPEKTYSSSSLW--KIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISG 310 (460)
Q Consensus 235 ~~~--~~~~~~~~~~~~~~--~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~ 310 (460)
... ..........++.| +.++++.+||+.++++++|||||||....+.+++..++.++ .+.+|+|+++.+.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~~WLd~~~~~svvyvsfGS~~~~~~~~~~ela~gL--s~~~flWvvr~~~--- 302 (449)
T PLN02173 228 SMYLDQQIKSDNDYDLNLFDLKEAALCTDWLDKRPQGSVVYIAFGSMAKLSSEQMEEIASAI--SNFSYLWVVRASE--- 302 (449)
T ss_pred hhhccccccccccccccccccccchHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHh--cCCCEEEEEeccc---
Confidence 311 00000000001222 23456889999888899999999999999999999999999 6778999997421
Q ss_pred CCCCCCCchHHHHHh-cCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHHHHHhhhc
Q 012587 311 KDGENQIPEELLEAT-KERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWK 389 (460)
Q Consensus 311 ~~~~~~~~~~~~~~~-~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G 389 (460)
...+|+++.++. ++|+++++|+||.+||+|+++++||||||+||++||+++|||||++|.++||+.||+++++.+|
T Consensus 303 ---~~~lp~~~~~~~~~~~~~i~~W~PQ~~iL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g 379 (449)
T PLN02173 303 ---ESKLPPGFLETVDKDKSLVLKWSPQLQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWK 379 (449)
T ss_pred ---hhcccchHHHhhcCCceEEeCCCCHHHHhCCCccceEEecCccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhC
Confidence 124778887776 6889999999999999999999999999999999999999999999999999999999986679
Q ss_pred eeeeec-C----CcchHHHHHHHHHHHh-HhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHH
Q 012587 390 LGLDIK-D----LCDRNIVEKAVNDLMV-ERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIK 451 (460)
Q Consensus 390 ~g~~~~-~----~~~~~~l~~~i~~~l~-~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~ 451 (460)
+|+.+. . ..+.++|+++|+++|. +++.++|+||++++++.++++.+||++.+++++|++.+.
T Consensus 380 ~Gv~v~~~~~~~~~~~e~v~~av~~vm~~~~~~~~r~~a~~~~~~a~~Av~~gGSS~~~l~~~v~~~~ 447 (449)
T PLN02173 380 VGVRVKAEKESGIAKREEIEFSIKEVMEGEKSKEMKENAGKWRDLAVKSLSEGGSTDININTFVSKIQ 447 (449)
T ss_pred ceEEEeecccCCcccHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHhc
Confidence 998885 2 2589999999999997 456789999999999999999999999999999999874
|
|
| >PLN02207 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-60 Score=465.16 Aligned_cols=433 Identities=25% Similarity=0.455 Sum_probs=323.4
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCC--CeEEEEeCccchh-HHhhccccccccccCCCCceEEecCCCCCCCCC
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAG--IKITFLNTEHYYD-RVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHP 80 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~rG--H~Vt~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (460)
|+..||+++|+|++||++|++.||+.|+.+| ..|||++++.+.. .+.......... .++++|..+|++......
T Consensus 1 ~~~~hvv~~P~p~qGHi~P~l~lA~~La~~gg~~~vT~~~t~~~~~~~~~~~~~~~~~~---~~~i~~~~lp~~~~~~~~ 77 (468)
T PLN02207 1 MRNAELIFIPTPTVGHLVPFLEFARRLIEQDDRIRITILLMKLQGQSHLDTYVKSIASS---QPFVRFIDVPELEEKPTL 77 (468)
T ss_pred CCCcEEEEeCCcchhhHHHHHHHHHHHHhCCCCeEEEEEEcCCCcchhhHHhhhhccCC---CCCeEEEEeCCCCCCCcc
Confidence 3456999999999999999999999999998 9999999977652 221111000000 235899999864321110
Q ss_pred CCCCChHHHHHHHHhhC----cHHHHHHHHcC--CCCc-cEEEEcCCcchHHHHHHHhCCceEEEecchhHHHHHHhhcc
Q 012587 81 RTPDKFPELVDSLNCAT----PPLLKEMVSDS--KSPV-NCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIP 153 (460)
Q Consensus 81 ~~~~~~~~~~~~~~~~~----~~~l~~~~~~~--~~~p-D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~ 153 (460)
....+....+......+ .+.+.+++++. +.+| ++||+|.++.|+..+|+++|||++.++++++.......+++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pv~cvV~D~~~~w~~~vA~~~gip~~~f~~~~a~~~~~~~~~~ 157 (468)
T PLN02207 78 GGTQSVEAYVYDVIEKNIPLVRNIVMDILSSLALDGVKVKGFVADFFCLPMIDVAKDVSLPFYVFLTTNSGFLAMMQYLA 157 (468)
T ss_pred ccccCHHHHHHHHHHhcchhHHHHHHHHHHHhccCCCCeEEEEECCcchHHHHHHHHhCCCEEEEECccHHHHHHHHHhh
Confidence 11233444443344344 33455555543 1234 89999999999999999999999999999988777665553
Q ss_pred cccc-CC-----------CCCCC-CCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhh
Q 012587 154 DIID-AG-----------ELPIK-GFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRN 220 (460)
Q Consensus 154 ~~~~-~~-----------~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~ 220 (460)
.... .. .+|.. .-++..+++.++.... . ...+.+......+++.+++|++++||++.++.++.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~vPgl~~~l~~~dlp~~~~~~~---~-~~~~~~~~~~~~~~~~vlvNtf~~LE~~~~~~~~~ 233 (468)
T PLN02207 158 DRHSKDTSVFVRNSEEMLSIPGFVNPVPANVLPSALFVED---G-YDAYVKLAILFTKANGILVNSSFDIEPYSVNHFLD 233 (468)
T ss_pred hccccccccCcCCCCCeEECCCCCCCCChHHCcchhcCCc---c-HHHHHHHHHhcccCCEEEEEchHHHhHHHHHHHHh
Confidence 2211 00 01110 1144455554332111 1 23333444456778999999999999999888843
Q ss_pred -cCCCceeEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcE
Q 012587 221 -HSCPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSF 299 (460)
Q Consensus 221 -~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~ 299 (460)
...|+++.|||+........++ ...+ .++++.+||+.++++++|||||||....+.+++++++.+++.++++|
T Consensus 234 ~~~~p~v~~VGPl~~~~~~~~~~-----~~~~-~~~~~~~WLd~~~~~sVVyvSfGS~~~~~~~q~~ela~~l~~~~~~f 307 (468)
T PLN02207 234 EQNYPSVYAVGPIFDLKAQPHPE-----QDLA-RRDELMKWLDDQPEASVVFLCFGSMGRLRGPLVKEIAHGLELCQYRF 307 (468)
T ss_pred ccCCCcEEEecCCcccccCCCCc-----cccc-hhhHHHHHHhcCCCCcEEEEEeccCcCCCHHHHHHHHHHHHHCCCcE
Confidence 0458899999997643211110 0111 23579999998888899999999999999999999999999999999
Q ss_pred EEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceecccccccchh
Q 012587 300 LWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQI 379 (460)
Q Consensus 300 i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~ 379 (460)
||+++.+... ..+.+|+++.++.++|+.+++|+||.+||+|+++++||||||+||++||+++|||||++|+++||+.
T Consensus 308 lW~~r~~~~~---~~~~lp~~f~er~~~~g~i~~W~PQ~~IL~H~~vg~FvTH~GwnS~~Eai~~GVP~l~~P~~~DQ~~ 384 (468)
T PLN02207 308 LWSLRTEEVT---NDDLLPEGFLDRVSGRGMICGWSPQVEILAHKAVGGFVSHCGWNSIVESLWFGVPIVTWPMYAEQQL 384 (468)
T ss_pred EEEEeCCCcc---ccccCCHHHHhhcCCCeEEEEeCCHHHHhcccccceeeecCccccHHHHHHcCCCEEecCccccchh
Confidence 9999743210 1225788999989999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHhhhceeeeec--------CCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHH
Q 012587 380 NSRFVGEVWKLGLDIK--------DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIK 451 (460)
Q Consensus 380 na~~~~e~~G~g~~~~--------~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~ 451 (460)
||+++++.+|+|+.+. +..+.++|+++|+++|.+++++||+||+++++.+++++.+||+|.+++++||+++.
T Consensus 385 Na~~~~~~~gvGv~~~~~~~~~~~~~v~~e~i~~av~~vm~~~~~~~r~~a~~l~~~a~~A~~~GGSS~~~l~~~v~~~~ 464 (468)
T PLN02207 385 NAFLMVKELKLAVELKLDYRVHSDEIVNANEIETAIRCVMNKDNNVVRKRVMDISQMIQRATKNGGSSFAAIEKFIHDVI 464 (468)
T ss_pred hHHHHHHHhCceEEEecccccccCCcccHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence 9998876689999762 23599999999999997444899999999999999999999999999999999987
Q ss_pred h
Q 012587 452 M 452 (460)
Q Consensus 452 ~ 452 (460)
.
T Consensus 465 ~ 465 (468)
T PLN02207 465 G 465 (468)
T ss_pred h
Confidence 5
|
|
| >PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-60 Score=467.96 Aligned_cols=441 Identities=25% Similarity=0.393 Sum_probs=328.7
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCC----CCCCCC
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTD----GLPRDH 79 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 79 (460)
....||+++|+|++||++|++.||+.|+.+|+.|||++++.+...+...... .+++++..+|. +++++.
T Consensus 7 ~~~~HVvl~PfpaqGHi~P~l~LAk~La~~G~~VTfv~T~~n~~~~~~~~~~-------~~~i~~~~lp~P~~~~lPdG~ 79 (477)
T PLN02863 7 PAGTHVLVFPFPAQGHMIPLLDLTHRLALRGLTITVLVTPKNLPFLNPLLSK-------HPSIETLVLPFPSHPSIPSGV 79 (477)
T ss_pred CCCCEEEEecCcccchHHHHHHHHHHHHhCCCEEEEEeCCCcHHHHhhhccc-------CCCeeEEeCCCCCcCCCCCCC
Confidence 3457999999999999999999999999999999999999888776543210 22466655431 344332
Q ss_pred CCC---CCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEEEecchhHHHHHHhhccccc
Q 012587 80 PRT---PDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDII 156 (460)
Q Consensus 80 ~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 156 (460)
... ..+....+......+.+.+.+++++...+|++||+|.+..|+..+|+++|||++.++++++.....+.+++...
T Consensus 80 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~p~cvI~D~f~~Wa~dVA~e~GIP~~~F~t~sA~~~~~~~~~~~~~ 159 (477)
T PLN02863 80 ENVKDLPPSGFPLMIHALGELYAPLLSWFRSHPSPPVAIISDMFLGWTQNLACQLGIRRFVFSPSGAMALSIMYSLWREM 159 (477)
T ss_pred cChhhcchhhHHHHHHHHHHhHHHHHHHHHhCCCCCeEEEEcCchHhHHHHHHHcCCCEEEEeccCHHHHHHHHHHhhcc
Confidence 211 11112223333334566677777764336799999999999999999999999999999999888776654211
Q ss_pred cCC-------------CCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCC
Q 012587 157 DAG-------------ELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSC 223 (460)
Q Consensus 157 ~~~-------------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~ 223 (460)
+.. .+|....++..+++.++......+.....+.+.......++.+++|+|++||+..++.++. .+
T Consensus 160 ~~~~~~~~~~~~~~~~~iPg~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~-~~ 238 (477)
T PLN02863 160 PTKINPDDQNEILSFSKIPNCPKYPWWQISSLYRSYVEGDPAWEFIKDSFRANIASWGLVVNSFTELEGIYLEHLKK-EL 238 (477)
T ss_pred cccccccccccccccCCCCCCCCcChHhCchhhhccCccchHHHHHHHHHhhhccCCEEEEecHHHHHHHHHHHHHh-hc
Confidence 100 0121113555566554432222233444444444445667889999999999999999987 54
Q ss_pred --CceeEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEE
Q 012587 224 --PNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLW 301 (460)
Q Consensus 224 --~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~ 301 (460)
++++.|||+....... .......++.+..++++.+||+.++++++|||||||....+.++++.++.+++..+.+|||
T Consensus 239 ~~~~v~~IGPL~~~~~~~-~~~~~~~~~~~~~~~~~~~WLd~~~~~svVyvsfGS~~~~~~~~~~ela~gL~~~~~~flw 317 (477)
T PLN02863 239 GHDRVWAVGPILPLSGEK-SGLMERGGPSSVSVDDVMTWLDTCEDHKVVYVCFGSQVVLTKEQMEALASGLEKSGVHFIW 317 (477)
T ss_pred CCCCeEEeCCCccccccc-ccccccCCcccccHHHHHHHHhcCCCCceEEEEeeceecCCHHHHHHHHHHHHhCCCcEEE
Confidence 6899999997532100 0000000011112457999999888899999999999999999999999999999999999
Q ss_pred EEccCCCCCCCCCCCCchHHHHHh-cCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceecccccccchhh
Q 012587 302 VIRPDLISGKDGENQIPEELLEAT-KERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQIN 380 (460)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~-~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~n 380 (460)
+++.+.... .....+|+++.++. +.++++.+|+||.+||+|+++++||||||+||++||+++|||||++|+++||+.|
T Consensus 318 ~~~~~~~~~-~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~n 396 (477)
T PLN02863 318 CVKEPVNEE-SDYSNIPSGFEDRVAGRGLVIRGWAPQVAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWPMAADQFVN 396 (477)
T ss_pred EECCCcccc-cchhhCCHHHHHHhccCCEEecCCCCHHHHhcCCCcCeEEecCCchHHHHHHHcCCCEEeCCccccchhh
Confidence 997431110 01124788887665 3466677999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhceeeeec----CCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHhhcC
Q 012587 381 SRFVGEVWKLGLDIK----DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKMMSS 455 (460)
Q Consensus 381 a~~~~e~~G~g~~~~----~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~ 455 (460)
|+++++++|+|+.+. ...+.+++.+++++++. ++++||+||+++++.+++++.+||++.+++++||+.+...+.
T Consensus 397 a~~v~~~~gvG~~~~~~~~~~~~~~~v~~~v~~~m~-~~~~~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~i~~~~~ 474 (477)
T PLN02863 397 ASLLVDELKVAVRVCEGADTVPDSDELARVFMESVS-ENQVERERAKELRRAALDAIKERGSSVKDLDGFVKHVVELGL 474 (477)
T ss_pred HHHHHHhhceeEEeccCCCCCcCHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHhcc
Confidence 999877789999994 23589999999999994 238999999999999999999999999999999999987754
|
|
| >PLN02210 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-60 Score=466.00 Aligned_cols=425 Identities=29% Similarity=0.483 Sum_probs=321.8
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHH--HHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCC
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAEL--LGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRT 82 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~--L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (460)
+..||+++|+|++||++|++.||+. |++||+.|||++++.+.+.+. ..+.. ...+++..++++++++..
T Consensus 7 ~~~hvv~~P~pa~GHi~P~l~La~~L~L~~~G~~VT~v~t~~~~~~~~-~~~~~------~~~~~~~~~~~glp~~~~-- 77 (456)
T PLN02210 7 QETHVLMVTLAFQGHINPMLKLAKHLSLSSKNLHFTLATTEQARDLLS-TVEKP------RRPVDLVFFSDGLPKDDP-- 77 (456)
T ss_pred CCCEEEEeCCcccccHHHHHHHHHHHHhhcCCcEEEEEeccchhhhhc-cccCC------CCceEEEECCCCCCCCcc--
Confidence 4469999999999999999999999 569999999999988776653 22211 224778777777776531
Q ss_pred CCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEEEecchhHHHHHHhhcccc---ccC-
Q 012587 83 PDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDI---IDA- 158 (460)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~---~~~- 158 (460)
.+...++..+...+.+.++++++.. +||+||+|.++.|+..+|+++|||.+.+++.++.......+++.. .+.
T Consensus 78 -~~~~~~~~~~~~~~~~~l~~~l~~~--~~~~vI~D~~~~w~~~vA~~lgIP~~~f~~~sa~~~~~~~~~~~~~~~~~~~ 154 (456)
T PLN02210 78 -RAPETLLKSLNKVGAKNLSKIIEEK--RYSCIISSPFTPWVPAVAAAHNIPCAILWIQACGAYSVYYRYYMKTNSFPDL 154 (456)
T ss_pred -cCHHHHHHHHHHhhhHHHHHHHhcC--CCcEEEECCcchhHHHHHHHhCCCEEEEecccHHHHHHHHhhhhccCCCCcc
Confidence 3444566666655677788888876 899999999999999999999999999998888776665544211 000
Q ss_pred ----C--CCCCCCCccCCCCCCcccCCCCCChHHHHHH-HHhhhhcCCCEEEEcChhhhchhHHHHHhhcCCCceeEeCc
Q 012587 159 ----G--ELPIKGFLRCRDLPSFCRVNDPMDPHLLLFA-RETRLSAHADGLILNTFEDLEGPILSQIRNHSCPNIYSIGP 231 (460)
Q Consensus 159 ----~--~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~~~~~~vG~ 231 (460)
. ..|...-++..+++..+.. .......... +.......++.+++|++++||+..++.++. . +++++|||
T Consensus 155 ~~~~~~~~~Pgl~~~~~~dl~~~~~~--~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~-~-~~v~~VGP 230 (456)
T PLN02210 155 EDLNQTVELPALPLLEVRDLPSFMLP--SGGAHFNNLMAEFADCLRYVKWVLVNSFYELESEIIESMAD-L-KPVIPIGP 230 (456)
T ss_pred cccCCeeeCCCCCCCChhhCChhhhc--CCchHHHHHHHHHHHhcccCCEEEEeCHHHHhHHHHHHHhh-c-CCEEEEcc
Confidence 0 0111001334444433321 1111122222 222334567899999999999999998875 4 67999999
Q ss_pred cccccc--cCCCc-cccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEccCCC
Q 012587 232 LNAHLK--VRIPE-KTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLI 308 (460)
Q Consensus 232 ~~~~~~--~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~ 308 (460)
+..... ....+ .......+|..++++.+|++.++++++|||||||....+.+++++++.+++..+.+|||+++.+..
T Consensus 231 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~e~a~~l~~~~~~flw~~~~~~~ 310 (456)
T PLN02210 231 LVSPFLLGDDEEETLDGKNLDMCKSDDCCMEWLDKQARSSVVYISFGSMLESLENQVETIAKALKNRGVPFLWVIRPKEK 310 (456)
T ss_pred cCchhhcCcccccccccccccccccchHHHHHHhCCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEeCCcc
Confidence 974211 00000 000001234556778999998888999999999999889999999999999999999999964211
Q ss_pred CCCCCCCCCchHHHHHh-cCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHHHHHhh
Q 012587 309 SGKDGENQIPEELLEAT-KERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEV 387 (460)
Q Consensus 309 ~~~~~~~~~~~~~~~~~-~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~ 387 (460)
...+..+.++. +++.++++|+||.+||+|+++++||||||+||++||+++|||||++|+++||+.||++++++
T Consensus 311 ------~~~~~~~~~~~~~~~g~v~~w~PQ~~iL~h~~vg~FitH~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~ 384 (456)
T PLN02210 311 ------AQNVQVLQEMVKEGQGVVLEWSPQEKILSHMAISCFVTHCGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDV 384 (456)
T ss_pred ------ccchhhHHhhccCCCeEEEecCCHHHHhcCcCcCeEEeeCCcccHHHHHHcCCCEEecccccccHHHHHHHHHH
Confidence 01234454554 47778889999999999999999999999999999999999999999999999999999755
Q ss_pred hceeeeec-----CCcchHHHHHHHHHHHhH-hHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHH
Q 012587 388 WKLGLDIK-----DLCDRNIVEKAVNDLMVE-RKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIK 451 (460)
Q Consensus 388 ~G~g~~~~-----~~~~~~~l~~~i~~~l~~-~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~ 451 (460)
+|+|+.+. +.++.++|+++|+++|.+ +|.++|+||+++++.+++++++||+|.+++++||+.+.
T Consensus 385 ~g~G~~l~~~~~~~~~~~~~l~~av~~~m~~~~g~~~r~~a~~l~~~a~~Av~~gGSS~~~l~~~v~~~~ 454 (456)
T PLN02210 385 FGIGVRMRNDAVDGELKVEEVERCIEAVTEGPAAADIRRRAAELKHVARLALAPGGSSARNLDLFISDIT 454 (456)
T ss_pred hCeEEEEeccccCCcCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHh
Confidence 89999985 258999999999999974 46679999999999999999999999999999999875
|
|
| >PLN02152 indole-3-acetate beta-glucosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-60 Score=461.77 Aligned_cols=434 Identities=29% Similarity=0.481 Sum_probs=327.3
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHh-CCCeEEEEeCccc-hhHHhhccccccccccCCCCceEEecCCCCCCCCCCCC
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGH-AGIKITFLNTEHY-YDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTP 83 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~-rGH~Vt~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (460)
..||+++|+|++||++|++.||+.|+. +|+.|||++++.+ ...+..... . .++++|..++++++++.....
T Consensus 3 ~~hvv~~P~p~qGHi~P~l~La~~La~~~G~~vT~v~t~~~~~~~~~~~~~----~---~~~i~~~~i~dglp~g~~~~~ 75 (455)
T PLN02152 3 PPHFLLVTFPAQGHVNPSLRFARRLIKTTGTRVTFATCLSVIHRSMIPNHN----N---VENLSFLTFSDGFDDGVISNT 75 (455)
T ss_pred CcEEEEecCcccccHHHHHHHHHHHhhCCCcEEEEEeccchhhhhhhccCC----C---CCCEEEEEcCCCCCCcccccc
Confidence 359999999999999999999999996 7999999999754 222221100 0 235899999988876532223
Q ss_pred CChHHHHHHHHhhCcHHHHHHHHcC--C-CCccEEEEcCCcchHHHHHHHhCCceEEEecchhHHHHHHhhccccccC-C
Q 012587 84 DKFPELVDSLNCATPPLLKEMVSDS--K-SPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDA-G 159 (460)
Q Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~~~--~-~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~-~ 159 (460)
.+....+..+...+.+.+.++++.+ . .++++||+|.+..|+..+|+++|||++.++++++.....+.+++..... .
T Consensus 76 ~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~pv~ciV~D~~~~wa~dvA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~~ 155 (455)
T PLN02152 76 DDVQNRLVNFERNGDKALSDFIEANLNGDSPVTCLIYTILPNWAPKVARRFHLPSVLLWIQPAFVFDIYYNYSTGNNSVF 155 (455)
T ss_pred ccHHHHHHHHHHhccHHHHHHHHHhhccCCCceEEEECCccHhHHHHHHHhCCCEEEEECccHHHHHHHHHhhccCCCee
Confidence 3455566666666888888888875 1 2459999999999999999999999999999999887776655321111 0
Q ss_pred CCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhc--CCCEEEEcChhhhchhHHHHHhhcCCCceeEeCccccccc
Q 012587 160 ELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSA--HADGLILNTFEDLEGPILSQIRNHSCPNIYSIGPLNAHLK 237 (460)
Q Consensus 160 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~le~p~~~~~~~~~~~~~~~vG~~~~~~~ 237 (460)
..|....++..+++.++............+.+...... .++.+++|||++||+..++.++. .+++.|||+.....
T Consensus 156 ~iPglp~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~---~~v~~VGPL~~~~~ 232 (455)
T PLN02152 156 EFPNLPSLEIRDLPSFLSPSNTNKAAQAVYQELMEFLKEESNPKILVNTFDSLEPEFLTAIPN---IEMVAVGPLLPAEI 232 (455)
T ss_pred ecCCCCCCchHHCchhhcCCCCchhHHHHHHHHHHHhhhccCCEEEEeChHHhhHHHHHhhhc---CCEEEEcccCcccc
Confidence 12221125566777655432222222333333333222 24689999999999999988864 26999999975321
Q ss_pred cCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEccCCCC-C---CCC
Q 012587 238 VRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLIS-G---KDG 313 (460)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~-~---~~~ 313 (460)
.. .........+++.+.++.+|||.++.++||||||||....+.+++++++.+|+.++.+|||+++.+... . ...
T Consensus 233 ~~-~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flWv~r~~~~~~~~~~~~~ 311 (455)
T PLN02152 233 FT-GSESGKDLSVRDQSSSYTLWLDSKTESSVIYVSFGTMVELSKKQIEELARALIEGKRPFLWVITDKLNREAKIEGEE 311 (455)
T ss_pred cc-ccccCccccccccchHHHHHhhCCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCeEEEEecCccccccccccc
Confidence 00 000000001123345799999988888999999999999999999999999999999999999753110 0 000
Q ss_pred C--CCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHHHHHhhhcee
Q 012587 314 E--NQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLG 391 (460)
Q Consensus 314 ~--~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g 391 (460)
. ..+++++.++.++|+++.+|+||.+||+|+++++||||||+||++||+++|||||++|+++||+.||+++++.+|+|
T Consensus 312 ~~~~~~~~~f~e~~~~~g~v~~W~PQ~~iL~h~~vg~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G 391 (455)
T PLN02152 312 ETEIEKIAGFRHELEEVGMIVSWCSQIEVLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTG 391 (455)
T ss_pred ccccccchhHHHhccCCeEEEeeCCHHHHhCCcccceEEeeCCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCce
Confidence 0 12467888888899999999999999999999999999999999999999999999999999999999997655777
Q ss_pred eeec---C-CcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Q 012587 392 LDIK---D-LCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDI 450 (460)
Q Consensus 392 ~~~~---~-~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l 450 (460)
+.+. . ..+.++|+++|+++|++++.+||+||+++++.+++++.+||+|.+++++||+++
T Consensus 392 ~~~~~~~~~~~~~e~l~~av~~vm~~~~~~~r~~a~~~~~~~~~a~~~ggsS~~nl~~li~~i 454 (455)
T PLN02152 392 VRVRENSEGLVERGEIRRCLEAVMEEKSVELRESAEKWKRLAIEAGGEGGSSDKNVEAFVKTL 454 (455)
T ss_pred EEeecCcCCcCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHh
Confidence 6663 2 469999999999999875567999999999999999999999999999999976
|
|
| >PLN02448 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-59 Score=464.70 Aligned_cols=423 Identities=30% Similarity=0.524 Sum_probs=325.0
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhC--CCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCC
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHA--GIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPR 81 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (460)
+...||+++|+|++||++|++.||+.|++| ||+|||++++.+...+.+... .++++|..+|++++++..
T Consensus 8 ~~~~hVvlvp~pa~GHi~P~l~LA~~L~~~~~G~~VT~~~t~~~~~~i~~~~~--------~~gi~fv~lp~~~p~~~~- 78 (459)
T PLN02448 8 TTSCHVVAMPYPGRGHINPMMNLCKLLASRKPDILITFVVTEEWLGLIGSDPK--------PDNIRFATIPNVIPSELV- 78 (459)
T ss_pred CCCcEEEEECCcccccHHHHHHHHHHHHcCCCCcEEEEEeCCchHhHhhccCC--------CCCEEEEECCCCCCCccc-
Confidence 566899999999999999999999999999 999999999888777765321 235999999876665432
Q ss_pred CCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEEEecchhHHHHHHhhccccccCCC-
Q 012587 82 TPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGE- 160 (460)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~- 160 (460)
...+...++..+...+.+.++++++.+..++|+||+|.++.|+..+|+++|||++.++++++.....+.+++.....+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~VI~D~~~~wa~~vA~~lgIP~v~f~~~~a~~~~~~~~~~~~~~~~~~ 158 (459)
T PLN02448 79 RAADFPGFLEAVMTKMEAPFEQLLDRLEPPVTAIVADTYLFWAVGVGNRRNIPVASLWTMSATFFSVFYHFDLLPQNGHF 158 (459)
T ss_pred cccCHHHHHHHHHHHhHHHHHHHHHhcCCCcEEEEECCccHHHHHHHHHhCCCeEEEEhHHHHHHHHHHHhhhhhhccCC
Confidence 1234555555555456777888887753367999999999999999999999999999999876665554432111000
Q ss_pred --------------CCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCC-Cc
Q 012587 161 --------------LPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSC-PN 225 (460)
Q Consensus 161 --------------~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~-~~ 225 (460)
.|....++..+++.++.. ........+........+++.+++|++++||+..++.++. .. ++
T Consensus 159 ~~~~~~~~~~~~~~iPg~~~l~~~dlp~~~~~--~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~-~~~~~ 235 (459)
T PLN02448 159 PVELSESGEERVDYIPGLSSTRLSDLPPIFHG--NSRRVLKRILEAFSWVPKAQYLLFTSFYELEAQAIDALKS-KFPFP 235 (459)
T ss_pred CCccccccCCccccCCCCCCCChHHCchhhcC--CchHHHHHHHHHHhhcccCCEEEEccHHHhhHHHHHHHHh-hcCCc
Confidence 111111333344433321 1223344455555555677899999999999998998887 55 58
Q ss_pred eeEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEcc
Q 012587 226 IYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRP 305 (460)
Q Consensus 226 ~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~ 305 (460)
++.|||+........... .. ...+.+.++.+|++.++++++|||||||....+.++++.++.+++..+.+|||++..
T Consensus 236 ~~~iGP~~~~~~~~~~~~--~~-~~~~~~~~~~~wl~~~~~~~vvyvsfGs~~~~~~~~~~~~~~~l~~~~~~~lw~~~~ 312 (459)
T PLN02448 236 VYPIGPSIPYMELKDNSS--SS-NNEDNEPDYFQWLDSQPEGSVLYVSLGSFLSVSSAQMDEIAAGLRDSGVRFLWVARG 312 (459)
T ss_pred eEEecCcccccccCCCcc--cc-ccccchhHHHHHHcCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCEEEEEcC
Confidence 999999975321100000 00 000123478899998888999999999998888999999999999999999998752
Q ss_pred CCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHHHHH
Q 012587 306 DLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVG 385 (460)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~ 385 (460)
+ ..++.++.++|+++++|+||.+||+|+++++||||||+||++||+++|||||++|+++||+.||++++
T Consensus 313 ~-----------~~~~~~~~~~~~~v~~w~pQ~~iL~h~~v~~fvtHgG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~ 381 (459)
T PLN02448 313 E-----------ASRLKEICGDMGLVVPWCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIV 381 (459)
T ss_pred c-----------hhhHhHhccCCEEEeccCCHHHHhccCccceEEecCchhHHHHHHHcCCCEEeccccccchhhHHHHH
Confidence 1 12344444578999999999999999999999999999999999999999999999999999999997
Q ss_pred hhhceeeeec------CCcchHHHHHHHHHHHhH---hHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHh
Q 012587 386 EVWKLGLDIK------DLCDRNIVEKAVNDLMVE---RKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKM 452 (460)
Q Consensus 386 e~~G~g~~~~------~~~~~~~l~~~i~~~l~~---~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~ 452 (460)
+.+|+|+.+. ...++++|+++|+++|.+ ++.+||+||+++++.+++++.+||+|.+++++||+.+..
T Consensus 382 ~~~g~G~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~r~~a~~~~~~~~~a~~~gGss~~~l~~~v~~~~~ 457 (459)
T PLN02448 382 EDWKIGWRVKREVGEETLVGREEIAELVKRFMDLESEEGKEMRRRAKELQEICRGAIAKGGSSDTNLDAFIRDISQ 457 (459)
T ss_pred HHhCceEEEecccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhc
Confidence 5578888884 147999999999999973 467899999999999999999999999999999999874
|
|
| >PLN02670 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-59 Score=456.11 Aligned_cols=435 Identities=27% Similarity=0.453 Sum_probs=324.2
Q ss_pred CCCCCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecC----CCCC
Q 012587 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLT----DGLP 76 (460)
Q Consensus 1 ~~~~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 76 (460)
|.+....||+++|+|++||++|++.||+.|+.||..|||++++.+...+.+.... . .+++++..+| ++++
T Consensus 1 ~~~~~~~HVvl~P~paqGHi~P~l~LAk~La~~G~~vT~v~t~~n~~~~~~~~~~-~-----~~~i~~~~lp~p~~dglp 74 (472)
T PLN02670 1 MKREEVLHVAMFPWLAMGHLIPFLRLSKLLAQKGHKISFISTPRNLHRLPKIPSQ-L-----SSSITLVSFPLPSVPGLP 74 (472)
T ss_pred CCCCCCcEEEEeCChhhhHHHHHHHHHHHHHhCCCEEEEEeCCchHHhhhhcccc-C-----CCCeeEEECCCCccCCCC
Confidence 5666678999999999999999999999999999999999998887666532110 0 1247888887 5666
Q ss_pred CCCCCCCCChH----HHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEEEecchhHHHHHHhhc
Q 012587 77 RDHPRTPDKFP----ELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCI 152 (460)
Q Consensus 77 ~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~ 152 (460)
++... ..+.. .++......+.+.+++++++. ++++||+|.+..|+..+|+++|||++.++++++.....+.++
T Consensus 75 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~cvI~D~f~~wa~~vA~~~gIP~~~f~~~~a~~~~~~~~~ 151 (472)
T PLN02670 75 SSAES-STDVPYTKQQLLKKAFDLLEPPLTTFLETS--KPDWIIYDYASHWLPSIAAELGISKAFFSLFTAATLSFIGPP 151 (472)
T ss_pred CCccc-ccccchhhHHHHHHHHHHhHHHHHHHHHhC--CCcEEEECCcchhHHHHHHHcCCCEEEEehhhHHHHHHHhhh
Confidence 54321 12221 234445555778888888886 899999999999999999999999999999888776664432
Q ss_pred cccccCCC----------C----CCCC--CccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHH
Q 012587 153 PDIIDAGE----------L----PIKG--FLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILS 216 (460)
Q Consensus 153 ~~~~~~~~----------~----p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~ 216 (460)
......+. . |... .++..+++.++............+.+......+++.+++|||++||+..++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~p~~~P~~~~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~gvlvNTf~eLE~~~l~ 231 (472)
T PLN02670 152 SSLMEGGDLRSTAEDFTVVPPWVPFESNIVFRYHEVTKYVEKTEEDETGPSDSVRFGFAIGGSDVVIIRSSPEFEPEWFD 231 (472)
T ss_pred HhhhhcccCCCccccccCCCCcCCCCccccccHHHhhHHHhccCccchHHHHHHHHHhhcccCCEEEEeCHHHHhHHHHH
Confidence 11100000 0 1000 022234443332111111222333334344567889999999999999999
Q ss_pred HHhhcCC-CceeEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhC
Q 012587 217 QIRNHSC-PNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHS 295 (460)
Q Consensus 217 ~~~~~~~-~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~ 295 (460)
.++. .. ++++.|||+........... ..+. +.++++.+|||.+++++||||||||....+.+++.+++.+|+.+
T Consensus 232 ~l~~-~~~~~v~~VGPl~~~~~~~~~~~---~~~~-~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gl~~s 306 (472)
T PLN02670 232 LLSD-LYRKPIIPIGFLPPVIEDDEEDD---TIDV-KGWVRIKEWLDKQRVNSVVYVALGTEASLRREEVTELALGLEKS 306 (472)
T ss_pred HHHH-hhCCCeEEEecCCcccccccccc---cccc-chhHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHHC
Confidence 9987 54 68999999975311100000 0000 11256899999888899999999999999999999999999999
Q ss_pred CCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCcee-eeecChHhhhcccccccccccCChhHHHHHHHhCCceeccccc
Q 012587 296 KKSFLWVIRPDLISGKDGENQIPEELLEATKERGCI-AGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSF 374 (460)
Q Consensus 296 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~-~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~ 374 (460)
+.+|||++.............+|+++.++..++..+ .+|+||.+||+|+++++||||||+||++||+++|||||++|++
T Consensus 307 ~~~FlWv~r~~~~~~~~~~~~lp~~f~~~~~~rG~vv~~W~PQ~~IL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~ 386 (472)
T PLN02670 307 ETPFFWVLRNEPGTTQNALEMLPDGFEERVKGRGMIHVGWVPQVKILSHESVGGFLTHCGWNSVVEGLGFGRVLILFPVL 386 (472)
T ss_pred CCCEEEEEcCCcccccchhhcCChHHHHhccCCCeEEeCcCCHHHHhcCcccceeeecCCcchHHHHHHcCCCEEeCcch
Confidence 999999997531110011125889998887666665 5999999999999999999999999999999999999999999
Q ss_pred ccchhhHHHHHhhhceeeeec-C----CcchHHHHHHHHHHHhH-hHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHH
Q 012587 375 ADQQINSRFVGEVWKLGLDIK-D----LCDRNIVEKAVNDLMVE-RKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVN 448 (460)
Q Consensus 375 ~DQ~~na~~~~e~~G~g~~~~-~----~~~~~~l~~~i~~~l~~-~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 448 (460)
+||+.||++++ ++|+|+.+. . .++.++|+++|+++|.+ +|.+||+||+++++.+++. +....+++.+++
T Consensus 387 ~DQ~~Na~~v~-~~g~Gv~l~~~~~~~~~~~e~i~~av~~vm~~~~g~~~r~~a~~l~~~~~~~----~~~~~~~~~~~~ 461 (472)
T PLN02670 387 NEQGLNTRLLH-GKKLGLEVPRDERDGSFTSDSVAESVRLAMVDDAGEEIRDKAKEMRNLFGDM----DRNNRYVDELVH 461 (472)
T ss_pred hccHHHHHHHH-HcCeeEEeeccccCCcCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHhCc----chhHHHHHHHHH
Confidence 99999999994 789999996 2 38999999999999974 3558999999999999984 666889999999
Q ss_pred HHHhhc
Q 012587 449 DIKMMS 454 (460)
Q Consensus 449 ~l~~~~ 454 (460)
.|..+.
T Consensus 462 ~l~~~~ 467 (472)
T PLN02670 462 YLRENR 467 (472)
T ss_pred HHHHhc
Confidence 998774
|
|
| >PLN00164 glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-58 Score=457.58 Aligned_cols=433 Identities=30% Similarity=0.491 Sum_probs=327.8
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCC----CeEEEEeCccchh----HHhhccccccccccCCCCceEEecCCCCC
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAG----IKITFLNTEHYYD----RVIRHSSDAFSRYMQIPGFQFKTLTDGLP 76 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~rG----H~Vt~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (460)
++.||+++|+|++||++|++.||+.|+.+| +.|||++++.+.. .+.......... ..++.|..+|++.+
T Consensus 2 ~~~HVVlvPfpaqGHi~P~l~LAk~La~~g~~~~~~vT~~~t~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~lp~~~~ 78 (480)
T PLN00164 2 AAPTVVLLPVWGSGHLMSMLEAGKRLLASSGGGALSLTVLVMPPPTPESASEVAAHVRREAAS---GLDIRFHHLPAVEP 78 (480)
T ss_pred CCCEEEEeCCcchhHHHHHHHHHHHHHhCCCCCcEEEEEEEcCCCccchhHHHHHHHhhcccC---CCCEEEEECCCCCC
Confidence 456999999999999999999999999997 7999999866432 232211000000 12488999986543
Q ss_pred CCCCCCCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEEEecchhHHHHHHhhccccc
Q 012587 77 RDHPRTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDII 156 (460)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 156 (460)
+.. ..+...++..+...+.+.+++++..+..++++||+|.++.|+..+|+++|||++.++++++.....+.+++...
T Consensus 79 p~~---~e~~~~~~~~~~~~~~~~l~~~L~~l~~pv~cIV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~ 155 (480)
T PLN00164 79 PTD---AAGVEEFISRYIQLHAPHVRAAIAGLSCPVAALVVDFFCTPLLDVARELAVPAYVYFTSTAAMLALMLRLPALD 155 (480)
T ss_pred CCc---cccHHHHHHHHHHhhhHHHHHHHHhcCCCceEEEECCcchhHHHHHHHhCCCEEEEECccHHHHHHHhhhhhhc
Confidence 211 12334455555556778888888875224699999999999999999999999999999998887776654321
Q ss_pred cC------C-----CCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcC---
Q 012587 157 DA------G-----ELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHS--- 222 (460)
Q Consensus 157 ~~------~-----~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~--- 222 (460)
.. . .+|....++..+++..+.. ........+........+++.+++|||++||+..++.++. .
T Consensus 156 ~~~~~~~~~~~~~~~iPGlp~l~~~dlp~~~~~--~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~-~~~~ 232 (480)
T PLN00164 156 EEVAVEFEEMEGAVDVPGLPPVPASSLPAPVMD--KKSPNYAWFVYHGRRFMEAAGIIVNTAAELEPGVLAAIAD-GRCT 232 (480)
T ss_pred ccccCcccccCcceecCCCCCCChHHCCchhcC--CCcHHHHHHHHHHHhhhhcCEEEEechHHhhHHHHHHHHh-cccc
Confidence 11 0 0111111445555543322 1112233333344555778899999999999999998876 3
Q ss_pred ----CCceeEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCCCc
Q 012587 223 ----CPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKS 298 (460)
Q Consensus 223 ----~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~ 298 (460)
.++++.|||+....... .....++++.+||+.++.+++|||||||....+.+++++++.+|+..+.+
T Consensus 233 ~~~~~~~v~~vGPl~~~~~~~---------~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~q~~ela~gL~~s~~~ 303 (480)
T PLN00164 233 PGRPAPTVYPIGPVISLAFTP---------PAEQPPHECVRWLDAQPPASVVFLCFGSMGFFDAPQVREIAAGLERSGHR 303 (480)
T ss_pred ccCCCCceEEeCCCccccccC---------CCccchHHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCC
Confidence 26899999997432110 11124567999999988899999999999888999999999999999999
Q ss_pred EEEEEccCCCCC------CCCCCCCchHHHHHhcCCceee-eecChHhhhcccccccccccCChhHHHHHHHhCCceecc
Q 012587 299 FLWVIRPDLISG------KDGENQIPEELLEATKERGCIA-GWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICW 371 (460)
Q Consensus 299 ~i~~~~~~~~~~------~~~~~~~~~~~~~~~~~n~~~~-~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~ 371 (460)
|||+++.....+ .+....+|+++.++..+...++ +|+||.+||+|+++++||||||+||++||+++|||||++
T Consensus 304 flWv~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~PQ~~iL~h~~vg~fvtH~GwnS~~Eai~~GVP~l~~ 383 (480)
T PLN00164 304 FLWVLRGPPAAGSRHPTDADLDELLPEGFLERTKGRGLVWPTWAPQKEILAHAAVGGFVTHCGWNSVLESLWHGVPMAPW 383 (480)
T ss_pred EEEEEcCCcccccccccccchhhhCChHHHHHhcCCCeEEeecCCHHHHhcCcccCeEEeecccchHHHHHHcCCCEEeC
Confidence 999998532110 0111247888887766665555 999999999999999999999999999999999999999
Q ss_pred cccccchhhHHHHHhhhceeeeec-C-----CcchHHHHHHHHHHHhH---hHHHHHHHHHHHHHHHHHHhhcCCChHHH
Q 012587 372 PSFADQQINSRFVGEVWKLGLDIK-D-----LCDRNIVEKAVNDLMVE---RKEEFMESADRMANLAKKSVNKGGSSYCN 442 (460)
Q Consensus 372 P~~~DQ~~na~~~~e~~G~g~~~~-~-----~~~~~~l~~~i~~~l~~---~~~~~~~~a~~l~~~~~~~~~~~g~~~~~ 442 (460)
|+++||+.||+++++++|+|+.+. . ..+.++|.++|+++|.+ ++..+|++|+++++.+++++.+||++.++
T Consensus 384 P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~~~~~~r~~a~~~~~~~~~a~~~gGSS~~~ 463 (480)
T PLN00164 384 PLYAEQHLNAFELVADMGVAVAMKVDRKRDNFVEAAELERAVRSLMGGGEEEGRKAREKAAEMKAACRKAVEEGGSSYAA 463 (480)
T ss_pred CccccchhHHHHHHHHhCeEEEeccccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHH
Confidence 999999999998866789999985 2 26899999999999974 47889999999999999999999999999
Q ss_pred HHHHHHHHHhhcC
Q 012587 443 LDRLVNDIKMMSS 455 (460)
Q Consensus 443 ~~~~~~~l~~~~~ 455 (460)
+++|++++....-
T Consensus 464 l~~~v~~~~~~~~ 476 (480)
T PLN00164 464 LQRLAREIRHGAV 476 (480)
T ss_pred HHHHHHHHHhccC
Confidence 9999999987654
|
|
| >PLN02992 coniferyl-alcohol glucosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-58 Score=453.06 Aligned_cols=420 Identities=30% Similarity=0.517 Sum_probs=319.3
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHH-hCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCC----CCCCCCCC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLG-HAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTD----GLPRDHPR 81 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~-~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 81 (460)
.||+++|+|++||++|++.||+.|+ ++|+.|||++++.+...+...... .+++++..+|. ++++..
T Consensus 6 pHVvl~P~paqGHi~P~l~LAk~La~~~g~~vT~v~t~~n~~~~~~~~~~-------~~~i~~~~lp~p~~~glp~~~-- 76 (481)
T PLN02992 6 PHAAMFSSPGMGHVIPVIELGKRLSANHGFHVTVFVLETDAASAQSKFLN-------STGVDIVGLPSPDISGLVDPS-- 76 (481)
T ss_pred cEEEEeCCcccchHHHHHHHHHHHHhCCCcEEEEEeCCCchhhhhhcccc-------CCCceEEECCCccccCCCCCC--
Confidence 5999999999999999999999998 789999999998876555332110 12477888874 333111
Q ss_pred CCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEEEecchhHHHHHHhhccccccC-C-
Q 012587 82 TPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDA-G- 159 (460)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~-~- 159 (460)
......+......+.+.++++++++..+|++||+|.++.|+..+|+++|||++.++++++.....+.+++..... .
T Consensus 77 --~~~~~~~~~~~~~~~~~~~~~l~~~~~~p~cvV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~~~~~~ 154 (481)
T PLN02992 77 --AHVVTKIGVIMREAVPTLRSKIAEMHQKPTALIVDLFGTDALCLGGEFNMLTYIFIASNARFLGVSIYYPTLDKDIKE 154 (481)
T ss_pred --ccHHHHHHHHHHHhHHHHHHHHHhcCCCCeEEEECCcchhHHHHHHHcCCCEEEEecCcHHHHHHHHhhhhhcccccc
Confidence 122223333333466788888877534789999999999999999999999999999998877655544321100 0
Q ss_pred ---------CCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcC-------C
Q 012587 160 ---------ELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHS-------C 223 (460)
Q Consensus 160 ---------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~-------~ 223 (460)
.+|....++..+++..+.. ........+.+......+++.+++|||++||+..++.++. . .
T Consensus 155 ~~~~~~~~~~iPg~~~l~~~dlp~~~~~--~~~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~l~~l~~-~~~~~~~~~ 231 (481)
T PLN02992 155 EHTVQRKPLAMPGCEPVRFEDTLDAYLV--PDEPVYRDFVRHGLAYPKADGILVNTWEEMEPKSLKSLQD-PKLLGRVAR 231 (481)
T ss_pred ccccCCCCcccCCCCccCHHHhhHhhcC--CCcHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHhh-ccccccccC
Confidence 0111112334444432211 1122334444455556778899999999999999998864 2 1
Q ss_pred CceeEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEE
Q 012587 224 PNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVI 303 (460)
Q Consensus 224 ~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~ 303 (460)
++++.|||+....... ..++++.+||+.++.++||||||||....+.+++++++.+|+.++.+|||++
T Consensus 232 ~~v~~VGPl~~~~~~~------------~~~~~c~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flW~~ 299 (481)
T PLN02992 232 VPVYPIGPLCRPIQSS------------KTDHPVLDWLNKQPNESVLYISFGSGGSLSAKQLTELAWGLEMSQQRFVWVV 299 (481)
T ss_pred CceEEecCccCCcCCC------------cchHHHHHHHHcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 5699999997532110 1345688999988889999999999999999999999999999999999999
Q ss_pred ccCCCCC-------------CC-CCCCCchHHHHHhcCC-ceeeeecChHhhhcccccccccccCChhHHHHHHHhCCce
Q 012587 304 RPDLISG-------------KD-GENQIPEELLEATKER-GCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPM 368 (460)
Q Consensus 304 ~~~~~~~-------------~~-~~~~~~~~~~~~~~~n-~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~ 368 (460)
+.+...+ .. ....+|++|.++..++ +++.+|+||.+||+|+++++||||||+||++||+++||||
T Consensus 300 r~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~f~eR~~~rg~vv~~W~PQ~~iL~h~~vg~FitH~G~nS~~Eal~~GVP~ 379 (481)
T PLN02992 300 RPPVDGSACSAYFSANGGETRDNTPEYLPEGFVSRTHDRGFVVPSWAPQAEILAHQAVGGFLTHCGWSSTLESVVGGVPM 379 (481)
T ss_pred eCCcccccccccccCcccccccchhhhCCHHHHHHhcCCCEEEeecCCHHHHhCCcccCeeEecCchhHHHHHHHcCCCE
Confidence 7431100 00 0124788888887654 4556999999999999999999999999999999999999
Q ss_pred ecccccccchhhHHHHHhhhceeeeecC---CcchHHHHHHHHHHHh-HhHHHHHHHHHHHHHHHHHHhh--cCCChHHH
Q 012587 369 ICWPSFADQQINSRFVGEVWKLGLDIKD---LCDRNIVEKAVNDLMV-ERKEEFMESADRMANLAKKSVN--KGGSSYCN 442 (460)
Q Consensus 369 l~~P~~~DQ~~na~~~~e~~G~g~~~~~---~~~~~~l~~~i~~~l~-~~~~~~~~~a~~l~~~~~~~~~--~~g~~~~~ 442 (460)
|++|+++||+.||+++++++|+|+.+++ .++.++|+++|+++|. +++.++|++++++++++++++. +||+|.++
T Consensus 380 l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~l~~av~~vm~~~~g~~~r~~a~~~~~~a~~Av~~~~GGSS~~~ 459 (481)
T PLN02992 380 IAWPLFAEQNMNAALLSDELGIAVRSDDPKEVISRSKIEALVRKVMVEEEGEEMRRKVKKLRDTAEMSLSIDGGGVAHES 459 (481)
T ss_pred EecCccchhHHHHHHHHHHhCeeEEecCCCCcccHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCCCchHHH
Confidence 9999999999999999658999999962 4899999999999997 4567999999999999999994 59999999
Q ss_pred HHHHHHHHHh
Q 012587 443 LDRLVNDIKM 452 (460)
Q Consensus 443 ~~~~~~~l~~ 452 (460)
+++|++.+..
T Consensus 460 l~~~v~~~~~ 469 (481)
T PLN02992 460 LCRVTKECQR 469 (481)
T ss_pred HHHHHHHHHH
Confidence 9999999764
|
|
| >PLN02764 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-58 Score=445.89 Aligned_cols=430 Identities=23% Similarity=0.357 Sum_probs=319.8
Q ss_pred CCCCCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecC--CCCCCC
Q 012587 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLT--DGLPRD 78 (460)
Q Consensus 1 ~~~~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 78 (460)
|+. .++||+++|++++||++|++.||+.|+.+|+.|||++++.+...+...... .. ...+.+.++| ++++++
T Consensus 1 ~~~-~~~Hvvl~P~paqGHi~P~l~LAk~La~~g~~vT~~tt~~~~~~~~~~~~~--~~---~~~v~~~~~p~~~glp~g 74 (453)
T PLN02764 1 MGG-LKFHVLMYPWFATGHMTPFLFLANKLAEKGHTVTFLLPKKALKQLEHLNLF--PH---NIVFRSVTVPHVDGLPVG 74 (453)
T ss_pred CCC-CCcEEEEECCcccccHHHHHHHHHHHHhCCCEEEEEeCcchhhhhcccccC--CC---CceEEEEECCCcCCCCCc
Confidence 455 357999999999999999999999999999999999998876655432100 00 0126677776 566655
Q ss_pred CCCC---CCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEEEecchhHHHHHHhhcccc
Q 012587 79 HPRT---PDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDI 155 (460)
Q Consensus 79 ~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~ 155 (460)
.... .......+......+.+.++++++.. +||+||+|. +.|+..+|+++|||++.++++++.....+.. +..
T Consensus 75 ~e~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~--~~~~iV~D~-~~w~~~vA~~~gIP~~~f~~~~a~~~~~~~~-~~~ 150 (453)
T PLN02764 75 TETVSEIPVTSADLLMSAMDLTRDQVEVVVRAV--EPDLIFFDF-AHWIPEVARDFGLKTVKYVVVSASTIASMLV-PGG 150 (453)
T ss_pred ccccccCChhHHHHHHHHHHHhHHHHHHHHHhC--CCCEEEECC-chhHHHHHHHhCCCEEEEEcHHHHHHHHHhc-ccc
Confidence 2211 10111223333334668888888886 889999995 7899999999999999999999887766542 210
Q ss_pred ccCCCCCCCC----CccCCCCCCcccCC--CCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCC-CceeE
Q 012587 156 IDAGELPIKG----FLRCRDLPSFCRVN--DPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSC-PNIYS 228 (460)
Q Consensus 156 ~~~~~~p~~~----~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~-~~~~~ 228 (460)
......|... -++.++++.+.... ...........+......+++.+++|||++||+..++.++. .. ++++.
T Consensus 151 ~~~~~~pglp~~~v~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~vlvNTf~eLE~~~~~~~~~-~~~~~v~~ 229 (453)
T PLN02764 151 ELGVPPPGYPSSKVLLRKQDAYTMKNLEPTNTIDVGPNLLERVTTSLMNSDVIAIRTAREIEGNFCDYIEK-HCRKKVLL 229 (453)
T ss_pred cCCCCCCCCCCCcccCcHhhCcchhhcCCCccchhHHHHHHHHHHhhccCCEEEEeccHHhhHHHHHHHHh-hcCCcEEE
Confidence 0000011100 13334444322111 11111222222232445678899999999999999999976 53 67999
Q ss_pred eCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEccCCC
Q 012587 229 IGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLI 308 (460)
Q Consensus 229 vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~ 308 (460)
|||+...... . ...++++.+|||.+++++||||||||....+..++.+++.+|+..+.+|+|+++.+..
T Consensus 230 VGPL~~~~~~----------~-~~~~~~cl~WLD~q~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~pflwv~r~~~~ 298 (453)
T PLN02764 230 TGPVFPEPDK----------T-RELEERWVKWLSGYEPDSVVFCALGSQVILEKDQFQELCLGMELTGSPFLVAVKPPRG 298 (453)
T ss_pred eccCccCccc----------c-ccchhHHHHHHhCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence 9999753210 0 0124578999999999999999999999999999999999999999999999985321
Q ss_pred CCCCCCCCCchHHHHHhcCCceee-eecChHhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHHHHHhh
Q 012587 309 SGKDGENQIPEELLEATKERGCIA-GWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEV 387 (460)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~n~~~~-~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~ 387 (460)
.+ .....+|+++.++..++..++ +|+||.+||+|+++++||||||+||++||+++|||||++|++.||+.||+++++.
T Consensus 299 ~~-~~~~~lp~~f~~r~~grG~v~~~W~PQ~~vL~h~~v~~FvtH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~ 377 (453)
T PLN02764 299 SS-TIQEALPEGFEERVKGRGVVWGGWVQQPLILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDE 377 (453)
T ss_pred Cc-chhhhCCcchHhhhccCCcEEeCCCCHHHHhcCcccCeEEecCCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHH
Confidence 10 011258899988876666555 9999999999999999999999999999999999999999999999999999766
Q ss_pred hceeeeec-C---CcchHHHHHHHHHHHhH---hHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHhhcCCC
Q 012587 388 WKLGLDIK-D---LCDRNIVEKAVNDLMVE---RKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKMMSSQP 457 (460)
Q Consensus 388 ~G~g~~~~-~---~~~~~~l~~~i~~~l~~---~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~ 457 (460)
+|+|+.+. + .++.++|+++|+++|++ ++.++|++++++++.+++ +|++.+++++||+.+.+....+
T Consensus 378 ~g~gv~~~~~~~~~~~~e~i~~av~~vm~~~~~~g~~~r~~a~~~~~~~~~----~GSS~~~l~~lv~~~~~~~~~~ 450 (453)
T PLN02764 378 LKVSVEVAREETGWFSKESLRDAINSVMKRDSEIGNLVKKNHTKWRETLAS----PGLLTGYVDNFIESLQDLVSGT 450 (453)
T ss_pred hceEEEeccccCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHHhcccc
Confidence 89999985 2 48999999999999964 356799999999999976 7999999999999998875543
|
|
| >PLN02208 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-58 Score=450.42 Aligned_cols=418 Identities=21% Similarity=0.332 Sum_probs=310.8
Q ss_pred CCCCCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEec--C--CCCC
Q 012587 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTL--T--DGLP 76 (460)
Q Consensus 1 ~~~~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~ 76 (460)
||. ..||+++|+|++||++|++.||+.|+++||+|||++++.+...+...... ..++++..+ + ++++
T Consensus 1 ~~~--~~hvv~~P~paqGHi~P~l~LAk~La~~G~~VT~vtt~~~~~~i~~~~a~-------~~~i~~~~l~~p~~dgLp 71 (442)
T PLN02208 1 MEP--KFHAFMFPWFAFGHMIPFLHLANKLAEKGHRVTFLLPKKAQKQLEHHNLF-------PDSIVFHPLTIPPVNGLP 71 (442)
T ss_pred CCC--CCEEEEecCccccHHHHHHHHHHHHHhCCCEEEEEeccchhhhhhcccCC-------CCceEEEEeCCCCccCCC
Confidence 454 46999999999999999999999999999999999997766665443210 113455543 3 4555
Q ss_pred CCCCCCCCCh----HHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEEEecchhHHHHHHhhc
Q 012587 77 RDHPRTPDKF----PELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCI 152 (460)
Q Consensus 77 ~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~ 152 (460)
++.. ...+. ...+......+.+.++++++.+ ++|+||+| ++.|+..+|+++|||++.++++++.... +.++
T Consensus 72 ~g~~-~~~~l~~~l~~~~~~~~~~~~~~l~~~L~~~--~~~cVV~D-~~~wa~~vA~e~giP~~~f~~~~a~~~~-~~~~ 146 (442)
T PLN02208 72 AGAE-TTSDIPISMDNLLSEALDLTRDQVEAAVRAL--RPDLIFFD-FAQWIPEMAKEHMIKSVSYIIVSATTIA-HTHV 146 (442)
T ss_pred CCcc-cccchhHHHHHHHHHHHHHHHHHHHHHHhhC--CCeEEEEC-CcHhHHHHHHHhCCCEEEEEhhhHHHHH-HHcc
Confidence 5432 11122 2233333445677788888876 89999999 5789999999999999999999887654 4443
Q ss_pred cccccCCCCCCCC----CccCCCCCCcccCCCCCChHHHHHHHH-hhhhcCCCEEEEcChhhhchhHHHHHhhcCC-Cce
Q 012587 153 PDIIDAGELPIKG----FLRCRDLPSFCRVNDPMDPHLLLFARE-TRLSAHADGLILNTFEDLEGPILSQIRNHSC-PNI 226 (460)
Q Consensus 153 ~~~~~~~~~p~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~-~~~ 226 (460)
+........|... .++..+++.+ .........+.+. .....+++.+++|+|++||+..+++++. .. +++
T Consensus 147 ~~~~~~~~~pglp~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~vl~Ntf~eLE~~~~~~~~~-~~~~~v 221 (442)
T PLN02208 147 PGGKLGVPPPGYPSSKVLFRENDAHAL----ATLSIFYKRLYHQITTGLKSCDVIALRTCKEIEGKFCDYISR-QYHKKV 221 (442)
T ss_pred CccccCCCCCCCCCcccccCHHHcCcc----cccchHHHHHHHHHHhhhccCCEEEEECHHHHHHHHHHHHHh-hcCCCE
Confidence 3211000011100 1233444432 1112223333322 2344678899999999999999998876 43 789
Q ss_pred eEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEccC
Q 012587 227 YSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPD 306 (460)
Q Consensus 227 ~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~ 306 (460)
+.|||+........ ..++++.+|||.+++++||||||||....+.+.+.+++.+++..+.+++|+++.+
T Consensus 222 ~~vGpl~~~~~~~~-----------~~~~~~~~wLd~~~~~sVvyvSfGS~~~l~~~q~~e~~~~l~~s~~pf~wv~r~~ 290 (442)
T PLN02208 222 LLTGPMFPEPDTSK-----------PLEEQWSHFLSGFPPKSVVFCSLGSQIILEKDQFQELCLGMELTGLPFLIAVKPP 290 (442)
T ss_pred EEEeecccCcCCCC-----------CCHHHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEEeCC
Confidence 99999985422100 1356799999988889999999999998899989998888888888999998743
Q ss_pred CCCCCCCCCCCchHHHHHhc-CCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHHHHH
Q 012587 307 LISGKDGENQIPEELLEATK-ERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVG 385 (460)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~-~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~ 385 (460)
... ......+|++|.++.. .|+.+.+|+||.+||+|+++++||||||+||++||+++|||||++|+++||+.||++++
T Consensus 291 ~~~-~~~~~~lp~~f~~r~~~~g~~v~~W~PQ~~iL~H~~v~~FvtHcG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~ 369 (442)
T PLN02208 291 RGS-STVQEGLPEGFEERVKGRGVVWGGWVQQPLILDHPSIGCFVNHCGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMT 369 (442)
T ss_pred Ccc-cchhhhCCHHHHHHHhcCCcEeeccCCHHHHhcCCccCeEEccCCchHHHHHHHcCCCEEecCcchhhHHHHHHHH
Confidence 110 0011257888888754 46666699999999999999999999999999999999999999999999999999886
Q ss_pred hhhceeeeec-CC---cchHHHHHHHHHHHhH---hHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHhh
Q 012587 386 EVWKLGLDIK-DL---CDRNIVEKAVNDLMVE---RKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKMM 453 (460)
Q Consensus 386 e~~G~g~~~~-~~---~~~~~l~~~i~~~l~~---~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~~ 453 (460)
+.+|+|+.+. .+ +++++|+++|++++++ ++.++|++++++++.+.+ +|+|.+++++||+.+.++
T Consensus 370 ~~~g~gv~~~~~~~~~~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~~~~~~~~----~gsS~~~l~~~v~~l~~~ 440 (442)
T PLN02208 370 EEFEVSVEVSREKTGWFSKESLSNAIKSVMDKDSDLGKLVRSNHTKLKEILVS----PGLLTGYVDKFVEELQEY 440 (442)
T ss_pred HHhceeEEeccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHhc----CCcHHHHHHHHHHHHHHh
Confidence 6689999996 33 8999999999999963 367799999999999855 678999999999999654
|
|
| >PLN03007 UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-58 Score=457.57 Aligned_cols=442 Identities=28% Similarity=0.476 Sum_probs=312.6
Q ss_pred CCCCCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCC-CCceEEecC---CCCC
Q 012587 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQI-PGFQFKTLT---DGLP 76 (460)
Q Consensus 1 ~~~~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~ 76 (460)
|+. +++||+++|+|++||++|++.||+.|+.|||+|||++++.+...+.+............ ..+.+.++| .+++
T Consensus 1 ~~~-~~~hVvlvp~pa~GHi~P~L~LAk~L~~rG~~VT~vtt~~~~~~i~~~~a~~~~~~~~~~~~~~~~~~p~~~~glP 79 (482)
T PLN03007 1 MNH-EKLHILFFPFMAHGHMIPTLDMAKLFSSRGAKSTILTTPLNAKIFEKPIEAFKNLNPGLEIDIQIFNFPCVELGLP 79 (482)
T ss_pred CCC-CCcEEEEECCCccccHHHHHHHHHHHHhCCCEEEEEECCCchhhhhhhhhhhcccCCCCcceEEEeeCCCCcCCCC
Confidence 444 35799999999999999999999999999999999999888766654321110000000 024445555 3455
Q ss_pred CCCCCC-------CCChHHHHHHHH---hhCcHHHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEEEecchhHHH
Q 012587 77 RDHPRT-------PDKFPELVDSLN---CATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAF 146 (460)
Q Consensus 77 ~~~~~~-------~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~ 146 (460)
++.... ......++..+. ..+.+.+++++++. +||+||+|.++.|+..+|+++|||++.+++++++..
T Consensus 80 ~g~e~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~--~~~~IV~D~~~~w~~~vA~~lgIP~v~f~~~~a~~~ 157 (482)
T PLN03007 80 EGCENVDFITSNNNDDSGDLFLKFLFSTKYFKDQLEKLLETT--RPDCLVADMFFPWATEAAEKFGVPRLVFHGTGYFSL 157 (482)
T ss_pred CCcccccccccccccchHHHHHHHHHHHHHHHHHHHHHHhcC--CCCEEEECCcchhHHHHHHHhCCCeEEeecccHHHH
Confidence 432111 011222222222 23455556666654 899999999999999999999999999999887766
Q ss_pred HHHhhccccccCCC---------CCCCC---CccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhH
Q 012587 147 WSFHCIPDIIDAGE---------LPIKG---FLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPI 214 (460)
Q Consensus 147 ~~~~~~~~~~~~~~---------~p~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~ 214 (460)
....++....+... .|... .++..+++. ......+...+........+++.+++|++++||++.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~pg~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~vl~Nt~~~le~~~ 233 (482)
T PLN03007 158 CASYCIRVHKPQKKVASSSEPFVIPDLPGDIVITEEQIND----ADEESPMGKFMKEVRESEVKSFGVLVNSFYELESAY 233 (482)
T ss_pred HHHHHHHhcccccccCCCCceeeCCCCCCccccCHHhcCC----CCCchhHHHHHHHHHhhcccCCEEEEECHHHHHHHH
Confidence 55442221111000 11000 011111111 111122333333444456778899999999999998
Q ss_pred HHHHhhcCC-CceeEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHh
Q 012587 215 LSQIRNHSC-PNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLV 293 (460)
Q Consensus 215 ~~~~~~~~~-~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~ 293 (460)
.+.+++ .. .++++|||+........... ......+..++++.+||+.++++++|||||||+...+...+..++.+++
T Consensus 234 ~~~~~~-~~~~~~~~VGPl~~~~~~~~~~~-~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~~~~l~ 311 (482)
T PLN03007 234 ADFYKS-FVAKRAWHIGPLSLYNRGFEEKA-ERGKKANIDEQECLKWLDSKKPDSVIYLSFGSVASFKNEQLFEIAAGLE 311 (482)
T ss_pred HHHHHh-ccCCCEEEEcccccccccccccc-ccCCccccchhHHHHHHhcCCCCceEEEeecCCcCCCHHHHHHHHHHHH
Confidence 888876 55 47999999864322100000 0000111224668999998888999999999999888899999999999
Q ss_pred hCCCcEEEEEccCCCCCCCCCCCCchHHHHHh-cCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceeccc
Q 012587 294 HSKKSFLWVIRPDLISGKDGENQIPEELLEAT-KERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWP 372 (460)
Q Consensus 294 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P 372 (460)
.++++|||+++.+...+ .....+|+++.++. +.|+++.+|+||.+||+|+++++||||||+||++||+++|||||++|
T Consensus 312 ~~~~~flw~~~~~~~~~-~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GVP~v~~P 390 (482)
T PLN03007 312 GSGQNFIWVVRKNENQG-EKEEWLPEGFEERTKGKGLIIRGWAPQVLILDHQATGGFVTHCGWNSLLEGVAAGLPMVTWP 390 (482)
T ss_pred HCCCCEEEEEecCCccc-chhhcCCHHHHHHhccCCEEEecCCCHHHHhccCccceeeecCcchHHHHHHHcCCCeeecc
Confidence 99999999997532110 01124788887764 56778889999999999999999999999999999999999999999
Q ss_pred ccccchhhHHHHHhhhceeeee--------c-CCcchHHHHHHHHHHHhH-hHHHHHHHHHHHHHHHHHHhhcCCChHHH
Q 012587 373 SFADQQINSRFVGEVWKLGLDI--------K-DLCDRNIVEKAVNDLMVE-RKEEFMESADRMANLAKKSVNKGGSSYCN 442 (460)
Q Consensus 373 ~~~DQ~~na~~~~e~~G~g~~~--------~-~~~~~~~l~~~i~~~l~~-~~~~~~~~a~~l~~~~~~~~~~~g~~~~~ 442 (460)
+++||+.||+++++.+++|+.+ + ..+++++|+++|+++|.+ ++.+||+||+++++.+++++.+||+|+++
T Consensus 391 ~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~~~~~~r~~a~~~~~~a~~a~~~gGsS~~~ 470 (482)
T PLN03007 391 VGAEQFYNEKLVTQVLRTGVSVGAKKLVKVKGDFISREKVEKAVREVIVGEEAEERRLRAKKLAEMAKAAVEEGGSSFND 470 (482)
T ss_pred chhhhhhhHHHHHHhhcceeEeccccccccccCcccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhCCCcHHHH
Confidence 9999999999886544555443 3 457999999999999985 34599999999999999999999999999
Q ss_pred HHHHHHHHHh
Q 012587 443 LDRLVNDIKM 452 (460)
Q Consensus 443 ~~~~~~~l~~ 452 (460)
+++||+.+..
T Consensus 471 l~~~v~~~~~ 480 (482)
T PLN03007 471 LNKFMEELNS 480 (482)
T ss_pred HHHHHHHHHh
Confidence 9999999874
|
|
| >PLN02534 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-58 Score=452.60 Aligned_cols=440 Identities=29% Similarity=0.472 Sum_probs=320.2
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecC-----CCCCCC
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLT-----DGLPRD 78 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 78 (460)
.+..||+++|+|++||++|++.||+.|+.+|+.|||++++.+...+.......... ...++|..+| ++++++
T Consensus 6 ~~~~Hvv~vPfpaqGHi~P~l~LAk~La~~G~~vT~v~t~~n~~~~~~~~~~~~~~---~~~i~~~~lp~p~~~dglp~~ 82 (491)
T PLN02534 6 AKQLHFVLIPLMAQGHMIPMIDMARLLAERGVIVSLVTTPQNASRFAKTIDRARES---GLPIRLVQIPFPCKEVGLPIG 82 (491)
T ss_pred CCCCEEEEECCCCcchHHHHHHHHHHHHhCCCeEEEEECCCcHHHHhhhhhhcccc---CCCeEEEEcCCCCccCCCCCC
Confidence 34469999999999999999999999999999999999988876664432100000 1137888887 577655
Q ss_pred CCCCC--C--ChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEEEecchhHHHHHHhhccc
Q 012587 79 HPRTP--D--KFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPD 154 (460)
Q Consensus 79 ~~~~~--~--~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~ 154 (460)
..... . .+...+......+.+.+.+++.....+|++||+|.++.|+..+|+++|||++.+++++++......++..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lL~~~~~pp~cIV~D~f~~Wa~dVA~~lgIP~v~F~t~~a~~~~~~~~~~~ 162 (491)
T PLN02534 83 CENLDTLPSRDLLRKFYDAVDKLQQPLERFLEQAKPPPSCIISDKCLSWTSKTAQRFNIPRIVFHGMCCFSLLSSHNIRL 162 (491)
T ss_pred ccccccCCcHHHHHHHHHHHHHhHHHHHHHHHhcCCCCcEEEECCccHHHHHHHHHhCCCeEEEecchHHHHHHHHHHHH
Confidence 32111 0 1222222333346677788877642468999999999999999999999999999998877655322111
Q ss_pred ccc-----CC----CCCCCC---CccCCCCCCcccCCCCCChHHHHHHHHhh-hhcCCCEEEEcChhhhchhHHHHHhhc
Q 012587 155 IID-----AG----ELPIKG---FLRCRDLPSFCRVNDPMDPHLLLFARETR-LSAHADGLILNTFEDLEGPILSQIRNH 221 (460)
Q Consensus 155 ~~~-----~~----~~p~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~le~p~~~~~~~~ 221 (460)
..+ .. ..|... .++..+++..+... .....+..... ....++.+++|||++||+..++.++.
T Consensus 163 ~~~~~~~~~~~~~~~iPg~p~~~~l~~~dlp~~~~~~----~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~l~~l~~- 237 (491)
T PLN02534 163 HNAHLSVSSDSEPFVVPGMPQSIEITRAQLPGAFVSL----PDLDDVRNKMREAESTAFGVVVNSFNELEHGCAEAYEK- 237 (491)
T ss_pred hcccccCCCCCceeecCCCCccccccHHHCChhhcCc----ccHHHHHHHHHhhcccCCEEEEecHHHhhHHHHHHHHh-
Confidence 000 00 011100 12333343322111 11222222222 22456789999999999999999876
Q ss_pred CC-CceeEeCccccccccCCCccccCCCCcc-ccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcE
Q 012587 222 SC-PNIYSIGPLNAHLKVRIPEKTYSSSSLW-KIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSF 299 (460)
Q Consensus 222 ~~-~~~~~vG~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~ 299 (460)
.. ++++.|||+.......... ... +... ..++++.+|||.+++++||||||||......+.+.+++.+|+.++.+|
T Consensus 238 ~~~~~v~~VGPL~~~~~~~~~~-~~~-~~~~~~~~~~cl~wLd~~~~~sVvyvsfGS~~~~~~~q~~e~a~gl~~~~~~f 315 (491)
T PLN02534 238 AIKKKVWCVGPVSLCNKRNLDK-FER-GNKASIDETQCLEWLDSMKPRSVIYACLGSLCRLVPSQLIELGLGLEASKKPF 315 (491)
T ss_pred hcCCcEEEECcccccccccccc-ccc-CCccccchHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCE
Confidence 55 6899999997432110000 000 0111 123468899999888999999999999999999999999999999999
Q ss_pred EEEEccCCCCCCCCCCCCchHHHHHh-cCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceecccccccch
Q 012587 300 LWVIRPDLISGKDGENQIPEELLEAT-KERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQ 378 (460)
Q Consensus 300 i~~~~~~~~~~~~~~~~~~~~~~~~~-~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~ 378 (460)
||+++.+..........+|+++.++. +.++++.+|+||.+||+|+++++||||||+||++||+++|||||++|.+.||+
T Consensus 316 lW~~r~~~~~~~~~~~~~p~gf~~~~~~~g~~v~~w~pq~~iL~h~~v~~fvtH~G~ns~~ea~~~GvP~v~~P~~~dq~ 395 (491)
T PLN02534 316 IWVIKTGEKHSELEEWLVKENFEERIKGRGLLIKGWAPQVLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWPLFAEQF 395 (491)
T ss_pred EEEEecCccccchhhhcCchhhHHhhccCCeeccCCCCHHHHhcCCccceEEecCccHHHHHHHHcCCCEEeccccccHH
Confidence 99997431110000113578888763 56777779999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHhhhceeeeec-C-------------CcchHHHHHHHHHHHh---HhHHHHHHHHHHHHHHHHHHhhcCCChHH
Q 012587 379 INSRFVGEVWKLGLDIK-D-------------LCDRNIVEKAVNDLMV---ERKEEFMESADRMANLAKKSVNKGGSSYC 441 (460)
Q Consensus 379 ~na~~~~e~~G~g~~~~-~-------------~~~~~~l~~~i~~~l~---~~~~~~~~~a~~l~~~~~~~~~~~g~~~~ 441 (460)
.||++++|.+|+|+.+. . ..++++|+++|+++|. ++|.++|+||+++++.+++++.+||+|.+
T Consensus 396 ~na~~~~e~~~vGv~~~~~~~~~~~~~~~~~~~v~~eev~~~v~~~m~~~~eeg~~~R~rA~elk~~a~~Av~~GGSS~~ 475 (491)
T PLN02534 396 LNEKLIVEVLRIGVRVGVEVPVRWGDEERVGVLVKKDEVEKAVKTLMDDGGEEGERRRRRAQELGVMARKAMELGGSSHI 475 (491)
T ss_pred HHHHHHHHhhcceEEecccccccccccccccCccCHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHhcCCCcHHH
Confidence 99999988999999873 0 2689999999999995 56789999999999999999999999999
Q ss_pred HHHHHHHHHHhh
Q 012587 442 NLDRLVNDIKMM 453 (460)
Q Consensus 442 ~~~~~~~~l~~~ 453 (460)
++++||+++...
T Consensus 476 nl~~fv~~i~~~ 487 (491)
T PLN02534 476 NLSILIQDVLKQ 487 (491)
T ss_pred HHHHHHHHHHHH
Confidence 999999999754
|
|
| >PLN03015 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-57 Score=443.60 Aligned_cols=429 Identities=25% Similarity=0.415 Sum_probs=322.7
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhC-CCeEEEEeCccchhHHhhcc-ccccccccCCCCceEEecCCCCCCCCCCC
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGHA-GIKITFLNTEHYYDRVIRHS-SDAFSRYMQIPGFQFKTLTDGLPRDHPRT 82 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~r-GH~Vt~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (460)
...||+++|+|++||++|++.||+.|+.+ |..|||++++.+...+.... ...... ..++++..+|....++....
T Consensus 2 ~~pHvvl~P~p~qGHi~P~l~LAk~La~~~g~~vT~v~t~~~~~~~~~~~~~~~~~~---~~~i~~~~lp~~~~~~l~~~ 78 (470)
T PLN03015 2 DQPHALLVASPGLGHLIPILELGNRLSSVLNIHVTILAVTSGSSSPTETEAIHAAAA---RTTCQITEIPSVDVDNLVEP 78 (470)
T ss_pred CCcEEEEECCcccccHHHHHHHHHHHHhCCCCeEEEEECCCchhhhccccccccccC---CCceEEEECCCCccccCCCC
Confidence 34599999999999999999999999987 99999999876554432111 110000 11488888885332221000
Q ss_pred CCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCc-eEEEecchhHHHHHHhhccccc---cC
Q 012587 83 PDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVS-IIYFRTISACAFWSFHCIPDII---DA 158 (460)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP-~v~~~~~~~~~~~~~~~~~~~~---~~ 158 (460)
..+....+......+.+.++++++.+..+|++||+|.++.|+..+|+++||| .+.++++.+.....+.+++... ..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~ciV~D~f~~w~~~vA~~lgIP~~~~f~~~~a~~~~~~~~l~~~~~~~~~ 158 (470)
T PLN03015 79 DATIFTKMVVKMRAMKPAVRDAVKSMKRKPTVMIVDFFGTALMSIADDVGVTAKYVYIPSHAWFLAVMVYLPVLDTVVEG 158 (470)
T ss_pred CccHHHHHHHHHHhchHHHHHHHHhcCCCCeEEEEcCCcHHHHHHHHHcCCCEEEEEcCHHHHHHHHHHhhhhhhccccc
Confidence 0133333444445678889999987634689999999999999999999999 5888888777765555543211 11
Q ss_pred C--------CCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcC-------C
Q 012587 159 G--------ELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHS-------C 223 (460)
Q Consensus 159 ~--------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~-------~ 223 (460)
. .+|...-++..+++..+.. ........+.+......+++.+++|||++||+..++.++. . .
T Consensus 159 ~~~~~~~~~~vPg~p~l~~~dlp~~~~~--~~~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~~~~l~~-~~~~~~~~~ 235 (470)
T PLN03015 159 EYVDIKEPLKIPGCKPVGPKELMETMLD--RSDQQYKECVRSGLEVPMSDGVLVNTWEELQGNTLAALRE-DMELNRVMK 235 (470)
T ss_pred ccCCCCCeeeCCCCCCCChHHCCHhhcC--CCcHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHHh-hcccccccC
Confidence 0 0111112444555533321 1122233344444556789999999999999999998876 4 2
Q ss_pred CceeEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEE
Q 012587 224 PNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVI 303 (460)
Q Consensus 224 ~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~ 303 (460)
++++.|||+...... ...++++.+|||.++.++||||||||....+.+++++++.+|+.++.+|||++
T Consensus 236 ~~v~~VGPl~~~~~~------------~~~~~~~~~WLd~~~~~sVvyvsFGS~~~~~~~q~~ela~gl~~s~~~FlWv~ 303 (470)
T PLN03015 236 VPVYPIGPIVRTNVH------------VEKRNSIFEWLDKQGERSVVYVCLGSGGTLTFEQTVELAWGLELSGQRFVWVL 303 (470)
T ss_pred CceEEecCCCCCccc------------ccchHHHHHHHHhCCCCCEEEEECCcCCcCCHHHHHHHHHHHHhCCCcEEEEE
Confidence 569999999742110 01234699999998889999999999999999999999999999999999999
Q ss_pred ccCCCC-C-----CC-CCCCCchHHHHHhcCCcee-eeecChHhhhcccccccccccCChhHHHHHHHhCCceecccccc
Q 012587 304 RPDLIS-G-----KD-GENQIPEELLEATKERGCI-AGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFA 375 (460)
Q Consensus 304 ~~~~~~-~-----~~-~~~~~~~~~~~~~~~n~~~-~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~ 375 (460)
+.+... + .. ..+.+|+++.++..++..+ .+|+||.+||+|+++++||||||+||++||+++|||||++|+++
T Consensus 304 r~~~~~~~~~~~~~~~~~~~lp~~f~er~~~rGl~v~~W~PQ~~vL~h~~vg~fvtH~GwnS~~Eai~~GvP~v~~P~~~ 383 (470)
T PLN03015 304 RRPASYLGASSSDDDQVSASLPEGFLDRTRGVGLVVTQWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPIVAWPLYA 383 (470)
T ss_pred ecCccccccccccccchhhcCChHHHHhhccCceEEEecCCHHHHhccCccCeEEecCCchhHHHHHHcCCCEEeccccc
Confidence 743110 0 00 1125788888887776655 59999999999999999999999999999999999999999999
Q ss_pred cchhhHHHHHhhhceeeeec-----CCcchHHHHHHHHHHHh---HhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHH
Q 012587 376 DQQINSRFVGEVWKLGLDIK-----DLCDRNIVEKAVNDLMV---ERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLV 447 (460)
Q Consensus 376 DQ~~na~~~~e~~G~g~~~~-----~~~~~~~l~~~i~~~l~---~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~ 447 (460)
||+.||+++++.+|+|+.+. +..+.++|+++|+++|. ++|.++|+||+++++..++++++||+|.+++++|+
T Consensus 384 DQ~~na~~~~~~~gvg~~~~~~~~~~~v~~e~i~~~v~~lm~~~~eeg~~~R~ra~~lk~~a~~Av~eGGSS~~nl~~~~ 463 (470)
T PLN03015 384 EQWMNATLLTEEIGVAVRTSELPSEKVIGREEVASLVRKIVAEEDEEGQKIRAKAEEVRVSSERAWSHGGSSYNSLFEWA 463 (470)
T ss_pred chHHHHHHHHHHhCeeEEecccccCCccCHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 99999999977899999994 25899999999999994 56789999999999999999999999999999999
Q ss_pred HHHH
Q 012587 448 NDIK 451 (460)
Q Consensus 448 ~~l~ 451 (460)
+.+.
T Consensus 464 ~~~~ 467 (470)
T PLN03015 464 KRCY 467 (470)
T ss_pred Hhcc
Confidence 8864
|
|
| >PLN02554 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-58 Score=454.81 Aligned_cols=431 Identities=27% Similarity=0.463 Sum_probs=317.9
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCC--CeEEEEeCccchhHHhh-ccc-cccccccCCCCceEEecCCCCCCCCCCC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAG--IKITFLNTEHYYDRVIR-HSS-DAFSRYMQIPGFQFKTLTDGLPRDHPRT 82 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rG--H~Vt~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (460)
+||+++|+|++||++|++.||+.|+.+| ..|||++++.+...+.. ... ..... ...++++|..+|.+.++.. .
T Consensus 3 ~hvvl~P~paqGHi~P~l~LAk~La~~G~~~~vT~v~t~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~lp~~~~~~~-~- 79 (481)
T PLN02554 3 IELVFIPSPGIGHLRPTVELAKLLVDSDDRLSITVIIIPSRSGDDASSSAYIASLSA-SSEDRLRYEVISAGDQPTT-E- 79 (481)
T ss_pred eEEEEeCCcchhhHHHHHHHHHHHHhCCCCEEEEEEeCCCccchhhhhhhhhhhccc-CCCCCeEEEEcCCCCCCcc-c-
Confidence 5999999999999999999999999998 88999999877543210 000 00000 0022589999987654221 1
Q ss_pred CCChHHHHHHHHhhCcHHHHHHHHcC---CCCc-cEEEEcCCcchHHHHHHHhCCceEEEecchhHHHHHHhhccccccC
Q 012587 83 PDKFPELVDSLNCATPPLLKEMVSDS---KSPV-NCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDA 158 (460)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~p-D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 158 (460)
...+..++..+...+.+.+++++... ..+| ++||+|.++.|+..+|+++|||++.++++++.....+.+++.....
T Consensus 80 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~pv~cvV~D~f~~wa~dvA~~lgIP~~~F~t~sa~~~~~~~~~~~~~~~ 159 (481)
T PLN02554 80 DPTFQSYIDNQKPKVRDAVAKLVDDSSTPSSPRLAGFVVDMFCTSMIDVANEFGVPSYMFYTSNATFLGLQLHVQMLYDE 159 (481)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEECCcchhHHHHHHHhCCCEEEEeCCcHHHHHHHHhhhhhccc
Confidence 11222233333333344444444331 0133 8999999999999999999999999999999888877665432111
Q ss_pred ------CC--------CCCCC-CccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhc--
Q 012587 159 ------GE--------LPIKG-FLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNH-- 221 (460)
Q Consensus 159 ------~~--------~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~-- 221 (460)
.. .|... -++..+++..+. .......+.+......+++.+++|++++||......+...
T Consensus 160 ~~~~~~~~~~~~~~v~iPgl~~pl~~~dlp~~~~----~~~~~~~~~~~~~~~~~~~gvlvNt~~eLe~~~~~~l~~~~~ 235 (481)
T PLN02554 160 KKYDVSELEDSEVELDVPSLTRPYPVKCLPSVLL----SKEWLPLFLAQARRFREMKGILVNTVAELEPQALKFFSGSSG 235 (481)
T ss_pred cccCccccCCCCceeECCCCCCCCCHHHCCCccc----CHHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHHhccc
Confidence 00 11000 123334433221 1122334444455567789999999999999888877641
Q ss_pred CCCceeEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEE
Q 012587 222 SCPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLW 301 (460)
Q Consensus 222 ~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~ 301 (460)
..|+++.|||+........ . .....+.++.+|++.++++++|||||||+...+..+++.++.+++.++.+|||
T Consensus 236 ~~~~v~~vGpl~~~~~~~~-~------~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~la~~l~~~~~~flW 308 (481)
T PLN02554 236 DLPPVYPVGPVLHLENSGD-D------SKDEKQSEILRWLDEQPPKSVVFLCFGSMGGFSEEQAREIAIALERSGHRFLW 308 (481)
T ss_pred CCCCEEEeCCCcccccccc-c------cccccchHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHHcCCCeEE
Confidence 2378999999943221100 0 00123457999999888889999999999888999999999999999999999
Q ss_pred EEccCCCC------CC--CCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceecccc
Q 012587 302 VIRPDLIS------GK--DGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPS 373 (460)
Q Consensus 302 ~~~~~~~~------~~--~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~ 373 (460)
++++.... +. ...+.+|+++.++.++|+++++|+||.+||+|+++++||||||+||++||+++|||||++|+
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~r~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Ea~~~GVP~l~~P~ 388 (481)
T PLN02554 309 SLRRASPNIMKEPPGEFTNLEEILPEGFLDRTKDIGKVIGWAPQVAVLAKPAIGGFVTHCGWNSILESLWFGVPMAAWPL 388 (481)
T ss_pred EEcCCcccccccccccccchhhhCChHHHHHhccCceEEeeCCHHHHhCCcccCcccccCccchHHHHHHcCCCEEecCc
Confidence 99753110 00 00113688998888999999999999999999999999999999999999999999999999
Q ss_pred cccchhhHHHHHhhhceeeeec------------CCcchHHHHHHHHHHHh-HhHHHHHHHHHHHHHHHHHHhhcCCChH
Q 012587 374 FADQQINSRFVGEVWKLGLDIK------------DLCDRNIVEKAVNDLMV-ERKEEFMESADRMANLAKKSVNKGGSSY 440 (460)
Q Consensus 374 ~~DQ~~na~~~~e~~G~g~~~~------------~~~~~~~l~~~i~~~l~-~~~~~~~~~a~~l~~~~~~~~~~~g~~~ 440 (460)
++||+.||+++++++|+|+.+. +.+++++|+++|+++|. + ++||+||+++++.+++++.+||++.
T Consensus 389 ~~DQ~~Na~~~v~~~g~Gv~l~~~~~~~~~~~~~~~~~~e~l~~av~~vm~~~--~~~r~~a~~l~~~~~~av~~gGss~ 466 (481)
T PLN02554 389 YAEQKFNAFEMVEELGLAVEIRKYWRGDLLAGEMETVTAEEIERGIRCLMEQD--SDVRKRVKEMSEKCHVALMDGGSSH 466 (481)
T ss_pred cccchhhHHHHHHHhCceEEeeccccccccccccCeEcHHHHHHHHHHHhcCC--HHHHHHHHHHHHHHHHHhcCCChHH
Confidence 9999999965447899999984 25799999999999996 6 8999999999999999999999999
Q ss_pred HHHHHHHHHHHhh
Q 012587 441 CNLDRLVNDIKMM 453 (460)
Q Consensus 441 ~~~~~~~~~l~~~ 453 (460)
+++++||+++..+
T Consensus 467 ~~l~~lv~~~~~~ 479 (481)
T PLN02554 467 TALKKFIQDVTKN 479 (481)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999999875
|
|
| >PLN02167 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-58 Score=453.28 Aligned_cols=430 Identities=25% Similarity=0.423 Sum_probs=312.8
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCCC---eEEEEeCccchh-----HHhhccccccccccCCCCceEEecCCCCC
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGI---KITFLNTEHYYD-----RVIRHSSDAFSRYMQIPGFQFKTLTDGLP 76 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH---~Vt~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (460)
+..||+++|+|++||++|++.||+.|+.+|. .||+++++.+.. .+..... . .++++|..+|++..
T Consensus 2 ~~~hVv~~PfpaqGHi~P~l~LAk~La~~G~~~t~vt~~~t~~~~~~~~~~~~~~~~~----~---~~~i~~~~lp~~~~ 74 (475)
T PLN02167 2 KEAELIFVPFPSTGHILVTIEFAKRLINLDRRIHTITILYWSLPFAPQADAFLKSLIA----S---EPRIRLVTLPEVQD 74 (475)
T ss_pred CccEEEEeCChhhhhHHHHHHHHHHHHhCCCCeEEEEEEECCCCcchhhhHHHhhccc----C---CCCeEEEECCCCCC
Confidence 4469999999999999999999999999983 567776543221 1111100 0 23599999986542
Q ss_pred CCCCCC-CCChHHHHHHHHhhCcHHHHHHHHcC-----C--C-CccEEEEcCCcchHHHHHHHhCCceEEEecchhHHHH
Q 012587 77 RDHPRT-PDKFPELVDSLNCATPPLLKEMVSDS-----K--S-PVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFW 147 (460)
Q Consensus 77 ~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~-----~--~-~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~ 147 (460)
+...+. .......+..+...+.+.+++.++++ . . ++++||+|.++.|+..+|+++|||++.++++++....
T Consensus 75 p~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~pv~cvV~D~f~~Wa~dVA~elgIP~v~F~t~~A~~~~ 154 (475)
T PLN02167 75 PPPMELFVKASEAYILEFVKKMVPLVRDALSTLVSSRDESDSVRVAGLVLDFFCVPLIDVGNEFNLPSYIFLTCNAGFLG 154 (475)
T ss_pred CccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCeEEEEECCccHHHHHHHHHhCCCEEEEECccHHHHH
Confidence 211000 11111222333333445555555543 1 1 3499999999999999999999999999999988777
Q ss_pred HHhhccccc---cCC----C------CCCC-CCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchh
Q 012587 148 SFHCIPDII---DAG----E------LPIK-GFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGP 213 (460)
Q Consensus 148 ~~~~~~~~~---~~~----~------~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p 213 (460)
.+.+++... ... . .|.. ..++..+++...... .....+........+++.+++|||++||+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~iPgl~~~l~~~dlp~~~~~~----~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~ 230 (475)
T PLN02167 155 MMKYLPERHRKTASEFDLSSGEEELPIPGFVNSVPTKVLPPGLFMK----ESYEAWVEIAERFPEAKGILVNSFTELEPN 230 (475)
T ss_pred HHHHHHHhccccccccccCCCCCeeECCCCCCCCChhhCchhhhCc----chHHHHHHHHHhhcccCEeeeccHHHHHHH
Confidence 665543211 000 0 1110 012333333221111 112233344455577889999999999999
Q ss_pred HHHHHhhcC---CCceeEeCccccccccCCCccccCCCCcc-ccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHH
Q 012587 214 ILSQIRNHS---CPNIYSIGPLNAHLKVRIPEKTYSSSSLW-KIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFY 289 (460)
Q Consensus 214 ~~~~~~~~~---~~~~~~vG~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~ 289 (460)
.++.++. . +|+++.|||+......... ... ..+.++.+||+.++.+++|||||||+...+..++.+++
T Consensus 231 ~~~~l~~-~~~~~p~v~~vGpl~~~~~~~~~-------~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~ela 302 (475)
T PLN02167 231 AFDYFSR-LPENYPPVYPVGPILSLKDRTSP-------NLDSSDRDRIMRWLDDQPESSVVFLCFGSLGSLPAPQIKEIA 302 (475)
T ss_pred HHHHHHh-hcccCCeeEEeccccccccccCC-------CCCcchhHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHH
Confidence 9998865 4 4789999999763221000 111 12356999999888889999999999888999999999
Q ss_pred HHHhhCCCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCcee
Q 012587 290 YGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMI 369 (460)
Q Consensus 290 ~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l 369 (460)
.+++.++.+|||+++.+..........+|+++.++..++.++++|+||.+||+|+++++||||||+||++||+++|||||
T Consensus 303 ~~l~~~~~~flw~~~~~~~~~~~~~~~lp~~~~er~~~rg~v~~w~PQ~~iL~h~~vg~fvtH~G~nS~~Eal~~GvP~l 382 (475)
T PLN02167 303 QALELVGCRFLWSIRTNPAEYASPYEPLPEGFMDRVMGRGLVCGWAPQVEILAHKAIGGFVSHCGWNSVLESLWFGVPIA 382 (475)
T ss_pred HHHHhCCCcEEEEEecCcccccchhhhCChHHHHHhccCeeeeccCCHHHHhcCcccCeEEeeCCcccHHHHHHcCCCEE
Confidence 99999999999999753110000112478899888888888899999999999999999999999999999999999999
Q ss_pred cccccccchhhHHHHHhhhceeeeec-C-------CcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCCChHH
Q 012587 370 CWPSFADQQINSRFVGEVWKLGLDIK-D-------LCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYC 441 (460)
Q Consensus 370 ~~P~~~DQ~~na~~~~e~~G~g~~~~-~-------~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~ 441 (460)
++|+++||+.||+++.+++|+|+.+. . .+++++|+++|+++|.++ ..||+||+++++.+++++.+||++.+
T Consensus 383 ~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~-~~~r~~a~~~~~~~~~av~~gGsS~~ 461 (475)
T PLN02167 383 TWPMYAEQQLNAFTMVKELGLAVELRLDYVSAYGEIVKADEIAGAVRSLMDGE-DVPRKKVKEIAEAARKAVMDGGSSFV 461 (475)
T ss_pred eccccccchhhHHHHHHHhCeeEEeecccccccCCcccHHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHHhCCCcHHH
Confidence 99999999999987547899999885 2 369999999999999741 48999999999999999999999999
Q ss_pred HHHHHHHHHHhhc
Q 012587 442 NLDRLVNDIKMMS 454 (460)
Q Consensus 442 ~~~~~~~~l~~~~ 454 (460)
++++||+.+...+
T Consensus 462 ~l~~~v~~i~~~~ 474 (475)
T PLN02167 462 AVKRFIDDLLGDH 474 (475)
T ss_pred HHHHHHHHHHhcC
Confidence 9999999988653
|
|
| >PLN03004 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-57 Score=445.15 Aligned_cols=419 Identities=28% Similarity=0.501 Sum_probs=310.8
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCC--CeEEEEe--CccchhHHhhccccccccccCCCCceEEecCCCCCCCCC-C
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAG--IKITFLN--TEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHP-R 81 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rG--H~Vt~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 81 (460)
-||+++|+|++||++|++.||+.|+.+| +.||+.. ++.+...+.......... .++++|..+|.+.+.... .
T Consensus 4 ~Hvvl~P~p~qGHi~P~l~LA~~La~~g~~~~vti~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~lp~~~~~~~~~~ 80 (451)
T PLN03004 4 EAIVLYPAPPIGHLVSMVELGKTILSKNPSLSIHIILVPPPYQPESTATYISSVSSS---FPSITFHHLPAVTPYSSSST 80 (451)
T ss_pred cEEEEeCCcccchHHHHHHHHHHHHhCCCceEEEEEEecCcchhhhhhhhhccccCC---CCCeEEEEcCCCCCCCCccc
Confidence 4999999999999999999999999998 5666644 433222222110000001 235899999876532211 1
Q ss_pred CCCChHHHHHHHHhhCcHHHHHHHHcC-C-CCccEEEEcCCcchHHHHHHHhCCceEEEecchhHHHHHHhhccccccC-
Q 012587 82 TPDKFPELVDSLNCATPPLLKEMVSDS-K-SPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDA- 158 (460)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~l~~~~~~~-~-~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~- 158 (460)
...+....+......+.+.+.++++++ . .++++||+|.+..|+..+|+++|||++.++++++.....+.+++.....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~pv~cII~D~~~~Wa~~vA~~lgIP~v~F~t~sA~~~~~~~~~~~~~~~~ 160 (451)
T PLN03004 81 SRHHHESLLLEILCFSNPSVHRTLFSLSRNFNVRAMIIDFFCTAVLDITADFTFPVYFFYTSGAACLAFSFYLPTIDETT 160 (451)
T ss_pred cccCHHHHHHHHHHhhhHHHHHHHHhcCCCCCceEEEECCcchhHHHHHHHhCCCEEEEeCHhHHHHHHHHHHHhccccc
Confidence 112333344344445677778888876 2 2459999999999999999999999999999999888777665421100
Q ss_pred -C---------CCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCC--Cce
Q 012587 159 -G---------ELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSC--PNI 226 (460)
Q Consensus 159 -~---------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~--~~~ 226 (460)
. ..|....++..+++.++.. ........+........+++.+++|||++||+..++.++. .. +++
T Consensus 161 ~~~~~~~~~~v~iPg~p~l~~~dlp~~~~~--~~~~~~~~~~~~~~~~~~~~~vl~NTf~eLE~~~l~~l~~-~~~~~~v 237 (451)
T PLN03004 161 PGKNLKDIPTVHIPGVPPMKGSDMPKAVLE--RDDEVYDVFIMFGKQLSKSSGIIINTFDALENRAIKAITE-ELCFRNI 237 (451)
T ss_pred cccccccCCeecCCCCCCCChHHCchhhcC--CchHHHHHHHHHHHhhcccCeeeeeeHHHhHHHHHHHHHh-cCCCCCE
Confidence 0 0111112455566654432 1122334444444556778899999999999999999876 42 589
Q ss_pred eEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEccC
Q 012587 227 YSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPD 306 (460)
Q Consensus 227 ~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~ 306 (460)
+.|||+...... .+ +.. ..+.++.+|||.+++++||||||||....+.+++++++.+|+.++.+|||+++.+
T Consensus 238 ~~vGPl~~~~~~--~~-----~~~-~~~~~c~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~~FlW~~r~~ 309 (451)
T PLN03004 238 YPIGPLIVNGRI--ED-----RND-NKAVSCLNWLDSQPEKSVVFLCFGSLGLFSKEQVIEIAVGLEKSGQRFLWVVRNP 309 (451)
T ss_pred EEEeeeccCccc--cc-----ccc-chhhHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 999999742110 00 010 1235688999988889999999999999999999999999999999999999843
Q ss_pred CCCCC--CC-CCCCchHHHHHhcC-CceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHH
Q 012587 307 LISGK--DG-ENQIPEELLEATKE-RGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSR 382 (460)
Q Consensus 307 ~~~~~--~~-~~~~~~~~~~~~~~-n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~ 382 (460)
..... .. ...+|++|.++..+ |+++.+|+||.+||+|+++++||||||+||++||+++|||||++|++.||+.||+
T Consensus 310 ~~~~~~~~~~~~~lp~gf~er~~~~g~~v~~W~PQ~~iL~H~~v~~FvTH~G~nS~lEal~~GVP~v~~P~~~DQ~~na~ 389 (451)
T PLN03004 310 PELEKTELDLKSLLPEGFLSRTEDKGMVVKSWAPQVPVLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWPLYAEQRFNRV 389 (451)
T ss_pred ccccccccchhhhCChHHHHhccCCcEEEEeeCCHHHHhCCCccceEeccCcchHHHHHHHcCCCEEeccccccchhhHH
Confidence 11000 01 11378889887654 6667799999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhceeeeec-C---CcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCCChHH
Q 012587 383 FVGEVWKLGLDIK-D---LCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYC 441 (460)
Q Consensus 383 ~~~e~~G~g~~~~-~---~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~ 441 (460)
++++++|+|+.++ . ..++++|+++|+++|.+ ++||++++++++..+.++++||+|.+
T Consensus 390 ~~~~~~g~g~~l~~~~~~~~~~e~l~~av~~vm~~--~~~r~~a~~~~~~a~~Av~~GGSS~~ 450 (451)
T PLN03004 390 MIVDEIKIAISMNESETGFVSSTEVEKRVQEIIGE--CPVRERTMAMKNAAELALTETGSSHT 450 (451)
T ss_pred HHHHHhCceEEecCCcCCccCHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 9975689999996 2 47999999999999998 89999999999999999999999764
|
|
| >PLN00414 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-57 Score=440.12 Aligned_cols=416 Identities=23% Similarity=0.328 Sum_probs=308.4
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEec--C--CCCCCCCCC
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTL--T--DGLPRDHPR 81 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~ 81 (460)
..||+++|+|++||++|++.||+.|+++|++|||++++.+...+...... .+++.|..+ | ++++++..
T Consensus 4 ~~HVvlvPfpaqGHi~PmL~LAk~Las~G~~VT~vtt~~~~~~i~~~~~~-------~~~i~~~~i~lP~~dGLP~g~e- 75 (446)
T PLN00414 4 KFHAFMYPWFGFGHMIPYLHLANKLAEKGHRVTFFLPKKAHKQLQPLNLF-------PDSIVFEPLTLPPVDGLPFGAE- 75 (446)
T ss_pred CCEEEEecCcccchHHHHHHHHHHHHhCCCEEEEEeCCchhhhhcccccC-------CCceEEEEecCCCcCCCCCccc-
Confidence 46999999999999999999999999999999999998776665443210 123666444 3 46665521
Q ss_pred CCCCh----HHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEEEecchhHHHHHHhhcccccc
Q 012587 82 TPDKF----PELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIID 157 (460)
Q Consensus 82 ~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~ 157 (460)
...++ ...+......+.+.++++++.. +||+||+|. +.|+..+|+++|||++.++++++.......+ +....
T Consensus 76 ~~~~l~~~~~~~~~~a~~~l~~~l~~~L~~~--~p~cVV~D~-~~wa~~vA~~lgIP~~~F~~~~a~~~~~~~~-~~~~~ 151 (446)
T PLN00414 76 TASDLPNSTKKPIFDAMDLLRDQIEAKVRAL--KPDLIFFDF-VHWVPEMAKEFGIKSVNYQIISAACVAMVLA-PRAEL 151 (446)
T ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHhcC--CCeEEEECC-chhHHHHHHHhCCCEEEEecHHHHHHHHHhC-cHhhc
Confidence 11122 2223333334556667777665 899999995 7899999999999999999999887766554 11100
Q ss_pred CCCCCCCC----CccCCCC--CCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCC-CceeEeC
Q 012587 158 AGELPIKG----FLRCRDL--PSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSC-PNIYSIG 230 (460)
Q Consensus 158 ~~~~p~~~----~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~-~~~~~vG 230 (460)
....|... .++..+. +.++. .....+.+......+++.+++|||++||+..++.++. .. ++++.||
T Consensus 152 ~~~~pg~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~-~~~~~v~~VG 224 (446)
T PLN00414 152 GFPPPDYPLSKVALRGHDANVCSLFA------NSHELFGLITKGLKNCDVVSIRTCVELEGNLCDFIER-QCQRKVLLTG 224 (446)
T ss_pred CCCCCCCCCCcCcCchhhcccchhhc------ccHHHHHHHHHhhccCCEEEEechHHHHHHHHHHHHH-hcCCCeEEEc
Confidence 00011000 0111111 11111 0112233333445678899999999999999999887 54 5799999
Q ss_pred ccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEccCCCCC
Q 012587 231 PLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISG 310 (460)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~ 310 (460)
|+....... +-...++++.+|||.+++++||||||||....+.+++.+++.+|+..+.+|+|++..+...+
T Consensus 225 Pl~~~~~~~---------~~~~~~~~~~~WLD~q~~~sVvyvsfGS~~~~~~~q~~e~a~gL~~s~~~Flwvvr~~~~~~ 295 (446)
T PLN00414 225 PMLPEPQNK---------SGKPLEDRWNHWLNGFEPGSVVFCAFGTQFFFEKDQFQEFCLGMELTGLPFLIAVMPPKGSS 295 (446)
T ss_pred ccCCCcccc---------cCcccHHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCeEEEEecCCCcc
Confidence 997532110 00012345889999999999999999999999999999999999999999999997532110
Q ss_pred CCCCCCCchHHHHHhcCCceee-eecChHhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHHHHHhhhc
Q 012587 311 KDGENQIPEELLEATKERGCIA-GWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWK 389 (460)
Q Consensus 311 ~~~~~~~~~~~~~~~~~n~~~~-~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G 389 (460)
.....+|++|.++..++.+++ +|+||.+||+|+++++||||||+||++||+++|||||++|++.||+.||+++++++|
T Consensus 296 -~~~~~lp~~f~~r~~~~g~vv~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g 374 (446)
T PLN00414 296 -TVQEALPEGFEERVKGRGIVWEGWVEQPLILSHPSVGCFVNHCGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELE 374 (446)
T ss_pred -cchhhCChhHHHHhcCCCeEEeccCCHHHHhcCCccceEEecCchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhC
Confidence 012258999999888777776 999999999999999999999999999999999999999999999999999976799
Q ss_pred eeeeecC----CcchHHHHHHHHHHHhH---hHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHhhc
Q 012587 390 LGLDIKD----LCDRNIVEKAVNDLMVE---RKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKMMS 454 (460)
Q Consensus 390 ~g~~~~~----~~~~~~l~~~i~~~l~~---~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~~~ 454 (460)
+|+.+.+ .+++++|+++++++|.+ ++.++|++++++++.+.+. ||++ ..+++||+++....
T Consensus 375 ~g~~~~~~~~~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~~~~~~~~---gg~s-s~l~~~v~~~~~~~ 442 (446)
T PLN00414 375 VSVKVQREDSGWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKLKETLVSP---GLLS-GYADKFVEALENEV 442 (446)
T ss_pred eEEEeccccCCccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHcC---CCcH-HHHHHHHHHHHHhc
Confidence 9999952 38999999999999963 3567999999999998664 6644 44899999996653
|
|
| >PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-48 Score=386.98 Aligned_cols=399 Identities=17% Similarity=0.173 Sum_probs=280.5
Q ss_pred CcEEEEE-cCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCC-------C
Q 012587 6 HVHVAIL-PLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLP-------R 77 (460)
Q Consensus 6 ~~~il~~-~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 77 (460)
..||+.+ |.++.+|+.-+-+|+++|++|||+||++++... ...... . ..++....++...+ .
T Consensus 20 ~~kIl~~~P~~~~SH~~~~~~l~~~La~rGH~VTvi~p~~~-~~~~~~-~--------~~~~~~i~~~~~~~~~~~~~~~ 89 (507)
T PHA03392 20 AARILAVFPTPAYSHHSVFKVYVEALAERGHNVTVIKPTLR-VYYASH-L--------CGNITEIDASLSVEYFKKLVKS 89 (507)
T ss_pred cccEEEEcCCCCCcHHHHHHHHHHHHHHcCCeEEEEecccc-cccccC-C--------CCCEEEEEcCCChHHHHHHHhh
Confidence 4689866 778999999999999999999999999976321 111000 0 12344444431000 0
Q ss_pred -CCCCC---CCChHH----HHHHHHhh-----CcHHHHHHHH--cCCCCccEEEEcCCcchHHHHHHHh-CCceEEEecc
Q 012587 78 -DHPRT---PDKFPE----LVDSLNCA-----TPPLLKEMVS--DSKSPVNCIITDGYMSRAIDAAREV-GVSIIYFRTI 141 (460)
Q Consensus 78 -~~~~~---~~~~~~----~~~~~~~~-----~~~~l~~~~~--~~~~~pD~vv~D~~~~~~~~~A~~l-giP~v~~~~~ 141 (460)
..... ..+... ....+... ..+.+.++++ + .++|+||+|.+..|+..+|+++ ++|+|.+++.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~--~kFDlvi~e~~~~c~~~la~~~~~~p~i~~ss~ 167 (507)
T PHA03392 90 SAVFRKRGVVADSSTVTADNYMGLVRMISDQFDLPNVKNLIANKN--NKFDLLVTEAFLDYPLVFSHLFGDAPVIQISSG 167 (507)
T ss_pred hhHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHCCHHHHHHHhcCC--CceeEEEecccchhHHHHHHHhCCCCEEEEcCC
Confidence 00000 000000 01111111 2445567775 4 3799999998888999999999 9999998886
Q ss_pred hhHHHHHHhhcc-ccccCCCCCCCC---------CccCCCCCCcccC-------CCCCChHHHHHH-----HHhhhhcCC
Q 012587 142 SACAFWSFHCIP-DIIDAGELPIKG---------FLRCRDLPSFCRV-------NDPMDPHLLLFA-----RETRLSAHA 199 (460)
Q Consensus 142 ~~~~~~~~~~~~-~~~~~~~~p~~~---------~~~~~~~~~~~~~-------~~~~~~~~~~~~-----~~~~~~~~~ 199 (460)
....... ..++ .+.++.++|... |.|..+....... ....+.+.+... ...+...+.
T Consensus 168 ~~~~~~~-~~~gg~p~~~syvP~~~~~~~~~Msf~~R~~N~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~~~l~~~~ 246 (507)
T PHA03392 168 YGLAENF-ETMGAVSRHPVYYPNLWRSKFGNLNVWETINEIYTELRLYNEFSLLADEQNKLLKQQFGPDTPTIRELRNRV 246 (507)
T ss_pred CCchhHH-HhhccCCCCCeeeCCcccCCCCCCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHcCCCCCCHHHHHhCC
Confidence 5543322 2233 555566666432 2333332110000 001111111110 011334567
Q ss_pred CEEEEcChhhhchhHHHHHhhcCCCceeEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCccc
Q 012587 200 DGLILNTFEDLEGPILSQIRNHSCPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAV 279 (460)
Q Consensus 200 ~~~l~~~~~~le~p~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~ 279 (460)
+.+|+|+.+.+++| ++ .+|++++|||+........ +.++++.+|++.. ++++|||||||...
T Consensus 247 ~l~lvns~~~~d~~-----rp-~~p~v~~vGgi~~~~~~~~-----------~l~~~l~~fl~~~-~~g~V~vS~GS~~~ 308 (507)
T PHA03392 247 QLLFVNVHPVFDNN-----RP-VPPSVQYLGGLHLHKKPPQ-----------PLDDYLEEFLNNS-TNGVVYVSFGSSID 308 (507)
T ss_pred cEEEEecCccccCC-----CC-CCCCeeeecccccCCCCCC-----------CCCHHHHHHHhcC-CCcEEEEECCCCCc
Confidence 79999999988887 77 8899999999986432110 2466789999853 56899999999864
Q ss_pred ---CCHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChh
Q 012587 280 ---MSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWN 356 (460)
Q Consensus 280 ---~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~g 356 (460)
.+.++++.+++++++++.++||+.++. ..+. ..++|+++.+|+||.+||+|+.+++||||||.|
T Consensus 309 ~~~~~~~~~~~~l~a~~~l~~~viw~~~~~---------~~~~----~~p~Nv~i~~w~Pq~~lL~hp~v~~fItHGG~~ 375 (507)
T PHA03392 309 TNDMDNEFLQMLLRTFKKLPYNVLWKYDGE---------VEAI----NLPANVLTQKWFPQRAVLKHKNVKAFVTQGGVQ 375 (507)
T ss_pred CCCCCHHHHHHHHHHHHhCCCeEEEEECCC---------cCcc----cCCCceEEecCCCHHHHhcCCCCCEEEecCCcc
Confidence 467889999999999999999998632 1111 156899999999999999999888999999999
Q ss_pred HHHHHHHhCCceecccccccchhhHHHHHhhhceeeeec-CCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhc
Q 012587 357 STLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNK 435 (460)
Q Consensus 357 s~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~-~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~ 435 (460)
|++||+++|||||++|+.+||+.||+|+ +++|+|+.++ .+++.++|.++|+++|+| ++||+||+++++.+++.
T Consensus 376 s~~Eal~~GvP~v~iP~~~DQ~~Na~rv-~~~G~G~~l~~~~~t~~~l~~ai~~vl~~--~~y~~~a~~ls~~~~~~--- 449 (507)
T PHA03392 376 STDEAIDALVPMVGLPMMGDQFYNTNKY-VELGIGRALDTVTVSAAQLVLAIVDVIEN--PKYRKNLKELRHLIRHQ--- 449 (507)
T ss_pred cHHHHHHcCCCEEECCCCccHHHHHHHH-HHcCcEEEeccCCcCHHHHHHHHHHHhCC--HHHHHHHHHHHHHHHhC---
Confidence 9999999999999999999999999999 4899999998 689999999999999999 99999999999999985
Q ss_pred CCChHHHHHHHHHHHHhhc
Q 012587 436 GGSSYCNLDRLVNDIKMMS 454 (460)
Q Consensus 436 ~g~~~~~~~~~~~~l~~~~ 454 (460)
.-+..+.+...+|.+..+.
T Consensus 450 p~~~~~~av~~iE~v~r~~ 468 (507)
T PHA03392 450 PMTPLHKAIWYTEHVIRNK 468 (507)
T ss_pred CCCHHHHHHHHHHHHHhCC
Confidence 4345667778888877764
|
|
| >PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-49 Score=399.63 Aligned_cols=394 Identities=23% Similarity=0.309 Sum_probs=225.3
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCC-CCCh
Q 012587 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRT-PDKF 86 (460)
Q Consensus 8 ~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 86 (460)
||+++|. +.+|+.++.+|+++|++|||+||++++ .....+... + ...+++..++...+...... ....
T Consensus 2 kvLv~p~-~~SH~~~~~~l~~~L~~rGH~VTvl~~-~~~~~~~~~-~--------~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (500)
T PF00201_consen 2 KVLVFPM-AYSHFIFMRPLAEELAERGHNVTVLTP-SPSSSLNPS-K--------PSNIRFETYPDPYPEEEFEEIFPEF 70 (500)
T ss_dssp -----------SHHHHHHHHHHHHHH-TTSEEEHH-HHHHT---------------S-CCEEEE-----TT------TTH
T ss_pred EEEEeCC-CcCHHHHHHHHHHHHHhcCCceEEEEe-ecccccccc-c--------ccceeeEEEcCCcchHHHhhhhHHH
Confidence 7888885 779999999999999999999999987 322222211 1 22366666655444322111 1111
Q ss_pred --------------HHHHHHH---Hh----hC-----cHHHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEEEec
Q 012587 87 --------------PELVDSL---NC----AT-----PPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFRT 140 (460)
Q Consensus 87 --------------~~~~~~~---~~----~~-----~~~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~ 140 (460)
...+... .. .| ...+.+.+++ .++|++|+|.+..|+..+|+.+++|.+.+.+
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~l~d~~l~~~l~~--~~fDlvI~d~f~~c~~~la~~l~iP~i~~~s 148 (500)
T PF00201_consen 71 ISKFFSESSFANSFWEMFKMLNAFFDFFSKSCEDLLSDPELMEQLKS--EKFDLVISDAFDPCGLALAHYLGIPVIIISS 148 (500)
T ss_dssp HHHHHHHHCCHHHHHHHHHHHHCHHHS----E--EEEETTSTTHHHH--HHHCT-EEEEEESSHHHHHHHHHHTHHHHHH
T ss_pred HHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHh--hccccceEeeccchhHHHHHHhcCCeEEEec
Confidence 0111110 00 01 0111222333 2799999999988999999999999988665
Q ss_pred chhHHHHHHhhccccccCCCCCCCC---------CccCCCCCCccc----------C-CCCCChHHHHHHHHhhhhcCCC
Q 012587 141 ISACAFWSFHCIPDIIDAGELPIKG---------FLRCRDLPSFCR----------V-NDPMDPHLLLFARETRLSAHAD 200 (460)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~p~~~---------~~~~~~~~~~~~----------~-~~~~~~~~~~~~~~~~~~~~~~ 200 (460)
..+.........+.+.+++++|... +.|..+....+. . ......................
T Consensus 149 ~~~~~~~~~~~~g~p~~psyvP~~~s~~~~~msf~~Ri~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (500)
T PF00201_consen 149 STPMYDLSSFSGGVPSPPSYVPSMFSDFSDRMSFWQRIKNFLFYLYFRFIFRYFFSPQDKLYKKYFGFPFSFRELLSNAS 228 (500)
T ss_dssp CCSCSCCTCCTSCCCTSTTSTTCBCCCSGTTSSSST--TTSHHHHHHHHHHHHGGGS-TTS-EEESS-GGGCHHHHHHHH
T ss_pred ccccchhhhhccCCCCChHHhccccccCCCccchhhhhhhhhhhhhhccccccchhhHHHHHhhhcccccccHHHHHHHH
Confidence 4332221111113334455555321 122222210000 0 0000000000000011122344
Q ss_pred EEEEcChhhhchhHHHHHhhcCCCceeEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccC
Q 012587 201 GLILNTFEDLEGPILSQIRNHSCPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVM 280 (460)
Q Consensus 201 ~~l~~~~~~le~p~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~ 280 (460)
.+++|+.+.++.| +| ..|++++||++......+ .++++.+|++..+++++|||||||....
T Consensus 229 l~l~ns~~~ld~p-----rp-~~p~v~~vGgl~~~~~~~-------------l~~~~~~~~~~~~~~~vv~vsfGs~~~~ 289 (500)
T PF00201_consen 229 LVLINSHPSLDFP-----RP-LLPNVVEVGGLHIKPAKP-------------LPEELWNFLDSSGKKGVVYVSFGSIVSS 289 (500)
T ss_dssp HCCSSTEEE---------HH-HHCTSTTGCGC-S----T-------------CHHHHHHHTSTTTTTEEEEEE-TSSSTT
T ss_pred HHhhhccccCcCC-----cc-hhhcccccCccccccccc-------------cccccchhhhccCCCCEEEEecCcccch
Confidence 5666776666555 77 889999999997655432 3566888998646889999999999754
Q ss_pred CH-HHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHH
Q 012587 281 SR-DQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTL 359 (460)
Q Consensus 281 ~~-~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~ 359 (460)
-+ +..+.+++++++++.+|||++.+. .+.. +++|+++++|+||.+||.|+++++||||||+||++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~iW~~~~~----------~~~~----l~~n~~~~~W~PQ~~lL~hp~v~~fitHgG~~s~~ 355 (500)
T PF00201_consen 290 MPEEKLKEIAEAFENLPQRFIWKYEGE----------PPEN----LPKNVLIVKWLPQNDLLAHPRVKLFITHGGLNSTQ 355 (500)
T ss_dssp -HHHHHHHHHHHHHCSTTEEEEEETCS----------HGCH----HHTTEEEESS--HHHHHTSTTEEEEEES--HHHHH
T ss_pred hHHHHHHHHHHHHhhCCCccccccccc----------cccc----ccceEEEeccccchhhhhcccceeeeeccccchhh
Confidence 44 447889999999999999999531 1121 56899999999999999999999999999999999
Q ss_pred HHHHhCCceecccccccchhhHHHHHhhhceeeeec-CCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCCC
Q 012587 360 ESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGS 438 (460)
Q Consensus 360 eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~-~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~ 438 (460)
||+++|||||++|+++||+.||++++ +.|+|+.++ ++++.++|.++|+++|+| ++|++||+++++.+++. .-.
T Consensus 356 Ea~~~gvP~l~~P~~~DQ~~na~~~~-~~G~g~~l~~~~~~~~~l~~ai~~vl~~--~~y~~~a~~ls~~~~~~---p~~ 429 (500)
T PF00201_consen 356 EALYHGVPMLGIPLFGDQPRNAARVE-EKGVGVVLDKNDLTEEELRAAIREVLEN--PSYKENAKRLSSLFRDR---PIS 429 (500)
T ss_dssp HHHHCT--EEE-GCSTTHHHHHHHHH-HTTSEEEEGGGC-SHHHHHHHHHHHHHS--HHHHHHHHHHHHTTT--------
T ss_pred hhhhccCCccCCCCcccCCccceEEE-EEeeEEEEEecCCcHHHHHHHHHHHHhh--hHHHHHHHHHHHHHhcC---CCC
Confidence 99999999999999999999999994 789999998 799999999999999999 99999999999999986 334
Q ss_pred hHHHHHHHHHHHHhh
Q 012587 439 SYCNLDRLVNDIKMM 453 (460)
Q Consensus 439 ~~~~~~~~~~~l~~~ 453 (460)
..+.+...+|.+..+
T Consensus 430 p~~~~~~~ie~v~~~ 444 (500)
T PF00201_consen 430 PLERAVWWIEYVARH 444 (500)
T ss_dssp ---------------
T ss_pred HHHHHHHHHHHHHhc
Confidence 456667777776654
|
This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A .... |
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-43 Score=344.26 Aligned_cols=369 Identities=20% Similarity=0.268 Sum_probs=249.9
Q ss_pred EcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCC---CCCChHH
Q 012587 12 LPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPR---TPDKFPE 88 (460)
Q Consensus 12 ~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 88 (460)
+.+|++||++|+++||++|++|||+|+|++++.+.+.+.+. +++|..++......... ...+...
T Consensus 1 ~~~p~~Ghv~P~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~~------------G~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (392)
T TIGR01426 1 FNIPAHGHVNPTLGVVEELVARGHRVTYATTEEFAERVEAA------------GAEFVLYGSALPPPDNPPENTEEEPID 68 (392)
T ss_pred CCCCccccccccHHHHHHHHhCCCeEEEEeCHHHHHHHHHc------------CCEEEecCCcCccccccccccCcchHH
Confidence 36899999999999999999999999999998877777654 37777777543321100 0023333
Q ss_pred HHHHHHhhCcHH---HHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEEEecchhHHHHHHhhccccccCCCCCCCC
Q 012587 89 LVDSLNCATPPL---LKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELPIKG 165 (460)
Q Consensus 89 ~~~~~~~~~~~~---l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 165 (460)
.+..+....... +.+.+++ .+||+||+|.+++++..+|+.+|||+|.+.+.+... ..++... .|...
T Consensus 69 ~~~~~~~~~~~~~~~l~~~~~~--~~pDlVi~d~~~~~~~~~A~~~giP~v~~~~~~~~~----~~~~~~~----~~~~~ 138 (392)
T TIGR01426 69 IIEKLLDEAEDVLPQLEEAYKG--DRPDLIVYDIASWTGRLLARKWDVPVISSFPTFAAN----EEFEEMV----SPAGE 138 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC--CCCCEEEECCccHHHHHHHHHhCCCEEEEehhhccc----ccccccc----cccch
Confidence 444333322223 3333344 499999999988899999999999999986543211 0111111 01100
Q ss_pred -CccCCCCCCcccCCCCCChHHHH---HHHHhhh---------hcCCCEEEEcChhhhchhHHHHHhhcCCCceeEeCcc
Q 012587 166 -FLRCRDLPSFCRVNDPMDPHLLL---FARETRL---------SAHADGLILNTFEDLEGPILSQIRNHSCPNIYSIGPL 232 (460)
Q Consensus 166 -~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~---------~~~~~~~l~~~~~~le~p~~~~~~~~~~~~~~~vG~~ 232 (460)
+........ . ....+.+. +.+.... .......+....+.|+++ +++..++++++||+
T Consensus 139 ~~~~~~~~~~--~---~~~~~~~~~~~~r~~~gl~~~~~~~~~~~~~~~~l~~~~~~l~~~-----~~~~~~~~~~~Gp~ 208 (392)
T TIGR01426 139 GSAEEGAIAE--R---GLAEYVARLSALLEEHGITTPPVEFLAAPRRDLNLVYTPKAFQPA-----GETFDDSFTFVGPC 208 (392)
T ss_pred hhhhhhcccc--c---hhHHHHHHHHHHHHHhCCCCCCHHHHhcCCcCcEEEeCChHhCCC-----ccccCCCeEEECCC
Confidence 000000000 0 00011111 1111110 011222344444444443 33134679999998
Q ss_pred ccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEccCCCCCCC
Q 012587 233 NAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKD 312 (460)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~ 312 (460)
...... ..+|....+++++||||+||+......+++.+++++++.+.+++|..+.+.
T Consensus 209 ~~~~~~------------------~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~g~~~----- 265 (392)
T TIGR01426 209 IGDRKE------------------DGSWERPGDGRPVVLISLGTVFNNQPSFYRTCVEAFRDLDWHVVLSVGRGV----- 265 (392)
T ss_pred CCCccc------------------cCCCCCCCCCCCEEEEecCccCCCCHHHHHHHHHHHhcCCCeEEEEECCCC-----
Confidence 754221 112665566889999999998766777888899999999999998885321
Q ss_pred CCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHHHHHhhhceee
Q 012587 313 GENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGL 392 (460)
Q Consensus 313 ~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~ 392 (460)
....+ ...++|+.+.+|+||.++|+++++ +|||||.||++||+++|+|+|++|...||..||+++ +++|+|.
T Consensus 266 ----~~~~~-~~~~~~v~~~~~~p~~~ll~~~~~--~I~hgG~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l-~~~g~g~ 337 (392)
T TIGR01426 266 ----DPADL-GELPPNVEVRQWVPQLEILKKADA--FITHGGMNSTMEALFNGVPMVAVPQGADQPMTARRI-AELGLGR 337 (392)
T ss_pred ----ChhHh-ccCCCCeEEeCCCCHHHHHhhCCE--EEECCCchHHHHHHHhCCCEEecCCcccHHHHHHHH-HHCCCEE
Confidence 01111 125679999999999999999997 999999999999999999999999999999999999 5899999
Q ss_pred eec-CCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Q 012587 393 DIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDI 450 (460)
Q Consensus 393 ~~~-~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l 450 (460)
.+. .++++++|.++|+++|+| ++|++++++++++++.. + ... .+.++|+.+
T Consensus 338 ~l~~~~~~~~~l~~ai~~~l~~--~~~~~~~~~l~~~~~~~---~-~~~-~aa~~i~~~ 389 (392)
T TIGR01426 338 HLPPEEVTAEKLREAVLAVLSD--PRYAERLRKMRAEIREA---G-GAR-RAADEIEGF 389 (392)
T ss_pred EeccccCCHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHc---C-CHH-HHHHHHHHh
Confidence 997 688999999999999999 99999999999999985 3 333 445555554
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-43 Score=348.59 Aligned_cols=378 Identities=16% Similarity=0.151 Sum_probs=242.7
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCC--C---
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHP--R--- 81 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--- 81 (460)
|||+|+++|+.||++|+++||++|++|||+|+|++++.+...+.. . +++|.+++........ .
T Consensus 1 mrIl~~~~p~~GHv~P~l~la~~L~~rGh~V~~~t~~~~~~~v~~-~-----------G~~~~~~~~~~~~~~~~~~~~~ 68 (401)
T cd03784 1 MRVLITTIGSRGDVQPLVALAWALRAAGHEVRVATPPEFADLVEA-A-----------GLEFVPVGGDPDELLASPERNA 68 (401)
T ss_pred CeEEEEeCCCcchHHHHHHHHHHHHHCCCeEEEeeCHhHHHHHHH-c-----------CCceeeCCCCHHHHHhhhhhcc
Confidence 699999999999999999999999999999999999766555543 3 3777777653321100 0
Q ss_pred -----CCCChHHHHHHHHhhCcHHHHHHHHcC-CCCccEEEEcCCcchHHHHHHHhCCceEEEecchhHHHHHHhhcccc
Q 012587 82 -----TPDKFPELVDSLNCATPPLLKEMVSDS-KSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDI 155 (460)
Q Consensus 82 -----~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~ 155 (460)
...........+.......++++++.+ ..+||+||+|.+..++..+|+++|||+|.+++.+....... +.+
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDlvi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~---~~~ 145 (401)
T cd03784 69 GLLLLGPGLLLGALRLLRREAEAMLDDLVAAARDWGPDLVVADPLAFAGAVAAEALGIPAVRLLLGPDTPTSAF---PPP 145 (401)
T ss_pred cccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCEEEeCcHHHHHHHHHHHhCCCeEEeecccCCccccC---CCc
Confidence 011112222223322333333444332 24999999999888999999999999999998754321110 000
Q ss_pred ccCCCCCCCCCccCCCCCCccc---CCCCCChHHHHHHHHhhhhc------CCCEEEEcChhhhchhHHHHHhhcCCCce
Q 012587 156 IDAGELPIKGFLRCRDLPSFCR---VNDPMDPHLLLFARETRLSA------HADGLILNTFEDLEGPILSQIRNHSCPNI 226 (460)
Q Consensus 156 ~~~~~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~~~~le~p~~~~~~~~~~~~~ 226 (460)
. .+.. ........ .............+...... .....+....+.+.++ +++..++.
T Consensus 146 ~--------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 211 (401)
T cd03784 146 L--------GRAN-LRLYALLEAELWQDLLGAWLRARRRRLGLPPLSLLDGSDVPELYGFSPAVLPP-----PPDWPRFD 211 (401)
T ss_pred c--------chHH-HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCCcEEEecCcccCCC-----CCCccccC
Confidence 0 0000 00000000 00000001111111111100 0112222222222222 22122455
Q ss_pred eEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCH-HHHHHHHHHHhhCCCcEEEEEcc
Q 012587 227 YSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSR-DQLIEFYYGLVHSKKSFLWVIRP 305 (460)
Q Consensus 227 ~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~-~~~~~~~~al~~~~~~~i~~~~~ 305 (460)
.++|......+.. ...+.++..|++. ++++||||+||+..... .++..++++++..+.++||.++.
T Consensus 212 ~~~g~~~~~~~~~-----------~~~~~~~~~~~~~--~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~~~~~i~~~g~ 278 (401)
T cd03784 212 LVTGYGFRDVPYN-----------GPPPPELWLFLAA--GRPPVYVGFGSMVVRDPEALARLDVEAVATLGQRAILSLGW 278 (401)
T ss_pred cEeCCCCCCCCCC-----------CCCCHHHHHHHhC--CCCcEEEeCCCCcccCHHHHHHHHHHHHHHcCCeEEEEccC
Confidence 6665332211111 0234556778864 68999999999986554 56788899999999999999864
Q ss_pred CCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHHHHH
Q 012587 306 DLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVG 385 (460)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~ 385 (460)
.... . ...++|+++.+|+||.++|+++++ ||||||+||++||+++|||+|++|+..||+.||+++
T Consensus 279 ~~~~--------~----~~~~~~v~~~~~~p~~~ll~~~d~--~I~hgG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~- 343 (401)
T cd03784 279 GGLG--------A----EDLPDNVRVVDFVPHDWLLPRCAA--VVHHGGAGTTAAALRAGVPQLVVPFFGDQPFWAARV- 343 (401)
T ss_pred cccc--------c----cCCCCceEEeCCCCHHHHhhhhhe--eeecCCchhHHHHHHcCCCEEeeCCCCCcHHHHHHH-
Confidence 3111 1 124679999999999999999998 999999999999999999999999999999999999
Q ss_pred hhhceeeeec-CCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHH
Q 012587 386 EVWKLGLDIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVND 449 (460)
Q Consensus 386 e~~G~g~~~~-~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 449 (460)
+++|+|+.+. .+++.++|.++++++|++ .++++++++++++++. +| ...+.++|+.
T Consensus 344 ~~~G~g~~l~~~~~~~~~l~~al~~~l~~---~~~~~~~~~~~~~~~~---~g--~~~~~~~ie~ 400 (401)
T cd03784 344 AELGAGPALDPRELTAERLAAALRRLLDP---PSRRRAAALLRRIREE---DG--VPSAADVIER 400 (401)
T ss_pred HHCCCCCCCCcccCCHHHHHHHHHHHhCH---HHHHHHHHHHHHHHhc---cC--HHHHHHHHhh
Confidence 5899999997 568999999999999985 4666777777777653 33 4455566554
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-43 Score=342.46 Aligned_cols=385 Identities=20% Similarity=0.249 Sum_probs=251.4
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCC-CCCC----CC
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDG-LPRD----HP 80 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~ 80 (460)
+|||+|+..|+.||++|+++||++|.++||+|+|+|++.+.+.+.+. ++.|..++.. .+.. ..
T Consensus 1 ~mkil~~~~~~~Ghv~p~~aL~~eL~~~gheV~~~~~~~~~~~ve~a------------g~~f~~~~~~~~~~~~~~~~~ 68 (406)
T COG1819 1 RMKILFVVCGAYGHVNPCLALGKELRRRGHEVVFASTGKFKEFVEAA------------GLAFVAYPIRDSELATEDGKF 68 (406)
T ss_pred CceEEEEeccccccccchHHHHHHHHhcCCeEEEEeCHHHHHHHHHh------------CcceeeccccCChhhhhhhhh
Confidence 58999999999999999999999999999999999998888888765 2555555532 1111 11
Q ss_pred CCCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEEEecchhHHHHHHh-hccccccCC
Q 012587 81 RTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFH-CIPDIIDAG 159 (460)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~-~~~~~~~~~ 159 (460)
...+.+......+. .....+.+++.+. .||+|+.|...+.+ .+++..++|++.............. .++.....+
T Consensus 69 ~~~~~~~~~~~~~~-~~~~~~~~~~~e~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (406)
T COG1819 69 AGVKSFRRLLQQFK-KLIRELLELLREL--EPDLVVDDARLSLG-LAARLLGIPVVGINVAPYTPLPAAGLPLPPVGIAG 144 (406)
T ss_pred hccchhHHHhhhhh-hhhHHHHHHHHhc--chhhhhcchhhhhh-hhhhhcccchhhhhhhhccCCcccccCcccccccc
Confidence 11222222222222 2344455666665 99999999776655 8899999999887665443322211 111111111
Q ss_pred CCCCCCCccCCCCCCcccC-CCCCCh-HHHHHHHHhhhhc-C--CCEEEEcChhhhchhHHHHH----hhcCCCceeEeC
Q 012587 160 ELPIKGFLRCRDLPSFCRV-NDPMDP-HLLLFARETRLSA-H--ADGLILNTFEDLEGPILSQI----RNHSCPNIYSIG 230 (460)
Q Consensus 160 ~~p~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~-~--~~~~l~~~~~~le~p~~~~~----~~~~~~~~~~vG 230 (460)
..+. +...++..... ...... ......+...... . ....++.+-+.++....+.. +. .+....++|
T Consensus 145 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~ 219 (406)
T COG1819 145 KLPI----PLYPLPPRLVRPLIFARSWLPKLVVRRNLGLELGLPNIRRLFASGPLLEIAYTDVLFPPGDR-LPFIGPYIG 219 (406)
T ss_pred cccc----cccccChhhccccccchhhhhhhhhhhhccccccccchHHHhcCCCCccccccccccCCCCC-CCCCcCccc
Confidence 1110 00001000000 000000 0000000000000 0 00001111111111111100 11 122344555
Q ss_pred ccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEccCCCCC
Q 012587 231 PLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISG 310 (460)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~ 310 (460)
|+..... .++..|. ..++++||+|+||.... .++++.+.+++..+++++|+..+..
T Consensus 220 ~~~~~~~-----------------~~~~~~~--~~d~~~vyvslGt~~~~-~~l~~~~~~a~~~l~~~vi~~~~~~---- 275 (406)
T COG1819 220 PLLGEAA-----------------NELPYWI--PADRPIVYVSLGTVGNA-VELLAIVLEALADLDVRVIVSLGGA---- 275 (406)
T ss_pred ccccccc-----------------ccCcchh--cCCCCeEEEEcCCcccH-HHHHHHHHHHHhcCCcEEEEecccc----
Confidence 5554333 2233343 33799999999999876 8899999999999999999998531
Q ss_pred CCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHHHHHhhhce
Q 012587 311 KDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKL 390 (460)
Q Consensus 311 ~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~ 390 (460)
. ....+ .++|+++.+|+||.++|+++++ ||||||+|||+|||++|||+|++|...||+.||.|+ |++|+
T Consensus 276 --~-~~~~~-----~p~n~~v~~~~p~~~~l~~ad~--vI~hGG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rv-e~~G~ 344 (406)
T COG1819 276 --R-DTLVN-----VPDNVIVADYVPQLELLPRADA--VIHHGGAGTTSEALYAGVPLVVIPDGADQPLNAERV-EELGA 344 (406)
T ss_pred --c-ccccc-----CCCceEEecCCCHHHHhhhcCE--EEecCCcchHHHHHHcCCCEEEecCCcchhHHHHHH-HHcCC
Confidence 0 01122 6789999999999999999998 999999999999999999999999999999999999 68999
Q ss_pred eeeec-CCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHhh
Q 012587 391 GLDIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKMM 453 (460)
Q Consensus 391 g~~~~-~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~~ 453 (460)
|..+. ..++.+.|+++|+++|.| +.|+++++++++.+++. +| .+.+.++++++...
T Consensus 345 G~~l~~~~l~~~~l~~av~~vL~~--~~~~~~~~~~~~~~~~~---~g--~~~~a~~le~~~~~ 401 (406)
T COG1819 345 GIALPFEELTEERLRAAVNEVLAD--DSYRRAAERLAEEFKEE---DG--PAKAADLLEEFARE 401 (406)
T ss_pred ceecCcccCCHHHHHHHHHHHhcC--HHHHHHHHHHHHHhhhc---cc--HHHHHHHHHHHHhc
Confidence 99998 699999999999999999 99999999999999997 55 56667788776554
|
|
| >KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-38 Score=319.63 Aligned_cols=413 Identities=27% Similarity=0.378 Sum_probs=249.7
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCCCCC
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPDK 85 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (460)
..+++++++|++||++|++.+|+.|+++||+||++++..................+....+.+...+++++.........
T Consensus 5 ~~~~il~~~p~~sH~~~~~~la~~L~~~gh~vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (496)
T KOG1192|consen 5 KAHNILVPFPGQSHLNPMLQLAKRLAERGHNVTVVTPSFNALKLSKSSKSKSIKKINPPPFEFLTIPDGLPEGWEDDDLD 84 (496)
T ss_pred cceeEEEECCcccHHHHHHHHHHHHHHcCCceEEEEeechhcccCCcccceeeeeeecChHHhhhhhhhhccchHHHHHH
Confidence 35788889999999999999999999999999999986654443321100000000000111111111222221000001
Q ss_pred hHHHHHHHHhhCcHHHHHHHHcC----CCCccEEEEcCCcchHHHHHHHhC-CceEEEecchhHHHHHHhhccccccCCC
Q 012587 86 FPELVDSLNCATPPLLKEMVSDS----KSPVNCIITDGYMSRAIDAAREVG-VSIIYFRTISACAFWSFHCIPDIIDAGE 160 (460)
Q Consensus 86 ~~~~~~~~~~~~~~~l~~~~~~~----~~~pD~vv~D~~~~~~~~~A~~lg-iP~v~~~~~~~~~~~~~~~~~~~~~~~~ 160 (460)
.......+...+...+++..... ..++|++|+|.+..+...+|...+ |+...+.+........... .+..+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~~----~~~~~ 160 (496)
T KOG1192|consen 85 ISESLLELNKTCEDLLRDPLEKLLLLKSEKFDLIISDPFLGLFLLLAIPSFVIPLLSFPTSSAVLLALGLP----SPLSY 160 (496)
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHhhcCCccEEEechhhHHHHHhcccceEEEeecccCchHHHHhcCCc----Ccccc
Confidence 11112223323333333322222 224999999998666666666664 8887777766655443221 11112
Q ss_pred CCCCC----------CccCCCCC-----CcccCCCC---CChHHHHH--------HHHhhhhcCCCEEEEcChhhhchhH
Q 012587 161 LPIKG----------FLRCRDLP-----SFCRVNDP---MDPHLLLF--------ARETRLSAHADGLILNTFEDLEGPI 214 (460)
Q Consensus 161 ~p~~~----------~~~~~~~~-----~~~~~~~~---~~~~~~~~--------~~~~~~~~~~~~~l~~~~~~le~p~ 214 (460)
.|... +.+..++. ........ ........ ........+....++|+.+.++.+
T Consensus 161 ~p~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ln~~~~~~~~- 239 (496)
T KOG1192|consen 161 VPSPFSLSSGDDMSFPERVPNLIKKDLPSFLFSLSDDRKQDKISKELLGDILNWKPTASGIIVNASFIFLNSNPLLDFE- 239 (496)
T ss_pred cCcccCccccccCcHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCCcccccccHHHhhhcCeEEEEccCcccCCC-
Confidence 22210 00000000 00000000 00000000 000122233445666665544441
Q ss_pred HHHHhhcCCCceeEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCC--cEEEEEecCcc---cCCHHHHHHHH
Q 012587 215 LSQIRNHSCPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQ--SVIYVSFGSIA---VMSRDQLIEFY 289 (460)
Q Consensus 215 ~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~--~~V~vs~GS~~---~~~~~~~~~~~ 289 (460)
.++ ..++++.|||+........ .....+|++..+.. ++|||||||+. ..+......++
T Consensus 240 ---~~~-~~~~v~~IG~l~~~~~~~~-------------~~~~~~wl~~~~~~~~~vvyvSfGS~~~~~~lp~~~~~~l~ 302 (496)
T KOG1192|consen 240 ---PRP-LLPKVIPIGPLHVKDSKQK-------------SPLPLEWLDILDESRHSVVYISFGSMVNSADLPEEQKKELA 302 (496)
T ss_pred ---CCC-CCCCceEECcEEecCcccc-------------ccccHHHHHHHhhccCCeEEEECCcccccccCCHHHHHHHH
Confidence 133 4589999999997633211 11345677765554 99999999998 78899999999
Q ss_pred HHHhhC-CCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhh-hcccccccccccCChhHHHHHHHhCCc
Q 012587 290 YGLVHS-KKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEV-LAHSAVGGFLTHCGWNSTLESIVAGMP 367 (460)
Q Consensus 290 ~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~i-l~~~~~~~~I~HGG~gs~~eal~~GvP 367 (460)
.+++.+ ++.|||+....... .+++++.++.++|+...+|+||.++ |+|+++++||||||+|||+|++++|||
T Consensus 303 ~~l~~~~~~~FiW~~~~~~~~------~~~~~~~~~~~~nV~~~~W~PQ~~lll~H~~v~~FvTHgG~nSt~E~~~~GvP 376 (496)
T KOG1192|consen 303 KALESLQGVTFLWKYRPDDSI------YFPEGLPNRGRGNVVLSKWAPQNDLLLDHPAVGGFVTHGGWNSTLESIYSGVP 376 (496)
T ss_pred HHHHhCCCceEEEEecCCcch------hhhhcCCCCCcCceEEecCCCcHHHhcCCCcCcEEEECCcccHHHHHHhcCCc
Confidence 999999 88899999743110 1222221112357888899999998 599999999999999999999999999
Q ss_pred eecccccccchhhHHHHHhhhceeeeecCCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHH
Q 012587 368 MICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLV 447 (460)
Q Consensus 368 ~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~ 447 (460)
||++|+++||+.||++++++.++++....+.+...+.+++.+++++ ++|+++++++++.+++. .... +.+...+
T Consensus 377 ~v~~Plf~DQ~~Na~~i~~~g~~~v~~~~~~~~~~~~~~~~~il~~--~~y~~~~~~l~~~~~~~---p~~~-~~~~~~~ 450 (496)
T KOG1192|consen 377 MVCVPLFGDQPLNARLLVRHGGGGVLDKRDLVSEELLEAIKEILEN--EEYKEAAKRLSEILRDQ---PISP-ELAVKWV 450 (496)
T ss_pred eecCCccccchhHHHHHHhCCCEEEEehhhcCcHHHHHHHHHHHcC--hHHHHHHHHHHHHHHcC---CCCH-HHHHHHH
Confidence 9999999999999999975544444444566666699999999999 99999999999998864 4444 4445444
Q ss_pred HHHHh
Q 012587 448 NDIKM 452 (460)
Q Consensus 448 ~~l~~ 452 (460)
|....
T Consensus 451 e~~~~ 455 (496)
T KOG1192|consen 451 EFVAR 455 (496)
T ss_pred HHHHh
Confidence 54443
|
|
| >PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.4e-27 Score=224.01 Aligned_cols=317 Identities=15% Similarity=0.149 Sum_probs=202.7
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchh-HHhhccccccccccCCCCceEEecCC-CCCCCCCCCC
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYD-RVIRHSSDAFSRYMQIPGFQFKTLTD-GLPRDHPRTP 83 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 83 (460)
|.||+|.+.|+.||++|.++||++|.++||+|+|+++....+ .+... .++.+..++. ++.. .
T Consensus 1 ~~~i~~~~GGTGGHi~Pala~a~~l~~~g~~v~~vg~~~~~e~~l~~~-----------~g~~~~~~~~~~l~~-----~ 64 (352)
T PRK12446 1 MKKIVFTGGGSAGHVTPNLAIIPYLKEDNWDISYIGSHQGIEKTIIEK-----------ENIPYYSISSGKLRR-----Y 64 (352)
T ss_pred CCeEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEECCCccccccCcc-----------cCCcEEEEeccCcCC-----C
Confidence 458999999999999999999999999999999999755433 22111 1366666652 1111 1
Q ss_pred CChHHHHHHHHhh--CcHHHHHHHHcCCCCccEEEEcCCcc--hHHHHHHHhCCceEEEecchhHHHHHHhhccccccCC
Q 012587 84 DKFPELVDSLNCA--TPPLLKEMVSDSKSPVNCIITDGYMS--RAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAG 159 (460)
Q Consensus 84 ~~~~~~~~~~~~~--~~~~l~~~~~~~~~~pD~vv~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 159 (460)
..+ ..+...... ..-....++++. +||+|++...+. .+..+|..+|+|++...........
T Consensus 65 ~~~-~~~~~~~~~~~~~~~~~~i~~~~--kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~n~~~g~~------------ 129 (352)
T PRK12446 65 FDL-KNIKDPFLVMKGVMDAYVRIRKL--KPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESDMTPGLA------------ 129 (352)
T ss_pred chH-HHHHHHHHHHHHHHHHHHHHHhc--CCCEEEecCchhhHHHHHHHHHcCCCEEEECCCCCccHH------------
Confidence 111 112221111 122334567776 999999876544 4789999999999886554211100
Q ss_pred CCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCC--CceeEeCccccccc
Q 012587 160 ELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSC--PNIYSIGPLNAHLK 237 (460)
Q Consensus 160 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~--~~~~~vG~~~~~~~ 237 (460)
.+.+. +..+. ++.+|++. .. .+ .+++++|+...+.-
T Consensus 130 --------------------------nr~~~------~~a~~-v~~~f~~~--------~~-~~~~~k~~~tG~Pvr~~~ 167 (352)
T PRK12446 130 --------------------------NKIAL------RFASK-IFVTFEEA--------AK-HLPKEKVIYTGSPVREEV 167 (352)
T ss_pred --------------------------HHHHH------HhhCE-EEEEccch--------hh-hCCCCCeEEECCcCCccc
Confidence 01111 22222 23444321 11 22 35789997765432
Q ss_pred cCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHH-HHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCC
Q 012587 238 VRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRD-QLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQ 316 (460)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~-~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~ 316 (460)
... ..+...+.+...+++++|+|..||......+ .+..++..+. .+.+++|.++.+ .
T Consensus 168 ~~~------------~~~~~~~~~~l~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~-~~~~vv~~~G~~---------~ 225 (352)
T PRK12446 168 LKG------------NREKGLAFLGFSRKKPVITIMGGSLGAKKINETVREALPELL-LKYQIVHLCGKG---------N 225 (352)
T ss_pred ccc------------cchHHHHhcCCCCCCcEEEEECCccchHHHHHHHHHHHHhhc-cCcEEEEEeCCc---------h
Confidence 110 1111222222234689999999999865543 2333444443 247888888532 1
Q ss_pred CchHHHHHhcCCceeeeec-C-hHhhhcccccccccccCChhHHHHHHHhCCceeccccc-----ccchhhHHHHHhhhc
Q 012587 317 IPEELLEATKERGCIAGWV-P-QEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSF-----ADQQINSRFVGEVWK 389 (460)
Q Consensus 317 ~~~~~~~~~~~n~~~~~~v-p-~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~-----~DQ~~na~~~~e~~G 389 (460)
+.... +. .+++.+.+|+ + ..++|+.+++ +|||||.+|++|++++|+|+|++|+. .||..||+.++ +.|
T Consensus 226 ~~~~~-~~-~~~~~~~~f~~~~m~~~~~~adl--vIsr~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~-~~g 300 (352)
T PRK12446 226 LDDSL-QN-KEGYRQFEYVHGELPDILAITDF--VISRAGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFE-RQG 300 (352)
T ss_pred HHHHH-hh-cCCcEEecchhhhHHHHHHhCCE--EEECCChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHH-HCC
Confidence 11111 11 1355666887 4 5789999997 99999999999999999999999974 48999999995 789
Q ss_pred eeeeec-CCcchHHHHHHHHHHHhHhHH-HHHHHHHH
Q 012587 390 LGLDIK-DLCDRNIVEKAVNDLMVERKE-EFMESADR 424 (460)
Q Consensus 390 ~g~~~~-~~~~~~~l~~~i~~~l~~~~~-~~~~~a~~ 424 (460)
+|..+. ++++++.|.+++.++++| + .+++++++
T Consensus 301 ~~~~l~~~~~~~~~l~~~l~~ll~~--~~~~~~~~~~ 335 (352)
T PRK12446 301 YASVLYEEDVTVNSLIKHVEELSHN--NEKYKTALKK 335 (352)
T ss_pred CEEEcchhcCCHHHHHHHHHHHHcC--HHHHHHHHHH
Confidence 999997 789999999999999986 4 45554444
|
|
| >PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.4e-26 Score=220.00 Aligned_cols=303 Identities=16% Similarity=0.170 Sum_probs=191.2
Q ss_pred cEEEEEcCC-CCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCCCCC
Q 012587 7 VHVAILPLP-AVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPDK 85 (460)
Q Consensus 7 ~~il~~~~~-~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (460)
|||+|.+.+ +.||+.++++|+++| |||+|+|++.....+.+.+. +....++.............
T Consensus 1 MkIl~~v~~~G~GH~~R~~~la~~L--rg~~v~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~ 65 (318)
T PF13528_consen 1 MKILFYVQGHGLGHASRCLALARAL--RGHEVTFITSGPAPEFLKPR-------------FPVREIPGLGPIQENGRLDR 65 (318)
T ss_pred CEEEEEeCCCCcCHHHHHHHHHHHH--ccCceEEEEcCCcHHHhccc-------------cCEEEccCceEeccCCccch
Confidence 699999887 999999999999999 69999999986554444332 33333332111111101111
Q ss_pred hHHHHHHH-----HhhCcHHHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEEEecchhHHHHHHhhccccccCCC
Q 012587 86 FPELVDSL-----NCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGE 160 (460)
Q Consensus 86 ~~~~~~~~-----~~~~~~~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~ 160 (460)
........ .......+.+.+++. +||+||+|. .+.+..+|+..|||++.+.......... . ..
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~pDlVIsD~-~~~~~~aa~~~giP~i~i~~~~~~~~~~-~--~~------ 133 (318)
T PF13528_consen 66 WKTVRNNIRWLARLARRIRREIRWLREF--RPDLVISDF-YPLAALAARRAGIPVIVISNQYWFLHPN-F--WL------ 133 (318)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCCEEEEcC-hHHHHHHHHhcCCCEEEEEehHHccccc-C--Cc------
Confidence 11111111 111223334455554 999999995 4557788999999999988764322100 0 00
Q ss_pred CCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhh--hcCCCEEEEcChhhhchhHHHHHhhcCCCceeEeCcccccccc
Q 012587 161 LPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRL--SAHADGLILNTFEDLEGPILSQIRNHSCPNIYSIGPLNAHLKV 238 (460)
Q Consensus 161 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~le~p~~~~~~~~~~~~~~~vG~~~~~~~~ 238 (460)
. ..........+.... .......+..+++ .+ .. ...+..++||+......
T Consensus 134 ----------------~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~-----~~-~~~~~~~~~p~~~~~~~ 185 (318)
T PF13528_consen 134 ----------------P---WDQDFGRLIERYIDRYHFPPADRRLALSFY---PP-----LP-PFFRVPFVGPIIRPEIR 185 (318)
T ss_pred ----------------c---hhhhHHHHHHHhhhhccCCcccceecCCcc---cc-----cc-ccccccccCchhccccc
Confidence 0 001111111111111 2333334434432 11 11 22346678877754331
Q ss_pred CCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCC-CcEEEEEccCCCCCCCCCCCC
Q 012587 239 RIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSK-KSFLWVIRPDLISGKDGENQI 317 (460)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~-~~~i~~~~~~~~~~~~~~~~~ 317 (460)
. .. ..+++.|+|++|..... .++++++..+ +++++. +...
T Consensus 186 ~--------------------~~--~~~~~~iLv~~gg~~~~------~~~~~l~~~~~~~~~v~-g~~~---------- 226 (318)
T PF13528_consen 186 E--------------------LP--PEDEPKILVYFGGGGPG------DLIEALKALPDYQFIVF-GPNA---------- 226 (318)
T ss_pred c--------------------cC--CCCCCEEEEEeCCCcHH------HHHHHHHhCCCCeEEEE-cCCc----------
Confidence 1 11 12567799999987543 5667777766 566655 3220
Q ss_pred chHHHHHhcCCceeeeec--ChHhhhcccccccccccCChhHHHHHHHhCCceecccc--cccchhhHHHHHhhhceeee
Q 012587 318 PEELLEATKERGCIAGWV--PQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPS--FADQQINSRFVGEVWKLGLD 393 (460)
Q Consensus 318 ~~~~~~~~~~n~~~~~~v--p~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~--~~DQ~~na~~~~e~~G~g~~ 393 (460)
. +...+|+.+.+|. ...++|+.|++ +|+|||.||++||+++|+|+|++|. ..||..||+++ +++|+|..
T Consensus 227 ~----~~~~~ni~~~~~~~~~~~~~m~~ad~--vIs~~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l-~~~G~~~~ 299 (318)
T PF13528_consen 227 A----DPRPGNIHVRPFSTPDFAELMAAADL--VISKGGYTTISEALALGKPALVIPRPGQDEQEYNARKL-EELGLGIV 299 (318)
T ss_pred c----cccCCCEEEeecChHHHHHHHHhCCE--EEECCCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHH-HHCCCeEE
Confidence 0 1135799998876 46889999997 9999999999999999999999999 67999999999 68999999
Q ss_pred ec-CCcchHHHHHHHHHH
Q 012587 394 IK-DLCDRNIVEKAVNDL 410 (460)
Q Consensus 394 ~~-~~~~~~~l~~~i~~~ 410 (460)
+. ++++++.|+++|+++
T Consensus 300 ~~~~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 300 LSQEDLTPERLAEFLERL 317 (318)
T ss_pred cccccCCHHHHHHHHhcC
Confidence 98 799999999999875
|
|
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.4e-22 Score=190.70 Aligned_cols=324 Identities=19% Similarity=0.213 Sum_probs=202.7
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCC-eEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCCCCC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGI-KITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPDK 85 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH-~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (460)
++|++...++-||++|.++|+++|.++|+ +|.++.+....+..... ..++.++.++.+...... ....
T Consensus 1 ~~ivl~~gGTGGHv~pAlAl~~~l~~~g~~~v~~~~~~~~~e~~l~~----------~~~~~~~~I~~~~~~~~~-~~~~ 69 (357)
T COG0707 1 KKIVLTAGGTGGHVFPALALAEELAKRGWEQVIVLGTGDGLEAFLVK----------QYGIEFELIPSGGLRRKG-SLKL 69 (357)
T ss_pred CeEEEEeCCCccchhHHHHHHHHHHhhCccEEEEecccccceeeecc----------ccCceEEEEecccccccC-cHHH
Confidence 48999999999999999999999999999 58887664444432221 224777777653333221 1111
Q ss_pred hHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcc--hHHHHHHHhCCceEEEecchhHHHHHHhhccccccCCCCCC
Q 012587 86 FPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS--RAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELPI 163 (460)
Q Consensus 86 ~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~ 163 (460)
....+..+. ...+.+.++++. +||+|+.-..+. .+..+|..+|||++.+.........
T Consensus 70 ~~~~~~~~~--~~~~a~~il~~~--kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEqn~~~G~a---------------- 129 (357)
T COG0707 70 LKAPFKLLK--GVLQARKILKKL--KPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQNAVPGLA---------------- 129 (357)
T ss_pred HHHHHHHHH--HHHHHHHHHHHc--CCCEEEecCCccccHHHHHHHhCCCCEEEEecCCCcchh----------------
Confidence 222222222 335568888887 999999855544 6888999999999997664221100
Q ss_pred CCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCCCceeEeCccccc-cccCCCc
Q 012587 164 KGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPNIYSIGPLNAH-LKVRIPE 242 (460)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~~~~~~vG~~~~~-~~~~~~~ 242 (460)
.+... ...+ .+..+|+..+.. . ...+++.+|-.... ... .+
T Consensus 130 ----------------------nk~~~------~~a~-~V~~~f~~~~~~----~---~~~~~~~tG~Pvr~~~~~-~~- 171 (357)
T COG0707 130 ----------------------NKILS------KFAK-KVASAFPKLEAG----V---KPENVVVTGIPVRPEFEE-LP- 171 (357)
T ss_pred ----------------------HHHhH------Hhhc-eeeecccccccc----C---CCCceEEecCcccHHhhc-cc-
Confidence 01111 1111 223333321100 0 11357888844332 221 10
Q ss_pred cccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHH-HHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHH
Q 012587 243 KTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRD-QLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEEL 321 (460)
Q Consensus 243 ~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~-~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 321 (460)
.. ...+ +...++++|+|.-||++...-+ .+..+...+.+ +..+++.++.+ .+ ...
T Consensus 172 -----------~~-~~~~-~~~~~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~-~~~v~~~~G~~---------~~-~~~ 227 (357)
T COG0707 172 -----------AA-EVRK-DGRLDKKTILVTGGSQGAKALNDLVPEALAKLAN-RIQVIHQTGKN---------DL-EEL 227 (357)
T ss_pred -----------hh-hhhh-hccCCCcEEEEECCcchhHHHHHHHHHHHHHhhh-CeEEEEEcCcc---------hH-HHH
Confidence 00 0111 1122689999999999754332 22223333332 46777777432 11 111
Q ss_pred HHH-hcCC-ceeeeecCh-HhhhcccccccccccCChhHHHHHHHhCCceeccccc----ccchhhHHHHHhhhceeeee
Q 012587 322 LEA-TKER-GCIAGWVPQ-EEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSF----ADQQINSRFVGEVWKLGLDI 394 (460)
Q Consensus 322 ~~~-~~~n-~~~~~~vp~-~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~----~DQ~~na~~~~e~~G~g~~~ 394 (460)
... ...+ +.+.+|+.+ ..+++.+++ +||++|.+|+.|++++|+|++.+|.- .||..||+.+ ++.|.|..+
T Consensus 228 ~~~~~~~~~~~v~~f~~dm~~~~~~ADL--vIsRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l-~~~gaa~~i 304 (357)
T COG0707 228 KSAYNELGVVRVLPFIDDMAALLAAADL--VISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFL-EKAGAALVI 304 (357)
T ss_pred HHHHhhcCcEEEeeHHhhHHHHHHhccE--EEeCCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHH-HhCCCEEEe
Confidence 111 1123 667799885 788888887 99999999999999999999999973 3899999999 588999999
Q ss_pred c-CCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHH
Q 012587 395 K-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKK 431 (460)
Q Consensus 395 ~-~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~ 431 (460)
+ .++|.+.|.+.|.+++++ .++.++|++..++
T Consensus 305 ~~~~lt~~~l~~~i~~l~~~-----~~~l~~m~~~a~~ 337 (357)
T COG0707 305 RQSELTPEKLAELILRLLSN-----PEKLKAMAENAKK 337 (357)
T ss_pred ccccCCHHHHHHHHHHHhcC-----HHHHHHHHHHHHh
Confidence 8 689999999999999985 3445555555555
|
|
| >TIGR00661 MJ1255 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.8e-23 Score=197.47 Aligned_cols=308 Identities=14% Similarity=0.161 Sum_probs=172.7
Q ss_pred EEEEEcCCC-CCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccc-cccccccCCCCceEEecCCCCCCCCCCCCCC
Q 012587 8 HVAILPLPA-VGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSS-DAFSRYMQIPGFQFKTLTDGLPRDHPRTPDK 85 (460)
Q Consensus 8 ~il~~~~~~-~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (460)
||+|...+. .||+.|.++|+++|.+ ||+|+|+++.. ...+.+..+ ..+.. .+++.+.. ..+. .+
T Consensus 1 ril~~~~g~G~GH~~r~~ala~~L~~-g~ev~~~~~~~-~~~~~~~~~~~~~~~---~p~~~~~~-----~~~~----~~ 66 (321)
T TIGR00661 1 KILYSVCGEGFGHTTRSVAIGEALKN-DYEVSYIASGR-SKNYISKYGFKVFET---FPGIKLKG-----EDGK----VN 66 (321)
T ss_pred CEEEEEeccCccHHHHHHHHHHHHhC-CCeEEEEEcCC-HHHhhhhhcCcceec---cCCceEee-----cCCc----Cc
Confidence 688877774 4999999999999999 99999999866 444433323 10111 11112110 0110 11
Q ss_pred hHHHHH---HHHhhCcHHHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEEEecchhHHHHHHhhccccccCCCCC
Q 012587 86 FPELVD---SLNCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELP 162 (460)
Q Consensus 86 ~~~~~~---~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p 162 (460)
....+. .+.........++++++ +||+||+| +.+.+..+|..+|||++.+..+... .++..
T Consensus 67 ~~~~l~~~~~~~~~~~~~~~~~l~~~--~pDlVi~d-~~~~~~~aA~~~~iP~i~i~~q~~~------~~~~~------- 130 (321)
T TIGR00661 67 IVKTLRNKEYSPKKAIRREINIIREY--NPDLIISD-FEYSTVVAAKLLKIPVICISNQNYT------RYPLK------- 130 (321)
T ss_pred HHHHHHhhccccHHHHHHHHHHHHhc--CCCEEEEC-CchHHHHHHHhcCCCEEEEecchhh------cCCcc-------
Confidence 111111 11011223345666776 99999999 5566788999999999987763211 11110
Q ss_pred CCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCCCceeEeCccccccccCCCc
Q 012587 163 IKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPNIYSIGPLNAHLKVRIPE 242 (460)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~~~~~~vG~~~~~~~~~~~~ 242 (460)
. +............+ ....+......++... . ..|.+. +.. ..+
T Consensus 131 -------------~---~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~--------~-~~p~~~--~~~----~~~--- 174 (321)
T TIGR00661 131 -------------T---DLIVYPTMAALRIF--NERCERFIVPDYPFPY--------T-ICPKII--KNM----EGP--- 174 (321)
T ss_pred -------------c---chhHHHHHHHHHHh--ccccceEeeecCCCCC--------C-CCcccc--ccC----CCc---
Confidence 0 00000111111111 1222222223222110 0 111110 000 000
Q ss_pred cccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHH
Q 012587 243 KTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELL 322 (460)
Q Consensus 243 ~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 322 (460)
....++.+|.. .+++.|+|.+|+... +.+++++++.+. +.+.+.... ....
T Consensus 175 ---------~~~~~~~~~~~--~~~~~iLv~~g~~~~------~~l~~~l~~~~~-~~~i~~~~~--------~~~~--- 225 (321)
T TIGR00661 175 ---------LIRYDVDDVDN--YGEDYILVYIGFEYR------YKILELLGKIAN-VKFVCYSYE--------VAKN--- 225 (321)
T ss_pred ---------ccchhhhcccc--CCCCcEEEECCcCCH------HHHHHHHHhCCC-eEEEEeCCC--------CCcc---
Confidence 00111222322 245778888887542 345677776653 223322110 1111
Q ss_pred HHhcCCceeeeecC--hHhhhcccccccccccCChhHHHHHHHhCCceecccccc--cchhhHHHHHhhhceeeeec-CC
Q 012587 323 EATKERGCIAGWVP--QEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFA--DQQINSRFVGEVWKLGLDIK-DL 397 (460)
Q Consensus 323 ~~~~~n~~~~~~vp--~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~--DQ~~na~~~~e~~G~g~~~~-~~ 397 (460)
..++|+.+.+|.| ..+.|+.|++ +|||||.+|++||+++|+|++++|... ||..||+.++ ++|+|+.+. .+
T Consensus 226 -~~~~~v~~~~~~~~~~~~~l~~ad~--vI~~~G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~-~~g~~~~l~~~~ 301 (321)
T TIGR00661 226 -SYNENVEIRRITTDNFKELIKNAEL--VITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLE-DLGCGIALEYKE 301 (321)
T ss_pred -ccCCCEEEEECChHHHHHHHHhCCE--EEECCChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHH-HCCCEEEcChhh
Confidence 1357999999997 5777888887 999999999999999999999999854 8999999994 889999996 34
Q ss_pred cchHHHHHHHHHHHhHhHHHHH
Q 012587 398 CDRNIVEKAVNDLMVERKEEFM 419 (460)
Q Consensus 398 ~~~~~l~~~i~~~l~~~~~~~~ 419 (460)
+ ++.+++.++++| +.|+
T Consensus 302 ~---~~~~~~~~~~~~--~~~~ 318 (321)
T TIGR00661 302 L---RLLEAILDIRNM--KRYK 318 (321)
T ss_pred H---HHHHHHHhcccc--cccc
Confidence 4 555566666666 5554
|
This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases. |
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.3e-19 Score=174.61 Aligned_cols=322 Identities=16% Similarity=0.127 Sum_probs=191.4
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhH-HhhccccccccccCCCCceEEecCCCCCCCCCCCCC
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDR-VIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPD 84 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (460)
||||+|...+..||....+.|+++|.++||+|++++.+..... ..+ ..+++++.++..-..+ .
T Consensus 1 ~~~i~i~~~g~gG~~~~~~~la~~L~~~g~ev~vv~~~~~~~~~~~~-----------~~g~~~~~~~~~~~~~-----~ 64 (357)
T PRK00726 1 MKKILLAGGGTGGHVFPALALAEELKKRGWEVLYLGTARGMEARLVP-----------KAGIEFHFIPSGGLRR-----K 64 (357)
T ss_pred CcEEEEEcCcchHhhhHHHHHHHHHHhCCCEEEEEECCCchhhhccc-----------cCCCcEEEEeccCcCC-----C
Confidence 6899999999899999999999999999999999997542211 111 1135555554211011 1
Q ss_pred ChHHHHH---HHHhhCcHHHHHHHHcCCCCccEEEEcCC--cchHHHHHHHhCCceEEEecchhHHHHHHhhccccccCC
Q 012587 85 KFPELVD---SLNCATPPLLKEMVSDSKSPVNCIITDGY--MSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAG 159 (460)
Q Consensus 85 ~~~~~~~---~~~~~~~~~l~~~~~~~~~~pD~vv~D~~--~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 159 (460)
+....+. .+.. ....+.+++++. +||+|++... .+.+..++...++|+|...... . +
T Consensus 65 ~~~~~l~~~~~~~~-~~~~~~~~ik~~--~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~-~--------~------ 126 (357)
T PRK00726 65 GSLANLKAPFKLLK-GVLQARKILKRF--KPDVVVGFGGYVSGPGGLAARLLGIPLVIHEQNA-V--------P------ 126 (357)
T ss_pred ChHHHHHHHHHHHH-HHHHHHHHHHhc--CCCEEEECCCcchhHHHHHHHHcCCCEEEEcCCC-C--------c------
Confidence 1111111 1111 223456667775 9999999863 2346677888999998642210 0 0
Q ss_pred CCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCCCceeEeCccccccccC
Q 012587 160 ELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPNIYSIGPLNAHLKVR 239 (460)
Q Consensus 160 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~~~~~~vG~~~~~~~~~ 239 (460)
....+... ..++.++..+...+. .. ...++.++|.........
T Consensus 127 -----------------------~~~~r~~~------~~~d~ii~~~~~~~~-------~~-~~~~i~vi~n~v~~~~~~ 169 (357)
T PRK00726 127 -----------------------GLANKLLA------RFAKKVATAFPGAFP-------EF-FKPKAVVTGNPVREEILA 169 (357)
T ss_pred -----------------------cHHHHHHH------HHhchheECchhhhh-------cc-CCCCEEEECCCCChHhhc
Confidence 00001111 122333333211110 01 235678888654322111
Q ss_pred CCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCCC--cEEEEEccCCCCCCCCCCCC
Q 012587 240 IPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKK--SFLWVIRPDLISGKDGENQI 317 (460)
Q Consensus 240 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~--~~i~~~~~~~~~~~~~~~~~ 317 (460)
. ...-.+ +....++++|++..|+... ......+.++++++.. .+++.++.+ . .
T Consensus 170 ~-------------~~~~~~-~~~~~~~~~i~~~gg~~~~--~~~~~~l~~a~~~~~~~~~~~~~~G~g------~---~ 224 (357)
T PRK00726 170 L-------------AAPPAR-LAGREGKPTLLVVGGSQGA--RVLNEAVPEALALLPEALQVIHQTGKG------D---L 224 (357)
T ss_pred c-------------cchhhh-ccCCCCCeEEEEECCcHhH--HHHHHHHHHHHHHhhhCcEEEEEcCCC------c---H
Confidence 0 000011 1112345677776666432 2222333366555432 344555321 1 1
Q ss_pred chHHHHH--hcCCceeeeecC-hHhhhcccccccccccCChhHHHHHHHhCCceecccc----cccchhhHHHHHhhhce
Q 012587 318 PEELLEA--TKERGCIAGWVP-QEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPS----FADQQINSRFVGEVWKL 390 (460)
Q Consensus 318 ~~~~~~~--~~~n~~~~~~vp-~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~----~~DQ~~na~~~~e~~G~ 390 (460)
+.+.+. .+-++.+.+|+. ..++++.+++ +|+|+|.++++||+++|+|+|++|. ..||..|+..+. +.|.
T Consensus 225 -~~~~~~~~~~~~v~~~g~~~~~~~~~~~~d~--~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~-~~~~ 300 (357)
T PRK00726 225 -EEVRAAYAAGINAEVVPFIDDMAAAYAAADL--VICRAGASTVAELAAAGLPAILVPLPHAADDHQTANARALV-DAGA 300 (357)
T ss_pred -HHHHHHhhcCCcEEEeehHhhHHHHHHhCCE--EEECCCHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHH-HCCC
Confidence 222211 222367779984 5899999998 9999999999999999999999997 368999999995 7899
Q ss_pred eeeec-CCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHH
Q 012587 391 GLDIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLA 429 (460)
Q Consensus 391 g~~~~-~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~ 429 (460)
|..+. ++++++.|.+++.++++| ++++++..+-++++
T Consensus 301 g~~~~~~~~~~~~l~~~i~~ll~~--~~~~~~~~~~~~~~ 338 (357)
T PRK00726 301 ALLIPQSDLTPEKLAEKLLELLSD--PERLEAMAEAARAL 338 (357)
T ss_pred EEEEEcccCCHHHHHHHHHHHHcC--HHHHHHHHHHHHhc
Confidence 99997 677899999999999998 77776655544443
|
|
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.6e-18 Score=163.13 Aligned_cols=317 Identities=17% Similarity=0.152 Sum_probs=187.8
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCCCCChH
Q 012587 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPDKFP 87 (460)
Q Consensus 8 ~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (460)
||+|.+.++.||....+.|++.|.++||+|++++....... .... ..++++..++..-... ....
T Consensus 1 ~~~~~~~~~gG~~~~~~~la~~l~~~G~ev~v~~~~~~~~~--~~~~--------~~~~~~~~~~~~~~~~-----~~~~ 65 (350)
T cd03785 1 RILIAGGGTGGHIFPALALAEELRERGAEVLFLGTKRGLEA--RLVP--------KAGIPLHTIPVGGLRR-----KGSL 65 (350)
T ss_pred CEEEEecCchhhhhHHHHHHHHHHhCCCEEEEEECCCcchh--hccc--------ccCCceEEEEecCcCC-----CChH
Confidence 68999999999999999999999999999999987432111 1000 1235565554211111 1111
Q ss_pred HHHHHHH--hhCcHHHHHHHHcCCCCccEEEEcCC--cchHHHHHHHhCCceEEEecchhHHHHHHhhccccccCCCCCC
Q 012587 88 ELVDSLN--CATPPLLKEMVSDSKSPVNCIITDGY--MSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELPI 163 (460)
Q Consensus 88 ~~~~~~~--~~~~~~l~~~~~~~~~~pD~vv~D~~--~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~ 163 (460)
..+.... ......+..++++. +||+|++... ...+..+|...|+|++...... . +
T Consensus 66 ~~~~~~~~~~~~~~~~~~~i~~~--~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~~~~-~--------~---------- 124 (350)
T cd03785 66 KKLKAPFKLLKGVLQARKILKKF--KPDVVVGFGGYVSGPVGLAAKLLGIPLVIHEQNA-V--------P---------- 124 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc--CCCEEEECCCCcchHHHHHHHHhCCCEEEEcCCC-C--------c----------
Confidence 1111111 11224456677776 9999998653 3356778899999998632110 0 0
Q ss_pred CCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCCCceeEeCccccccccCCCcc
Q 012587 164 KGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPNIYSIGPLNAHLKVRIPEK 243 (460)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~ 243 (460)
. ... +.. ....+.++..+....+. . ...++..+|.........
T Consensus 125 -------------------~-~~~---~~~--~~~~~~vi~~s~~~~~~-----~---~~~~~~~i~n~v~~~~~~---- 167 (350)
T cd03785 125 -------------------G-LAN---RLL--ARFADRVALSFPETAKY-----F---PKDKAVVTGNPVREEILA---- 167 (350)
T ss_pred -------------------c-HHH---HHH--HHhhCEEEEcchhhhhc-----C---CCCcEEEECCCCchHHhh----
Confidence 0 000 110 12345555554322111 0 124577777554321110
Q ss_pred ccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCH-HHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHH
Q 012587 244 TYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSR-DQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELL 322 (460)
Q Consensus 244 ~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~-~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 322 (460)
.... ...+....++++|++..|+...... +.+..++..+...+..+++.++.+ . .+.+.
T Consensus 168 ---------~~~~-~~~~~~~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~~~~~~~~i~G~g------~----~~~l~ 227 (350)
T cd03785 168 ---------LDRE-RARLGLRPGKPTLLVFGGSQGARAINEAVPEALAELLRKRLQVIHQTGKG------D----LEEVK 227 (350)
T ss_pred ---------hhhh-HHhcCCCCCCeEEEEECCcHhHHHHHHHHHHHHHHhhccCeEEEEEcCCc------c----HHHHH
Confidence 0000 1122223356677776676643221 122233344433334455555321 1 12222
Q ss_pred HHh---cCCceeeeec-ChHhhhcccccccccccCChhHHHHHHHhCCceecccc----cccchhhHHHHHhhhceeeee
Q 012587 323 EAT---KERGCIAGWV-PQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPS----FADQQINSRFVGEVWKLGLDI 394 (460)
Q Consensus 323 ~~~---~~n~~~~~~v-p~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~----~~DQ~~na~~~~e~~G~g~~~ 394 (460)
+.. .+|+.+.+|+ ....+|+.+++ +|+++|.+|+.||+++|+|+|++|. ..+|..|+..+. +.|.|..+
T Consensus 228 ~~~~~~~~~v~~~g~~~~~~~~l~~ad~--~v~~sg~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~-~~g~g~~v 304 (350)
T cd03785 228 KAYEELGVNYEVFPFIDDMAAAYAAADL--VISRAGASTVAELAALGLPAILIPLPYAADDHQTANARALV-KAGAAVLI 304 (350)
T ss_pred HHHhccCCCeEEeehhhhHHHHHHhcCE--EEECCCHhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHH-hCCCEEEE
Confidence 222 3688888998 56889999998 9999999999999999999999986 357889999995 67999998
Q ss_pred c-CCcchHHHHHHHHHHHhHhHHHHHHHH
Q 012587 395 K-DLCDRNIVEKAVNDLMVERKEEFMESA 422 (460)
Q Consensus 395 ~-~~~~~~~l~~~i~~~l~~~~~~~~~~a 422 (460)
. .+.+.++|.+++.+++++ ++.+++.
T Consensus 305 ~~~~~~~~~l~~~i~~ll~~--~~~~~~~ 331 (350)
T cd03785 305 PQEELTPERLAAALLELLSD--PERLKAM 331 (350)
T ss_pred ecCCCCHHHHHHHHHHHhcC--HHHHHHH
Confidence 6 457899999999999987 6555443
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.1e-16 Score=153.28 Aligned_cols=318 Identities=18% Similarity=0.169 Sum_probs=177.6
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchh-HHhhccccccccccCCCCceEEecCCCCCCCCCCCCCC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYD-RVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPDK 85 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (460)
|||+|++.+..||+...+.|+++|.++||+|++++.+.... .+.+ ..+++++.++..-.. ..+
T Consensus 1 ~~i~~~~g~~~g~~~~~~~La~~L~~~g~eV~vv~~~~~~~~~~~~-----------~~g~~~~~i~~~~~~-----~~~ 64 (348)
T TIGR01133 1 KKVVLAAGGTGGHIFPALAVAEELIKRGVEVLWLGTKRGLEKRLVP-----------KAGIEFYFIPVGGLR-----RKG 64 (348)
T ss_pred CeEEEEeCccHHHHhHHHHHHHHHHhCCCEEEEEeCCCcchhcccc-----------cCCCceEEEeccCcC-----CCC
Confidence 49999999999999988899999999999999998743211 1111 113555555421100 112
Q ss_pred hHHHHHHHHh--hCcHHHHHHHHcCCCCccEEEEcCCcc--hHHHHHHHhCCceEEEecchhHHHHHHhhccccccCCCC
Q 012587 86 FPELVDSLNC--ATPPLLKEMVSDSKSPVNCIITDGYMS--RAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGEL 161 (460)
Q Consensus 86 ~~~~~~~~~~--~~~~~l~~~~~~~~~~pD~vv~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (460)
+...+..... .....+.+++++. +||+|++..... .+..++..+|+|++..... ..
T Consensus 65 ~~~~l~~~~~~~~~~~~l~~~i~~~--~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~~~~-~~----------------- 124 (348)
T TIGR01133 65 SFRLIKTPLKLLKAVFQARRILKKF--KPDAVIGFGGYVSGPAGLAAKLLGIPLFHHEQN-AV----------------- 124 (348)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhc--CCCEEEEcCCcccHHHHHHHHHcCCCEEEECCC-CC-----------------
Confidence 2222221111 1223456677775 999999875432 4566788899999743110 00
Q ss_pred CCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCCCceeEeCccccccccCCC
Q 012587 162 PIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPNIYSIGPLNAHLKVRIP 241 (460)
Q Consensus 162 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~~~~~~vG~~~~~~~~~~~ 241 (460)
.....+.. . ...+.++..+...-+ .. ...++|..........+
T Consensus 125 --------------------~~~~~~~~----~--~~~d~ii~~~~~~~~----------~~-~~~~i~n~v~~~~~~~~ 167 (348)
T TIGR01133 125 --------------------PGLTNKLL----S--RFAKKVLISFPGAKD----------HF-EAVLVGNPVRQEIRSLP 167 (348)
T ss_pred --------------------ccHHHHHH----H--HHhCeeEECchhHhh----------cC-CceEEcCCcCHHHhccc
Confidence 00000111 1 334555554421110 11 23455533321110000
Q ss_pred ccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhh---CCCcEEEEEccCCCCCCCCCCCCc
Q 012587 242 EKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVH---SKKSFLWVIRPDLISGKDGENQIP 318 (460)
Q Consensus 242 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~---~~~~~i~~~~~~~~~~~~~~~~~~ 318 (460)
... ..+...+++++|.+..|+... ......+.++++. .+.++++..++. ..
T Consensus 168 ----------~~~----~~~~~~~~~~~i~~~gg~~~~--~~~~~~l~~a~~~l~~~~~~~~~~~g~~---------~~- 221 (348)
T TIGR01133 168 ----------VPR----ERFGLREGKPTILVLGGSQGA--KILNELVPKALAKLAEKGIQIVHQTGKN---------DL- 221 (348)
T ss_pred ----------chh----hhcCCCCCCeEEEEECCchhH--HHHHHHHHHHHHHHhhcCcEEEEECCcc---------hH-
Confidence 000 112212245556555555542 2222223344433 345565544211 11
Q ss_pred hHHHHHhcC-Cc-eeeeec--ChHhhhcccccccccccCChhHHHHHHHhCCceeccccc---ccchhhHHHHHhhhcee
Q 012587 319 EELLEATKE-RG-CIAGWV--PQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSF---ADQQINSRFVGEVWKLG 391 (460)
Q Consensus 319 ~~~~~~~~~-n~-~~~~~v--p~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~---~DQ~~na~~~~e~~G~g 391 (460)
+.+.+...+ ++ .++.|. ....+|+.+++ +|+++|.+|+.||+++|+|+|++|.. .+|..|+..+. ..|.|
T Consensus 222 ~~l~~~~~~~~l~~~v~~~~~~~~~~l~~ad~--~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~-~~~~G 298 (348)
T TIGR01133 222 EKVKNVYQELGIEAIVTFIDENMAAAYAAADL--VISRAGASTVAELAAAGVPAILIPYPYAADDQYYNAKFLE-DLGAG 298 (348)
T ss_pred HHHHHHHhhCCceEEecCcccCHHHHHHhCCE--EEECCChhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHH-HCCCE
Confidence 222221111 11 223333 56889999998 99999988999999999999999863 46788888884 78999
Q ss_pred eeec-CCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHH
Q 012587 392 LDIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKK 431 (460)
Q Consensus 392 ~~~~-~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~ 431 (460)
..+. ++.+++.|.+++.++++| ++.++ +|++..++
T Consensus 299 ~~~~~~~~~~~~l~~~i~~ll~~--~~~~~---~~~~~~~~ 334 (348)
T TIGR01133 299 LVIRQKELLPEKLLEALLKLLLD--PANLE---AMAEAARK 334 (348)
T ss_pred EEEecccCCHHHHHHHHHHHHcC--HHHHH---HHHHHHHh
Confidence 9886 567899999999999997 66554 34444443
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.2e-16 Score=156.00 Aligned_cols=348 Identities=11% Similarity=0.016 Sum_probs=193.6
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCC-CCCCCCCCCCCC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTD-GLPRDHPRTPDK 85 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 85 (460)
.||+|++.++.||++|. +|+++|+++|++|.|++.... .+.+.+. ...+++..++- ++. ..
T Consensus 6 ~ki~i~aGgtsGhi~pa-al~~~l~~~~~~~~~~g~gg~--~m~~~g~--------~~~~~~~~l~v~G~~-------~~ 67 (385)
T TIGR00215 6 PTIALVAGEASGDILGA-GLRQQLKEHYPNARFIGVAGP--RMAAEGC--------EVLYSMEELSVMGLR-------EV 67 (385)
T ss_pred CeEEEEeCCccHHHHHH-HHHHHHHhcCCCcEEEEEccH--HHHhCcC--------ccccChHHhhhccHH-------HH
Confidence 48999999999999999 999999999999999986432 3333211 00122222221 110 01
Q ss_pred hHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCC-cch--HHHHHHHhCCceEEEecchhHHHHHHhhccccccCCCCC
Q 012587 86 FPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGY-MSR--AIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELP 162 (460)
Q Consensus 86 ~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~-~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p 162 (460)
+. .+..+.. ....+..++++. +||+||.-.. .+. ....|+.+|||++.+.+ |- .+..
T Consensus 68 l~-~~~~~~~-~~~~~~~~l~~~--kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i~-P~--------~waw------- 127 (385)
T TIGR00215 68 LG-RLGRLLK-IRKEVVQLAKQA--KPDLLVGIDAPDFNLTKELKKKDPGIKIIYYIS-PQ--------VWAW------- 127 (385)
T ss_pred HH-HHHHHHH-HHHHHHHHHHhc--CCCEEEEeCCCCccHHHHHHHhhCCCCEEEEeC-Cc--------Hhhc-------
Confidence 11 1222222 223556777776 9999996433 223 33388999999997542 10 0000
Q ss_pred CCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCCCceeEeCccccccccCCCc
Q 012587 163 IKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPNIYSIGPLNAHLKVRIPE 242 (460)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~~~~~~vG~~~~~~~~~~~~ 242 (460)
.....+.+.+ .++.+++.+.. +... ... ...+..++|...........
T Consensus 128 -------------------~~~~~r~l~~------~~d~v~~~~~~--e~~~---~~~-~g~~~~~vGnPv~~~~~~~~- 175 (385)
T TIGR00215 128 -------------------RKWRAKKIEK------ATDFLLAILPF--EKAF---YQK-KNVPCRFVGHPLLDAIPLYK- 175 (385)
T ss_pred -------------------CcchHHHHHH------HHhHhhccCCC--cHHH---HHh-cCCCEEEECCchhhhccccC-
Confidence 0001112221 12222222211 1111 122 22356678854432111000
Q ss_pred cccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhC-----CCcEEEEEccCCCCCCCCCCCC
Q 012587 243 KTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHS-----KKSFLWVIRPDLISGKDGENQI 317 (460)
Q Consensus 243 ~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~~~~ 317 (460)
....+..+-+....++++|.+-.||....-......++++++.+ +.++++..... ..
T Consensus 176 ---------~~~~~~r~~lgl~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~---------~~ 237 (385)
T TIGR00215 176 ---------PDRKSAREKLGIDHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNF---------KR 237 (385)
T ss_pred ---------CCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCc---------hh
Confidence 01111222222234678888888887643223344455444432 33455544211 01
Q ss_pred chHHH---HHhcCCceeeeec-ChHhhhcccccccccccCChhHHHHHHHhCCceecc----cccc---------cchhh
Q 012587 318 PEELL---EATKERGCIAGWV-PQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICW----PSFA---------DQQIN 380 (460)
Q Consensus 318 ~~~~~---~~~~~n~~~~~~v-p~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~----P~~~---------DQ~~n 380 (460)
...+. +....+..+..+. ....+++.+++ +|+-+|..|+ |++++|+|+|++ |+.. +|..|
T Consensus 238 ~~~~~~~~~~~~~~~~v~~~~~~~~~~l~aADl--~V~~SGt~tl-Ea~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~ 314 (385)
T TIGR00215 238 RLQFEQIKAEYGPDLQLHLIDGDARKAMFAADA--ALLASGTAAL-EAALIKTPMVVGYRMKPLTFLIARRLVKTDYISL 314 (385)
T ss_pred HHHHHHHHHHhCCCCcEEEECchHHHHHHhCCE--EeecCCHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeec
Confidence 11111 1111233332221 34668898997 9999999988 999999999999 7632 38889
Q ss_pred HHHHHhhhceeeeec-CCcchHHHHHHHHHHHhHhHH----HHHHHHHHHHHHHHHHhhcCCChHHHHHHHHH
Q 012587 381 SRFVGEVWKLGLDIK-DLCDRNIVEKAVNDLMVERKE----EFMESADRMANLAKKSVNKGGSSYCNLDRLVN 448 (460)
Q Consensus 381 a~~~~e~~G~g~~~~-~~~~~~~l~~~i~~~l~~~~~----~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 448 (460)
++.++ ..++...+. +++|++.|.+.+.++|+| + +++++.++--+.+++...++|.+.++++.+++
T Consensus 315 ~nil~-~~~~~pel~q~~~~~~~l~~~~~~ll~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~i~~ 384 (385)
T TIGR00215 315 PNILA-NRLLVPELLQEECTPHPLAIALLLLLEN--GLKAYKEMHRERQFFEELRQRIYCNADSERAAQAVLE 384 (385)
T ss_pred cHHhc-CCccchhhcCCCCCHHHHHHHHHHHhcC--CcccHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhh
Confidence 99996 668888877 789999999999999998 6 55555544444444444546666666554443
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >COG4671 Predicted glycosyl transferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.74 E-value=7.9e-16 Score=139.32 Aligned_cols=328 Identities=16% Similarity=0.124 Sum_probs=201.6
Q ss_pred CCCCcEEEEEcCC--CCCCHHHHHHHHHHHHhC--CCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCC
Q 012587 3 KQDHVHVAILPLP--AVGHVNSMLNLAELLGHA--GIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRD 78 (460)
Q Consensus 3 ~~~~~~il~~~~~--~~Gh~~p~l~La~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (460)
.++++||+|++.- +.||+.+++.||++|.+. |.+|+++++......+. . ..++++..+|.....+
T Consensus 6 ~~~~~Ri~~Yshd~~GlGHlrR~~~Ia~aLv~d~~~~~Il~IsG~~~~~~F~--------~---~~gVd~V~LPsl~k~~ 74 (400)
T COG4671 6 ASKRPRILFYSHDLLGLGHLRRALRIAHALVEDYLGFDILIISGGPPAGGFP--------G---PAGVDFVKLPSLIKGD 74 (400)
T ss_pred hhccceEEEEehhhccchHHHHHHHHHHHHhhcccCceEEEEeCCCccCCCC--------C---cccCceEecCceEecC
Confidence 3567799999986 889999999999999998 99999999855422221 1 3578999998532221
Q ss_pred --CC---CCCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcchH-----HHHHHHh--CCceEEEecchhHHH
Q 012587 79 --HP---RTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSRA-----IDAAREV--GVSIIYFRTISACAF 146 (460)
Q Consensus 79 --~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~~~-----~~~A~~l--giP~v~~~~~~~~~~ 146 (460)
+. +...+ ...+.+.-...+...++.+ +||++|+|.+-+.. ..+++.- +-+++..-.
T Consensus 75 ~G~~~~~d~~~~----l~e~~~~Rs~lil~t~~~f--kPDi~IVd~~P~Glr~EL~ptL~yl~~~~t~~vL~lr------ 142 (400)
T COG4671 75 NGEYGLVDLDGD----LEETKKLRSQLILSTAETF--KPDIFIVDKFPFGLRFELLPTLEYLKTTGTRLVLGLR------ 142 (400)
T ss_pred CCceeeeecCCC----HHHHHHHHHHHHHHHHHhc--CCCEEEEeccccchhhhhhHHHHHHhhcCCcceeehH------
Confidence 11 11122 2333322234556666666 99999999765531 1111110 101111000
Q ss_pred HHHhhccccccCCCCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhc-CCCc
Q 012587 147 WSFHCIPDIIDAGELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNH-SCPN 225 (460)
Q Consensus 147 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~-~~~~ 225 (460)
-+.+.+.... ..+......+... ...+.+++...|.+..+...+.-+. .-..
T Consensus 143 ---------------------~i~D~p~~~~----~~w~~~~~~~~I~--r~yD~V~v~GdP~f~d~~~~~~~~~~i~~k 195 (400)
T COG4671 143 ---------------------SIRDIPQELE----ADWRRAETVRLIN--RFYDLVLVYGDPDFYDPLTEFPFAPAIRAK 195 (400)
T ss_pred ---------------------hhhhchhhhc----cchhhhHHHHHHH--HhheEEEEecCccccChhhcCCccHhhhhh
Confidence 0111111111 1111111221112 4456777777776554432211110 1156
Q ss_pred eeEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhh-CCCc--EEEE
Q 012587 226 IYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVH-SKKS--FLWV 302 (460)
Q Consensus 226 ~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~-~~~~--~i~~ 302 (460)
+.++|.+..+.+...++ |.. .+.+..|+||-|... ...+++...++|-.. .+.+ .+++
T Consensus 196 ~~ytG~vq~~~~~~~~p-----------------~~~-~pE~~~Ilvs~GGG~-dG~eLi~~~l~A~~~l~~l~~~~~iv 256 (400)
T COG4671 196 MRYTGFVQRSLPHLPLP-----------------PHE-APEGFDILVSVGGGA-DGAELIETALAAAQLLAGLNHKWLIV 256 (400)
T ss_pred eeEeEEeeccCcCCCCC-----------------CcC-CCccceEEEecCCCh-hhHHHHHHHHHHhhhCCCCCcceEEE
Confidence 99999983221111100 111 135567889988654 355667776666554 3444 4555
Q ss_pred EccCCCCCCCCCCCCchHHHH----Hhc--CCceeeeecCh-HhhhcccccccccccCChhHHHHHHHhCCceeccccc-
Q 012587 303 IRPDLISGKDGENQIPEELLE----ATK--ERGCIAGWVPQ-EEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSF- 374 (460)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~----~~~--~n~~~~~~vp~-~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~- 374 (460)
+++ ..|....+ ..+ +++.+..|-.+ ..++..++. +|+-||+||++|=|.+|+|.|++|..
T Consensus 257 tGP----------~MP~~~r~~l~~~A~~~p~i~I~~f~~~~~~ll~gA~~--vVSm~GYNTvCeILs~~k~aLivPr~~ 324 (400)
T COG4671 257 TGP----------FMPEAQRQKLLASAPKRPHISIFEFRNDFESLLAGARL--VVSMGGYNTVCEILSFGKPALIVPRAA 324 (400)
T ss_pred eCC----------CCCHHHHHHHHHhcccCCCeEEEEhhhhHHHHHHhhhe--eeecccchhhhHHHhCCCceEEeccCC
Confidence 532 34543332 223 68889999875 788888887 99999999999999999999999985
Q ss_pred --ccchhhHHHHHhhhceeeeec-CCcchHHHHHHHHHHHh
Q 012587 375 --ADQQINSRFVGEVWKLGLDIK-DLCDRNIVEKAVNDLMV 412 (460)
Q Consensus 375 --~DQ~~na~~~~e~~G~g~~~~-~~~~~~~l~~~i~~~l~ 412 (460)
.||-.-|.|+ +++|+.-++. +++++..|++++...++
T Consensus 325 p~eEQliRA~Rl-~~LGL~dvL~pe~lt~~~La~al~~~l~ 364 (400)
T COG4671 325 PREEQLIRAQRL-EELGLVDVLLPENLTPQNLADALKAALA 364 (400)
T ss_pred CcHHHHHHHHHH-HhcCcceeeCcccCChHHHHHHHHhccc
Confidence 3999999999 5899998887 89999999999999987
|
|
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.8e-15 Score=146.16 Aligned_cols=140 Identities=16% Similarity=0.269 Sum_probs=98.9
Q ss_pred CCCcEEEEEecCcccCCHHHHHHHHHHHhhC-CCcEEEEEccCCCCCCCCCCCCchHHHH---HhcCCceeeeecCh-Hh
Q 012587 265 PKQSVIYVSFGSIAVMSRDQLIEFYYGLVHS-KKSFLWVIRPDLISGKDGENQIPEELLE---ATKERGCIAGWVPQ-EE 339 (460)
Q Consensus 265 ~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~---~~~~n~~~~~~vp~-~~ 339 (460)
+++++|++..|+.... ..+..+++++.+. +.++++..+.+ ..+.+.+.+ ..++|+.+.+|+++ .+
T Consensus 200 ~~~~~il~~~G~~~~~--k~~~~li~~l~~~~~~~~viv~G~~--------~~~~~~l~~~~~~~~~~v~~~g~~~~~~~ 269 (380)
T PRK13609 200 PNKKILLIMAGAHGVL--GNVKELCQSLMSVPDLQVVVVCGKN--------EALKQSLEDLQETNPDALKVFGYVENIDE 269 (380)
T ss_pred CCCcEEEEEcCCCCCC--cCHHHHHHHHhhCCCcEEEEEeCCC--------HHHHHHHHHHHhcCCCcEEEEechhhHHH
Confidence 3567888877887532 2245566666543 45666665421 011122221 22358888999986 58
Q ss_pred hhcccccccccccCChhHHHHHHHhCCceecc-cccccchhhHHHHHhhhceeeeecCCcchHHHHHHHHHHHhHhHHHH
Q 012587 340 VLAHSAVGGFLTHCGWNSTLESIVAGMPMICW-PSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVERKEEF 418 (460)
Q Consensus 340 il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~-P~~~DQ~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~~~~~~~ 418 (460)
++..+++ +|+.+|..|+.||+++|+|+|+. |..+.|..|+..+ ++.|+|+.. .+.++|.+++.++++| ++.
T Consensus 270 l~~~aD~--~v~~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~-~~~G~~~~~---~~~~~l~~~i~~ll~~--~~~ 341 (380)
T PRK13609 270 LFRVTSC--MITKPGGITLSEAAALGVPVILYKPVPGQEKENAMYF-ERKGAAVVI---RDDEEVFAKTEALLQD--DMK 341 (380)
T ss_pred HHHhccE--EEeCCCchHHHHHHHhCCCEEECCCCCCcchHHHHHH-HhCCcEEEE---CCHHHHHHHHHHHHCC--HHH
Confidence 9999997 99999988999999999999885 6666778899888 467988866 4779999999999987 665
Q ss_pred HHHH
Q 012587 419 MESA 422 (460)
Q Consensus 419 ~~~a 422 (460)
+++.
T Consensus 342 ~~~m 345 (380)
T PRK13609 342 LLQM 345 (380)
T ss_pred HHHH
Confidence 4443
|
|
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.1e-15 Score=139.35 Aligned_cols=255 Identities=19% Similarity=0.226 Sum_probs=148.5
Q ss_pred CCCCHHHHHHHHHHHHhCCCeEEEEeCccch---hHHhhccccccccccCCCCceEEecCCCCCCCCCCCCCChHHHHHH
Q 012587 16 AVGHVNSMLNLAELLGHAGIKITFLNTEHYY---DRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPDKFPELVDS 92 (460)
Q Consensus 16 ~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (460)
+.||+.++++||++|+++||+|+|++..... +.+.+ .++.+..+++...
T Consensus 13 G~GHv~Rcl~LA~~l~~~g~~v~f~~~~~~~~~~~~i~~------------~g~~v~~~~~~~~---------------- 64 (279)
T TIGR03590 13 GLGHVMRCLTLARALHAQGAEVAFACKPLPGDLIDLLLS------------AGFPVYELPDESS---------------- 64 (279)
T ss_pred cccHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHH------------cCCeEEEecCCCc----------------
Confidence 7899999999999999999999999975432 22222 2366666653210
Q ss_pred HHhhCcHHHHHHHHcCCCCccEEEEcCCcchH--HHHHHHhCCceEEEecchhHHHHHHhhccccccCCCCCCCCCccCC
Q 012587 93 LNCATPPLLKEMVSDSKSPVNCIITDGYMSRA--IDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELPIKGFLRCR 170 (460)
Q Consensus 93 ~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~~~--~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 170 (460)
+..-...+.+++++. +||+||.|.+.... ....+..+.+++.+.-.....
T Consensus 65 -~~~d~~~~~~~l~~~--~~d~vV~D~y~~~~~~~~~~k~~~~~l~~iDD~~~~~------------------------- 116 (279)
T TIGR03590 65 -RYDDALELINLLEEE--KFDILIVDHYGLDADWEKLIKEFGRKILVIDDLADRP------------------------- 116 (279)
T ss_pred -hhhhHHHHHHHHHhc--CCCEEEEcCCCCCHHHHHHHHHhCCeEEEEecCCCCC-------------------------
Confidence 011223456666665 99999999875522 222334456666543321000
Q ss_pred CCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCC-CceeEeCccccccccCCCccccCCCC
Q 012587 171 DLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSC-PNIYSIGPLNAHLKVRIPEKTYSSSS 249 (460)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~-~~~~~vG~~~~~~~~~~~~~~~~~~~ 249 (460)
..++ +++|..+..+ ...+... .+ ...+..|+-...... +
T Consensus 117 --------------------------~~~D-~vin~~~~~~--~~~y~~~-~~~~~~~l~G~~Y~~lr~----------e 156 (279)
T TIGR03590 117 --------------------------HDCD-LLLDQNLGAD--ASDYQGL-VPANCRLLLGPSYALLRE----------E 156 (279)
T ss_pred --------------------------cCCC-EEEeCCCCcC--HhHhccc-CcCCCeEEecchHHhhhH----------H
Confidence 1122 2223222111 1111000 01 135667762221110 1
Q ss_pred ccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhC--CCcEEEEEccCCCCCCCCCCCCchHHHH--Hh
Q 012587 250 LWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHS--KKSFLWVIRPDLISGKDGENQIPEELLE--AT 325 (460)
Q Consensus 250 ~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~ 325 (460)
|+... .........+.|+|++|.... .+....++++++.. +.++.++++.. . ...+.+.+ ..
T Consensus 157 F~~~~----~~~~~~~~~~~iLi~~GG~d~--~~~~~~~l~~l~~~~~~~~i~vv~G~~------~--~~~~~l~~~~~~ 222 (279)
T TIGR03590 157 FYQLA----TANKRRKPLRRVLVSFGGADP--DNLTLKLLSALAESQINISITLVTGSS------N--PNLDELKKFAKE 222 (279)
T ss_pred HHHhh----HhhhcccccCeEEEEeCCcCC--cCHHHHHHHHHhccccCceEEEEECCC------C--cCHHHHHHHHHh
Confidence 11000 000011124678999996643 23455666777654 45677777532 1 12222322 12
Q ss_pred cCCceeeeecCh-HhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHHH
Q 012587 326 KERGCIAGWVPQ-EEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRF 383 (460)
Q Consensus 326 ~~n~~~~~~vp~-~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~ 383 (460)
..|+.+..++++ ..+|+.+++ +|++|| +|++|++++|+|+|++|...+|..||+.
T Consensus 223 ~~~i~~~~~~~~m~~lm~~aDl--~Is~~G-~T~~E~~a~g~P~i~i~~~~nQ~~~a~~ 278 (279)
T TIGR03590 223 YPNIILFIDVENMAELMNEADL--AIGAAG-STSWERCCLGLPSLAICLAENQQSNSQQ 278 (279)
T ss_pred CCCEEEEeCHHHHHHHHHHCCE--EEECCc-hHHHHHHHcCCCEEEEEecccHHHHhhh
Confidence 458888899997 699999998 999999 9999999999999999999999999875
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.7e-14 Score=138.52 Aligned_cols=323 Identities=14% Similarity=0.069 Sum_probs=167.1
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCCCCC
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPDK 85 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (460)
||||+|+..++.||++|.+ ++++|+++++++.+++.... .+.+... ...+.++.++- ..
T Consensus 1 ~~ki~i~~Ggt~G~i~~a~-l~~~L~~~~~~~~~~~~~~~--~~~~~~~--------~~~~~~~~l~~----------~g 59 (380)
T PRK00025 1 PLRIAIVAGEVSGDLLGAG-LIRALKARAPNLEFVGVGGP--RMQAAGC--------ESLFDMEELAV----------MG 59 (380)
T ss_pred CceEEEEecCcCHHHHHHH-HHHHHHhcCCCcEEEEEccH--HHHhCCC--------ccccCHHHhhh----------cc
Confidence 4699999999999999999 99999999888888874331 2332211 00122222211 11
Q ss_pred hHHHHHH---HHhhCcHHHHHHHHcCCCCccEEEEcCC-cchH--HHHHHHhCCceEEEecchhHHHHHHhhccccccCC
Q 012587 86 FPELVDS---LNCATPPLLKEMVSDSKSPVNCIITDGY-MSRA--IDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAG 159 (460)
Q Consensus 86 ~~~~~~~---~~~~~~~~l~~~~~~~~~~pD~vv~D~~-~~~~--~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 159 (460)
+...+.. +.. ....+..+++++ +||+|+.-.. ..+. ...|...|||++.+.....+ .
T Consensus 60 ~~~~~~~~~~~~~-~~~~~~~~l~~~--kPdivi~~~~~~~~~~~a~~a~~~~ip~i~~~~~~~~---------~----- 122 (380)
T PRK00025 60 LVEVLPRLPRLLK-IRRRLKRRLLAE--PPDVFIGIDAPDFNLRLEKKLRKAGIPTIHYVSPSVW---------A----- 122 (380)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHc--CCCEEEEeCCCCCCHHHHHHHHHCCCCEEEEeCCchh---------h-----
Confidence 1122222 221 345567788887 9999876332 2233 33467889998875321100 0
Q ss_pred CCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCCCceeEeCccccccccC
Q 012587 160 ELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPNIYSIGPLNAHLKVR 239 (460)
Q Consensus 160 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~~~~~~vG~~~~~~~~~ 239 (460)
+ .......+. ..++.++..+... .. .... ..-++.++|-........
T Consensus 123 ---------------~------~~~~~~~~~------~~~d~i~~~~~~~--~~---~~~~-~g~~~~~~G~p~~~~~~~ 169 (380)
T PRK00025 123 ---------------W------RQGRAFKIA------KATDHVLALFPFE--AA---FYDK-LGVPVTFVGHPLADAIPL 169 (380)
T ss_pred ---------------c------CchHHHHHH------HHHhhheeCCccC--HH---HHHh-cCCCeEEECcCHHHhccc
Confidence 0 000111111 2233334333211 11 1122 212367777433221100
Q ss_pred CCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhC-----CCcEEEEEccCCCCCCCCC
Q 012587 240 IPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHS-----KKSFLWVIRPDLISGKDGE 314 (460)
Q Consensus 240 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~ 314 (460)
. .........+....++++|++..||...........++++++.+ +.+++++.+.+
T Consensus 170 ~-----------~~~~~~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~-------- 230 (380)
T PRK00025 170 L-----------PDRAAARARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVNP-------- 230 (380)
T ss_pred c-----------cChHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCh--------
Confidence 0 01111222222223457777777776532222344444544432 34566654211
Q ss_pred CCCchHHHHHh----cCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceecccccc--------cchhh--
Q 012587 315 NQIPEELLEAT----KERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFA--------DQQIN-- 380 (460)
Q Consensus 315 ~~~~~~~~~~~----~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~--------DQ~~n-- 380 (460)
...+.+.+.. .-++.+.. -.-..+++.+++ +|+-+|.+++ ||+++|+|+|++|... .|..|
T Consensus 231 -~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~aDl--~v~~sG~~~l-Ea~a~G~PvI~~~~~~~~~~~~~~~~~~~~~ 305 (380)
T PRK00025 231 -KRREQIEEALAEYAGLEVTLLD-GQKREAMAAADA--ALAASGTVTL-ELALLKVPMVVGYKVSPLTFWIAKRLVKVPY 305 (380)
T ss_pred -hhHHHHHHHHhhcCCCCeEEEc-ccHHHHHHhCCE--EEECccHHHH-HHHHhCCCEEEEEccCHHHHHHHHHHHcCCe
Confidence 1112222211 11333322 124778899998 9999998888 9999999999995421 22222
Q ss_pred ---HHHHHhhhceeeeec-CCcchHHHHHHHHHHHhHhHHHHHHHHHHHH
Q 012587 381 ---SRFVGEVWKLGLDIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMA 426 (460)
Q Consensus 381 ---a~~~~e~~G~g~~~~-~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~ 426 (460)
+..+. ..+++..+. ...+++.|.+.+.++++| ++.+++..+-.
T Consensus 306 ~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~i~~ll~~--~~~~~~~~~~~ 352 (380)
T PRK00025 306 VSLPNLLA-GRELVPELLQEEATPEKLARALLPLLAD--GARRQALLEGF 352 (380)
T ss_pred eehHHHhc-CCCcchhhcCCCCCHHHHHHHHHHHhcC--HHHHHHHHHHH
Confidence 23332 333344444 678999999999999998 76665444433
|
|
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.9e-14 Score=139.99 Aligned_cols=164 Identities=18% Similarity=0.213 Sum_probs=107.5
Q ss_pred CCCcEEEEEecCcccCCHHHHHHHHHHH-hh-CCCcEEEEEccCCCCCCCCCCCCchHHHHH--hcCCceeeeecCh-Hh
Q 012587 265 PKQSVIYVSFGSIAVMSRDQLIEFYYGL-VH-SKKSFLWVIRPDLISGKDGENQIPEELLEA--TKERGCIAGWVPQ-EE 339 (460)
Q Consensus 265 ~~~~~V~vs~GS~~~~~~~~~~~~~~al-~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~n~~~~~~vp~-~~ 339 (460)
+++++|++..|+.... ..+..+++++ +. .+.+++++.+.+ ..+-+.+.+. ..+++.+.+|+.+ .+
T Consensus 200 ~~~~~ilv~~G~lg~~--k~~~~li~~~~~~~~~~~~vvv~G~~--------~~l~~~l~~~~~~~~~v~~~G~~~~~~~ 269 (391)
T PRK13608 200 PDKQTILMSAGAFGVS--KGFDTMITDILAKSANAQVVMICGKS--------KELKRSLTAKFKSNENVLILGYTKHMNE 269 (391)
T ss_pred CCCCEEEEECCCcccc--hhHHHHHHHHHhcCCCceEEEEcCCC--------HHHHHHHHHHhccCCCeEEEeccchHHH
Confidence 3578888988988631 2344444443 32 245666665421 0111222221 2357888899975 67
Q ss_pred hhcccccccccccCChhHHHHHHHhCCceecc-cccccchhhHHHHHhhhceeeeecCCcchHHHHHHHHHHHhHhHHHH
Q 012587 340 VLAHSAVGGFLTHCGWNSTLESIVAGMPMICW-PSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVERKEEF 418 (460)
Q Consensus 340 il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~-P~~~DQ~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~~~~~~~ 418 (460)
+++.+++ +|+..|..|+.||+++|+|+|++ |..+.|..|+..+ ++.|+|+... +.+++.++|.++++| ++.
T Consensus 270 ~~~~aDl--~I~k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~-~~~G~g~~~~---~~~~l~~~i~~ll~~--~~~ 341 (391)
T PRK13608 270 WMASSQL--MITKPGGITISEGLARCIPMIFLNPAPGQELENALYF-EEKGFGKIAD---TPEEAIKIVASLTNG--NEQ 341 (391)
T ss_pred HHHhhhE--EEeCCchHHHHHHHHhCCCEEECCCCCCcchhHHHHH-HhCCcEEEeC---CHHHHHHHHHHHhcC--HHH
Confidence 8999998 99988888999999999999998 6666677899999 5789998773 788999999999987 543
Q ss_pred HHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Q 012587 419 MESADRMANLAKKSVNKGGSSYCNLDRLVNDI 450 (460)
Q Consensus 419 ~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l 450 (460)
.++|++..++. .+..+....++.+.+.+
T Consensus 342 ---~~~m~~~~~~~-~~~~s~~~i~~~l~~l~ 369 (391)
T PRK13608 342 ---LTNMISTMEQD-KIKYATQTICRDLLDLI 369 (391)
T ss_pred ---HHHHHHHHHHh-cCCCCHHHHHHHHHHHh
Confidence 34455555543 11233334444444443
|
|
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.9e-12 Score=126.90 Aligned_cols=149 Identities=15% Similarity=0.155 Sum_probs=98.5
Q ss_pred CCCcEEEEEecCcccCCHH-HHHHHHHHHh-----hCCCcEEEEEccCCCCCCCCCCCCchHHHHH-hcCCceeeeecCh
Q 012587 265 PKQSVIYVSFGSIAVMSRD-QLIEFYYGLV-----HSKKSFLWVIRPDLISGKDGENQIPEELLEA-TKERGCIAGWVPQ 337 (460)
Q Consensus 265 ~~~~~V~vs~GS~~~~~~~-~~~~~~~al~-----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~n~~~~~~vp~ 337 (460)
+++++|++..|+....... .++.+...+. ..+.++++.++.+ ..+-..+.+. ...++.+.+|+++
T Consensus 204 ~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~--------~~~~~~L~~~~~~~~v~~~G~~~~ 275 (382)
T PLN02605 204 EDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRN--------KKLQSKLESRDWKIPVKVRGFVTN 275 (382)
T ss_pred CCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCC--------HHHHHHHHhhcccCCeEEEecccc
Confidence 4677887777766543332 2333332221 1234566666422 0111222211 1346778899985
Q ss_pred -HhhhcccccccccccCChhHHHHHHHhCCceecccccccch-hhHHHHHhhhceeeeecCCcchHHHHHHHHHHHhHhH
Q 012587 338 -EEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQ-INSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVERK 415 (460)
Q Consensus 338 -~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~-~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~~~~ 415 (460)
.+++..+++ +|+.+|.+|+.||+++|+|+|+.+....|. .|+..+. +.|.|+.+ -+++.|.+++.+++++
T Consensus 276 ~~~l~~aaDv--~V~~~g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i~-~~g~g~~~---~~~~~la~~i~~ll~~-- 347 (382)
T PLN02605 276 MEEWMGACDC--IITKAGPGTIAEALIRGLPIILNGYIPGQEEGNVPYVV-DNGFGAFS---ESPKEIARIVAEWFGD-- 347 (382)
T ss_pred HHHHHHhCCE--EEECCCcchHHHHHHcCCCEEEecCCCccchhhHHHHH-hCCceeec---CCHHHHHHHHHHHHcC--
Confidence 888999998 999999999999999999999998766675 6888885 67999866 5889999999999974
Q ss_pred HHHHHHHHHHHHHHHH
Q 012587 416 EEFMESADRMANLAKK 431 (460)
Q Consensus 416 ~~~~~~a~~l~~~~~~ 431 (460)
. .+..++|++..++
T Consensus 348 ~--~~~~~~m~~~~~~ 361 (382)
T PLN02605 348 K--SDELEAMSENALK 361 (382)
T ss_pred C--HHHHHHHHHHHHH
Confidence 1 2334445555554
|
|
| >PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.3e-15 Score=131.21 Aligned_cols=135 Identities=16% Similarity=0.222 Sum_probs=93.5
Q ss_pred EEEEEecCcccCCHH-HHHHHHHHHhh--CCCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecC-hHhhhccc
Q 012587 269 VIYVSFGSIAVMSRD-QLIEFYYGLVH--SKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVP-QEEVLAHS 344 (460)
Q Consensus 269 ~V~vs~GS~~~~~~~-~~~~~~~al~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp-~~~il~~~ 344 (460)
+|+|+.||.....-. .+..+...+.. ...++++.++..... .....+ ...+.|+.+.+|++ ..++++.+
T Consensus 1 tilv~gGs~g~~~l~~~v~~~~~~~~~~~~~~~viv~~G~~~~~------~~~~~~-~~~~~~v~~~~~~~~m~~~m~~a 73 (167)
T PF04101_consen 1 TILVTGGSQGARDLNRLVLKILELLAEKHKNIQVIVQTGKNNYE------ELKIKV-ENFNPNVKVFGFVDNMAELMAAA 73 (167)
T ss_dssp -EEEEETTTSHHHHHCCCCCHHHHHHHHHHHCCCCCCCTTCECH------HHCCCH-CCTTCCCEEECSSSSHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHhhcCCCcEEEEEECCCcHH------HHHHHH-hccCCcEEEEechhhHHHHHHHc
Confidence 489999988632111 12223333332 246788887533100 000100 01125788999999 79999999
Q ss_pred ccccccccCChhHHHHHHHhCCceecccccc----cchhhHHHHHhhhceeeeec-CCcchHHHHHHHHHHHhH
Q 012587 345 AVGGFLTHCGWNSTLESIVAGMPMICWPSFA----DQQINSRFVGEVWKLGLDIK-DLCDRNIVEKAVNDLMVE 413 (460)
Q Consensus 345 ~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~----DQ~~na~~~~e~~G~g~~~~-~~~~~~~l~~~i~~~l~~ 413 (460)
++ +|||||.||++|++++|+|+|++|... +|..||..++ +.|+|..+. ...+.+.|.+.|.+++++
T Consensus 74 Dl--vIs~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~-~~g~~~~~~~~~~~~~~L~~~i~~l~~~ 144 (167)
T PF04101_consen 74 DL--VISHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELA-KKGAAIMLDESELNPEELAEAIEELLSD 144 (167)
T ss_dssp SE--EEECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHH-HCCCCCCSECCC-SCCCHHHHHHCHCCC
T ss_pred CE--EEeCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHH-HcCCccccCcccCCHHHHHHHHHHHHcC
Confidence 98 999999999999999999999999987 9999999995 789999998 677799999999999986
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B. |
| >PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.42 E-value=1e-13 Score=115.49 Aligned_cols=124 Identities=22% Similarity=0.289 Sum_probs=80.1
Q ss_pred EEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCC--CCCC--CCCCCC
Q 012587 9 VAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDG--LPRD--HPRTPD 84 (460)
Q Consensus 9 il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~ 84 (460)
|+|++.|+.||++|+++||++|++|||+|++++++.+.+.+.+ . +++|.+++.. ++.. ......
T Consensus 1 Ili~~~Gt~Ghv~P~lala~~L~~rGh~V~~~~~~~~~~~v~~-~-----------Gl~~~~~~~~~~~~~~~~~~~~~~ 68 (139)
T PF03033_consen 1 ILIATGGTRGHVYPFLALARALRRRGHEVRLATPPDFRERVEA-A-----------GLEFVPIPGDSRLPRSLEPLANLR 68 (139)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHTT-EEEEEETGGGHHHHHH-T-----------T-EEEESSSCGGGGHHHHHHHHHH
T ss_pred CEEEEcCChhHHHHHHHHHHHHhccCCeEEEeecccceecccc-c-----------CceEEEecCCcCcCcccchhhhhh
Confidence 7899999999999999999999999999999999887777744 3 4899988754 0000 000000
Q ss_pred ChHHHHHHHHhhCcHHHHHHHHcC------CCCccEEEEcCCcchHHHHHHHhCCceEEEecchhHH
Q 012587 85 KFPELVDSLNCATPPLLKEMVSDS------KSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACA 145 (460)
Q Consensus 85 ~~~~~~~~~~~~~~~~l~~~~~~~------~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~ 145 (460)
........+ ....+.+.+...+. ...+|+++.+.....+..+||.+|||++.....+.+.
T Consensus 69 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~vaE~~~iP~~~~~~~p~~~ 134 (139)
T PF03033_consen 69 RLARLIRGL-EEAMRILARFRPDLVVAAGGYVADDVIIAAPLAFAAALVAEQLGIPGVANRLFPWFA 134 (139)
T ss_dssp CHHHHHHHH-HHHHHHHHHHHHCCCCHCTTTTECCEECHHHHHTHHHHHHHHHTS-EEEEESSGGGS
T ss_pred hHHHHhhhh-hHHHHHhhccCcchhhhccCcccchHHHhhhhcCccceeEhhhCchHHHHhhCCcCc
Confidence 011111111 11222223333222 1367888888877789999999999999988876543
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B .... |
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.1e-10 Score=114.33 Aligned_cols=328 Identities=15% Similarity=0.076 Sum_probs=175.4
Q ss_pred CCCCHHHHHHHHHHHHh--CCCeEE---EEeCccchh-HHhhccccccccccCCCCceEEecCCCCCCCCCCCCCChHHH
Q 012587 16 AVGHVNSMLNLAELLGH--AGIKIT---FLNTEHYYD-RVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPDKFPEL 89 (460)
Q Consensus 16 ~~Gh~~p~l~La~~L~~--rGH~Vt---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (460)
++|-=.--++|+++|++ .|++|. +++...-++ ...+.. + .+..+| .+-.. ...+...
T Consensus 6 ghged~~a~ai~~~l~~~~~~~~v~~~p~vG~~~~~e~~~ip~~-----------g-~~~~~~----sgg~~-~~~~~~~ 68 (396)
T TIGR03492 6 GHGEDLIAARIAKALLQLSPDLNLEALPLVGEGRAYQNLGIPII-----------G-PTKELP----SGGFS-YQSLRGL 68 (396)
T ss_pred CchHHHHHHHHHHHHHhhCCCCCeEEeCcccCCHHHhhCCCcee-----------C-CCCCCC----CCCcc-CCCHHHH
Confidence 34555567889999998 699999 999855433 111110 1 222232 22111 1222333
Q ss_pred HHHHHh----hCcHHHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEEEecchhHHHHHHhhccccccCCCCCCCC
Q 012587 90 VDSLNC----ATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELPIKG 165 (460)
Q Consensus 90 ~~~~~~----~~~~~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 165 (460)
+..... ....+ ..+++++..+||+|+.-.-+. ...+|...|+|++.+.+.=.- +++.. ..+..+...
T Consensus 69 ~~~~~~gl~~~~~~~-~~~~~~~~~~p~~v~~~Gg~v-~~~aA~~~~~p~~~~~~~esn------~~~~~-~~~~~~~~~ 139 (396)
T TIGR03492 69 LRDLRAGLVGLTLGQ-WRALRKWAKKGDLIVAVGDIV-PLLFAWLSGKPYAFVGTAKSD------YYWES-GPRRSPSDE 139 (396)
T ss_pred HHHHHhhHHHHHHHH-HHHHHHHhhcCCEEEEECcHH-HHHHHHHcCCCceEEEeeccc------eeecC-CCCCccchh
Confidence 333222 12222 334444324899999776555 888899999999995553111 11100 000000000
Q ss_pred CccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCCCceeEeCccccccccCCCcccc
Q 012587 166 FLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPNIYSIGPLNAHLKVRIPEKTY 245 (460)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~ 245 (460)
|.++.. .....+ + ..+ -....++.++...-. ..++.+. ..-++.++|-...+.-..
T Consensus 140 ~~~~~G--------~~~~p~-e-~n~--l~~~~a~~v~~~~~~-----t~~~l~~-~g~k~~~vGnPv~d~l~~------ 195 (396)
T TIGR03492 140 YHRLEG--------SLYLPW-E-RWL--MRSRRCLAVFVRDRL-----TARDLRR-QGVRASYLGNPMMDGLEP------ 195 (396)
T ss_pred hhccCC--------CccCHH-H-HHH--hhchhhCEEeCCCHH-----HHHHHHH-CCCeEEEeCcCHHhcCcc------
Confidence 011100 001111 1 011 111444554444421 2222233 334799999554332210
Q ss_pred CCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhC----CCcEEEEEccCCCCCCCCCCCCchHH
Q 012587 246 SSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHS----KKSFLWVIRPDLISGKDGENQIPEEL 321 (460)
Q Consensus 246 ~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~----~~~~i~~~~~~~~~~~~~~~~~~~~~ 321 (460)
.... . + .+++++|.+-.||....-.+.+..+.++++.+ +..+++.+.++. .. +.+
T Consensus 196 -------~~~~--~-l--~~~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~~~~~~v~~~~~~~--------~~-~~~ 254 (396)
T TIGR03492 196 -------PERK--P-L--LTGRFRIALLPGSRPPEAYRNLKLLLRALEALPDSQPFVFLAAIVPSL--------SL-EKL 254 (396)
T ss_pred -------cccc--c-c--CCCCCEEEEECCCCHHHHHccHHHHHHHHHHHhhCCCeEEEEEeCCCC--------CH-HHH
Confidence 0000 1 2 22567898999998644444455566666554 566777763221 01 111
Q ss_pred HHHhc-------------------CCceeeeec-ChHhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhH
Q 012587 322 LEATK-------------------ERGCIAGWV-PQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINS 381 (460)
Q Consensus 322 ~~~~~-------------------~n~~~~~~v-p~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na 381 (460)
.+... +++.+..+. ...++++.+++ +|+-+|..| .|+..+|+|+|++|....|. |+
T Consensus 255 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~ADl--vI~rSGt~T-~E~a~lg~P~Ilip~~~~q~-na 330 (396)
T TIGR03492 255 QAILEDLGWQLEGSSEDQTSLFQKGTLEVLLGRGAFAEILHWADL--GIAMAGTAT-EQAVGLGKPVIQLPGKGPQF-TY 330 (396)
T ss_pred HHHHHhcCceecCCccccchhhccCceEEEechHhHHHHHHhCCE--EEECcCHHH-HHHHHhCCCEEEEeCCCCHH-HH
Confidence 11111 124454554 34788999998 999999766 99999999999999766676 98
Q ss_pred HHHHhhh----ceeeeecCCcchHHHHHHHHHHHhHhHHHHHHHH
Q 012587 382 RFVGEVW----KLGLDIKDLCDRNIVEKAVNDLMVERKEEFMESA 422 (460)
Q Consensus 382 ~~~~e~~----G~g~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~a 422 (460)
... ++. |.++.+ .+.+.+.|.+++.++++| ++..++.
T Consensus 331 ~~~-~~~~~l~g~~~~l-~~~~~~~l~~~l~~ll~d--~~~~~~~ 371 (396)
T TIGR03492 331 GFA-EAQSRLLGGSVFL-ASKNPEQAAQVVRQLLAD--PELLERC 371 (396)
T ss_pred HHH-HhhHhhcCCEEec-CCCCHHHHHHHHHHHHcC--HHHHHHH
Confidence 766 342 666666 345669999999999987 6554433
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.37 E-value=3.2e-09 Score=103.02 Aligned_cols=329 Identities=14% Similarity=0.133 Sum_probs=170.6
Q ss_pred EEEEEcC---CC-CCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCCC
Q 012587 8 HVAILPL---PA-VGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTP 83 (460)
Q Consensus 8 ~il~~~~---~~-~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (460)
||++++. |. .|+...+..|+++|.++||+|++++........ .. .....+..+.. +...
T Consensus 1 kIl~i~~~~~p~~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~-~~----------~~~~~~~~~~~--~~~~---- 63 (364)
T cd03814 1 RIAIVTDTFLPQVNGVVRTLQRLVEHLRARGHEVLVIAPGPFRESE-GP----------ARVVPVPSVPL--PGYP---- 63 (364)
T ss_pred CeEEEecccCccccceehHHHHHHHHHHHCCCEEEEEeCCchhhcc-CC----------CCceeeccccc--Cccc----
Confidence 4555542 22 789999999999999999999999974421111 00 00011111110 0000
Q ss_pred CChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcc---hHHHHHHHhCCceEEEecchhHHHHHHhhccccccCCC
Q 012587 84 DKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS---RAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGE 160 (460)
Q Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~---~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~ 160 (460)
.....+ .....+...+++. +||+|++..... .+..++...++|++......... .......
T Consensus 64 -~~~~~~-----~~~~~~~~~~~~~--~pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~------- 127 (364)
T cd03814 64 -EIRLAL-----PPRRRVRRLLDAF--APDVVHIATPGPLGLAALRAARRLGIPVVTSYHTDFPE-YLRYYGL------- 127 (364)
T ss_pred -ceEecc-----cchhhHHHHHHhc--CCCEEEEeccchhhHHHHHHHHHcCCCEEEEEecChHH-Hhhhccc-------
Confidence 000000 0123345555665 999998764432 46777888999998765432111 0000000
Q ss_pred CCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCCCceeEeCccccccccCC
Q 012587 161 LPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPNIYSIGPLNAHLKVRI 240 (460)
Q Consensus 161 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~~~~~~vG~~~~~~~~~~ 240 (460)
...........+.. ...++.+++.+....+ ........++..+..........
T Consensus 128 -------------------~~~~~~~~~~~~~~--~~~~d~i~~~s~~~~~-----~~~~~~~~~~~~~~~g~~~~~~~- 180 (364)
T cd03814 128 -------------------GPLSWLAWAYLRWF--HNRADRVLVPSPSLAD-----ELRARGFRRVRLWPRGVDTELFH- 180 (364)
T ss_pred -------------------chHhHhhHHHHHHH--HHhCCEEEeCCHHHHH-----HHhccCCCceeecCCCccccccC-
Confidence 00001111122211 2557777777765433 11210223444433322111100
Q ss_pred CccccCCCCccccchhhhhhhhcCCCCcEEEEEecCccc-CCHHHHHHHHHHHhhC-CCcEEEEEccCCCCCCCCCCCCc
Q 012587 241 PEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAV-MSRDQLIEFYYGLVHS-KKSFLWVIRPDLISGKDGENQIP 318 (460)
Q Consensus 241 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~-~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~ 318 (460)
+.. ........+- ..++.+++..|+... ...+.+..++..+... +..+++.-.+. ..
T Consensus 181 ~~~--------~~~~~~~~~~---~~~~~~i~~~G~~~~~k~~~~~i~~~~~l~~~~~~~l~i~G~~~----------~~ 239 (364)
T cd03814 181 PRR--------RDEALRARLG---PPDRPVLLYVGRLAPEKNLEALLDADLPLRRRPPVRLVIVGDGP----------AR 239 (364)
T ss_pred ccc--------ccHHHHHHhC---CCCCeEEEEEeccccccCHHHHHHHHHHhhhcCCceEEEEeCCc----------hH
Confidence 000 0011111121 133556677787653 2334444444444332 34554443211 11
Q ss_pred hHHHHHhcCCceeeeecChHh---hhcccccccccccCC----hhHHHHHHHhCCceecccccccchhhHHHHHhhhcee
Q 012587 319 EELLEATKERGCIAGWVPQEE---VLAHSAVGGFLTHCG----WNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLG 391 (460)
Q Consensus 319 ~~~~~~~~~n~~~~~~vp~~~---il~~~~~~~~I~HGG----~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g 391 (460)
..+. ...+|+.+.+|+++.+ ++..+++ +|+.+. .+++.||+++|+|+|+.+..+ +...+ +..+.|
T Consensus 240 ~~~~-~~~~~v~~~g~~~~~~~~~~~~~~d~--~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~----~~~~i-~~~~~g 311 (364)
T cd03814 240 ARLE-ARYPNVHFLGFLDGEELAAAYASADV--FVFPSRTETFGLVVLEAMASGLPVVAPDAGG----PADIV-TDGENG 311 (364)
T ss_pred HHHh-ccCCcEEEEeccCHHHHHHHHHhCCE--EEECcccccCCcHHHHHHHcCCCEEEcCCCC----chhhh-cCCcce
Confidence 1111 2457899999999654 7888887 776554 478999999999999887543 45556 456888
Q ss_pred eeecCCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHH
Q 012587 392 LDIKDLCDRNIVEKAVNDLMVERKEEFMESADRMANL 428 (460)
Q Consensus 392 ~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~ 428 (460)
... ...+.+++.+++.++++| ++.+++..+-+..
T Consensus 312 ~~~-~~~~~~~l~~~i~~l~~~--~~~~~~~~~~~~~ 345 (364)
T cd03814 312 LLV-EPGDAEAFAAALAALLAD--PELRRRMAARARA 345 (364)
T ss_pred EEc-CCCCHHHHHHHHHHHHcC--HHHHHHHHHHHHH
Confidence 877 556788899999999997 6655544443333
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.36 E-value=8.5e-11 Score=103.83 Aligned_cols=294 Identities=15% Similarity=0.168 Sum_probs=182.9
Q ss_pred cEEEEEcCC----CCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCC
Q 012587 7 VHVAILPLP----AVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRT 82 (460)
Q Consensus 7 ~~il~~~~~----~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (460)
|||+|.+-+ +.||+.+++.||++|.++|-.++|++.+...+.+-+. +.++.+. ..
T Consensus 1 M~V~i~~Dgg~~iGmGHV~R~l~LA~~l~k~~~~~~fl~k~~~e~~~~~~----------~~~f~~~-------~~---- 59 (318)
T COG3980 1 MKVLIRCDGGLEIGMGHVMRTLTLARELEKRGFACLFLTKQDIEAIIHKV----------YEGFKVL-------EG---- 59 (318)
T ss_pred CcEEEEecCCcccCcchhhhHHHHHHHHHhcCceEEEecccchhhhhhhh----------hhhccce-------ee----
Confidence 689998875 6899999999999999999999999986644433221 1111111 00
Q ss_pred CCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcc---hHHHHHHHhCCceEEEecchhHHHHHHhhccccccCC
Q 012587 83 PDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS---RAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAG 159 (460)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~---~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 159 (460)
.. ...+++- ++|++|.|.+.. -...+.++.|.+.+.+..-.........
T Consensus 60 ----------------~~-~n~ik~~--k~d~lI~Dsygl~~dd~k~ik~e~~~k~l~fDd~~~~~~~d~d--------- 111 (318)
T COG3980 60 ----------------RG-NNLIKEE--KFDLLIFDSYGLNADDFKLIKEEAGSKILIFDDENAKSFKDND--------- 111 (318)
T ss_pred ----------------ec-ccccccc--cCCEEEEeccCCCHHHHHHHHHHhCCcEEEecCCCccchhhhH---------
Confidence 00 1144554 999999999887 3577888999999998664322211000
Q ss_pred CCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCCCceeEeCccccccccC
Q 012587 160 ELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPNIYSIGPLNAHLKVR 239 (460)
Q Consensus 160 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~~~~~~vG~~~~~~~~~ 239 (460)
.......+ -+..+.+.+. ...++.||-......
T Consensus 112 ------------------------~ivN~~~~------------a~~~y~~v~~----------k~~~~lGp~y~~lr~- 144 (318)
T COG3980 112 ------------------------LIVNAILN------------ANDYYGLVPN----------KTRYYLGPGYAPLRP- 144 (318)
T ss_pred ------------------------hhhhhhhc------------chhhccccCc----------ceEEEecCCceeccH-
Confidence 00000000 0111111000 113666765543221
Q ss_pred CCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCch
Q 012587 240 IPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPE 319 (460)
Q Consensus 240 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~ 319 (460)
.|....+ +-+. + ++.-|+|++|..- ..+..-+++..+.+.++.+-+++++. .....
T Consensus 145 ---------eF~~~r~---~~~~-r-~~r~ilI~lGGsD--pk~lt~kvl~~L~~~~~nl~iV~gs~--------~p~l~ 200 (318)
T COG3980 145 ---------EFYALRE---ENTE-R-PKRDILITLGGSD--PKNLTLKVLAELEQKNVNLHIVVGSS--------NPTLK 200 (318)
T ss_pred ---------HHHHhHH---HHhh-c-chheEEEEccCCC--hhhhHHHHHHHhhccCeeEEEEecCC--------Ccchh
Confidence 1111111 1122 1 3455999999652 34566778888888887776666421 12233
Q ss_pred HHHHH--hcCCceeeeecC-hHhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecC
Q 012587 320 ELLEA--TKERGCIAGWVP-QEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKD 396 (460)
Q Consensus 320 ~~~~~--~~~n~~~~~~vp-~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~ 396 (460)
+++.+ ..+|+.+..... ...++..|++ .|+-||. |+.|++..|+|.+++|....|---|... +.+|+-..+.-
T Consensus 201 ~l~k~~~~~~~i~~~~~~~dma~LMke~d~--aI~AaGs-tlyEa~~lgvP~l~l~~a~NQ~~~a~~f-~~lg~~~~l~~ 276 (318)
T COG3980 201 NLRKRAEKYPNINLYIDTNDMAELMKEADL--AISAAGS-TLYEALLLGVPSLVLPLAENQIATAKEF-EALGIIKQLGY 276 (318)
T ss_pred HHHHHHhhCCCeeeEecchhHHHHHHhcch--heeccch-HHHHHHHhcCCceEEeeeccHHHHHHHH-HhcCchhhccC
Confidence 33322 345777765555 5778899997 8888775 8999999999999999999999999999 57788777752
Q ss_pred CcchHHHHHHHHHHHhHhHHHHHHHHHHHH
Q 012587 397 LCDRNIVEKAVNDLMVERKEEFMESADRMA 426 (460)
Q Consensus 397 ~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~ 426 (460)
.++.......+.++..| ...|.+...-.
T Consensus 277 ~l~~~~~~~~~~~i~~d--~~~rk~l~~~~ 304 (318)
T COG3980 277 HLKDLAKDYEILQIQKD--YARRKNLSFGS 304 (318)
T ss_pred CCchHHHHHHHHHhhhC--HHHhhhhhhcc
Confidence 46777777778888877 66666654433
|
|
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=99.35 E-value=7.1e-09 Score=104.50 Aligned_cols=328 Identities=16% Similarity=0.127 Sum_probs=165.0
Q ss_pred CCCcEEEEEcCCC-----CCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCC
Q 012587 4 QDHVHVAILPLPA-----VGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRD 78 (460)
Q Consensus 4 ~~~~~il~~~~~~-----~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (460)
.++|||+++..++ .|=-..+..+++.|.++||+|++++...... .+ ..++.+..... ++..
T Consensus 56 ~~~mrI~~~~~~~~~~~~gG~~~~~~~l~~~L~~~G~eV~vlt~~~~~~--~~-----------~~g~~v~~~~~-~~~~ 121 (465)
T PLN02871 56 SRPRRIALFVEPSPFSYVSGYKNRFQNFIRYLREMGDEVLVVTTDEGVP--QE-----------FHGAKVIGSWS-FPCP 121 (465)
T ss_pred CCCceEEEEECCcCCcccccHHHHHHHHHHHHHHCCCeEEEEecCCCCC--cc-----------ccCceeeccCC-cCCc
Confidence 4568999886543 3545678999999999999999999744221 01 11233322111 0000
Q ss_pred CCCCCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcc---hHHHHHHHhCCceEEEecchhHHHHHHhhcccc
Q 012587 79 HPRTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS---RAIDAAREVGVSIIYFRTISACAFWSFHCIPDI 155 (460)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~---~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~ 155 (460)
. ..... ..+ .....+..++++. +||+|.+..... .+..+|..+|+|+|......... ..+..
T Consensus 122 ~---~~~~~---~~~--~~~~~l~~~i~~~--kpDiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~~~-----~~~~~ 186 (465)
T PLN02871 122 F---YQKVP---LSL--ALSPRIISEVARF--KPDLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHVPV-----YIPRY 186 (465)
T ss_pred c---CCCce---eec--cCCHHHHHHHHhC--CCCEEEECCCchhHHHHHHHHHHhCCCEEEEEecCchh-----hhhcc
Confidence 0 00000 000 1222455667776 999997654322 35567889999998754321100 00000
Q ss_pred ccCCCCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcC---CCceeEeCcc
Q 012587 156 IDAGELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHS---CPNIYSIGPL 232 (460)
Q Consensus 156 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~---~~~~~~vG~~ 232 (460)
.... ....+. .+.+. ....++.+++.+...-+. +.... ..++..+..-
T Consensus 187 ---------------~~~~------~~~~~~-~~~r~--~~~~ad~ii~~S~~~~~~-----l~~~~~~~~~kv~vi~nG 237 (465)
T PLN02871 187 ---------------TFSW------LVKPMW-DIIRF--LHRAADLTLVTSPALGKE-----LEAAGVTAANRIRVWNKG 237 (465)
T ss_pred ---------------cchh------hHHHHH-HHHHH--HHhhCCEEEECCHHHHHH-----HHHcCCCCcCeEEEeCCc
Confidence 0000 000010 11111 125577777777532211 12101 1223322211
Q ss_pred ccccccCCCccccCCCCccccchhhh-hhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhC-CCcEEEEEccCCCCC
Q 012587 233 NAHLKVRIPEKTYSSSSLWKIDRSCM-AWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHS-KKSFLWVIRPDLISG 310 (460)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~l~-~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~ 310 (460)
....... |. ....+.. .+....++ ..+++..|++.. ...+..++++++.. +.+++++- .
T Consensus 238 vd~~~f~-p~---------~~~~~~~~~~~~~~~~-~~~i~~vGrl~~--~K~~~~li~a~~~~~~~~l~ivG-~----- 298 (465)
T PLN02871 238 VDSESFH-PR---------FRSEEMRARLSGGEPE-KPLIVYVGRLGA--EKNLDFLKRVMERLPGARLAFVG-D----- 298 (465)
T ss_pred cCccccC-Cc---------cccHHHHHHhcCCCCC-CeEEEEeCCCch--hhhHHHHHHHHHhCCCcEEEEEe-C-----
Confidence 1110000 00 0011111 12111123 344566687753 23355566777765 45555443 2
Q ss_pred CCCCCCCchHHHHH-hcCCceeeeecChH---hhhcccccccccccC---C-hhHHHHHHHhCCceecccccccchhhHH
Q 012587 311 KDGENQIPEELLEA-TKERGCIAGWVPQE---EVLAHSAVGGFLTHC---G-WNSTLESIVAGMPMICWPSFADQQINSR 382 (460)
Q Consensus 311 ~~~~~~~~~~~~~~-~~~n~~~~~~vp~~---~il~~~~~~~~I~HG---G-~gs~~eal~~GvP~l~~P~~~DQ~~na~ 382 (460)
| ...+.+.+. ...|+.+.+++++. .++..+++ +|.-. | ..++.||+++|+|+|+....+ ...
T Consensus 299 -G---~~~~~l~~~~~~~~V~f~G~v~~~ev~~~~~~aDv--~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg----~~e 368 (465)
T PLN02871 299 -G---PYREELEKMFAGTPTVFTGMLQGDELSQAYASGDV--FVMPSESETLGFVVLEAMASGVPVVAARAGG----IPD 368 (465)
T ss_pred -C---hHHHHHHHHhccCCeEEeccCCHHHHHHHHHHCCE--EEECCcccccCcHHHHHHHcCCCEEEcCCCC----cHh
Confidence 1 111222221 13478888999854 47788887 66432 2 357899999999999876432 233
Q ss_pred HHHhh---hceeeeecCCcchHHHHHHHHHHHhHhHHHHHHHH
Q 012587 383 FVGEV---WKLGLDIKDLCDRNIVEKAVNDLMVERKEEFMESA 422 (460)
Q Consensus 383 ~~~e~---~G~g~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~a 422 (460)
.+ +. -+.|..+ ..-+.+++.++|.++++| ++.+++.
T Consensus 369 iv-~~~~~~~~G~lv-~~~d~~~la~~i~~ll~~--~~~~~~~ 407 (465)
T PLN02871 369 II-PPDQEGKTGFLY-TPGDVDDCVEKLETLLAD--PELRERM 407 (465)
T ss_pred hh-hcCCCCCceEEe-CCCCHHHHHHHHHHHHhC--HHHHHHH
Confidence 34 33 4677777 445789999999999987 5544433
|
|
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.3e-08 Score=98.47 Aligned_cols=139 Identities=20% Similarity=0.164 Sum_probs=83.0
Q ss_pred CCcEEEEEecCcccC-CHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHh---hh
Q 012587 266 KQSVIYVSFGSIAVM-SRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEE---VL 341 (460)
Q Consensus 266 ~~~~V~vs~GS~~~~-~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~---il 341 (460)
..+.+++..|+.... ..+.+..++..+...+.++++.-... . ...........+++.+.+++++.+ ++
T Consensus 189 ~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~l~i~G~~~-------~-~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ 260 (359)
T cd03823 189 GGRLRFGFIGQLTPHKGVDLLLEAFKRLPRGDIELVIVGNGL-------E-LEEESYELEGDPRVEFLGAYPQEEIDDFY 260 (359)
T ss_pred CCceEEEEEecCccccCHHHHHHHHHHHHhcCcEEEEEcCch-------h-hhHHHHhhcCCCeEEEeCCCCHHHHHHHH
Confidence 446667778876532 23333333333333345555543211 0 000000001346888889997644 58
Q ss_pred cccccccccc----cCCh-hHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecCCcchHHHHHHHHHHHhHhHH
Q 012587 342 AHSAVGGFLT----HCGW-NSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVERKE 416 (460)
Q Consensus 342 ~~~~~~~~I~----HGG~-gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~~~~~ 416 (460)
..+++ +|+ ..|. .++.||+++|+|+|+.+. ..+...+ +..+.|..+ ..-+.+++.+++.++++| +
T Consensus 261 ~~ad~--~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i-~~~~~g~~~-~~~d~~~l~~~i~~l~~~--~ 330 (359)
T cd03823 261 AEIDV--LVVPSIWPENFPLVIREALAAGVPVIASDI----GGMAELV-RDGVNGLLF-PPGDAEDLAAALERLIDD--P 330 (359)
T ss_pred HhCCE--EEEcCcccCCCChHHHHHHHCCCCEEECCC----CCHHHHh-cCCCcEEEE-CCCCHHHHHHHHHHHHhC--h
Confidence 88887 552 2344 589999999999998754 3455566 454567777 445689999999999987 5
Q ss_pred HHHHHH
Q 012587 417 EFMESA 422 (460)
Q Consensus 417 ~~~~~a 422 (460)
..++..
T Consensus 331 ~~~~~~ 336 (359)
T cd03823 331 DLLERL 336 (359)
T ss_pred HHHHHH
Confidence 544443
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=2.8e-08 Score=98.71 Aligned_cols=81 Identities=11% Similarity=0.110 Sum_probs=57.0
Q ss_pred CCceeeeecChH---hhhcccccccccccCCh------hHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecCC
Q 012587 327 ERGCIAGWVPQE---EVLAHSAVGGFLTHCGW------NSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDL 397 (460)
Q Consensus 327 ~n~~~~~~vp~~---~il~~~~~~~~I~HGG~------gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~ 397 (460)
+|+.+.+|+|+. .++..+++-++.+..+. +.+.|++++|+|+|+....+. .....+ + +.|..+ ..
T Consensus 284 ~~v~f~G~~~~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~--~~~~~i-~--~~G~~~-~~ 357 (412)
T PRK10307 284 PNVHFLPLQPYDRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGT--ELGQLV-E--GIGVCV-EP 357 (412)
T ss_pred CceEEeCCCCHHHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCc--hHHHHH-h--CCcEEe-CC
Confidence 478888999864 46788887444444332 347899999999999864331 112233 3 678777 44
Q ss_pred cchHHHHHHHHHHHhH
Q 012587 398 CDRNIVEKAVNDLMVE 413 (460)
Q Consensus 398 ~~~~~l~~~i~~~l~~ 413 (460)
-+.++|.++|.++++|
T Consensus 358 ~d~~~la~~i~~l~~~ 373 (412)
T PRK10307 358 ESVEALVAAIAALARQ 373 (412)
T ss_pred CCHHHHHHHHHHHHhC
Confidence 6789999999999986
|
|
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.20 E-value=2.2e-08 Score=97.78 Aligned_cols=345 Identities=18% Similarity=0.075 Sum_probs=168.9
Q ss_pred EEEEEcCCC----CCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCCC
Q 012587 8 HVAILPLPA----VGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTP 83 (460)
Q Consensus 8 ~il~~~~~~----~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (460)
||++++... .|+-.....++++|+++||+|++++.................. ..++.+..++......
T Consensus 1 kIl~i~~~~~~~~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~----- 72 (394)
T cd03794 1 KILILSQYFPPELGGGAFRTTELAEELVKRGHEVTVITGSPNYPSGKIYKGYKREE---VDGVRVHRVPLPPYKK----- 72 (394)
T ss_pred CEEEEecccCCccCCcceeHHHHHHHHHhCCceEEEEecCCCcccccccccceEEe---cCCeEEEEEecCCCCc-----
Confidence 577776643 4899999999999999999999999744322221100000000 2345555554321111
Q ss_pred CChHHHHHHHHhhCcHHHHHHH-HcCCCCccEEEEcCCcc----hHHHHHHHhCCceEEEecchhHHHHHHhhccccccC
Q 012587 84 DKFPELVDSLNCATPPLLKEMV-SDSKSPVNCIITDGYMS----RAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDA 158 (460)
Q Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~-~~~~~~pD~vv~D~~~~----~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 158 (460)
......+.............+. +. .+||+|+...... .+..++...++|++............... .
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~--~---- 144 (394)
T cd03794 73 NGLLKRLLNYLSFALSALLALLKRR--RRPDVIIATSPPLLIALAALLLARLKGAPFVLEVRDLWPESAVALG--L---- 144 (394)
T ss_pred cchHHHHHhhhHHHHHHHHHHHhcc--cCCCEEEEcCChHHHHHHHHHHHHhcCCCEEEEehhhcchhHHHcc--C----
Confidence 1111111111111112222232 23 4999999886222 34555666799998865432110000000 0
Q ss_pred CCCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHh-hcCC-CceeEeCcccccc
Q 012587 159 GELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIR-NHSC-PNIYSIGPLNAHL 236 (460)
Q Consensus 159 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~-~~~~-~~~~~vG~~~~~~ 236 (460)
...............+. ....++.++..+....+. .. .... .++..+.......
T Consensus 145 -----------------~~~~~~~~~~~~~~~~~--~~~~~d~vi~~s~~~~~~-----~~~~~~~~~~~~~i~~~~~~~ 200 (394)
T cd03794 145 -----------------LKNGSLLYRLLRKLERL--IYRRADAIVVISPGMREY-----LVRRGVPPEKISVIPNGVDLE 200 (394)
T ss_pred -----------------ccccchHHHHHHHHHHH--HHhcCCEEEEECHHHHHH-----HHhcCCCcCceEEcCCCCCHH
Confidence 00000000111222211 235667777777543221 11 1011 3444444333221
Q ss_pred ccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCccc-CCHHHHHHHHHHHhhC-CCcEEEEEccCCCCCCCCC
Q 012587 237 KVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAV-MSRDQLIEFYYGLVHS-KKSFLWVIRPDLISGKDGE 314 (460)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~-~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~ 314 (460)
..... .......... ...++.+++..|+... ...+.+...+..+.+. +.++++. +.+ .
T Consensus 201 ~~~~~----------~~~~~~~~~~--~~~~~~~i~~~G~~~~~k~~~~l~~~~~~l~~~~~~~l~i~-G~~------~- 260 (394)
T cd03794 201 LFKPP----------PADESLRKEL--GLDDKFVVLYAGNIGRAQGLDTLLEAAALLKDRPDIRFLIV-GDG------P- 260 (394)
T ss_pred HcCCc----------cchhhhhhcc--CCCCcEEEEEecCcccccCHHHHHHHHHHHhhcCCeEEEEe-CCc------c-
Confidence 11000 0000011111 2245667788888753 2334444444444433 4454443 211 1
Q ss_pred CCCchHHH----HHhcCCceeeeecChH---hhhcccccccccccCC---------hhHHHHHHHhCCceecccccccch
Q 012587 315 NQIPEELL----EATKERGCIAGWVPQE---EVLAHSAVGGFLTHCG---------WNSTLESIVAGMPMICWPSFADQQ 378 (460)
Q Consensus 315 ~~~~~~~~----~~~~~n~~~~~~vp~~---~il~~~~~~~~I~HGG---------~gs~~eal~~GvP~l~~P~~~DQ~ 378 (460)
..+.+. ....+|+.+.+++++. .++..+++ +|.... -+++.||+++|+|+|+.+..+.+.
T Consensus 261 --~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di--~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~ 336 (394)
T cd03794 261 --EKEELKELAKALGLDNVTFLGRVPKEELPELLAAADV--GLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAE 336 (394)
T ss_pred --cHHHHHHHHHHcCCCcEEEeCCCChHHHHHHHHhhCe--eEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchh
Confidence 112221 1234688888999865 46778887 553221 345899999999999988654433
Q ss_pred hhHHHHHhhhceeeeecCCcchHHHHHHHHHHHhHhHHHHHHHHHH
Q 012587 379 INSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVERKEEFMESADR 424 (460)
Q Consensus 379 ~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~a~~ 424 (460)
.+ ...+.|..+ ...+.+++.+++.++++| +..+++..+
T Consensus 337 ----~~-~~~~~g~~~-~~~~~~~l~~~i~~~~~~--~~~~~~~~~ 374 (394)
T cd03794 337 ----LV-EEAGAGLVV-PPGDPEALAAAILELLDD--PEERAEMGE 374 (394)
T ss_pred ----hh-ccCCcceEe-CCCCHHHHHHHHHHHHhC--hHHHHHHHH
Confidence 33 233667766 334889999999999986 555544433
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.18 E-value=4.6e-08 Score=94.27 Aligned_cols=319 Identities=16% Similarity=0.083 Sum_probs=164.6
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCCCCChH
Q 012587 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPDKFP 87 (460)
Q Consensus 8 ~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (460)
||++++....|+......++++|.++||+|++++.......... ..++.+..++.... .....
T Consensus 1 kIl~i~~~~~g~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~------~~~~~ 63 (359)
T cd03808 1 KILHIVTVDGGLYSFRLPLIKALRAAGYEVHVVAPPGDELEELE-----------ALGVKVIPIPLDRR------GINPF 63 (359)
T ss_pred CeeEEEecchhHHHHHHHHHHHHHhcCCeeEEEecCCCcccccc-----------cCCceEEecccccc------ccChH
Confidence 68888888888999999999999999999999997544332111 22456555543210 01111
Q ss_pred HHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcc--hHHHHHHHhCCceEEEecchhHHHHHHhhccccccCCCCCCCC
Q 012587 88 ELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS--RAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELPIKG 165 (460)
Q Consensus 88 ~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 165 (460)
..+... ..+...++.. +||+|++..... .+..++...+.|.+........... . .
T Consensus 64 ~~~~~~-----~~~~~~~~~~--~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~--~----------- 120 (359)
T cd03808 64 KDLKAL-----LRLYRLLRKE--RPDIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVF---T--S----------- 120 (359)
T ss_pred hHHHHH-----HHHHHHHHhc--CCCEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhh---c--c-----------
Confidence 111111 2345566665 999998875433 3444455456665554332111000 0 0
Q ss_pred CccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCC---CceeEeCccccccccCCCc
Q 012587 166 FLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSC---PNIYSIGPLNAHLKVRIPE 242 (460)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~---~~~~~vG~~~~~~~~~~~~ 242 (460)
. ...........+.. ....+.+++.+....+. ...... ...+.+.+........
T Consensus 121 --------~-----~~~~~~~~~~~~~~--~~~~d~ii~~s~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~--- 177 (359)
T cd03808 121 --------G-----GLKRRLYLLLERLA--LRFTDKVIFQNEDDRDL-----ALKLGIIKKKKTVLIPGSGVDLDRF--- 177 (359)
T ss_pred --------c-----hhHHHHHHHHHHHH--HhhccEEEEcCHHHHHH-----HHHhcCCCcCceEEecCCCCChhhc---
Confidence 0 00011111122111 24456777777543221 111011 1222222222111100
Q ss_pred cccCCCCccccchhhhhhhhc-CCCCcEEEEEecCccc-CCHHHHHHHHHHHhhC--CCcEEEEEccCCCCCCCCCCCCc
Q 012587 243 KTYSSSSLWKIDRSCMAWLDK-QPKQSVIYVSFGSIAV-MSRDQLIEFYYGLVHS--KKSFLWVIRPDLISGKDGENQIP 318 (460)
Q Consensus 243 ~~~~~~~~~~~~~~l~~~l~~-~~~~~~V~vs~GS~~~-~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~~~ 318 (460)
.. ... ..+++.+++..|+... ...+.+...+..+.+. +.++++.-... .....
T Consensus 178 ---------~~-------~~~~~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~i~G~~~-------~~~~~ 234 (359)
T cd03808 178 ---------SP-------SPEPIPEDDPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLLLVGDGD-------EENPA 234 (359)
T ss_pred ---------Cc-------cccccCCCCcEEEEEeccccccCHHHHHHHHHHHHhcCCCeEEEEEcCCC-------cchhh
Confidence 00 000 1245667788887653 2334444444444432 34444443211 10111
Q ss_pred hH--HHH-HhcCCceeeeecC-hHhhhcccccccccccC----ChhHHHHHHHhCCceecccccccchhhHHHHHhhhce
Q 012587 319 EE--LLE-ATKERGCIAGWVP-QEEVLAHSAVGGFLTHC----GWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKL 390 (460)
Q Consensus 319 ~~--~~~-~~~~n~~~~~~vp-~~~il~~~~~~~~I~HG----G~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~ 390 (460)
.. ..+ ...+++.+.++.. ...++..+++ +|.-. -.+++.||+++|+|+|+.+.. .+...+ +..+.
T Consensus 235 ~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adi--~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~----~~~~~i-~~~~~ 307 (359)
T cd03808 235 AILEIEKLGLEGRVEFLGFRDDVPELLAAADV--FVLPSYREGLPRVLLEAMAMGRPVIATDVP----GCREAV-IDGVN 307 (359)
T ss_pred HHHHHHhcCCcceEEEeeccccHHHHHHhccE--EEecCcccCcchHHHHHHHcCCCEEEecCC----Cchhhh-hcCcc
Confidence 10 111 1235677777654 4778888887 66433 257899999999999986543 334455 34467
Q ss_pred eeeecCCcchHHHHHHHHHHHhHhHHHHHHHH
Q 012587 391 GLDIKDLCDRNIVEKAVNDLMVERKEEFMESA 422 (460)
Q Consensus 391 g~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~a 422 (460)
|... ..-+.+++.+++.++++| ++..++.
T Consensus 308 g~~~-~~~~~~~~~~~i~~l~~~--~~~~~~~ 336 (359)
T cd03808 308 GFLV-PPGDAEALADAIERLIED--PELRARM 336 (359)
T ss_pred eEEE-CCCCHHHHHHHHHHHHhC--HHHHHHH
Confidence 7776 445789999999999887 5544443
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.16 E-value=8.6e-08 Score=93.66 Aligned_cols=85 Identities=19% Similarity=0.260 Sum_probs=60.0
Q ss_pred cCCceeeeecCh-Hhhhcccccccccc---c-CChhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecCCcch
Q 012587 326 KERGCIAGWVPQ-EEVLAHSAVGGFLT---H-CGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDR 400 (460)
Q Consensus 326 ~~n~~~~~~vp~-~~il~~~~~~~~I~---H-GG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~~ 400 (460)
.+++.+.++.++ ..++..+++ +|. . |...++.||+++|+|+|+... ...+..+ +.-..|... ...+.
T Consensus 252 ~~~v~~~g~~~~~~~~~~~~d~--~v~ps~~E~~~~~~~EAma~g~PvI~s~~----~~~~e~i-~~~~~G~~~-~~~~~ 323 (371)
T cd04962 252 QDDVLFLGKQDHVEELLSIADL--FLLPSEKESFGLAALEAMACGVPVVASNA----GGIPEVV-KHGETGFLV-DVGDV 323 (371)
T ss_pred CceEEEecCcccHHHHHHhcCE--EEeCCCcCCCccHHHHHHHcCCCEEEeCC----CCchhhh-cCCCceEEc-CCCCH
Confidence 357777787764 778888887 552 2 334599999999999998643 3455555 343567666 44578
Q ss_pred HHHHHHHHHHHhHhHHHHHH
Q 012587 401 NIVEKAVNDLMVERKEEFME 420 (460)
Q Consensus 401 ~~l~~~i~~~l~~~~~~~~~ 420 (460)
+++.+++.+++++ +..++
T Consensus 324 ~~l~~~i~~l~~~--~~~~~ 341 (371)
T cd04962 324 EAMAEYALSLLED--DELWQ 341 (371)
T ss_pred HHHHHHHHHHHhC--HHHHH
Confidence 9999999999986 55433
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.11 E-value=2.5e-08 Score=97.30 Aligned_cols=326 Identities=13% Similarity=0.078 Sum_probs=165.4
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhC-CCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCCCCC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHA-GIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPDK 85 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~r-GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (460)
|||++ -.+++-|+.=+.+|.++|.++ +.++.++.+....+...+.... + ++.. .++ +..+. ...+
T Consensus 1 ~~i~~-~~gtr~~~~~~~p~~~~l~~~~~~~~~~~~tg~h~~~~~~~~~~-~-------~i~~-~~~--~~~~~--~~~~ 66 (365)
T TIGR00236 1 LKVSI-VLGTRPEAIKMAPLIRALKKYPEIDSYVIVTAQHREMLDQVLDL-F-------HLPP-DYD--LNIMS--PGQT 66 (365)
T ss_pred CeEEE-EEecCHHHHHHHHHHHHHhhCCCCCEEEEEeCCCHHHHHHHHHh-c-------CCCC-Cee--eecCC--CCCC
Confidence 47775 457889999999999999987 5566666655555443332110 0 0110 000 00010 1122
Q ss_pred hHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcC--Cc-chHHHHHHHhCCceEEEecchhHHHHHHhhccccccCCCCC
Q 012587 86 FPELVDSLNCATPPLLKEMVSDSKSPVNCIITDG--YM-SRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELP 162 (460)
Q Consensus 86 ~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~--~~-~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p 162 (460)
....... ....+.+++++. +||+|++-. .. .++..+|..+|||++.+.-.. ..... +.+
T Consensus 67 ~~~~~~~----~~~~l~~~l~~~--~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~-------~s~~~-----~~~ 128 (365)
T TIGR00236 67 LGEITSN----MLEGLEELLLEE--KPDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGL-------RTGDR-----YSP 128 (365)
T ss_pred HHHHHHH----HHHHHHHHHHHc--CCCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCC-------CcCCC-----CCC
Confidence 2222222 225667788887 999998763 22 257889999999998653210 00000 000
Q ss_pred CCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhh-cCC-CceeEeCccccccccCC
Q 012587 163 IKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRN-HSC-PNIYSIGPLNAHLKVRI 240 (460)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~-~~~-~~~~~vG~~~~~~~~~~ 240 (460)
..+...+.... ..++.++..+-.. .+.+.. ... .+++.+|-.........
T Consensus 129 ------------------~~~~~~r~~~~-----~~ad~~~~~s~~~-----~~~l~~~G~~~~~I~vign~~~d~~~~~ 180 (365)
T TIGR00236 129 ------------------MPEEINRQLTG-----HIADLHFAPTEQA-----KDNLLRENVKADSIFVTGNTVIDALLTN 180 (365)
T ss_pred ------------------CccHHHHHHHH-----HHHHhccCCCHHH-----HHHHHHcCCCcccEEEeCChHHHHHHHH
Confidence 00111111111 1123333333211 111111 011 35777775432111000
Q ss_pred CccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhC-----CCcEEEEEccCCCCCCCCCC
Q 012587 241 PEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHS-----KKSFLWVIRPDLISGKDGEN 315 (460)
Q Consensus 241 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~~ 315 (460)
... ....++.+.+. .++++|+++.+-..... ..+..++++++++ +.++++...++ .
T Consensus 181 ~~~--------~~~~~~~~~~~--~~~~~vl~~~hr~~~~~-k~~~~ll~a~~~l~~~~~~~~~vi~~~~~-------~- 241 (365)
T TIGR00236 181 VEI--------AYSSPVLSEFG--EDKRYILLTLHRRENVG-EPLENIFKAIREIVEEFEDVQIVYPVHLN-------P- 241 (365)
T ss_pred Hhh--------ccchhHHHhcC--CCCCEEEEecCchhhhh-hHHHHHHHHHHHHHHHCCCCEEEEECCCC-------h-
Confidence 000 00111222222 13466766654322211 2356666666553 45555553211 0
Q ss_pred CCchHHHHH--hcCCceeeeecCh---HhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHHHHHhhhce
Q 012587 316 QIPEELLEA--TKERGCIAGWVPQ---EEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKL 390 (460)
Q Consensus 316 ~~~~~~~~~--~~~n~~~~~~vp~---~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~ 390 (460)
.....+.+. ..+|+.+.+.+++ ..++..+++ +|+-.|.. +.||+++|+|+|.++..+++++ .+ + .|.
T Consensus 242 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~ad~--vv~~Sg~~-~~EA~a~g~PvI~~~~~~~~~e---~~-~-~g~ 313 (365)
T TIGR00236 242 VVREPLHKHLGDSKRVHLIEPLEYLDFLNLAANSHL--ILTDSGGV-QEEAPSLGKPVLVLRDTTERPE---TV-E-AGT 313 (365)
T ss_pred HHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhCCE--EEECChhH-HHHHHHcCCCEEECCCCCCChH---HH-h-cCc
Confidence 111112221 2357887776664 456677886 88877644 7999999999999976565552 22 2 476
Q ss_pred eeeecCCcchHHHHHHHHHHHhHhHHHHHHHHH
Q 012587 391 GLDIKDLCDRNIVEKAVNDLMVERKEEFMESAD 423 (460)
Q Consensus 391 g~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~a~ 423 (460)
+..+. .++++|.+++.++++| +..+++..
T Consensus 314 ~~lv~--~d~~~i~~ai~~ll~~--~~~~~~~~ 342 (365)
T TIGR00236 314 NKLVG--TDKENITKAAKRLLTD--PDEYKKMS 342 (365)
T ss_pred eEEeC--CCHHHHHHHHHHHHhC--hHHHHHhh
Confidence 66552 5789999999999987 66665543
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.11 E-value=4.4e-07 Score=88.10 Aligned_cols=129 Identities=22% Similarity=0.264 Sum_probs=78.3
Q ss_pred CCcEEEEEecCcccC-CHHHHHHHHHHHhh--CCCcEEEEEccCCCCCCCCCCCCchHHHH-----HhcCCceeeeecCh
Q 012587 266 KQSVIYVSFGSIAVM-SRDQLIEFYYGLVH--SKKSFLWVIRPDLISGKDGENQIPEELLE-----ATKERGCIAGWVPQ 337 (460)
Q Consensus 266 ~~~~V~vs~GS~~~~-~~~~~~~~~~al~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-----~~~~n~~~~~~vp~ 337 (460)
+++.+++..|+.... ..+.+..++..+.. .+.++++.-.+ . ..+.+.+ ...+|+.+.+++|+
T Consensus 200 ~~~~~i~~~G~~~~~k~~~~l~~~~~~~~~~~~~~~l~i~G~~-------~---~~~~~~~~~~~~~~~~~v~~~g~~~~ 269 (374)
T cd03817 200 EDEPVLLYVGRLAKEKNIDFLIRAFARLLKEEPDVKLVIVGDG-------P---EREELEELARELGLADRVIFTGFVPR 269 (374)
T ss_pred CCCeEEEEEeeeecccCHHHHHHHHHHHHHhCCCeEEEEEeCC-------c---hHHHHHHHHHHcCCCCcEEEeccCCh
Confidence 345566777876532 33444444444443 23454444321 1 1112221 12468888899987
Q ss_pred Hh---hhccccccccccc----CChhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecCCcchHHHHHHHHHH
Q 012587 338 EE---VLAHSAVGGFLTH----CGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDL 410 (460)
Q Consensus 338 ~~---il~~~~~~~~I~H----GG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~ 410 (460)
.+ ++..+++ +|.- |...++.||+++|+|+|+... ...+..+ +..+.|..+.. .+. ++.+++.++
T Consensus 270 ~~~~~~~~~ad~--~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~----~~~~~~i-~~~~~g~~~~~-~~~-~~~~~i~~l 340 (374)
T cd03817 270 EELPDYYKAADL--FVFASTTETQGLVLLEAMAAGLPVVAVDA----PGLPDLV-ADGENGFLFPP-GDE-ALAEALLRL 340 (374)
T ss_pred HHHHHHHHHcCE--EEecccccCcChHHHHHHHcCCcEEEeCC----CChhhhe-ecCceeEEeCC-CCH-HHHHHHHHH
Confidence 54 6778887 5533 334789999999999998653 3345555 45567777742 222 899999999
Q ss_pred HhH
Q 012587 411 MVE 413 (460)
Q Consensus 411 l~~ 413 (460)
+++
T Consensus 341 ~~~ 343 (374)
T cd03817 341 LQD 343 (374)
T ss_pred HhC
Confidence 986
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.09 E-value=2.8e-07 Score=91.07 Aligned_cols=88 Identities=23% Similarity=0.215 Sum_probs=60.6
Q ss_pred cCCceeeeecChHh---hhcccccccccc-cCCh-hHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecCCcch
Q 012587 326 KERGCIAGWVPQEE---VLAHSAVGGFLT-HCGW-NSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDR 400 (460)
Q Consensus 326 ~~n~~~~~~vp~~~---il~~~~~~~~I~-HGG~-gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~~ 400 (460)
.+++.+.+++|+.+ ++..+++-++.+ +.|. .++.||+++|+|+|... .......+ +.-..|..+ ...+.
T Consensus 280 ~~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~----~~g~~e~i-~~~~~G~lv-~~~d~ 353 (396)
T cd03818 280 LSRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSD----TAPVREVI-TDGENGLLV-DFFDP 353 (396)
T ss_pred cceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcC----CCCchhhc-ccCCceEEc-CCCCH
Confidence 35788889999754 567888722222 2233 48999999999999864 33455555 343456666 44579
Q ss_pred HHHHHHHHHHHhHhHHHHHHH
Q 012587 401 NIVEKAVNDLMVERKEEFMES 421 (460)
Q Consensus 401 ~~l~~~i~~~l~~~~~~~~~~ 421 (460)
+++.++|.++++| ++.+++
T Consensus 354 ~~la~~i~~ll~~--~~~~~~ 372 (396)
T cd03818 354 DALAAAVIELLDD--PARRAR 372 (396)
T ss_pred HHHHHHHHHHHhC--HHHHHH
Confidence 9999999999997 554433
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.09 E-value=4.4e-07 Score=90.08 Aligned_cols=120 Identities=18% Similarity=0.069 Sum_probs=70.3
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCCCC
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPD 84 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (460)
++.||.+++....|+-..+..+|++|+++||+|++++.......-... . ..++.++.++..- .. ..
T Consensus 2 ~~~~~~~~~~~~~~~~~R~~~~a~~L~~~G~~V~ii~~~~~~~~~~~~-~--------~~~v~~~~~~~~~--~~---~~ 67 (415)
T cd03816 2 KRKRVCVLVLGDIGRSPRMQYHALSLAKHGWKVDLVGYLETPPHDEIL-S--------NPNITIHPLPPPP--QR---LN 67 (415)
T ss_pred CccEEEEEEecccCCCHHHHHHHHHHHhcCceEEEEEecCCCCCHHHh-c--------CCCEEEEECCCCc--cc---cc
Confidence 456899999988889899999999999999999999964321111100 0 3357777775311 00 11
Q ss_pred ChHHHHHH---HHhhCcHHHHHHHHcCCCCccEEEEcCCc-c----hHHHHHHHhCCceEEEec
Q 012587 85 KFPELVDS---LNCATPPLLKEMVSDSKSPVNCIITDGYM-S----RAIDAAREVGVSIIYFRT 140 (460)
Q Consensus 85 ~~~~~~~~---~~~~~~~~l~~~~~~~~~~pD~vv~D~~~-~----~~~~~A~~lgiP~v~~~~ 140 (460)
.....+.. ........+..+++. .+||+|++.... . .+..++...|+|+|....
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~Dvi~~~~~~~~~~~~~a~~~~~~~~~~~V~~~h 129 (415)
T cd03816 68 KLPFLLFAPLKVLWQFFSLLWLLYKL--RPADYILIQNPPSIPTLLIAWLYCLLRRTKLIIDWH 129 (415)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHhc--CCCCEEEEeCCCCchHHHHHHHHHHHhCCeEEEEcC
Confidence 11222211 111122333334444 389999875322 1 245556678999887533
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.09 E-value=2.4e-07 Score=91.34 Aligned_cols=84 Identities=20% Similarity=0.225 Sum_probs=61.9
Q ss_pred cCCceeeeecChHh---hhccccccccccc----CChhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecCCc
Q 012587 326 KERGCIAGWVPQEE---VLAHSAVGGFLTH----CGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLC 398 (460)
Q Consensus 326 ~~n~~~~~~vp~~~---il~~~~~~~~I~H----GG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~ 398 (460)
.+|+.+.+|+|+.+ ++..+++ +++. |-..++.||+++|+|+|+.... .....+ +..+.|... ...
T Consensus 282 ~~~v~~~g~~~~~~~~~~~~~adi--~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~----~~~e~i-~~~~~g~~~-~~~ 353 (398)
T cd03800 282 IDRVDFPGRVSREDLPALYRAADV--FVNPALYEPFGLTALEAMACGLPVVATAVG----GPRDIV-VDGVTGLLV-DPR 353 (398)
T ss_pred CceEEEeccCCHHHHHHHHHhCCE--EEecccccccCcHHHHHHhcCCCEEECCCC----CHHHHc-cCCCCeEEe-CCC
Confidence 36888899999755 4788887 6643 2236899999999999987643 344456 455678877 445
Q ss_pred chHHHHHHHHHHHhHhHHHHH
Q 012587 399 DRNIVEKAVNDLMVERKEEFM 419 (460)
Q Consensus 399 ~~~~l~~~i~~~l~~~~~~~~ 419 (460)
+.+++.++|.+++++ +..+
T Consensus 354 ~~~~l~~~i~~l~~~--~~~~ 372 (398)
T cd03800 354 DPEALAAALRRLLTD--PALR 372 (398)
T ss_pred CHHHHHHHHHHHHhC--HHHH
Confidence 799999999999986 5443
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.07 E-value=3.6e-07 Score=91.17 Aligned_cols=78 Identities=18% Similarity=0.186 Sum_probs=57.8
Q ss_pred Hhhhcccccccccc----cCChhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecCCcchHHHHHHHHHHHhH
Q 012587 338 EEVLAHSAVGGFLT----HCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVE 413 (460)
Q Consensus 338 ~~il~~~~~~~~I~----HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~~ 413 (460)
..+++.+++ +|+. =||..++.||+++|+|+|.-|...++.+....+ .+.|.++.. -+.++|.+++.++++|
T Consensus 314 ~~~y~~aDi-~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~-~~~g~~~~~---~d~~~La~~l~~ll~~ 388 (425)
T PRK05749 314 GLLYAIADI-AFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERL-LQAGAAIQV---EDAEDLAKAVTYLLTD 388 (425)
T ss_pred HHHHHhCCE-EEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHH-HHCCCeEEE---CCHHHHHHHHHHHhcC
Confidence 677788887 3342 134446999999999999999888888877776 355766655 3789999999999997
Q ss_pred hHHHHHHHH
Q 012587 414 RKEEFMESA 422 (460)
Q Consensus 414 ~~~~~~~~a 422 (460)
++.+++.
T Consensus 389 --~~~~~~m 395 (425)
T PRK05749 389 --PDARQAY 395 (425)
T ss_pred --HHHHHHH
Confidence 6554433
|
|
| >PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.6e-07 Score=88.70 Aligned_cols=301 Identities=15% Similarity=0.100 Sum_probs=160.8
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccch-hHHhhccccccccccCCCCceEEecCCCCCCCCCCCCCC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYY-DRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPDK 85 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (460)
|||.|--.-. -|+.-+..+.++|.++||+|.+.+-.... ..+.+.. ++++..+..- ..+
T Consensus 1 MkIwiDi~~p-~hvhfFk~~I~eL~~~GheV~it~R~~~~~~~LL~~y-----------g~~y~~iG~~--------g~~ 60 (335)
T PF04007_consen 1 MKIWIDITHP-AHVHFFKNIIRELEKRGHEVLITARDKDETEELLDLY-----------GIDYIVIGKH--------GDS 60 (335)
T ss_pred CeEEEECCCc-hHHHHHHHHHHHHHhCCCEEEEEEeccchHHHHHHHc-----------CCCeEEEcCC--------CCC
Confidence 5676654433 49999999999999999999999864332 2333433 3777776531 123
Q ss_pred hHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEEEecchhHHHHHHhhccccccCCCCCCCC
Q 012587 86 FPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELPIKG 165 (460)
Q Consensus 86 ~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 165 (460)
....+....... ..+..++++. +||++|+- ....+..+|.-+|+|+|.+.-+..........+|. ...-..|.
T Consensus 61 ~~~Kl~~~~~R~-~~l~~~~~~~--~pDv~is~-~s~~a~~va~~lgiP~I~f~D~e~a~~~~~Lt~Pl-a~~i~~P~-- 133 (335)
T PF04007_consen 61 LYGKLLESIERQ-YKLLKLIKKF--KPDVAISF-GSPEAARVAFGLGIPSIVFNDTEHAIAQNRLTLPL-ADVIITPE-- 133 (335)
T ss_pred HHHHHHHHHHHH-HHHHHHHHhh--CCCEEEec-CcHHHHHHHHHhCCCeEEEecCchhhccceeehhc-CCeeECCc--
Confidence 333333333322 3345555555 99999976 44568889999999999998764322111111110 00000000
Q ss_pred CccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEE-EcChhhhchhHHHHHhhcCCCceeEeCccccccccCCCccc
Q 012587 166 FLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLI-LNTFEDLEGPILSQIRNHSCPNIYSIGPLNAHLKVRIPEKT 244 (460)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~le~p~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~ 244 (460)
.+ . ......+. .+ ..+. ++.+.++ .++=|
T Consensus 134 ---------~~-----~----~~~~~~~G--~~-~~i~~y~G~~E~----------------ayl~~------------- 163 (335)
T PF04007_consen 134 ---------AI-----P----KEFLKRFG--AK-NQIRTYNGYKEL----------------AYLHP------------- 163 (335)
T ss_pred ---------cc-----C----HHHHHhcC--Cc-CCEEEECCeeeE----------------EeecC-------------
Confidence 00 0 00000000 11 1111 2332211 11111
Q ss_pred cCCCCccccchhhhhhhhcCCCCcEEEEEecCcc----cCCHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchH
Q 012587 245 YSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIA----VMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEE 320 (460)
Q Consensus 245 ~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~----~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 320 (460)
+.+++++.+-+. -.+++.|++-+-+.. ......+..+++.+++.+..+++.-... ..+.-
T Consensus 164 ------F~Pd~~vl~~lg-~~~~~yIvvR~~~~~A~y~~~~~~i~~~ii~~L~~~~~~vV~ipr~~---------~~~~~ 227 (335)
T PF04007_consen 164 ------FKPDPEVLKELG-LDDEPYIVVRPEAWKASYDNGKKSILPEIIEELEKYGRNVVIIPRYE---------DQREL 227 (335)
T ss_pred ------CCCChhHHHHcC-CCCCCEEEEEeccccCeeecCccchHHHHHHHHHhhCceEEEecCCc---------chhhH
Confidence 012333444444 225678888777643 2234557778889988887644333211 11111
Q ss_pred HHHHhcCCceee-eecChHhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecCCcc
Q 012587 321 LLEATKERGCIA-GWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCD 399 (460)
Q Consensus 321 ~~~~~~~n~~~~-~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~ 399 (460)
+ + .-++.+. .-+...++|.++++ +|+-|| ....||...|+|.+-+ +.++-...-+.+. +.|+-.+ ..+
T Consensus 228 ~-~--~~~~~i~~~~vd~~~Ll~~a~l--~Ig~gg-TMa~EAA~LGtPaIs~-~~g~~~~vd~~L~-~~Gll~~---~~~ 296 (335)
T PF04007_consen 228 F-E--KYGVIIPPEPVDGLDLLYYADL--VIGGGG-TMAREAALLGTPAISC-FPGKLLAVDKYLI-EKGLLYH---STD 296 (335)
T ss_pred H-h--ccCccccCCCCCHHHHHHhcCE--EEeCCc-HHHHHHHHhCCCEEEe-cCCcchhHHHHHH-HCCCeEe---cCC
Confidence 1 1 1123333 55666689999997 888777 7889999999999975 2223222335564 4566333 346
Q ss_pred hHHHHHHHHHHH
Q 012587 400 RNIVEKAVNDLM 411 (460)
Q Consensus 400 ~~~l~~~i~~~l 411 (460)
.+++.+.+.+.+
T Consensus 297 ~~ei~~~v~~~~ 308 (335)
T PF04007_consen 297 PDEIVEYVRKNL 308 (335)
T ss_pred HHHHHHHHHHhh
Confidence 666666554443
|
They are found in archaea and some bacteria and have no known function. |
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.04 E-value=6.8e-07 Score=86.93 Aligned_cols=83 Identities=14% Similarity=0.131 Sum_probs=58.8
Q ss_pred hcCCceeeeecC-hH---hhhccccccccccc----CChhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecC
Q 012587 325 TKERGCIAGWVP-QE---EVLAHSAVGGFLTH----CGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKD 396 (460)
Q Consensus 325 ~~~n~~~~~~vp-~~---~il~~~~~~~~I~H----GG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~ 396 (460)
...++.+.+|++ +. .++..+++ +|.- |...++.||+++|+|+|+.... .....+ ...+.|..+ .
T Consensus 242 ~~~~v~~~g~~~~~~~~~~~~~~ad~--~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~----~~~e~~-~~~~~g~~~-~ 313 (365)
T cd03825 242 LPFPVHYLGSLNDDESLALIYSAADV--FVVPSLQENFPNTAIEALACGTPVVAFDVG----GIPDIV-DHGVTGYLA-K 313 (365)
T ss_pred CCCceEecCCcCCHHHHHHHHHhCCE--EEeccccccccHHHHHHHhcCCCEEEecCC----CChhhe-eCCCceEEe-C
Confidence 345777889998 43 56888887 6663 3357999999999999876532 233344 233466666 4
Q ss_pred CcchHHHHHHHHHHHhHhHHH
Q 012587 397 LCDRNIVEKAVNDLMVERKEE 417 (460)
Q Consensus 397 ~~~~~~l~~~i~~~l~~~~~~ 417 (460)
..+.+++.+++.+++++ ++
T Consensus 314 ~~~~~~~~~~l~~l~~~--~~ 332 (365)
T cd03825 314 PGDPEDLAEGIEWLLAD--PD 332 (365)
T ss_pred CCCHHHHHHHHHHHHhC--HH
Confidence 45789999999999987 55
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=99.03 E-value=8.8e-07 Score=85.46 Aligned_cols=320 Identities=17% Similarity=0.146 Sum_probs=164.5
Q ss_pred EEEEEcCC---C-CCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCCC
Q 012587 8 HVAILPLP---A-VGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTP 83 (460)
Q Consensus 8 ~il~~~~~---~-~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (460)
||++++.. . .|+...+..+++.|.+.||+|++++............. ....... . ..
T Consensus 1 kI~ii~~~~~~~~~G~~~~~~~l~~~L~~~g~~v~i~~~~~~~~~~~~~~~----------~~~~~~~-------~--~~ 61 (374)
T cd03801 1 KILLVTPEYPPSVGGAERHVLELARALAARGHEVTVLTPGDGGLPDEEEVG----------GIVVVRP-------P--PL 61 (374)
T ss_pred CeeEEecccCCccCcHhHHHHHHHHHHHhcCceEEEEecCCCCCCceeeec----------CcceecC-------C--cc
Confidence 45555553 2 68899999999999999999999997443221111000 0000000 0 00
Q ss_pred CChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcchHH--HHHHHhCCceEEEecchhHHHHHHhhccccccCCCC
Q 012587 84 DKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSRAI--DAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGEL 161 (460)
Q Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~~~~--~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (460)
.......... .....+...++.. +||+|+......... ..+...++|++............ .
T Consensus 62 ~~~~~~~~~~--~~~~~~~~~~~~~--~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~-~----------- 125 (374)
T cd03801 62 LRVRRLLLLL--LLALRLRRLLRRE--RFDVVHAHDWLALLAAALAARLLGIPLVLTVHGLEFGRPG-N----------- 125 (374)
T ss_pred cccchhHHHH--HHHHHHHHHhhhc--CCcEEEEechhHHHHHHHHHHhcCCcEEEEeccchhhccc-c-----------
Confidence 0001011111 1223445556665 999999887665333 47888899998765542211000 0
Q ss_pred CCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCC----CceeEeCccccccc
Q 012587 162 PIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSC----PNIYSIGPLNAHLK 237 (460)
Q Consensus 162 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~----~~~~~vG~~~~~~~ 237 (460)
. ............ .......+.+++.+....+. ... .. .++..+........
T Consensus 126 ------------~----~~~~~~~~~~~~--~~~~~~~d~~i~~s~~~~~~-----~~~-~~~~~~~~~~~i~~~~~~~~ 181 (374)
T cd03801 126 ------------E----LGLLLKLARALE--RRALRRADRIIAVSEATREE-----LRE-LGGVPPEKITVIPNGVDTER 181 (374)
T ss_pred ------------c----hhHHHHHHHHHH--HHHHHhCCEEEEecHHHHHH-----HHh-cCCCCCCcEEEecCcccccc
Confidence 0 000000111111 12235667777777543221 122 21 14454443332111
Q ss_pred cCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhh---C--CCcEEEEEccCCCCCCC
Q 012587 238 VRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVH---S--KKSFLWVIRPDLISGKD 312 (460)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~---~--~~~~i~~~~~~~~~~~~ 312 (460)
.. ........-.. ...+..+++.+|+... ...+..+++++.. . +.++++.. ..
T Consensus 182 ~~------------~~~~~~~~~~~-~~~~~~~i~~~g~~~~--~k~~~~~i~~~~~~~~~~~~~~l~i~G-~~------ 239 (374)
T cd03801 182 FR------------PAPRAARRRLG-IPEDEPVILFVGRLVP--RKGVDLLLEALAKLRKEYPDVRLVIVG-DG------ 239 (374)
T ss_pred cC------------ccchHHHhhcC-CcCCCeEEEEecchhh--hcCHHHHHHHHHHHhhhcCCeEEEEEe-Cc------
Confidence 00 00000011111 2234556677887652 2223334444433 2 23443332 11
Q ss_pred CCCCCchHHHH-----HhcCCceeeeecCh---Hhhhcccccccccc----cCChhHHHHHHHhCCceecccccccchhh
Q 012587 313 GENQIPEELLE-----ATKERGCIAGWVPQ---EEVLAHSAVGGFLT----HCGWNSTLESIVAGMPMICWPSFADQQIN 380 (460)
Q Consensus 313 ~~~~~~~~~~~-----~~~~n~~~~~~vp~---~~il~~~~~~~~I~----HGG~gs~~eal~~GvP~l~~P~~~DQ~~n 380 (460)
.....+.+ ...+++.+.+++++ ..++..+++ +|. -|..+++.||+++|+|+|+.+. ...
T Consensus 240 ---~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di--~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~----~~~ 310 (374)
T cd03801 240 ---PLREELEALAAELGLGDRVTFLGFVPDEDLPALYAAADV--FVLPSLYEGFGLVLLEAMAAGLPVVASDV----GGI 310 (374)
T ss_pred ---HHHHHHHHHHHHhCCCcceEEEeccChhhHHHHHHhcCE--EEecchhccccchHHHHHHcCCcEEEeCC----CCh
Confidence 11111111 14568888999974 456788887 553 3556799999999999998765 345
Q ss_pred HHHHHhhhceeeeecCCcchHHHHHHHHHHHhHhHHHHHHH
Q 012587 381 SRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVERKEEFMES 421 (460)
Q Consensus 381 a~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~ 421 (460)
...+ +..+.|... ...+.+++.+++.+++++ +..++.
T Consensus 311 ~~~~-~~~~~g~~~-~~~~~~~l~~~i~~~~~~--~~~~~~ 347 (374)
T cd03801 311 PEVV-EDGETGLLV-PPGDPEALAEAILRLLDD--PELRRR 347 (374)
T ss_pred hHHh-cCCcceEEe-CCCCHHHHHHHHHHHHcC--hHHHHH
Confidence 5566 345677777 445689999999999987 554443
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.01 E-value=3e-07 Score=89.14 Aligned_cols=135 Identities=19% Similarity=0.167 Sum_probs=83.5
Q ss_pred CcEEEEEecCcccCCHHHHHHHHHHHhhCC-CcEEEEEccCCCCCCCCCCCCchHHHH-----HhcCCceeeeecChH--
Q 012587 267 QSVIYVSFGSIAVMSRDQLIEFYYGLVHSK-KSFLWVIRPDLISGKDGENQIPEELLE-----ATKERGCIAGWVPQE-- 338 (460)
Q Consensus 267 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~-----~~~~n~~~~~~vp~~-- 338 (460)
+..+++..|+... ......++++++++. .++++... |. ....+.+ ...+|+.+.+|+|+.
T Consensus 190 ~~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~l~i~G~-------g~---~~~~~~~~~~~~~~~~~V~~~g~v~~~~~ 257 (357)
T cd03795 190 GRPFFLFVGRLVY--YKGLDVLLEAAAALPDAPLVIVGE-------GP---LEAELEALAAALGLLDRVRFLGRLDDEEK 257 (357)
T ss_pred CCcEEEEeccccc--ccCHHHHHHHHHhccCcEEEEEeC-------Ch---hHHHHHHHHHhcCCcceEEEcCCCCHHHH
Confidence 3456677887652 223455667776665 55554432 11 1122221 134689999999974
Q ss_pred -hhhcccccccccc---cCCh-hHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecCCcchHHHHHHHHHHHhH
Q 012587 339 -EVLAHSAVGGFLT---HCGW-NSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVE 413 (460)
Q Consensus 339 -~il~~~~~~~~I~---HGG~-gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~~ 413 (460)
.++..+++-++.+ +.|. .++.||+++|+|+|+....+.. ..+.+..+.|... ..-+.+++.++|.++++|
T Consensus 258 ~~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~----~~i~~~~~~g~~~-~~~d~~~~~~~i~~l~~~ 332 (357)
T cd03795 258 AALLAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGG----SYVNLHGVTGLVV-PPGDPAALAEAIRRLLED 332 (357)
T ss_pred HHHHHhCCEEEeCCcccccccchHHHHHHHcCCCEEecCCCCch----hHHhhCCCceEEe-CCCCHHHHHHHHHHHHHC
Confidence 5777888733333 2343 4799999999999987644433 2331113567666 445899999999999997
Q ss_pred hHHHHHH
Q 012587 414 RKEEFME 420 (460)
Q Consensus 414 ~~~~~~~ 420 (460)
++.++
T Consensus 333 --~~~~~ 337 (357)
T cd03795 333 --PELRE 337 (357)
T ss_pred --HHHHH
Confidence 54443
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.99 E-value=1e-06 Score=84.47 Aligned_cols=96 Identities=22% Similarity=0.224 Sum_probs=64.2
Q ss_pred cCCceeeeecC-hHhhhcccccccccccC----ChhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecCCcch
Q 012587 326 KERGCIAGWVP-QEEVLAHSAVGGFLTHC----GWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDR 400 (460)
Q Consensus 326 ~~n~~~~~~vp-~~~il~~~~~~~~I~HG----G~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~~ 400 (460)
..++.+.++.. -..++..+++ +|.-. ...++.||+++|+|+|+.+..+.+ ..+.+....|... +..+.
T Consensus 234 ~~~v~~~g~~~~~~~~~~~ad~--~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~----~~~~~~~~~g~~~-~~~~~ 306 (348)
T cd03820 234 EDRVILLGFTKNIEEYYAKASI--FVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGP----SEIIEDGVNGLLV-PNGDV 306 (348)
T ss_pred CCeEEEcCCcchHHHHHHhCCE--EEeCccccccCHHHHHHHHcCCCEEEecCCCch----HhhhccCcceEEe-CCCCH
Confidence 34666666633 4778888887 55443 257899999999999987544333 2232332277777 45678
Q ss_pred HHHHHHHHHHHhHhHHHHHHHHHHHHHHHH
Q 012587 401 NIVEKAVNDLMVERKEEFMESADRMANLAK 430 (460)
Q Consensus 401 ~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~ 430 (460)
+++.+++.++++| ++.+++..+-+..+.
T Consensus 307 ~~~~~~i~~ll~~--~~~~~~~~~~~~~~~ 334 (348)
T cd03820 307 EALAEALLRLMED--EELRKRMGANARESA 334 (348)
T ss_pred HHHHHHHHHHHcC--HHHHHHHHHHHHHHH
Confidence 9999999999998 776655554443333
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=98.99 E-value=3.9e-06 Score=83.15 Aligned_cols=88 Identities=17% Similarity=0.035 Sum_probs=62.3
Q ss_pred cCCceeeeecChH---hhhcccccccccc---cCC-hhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecCCc
Q 012587 326 KERGCIAGWVPQE---EVLAHSAVGGFLT---HCG-WNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLC 398 (460)
Q Consensus 326 ~~n~~~~~~vp~~---~il~~~~~~~~I~---HGG-~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~ 398 (460)
.+|+.+.+++++. .+++.+++ +|. +.| ..++.||+++|+|+|+.... .....+ +..+.|..+ ..-
T Consensus 282 ~~~v~~~g~~~~~~~~~~l~~ad~--~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~----~~~e~i-~~~~~g~~~-~~~ 353 (405)
T TIGR03449 282 ADRVRFLPPRPPEELVHVYRAADV--VAVPSYNESFGLVAMEAQACGTPVVAARVG----GLPVAV-ADGETGLLV-DGH 353 (405)
T ss_pred CceEEECCCCCHHHHHHHHHhCCE--EEECCCCCCcChHHHHHHHcCCCEEEecCC----CcHhhh-ccCCceEEC-CCC
Confidence 3578888999864 56888987 552 233 35899999999999986543 333445 344567766 445
Q ss_pred chHHHHHHHHHHHhHhHHHHHHHHH
Q 012587 399 DRNIVEKAVNDLMVERKEEFMESAD 423 (460)
Q Consensus 399 ~~~~l~~~i~~~l~~~~~~~~~~a~ 423 (460)
+.+++.+++.+++++ +..+++..
T Consensus 354 d~~~la~~i~~~l~~--~~~~~~~~ 376 (405)
T TIGR03449 354 DPADWADALARLLDD--PRTRIRMG 376 (405)
T ss_pred CHHHHHHHHHHHHhC--HHHHHHHH
Confidence 889999999999987 55444433
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.2e-06 Score=82.94 Aligned_cols=313 Identities=18% Similarity=0.115 Sum_probs=158.8
Q ss_pred CCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCCCCChHHHHHHHHh
Q 012587 16 AVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPDKFPELVDSLNC 95 (460)
Q Consensus 16 ~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (460)
..|+..-...+++.|.+.||+|++++............. ................ ..........
T Consensus 13 ~~g~~~~~~~~~~~l~~~g~~v~v~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~-~~~~~~~~~~---- 77 (377)
T cd03798 13 NGGGGIFVKELARALAKRGVEVTVLAPGPWGPKLLDLLK----------GRLVGVERLPVLLPVV-PLLKGPLLYL---- 77 (377)
T ss_pred CchHHHHHHHHHHHHHHCCCceEEEecCCCCCCchhhcc----------cccccccccccCcchh-hccccchhHH----
Confidence 478888899999999999999999997543222211100 0000000000000000 0000111111
Q ss_pred hCcHHHHHHHH--cCCCCccEEEEcCCcc---hHHHHHHHhCCceEEEecchhHHHHHHhhccccccCCCCCCCCCccCC
Q 012587 96 ATPPLLKEMVS--DSKSPVNCIITDGYMS---RAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELPIKGFLRCR 170 (460)
Q Consensus 96 ~~~~~l~~~~~--~~~~~pD~vv~D~~~~---~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 170 (460)
.....+..+++ .. +||+|++..... ....++...|+|++........... .
T Consensus 78 ~~~~~~~~~l~~~~~--~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~-----~----------------- 133 (377)
T cd03798 78 LAARALLKLLKLKRF--RPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLL-----P----------------- 133 (377)
T ss_pred HHHHHHHHHHhcccC--CCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhccc-----C-----------------
Confidence 12234556665 54 999999885443 3556667788898875543211100 0
Q ss_pred CCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcC--C-CceeEeCccccccccCCCccccCC
Q 012587 171 DLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHS--C-PNIYSIGPLNAHLKVRIPEKTYSS 247 (460)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~--~-~~~~~vG~~~~~~~~~~~~~~~~~ 247 (460)
.........+ ......+.+++.+....+. ... . . .++..++..........
T Consensus 134 -----------~~~~~~~~~~--~~~~~~d~ii~~s~~~~~~-----~~~-~~~~~~~~~~i~~~~~~~~~~~------- 187 (377)
T cd03798 134 -----------RKRLLRALLR--RALRRADAVIAVSEALADE-----LKA-LGIDPEKVTVIPNGVDTERFSP------- 187 (377)
T ss_pred -----------chhhHHHHHH--HHHhcCCeEEeCCHHHHHH-----HHH-hcCCCCceEEcCCCcCcccCCC-------
Confidence 0001111111 2235667777777433221 122 2 1 34555554332211100
Q ss_pred CCccccchhhhhhhhcCCCCcEEEEEecCcccC-CHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHHHH--
Q 012587 248 SSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVM-SRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEA-- 324 (460)
Q Consensus 248 ~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~-~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-- 324 (460)
...... .-+. ...++.+++..|+.... ..+.+-..+..+...+.++.+.+.+. +. ....+.+.
T Consensus 188 ----~~~~~~-~~~~-~~~~~~~i~~~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~-----~~---~~~~~~~~~~ 253 (377)
T cd03798 188 ----ADRAEA-RKLG-LPEDKKVILFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGD-----GP---LREALEALAA 253 (377)
T ss_pred ----cchHHH-Hhcc-CCCCceEEEEeccCccccCHHHHHHHHHHHHhcCCCeEEEEEcC-----Cc---chHHHHHHHH
Confidence 000000 0111 22345677788876532 23333333344433322333333211 11 11112111
Q ss_pred ---hcCCceeeeecChH---hhhccccccccc----ccCChhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeee
Q 012587 325 ---TKERGCIAGWVPQE---EVLAHSAVGGFL----THCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDI 394 (460)
Q Consensus 325 ---~~~n~~~~~~vp~~---~il~~~~~~~~I----~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~ 394 (460)
..+|+.+.+++++. .++..+++ +| +-|..+++.||+++|+|+|+.+.. .....+ +..+.|...
T Consensus 254 ~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~----~~~~~~-~~~~~g~~~ 326 (377)
T cd03798 254 ELGLEDRVTFLGAVPHEEVPAYYAAADV--FVLPSLREGFGLVLLEAMACGLPVVATDVG----GIPEII-TDGENGLLV 326 (377)
T ss_pred hcCCcceEEEeCCCCHHHHHHHHHhcCe--eecchhhccCChHHHHHHhcCCCEEEecCC----ChHHHh-cCCcceeEE
Confidence 24688888999864 56778887 54 224567899999999999986543 344556 455666666
Q ss_pred cCCcchHHHHHHHHHHHhHhHHH
Q 012587 395 KDLCDRNIVEKAVNDLMVERKEE 417 (460)
Q Consensus 395 ~~~~~~~~l~~~i~~~l~~~~~~ 417 (460)
...+.+++.+++.+++++ +.
T Consensus 327 -~~~~~~~l~~~i~~~~~~--~~ 346 (377)
T cd03798 327 -PPGDPEALAEAILRLLAD--PW 346 (377)
T ss_pred -CCCCHHHHHHHHHHHhcC--cH
Confidence 556899999999999997 55
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.8e-06 Score=85.14 Aligned_cols=83 Identities=16% Similarity=0.078 Sum_probs=58.5
Q ss_pred cCCceeeeecChH---hhhccccccccccc---CC-hhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecCCc
Q 012587 326 KERGCIAGWVPQE---EVLAHSAVGGFLTH---CG-WNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLC 398 (460)
Q Consensus 326 ~~n~~~~~~vp~~---~il~~~~~~~~I~H---GG-~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~ 398 (460)
.+|+.+.+++|.. .++..+++ ++.. -| ..++.||+++|+|+|+.-.. .....+ ...+.|... . .
T Consensus 279 ~~~V~f~g~~~~~~~~~~l~~ad~--~l~~s~~E~~g~~~lEAma~G~PvI~s~~~----~~~e~i-~~~~~g~~~-~-~ 349 (392)
T cd03805 279 EDQVIFLPSISDSQKELLLSSARA--LLYTPSNEHFGIVPLEAMYAGKPVIACNSG----GPLETV-VDGETGFLC-E-P 349 (392)
T ss_pred CceEEEeCCCChHHHHHHHhhCeE--EEECCCcCCCCchHHHHHHcCCCEEEECCC----CcHHHh-ccCCceEEe-C-C
Confidence 4688899999975 56788887 5532 22 35789999999999987443 233445 343567666 3 3
Q ss_pred chHHHHHHHHHHHhHhHHHHH
Q 012587 399 DRNIVEKAVNDLMVERKEEFM 419 (460)
Q Consensus 399 ~~~~l~~~i~~~l~~~~~~~~ 419 (460)
+.+++.+++.+++++ ++.+
T Consensus 350 ~~~~~a~~i~~l~~~--~~~~ 368 (392)
T cd03805 350 TPEEFAEAMLKLAND--PDLA 368 (392)
T ss_pred CHHHHHHHHHHHHhC--hHHH
Confidence 789999999999987 5433
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.91 E-value=2.8e-06 Score=83.98 Aligned_cols=78 Identities=15% Similarity=0.234 Sum_probs=53.9
Q ss_pred cCCceeeeecCh---Hhhhcccccccccc---cCCh-hHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecCCc
Q 012587 326 KERGCIAGWVPQ---EEVLAHSAVGGFLT---HCGW-NSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLC 398 (460)
Q Consensus 326 ~~n~~~~~~vp~---~~il~~~~~~~~I~---HGG~-gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~ 398 (460)
.+++.+.+|+|+ ..+++.+++ +|. +-|. .++.||+++|+|+|+.+..+ ....+ +. |-+... . .
T Consensus 249 ~~~v~~~G~~~~~~~~~~l~~ad~--~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg----~~e~i-~~-~~~~~~-~-~ 318 (398)
T cd03796 249 QDRVELLGAVPHERVRDVLVQGHI--FLNTSLTEAFCIAIVEAASCGLLVVSTRVGG----IPEVL-PP-DMILLA-E-P 318 (398)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCCE--EEeCChhhccCHHHHHHHHcCCCEEECCCCC----chhhe-eC-Cceeec-C-C
Confidence 456888899986 457778887 543 3344 49999999999999877542 22344 33 433222 2 3
Q ss_pred chHHHHHHHHHHHhH
Q 012587 399 DRNIVEKAVNDLMVE 413 (460)
Q Consensus 399 ~~~~l~~~i~~~l~~ 413 (460)
+.+++.+++.+++++
T Consensus 319 ~~~~l~~~l~~~l~~ 333 (398)
T cd03796 319 DVESIVRKLEEAISI 333 (398)
T ss_pred CHHHHHHHHHHHHhC
Confidence 789999999999884
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >PRK14089 ipid-A-disaccharide synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=7.1e-07 Score=85.06 Aligned_cols=145 Identities=14% Similarity=0.068 Sum_probs=88.6
Q ss_pred CcEEEEEecCcccCCHHHHHHHHHHHhhCCCc-EEEEEccCCCCCCCCCCCCchHHHHHhcC--CceeeeecChHhhhcc
Q 012587 267 QSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKS-FLWVIRPDLISGKDGENQIPEELLEATKE--RGCIAGWVPQEEVLAH 343 (460)
Q Consensus 267 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--n~~~~~~vp~~~il~~ 343 (460)
+++|.+-.||....-...+..+.++.+.+..+ .++.+.. .. .. +.+.+...+ .+.+.+ .-.+++..
T Consensus 167 ~~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~~~~~i~~-------a~-~~-~~i~~~~~~~~~~~~~~--~~~~~m~~ 235 (347)
T PRK14089 167 EGTIAFMPGSRKSEIKRLMPIFKELAKKLEGKEKILVVPS-------FF-KG-KDLKEIYGDISEFEISY--DTHKALLE 235 (347)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCcEEEEeC-------CC-cH-HHHHHHHhcCCCcEEec--cHHHHHHh
Confidence 47899999998754445555455555543221 2222221 10 11 222222211 222232 34678888
Q ss_pred cccccccccCChhHHHHHHHhCCceeccccc--ccchhhHHHHH--hhhceeeee-------------c-CCcchHHHHH
Q 012587 344 SAVGGFLTHCGWNSTLESIVAGMPMICWPSF--ADQQINSRFVG--EVWKLGLDI-------------K-DLCDRNIVEK 405 (460)
Q Consensus 344 ~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~--~DQ~~na~~~~--e~~G~g~~~-------------~-~~~~~~~l~~ 405 (460)
+++ +|+-.|..|+ |+..+|+|||+ +.- .=|..||+++. ...|+.-.+ . +++|++.|.+
T Consensus 236 aDl--al~~SGT~TL-E~al~g~P~Vv-~Yk~~~lty~iak~lv~~~~igL~Nii~~~~~~~~vvPEllQ~~~t~~~la~ 311 (347)
T PRK14089 236 AEF--AFICSGTATL-EAALIGTPFVL-AYKAKAIDYFIAKMFVKLKHIGLANIFFDFLGKEPLHPELLQEFVTVENLLK 311 (347)
T ss_pred hhH--HHhcCcHHHH-HHHHhCCCEEE-EEeCCHHHHHHHHHHHcCCeeehHHHhcCCCcccccCchhhcccCCHHHHHH
Confidence 997 9999999999 99999999999 543 46788998884 033443222 2 5799999999
Q ss_pred HHHHHHhHhHHHHHHHHHHHHHHH
Q 012587 406 AVNDLMVERKEEFMESADRMANLA 429 (460)
Q Consensus 406 ~i~~~l~~~~~~~~~~a~~l~~~~ 429 (460)
.+.+ +.. ..+++..+++.+.+
T Consensus 312 ~i~~-~~~--~~~~~~~~~l~~~l 332 (347)
T PRK14089 312 AYKE-MDR--EKFFKKSKELREYL 332 (347)
T ss_pred HHHH-HHH--HHHHHHHHHHHHHh
Confidence 9888 333 55666666666655
|
|
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.90 E-value=7.2e-06 Score=79.47 Aligned_cols=91 Identities=14% Similarity=0.152 Sum_probs=61.1
Q ss_pred cCCceeeeecChH---hhhccccccccccc-CC-hhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecCCcch
Q 012587 326 KERGCIAGWVPQE---EVLAHSAVGGFLTH-CG-WNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDR 400 (460)
Q Consensus 326 ~~n~~~~~~vp~~---~il~~~~~~~~I~H-GG-~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~~ 400 (460)
.+++.+.+|+++. .++..+++-++-++ .| ..++.||+++|+|+|+.+. ......+ .. +.|.... .+.
T Consensus 261 ~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~~~~-~~-~~~~~~~--~~~ 332 (375)
T cd03821 261 EDRVTFTGMLYGEDKAAALADADLFVLPSHSENFGIVVAEALACGTPVVTTDK----VPWQELI-EY-GCGWVVD--DDV 332 (375)
T ss_pred cceEEEcCCCChHHHHHHHhhCCEEEeccccCCCCcHHHHHHhcCCCEEEcCC----CCHHHHh-hc-CceEEeC--CCh
Confidence 4688888999954 45788887222222 22 4689999999999998753 3344555 34 7777664 244
Q ss_pred HHHHHHHHHHHhHhHHHHHHHHHHHH
Q 012587 401 NIVEKAVNDLMVERKEEFMESADRMA 426 (460)
Q Consensus 401 ~~l~~~i~~~l~~~~~~~~~~a~~l~ 426 (460)
+++.+++.+++++ ++.+++..+-+
T Consensus 333 ~~~~~~i~~l~~~--~~~~~~~~~~~ 356 (375)
T cd03821 333 DALAAALRRALEL--PQRLKAMGENG 356 (375)
T ss_pred HHHHHHHHHHHhC--HHHHHHHHHHH
Confidence 9999999999997 54444443333
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=98.89 E-value=2e-07 Score=90.94 Aligned_cols=130 Identities=14% Similarity=0.124 Sum_probs=83.2
Q ss_pred CCcEEEEEecCcccC-CHHHHHHHHHHHhhCCC-cEEEEEccCCCCCCCCCCCCchHHHH---Hh---cCCceeeeecCh
Q 012587 266 KQSVIYVSFGSIAVM-SRDQLIEFYYGLVHSKK-SFLWVIRPDLISGKDGENQIPEELLE---AT---KERGCIAGWVPQ 337 (460)
Q Consensus 266 ~~~~V~vs~GS~~~~-~~~~~~~~~~al~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~---~~---~~n~~~~~~vp~ 337 (460)
+++.|++++|..... ....+..++++++.+.. ++++....+ . .....+.+ +. .+|+.+.++.++
T Consensus 197 ~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~------~--~~~~~l~~~~~~~~~~~~~v~~~~~~~~ 268 (363)
T cd03786 197 PKKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNH------P--RTRPRIREAGLEFLGHHPNVLLISPLGY 268 (363)
T ss_pred CCCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECC------C--ChHHHHHHHHHhhccCCCCEEEECCcCH
Confidence 467788888876543 24456777777776533 244443321 1 11122221 11 357777766654
Q ss_pred ---HhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecCCcchHHHHHHHHHHHhH
Q 012587 338 ---EEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVE 413 (460)
Q Consensus 338 ---~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~~ 413 (460)
..++..+++ +|+-.| |.+.||+++|+|+|+++.. |. +..+. +.|++..+. .+.++|.+++.+++++
T Consensus 269 ~~~~~l~~~ad~--~v~~Sg-gi~~Ea~~~g~PvI~~~~~--~~--~~~~~-~~g~~~~~~--~~~~~i~~~i~~ll~~ 337 (363)
T cd03786 269 LYFLLLLKNADL--VLTDSG-GIQEEASFLGVPVLNLRDR--TE--RPETV-ESGTNVLVG--TDPEAILAAIEKLLSD 337 (363)
T ss_pred HHHHHHHHcCcE--EEEcCc-cHHhhhhhcCCCEEeeCCC--Cc--cchhh-heeeEEecC--CCHHHHHHHHHHHhcC
Confidence 356777887 999998 7888999999999998743 21 33343 457776663 2589999999999986
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=98.85 E-value=2.6e-05 Score=78.09 Aligned_cols=84 Identities=14% Similarity=0.203 Sum_probs=58.4
Q ss_pred cCCceeeeecChHhh---hccc----ccccccccC---C-hhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeee
Q 012587 326 KERGCIAGWVPQEEV---LAHS----AVGGFLTHC---G-WNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDI 394 (460)
Q Consensus 326 ~~n~~~~~~vp~~~i---l~~~----~~~~~I~HG---G-~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~ 394 (460)
.+++.+.+++++.++ ++.+ ++ ||.-. | ..++.||+++|+|+|+.... .....+ +....|..+
T Consensus 316 ~~~V~f~g~~~~~~~~~~~~~a~~~~Dv--~v~pS~~E~fg~~~lEAma~G~PvV~s~~g----g~~eiv-~~~~~G~lv 388 (439)
T TIGR02472 316 YGKVAYPKHHRPDDVPELYRLAARSRGI--FVNPALTEPFGLTLLEAAACGLPIVATDDG----GPRDII-ANCRNGLLV 388 (439)
T ss_pred CceEEecCCCCHHHHHHHHHHHhhcCCE--EecccccCCcccHHHHHHHhCCCEEEeCCC----CcHHHh-cCCCcEEEe
Confidence 467777788886554 5544 55 66543 3 35999999999999988643 244445 343467766
Q ss_pred cCCcchHHHHHHHHHHHhHhHHHHH
Q 012587 395 KDLCDRNIVEKAVNDLMVERKEEFM 419 (460)
Q Consensus 395 ~~~~~~~~l~~~i~~~l~~~~~~~~ 419 (460)
..-+.++|.++|.++++| +..+
T Consensus 389 -~~~d~~~la~~i~~ll~~--~~~~ 410 (439)
T TIGR02472 389 -DVLDLEAIASALEDALSD--SSQW 410 (439)
T ss_pred -CCCCHHHHHHHHHHHHhC--HHHH
Confidence 446889999999999997 5543
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=98.84 E-value=2.7e-06 Score=82.93 Aligned_cols=85 Identities=20% Similarity=0.194 Sum_probs=62.4
Q ss_pred cCCceeeeecChH---hhhccccccccccc----------CChhHHHHHHHhCCceecccccccchhhHHHHHhhhceee
Q 012587 326 KERGCIAGWVPQE---EVLAHSAVGGFLTH----------CGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGL 392 (460)
Q Consensus 326 ~~n~~~~~~vp~~---~il~~~~~~~~I~H----------GG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~ 392 (460)
.+++.+.+++|+. .++..+++ +|.- |-.+++.||+++|+|+|+.+.. .++..+ +..+.|.
T Consensus 244 ~~~v~~~g~~~~~~l~~~~~~ad~--~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~----~~~e~i-~~~~~g~ 316 (367)
T cd05844 244 GGRVTFLGAQPHAEVRELMRRARI--FLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHG----GIPEAV-EDGETGL 316 (367)
T ss_pred CCeEEECCCCCHHHHHHHHHhCCE--EEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCC----Cchhhe-ecCCeeE
Confidence 5678888999864 44788887 5431 2357999999999999987653 355566 3557787
Q ss_pred eecCCcchHHHHHHHHHHHhHhHHHHHH
Q 012587 393 DIKDLCDRNIVEKAVNDLMVERKEEFME 420 (460)
Q Consensus 393 ~~~~~~~~~~l~~~i~~~l~~~~~~~~~ 420 (460)
.+ ...+.+++.+++.++++| +..++
T Consensus 317 ~~-~~~d~~~l~~~i~~l~~~--~~~~~ 341 (367)
T cd05844 317 LV-PEGDVAALAAALGRLLAD--PDLRA 341 (367)
T ss_pred EE-CCCCHHHHHHHHHHHHcC--HHHHH
Confidence 77 456789999999999997 55443
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.7e-06 Score=83.19 Aligned_cols=128 Identities=13% Similarity=0.024 Sum_probs=77.0
Q ss_pred EEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHHHH--hcCCceeeeecChH---hhhccc
Q 012587 270 IYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEA--TKERGCIAGWVPQE---EVLAHS 344 (460)
Q Consensus 270 V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~n~~~~~~vp~~---~il~~~ 344 (460)
+++..|.... ......+++++++.+.++++.-.+. ....+.....+. ..+++.+.+++++. .+++.+
T Consensus 173 ~i~~~Gr~~~--~Kg~~~li~~~~~~~~~l~i~G~~~------~~~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~ 244 (335)
T cd03802 173 YLLFLGRISP--EKGPHLAIRAARRAGIPLKLAGPVS------DPDYFYREIAPELLDGPDIEYLGEVGGAEKAELLGNA 244 (335)
T ss_pred EEEEEEeecc--ccCHHHHHHHHHhcCCeEEEEeCCC------CHHHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhC
Confidence 4455676642 2233456677777787776654211 000111111111 25788899999975 467888
Q ss_pred ccccccc--cCCh-hHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecCCcchHHHHHHHHHHHhH
Q 012587 345 AVGGFLT--HCGW-NSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVE 413 (460)
Q Consensus 345 ~~~~~I~--HGG~-gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~~ 413 (460)
++-++-+ +-|. .++.||+++|+|+|+.... .....+ +....|...+. .+++.+++.++++.
T Consensus 245 d~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~----~~~e~i-~~~~~g~l~~~---~~~l~~~l~~l~~~ 308 (335)
T cd03802 245 RALLFPILWEEPFGLVMIEAMACGTPVIAFRRG----AVPEVV-EDGVTGFLVDS---VEELAAAVARADRL 308 (335)
T ss_pred cEEEeCCcccCCcchHHHHHHhcCCCEEEeCCC----Cchhhe-eCCCcEEEeCC---HHHHHHHHHHHhcc
Confidence 8723323 2343 5899999999999987643 333445 34236776632 89999999998763
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.79 E-value=2.7e-05 Score=75.37 Aligned_cols=135 Identities=17% Similarity=0.152 Sum_probs=77.8
Q ss_pred CCcEEEEEecCccc-CCHHHHHHHHHHHhhC--CCcEEEEEccCCCCCCCCCCCCchHHH---H--HhcCCceeeeecC-
Q 012587 266 KQSVIYVSFGSIAV-MSRDQLIEFYYGLVHS--KKSFLWVIRPDLISGKDGENQIPEELL---E--ATKERGCIAGWVP- 336 (460)
Q Consensus 266 ~~~~V~vs~GS~~~-~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~---~--~~~~n~~~~~~vp- 336 (460)
+...+++..|++.. ...+.+...+..+... +.+++++-.+. ........+. . ...+++.+.+|.+
T Consensus 183 ~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~ivG~~~------~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~ 256 (355)
T cd03819 183 KGKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLIVGDAQ------GRRFYYAELLELIKRLGLQDRVTFVGHCSD 256 (355)
T ss_pred CCceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEEEECCc------ccchHHHHHHHHHHHcCCcceEEEcCCccc
Confidence 34556677787653 2345455555555543 34444433211 0001111111 1 1245788888854
Q ss_pred hHhhhcccccccccc--cCC-hhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecCCcchHHHHHHHHHHHh
Q 012587 337 QEEVLAHSAVGGFLT--HCG-WNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMV 412 (460)
Q Consensus 337 ~~~il~~~~~~~~I~--HGG-~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~ 412 (460)
...++..+++-++-+ +-| ..++.||+++|+|+|+.... .....+ ...+.|..+ ..-+.+.+.++|..++.
T Consensus 257 ~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~----~~~e~i-~~~~~g~~~-~~~~~~~l~~~i~~~~~ 329 (355)
T cd03819 257 MPAAYALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHG----GARETV-RPGETGLLV-PPGDAEALAQALDQILS 329 (355)
T ss_pred HHHHHHhCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCC----CcHHHH-hCCCceEEe-CCCCHHHHHHHHHHHHh
Confidence 367888888833323 223 35999999999999986532 234455 344477777 45688999999976664
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.78 E-value=9.5e-06 Score=78.67 Aligned_cols=79 Identities=19% Similarity=0.203 Sum_probs=56.6
Q ss_pred cCCceee-eecCh---Hhhhcccccccccc--c----CChhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeec
Q 012587 326 KERGCIA-GWVPQ---EEVLAHSAVGGFLT--H----CGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIK 395 (460)
Q Consensus 326 ~~n~~~~-~~vp~---~~il~~~~~~~~I~--H----GG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~ 395 (460)
.+|+.+. .|+|+ ..++..+++ +|. + |..+++.||+++|+|+|+.+..+ ...+ ...+.|...
T Consensus 246 ~~~v~~~~~~~~~~~~~~~~~~ad~--~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-----~~~i-~~~~~g~~~- 316 (366)
T cd03822 246 ADRVIFINRYLPDEELPELFSAADV--VVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-----AEEV-LDGGTGLLV- 316 (366)
T ss_pred CCcEEEecCcCCHHHHHHHHhhcCE--EEecccccccccchHHHHHHHcCCCEEecCCCC-----hhee-eeCCCcEEE-
Confidence 4677777 45885 567788887 552 2 33568999999999999887544 2334 234667766
Q ss_pred CCcchHHHHHHHHHHHhH
Q 012587 396 DLCDRNIVEKAVNDLMVE 413 (460)
Q Consensus 396 ~~~~~~~l~~~i~~~l~~ 413 (460)
..-+.+++.+++.+++++
T Consensus 317 ~~~d~~~~~~~l~~l~~~ 334 (366)
T cd03822 317 PPGDPAALAEAIRRLLAD 334 (366)
T ss_pred cCCCHHHHHHHHHHHHcC
Confidence 445689999999999986
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.7e-05 Score=76.53 Aligned_cols=77 Identities=19% Similarity=0.266 Sum_probs=54.6
Q ss_pred CCceeeeecC-hHhhhcccccccccccCC----hhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecCCcchH
Q 012587 327 ERGCIAGWVP-QEEVLAHSAVGGFLTHCG----WNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRN 401 (460)
Q Consensus 327 ~n~~~~~~vp-~~~il~~~~~~~~I~HGG----~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~~~ 401 (460)
+++.+.+... ...++..+++ +|..+. .+++.||+++|+|+|+.. ...+...+ +. .|..+ ..-+.+
T Consensus 251 ~~v~~~g~~~~~~~~~~~adi--~v~ps~~e~~~~~~~Ea~a~g~PvI~~~----~~~~~e~~-~~--~g~~~-~~~~~~ 320 (365)
T cd03807 251 DKVILLGERSDVPALLNALDV--FVLSSLSEGFPNVLLEAMACGLPVVATD----VGDNAELV-GD--TGFLV-PPGDPE 320 (365)
T ss_pred ceEEEccccccHHHHHHhCCE--EEeCCccccCCcHHHHHHhcCCCEEEcC----CCChHHHh-hc--CCEEe-CCCCHH
Confidence 4566555444 3678888887 665433 479999999999999854 34455555 34 55555 334789
Q ss_pred HHHHHHHHHHhH
Q 012587 402 IVEKAVNDLMVE 413 (460)
Q Consensus 402 ~l~~~i~~~l~~ 413 (460)
++.+++.+++++
T Consensus 321 ~l~~~i~~l~~~ 332 (365)
T cd03807 321 ALAEAIEALLAD 332 (365)
T ss_pred HHHHHHHHHHhC
Confidence 999999999986
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=98.77 E-value=9.6e-06 Score=78.64 Aligned_cols=87 Identities=13% Similarity=0.146 Sum_probs=59.2
Q ss_pred cCCceeeeecCh-Hhhhccccccccccc----CChhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecCCcch
Q 012587 326 KERGCIAGWVPQ-EEVLAHSAVGGFLTH----CGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDR 400 (460)
Q Consensus 326 ~~n~~~~~~vp~-~~il~~~~~~~~I~H----GG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~~ 400 (460)
.+|+.+.++..+ ..++..+++ +|.- |..+++.||+++|+|+|+. |...+...+ +. .|..+ ...+.
T Consensus 244 ~~~v~~~g~~~~~~~~~~~ad~--~v~~s~~e~~~~~~~Ea~a~G~PvI~~----~~~~~~e~i-~~--~g~~~-~~~~~ 313 (360)
T cd04951 244 SNRVKLLGLRDDIAAYYNAADL--FVLSSAWEGFGLVVAEAMACELPVVAT----DAGGVREVV-GD--SGLIV-PISDP 313 (360)
T ss_pred CCcEEEecccccHHHHHHhhce--EEecccccCCChHHHHHHHcCCCEEEe----cCCChhhEe-cC--CceEe-CCCCH
Confidence 357888877654 678888887 4432 2257899999999999974 445555566 34 34344 33688
Q ss_pred HHHHHHHHHHHh-HhHHHHHHHHHH
Q 012587 401 NIVEKAVNDLMV-ERKEEFMESADR 424 (460)
Q Consensus 401 ~~l~~~i~~~l~-~~~~~~~~~a~~ 424 (460)
+++.+++.++++ + +.+++....
T Consensus 314 ~~~~~~i~~ll~~~--~~~~~~~~~ 336 (360)
T cd04951 314 EALANKIDEILKMS--GEERDIIGA 336 (360)
T ss_pred HHHHHHHHHHHhCC--HHHHHHHHH
Confidence 999999999984 4 455544443
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=6.5e-06 Score=80.14 Aligned_cols=128 Identities=15% Similarity=0.169 Sum_probs=76.6
Q ss_pred cEEEEEecCcccCCHHHHHHHHHHHhhC--CCcEEEEEccCCCCCCCCCCCCchHHHH-----HhcCCceeeeecCh--H
Q 012587 268 SVIYVSFGSIAVMSRDQLIEFYYGLVHS--KKSFLWVIRPDLISGKDGENQIPEELLE-----ATKERGCIAGWVPQ--E 338 (460)
Q Consensus 268 ~~V~vs~GS~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~-----~~~~n~~~~~~vp~--~ 338 (460)
+.+++..|.........+..+++++... +.++++ ++. |. ..+.+.+ ..++++.+.+|+++ .
T Consensus 180 ~~~i~~~Grl~~~~~k~~~~l~~a~~~~~~~~~l~i-vG~------g~---~~~~l~~~~~~~~l~~~v~f~G~~~~~~~ 249 (359)
T PRK09922 180 PAVFLYVGRLKFEGQKNVKELFDGLSQTTGEWQLHI-IGD------GS---DFEKCKAYSRELGIEQRIIWHGWQSQPWE 249 (359)
T ss_pred CcEEEEEEEEecccCcCHHHHHHHHHhhCCCeEEEE-EeC------Cc---cHHHHHHHHHHcCCCCeEEEecccCCcHH
Confidence 4556777776432223345566666654 334444 322 11 1122221 13468888898753 3
Q ss_pred ---hhhcccccccccc--c--CChhHHHHHHHhCCceeccc-ccccchhhHHHHHhhhceeeeecCCcchHHHHHHHHHH
Q 012587 339 ---EVLAHSAVGGFLT--H--CGWNSTLESIVAGMPMICWP-SFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDL 410 (460)
Q Consensus 339 ---~il~~~~~~~~I~--H--GG~gs~~eal~~GvP~l~~P-~~~DQ~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~ 410 (460)
+.+..+++ +|. + |-..++.||+++|+|+|+.- ..+ ....+ +....|..+ ..-+.+++.++|.++
T Consensus 250 ~~~~~~~~~d~--~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g----~~eiv-~~~~~G~lv-~~~d~~~la~~i~~l 321 (359)
T PRK09922 250 VVQQKIKNVSA--LLLTSKFEGFPMTLLEAMSYGIPCISSDCMSG----PRDII-KPGLNGELY-TPGNIDEFVGKLNKV 321 (359)
T ss_pred HHHHHHhcCcE--EEECCcccCcChHHHHHHHcCCCEEEeCCCCC----hHHHc-cCCCceEEE-CCCCHHHHHHHHHHH
Confidence 33445676 553 3 33579999999999999875 322 22344 444567777 456999999999999
Q ss_pred HhH
Q 012587 411 MVE 413 (460)
Q Consensus 411 l~~ 413 (460)
++|
T Consensus 322 ~~~ 324 (359)
T PRK09922 322 ISG 324 (359)
T ss_pred HhC
Confidence 997
|
|
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=98.69 E-value=3.4e-05 Score=74.62 Aligned_cols=80 Identities=21% Similarity=0.260 Sum_probs=58.4
Q ss_pred cCCceeeeecCh---Hhhhcccccccccc----------cCChhHHHHHHHhCCceecccccccchhhHHHHHhhhceee
Q 012587 326 KERGCIAGWVPQ---EEVLAHSAVGGFLT----------HCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGL 392 (460)
Q Consensus 326 ~~n~~~~~~vp~---~~il~~~~~~~~I~----------HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~ 392 (460)
++|+.+.+++|+ ..++..+++ +|. -|...++.||+++|+|+|+.+... ....+ +....|.
T Consensus 235 ~~~v~~~g~~~~~~l~~~~~~adi--~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~----~~~~i-~~~~~g~ 307 (355)
T cd03799 235 EDRVTLLGAKSQEEVRELLRAADL--FVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSG----IPELV-EDGETGL 307 (355)
T ss_pred CCeEEECCcCChHHHHHHHHhCCE--EEecceecCCCCccCccHHHHHHHHcCCCEEecCCCC----cchhh-hCCCceE
Confidence 468888999985 456677887 554 233579999999999999876422 23345 3434777
Q ss_pred eecCCcchHHHHHHHHHHHhH
Q 012587 393 DIKDLCDRNIVEKAVNDLMVE 413 (460)
Q Consensus 393 ~~~~~~~~~~l~~~i~~~l~~ 413 (460)
.. ..-+.+++.++|.+++++
T Consensus 308 ~~-~~~~~~~l~~~i~~~~~~ 327 (355)
T cd03799 308 LV-PPGDPEALADAIERLLDD 327 (355)
T ss_pred Ee-CCCCHHHHHHHHHHHHhC
Confidence 77 445899999999999986
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.2e-05 Score=77.16 Aligned_cols=80 Identities=20% Similarity=0.226 Sum_probs=54.9
Q ss_pred cCCceeeeecCh-Hhhhcccccccccc--c--CChhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecCCcch
Q 012587 326 KERGCIAGWVPQ-EEVLAHSAVGGFLT--H--CGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDR 400 (460)
Q Consensus 326 ~~n~~~~~~vp~-~~il~~~~~~~~I~--H--GG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~~ 400 (460)
.+++.+.++.+. ..++..+++ +|. + |..+++.||+++|+|+|+.... .....+ +..+.|... ..-+.
T Consensus 245 ~~~v~~~g~~~~~~~~~~~~d~--~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~----~~~e~i-~~~~~g~~~-~~~~~ 316 (353)
T cd03811 245 ADRVHFLGFQSNPYPYLKAADL--FVLSSRYEGFPNVLLEAMALGTPVVATDCP----GPREIL-EDGENGLLV-PVGDE 316 (353)
T ss_pred CccEEEecccCCHHHHHHhCCE--EEeCcccCCCCcHHHHHHHhCCCEEEcCCC----ChHHHh-cCCCceEEE-CCCCH
Confidence 457778888774 678888887 552 2 3356899999999999986443 455566 455677777 44566
Q ss_pred HHH---HHHHHHHHhH
Q 012587 401 NIV---EKAVNDLMVE 413 (460)
Q Consensus 401 ~~l---~~~i~~~l~~ 413 (460)
+.+ .+.+.+++++
T Consensus 317 ~~~~~~~~~i~~~~~~ 332 (353)
T cd03811 317 AALAAAALALLDLLLD 332 (353)
T ss_pred HHHHHHHHHHHhccCC
Confidence 776 4555555555
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.64 E-value=2.9e-05 Score=75.30 Aligned_cols=136 Identities=17% Similarity=0.157 Sum_probs=81.9
Q ss_pred CCcEEEEEecCccc-CCHHHHHHHHHHHhhC--CCcEEEEEccCCCCCCCCCCCCchHHHH-----HhcCCceeeeecCh
Q 012587 266 KQSVIYVSFGSIAV-MSRDQLIEFYYGLVHS--KKSFLWVIRPDLISGKDGENQIPEELLE-----ATKERGCIAGWVPQ 337 (460)
Q Consensus 266 ~~~~V~vs~GS~~~-~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~-----~~~~n~~~~~~vp~ 337 (460)
+.+.+++..|+... ...+.+-..+..+.+. +.+++++ +. |. ....+.+ ...+++.+.++..+
T Consensus 190 ~~~~~i~~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~iv-G~------g~---~~~~~~~~~~~~~~~~~v~~~g~~~~ 259 (358)
T cd03812 190 EDKFVIGHVGRFSEQKNHEFLIEIFAELLKKNPNAKLLLV-GD------GE---LEEEIKKKVKELGLEDKVIFLGVRND 259 (358)
T ss_pred CCCEEEEEEeccccccChHHHHHHHHHHHHhCCCeEEEEE-eC------Cc---hHHHHHHHHHhcCCCCcEEEecccCC
Confidence 44566677787653 2334444444444433 3344443 21 11 1111211 12467777777544
Q ss_pred -Hhhhccccccccccc----CChhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecCCcchHHHHHHHHHHHh
Q 012587 338 -EEVLAHSAVGGFLTH----CGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMV 412 (460)
Q Consensus 338 -~~il~~~~~~~~I~H----GG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~ 412 (460)
..++..+++ +|+- |-..++.||+++|+|+|+....+ ....+ +. +.|... ...++++++++|.++++
T Consensus 260 ~~~~~~~adi--~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~----~~~~i-~~-~~~~~~-~~~~~~~~a~~i~~l~~ 330 (358)
T cd03812 260 VPELLQAMDV--FLFPSLYEGLPLVLIEAQASGLPCILSDTIT----KEVDL-TD-LVKFLS-LDESPEIWAEEILKLKS 330 (358)
T ss_pred HHHHHHhcCE--EEecccccCCCHHHHHHHHhCCCEEEEcCCc----hhhhh-cc-CccEEe-CCCCHHHHHHHHHHHHh
Confidence 778888887 5532 44579999999999999865433 33345 34 566555 33468999999999999
Q ss_pred HhHHHHHHHH
Q 012587 413 ERKEEFMESA 422 (460)
Q Consensus 413 ~~~~~~~~~a 422 (460)
| +..+++.
T Consensus 331 ~--~~~~~~~ 338 (358)
T cd03812 331 E--DRRERSS 338 (358)
T ss_pred C--cchhhhh
Confidence 8 6655544
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.64 E-value=2.3e-05 Score=76.10 Aligned_cols=82 Identities=22% Similarity=0.267 Sum_probs=52.1
Q ss_pred hcCCceeeeecChHh---hhcccccccccccC----Ch-hHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecC
Q 012587 325 TKERGCIAGWVPQEE---VLAHSAVGGFLTHC----GW-NSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKD 396 (460)
Q Consensus 325 ~~~n~~~~~~vp~~~---il~~~~~~~~I~HG----G~-gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~ 396 (460)
..+++.+.+++++.+ ++..+++ ++.+. |. .++.||+++|+|+|+....+ +...+ +. .|....
T Consensus 246 ~~~~V~~~g~~~~~~~~~~~~~ad~--~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~----~~e~~-~~--~g~~~~- 315 (363)
T cd04955 246 ADPRIIFVGPIYDQELLELLRYAAL--FYLHGHSVGGTNPSLLEAMAYGCPVLASDNPF----NREVL-GD--KAIYFK- 315 (363)
T ss_pred CCCcEEEccccChHHHHHHHHhCCE--EEeCCccCCCCChHHHHHHHcCCCEEEecCCc----cceee-cC--CeeEec-
Confidence 346888899999864 5666676 44433 32 58999999999999875432 22223 22 333332
Q ss_pred CcchHHHHHHHHHHHhHhHHHHHH
Q 012587 397 LCDRNIVEKAVNDLMVERKEEFME 420 (460)
Q Consensus 397 ~~~~~~l~~~i~~~l~~~~~~~~~ 420 (460)
.-+ .+.+++.+++++ ++..+
T Consensus 316 ~~~--~l~~~i~~l~~~--~~~~~ 335 (363)
T cd04955 316 VGD--DLASLLEELEAD--PEEVS 335 (363)
T ss_pred Cch--HHHHHHHHHHhC--HHHHH
Confidence 112 299999999987 54433
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=98.63 E-value=0.00012 Score=78.34 Aligned_cols=89 Identities=16% Similarity=0.243 Sum_probs=59.9
Q ss_pred cCCceeeeecChHh---hhccc----cccccccc---CCh-hHHHHHHHhCCceecccccccchhhHHHHHhhhceeeee
Q 012587 326 KERGCIAGWVPQEE---VLAHS----AVGGFLTH---CGW-NSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDI 394 (460)
Q Consensus 326 ~~n~~~~~~vp~~~---il~~~----~~~~~I~H---GG~-gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~ 394 (460)
.++|.+.+++++.+ ++..+ ++ ||.- =|+ .++.||+++|+|+|+....+ ....+ +....|..+
T Consensus 547 ~g~V~FlG~v~~edvp~lYr~Ad~s~DV--FV~PS~~EgFGLvlLEAMAcGlPVVASdvGG----~~EII-~~g~nGlLV 619 (1050)
T TIGR02468 547 YGQVAYPKHHKQSDVPDIYRLAAKTKGV--FINPAFIEPFGLTLIEAAAHGLPMVATKNGG----PVDIH-RVLDNGLLV 619 (1050)
T ss_pred CCeEEecCCCCHHHHHHHHHHhhhcCCe--eeCCcccCCCCHHHHHHHHhCCCEEEeCCCC----cHHHh-ccCCcEEEE
Confidence 46777778888754 45544 34 6653 343 58999999999999986433 22333 233457666
Q ss_pred cCCcchHHHHHHHHHHHhHhHHHHHHHHHH
Q 012587 395 KDLCDRNIVEKAVNDLMVERKEEFMESADR 424 (460)
Q Consensus 395 ~~~~~~~~l~~~i~~~l~~~~~~~~~~a~~ 424 (460)
...+.+.|+++|.++++| +..+++..+
T Consensus 620 -dP~D~eaLA~AL~~LL~D--pelr~~m~~ 646 (1050)
T TIGR02468 620 -DPHDQQAIADALLKLVAD--KQLWAECRQ 646 (1050)
T ss_pred -CCCCHHHHHHHHHHHhhC--HHHHHHHHH
Confidence 456889999999999997 665544433
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.63 E-value=0.00028 Score=67.30 Aligned_cols=308 Identities=16% Similarity=0.180 Sum_probs=172.6
Q ss_pred cCCCCCCHHHHHHHHHHHHhC--CCeEEEEe-CccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCCCCChHHH
Q 012587 13 PLPAVGHVNSMLNLAELLGHA--GIKITFLN-TEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPDKFPEL 89 (460)
Q Consensus 13 ~~~~~Gh~~p~l~La~~L~~r--GH~Vt~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (460)
=.-+.|-++-.++|.++|+++ ++.+++-+ ++...+.+.+..++ .+...-+| -+
T Consensus 55 HaaSVGEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~~~---------~v~h~YlP----~D----------- 110 (419)
T COG1519 55 HAASVGEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALFGD---------SVIHQYLP----LD----------- 110 (419)
T ss_pred EecchhHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHcCC---------CeEEEecC----cC-----------
Confidence 334789999999999999999 88888888 55667777666441 12222222 11
Q ss_pred HHHHHhhCcHHHHHHHHcCCCCccEEE-EcCCcc-hHHHHHHHhCCceEEEecchhHHHHHHhhccccccCCCCCCCCCc
Q 012587 90 VDSLNCATPPLLKEMVSDSKSPVNCII-TDGYMS-RAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELPIKGFL 167 (460)
Q Consensus 90 ~~~~~~~~~~~l~~~~~~~~~~pD~vv-~D~~~~-~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 167 (460)
....++..++.+ +||++| .++-.| ....-+++.|+|.+.++-=-. .. +
T Consensus 111 -------~~~~v~rFl~~~--~P~l~Ii~EtElWPnli~e~~~~~~p~~LvNaRLS----------~r---S-------- 160 (419)
T COG1519 111 -------LPIAVRRFLRKW--RPKLLIIMETELWPNLINELKRRGIPLVLVNARLS----------DR---S-------- 160 (419)
T ss_pred -------chHHHHHHHHhc--CCCEEEEEeccccHHHHHHHHHcCCCEEEEeeeec----------hh---h--------
Confidence 224567778887 999876 554444 456667789999999764210 00 0
Q ss_pred cCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCC-CceeEeCccccccccCCCccccC
Q 012587 168 RCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSC-PNIYSIGPLNAHLKVRIPEKTYS 246 (460)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~-~~~~~vG~~~~~~~~~~~~~~~~ 246 (460)
+. .-...+.+.+.. ..+.+.++..+-.+ -..+ .. .. +++...|-+-......+
T Consensus 161 --------~~----~y~k~~~~~~~~--~~~i~li~aQse~D--~~Rf---~~-LGa~~v~v~GNlKfd~~~~~------ 214 (419)
T COG1519 161 --------FA----RYAKLKFLARLL--FKNIDLILAQSEED--AQRF---RS-LGAKPVVVTGNLKFDIEPPP------ 214 (419)
T ss_pred --------hH----HHHHHHHHHHHH--HHhcceeeecCHHH--HHHH---Hh-cCCcceEEecceeecCCCCh------
Confidence 00 000111111111 24455666666322 1111 22 22 45677776543322110
Q ss_pred CCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCC--CcEEEEEccCCCCCCCCCCCCch--HHH
Q 012587 247 SSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSK--KSFLWVIRPDLISGKDGENQIPE--ELL 322 (460)
Q Consensus 247 ~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~--~~~i~~~~~~~~~~~~~~~~~~~--~~~ 322 (460)
....+...|-..-++...++|..+|.. ...+.+.....++.+.. ...||+ .-+ ++..+. ++.
T Consensus 215 -----~~~~~~~~~r~~l~~~r~v~iaaSTH~-GEeei~l~~~~~l~~~~~~~llIlV-PRH-------pERf~~v~~l~ 280 (419)
T COG1519 215 -----QLAAELAALRRQLGGHRPVWVAASTHE-GEEEIILDAHQALKKQFPNLLLILV-PRH-------PERFKAVENLL 280 (419)
T ss_pred -----hhHHHHHHHHHhcCCCCceEEEecCCC-chHHHHHHHHHHHHhhCCCceEEEe-cCC-------hhhHHHHHHHH
Confidence 112223333332222133446666632 33344444555555432 333443 211 000100 000
Q ss_pred HH---------------hcCCceeeeecC-hHhhhcccccccc-----cccCChhHHHHHHHhCCceecccccccchhhH
Q 012587 323 EA---------------TKERGCIAGWVP-QEEVLAHSAVGGF-----LTHCGWNSTLESIVAGMPMICWPSFADQQINS 381 (460)
Q Consensus 323 ~~---------------~~~n~~~~~~vp-~~~il~~~~~~~~-----I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na 381 (460)
.+ ...++.+.+-+- ...++.-+++ +| +-+||+| ..|++++|+|++.=|+...|.+-+
T Consensus 281 ~~~gl~~~~rS~~~~~~~~tdV~l~DtmGEL~l~y~~adi-AFVGGSlv~~GGHN-~LEpa~~~~pvi~Gp~~~Nf~ei~ 358 (419)
T COG1519 281 KRKGLSVTRRSQGDPPFSDTDVLLGDTMGELGLLYGIADI-AFVGGSLVPIGGHN-PLEPAAFGTPVIFGPYTFNFSDIA 358 (419)
T ss_pred HHcCCeEEeecCCCCCCCCCcEEEEecHhHHHHHHhhccE-EEECCcccCCCCCC-hhhHHHcCCCEEeCCccccHHHHH
Confidence 00 123566666554 3455555555 44 4588887 579999999999999999999999
Q ss_pred HHHHhhhceeeeecCCcchHHHHHHHHHHHhHhHHHHHHHH
Q 012587 382 RFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVERKEEFMESA 422 (460)
Q Consensus 382 ~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~a 422 (460)
+++ ++.|.|+.++ +.+.|.+++..+++| +..+++.
T Consensus 359 ~~l-~~~ga~~~v~---~~~~l~~~v~~l~~~--~~~r~~~ 393 (419)
T COG1519 359 ERL-LQAGAGLQVE---DADLLAKAVELLLAD--EDKREAY 393 (419)
T ss_pred HHH-HhcCCeEEEC---CHHHHHHHHHHhcCC--HHHHHHH
Confidence 999 5889999994 388888888888886 4444444
|
|
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=98.55 E-value=7.1e-05 Score=73.19 Aligned_cols=75 Identities=13% Similarity=0.170 Sum_probs=52.2
Q ss_pred CCceee-eecChHhh---hcccccccccc----c--CC-hhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeec
Q 012587 327 ERGCIA-GWVPQEEV---LAHSAVGGFLT----H--CG-WNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIK 395 (460)
Q Consensus 327 ~n~~~~-~~vp~~~i---l~~~~~~~~I~----H--GG-~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~ 395 (460)
+|+.+. .|+|+.++ |+.+++ +|. . -| -+++.||+++|+|+|+.... .+...+ +.-+.|..++
T Consensus 286 ~~v~~~~~~~~~~~~~~~l~~aDv--~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~g----g~~eiv-~~g~~G~lv~ 358 (371)
T PLN02275 286 RHVAFRTMWLEAEDYPLLLGSADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIGELV-KDGKNGLLFS 358 (371)
T ss_pred CceEEEcCCCCHHHHHHHHHhCCE--EEEeccccccccccHHHHHHHHCCCCEEEecCC----ChHHHc-cCCCCeEEEC
Confidence 456655 47887555 889998 552 1 12 35799999999999997532 245555 4556788874
Q ss_pred CCcchHHHHHHHHHHH
Q 012587 396 DLCDRNIVEKAVNDLM 411 (460)
Q Consensus 396 ~~~~~~~l~~~i~~~l 411 (460)
+.++|.+++.++|
T Consensus 359 ---~~~~la~~i~~l~ 371 (371)
T PLN02275 359 ---SSSELADQLLELL 371 (371)
T ss_pred ---CHHHHHHHHHHhC
Confidence 5888988888774
|
|
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=98.53 E-value=0.00022 Score=70.04 Aligned_cols=135 Identities=16% Similarity=0.160 Sum_probs=76.2
Q ss_pred cEEEEEecCcccCCHHHHHHHHHHHhhC--CCcEEEEEccCCCCCCCCCCCCchHHHHH---h---cCCceee-eecCh-
Q 012587 268 SVIYVSFGSIAVMSRDQLIEFYYGLVHS--KKSFLWVIRPDLISGKDGENQIPEELLEA---T---KERGCIA-GWVPQ- 337 (460)
Q Consensus 268 ~~V~vs~GS~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~---~---~~n~~~~-~~vp~- 337 (460)
..+++..|.... ...+..++++++.+ +.++++..++. ....+...+.+. . .+++.+. +++++
T Consensus 201 ~~~i~~~Grl~~--~Kg~~~li~a~~~l~~~~~l~i~g~g~------~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 272 (388)
T TIGR02149 201 RPYILFVGRITR--QKGVPHLLDAVHYIPKDVQVVLCAGAP------DTPEVAEEVRQAVALLDRNRTGIIWINKMLPKE 272 (388)
T ss_pred ceEEEEEccccc--ccCHHHHHHHHHHHhhcCcEEEEeCCC------CcHHHHHHHHHHHHHhccccCceEEecCCCCHH
Confidence 445566777653 22344555556554 45555554321 100111111111 1 1235544 67775
Q ss_pred --Hhhhccccccccccc----CChhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecCCcch------HHHHH
Q 012587 338 --EEVLAHSAVGGFLTH----CGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDR------NIVEK 405 (460)
Q Consensus 338 --~~il~~~~~~~~I~H----GG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~~------~~l~~ 405 (460)
..++..+++ +|.= |...++.||+++|+|+|+... ......+ +..+.|..++ .-+. +.+.+
T Consensus 273 ~~~~~~~~aDv--~v~ps~~e~~g~~~lEA~a~G~PvI~s~~----~~~~e~i-~~~~~G~~~~-~~~~~~~~~~~~l~~ 344 (388)
T TIGR02149 273 ELVELLSNAEV--FVCPSIYEPLGIVNLEAMACGTPVVASAT----GGIPEVV-VDGETGFLVP-PDNSDADGFQAELAK 344 (388)
T ss_pred HHHHHHHhCCE--EEeCCccCCCChHHHHHHHcCCCEEEeCC----CCHHHHh-hCCCceEEcC-CCCCcccchHHHHHH
Confidence 556788887 5532 223577999999999998654 2344555 4445687775 2233 88999
Q ss_pred HHHHHHhHhHHHHHH
Q 012587 406 AVNDLMVERKEEFME 420 (460)
Q Consensus 406 ~i~~~l~~~~~~~~~ 420 (460)
+|.++++| +..++
T Consensus 345 ~i~~l~~~--~~~~~ 357 (388)
T TIGR02149 345 AINILLAD--PELAK 357 (388)
T ss_pred HHHHHHhC--HHHHH
Confidence 99999987 55443
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=98.53 E-value=0.00011 Score=72.77 Aligned_cols=72 Identities=18% Similarity=0.205 Sum_probs=51.1
Q ss_pred eeeecChHhhhcccccccccccC----ChhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecCCcchHHHHHH
Q 012587 331 IAGWVPQEEVLAHSAVGGFLTHC----GWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKA 406 (460)
Q Consensus 331 ~~~~vp~~~il~~~~~~~~I~HG----G~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~~~~l~~~ 406 (460)
+.++....+++..+++ ||.-+ =..++.||+++|+|+|+.-..+ + ..+ ..-+-|... -+.+++.++
T Consensus 288 f~G~~~~~~~~~~~Dv--Fv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~----~-~~v-~~~~ng~~~---~~~~~~a~a 356 (462)
T PLN02846 288 YPGRDHADPLFHDYKV--FLNPSTTDVVCTTTAEALAMGKIVVCANHPS----N-EFF-KQFPNCRTY---DDGKGFVRA 356 (462)
T ss_pred ECCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCcEEEecCCC----c-cee-ecCCceEec---CCHHHHHHH
Confidence 3466667779988887 77663 3478999999999999886443 2 334 233444444 368899999
Q ss_pred HHHHHhH
Q 012587 407 VNDLMVE 413 (460)
Q Consensus 407 i~~~l~~ 413 (460)
+.++|++
T Consensus 357 i~~~l~~ 363 (462)
T PLN02846 357 TLKALAE 363 (462)
T ss_pred HHHHHcc
Confidence 9999984
|
|
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.47 E-value=0.00023 Score=71.89 Aligned_cols=134 Identities=12% Similarity=0.110 Sum_probs=74.0
Q ss_pred CcEEEEEecCccc-CCHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHH---HHhcCCcee-eeecCh--Hh
Q 012587 267 QSVIYVSFGSIAV-MSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELL---EATKERGCI-AGWVPQ--EE 339 (460)
Q Consensus 267 ~~~V~vs~GS~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~n~~~-~~~vp~--~~ 339 (460)
+..+++..|.+.. ...+.+...+..+.+.+.+++++-. |.. ...+.+. ++.+.++.+ .+|-.. ..
T Consensus 281 ~~~~i~~vGRl~~~KG~~~li~a~~~l~~~~~~lvivG~-------g~~-~~~~~l~~l~~~~~~~v~~~~g~~~~~~~~ 352 (466)
T PRK00654 281 DAPLFAMVSRLTEQKGLDLVLEALPELLEQGGQLVLLGT-------GDP-ELEEAFRALAARYPGKVGVQIGYDEALAHR 352 (466)
T ss_pred CCcEEEEeeccccccChHHHHHHHHHHHhcCCEEEEEec-------CcH-HHHHHHHHHHHHCCCcEEEEEeCCHHHHHH
Confidence 3445667777653 2233333333333333667666532 110 1112222 234456554 355322 35
Q ss_pred hhcccccccccc---cCChh-HHHHHHHhCCceecccccc--cchhhHHHHHhhhceeeeecCCcchHHHHHHHHHHHh
Q 012587 340 VLAHSAVGGFLT---HCGWN-STLESIVAGMPMICWPSFA--DQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMV 412 (460)
Q Consensus 340 il~~~~~~~~I~---HGG~g-s~~eal~~GvP~l~~P~~~--DQ~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~ 412 (460)
+++.+++ +|. +-|.| +.+||+++|+|.|+....+ |.-.+...-. .-+.|..+ ..-++++|.+++.++++
T Consensus 353 ~~~~aDv--~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~-~~~~G~lv-~~~d~~~la~~i~~~l~ 427 (466)
T PRK00654 353 IYAGADM--FLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPED-GEATGFVF-DDFNAEDLLRALRRALE 427 (466)
T ss_pred HHhhCCE--EEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCC-CCCceEEe-CCCCHHHHHHHHHHHHH
Confidence 7888887 553 34554 8899999999999875432 3221111111 22678887 45688999999999886
|
|
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.46 E-value=0.00015 Score=69.72 Aligned_cols=195 Identities=13% Similarity=0.076 Sum_probs=104.7
Q ss_pred hhcCCCceeEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhh---C
Q 012587 219 RNHSCPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVH---S 295 (460)
Q Consensus 219 ~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~---~ 295 (460)
.. ..-++.+||-.....-... ..+....+.+ -..++++|.+-.||-...=...+..+.++.+. .
T Consensus 149 ~~-~g~~~~~VGHPl~d~~~~~-----------~~~~~~~~~~-l~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~ 215 (373)
T PF02684_consen 149 KK-HGVPVTYVGHPLLDEVKPE-----------PDRAEAREKL-LDPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQ 215 (373)
T ss_pred hc-cCCCeEEECCcchhhhccC-----------CCHHHHHHhc-CCCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 44 4467999995443322111 1122222232 23478999999998763323334444444443 2
Q ss_pred --CCcEEEEEccCCCCCCCCCCCCchHHHH---HhcCCceee-eecChHhhhcccccccccccCChhHHHHHHHhCCcee
Q 012587 296 --KKSFLWVIRPDLISGKDGENQIPEELLE---ATKERGCIA-GWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMI 369 (460)
Q Consensus 296 --~~~~i~~~~~~~~~~~~~~~~~~~~~~~---~~~~n~~~~-~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l 369 (460)
+.++++..... .....+.+ ....++.+. ..-.-.++|..+++ ++++.| ..++|+..+|+|||
T Consensus 216 ~p~l~fvvp~a~~---------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~m~~ad~-al~~SG--TaTLE~Al~g~P~V 283 (373)
T PF02684_consen 216 RPDLQFVVPVAPE---------VHEELIEEILAEYPPDVSIVIIEGESYDAMAAADA-ALAASG--TATLEAALLGVPMV 283 (373)
T ss_pred CCCeEEEEecCCH---------HHHHHHHHHHHhhCCCCeEEEcCCchHHHHHhCcc-hhhcCC--HHHHHHHHhCCCEE
Confidence 44555554211 11111111 112233333 22245678888887 455554 46889999999999
Q ss_pred cccccc-cchhhHHHHHhhhc------------eeeee-cCCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhc
Q 012587 370 CWPSFA-DQQINSRFVGEVWK------------LGLDI-KDLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNK 435 (460)
Q Consensus 370 ~~P~~~-DQ~~na~~~~e~~G------------~g~~~-~~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~ 435 (460)
++=-.. =-...|+++. +.. +-..+ ++++|++.|.+++.++|+| +..++......+.+++..+.
T Consensus 284 v~Yk~~~lt~~iak~lv-k~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~~~ll~~--~~~~~~~~~~~~~~~~~~~~ 360 (373)
T PF02684_consen 284 VAYKVSPLTYFIAKRLV-KVKYISLPNIIAGREVVPELIQEDATPENIAAELLELLEN--PEKRKKQKELFREIRQLLGP 360 (373)
T ss_pred EEEcCcHHHHHHHHHhh-cCCEeechhhhcCCCcchhhhcccCCHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHhhhh
Confidence 874221 1223344442 211 11111 2489999999999999998 65565555666666665444
Q ss_pred CCChHH
Q 012587 436 GGSSYC 441 (460)
Q Consensus 436 ~g~~~~ 441 (460)
|.++..
T Consensus 361 ~~~~~~ 366 (373)
T PF02684_consen 361 GASSRA 366 (373)
T ss_pred ccCCHH
Confidence 555443
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=98.45 E-value=0.00019 Score=70.25 Aligned_cols=83 Identities=16% Similarity=0.136 Sum_probs=57.7
Q ss_pred CCceeeeecC-hHhhhccccccccc--cc--CChhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecCCcchH
Q 012587 327 ERGCIAGWVP-QEEVLAHSAVGGFL--TH--CGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRN 401 (460)
Q Consensus 327 ~n~~~~~~vp-~~~il~~~~~~~~I--~H--GG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~~~ 401 (460)
+++.+.++.. -..++..+++ +| ++ |-..++.||+++|+|+|+.... .+...+ +.-..|..+ ..-+.+
T Consensus 255 ~~v~~~g~~~~~~~~~~~adi--~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~----g~~e~i-~~~~~g~~~-~~~d~~ 326 (374)
T TIGR03088 255 HLVWLPGERDDVPALMQALDL--FVLPSLAEGISNTILEAMASGLPVIATAVG----GNPELV-QHGVTGALV-PPGDAV 326 (374)
T ss_pred ceEEEcCCcCCHHHHHHhcCE--EEeccccccCchHHHHHHHcCCCEEEcCCC----CcHHHh-cCCCceEEe-CCCCHH
Confidence 4555555544 3788889998 55 33 3357999999999999997643 344455 343457666 446789
Q ss_pred HHHHHHHHHHhHhHHHHH
Q 012587 402 IVEKAVNDLMVERKEEFM 419 (460)
Q Consensus 402 ~l~~~i~~~l~~~~~~~~ 419 (460)
++.+++.+++++ +..+
T Consensus 327 ~la~~i~~l~~~--~~~~ 342 (374)
T TIGR03088 327 ALARALQPYVSD--PAAR 342 (374)
T ss_pred HHHHHHHHHHhC--HHHH
Confidence 999999999986 5433
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.42 E-value=6.9e-05 Score=72.55 Aligned_cols=92 Identities=17% Similarity=0.162 Sum_probs=61.8
Q ss_pred hcCCceeeeecChH---hhhccccccccccc----CChhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecCC
Q 012587 325 TKERGCIAGWVPQE---EVLAHSAVGGFLTH----CGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDL 397 (460)
Q Consensus 325 ~~~n~~~~~~vp~~---~il~~~~~~~~I~H----GG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~ 397 (460)
..+|+.+.+++|+. .++..+++ +|.- |...++.||+++|+|+|+.... .....+ .. .|..+ ..
T Consensus 251 ~~~~v~~~g~~~~~~~~~~~~~~d~--~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~----~~~e~~-~~--~~~~~-~~ 320 (365)
T cd03809 251 LGDRVRFLGYVSDEELAALYRGARA--FVFPSLYEGFGLPVLEAMACGTPVIASNIS----SLPEVA-GD--AALYF-DP 320 (365)
T ss_pred CCCeEEECCCCChhHHHHHHhhhhh--hcccchhccCCCCHHHHhcCCCcEEecCCC----Ccccee-cC--ceeee-CC
Confidence 45688888999875 56778887 4432 3346899999999999986542 122223 23 34444 33
Q ss_pred cchHHHHHHHHHHHhHhHHHHHHHHHHHHHH
Q 012587 398 CDRNIVEKAVNDLMVERKEEFMESADRMANL 428 (460)
Q Consensus 398 ~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~ 428 (460)
.+.+++.+++.++++| +..+.+..+-+..
T Consensus 321 ~~~~~~~~~i~~l~~~--~~~~~~~~~~~~~ 349 (365)
T cd03809 321 LDPEALAAAIERLLED--PALREELRERGLA 349 (365)
T ss_pred CCHHHHHHHHHHHhcC--HHHHHHHHHHHHH
Confidence 4889999999999987 7766655554443
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=98.42 E-value=0.00038 Score=70.19 Aligned_cols=177 Identities=14% Similarity=0.064 Sum_probs=91.1
Q ss_pred hhcCCCceeEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHh--hC-
Q 012587 219 RNHSCPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLV--HS- 295 (460)
Q Consensus 219 ~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~--~~- 295 (460)
+. ..-++.+||-...+.-... ...++..+-+...+++++|-+-.||-...=...+..+.++.+ .+
T Consensus 377 ~~-~gv~v~yVGHPL~d~i~~~-----------~~~~~~r~~lgl~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~ 444 (608)
T PRK01021 377 KD-SPLRTVYLGHPLVETISSF-----------SPNLSWKEQLHLPSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLA 444 (608)
T ss_pred Hh-cCCCeEEECCcHHhhcccC-----------CCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 44 5578999995443322100 112222222332346799999999876433344555666665 33
Q ss_pred -CCcEEEEEccCCCCCCCCCCCCchHHHHHhc-CC---ceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceec
Q 012587 296 -KKSFLWVIRPDLISGKDGENQIPEELLEATK-ER---GCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMIC 370 (460)
Q Consensus 296 -~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~n---~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~ 370 (460)
+.++++..... ...+.+.+... .+ +.++.--...++++.|++ .+.-.|. .++|+..+|+|||+
T Consensus 445 ~~l~fvvp~a~~---------~~~~~i~~~~~~~~~~~~~ii~~~~~~~~m~aaD~--aLaaSGT-aTLEaAL~g~PmVV 512 (608)
T PRK01021 445 STHQLLVSSANP---------KYDHLILEVLQQEGCLHSHIVPSQFRYELMRECDC--ALAKCGT-IVLETALNQTPTIV 512 (608)
T ss_pred cCeEEEEecCch---------hhHHHHHHHHhhcCCCCeEEecCcchHHHHHhcCe--eeecCCH-HHHHHHHhCCCEEE
Confidence 34555543211 11112222121 12 122211012688988997 5555543 57899999999998
Q ss_pred ccccc-cchhhHHHHHhh--------------hceeeeec---CCcchHHHHHHHHHHHhHhHHHHHHHHH
Q 012587 371 WPSFA-DQQINSRFVGEV--------------WKLGLDIK---DLCDRNIVEKAVNDLMVERKEEFMESAD 423 (460)
Q Consensus 371 ~P~~~-DQ~~na~~~~e~--------------~G~g~~~~---~~~~~~~l~~~i~~~l~~~~~~~~~~a~ 423 (460)
+=-.. =-..-|+++. + ..+-..+- +++|++.|.+++ ++|.| +..+++.+
T Consensus 513 ~YK~s~Lty~Iak~Lv-ki~i~yIsLpNIIagr~VvPEllqgQ~~~tpe~La~~l-~lL~d--~~~r~~~~ 579 (608)
T PRK01021 513 TCQLRPFDTFLAKYIF-KIILPAYSLPNIILGSTIFPEFIGGKKDFQPEEVAAAL-DILKT--SQSKEKQK 579 (608)
T ss_pred EEecCHHHHHHHHHHH-hccCCeeehhHHhcCCCcchhhcCCcccCCHHHHHHHH-HHhcC--HHHHHHHH
Confidence 63211 1122344443 2 11111111 368999999997 77776 54443333
|
|
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.40 E-value=7.9e-05 Score=70.33 Aligned_cols=331 Identities=14% Similarity=0.123 Sum_probs=178.9
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCC-CeEEEEeCccch--hHHhhccccccccccCCCCceEEecC-CCCCCCC
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAG-IKITFLNTEHYY--DRVIRHSSDAFSRYMQIPGFQFKTLT-DGLPRDH 79 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~rG-H~Vt~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 79 (460)
|+|+||+++ +|++=.++-+-+|.+++.+.+ -+..++.+..++ +..... ++...++ +.+.-..
T Consensus 1 m~~~Kv~~I-~GTRPE~iKmapli~~~~~~~~~~~~vi~TGQH~d~em~~~~-------------le~~~i~~pdy~L~i 66 (383)
T COG0381 1 MKMLKVLTI-FGTRPEAIKMAPLVKALEKDPDFELIVIHTGQHRDYEMLDQV-------------LELFGIRKPDYDLNI 66 (383)
T ss_pred CCceEEEEE-EecCHHHHHHhHHHHHHHhCCCCceEEEEecccccHHHHHHH-------------HHHhCCCCCCcchhc
Confidence 356676654 689999999999999999997 666666554555 222211 2222222 1122222
Q ss_pred CCCCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEE--cCCcc-hHHHHHHHhCCceEEEecchhHHHHHHhhccccc
Q 012587 80 PRTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIIT--DGYMS-RAIDAAREVGVSIIYFRTISACAFWSFHCIPDII 156 (460)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~--D~~~~-~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 156 (460)
....++......... ..+.+++.+. +||+|+. |..+. ++.++|.+.+||+.-+.-.--+.
T Consensus 67 ~~~~~tl~~~t~~~i----~~~~~vl~~~--kPD~VlVhGDT~t~lA~alaa~~~~IpV~HvEAGlRt~----------- 129 (383)
T COG0381 67 MKPGQTLGEITGNII----EGLSKVLEEE--KPDLVLVHGDTNTTLAGALAAFYLKIPVGHVEAGLRTG----------- 129 (383)
T ss_pred cccCCCHHHHHHHHH----HHHHHHHHhh--CCCEEEEeCCcchHHHHHHHHHHhCCceEEEecccccC-----------
Confidence 222344444444443 6678888886 9999985 44433 56899999999998865532100
Q ss_pred cCCCCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCCC-ceeEeCccccc
Q 012587 157 DAGELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCP-NIYSIGPLNAH 235 (460)
Q Consensus 157 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~~-~~~~vG~~~~~ 235 (460)
+.. ..+...+.+.. .-+...+..+-- ..-...+....+ +++.+|-....
T Consensus 130 --------------~~~-------~PEE~NR~l~~-----~~S~~hfapte~----ar~nLl~EG~~~~~IfvtGnt~iD 179 (383)
T COG0381 130 --------------DLY-------FPEEINRRLTS-----HLSDLHFAPTEI----ARKNLLREGVPEKRIFVTGNTVID 179 (383)
T ss_pred --------------CCC-------CcHHHHHHHHH-----HhhhhhcCChHH----HHHHHHHcCCCccceEEeCChHHH
Confidence 000 01111111111 111122222211 111111221223 47777743221
Q ss_pred cccCCCccccCCCCccccchhhhhh-hhcCCCCcEEEEEecCcccCCHHHHHHHHH----HHhhC-CCcEEEEEccCCCC
Q 012587 236 LKVRIPEKTYSSSSLWKIDRSCMAW-LDKQPKQSVIYVSFGSIAVMSRDQLIEFYY----GLVHS-KKSFLWVIRPDLIS 309 (460)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~l~~~-l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~----al~~~-~~~~i~~~~~~~~~ 309 (460)
.-.. +.+....+.....- +. ..++..|++|+=-..+.. +.++.+.+ .+++. ++.+|..+-.. .
T Consensus 180 al~~-------~~~~~~~~~~~~~~~~~-~~~~~~iLvT~HRreN~~-~~~~~i~~al~~i~~~~~~~~viyp~H~~--~ 248 (383)
T COG0381 180 ALLN-------TRDRVLEDSKILAKGLD-DKDKKYILVTAHRRENVG-EPLEEICEALREIAEEYPDVIVIYPVHPR--P 248 (383)
T ss_pred HHHH-------HHhhhccchhhHHhhhc-cccCcEEEEEcchhhccc-ccHHHHHHHHHHHHHhCCCceEEEeCCCC--h
Confidence 1100 00000111112211 22 335678999875544444 33444444 44444 44555544211 0
Q ss_pred CCCCCCCCchHHHHHhc--CCceee---eecChHhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHHHH
Q 012587 310 GKDGENQIPEELLEATK--ERGCIA---GWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFV 384 (460)
Q Consensus 310 ~~~~~~~~~~~~~~~~~--~n~~~~---~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~ 384 (460)
.+..-...++. +|+.+. +|.++..++.++-+ ++|-.|. -.-||-..|+|.+++=...++++ ++
T Consensus 249 ------~v~e~~~~~L~~~~~v~li~pl~~~~f~~L~~~a~~--iltDSGg-iqEEAp~lg~Pvl~lR~~TERPE---~v 316 (383)
T COG0381 249 ------RVRELVLKRLKNVERVKLIDPLGYLDFHNLMKNAFL--ILTDSGG-IQEEAPSLGKPVLVLRDTTERPE---GV 316 (383)
T ss_pred ------hhhHHHHHHhCCCCcEEEeCCcchHHHHHHHHhceE--EEecCCc-hhhhHHhcCCcEEeeccCCCCcc---ce
Confidence 01110012233 356665 77788999999987 8888763 46799999999999999999986 44
Q ss_pred HhhhceeeeecCCcchHHHHHHHHHHHhHhHHHHHHHHHH
Q 012587 385 GEVWKLGLDIKDLCDRNIVEKAVNDLMVERKEEFMESADR 424 (460)
Q Consensus 385 ~e~~G~g~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~a~~ 424 (460)
+ .|.-+.+ ..+.+.|.+++.+++++ +++.++-..
T Consensus 317 -~-agt~~lv--g~~~~~i~~~~~~ll~~--~~~~~~m~~ 350 (383)
T COG0381 317 -E-AGTNILV--GTDEENILDAATELLED--EEFYERMSN 350 (383)
T ss_pred -e-cCceEEe--CccHHHHHHHHHHHhhC--hHHHHHHhc
Confidence 3 4655555 25679999999999998 666665444
|
|
| >KOG3349 consensus Predicted glycosyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.37 E-value=1.4e-06 Score=69.78 Aligned_cols=111 Identities=17% Similarity=0.188 Sum_probs=73.6
Q ss_pred CcEEEEEecCcccCCHHHH-----HHHHHHHhhCCC-cEEEEEccCCCCCCCCCCCCchHHHH-HhcCCcee--eeecCh
Q 012587 267 QSVIYVSFGSIAVMSRDQL-----IEFYYGLVHSKK-SFLWVIRPDLISGKDGENQIPEELLE-ATKERGCI--AGWVPQ 337 (460)
Q Consensus 267 ~~~V~vs~GS~~~~~~~~~-----~~~~~al~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~n~~~--~~~vp~ 337 (460)
...+|||-||..- ++++ +...+.+.+.|+ +.|+..+.+... .++.... +..+.+.+ .+|-|-
T Consensus 3 ~~~vFVTVGtT~F--d~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg~~~-------~~d~~~~~~k~~gl~id~y~f~ps 73 (170)
T KOG3349|consen 3 LMTVFVTVGTTSF--DDLISCVLSEEFLQELQKRGFTKLIIQIGRGQPF-------FGDPIDLIRKNGGLTIDGYDFSPS 73 (170)
T ss_pred ceEEEEEeccccH--HHHHHHHcCHHHHHHHHHcCccEEEEEecCCccC-------CCCHHHhhcccCCeEEEEEecCcc
Confidence 3579999998761 2222 234566667775 567777654211 1111110 12233333 477884
Q ss_pred -HhhhcccccccccccCChhHHHHHHHhCCceecccc----cccchhhHHHHHhhhc
Q 012587 338 -EEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPS----FADQQINSRFVGEVWK 389 (460)
Q Consensus 338 -~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~----~~DQ~~na~~~~e~~G 389 (460)
.+..+.+++ +|+|+|.||++|.|..|+|.++++. ...|.+-|..++ +.|
T Consensus 74 l~e~I~~Adl--VIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~-~eg 127 (170)
T KOG3349|consen 74 LTEDIRSADL--VISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLA-EEG 127 (170)
T ss_pred HHHHHhhccE--EEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHH-hcC
Confidence 666667887 9999999999999999999999995 357999998885 434
|
|
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=98.36 E-value=0.0059 Score=64.20 Aligned_cols=78 Identities=14% Similarity=0.167 Sum_probs=50.1
Q ss_pred cCCceeeeec-Ch---Hhhhcc----cccccccc---cCCh-hHHHHHHHhCCceecccccccchhhHHHHHhhhceeee
Q 012587 326 KERGCIAGWV-PQ---EEVLAH----SAVGGFLT---HCGW-NSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLD 393 (460)
Q Consensus 326 ~~n~~~~~~v-p~---~~il~~----~~~~~~I~---HGG~-gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~ 393 (460)
.+++.+.++. +. .+++.. +++ ||. .=|. -++.||+++|+|+|+.-..+ ....+ +.-..|..
T Consensus 618 ~g~V~flG~~~~~~~~~elyr~iAd~adV--fV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG----~~EiV-~dg~tGfL 690 (784)
T TIGR02470 618 HGQIRWIGAQLNRVRNGELYRYIADTKGI--FVQPALYEAFGLTVLEAMTCGLPTFATRFGG----PLEII-QDGVSGFH 690 (784)
T ss_pred CCeEEEccCcCCcccHHHHHHHhhccCcE--EEECCcccCCCHHHHHHHHcCCCEEEcCCCC----HHHHh-cCCCcEEE
Confidence 3577777664 32 234432 234 653 2333 59999999999999875442 44455 34345777
Q ss_pred ecCCcchHHHHHHHHHHH
Q 012587 394 IKDLCDRNIVEKAVNDLM 411 (460)
Q Consensus 394 ~~~~~~~~~l~~~i~~~l 411 (460)
+ ...+.++++++|.+++
T Consensus 691 V-dp~D~eaLA~aL~~ll 707 (784)
T TIGR02470 691 I-DPYHGEEAAEKIVDFF 707 (784)
T ss_pred e-CCCCHHHHHHHHHHHH
Confidence 7 4457888999988876
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=98.35 E-value=0.00016 Score=70.28 Aligned_cols=318 Identities=11% Similarity=0.072 Sum_probs=160.5
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhC-CCeEEEEeCccchhH-----HhhccccccccccCCCCceEEecCCCCCCCCC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHA-GIKITFLNTEHYYDR-----VIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHP 80 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~r-GH~Vt~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (460)
|||+++ .|++-.+.=+.+|.++|.+. +.++.++.+...++. ..... ..++... + ...-...
T Consensus 1 ~ki~~v-~GtRpe~iklapv~~~l~~~~~~~~~lv~tGqH~~~~~g~~~~~~~---------~~~~~~~--~-~~~~~~~ 67 (365)
T TIGR03568 1 KKICVV-TGTRADYGLLRPLLKALQDDPDLELQLIVTGMHLSPEYGNTVNEIE---------KDGFDID--E-KIEILLD 67 (365)
T ss_pred CeEEEE-EecChhHHHHHHHHHHHhcCCCCcEEEEEeCCCCChhhccHHHHHH---------HcCCCCC--C-ccccccC
Confidence 366544 57777888888888889874 788888877554421 11110 0011111 1 0110000
Q ss_pred -CCCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcC--Ccc-hHHHHHHHhCCceEEEecchhHHHHHHhhccccc
Q 012587 81 -RTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDG--YMS-RAIDAAREVGVSIIYFRTISACAFWSFHCIPDII 156 (460)
Q Consensus 81 -~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~--~~~-~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 156 (460)
....+....+.. ....+.+++++. +||+|+.-. +.. ++..+|..+|||++-+.-.-...
T Consensus 68 ~~~~~~~~~~~~~----~~~~~~~~~~~~--~Pd~vlv~GD~~~~la~alaA~~~~IPv~HveaG~rs~----------- 130 (365)
T TIGR03568 68 SDSNAGMAKSMGL----TIIGFSDAFERL--KPDLVVVLGDRFEMLAAAIAAALLNIPIAHIHGGEVTE----------- 130 (365)
T ss_pred CCCCCCHHHHHHH----HHHHHHHHHHHh--CCCEEEEeCCchHHHHHHHHHHHhCCcEEEEECCccCC-----------
Confidence 011222333322 335667788886 999998654 322 68999999999999765431100
Q ss_pred cCCCCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHH-hhcC-CCceeEeCcccc
Q 012587 157 DAGELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQI-RNHS-CPNIYSIGPLNA 234 (460)
Q Consensus 157 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~-~~~~-~~~~~~vG~~~~ 234 (460)
+ ..+...+...... ++..+..+. ...+.. +... ..+++.+|-...
T Consensus 131 --------------~---------~~eE~~r~~i~~l-----a~l~f~~t~-----~~~~~L~~eg~~~~~i~~tG~~~i 177 (365)
T TIGR03568 131 --------------G---------AIDESIRHAITKL-----SHLHFVATE-----EYRQRVIQMGEDPDRVFNVGSPGL 177 (365)
T ss_pred --------------C---------CchHHHHHHHHHH-----HhhccCCCH-----HHHHHHHHcCCCCCcEEEECCcHH
Confidence 0 0001111111111 111111111 111111 1101 134666775432
Q ss_pred ccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcc--c-CCHHHHHHHHHHHhhCCCcEEEEEccCCCCCC
Q 012587 235 HLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIA--V-MSRDQLIEFYYGLVHSKKSFLWVIRPDLISGK 311 (460)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~--~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~ 311 (460)
..-.... ....+++.+.+.-..+++.|+|++=... + ...+.+..+++++...+.++++....+. .
T Consensus 178 D~l~~~~---------~~~~~~~~~~lgl~~~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~~vi~P~~~-p-- 245 (365)
T TIGR03568 178 DNILSLD---------LLSKEELEEKLGIDLDKPYALVTFHPVTLEKESAEEQIKELLKALDELNKNYIFTYPNAD-A-- 245 (365)
T ss_pred HHHHhhh---------ccCHHHHHHHhCCCCCCCEEEEEeCCCcccccCchHHHHHHHHHHHHhccCCEEEEeCCC-C--
Confidence 2111000 0012223333321224578878775432 3 3356788899999887766655543210 0
Q ss_pred CCCCCCchHHHHHh--cCCceeeeecC---hHhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHHHHHh
Q 012587 312 DGENQIPEELLEAT--KERGCIAGWVP---QEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGE 386 (460)
Q Consensus 312 ~~~~~~~~~~~~~~--~~n~~~~~~vp---~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e 386 (460)
+. ..+...+.+.. .+|+.+.+.++ ...++.++++ +|+-++.|- .||.+.|+|.|.+- +.+ .-+ +
T Consensus 246 ~~-~~i~~~i~~~~~~~~~v~l~~~l~~~~~l~Ll~~a~~--vitdSSggi-~EA~~lg~Pvv~l~---~R~---e~~-~ 314 (365)
T TIGR03568 246 GS-RIINEAIEEYVNEHPNFRLFKSLGQERYLSLLKNADA--VIGNSSSGI-IEAPSFGVPTINIG---TRQ---KGR-L 314 (365)
T ss_pred Cc-hHHHHHHHHHhcCCCCEEEECCCChHHHHHHHHhCCE--EEEcChhHH-HhhhhcCCCEEeec---CCc---hhh-h
Confidence 00 01111122211 35788876555 5667889997 998875555 99999999999774 211 112 2
Q ss_pred hhceeeeecCCcchHHHHHHHHHHHh
Q 012587 387 VWKLGLDIKDLCDRNIVEKAVNDLMV 412 (460)
Q Consensus 387 ~~G~g~~~~~~~~~~~l~~~i~~~l~ 412 (460)
.|..+.+ =..+.++|.+++.++++
T Consensus 315 -~g~nvl~-vg~~~~~I~~a~~~~~~ 338 (365)
T TIGR03568 315 -RADSVID-VDPDKEEIVKAIEKLLD 338 (365)
T ss_pred -hcCeEEE-eCCCHHHHHHHHHHHhC
Confidence 2433331 14678999999999654
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=98.30 E-value=0.0033 Score=65.81 Aligned_cols=92 Identities=21% Similarity=0.179 Sum_probs=62.6
Q ss_pred cCCceeeeecCh-Hhhhcccccccccc---cCCh-hHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeec-CCcc
Q 012587 326 KERGCIAGWVPQ-EEVLAHSAVGGFLT---HCGW-NSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIK-DLCD 399 (460)
Q Consensus 326 ~~n~~~~~~vp~-~~il~~~~~~~~I~---HGG~-gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~-~~~~ 399 (460)
.+++.+.+|.++ ..++..+++ +|. +.|. +++.||+++|+|+|+.... .....+ +.-..|..++ .+.+
T Consensus 573 ~~~V~flG~~~dv~~ll~aaDv--~VlpS~~Egfp~vlLEAMA~G~PVVat~~g----G~~EiV-~dg~~GlLv~~~d~~ 645 (694)
T PRK15179 573 GERILFTGLSRRVGYWLTQFNA--FLLLSRFEGLPNVLIEAQFSGVPVVTTLAG----GAGEAV-QEGVTGLTLPADTVT 645 (694)
T ss_pred CCcEEEcCCcchHHHHHHhcCE--EEeccccccchHHHHHHHHcCCeEEEECCC----ChHHHc-cCCCCEEEeCCCCCC
Confidence 467888888875 778888887 553 4554 7999999999999997643 244455 3434687776 4556
Q ss_pred hHHHHHHHHHHHh----HhHHHHHHHHHHHH
Q 012587 400 RNIVEKAVNDLMV----ERKEEFMESADRMA 426 (460)
Q Consensus 400 ~~~l~~~i~~~l~----~~~~~~~~~a~~l~ 426 (460)
.+++.+++.+++. + +.+++++++..
T Consensus 646 ~~~La~aL~~ll~~l~~~--~~l~~~ar~~a 674 (694)
T PRK15179 646 APDVAEALARIHDMCAAD--PGIARKAADWA 674 (694)
T ss_pred hHHHHHHHHHHHhChhcc--HHHHHHHHHHH
Confidence 6666666666554 4 66666665443
|
|
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=98.30 E-value=0.00031 Score=73.57 Aligned_cols=87 Identities=11% Similarity=0.178 Sum_probs=51.8
Q ss_pred CCceeee----ecChHhhhc----ccccccccc---cCChh-HHHHHHHhCCceecccccccchhhHHHHHhhhceeeee
Q 012587 327 ERGCIAG----WVPQEEVLA----HSAVGGFLT---HCGWN-STLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDI 394 (460)
Q Consensus 327 ~n~~~~~----~vp~~~il~----~~~~~~~I~---HGG~g-s~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~ 394 (460)
+++.+.+ ..+..++.. .+++ ||. +-|.| ++.||+++|+|+|+....+ ....+ +.-..|..+
T Consensus 642 ~~V~flG~~~~~~~~~eLyr~iadaaDV--fVlPS~~EgFGLvvLEAMA~GlPVVATdvGG----~~EIV-~dG~tG~LV 714 (815)
T PLN00142 642 GQFRWIAAQTNRVRNGELYRYIADTKGA--FVQPALYEAFGLTVVEAMTCGLPTFATCQGG----PAEII-VDGVSGFHI 714 (815)
T ss_pred CcEEEcCCcCCcccHHHHHHHHHhhCCE--EEeCCcccCCCHHHHHHHHcCCCEEEcCCCC----HHHHh-cCCCcEEEe
Confidence 4555543 333344543 2344 554 34554 8999999999999875433 44455 343457777
Q ss_pred cCCcchHHHHHHHHHHH----hHhHHHHHHHHH
Q 012587 395 KDLCDRNIVEKAVNDLM----VERKEEFMESAD 423 (460)
Q Consensus 395 ~~~~~~~~l~~~i~~~l----~~~~~~~~~~a~ 423 (460)
...+.+++.++|.+++ +| +..+++..
T Consensus 715 -~P~D~eaLA~aI~~lLekLl~D--p~lr~~mg 744 (815)
T PLN00142 715 -DPYHGDEAANKIADFFEKCKED--PSYWNKIS 744 (815)
T ss_pred -CCCCHHHHHHHHHHHHHHhcCC--HHHHHHHH
Confidence 4457778877776654 55 55554433
|
|
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=98.29 E-value=0.00014 Score=71.82 Aligned_cols=84 Identities=23% Similarity=0.254 Sum_probs=60.6
Q ss_pred cCCceeeeecCh-Hhhhccccccccc--cc--CCh-hHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecCCcc
Q 012587 326 KERGCIAGWVPQ-EEVLAHSAVGGFL--TH--CGW-NSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCD 399 (460)
Q Consensus 326 ~~n~~~~~~vp~-~~il~~~~~~~~I--~H--GG~-gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~ 399 (460)
.+++.+.+++++ ..++..+++ +| ++ .|. +.+.||+++|+|+|+.+...+. +.+..|.|..+. .+
T Consensus 279 ~~~V~~~G~v~~~~~~~~~adv--~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~~------i~~~~~~g~lv~--~~ 348 (397)
T TIGR03087 279 LPGVTVTGSVADVRPYLAHAAV--AVAPLRIARGIQNKVLEAMAMAKPVVASPEAAEG------IDALPGAELLVA--AD 348 (397)
T ss_pred CCCeEEeeecCCHHHHHHhCCE--EEecccccCCcccHHHHHHHcCCCEEecCccccc------ccccCCcceEeC--CC
Confidence 467888899985 677888888 54 32 455 4699999999999998754322 111236676663 58
Q ss_pred hHHHHHHHHHHHhHhHHHHHHH
Q 012587 400 RNIVEKAVNDLMVERKEEFMES 421 (460)
Q Consensus 400 ~~~l~~~i~~~l~~~~~~~~~~ 421 (460)
.+++.++|.++++| +..+++
T Consensus 349 ~~~la~ai~~ll~~--~~~~~~ 368 (397)
T TIGR03087 349 PADFAAAILALLAN--PAEREE 368 (397)
T ss_pred HHHHHHHHHHHHcC--HHHHHH
Confidence 99999999999997 654433
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=98.29 E-value=0.0015 Score=63.87 Aligned_cols=84 Identities=15% Similarity=0.116 Sum_probs=55.1
Q ss_pred cCCceeeeec--Ch---HhhhcccccccccccC---C-hhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecC
Q 012587 326 KERGCIAGWV--PQ---EEVLAHSAVGGFLTHC---G-WNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKD 396 (460)
Q Consensus 326 ~~n~~~~~~v--p~---~~il~~~~~~~~I~HG---G-~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~ 396 (460)
.+++.+.++. ++ ..+++.+++ ++.-. | ..++.||+++|+|+|+....+ ....+ +.-..|...+
T Consensus 251 ~~~v~~~~~~~~~~~~~~~~~~~ad~--~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~----~~~~i-~~~~~g~~~~- 322 (372)
T cd03792 251 DPDIHVLTLPPVSDLEVNALQRASTV--VLQKSIREGFGLTVTEALWKGKPVIAGPVGG----IPLQI-EDGETGFLVD- 322 (372)
T ss_pred CCCeEEEecCCCCHHHHHHHHHhCeE--EEeCCCccCCCHHHHHHHHcCCCEEEcCCCC----chhhc-ccCCceEEeC-
Confidence 3567777776 43 356788887 66432 2 349999999999999876432 23344 3434566553
Q ss_pred CcchHHHHHHHHHHHhHhHHHHHHH
Q 012587 397 LCDRNIVEKAVNDLMVERKEEFMES 421 (460)
Q Consensus 397 ~~~~~~l~~~i~~~l~~~~~~~~~~ 421 (460)
+.+.+..++.+++++ ++.++.
T Consensus 323 --~~~~~a~~i~~ll~~--~~~~~~ 343 (372)
T cd03792 323 --TVEEAAVRILYLLRD--PELRRK 343 (372)
T ss_pred --CcHHHHHHHHHHHcC--HHHHHH
Confidence 456778899999986 555443
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=98.27 E-value=8.7e-06 Score=78.27 Aligned_cols=255 Identities=12% Similarity=0.112 Sum_probs=127.6
Q ss_pred CcHHHHHHHHcCCCCccEEEE--cCCcc-hHHHHHHHhCCceEEEecchhHHHHHHhhccccccCCCCCCCCCccCCCCC
Q 012587 97 TPPLLKEMVSDSKSPVNCIIT--DGYMS-RAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELPIKGFLRCRDLP 173 (460)
Q Consensus 97 ~~~~l~~~~~~~~~~pD~vv~--D~~~~-~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 173 (460)
....+.+++... +||+|+. |.+.. ++..+|..++||++-+.-..- . .+. .
T Consensus 55 ~~~~~~~~~~~~--~Pd~Vlv~GD~~~~la~alaA~~~~ipv~HieaGlR-s-------~d~-----------------~ 107 (346)
T PF02350_consen 55 AIIELADVLERE--KPDAVLVLGDRNEALAAALAAFYLNIPVAHIEAGLR-S-------GDR-----------------T 107 (346)
T ss_dssp HHHHHHHHHHHH--T-SEEEEETTSHHHHHHHHHHHHTT-EEEEES-------------S-T-----------------T
T ss_pred HHHHHHHHHHhc--CCCEEEEEcCCchHHHHHHHHHHhCCCEEEecCCCC-c-------ccc-----------------C
Confidence 346677888886 9999874 54433 679999999999776544311 0 000 0
Q ss_pred CcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhh-c-CCCceeEeCccccccccCCCccccCCCCcc
Q 012587 174 SFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRN-H-SCPNIYSIGPLNAHLKVRIPEKTYSSSSLW 251 (460)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~-~-~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~ 251 (460)
. ...+...+... . .-+...+..+-.. ...+.. . ...+++.+|......-....+
T Consensus 108 ~-----g~~de~~R~~i---~--~la~lhf~~t~~~-----~~~L~~~G~~~~rI~~vG~~~~D~l~~~~~--------- 163 (346)
T PF02350_consen 108 E-----GMPDEINRHAI---D--KLAHLHFAPTEEA-----RERLLQEGEPPERIFVVGNPGIDALLQNKE--------- 163 (346)
T ss_dssp S-----STTHHHHHHHH---H--HH-SEEEESSHHH-----HHHHHHTT--GGGEEE---HHHHHHHHHHH---------
T ss_pred C-----CCchhhhhhhh---h--hhhhhhccCCHHH-----HHHHHhcCCCCCeEEEEChHHHHHHHHhHH---------
Confidence 0 00111222222 2 3345555555332 111122 0 124689999654332110000
Q ss_pred ccchhh--hhhhhcCCCCcEEEEEecCcccCC-H---HHHHHHHHHHhhC-CCcEEEEEccCCCCCCCCCCCCchHHHHH
Q 012587 252 KIDRSC--MAWLDKQPKQSVIYVSFGSIAVMS-R---DQLIEFYYGLVHS-KKSFLWVIRPDLISGKDGENQIPEELLEA 324 (460)
Q Consensus 252 ~~~~~l--~~~l~~~~~~~~V~vs~GS~~~~~-~---~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 324 (460)
...+++ .+++. ..+++.|+|++=...+.. + ..+..+++++.+. ++++||.+... +.....+.+.
T Consensus 164 ~~~~~~~~~~i~~-~~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~--------p~~~~~i~~~ 234 (346)
T PF02350_consen 164 EIEEKYKNSGILQ-DAPKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHNN--------PRGSDIIIEK 234 (346)
T ss_dssp TTCC-HHHHHHHH-CTTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S---------HHHHHHHHHH
T ss_pred HHhhhhhhHHHHh-ccCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCC--------chHHHHHHHH
Confidence 001111 12222 357899999985555544 3 3455556666655 67888887421 0111222222
Q ss_pred hc--CCceeeeecC---hHhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecCCcc
Q 012587 325 TK--ERGCIAGWVP---QEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCD 399 (460)
Q Consensus 325 ~~--~n~~~~~~vp---~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~ 399 (460)
.. +|+.++..++ +..+|.++++ +|+..| |-.-||.++|+|.|.+ .|+-..=.-+ + .|..+.+ + .+
T Consensus 235 l~~~~~v~~~~~l~~~~~l~ll~~a~~--vvgdSs-GI~eEa~~lg~P~v~i---R~~geRqe~r-~-~~~nvlv-~-~~ 304 (346)
T PF02350_consen 235 LKKYDNVRLIEPLGYEEYLSLLKNADL--VVGDSS-GIQEEAPSLGKPVVNI---RDSGERQEGR-E-RGSNVLV-G-TD 304 (346)
T ss_dssp HTT-TTEEEE----HHHHHHHHHHESE--EEESSH-HHHHHGGGGT--EEEC---SSS-S-HHHH-H-TTSEEEE-T-SS
T ss_pred hcccCCEEEECCCCHHHHHHHHhcceE--EEEcCc-cHHHHHHHhCCeEEEe---cCCCCCHHHH-h-hcceEEe-C-CC
Confidence 21 4888886665 5777889997 999999 4444999999999999 2222222222 2 3555554 3 78
Q ss_pred hHHHHHHHHHHHhHhHHHHHHHHH
Q 012587 400 RNIVEKAVNDLMVERKEEFMESAD 423 (460)
Q Consensus 400 ~~~l~~~i~~~l~~~~~~~~~~a~ 423 (460)
.++|.+++.+++++ ....++.+
T Consensus 305 ~~~I~~ai~~~l~~--~~~~~~~~ 326 (346)
T PF02350_consen 305 PEAIIQAIEKALSD--KDFYRKLK 326 (346)
T ss_dssp HHHHHHHHHHHHH---HHHHHHHH
T ss_pred HHHHHHHHHHHHhC--hHHHHhhc
Confidence 99999999999985 44444443
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=98.24 E-value=0.0018 Score=65.63 Aligned_cols=133 Identities=11% Similarity=0.035 Sum_probs=75.0
Q ss_pred cEEEEEecCccc-CCHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHH---HHhcCCceeeeecChH---hh
Q 012587 268 SVIYVSFGSIAV-MSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELL---EATKERGCIAGWVPQE---EV 340 (460)
Q Consensus 268 ~~V~vs~GS~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~n~~~~~~vp~~---~i 340 (460)
..+++..|.+.. ...+.+...+..+.+.+.++++.-. |.+ ...+.+. ++.+.++.+....+.. .+
T Consensus 291 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~-------g~~-~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~ 362 (473)
T TIGR02095 291 VPLFGVISRLTQQKGVDLLLAALPELLELGGQLVVLGT-------GDP-ELEEALRELAERYPGNVRVIIGYDEALAHLI 362 (473)
T ss_pred CCEEEEEecCccccChHHHHHHHHHHHHcCcEEEEECC-------CCH-HHHHHHHHHHHHCCCcEEEEEcCCHHHHHHH
Confidence 445566777763 2334444444444334566655432 110 1112222 2334566666555543 57
Q ss_pred hcccccccccc---cCChh-HHHHHHHhCCceecccccc--cchhhHHHHHhhhceeeeecCCcchHHHHHHHHHHHh
Q 012587 341 LAHSAVGGFLT---HCGWN-STLESIVAGMPMICWPSFA--DQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMV 412 (460)
Q Consensus 341 l~~~~~~~~I~---HGG~g-s~~eal~~GvP~l~~P~~~--DQ~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~ 412 (460)
++.+++ +|. +-|.| +.+||+++|+|.|+....+ |.-.+...-. .-+.|..+ ...++++|.++|.++++
T Consensus 363 ~~~aDv--~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~-~~~~G~l~-~~~d~~~la~~i~~~l~ 436 (473)
T TIGR02095 363 YAGADF--ILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEA-ESGTGFLF-EEYDPGALLAALSRALR 436 (473)
T ss_pred HHhCCE--EEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCC-CCCceEEe-CCCCHHHHHHHHHHHHH
Confidence 888887 553 23444 7899999999999876532 3221111000 12678777 55688999999999987
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=98.15 E-value=0.011 Score=63.95 Aligned_cols=117 Identities=14% Similarity=0.110 Sum_probs=66.2
Q ss_pred cCCceeeeecChH---hhhccccccccccc---CCh-hHHHHHHHhCCceecccccc--cchhhH----HHHH--hhhce
Q 012587 326 KERGCIAGWVPQE---EVLAHSAVGGFLTH---CGW-NSTLESIVAGMPMICWPSFA--DQQINS----RFVG--EVWKL 390 (460)
Q Consensus 326 ~~n~~~~~~vp~~---~il~~~~~~~~I~H---GG~-gs~~eal~~GvP~l~~P~~~--DQ~~na----~~~~--e~~G~ 390 (460)
++++.+....+.. .+++.+++ |+.- =|+ -+.+||+++|+|.|+....+ |.-... .+.. ..-+.
T Consensus 899 ~~rV~f~g~~de~lah~iyaaADi--flmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~t 976 (1036)
T PLN02316 899 HDRARLCLTYDEPLSHLIYAGADF--ILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPN 976 (1036)
T ss_pred CCeEEEEecCCHHHHHHHHHhCcE--EEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCc
Confidence 3466665444542 58888887 6642 233 58999999999988865532 322211 0100 01246
Q ss_pred eeeecCCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Q 012587 391 GLDIKDLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDI 450 (460)
Q Consensus 391 g~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l 450 (460)
|..+ ...+++.|..+|.++|++ |.+..+.+++..++.+... -+++...+-...|
T Consensus 977 Gflf-~~~d~~aLa~AL~raL~~----~~~~~~~~~~~~r~~m~~d-FSW~~~A~~Y~~L 1030 (1036)
T PLN02316 977 GFSF-DGADAAGVDYALNRAISA----WYDGRDWFNSLCKRVMEQD-WSWNRPALDYMEL 1030 (1036)
T ss_pred eEEe-CCCCHHHHHHHHHHHHhh----hhhhHHHHHHHHHHHHHhh-CCHHHHHHHHHHH
Confidence 7777 567899999999999974 3333334444444433223 3344433333333
|
|
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.11 E-value=0.0024 Score=64.80 Aligned_cols=135 Identities=13% Similarity=0.046 Sum_probs=75.4
Q ss_pred CcEEEEEecCcccC-CHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHH---HHhcCCceeeeecCh---Hh
Q 012587 267 QSVIYVSFGSIAVM-SRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELL---EATKERGCIAGWVPQ---EE 339 (460)
Q Consensus 267 ~~~V~vs~GS~~~~-~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~n~~~~~~vp~---~~ 339 (460)
+..+++..|.+... ..+.+...+..+.+.+.++++.-. |. ......+. ++.++|+.+....++ ..
T Consensus 295 ~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~-------g~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 366 (476)
T cd03791 295 DAPLFGFVGRLTEQKGIDLLLEALPELLELGGQLVILGS-------GD-PEYEEALRELAARYPGRVAVLIGYDEALAHL 366 (476)
T ss_pred CCCEEEEEeeccccccHHHHHHHHHHHHHcCcEEEEEec-------CC-HHHHHHHHHHHHhCCCcEEEEEeCCHHHHHH
Confidence 34456777777632 234444444444444566655532 11 01112222 122467776533343 34
Q ss_pred hhccccccccccc---CCh-hHHHHHHHhCCceecccccc--cchhhHHHHHhhhceeeeecCCcchHHHHHHHHHHHhH
Q 012587 340 VLAHSAVGGFLTH---CGW-NSTLESIVAGMPMICWPSFA--DQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVE 413 (460)
Q Consensus 340 il~~~~~~~~I~H---GG~-gs~~eal~~GvP~l~~P~~~--DQ~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~~ 413 (460)
+++.+++ ++.- -|. -+.+||+++|+|.|+....+ |--.+.... .+-|.|..+ ...+.++|.+++.++++.
T Consensus 367 ~~~~aDv--~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~-~~~~~G~~~-~~~~~~~l~~~i~~~l~~ 442 (476)
T cd03791 367 IYAGADF--FLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNED-TGEGTGFVF-EGYNADALLAALRRALAL 442 (476)
T ss_pred HHHhCCE--EECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCC-CCCCCeEEe-CCCCHHHHHHHHHHHHHH
Confidence 6788887 5532 233 47899999999999876532 322222111 123578888 456789999999999863
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.10 E-value=0.0019 Score=61.09 Aligned_cols=348 Identities=15% Similarity=0.138 Sum_probs=171.0
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCCCCC
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPDK 85 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (460)
|+||++++.=..||+.-. .|.++|++|=-+|.|++-.. ++..+.+- .++ ++.... ...+
T Consensus 1 ~~ki~i~AGE~SGDllGa-~LikaLk~~~~~~efvGvgG--~~m~aeG~--------------~sl---~~~~el-svmG 59 (381)
T COG0763 1 MLKIALSAGEASGDLLGA-GLIKALKARYPDVEFVGVGG--EKMEAEGL--------------ESL---FDMEEL-SVMG 59 (381)
T ss_pred CceEEEEecccchhhHHH-HHHHHHHhhCCCeEEEEecc--HHHHhccC--------------ccc---cCHHHH-HHhh
Confidence 579999999999998754 57788888722777776422 22222210 000 011000 1223
Q ss_pred hHHHHHHHHhhCcHHHHHHHHcC-CCCccEEE-EcCCcc--hHHHHHHHhC--CceEEEecchhHHHHHHhhccccccCC
Q 012587 86 FPELVDSLNCATPPLLKEMVSDS-KSPVNCII-TDGYMS--RAIDAAREVG--VSIIYFRTISACAFWSFHCIPDIIDAG 159 (460)
Q Consensus 86 ~~~~~~~~~~~~~~~l~~~~~~~-~~~pD~vv-~D~~~~--~~~~~A~~lg--iP~v~~~~~~~~~~~~~~~~~~~~~~~ 159 (460)
+.+.+..+.. .....+++++.+ ..+||++| .|.-.+ ....-.++.| ||.|.+..- ++|..
T Consensus 60 f~EVL~~lp~-llk~~~~~~~~i~~~kpD~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~P---------sVWAW---- 125 (381)
T COG0763 60 FVEVLGRLPR-LLKIRRELVRYILANKPDVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVSP---------SVWAW---- 125 (381)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHhcCCCEEEEeCCCCCchHHHHHHHHhCCCCCeEEEECc---------ceeee----
Confidence 3333333332 112223333322 23999987 665433 3444455667 898875442 22221
Q ss_pred CCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCCCceeEeCccccccccC
Q 012587 160 ELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPNIYSIGPLNAHLKVR 239 (460)
Q Consensus 160 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~~~~~~vG~~~~~~~~~ 239 (460)
......... ...+.++.--. +|++.. .. ..-+..|||--....-.-
T Consensus 126 ----------------------r~~Ra~~i~------~~~D~lLailP--FE~~~y---~k-~g~~~~yVGHpl~d~i~~ 171 (381)
T COG0763 126 ----------------------RPKRAVKIA------KYVDHLLAILP--FEPAFY---DK-FGLPCTYVGHPLADEIPL 171 (381)
T ss_pred ----------------------chhhHHHHH------HHhhHeeeecC--CCHHHH---Hh-cCCCeEEeCChhhhhccc
Confidence 000111111 22222222221 233333 33 333489999544322211
Q ss_pred CCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhC-----CCcEEEEEccCCCCCCCCC
Q 012587 240 IPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHS-----KKSFLWVIRPDLISGKDGE 314 (460)
Q Consensus 240 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~ 314 (460)
. ...+...+-+....+++++.+-.||-...=...+..+.++...+ +.++++-+.....
T Consensus 172 ~-----------~~r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~~vlp~~~~~~------ 234 (381)
T COG0763 172 L-----------PDREAAREKLGIDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLKFVLPLVNAKY------ 234 (381)
T ss_pred c-----------ccHHHHHHHhCCCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCceEEEecCcHHH------
Confidence 1 12222333343345789999999997643333344444444433 4566666532100
Q ss_pred CCCchHHHHHhcCCc-eeeeecC---hHhhhcccccccccccCChhHHHHHHHhCCceecccccc-cchhhHHHHHhhhc
Q 012587 315 NQIPEELLEATKERG-CIAGWVP---QEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFA-DQQINSRFVGEVWK 389 (460)
Q Consensus 315 ~~~~~~~~~~~~~n~-~~~~~vp---~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~-DQ~~na~~~~e~~G 389 (460)
+.+.. +....+. ...-++. -...+..|++ ++++. | .-+.|+..+|+|||+.=-.. =-..-++++. +..
T Consensus 235 ~~~~~---~~~~~~~~~~~~~~~~~~~~~a~~~aD~-al~aS-G-T~tLE~aL~g~P~Vv~Yk~~~it~~iak~lv-k~~ 307 (381)
T COG0763 235 RRIIE---EALKWEVAGLSLILIDGEKRKAFAAADA-ALAAS-G-TATLEAALAGTPMVVAYKVKPITYFIAKRLV-KLP 307 (381)
T ss_pred HHHHH---HHhhccccCceEEecCchHHHHHHHhhH-HHHhc-c-HHHHHHHHhCCCEEEEEeccHHHHHHHHHhc-cCC
Confidence 00111 1111111 1222222 2446777776 34444 4 34789999999999862110 0111223322 111
Q ss_pred ------------eeeee-cCCcchHHHHHHHHHHHhHh--HHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Q 012587 390 ------------LGLDI-KDLCDRNIVEKAVNDLMVER--KEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDI 450 (460)
Q Consensus 390 ------------~g~~~-~~~~~~~~l~~~i~~~l~~~--~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l 450 (460)
+...+ +++++++.|.+++..++.|. ...+++...++.+.++. ++.+..+++.+++.+
T Consensus 308 yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~~~~l~~~l~~----~~~~e~aA~~vl~~~ 379 (381)
T COG0763 308 YVSLPNILAGREIVPELIQEDCTPENLARALEELLLNGDRREALKEKFRELHQYLRE----DPASEIAAQAVLELL 379 (381)
T ss_pred cccchHHhcCCccchHHHhhhcCHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHcC----CcHHHHHHHHHHHHh
Confidence 11111 14799999999999999971 12456666666666665 556677777777665
|
|
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=98.04 E-value=0.017 Score=57.97 Aligned_cols=79 Identities=15% Similarity=0.071 Sum_probs=52.1
Q ss_pred cCCceeeeecChHh---hhcccccccccc---cCChh-HHHHHHHhCCceecccccccchhhHHHHHh-hhc-eeeeecC
Q 012587 326 KERGCIAGWVPQEE---VLAHSAVGGFLT---HCGWN-STLESIVAGMPMICWPSFADQQINSRFVGE-VWK-LGLDIKD 396 (460)
Q Consensus 326 ~~n~~~~~~vp~~~---il~~~~~~~~I~---HGG~g-s~~eal~~GvP~l~~P~~~DQ~~na~~~~e-~~G-~g~~~~~ 396 (460)
.+++.+.+++|+.+ +|..+++ +|+ +-|.| ++.||+++|+|.|+....+--. ..+.+ ..| .|...
T Consensus 334 ~~~V~f~g~v~~~el~~ll~~a~~--~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~---eIV~~~~~g~tG~l~-- 406 (463)
T PLN02949 334 DGDVEFHKNVSYRDLVRLLGGAVA--GLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKM---DIVLDEDGQQTGFLA-- 406 (463)
T ss_pred CCcEEEeCCCCHHHHHHHHHhCcE--EEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcc---eeeecCCCCcccccC--
Confidence 56888889998654 5777886 553 23444 7999999999999987543100 01101 002 34333
Q ss_pred CcchHHHHHHHHHHHh
Q 012587 397 LCDRNIVEKAVNDLMV 412 (460)
Q Consensus 397 ~~~~~~l~~~i~~~l~ 412 (460)
-+.+++++++.++++
T Consensus 407 -~~~~~la~ai~~ll~ 421 (463)
T PLN02949 407 -TTVEEYADAILEVLR 421 (463)
T ss_pred -CCHHHHHHHHHHHHh
Confidence 288999999999997
|
|
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.037 Score=55.05 Aligned_cols=79 Identities=15% Similarity=0.097 Sum_probs=54.0
Q ss_pred cCCceeeeecChH---hhhccccccccccc---CCh-hHHHHHHHhCCceecccccccchhhHHHHHh---hhceeeeec
Q 012587 326 KERGCIAGWVPQE---EVLAHSAVGGFLTH---CGW-NSTLESIVAGMPMICWPSFADQQINSRFVGE---VWKLGLDIK 395 (460)
Q Consensus 326 ~~n~~~~~~vp~~---~il~~~~~~~~I~H---GG~-gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e---~~G~g~~~~ 395 (460)
.+++.+.+++|+. .+|..+++ +|+- -|. -++.||+++|+|.|+.-..+.- ...+ + .-..|...
T Consensus 304 ~~~V~f~g~v~~~~l~~~l~~adv--~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~---~~iv-~~~~~g~~G~l~- 376 (419)
T cd03806 304 EDKVEFVVNAPFEELLEELSTASI--GLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPL---LDIV-VPWDGGPTGFLA- 376 (419)
T ss_pred CCeEEEecCCCHHHHHHHHHhCeE--EEECCccCCcccHHHHHHHcCCcEEEEcCCCCc---hhee-eccCCCCceEEe-
Confidence 4688888999864 56778887 5532 222 4889999999999986533211 1112 2 23467665
Q ss_pred CCcchHHHHHHHHHHHhH
Q 012587 396 DLCDRNIVEKAVNDLMVE 413 (460)
Q Consensus 396 ~~~~~~~l~~~i~~~l~~ 413 (460)
. +++++.+++.+++++
T Consensus 377 ~--d~~~la~ai~~ll~~ 392 (419)
T cd03806 377 S--TAEEYAEAIEKILSL 392 (419)
T ss_pred C--CHHHHHHHHHHHHhC
Confidence 2 899999999999984
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.031 Score=54.64 Aligned_cols=78 Identities=21% Similarity=0.113 Sum_probs=51.8
Q ss_pred cCCceeeeecChHh---hhccccccccc------ccCCh-hHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeec
Q 012587 326 KERGCIAGWVPQEE---VLAHSAVGGFL------THCGW-NSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIK 395 (460)
Q Consensus 326 ~~n~~~~~~vp~~~---il~~~~~~~~I------~HGG~-gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~ 395 (460)
.+|+.+.+++|+.+ .+.++++.++- +.++. ..+.|++++|+|+|..+. ...+ +..+.+...
T Consensus 253 ~~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~-------~~~~-~~~~~~~~~- 323 (373)
T cd04950 253 LPNVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPL-------PEVR-RYEDEVVLI- 323 (373)
T ss_pred CCCEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCc-------HHHH-hhcCcEEEe-
Confidence 37999999999654 57788873321 22333 458999999999998752 2222 222323333
Q ss_pred CCcchHHHHHHHHHHHhH
Q 012587 396 DLCDRNIVEKAVNDLMVE 413 (460)
Q Consensus 396 ~~~~~~~l~~~i~~~l~~ 413 (460)
. -+.+++.++|.+++.+
T Consensus 324 ~-~d~~~~~~ai~~~l~~ 340 (373)
T cd04950 324 A-DDPEEFVAAIEKALLE 340 (373)
T ss_pred C-CCHHHHHHHHHHHHhc
Confidence 2 3899999999998763
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >COG5017 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.00023 Score=56.18 Aligned_cols=107 Identities=13% Similarity=0.110 Sum_probs=67.0
Q ss_pred EEEEecCcccCCHHHHHH--HHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeec--C-hHhhhccc
Q 012587 270 IYVSFGSIAVMSRDQLIE--FYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWV--P-QEEVLAHS 344 (460)
Q Consensus 270 V~vs~GS~~~~~~~~~~~--~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~v--p-~~~il~~~ 344 (460)
||||-||....=...+.. +..-.+....++|+..+.+ +..|- . ..++.+|. + ...+...+
T Consensus 2 ifVTvGstf~~f~rlv~k~e~~el~~~i~e~lIvQyGn~--------d~kpv------a-gl~v~~F~~~~kiQsli~da 66 (161)
T COG5017 2 IFVTVGSTFYPFNRLVLKIEVLELTELIQEELIVQYGNG--------DIKPV------A-GLRVYGFDKEEKIQSLIHDA 66 (161)
T ss_pred eEEEecCccchHHHHHhhHHHHHHHHHhhhheeeeecCC--------Ccccc------c-ccEEEeechHHHHHHHhhcc
Confidence 789999884221122222 2222223345788888532 12231 1 13455443 4 45666666
Q ss_pred ccccccccCChhHHHHHHHhCCceecccccc--------cchhhHHHHHhhhceeeee
Q 012587 345 AVGGFLTHCGWNSTLESIVAGMPMICWPSFA--------DQQINSRFVGEVWKLGLDI 394 (460)
Q Consensus 345 ~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~--------DQ~~na~~~~e~~G~g~~~ 394 (460)
++ +|+|+|.||+..++..++|.+++|-.. .|-.-|..++ +.+.=...
T Consensus 67 rI--VISHaG~GSIL~~~rl~kplIv~pr~s~y~elvDdHQvela~kla-e~~~vv~~ 121 (161)
T COG5017 67 RI--VISHAGEGSILLLLRLDKPLIVVPRSSQYQELVDDHQVELALKLA-EINYVVAC 121 (161)
T ss_pred eE--EEeccCcchHHHHhhcCCcEEEEECchhHHHhhhhHHHHHHHHHH-hcCceEEE
Confidence 66 999999999999999999999999754 4777777775 45554444
|
|
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.021 Score=57.79 Aligned_cols=87 Identities=17% Similarity=0.212 Sum_probs=61.5
Q ss_pred cCCceeeeecChHhhhccccccccccc----CChhHHHHHHHhCCceecccccccchhhHHHHHhhh-----c-eeeeec
Q 012587 326 KERGCIAGWVPQEEVLAHSAVGGFLTH----CGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVW-----K-LGLDIK 395 (460)
Q Consensus 326 ~~n~~~~~~vp~~~il~~~~~~~~I~H----GG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~-----G-~g~~~~ 395 (460)
.+|+.+.+...-..+++.+++ +|.- |--.++.||+++|+|+|+... ......+ +.. | .|..+
T Consensus 353 ~~~V~f~G~~~v~~~l~~aDv--~vlpS~~Eg~p~~vlEAma~G~PVVatd~----g~~~elv-~~~~~~~~g~~G~lv- 424 (475)
T cd03813 353 EDNVKFTGFQNVKEYLPKLDV--LVLTSISEGQPLVILEAMAAGIPVVATDV----GSCRELI-EGADDEALGPAGEVV- 424 (475)
T ss_pred CCeEEEcCCccHHHHHHhCCE--EEeCchhhcCChHHHHHHHcCCCEEECCC----CChHHHh-cCCcccccCCceEEE-
Confidence 468888886666888888887 4432 334689999999999998543 3333444 331 2 56666
Q ss_pred CCcchHHHHHHHHHHHhHhHHHHHHHH
Q 012587 396 DLCDRNIVEKAVNDLMVERKEEFMESA 422 (460)
Q Consensus 396 ~~~~~~~l~~~i~~~l~~~~~~~~~~a 422 (460)
...+.+++.+++.++++| +..+++.
T Consensus 425 ~~~d~~~la~ai~~ll~~--~~~~~~~ 449 (475)
T cd03813 425 PPADPEALARAILRLLKD--PELRRAM 449 (475)
T ss_pred CCCCHHHHHHHHHHHhcC--HHHHHHH
Confidence 556899999999999997 6554443
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.0025 Score=62.48 Aligned_cols=86 Identities=15% Similarity=0.213 Sum_probs=61.3
Q ss_pred hcCCceeeeecChH---hhhccccccccccc----CCh-hHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecC
Q 012587 325 TKERGCIAGWVPQE---EVLAHSAVGGFLTH----CGW-NSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKD 396 (460)
Q Consensus 325 ~~~n~~~~~~vp~~---~il~~~~~~~~I~H----GG~-gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~ 396 (460)
...++.+.+++|+. .+++.+++ +|.- .|. .++.||+++|+|+|+.... .+...+ +.-..|..+..
T Consensus 255 l~~~v~~~G~~~~~~l~~~~~~aDv--~v~pS~~~E~f~~~~lEAma~G~PVI~s~~g----g~~Eiv-~~~~~G~~l~~ 327 (380)
T PRK15484 255 IGDRCIMLGGQPPEKMHNYYPLADL--VVVPSQVEEAFCMVAVEAMAAGKPVLASTKG----GITEFV-LEGITGYHLAE 327 (380)
T ss_pred cCCcEEEeCCCCHHHHHHHHHhCCE--EEeCCCCccccccHHHHHHHcCCCEEEeCCC----CcHhhc-ccCCceEEEeC
Confidence 45678888999864 45888888 5532 443 5788999999999997653 234445 34346765545
Q ss_pred CcchHHHHHHHHHHHhHhHHHHH
Q 012587 397 LCDRNIVEKAVNDLMVERKEEFM 419 (460)
Q Consensus 397 ~~~~~~l~~~i~~~l~~~~~~~~ 419 (460)
..+.+++.++|.++++| +..+
T Consensus 328 ~~d~~~la~~I~~ll~d--~~~~ 348 (380)
T PRK15484 328 PMTSDSIISDINRTLAD--PELT 348 (380)
T ss_pred CCCHHHHHHHHHHHHcC--HHHH
Confidence 56899999999999997 6543
|
|
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00026 Score=68.62 Aligned_cols=135 Identities=14% Similarity=0.085 Sum_probs=86.7
Q ss_pred EEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChH---hhhccccc
Q 012587 270 IYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQE---EVLAHSAV 346 (460)
Q Consensus 270 V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~---~il~~~~~ 346 (460)
.++..|++.. ......++++++.++.+++++-.+ ...+.+.+...+|+.+.+++|+. .++..+++
T Consensus 197 ~il~~G~~~~--~K~~~~li~a~~~~~~~l~ivG~g----------~~~~~l~~~~~~~V~~~g~~~~~~~~~~~~~ad~ 264 (351)
T cd03804 197 YYLSVGRLVP--YKRIDLAIEAFNKLGKRLVVIGDG----------PELDRLRAKAGPNVTFLGRVSDEELRDLYARARA 264 (351)
T ss_pred EEEEEEcCcc--ccChHHHHHHHHHCCCcEEEEECC----------hhHHHHHhhcCCCEEEecCCCHHHHHHHHHhCCE
Confidence 3456677652 233566777778777776665421 11123333456899999999974 56788887
Q ss_pred ccccccCCh-hHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecCCcchHHHHHHHHHHHhHhHH-HHHHHHHH
Q 012587 347 GGFLTHCGW-NSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVERKE-EFMESADR 424 (460)
Q Consensus 347 ~~~I~HGG~-gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~~~~~-~~~~~a~~ 424 (460)
-++-+.-|. -++.||+++|+|+|+....+ ....+ +..+.|..+ ..-+.+.+.++|.++++| + ..++++++
T Consensus 265 ~v~ps~e~~g~~~~Eama~G~Pvi~~~~~~----~~e~i-~~~~~G~~~-~~~~~~~la~~i~~l~~~--~~~~~~~~~~ 336 (351)
T cd03804 265 FLFPAEEDFGIVPVEAMASGTPVIAYGKGG----ALETV-IDGVTGILF-EEQTVESLAAAVERFEKN--EDFDPQAIRA 336 (351)
T ss_pred EEECCcCCCCchHHHHHHcCCCEEEeCCCC----Cccee-eCCCCEEEe-CCCCHHHHHHHHHHHHhC--cccCHHHHHH
Confidence 333234444 46789999999999986433 33345 344577777 445788899999999987 5 34444433
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.003 Score=62.22 Aligned_cols=136 Identities=21% Similarity=0.274 Sum_probs=73.8
Q ss_pred CCCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHHHH------hcCCceeeeecChH
Q 012587 265 PKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEA------TKERGCIAGWVPQE 338 (460)
Q Consensus 265 ~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~------~~~n~~~~~~vp~~ 338 (460)
++..++|.+|.+..+.+++.+....+.++..+...+|....+. .-...+.++ .++++.+.++.|+.
T Consensus 282 p~d~vvF~~fn~~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~--------~~~~~l~~~~~~~Gv~~~Ri~f~~~~~~~ 353 (468)
T PF13844_consen 282 PEDAVVFGSFNNLFKISPETLDLWARILKAVPNSRLWLLRFPA--------SGEARLRRRFAAHGVDPDRIIFSPVAPRE 353 (468)
T ss_dssp -SSSEEEEE-S-GGG--HHHHHHHHHHHHHSTTEEEEEEETST--------THHHHHHHHHHHTTS-GGGEEEEE---HH
T ss_pred CCCceEEEecCccccCCHHHHHHHHHHHHhCCCcEEEEeeCCH--------HHHHHHHHHHHHcCCChhhEEEcCCCCHH
Confidence 4568999999999999999999999999999888888775321 111222211 13577777887754
Q ss_pred hhh---ccccccccc---ccCChhHHHHHHHhCCceecccccccc-hhhHHHHHhhhceeeeecCCcchHHHHHHHHHHH
Q 012587 339 EVL---AHSAVGGFL---THCGWNSTLESIVAGMPMICWPSFADQ-QINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLM 411 (460)
Q Consensus 339 ~il---~~~~~~~~I---~HGG~gs~~eal~~GvP~l~~P~~~DQ-~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l 411 (460)
+-| ..+++ ++ ..+|.+|++|||+.|||+|.+|-..=. ..-+..+ ..+|+...+.. +.++-.+.--++-
T Consensus 354 ehl~~~~~~DI--~LDT~p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL-~~lGl~ElIA~--s~~eYv~~Av~La 428 (468)
T PF13844_consen 354 EHLRRYQLADI--CLDTFPYNGGTTTLDALWMGVPVVTLPGETMASRVGASIL-RALGLPELIAD--SEEEYVEIAVRLA 428 (468)
T ss_dssp HHHHHGGG-SE--EE--SSS--SHHHHHHHHHT--EEB---SSGGGSHHHHHH-HHHT-GGGB-S--SHHHHHHHHHHHH
T ss_pred HHHHHhhhCCE--EeeCCCCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHH-HHcCCchhcCC--CHHHHHHHHHHHh
Confidence 433 44665 43 568999999999999999999954322 2233445 46777755532 3444333333343
Q ss_pred hH
Q 012587 412 VE 413 (460)
Q Consensus 412 ~~ 413 (460)
+|
T Consensus 429 ~D 430 (468)
T PF13844_consen 429 TD 430 (468)
T ss_dssp H-
T ss_pred CC
Confidence 44
|
|
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.0031 Score=62.38 Aligned_cols=84 Identities=18% Similarity=0.277 Sum_probs=60.5
Q ss_pred cCCceeeeecChH---hhhcccccccccc--c-------CCh-hHHHHHHHhCCceecccccccchhhHHHHHhhhceee
Q 012587 326 KERGCIAGWVPQE---EVLAHSAVGGFLT--H-------CGW-NSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGL 392 (460)
Q Consensus 326 ~~n~~~~~~vp~~---~il~~~~~~~~I~--H-------GG~-gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~ 392 (460)
.+++.+.+|+|+. .++..+++ +|. . -|. .+++||+++|+|+|+....+ ....+ +.-..|.
T Consensus 278 ~~~V~~~G~~~~~el~~~l~~aDv--~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g----~~E~v-~~~~~G~ 350 (406)
T PRK15427 278 EDVVEMPGFKPSHEVKAMLDDADV--FLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSG----IPELV-EADKSGW 350 (406)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCCE--EEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCC----chhhh-cCCCceE
Confidence 4678888999975 46778887 553 2 344 57899999999999875432 33445 3434677
Q ss_pred eecCCcchHHHHHHHHHHHh-HhHHHHH
Q 012587 393 DIKDLCDRNIVEKAVNDLMV-ERKEEFM 419 (460)
Q Consensus 393 ~~~~~~~~~~l~~~i~~~l~-~~~~~~~ 419 (460)
.+ ..-+.+++.++|.++++ | ++.+
T Consensus 351 lv-~~~d~~~la~ai~~l~~~d--~~~~ 375 (406)
T PRK15427 351 LV-PENDAQALAQRLAAFSQLD--TDEL 375 (406)
T ss_pred Ee-CCCCHHHHHHHHHHHHhCC--HHHH
Confidence 76 44689999999999998 7 5533
|
|
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.004 Score=53.39 Aligned_cols=89 Identities=22% Similarity=0.263 Sum_probs=64.5
Q ss_pred hcCCceeeeecC---hHhhhccccccccccc----CChhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecCC
Q 012587 325 TKERGCIAGWVP---QEEVLAHSAVGGFLTH----CGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDL 397 (460)
Q Consensus 325 ~~~n~~~~~~vp---~~~il~~~~~~~~I~H----GG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~ 397 (460)
..+++.+.++++ ...++..+++ +|+. |...++.||+++|+|+|+.- ...+...+ ...+.|..++ .
T Consensus 71 ~~~~i~~~~~~~~~~l~~~~~~~di--~v~~s~~e~~~~~~~Ea~~~g~pvI~~~----~~~~~e~~-~~~~~g~~~~-~ 142 (172)
T PF00534_consen 71 LKENIIFLGYVPDDELDELYKSSDI--FVSPSRNEGFGLSLLEAMACGCPVIASD----IGGNNEII-NDGVNGFLFD-P 142 (172)
T ss_dssp CGTTEEEEESHSHHHHHHHHHHTSE--EEE-BSSBSS-HHHHHHHHTT-EEEEES----STHHHHHS-GTTTSEEEES-T
T ss_pred cccccccccccccccccccccccee--ccccccccccccccccccccccceeecc----ccCCceee-ccccceEEeC-C
Confidence 346888899998 2677788887 6665 56779999999999999753 44555556 4556688885 3
Q ss_pred cchHHHHHHHHHHHhHhHHHHHHHHH
Q 012587 398 CDRNIVEKAVNDLMVERKEEFMESAD 423 (460)
Q Consensus 398 ~~~~~l~~~i~~~l~~~~~~~~~~a~ 423 (460)
.+.+++.++|.+++++ ++.+++..
T Consensus 143 ~~~~~l~~~i~~~l~~--~~~~~~l~ 166 (172)
T PF00534_consen 143 NDIEELADAIEKLLND--PELRQKLG 166 (172)
T ss_dssp TSHHHHHHHHHHHHHH--HHHHHHHH
T ss_pred CCHHHHHHHHHHHHCC--HHHHHHHH
Confidence 4999999999999998 64444433
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.0074 Score=61.90 Aligned_cols=75 Identities=11% Similarity=0.014 Sum_probs=51.2
Q ss_pred CceeeeecChH-hhhcccccccccc---cCC-hhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecCCcchHH
Q 012587 328 RGCIAGWVPQE-EVLAHSAVGGFLT---HCG-WNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNI 402 (460)
Q Consensus 328 n~~~~~~vp~~-~il~~~~~~~~I~---HGG-~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~~~~ 402 (460)
++.+.++.++. .+++.+++ ||. +=| ..++.||+++|+|+|+....+.. . + .. |.+..+. -+.++
T Consensus 602 ~V~FLG~~dd~~~lyasaDV--FVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~e----~-V-~~-g~nGll~--~D~Ea 670 (794)
T PLN02501 602 NLNFLKGRDHADDSLHGYKV--FINPSISDVLCTATAEALAMGKFVVCADHPSNE----F-F-RS-FPNCLTY--KTSED 670 (794)
T ss_pred EEEecCCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCCEEEecCCCCc----e-E-ee-cCCeEec--CCHHH
Confidence 34455666654 58988887 664 223 46899999999999998765422 1 3 22 3332332 47899
Q ss_pred HHHHHHHHHhH
Q 012587 403 VEKAVNDLMVE 413 (460)
Q Consensus 403 l~~~i~~~l~~ 413 (460)
+.+++.++|++
T Consensus 671 fAeAI~~LLsd 681 (794)
T PLN02501 671 FVAKVKEALAN 681 (794)
T ss_pred HHHHHHHHHhC
Confidence 99999999986
|
|
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.0032 Score=62.39 Aligned_cols=87 Identities=17% Similarity=0.133 Sum_probs=60.1
Q ss_pred CCceeeeecChHh---hhcccccccccccCC----hhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecCCcc
Q 012587 327 ERGCIAGWVPQEE---VLAHSAVGGFLTHCG----WNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCD 399 (460)
Q Consensus 327 ~n~~~~~~vp~~~---il~~~~~~~~I~HGG----~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~ 399 (460)
+++.+.+|+++.+ ++..+++.++|...- ..+++||+++|+|+|+.... .....+ +..+.|..+....+
T Consensus 289 ~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vg----g~~e~i-~~~~~G~l~~~~~~ 363 (407)
T cd04946 289 ISVNFTGELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVG----GTPEIV-DNGGNGLLLSKDPT 363 (407)
T ss_pred ceEEEecCCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCC----CcHHHh-cCCCcEEEeCCCCC
Confidence 4677789999764 444433333654432 46899999999999986533 345556 45347887755568
Q ss_pred hHHHHHHHHHHHhHhHHHHHH
Q 012587 400 RNIVEKAVNDLMVERKEEFME 420 (460)
Q Consensus 400 ~~~l~~~i~~~l~~~~~~~~~ 420 (460)
.+++.++|.++++| +..++
T Consensus 364 ~~~la~~I~~ll~~--~~~~~ 382 (407)
T cd04946 364 PNELVSSLSKFIDN--EEEYQ 382 (407)
T ss_pred HHHHHHHHHHHHhC--HHHHH
Confidence 89999999999986 55443
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >PRK10017 colanic acid biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.21 Score=49.45 Aligned_cols=181 Identities=10% Similarity=0.105 Sum_probs=100.6
Q ss_pred hhhhhhcCCCCcEEEEEecCcccC------C-HHH---HHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCC--chHHHHH
Q 012587 257 CMAWLDKQPKQSVIYVSFGSIAVM------S-RDQ---LIEFYYGLVHSKKSFLWVIRPDLISGKDGENQI--PEELLEA 324 (460)
Q Consensus 257 l~~~l~~~~~~~~V~vs~GS~~~~------~-~~~---~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~ 324 (460)
+..|+...+.+++|-|+.-..... . .+. +..+++.+.+.|+++++..-...... ...+.. ...+.+.
T Consensus 224 ~~~~~~~~~~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~~g~~Vv~lp~~~~~~~-~~~dD~~~~~~l~~~ 302 (426)
T PRK10017 224 VQHWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRIIDEGYQVIALSTCTGIDS-YNKDDRMVALNLRQH 302 (426)
T ss_pred hhhhhcccccCCEEEEEecccccccccccccHHHHHHHHHHHHHHHHHCCCeEEEEecccCccC-CCCchHHHHHHHHHh
Confidence 344554334567888876543211 1 122 33444555556888766542110000 000111 1122233
Q ss_pred hc--CCceee--eecCh--HhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHHHHHhhhceeee-ec-C
Q 012587 325 TK--ERGCIA--GWVPQ--EEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLD-IK-D 396 (460)
Q Consensus 325 ~~--~n~~~~--~~vp~--~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~-~~-~ 396 (460)
++ ++..+. ++-+. ..++.+|++ +|..==+ ++.-|+..|||.+.++. |....+ .+ +.+|.... .+ +
T Consensus 303 ~~~~~~~~vi~~~~~~~e~~~iIs~~dl--~ig~RlH-a~I~a~~~gvP~i~i~Y--~~K~~~-~~-~~lg~~~~~~~~~ 375 (426)
T PRK10017 303 VSDPARYHVVMDELNDLEMGKILGACEL--TVGTRLH-SAIISMNFGTPAIAINY--EHKSAG-IM-QQLGLPEMAIDIR 375 (426)
T ss_pred cccccceeEecCCCChHHHHHHHhhCCE--EEEecch-HHHHHHHcCCCEEEeee--hHHHHH-HH-HHcCCccEEechh
Confidence 32 233332 33343 477888886 7764333 45568899999999987 433333 34 46787765 44 7
Q ss_pred CcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHh
Q 012587 397 LCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKM 452 (460)
Q Consensus 397 ~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~ 452 (460)
+++.++|.+.+.++++|+ +.+++..++-.+++++. ....+.++++.+.+
T Consensus 376 ~l~~~~Li~~v~~~~~~r-~~~~~~l~~~v~~~r~~------~~~~~~~~~~~~~~ 424 (426)
T PRK10017 376 HLLDGSLQAMVADTLGQL-PALNARLAEAVSRERQT------GMQMVQSVLERIGE 424 (426)
T ss_pred hCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHH------HHHHHHHHHHHhcc
Confidence 889999999999999953 56777766666665552 14456666666543
|
|
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0017 Score=62.42 Aligned_cols=111 Identities=17% Similarity=0.331 Sum_probs=78.7
Q ss_pred hcCCceeeeecChHhhh---ccccccccccc-------CCh------hHHHHHHHhCCceecccccccchhhHHHHHhhh
Q 012587 325 TKERGCIAGWVPQEEVL---AHSAVGGFLTH-------CGW------NSTLESIVAGMPMICWPSFADQQINSRFVGEVW 388 (460)
Q Consensus 325 ~~~n~~~~~~vp~~~il---~~~~~~~~I~H-------GG~------gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~ 388 (460)
..+|+.+.+|+|+.++. .. +.+++... +.+ +-+.+++++|+|+|+. ++...+..+ ++.
T Consensus 205 ~~~~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~----~~~~~~~~V-~~~ 278 (333)
T PRK09814 205 NSANISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVW----SKAAIADFI-VEN 278 (333)
T ss_pred cCCCeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEEC----CCccHHHHH-HhC
Confidence 44689999999987664 33 33222211 111 2377889999999985 456677777 578
Q ss_pred ceeeeecCCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHH
Q 012587 389 KLGLDIKDLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVN 448 (460)
Q Consensus 389 G~g~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 448 (460)
++|..++ +.+++.+.+.++..++-..+++|++++++++++ |..-.+++.+++.
T Consensus 279 ~~G~~v~---~~~el~~~l~~~~~~~~~~m~~n~~~~~~~~~~----g~~~~~~~~~~~~ 331 (333)
T PRK09814 279 GLGFVVD---SLEELPEIIDNITEEEYQEMVENVKKISKLLRN----GYFTKKALVDAIK 331 (333)
T ss_pred CceEEeC---CHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhc----chhHHHHHHHHHh
Confidence 9999995 667899999887655446789999999999997 6665666665554
|
|
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.071 Score=54.16 Aligned_cols=98 Identities=20% Similarity=0.231 Sum_probs=62.9
Q ss_pred cCCceeeeecChHhhhcccccccccc---cCCh-hHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeec-C--Cc
Q 012587 326 KERGCIAGWVPQEEVLAHSAVGGFLT---HCGW-NSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIK-D--LC 398 (460)
Q Consensus 326 ~~n~~~~~~vp~~~il~~~~~~~~I~---HGG~-gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~-~--~~ 398 (460)
.+++.+.++.+...++..+++ +|. .-|. -+++||+++|+|+|+..... .+...+ +.-..|..++ . .-
T Consensus 375 ~~~V~f~G~~~~~~~~~~adv--~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~---G~~eiI-~~g~nG~lv~~~~~~~ 448 (500)
T TIGR02918 375 QDYIHLKGHRNLSEVYKDYEL--YLSASTSEGFGLTLMEAVGSGLGMIGFDVNY---GNPTFI-EDNKNGYLIPIDEEED 448 (500)
T ss_pred CCeEEEcCCCCHHHHHHhCCE--EEEcCccccccHHHHHHHHhCCCEEEecCCC---CCHHHc-cCCCCEEEEeCCcccc
Confidence 456777788888899999997 554 3343 58999999999999975421 133344 3323466654 1 22
Q ss_pred c----hHHHHHHHHHHHhH-hHHHHHHHHHHHHHHH
Q 012587 399 D----RNIVEKAVNDLMVE-RKEEFMESADRMANLA 429 (460)
Q Consensus 399 ~----~~~l~~~i~~~l~~-~~~~~~~~a~~l~~~~ 429 (460)
+ .+.|+++|.+++++ ....+.+++.+.++.+
T Consensus 449 d~~~~~~~la~~I~~ll~~~~~~~~~~~a~~~a~~f 484 (500)
T TIGR02918 449 DEDQIITALAEKIVEYFNSNDIDAFHEYSYQIAEGF 484 (500)
T ss_pred chhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHhc
Confidence 3 78899999999963 1123445555544443
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.031 Score=54.51 Aligned_cols=83 Identities=17% Similarity=0.217 Sum_probs=58.8
Q ss_pred cCCceeeeecCh-Hhhhccccccccccc--CChhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecCCcchHH
Q 012587 326 KERGCIAGWVPQ-EEVLAHSAVGGFLTH--CGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNI 402 (460)
Q Consensus 326 ~~n~~~~~~vp~-~~il~~~~~~~~I~H--GG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~~~~ 402 (460)
++++.+.++.++ ..++..+++-++.++ |...++.||+++|+|+|+..... .....+ +.-..|..+ ...+.++
T Consensus 260 ~~~v~~~g~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~---g~~~~v-~~~~~G~lv-~~~d~~~ 334 (372)
T cd04949 260 EDYVFLKGYTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNY---GPSEII-EDGENGYLV-PKGDIEA 334 (372)
T ss_pred cceEEEcCCCCCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCC---CcHHHc-ccCCCceEe-CCCcHHH
Confidence 456777777664 678888998444454 33468999999999999864321 123344 344567776 5568999
Q ss_pred HHHHHHHHHhH
Q 012587 403 VEKAVNDLMVE 413 (460)
Q Consensus 403 l~~~i~~~l~~ 413 (460)
+.++|.++++|
T Consensus 335 la~~i~~ll~~ 345 (372)
T cd04949 335 LAEAIIELLND 345 (372)
T ss_pred HHHHHHHHHcC
Confidence 99999999997
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.051 Score=52.61 Aligned_cols=103 Identities=10% Similarity=0.022 Sum_probs=66.3
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhC--CCeEEEEeCccchhHHhhccccccccccCCCCceE-EecCCCCCCCCCCCC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHA--GIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQF-KTLTDGLPRDHPRTP 83 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 83 (460)
|||+|+-..+.||+.-+.++.++|+++ +.+|++++.+.+.+-++. .|.++- ..++.. .. .
T Consensus 1 mrILii~~~~iGD~il~tP~l~~Lk~~~P~a~I~~l~~~~~~~l~~~-----------~P~vd~vi~~~~~--~~----~ 63 (348)
T PRK10916 1 MKILVIGPSWVGDMMMSQSLYRTLKARYPQAIIDVMAPAWCRPLLSR-----------MPEVNEAIPMPLG--HG----A 63 (348)
T ss_pred CcEEEEccCcccHHHhHHHHHHHHHHHCCCCeEEEEechhhHHHHhc-----------CCccCEEEecccc--cc----h
Confidence 589999999999999999999999996 999999998665444433 333432 222211 00 0
Q ss_pred CChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEE
Q 012587 84 DKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIY 137 (460)
Q Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~ 137 (460)
..+ ... .. +...++. .++|++|.-........++...|+|.-.
T Consensus 64 ~~~----~~~----~~-l~~~lr~--~~yD~vidl~~~~~s~~l~~~~~~~~ri 106 (348)
T PRK10916 64 LEI----GER----RR-LGHSLRE--KRYDRAYVLPNSFKSALVPFFAGIPHRT 106 (348)
T ss_pred hhh----HHH----HH-HHHHHHh--cCCCEEEECCCcHHHHHHHHHcCCCeEe
Confidence 000 000 11 1222333 3999999765555667778888888655
|
|
| >PRK10422 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.2 Score=48.47 Aligned_cols=110 Identities=13% Similarity=0.105 Sum_probs=69.0
Q ss_pred CCCCCCcEEEEEcCCCCCCHHHHHHHHHHHHhC--CCeEEEEeCccchhHHhhccccccccccCCCCce-EEecCCCCCC
Q 012587 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHA--GIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQ-FKTLTDGLPR 77 (460)
Q Consensus 1 ~~~~~~~~il~~~~~~~Gh~~p~l~La~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 77 (460)
|.+ +++||+|+-....||+.-+.++.++|+++ +.+|++++.+.+.+-+.. .|.++ +..++..
T Consensus 1 ~~~-~~~~ILii~~~~iGD~vl~~P~l~~Lk~~~P~a~I~~l~~~~~~~l~~~-----------~P~id~vi~~~~~--- 65 (352)
T PRK10422 1 MDK-PFRRILIIKMRFHGDMLLTTPVISSLKKNYPDAKIDVLLYQDTIPILSE-----------NPEINALYGIKNK--- 65 (352)
T ss_pred CCC-CCceEEEEEecccCceeeHHHHHHHHHHHCCCCeEEEEeccChHHHhcc-----------CCCceEEEEeccc---
Confidence 444 46799999999999999999999999998 899999998766554432 33343 3333311
Q ss_pred CCCCCCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEE
Q 012587 78 DHPRTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIY 137 (460)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~ 137 (460)
.......+..+. ..++ .++. .++|++|.-........++...|.|...
T Consensus 66 -----~~~~~~~~~~~~----~l~~-~lr~--~~yD~vidl~~~~~s~ll~~l~~a~~ri 113 (352)
T PRK10422 66 -----KAGASEKIKNFF----SLIK-VLRA--NKYDLIVNLTDQWMVALLVRLLNARVKI 113 (352)
T ss_pred -----cccHHHHHHHHH----HHHH-HHhh--CCCCEEEEcccchHHHHHHHHhCCCeEE
Confidence 001111111111 1112 2233 3999999665444556677777887755
|
|
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.34 Score=47.95 Aligned_cols=100 Identities=11% Similarity=0.006 Sum_probs=59.4
Q ss_pred HHHHHHHHhhCCCcE-EEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecC-h---Hhhhccccccccccc----CCh
Q 012587 285 LIEFYYGLVHSKKSF-LWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVP-Q---EEVLAHSAVGGFLTH----CGW 355 (460)
Q Consensus 285 ~~~~~~al~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp-~---~~il~~~~~~~~I~H----GG~ 355 (460)
+..+++++..++.++ ++.++.+ .. . ...++...++.. + ..++..+++ ||.- |--
T Consensus 258 ~~~li~A~~~l~~~~~L~ivG~g------~~-~--------~~~~v~~~g~~~~~~~l~~~y~~aDv--fV~pS~~Egfp 320 (405)
T PRK10125 258 DQQLVREMMALGDKIELHTFGKF------SP-F--------TAGNVVNHGFETDKRKLMSALNQMDA--LVFSSRVDNYP 320 (405)
T ss_pred HHHHHHHHHhCCCCeEEEEEcCC------Cc-c--------cccceEEecCcCCHHHHHHHHHhCCE--EEECCccccCc
Confidence 456778887765443 3444321 10 1 123555556653 2 445666786 6643 234
Q ss_pred hHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecCCcchHHHHHHHH
Q 012587 356 NSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVN 408 (460)
Q Consensus 356 gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~ 408 (460)
.++.||+++|+|+|.....+ ....+ +. +.|..++ .-+.+.|++.++
T Consensus 321 ~vilEAmA~G~PVVat~~gG----~~Eiv-~~-~~G~lv~-~~d~~~La~~~~ 366 (405)
T PRK10125 321 LILCEALSIGVPVIATHSDA----AREVL-QK-SGGKTVS-EEEVLQLAQLSK 366 (405)
T ss_pred CHHHHHHHcCCCEEEeCCCC----hHHhE-eC-CcEEEEC-CCCHHHHHhccC
Confidence 68999999999999997654 22234 33 5687774 447777876543
|
|
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.082 Score=46.93 Aligned_cols=48 Identities=23% Similarity=0.225 Sum_probs=35.6
Q ss_pred cCCceeeeecCh----HhhhcccccccccccCC----hhHHHHHHHhCCceecccccc
Q 012587 326 KERGCIAGWVPQ----EEVLAHSAVGGFLTHCG----WNSTLESIVAGMPMICWPSFA 375 (460)
Q Consensus 326 ~~n~~~~~~vp~----~~il~~~~~~~~I~HGG----~gs~~eal~~GvP~l~~P~~~ 375 (460)
.+|+.+.+++++ ..++..+++ +|+-.. .+++.||+++|+|+|+.+..+
T Consensus 160 ~~~v~~~~~~~~~~~~~~~~~~~di--~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~ 215 (229)
T cd01635 160 LDRVIFLGGLDPEELLALLLAAADV--FVLPSLREGFGLVVLEAMACGLPVIATDVGG 215 (229)
T ss_pred cccEEEeCCCCcHHHHHHHhhcCCE--EEecccccCcChHHHHHHhCCCCEEEcCCCC
Confidence 457888887632 334444777 776665 689999999999999988654
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.017 Score=47.55 Aligned_cols=103 Identities=15% Similarity=0.191 Sum_probs=66.7
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCCCCChH
Q 012587 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPDKFP 87 (460)
Q Consensus 8 ~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (460)
||++++.....| ...+++.|.++||+|++++.....+.... ..++.+..++.. .....
T Consensus 1 KIl~i~~~~~~~---~~~~~~~L~~~g~~V~ii~~~~~~~~~~~-----------~~~i~~~~~~~~--------~k~~~ 58 (139)
T PF13477_consen 1 KILLIGNTPSTF---IYNLAKELKKRGYDVHIITPRNDYEKYEI-----------IEGIKVIRLPSP--------RKSPL 58 (139)
T ss_pred CEEEEecCcHHH---HHHHHHHHHHCCCEEEEEEcCCCchhhhH-----------hCCeEEEEecCC--------CCccH
Confidence 678887776666 45779999999999999998444333322 234777766422 11122
Q ss_pred HHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcc---hHHHHHHHhC-CceEEEec
Q 012587 88 ELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS---RAIDAAREVG-VSIIYFRT 140 (460)
Q Consensus 88 ~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~---~~~~~A~~lg-iP~v~~~~ 140 (460)
..+. . -.+..++++. +||+|.+..... .+..++...| +|+|....
T Consensus 59 ~~~~-----~-~~l~k~ik~~--~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~h 107 (139)
T PF13477_consen 59 NYIK-----Y-FRLRKIIKKE--KPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVH 107 (139)
T ss_pred HHHH-----H-HHHHHHhccC--CCCEEEEecCChHHHHHHHHHHHcCCCCEEEEec
Confidence 2221 1 2557777776 999997766543 3556678888 89986544
|
|
| >PF06722 DUF1205: Protein of unknown function (DUF1205); InterPro: IPR010610 This entry represents a conserved region of unknown function within bacterial glycosyl transferases | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.00091 Score=50.97 Aligned_cols=51 Identities=16% Similarity=0.236 Sum_probs=42.4
Q ss_pred hhhhhhhcCCCCcEEEEEecCcccC---CH--HHHHHHHHHHhhCCCcEEEEEccC
Q 012587 256 SCMAWLDKQPKQSVIYVSFGSIAVM---SR--DQLIEFYYGLVHSKKSFLWVIRPD 306 (460)
Q Consensus 256 ~l~~~l~~~~~~~~V~vs~GS~~~~---~~--~~~~~~~~al~~~~~~~i~~~~~~ 306 (460)
.+.+|+...+++|.|+||+||.... .. ..+..++++++.++..+|+.+...
T Consensus 29 ~~P~Wl~~~~~RpRVcvT~G~~~~~~~g~~~~~~l~~ll~ala~ldvEvV~a~~~~ 84 (97)
T PF06722_consen 29 VVPDWLLEPPGRPRVCVTLGTSVRMFFGPGGVPLLRRLLEALAGLDVEVVVALPAA 84 (97)
T ss_dssp EEEGGGSSSTSSEEEEEEETHHHCHHHSCHHHCHHHHHHHHHHTSSSEEEEEETTC
T ss_pred CCCcccccCCCCCEEEEEcCCCccccccccchHHHHHHHHHHhhCCcEEEEECCHH
Confidence 3667998888999999999998754 22 478889999999999999998654
|
Many proteins containing this domain are members of the glycosyl transferase family 28 IPR004276 from INTERPRO.; PDB: 3OTH_A 3OTG_A 3OTI_A 3D0R_A 3D0Q_B 2P6P_A 3UYK_A 3UYL_B 3TSA_B 2YJN_A. |
| >COG1817 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.34 Score=44.65 Aligned_cols=113 Identities=15% Similarity=0.096 Sum_probs=74.0
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccc-hhHHhhccccccccccCCCCceEEecCCCCCCCCCCCCCCh
Q 012587 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHY-YDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPDKF 86 (460)
Q Consensus 8 ~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (460)
||.|- .+-.-|+.-+..|-.+|.++||+|.+-+-... ...+.+.+| +.+..+... ...++
T Consensus 2 kVwiD-I~n~~hvhfFk~lI~elekkG~ev~iT~rd~~~v~~LLd~yg-----------f~~~~Igk~-------g~~tl 62 (346)
T COG1817 2 KVWID-IGNPPHVHFFKNLIWELEKKGHEVLITCRDFGVVTELLDLYG-----------FPYKSIGKH-------GGVTL 62 (346)
T ss_pred eEEEE-cCCcchhhHHHHHHHHHHhCCeEEEEEEeecCcHHHHHHHhC-----------CCeEeeccc-------CCccH
Confidence 44432 33446888889999999999999999886332 224444443 666666531 11233
Q ss_pred HHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEEEecchh
Q 012587 87 PELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISA 143 (460)
Q Consensus 87 ~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~ 143 (460)
...+-.... -.-.+.+++.+. +||+.+. .....+..+|.-+|+|.|.+....-
T Consensus 63 ~~Kl~~~~e-R~~~L~ki~~~~--kpdv~i~-~~s~~l~rvafgLg~psIi~~D~eh 115 (346)
T COG1817 63 KEKLLESAE-RVYKLSKIIAEF--KPDVAIG-KHSPELPRVAFGLGIPSIIFVDNEH 115 (346)
T ss_pred HHHHHHHHH-HHHHHHHHHhhc--CCceEee-cCCcchhhHHhhcCCceEEecCChh
Confidence 323222222 223457777776 9999999 5667789999999999999887643
|
|
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.004 Score=50.98 Aligned_cols=80 Identities=26% Similarity=0.321 Sum_probs=50.1
Q ss_pred cCCceeeeecCh-Hhhhccccccccccc--CC-hhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecCCcchH
Q 012587 326 KERGCIAGWVPQ-EEVLAHSAVGGFLTH--CG-WNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRN 401 (460)
Q Consensus 326 ~~n~~~~~~vp~-~~il~~~~~~~~I~H--GG-~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~~~ 401 (460)
.+|+.+.+|++. .++++.+++.+..+. .| .+++.|++++|+|+|+.+.. ..... +..+.|..+ .-+++
T Consensus 52 ~~~v~~~g~~~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~~-----~~~~~-~~~~~~~~~--~~~~~ 123 (135)
T PF13692_consen 52 RPNVRFHGFVEELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDNG-----AEGIV-EEDGCGVLV--ANDPE 123 (135)
T ss_dssp HCTEEEE-S-HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHHH-----CHCHS----SEEEE---TT-HH
T ss_pred CCCEEEcCCHHHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCcc-----hhhhe-eecCCeEEE--CCCHH
Confidence 469999999873 677889998555442 23 48999999999999997651 22223 335777766 35999
Q ss_pred HHHHHHHHHHhH
Q 012587 402 IVEKAVNDLMVE 413 (460)
Q Consensus 402 ~l~~~i~~~l~~ 413 (460)
++.+++.++++|
T Consensus 124 ~l~~~i~~l~~d 135 (135)
T PF13692_consen 124 ELAEAIERLLND 135 (135)
T ss_dssp HHHHHHHHHHH-
T ss_pred HHHHHHHHHhcC
Confidence 999999999875
|
|
| >TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.11 Score=49.54 Aligned_cols=131 Identities=14% Similarity=0.045 Sum_probs=74.1
Q ss_pred CCcEEEEEecCcc---cCCHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeee--cC-hHh
Q 012587 266 KQSVIYVSFGSIA---VMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGW--VP-QEE 339 (460)
Q Consensus 266 ~~~~V~vs~GS~~---~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~--vp-~~~ 339 (460)
+++.|.+..|+.. ..+.+.+.++++.+.+.++++++..+++ .+......+.+..+ +..+.+- ++ -.+
T Consensus 178 ~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~------~e~~~~~~i~~~~~-~~~l~g~~sL~el~a 250 (319)
T TIGR02193 178 PAPYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGND------AEKQRAERIAEALP-GAVVLPKMSLAEVAA 250 (319)
T ss_pred CCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCH------HHHHHHHHHHhhCC-CCeecCCCCHHHHHH
Confidence 4566666666533 3456678888888876677776654321 00011112222222 2233332 33 377
Q ss_pred hhcccccccccccCChhHHHHHHHhCCceecccccccchhhHHHHHhhhcee---eee-c-CCcchHHHHHHHHHHH
Q 012587 340 VLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLG---LDI-K-DLCDRNIVEKAVNDLM 411 (460)
Q Consensus 340 il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g---~~~-~-~~~~~~~l~~~i~~~l 411 (460)
++++|++ +|+. -.|.++=|.+.|+|+|.+=-..+ ..+-. =+|-. +.- . ...+++++.+++.++|
T Consensus 251 li~~a~l--~I~~-DSgp~HlAaa~g~P~i~lfg~t~----p~~~~-P~~~~~~~~~~~~~~~I~~~~V~~ai~~~~ 319 (319)
T TIGR02193 251 LLAGADA--VVGV-DTGLTHLAAALDKPTVTLYGATD----PGRTG-GYGKPNVALLGESGANPTPDEVLAALEELL 319 (319)
T ss_pred HHHcCCE--EEeC-CChHHHHHHHcCCCEEEEECCCC----Hhhcc-cCCCCceEEccCccCCCCHHHHHHHHHhhC
Confidence 8888886 7776 78999999999999987621111 11110 01111 111 1 5789999999888765
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.73 Score=46.84 Aligned_cols=74 Identities=20% Similarity=0.146 Sum_probs=49.6
Q ss_pred cCCceeeeecCh-Hhhhcccccccccc---cCC-hhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecCCcch
Q 012587 326 KERGCIAGWVPQ-EEVLAHSAVGGFLT---HCG-WNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDR 400 (460)
Q Consensus 326 ~~n~~~~~~vp~-~~il~~~~~~~~I~---HGG-~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~~ 400 (460)
.+++.+.+|..+ ..+|..+++ ||. +-| .+++.||+++|+|+|+.... .+...+ +.-..|..++ .-+.
T Consensus 454 ~d~V~FlG~~~Dv~~~LaaADV--fVlPS~~EGfp~vlLEAMA~GlPVVATdvG----G~~EiV-~dG~nG~LVp-~~D~ 525 (578)
T PRK15490 454 LERILFVGASRDVGYWLQKMNV--FILFSRYEGLPNVLIEAQMVGVPVISTPAG----GSAECF-IEGVSGFILD-DAQT 525 (578)
T ss_pred CCcEEECCChhhHHHHHHhCCE--EEEcccccCccHHHHHHHHhCCCEEEeCCC----CcHHHc-ccCCcEEEEC-CCCh
Confidence 467888888654 667888897 764 345 46999999999999977643 345555 3445677774 2344
Q ss_pred HHHHHHH
Q 012587 401 NIVEKAV 407 (460)
Q Consensus 401 ~~l~~~i 407 (460)
+.+.+++
T Consensus 526 ~aLa~ai 532 (578)
T PRK15490 526 VNLDQAC 532 (578)
T ss_pred hhHHHHH
Confidence 4454444
|
|
| >COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.33 Score=46.60 Aligned_cols=104 Identities=15% Similarity=0.147 Sum_probs=66.9
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhC--CCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCCC
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHA--GIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTP 83 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (460)
||||+++-....||+.=++++-+.|+++ +.++++++.+.+.+-+... +.++-...-.. . .
T Consensus 1 ~~kIliir~~~iGD~vlt~p~~~~lk~~~P~a~i~~~~~~~~~~i~~~~-----------p~I~~vi~~~~--~-----~ 62 (334)
T COG0859 1 MMKILVIRLSKLGDVVLTLPLLRTLKKAYPNAKIDVLVPKGFAPILKLN-----------PEIDKVIIIDK--K-----K 62 (334)
T ss_pred CceEEEEeccchhHHHhHHHHHHHHHHHCCCCEEEEEeccchHHHHhcC-----------hHhhhhccccc--c-----c
Confidence 6899999999999999999999999998 5999999985554444322 22221111000 0 0
Q ss_pred CChHHHHHHHHhhCcHHHHHHHHcC-CCCccEEEEcCCcchHHHHHHHhCCceEE
Q 012587 84 DKFPELVDSLNCATPPLLKEMVSDS-KSPVNCIITDGYMSRAIDAAREVGVSIIY 137 (460)
Q Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~~~-~~~pD~vv~D~~~~~~~~~A~~lgiP~v~ 137 (460)
.. ........+.+.+ ..++|+|+.=...+-...++...++|.-.
T Consensus 63 ~~----------~~~~~~~~l~~~lr~~~yD~vidl~~~~ksa~l~~~~~~~~r~ 107 (334)
T COG0859 63 KG----------LGLKERLALLRTLRKERYDAVIDLQGLLKSALLALLLGIPFRI 107 (334)
T ss_pred cc----------cchHHHHHHHHHhhccCCCEEEECcccHHHHHHHHHhCCCccc
Confidence 01 0112223333333 23899999877777677777788888765
|
|
| >TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.2 Score=48.20 Aligned_cols=102 Identities=13% Similarity=0.073 Sum_probs=64.4
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhC--CCeEEEEeCccchhHHhhccccccccccCCCCce-EEecCCCCCCCCCCCCC
Q 012587 8 HVAILPLPAVGHVNSMLNLAELLGHA--GIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQ-FKTLTDGLPRDHPRTPD 84 (460)
Q Consensus 8 ~il~~~~~~~Gh~~p~l~La~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 84 (460)
||+|+-..+.||+.-+.++.++|++. +.+|++++.+.+.+-+.. .+.++ +..++.. .. ..
T Consensus 1 rILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~~-----------~p~id~v~~~~~~--~~----~~ 63 (334)
T TIGR02195 1 KILVIGPSWVGDMVMAQSLYRLLKKRYPQAVIDVLAPAWCRPLLER-----------MPEIRQAIDMPLG--HG----AL 63 (334)
T ss_pred CEEEEccchhHHHHHHHHHHHHHHHHCCCCEEEEEechhhHHHHhc-----------CchhceeeecCCc--cc----ch
Confidence 69999999999999999999999997 999999998554444432 22332 2222210 00 00
Q ss_pred ChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEE
Q 012587 85 KFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIY 137 (460)
Q Consensus 85 ~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~ 137 (460)
.+. . . ..+...++. .++|++|.-........++...|+|.-.
T Consensus 64 ~~~----~----~-~~~~~~lr~--~~yD~vi~l~~~~~s~ll~~~~~~~~ri 105 (334)
T TIGR02195 64 ELT----E----R-RRLGRSLRE--ERYDQAIVLPNSLKSALIPFFAGIPHRT 105 (334)
T ss_pred hhh----H----H-HHHHHHHhh--cCCCEEEECCCCHHHHHHHHHcCCCcee
Confidence 110 0 0 111222333 3999999876655666777788888643
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.05 Score=54.38 Aligned_cols=121 Identities=21% Similarity=0.329 Sum_probs=80.7
Q ss_pred CCCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHH---HH---hcCCceeeeecChH
Q 012587 265 PKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELL---EA---TKERGCIAGWVPQE 338 (460)
Q Consensus 265 ~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~---~~---~~~n~~~~~~vp~~ 338 (460)
++..+||++|--....++..++..++.++..+..++|....+.. |. ..++ +. .++.+.+.+-++..
T Consensus 756 p~d~vvf~~FNqLyKidP~~l~~W~~ILk~VPnS~LwllrfPa~---ge-----~rf~ty~~~~Gl~p~riifs~va~k~ 827 (966)
T KOG4626|consen 756 PEDAVVFCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAV---GE-----QRFRTYAEQLGLEPDRIIFSPVAAKE 827 (966)
T ss_pred CCCeEEEeechhhhcCCHHHHHHHHHHHHhCCcceeEEEecccc---ch-----HHHHHHHHHhCCCccceeeccccchH
Confidence 46789999999999999999999999999999999999864311 11 1221 11 24566665555533
Q ss_pred hh-----hcccccccccccCChhHHHHHHHhCCceecccccccchhhH-HHHHhhhceeeeec
Q 012587 339 EV-----LAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINS-RFVGEVWKLGLDIK 395 (460)
Q Consensus 339 ~i-----l~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na-~~~~e~~G~g~~~~ 395 (460)
+= |..-.+.-..+. |..|.++.|+.|||||.+|...--...| -.+ -.+|+|..+.
T Consensus 828 eHvrr~~LaDv~LDTplcn-GhTTg~dvLw~GvPmVTmpge~lAsrVa~Sll-~~~Gl~hlia 888 (966)
T KOG4626|consen 828 EHVRRGQLADVCLDTPLCN-GHTTGMDVLWAGVPMVTMPGETLASRVAASLL-TALGLGHLIA 888 (966)
T ss_pred HHHHhhhhhhhcccCcCcC-CcccchhhhccCCceeecccHHHHHHHHHHHH-HHcccHHHHh
Confidence 22 222222224444 7889999999999999999754333333 344 3689998663
|
|
| >TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.32 Score=46.96 Aligned_cols=105 Identities=10% Similarity=0.034 Sum_probs=67.3
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhC--CCeEEEEeCccchhHHhhccccccccccCCCCce-EEecCCCCCCCCCCCCC
Q 012587 8 HVAILPLPAVGHVNSMLNLAELLGHA--GIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQ-FKTLTDGLPRDHPRTPD 84 (460)
Q Consensus 8 ~il~~~~~~~Gh~~p~l~La~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 84 (460)
||+|+-....||+.-+.++.++|+++ +.+|++++.+.+.+-+.. .+.++ +..++.... ..
T Consensus 1 rILii~~~~iGD~vl~tp~l~~Lk~~~P~a~I~~l~~~~~~~l~~~-----------~p~vd~vi~~~~~~~------~~ 63 (344)
T TIGR02201 1 RILLIKLRHHGDMLLTTPVISSLKKNYPDAKIDVLLYQETIPILSE-----------NPDINALYGLDRKKA------KA 63 (344)
T ss_pred CEEEEEeccccceeeHHHHHHHHHHHCCCCEEEEEECcChHHHHhc-----------CCCccEEEEeChhhh------cc
Confidence 69999999999999999999999997 899999999665544433 33343 344432100 00
Q ss_pred ChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEE
Q 012587 85 KFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIY 137 (460)
Q Consensus 85 ~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~ 137 (460)
.... +.. ....+.+ ++. .++|++|.-........++...|.|.-.
T Consensus 64 ~~~~-~~~----~~~l~~~-lr~--~~yD~vidl~~~~~s~ll~~l~~a~~ri 108 (344)
T TIGR02201 64 GERK-LAN----QFHLIKV-LRA--NRYDLVVNLTDQWMVAILVKLLNARVKI 108 (344)
T ss_pred hHHH-HHH----HHHHHHH-HHh--CCCCEEEECCcchHHHHHHHhcCCCeEE
Confidence 0110 111 1122222 333 3999999665555677888888999755
|
This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II. |
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.014 Score=48.88 Aligned_cols=95 Identities=14% Similarity=0.077 Sum_probs=45.7
Q ss_pred HHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCCCCChHHHHHHHHhhCcHHH
Q 012587 22 SMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPDKFPELVDSLNCATPPLL 101 (460)
Q Consensus 22 p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 101 (460)
-+..|+++|.++||+|++++........... ..++.+..++...... ...... ....+
T Consensus 6 ~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~-------~~~~~~-----~~~~~ 63 (160)
T PF13579_consen 6 YVRELARALAARGHEVTVVTPQPDPEDDEEE----------EDGVRVHRLPLPRRPW-------PLRLLR-----FLRRL 63 (160)
T ss_dssp HHHHHHHHHHHTT-EEEEEEE---GGG-SEE----------ETTEEEEEE--S-SSS-------GGGHCC-----HHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEecCCCCcccccc----------cCCceEEeccCCccch-------hhhhHH-----HHHHH
Confidence 4678999999999999999974433322111 2346766665211111 000100 11233
Q ss_pred HHHH--HcCCCCccEEEEcCCcc--hHHHHHHHhCCceEEEec
Q 012587 102 KEMV--SDSKSPVNCIITDGYMS--RAIDAAREVGVSIIYFRT 140 (460)
Q Consensus 102 ~~~~--~~~~~~pD~vv~D~~~~--~~~~~A~~lgiP~v~~~~ 140 (460)
..++ +. .+||+|.+..... .+..+....++|+|....
T Consensus 64 ~~~l~~~~--~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h 104 (160)
T PF13579_consen 64 RRLLAARR--ERPDVVHAHSPTAGLVAALARRRRGIPLVVTVH 104 (160)
T ss_dssp HHHCHHCT-----SEEEEEHHHHHHHHHHHHHHHT--EEEE-S
T ss_pred HHHHhhhc--cCCeEEEecccchhHHHHHHHHccCCcEEEEEC
Confidence 4444 34 4999998776432 234434388999988655
|
|
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.18 Score=51.24 Aligned_cols=131 Identities=8% Similarity=0.014 Sum_probs=76.3
Q ss_pred cEEEEEecCcccC-CHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHH---HHhcCCceeeeecCh---Hhh
Q 012587 268 SVIYVSFGSIAVM-SRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELL---EATKERGCIAGWVPQ---EEV 340 (460)
Q Consensus 268 ~~V~vs~GS~~~~-~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~n~~~~~~vp~---~~i 340 (460)
..+++..|.+... ..+.+...+..+.+.+.++++.-. |.. .....+. ++.++++.+..+++. ..+
T Consensus 307 ~~~i~~vgRl~~~KG~d~li~a~~~l~~~~~~lvivG~-------G~~-~~~~~l~~l~~~~~~~V~~~g~~~~~~~~~~ 378 (489)
T PRK14098 307 TPLVGVIINFDDFQGAELLAESLEKLVELDIQLVICGS-------GDK-EYEKRFQDFAEEHPEQVSVQTEFTDAFFHLA 378 (489)
T ss_pred CCEEEEeccccccCcHHHHHHHHHHHHhcCcEEEEEeC-------CCH-HHHHHHHHHHHHCCCCEEEEEecCHHHHHHH
Confidence 3455666766532 334444433344334566655432 111 1112222 234578888888886 467
Q ss_pred hcccccccccccC---Ch-hHHHHHHHhCCceecccccc--cchhhHHHHHhhhceeeeecCCcchHHHHHHHHHHHh
Q 012587 341 LAHSAVGGFLTHC---GW-NSTLESIVAGMPMICWPSFA--DQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMV 412 (460)
Q Consensus 341 l~~~~~~~~I~HG---G~-gs~~eal~~GvP~l~~P~~~--DQ~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~ 412 (460)
++.+++ ++.-. |. .+.+||+++|+|.|+....+ |...+ .. +.-+.|..+ ...+++.|.++|.++++
T Consensus 379 ~a~aDi--~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~--~~-~~~~~G~l~-~~~d~~~la~ai~~~l~ 450 (489)
T PRK14098 379 IAGLDM--LLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEE--VS-EDKGSGFIF-HDYTPEALVAKLGEALA 450 (489)
T ss_pred HHhCCE--EEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeec--CC-CCCCceeEe-CCCCHHHHHHHHHHHHH
Confidence 888887 65422 33 37789999999888876533 32211 11 123677777 55689999999998764
|
|
| >cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS) | Back alignment and domain information |
|---|
Probab=95.71 E-value=1 Score=41.99 Aligned_cols=101 Identities=13% Similarity=0.057 Sum_probs=63.0
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCC--CeEEEEeCccchhHHhhccccccccccCCCCce-EEecCCCCCCCCCCCCC
Q 012587 8 HVAILPLPAVGHVNSMLNLAELLGHAG--IKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQ-FKTLTDGLPRDHPRTPD 84 (460)
Q Consensus 8 ~il~~~~~~~Gh~~p~l~La~~L~~rG--H~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 84 (460)
||+++-..+.|++.-+.++.++|+++. -+|++++.+.+.+.+ +. .+.++ +..++... ...
T Consensus 1 kILii~~~~iGD~i~~~p~l~~Lk~~~P~~~I~~l~~~~~~~l~-~~----------~p~id~v~~~~~~~------~~~ 63 (279)
T cd03789 1 RILVIRLSWIGDVVLATPLLRALKARYPDARITVLAPPWFAPLL-EL----------MPEVDRVIVLPKKH------GKL 63 (279)
T ss_pred CEEEEecccHHHHHHHHHHHHHHHHHCCCCEEEEEEChhhHHHH-hc----------CCccCEEEEcCCcc------ccc
Confidence 689999999999999999999999974 899999996554444 32 22342 33332110 001
Q ss_pred ChHHHHHHHHhhCcHHHHHHHHcC-CCCccEEEEcCCcchHHHHHHHhCCceEE
Q 012587 85 KFPELVDSLNCATPPLLKEMVSDS-KSPVNCIITDGYMSRAIDAAREVGVSIIY 137 (460)
Q Consensus 85 ~~~~~~~~~~~~~~~~l~~~~~~~-~~~pD~vv~D~~~~~~~~~A~~lgiP~v~ 137 (460)
.. ..+..+++.+ ..++|+++.-........++...+++...
T Consensus 64 ~~------------~~~~~~~~~l~~~~~D~vi~~~~~~~~~~~~~~~~~~~~~ 105 (279)
T cd03789 64 GL------------GARRRLARALRRRRYDLAIDLQGSLRSALLPFLAGAPRRI 105 (279)
T ss_pred ch------------HHHHHHHHHHhhcCCCEEEECCCccHHHHHHHHhCCCeEE
Confidence 11 1112222222 23899999776655555566666766654
|
Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.14 Score=51.05 Aligned_cols=121 Identities=14% Similarity=0.185 Sum_probs=83.6
Q ss_pred CCCCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHHH---H---hcCCceeeeecCh
Q 012587 264 QPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLE---A---TKERGCIAGWVPQ 337 (460)
Q Consensus 264 ~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~---~---~~~n~~~~~~vp~ 337 (460)
-++..+||++|+...+..++.+..-...++..+-.++|...++ +...+...+++ + .++++++.+-.|.
T Consensus 426 lp~~avVf~c~~n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~------~~~~~~~~l~~la~~~Gv~~eRL~f~p~~~~ 499 (620)
T COG3914 426 LPEDAVVFCCFNNYFKITPEVFALWMQILSAVPNSVLLLKAGG------DDAEINARLRDLAEREGVDSERLRFLPPAPN 499 (620)
T ss_pred CCCCeEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEecCC------CcHHHHHHHHHHHHHcCCChhheeecCCCCC
Confidence 3467999999999999999999999999999998999988642 12223333332 1 1356777666664
Q ss_pred ---Hhhhccccccccc---ccCChhHHHHHHHhCCceecccccccchh--hHHHHHhhhceeeee
Q 012587 338 ---EEVLAHSAVGGFL---THCGWNSTLESIVAGMPMICWPSFADQQI--NSRFVGEVWKLGLDI 394 (460)
Q Consensus 338 ---~~il~~~~~~~~I---~HGG~gs~~eal~~GvP~l~~P~~~DQ~~--na~~~~e~~G~g~~~ 394 (460)
.+=+..+++ |+ --||..|+.|+|..|||+|..+ ++|+. |+.-++..+|+-..+
T Consensus 500 ~~h~a~~~iADl--vLDTyPY~g~TTa~daLwm~vPVlT~~--G~~FasR~~~si~~~agi~e~v 560 (620)
T COG3914 500 EDHRARYGIADL--VLDTYPYGGHTTASDALWMGVPVLTRV--GEQFASRNGASIATNAGIPELV 560 (620)
T ss_pred HHHHHhhchhhe--eeecccCCCccchHHHHHhcCceeeec--cHHHHHhhhHHHHHhcCCchhh
Confidence 444455665 65 4699999999999999999984 66653 333333444554444
|
|
| >PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.11 Score=45.40 Aligned_cols=120 Identities=13% Similarity=0.122 Sum_probs=63.7
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCC-C-CCCCCC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPR-D-HPRTPD 84 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~ 84 (460)
||||+..=-+. +.--+.+|+++|++.||+|+++.+.....-. |..... ...+++.....+... + ......
T Consensus 1 M~ILlTNDDGi-~a~Gi~aL~~~L~~~g~~V~VvAP~~~~Sg~----g~sit~---~~pl~~~~~~~~~~~~~~~~~~v~ 72 (196)
T PF01975_consen 1 MRILLTNDDGI-DAPGIRALAKALSALGHDVVVVAPDSEQSGT----GHSITL---HKPLRVTEVEPGHDPGGVEAYAVS 72 (196)
T ss_dssp SEEEEE-SS-T-TSHHHHHHHHHHTTTSSEEEEEEESSSTTTS----TTS--S---SSEEEEEEEE-TTCCSTTEEEEES
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhcCCeEEEEeCCCCCcCc----ceeecC---CCCeEEEEEEecccCCCCCEEEEc
Confidence 68888877665 5556889999998889999999986543222 221111 112444333211111 1 001112
Q ss_pred ChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCC----------cc---hHHHHHHHhCCceEEEecch
Q 012587 85 KFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGY----------MS---RAIDAAREVGVSIIYFRTIS 142 (460)
Q Consensus 85 ~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~----------~~---~~~~~A~~lgiP~v~~~~~~ 142 (460)
....-|-.+ .+..++.+ .+||+||+..- +. .+..-|...|||.|.++...
T Consensus 73 GTPaDcv~~------al~~~~~~--~~pDLViSGiN~G~N~g~~v~~SGTVgAA~ea~~~GipaIA~S~~~ 135 (196)
T PF01975_consen 73 GTPADCVKL------ALDGLLPD--KKPDLVISGINHGANLGTDVLYSGTVGAAMEAALRGIPAIAVSLDS 135 (196)
T ss_dssp S-HHHHHHH------HHHCTSTT--SS-SEEEEEEEES---GGGGGG-HHHHHHHHHHHTTSEEEEEEEES
T ss_pred CcHHHHHHH------HHHhhhcc--CCCCEEEECCCCCccCCcCcccccHHHHHHHHHHcCCCeEEEeccc
Confidence 223222222 22333333 26999997532 22 45666778999999988753
|
This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A .... |
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=95.17 E-value=0.8 Score=43.76 Aligned_cols=85 Identities=13% Similarity=-0.016 Sum_probs=56.3
Q ss_pred hcCCceee---eecCh---Hhhhccccccccccc---CC-hhHHHHHHHhCCceecccc------cccc------hhhHH
Q 012587 325 TKERGCIA---GWVPQ---EEVLAHSAVGGFLTH---CG-WNSTLESIVAGMPMICWPS------FADQ------QINSR 382 (460)
Q Consensus 325 ~~~n~~~~---~~vp~---~~il~~~~~~~~I~H---GG-~gs~~eal~~GvP~l~~P~------~~DQ------~~na~ 382 (460)
.++++.+. +++++ ..+++.+++ +|.- =| ..++.||+++|+|+|..-. .+|+ .++..
T Consensus 199 l~~~V~f~g~~G~~~~~dl~~~y~~aDi--fV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~ 276 (335)
T PHA01633 199 VPANVHFVAEFGHNSREYIFAFYGAMDF--TIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVE 276 (335)
T ss_pred CCCcEEEEecCCCCCHHHHHHHHHhCCE--EEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHH
Confidence 45678877 45554 466788887 6643 34 3578999999999988633 2232 23333
Q ss_pred HHHh-hhceeeeecCCcchHHHHHHHHHHHh
Q 012587 383 FVGE-VWKLGLDIKDLCDRNIVEKAVNDLMV 412 (460)
Q Consensus 383 ~~~e-~~G~g~~~~~~~~~~~l~~~i~~~l~ 412 (460)
...+ ..|.|..+ ...+++++.+++.++++
T Consensus 277 ~~~~~~~g~g~~~-~~~d~~~la~ai~~~~~ 306 (335)
T PHA01633 277 EYYDKEHGQKWKI-HKFQIEDMANAIILAFE 306 (335)
T ss_pred HhcCcccCceeee-cCCCHHHHHHHHHHHHh
Confidence 2221 23666666 56899999999999965
|
|
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.31 Score=36.65 Aligned_cols=64 Identities=16% Similarity=0.095 Sum_probs=44.0
Q ss_pred cCChhHHHHHHHhCCceecccccccchhhHHHHHhhhc-eeeeecCCcchHHHHHHHHHHHhHhHHHHHHHHHHHH
Q 012587 352 HCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWK-LGLDIKDLCDRNIVEKAVNDLMVERKEEFMESADRMA 426 (460)
Q Consensus 352 HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G-~g~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~ 426 (460)
+|-..-+.|++++|+|+|.-.. ......+ +. | -++.. . +.+++.+.+.++++| +..+++..+-+
T Consensus 9 ~~~~~r~~E~~a~G~~vi~~~~----~~~~~~~-~~-~~~~~~~-~--~~~el~~~i~~ll~~--~~~~~~ia~~a 73 (92)
T PF13524_consen 9 DGPNMRIFEAMACGTPVISDDS----PGLREIF-ED-GEHIITY-N--DPEELAEKIEYLLEN--PEERRRIAKNA 73 (92)
T ss_pred CCCchHHHHHHHCCCeEEECCh----HHHHHHc-CC-CCeEEEE-C--CHHHHHHHHHHHHCC--HHHHHHHHHHH
Confidence 4556789999999999998864 3333334 22 4 34444 2 999999999999998 65554444333
|
|
| >PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [] | Back alignment and domain information |
|---|
Probab=93.41 E-value=0.48 Score=40.46 Aligned_cols=116 Identities=16% Similarity=0.166 Sum_probs=62.9
Q ss_pred EcCCCCCCHHHHHHHHHHH-HhC-CCeEEEEeCccchhH--HhhccccccccccCCCCceEEecCCCCCCCCCCCCCChH
Q 012587 12 LPLPAVGHVNSMLNLAELL-GHA-GIKITFLNTEHYYDR--VIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPDKFP 87 (460)
Q Consensus 12 ~~~~~~Gh~~p~l~La~~L-~~r-GH~Vt~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (460)
+..++.||..=++.|.+.+ .++ .++..+++..+.... +.+ ..... .....+..+|...... +...
T Consensus 3 ~v~gsGGHt~eml~L~~~~~~~~~~~~~~ivt~~d~~S~~k~~~-~~~~~-----~~~~~~~~~~r~r~v~-----q~~~ 71 (170)
T PF08660_consen 3 VVLGSGGHTAEMLRLLKALDNDRYQPRTYIVTEGDKQSRSKAEQ-LEKSS-----SKRHKILEIPRAREVG-----QSYL 71 (170)
T ss_pred EEEcCcHHHHHHHHHHHHhhhhcCCCcEEEEEcCCcccHHHHHH-HHHhc-----cccceeeccceEEEec-----hhhH
Confidence 3456679999999999999 333 566666665333221 111 11000 0001233333211111 1111
Q ss_pred HHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcc--hHHHHHHHh------CCceEEEecc
Q 012587 88 ELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS--RAIDAAREV------GVSIIYFRTI 141 (460)
Q Consensus 88 ~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~--~~~~~A~~l------giP~v~~~~~ 141 (460)
.............+.-+.++ +||+||+..-.. ..+.+|..+ |.+.|.+.+.
T Consensus 72 ~~~~~~l~~~~~~~~il~r~---rPdvii~nGpg~~vp~~~~~~l~~~~~~~~~kiIyIES~ 130 (170)
T PF08660_consen 72 TSIFTTLRAFLQSLRILRRE---RPDVIISNGPGTCVPVCLAAKLLRLLGLRGSKIIYIESF 130 (170)
T ss_pred hhHHHHHHHHHHHHHHHHHh---CCCEEEEcCCceeeHHHHHHHHHHHhhccCCcEEEEEee
Confidence 11122222233444555555 999999887655 578889999 9999998776
|
|
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=93.08 E-value=4.5 Score=38.77 Aligned_cols=78 Identities=9% Similarity=0.136 Sum_probs=45.8
Q ss_pred eecChHh---hhccccccccccc-CC-hhHHHHHHHhCCceecccccc--cchh---hHHHHHhh-----------hcee
Q 012587 333 GWVPQEE---VLAHSAVGGFLTH-CG-WNSTLESIVAGMPMICWPSFA--DQQI---NSRFVGEV-----------WKLG 391 (460)
Q Consensus 333 ~~vp~~~---il~~~~~~~~I~H-GG-~gs~~eal~~GvP~l~~P~~~--DQ~~---na~~~~e~-----------~G~g 391 (460)
.++|+.+ +++.+++-++-++ .| ..++.||+++|+|+|+.-..+ |... |+-.+ +. .++|
T Consensus 196 ~~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv-~~~~~~~~~~~~~~~~G 274 (331)
T PHA01630 196 TPLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWI-KSGRKPKLWYTNPIHVG 274 (331)
T ss_pred ccCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEe-eecccccccccCCcccc
Confidence 3477544 5788888222233 33 458999999999999976543 3222 22111 10 1345
Q ss_pred eeecCCcchHHHHHHHHHHHhH
Q 012587 392 LDIKDLCDRNIVEKAVNDLMVE 413 (460)
Q Consensus 392 ~~~~~~~~~~~l~~~i~~~l~~ 413 (460)
..++ .+.+++.+.+.++|.|
T Consensus 275 ~~v~--~~~~~~~~~ii~~l~~ 294 (331)
T PHA01630 275 YFLD--PDIEDAYQKLLEALAN 294 (331)
T ss_pred cccC--CCHHHHHHHHHHHHhC
Confidence 5442 3667777778787774
|
|
| >PRK13932 stationary phase survival protein SurE; Provisional | Back alignment and domain information |
|---|
Probab=92.38 E-value=2.7 Score=38.31 Aligned_cols=117 Identities=13% Similarity=0.105 Sum_probs=63.6
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCC-CCC
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHP-RTP 83 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 83 (460)
++||||+..=-+. |.--+.+|+++|++.| +|+++.+....... |..... ...+++..+.. ..... ...
T Consensus 4 ~~M~ILltNDDGi-~a~Gi~aL~~~l~~~g-~V~VvAP~~~~Sg~----g~ait~---~~pl~~~~~~~--~~~~~~y~v 72 (257)
T PRK13932 4 KKPHILVCNDDGI-EGEGIHVLAASMKKIG-RVTVVAPAEPHSGM----SHAMTL---GVPLRIKEYQK--NNRFFGYTV 72 (257)
T ss_pred CCCEEEEECCCCC-CCHHHHHHHHHHHhCC-CEEEEcCCCCCCCC----cccccC---CCCeEEEEEcc--CCCceEEEE
Confidence 3469887765432 3345778999999888 79988875532211 222222 22355554431 10100 011
Q ss_pred CChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCC-------------cchHHHHHHHhCCceEEEecc
Q 012587 84 DKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGY-------------MSRAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~-------------~~~~~~~A~~lgiP~v~~~~~ 141 (460)
.....-|-.+ .+..++.+ +||+||+... +..+..-|..+|||.|.++..
T Consensus 73 ~GTPaDCV~l------al~~~~~~---~pDLVvSGIN~G~N~G~dv~ySGTVgAA~Ea~~~GiPsIA~S~~ 134 (257)
T PRK13932 73 SGTPVDCIKV------ALSHILPE---KPDLIVSGINYGSNTATNTLYSGTVAAALEGAIQGIPSLAFSLT 134 (257)
T ss_pred cCcHHHHHHH------HHHhhcCC---CCCEEEECCcCCCCCCcCEecchhHHHHHHHHHcCCCeEEEEcc
Confidence 2223333222 22334433 8999987543 225666778899999998763
|
|
| >PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
Probab=92.27 E-value=5.6 Score=37.68 Aligned_cols=58 Identities=16% Similarity=0.036 Sum_probs=41.4
Q ss_pred cChHhhhcccccccccccCChhHHHHHHHhCCceecccccccchh-hH---HHHHhhhceeeeec
Q 012587 335 VPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQI-NS---RFVGEVWKLGLDIK 395 (460)
Q Consensus 335 vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~-na---~~~~e~~G~g~~~~ 395 (460)
=|+..+|..++. ++||---.+=+.||+..|+|+.+++... +.. .. +.+ ++.|.-..+.
T Consensus 220 nPy~~~La~ad~-i~VT~DSvSMvsEA~~tG~pV~v~~l~~-~~~r~~r~~~~L-~~~g~~r~~~ 281 (311)
T PF06258_consen 220 NPYLGFLAAADA-IVVTEDSVSMVSEAAATGKPVYVLPLPG-RSGRFRRFHQSL-EERGAVRPFT 281 (311)
T ss_pred CcHHHHHHhCCE-EEEcCccHHHHHHHHHcCCCEEEecCCC-cchHHHHHHHHH-HHCCCEEECC
Confidence 368899999997 5666666688899999999999999876 221 11 234 3457766664
|
The function of this family is unknown. |
| >COG0496 SurE Predicted acid phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.95 E-value=2.4 Score=38.32 Aligned_cols=113 Identities=12% Similarity=0.112 Sum_probs=63.8
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCCCCCh
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPDKF 86 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (460)
||||+..=-+ =|.--+.+|+++|+ .+++|+++.+.....-.... ... ...++...+.. ... .....
T Consensus 1 mrILlTNDDG-i~a~Gi~aL~~al~-~~~dV~VVAP~~~qSg~s~s----lTl---~~Plr~~~~~~----~~~-av~GT 66 (252)
T COG0496 1 MRILLTNDDG-IHAPGIRALARALR-EGADVTVVAPDREQSGASHS----LTL---HEPLRVRQVDN----GAY-AVNGT 66 (252)
T ss_pred CeEEEecCCc-cCCHHHHHHHHHHh-hCCCEEEEccCCCCcccccc----ccc---ccCceeeEecc----ceE-EecCC
Confidence 4676655433 34445778899999 99999999986643332221 111 11233333322 111 11122
Q ss_pred HHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCC-------------cchHHHHHHHhCCceEEEecc
Q 012587 87 PELVDSLNCATPPLLKEMVSDSKSPVNCIITDGY-------------MSRAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 87 ~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~-------------~~~~~~~A~~lgiP~v~~~~~ 141 (460)
..-|-. -.+..++++. +||+||+... +.+|.+=|..+|||.|.++..
T Consensus 67 PaDCV~------lal~~l~~~~--~pDLVvSGIN~G~Nlg~dv~ySGTVaaA~Ea~~~GipsIA~S~~ 126 (252)
T COG0496 67 PADCVI------LGLNELLKEP--RPDLVVSGINAGANLGDDVIYSGTVAAAMEAALLGIPAIAISLA 126 (252)
T ss_pred hHHHHH------HHHHHhccCC--CCCEEEeCccCCCccccceeeeehHHHHHHHHHcCccceeeeeh
Confidence 222222 2346667664 6999987543 224666678999999998775
|
|
| >PRK13933 stationary phase survival protein SurE; Provisional | Back alignment and domain information |
|---|
Probab=91.68 E-value=3.6 Score=37.48 Aligned_cols=116 Identities=15% Similarity=0.149 Sum_probs=61.0
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecC-CCCCCCCCCCCCC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLT-DGLPRDHPRTPDK 85 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 85 (460)
||||+..=-+. |.--+.+|+++|++ +|+|+++.+.....-. |..... ...++...+. ++.....+ ....
T Consensus 1 M~ILvtNDDGi-~apGl~aL~~~l~~-~~~V~VvAP~~~~Sg~----g~sit~---~~pl~~~~~~~~~~~~~~~-~v~G 70 (253)
T PRK13933 1 MNILLTNDDGI-NAEGINTLAELLSK-YHEVIIVAPENQRSAS----SHSITI---YEPIIIKEVKLEGINSKAY-SISG 70 (253)
T ss_pred CeEEEEcCCCC-CChhHHHHHHHHHh-CCcEEEEccCCCCccc----cccccC---CCCeEEEeeccCCCCccEE-EECC
Confidence 47777665433 33337889999975 6899999875542221 222222 2224444332 10000000 1122
Q ss_pred hHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCC----------cc---hHHHHHHHhCCceEEEecc
Q 012587 86 FPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGY----------MS---RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 86 ~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~----------~~---~~~~~A~~lgiP~v~~~~~ 141 (460)
...-|-.+ .+..++. .+||+||+..- ++ .+..-|..+|||.|.++..
T Consensus 71 TPaDcV~l------al~~l~~---~~pDLVvSGIN~G~N~g~dv~ySGTVgAA~ea~~~GiPsiA~S~~ 130 (253)
T PRK13933 71 TPADCVRV------ALDKLVP---DNIDMVISGINKGLNIGNDILYSGTVSAAIEGAIYKVPSIAVSAD 130 (253)
T ss_pred cHHHHHHH------HHHHhcC---CCCCEEEECCcCCCCCCcCCccchhHHHHHHHHHcCCCeEEEEec
Confidence 22222222 1233443 38999987532 22 5667778999999998763
|
|
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=91.39 E-value=6.4 Score=42.79 Aligned_cols=84 Identities=11% Similarity=0.023 Sum_probs=55.4
Q ss_pred cCCceeeeecChH---hhhccccccccccc---CC-hhHHHHHHHhCCceecccccc--cchhh--HHHHHhhhceeeee
Q 012587 326 KERGCIAGWVPQE---EVLAHSAVGGFLTH---CG-WNSTLESIVAGMPMICWPSFA--DQQIN--SRFVGEVWKLGLDI 394 (460)
Q Consensus 326 ~~n~~~~~~vp~~---~il~~~~~~~~I~H---GG-~gs~~eal~~GvP~l~~P~~~--DQ~~n--a~~~~e~~G~g~~~ 394 (460)
.+++.+..+.+.. .+++.+++ ||.- =| ..+.+||+++|+|.|+....+ |-..+ ...+.+.-+.|..+
T Consensus 836 ~drV~FlG~~de~lah~IYAaADI--FLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf 913 (977)
T PLN02939 836 NNNIRLILKYDEALSHSIYAASDM--FIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTF 913 (977)
T ss_pred CCeEEEEeccCHHHHHHHHHhCCE--EEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEe
Confidence 3578887887764 58889997 6642 23 348999999999999876543 32211 11111123567776
Q ss_pred cCCcchHHHHHHHHHHHh
Q 012587 395 KDLCDRNIVEKAVNDLMV 412 (460)
Q Consensus 395 ~~~~~~~~l~~~i~~~l~ 412 (460)
...+++.|..++.++++
T Consensus 914 -~~~D~eaLa~AL~rAL~ 930 (977)
T PLN02939 914 -LTPDEQGLNSALERAFN 930 (977)
T ss_pred -cCCCHHHHHHHHHHHHH
Confidence 44688889999988875
|
|
| >cd02067 B12-binding B12 binding domain (B12-BD) | Back alignment and domain information |
|---|
Probab=91.31 E-value=1.9 Score=34.27 Aligned_cols=44 Identities=20% Similarity=0.225 Sum_probs=37.1
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhh
Q 012587 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIR 51 (460)
Q Consensus 8 ~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~ 51 (460)
||++.+.++..|.....-++..|.++|++|.++...-..+.+.+
T Consensus 1 ~vl~~~~~~e~H~lG~~~~~~~l~~~G~~V~~lg~~~~~~~l~~ 44 (119)
T cd02067 1 KVVIATVGGDGHDIGKNIVARALRDAGFEVIDLGVDVPPEEIVE 44 (119)
T ss_pred CEEEEeeCCchhhHHHHHHHHHHHHCCCEEEECCCCCCHHHHHH
Confidence 68999999999999999999999999999999876444444444
|
This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins. |
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=91.28 E-value=1 Score=37.97 Aligned_cols=28 Identities=29% Similarity=0.381 Sum_probs=22.4
Q ss_pred CCCCHHHHHHHHHHHHhCCCeEEEEeCc
Q 012587 16 AVGHVNSMLNLAELLGHAGIKITFLNTE 43 (460)
Q Consensus 16 ~~Gh~~p~l~La~~L~~rGH~Vt~~~~~ 43 (460)
..|=-.-+..|+++|+++||+|++++..
T Consensus 11 ~GG~e~~~~~l~~~l~~~G~~v~v~~~~ 38 (177)
T PF13439_consen 11 IGGAERVVLNLARALAKRGHEVTVVSPG 38 (177)
T ss_dssp SSHHHHHHHHHHHHHHHTT-EEEEEESS
T ss_pred CChHHHHHHHHHHHHHHCCCEEEEEEcC
Confidence 4455566889999999999999999873
|
|
| >PRK02261 methylaspartate mutase subunit S; Provisional | Back alignment and domain information |
|---|
Probab=90.94 E-value=0.6 Score=38.24 Aligned_cols=50 Identities=18% Similarity=0.113 Sum_probs=42.6
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhcc
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHS 53 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~ 53 (460)
|+..||++.+.++.+|-.-..-++..|.++|++|++++..-..+.+.+..
T Consensus 1 ~~~~~vl~~~~~gD~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a 50 (137)
T PRK02261 1 MKKKTVVLGVIGADCHAVGNKILDRALTEAGFEVINLGVMTSQEEFIDAA 50 (137)
T ss_pred CCCCEEEEEeCCCChhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHH
Confidence 45679999999999999999999999999999999999755556665543
|
|
| >TIGR00087 surE 5'/3'-nucleotidase SurE | Back alignment and domain information |
|---|
Probab=90.90 E-value=3.8 Score=37.21 Aligned_cols=116 Identities=14% Similarity=0.090 Sum_probs=61.5
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCCCCCh
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPDKF 86 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (460)
||||+.-=-+ =|.--+.+|+++|++.| +|+++.+.....-.. ..... ...+++..++..-.. ........
T Consensus 1 M~ILltNDDG-i~a~Gi~aL~~~l~~~g-~V~VvAP~~~~Sg~g----~ait~---~~pl~~~~~~~~~~~-~~~~v~GT 70 (244)
T TIGR00087 1 MKILLTNDDG-IHSPGIRALYQALKELG-EVTVVAPARQRSGTG----HSLTL---FEPLRVGQVKVKNGA-HIYAVDGT 70 (244)
T ss_pred CeEEEECCCC-CCCHhHHHHHHHHHhCC-CEEEEeCCCCccccc----cCcCC---CCCeEEEEeccCCCc-cEEEEcCc
Confidence 4777554433 23334778999999998 899998855422221 22221 223555554310000 00111222
Q ss_pred HHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCC-------------cchHHHHHHHhCCceEEEecc
Q 012587 87 PELVDSLNCATPPLLKEMVSDSKSPVNCIITDGY-------------MSRAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 87 ~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~-------------~~~~~~~A~~lgiP~v~~~~~ 141 (460)
..-|-.+. +..++.+ +||+||+..- +..+..-|..+|||.|.++..
T Consensus 71 PaDcv~~g------l~~l~~~---~pDLVvSGiN~G~N~g~~v~ySGTVgAA~ea~~~GipaiA~S~~ 129 (244)
T TIGR00087 71 PTDCVILG------INELMPE---VPDLVISGINAGENLGTDVTYSGTVGAAMEAAIHGVPAIAISLQ 129 (244)
T ss_pred HHHHHHHH------HHHhccC---CCCeEEeccccCCCCCccEecchhHHHHHHHHHcCCCeEEEEec
Confidence 22232222 2333333 7999987543 125667778899999998763
|
E. coli SurE is Recommended cutoffs are 15 for homology, 40 for probable orthology, and 200 for orthology with full-length homology. |
| >PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria | Back alignment and domain information |
|---|
Probab=90.85 E-value=2 Score=36.61 Aligned_cols=94 Identities=12% Similarity=0.103 Sum_probs=53.2
Q ss_pred hCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCC--CCCCCCCCCChHHHHHHHHhhCcHHHHHHHHcCC
Q 012587 32 HAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGL--PRDHPRTPDKFPELVDSLNCATPPLLKEMVSDSK 109 (460)
Q Consensus 32 ~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 109 (460)
++||+|+|+|.... .... ++++...+...- .++......++......-. .+...+.++-++ +
T Consensus 1 q~gh~v~fl~~~~~-~~~~-------------~GV~~~~y~~~~~~~~~~~~~~~~~e~~~~rg~-av~~a~~~L~~~-G 64 (171)
T PF12000_consen 1 QRGHEVVFLTERKR-PPIP-------------PGVRVVRYRPPRGPTPGTHPYVRDFEAAVLRGQ-AVARAARQLRAQ-G 64 (171)
T ss_pred CCCCEEEEEecCCC-CCCC-------------CCcEEEEeCCCCCCCCCCCcccccHHHHHHHHH-HHHHHHHHHHHc-C
Confidence 57999999995332 2221 146666554311 1111111222222222111 133444554444 5
Q ss_pred CCccEEEEcCCcchHHHHHHHh-CCceEEEecc
Q 012587 110 SPVNCIITDGYMSRAIDAAREV-GVSIIYFRTI 141 (460)
Q Consensus 110 ~~pD~vv~D~~~~~~~~~A~~l-giP~v~~~~~ 141 (460)
..||+|+.......+..+-+.+ ++|.+...-.
T Consensus 65 f~PDvI~~H~GWGe~Lflkdv~P~a~li~Y~E~ 97 (171)
T PF12000_consen 65 FVPDVIIAHPGWGETLFLKDVFPDAPLIGYFEF 97 (171)
T ss_pred CCCCEEEEcCCcchhhhHHHhCCCCcEEEEEEE
Confidence 6999999997766788899999 8999886654
|
This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important. |
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=90.68 E-value=2 Score=43.18 Aligned_cols=103 Identities=17% Similarity=0.106 Sum_probs=65.2
Q ss_pred eecChHh---hhcccccccccc---cCCh-hHHHHHHHhCCc----eecccccccchhhHHHHHhhhceeeeecCCcchH
Q 012587 333 GWVPQEE---VLAHSAVGGFLT---HCGW-NSTLESIVAGMP----MICWPSFADQQINSRFVGEVWKLGLDIKDLCDRN 401 (460)
Q Consensus 333 ~~vp~~~---il~~~~~~~~I~---HGG~-gs~~eal~~GvP----~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~~~ 401 (460)
..+++.+ ++..+++ ++. +=|. .++.||+++|+| +|+--+.+- +..+ +-|..+ ...+.+
T Consensus 342 ~~~~~~el~aly~aaDv--~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~----~~~l----~~gllV-nP~d~~ 410 (456)
T TIGR02400 342 RSYDREELMALYRAADV--GLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGA----AQEL----NGALLV-NPYDID 410 (456)
T ss_pred CCCCHHHHHHHHHhCcE--EEECccccccCccHHHHHHhcCCCCceEEEeCCCCC----hHHh----CCcEEE-CCCCHH
Confidence 4566654 4678887 554 3465 488899999999 665544331 2222 345555 557899
Q ss_pred HHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHH
Q 012587 402 IVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIK 451 (460)
Q Consensus 402 ~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~ 451 (460)
.++++|.++|+....+-+++.+++.+.+.+ -+...-+++++++|.
T Consensus 411 ~lA~aI~~aL~~~~~er~~r~~~~~~~v~~-----~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 411 GMADAIARALTMPLEEREERHRAMMDKLRK-----NDVQRWREDFLSDLN 455 (456)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHhh-----CCHHHHHHHHHHHhh
Confidence 999999999983224555666666666554 333445667776653
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=90.55 E-value=2.4 Score=38.82 Aligned_cols=92 Identities=17% Similarity=0.228 Sum_probs=56.1
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCCCCCh
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPDKF 86 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (460)
|||+++..- | . -..|++.|.++||+|+..+............+ ...+. ...+
T Consensus 1 m~ILvlGGT--~--e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~g----------~~~v~--~g~l----------- 52 (256)
T TIGR00715 1 MTVLLMGGT--V--D-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIHQ----------ALTVH--TGAL----------- 52 (256)
T ss_pred CeEEEEech--H--H-HHHHHHHHHhCCCeEEEEEccCCccccccccC----------CceEE--ECCC-----------
Confidence 466665432 2 2 67899999999999999886443222211111 01110 0000
Q ss_pred HHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcc------hHHHHHHHhCCceEEE
Q 012587 87 PELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS------RAIDAAREVGVSIIYF 138 (460)
Q Consensus 87 ~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~------~~~~~A~~lgiP~v~~ 138 (460)
....+.+++++. ++|+||--++-+ -+..+|+.+|||++.+
T Consensus 53 ----------~~~~l~~~l~~~--~i~~VIDAtHPfA~~is~~a~~a~~~~~ipylR~ 98 (256)
T TIGR00715 53 ----------DPQELREFLKRH--SIDILVDATHPFAAQITTNATAVCKELGIPYVRF 98 (256)
T ss_pred ----------CHHHHHHHHHhc--CCCEEEEcCCHHHHHHHHHHHHHHHHhCCcEEEE
Confidence 123466777775 899888665544 3678899999999996
|
This enzyme was found to be a monomer by gel filtration. |
| >PF02951 GSH-S_N: Prokaryotic glutathione synthetase, N-terminal domain; InterPro: IPR004215 Prokaryotic glutathione synthetase 6 | Back alignment and domain information |
|---|
Probab=89.96 E-value=0.51 Score=37.47 Aligned_cols=38 Identities=11% Similarity=0.160 Sum_probs=27.7
Q ss_pred cEEEEEcCCCCC---CHHHHHHHHHHHHhCCCeEEEEeCcc
Q 012587 7 VHVAILPLPAVG---HVNSMLNLAELLGHAGIKITFLNTEH 44 (460)
Q Consensus 7 ~~il~~~~~~~G---h~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (460)
|||+|+.-|-.+ .-.-+++|+.+-.+|||+|.++....
T Consensus 1 Mki~fvmDpi~~i~~~kDTT~alm~eAq~RGhev~~~~~~d 41 (119)
T PF02951_consen 1 MKIAFVMDPIESIKPYKDTTFALMLEAQRRGHEVFYYEPGD 41 (119)
T ss_dssp -EEEEEES-GGG--TTT-HHHHHHHHHHHTT-EEEEE-GGG
T ss_pred CeEEEEeCCHHHCCCCCChHHHHHHHHHHCCCEEEEEEcCc
Confidence 689999888644 34678999999999999999998744
|
3.2.3 from EC (glutathione synthase) catalyses the conversion of gamma-L-glutamyl-L-cysteine and glycine to orthophosphate and glutathione in the presence of ATP. This is the second step in glutathione biosynthesis. The enzyme is inhibited by 7,8-dihydrofolate, methotrexate and trimethoprim. This domain is the N terminus of the enzyme.; GO: 0004363 glutathione synthase activity, 0006750 glutathione biosynthetic process; PDB: 1GLV_A 1GSA_A 1GSH_A 2GLT_A. |
| >PRK00346 surE 5'(3')-nucleotidase/polyphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=89.85 E-value=6.5 Score=35.79 Aligned_cols=112 Identities=13% Similarity=0.163 Sum_probs=61.8
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCCCCCh
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPDKF 86 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (460)
||||+..=-+. |.--+.+|+++|++. |+|+++.+.....-. |..... ...+++..+..+ .......
T Consensus 1 M~ILlTNDDGi-~a~Gi~aL~~~l~~~-~~V~VvAP~~~qSg~----g~ait~---~~pl~~~~~~~~-----~~~v~GT 66 (250)
T PRK00346 1 MRILLTNDDGI-HAPGIRALAEALREL-ADVTVVAPDRERSGA----SHSLTL---TRPLRVEKVDNG-----FYAVDGT 66 (250)
T ss_pred CeEEEECCCCC-CChhHHHHHHHHHhC-CCEEEEeCCCCCcCC----cccccC---CCCeEEEEecCC-----eEEECCc
Confidence 47776655443 344478899999998 799999885532222 222221 222444444211 1112222
Q ss_pred HHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCC----------c---chHHHHHHHhCCceEEEecc
Q 012587 87 PELVDSLNCATPPLLKEMVSDSKSPVNCIITDGY----------M---SRAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 87 ~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~----------~---~~~~~~A~~lgiP~v~~~~~ 141 (460)
..-|-.+ .+..++.+ +||+||+..- + ..+..-|...|||.|.++..
T Consensus 67 PaDcV~~------gl~~l~~~---~pDlVvSGIN~G~N~g~~v~ySGTVgAA~ea~~~GiPaiA~S~~ 125 (250)
T PRK00346 67 PTDCVHL------ALNGLLDP---KPDLVVSGINHGANLGDDVLYSGTVAAAMEGALLGIPAIAVSLA 125 (250)
T ss_pred HHHHHHH------HHHhhccC---CCCEEEeCCccCCCCCCCeeccHHHHHHHHHHhcCCCeEEEecc
Confidence 2222222 22333433 8999987543 1 24666677899999998763
|
|
| >PRK13935 stationary phase survival protein SurE; Provisional | Back alignment and domain information |
|---|
Probab=89.23 E-value=7.5 Score=35.43 Aligned_cols=115 Identities=12% Similarity=0.098 Sum_probs=60.5
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCC-CCCCCC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDH-PRTPDK 85 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 85 (460)
||||+..=-+. |.--+.+|+++|++ +|+|+++.+.....-. |..... ...+.+..+.. ..+. ......
T Consensus 1 M~ILlTNDDGi-~a~Gi~aL~~~l~~-~~~V~VvAP~~~qSg~----g~ait~---~~pl~~~~~~~--~~~~~~y~v~G 69 (253)
T PRK13935 1 MNILVTNDDGI-TSPGIIILAEYLSE-KHEVFVVAPDKERSAT----GHAITI---RVPLWAKKVFI--SERFVAYATTG 69 (253)
T ss_pred CeEEEECCCCC-CCHHHHHHHHHHHh-CCcEEEEccCCCCccc----cccccC---CCCceEEEeec--CCCccEEEECC
Confidence 47777665543 34447788999975 6899999885542222 221111 11234333321 0010 001122
Q ss_pred hHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCC----------cc---hHHHHHHHhCCceEEEecc
Q 012587 86 FPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGY----------MS---RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 86 ~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~----------~~---~~~~~A~~lgiP~v~~~~~ 141 (460)
...-|-.+. +..++.+ +||+||+... ++ .+..-|..+|||.|.++..
T Consensus 70 TPaDcV~la------l~~~~~~---~pDLVvSGIN~G~N~g~~v~ySGTVgAA~ea~~~GiPaiA~S~~ 129 (253)
T PRK13935 70 TPADCVKLG------YDVIMDK---KVDLVISGINRGPNLGTDVLYSGTVSGALEGAMMGVPSIAISSA 129 (253)
T ss_pred cHHHHHHHH------HHhhccC---CCCEEEeCCccCCCCCcCCcccHhHHHHHHHHhcCCCeEEEEcc
Confidence 222222222 2333433 8999987532 22 4666677899999998863
|
|
| >COG0003 ArsA Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Probab=89.20 E-value=3.6 Score=39.01 Aligned_cols=39 Identities=18% Similarity=0.246 Sum_probs=33.7
Q ss_pred CcEEEEEcC-CCCCCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 012587 6 HVHVAILPL-PAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (460)
Q Consensus 6 ~~~il~~~~-~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (460)
++||+|++. |+-|-..-.-++|-.|++.|.+|.+++++.
T Consensus 1 ~~riv~f~GKGGVGKTT~aaA~A~~lA~~g~kvLlvStDP 40 (322)
T COG0003 1 MTRIVFFTGKGGVGKTTIAAATAVKLAESGKKVLLVSTDP 40 (322)
T ss_pred CcEEEEEecCCcccHHHHHHHHHHHHHHcCCcEEEEEeCC
Confidence 468988888 799998889999999999999988887644
|
|
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=88.70 E-value=8.2 Score=39.19 Aligned_cols=85 Identities=11% Similarity=0.138 Sum_probs=47.5
Q ss_pred cCCc-eeeeecCh-Hhhh-cccccccccc---cCChh-HHHHHHHhCCceecccccc--cchhhHHHHHhh--hceeeee
Q 012587 326 KERG-CIAGWVPQ-EEVL-AHSAVGGFLT---HCGWN-STLESIVAGMPMICWPSFA--DQQINSRFVGEV--WKLGLDI 394 (460)
Q Consensus 326 ~~n~-~~~~~vp~-~~il-~~~~~~~~I~---HGG~g-s~~eal~~GvP~l~~P~~~--DQ~~na~~~~e~--~G~g~~~ 394 (460)
++++ .+.+|-.. ..++ +.+++ |+. +=|.| +.+||+++|+|.|+....+ |--.......+. -+.|..+
T Consensus 349 ~~~v~~~~G~~~~l~~~~~a~aDi--fv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~ 426 (485)
T PRK14099 349 PGQIGVVIGYDEALAHLIQAGADA--LLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQF 426 (485)
T ss_pred CCCEEEEeCCCHHHHHHHHhcCCE--EEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEe
Confidence 4454 34466332 2223 45676 664 34544 7789999998777654322 322221111011 1467777
Q ss_pred cCCcchHHHHHHHHH---HHhH
Q 012587 395 KDLCDRNIVEKAVND---LMVE 413 (460)
Q Consensus 395 ~~~~~~~~l~~~i~~---~l~~ 413 (460)
...++++|.+++.+ +++|
T Consensus 427 -~~~d~~~La~ai~~a~~l~~d 447 (485)
T PRK14099 427 -SPVTADALAAALRKTAALFAD 447 (485)
T ss_pred -CCCCHHHHHHHHHHHHHHhcC
Confidence 45689999999997 4555
|
|
| >COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=88.26 E-value=3.9 Score=34.20 Aligned_cols=100 Identities=23% Similarity=0.298 Sum_probs=62.4
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCC-----CCC
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPR-----DHP 80 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 80 (460)
+|||++.-.|+.|-.--.+.|++.|.++|++|-=+-+++-. ..|. ..+|.+..+..+-.. +..
T Consensus 5 ~mki~ITG~PGvGKtTl~~ki~e~L~~~g~kvgGf~t~EVR-----~gGk-------R~GF~Ivdl~tg~~~~la~~~~~ 72 (179)
T COG1618 5 AMKIFITGRPGVGKTTLVLKIAEKLREKGYKVGGFITPEVR-----EGGK-------RIGFKIVDLATGEEGILARVGFS 72 (179)
T ss_pred ceEEEEeCCCCccHHHHHHHHHHHHHhcCceeeeEEeeeee-----cCCe-------EeeeEEEEccCCceEEEEEcCCC
Confidence 57999999999999999999999999999998755554532 2221 335777777643211 110
Q ss_pred -CCCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCc
Q 012587 81 -RTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYM 121 (460)
Q Consensus 81 -~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~ 121 (460)
.....+.-..+.+.....+.++..+++ .|+||.|-..
T Consensus 73 ~~rvGkY~V~v~~le~i~~~al~rA~~~----aDvIIIDEIG 110 (179)
T COG1618 73 RPRVGKYGVNVEGLEEIAIPALRRALEE----ADVIIIDEIG 110 (179)
T ss_pred CcccceEEeeHHHHHHHhHHHHHHHhhc----CCEEEEeccc
Confidence 011222233444443344555554433 6999999653
|
|
| >PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases | Back alignment and domain information |
|---|
Probab=88.04 E-value=15 Score=31.83 Aligned_cols=57 Identities=23% Similarity=0.340 Sum_probs=39.0
Q ss_pred CcEEEEEcC---C-CCCCHHHHH-HHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecC
Q 012587 6 HVHVAILPL---P-AVGHVNSML-NLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLT 72 (460)
Q Consensus 6 ~~~il~~~~---~-~~Gh~~p~l-~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (460)
|.||+++-. | -+|=+.-+. .|+..|.++||+|+++|.....+.-... +.+++...+|
T Consensus 1 mkkIaIiGtrGIPa~YGGfET~ve~L~~~l~~~g~~v~Vyc~~~~~~~~~~~----------y~gv~l~~i~ 62 (185)
T PF09314_consen 1 MKKIAIIGTRGIPARYGGFETFVEELAPRLVSKGIDVTVYCRSDYYPYKEFE----------YNGVRLVYIP 62 (185)
T ss_pred CceEEEEeCCCCCcccCcHHHHHHHHHHHHhcCCceEEEEEccCCCCCCCcc----------cCCeEEEEeC
Confidence 457877754 3 367777655 6889999999999999985544322221 5567777776
|
|
| >COG4370 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=87.57 E-value=2 Score=39.54 Aligned_cols=113 Identities=14% Similarity=0.182 Sum_probs=70.6
Q ss_pred cCCceee-eecChHhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhH--HHHHhhhceeeeecCCcchHH
Q 012587 326 KERGCIA-GWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINS--RFVGEVWKLGLDIKDLCDRNI 402 (460)
Q Consensus 326 ~~n~~~~-~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na--~~~~e~~G~g~~~~~~~~~~~ 402 (460)
.+|..+. .|-.+.++|.++++ .|--.|.. +-.++=.|||+|.+|-.+-|+.-+ .|-..-+|+.+.+.+ -++..
T Consensus 293 kdnc~l~lsqqsfadiLH~ada--algmAGTA-tEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~-~~aq~ 368 (412)
T COG4370 293 KDNCSLWLSQQSFADILHAADA--ALGMAGTA-TEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVR-PEAQA 368 (412)
T ss_pred cCceEEEEeHHHHHHHHHHHHH--HHHhccch-HHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecC-Cchhh
Confidence 3566655 77788888888886 66555432 345678999999999999996544 444345677776642 23333
Q ss_pred HHHHHHHHHhHhHHHHHHHHHHH-HHHHHHHhhcCCChHHHHHHHHHHHHh
Q 012587 403 VEKAVNDLMVERKEEFMESADRM-ANLAKKSVNKGGSSYCNLDRLVNDIKM 452 (460)
Q Consensus 403 l~~~i~~~l~~~~~~~~~~a~~l-~~~~~~~~~~~g~~~~~~~~~~~~l~~ 452 (460)
-..+.+++|.| +.+.+++++= ++++-+ -| ++..+.|.+.+
T Consensus 369 a~~~~q~ll~d--p~r~~air~nGqrRiGq----aG----aa~rIAe~l~e 409 (412)
T COG4370 369 AAQAVQELLGD--PQRLTAIRHNGQRRIGQ----AG----AARRIAEELGE 409 (412)
T ss_pred HHHHHHHHhcC--hHHHHHHHhcchhhccC----cc----hHHHHHHHHHH
Confidence 33445559998 8877776632 233332 23 44555555554
|
|
| >COG2894 MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Probab=87.19 E-value=5.7 Score=35.06 Aligned_cols=44 Identities=14% Similarity=0.293 Sum_probs=36.5
Q ss_pred CcEEEEEcCC--CCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHH
Q 012587 6 HVHVAILPLP--AVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRV 49 (460)
Q Consensus 6 ~~~il~~~~~--~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~ 49 (460)
|.+|.+++.| +-|-.--+-+|+.+|+++|++|.++-..--...+
T Consensus 1 M~~iIVvTSGKGGVGKTTttAnig~aLA~~GkKv~liD~DiGLRNL 46 (272)
T COG2894 1 MARIIVVTSGKGGVGKTTTTANIGTALAQLGKKVVLIDFDIGLRNL 46 (272)
T ss_pred CceEEEEecCCCCcCccchhHHHHHHHHHcCCeEEEEecCcCchhh
Confidence 5688888885 8899999999999999999999999764444333
|
|
| >COG0052 RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=86.84 E-value=3.8 Score=36.68 Aligned_cols=35 Identities=11% Similarity=0.219 Sum_probs=26.9
Q ss_pred CCccEEE-EcCCcc-hHHHHHHHhCCceEEEecchhH
Q 012587 110 SPVNCII-TDGYMS-RAIDAAREVGVSIIYFRTISAC 144 (460)
Q Consensus 110 ~~pD~vv-~D~~~~-~~~~~A~~lgiP~v~~~~~~~~ 144 (460)
.-||+++ .|+..- .+..=|.++|||+|.++-+-+.
T Consensus 155 ~~Pd~l~ViDp~~e~iAv~EA~klgIPVvAlvDTn~d 191 (252)
T COG0052 155 GLPDVLFVIDPRKEKIAVKEANKLGIPVVALVDTNCD 191 (252)
T ss_pred CCCCEEEEeCCcHhHHHHHHHHHcCCCEEEEecCCCC
Confidence 3499875 776654 6888899999999998876443
|
|
| >PRK13931 stationary phase survival protein SurE; Provisional | Back alignment and domain information |
|---|
Probab=86.75 E-value=12 Score=34.28 Aligned_cols=113 Identities=12% Similarity=0.063 Sum_probs=59.8
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhC---CCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCCC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHA---GIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTP 83 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~r---GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (460)
||||+.-=-+ =|.--+.+|+++|... |++|+++.+....... |...+. ...+++..+.++ .+ ..
T Consensus 1 M~ILlTNDDG-I~a~Gl~aL~~~l~~~~~~~~~V~VVAP~~eqSg~----ghaiT~---~~pl~~~~~~~~----~y-av 67 (261)
T PRK13931 1 MRILITNDDG-INAPGLEVLEQIATELAGPDGEVWTVAPAFEQSGV----GHCISY---THPMMIAELGPR----RF-AA 67 (261)
T ss_pred CeEEEEcCCC-CCCHhHHHHHHHHHHhccCCCeEEEEeCCCCCCCC----cccccC---CCCeEEEEeCCC----eE-EE
Confidence 3665554332 1333466788888773 4799999875532211 222222 223555554321 11 12
Q ss_pred CChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCC----------cc---hHHHHHHHhCCceEEEec
Q 012587 84 DKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGY----------MS---RAIDAAREVGVSIIYFRT 140 (460)
Q Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~----------~~---~~~~~A~~lgiP~v~~~~ 140 (460)
.....-|-.+. +..++.. .+||+||+..- ++ .+..-|..+|||.|.++.
T Consensus 68 ~GTPaDCV~la------l~~~~~~--~~pDlVvSGIN~G~N~g~~v~ySGTVgAA~Ea~~~GiPsiA~S~ 129 (261)
T PRK13931 68 EGSPADCVLAA------LYDVMKD--APPDLVLSGVNRGNNSAENVLYSGTVGGAMEAALQGLPAIALSQ 129 (261)
T ss_pred cCchHHHHHHH------HHHhcCC--CCCCEEEECCccCCCCCcCcccchhHHHHHHHHhcCCCeEEEEe
Confidence 22232332222 2344432 38999987533 22 466677899999999886
|
|
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=86.53 E-value=12 Score=35.03 Aligned_cols=79 Identities=24% Similarity=0.230 Sum_probs=58.4
Q ss_pred CCceee-eecC---hHhhhccccccccccc--CChhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeec-CCcc
Q 012587 327 ERGCIA-GWVP---QEEVLAHSAVGGFLTH--CGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIK-DLCD 399 (460)
Q Consensus 327 ~n~~~~-~~vp---~~~il~~~~~~~~I~H--GG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~-~~~~ 399 (460)
+|+.+. +++| +..+|+.|+++.|+|+ =|.||+.-.+.+|+|+++-- +-+.|.... | .|+-+-.. +.++
T Consensus 206 ~~~~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi~~G~~v~l~r---~n~fwqdl~-e-~gv~Vlf~~d~L~ 280 (322)
T PRK02797 206 ENFQILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCLLIQLGKPVVLSR---DNPFWQDLT-E-QGLPVLFTGDDLD 280 (322)
T ss_pred ccEEehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHHHHHCCCcEEEec---CCchHHHHH-h-CCCeEEecCCccc
Confidence 688765 7887 5789999999777775 48999999999999999753 345555544 3 58877555 6787
Q ss_pred hHHHHHHHHHH
Q 012587 400 RNIVEKAVNDL 410 (460)
Q Consensus 400 ~~~l~~~i~~~ 410 (460)
...++++=+++
T Consensus 281 ~~~v~e~~rql 291 (322)
T PRK02797 281 EDIVREAQRQL 291 (322)
T ss_pred HHHHHHHHHHH
Confidence 77777654444
|
|
| >PRK13934 stationary phase survival protein SurE; Provisional | Back alignment and domain information |
|---|
Probab=86.07 E-value=13 Score=34.13 Aligned_cols=112 Identities=12% Similarity=0.107 Sum_probs=60.0
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCC-CCCCCCCCCCCC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTD-GLPRDHPRTPDK 85 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 85 (460)
||||+..=-+. |.--+.+|+++|...| +|+++.+.....-. |..... ...+....+.. +. ..+ ....
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~al~~~g-~V~VvAP~~eqSg~----g~aiT~---~~pl~~~~~~~~~~--~~y-~v~G 68 (266)
T PRK13934 1 MKILVTNDDGV-HSPGLRLLYEFVSPLG-EVDVVAPETPKSAT----GLGITL---HKPLRMYEVDLCGF--KVY-ATSG 68 (266)
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhCC-cEEEEccCCCCccc----cccccC---CCCcEEEEeccCCc--ceE-EeCC
Confidence 47776665443 4455889999999888 79998875532222 121111 12244444431 11 001 1222
Q ss_pred hHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcC-----------Ccc---hHHHHHHHhCCceEEEec
Q 012587 86 FPELVDSLNCATPPLLKEMVSDSKSPVNCIITDG-----------YMS---RAIDAAREVGVSIIYFRT 140 (460)
Q Consensus 86 ~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~-----------~~~---~~~~~A~~lgiP~v~~~~ 140 (460)
...-|-.+. +..+ . .+||+||+.. +++ .+..-|..+|||.|.++.
T Consensus 69 TPaDCV~la------l~~l--~--~~pDLViSGIN~G~NlG~d~v~ySGTVgAA~Ea~~~GIPsIAvS~ 127 (266)
T PRK13934 69 TPSDTIYLA------TYGL--G--RKYDLVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPAVAYSA 127 (266)
T ss_pred CHHHHHHHH------HHhc--c--CCCCeEEecCccCCCCCcCcccccHhHHHHHHHHhcCCCEEEEec
Confidence 232333221 1222 2 3899998742 222 456667789999999876
|
|
| >PF02441 Flavoprotein: Flavoprotein; InterPro: IPR003382 This entry contains a diverse range of flavoprotein enzymes, including epidermin biosynthesis protein, EpiD, which has been shown to be a flavoprotein that binds FMN [] | Back alignment and domain information |
|---|
Probab=86.02 E-value=1.1 Score=36.23 Aligned_cols=44 Identities=11% Similarity=0.050 Sum_probs=35.0
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhh
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIR 51 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~ 51 (460)
|||++...|+.+=.. ...+.+.|.++|++|.++.++...+.+..
T Consensus 1 k~i~l~vtGs~~~~~-~~~~l~~L~~~g~~v~vv~S~~A~~~~~~ 44 (129)
T PF02441_consen 1 KRILLGVTGSIAAYK-APDLLRRLKRAGWEVRVVLSPSAERFVTP 44 (129)
T ss_dssp -EEEEEE-SSGGGGG-HHHHHHHHHTTTSEEEEEESHHHHHHSHH
T ss_pred CEEEEEEECHHHHHH-HHHHHHHHhhCCCEEEEEECCcHHHHhhh
Confidence 589999999977777 99999999999999999999665444443
|
This enzyme catalyzes the removal of two reducing equivalents from the cysteine residue of the C-terminal meso-lanthionine of epidermin to form a --C==C-- double bond. This family also includes the B chain of dipicolinate synthase a small polar molecule that accumulates to high concentrations in bacterial endospores, and is thought to play a role in spore heat resistance, or the maintenance of heat resistance []. Dipicolinate synthase catalyses the formation of dipicolinic acid from dihydroxydipicolinic acid. This family also includes phenylacrylic acid decarboxylase 4.1.1 from EC [].; GO: 0003824 catalytic activity; PDB: 3QJG_L 1G63_G 1G5Q_L 1P3Y_1 1QZU_A 1E20_A 1MVN_A 1MVL_A 3ZQU_A 2EJB_A .... |
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=85.26 E-value=2.7 Score=42.38 Aligned_cols=70 Identities=19% Similarity=0.127 Sum_probs=45.3
Q ss_pred eecChHh---hhcccccccccc---cCCh-hHHHHHHHhCCc----eecccccccchhhHHHHHhhhceeeeecCCcchH
Q 012587 333 GWVPQEE---VLAHSAVGGFLT---HCGW-NSTLESIVAGMP----MICWPSFADQQINSRFVGEVWKLGLDIKDLCDRN 401 (460)
Q Consensus 333 ~~vp~~~---il~~~~~~~~I~---HGG~-gs~~eal~~GvP----~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~~~ 401 (460)
+++++.+ ++..+++ +|. +-|. .++.||+++|+| +|+.-..+ .. +...-|..+ ...+.+
T Consensus 347 g~v~~~el~~~y~~aDv--~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G-~~-------~~~~~g~lv-~p~d~~ 415 (460)
T cd03788 347 RSLPREELAALYRAADV--ALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAG-AA-------EELSGALLV-NPYDID 415 (460)
T ss_pred CCCCHHHHHHHHHhccE--EEeCccccccCcccceeEEEecCCCceEEEecccc-ch-------hhcCCCEEE-CCCCHH
Confidence 6777654 4778887 553 3455 477999999999 44432221 11 111234555 456899
Q ss_pred HHHHHHHHHHhH
Q 012587 402 IVEKAVNDLMVE 413 (460)
Q Consensus 402 ~l~~~i~~~l~~ 413 (460)
+++++|.++|++
T Consensus 416 ~la~ai~~~l~~ 427 (460)
T cd03788 416 EVADAIHRALTM 427 (460)
T ss_pred HHHHHHHHHHcC
Confidence 999999999984
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >PF02374 ArsA_ATPase: Anion-transporting ATPase; PDB: 2WOO_A 3IBG_B 3SJA_A 3H84_B 3SJD_A 3ZS9_A 3A37_A 2WOJ_A 3SJC_B 3A36_B | Back alignment and domain information |
|---|
Probab=85.15 E-value=1.3 Score=41.87 Aligned_cols=39 Identities=18% Similarity=0.230 Sum_probs=32.1
Q ss_pred cEEEEEcC-CCCCCHHHHHHHHHHHHhCCCeEEEEeCccc
Q 012587 7 VHVAILPL-PAVGHVNSMLNLAELLGHAGIKITFLNTEHY 45 (460)
Q Consensus 7 ~~il~~~~-~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~ 45 (460)
||++|+.. |+-|-..-..++|..++++|++|.+++++..
T Consensus 1 ~r~~~~~GKGGVGKTT~aaA~A~~~A~~G~rtLlvS~Dpa 40 (305)
T PF02374_consen 1 MRILFFGGKGGVGKTTVAAALALALARRGKRTLLVSTDPA 40 (305)
T ss_dssp -SEEEEEESTTSSHHHHHHHHHHHHHHTTS-EEEEESSTT
T ss_pred CeEEEEecCCCCCcHHHHHHHHHHHhhCCCCeeEeecCCC
Confidence 57777766 7999999999999999999999999998553
|
... |
| >cd01425 RPS2 Ribosomal protein S2 (RPS2), involved in formation of the translation initiation complex, where it might contact the messenger RNA and several components of the ribosome | Back alignment and domain information |
|---|
Probab=84.60 E-value=4.1 Score=35.60 Aligned_cols=114 Identities=15% Similarity=0.132 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCCCCChHHHHHHHHhhCcH
Q 012587 20 VNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPDKFPELVDSLNCATPP 99 (460)
Q Consensus 20 ~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (460)
+.-.+.+.+.+..+|-+|.|+++......+.+.... . ....-+...+..+..............+......
T Consensus 42 L~~A~~~i~~i~~~~g~iLfV~t~~~~~~~v~~~a~-------~--~~~~~i~~rw~~G~LTN~~~~~~~~~~~~~~~~~ 112 (193)
T cd01425 42 LRLALNFIANIAAKGGKILFVGTKPQAQRAVKKFAE-------R--TGSFYVNGRWLGGTLTNWKTIRKSIKRLKKLEKE 112 (193)
T ss_pred HHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHH-------H--cCCeeecCeecCCcCCCHHHHHHHHHHHHHHHHH
Confidence 334445567777789999999986555544333220 0 0111111223333322222222222221111112
Q ss_pred HHHHHHHcC---CCCccEEE-EcCCcc-hHHHHHHHhCCceEEEecch
Q 012587 100 LLKEMVSDS---KSPVNCII-TDGYMS-RAIDAAREVGVSIIYFRTIS 142 (460)
Q Consensus 100 ~l~~~~~~~---~~~pD~vv-~D~~~~-~~~~~A~~lgiP~v~~~~~~ 142 (460)
.++..+... ...||+|| .|...- .+..=|.++|||+|.+..+.
T Consensus 113 ~~~k~~~g~~~~~~~Pdlviv~~~~~~~~ai~Ea~~l~IP~I~i~Dtn 160 (193)
T cd01425 113 KLEKNLGGIKDMFRLPDLVIVLDPRKEHQAIREASKLGIPVIAIVDTN 160 (193)
T ss_pred HHHHhcccccccccCCCEEEEeCCccchHHHHHHHHcCCCEEEEecCC
Confidence 223333333 36899987 444332 67778999999999998764
|
It has been shown that in Escherichia coli RPS2 is essential for the binding of ribosomal protein S1 to the 30s ribosomal subunit. In humans, most likely in all vertebrates, and perhaps in all metazoans, the protein also functions as the 67 kDa laminin receptor (LAMR1 or 67LR), which is formed from a 37 kDa precursor, and is overexpressed in many tumors. 67LR is a cell surface receptor which interacts with a variety of ligands, laminin-1 and others. It is assumed that the ligand interactions are mediated via the conserved C-terminus, which becomes extracellular as the protein undergoes conformational changes which are not well understood. Specifically, a conserved palindromic motif, LMWWML, may participate in the interactions. 67LR plays essential roles in the adhesion of cells to the basement membrane an |
| >cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins | Back alignment and domain information |
|---|
Probab=83.85 E-value=5.6 Score=35.00 Aligned_cols=47 Identities=15% Similarity=0.068 Sum_probs=39.8
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhc
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRH 52 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~ 52 (460)
..||++.+.++..|-....-++..|.++|++|++++..-..+.+.+.
T Consensus 82 ~~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~ 128 (201)
T cd02070 82 KGKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEA 128 (201)
T ss_pred CCeEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHH
Confidence 46999999999999999999999999999999998865555555544
|
A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases. |
| >PRK05647 purN phosphoribosylglycinamide formyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=83.57 E-value=6.3 Score=34.65 Aligned_cols=105 Identities=10% Similarity=0.046 Sum_probs=54.5
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCC--CeEEEEeCcc-chh--HHhhccccccccccCCCCceEEecCCCCCCCCC
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAG--IKITFLNTEH-YYD--RVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHP 80 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rG--H~Vt~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (460)
||||+|++.|...-+. +|.+++.+.+ ++|.++.+.. ... ...+.. ++.+..++.....
T Consensus 1 m~ki~vl~sg~gs~~~---~ll~~~~~~~~~~~I~~vvs~~~~~~~~~~a~~~-----------gIp~~~~~~~~~~--- 63 (200)
T PRK05647 1 MKRIVVLASGNGSNLQ---AIIDACAAGQLPAEIVAVISDRPDAYGLERAEAA-----------GIPTFVLDHKDFP--- 63 (200)
T ss_pred CceEEEEEcCCChhHH---HHHHHHHcCCCCcEEEEEEecCccchHHHHHHHc-----------CCCEEEECccccC---
Confidence 6899999998744333 5666677654 7787765433 222 222222 3555544321000
Q ss_pred CCCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcc-hHHHHHHHhCCceEEEecc
Q 012587 81 RTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS-RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~-~~~~~A~~lgiP~v~~~~~ 141 (460)
+ .....+.+.+.++++ +||++|+-.+.. ....+-+.....++-++++
T Consensus 64 ----~--------~~~~~~~~~~~l~~~--~~D~iv~~~~~~ii~~~~l~~~~~~~iNiHps 111 (200)
T PRK05647 64 ----S--------REAFDAALVEALDAY--QPDLVVLAGFMRILGPTFVSAYEGRIINIHPS 111 (200)
T ss_pred ----c--------hhHhHHHHHHHHHHh--CcCEEEhHHhhhhCCHHHHhhccCCEEEEeCc
Confidence 0 001224556667776 999999865532 2333333344445555443
|
|
| >PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides | Back alignment and domain information |
|---|
Probab=83.56 E-value=5.4 Score=34.62 Aligned_cols=100 Identities=15% Similarity=0.170 Sum_probs=51.6
Q ss_pred EEEEcCCCCCCHHHHHHHHHHHHhC--CCeEEEEeCccc-hhHHhhccccccccccCCCCceEEecCCCCCCCCCCCCCC
Q 012587 9 VAILPLPAVGHVNSMLNLAELLGHA--GIKITFLNTEHY-YDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPDK 85 (460)
Q Consensus 9 il~~~~~~~Gh~~p~l~La~~L~~r--GH~Vt~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (460)
.+-+=..+.|-+.-..+|+++|.++ |+.|.+-++... .+.+.+...+ .+...-+|- +
T Consensus 23 ~iWiHa~SvGE~~a~~~Li~~l~~~~p~~~illT~~T~tg~~~~~~~~~~---------~v~~~~~P~----D------- 82 (186)
T PF04413_consen 23 LIWIHAASVGEVNAARPLIKRLRKQRPDLRILLTTTTPTGREMARKLLPD---------RVDVQYLPL----D------- 82 (186)
T ss_dssp -EEEE-SSHHHHHHHHHHHHHHTT---TS-EEEEES-CCHHHHHHGG-GG---------G-SEEE-------S-------
T ss_pred cEEEEECCHHHHHHHHHHHHHHHHhCCCCeEEEEecCCchHHHHHHhCCC---------CeEEEEeCc----c-------
Confidence 3444456789999999999999998 899988886333 3344333211 122221321 1
Q ss_pred hHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcch--HHHHHHHhCCceEEEecc
Q 012587 86 FPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSR--AIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 86 ~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~~--~~~~A~~lgiP~v~~~~~ 141 (460)
....++..++.+ +||++|.--...| ....|++.|||.+.++--
T Consensus 83 -----------~~~~~~rfl~~~--~P~~~i~~EtElWPnll~~a~~~~ip~~LvNar 127 (186)
T PF04413_consen 83 -----------FPWAVRRFLDHW--RPDLLIWVETELWPNLLREAKRRGIPVVLVNAR 127 (186)
T ss_dssp -----------SHHHHHHHHHHH----SEEEEES----HHHHHH-----S-EEEEEE-
T ss_pred -----------CHHHHHHHHHHh--CCCEEEEEccccCHHHHHHHhhcCCCEEEEeee
Confidence 335567888888 9999875444444 455677889999998653
|
Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B. |
| >PRK01077 cobyrinic acid a,c-diamide synthase; Validated | Back alignment and domain information |
|---|
Probab=83.33 E-value=6.2 Score=39.63 Aligned_cols=107 Identities=14% Similarity=0.200 Sum_probs=64.3
Q ss_pred CCcEEEEEcC-CCCCCHHHHHHHHHHHHhCCCeEEEEeCccchh---HHhhccccccccccCCCCceEEecCCCCCCCCC
Q 012587 5 DHVHVAILPL-PAVGHVNSMLNLAELLGHAGIKITFLNTEHYYD---RVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHP 80 (460)
Q Consensus 5 ~~~~il~~~~-~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (460)
+|.+|+|... ..-|-..-+..|++.|+++|++|..+-...... ...... +.+..+.
T Consensus 2 ~m~~i~I~gt~s~~GKT~it~~L~~~L~~~G~~V~~fK~Gpd~~d~~~~~~~~--------------------g~~~~~l 61 (451)
T PRK01077 2 RMPALVIAAPASGSGKTTVTLGLMRALRRRGLRVQPFKVGPDYIDPAYHTAAT--------------------GRPSRNL 61 (451)
T ss_pred CCcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCCcceeecCCCcccHHHHHHHh--------------------CCCcccC
Confidence 4556777755 468999999999999999999999886532110 000000 1111110
Q ss_pred CCCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCC------------cchHHHHHHHhCCceEEEecch
Q 012587 81 RTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGY------------MSRAIDAAREVGVSIIYFRTIS 142 (460)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~------------~~~~~~~A~~lgiP~v~~~~~~ 142 (460)
+ .. ....+.+.+.+..+..+.|++|.+.. ......+|+.++.|+|.+....
T Consensus 62 d----~~-------~~~~~~v~~~~~~~~~~~D~vlVEGagGl~~g~~~~~~~~s~adiA~~l~~pviLV~~~~ 124 (451)
T PRK01077 62 D----SW-------MMGEELVRALFARAAQGADIAVIEGVMGLFDGAGSDPDEGSTADIAKLLGAPVVLVVDAS 124 (451)
T ss_pred C----ce-------eCCHHHHHHHHHHhcccCCEEEEECCCccccCCccCCCCCCHHHHHHHhCCCEEEEECCc
Confidence 0 00 00123444555444347899987443 1236789999999999998643
|
|
| >PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE | Back alignment and domain information |
|---|
Probab=83.27 E-value=25 Score=29.19 Aligned_cols=139 Identities=14% Similarity=0.108 Sum_probs=72.5
Q ss_pred cEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccc
Q 012587 268 SVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVG 347 (460)
Q Consensus 268 ~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~ 347 (460)
|.|-|-+||.+ +....+++...|++.|..+-+.+- ..+..|+.+.+... . +.+...+
T Consensus 1 p~V~Ii~gs~S--D~~~~~~a~~~L~~~gi~~~~~V~--------saHR~p~~l~~~~~----------~---~~~~~~~ 57 (150)
T PF00731_consen 1 PKVAIIMGSTS--DLPIAEEAAKTLEEFGIPYEVRVA--------SAHRTPERLLEFVK----------E---YEARGAD 57 (150)
T ss_dssp -EEEEEESSGG--GHHHHHHHHHHHHHTT-EEEEEE----------TTTSHHHHHHHHH----------H---TTTTTES
T ss_pred CeEEEEeCCHH--HHHHHHHHHHHHHHcCCCEEEEEE--------eccCCHHHHHHHHH----------H---hccCCCE
Confidence 34566677765 778889999999999877644442 11234544322111 0 1111223
Q ss_pred cccccCCh----hHHHHHHHhCCceecccccccchhhH----HHHHhhhceeeeecCCcchHHHHHHHHHHHh--HhHHH
Q 012587 348 GFLTHCGW----NSTLESIVAGMPMICWPSFADQQINS----RFVGEVWKLGLDIKDLCDRNIVEKAVNDLMV--ERKEE 417 (460)
Q Consensus 348 ~~I~HGG~----gs~~eal~~GvP~l~~P~~~DQ~~na----~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~--~~~~~ 417 (460)
+||.=.|. .++..++. -+|++.+|...++.... ..+..=-|+++..-.--+...-.-.--++|. | ++
T Consensus 58 viIa~AG~~a~Lpgvva~~t-~~PVIgvP~~~~~~~g~d~l~S~vqMp~g~pvatv~i~~~~nAA~~A~~ILa~~d--~~ 134 (150)
T PF00731_consen 58 VIIAVAGMSAALPGVVASLT-TLPVIGVPVSSGYLGGLDSLLSIVQMPSGVPVATVGINNGFNAALLAARILALKD--PE 134 (150)
T ss_dssp EEEEEEESS--HHHHHHHHS-SS-EEEEEE-STTTTTHHHHHHHHT--TTS--EE-SSTHHHHHHHHHHHHHHTT---HH
T ss_pred EEEEECCCcccchhhheecc-CCCEEEeecCcccccCcccHHHHHhccCCCCceEEEccCchHHHHHHHHHHhcCC--HH
Confidence 37776664 34444444 79999999876644222 2222222555444211133333333344544 5 89
Q ss_pred HHHHHHHHHHHHHHH
Q 012587 418 FMESADRMANLAKKS 432 (460)
Q Consensus 418 ~~~~a~~l~~~~~~~ 432 (460)
++++.+..++++++.
T Consensus 135 l~~kl~~~~~~~~~~ 149 (150)
T PF00731_consen 135 LREKLRAYREKMKEK 149 (150)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcc
Confidence 999999998888763
|
PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D .... |
| >smart00851 MGS MGS-like domain | Back alignment and domain information |
|---|
Probab=82.91 E-value=13 Score=27.72 Aligned_cols=79 Identities=11% Similarity=0.154 Sum_probs=47.9
Q ss_pred HHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEE-ecCCCCCCCCCCCCCChHHHHHHHHhhCcHHH
Q 012587 23 MLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFK-TLTDGLPRDHPRTPDKFPELVDSLNCATPPLL 101 (460)
Q Consensus 23 ~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 101 (460)
++.+++.|.+.|++|. .| +..++.+.+. | +.+. .++. ...+ .+.+
T Consensus 2 ~~~~~~~l~~lG~~i~-AT-~gTa~~L~~~-G-----------i~~~~~~~k-i~~~-------------------~~~i 47 (90)
T smart00851 2 LVELAKRLAELGFELV-AT-GGTAKFLREA-G-----------LPVKTLHPK-VHGG-------------------ILAI 47 (90)
T ss_pred HHHHHHHHHHCCCEEE-Ec-cHHHHHHHHC-C-----------CcceeccCC-CCCC-------------------CHHH
Confidence 4688999999999983 44 4667777653 3 4332 1111 0011 0234
Q ss_pred HHHHHcCCCCccEEEEcCC---------cchHHHHHHHhCCceEE
Q 012587 102 KEMVSDSKSPVNCIITDGY---------MSRAIDAAREVGVSIIY 137 (460)
Q Consensus 102 ~~~~~~~~~~pD~vv~D~~---------~~~~~~~A~~lgiP~v~ 137 (460)
.+++++ .+.|+||.-.. .....-+|...+||+++
T Consensus 48 ~~~i~~--g~id~VIn~~~~~~~~~~~d~~~iRr~A~~~~Ip~~T 90 (90)
T smart00851 48 LDLIKN--GEIDLVINTLYPLGAQPHEDGKALRRAAENIDIPGAT 90 (90)
T ss_pred HHHhcC--CCeEEEEECCCcCcceeccCcHHHHHHHHHcCCCeeC
Confidence 555655 49999987432 11456778899999864
|
This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in Carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. This family also includes inosicase. The known structures in this family show a common phosphate binding site PUBMED:10526357. |
| >PRK05973 replicative DNA helicase; Provisional | Back alignment and domain information |
|---|
Probab=82.56 E-value=8.5 Score=34.78 Aligned_cols=45 Identities=22% Similarity=0.090 Sum_probs=38.2
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhc
Q 012587 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRH 52 (460)
Q Consensus 8 ~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~ 52 (460)
=+++...|+.|-..-.+.++...+++|..|.|++.+...+.+.+.
T Consensus 66 l~LIaG~PG~GKT~lalqfa~~~a~~Ge~vlyfSlEes~~~i~~R 110 (237)
T PRK05973 66 LVLLGARPGHGKTLLGLELAVEAMKSGRTGVFFTLEYTEQDVRDR 110 (237)
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHH
Confidence 567788889999999999999988899999999988776666544
|
|
| >PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional | Back alignment and domain information |
|---|
Probab=82.37 E-value=6.7 Score=37.36 Aligned_cols=43 Identities=21% Similarity=0.265 Sum_probs=38.1
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhC--CCeEEEEeCccchhHH
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHA--GIKITFLNTEHYYDRV 49 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~r--GH~Vt~~~~~~~~~~~ 49 (460)
|||+++-..+.||+.-+.++.+.|+++ +.+|++++.+.+.+.+
T Consensus 1 m~ILii~~~~iGD~v~~~p~~~~lk~~~P~a~I~~l~~~~~~~l~ 45 (322)
T PRK10964 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIQFDWVVEEGFAQIP 45 (322)
T ss_pred CeEEEEeccchHHHHhHHHHHHHHHHhCCCCEEEEEECHHHHHHH
Confidence 599999999999999999999999997 9999999986654433
|
|
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=81.59 E-value=45 Score=30.93 Aligned_cols=87 Identities=28% Similarity=0.363 Sum_probs=55.3
Q ss_pred CCceeeeecC---hHhhhccccccccccc---CChh-HHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecCCcc
Q 012587 327 ERGCIAGWVP---QEEVLAHSAVGGFLTH---CGWN-STLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCD 399 (460)
Q Consensus 327 ~n~~~~~~vp---~~~il~~~~~~~~I~H---GG~g-s~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~ 399 (460)
.++.+.++++ ...++..+++ ++.- .|.| ++.||+++|+|++... .......+ ...+.|. +....+
T Consensus 257 ~~v~~~g~~~~~~~~~~~~~~~~--~v~ps~~e~~~~~~~Ea~a~g~pvi~~~----~~~~~e~~-~~~~~g~-~~~~~~ 328 (381)
T COG0438 257 DNVKFLGYVPDEELAELLASADV--FVLPSLSEGFGLVLLEAMAAGTPVIASD----VGGIPEVV-EDGETGL-LVPPGD 328 (381)
T ss_pred CcEEEecccCHHHHHHHHHhCCE--EEeccccccchHHHHHHHhcCCcEEECC----CCChHHHh-cCCCceE-ecCCCC
Confidence 5677788888 3446666776 5544 3554 4699999999996664 33333344 2322466 433237
Q ss_pred hHHHHHHHHHHHhHhHHHHHHHHH
Q 012587 400 RNIVEKAVNDLMVERKEEFMESAD 423 (460)
Q Consensus 400 ~~~l~~~i~~~l~~~~~~~~~~a~ 423 (460)
.+.+..++..++++ .+.++...
T Consensus 329 ~~~~~~~i~~~~~~--~~~~~~~~ 350 (381)
T COG0438 329 VEELADALEQLLED--PELREELG 350 (381)
T ss_pred HHHHHHHHHHHhcC--HHHHHHHH
Confidence 89999999999987 53344333
|
|
| >PF10649 DUF2478: Protein of unknown function (DUF2478); InterPro: IPR018912 This is a family of hypothetical bacterial proteins encoded in the vicinity of molybdenum ABC transporter gene-products MobA, MobB and MobC | Back alignment and domain information |
|---|
Probab=81.02 E-value=16 Score=30.61 Aligned_cols=120 Identities=15% Similarity=0.217 Sum_probs=68.6
Q ss_pred EEEEcCCCCCCHHHHH-HHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCC--------CCC
Q 012587 9 VAILPLPAVGHVNSML-NLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLP--------RDH 79 (460)
Q Consensus 9 il~~~~~~~Gh~~p~l-~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~ 79 (460)
|+.+.+...+.+..++ .+|+.|.++|++|.=+........-.. ...+....++++.. ++.
T Consensus 1 iaav~~~~~~~~d~lL~~~a~~L~~~G~rv~G~vQ~~~~~~~~~-----------~~~m~l~dl~~G~~~~IsQ~LG~gs 69 (159)
T PF10649_consen 1 IAAVVYDDGGDIDALLAAFAARLRARGVRVAGLVQRNTADGDGG-----------RCDMDLRDLPSGRRIRISQDLGPGS 69 (159)
T ss_pred CEEEEcCCCCCHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCC-----------ccceEEEECCCCCEEEEeeccCCCC
Confidence 3455666678888866 689999999999987775221111100 22355555554322 222
Q ss_pred CCCCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcc---------hHHHHHHHhCCceEEEecchhHHHH
Q 012587 80 PRTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS---------RAIDAAREVGVSIIYFRTISACAFW 147 (460)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~---------~~~~~A~~lgiP~v~~~~~~~~~~~ 147 (460)
.....+...+-. ....++..+.+ ++|++|.+-|.- .....|-..|||+++..+......+
T Consensus 70 ~gCrLD~~~La~-----A~~~l~~al~~---~~DLlivNkFGk~Ea~G~Glr~~i~~A~~~giPVLt~V~~~~l~~W 138 (159)
T PF10649_consen 70 RGCRLDPGALAE-----ASAALRRALAE---GADLLIVNKFGKQEAEGRGLRDEIAAALAAGIPVLTAVPPRNLEAW 138 (159)
T ss_pred cccccCHHHHHH-----HHHHHHHHHhc---CCCEEEEcccHHhhhcCCCHHHHHHHHHHCCCCEEEEECHHHHHHH
Confidence 112222222211 22344555555 899999997733 2344466889999998876554433
|
However the function could not be confirmed. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 460 | ||||
| 2pq6_A | 482 | Crystal Structure Of Medicago Truncatula Ugt85h2- I | 2e-75 | ||
| 2vce_A | 480 | Characterization And Engineering Of The Bifunctiona | 1e-42 | ||
| 2acw_A | 465 | Crystal Structure Of Medicago Truncatula Ugt71g1 Co | 4e-40 | ||
| 2acv_A | 463 | Crystal Structure Of Medicago Truncatula Ugt71g1 Le | 5e-40 | ||
| 3hbf_A | 454 | Structure Of Ugt78g1 Complexed With Myricetin And U | 8e-38 | ||
| 2c1x_A | 456 | Structure And Activity Of A Flavonoid 3-O Glucosylt | 3e-36 | ||
| 2o6l_A | 170 | Crystal Structure Of The Udp-Glucuronic Acid Bindin | 5e-06 | ||
| 2iya_A | 424 | The Crystal Structure Of Macrolide Glycosyltransfer | 7e-05 |
| >pdb|2PQ6|A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase Length = 482 | Back alignment and structure |
|
| >pdb|2VCE|A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants Length = 480 | Back alignment and structure |
|
| >pdb|2ACW|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose Length = 465 | Back alignment and structure |
|
| >pdb|2ACV|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Length = 463 | Back alignment and structure |
|
| >pdb|3HBF|A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp Length = 454 | Back alignment and structure |
|
| >pdb|2C1X|A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification Length = 456 | Back alignment and structure |
|
| >pdb|2O6L|A Chain A, Crystal Structure Of The Udp-Glucuronic Acid Binding Domain Of The Human Drug Metabolizing Udp-Glucuronosyltransferase 2b7 Length = 170 | Back alignment and structure |
|
| >pdb|2IYA|A Chain A, The Crystal Structure Of Macrolide Glycosyltransferases: A Blueprint For Antibiotic Engineering Length = 424 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 Length = 482 | Back alignment and structure |
|---|
Score = 533 bits (1375), Expect = 0.0
Identities = 161/487 (33%), Positives = 255/487 (52%), Gaps = 37/487 (7%)
Query: 1 MEKQDH--VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFS 58
M + HV ++P P GH+N + LA+LL G ITF+NTE+ + R+++ S
Sbjct: 1 MGNFANRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLK--SRGPK 58
Query: 59 RYMQIPGFQFKTLTDGLP--RDHPRTPDKFPELVDSLNCATPPLLKEMV-----SDSKSP 111
+ F F+++ DGL P L S+ E++ S + P
Sbjct: 59 AFDGFTDFNFESIPDGLTPMEGDGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPP 118
Query: 112 VNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELPIKGF----- 166
V C+++D MS I AA E + + + + SAC+ + ++ G +P K
Sbjct: 119 VTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERGIIPFKDESYLTN 178
Query: 167 ---------------LRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLE 211
R +D+ F R +P D L F ++LNTF +LE
Sbjct: 179 GCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELE 238
Query: 212 GPILSQIRNHSCPNIYSIGPLNAHLK--VRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSV 269
+++ + + P+IY IGPL + LK +I + S+LWK D C+ WL+ + SV
Sbjct: 239 SDVINALSST-IPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSV 297
Query: 270 IYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERG 329
+YV+FGS VM+ +QL+EF +GL + KKSFLW+IRPDL+ G G E +RG
Sbjct: 298 VYVNFGSTTVMTPEQLLEFAWGLANCKKSFLWIIRPDLVIG--GSVIFSSEFTNEIADRG 355
Query: 330 CIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWK 389
IA W PQ++VL H ++GGFLTHCGWNST ESI AG+PM+CWP FADQ + RF+ W+
Sbjct: 356 LIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWE 415
Query: 390 LGLDIKDLCDRNIVEKAVNDLMV-ERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVN 448
+G++I R + K +N+++ ++ ++ + A + A+++ GG SY NL++++
Sbjct: 416 IGMEIDTNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIK 475
Query: 449 DIKMMSS 455
D+ + +
Sbjct: 476 DVLLKQN 482
|
| >2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* Length = 456 | Back alignment and structure |
|---|
Score = 520 bits (1342), Expect = 0.0
Identities = 113/473 (23%), Positives = 205/473 (43%), Gaps = 44/473 (9%)
Query: 1 MEKQ-DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITF--LNTEHYYDRVIRHSSDAF 57
M + + HVA+L P H +L + L A F +T + S
Sbjct: 1 MSQTTTNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTM 60
Query: 58 SRYMQIPGFQFKTLTDGLPRDHPRTPDKFPELVDSLNCATPPL---LKEMVSDSKSPVNC 114
+ ++DG+P + ++ A + V+++ PV+C
Sbjct: 61 Q-----CNIKSYDISDGVPEGYVFAGRPQEDIELFTRAAPESFRQGMVMAVAETGRPVSC 115
Query: 115 IITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELP------------ 162
++ D ++ A D A E+GV+ + F T + + I +I + +
Sbjct: 116 LVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVSGIQGREDELLNF 175
Query: 163 IKGF--LRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRN 220
I G +R RDL + + R ++ A + +N+FE+L+ + + +++
Sbjct: 176 IPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKS 235
Query: 221 HSCPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVM 280
+IGP N + + C+ WL ++ SV+Y+SFG++
Sbjct: 236 K-LKTYLNIGPFNLI----------TPPPVVPNTTGCLQWLKERKPTSVVYISFGTVTTP 284
Query: 281 SRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEV 340
+++ L S+ F+W +R +PE LE T+ G + W PQ EV
Sbjct: 285 PPAEVVALSEALEASRVPFIWSLRDKA------RVHLPEGFLEKTRGYGMVVPWAPQAEV 338
Query: 341 LAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKD-LCD 399
LAH AVG F+THCGWNS ES+ G+P+IC P F DQ++N R V +V ++G+ I+ +
Sbjct: 339 LAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFT 398
Query: 400 RNIVEKAVNDLMV-ERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIK 451
++ + + ++ E+ ++ E+ + A ++V GSS N LV+ +
Sbjct: 399 KSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVS 451
|
| >3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} PDB: 3hbj_A* Length = 454 | Back alignment and structure |
|---|
Score = 515 bits (1328), Expect = 0.0
Identities = 113/471 (23%), Positives = 201/471 (42%), Gaps = 45/471 (9%)
Query: 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITF--LNTEHYYDRVIRHSSDAFS 58
M + +HVA+L P H +L+L + + K+TF T D + S++
Sbjct: 8 MNGNNLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSNEFL- 66
Query: 59 RYMQIPGFQFKTLTDGLPRDHPRTPDKFPELVDSLNCATPP----LLKEMVSDSKSPVNC 114
P ++ + DGLP+ + + + E + A ++ E V+++ + C
Sbjct: 67 -----PNIKYYNVHDGLPKGYVSSGN-PREPIFLFIKAMQENFKHVIDEAVAETGKNITC 120
Query: 115 IITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELP----------IK 164
++TD + D A E+ + T + + I + +
Sbjct: 121 LVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTGSKEVHDVKSIDVLP 180
Query: 165 GF--LRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHS 222
GF L+ DLP D P + + A+ + +N+F + I +++ +
Sbjct: 181 GFPELKASDLPEGVI-KDIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSK- 238
Query: 223 CPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSR 282
+ ++GP N + + C+ WLD+ SV+Y+SFGS+
Sbjct: 239 FKLLLNVGPFNLT----------TPQRKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPP 288
Query: 283 DQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLA 342
+L L F+W R D + ++P+ LE TK +G I W PQ E+L
Sbjct: 289 HELTALAESLEECGFPFIWSFRGD------PKEKLPKGFLERTKTKGKIVAWAPQVEILK 342
Query: 343 HSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKD-LCDRN 401
HS+VG FLTH GWNS LE IV G+PMI P F DQ +N+ V ++G+ + + + +
Sbjct: 343 HSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDNGVLTKE 402
Query: 402 IVEKAVNDLMV-ERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIK 451
++KA+ M E+ + ++ A K+V + G+S + L+ +
Sbjct: 403 SIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT 453
|
| >2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* Length = 463 | Back alignment and structure |
|---|
Score = 466 bits (1201), Expect = e-162
Identities = 123/479 (25%), Positives = 200/479 (41%), Gaps = 50/479 (10%)
Query: 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLG--HAGIKITFLNTEHYYDRVIRHSSDAFS 58
+ K + +P P +GH+ S L A+LL + IT + +
Sbjct: 6 INKN--SELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVL 63
Query: 59 RYMQIPGFQFKTLTDGLPRDHPRTPDKFPELVDSLNCATPPLLKEMVSD-SKSPVNCIIT 117
P Q L + P + + + P +K + + V ++
Sbjct: 64 A--SQPQIQLIDLPEVEPPPQELLKS-PEFYILTFLESLIPHVKATIKTILSNKVVGLVL 120
Query: 118 DGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAG------------ELP-IK 164
D + ID E G+ F T + + + +P I
Sbjct: 121 DFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEEVFDDSDRDHQLLNIPGIS 180
Query: 165 GFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHS-- 222
+ LP C D A R G+I+NTF DLE + + +H
Sbjct: 181 NQVPSNVLPDACFNKDGGYIAYYKLAERFRD---TKGIIVNTFSDLEQSSIDALYDHDEK 237
Query: 223 CPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAV-MS 281
P IY++GPL + + + WLD+QP +SV+++ FGS+ V
Sbjct: 238 IPPIYAVGPLLDL------KGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFG 291
Query: 282 RDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLE--ATKERGCIAGWVPQEE 339
Q+ E GL HS FLW + + PE LE + +G I GW PQ E
Sbjct: 292 PSQIREIALGLKHSGVRFLWSNSAE-------KKVFPEGFLEWMELEGKGMICGWAPQVE 344
Query: 340 VLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIK---- 395
VLAH A+GGF++HCGWNS LES+ G+P++ WP +A+QQ+N+ + + W +GL ++
Sbjct: 345 VLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYR 404
Query: 396 ---DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIK 451
D+ +EK + DLM ++ + M +++ +V GGSS ++ +L++DI
Sbjct: 405 KGSDVVAAEEIEKGLKDLM-DKDSIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDIT 462
|
| >2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* Length = 480 | Back alignment and structure |
|---|
Score = 462 bits (1190), Expect = e-160
Identities = 126/491 (25%), Positives = 202/491 (41%), Gaps = 49/491 (9%)
Query: 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHA-GIKITFLNTEHYYDRVIRHSSDAFSR 59
ME+ HVAI+P P +GH+ ++ A+ L H G+ +TF+ + +
Sbjct: 1 MEESKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLP 60
Query: 60 YMQIPGFQFKTLTDGLPRDHPRTPDKFPELVDSLNCATPPLLKEMV---SDSKSPVNCII 116
L D + + + P L+++ + ++
Sbjct: 61 ----SSISSVFLPPVDLTDLSSSTR-IESRISLTVTRSNPELRKVFDSFVEGGRLPTALV 115
Query: 117 TDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELPIKGF---------- 166
D + + A D A E V F +A F +P + + +
Sbjct: 116 VDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCEFRELTEPLMLPGCV 175
Query: 167 -LRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSC-- 223
+ +D D D T+ A+G+++NTF +LE + ++
Sbjct: 176 PVAGKDFLDP--AQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDK 233
Query: 224 PNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRD 283
P +Y +GPL K + + C+ WLD QP SV+YVSFGS ++ +
Sbjct: 234 PPVYPVGPLVNIGK---------QEAKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCE 284
Query: 284 QLIEFYYGLVHSKKSFLWVIRPDLISGK----------DGENQIPEELLEATKERGC-IA 332
QL E GL S++ FLWVIR D +P LE TK+RG I
Sbjct: 285 QLNELALGLADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIP 344
Query: 333 GWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGL 392
W PQ +VLAH + GGFLTHCGWNSTLES+V+G+P+I WP +A+Q++N+ + E + L
Sbjct: 345 FWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAAL 404
Query: 393 DIKDLCDRNI----VEKAVNDLMV-ERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLV 447
+ D + V + V LM E + + A + + G+S L +
Sbjct: 405 RPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVA 464
Query: 448 NDIKMMSSQPQ 458
K + +
Sbjct: 465 LKWKAHKKELE 475
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} Length = 424 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 2e-26
Identities = 63/436 (14%), Positives = 129/436 (29%), Gaps = 66/436 (15%)
Query: 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQ 67
H++ +P GHVN L + + L G ++++ T+ + +V G
Sbjct: 14 HISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAA------------GAT 61
Query: 68 FKTLTDGLPRDHP---RTPDKFPELVDSLNCATPPLLKEMVSDSKS-PVNCIITDGYMSR 123
LP++ P+ + +L ++ + I+ D
Sbjct: 62 PVVYDSILPKESNPEESWPEDQESAMGLFLDEAVRVLPQLEDAYADDRPDLIVYDIASWP 121
Query: 124 AIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELPIKGFLRCRDLPSFCRVNDPMD 183
A R+ + + A+ F + +
Sbjct: 122 APVLGRKWDIPFVQLSPTFV-AYEGFEEDVPAVQDPTADRGEEAAAPAGTGDAEEGAEAE 180
Query: 184 PHLLLFARETRLSAHADGLILNTFEDLEGP--ILSQI-------RNHSCPNIYSIGPLNA 234
L+ F G+ E L P + + + N +GP
Sbjct: 181 DGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIKGDTVGDNYTFVGPTYG 240
Query: 235 HLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVH 294
+ W + V+ ++ GS D +
Sbjct: 241 DRSHQGT------------------WEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDG 282
Query: 295 SKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCG 354
+ + + GE +P + + WVPQ ++L ++ F+TH G
Sbjct: 283 LDWHVVLSVGRFVDPADLGE--VPPNVE--------VHQWVPQLDILTKASA--FITHAG 330
Query: 355 WNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLG----LDIKDLCDRNIVEKAVNDL 410
ST+E++ +PM+ P A+Q +N+ + E LG + + + +AV +
Sbjct: 331 MGSTMEALSNAVPMVAVPQIAEQTMNAERIVE---LGLGRHIPRDQV-TAEKLREAVLAV 386
Query: 411 MVERKEEFMESADRMA 426
+ E +
Sbjct: 387 ASD--PGVAERLAAVR 400
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} Length = 430 | Back alignment and structure |
|---|
Score = 108 bits (271), Expect = 7e-26
Identities = 68/434 (15%), Positives = 136/434 (31%), Gaps = 65/434 (14%)
Query: 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRY 60
+ H+A+ + A GHVN L + L G ++T+ + D+V
Sbjct: 2 TTQTTPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAAT-------- 53
Query: 61 MQIPGFQFKTLTDGLPRDHPRTPDKFPELVDSLNC---ATPPLLKEMVSD-SKSPVNCII 116
G + LP L+D++ L ++ + + ++
Sbjct: 54 ----GPRPVLYHSTLPGPDADPEAWGSTLLDNVEPFLNDAIQALPQLADAYADDIPDLVL 109
Query: 117 TDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELPIKGFLRCRDLPSFC 176
D A AR GV + + A+ + ++ + + R R +
Sbjct: 110 HDITSYPARVLARRWGVPAVSLSP-NLVAWKGYE--EEVAEPMWREPRQTERGR--AYYA 164
Query: 177 RVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPNIYS-IGPLNAH 235
R + + + +T ++H ++ + L+ + ++Y+ +G
Sbjct: 165 RFEAWLKENGITEHPDT-FASHPPRSLVLIPKALQPH-----ADRVDEDVYTFVGACQGD 218
Query: 236 LKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHS 295
W + V+ VS GS E +
Sbjct: 219 RAEEGG------------------WQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNL 260
Query: 296 KKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGW 355
L + + G P EL E + + WVPQ +L + + F+TH G
Sbjct: 261 PGWHLVL--------QIGRKVTPAELGELP-DNVEVHDWVPQLAILRQADL--FVTHAGA 309
Query: 356 NSTLESIVAGMPMICWPSFADQQINSRFVGEVWK---LGLDIKDLCDRNIVEKAVNDLMV 412
+ E + PMI P DQ N+ + L ++ +++ + L+
Sbjct: 310 GGSQEGLATATPMIAVPQAVDQFGNADML--QGLGVARKLATEEA-TADLLRETALALVD 366
Query: 413 ERKEEFMESADRMA 426
+ E R+
Sbjct: 367 D--PEVARRLRRIQ 378
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} Length = 402 | Back alignment and structure |
|---|
Score = 99.8 bits (249), Expect = 4e-23
Identities = 67/430 (15%), Positives = 116/430 (26%), Gaps = 69/430 (16%)
Query: 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQ 67
H+ + GHV L L L G +IT++ T + D V G +
Sbjct: 6 HILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAA------------GAE 53
Query: 68 FKTLTDGLPRDH----PRTPDKFPELVDSLNCATPPLLKEMVSDSKS-PVNCIITDGYMS 122
H + D +L +L+ P + ++ D +
Sbjct: 54 VVLYKSEFDTFHVPEVVKQEDAETQLHLVYVRENVAILRAAEEALGDNPPDLVVYDVFPF 113
Query: 123 RAID-AAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELPIKGFLRCRDLPSFCRVNDP 181
A A + A G+ + D
Sbjct: 114 IAGRLLAARWDRPAVRLTGGFAANEHYSLFKELWKSNGQRHPADVEAVHS-----VLVDL 168
Query: 182 MDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPNIYSIGPLNAHLKVRIP 241
+ + + + I+ + + +GP P
Sbjct: 169 LGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPF-----AETFDERFAFVGPTLTGRDG-QP 222
Query: 242 EKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLW 301
W +P V+ VS G+ + + +
Sbjct: 223 G-----------------WQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVM 265
Query: 302 VIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLES 361
I G + + L + W+P VLAH+ LTH + LE+
Sbjct: 266 AI------GGFLDPAVLGPLPPNVE----AHQWIPFHSVLAHARA--CLTHGTTGAVLEA 313
Query: 362 IVAGMPMICWPSFA-DQQINSRFVGEVWKLG----LDIKDLCDRNIVEKAVNDLMVERKE 416
AG+P++ P FA + ++ V E LG L L + + +AV L +
Sbjct: 314 FAAGVPLVLVPHFATEAAPSAERVIE---LGLGSVLRPDQL-EPASIREAVERLAAD--S 367
Query: 417 EFMESADRMA 426
E RM
Sbjct: 368 AVRERVRRMQ 377
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} Length = 170 | Back alignment and structure |
|---|
Score = 90.0 bits (224), Expect = 2e-21
Identities = 35/171 (20%), Positives = 70/171 (40%), Gaps = 19/171 (11%)
Query: 260 WLDKQPKQSVIYVSFGS-IAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIP 318
++ + V+ S GS ++ M+ ++ L + LW + G N
Sbjct: 14 FVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNKPDTL-GLN--- 69
Query: 319 EELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQ 378
T+ + W+PQ ++L H F+TH G N E+I G+PM+ P FADQ
Sbjct: 70 ------TR----LYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQP 119
Query: 379 IN-SRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVERKEEFMESADRMANL 428
N + + +D + + A+ ++ + + E+ +++ +
Sbjct: 120 DNIAHMKARGAAVRVDFNTM-SSTDLLNALKRVINDPS--YKENVMKLSRI 167
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* Length = 415 | Back alignment and structure |
|---|
Score = 89.4 bits (222), Expect = 2e-19
Identities = 58/432 (13%), Positives = 124/432 (28%), Gaps = 74/432 (17%)
Query: 8 HVAILPLPAVGHVNSMLNLAELL---GHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIP 64
H+ I+ + + G + L + L GH +++++ + + V
Sbjct: 22 HLLIVNVASHGLILPTLTVVTELVRRGH---RVSYVTAGGFAEPVRAA------------ 66
Query: 65 GFQFKTLTDGLP----RDHPRTPDKFPELVDSLNCATPPLLKEMVSDSKS-PVNCIITDG 119
G + + + D +L+ + ++ D
Sbjct: 67 GATVVPYQSEIIDADAAEVFGSDDLGVRPHLMYLRENVSVLRATAEALDGDVPDLVLYDD 126
Query: 120 YMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELPIKGFLRCRDLPSFC-RV 178
+ A R +A A + + + G + DLP F +
Sbjct: 127 FPFIAGQLLAARW-RRPAVRLSAAFASNEHYSFS----QDMVTLAGTIDPLDLPVFRDTL 181
Query: 179 NDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPNIYSIGPLNAHLKV 238
D + H L + + ++ + + + +GP +
Sbjct: 182 RDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIA-----GDTFDDRFVFVGPCFDDRRF 236
Query: 239 RIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKS 298
+ E W V+ VS G+ +
Sbjct: 237 -LGE-----------------WTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWH 278
Query: 299 FLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNST 358
+ + + G+ +P + WVP +VL + V +TH G +
Sbjct: 279 VVMTLGGQVDPAALGD--LPPNVE--------AHRWVPHVKVLEQATV--CVTHGGMGTL 326
Query: 359 LESIVAGMPMICWPSFADQQINSRFVGEVWKLG----LDIKDLCDRNIVEKAVNDLMVER 414
+E++ G P++ P D Q +R V + LG L + D + + AV + +
Sbjct: 327 MEALYWGRPLVVVPQSFDVQPMARRVDQ---LGLGAVLPGEKA-DGDTLLAAVGAVAAD- 381
Query: 415 KEEFMESADRMA 426
+ + M
Sbjct: 382 -PALLARVEAMR 392
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* Length = 412 | Back alignment and structure |
|---|
Score = 85.1 bits (211), Expect = 4e-18
Identities = 74/439 (16%), Positives = 133/439 (30%), Gaps = 89/439 (20%)
Query: 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPG 65
H+ V L GH +L LA AG ++TF E + + + G
Sbjct: 20 HMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRKL------------G 67
Query: 66 FQFKTLTDGLPRDHPRTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSRAI 125
F+ D + DS TP L E+ V I
Sbjct: 68 FEPVAT-GMPVFDGFLAALRIRFDTDSPEGLTPEQLSELPQIVFGRV---IPQRVFDELQ 123
Query: 126 DAAREVGVSIIYFRTIS--------------ACAFWSFHCIPDIIDAGELPIKGFLRCRD 171
+ ++ + C D+ + E ++G +
Sbjct: 124 PVIERLRPDLVVQEISNYGAGLAALKAGIPTICHGVGRDTPDDLTRSIEEEVRGLAQRLG 183
Query: 172 LPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPNIYSIGP 231
L R+ + I L+ P + P + + P
Sbjct: 184 LD----------------LPPGRIDGFGNPFIDIFPPSLQEP-----EFRARPRRHELRP 222
Query: 232 LNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYG 291
+ + +P W + + ++Y++ G+ + + + L G
Sbjct: 223 VPFAEQGDLPA--------W--------LSSRDTARPLVYLTLGTSSGGTVEVLRAAIDG 266
Query: 292 LVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLT 351
L L P L GE +P + + WVPQ +L H + +
Sbjct: 267 LAGLDADVLVASGPSLDVSGLGE--VPANVR--------LESWVPQAALLPHVDL--VVH 314
Query: 352 HCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLG----LDIKDLCDRNIVEKAV 407
H G +TL ++ AG+P + +P D N++ V + G L ++ + V A
Sbjct: 315 HGGSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQ---AGAGDHLLPDNI-SPDSVSGAA 370
Query: 408 NDLMVERKEEFMESADRMA 426
L+ E E + A +A
Sbjct: 371 KRLLAE--ESYRAGARAVA 387
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} Length = 441 | Back alignment and structure |
|---|
Score = 74.1 bits (182), Expect = 2e-14
Identities = 58/436 (13%), Positives = 129/436 (29%), Gaps = 46/436 (10%)
Query: 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRY 60
+ + H+ V + + H+ ++ LA AG ++ + + + + A
Sbjct: 15 VPRGSHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITAAGLTAVPVG 74
Query: 61 MQIPGFQFKTLTDGLPRDHPRTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGY 120
+ F T D+ R+ D +L ++ +++ + + D
Sbjct: 75 TDVDLVDFMTHAGHDIIDYVRSLDFSERDPATLTWEHLLGMQTVLTPT--FYALMSPDTL 132
Query: 121 MSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELPIKGFLRCRDLPSFCRVND 180
+ + R+ ++ + F + A R
Sbjct: 133 IEGMVSFCRKWRPDLVIW---EPLTFAAPIA------AAVTGTPHARLLWGPDITTRARQ 183
Query: 181 PMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPNIYSIGPLNAHLKVRI 240
L E R A+ L T E GP + I +R+
Sbjct: 184 NFLGLLPDQPEEHREDPLAEWLTW-TLEKYGGPAFDEEVVVGQWTIDPAPAA-----IRL 237
Query: 241 PEKTYSSSSL---WKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKK 297
+ + WL +P++ + ++ G + L+ +
Sbjct: 238 DTGLKTVGMRYVDYNGPSVVPEWLHDEPERRRVCLTLGISS-RENSIGQVSIEELLGA-- 294
Query: 298 SFLWVIRPD---LISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCG 354
V D + + Q+ + + G+VP +L A + H G
Sbjct: 295 ----VGDVDAEIIATF--DAQQLEG--VANIPDNVRTVGFVPMHALLPTCAA--TVHHGG 344
Query: 355 WNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLG----LDIKDLCDRNIVEKAVNDL 410
S + + G+P + P D + ++ E G L + +L + + ++V +
Sbjct: 345 PGSWHTAAIHGVPQVILPDGWDTGVRAQRTQE---FGAGIALPVPEL-TPDQLRESVKRV 400
Query: 411 MVERKEEFMESADRMA 426
+ + A RM
Sbjct: 401 LDD--PAHRAGAARMR 414
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} Length = 384 | Back alignment and structure |
|---|
Score = 72.5 bits (178), Expect = 4e-14
Identities = 59/390 (15%), Positives = 104/390 (26%), Gaps = 84/390 (21%)
Query: 9 VAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQF 68
+ + + V ++ LA +AG ++ + V G
Sbjct: 3 ILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTGV------------GLPA 50
Query: 69 -----KTLTDGLPRDHPRTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSR 123
+ + D P+ P + T M + R
Sbjct: 51 VATTDLPIRHFITTDREGRPEAIPSDPVAQARFTGRWFARM------------AASSLPR 98
Query: 124 AIDAAREVGVSIIYFRTISACAFWSFHCIPDII--DAGELPIKGFLRCRDLPSFCRVNDP 181
+D +R PD+I +P + D
Sbjct: 99 MLDFSRAWR--------------------PDLIVGGTMSYVAPLLALHLGVPHARQTWDA 138
Query: 182 MDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPNIYSIGPLNAHLKVRIP 241
+D + + L L L E L P + CP +R
Sbjct: 139 VDADGIHPGADAELRPELSELGL---ERLPAP---DLFIDICPPSLRPANAAPARMMRHV 192
Query: 242 EKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAV-MSRDQLIEFYYGLVHSKKSFL 300
W+ + + + V+ GS S D+ +F GL
Sbjct: 193 --------ATSRQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLA------- 237
Query: 301 WVIRPDLISGKDGEN--QIPEELLEATKER--GCIAGWVPQEEVLAHSAVGGFLTHCGWN 356
+ D E P+ + EA + GW P + V + + H G
Sbjct: 238 -----KDLVRWDVELIVAAPDTVAEALRAEVPQARVGWTPLDVVAPTCDL--LVHHAGGV 290
Query: 357 STLESIVAGMPMICWPSFADQQINSRFVGE 386
STL + AG+P + P + + +R V +
Sbjct: 291 STLTGLSAGVPQLLIPKGSVLEAPARRVAD 320
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* Length = 398 | Back alignment and structure |
|---|
Score = 71.0 bits (174), Expect = 2e-13
Identities = 24/173 (13%), Positives = 54/173 (31%), Gaps = 25/173 (14%)
Query: 259 AWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGE---- 314
L P + + ++ G+I + + ++ D +
Sbjct: 224 DRLPPVPARPEVAITMGTIELQAFGI--GAVEPII------------AAAGEVDADFVLA 269
Query: 315 -NQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPS 373
+ L GW P +L + H G + + +I AG+P + P
Sbjct: 270 LGDLDISPLGTLPRNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPD 327
Query: 374 FADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVERKEEFMESADRMA 426
DQ ++ + G+ + D+ + + L+ + E +A +
Sbjct: 328 PRDQFQHTAREAVS-RRGIGLVSTSDKVDAD-LLRRLIGD--ESLRTAAREVR 376
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* Length = 391 | Back alignment and structure |
|---|
Score = 70.6 bits (173), Expect = 2e-13
Identities = 19/141 (13%), Positives = 42/141 (29%), Gaps = 26/141 (18%)
Query: 254 DRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVI-----RPD-- 306
+ AW + + + G + + + L + P
Sbjct: 205 SGAFPAWGAARTSARRVCICMGRMVLNATGP------------APLLRAVAAATELPGVE 252
Query: 307 -LISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAG 365
+I+ + +L + + IA VP L + + G + + G
Sbjct: 253 AVIAVPPEHRALLTDLPDNAR----IAESVPLNLFLRTCEL--VICAGGSGTAFTATRLG 306
Query: 366 MPMICWPSFADQQINSRFVGE 386
+P + P + DQ +R +
Sbjct: 307 IPQLVLPQYFDQFDYARNLAA 327
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* Length = 398 | Back alignment and structure |
|---|
Score = 69.0 bits (169), Expect = 6e-13
Identities = 23/133 (17%), Positives = 49/133 (36%), Gaps = 15/133 (11%)
Query: 259 AWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGE---- 314
+W+ ++ KQ + ++FG+ + I L+ + + E
Sbjct: 219 SWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQ------ALS--QELPKLGFEVVVA 270
Query: 315 -NQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPS 373
+ + L+ E AG P ++ V + H G +TL + G+P + P
Sbjct: 271 VSDKLAQTLQPLPEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQVSVPV 328
Query: 374 FADQQINSRFVGE 386
A+ ++R +
Sbjct: 329 IAEVWDSARLLHA 341
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 Length = 416 | Back alignment and structure |
|---|
Score = 59.9 bits (145), Expect = 6e-10
Identities = 26/180 (14%), Positives = 52/180 (28%), Gaps = 26/180 (14%)
Query: 251 WKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISG 310
+ A+L +++ FGS + + + R L G
Sbjct: 223 RPLPPELEAFLAAGSP--PVHIGFGSSSGRGIADAAKVAVEAIR-----AQGRRVILSRG 275
Query: 311 KDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMIC 370
+L ++ V + + A + H + + AG+P +
Sbjct: 276 WTEL------VLPDDRDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLV 327
Query: 371 WPSFADQQINSRFVGEVWKLG----LDIKDLCDRNIVEKAVNDLMVERKEEFMESADRMA 426
P DQ + V LG D ++ A+ ++ E A+ +A
Sbjct: 328 IPRNTDQPYFAGRVAA---LGIGVAHDGPTPTFESLSA-ALTTVL---APETRARAEAVA 380
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} PDB: 3h4i_A* 1pn3_A* 1pnv_A* Length = 404 | Back alignment and structure |
|---|
Score = 58.0 bits (140), Expect = 3e-09
Identities = 33/180 (18%), Positives = 54/180 (30%), Gaps = 28/180 (15%)
Query: 251 WKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISG 310
+ +L +YV FGS + + V+ L SG
Sbjct: 207 RPLSAELEGFLRAGSP--PVYVGFGSGPAPAEAARVAIEAVRAQG----RRVV---LSSG 257
Query: 311 KDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMIC 370
G +I E + + G V + + A + H G +T AG P +
Sbjct: 258 WAGLGRIDEG------DDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVV 309
Query: 371 WPSFADQQINSRFVGEVWKLG----LDIKDLCDRNIVEKAVNDLMVERKEEFMESADRMA 426
P ADQ + V + LG D ++ A+ + A +A
Sbjct: 310 VPQKADQPYYAGRVAD---LGVGVAHDGPTPTVESLSA-ALATAL---TPGIRARAAAVA 362
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 Length = 415 | Back alignment and structure |
|---|
Score = 57.2 bits (138), Expect = 4e-09
Identities = 60/443 (13%), Positives = 113/443 (25%), Gaps = 91/443 (20%)
Query: 9 VAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQF 68
V + + G ++ LA + G + +R+ G
Sbjct: 3 VLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEV------------GVPH 50
Query: 69 KTLT----DGLPRDHPRTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSRA 124
+ + R P T + + + + A
Sbjct: 51 VPVGPSARAPIQRAKPLTAEDVRRFTT-------EAIATQFDE-------------IPAA 90
Query: 125 IDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELPIKGFLRCRDLPSFCRVNDPMDP 184
+ V + + I + IP A P ++ P
Sbjct: 91 AEGCAAVVTTGLLAAAIGVRSVAEKLGIP-YFYAFHCPS--YVPSPYYPPPPLGEPSTQD 147
Query: 185 HL---LLFARETRLSAHADGLILNTF-EDLEGPILSQIRNHS------CPNIYSIGPLNA 234
+ + R + + G +LN+ + + P + I + PL
Sbjct: 148 TIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTDHPWVAADPVLAPLQP 207
Query: 235 HLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVH 294
+ + + A+LD P +Y+ FGS+ +
Sbjct: 208 TDLDAVQTGAWILPDERPLSPELAAFLDAGPP--PVYLGFGSLGA--PADAVR------- 256
Query: 295 SKKSFLWVIRPD----LIS---GKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVG 347
+ IR ++S + G V + + A
Sbjct: 257 ---VAIDAIRAHGRRVILSRGWADLVLPDDGADCF--------AIGEVNHQVLFGRVAA- 304
Query: 348 GFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLG----LDIKDLCDRNIV 403
+ H G +T + AG P I P ADQ + V E LG D ++
Sbjct: 305 -VIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAE---LGVGVAHDGPIPTFDSLS 360
Query: 404 EKAVNDLMVERKEEFMESADRMA 426
A+ + E A +A
Sbjct: 361 A-ALATAL---TPETHARATAVA 379
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 51.4 bits (122), Expect = 5e-07
Identities = 60/340 (17%), Positives = 111/340 (32%), Gaps = 103/340 (30%)
Query: 17 VGHVNS----MLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDA---FSRYMQIPGFQFK 69
+ + NS + L +LL I + + + + R ++ ++
Sbjct: 189 LKNCNSPETVLEMLQKLLYQ--IDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYE-N 245
Query: 70 TLTDGLPRD--HPRTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDA 127
L L + + + + F +L+C LL + K +TD + A
Sbjct: 246 CLLV-L-LNVQNAKAWNAF-----NLSCKI--LL---TTRFKQ-----VTD-----FLSA 283
Query: 128 AREVGVSIIYFRTISACAFWSFHCIPDIIDAGELPIKGFLRCR--DLPS-FCRVNDPMDP 184
A +S+ + + PD + L +K +L CR DLP N P
Sbjct: 284 ATTTHISLDHHS-------MTLT--PD--EVKSLLLK-YLDCRPQDLPREVLTTN-PR-- 328
Query: 185 HLLLFARETRLSAHADGLI-LNTFEDLEGPILSQIRNHSC----PNIY-------SIGPL 232
L + A R DGL + ++ + L+ I S P Y S+ P
Sbjct: 329 RLSIIAESIR-----DGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPP 383
Query: 233 NAHLKVRIPEKTYSSSSLW-------------KIDRSCMAWLDKQPKQSVIYV------- 272
+ IP S +W K+ + + ++KQPK+S I +
Sbjct: 384 S----AHIPTILLSL--IWFDVIKSDVMVVVNKLHKYSL--VEKQPKESTISIPSIYLEL 435
Query: 273 --SFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISG 310
+ + R +++ Y K + P +
Sbjct: 436 KVKLENEYALHR-SIVDHYNIP---KTFDSDDLIPPYLDQ 471
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 49.1 bits (116), Expect = 3e-06
Identities = 53/338 (15%), Positives = 92/338 (27%), Gaps = 113/338 (33%)
Query: 37 ITFLNTEHYYDRVIRHSSDA---------FSRYMQIPGFQFKTL----TDGLP------- 76
FL+ + H S +Y+ + L P
Sbjct: 278 TDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCR---PQDLPREVLTTNPRRLSIIA 334
Query: 77 ---RDHPRTPD--------KFPELVD-SLNCATPPLLKEMVSDSKSPVNCIITDGYMSRA 124
RD T D K +++ SLN P ++M + +
Sbjct: 335 ESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKM---------------FDRLS 379
Query: 125 IDAAREVGVSIIYFRT---ISA---CAFW---SFHCIPDIIDAGELPIKGFLRCRDLPSF 175
+ F I W + +++ +L + + S
Sbjct: 380 V------------FPPSAHIPTILLSLIWFDVIKSDVMVVVN--KLHKYSLVEKQPKEST 425
Query: 176 CRVNDPMDPHL-LLFARETRLSAHADGLILNTFE-----DLEGPILSQIRNHSCPNIYS- 228
+ +L L E + H I++ + D + I + + YS
Sbjct: 426 ISI---PSIYLELKVKLENEYALHR--SIVDHYNIPKTFDSDDLIPPYLDQY----FYSH 476
Query: 229 IGPLNAHLK-VRIPEKTYSSSSL-----W---KIDRSCMAWLDKQPKQSVI-----YVSF 274
IG HLK + PE+ + + KI AW + + Y +
Sbjct: 477 IG---HHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPY 533
Query: 275 GSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKD 312
I Y LV++ FL I +LI K
Sbjct: 534 --ICDNDPK-----YERLVNAILDFLPKIEENLICSKY 564
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 47.9 bits (113), Expect = 6e-06
Identities = 58/433 (13%), Positives = 114/433 (26%), Gaps = 127/433 (29%)
Query: 67 QFKTLTDGLPRDHPRTPDKF---PELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYM-- 121
+ D L D+ + L A L E+ P ++ DG +
Sbjct: 111 MYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQA----LLEL-----RPAKNVLIDG-VLG 160
Query: 122 ----SRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELPIKGFLRCRDLPSFCR 177
A+D V I FW ++ C
Sbjct: 161 SGKTWVALDVCLSYKVQCKMDFKI----FW--------LNLK--------NCNS------ 194
Query: 178 VNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPNIYSIGPLNAHLK 237
P +L +L P + +HS I + A L+
Sbjct: 195 ------PETVL-------------EMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELR 235
Query: 238 VRIPEKTYSSSSLWKIDRSCMAWLDK-QPKQSVIYVSFGS-IAVMSRDQLIEFYYGLVHS 295
+ K Y + L + L Q ++ + I + +R + + + +
Sbjct: 236 RLLKSKPYENCLL--V-------LLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATT 286
Query: 296 KKSFLWVIRPDLISGKDGENQIPEELLEA-TKERGCIAGWVPQEEV----LAHSAVGGFL 350
L P+E+ K C +P+E + S + +
Sbjct: 287 T-------HISLDHHSMTLT--PDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESI 337
Query: 351 TH--CGWN-----------STLESIVAGM-PMI---CWPSFA----DQQINSRFVGEVWK 389
W+ + +ES + + P + + I + + +W
Sbjct: 338 RDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIW- 396
Query: 390 LGLDIKDLCDRNIVEKAVNDLMVER--KE----------EFMESADRMANLAKKSVNK-- 435
D+ +V K +VE+ KE E + L + V+
Sbjct: 397 --FDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYN 454
Query: 436 GGSSYCNLDRLVN 448
++ + D +
Sbjct: 455 IPKTFDSDDLIPP 467
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 42.9 bits (100), Expect = 2e-04
Identities = 41/317 (12%), Positives = 90/317 (28%), Gaps = 92/317 (29%)
Query: 150 HCIPDIIDAGELPIKGFLRCRDLPSFCR---VNDPMDPHLLLFARETRLSAHADGLILNT 206
+ DI+ E C+D+ + + +D ++ + + T
Sbjct: 16 YQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTL-----RLFWT 70
Query: 207 FEDLEGPILSQIRNHSCPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPK 266
+ ++ + + L Y + + + +QP
Sbjct: 71 LLSKQEEMVQKF-------------VEEVL-----RINYK----FLMSP--IKTEQRQP- 105
Query: 267 QSVIYVSFGSIAVMSRDQLIEFYYGLVHS-KKSFLWVIRPDLISGKDGENQIPEELLEAT 325
S++ + RD+L Y K V R ++ + LLE
Sbjct: 106 -SMMTRMYIE----QRDRL----YNDNQVFAKYN--VSRLQPY------LKLRQALLELR 148
Query: 326 KERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVG 385
+ VL +G G + + V ++ +
Sbjct: 149 PAKN----------VLIDGVLG-----SG-KTWVALDVC----------LSYKVQCKMDF 182
Query: 386 EV-W-KLGLDIKDLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNL 443
++ W L ++E + L+ + + +D +N+ K ++ S L
Sbjct: 183 KIFWLNLK---NCNSPETVLEM-LQKLLYQIDPNWTSRSDHSSNI-KLRIH---SIQAEL 234
Query: 444 DRLVNDIKMMSSQPQNC 460
RL + S +NC
Sbjct: 235 RRL-----LKSKPYENC 246
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 460 | |||
| 3hbf_A | 454 | Flavonoid 3-O-glucosyltransferase; glycosyltransfe | 100.0 | |
| 2pq6_A | 482 | UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl | 100.0 | |
| 2vch_A | 480 | Hydroquinone glucosyltransferase; glycosyltransfer | 100.0 | |
| 2c1x_A | 456 | UDP-glucose flavonoid 3-O glycosyltransferase; WIN | 100.0 | |
| 2acv_A | 463 | Triterpene UDP-glucosyl transferase UGT71G1; glyco | 100.0 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 100.0 | |
| 4amg_A | 400 | Snogd; transferase, polyketide biosynthesis, GT1 f | 100.0 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 100.0 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 100.0 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 100.0 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 100.0 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 100.0 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 100.0 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 100.0 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 100.0 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 100.0 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 100.0 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 100.0 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 100.0 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 99.97 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 99.94 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.87 | |
| 3hbm_A | 282 | UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je | 99.69 | |
| 2jzc_A | 224 | UDP-N-acetylglucosamine transferase subunit ALG13; | 99.62 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.47 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.47 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 99.47 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.44 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 99.4 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 99.33 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.33 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 99.32 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.32 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 99.26 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 99.21 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 99.17 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 99.13 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 99.11 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 99.04 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 98.72 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 98.63 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 98.61 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 98.6 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 98.44 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 98.43 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 98.41 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 98.25 | |
| 1psw_A | 348 | ADP-heptose LPS heptosyltransferase II; structural | 97.84 | |
| 3tov_A | 349 | Glycosyl transferase family 9; structural genomics | 97.83 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 97.55 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 97.55 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 97.48 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 97.4 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 97.39 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 95.27 | |
| 3ty2_A | 261 | 5'-nucleotidase SURE; surviVal protein, phosphatas | 95.04 | |
| 2phj_A | 251 | 5'-nucleotidase SURE; SURE protein, putative acid | 94.76 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 94.32 | |
| 2wqk_A | 251 | 5'-nucleotidase SURE; SURE protein, putative acid | 93.61 | |
| 1j9j_A | 247 | Stationary phase surviVal protein; SURE protein, u | 90.2 | |
| 2e6c_A | 244 | 5'-nucleotidase SURE; SURE protein, cowith mangane | 89.78 | |
| 3rfo_A | 317 | Methionyl-tRNA formyltransferase; structural genom | 88.99 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 88.8 | |
| 1l5x_A | 280 | SurviVal protein E; structural genomics, putative | 88.66 | |
| 3qxc_A | 242 | Dethiobiotin synthetase; DTBS, structural genomics | 88.14 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 87.93 | |
| 2ywr_A | 216 | Phosphoribosylglycinamide formyltransferase; rossm | 87.55 | |
| 3auf_A | 229 | Glycinamide ribonucleotide transformylase 1; struc | 86.92 | |
| 4dim_A | 403 | Phosphoribosylglycinamide synthetase; structural g | 86.9 | |
| 3zqu_A | 209 | Probable aromatic acid decarboxylase; lyase; HET: | 85.85 | |
| 2bw0_A | 329 | 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase | 85.39 | |
| 1ccw_A | 137 | Protein (glutamate mutase); coenzyme B12, radical | 85.05 | |
| 2v4n_A | 254 | Multifunctional protein SUR E; hydrolase, surviVal | 84.94 | |
| 3av3_A | 212 | Phosphoribosylglycinamide formyltransferase; struc | 84.08 | |
| 3fgn_A | 251 | Dethiobiotin synthetase; biotin biosynthesis, BIOD | 83.8 | |
| 3iqw_A | 334 | Tail-anchored protein targeting factor GET3; ATPas | 83.64 | |
| 3q0i_A | 318 | Methionyl-tRNA formyltransferase; structural genom | 83.16 | |
| 3igf_A | 374 | ALL4481 protein; two-domained protein consisting o | 82.89 | |
| 1kjn_A | 157 | MTH0777; hypotethical protein, structural genomics | 82.85 | |
| 2ejb_A | 189 | Probable aromatic acid decarboxylase; phenylacryli | 82.48 | |
| 2q5c_A | 196 | NTRC family transcriptional regulator; structural | 82.44 | |
| 3q9l_A | 260 | Septum site-determining protein MIND; ATPase, bact | 82.37 | |
| 4dzz_A | 206 | Plasmid partitioning protein PARF; deviant walker | 82.21 | |
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 82.0 | |
| 1sbz_A | 197 | Probable aromatic acid decarboxylase; FMN binding, | 81.29 |
| >3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-66 Score=506.76 Aligned_cols=426 Identities=26% Similarity=0.452 Sum_probs=340.9
Q ss_pred CCCCCCcEEEEEcCCCCCCHHHHHHHHHHHHhCC--CeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCC
Q 012587 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHAG--IKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRD 78 (460)
Q Consensus 1 ~~~~~~~~il~~~~~~~Gh~~p~l~La~~L~~rG--H~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (460)
|+..++.||+++|+|++||++|++.||+.|+++| +.|||++++.+...+.+..+.. .++++|..+|++++++
T Consensus 8 M~~~~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~~~------~~~i~~~~ipdglp~~ 81 (454)
T 3hbf_A 8 MNGNNLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSNEF------LPNIKYYNVHDGLPKG 81 (454)
T ss_dssp ----CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSSCC------CTTEEEEECCCCCCTT
T ss_pred ccCCCCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccccC------CCCceEEecCCCCCCC
Confidence 3444568999999999999999999999999999 9999999976666664432110 2469999999998876
Q ss_pred CCCCCCChHHHHHHHHhhCcHHHHHHHHcC----CCCccEEEEcCCcchHHHHHHHhCCceEEEecchhHHHHHHhhccc
Q 012587 79 HPRTPDKFPELVDSLNCATPPLLKEMVSDS----KSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPD 154 (460)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~ 154 (460)
.... .+....+..+...+.+.+++.++++ ..++|+||+|.++.|+..+|+++|||++.++++++.....+.+++.
T Consensus 82 ~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~ 160 (454)
T 3hbf_A 82 YVSS-GNPREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDL 160 (454)
T ss_dssp CCCC-SCTTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHH
T ss_pred cccc-CChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHH
Confidence 4322 2333334444433344445544443 3589999999999999999999999999999999888777665443
Q ss_pred cccC---------C---CCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcC
Q 012587 155 IIDA---------G---ELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHS 222 (460)
Q Consensus 155 ~~~~---------~---~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~ 222 (460)
.... . .+|....++.++++..+.. +....+...+.+......+++.+++|++++||++.++.+++ .
T Consensus 161 ~~~~~~~~~~~~~~~~~~iPg~p~~~~~dlp~~~~~-~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~-~ 238 (454)
T 3hbf_A 161 IREKTGSKEVHDVKSIDVLPGFPELKASDLPEGVIK-DIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNS-K 238 (454)
T ss_dssp HHHTCCHHHHTTSSCBCCSTTSCCBCGGGSCTTSSS-CTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHT-T
T ss_pred HHhhcCCCccccccccccCCCCCCcChhhCchhhcc-CCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHh-c
Confidence 2111 0 1222123666777766543 44455666677777777889999999999999999999998 8
Q ss_pred CCceeEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEE
Q 012587 223 CPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWV 302 (460)
Q Consensus 223 ~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~ 302 (460)
+|++++|||+........ ...++++.+||+.++++++|||||||+...+.+++..++.+++..+++|||+
T Consensus 239 ~~~v~~vGPl~~~~~~~~----------~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~ 308 (454)
T 3hbf_A 239 FKLLLNVGPFNLTTPQRK----------VSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWS 308 (454)
T ss_dssp SSCEEECCCHHHHSCCSC----------CCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEE
T ss_pred CCCEEEECCccccccccc----------ccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEE
Confidence 899999999986543211 1235678999998888999999999999888999999999999999999999
Q ss_pred EccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHH
Q 012587 303 IRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSR 382 (460)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~ 382 (460)
++++. ...+|+++.++.++|+++++|+||.+||+|+++++||||||+||++||+++|||||++|+++||+.||+
T Consensus 309 ~~~~~------~~~lp~~~~~~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~ 382 (454)
T 3hbf_A 309 FRGDP------KEKLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTI 382 (454)
T ss_dssp CCSCH------HHHSCTTHHHHTTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHH
T ss_pred eCCcc------hhcCCHhHHhhcCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHH
Confidence 96431 124778888888899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhceeeeec-CCcchHHHHHHHHHHHhH-hHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHH
Q 012587 383 FVGEVWKLGLDIK-DLCDRNIVEKAVNDLMVE-RKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIK 451 (460)
Q Consensus 383 ~~~e~~G~g~~~~-~~~~~~~l~~~i~~~l~~-~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~ 451 (460)
++++.+|+|+.+. +.+++++|+++|+++|++ ++.+||+||+++++++++++.+||+|.+++++|++.+.
T Consensus 383 ~v~~~~g~Gv~l~~~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 383 LTESVLEIGVGVDNGVLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp HHHTTSCSEEECGGGSCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHT
T ss_pred HHHHhhCeeEEecCCCCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHh
Confidence 9963369999998 589999999999999985 34489999999999999999999999999999999874
|
| >2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-62 Score=492.95 Aligned_cols=443 Identities=35% Similarity=0.702 Sum_probs=329.3
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhcccc-ccccccCCCCceEEecCCCCCCCC--C
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSD-AFSRYMQIPGFQFKTLTDGLPRDH--P 80 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~ 80 (460)
++++||+++|+|++||++|++.||++|++|||+|||++++.+.+.+.+.... .... .++++|..+++++++.. .
T Consensus 6 ~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~---~~~i~~~~l~~~lp~~~~~~ 82 (482)
T 2pq6_A 6 NRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDG---FTDFNFESIPDGLTPMEGDG 82 (482)
T ss_dssp --CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC---------------CEEEEEECCCCC------
T ss_pred CCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccC---CCceEEEECCCCCCCccccc
Confidence 4567999999999999999999999999999999999998776666443110 0000 13699999987776521 1
Q ss_pred CCCCChHHHHHHHHhhCcHHHHHHHHcC-C----CCccEEEEcCCcchHHHHHHHhCCceEEEecchhHHHHHHhhcccc
Q 012587 81 RTPDKFPELVDSLNCATPPLLKEMVSDS-K----SPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDI 155 (460)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~----~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~ 155 (460)
....++..++..+...+.+.++++++++ . .++|+||+|.++.|+..+|+++|||+|.++++++.......+++.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~ 162 (482)
T 2pq6_A 83 DVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSF 162 (482)
T ss_dssp ---CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHH
T ss_pred CcchhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHH
Confidence 1234555566666566788888888865 1 4899999999999999999999999999999988766554444433
Q ss_pred ccCCCCCCCC--------------C------ccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHH
Q 012587 156 IDAGELPIKG--------------F------LRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPIL 215 (460)
Q Consensus 156 ~~~~~~p~~~--------------~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~ 215 (460)
...++.|... + ++..+++.++..........+.+.+......+++.+++|++++||++.+
T Consensus 163 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~~~ 242 (482)
T 2pq6_A 163 VERGIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVI 242 (482)
T ss_dssp HHTTCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHHHH
T ss_pred HhcCCCCCccccccccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHhHHHH
Confidence 2233322210 0 1112222222211122334444444455567788999999999999999
Q ss_pred HHHhhcCCCceeEeCccccc-cccCCCccc-cCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHh
Q 012587 216 SQIRNHSCPNIYSIGPLNAH-LKVRIPEKT-YSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLV 293 (460)
Q Consensus 216 ~~~~~~~~~~~~~vG~~~~~-~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~ 293 (460)
+.+++ .++++++|||+... ......+.. .....+|+.+.++.+|++.++++++|||||||+...+.+.+..++.+++
T Consensus 243 ~~~~~-~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~ 321 (482)
T 2pq6_A 243 NALSS-TIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGLA 321 (482)
T ss_dssp HHHHT-TCTTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHHHH
T ss_pred HHHHH-hCCcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHHHHHHH
Confidence 99998 77999999999763 111000000 0000223345568999998778999999999998888888999999999
Q ss_pred hCCCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceecccc
Q 012587 294 HSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPS 373 (460)
Q Consensus 294 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~ 373 (460)
..+++|||+++.+... +....+|+++.++.++|+++++|+||.++|+|+++++||||||+||++||+++|||||++|+
T Consensus 322 ~~~~~~l~~~~~~~~~--~~~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P~ 399 (482)
T 2pq6_A 322 NCKKSFLWIIRPDLVI--GGSVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPF 399 (482)
T ss_dssp HTTCEEEEECCGGGST--TTGGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCC
T ss_pred hcCCcEEEEEcCCccc--cccccCcHhHHHhcCCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEEecCc
Confidence 9999999999753222 11123778888788899999999999999999999999999999999999999999999999
Q ss_pred cccchhhHHHHHhhhceeeeecCCcchHHHHHHHHHHHhH-hHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHh
Q 012587 374 FADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVE-RKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKM 452 (460)
Q Consensus 374 ~~DQ~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~~-~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~ 452 (460)
..||+.||+++++++|+|+.+.+++++++|.++|+++|+| ++.+||+||+++++.+++++.+||++.+++++|++.+..
T Consensus 400 ~~dQ~~na~~~~~~~G~g~~l~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~~ 479 (482)
T 2pq6_A 400 FADQPTDCRFICNEWEIGMEIDTNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDVLL 479 (482)
T ss_dssp STTHHHHHHHHHHTSCCEEECCSSCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHTTC
T ss_pred ccchHHHHHHHHHHhCEEEEECCCCCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHh
Confidence 9999999999954689999997679999999999999986 112799999999999999999999999999999998743
|
| >2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-59 Score=467.85 Aligned_cols=434 Identities=29% Similarity=0.466 Sum_probs=315.8
Q ss_pred CCCCCCcEEEEEcCCCCCCHHHHHHHHHHHHhC-CCeEEEEeCccc--hhHHhhccccccccccCCCCceEEecCCCCCC
Q 012587 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHA-GIKITFLNTEHY--YDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPR 77 (460)
Q Consensus 1 ~~~~~~~~il~~~~~~~Gh~~p~l~La~~L~~r-GH~Vt~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (460)
|+.++++||+++|+|++||++|+++||++|++| ||+|||++++.+ ...+.+... . . ..+++|..++....+
T Consensus 1 M~~~~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~-~--~---~~~i~~~~l~~~~~~ 74 (480)
T 2vch_A 1 MEESKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLD-S--L---PSSISSVFLPPVDLT 74 (480)
T ss_dssp -----CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC----C---CTTEEEEECCCCCCT
T ss_pred CCCCCCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhcc-c--c---CCCceEEEcCCCCCC
Confidence 777777899999999999999999999999998 999999998663 333332100 0 0 135899999864322
Q ss_pred CCCCCCCChHHHHHHHHhhCcHHHHHHHHcC--CCCc-cEEEEcCCcchHHHHHHHhCCceEEEecchhHHHHHHhhccc
Q 012587 78 DHPRTPDKFPELVDSLNCATPPLLKEMVSDS--KSPV-NCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPD 154 (460)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~p-D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~ 154 (460)
.. ....+....+......+.+.++++++++ ..++ |+||+|.++.|+..+|+++|||++.+++++......+.+++.
T Consensus 75 ~~-~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~ 153 (480)
T 2vch_A 75 DL-SSSTRIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPK 153 (480)
T ss_dssp TS-CTTCCHHHHHHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHH
T ss_pred CC-CCchhHHHHHHHHHHhhhHHHHHHHHHhccCCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHH
Confidence 11 1122343434344455677888888764 2477 999999998899999999999999999998776554433331
Q ss_pred cccC-----------CCCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhc--
Q 012587 155 IIDA-----------GELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNH-- 221 (460)
Q Consensus 155 ~~~~-----------~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~-- 221 (460)
.... ...|...-++..+++..+. .+.......+........+...+++|++++||++.+..+.+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~Pg~~p~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~~~ 231 (480)
T 2vch_A 154 LDETVSCEFRELTEPLMLPGCVPVAGKDFLDPAQ--DRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGL 231 (480)
T ss_dssp HHHHCCSCGGGCSSCBCCTTCCCBCGGGSCGGGS--CTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCCT
T ss_pred HHhcCCCcccccCCcccCCCCCCCChHHCchhhh--cCCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhccc
Confidence 1100 0011100122223332221 112234444444445556778899999999999877766530
Q ss_pred CCCceeEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEE
Q 012587 222 SCPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLW 301 (460)
Q Consensus 222 ~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~ 301 (460)
.++++++|||+....... ..+..+.++.+||+.++++++|||||||+...+.+++..++.+++..+++|||
T Consensus 232 ~~~~v~~vGpl~~~~~~~---------~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw 302 (480)
T 2vch_A 232 DKPPVYPVGPLVNIGKQE---------AKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLW 302 (480)
T ss_dssp TCCCEEECCCCCCCSCSC---------C-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCcEEEEeccccccccc---------cCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEE
Confidence 257899999998643210 00123567899999877899999999999988889999999999999999999
Q ss_pred EEccCCCCC----------CCCCCCCchHHHHHhcCCceeee-ecChHhhhcccccccccccCChhHHHHHHHhCCceec
Q 012587 302 VIRPDLISG----------KDGENQIPEELLEATKERGCIAG-WVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMIC 370 (460)
Q Consensus 302 ~~~~~~~~~----------~~~~~~~~~~~~~~~~~n~~~~~-~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~ 370 (460)
+++.....| ......+|+++.++..++.+++. |+||.+||+|+++++||||||+||++||+++|||||+
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~ 382 (480)
T 2vch_A 303 VIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIA 382 (480)
T ss_dssp EECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEE
T ss_pred EECCccccccccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEe
Confidence 997642110 00012467777766666656665 9999999999999999999999999999999999999
Q ss_pred ccccccchhhHHHHHhhhceeeeec-C---CcchHHHHHHHHHHHh-HhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHH
Q 012587 371 WPSFADQQINSRFVGEVWKLGLDIK-D---LCDRNIVEKAVNDLMV-ERKEEFMESADRMANLAKKSVNKGGSSYCNLDR 445 (460)
Q Consensus 371 ~P~~~DQ~~na~~~~e~~G~g~~~~-~---~~~~~~l~~~i~~~l~-~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~ 445 (460)
+|++.||+.||+++++++|+|+.+. . .+++++|+++|+++|+ +++++||+||+++++++++++.+||++..++++
T Consensus 383 ~P~~~DQ~~na~~l~~~~G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~~ 462 (480)
T 2vch_A 383 WPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSL 462 (480)
T ss_dssp CCCSTTHHHHHHHHHHTTCCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHH
T ss_pred ccccccchHHHHHHHHHhCeEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHH
Confidence 9999999999999755899999997 3 6899999999999998 112899999999999999988899999999999
Q ss_pred HHHHHHh
Q 012587 446 LVNDIKM 452 (460)
Q Consensus 446 ~~~~l~~ 452 (460)
|++.+..
T Consensus 463 ~v~~~~~ 469 (480)
T 2vch_A 463 VALKWKA 469 (480)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999865
|
| >2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-59 Score=466.27 Aligned_cols=427 Identities=26% Similarity=0.474 Sum_probs=313.5
Q ss_pred CCC-CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCe--EEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCC
Q 012587 1 MEK-QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIK--ITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPR 77 (460)
Q Consensus 1 ~~~-~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~--Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (460)
|++ ++++||+++|+|++||++|++.||+.|++|||+ |||++++.+.+.+.+..... . ..+++|..+++++++
T Consensus 1 m~~~~~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~~--~---~~~i~~~~i~~glp~ 75 (456)
T 2c1x_A 1 MSQTTTNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHT--M---QCNIKSYDISDGVPE 75 (456)
T ss_dssp ------CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC------------CTTEEEEECCCCCCT
T ss_pred CCCCCCCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhcccccc--C---CCceEEEeCCCCCCC
Confidence 443 456799999999999999999999999999765 57788865555443321100 0 136999999887776
Q ss_pred CCCCCCCChHHHHHHHHhhCcHHHHHHHHcC----CCCccEEEEcCCcchHHHHHHHhCCceEEEecchhHHHHHHhhcc
Q 012587 78 DHPRTPDKFPELVDSLNCATPPLLKEMVSDS----KSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIP 153 (460)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~ 153 (460)
... ........+..+...+...++++++++ +.+||+||+|.++.|+..+|+++|||+|.++++++.......+.+
T Consensus 76 ~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~ 154 (456)
T 2c1x_A 76 GYV-FAGRPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYID 154 (456)
T ss_dssp TCC-CCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHH
T ss_pred ccc-ccCChHHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhH
Confidence 532 112233333333333334444444432 248999999999999999999999999999998776544332211
Q ss_pred ccc---c--------C---CCCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHh
Q 012587 154 DII---D--------A---GELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIR 219 (460)
Q Consensus 154 ~~~---~--------~---~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~ 219 (460)
... . . ...|....++.++++..+........+...+.+......+++.+++|++++||++.++.++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~ 234 (456)
T 2c1x_A 155 EIREKIGVSGIQGREDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLK 234 (456)
T ss_dssp HHHHHHCSSCCTTCTTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHH
T ss_pred HHHhccCCcccccccccccccCCCCCcccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHHH
Confidence 100 0 0 0111111134444443322222222333333434344567889999999999999888888
Q ss_pred hcCCCceeEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcE
Q 012587 220 NHSCPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSF 299 (460)
Q Consensus 220 ~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~ 299 (460)
+ .+|++++|||+....... . +..+.++.+|++.++++++|||||||....+.+++..++.+++..+++|
T Consensus 235 ~-~~~~~~~vGpl~~~~~~~---------~-~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~ 303 (456)
T 2c1x_A 235 S-KLKTYLNIGPFNLITPPP---------V-VPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPF 303 (456)
T ss_dssp H-HSSCEEECCCHHHHC-------------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCE
T ss_pred h-cCCCEEEecCcccCcccc---------c-ccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeE
Confidence 8 778999999997643211 0 1224468899998778999999999999888888999999999999999
Q ss_pred EEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceecccccccchh
Q 012587 300 LWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQI 379 (460)
Q Consensus 300 i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~ 379 (460)
||+++.+. ...+++++.++.++|+++++|+||.++|+|+++++||||||+||++||+++|||||++|++.||+.
T Consensus 304 lw~~~~~~------~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~ 377 (456)
T 2c1x_A 304 IWSLRDKA------RVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRL 377 (456)
T ss_dssp EEECCGGG------GGGSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHH
T ss_pred EEEECCcc------hhhCCHHHHhhcCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHH
Confidence 99996431 124677777777889999999999999999998899999999999999999999999999999999
Q ss_pred hHHHHHhhh-ceeeeec-CCcchHHHHHHHHHHHhH-hHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHH
Q 012587 380 NSRFVGEVW-KLGLDIK-DLCDRNIVEKAVNDLMVE-RKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIK 451 (460)
Q Consensus 380 na~~~~e~~-G~g~~~~-~~~~~~~l~~~i~~~l~~-~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~ 451 (460)
||++++ +. |+|+.+. +.+++++|+++|+++|+| ++++||+||+++++.+++++.+||+|.+++++||+.+.
T Consensus 378 Na~~l~-~~~g~g~~l~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~ 451 (456)
T 2c1x_A 378 NGRMVE-DVLEIGVRIEGGVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVS 451 (456)
T ss_dssp HHHHHH-HTSCCEEECGGGSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHT
T ss_pred HHHHHH-HHhCeEEEecCCCcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHH
Confidence 999996 55 9999997 679999999999999986 12389999999999999999999999999999999884
|
| >2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-57 Score=450.06 Aligned_cols=421 Identities=28% Similarity=0.486 Sum_probs=315.6
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhC--CCeEEEEeCccch-----hHHhhccccccccccCCCCceEEecCCCCCC
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGHA--GIKITFLNTEHYY-----DRVIRHSSDAFSRYMQIPGFQFKTLTDGLPR 77 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~r--GH~Vt~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (460)
+++||+++|+|++||++|++.||+.|++| ||+|||++++.+. ..+.+... . .++++|..+|++..+
T Consensus 8 ~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~----~---~~~i~~~~lp~~~~~ 80 (463)
T 2acv_A 8 KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLA----S---QPQIQLIDLPEVEPP 80 (463)
T ss_dssp HCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHC----S---CTTEEEEECCCCCCC
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhccc----C---CCCceEEECCCCCCC
Confidence 45799999999999999999999999999 9999999987653 12221000 0 246999999875211
Q ss_pred CCCCCCCChHHHHHHHHhhCcHHHHHHHHcC-CCCccEEEEcCCcchHHHHHHHhCCceEEEecchhHHHHHHhhccccc
Q 012587 78 DHPRTPDKFPELVDSLNCATPPLLKEMVSDS-KSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDII 156 (460)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 156 (460)
.. +...+....+......+.+.++++++++ ..+||+||+|.++.|+..+|+++|||++.+++++......+.+++...
T Consensus 81 ~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 159 (463)
T 2acv_A 81 PQ-ELLKSPEFYILTFLESLIPHVKATIKTILSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQ 159 (463)
T ss_dssp CG-GGGGSHHHHHHHHHHHTHHHHHHHHHHHCCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSC
T ss_pred cc-cccCCccHHHHHHHHhhhHHHHHHHHhccCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhc
Confidence 11 0011111113333445777888888773 238999999999889999999999999999998887766554444221
Q ss_pred cC------------CCCCCC-CCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcC-
Q 012587 157 DA------------GELPIK-GFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHS- 222 (460)
Q Consensus 157 ~~------------~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~- 222 (460)
.. ...|.. ..++..+++..+.. + ......+........+++.+++|++++||++..+.+.+..
T Consensus 160 ~~~~~~~~~~~~~~~~~pg~~~~~~~~~l~~~~~~--~-~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~~~ 236 (463)
T 2acv_A 160 IEEVFDDSDRDHQLLNIPGISNQVPSNVLPDACFN--K-DGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDE 236 (463)
T ss_dssp TTCCCCCSSGGGCEECCTTCSSCEEGGGSCHHHHC--T-TTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHCT
T ss_pred ccCCCCCccccCceeECCCCCCCCChHHCchhhcC--C-chHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHhccc
Confidence 00 001110 01122222222211 1 2244444444555677888999999999998877766512
Q ss_pred -CCceeEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcc-cCCHHHHHHHHHHHhhCCCcEE
Q 012587 223 -CPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIA-VMSRDQLIEFYYGLVHSKKSFL 300 (460)
Q Consensus 223 -~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~-~~~~~~~~~~~~al~~~~~~~i 300 (460)
.+++++|||+.......... ..+..+.++.+|++.++++++|||||||+. ..+.+++..++.+++..+++||
T Consensus 237 p~~~v~~vGpl~~~~~~~~~~------~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l 310 (463)
T 2acv_A 237 KIPPIYAVGPLLDLKGQPNPK------LDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFL 310 (463)
T ss_dssp TSCCEEECCCCCCSSCCCBTT------BCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEE
T ss_pred cCCcEEEeCCCcccccccccc------cccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEE
Confidence 57899999998643100000 001234678999998778999999999999 7788889999999999999999
Q ss_pred EEEccCCCCCCCCCCCCchHHHHHh--cCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceecccccccch
Q 012587 301 WVIRPDLISGKDGENQIPEELLEAT--KERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQ 378 (460)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~ 378 (460)
|+++.+ ...+|+++.++. ++|+++++|+||.++|+|+++++||||||+||++||+++|||||++|++.||+
T Consensus 311 ~~~~~~-------~~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~ 383 (463)
T 2acv_A 311 WSNSAE-------KKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQ 383 (463)
T ss_dssp EECCCC-------GGGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHH
T ss_pred EEECCC-------cccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhH
Confidence 999632 013667776666 78999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHhhhceeeee-c----C--CcchHHHHHHHHHHHh-HhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Q 012587 379 INSRFVGEVWKLGLDI-K----D--LCDRNIVEKAVNDLMV-ERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDI 450 (460)
Q Consensus 379 ~na~~~~e~~G~g~~~-~----~--~~~~~~l~~~i~~~l~-~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l 450 (460)
.||+++++++|+|+.+ . + .+++++|.++|+++|+ + ++||+||+++++.+++++.+||++.+++++||+.+
T Consensus 384 ~Na~~lv~~~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~--~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~ 461 (463)
T 2acv_A 384 LNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKD--SIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDI 461 (463)
T ss_dssp HHHHHHHHTSCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTT--CTHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCeEEEEecccCCCCccccHHHHHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHh
Confidence 9999953589999999 2 3 6899999999999997 4 78999999999999999999999999999999998
Q ss_pred H
Q 012587 451 K 451 (460)
Q Consensus 451 ~ 451 (460)
.
T Consensus 462 ~ 462 (463)
T 2acv_A 462 T 462 (463)
T ss_dssp H
T ss_pred c
Confidence 5
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-45 Score=362.02 Aligned_cols=388 Identities=17% Similarity=0.216 Sum_probs=263.9
Q ss_pred CCCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCC-
Q 012587 3 KQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPR- 81 (460)
Q Consensus 3 ~~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 81 (460)
+|+||||+|+++|++||++|+++||++|+++||+|+|++++.+.+.+... +++|..++..++.....
T Consensus 9 ~m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~~------------g~~~~~~~~~~~~~~~~~ 76 (424)
T 2iya_A 9 SVTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAA------------GATPVVYDSILPKESNPE 76 (424)
T ss_dssp --CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH------------TCEEEECCCCSCCTTCTT
T ss_pred CcccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHhC------------CCEEEecCccccccccch
Confidence 36789999999999999999999999999999999999997776665543 37888887654432111
Q ss_pred --CCCChHHHHHHHHh---hCcHHHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEEEecchhHHHHHHhhcc---
Q 012587 82 --TPDKFPELVDSLNC---ATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIP--- 153 (460)
Q Consensus 82 --~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~--- 153 (460)
...+....+..+.. ...+.+.+++++. +||+||+|.++.++..+|+.+|||++.+++.+.........++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~ 154 (424)
T 2iya_A 77 ESWPEDQESAMGLFLDEAVRVLPQLEDAYADD--RPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAVQ 154 (424)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHHHHHTTTS--CCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGGGS
T ss_pred hhcchhHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCEEEEcCcccHHHHHHHhcCCCEEEEeccccccccccccccccc
Confidence 12233333322222 2334455555554 9999999998889999999999999999877541110000000
Q ss_pred -ccccCCC---CCCCCCccCCCCCCcccCCCCCChHHHHHHHHhh----------hhcCCCEEEEcChhhhchhHHHHHh
Q 012587 154 -DIIDAGE---LPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETR----------LSAHADGLILNTFEDLEGPILSQIR 219 (460)
Q Consensus 154 -~~~~~~~---~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~~~~le~p~~~~~~ 219 (460)
.....+. .|.. ..+...............+.+..... ....++.++++++++|+++. +
T Consensus 155 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~~----~ 226 (424)
T 2iya_A 155 DPTADRGEEAAAPAG----TGDAEEGAEAEDGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIKG----D 226 (424)
T ss_dssp CCCC-------------------------HHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTTG----G
T ss_pred ccccccccccccccc----cccchhhhccchhHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCCc----c
Confidence 0000000 0000 00000000000000000011111111 11146678999999888752 2
Q ss_pred hcCCCceeEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcE
Q 012587 220 NHSCPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSF 299 (460)
Q Consensus 220 ~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~ 299 (460)
. ..+++++|||+..... +..+|++.++++++|||++||......+.+..++++++..+.++
T Consensus 227 ~-~~~~~~~vGp~~~~~~------------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~ 287 (424)
T 2iya_A 227 T-VGDNYTFVGPTYGDRS------------------HQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHV 287 (424)
T ss_dssp G-CCTTEEECCCCCCCCG------------------GGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEE
T ss_pred C-CCCCEEEeCCCCCCcc------------------cCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEE
Confidence 2 4468999999764211 12247765567899999999998666788889999999888899
Q ss_pred EEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceecccccccchh
Q 012587 300 LWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQI 379 (460)
Q Consensus 300 i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~ 379 (460)
+|.++.+. . .+.+ +..++|+.+.+|+||.++|+++++ ||||||+||++||+++|||+|++|...||+.
T Consensus 288 ~~~~g~~~--------~-~~~~-~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~ 355 (424)
T 2iya_A 288 VLSVGRFV--------D-PADL-GEVPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQTM 355 (424)
T ss_dssp EEECCTTS--------C-GGGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHH
T ss_pred EEEECCcC--------C-hHHh-ccCCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCccchHH
Confidence 88875321 0 1111 114679999999999999999997 9999999999999999999999999999999
Q ss_pred hHHHHHhhhceeeeec-CCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHH
Q 012587 380 NSRFVGEVWKLGLDIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIK 451 (460)
Q Consensus 380 na~~~~e~~G~g~~~~-~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~ 451 (460)
||++++ +.|+|+.+. ++++.++|.++|+++|+| ++++++++++++++++. +. ...+.+.|+.+.
T Consensus 356 na~~l~-~~g~g~~~~~~~~~~~~l~~~i~~ll~~--~~~~~~~~~~~~~~~~~----~~-~~~~~~~i~~~~ 420 (424)
T 2iya_A 356 NAERIV-ELGLGRHIPRDQVTAEKLREAVLAVASD--PGVAERLAAVRQEIREA----GG-ARAAADILEGIL 420 (424)
T ss_dssp HHHHHH-HTTSEEECCGGGCCHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHTS----CH-HHHHHHHHHHHH
T ss_pred HHHHHH-HCCCEEEcCcCCCCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHhc----Cc-HHHHHHHHHHHH
Confidence 999994 789999997 678999999999999998 89999999999998873 33 333445555543
|
| >4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=356.95 Aligned_cols=355 Identities=12% Similarity=0.148 Sum_probs=229.8
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCC------C
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPR------D 78 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 78 (460)
+.|||+|+++|++||++|+++||++|++|||+|||++++.+.+ +.+. ++.+..+...... .
T Consensus 21 ~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~-~~~~------------g~~~~~~~~~~~~~~~~~~~ 87 (400)
T 4amg_A 21 QSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRA-VAEA------------GLCAVDVSPGVNYAKLFVPD 87 (400)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHH-HHTT------------TCEEEESSTTCCSHHHHSCC
T ss_pred CCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhh-HHhc------------CCeeEecCCchhHhhhcccc
Confidence 4589999999999999999999999999999999999866544 4333 2444444322111 0
Q ss_pred ---C---CC-CCCCh---HHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEEEecchhHHHHH
Q 012587 79 ---H---PR-TPDKF---PELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWS 148 (460)
Q Consensus 79 ---~---~~-~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~ 148 (460)
. .. ..... ...+..........+.++++++ +||+||+|.++.++..+|+.+|||++.+...+......
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~ 165 (400)
T 4amg_A 88 DTDVTDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARSW--RPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPG 165 (400)
T ss_dssp C------------CHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHH
T ss_pred ccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCEEEECcchHHHHHHHHHcCCCceeecccccccccc
Confidence 0 00 00111 1112222222344556667776 99999999999999999999999999987654332111
Q ss_pred HhhccccccCCCCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhh-hcC-CCEEEEcChhhhchhHHHHHhh--cCCC
Q 012587 149 FHCIPDIIDAGELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRL-SAH-ADGLILNTFEDLEGPILSQIRN--HSCP 224 (460)
Q Consensus 149 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~l~~~~~~le~p~~~~~~~--~~~~ 224 (460)
...... . ........... ... ....+....+. .....+ ...+
T Consensus 166 ~~~~~~----------------------------~-~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 211 (400)
T 4amg_A 166 LGALIR----------------------------R-AMSKDYERHGVTGEPTGSVRLTTTPPS-----VEALLPEDRRSP 211 (400)
T ss_dssp HHHHHH----------------------------H-HTHHHHHHTTCCCCCSCEEEEECCCHH-----HHHTSCGGGCCT
T ss_pred hhhHHH----------------------------H-HHHHHHHHhCCCcccccchhhcccCch-----hhccCcccccCC
Confidence 110000 0 00000001010 011 11122222111 111111 0112
Q ss_pred ceeEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCH--HHHHHHHHHHhhCCCcEEEE
Q 012587 225 NIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSR--DQLIEFYYGLVHSKKSFLWV 302 (460)
Q Consensus 225 ~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~--~~~~~~~~al~~~~~~~i~~ 302 (460)
....+.+.... ....+.+|++..+++++|||||||+...+. ..+..++++++..+.+++|.
T Consensus 212 ~~~~~~~~~~~-----------------~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~ 274 (400)
T 4amg_A 212 GAWPMRYVPYN-----------------GGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLT 274 (400)
T ss_dssp TCEECCCCCCC-----------------CCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEE
T ss_pred cccCccccccc-----------------ccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEE
Confidence 22323222211 122244688878899999999999875443 56788899999999999998
Q ss_pred EccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHH
Q 012587 303 IRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSR 382 (460)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~ 382 (460)
.++.... .... .++|+++.+|+||.++|+++++ ||||||+||++||+++|||+|++|+..||+.||+
T Consensus 275 ~~~~~~~------~~~~-----~~~~v~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~ 341 (400)
T 4amg_A 275 LGGGDLA------LLGE-----LPANVRVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRD 341 (400)
T ss_dssp CCTTCCC------CCCC-----CCTTEEEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC---CHHHHH
T ss_pred ecCcccc------cccc-----CCCCEEEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcccHHHHHH
Confidence 8643211 1111 5679999999999999999997 9999999999999999999999999999999999
Q ss_pred HHHhhhceeeeec-CCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Q 012587 383 FVGEVWKLGLDIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDI 450 (460)
Q Consensus 383 ~~~e~~G~g~~~~-~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l 450 (460)
++ +++|+|+.++ .+.++ ++|+++|+| ++||+||+++++++++. .+ -..+.+.+|.|
T Consensus 342 ~v-~~~G~g~~l~~~~~~~----~al~~lL~d--~~~r~~a~~l~~~~~~~---~~--~~~~a~~le~l 398 (400)
T 4amg_A 342 VL-TGLGIGFDAEAGSLGA----EQCRRLLDD--AGLREAALRVRQEMSEM---PP--PAETAAXLVAL 398 (400)
T ss_dssp HH-HHHTSEEECCTTTCSH----HHHHHHHHC--HHHHHHHHHHHHHHHTS---CC--HHHHHHHHHHH
T ss_pred HH-HHCCCEEEcCCCCchH----HHHHHHHcC--HHHHHHHHHHHHHHHcC---CC--HHHHHHHHHHh
Confidence 99 4789999997 45554 467789999 99999999999999975 33 23445666655
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-42 Score=341.33 Aligned_cols=382 Identities=14% Similarity=0.128 Sum_probs=251.3
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCCCCCh
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPDKF 86 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (460)
|||+|++.|+.||++|+++||++|++|||+|+|++++.+.+.+.+. +++|..++..............
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~------------g~~~~~i~~~~~~~~~~~~~~~ 68 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEV------------GVPHVPVGPSARAPIQRAKPLT 68 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT------------TCCEEECCC-------CCSCCC
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHc------------CCeeeeCCCCHHHHhhcccccc
Confidence 6999999999999999999999999999999999997755444432 3777777754321110011111
Q ss_pred HHHHHHHHh-hCcHHHHHHHHcCCCCccEEEEcC-Ccch--HHHHHHHhCCceEEEecchhHHHHHHhhccccccCCCCC
Q 012587 87 PELVDSLNC-ATPPLLKEMVSDSKSPVNCIITDG-YMSR--AIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELP 162 (460)
Q Consensus 87 ~~~~~~~~~-~~~~~l~~~~~~~~~~pD~vv~D~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p 162 (460)
...+..+.. .....++++.+. ..+||+||+|. +..+ +..+|+++|||+|.+.+++...... ++|.... + .+
T Consensus 69 ~~~~~~~~~~~~~~~~~~l~~~-~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~--~~p~~~~-~-~~ 143 (415)
T 1iir_A 69 AEDVRRFTTEAIATQFDEIPAA-AEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPSP--YYPPPPL-G-EP 143 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-TTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCCS--SSCCCC------
T ss_pred hHHHHHHHHHHHHHHHHHHHHH-hcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCCc--ccCCccC-C-cc
Confidence 112222211 112334444431 24999999997 5668 8999999999999998876432110 1111000 0 00
Q ss_pred CCCCccCCCCCCcccCCCC----CChHHHHHHHHhhh---------hcCCCEEEEcChhhhch-hHHHHHhhcCCCceeE
Q 012587 163 IKGFLRCRDLPSFCRVNDP----MDPHLLLFARETRL---------SAHADGLILNTFEDLEG-PILSQIRNHSCPNIYS 228 (460)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~---------~~~~~~~l~~~~~~le~-p~~~~~~~~~~~~~~~ 228 (460)
... .+..+.......... .............. .... ..++++++.|++ + ++ .+ ++++
T Consensus 144 ~~~-~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~~-----~~-~~-~~~~ 214 (415)
T 1iir_A 144 STQ-DTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPVLAPLQ-----PT-DL-DAVQ 214 (415)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTTTSCCC-----CC-SS-CCEE
T ss_pred ccc-hHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChhhcCCC-----cc-cC-CeEe
Confidence 000 000000000000000 00000000100000 0112 578899888887 4 33 44 8999
Q ss_pred eCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEccCCC
Q 012587 229 IGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLI 308 (460)
Q Consensus 229 vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~ 308 (460)
|||+...... ..+.++.+|++. ++++|||++||.. .....++.++++++..+.+++|+++.+..
T Consensus 215 vG~~~~~~~~-------------~~~~~~~~~l~~--~~~~v~v~~Gs~~-~~~~~~~~~~~al~~~~~~~v~~~g~~~~ 278 (415)
T 1iir_A 215 TGAWILPDER-------------PLSPELAAFLDA--GPPPVYLGFGSLG-APADAVRVAIDAIRAHGRRVILSRGWADL 278 (415)
T ss_dssp CCCCCCCCCC-------------CCCHHHHHHHHT--SSCCEEEECC----CCHHHHHHHHHHHHHTTCCEEECTTCTTC
T ss_pred eCCCccCccc-------------CCCHHHHHHHhh--CCCeEEEeCCCCC-CcHHHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence 9999764221 234568899985 4589999999987 56778888999999999999998754311
Q ss_pred CCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHHHHHhhh
Q 012587 309 SGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVW 388 (460)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~ 388 (460)
.. . ..++|+.+.+|+||.++|+++++ ||||||+||++||+++|||+|++|...||..||+++ ++.
T Consensus 279 -------~~-~----~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l-~~~ 343 (415)
T 1iir_A 279 -------VL-P----DDGADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRV-AEL 343 (415)
T ss_dssp -------CC-S----SCGGGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH-HHH
T ss_pred -------cc-c----CCCCCEEEeCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCCCEEECCCCCccHHHHHHH-HHC
Confidence 11 1 13468999999999999988887 999999999999999999999999999999999999 588
Q ss_pred ceeeeec-CCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHhh
Q 012587 389 KLGLDIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKMM 453 (460)
Q Consensus 389 G~g~~~~-~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~~ 453 (460)
|+|+.++ ++++.++|.++|+++ +| +++++++++++++++. ......+.+.++.+..+
T Consensus 344 g~g~~~~~~~~~~~~l~~~i~~l-~~--~~~~~~~~~~~~~~~~-----~~~~~~~~~~i~~~~~~ 401 (415)
T 1iir_A 344 GVGVAHDGPIPTFDSLSAALATA-LT--PETHARATAVAGTIRT-----DGAAVAARLLLDAVSRE 401 (415)
T ss_dssp TSEEECSSSSCCHHHHHHHHHHH-TS--HHHHHHHHHHHHHSCS-----CHHHHHHHHHHHHHHTC
T ss_pred CCcccCCcCCCCHHHHHHHHHHH-cC--HHHHHHHHHHHHHHhh-----cChHHHHHHHHHHHHhc
Confidence 9999997 678999999999999 98 9999999999988764 22345556666666544
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-42 Score=339.15 Aligned_cols=369 Identities=14% Similarity=0.092 Sum_probs=251.6
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCC-CCCC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPR-TPDK 85 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 85 (460)
|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+.+. +++|..++......... ....
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~------------g~~~~~~~~~~~~~~~~~~~~~ 68 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEV------------GVPHVPVGLPQHMMLQEGMPPP 68 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH------------TCCEEECSCCGGGCCCTTSCCC
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc------------CCeeeecCCCHHHHHhhccccc
Confidence 6999999999999999999999999999999999997655555443 37777776532111000 0111
Q ss_pred hHHHHHHHHhhC-cHHHHHHHHcCCCCccEEEEcC-Ccch--HHHHHHHhCCceEEEecchhHHHHHHhhccccccCCCC
Q 012587 86 FPELVDSLNCAT-PPLLKEMVSDSKSPVNCIITDG-YMSR--AIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGEL 161 (460)
Q Consensus 86 ~~~~~~~~~~~~-~~~l~~~~~~~~~~pD~vv~D~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (460)
....+..+.... ...++.+.+. ..+||+||+|. +..+ +..+|+.+|||+|.+.+++..... .+++ +.. + .
T Consensus 69 ~~~~~~~~~~~~~~~~~~~l~~~-~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~~--~~~p-~~~-~-~ 142 (416)
T 1rrv_A 69 PPEEEQRLAAMTVEMQFDAVPGA-AEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLAS--PHLP-PAY-D-E 142 (416)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHH-TTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCC--SSSC-CCB-C-S
T ss_pred hhHHHHHHHHHHHHHHHHHHHHH-hcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCCC--cccC-CCC-C-C
Confidence 111222222111 2222333221 24999999996 3456 899999999999998877533211 0111 000 0 0
Q ss_pred CCCCCccCCCCCCcccCCCCCChHH----------------HHHHHHh---------hhhcCCCEEEEcChhhhchhHHH
Q 012587 162 PIKGFLRCRDLPSFCRVNDPMDPHL----------------LLFARET---------RLSAHADGLILNTFEDLEGPILS 216 (460)
Q Consensus 162 p~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~---------~~~~~~~~~l~~~~~~le~p~~~ 216 (460)
+.. +. ...+... ..+.... ...... .+++++.+.|+++
T Consensus 143 ~~~--------~~-----r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~--- 205 (416)
T 1rrv_A 143 PTT--------PG-----VTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPVLAPL--- 205 (416)
T ss_dssp CCC--------TT-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTTTSCC---
T ss_pred CCC--------ch-----HHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCccccCC---
Confidence 000 00 0000000 0011001 011122 5788988888865
Q ss_pred HHhhcCCCceeEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCccc-CCHHHHHHHHHHHhhC
Q 012587 217 QIRNHSCPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAV-MSRDQLIEFYYGLVHS 295 (460)
Q Consensus 217 ~~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~-~~~~~~~~~~~al~~~ 295 (460)
++ .+ ++++|||+...... ..+.++.+|++. ++++|||++||... .....+..++++++..
T Consensus 206 --~~-~~-~~~~vG~~~~~~~~-------------~~~~~~~~~l~~--~~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~ 266 (416)
T 1rrv_A 206 --QP-DV-DAVQTGAWLLSDER-------------PLPPELEAFLAA--GSPPVHIGFGSSSGRGIADAAKVAVEAIRAQ 266 (416)
T ss_dssp --CS-SC-CCEECCCCCCCCCC-------------CCCHHHHHHHHS--SSCCEEECCTTCCSHHHHHHHHHHHHHHHHT
T ss_pred --CC-CC-CeeeECCCccCccC-------------CCCHHHHHHHhc--CCCeEEEecCCCCccChHHHHHHHHHHHHHC
Confidence 33 44 79999999764221 235568899975 45899999999864 3346678899999999
Q ss_pred CCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceecccccc
Q 012587 296 KKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFA 375 (460)
Q Consensus 296 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~ 375 (460)
+.+++|+++.... .. . ..++|+.+.+|+||.++|+++++ ||||||+||++||+++|||+|++|...
T Consensus 267 ~~~~v~~~g~~~~-------~~-~----~~~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~ 332 (416)
T 1rrv_A 267 GRRVILSRGWTEL-------VL-P----DDRDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLVIPRNT 332 (416)
T ss_dssp TCCEEEECTTTTC-------CC-S----CCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSB
T ss_pred CCeEEEEeCCccc-------cc-c----CCCCCEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcCCCEEEccCCC
Confidence 9999998864310 11 1 14579999999999999998887 999999999999999999999999999
Q ss_pred cchhhHHHHHhhhceeeeec-CCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHH-HHHHhh
Q 012587 376 DQQINSRFVGEVWKLGLDIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLV-NDIKMM 453 (460)
Q Consensus 376 DQ~~na~~~~e~~G~g~~~~-~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~-~~l~~~ 453 (460)
||+.||+++ ++.|+|+.+. ++.+.+.|.++|+++ +| +++++++++++++++. .+.. .+.+.+ +.+..+
T Consensus 333 dQ~~na~~l-~~~g~g~~~~~~~~~~~~l~~~i~~l-~~--~~~~~~~~~~~~~~~~----~~~~--~~~~~i~e~~~~~ 402 (416)
T 1rrv_A 333 DQPYFAGRV-AALGIGVAHDGPTPTFESLSAALTTV-LA--PETRARAEAVAGMVLT----DGAA--AAADLVLAAVGRE 402 (416)
T ss_dssp THHHHHHHH-HHHTSEEECSSSCCCHHHHHHHHHHH-TS--HHHHHHHHHHTTTCCC----CHHH--HHHHHHHHHHHC-
T ss_pred CcHHHHHHH-HHCCCccCCCCCCCCHHHHHHHHHHh-hC--HHHHHHHHHHHHHHhh----cCcH--HHHHHHHHHHhcc
Confidence 999999999 5789999997 678999999999999 98 9999999999988775 3333 444445 666543
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-40 Score=328.36 Aligned_cols=375 Identities=13% Similarity=0.131 Sum_probs=256.2
Q ss_pred CCCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCC-
Q 012587 3 KQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPR- 81 (460)
Q Consensus 3 ~~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 81 (460)
..+||||+|+++++.||++|+++||++|+++||+|+|++++.+.+.+.+. ++.+..++..++.....
T Consensus 17 ~~~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~~------------G~~~~~~~~~~~~~~~~~ 84 (415)
T 3rsc_A 17 GRHMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRAA------------GATVVPYQSEIIDADAAE 84 (415)
T ss_dssp --CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT------------TCEEEECCCSTTTCCHHH
T ss_pred cccCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHhc------------CCEEEeccccccccccch
Confidence 35689999999999999999999999999999999999987776666543 47888887543321100
Q ss_pred --CCCChHHH----HHHHHhhCcHHHHHHHHcCCCCccEEEEc-CCcchHHHHHHHhCCceEEEecchhHHHHHHhhccc
Q 012587 82 --TPDKFPEL----VDSLNCATPPLLKEMVSDSKSPVNCIITD-GYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPD 154 (460)
Q Consensus 82 --~~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~pD~vv~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~ 154 (460)
........ +..........+.++++++ +||+||+| ....++..+|+.+|||++.+.+....... +...+.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~-~~~~~~ 161 (415)
T 3rsc_A 85 VFGSDDLGVRPHLMYLRENVSVLRATAEALDGD--VPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEH-YSFSQD 161 (415)
T ss_dssp HHHSSSSCHHHHHHHHHHHHHHHHHHHHHHSSS--CCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSS-CCHHHH
T ss_pred hhccccHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCc-cccccc
Confidence 00011111 1111112335556666666 99999999 77778999999999999998754321100 000000
Q ss_pred cccCCCCCCCCCccCCCCCCcccCCCCCChHHHHHHH---Hh-------hhhcC-CCEEEEcChhhhchhHHHHHhhcCC
Q 012587 155 IIDAGELPIKGFLRCRDLPSFCRVNDPMDPHLLLFAR---ET-------RLSAH-ADGLILNTFEDLEGPILSQIRNHSC 223 (460)
Q Consensus 155 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------~~~~~-~~~~l~~~~~~le~p~~~~~~~~~~ 223 (460)
..+.. ....+.. .......+.. .. ..... .+..+....+.++++ +....
T Consensus 162 ~~~~~---------~~~~p~~------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~ 221 (415)
T 3rsc_A 162 MVTLA---------GTIDPLD------LPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIA-----GDTFD 221 (415)
T ss_dssp HHHHH---------TCCCGGG------CHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTT-----GGGCC
T ss_pred ccccc---------ccCChhh------HHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCC-----cccCC
Confidence 00000 0000000 0000011110 00 01111 266676666666654 33123
Q ss_pred CceeEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEE
Q 012587 224 PNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVI 303 (460)
Q Consensus 224 ~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~ 303 (460)
.++.++||+..... +..+|....+++++|||++||......+.+..++++++..+.+++|.+
T Consensus 222 ~~~~~vGp~~~~~~------------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~ 283 (415)
T 3rsc_A 222 DRFVFVGPCFDDRR------------------FLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTL 283 (415)
T ss_dssp TTEEECCCCCCCCG------------------GGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEEC
T ss_pred CceEEeCCCCCCcc------------------cCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEEe
Confidence 56899999875322 122355445578999999999987777888999999999898999887
Q ss_pred ccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHHH
Q 012587 304 RPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRF 383 (460)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~ 383 (460)
+.+. ....+. ..++|+.+.+|+|+.++|+++++ +|||||.||++||+++|+|+|++|...||..||++
T Consensus 284 g~~~-----~~~~l~-----~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~ 351 (415)
T 3rsc_A 284 GGQV-----DPAALG-----DLPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARR 351 (415)
T ss_dssp TTTS-----CGGGGC-----CCCTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCCSGGGHHHHHH
T ss_pred CCCC-----ChHHhc-----CCCCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCCcchHHHHHHH
Confidence 5321 000111 14679999999999999999998 99999999999999999999999999999999999
Q ss_pred HHhhhceeeeec-CCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Q 012587 384 VGEVWKLGLDIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDI 450 (460)
Q Consensus 384 ~~e~~G~g~~~~-~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l 450 (460)
++ +.|+|+.+. ++++.+.|.++|.++|+| ++++++++++++.+.+ .+....+ .+.++.+
T Consensus 352 l~-~~g~g~~~~~~~~~~~~l~~~i~~ll~~--~~~~~~~~~~~~~~~~----~~~~~~~-~~~i~~~ 411 (415)
T 3rsc_A 352 VD-QLGLGAVLPGEKADGDTLLAAVGAVAAD--PALLARVEAMRGHVRR----AGGAARA-ADAVEAY 411 (415)
T ss_dssp HH-HHTCEEECCGGGCCHHHHHHHHHHHHTC--HHHHHHHHHHHHHHHH----SCHHHHH-HHHHHHH
T ss_pred HH-HcCCEEEcccCCCCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHh----cCHHHHH-HHHHHHH
Confidence 95 789999997 678999999999999999 9999999999999887 3443444 4444443
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-41 Score=333.51 Aligned_cols=369 Identities=14% Similarity=0.115 Sum_probs=245.2
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCC---CCC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHP---RTP 83 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 83 (460)
|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+... +++|..++........ ...
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~~------------g~~~~~l~~~~~~~~~~~~~~~ 68 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEV------------GVPMVPVGRAVRAGAREPGELP 68 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHHT------------TCCEEECSSCSSGGGSCTTCCC
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc------------CCceeecCCCHHHHhccccCCH
Confidence 6999999999999999999999999999999999997765555433 3777777643221100 001
Q ss_pred CChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcchH---HHHHHHhCCceEEEecchhHHHHHHhhc-cccccCC
Q 012587 84 DKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSRA---IDAAREVGVSIIYFRTISACAFWSFHCI-PDIIDAG 159 (460)
Q Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~~~---~~~A~~lgiP~v~~~~~~~~~~~~~~~~-~~~~~~~ 159 (460)
......+..........+.+++ .+||+||+|..+..+ ..+|+.+|||++.+..++........+. +......
T Consensus 69 ~~~~~~~~~~~~~~~~~l~~~~----~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~~~~~~~~~~~~~ 144 (404)
T 3h4t_A 69 PGAAEVVTEVVAEWFDKVPAAI----EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQAERDMYNQG 144 (404)
T ss_dssp TTCGGGHHHHHHHHHHHHHHHH----TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHh----cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCChhHHHHHHHHHHH
Confidence 1111222222221222222222 379999998665533 7899999999999888765311100000 0000000
Q ss_pred C-CCC----CCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCCCceeEeCcccc
Q 012587 160 E-LPI----KGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPNIYSIGPLNA 234 (460)
Q Consensus 160 ~-~p~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~~~~~~vG~~~~ 234 (460)
. ... ..+..-..++ .... .... ...+..+.+..+.+.+. ++ ..++++++|++..
T Consensus 145 ~~~~~~~~~~~~~~~lgl~------~~~~-~~~~--------~~~~~~l~~~~~~l~p~-----~~-~~~~~~~~G~~~~ 203 (404)
T 3h4t_A 145 ADRLFGDAVNSHRASIGLP------PVEH-LYDY--------GYTDQPWLAADPVLSPL-----RP-TDLGTVQTGAWIL 203 (404)
T ss_dssp HHHHHHHHHHHHHHHTTCC------CCCC-HHHH--------HHCSSCEECSCTTTSCC-----CT-TCCSCCBCCCCCC
T ss_pred HHHHhHHHHHHHHHHcCCC------CCcc-hhhc--------cccCCeEEeeCcceeCC-----CC-CCCCeEEeCcccc
Confidence 0 000 0000000000 0000 0000 01122344555555543 22 4467889998765
Q ss_pred ccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCC
Q 012587 235 HLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGE 314 (460)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~ 314 (460)
.... ..++++.+|++. ++++|||++||+.. ..+.+..+++++++.+.++||+.+.....
T Consensus 204 ~~~~-------------~~~~~l~~~l~~--~~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~~g~~~~~----- 262 (404)
T 3h4t_A 204 PDQR-------------PLSAELEGFLRA--GSPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLSSGWAGLG----- 262 (404)
T ss_dssp CCCC-------------CCCHHHHHHHHT--SSCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEECTTTTCC-----
T ss_pred CCCC-------------CCCHHHHHHHhc--CCCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEEeCCcccc-----
Confidence 4322 235568889874 67899999999986 66788889999999999999988643111
Q ss_pred CCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeee
Q 012587 315 NQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDI 394 (460)
Q Consensus 315 ~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~ 394 (460)
... .++|+.+.+|+||.++|+++++ +|||||.||++||+++|||+|++|...||+.||+++ ++.|+|..+
T Consensus 263 --~~~-----~~~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~-~~~G~g~~l 332 (404)
T 3h4t_A 263 --RID-----EGDDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRV-ADLGVGVAH 332 (404)
T ss_dssp --CSS-----CCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH-HHHTSEEEC
T ss_pred --ccc-----CCCCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHH-HHCCCEecc
Confidence 111 3579999999999999999997 999999999999999999999999999999999999 589999999
Q ss_pred c-CCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHh
Q 012587 395 K-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKM 452 (460)
Q Consensus 395 ~-~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~ 452 (460)
. .+++.+.|.++|+++|+ ++|+++++++++.+++ .....+.+.++.+..
T Consensus 333 ~~~~~~~~~l~~ai~~ll~---~~~~~~~~~~~~~~~~------~~~~~~~~~i~~~~~ 382 (404)
T 3h4t_A 333 DGPTPTVESLSAALATALT---PGIRARAAAVAGTIRT------DGTTVAAKLLLEAIS 382 (404)
T ss_dssp SSSSCCHHHHHHHHHHHTS---HHHHHHHHHHHTTCCC------CHHHHHHHHHHHHHH
T ss_pred CcCCCCHHHHHHHHHHHhC---HHHHHHHHHHHHHHhh------hHHHHHHHHHHHHHh
Confidence 8 67899999999999997 7899999998887653 224455556665544
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-40 Score=323.30 Aligned_cols=373 Identities=17% Similarity=0.153 Sum_probs=254.7
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCC---
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHP--- 80 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 80 (460)
|.|+||+|++.++.||++|+++|+++|+++||+|+|++++.+.+.+... ++.+..++..++....
T Consensus 2 m~M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~------------G~~~~~~~~~~~~~~~~~~ 69 (402)
T 3ia7_A 2 MRQRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAA------------GAEVVLYKSEFDTFHVPEV 69 (402)
T ss_dssp CCCCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHT------------TCEEEECCCGGGTSSSSSS
T ss_pred CCCCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHHc------------CCEEEeccccccccccccc
Confidence 4578999999999999999999999999999999999997766666543 3777777643322110
Q ss_pred CCCCChHHHHHH-HHh---hCcHHHHHHHHcCCCCccEEEEc-CCcchHHHHHHHhCCceEEEecchhHHHHHHhhcccc
Q 012587 81 RTPDKFPELVDS-LNC---ATPPLLKEMVSDSKSPVNCIITD-GYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDI 155 (460)
Q Consensus 81 ~~~~~~~~~~~~-~~~---~~~~~l~~~~~~~~~~pD~vv~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~ 155 (460)
....+....+.. +.. .....+.++++++ +||+||+| ....++..+|+.+|||+|.+.+........ ...+..
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~-~~~~~~ 146 (402)
T 3ia7_A 70 VKQEDAETQLHLVYVRENVAILRAAEEALGDN--PPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHY-SLFKEL 146 (402)
T ss_dssp SCCTTHHHHHHHHHHHHHHHHHHHHHHHHTTC--CCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTB-CHHHHH
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCccc-cccccc
Confidence 112223322222 222 2334556666665 99999999 777789999999999999987543211000 000000
Q ss_pred cc--CCCCCCCCCccCCCCCCcccCCCCCChHHHHHHHHh----------hhhcC-CCEEEEcChhhhchhHHHHHhhcC
Q 012587 156 ID--AGELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARET----------RLSAH-ADGLILNTFEDLEGPILSQIRNHS 222 (460)
Q Consensus 156 ~~--~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~-~~~~l~~~~~~le~p~~~~~~~~~ 222 (460)
.+ ....| .. .......+.+.. ..... .+..+....++++++ ....
T Consensus 147 ~~~~~~~~~-----------~~------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~ 204 (402)
T 3ia7_A 147 WKSNGQRHP-----------AD------VEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPF-----AETF 204 (402)
T ss_dssp HHHHTCCCG-----------GG------SHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTT-----GGGC
T ss_pred cccccccCh-----------hh------HHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCc-----cccC
Confidence 00 00000 00 000000111000 00011 255566665666554 3312
Q ss_pred CCceeEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEE
Q 012587 223 CPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWV 302 (460)
Q Consensus 223 ~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~ 302 (460)
..++.++||+...... ..+|+...+++++|||++||......+.+..++++++..+.++++.
T Consensus 205 ~~~~~~vGp~~~~~~~------------------~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (402)
T 3ia7_A 205 DERFAFVGPTLTGRDG------------------QPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMA 266 (402)
T ss_dssp CTTEEECCCCCCC----------------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEE
T ss_pred CCCeEEeCCCCCCccc------------------CCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEE
Confidence 3679999988643221 1235544557899999999998777788999999999988888888
Q ss_pred EccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceecccc-cccchhhH
Q 012587 303 IRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPS-FADQQINS 381 (460)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~-~~DQ~~na 381 (460)
++.+. ..+.+ +..++|+.+.+|+|+.++|+++++ +|||||.||++||+++|+|+|++|. ..||..||
T Consensus 267 ~g~~~---------~~~~~-~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a 334 (402)
T 3ia7_A 267 IGGFL---------DPAVL-GPLPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSA 334 (402)
T ss_dssp CCTTS---------CGGGG-CSCCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHH
T ss_pred eCCcC---------Chhhh-CCCCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHH
Confidence 75321 01111 114679999999999999999998 9999999999999999999999999 99999999
Q ss_pred HHHHhhhceeeeec-CCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHH
Q 012587 382 RFVGEVWKLGLDIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIK 451 (460)
Q Consensus 382 ~~~~e~~G~g~~~~-~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~ 451 (460)
+++. +.|+|..+. ++++++.|.+++.++|+| ++++++++++++.+.+ .+..... .+.++++.
T Consensus 335 ~~~~-~~g~g~~~~~~~~~~~~l~~~~~~ll~~--~~~~~~~~~~~~~~~~----~~~~~~~-~~~i~~~~ 397 (402)
T 3ia7_A 335 ERVI-ELGLGSVLRPDQLEPASIREAVERLAAD--SAVRERVRRMQRDILS----SGGPARA-ADEVEAYL 397 (402)
T ss_dssp HHHH-HTTSEEECCGGGCSHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHT----SCHHHHH-HHHHHHHH
T ss_pred HHHH-HcCCEEEccCCCCCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHhh----CChHHHH-HHHHHHHH
Confidence 9995 789999997 678999999999999999 9999999999999876 3443444 44455443
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-40 Score=328.15 Aligned_cols=371 Identities=12% Similarity=0.127 Sum_probs=237.8
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCC-CC---
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPR-DH--- 79 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--- 79 (460)
++||||+|++.|+.||++|+++||++|+++||+|+|++++.+.+.+.+. ++.|..++...+. +.
T Consensus 18 ~~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~~------------G~~~~~i~~~~~~~~~~~~ 85 (441)
T 2yjn_A 18 GSHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITAA------------GLTAVPVGTDVDLVDFMTH 85 (441)
T ss_dssp -CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHTT------------TCCEEECSCCCCHHHHHHH
T ss_pred CCccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHhC------------CCceeecCCccchHHHhhh
Confidence 5689999999999999999999999999999999999997765444332 4778877754210 00
Q ss_pred -----------CCC----CC--ChH---HHHHHHH---hh------CcHHHHHHHHcCCCCccEEEEcCCcchHHHHHHH
Q 012587 80 -----------PRT----PD--KFP---ELVDSLN---CA------TPPLLKEMVSDSKSPVNCIITDGYMSRAIDAARE 130 (460)
Q Consensus 80 -----------~~~----~~--~~~---~~~~~~~---~~------~~~~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~ 130 (460)
... .. .+. .....+. .. ....+.++++++ +||+||+|..+.++..+|+.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~pDlVv~d~~~~~~~~aA~~ 163 (441)
T 2yjn_A 86 AGHDIIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRKW--RPDLVIWEPLTFAAPIAAAV 163 (441)
T ss_dssp TTHHHHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHHH--CCSEEEECTTCTHHHHHHHH
T ss_pred hhcccccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHhc--CCCEEEecCcchhHHHHHHH
Confidence 000 10 111 1111121 10 223344455555 99999999987889999999
Q ss_pred hCCceEEEecchhHHHHHHhhccccccCCCCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhc---------CCCE
Q 012587 131 VGVSIIYFRTISACAFWSFHCIPDIIDAGELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSA---------HADG 201 (460)
Q Consensus 131 lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~ 201 (460)
+|||+|.+...+.........+... ....+.. .......+.+.+...... ..+.
T Consensus 164 lgiP~v~~~~~~~~~~~~~~~~~~~--~~~~~~~---------------~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~ 226 (441)
T 2yjn_A 164 TGTPHARLLWGPDITTRARQNFLGL--LPDQPEE---------------HREDPLAEWLTWTLEKYGGPAFDEEVVVGQW 226 (441)
T ss_dssp HTCCEEEECSSCCHHHHHHHHHHHH--GGGSCTT---------------TCCCHHHHHHHHHHHHTTCCCCCGGGTSCSS
T ss_pred cCCCEEEEecCCCcchhhhhhhhhh--ccccccc---------------cccchHHHHHHHHHHHcCCCCCCccccCCCe
Confidence 9999999865543221111000000 0000000 001112222222111110 1223
Q ss_pred EEEcChhhhchhHHHHHhhcCCCceeEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccC-
Q 012587 202 LILNTFEDLEGPILSQIRNHSCPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVM- 280 (460)
Q Consensus 202 ~l~~~~~~le~p~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~- 280 (460)
.+....+.++++ . .++. ..+++.... .+.++.+|++..+++++|||++||....
T Consensus 227 ~l~~~~~~~~~~-----~--~~~~-~~~~~~~~~-----------------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~ 281 (441)
T 2yjn_A 227 TIDPAPAAIRLD-----T--GLKT-VGMRYVDYN-----------------GPSVVPEWLHDEPERRRVCLTLGISSREN 281 (441)
T ss_dssp EEECSCGGGSCC-----C--CCCE-EECCCCCCC-----------------SSCCCCGGGSSCCSSCEEEEEC-------
T ss_pred EEEecCccccCC-----C--CCCC-CceeeeCCC-----------------CCcccchHhhcCCCCCEEEEECCCCcccc
Confidence 444443333321 1 1111 112221110 1123557887556789999999998753
Q ss_pred --CHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHH
Q 012587 281 --SRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNST 358 (460)
Q Consensus 281 --~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~ 358 (460)
..+.+..++++++..++++||+.++... ..+.. .++|+.+.+|+||.++|+++++ ||||||.||+
T Consensus 282 ~~~~~~~~~~~~al~~~~~~~v~~~g~~~~------~~l~~-----~~~~v~~~~~~~~~~ll~~ad~--~V~~~G~~t~ 348 (441)
T 2yjn_A 282 SIGQVSIEELLGAVGDVDAEIIATFDAQQL------EGVAN-----IPDNVRTVGFVPMHALLPTCAA--TVHHGGPGSW 348 (441)
T ss_dssp ---CCSTTTTHHHHHTSSSEEEECCCTTTT------SSCSS-----CCSSEEECCSCCHHHHGGGCSE--EEECCCHHHH
T ss_pred cChHHHHHHHHHHHHcCCCEEEEEECCcch------hhhcc-----CCCCEEEecCCCHHHHHhhCCE--EEECCCHHHH
Confidence 2345677889999889999998753211 11211 4579999999999999999997 9999999999
Q ss_pred HHHHHhCCceecccccccchhhHHHHHhhhceeeeec-CCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCC
Q 012587 359 LESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGG 437 (460)
Q Consensus 359 ~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~-~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g 437 (460)
+||+++|||+|++|...||..||++++ +.|+|+.+. ++++.+.|.++|.++|+| ++++++++++++.+... .
T Consensus 349 ~Ea~~~G~P~i~~p~~~dQ~~na~~l~-~~g~g~~~~~~~~~~~~l~~~i~~ll~~--~~~~~~~~~~~~~~~~~----~ 421 (441)
T 2yjn_A 349 HTAAIHGVPQVILPDGWDTGVRAQRTQ-EFGAGIALPVPELTPDQLRESVKRVLDD--PAHRAGAARMRDDMLAE----P 421 (441)
T ss_dssp HHHHHTTCCEEECCCSHHHHHHHHHHH-HHTSEEECCTTTCCHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHTS----C
T ss_pred HHHHHhCCCEEEeCCcccHHHHHHHHH-HcCCEEEcccccCCHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHcC----C
Confidence 999999999999999999999999994 789999997 678999999999999999 99999999999998873 3
Q ss_pred ChHHHHHHHHHHHH
Q 012587 438 SSYCNLDRLVNDIK 451 (460)
Q Consensus 438 ~~~~~~~~~~~~l~ 451 (460)
. ...+.+.++++.
T Consensus 422 ~-~~~~~~~i~~~~ 434 (441)
T 2yjn_A 422 S-PAEVVGICEELA 434 (441)
T ss_dssp C-HHHHHHHHHHHH
T ss_pred C-HHHHHHHHHHHH
Confidence 3 344455555544
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-38 Score=312.80 Aligned_cols=364 Identities=17% Similarity=0.189 Sum_probs=244.5
Q ss_pred CCC-CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCC
Q 012587 1 MEK-QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDH 79 (460)
Q Consensus 1 ~~~-~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (460)
|+. |.||||+|++.++.||++|+++|+++|+++||+|++++++.+.+.+.+. ++++..++..++...
T Consensus 1 M~~~m~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~~------------g~~~~~~~~~~~~~~ 68 (430)
T 2iyf_A 1 MTTQTTPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAAT------------GPRPVLYHSTLPGPD 68 (430)
T ss_dssp -------CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHTT------------SCEEEECCCCSCCTT
T ss_pred CCCccccceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHhC------------CCEEEEcCCcCcccc
Confidence 444 5678999999999999999999999999999999999987765554332 477888775433221
Q ss_pred CC---CCCChHHHHHHHH---hhCcHHHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEEEecchhHHHHHHhhcc
Q 012587 80 PR---TPDKFPELVDSLN---CATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIP 153 (460)
Q Consensus 80 ~~---~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~ 153 (460)
.. ...++...+..+. ......+.+++++. +||+||+|.+..++..+|+.+|||+|.+.+.+.........+.
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~ 146 (430)
T 2iyf_A 69 ADPEAWGSTLLDNVEPFLNDAIQALPQLADAYADD--IPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVA 146 (430)
T ss_dssp SCGGGGCSSHHHHHHHHHHHHHHHHHHHHHHHTTS--CCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTH
T ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcc--CCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccccc
Confidence 10 0123322222221 12345556666665 9999999987778999999999999998865431000000000
Q ss_pred ccccCCCCCCCCCccCCCCCCcccCCCCCChHHHHHHHHh----------hhhcCCCEEEEcChhhhchhHHHHHhhcCC
Q 012587 154 DIIDAGELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARET----------RLSAHADGLILNTFEDLEGPILSQIRNHSC 223 (460)
Q Consensus 154 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~~~~le~p~~~~~~~~~~ 223 (460)
.... .+..+.+. .......+.+.. ......+.+++++.+.++++. +. ..
T Consensus 147 ~~~~---------~~~~~~~~-------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~----~~-~~ 205 (430)
T 2iyf_A 147 EPMW---------REPRQTER-------GRAYYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPHA----DR-VD 205 (430)
T ss_dssp HHHH---------HHHHHSHH-------HHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTTG----GG-SC
T ss_pred cchh---------hhhccchH-------HHHHHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCCc----cc-CC
Confidence 0000 00000000 000000011100 011245678889888877651 22 34
Q ss_pred Cc-eeEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhC-CCcEEE
Q 012587 224 PN-IYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHS-KKSFLW 301 (460)
Q Consensus 224 ~~-~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~ 301 (460)
++ ++++||....... ..+|.+..+++++||+++||......+.+..++++++.. +.+++|
T Consensus 206 ~~~v~~vG~~~~~~~~------------------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~ 267 (430)
T 2iyf_A 206 EDVYTFVGACQGDRAE------------------EGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVL 267 (430)
T ss_dssp TTTEEECCCCC-----------------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEE
T ss_pred CccEEEeCCcCCCCCC------------------CCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEE
Confidence 57 9999986532110 113554345678999999999855667888899999886 778888
Q ss_pred EEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhH
Q 012587 302 VIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINS 381 (460)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na 381 (460)
.++.+. ..+.+ +..++|+.+.+|+||.++|+++++ ||||||+||++||+++|+|+|++|...||..|+
T Consensus 268 ~~G~~~---------~~~~l-~~~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a 335 (430)
T 2iyf_A 268 QIGRKV---------TPAEL-GELPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQFGNA 335 (430)
T ss_dssp ECC------------CGGGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHH
T ss_pred EeCCCC---------ChHHh-ccCCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCccchHHHH
Confidence 875321 01111 114579999999999999999997 999999999999999999999999999999999
Q ss_pred HHHHhhhceeeeec-CCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHH
Q 012587 382 RFVGEVWKLGLDIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKS 432 (460)
Q Consensus 382 ~~~~e~~G~g~~~~-~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~ 432 (460)
+++. +.|+|+.+. ++++.+.|.++|.++|+| +++++++.++++++.+.
T Consensus 336 ~~~~-~~g~g~~~~~~~~~~~~l~~~i~~ll~~--~~~~~~~~~~~~~~~~~ 384 (430)
T 2iyf_A 336 DMLQ-GLGVARKLATEEATADLLRETALALVDD--PEVARRLRRIQAEMAQE 384 (430)
T ss_dssp HHHH-HTTSEEECCCC-CCHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHH
T ss_pred HHHH-HcCCEEEcCCCCCCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHhc
Confidence 9995 789999997 678999999999999998 89999999999988874
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-38 Score=308.77 Aligned_cols=352 Identities=15% Similarity=0.135 Sum_probs=244.0
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCC--------
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRD-------- 78 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 78 (460)
|||++++.++.||++|+++|+++|+++||+|+|++++...+.+... ++.+..++.....+
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~------------g~~~~~~~~~~~~~~~~~~~~~ 68 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTGV------------GLPAVATTDLPIRHFITTDREG 68 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT------------TCCEEESCSSCHHHHHHBCTTS
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHhC------------CCEEEEeCCcchHHHHhhhccc
Confidence 6999999999999999999999999999999999987654444332 36666665432000
Q ss_pred CCCCC-C--ChHHHH-HH----HHhhCcHHHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEEEecchhHHHHHHh
Q 012587 79 HPRTP-D--KFPELV-DS----LNCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFH 150 (460)
Q Consensus 79 ~~~~~-~--~~~~~~-~~----~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~ 150 (460)
..... . .....+ .. ........+.+++++. +||+||+|.+..++..+|+.+|||+|.+...+...
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~~----- 141 (384)
T 2p6p_A 69 RPEAIPSDPVAQARFTGRWFARMAASSLPRMLDFSRAW--RPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVDA----- 141 (384)
T ss_dssp CBCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCC-----
T ss_pred CccccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHhcc--CCcEEEECcchhhHHHHHHhcCCCEEEeccCCccc-----
Confidence 00000 1 111111 11 1112234555666665 99999999887788999999999999876432110
Q ss_pred hccccccCCCCCCCCCccCCCCCCcccCCCCCChHHH---HHHHHhhhh--cCCCEEEEcChhhhchhHHHHHhhcCC-C
Q 012587 151 CIPDIIDAGELPIKGFLRCRDLPSFCRVNDPMDPHLL---LFARETRLS--AHADGLILNTFEDLEGPILSQIRNHSC-P 224 (460)
Q Consensus 151 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--~~~~~~l~~~~~~le~p~~~~~~~~~~-~ 224 (460)
.. . ...... ......... ..++.+++++.+.++++ ++ .. .
T Consensus 142 -------~~---------------~------~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~-----~~-~~~~ 187 (384)
T 2p6p_A 142 -------DG---------------I------HPGADAELRPELSELGLERLPAPDLFIDICPPSLRPA-----NA-APAR 187 (384)
T ss_dssp -------TT---------------T------HHHHHHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCT-----TS-CCCE
T ss_pred -------ch---------------h------hHHHHHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCC-----CC-CCCC
Confidence 00 0 000011 111111110 11567888888777654 11 11 1
Q ss_pred ceeEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccC-----CHHHHHHHHHHHhhCCCcE
Q 012587 225 NIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVM-----SRDQLIEFYYGLVHSKKSF 299 (460)
Q Consensus 225 ~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~-----~~~~~~~~~~al~~~~~~~ 299 (460)
++.+++. . . +.++.+|++..+++++|||++||.... +.+.+..+++++++.+.++
T Consensus 188 ~~~~~~~---~-~----------------~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~ 247 (384)
T 2p6p_A 188 MMRHVAT---S-R----------------QCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVEL 247 (384)
T ss_dssp ECCCCCC---C-C----------------CCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEE
T ss_pred ceEecCC---C-C----------------CCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEE
Confidence 2333321 0 0 112456887556779999999999864 4467888999999889999
Q ss_pred EEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceecccccccchh
Q 012587 300 LWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQI 379 (460)
Q Consensus 300 i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~ 379 (460)
+|+.++. ..+.+ +..++|+.+ +|+||.++|+++++ ||||||+||++||+++|+|+|++|...||..
T Consensus 248 ~~~~g~~----------~~~~l-~~~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~ 313 (384)
T 2p6p_A 248 IVAAPDT----------VAEAL-RAEVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLLIPKGSVLEA 313 (384)
T ss_dssp EEECCHH----------HHHHH-HHHCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEECCCSHHHHH
T ss_pred EEEeCCC----------CHHhh-CCCCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEEccCcccchH
Confidence 9987421 11111 235789999 99999999999987 9999999999999999999999999999999
Q ss_pred hHHHHHhhhceeeeec-CCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHhh
Q 012587 380 NSRFVGEVWKLGLDIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKMM 453 (460)
Q Consensus 380 na~~~~e~~G~g~~~~-~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~~ 453 (460)
||+++ ++.|+|+.+. ++.+.+.|.++|+++|+| +++++++++++++++.. ....++ .+.++.|-.+
T Consensus 314 ~a~~~-~~~g~g~~~~~~~~~~~~l~~~i~~ll~~--~~~~~~~~~~~~~~~~~----~~~~~~-~~~i~~~~~~ 380 (384)
T 2p6p_A 314 PARRV-ADYGAAIALLPGEDSTEAIADSCQELQAK--DTYARRAQDLSREISGM----PLPATV-VTALEQLAHH 380 (384)
T ss_dssp HHHHH-HHHTSEEECCTTCCCHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHTS----CCHHHH-HHHHHHHHHH
T ss_pred HHHHH-HHCCCeEecCcCCCCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHhC----CCHHHH-HHHHHHHhhh
Confidence 99999 4789999997 578999999999999999 99999999999999874 443444 4555555444
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-37 Score=304.59 Aligned_cols=344 Identities=15% Similarity=0.146 Sum_probs=219.3
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCC-------
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLP------- 76 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 76 (460)
..+|||+|++.++.||++|+++|+++|+++||+|++++++.+.+.+... ++.+..++....
T Consensus 13 ~~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~------------G~~~~~~~~~~~~~~~~~~ 80 (398)
T 4fzr_A 13 GSHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTGA------------GLPFAPTCPSLDMPEVLSW 80 (398)
T ss_dssp --CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHHT------------TCCEEEEESSCCHHHHHSB
T ss_pred CCceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHhC------------CCeeEecCCccchHhhhhh
Confidence 5678999999999999999999999999999999999986665555443 355555542110
Q ss_pred --CCC-CCCCCChH-------HHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEEEecchhHHH
Q 012587 77 --RDH-PRTPDKFP-------ELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAF 146 (460)
Q Consensus 77 --~~~-~~~~~~~~-------~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~ 146 (460)
... ........ ..+..........+.++++++ +||+|++|...+++..+|+.+|||+|.+........
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~ 158 (398)
T 4fzr_A 81 DREGNRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAERW--KPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPE 158 (398)
T ss_dssp CTTSCBCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCH
T ss_pred hccCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCCEEEECccccHHHHHHHhhCCCEEEeccCCCCch
Confidence 000 00011111 112222222344567777776 999999998778899999999999998776532111
Q ss_pred HHHhhccccccCCCCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhh--hhcCCCEEEEcChhhhchhHHHHHhhcCCC
Q 012587 147 WSFHCIPDIIDAGELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETR--LSAHADGLILNTFEDLEGPILSQIRNHSCP 224 (460)
Q Consensus 147 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~le~p~~~~~~~~~~~ 224 (460)
........ .......... ........+....+.+..+ ......
T Consensus 159 ~~~~~~~~------------------------------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 203 (398)
T 4fzr_A 159 LIKSAGVG------------------------------ELAPELAELGLTDFPDPLLSIDVCPPSMEAQ-----PKPGTT 203 (398)
T ss_dssp HHHHHHHH------------------------------HTHHHHHTTTCSSCCCCSEEEECSCGGGC---------CCCE
T ss_pred hhhHHHHH------------------------------HHHHHHHHcCCCCCCCCCeEEEeCChhhCCC-----CCCCCC
Confidence 00000000 0000000000 0011233444443333322 100000
Q ss_pred ceeEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCC--------HHHHHHHHHHHhhCC
Q 012587 225 NIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMS--------RDQLIEFYYGLVHSK 296 (460)
Q Consensus 225 ~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~--------~~~~~~~~~al~~~~ 296 (460)
++.++++.. ...++.+|+...+++++|||++||..... ...+..+++++++.+
T Consensus 204 ~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~~ 264 (398)
T 4fzr_A 204 KMRYVPYNG-------------------RNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKLG 264 (398)
T ss_dssp ECCCCCCCC-------------------SSCCCCHHHHSCCSSCEEECC----------------CCSHHHHHHHGGGGT
T ss_pred CeeeeCCCC-------------------CCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhCC
Confidence 111221100 11224567765567899999999997432 345788899999899
Q ss_pred CcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceeccccccc
Q 012587 297 KSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFAD 376 (460)
Q Consensus 297 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~D 376 (460)
.+++|+.++.. .+.+ +..++|+.+.+|+|+.++|+++++ ||||||.||++||+++|+|+|++|...|
T Consensus 265 ~~~v~~~~~~~----------~~~l-~~~~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v~~p~~~~ 331 (398)
T 4fzr_A 265 FEVVVAVSDKL----------AQTL-QPLPEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQVSVPVIAE 331 (398)
T ss_dssp CEEEECCCC-------------------CCTTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSGG
T ss_pred CEEEEEeCCcc----------hhhh-ccCCCcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEEecCCchh
Confidence 99988875321 1111 125789999999999999999998 9999999999999999999999999999
Q ss_pred chhhHHHHHhhhceeeeec-CCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHH
Q 012587 377 QQINSRFVGEVWKLGLDIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKK 431 (460)
Q Consensus 377 Q~~na~~~~e~~G~g~~~~-~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~ 431 (460)
|..|+.++ ++.|+|+.+. ++++++.|.++|.++|+| +++++++++.++.+.+
T Consensus 332 q~~~a~~~-~~~g~g~~~~~~~~~~~~l~~ai~~ll~~--~~~~~~~~~~~~~~~~ 384 (398)
T 4fzr_A 332 VWDSARLL-HAAGAGVEVPWEQAGVESVLAACARIRDD--SSYVGNARRLAAEMAT 384 (398)
T ss_dssp GHHHHHHH-HHTTSEEECC-------CHHHHHHHHHHC--THHHHHHHHHHHHHTT
T ss_pred HHHHHHHH-HHcCCEEecCcccCCHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHc
Confidence 99999999 5789999997 678999999999999999 9999999999999876
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-37 Score=299.90 Aligned_cols=352 Identities=14% Similarity=0.129 Sum_probs=238.5
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCC------
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPR------ 77 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 77 (460)
..+|||+|++.++.||++|+++|+++|.++||+|+++++ .+.+.+... ++.+..++.....
T Consensus 18 ~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~~------------G~~~~~~~~~~~~~~~~~~ 84 (398)
T 3oti_A 18 GRHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAAA------------GLEVVDVAPDYSAVKVFEQ 84 (398)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHTT------------TCEEEESSTTCCHHHHHHH
T ss_pred hhcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHhC------------CCeeEecCCccCHHHHhhh
Confidence 456899999999999999999999999999999999998 665555432 4778877643110
Q ss_pred --------------CCCCCCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEEEecchh
Q 012587 78 --------------DHPRTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISA 143 (460)
Q Consensus 78 --------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~ 143 (460)
............+..........+.++++++ +||+||+|...+++..+|+.+|||+|.+.....
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~ 162 (398)
T 3oti_A 85 VAKDNPRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDY--RPDLVVYEQGATVGLLAADRAGVPAVQRNQSAW 162 (398)
T ss_dssp HHHHCHHHHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHHTCCEEEECCTTC
T ss_pred cccCCccccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHc--CCCEEEECchhhHHHHHHHHcCCCEEEEeccCC
Confidence 0011122233444445555667788888887 999999998888899999999999998764421
Q ss_pred HHHHHHhhccccccCCCCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhh-hcCCCEEEEcChhhhchhHHHHHhhcC
Q 012587 144 CAFWSFHCIPDIIDAGELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRL-SAHADGLILNTFEDLEGPILSQIRNHS 222 (460)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~le~p~~~~~~~~~ 222 (460)
..... .... ...+.. ....... .......+....+.+..+ ....
T Consensus 163 ~~~~~----~~~~-------------------------~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 207 (398)
T 3oti_A 163 RTRGM----HRSI-------------------------ASFLTD-LMDKHQVSLPEPVATIESFPPSLLLE-----AEPE 207 (398)
T ss_dssp CCTTH----HHHH-------------------------HTTCHH-HHHHTTCCCCCCSEEECSSCGGGGTT-----SCCC
T ss_pred Cccch----hhHH-------------------------HHHHHH-HHHHcCCCCCCCCeEEEeCCHHHCCC-----CCCC
Confidence 10000 0000 000000 1111110 112233343333333322 0000
Q ss_pred CCceeEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccC--CHHHHHHHHHHHhhCCCcEE
Q 012587 223 CPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVM--SRDQLIEFYYGLVHSKKSFL 300 (460)
Q Consensus 223 ~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~--~~~~~~~~~~al~~~~~~~i 300 (460)
..++.++ |. . ....+.+|+...+++++|||++||.... ..+.+..+++++++.+.+++
T Consensus 208 ~~~~~~~-~~--~-----------------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v 267 (398)
T 3oti_A 208 GWFMRWV-PY--G-----------------GGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFV 267 (398)
T ss_dssp SBCCCCC-CC--C-----------------CCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEE
T ss_pred CCCcccc-CC--C-----------------CCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEE
Confidence 0011111 00 0 0112334665556789999999999653 45678889999998999999
Q ss_pred EEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceecccccccchhh
Q 012587 301 WVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQIN 380 (460)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~n 380 (460)
|+.++.. ...+. ..++|+.+.+|+|+.++|+++++ ||||||.||++||+++|+|+|++|...||..|
T Consensus 268 ~~~g~~~------~~~l~-----~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~~~ 334 (398)
T 3oti_A 268 LALGDLD------ISPLG-----TLPRNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQH 334 (398)
T ss_dssp EECTTSC------CGGGC-----SCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCCTTCCSSC
T ss_pred EEECCcC------hhhhc-----cCCCcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCCCchhHHH
Confidence 9875321 01111 14679999999999999999997 99999999999999999999999999999999
Q ss_pred H--HHHHhhhceeeeec-CCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Q 012587 381 S--RFVGEVWKLGLDIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDI 450 (460)
Q Consensus 381 a--~~~~e~~G~g~~~~-~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l 450 (460)
+ .++ ++.|+|+.++ ++.+++.|. ++|+| ++++++++++++++.+. .. ...+.+.++.+
T Consensus 335 a~~~~~-~~~g~g~~~~~~~~~~~~l~----~ll~~--~~~~~~~~~~~~~~~~~----~~-~~~~~~~l~~l 395 (398)
T 3oti_A 335 TAREAV-SRRGIGLVSTSDKVDADLLR----RLIGD--ESLRTAAREVREEMVAL----PT-PAETVRRIVER 395 (398)
T ss_dssp TTHHHH-HHHTSEEECCGGGCCHHHHH----HHHHC--HHHHHHHHHHHHHHHTS----CC-HHHHHHHHHHH
T ss_pred HHHHHH-HHCCCEEeeCCCCCCHHHHH----HHHcC--HHHHHHHHHHHHHHHhC----CC-HHHHHHHHHHH
Confidence 9 999 5889999997 567877776 88888 99999999999998873 33 44445555554
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-34 Score=281.97 Aligned_cols=350 Identities=13% Similarity=0.152 Sum_probs=233.0
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEec-CCCCC--CC----C
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTL-TDGLP--RD----H 79 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~----~ 79 (460)
|||+|++.++.||++|++.|+++|+++||+|++++++...+.+... ++.+..+ +.... .. .
T Consensus 2 MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~------------g~~~~~~~~~~~~~~~~~~~~~ 69 (391)
T 3tsa_A 2 MRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHGA------------GLTTAGIRGNDRTGDTGGTTQL 69 (391)
T ss_dssp CEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHHB------------TCEEEEC--------------C
T ss_pred cEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHhC------------CCceeeecCCccchhhhhhhcc
Confidence 7999999999999999999999999999999999986655555443 3566655 32110 00 0
Q ss_pred ------C--CCCCChHHHHHHHHhhC-------cHHHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEEEecchhH
Q 012587 80 ------P--RTPDKFPELVDSLNCAT-------PPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISAC 144 (460)
Q Consensus 80 ------~--~~~~~~~~~~~~~~~~~-------~~~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~ 144 (460)
. .........+......+ ...+.++++++ +||+|++|...+.+..+|+.+|||++.+......
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~ 147 (391)
T 3tsa_A 70 RFPNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAW--RPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDP 147 (391)
T ss_dssp CSCCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCC
T ss_pred cccccccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHhc--CCCEEEeCcchhHHHHHHHHhCCCEEEEecCCcc
Confidence 0 00011111222222223 45667777777 9999999987778899999999999997654321
Q ss_pred HHHHHhhccccccCCCCCCCCCccCCCCCCcccCCCCCChHHHHHHHH---hhh--hcCCCEEEEcChhhhchhHHHHHh
Q 012587 145 AFWSFHCIPDIIDAGELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARE---TRL--SAHADGLILNTFEDLEGPILSQIR 219 (460)
Q Consensus 145 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~l~~~~~~le~p~~~~~~ 219 (460)
..... .......+.+. ... ....+..+....++++.+ .
T Consensus 148 ~~~~~--------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 190 (391)
T 3tsa_A 148 TAGPF--------------------------------SDRAHELLDPVCRHHGLTGLPTPELILDPCPPSLQAS-----D 190 (391)
T ss_dssp TTTHH--------------------------------HHHHHHHHHHHHHHTTSSSSCCCSEEEECSCGGGSCT-----T
T ss_pred ccccc--------------------------------cchHHHHHHHHHHHcCCCCCCCCceEEEecChhhcCC-----C
Confidence 10000 00001111111 110 011244454444444332 1
Q ss_pred hcCC-CceeEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCccc--CC-HHHHHHHHHHHhhC
Q 012587 220 NHSC-PNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAV--MS-RDQLIEFYYGLVHS 295 (460)
Q Consensus 220 ~~~~-~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~--~~-~~~~~~~~~al~~~ 295 (460)
. .. .++.++ |.. ....+.+|+...+++++|++++||... .. ..++..++++ ++.
T Consensus 191 ~-~~~~~~~~~-p~~-------------------~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~ 248 (391)
T 3tsa_A 191 A-PQGAPVQYV-PYN-------------------GSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TEL 248 (391)
T ss_dssp S-CCCEECCCC-CCC-------------------CCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTS
T ss_pred C-CccCCeeee-cCC-------------------CCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccC
Confidence 1 00 112222 110 011233577655678999999999853 33 6778888888 877
Q ss_pred -CCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceeccccc
Q 012587 296 -KKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSF 374 (460)
Q Consensus 296 -~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~ 374 (460)
+.+++|..++.. ...+. ..++|+.+.+|+|+.++|++|++ ||||||.||++||+++|+|+|++|..
T Consensus 249 p~~~~v~~~~~~~------~~~l~-----~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~ 315 (391)
T 3tsa_A 249 PGVEAVIAVPPEH------RALLT-----DLPDNARIAESVPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQLVLPQY 315 (391)
T ss_dssp TTEEEEEECCGGG------GGGCT-----TCCTTEEECCSCCGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCS
T ss_pred CCeEEEEEECCcc------hhhcc-----cCCCCEEEeccCCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEEecCCc
Confidence 788888875321 01121 14679999999999999999997 99999999999999999999999999
Q ss_pred ccchhhHHHHHhhhceeeeecC---CcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Q 012587 375 ADQQINSRFVGEVWKLGLDIKD---LCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDI 450 (460)
Q Consensus 375 ~DQ~~na~~~~e~~G~g~~~~~---~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l 450 (460)
.||..|+.++ ++.|+|..+.. +.+.+.|.+++.++|+| ++++++++++++.+.+ .... ..+.+.++.+
T Consensus 316 ~~q~~~a~~~-~~~g~g~~~~~~~~~~~~~~l~~ai~~ll~~--~~~~~~~~~~~~~~~~----~~~~-~~~~~~i~~~ 386 (391)
T 3tsa_A 316 FDQFDYARNL-AAAGAGICLPDEQAQSDHEQFTDSIATVLGD--TGFAAAAIKLSDEITA----MPHP-AALVRTLENT 386 (391)
T ss_dssp TTHHHHHHHH-HHTTSEEECCSHHHHTCHHHHHHHHHHHHTC--THHHHHHHHHHHHHHT----SCCH-HHHHHHHHHC
T ss_pred ccHHHHHHHH-HHcCCEEecCcccccCCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHc----CCCH-HHHHHHHHHH
Confidence 9999999999 47899999953 37899999999999999 9999999999999876 3443 4444555544
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-32 Score=270.43 Aligned_cols=362 Identities=19% Similarity=0.214 Sum_probs=242.4
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCC---------
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDG--------- 74 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 74 (460)
..+|||+|++.++.||++|+++|+++|+++||+|++++++...+.+.+ . ++.+..++..
T Consensus 18 ~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~-~-----------g~~~~~~~~~~~~~~~~~~ 85 (412)
T 3otg_A 18 GRHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRK-L-----------GFEPVATGMPVFDGFLAAL 85 (412)
T ss_dssp CCSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH-T-----------TCEEEECCCCHHHHHHHHH
T ss_pred cceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHh-c-----------CCceeecCcccccchhhhh
Confidence 456899999999999999999999999999999999998765444433 2 3777777630
Q ss_pred ---CCCCC------CCCCCChHHHHHHH-HhhCcHHHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEEEecchhH
Q 012587 75 ---LPRDH------PRTPDKFPELVDSL-NCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISAC 144 (460)
Q Consensus 75 ---~~~~~------~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~ 144 (460)
..... ..........+... .......+.++++++ +||+|++|....++..+|+.+|||+|.+......
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~ 163 (412)
T 3otg_A 86 RIRFDTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERL--RPDLVVQEISNYGAGLAALKAGIPTICHGVGRDT 163 (412)
T ss_dssp HHHHSCSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCC
T ss_pred hhhhcccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhc--CCCEEEECchhhHHHHHHHHcCCCEEEecccccC
Confidence 00000 00011222222222 222335667777776 9999999977778889999999999987654321
Q ss_pred HHHHHhhccccccCCCCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhh-------hcCCCEEEEcChhhhchhHHHH
Q 012587 145 AFWSFHCIPDIIDAGELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRL-------SAHADGLILNTFEDLEGPILSQ 217 (460)
Q Consensus 145 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~l~~~~~~le~p~~~~ 217 (460)
.......+.. ........... ....+..+..+.+.++.+..
T Consensus 164 ~~~~~~~~~~------------------------------~~~~~~~~~g~~~~~~~~~~~~d~~i~~~~~~~~~~~~-- 211 (412)
T 3otg_A 164 PDDLTRSIEE------------------------------EVRGLAQRLGLDLPPGRIDGFGNPFIDIFPPSLQEPEF-- 211 (412)
T ss_dssp CSHHHHHHHH------------------------------HHHHHHHHTTCCCCSSCCGGGGCCEEECSCGGGSCHHH--
T ss_pred chhhhHHHHH------------------------------HHHHHHHHcCCCCCcccccCCCCeEEeeCCHHhcCCcc--
Confidence 0000000000 00000000000 12344455555555444311
Q ss_pred HhhcCCCceeEeCccccccccCCCccccCCCCccccchhhhhh-hhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCC
Q 012587 218 IRNHSCPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAW-LDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSK 296 (460)
Q Consensus 218 ~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~ 296 (460)
. .......+-+.... ......+| ....+++++|++++||........+..+++++++.+
T Consensus 212 --~-~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~l~~~~ 271 (412)
T 3otg_A 212 --R-ARPRRHELRPVPFA-----------------EQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDGLAGLD 271 (412)
T ss_dssp --H-TCTTEEECCCCCCC-----------------CCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHHHHHHHTSS
T ss_pred --c-CCCCcceeeccCCC-----------------CCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHHHHHHHcCC
Confidence 0 11111111111110 01123345 222457899999999997667788899999999889
Q ss_pred CcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceeccccccc
Q 012587 297 KSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFAD 376 (460)
Q Consensus 297 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~D 376 (460)
.+++|..++... ...+.. .++|+.+.+|+|+.++|+++++ ||+|||.+|++||+++|+|+|++|...|
T Consensus 272 ~~~~~~~g~~~~-----~~~l~~-----~~~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G~P~v~~p~~~~ 339 (412)
T 3otg_A 272 ADVLVASGPSLD-----VSGLGE-----VPANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQLSFPWAGD 339 (412)
T ss_dssp SEEEEECCSSCC-----CTTCCC-----CCTTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHHHHTCCEEECCCSTT
T ss_pred CEEEEEECCCCC-----hhhhcc-----CCCcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHHHhCCCEEecCCchh
Confidence 999988864310 112222 4579999999999999999998 9999999999999999999999999999
Q ss_pred chhhHHHHHhhhceeeeec-CCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHH
Q 012587 377 QQINSRFVGEVWKLGLDIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIK 451 (460)
Q Consensus 377 Q~~na~~~~e~~G~g~~~~-~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~ 451 (460)
|..|+.++. +.|+|..+. ++++++.|.+++.++|+| +++++++.+.++++.+. .+ ...+.+.++++.
T Consensus 340 q~~~~~~v~-~~g~g~~~~~~~~~~~~l~~ai~~ll~~--~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~l~ 407 (412)
T 3otg_A 340 SFANAQAVA-QAGAGDHLLPDNISPDSVSGAAKRLLAE--ESYRAGARAVAAEIAAM----PG-PDEVVRLLPGFA 407 (412)
T ss_dssp HHHHHHHHH-HHTSEEECCGGGCCHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHS----CC-HHHHHTTHHHHH
T ss_pred HHHHHHHHH-HcCCEEecCcccCCHHHHHHHHHHHHhC--HHHHHHHHHHHHHHhcC----CC-HHHHHHHHHHHh
Confidence 999999994 789999997 578999999999999999 99999999999988873 43 444455555544
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.5e-29 Score=242.32 Aligned_cols=320 Identities=16% Similarity=0.130 Sum_probs=201.9
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchh-HHhhccccccccccCCCCceEEecCC-CCCCC-CCCCC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYD-RVIRHSSDAFSRYMQIPGFQFKTLTD-GLPRD-HPRTP 83 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~ 83 (460)
.||+|+..|+.||++|.++||++|+++||+|+|++++...+ .+.+.. ++.++.++. +++.. .....
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~-----------g~~~~~i~~~~~~~~~~~~~~ 71 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKA-----------GLPLHLIQVSGLRGKGLKSLV 71 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGG-----------TCCEEECC-------------
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhhc-----------CCcEEEEECCCcCCCCHHHHH
Confidence 39999999999999999999999999999999999755433 343333 366776653 22211 11112
Q ss_pred CChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcc--hHHHHHHHhCCceEEEecchhHHHHHHhhccccccCCCC
Q 012587 84 DKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS--RAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGEL 161 (460)
Q Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (460)
..+..++..+ .....++++. +||+||++..+. .+..+|+.+|||++....... +.
T Consensus 72 ~~~~~~~~~~-----~~~~~~l~~~--~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~n~~---------~G------- 128 (365)
T 3s2u_A 72 KAPLELLKSL-----FQALRVIRQL--RPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQNAV---------AG------- 128 (365)
T ss_dssp -CHHHHHHHH-----HHHHHHHHHH--CCSEEEECSSSTHHHHHHHHHHTTCCEEEEECSSS---------CC-------
T ss_pred HHHHHHHHHH-----HHHHHHHHhc--CCCEEEEcCCcchHHHHHHHHHcCCCEEEEecchh---------hh-------
Confidence 2222222222 3346677887 999999986655 467889999999997532210 00
Q ss_pred CCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCCCceeEeCccccccccCCC
Q 012587 162 PIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPNIYSIGPLNAHLKVRIP 241 (460)
Q Consensus 162 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~~~~~~vG~~~~~~~~~~~ 241 (460)
...+... +..+.++ .++++..+ ...+.+++|..........+
T Consensus 129 --------------------------~~nr~l~--~~a~~v~-~~~~~~~~---------~~~k~~~~g~pvr~~~~~~~ 170 (365)
T 3s2u_A 129 --------------------------TANRSLA--PIARRVC-EAFPDTFP---------ASDKRLTTGNPVRGELFLDA 170 (365)
T ss_dssp --------------------------HHHHHHG--GGCSEEE-ESSTTSSC---------C---CEECCCCCCGGGCCCT
T ss_pred --------------------------hHHHhhc--cccceee-eccccccc---------CcCcEEEECCCCchhhccch
Confidence 0011111 2233333 33332111 22456777765543221100
Q ss_pred ccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhC----CCcEEEEEccCCCCCCCCCCCC
Q 012587 242 EKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHS----KKSFLWVIRPDLISGKDGENQI 317 (460)
Q Consensus 242 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~----~~~~i~~~~~~~~~~~~~~~~~ 317 (460)
.......+++++|+|..||.... ...+.+.++++.+ +..+++.++.. ..+.+
T Consensus 171 ----------------~~~~~~~~~~~~ilv~gGs~g~~--~~~~~~~~al~~l~~~~~~~vi~~~G~~------~~~~~ 226 (365)
T 3s2u_A 171 ----------------HARAPLTGRRVNLLVLGGSLGAE--PLNKLLPEALAQVPLEIRPAIRHQAGRQ------HAEIT 226 (365)
T ss_dssp ----------------TSSCCCTTSCCEEEECCTTTTCS--HHHHHHHHHHHTSCTTTCCEEEEECCTT------THHHH
T ss_pred ----------------hhhcccCCCCcEEEEECCcCCcc--ccchhhHHHHHhcccccceEEEEecCcc------ccccc
Confidence 00111134678899999998743 3334455666654 34566665421 10011
Q ss_pred chHHHHHhcCCceeeeecCh-HhhhcccccccccccCChhHHHHHHHhCCceeccccc----ccchhhHHHHHhhhceee
Q 012587 318 PEELLEATKERGCIAGWVPQ-EEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSF----ADQQINSRFVGEVWKLGL 392 (460)
Q Consensus 318 ~~~~~~~~~~n~~~~~~vp~-~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~----~DQ~~na~~~~e~~G~g~ 392 (460)
... ....+.|+.+.+|+++ .++|+.+++ +|||+|.+|++|++++|+|+|++|.. .+|..||+.++ +.|+|.
T Consensus 227 ~~~-~~~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~-~~G~a~ 302 (365)
T 3s2u_A 227 AER-YRTVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLV-RSGAGR 302 (365)
T ss_dssp HHH-HHHTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHH-TTTSEE
T ss_pred cce-ecccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHH-HCCCEE
Confidence 111 1235668899999997 689999998 99999999999999999999999973 58999999995 789999
Q ss_pred eec-CCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHH
Q 012587 393 DIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKK 431 (460)
Q Consensus 393 ~~~-~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~ 431 (460)
.+. ++++++.|.++|.++|+| ++.+ ++|++..++
T Consensus 303 ~l~~~~~~~~~L~~~i~~ll~d--~~~~---~~m~~~a~~ 337 (365)
T 3s2u_A 303 LLPQKSTGAAELAAQLSEVLMH--PETL---RSMADQARS 337 (365)
T ss_dssp ECCTTTCCHHHHHHHHHHHHHC--THHH---HHHHHHHHH
T ss_pred EeecCCCCHHHHHHHHHHHHCC--HHHH---HHHHHHHHh
Confidence 998 789999999999999998 5543 345555554
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-26 Score=200.00 Aligned_cols=162 Identities=20% Similarity=0.395 Sum_probs=134.8
Q ss_pred cchhhhhhhhcCCCCcEEEEEecCcc-cCCHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCcee
Q 012587 253 IDRSCMAWLDKQPKQSVIYVSFGSIA-VMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCI 331 (460)
Q Consensus 253 ~~~~l~~~l~~~~~~~~V~vs~GS~~-~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~ 331 (460)
.+.++.+|++..+++++|||++||.. ......+..+++++++.+.+++|+.++.. ++ ..++|+.+
T Consensus 7 l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~----------~~----~~~~~v~~ 72 (170)
T 2o6l_A 7 LPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNK----------PD----TLGLNTRL 72 (170)
T ss_dssp CCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSC----------CT----TCCTTEEE
T ss_pred CCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcC----------cc----cCCCcEEE
Confidence 46678999986667899999999986 34567788899999988999999885321 11 14569999
Q ss_pred eeecChHhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeec-CCcchHHHHHHHHHH
Q 012587 332 AGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIK-DLCDRNIVEKAVNDL 410 (460)
Q Consensus 332 ~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~-~~~~~~~l~~~i~~~ 410 (460)
.+|+|+.+++.++.+++||||||.||++||+++|+|+|++|...||..||+++ ++.|+|+.+. ++++.+.|.++|.++
T Consensus 73 ~~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l-~~~g~g~~~~~~~~~~~~l~~~i~~l 151 (170)
T 2o6l_A 73 YKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHM-KARGAAVRVDFNTMSSTDLLNALKRV 151 (170)
T ss_dssp ESSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH-HTTTSEEECCTTTCCHHHHHHHHHHH
T ss_pred ecCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHH-HHcCCeEEeccccCCHHHHHHHHHHH
Confidence 99999999995444445999999999999999999999999999999999999 5789999997 678999999999999
Q ss_pred HhHhHHHHHHHHHHHHHHHHH
Q 012587 411 MVERKEEFMESADRMANLAKK 431 (460)
Q Consensus 411 l~~~~~~~~~~a~~l~~~~~~ 431 (460)
++| ++|+++++++++.+++
T Consensus 152 l~~--~~~~~~a~~~~~~~~~ 170 (170)
T 2o6l_A 152 IND--PSYKENVMKLSRIQHD 170 (170)
T ss_dssp HHC--HHHHHHHHHHC-----
T ss_pred HcC--HHHHHHHHHHHHHhhC
Confidence 998 8999999999988763
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=2.3e-20 Score=180.66 Aligned_cols=333 Identities=12% Similarity=0.066 Sum_probs=203.3
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchh-HHhhccccccccccCCCCceEEecCCCCCCCCCCCCCC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYD-RVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPDK 85 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (460)
|||++++.+..||..+.+.|+++|.++||+|++++...... ...+.. ++.+..++...... ..
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~-----------g~~~~~~~~~~~~~-----~~ 70 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKH-----------GIEIDFIRISGLRG-----KG 70 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGG-----------TCEEEECCCCCCTT-----CC
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhcccc-----------CCceEEecCCccCc-----Cc
Confidence 79999998888999999999999999999999999754322 121211 36666654211000 11
Q ss_pred hHHHHH---HHHhhCcHHHHHHHHcCCCCccEEEEcCCc--chHHHHHHHhCCceEEEecchhHHHHHHhhccccccCCC
Q 012587 86 FPELVD---SLNCATPPLLKEMVSDSKSPVNCIITDGYM--SRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGE 160 (460)
Q Consensus 86 ~~~~~~---~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~--~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~ 160 (460)
....+. .... ....+..++++. +||+|+++... ..+..++..+|+|+|....... +.
T Consensus 71 ~~~~~~~~~~~~~-~~~~l~~~l~~~--~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~---------~~------ 132 (364)
T 1f0k_A 71 IKALIAAPLRIFN-AWRQARAIMKAY--KPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGI---------AG------ 132 (364)
T ss_dssp HHHHHTCHHHHHH-HHHHHHHHHHHH--CCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSS---------CC------
T ss_pred cHHHHHHHHHHHH-HHHHHHHHHHhc--CCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCCC---------Cc------
Confidence 111110 1111 223456667776 99999998643 2467788899999986433210 00
Q ss_pred CCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCCCceeEeCccccccccCC
Q 012587 161 LPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPNIYSIGPLNAHLKVRI 240 (460)
Q Consensus 161 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~~~~~~vG~~~~~~~~~~ 240 (460)
. ..+.. ....+.+++.+.. .++++..+|........
T Consensus 133 ------------------------~---~~~~~--~~~~d~v~~~~~~-------------~~~~~~~i~n~v~~~~~-- 168 (364)
T 1f0k_A 133 ------------------------L---TNKWL--AKIATKVMQAFPG-------------AFPNAEVVGNPVRTDVL-- 168 (364)
T ss_dssp ------------------------H---HHHHH--TTTCSEEEESSTT-------------SSSSCEECCCCCCHHHH--
T ss_pred ------------------------H---HHHHH--HHhCCEEEecChh-------------hcCCceEeCCccchhhc--
Confidence 0 00111 1334555544321 12245555543321110
Q ss_pred CccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhC--CCcEEEEEccCCCCCCCCCCCCc
Q 012587 241 PEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHS--KKSFLWVIRPDLISGKDGENQIP 318 (460)
Q Consensus 241 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~~~ 318 (460)
.... ..+.+....++++|++..|+... ......++++++.+ +.++++.++.+ . .
T Consensus 169 -----------~~~~-~~~~~~~~~~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~~------~----~ 224 (364)
T 1f0k_A 169 -----------ALPL-PQQRLAGREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKG------S----Q 224 (364)
T ss_dssp -----------TSCC-HHHHHTTCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTT------C----H
T ss_pred -----------ccch-hhhhcccCCCCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcCCc------h----H
Confidence 0000 11112223356778888888753 33444555666544 45656666421 1 1
Q ss_pred hHHHH---Hhc-CCceeeeecC-hHhhhcccccccccccCChhHHHHHHHhCCceeccccc---ccchhhHHHHHhhhce
Q 012587 319 EELLE---ATK-ERGCIAGWVP-QEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSF---ADQQINSRFVGEVWKL 390 (460)
Q Consensus 319 ~~~~~---~~~-~n~~~~~~vp-~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~---~DQ~~na~~~~e~~G~ 390 (460)
+.+.+ +.+ +|+.+.+|++ ...+++.+++ +|+++|.+++.||+++|+|+|+.|.. .||..|+..+. +.|.
T Consensus 225 ~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~-~~g~ 301 (364)
T 1f0k_A 225 QSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLE-KAGA 301 (364)
T ss_dssp HHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHH-HTTS
T ss_pred HHHHHHHhhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHH-hCCc
Confidence 22221 222 5899999995 4889999998 99999999999999999999999987 69999999995 6799
Q ss_pred eeeec-CCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHhh
Q 012587 391 GLDIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKMM 453 (460)
Q Consensus 391 g~~~~-~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~~ 453 (460)
|..++ .+.+.+.|.++|.++ | ++.+++..+-+++.. ...+++.+.+.++.+...
T Consensus 302 g~~~~~~d~~~~~la~~i~~l--~--~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~y~~ 356 (364)
T 1f0k_A 302 AKIIEQPQLSVDAVANTLAGW--S--RETLLTMAERARAAS-----IPDATERVANEVSRVARA 356 (364)
T ss_dssp EEECCGGGCCHHHHHHHHHTC--C--HHHHHHHHHHHHHTC-----CTTHHHHHHHHHHHHHTT
T ss_pred EEEeccccCCHHHHHHHHHhc--C--HHHHHHHHHHHHHhh-----ccCHHHHHHHHHHHHHHH
Confidence 99886 556799999999999 4 666655544443332 134455555555665554
|
| >3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=1.7e-15 Score=139.22 Aligned_cols=260 Identities=13% Similarity=0.121 Sum_probs=161.6
Q ss_pred cEEEEEcCC----CCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCC
Q 012587 7 VHVAILPLP----AVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRT 82 (460)
Q Consensus 7 ~~il~~~~~----~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (460)
|||+|-+-+ +.||+.++++||++|+ +|+|++...... +.+.. ++.+..++.
T Consensus 1 mki~ir~Da~~~IG~GHvmRcl~LA~~l~----~v~F~~~~~~~~-~~~~~-----------g~~v~~l~~--------- 55 (282)
T 3hbm_A 1 MKVLFRSDSSSQIGFGHIKRDLVLAKQYS----DVSFACLPLEGS-LIDEI-----------PYPVYELSS--------- 55 (282)
T ss_dssp CCEEEEECCBTTTBSHHHHHHHHHHTTCS----SEEEEECCCTTC-CGGGC-----------CSCEEECSS---------
T ss_pred CEEEEEEecCCCccccHHHHHHHHHHHHH----hCEEEEecCcHh-HHHHC-----------CCeEEEcCc---------
Confidence 578887664 7899999999999999 899999744222 22211 244454442
Q ss_pred CCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcc---hHHHHHHHhCCceEEEecchhHHHHHHhhccccccCC
Q 012587 83 PDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS---RAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAG 159 (460)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~---~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 159 (460)
. -.+.+.+++++. ++|+||.|.+.. +-..+....|++++.+.-... .
T Consensus 56 -~------------d~~~~~~~l~~~--~~d~lIvD~Y~~~~~~~~~lk~~~~~~i~~iDD~~~------~--------- 105 (282)
T 3hbm_A 56 -E------------SIYELINLIKEE--KFELLIIDHYGISVDDEKLIKLETGVKILSFDDEIK------P--------- 105 (282)
T ss_dssp -S------------CHHHHHHHHHHH--TCSEEEEECTTCCHHHHHHHHHHHCCEEEEECSSCC------C---------
T ss_pred -c------------CHHHHHHHHHhC--CCCEEEEECCCCCHHHHHHHHHhcCcEEEEEecCCC------c---------
Confidence 0 113445666665 999999998877 333334446888877543210 0
Q ss_pred CCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCCC--ceeEeCccccccc
Q 012587 160 ELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCP--NIYSIGPLNAHLK 237 (460)
Q Consensus 160 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~~--~~~~vG~~~~~~~ 237 (460)
..++. ++|....-+. .++ .. ..| ..+..||-....+
T Consensus 106 -------------------------------------~~~Dl-lin~~~~~~~--~~Y-~~-~~p~~~~~l~G~~Y~~lR 143 (282)
T 3hbm_A 106 -------------------------------------HHCDI-LLNVNAYAKA--SDY-EG-LVPFKCEVRCGFSYALIR 143 (282)
T ss_dssp -------------------------------------CCCSE-EEECSTTCCG--GGG-TT-TCC-CCEEEESGGGCCCC
T ss_pred -------------------------------------ccCCE-EEeCCcccch--hhc-cc-cCCCCCeEeeCCcccccC
Confidence 11333 2332211110 000 11 112 2467787433222
Q ss_pred cCCCccccCCCCccccchhhhhhhh-cCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCC
Q 012587 238 VRIPEKTYSSSSLWKIDRSCMAWLD-KQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQ 316 (460)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~l~~~l~-~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~ 316 (460)
+++.+.-. .....+.|+|++|.... .+....+++++.... ++.++.+.+ . .
T Consensus 144 -----------------~eF~~~~~~~r~~~~~ILv~~GG~d~--~~l~~~vl~~L~~~~-~i~vv~G~~------~--~ 195 (282)
T 3hbm_A 144 -----------------EEFYQEAKENRKKKYDFFICMGGTDI--KNLSLQIASELPKTK-IISIATSSS------N--P 195 (282)
T ss_dssp -----------------HHHHHHTTCCCCCCEEEEEECCSCCT--TCHHHHHHHHSCTTS-CEEEEECTT------C--T
T ss_pred -----------------HHHHHhhhhccccCCeEEEEECCCch--hhHHHHHHHHhhcCC-CEEEEECCC------c--h
Confidence 11111110 12245789999997542 235667778877654 566666432 1 2
Q ss_pred CchHHHHH--hcCCceeeeecCh-HhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHHHHHhhhceeee
Q 012587 317 IPEELLEA--TKERGCIAGWVPQ-EEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLD 393 (460)
Q Consensus 317 ~~~~~~~~--~~~n~~~~~~vp~-~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~ 393 (460)
..+.+.+. ...|+.+..|+++ .++|..+++ +|++|| +|++|+++.|+|++++|...+|..||+.++ +.|++..
T Consensus 196 ~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~aDl--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~-~~G~~~~ 271 (282)
T 3hbm_A 196 NLKKLQKFAKLHNNIRLFIDHENIAKLMNESNK--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLA-KKGYEVE 271 (282)
T ss_dssp THHHHHHHHHTCSSEEEEESCSCHHHHHHTEEE--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHH-HTTCEEE
T ss_pred HHHHHHHHHhhCCCEEEEeCHHHHHHHHHHCCE--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHH-HCCCEEE
Confidence 22333221 2348999999986 579999998 999999 899999999999999999999999999995 7899998
Q ss_pred ec
Q 012587 394 IK 395 (460)
Q Consensus 394 ~~ 395 (460)
+.
T Consensus 272 ~~ 273 (282)
T 3hbm_A 272 YK 273 (282)
T ss_dssp CG
T ss_pred cc
Confidence 85
|
| >2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A | Back alignment and structure |
|---|
Probab=99.62 E-value=1e-15 Score=134.97 Aligned_cols=132 Identities=12% Similarity=0.066 Sum_probs=95.3
Q ss_pred CCCCcEEEEEecCcccCCHHHHHHH-----HHHHhhCC-CcEEEEEccCCCCCCCCCCCCchHHHHHh---------c--
Q 012587 264 QPKQSVIYVSFGSIAVMSRDQLIEF-----YYGLVHSK-KSFLWVIRPDLISGKDGENQIPEELLEAT---------K-- 326 (460)
Q Consensus 264 ~~~~~~V~vs~GS~~~~~~~~~~~~-----~~al~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~---------~-- 326 (460)
..++++|||+.||... -.+.+..+ ++++...+ .++++.++..... ....+.... |
T Consensus 25 ~~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~-------~~~~~~~~~~~~~~~~l~p~~ 96 (224)
T 2jzc_A 25 IIEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSS-------EFEHLVQERGGQRESQKIPID 96 (224)
T ss_dssp CCCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCC-------CCCSHHHHHTCEECSCCCSSC
T ss_pred CCCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchh-------hHHHHHHhhhccccccccccc
Confidence 3468999999999732 23444433 47887777 7888888643210 011111001 1
Q ss_pred ---------------C--CceeeeecCh-Hhhhc-ccccccccccCChhHHHHHHHhCCceeccccc----ccchhhHHH
Q 012587 327 ---------------E--RGCIAGWVPQ-EEVLA-HSAVGGFLTHCGWNSTLESIVAGMPMICWPSF----ADQQINSRF 383 (460)
Q Consensus 327 ---------------~--n~~~~~~vp~-~~il~-~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~----~DQ~~na~~ 383 (460)
. ++.+.+|+++ .++|+ .+++ +|||||.||++|++++|+|+|++|.. .||..||++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~ 174 (224)
T 2jzc_A 97 QFGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADK 174 (224)
T ss_dssp TTCTTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHH
T ss_pred cccccccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHH
Confidence 2 3445688876 58999 9998 99999999999999999999999984 469999999
Q ss_pred HHhhhceeeeecCCcchHHHHHHHHHH
Q 012587 384 VGEVWKLGLDIKDLCDRNIVEKAVNDL 410 (460)
Q Consensus 384 ~~e~~G~g~~~~~~~~~~~l~~~i~~~ 410 (460)
++ +.|+++.+ +.+.|.++|.++
T Consensus 175 l~-~~G~~~~~----~~~~L~~~i~~l 196 (224)
T 2jzc_A 175 FV-ELGYVWSC----APTETGLIAGLR 196 (224)
T ss_dssp HH-HHSCCCEE----CSCTTTHHHHHH
T ss_pred HH-HCCCEEEc----CHHHHHHHHHHH
Confidence 95 78998766 667777778776
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.47 E-value=8.3e-13 Score=128.72 Aligned_cols=328 Identities=11% Similarity=0.044 Sum_probs=171.6
Q ss_pred CCCCcEEEEEcCCCCCCHHHHHHHHHHHHhC-CCeEEEEeCccchh---HHhhccccccccccCCCCce-EEecCCCCCC
Q 012587 3 KQDHVHVAILPLPAVGHVNSMLNLAELLGHA-GIKITFLNTEHYYD---RVIRHSSDAFSRYMQIPGFQ-FKTLTDGLPR 77 (460)
Q Consensus 3 ~~~~~~il~~~~~~~Gh~~p~l~La~~L~~r-GH~Vt~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 77 (460)
+|.||||++++ |++....=+.+|.++|.++ |+++.++.+...++ .+.+..+ +. -+.+. .
T Consensus 22 ~~~m~ki~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~~~~-----------i~~~~~l~--~-- 85 (396)
T 3dzc_A 22 SNAMKKVLIVF-GTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLELFS-----------ITPDFDLN--I-- 85 (396)
T ss_dssp --CCEEEEEEE-CSHHHHHHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHHHTT-----------CCCSEECC--C--
T ss_pred hCCCCeEEEEE-eccHhHHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhcC-----------CCCceeee--c--
Confidence 46788998776 6666677778899999987 78987555544433 2222211 10 00111 0
Q ss_pred CCCCCCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcC--Cc-chHHHHHHHhCCceEEEecchhHHHHHHhhccc
Q 012587 78 DHPRTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDG--YM-SRAIDAAREVGVSIIYFRTISACAFWSFHCIPD 154 (460)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~--~~-~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~ 154 (460)
.....+...... .....+.++++++ +||+|+.-. .+ +.+..+|..+|||++.+..... . +.
T Consensus 86 --~~~~~~~~~~~~----~~~~~l~~~l~~~--kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~ag~r-------s-~~ 149 (396)
T 3dzc_A 86 --MEPGQTLNGVTS----KILLGMQQVLSSE--QPDVVLVHGDTATTFAASLAAYYQQIPVGHVEAGLR-------T-GN 149 (396)
T ss_dssp --CCTTCCHHHHHH----HHHHHHHHHHHHH--CCSEEEEETTSHHHHHHHHHHHTTTCCEEEETCCCC-------C-SC
T ss_pred --CCCCCCHHHHHH----HHHHHHHHHHHhc--CCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCcc-------c-cc
Confidence 001123333222 2335677888887 999998632 22 3457889999999876432100 0 00
Q ss_pred cccCCCCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCC--CceeEeCcc
Q 012587 155 IIDAGELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSC--PNIYSIGPL 232 (460)
Q Consensus 155 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~--~~~~~vG~~ 232 (460)
....+.+...+.. ....++.+++.+-.. .+....... .+++.+|-.
T Consensus 150 --------------------------~~~~~~~~~~r~~-~~~~a~~~~~~se~~-----~~~l~~~G~~~~ki~vvGn~ 197 (396)
T 3dzc_A 150 --------------------------IYSPWPEEGNRKL-TAALTQYHFAPTDTS-----RANLLQENYNAENIFVTGNT 197 (396)
T ss_dssp --------------------------TTSSTTHHHHHHH-HHHTCSEEEESSHHH-----HHHHHHTTCCGGGEEECCCH
T ss_pred --------------------------cccCCcHHHHHHH-HHHhcCEEECCCHHH-----HHHHHHcCCCcCcEEEECCc
Confidence 0000111111111 013456666666321 111122022 358888843
Q ss_pred ccccccCCCccccCCCCcccc----chhhhhhhh-cCCCCcEEEEEecCcccCCHHHHHHHHHHHhhC-----CCcEEEE
Q 012587 233 NAHLKVRIPEKTYSSSSLWKI----DRSCMAWLD-KQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHS-----KKSFLWV 302 (460)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~----~~~l~~~l~-~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~i~~ 302 (460)
........+ +.... .+++.+-+. ..+++++|+++.+-..+.... +..++++++.+ +.++++.
T Consensus 198 ~~d~~~~~~-------~~~~~~~~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~~~-~~~ll~A~~~l~~~~~~~~~v~~ 269 (396)
T 3dzc_A 198 VIDALLAVR-------EKIHTDMDLQATLESQFPMLDASKKLILVTGHRRESFGGG-FERICQALITTAEQHPECQILYP 269 (396)
T ss_dssp HHHHHHHHH-------HHHHHCHHHHHHHHHTCTTCCTTSEEEEEECSCBCCCTTH-HHHHHHHHHHHHHHCTTEEEEEE
T ss_pred HHHHHHHhh-------hhcccchhhHHHHHHHhCccCCCCCEEEEEECCcccchhH-HHHHHHHHHHHHHhCCCceEEEE
Confidence 221110000 00000 012222222 113567787776322222222 45566665543 4556655
Q ss_pred EccCCCCCCCCCCCCchHHHHH--hcCCceeeeecC---hHhhhcccccccccccCChhHHHHHHHhCCceecccccccc
Q 012587 303 IRPDLISGKDGENQIPEELLEA--TKERGCIAGWVP---QEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQ 377 (460)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~--~~~n~~~~~~vp---~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ 377 (460)
.+.+ + .+...+.+. ..+|+.+.++++ ...+++.+++ +|+-.| |.+.||.++|+|+|+.....++
T Consensus 270 ~g~~-------~-~~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~ 338 (396)
T 3dzc_A 270 VHLN-------P-NVREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTER 338 (396)
T ss_dssp CCBC-------H-HHHHHHHHHTTTCTTEEEECCCCHHHHHHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSC
T ss_pred eCCC-------h-HHHHHHHHHHcCCCCEEEeCCCCHHHHHHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcc
Confidence 4311 0 111122221 235888877775 4577888997 898887 6668999999999998655555
Q ss_pred hhhHHHHHhhhceeeeecCCcchHHHHHHHHHHHhHhHHHHHHHH
Q 012587 378 QINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVERKEEFMESA 422 (460)
Q Consensus 378 ~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~a 422 (460)
++ .+ +.|.++.+. .+.++|.+++.++|+| +..+++.
T Consensus 339 ~e---~v--~~G~~~lv~--~d~~~l~~ai~~ll~d--~~~~~~m 374 (396)
T 3dzc_A 339 PE---AV--AAGTVKLVG--TNQQQICDALSLLLTD--PQAYQAM 374 (396)
T ss_dssp HH---HH--HHTSEEECT--TCHHHHHHHHHHHHHC--HHHHHHH
T ss_pred hH---HH--HcCceEEcC--CCHHHHHHHHHHHHcC--HHHHHHH
Confidence 32 23 358776553 2799999999999987 6655443
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.47 E-value=5.9e-12 Score=121.95 Aligned_cols=324 Identities=14% Similarity=0.080 Sum_probs=166.6
Q ss_pred CCCCCCcEEEEEcCCCCCCHHHHHHHHHHHHhC-CCeEEEEeCccchhHHhhccccccccccCCCCceE-EecCCCCCCC
Q 012587 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHA-GIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQF-KTLTDGLPRD 78 (460)
Q Consensus 1 ~~~~~~~~il~~~~~~~Gh~~p~l~La~~L~~r-GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 78 (460)
|+. .||||++++.. .+.......|+++|.++ ||+|.++++........+... ..++.+ ..++- ..
T Consensus 1 ~~~-~mmkIl~v~~~-~~~~~~~~~l~~~L~~~~g~~v~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~--~~- 67 (376)
T 1v4v_A 1 MEG-GMKRVVLAFGT-RPEATKMAPVYLALRGIPGLKPLVLLTGQHREQLRQALS--------LFGIQEDRNLDV--MQ- 67 (376)
T ss_dssp ----CCEEEEEEECS-HHHHHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHH--------TTTCCCSEECCC--CS-
T ss_pred CCC-CceEEEEEEec-cHHHHHHHHHHHHHHhCCCCceEEEEcCCcHHHHHHHHH--------HcCCCccccccc--CC-
Confidence 444 36899999854 33344567789999998 899887766443222211100 001221 12211 00
Q ss_pred CCCCCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCC--c-chHHHHHHHhCCceEEEecchhHHHHHHhhcccc
Q 012587 79 HPRTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGY--M-SRAIDAAREVGVSIIYFRTISACAFWSFHCIPDI 155 (460)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~--~-~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~ 155 (460)
...+....+.. ....+..++++. +||+|++... . +.+..+|..+|||++.+..... . ..
T Consensus 68 ---~~~~~~~~~~~----~~~~l~~~l~~~--~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~-------~-~~- 129 (376)
T 1v4v_A 68 ---ERQALPDLAAR----ILPQAARALKEM--GADYVLVHGDTLTTFAVAWAAFLEGIPVGHVEAGLR-------S-GN- 129 (376)
T ss_dssp ---SCCCHHHHHHH----HHHHHHHHHHHT--TCSEEEEESSCHHHHHHHHHHHHTTCCEEEETCCCC-------C-SC-
T ss_pred ---CCccHHHHHHH----HHHHHHHHHHHc--CCCEEEEeCChHHHHHHHHHHHHhCCCEEEEeCCCc-------c-cc-
Confidence 11222221111 124567778886 9999998422 2 2456788999999875432210 0 00
Q ss_pred ccCCCCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCC--CceeEeCccc
Q 012587 156 IDAGELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSC--PNIYSIGPLN 233 (460)
Q Consensus 156 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~--~~~~~vG~~~ 233 (460)
... ....... ..... ..++.++..+...- +....... .++..+|...
T Consensus 130 -------------------~~~--~~~~~~~---~~~~~--~~~~~~~~~s~~~~-----~~l~~~g~~~~ki~vi~n~~ 178 (376)
T 1v4v_A 130 -------------------LKE--PFPEEAN---RRLTD--VLTDLDFAPTPLAK-----ANLLKEGKREEGILVTGQTG 178 (376)
T ss_dssp -------------------TTS--STTHHHH---HHHHH--HHCSEEEESSHHHH-----HHHHTTTCCGGGEEECCCHH
T ss_pred -------------------ccC--CCchHHH---HHHHH--HHhceeeCCCHHHH-----HHHHHcCCCcceEEEECCch
Confidence 000 0000011 11111 33556666653221 11122011 2466777432
Q ss_pred cccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhC-----CCcEEEEEccCCC
Q 012587 234 AHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHS-----KKSFLWVIRPDLI 308 (460)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~ 308 (460)
....... ....++.+.+ +++++|+++.|...... .+..++++++.+ +.++++..+.+
T Consensus 179 ~d~~~~~-----------~~~~~~~~~~---~~~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~-- 240 (376)
T 1v4v_A 179 VDAVLLA-----------AKLGRLPEGL---PEGPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLN-- 240 (376)
T ss_dssp HHHHHHH-----------HHHCCCCTTC---CSSCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSC--
T ss_pred HHHHhhh-----------hhhhHHHHhc---CCCCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCC--
Confidence 1110000 0000111112 24567778888654322 234455555432 45555544311
Q ss_pred CCCCCCCCCchHHHHHh--cCCceeeeecCh---HhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHHH
Q 012587 309 SGKDGENQIPEELLEAT--KERGCIAGWVPQ---EEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRF 383 (460)
Q Consensus 309 ~~~~~~~~~~~~~~~~~--~~n~~~~~~vp~---~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~ 383 (460)
..+.+.+.+.. .+++.+.+++++ ..+++.+++ +|+.+| |.+.||+++|+|+|+.+..+++...
T Consensus 241 ------~~~~~~l~~~~~~~~~v~~~g~~g~~~~~~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~~--- 308 (376)
T 1v4v_A 241 ------PVVREAVFPVLKGVRNFVLLDPLEYGSMAALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPEG--- 308 (376)
T ss_dssp ------HHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHHH---
T ss_pred ------HHHHHHHHHHhccCCCEEEECCCCHHHHHHHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchhh---
Confidence 00112222211 358888866665 588899998 888873 5566999999999998876666652
Q ss_pred HHhhhceeeeecCCcchHHHHHHHHHHHhHhHHHHHHHH
Q 012587 384 VGEVWKLGLDIKDLCDRNIVEKAVNDLMVERKEEFMESA 422 (460)
Q Consensus 384 ~~e~~G~g~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~a 422 (460)
+ +.|.|..+. .+.++|.+++.++++| ++.+++.
T Consensus 309 ~--~~g~g~lv~--~d~~~la~~i~~ll~d--~~~~~~~ 341 (376)
T 1v4v_A 309 L--KAGILKLAG--TDPEGVYRVVKGLLEN--PEELSRM 341 (376)
T ss_dssp H--HHTSEEECC--SCHHHHHHHHHHHHTC--HHHHHHH
T ss_pred h--cCCceEECC--CCHHHHHHHHHHHHhC--hHhhhhh
Confidence 3 347887774 4899999999999997 6544443
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=2.7e-11 Score=117.76 Aligned_cols=324 Identities=13% Similarity=0.082 Sum_probs=173.9
Q ss_pred CCCCcEEEEEcC--C--CCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCC
Q 012587 3 KQDHVHVAILPL--P--AVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRD 78 (460)
Q Consensus 3 ~~~~~~il~~~~--~--~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (460)
||+||||++++. + ..|.-.-...+++.| +||+|++++............. ..++.+..++.....
T Consensus 1 M~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~- 69 (394)
T 3okp_A 1 MSASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYDK--------TLDYEVIRWPRSVML- 69 (394)
T ss_dssp ---CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHHT--------TCSSEEEEESSSSCC-
T ss_pred CCCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhcc--------ccceEEEEccccccc-
Confidence 356889999985 3 467778888999999 7999999997554331111100 224666666532111
Q ss_pred CCCCCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcc--hHHHHHHHhCCceEEEecchhHHHHHHhhccccc
Q 012587 79 HPRTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS--RAIDAAREVGVSIIYFRTISACAFWSFHCIPDII 156 (460)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 156 (460)
... .....+.+++++. +||+|++..... ....++..+|+|.+.+......... .
T Consensus 70 -----~~~---------~~~~~l~~~~~~~--~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~---~----- 125 (394)
T 3okp_A 70 -----PTP---------TTAHAMAEIIRER--EIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGW---S----- 125 (394)
T ss_dssp -----SCH---------HHHHHHHHHHHHT--TCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHHH---T-----
T ss_pred -----cch---------hhHHHHHHHHHhc--CCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhhh---h-----
Confidence 111 1224556777776 999999765433 4566688899984443332211100 0
Q ss_pred cCCCCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCCCceeEeCcccccc
Q 012587 157 DAGELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPNIYSIGPLNAHL 236 (460)
Q Consensus 157 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~~~~~~vG~~~~~~ 236 (460)
.........+. ....++.+++.+....+.- ..... ...++..+.......
T Consensus 126 -------------------------~~~~~~~~~~~--~~~~~d~ii~~s~~~~~~~-~~~~~--~~~~~~vi~ngv~~~ 175 (394)
T 3okp_A 126 -------------------------MLPGSRQSLRK--IGTEVDVLTYISQYTLRRF-KSAFG--SHPTFEHLPSGVDVK 175 (394)
T ss_dssp -------------------------TSHHHHHHHHH--HHHHCSEEEESCHHHHHHH-HHHHC--SSSEEEECCCCBCTT
T ss_pred -------------------------hcchhhHHHHH--HHHhCCEEEEcCHHHHHHH-HHhcC--CCCCeEEecCCcCHH
Confidence 01111222221 1256778888885432211 00000 113455554333211
Q ss_pred ccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCccc-CCHHHHHHHHHHHhhC--CCcEEEEEccCCCCCCCC
Q 012587 237 KVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAV-MSRDQLIEFYYGLVHS--KKSFLWVIRPDLISGKDG 313 (460)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~-~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~ 313 (460)
...... ......+.+-+.. +++..+++..|+... ...+.+...+..+.+. +.+++++ +.+
T Consensus 176 ~~~~~~--------~~~~~~~~~~~~~-~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~-G~g------- 238 (394)
T 3okp_A 176 RFTPAT--------PEDKSATRKKLGF-TDTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIV-GSG------- 238 (394)
T ss_dssp TSCCCC--------HHHHHHHHHHTTC-CTTCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEEE-CCC-------
T ss_pred HcCCCC--------chhhHHHHHhcCC-CcCceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEE-cCc-------
Confidence 110000 0011223333321 234456677888652 2333333333333332 4555544 211
Q ss_pred CCCCchHHHH---HhcCCceeeeecChH---hhhcccccccccc-----------cCChhHHHHHHHhCCceeccccccc
Q 012587 314 ENQIPEELLE---ATKERGCIAGWVPQE---EVLAHSAVGGFLT-----------HCGWNSTLESIVAGMPMICWPSFAD 376 (460)
Q Consensus 314 ~~~~~~~~~~---~~~~n~~~~~~vp~~---~il~~~~~~~~I~-----------HGG~gs~~eal~~GvP~l~~P~~~D 376 (460)
.....+.+ ...+++.+.+|+|+. .++..+++ +|. -|...++.||+++|+|+|+.+..
T Consensus 239 --~~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~-- 312 (394)
T 3okp_A 239 --RYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSG-- 312 (394)
T ss_dssp --TTHHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSST--
T ss_pred --hHHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHHHcCCCEEEeCCC--
Confidence 11222221 234789999999864 46788887 665 55567999999999999997643
Q ss_pred chhhHHHHHhhhceeeeecCCcchHHHHHHHHHHHhHhHHHHHHH
Q 012587 377 QQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVERKEEFMES 421 (460)
Q Consensus 377 Q~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~ 421 (460)
.....+ +. |.|..+ ..-+.+++.++|.++++| +..+++
T Consensus 313 --~~~e~i-~~-~~g~~~-~~~d~~~l~~~i~~l~~~--~~~~~~ 350 (394)
T 3okp_A 313 --GAPETV-TP-ATGLVV-EGSDVDKLSELLIELLDD--PIRRAA 350 (394)
T ss_dssp --TGGGGC-CT-TTEEEC-CTTCHHHHHHHHHHHHTC--HHHHHH
T ss_pred --ChHHHH-hc-CCceEe-CCCCHHHHHHHHHHHHhC--HHHHHH
Confidence 333344 33 466666 445899999999999997 554433
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.44 E-value=3.2e-12 Score=124.74 Aligned_cols=323 Identities=12% Similarity=0.049 Sum_probs=167.9
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhC--CCeEEEEeCccch---hHHhhccccccccccCCCCceE-EecCCCCCC
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHA--GIKITFLNTEHYY---DRVIRHSSDAFSRYMQIPGFQF-KTLTDGLPR 77 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~r--GH~Vt~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 77 (460)
|+||||++++ |++....=+..|.++|.++ |+++.++.+...+ +.+.+..+ +.. +.+. +.
T Consensus 25 m~~~kI~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~~tG~h~~m~~~~~~~~~-----------i~~~~~l~--v~- 89 (403)
T 3ot5_A 25 MAKIKVMSIF-GTRPEAIKMAPLVLALEKEPETFESTVVITAQHREMLDQVLEIFD-----------IKPDIDLD--IM- 89 (403)
T ss_dssp -CCEEEEEEE-CSHHHHHHHHHHHHHHHTCTTTEEEEEEECC-----CHHHHHHTT-----------CCCSEECC--CC-
T ss_pred cccceEEEEE-ecChhHHHHHHHHHHHHhCCCCCcEEEEEecCcHHHHHHHHHhcC-----------CCCCcccc--cC-
Confidence 5667998876 5555566668899999988 6887766554332 22222211 100 0111 00
Q ss_pred CCCCCCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCC---cchHHHHHHHhCCceEEEecchhHHHHHHhhccc
Q 012587 78 DHPRTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGY---MSRAIDAAREVGVSIIYFRTISACAFWSFHCIPD 154 (460)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~---~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~ 154 (460)
....+...... .....+.+++++. +||+|+.-.- .+.+..+|..+|||++.+..... . +.
T Consensus 90 ---~~~~~~~~~~~----~~~~~l~~~l~~~--kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~aglr-------s-~~ 152 (403)
T 3ot5_A 90 ---KKGQTLAEITS----RVMNGINEVIAAE--NPDIVLVHGDTTTSFAAGLATFYQQKMLGHVEAGLR-------T-WN 152 (403)
T ss_dssp ---C-CCCHHHHHH----HHHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCCCC-------C-SC
T ss_pred ---CCCCCHHHHHH----HHHHHHHHHHHHc--CCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCcc-------c-cc
Confidence 01123332222 2335677888887 9999986322 22467889999999876432100 0 00
Q ss_pred cccCCCCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCC--CceeEeCcc
Q 012587 155 IIDAGELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSC--PNIYSIGPL 232 (460)
Q Consensus 155 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~--~~~~~vG~~ 232 (460)
.+ ........+.. .. ..++.++..+-.. .+....... .+++.+|..
T Consensus 153 --------------------~~--~~~p~~~~r~~---~~--~~a~~~~~~se~~-----~~~l~~~Gi~~~~i~vvGn~ 200 (403)
T 3ot5_A 153 --------------------KY--SPFPEEMNRQL---TG--VMADIHFSPTKQA-----KENLLAEGKDPATIFVTGNT 200 (403)
T ss_dssp --------------------TT--SSTTHHHHHHH---HH--HHCSEEEESSHHH-----HHHHHHTTCCGGGEEECCCH
T ss_pred --------------------cc--cCCcHHHHHHH---HH--HhcCEEECCCHHH-----HHHHHHcCCCcccEEEeCCc
Confidence 00 00001111111 11 2345556555321 111122022 358888854
Q ss_pred ccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhh-----CCCcEEEEEccCC
Q 012587 233 NAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVH-----SKKSFLWVIRPDL 307 (460)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~-----~~~~~i~~~~~~~ 307 (460)
........++. ....+..+.+ .++++++++.|.....+. .+..++++++. .+.++++..+.+
T Consensus 201 ~~D~~~~~~~~--------~~~~~~~~~l---~~~~~vlv~~~r~~~~~~-~l~~ll~a~~~l~~~~~~~~~v~~~~~~- 267 (403)
T 3ot5_A 201 AIDALKTTVQK--------DYHHPILENL---GDNRLILMTAHRRENLGE-PMQGMFEAVREIVESREDTELVYPMHLN- 267 (403)
T ss_dssp HHHHHHHHSCT--------TCCCHHHHSC---TTCEEEEECCCCHHHHTT-HHHHHHHHHHHHHHHCTTEEEEEECCSC-
T ss_pred hHHHHHhhhhh--------hcchHHHHhc---cCCCEEEEEeCcccccCc-HHHHHHHHHHHHHHhCCCceEEEecCCC-
Confidence 32111000000 0011122222 356788887664322121 13445555443 244566554211
Q ss_pred CCCCCCCCCCchHHHHH--hcCCceeeeecC---hHhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHH
Q 012587 308 ISGKDGENQIPEELLEA--TKERGCIAGWVP---QEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSR 382 (460)
Q Consensus 308 ~~~~~~~~~~~~~~~~~--~~~n~~~~~~vp---~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~ 382 (460)
+ .+...+.+. ..+|+.+.++++ ...+++.+++ +|+-.|..+ .||.++|+|+|++|...++++
T Consensus 268 ------~-~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~~~ad~--vv~~SGg~~-~EA~a~g~PvV~~~~~~~~~e--- 334 (403)
T 3ot5_A 268 ------P-AVREKAMAILGGHERIHLIEPLDAIDFHNFLRKSYL--VFTDSGGVQ-EEAPGMGVPVLVLRDTTERPE--- 334 (403)
T ss_dssp ------H-HHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHEEE--EEECCHHHH-HHGGGTTCCEEECCSSCSCHH---
T ss_pred ------H-HHHHHHHHHhCCCCCEEEeCCCCHHHHHHHHHhcCE--EEECCccHH-HHHHHhCCCEEEecCCCcchh---
Confidence 0 111111111 235888888886 4577888887 888775333 799999999999977667664
Q ss_pred HHHhhhceeeeecCCcchHHHHHHHHHHHhHhHHHHHHHH
Q 012587 383 FVGEVWKLGLDIKDLCDRNIVEKAVNDLMVERKEEFMESA 422 (460)
Q Consensus 383 ~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~a 422 (460)
.+ +.|.|+.+. .+.++|.+++.++|+| +..+++.
T Consensus 335 ~v--~~g~~~lv~--~d~~~l~~ai~~ll~~--~~~~~~m 368 (403)
T 3ot5_A 335 GI--EAGTLKLIG--TNKENLIKEALDLLDN--KESHDKM 368 (403)
T ss_dssp HH--HHTSEEECC--SCHHHHHHHHHHHHHC--HHHHHHH
T ss_pred he--eCCcEEEcC--CCHHHHHHHHHHHHcC--HHHHHHH
Confidence 23 358777763 3899999999999987 6655443
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=2.9e-10 Score=112.36 Aligned_cols=354 Identities=14% Similarity=0.096 Sum_probs=175.2
Q ss_pred CCCcEEEEEcC-----------CCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecC
Q 012587 4 QDHVHVAILPL-----------PAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLT 72 (460)
Q Consensus 4 ~~~~~il~~~~-----------~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (460)
.+||||++++. ...|+-.....|+++|.++||+|++++........... .. ..++.+..++
T Consensus 18 ~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~-----~~---~~~v~v~~~~ 89 (438)
T 3c48_A 18 GSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIV-----RV---AENLRVINIA 89 (438)
T ss_dssp -CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEE-----EE---ETTEEEEEEC
T ss_pred cchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcccc-----cc---cCCeEEEEec
Confidence 57899999995 23578888999999999999999999964321110000 00 2346666665
Q ss_pred CCCCCCCCCCCCChHHHHHHHHhhCcHHHHHH-HHcCCCCccEEEEcCCcc--hHHHHHHHhCCceEEEecchhHHHHHH
Q 012587 73 DGLPRDHPRTPDKFPELVDSLNCATPPLLKEM-VSDSKSPVNCIITDGYMS--RAIDAAREVGVSIIYFRTISACAFWSF 149 (460)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~pD~vv~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~ 149 (460)
....... ........+..+. ..+... ++.. .+||+|++..... .+..++..+|+|+|...........
T Consensus 90 ~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~~~~-~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~-- 160 (438)
T 3c48_A 90 AGPYEGL--SKEELPTQLAAFT----GGMLSFTRREK-VTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVKN-- 160 (438)
T ss_dssp CSCSSSC--CGGGGGGGHHHHH----HHHHHHHHHHT-CCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHHHHS--
T ss_pred CCCcccc--chhHHHHHHHHHH----HHHHHHHHhcc-CCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCccccc--
Confidence 3211110 0111111122111 112222 4433 2499999875322 3456778899999886554321100
Q ss_pred hhccccccCCCCCCCCCccCCCCCCcccCCCCC-ChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCC-Ccee
Q 012587 150 HCIPDIIDAGELPIKGFLRCRDLPSFCRVNDPM-DPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSC-PNIY 227 (460)
Q Consensus 150 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~-~~~~ 227 (460)
..... .... ........+ .....++.+++.+....+.- ..... .. .++.
T Consensus 161 ~~~~~------------------------~~~~~~~~~~~~~~--~~~~~~d~ii~~s~~~~~~~-~~~~g--~~~~k~~ 211 (438)
T 3c48_A 161 SYRDD------------------------SDTPESEARRICEQ--QLVDNADVLAVNTQEEMQDL-MHHYD--ADPDRIS 211 (438)
T ss_dssp CC----------------------------CCHHHHHHHHHHH--HHHHHCSEEEESSHHHHHHH-HHHHC--CCGGGEE
T ss_pred ccccc------------------------cCCcchHHHHHHHH--HHHhcCCEEEEcCHHHHHHH-HHHhC--CChhheE
Confidence 00000 0000 000111111 22356778888885432211 01000 11 2355
Q ss_pred EeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCccc-CCHHHHHHHHHHHhhC----CCcEEEE
Q 012587 228 SIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAV-MSRDQLIEFYYGLVHS----KKSFLWV 302 (460)
Q Consensus 228 ~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~-~~~~~~~~~~~al~~~----~~~~i~~ 302 (460)
.+............+. .....+.+-+.. ++...+++..|+... ...+.+...+..+.+. +.++++
T Consensus 212 vi~ngvd~~~~~~~~~--------~~~~~~r~~~~~-~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~~~~~l~i- 281 (438)
T 3c48_A 212 VVSPGADVELYSPGND--------RATERSRRELGI-PLHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRVII- 281 (438)
T ss_dssp ECCCCCCTTTSCCC------------CHHHHHHTTC-CSSSEEEEEESCBSGGGCHHHHHHHHHHHHHHCTTCSEEEEE-
T ss_pred EecCCccccccCCccc--------chhhhhHHhcCC-CCCCcEEEEEeeecccCCHHHHHHHHHHHHhhCCCcceEEEE-
Confidence 5543332111100000 000112222221 233456677788753 2334333333333322 234433
Q ss_pred EccCCCCCCCCCCCCchHHH---HH--hcCCceeeeecCh---Hhhhccccccccccc----CChhHHHHHHHhCCceec
Q 012587 303 IRPDLISGKDGENQIPEELL---EA--TKERGCIAGWVPQ---EEVLAHSAVGGFLTH----CGWNSTLESIVAGMPMIC 370 (460)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~---~~--~~~n~~~~~~vp~---~~il~~~~~~~~I~H----GG~gs~~eal~~GvP~l~ 370 (460)
++..... | ...+.+. ++ ..+|+.+.+++|+ ..++..+++ +|.- |...++.||+++|+|+|+
T Consensus 282 ~G~~~~~--g---~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~ 354 (438)
T 3c48_A 282 CGGPSGP--N---ATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQASGTPVIA 354 (438)
T ss_dssp ECCBC-----------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHHTTCCEEE
T ss_pred EeCCCCC--C---cHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHHcCCCEEe
Confidence 3320000 0 1112222 11 2468999999986 567788887 5543 335689999999999998
Q ss_pred ccccccchhhHHHHHhhhceeeeecCCcchHHHHHHHHHHHhHhHHHH----HHHHHHHHHH
Q 012587 371 WPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVERKEEF----MESADRMANL 428 (460)
Q Consensus 371 ~P~~~DQ~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~~~~~~~----~~~a~~l~~~ 428 (460)
.+. ......+ +..+.|..+ ...+.+++.++|.++++| ++. .+++++..+.
T Consensus 355 ~~~----~~~~e~i-~~~~~g~~~-~~~d~~~la~~i~~l~~~--~~~~~~~~~~~~~~~~~ 408 (438)
T 3c48_A 355 ARV----GGLPIAV-AEGETGLLV-DGHSPHAWADALATLLDD--DETRIRMGEDAVEHART 408 (438)
T ss_dssp ESC----TTHHHHS-CBTTTEEEE-SSCCHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHH
T ss_pred cCC----CChhHHh-hCCCcEEEC-CCCCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHHh
Confidence 753 3344455 344567777 445899999999999986 543 3444444444
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=9.2e-10 Score=108.50 Aligned_cols=357 Identities=11% Similarity=0.015 Sum_probs=170.6
Q ss_pred CCcEEEEEcCC-----CCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHh---------hccc--cccccccCCCCceE
Q 012587 5 DHVHVAILPLP-----AVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVI---------RHSS--DAFSRYMQIPGFQF 68 (460)
Q Consensus 5 ~~~~il~~~~~-----~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~---------~~~~--~~~~~~~~~~~~~~ 68 (460)
++|||++++.. ..|--.-...|+++|+++||+|+++++......-. +... ..... ..++.+
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~gv~v 77 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEE---RGNLRI 77 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEE---ETTEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeecc---CCCceE
Confidence 46899999842 34555568899999999999999999532211000 0000 00000 235666
Q ss_pred EecCCCCCCCCCCCCCChHHH-HHHHHhhCcHHHHHHHHcC---CCCccEEEEcCCcc--hHHHHHHHhCCceEEEecch
Q 012587 69 KTLTDGLPRDHPRTPDKFPEL-VDSLNCATPPLLKEMVSDS---KSPVNCIITDGYMS--RAIDAAREVGVSIIYFRTIS 142 (460)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~---~~~pD~vv~D~~~~--~~~~~A~~lgiP~v~~~~~~ 142 (460)
..++...-... ......... ...+.. ....+..+++.. ..+||+|.+..... .+..++...|+|+|......
T Consensus 78 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~h~~ 155 (439)
T 3fro_A 78 YRIGGGLLDSE-DVYGPGWDGLIRKAVT-FGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYFKIPAVFTIHRL 155 (439)
T ss_dssp EEEESGGGGCS-STTCSHHHHHHHHHHH-HHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHHHCCCEEEEESCC
T ss_pred EEecchhcccc-ccccCCcchhhhhhHH-HHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhccCCCEEEEeccc
Confidence 66654111100 011111111 111111 112223333322 24999999875443 35667788999998876643
Q ss_pred hHHHHHHhhccccccCCCCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcC
Q 012587 143 ACAFWSFHCIPDIIDAGELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHS 222 (460)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~ 222 (460)
... .++... .....+... .. .......... ...++.++..+....+. ......- .
T Consensus 156 ~~~-----~~~~~~----------~~~~~~~~~-~~-~~~~~~~~~~------~~~ad~ii~~S~~~~~~-~~~~~~~-~ 210 (439)
T 3fro_A 156 NKS-----KLPAFY----------FHEAGLSEL-AP-YPDIDPEHTG------GYIADIVTTVSRGYLID-EWGFFRN-F 210 (439)
T ss_dssp CCC-----CEEHHH----------HHHTTCGGG-CC-SSEECHHHHH------HHHCSEEEESCHHHHHH-THHHHGG-G
T ss_pred ccc-----cCchHH----------hCccccccc-cc-cceeeHhhhh------hhhccEEEecCHHHHHH-Hhhhhhh-c
Confidence 210 000000 000000000 00 0000111111 24577777777543322 1111111 1
Q ss_pred CCceeEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcc--cCCHHHHHHHHHHHhh----CC
Q 012587 223 CPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIA--VMSRDQLIEFYYGLVH----SK 296 (460)
Q Consensus 223 ~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~--~~~~~~~~~~~~al~~----~~ 296 (460)
..++..+..-.......+ .... .........+.+-+.. +++ .+++..|+.. ....+.+-..+..+.. .+
T Consensus 211 ~~~i~vi~ngvd~~~~~~-~~~~--~~~~~~~~~~~~~~~~-~~~-~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~ 285 (439)
T 3fro_A 211 EGKITYVFNGIDCSFWNE-SYLT--GSRDERKKSLLSKFGM-DEG-VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQE 285 (439)
T ss_dssp TTSEEECCCCCCTTTSCG-GGSC--SCHHHHHHHHHHHHTC-CSC-EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGG
T ss_pred CCceeecCCCCCchhcCc-cccc--chhhhhHHHHHHHcCC-CCC-cEEEEEcccccccccHHHHHHHHHHHHhcccCCC
Confidence 234444433221111000 0000 0000012223333332 234 6778888876 3345555555555544 23
Q ss_pred CcEEEEEccCCCCCCCCCCCCchHHH---HHhcCCceeeeecChH---hhhcccccccccc----cCChhHHHHHHHhCC
Q 012587 297 KSFLWVIRPDLISGKDGENQIPEELL---EATKERGCIAGWVPQE---EVLAHSAVGGFLT----HCGWNSTLESIVAGM 366 (460)
Q Consensus 297 ~~~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~n~~~~~~vp~~---~il~~~~~~~~I~----HGG~gs~~eal~~Gv 366 (460)
.+++++ +. |.. .....+. ++.++++.+.+|+++. .++..+++ +|. -|-..++.||+++|+
T Consensus 286 ~~l~i~-G~------g~~-~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~ 355 (439)
T 3fro_A 286 MRFIII-GK------GDP-ELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGA 355 (439)
T ss_dssp EEEEEE-CC------CCH-HHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSE--EEECBSCCSSCHHHHHHHHTTC
T ss_pred eEEEEE-cC------CCh-hHHHHHHHHHhhcCCEEEEcCCCCHHHHHHHHHHCCE--EEeCCCCCCccHHHHHHHHCCC
Confidence 444443 21 110 0011121 2234444456889975 46788887 552 233479999999999
Q ss_pred ceecccccccchhhHHHHHhhhceeeeecCCcchHHHHHHHHHHHh-H
Q 012587 367 PMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMV-E 413 (460)
Q Consensus 367 P~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~-~ 413 (460)
|+|+... ......+ +. |.|..+ ...+.+++.++|.++++ +
T Consensus 356 Pvi~s~~----~~~~e~~-~~-~~g~~~-~~~d~~~la~~i~~ll~~~ 396 (439)
T 3fro_A 356 IPIASAV----GGLRDII-TN-ETGILV-KAGDPGELANAILKALELS 396 (439)
T ss_dssp EEEEESS----THHHHHC-CT-TTCEEE-CTTCHHHHHHHHHHHHHHT
T ss_pred CeEEcCC----CCcceeE-Ec-CceEEe-CCCCHHHHHHHHHHHHhcC
Confidence 9998643 3344444 33 678777 45689999999999998 5
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=1.6e-11 Score=119.19 Aligned_cols=327 Identities=13% Similarity=0.056 Sum_probs=168.2
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCC-eEEEEeCccch---hHHhhccccccccccCCCCceE-EecCCCCCCCCCC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGI-KITFLNTEHYY---DRVIRHSSDAFSRYMQIPGFQF-KTLTDGLPRDHPR 81 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH-~Vt~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 81 (460)
|||++++. +.++......|+++|+++|+ ++.++.+.... ....+..+ +.+ ..++- ..
T Consensus 1 mkIl~v~~-~~~~~~~~~~l~~~L~~~g~~~~~v~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~--~~---- 62 (384)
T 1vgv_A 1 MKVLTVFG-TRPEAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKLFS-----------IVPDYDLNI--MQ---- 62 (384)
T ss_dssp CEEEEEEC-SHHHHHHHHHHHHHHHHSTTCEEEEEECCSSGGGGHHHHHHHT-----------CCCSEECCC--CS----
T ss_pred CeEEEEec-ccHHHHHHHHHHHHHHhCCCCceEEEEcCCCHHHHHHHHHHcC-----------CCCCcceec--CC----
Confidence 68998764 45667778899999999995 87765542221 22222111 222 22221 00
Q ss_pred CCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCC---cchHHHHHHHhCCceEEEecchhHHHHHHhhccccccC
Q 012587 82 TPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGY---MSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDA 158 (460)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~---~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 158 (460)
........... ....+..++++. +||+|++... .+.+..+|..+|+|+|.+..... . ..
T Consensus 63 ~~~~~~~~~~~----~~~~l~~~l~~~--~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~-------~-~~---- 124 (384)
T 1vgv_A 63 PGQGLTEITCR----ILEGLKPILAEF--KPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLR-------T-GD---- 124 (384)
T ss_dssp TTSCHHHHHHH----HHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCC-------C-SC----
T ss_pred CCccHHHHHHH----HHHHHHHHHHHh--CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEecccc-------c-cc----
Confidence 11222221111 224567778887 9999997532 22456778899999987543210 0 00
Q ss_pred CCCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCC--CceeEeCcccccc
Q 012587 159 GELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSC--PNIYSIGPLNAHL 236 (460)
Q Consensus 159 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~--~~~~~vG~~~~~~ 236 (460)
. ...+.....+.. ....++.++..+...-+ ....... .++..+|......
T Consensus 125 ---------------~-------~~~~~~~~~~~~-~~~~~d~ii~~s~~~~~-----~l~~~g~~~~~i~vi~n~~~d~ 176 (384)
T 1vgv_A 125 ---------------L-------YSPWPEEANRTL-TGHLAMYHFSPTETSRQ-----NLLRENVADSRIFITGNTVIDA 176 (384)
T ss_dssp ---------------T-------TSSTTHHHHHHH-HHTTCSEEEESSHHHHH-----HHHHTTCCGGGEEECCCHHHHH
T ss_pred ---------------c-------cCCCchHhhHHH-HHhhccEEEcCcHHHHH-----HHHHcCCChhhEEEeCChHHHH
Confidence 0 000001111111 01346777777643221 1111011 2466666432111
Q ss_pred ccCCCccccCCCCccccchhhhhhhh-cCCCCcEEEEEecCcccCCHHHHHHHHHHHhhC-----CCcEEEEEccCCCCC
Q 012587 237 KVRIPEKTYSSSSLWKIDRSCMAWLD-KQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHS-----KKSFLWVIRPDLISG 310 (460)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~l~~~l~-~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~ 310 (460)
....++. .........++.+.+. ..+++++|+++.|+...... .+..++++++.+ +.++++..+.+
T Consensus 177 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~~~k-g~~~li~a~~~l~~~~~~~~l~i~~g~~---- 248 (384)
T 1vgv_A 177 LLWVRDQ---VMSSDKLRSELAANYPFIDPDKKMILVTGHRRESFGR-GFEEICHALADIATTHQDIQIVYPVHLN---- 248 (384)
T ss_dssp HHHHHHH---TTTCHHHHHHHHTTCTTCCTTSEEEEEECCCBSSCCH-HHHHHHHHHHHHHHHCTTEEEEEECCBC----
T ss_pred HHhhhhc---cccchhhhHHHHHhccccCCCCCEEEEEeCCccccch-HHHHHHHHHHHHHhhCCCeEEEEEcCCC----
Confidence 0000000 0000000011222221 11346778888887654322 234444444432 34555533210
Q ss_pred CCCCCCCchHHHHHh--cCCceeeeecCh---HhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHHHHH
Q 012587 311 KDGENQIPEELLEAT--KERGCIAGWVPQ---EEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVG 385 (460)
Q Consensus 311 ~~~~~~~~~~~~~~~--~~n~~~~~~vp~---~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~ 385 (460)
......+.+.. .+|+.+.+++++ ..+++.+++ +|+.+| +++.||+++|+|+|+.+..++..+ +.
T Consensus 249 ----~~~~~~l~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~~e----~v 317 (384)
T 1vgv_A 249 ----PNVREPVNRILGHVKNVILIDPQEYLPFVWLMNHAWL--ILTDSG-GIQEEAPSLGKPVLVMRDTTERPE----AV 317 (384)
T ss_dssp ----HHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHCSE--EEESSS-TGGGTGGGGTCCEEEESSCCSCHH----HH
T ss_pred ----HHHHHHHHHHhhcCCCEEEeCCCCHHHHHHHHHhCcE--EEECCc-chHHHHHHcCCCEEEccCCCCcch----hh
Confidence 00112222211 258888777764 677889998 888875 348899999999999987444332 33
Q ss_pred hhhceeeeecCCcchHHHHHHHHHHHhHhHHHHHHH
Q 012587 386 EVWKLGLDIKDLCDRNIVEKAVNDLMVERKEEFMES 421 (460)
Q Consensus 386 e~~G~g~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~ 421 (460)
+ .|.|..++. +.++|.+++.++++| ++.+++
T Consensus 318 ~-~g~g~lv~~--d~~~la~~i~~ll~d--~~~~~~ 348 (384)
T 1vgv_A 318 T-AGTVRLVGT--DKQRIVEEVTRLLKD--ENEYQA 348 (384)
T ss_dssp H-HTSEEEECS--SHHHHHHHHHHHHHC--HHHHHH
T ss_pred h-CCceEEeCC--CHHHHHHHHHHHHhC--hHHHhh
Confidence 3 488888843 899999999999987 654443
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=3.9e-10 Score=110.04 Aligned_cols=316 Identities=14% Similarity=0.083 Sum_probs=163.7
Q ss_pred CCCCcEEEEEcCC---C-CCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCC
Q 012587 3 KQDHVHVAILPLP---A-VGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRD 78 (460)
Q Consensus 3 ~~~~~~il~~~~~---~-~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (460)
..+||||++++.. . .|.-.-...++++|.++||+|++++.......+.+... ..+ .+..++..
T Consensus 17 ~~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~--------~~~-~~~~~~~~---- 83 (406)
T 2gek_A 17 RGSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVV--------SGG-KAVPIPYN---- 83 (406)
T ss_dssp ----CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEE--------ECC-CCC---------
T ss_pred CCCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCcccc--------cCC-cEEecccc----
Confidence 3568999999852 2 45567889999999999999999997443211110000 000 11111100
Q ss_pred CCCCCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcc--hHHHHHHHhCCceEEEecchhHHHHHHhhccccc
Q 012587 79 HPRTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS--RAIDAAREVGVSIIYFRTISACAFWSFHCIPDII 156 (460)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 156 (460)
....... +.......+.+++++. +||+|++..... .+..++...|+|+|...........
T Consensus 84 -----~~~~~~~--~~~~~~~~l~~~l~~~--~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~--------- 145 (406)
T 2gek_A 84 -----GSVARLR--FGPATHRKVKKWIAEG--DFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTSTTKSL--------- 145 (406)
T ss_dssp --------------CCHHHHHHHHHHHHHH--CCSEEEEECCCSSSHHHHHHHHEESSEEEEECCCCCSHH---------
T ss_pred -----CCccccc--ccHHHHHHHHHHHHhc--CCCEEEECCccchHHHHHHHHhcCCCEEEEEcCcchhhh---------
Confidence 0000000 0000123456667765 999999776544 3566677789999886554211000
Q ss_pred cCCCCCCCCCccCCCCCCcccCCCCCChHHHHHHHHh-hhhcCCCEEEEcChhhhchhHHHHHhhcCC-CceeEeCcccc
Q 012587 157 DAGELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARET-RLSAHADGLILNTFEDLEGPILSQIRNHSC-PNIYSIGPLNA 234 (460)
Q Consensus 157 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~le~p~~~~~~~~~~-~~~~~vG~~~~ 234 (460)
......+.. .....++.+++.+....+. ...... .++ .+.....
T Consensus 146 ----------------------------~~~~~~~~~~~~~~~~d~ii~~s~~~~~~-----~~~~~~~~~~-vi~~~v~ 191 (406)
T 2gek_A 146 ----------------------------TLSVFQGILRPYHEKIIGRIAVSDLARRW-----QMEALGSDAV-EIPNGVD 191 (406)
T ss_dssp ----------------------------HHHHHHSTTHHHHTTCSEEEESSHHHHHH-----HHHHHSSCEE-ECCCCBC
T ss_pred ----------------------------hHHHHHHHHHHHHhhCCEEEECCHHHHHH-----HHHhcCCCcE-EecCCCC
Confidence 000000000 2235677777777543221 111011 233 3333221
Q ss_pred ccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCc-c-cCCHHHHHHHHHHHhhC--CCcEEEEEccCCCCC
Q 012587 235 HLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSI-A-VMSRDQLIEFYYGLVHS--KKSFLWVIRPDLISG 310 (460)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~-~-~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~ 310 (460)
..... .... - .. ......+++..|+. . ....+.+...+..+.+. +.+++++ +.
T Consensus 192 ~~~~~------------~~~~-~---~~-~~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~-G~----- 248 (406)
T 2gek_A 192 VASFA------------DAPL-L---DG-YPREGRTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILIV-GR----- 248 (406)
T ss_dssp HHHHH------------TCCC-C---TT-CSCSSCEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEEEE-SC-----
T ss_pred hhhcC------------CCch-h---hh-ccCCCeEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEEEE-cC-----
Confidence 11000 0000 0 00 00112466777877 4 23344443344444332 4454443 21
Q ss_pred CCCCCCCchHHHHH---hcCCceeeeecCh---Hhhhcccccccccc----cCCh-hHHHHHHHhCCceecccccccchh
Q 012587 311 KDGENQIPEELLEA---TKERGCIAGWVPQ---EEVLAHSAVGGFLT----HCGW-NSTLESIVAGMPMICWPSFADQQI 379 (460)
Q Consensus 311 ~~~~~~~~~~~~~~---~~~n~~~~~~vp~---~~il~~~~~~~~I~----HGG~-gs~~eal~~GvP~l~~P~~~DQ~~ 379 (460)
+ .. +.+.+. ..+|+.+.+++++ ..++..+++ +|. +.|. .++.||+++|+|+|+.+. ..
T Consensus 249 -~---~~-~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~ 317 (406)
T 2gek_A 249 -G---DE-DELREQAGDLAGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL----DA 317 (406)
T ss_dssp -S---CH-HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC----HH
T ss_pred -C---cH-HHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC----Cc
Confidence 1 11 233321 2468888999997 578889998 552 3444 589999999999998765 44
Q ss_pred hHHHHHhhhceeeeecCCcchHHHHHHHHHHHhHhHHHHHHH
Q 012587 380 NSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVERKEEFMES 421 (460)
Q Consensus 380 na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~ 421 (460)
....+ +..+.|..+ ..-+.+++.++|.++++| +..+++
T Consensus 318 ~~e~i-~~~~~g~~~-~~~d~~~l~~~i~~l~~~--~~~~~~ 355 (406)
T 2gek_A 318 FRRVL-ADGDAGRLV-PVDDADGMAAALIGILED--DQLRAG 355 (406)
T ss_dssp HHHHH-TTTTSSEEC-CTTCHHHHHHHHHHHHHC--HHHHHH
T ss_pred HHHHh-cCCCceEEe-CCCCHHHHHHHHHHHHcC--HHHHHH
Confidence 55556 444567766 445889999999999987 554443
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.32 E-value=7.9e-11 Score=113.84 Aligned_cols=324 Identities=12% Similarity=0.056 Sum_probs=166.6
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhC-C-CeEEEEeCccchhHHhhccccccccccCCCCceE-EecCCCCCCCCC
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHA-G-IKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQF-KTLTDGLPRDHP 80 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~r-G-H~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 80 (460)
+++|||++++ ++.++......++++|+++ | |+|.+++++...+...+... ..++.. ..++-.. +
T Consensus 6 ~~~mkIl~v~-~~~~~~~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~-~--- 72 (375)
T 3beo_A 6 TERLKVMTIF-GTRPEAIKMAPLVLELQKHPEKIESIVTVTAQHRQMLDQVLS--------IFGITPDFDLNIMK-D--- 72 (375)
T ss_dssp SSCEEEEEEE-CSHHHHHHHHHHHHHHTTCTTTEEEEEEECCSSSHHHHHHHH--------HHTCCCSEECCCCC-T---
T ss_pred CcCceEEEEe-cCcHHHHHHHHHHHHHHhCCCCCCeEEEEcCCCHHHHHHHHH--------HcCCCCccccccCC-C---
Confidence 4458999997 4467777888999999987 5 88887776443332221100 001211 1111100 0
Q ss_pred CCCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcc---hHHHHHHHhCCceEEEecchhHHHHHHhhcccccc
Q 012587 81 RTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS---RAIDAAREVGVSIIYFRTISACAFWSFHCIPDIID 157 (460)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~---~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~ 157 (460)
..+....... ....+..++++. +||+|++..... .+..+|...|+|+|.+.... .. ..
T Consensus 73 --~~~~~~~~~~----~~~~l~~~l~~~--~pDvv~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~-------~~-~~--- 133 (375)
T 3beo_A 73 --RQTLIDITTR----GLEGLDKVMKEA--KPDIVLVHGDTTTTFIASLAAFYNQIPVGHVEAGL-------RT-WD--- 133 (375)
T ss_dssp --TCCHHHHHHH----HHHHHHHHHHHH--CCSEEEEETTSHHHHHHHHHHHHTTCCEEEESCCC-------CC-SC---
T ss_pred --cccHHHHHHH----HHHHHHHHHHHh--CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEeccc-------cc-cc---
Confidence 1122111111 223456777776 999999854322 34567889999998643211 00 00
Q ss_pred CCCCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCC--CceeEeCcc-cc
Q 012587 158 AGELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSC--PNIYSIGPL-NA 234 (460)
Q Consensus 158 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~--~~~~~vG~~-~~ 234 (460)
.+ . .......+. ... ..++.++..+...-+ ....... .++..+|.. ..
T Consensus 134 ----------------~~-~--~~~~~~~~~---~~~--~~~d~ii~~s~~~~~-----~~~~~g~~~~~i~vi~n~~~d 184 (375)
T 3beo_A 134 ----------------KY-S--PYPEEMNRQ---LTG--VMADLHFSPTAKSAT-----NLQKENKDESRIFITGNTAID 184 (375)
T ss_dssp ----------------TT-S--STTHHHHHH---HHH--HHCSEEEESSHHHHH-----HHHHTTCCGGGEEECCCHHHH
T ss_pred ----------------cc-C--CChhHhhhh---HHh--hhhheeeCCCHHHHH-----HHHHcCCCcccEEEECChhHh
Confidence 00 0 000011111 111 236677776643221 1111011 246666643 21
Q ss_pred ccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhC-----CCcEEEEEccCCCC
Q 012587 235 HLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHS-----KKSFLWVIRPDLIS 309 (460)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~ 309 (460)
........ ....++.+-+ +++++|+++.|....... .+..++++++.+ +.++++ +.
T Consensus 185 ~~~~~~~~---------~~~~~~~~~~---~~~~~vl~~~gr~~~~~K-~~~~li~a~~~l~~~~~~~~~i~--~~---- 245 (375)
T 3beo_A 185 ALKTTVKE---------TYSHPVLEKL---GNNRLVLMTAHRRENLGE-PMRNMFRAIKRLVDKHEDVQVVY--PV---- 245 (375)
T ss_dssp HHHHHCCS---------SCCCHHHHTT---TTSEEEEEECCCGGGTTH-HHHHHHHHHHHHHHHCTTEEEEE--EC----
T ss_pred hhhhhhhh---------hhhHHHHHhc---cCCCeEEEEecccccchh-HHHHHHHHHHHHHhhCCCeEEEE--eC----
Confidence 11000000 0011121111 245677788887653322 234455555432 344433 21
Q ss_pred CCCCCCCCchHHHHHhc--CCceeeeecCh---HhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHHHH
Q 012587 310 GKDGENQIPEELLEATK--ERGCIAGWVPQ---EEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFV 384 (460)
Q Consensus 310 ~~~~~~~~~~~~~~~~~--~n~~~~~~vp~---~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~ 384 (460)
+....+...+.+... +|+.+.+++++ ..++..+++ +|+.. .+.+.||+++|+|+|+....+... ..+
T Consensus 246 --g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~~s-g~~~lEA~a~G~Pvi~~~~~~~~~---e~v 317 (375)
T 3beo_A 246 --HMNPVVRETANDILGDYGRIHLIEPLDVIDFHNVAARSYL--MLTDS-GGVQEEAPSLGVPVLVLRDTTERP---EGI 317 (375)
T ss_dssp --CSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTCSE--EEECC-HHHHHHHHHHTCCEEECSSCCSCH---HHH
T ss_pred --CCCHHHHHHHHHHhhccCCEEEeCCCCHHHHHHHHHhCcE--EEECC-CChHHHHHhcCCCEEEecCCCCCc---eee
Confidence 111011122222222 68888777775 567888887 88776 355889999999999885433332 234
Q ss_pred HhhhceeeeecCCcchHHHHHHHHHHHhHhHHHHHHH
Q 012587 385 GEVWKLGLDIKDLCDRNIVEKAVNDLMVERKEEFMES 421 (460)
Q Consensus 385 ~e~~G~g~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~ 421 (460)
+ .|.|..++ . +.++|.+++.++++| ++.+++
T Consensus 318 -~-~g~g~~v~-~-d~~~la~~i~~ll~~--~~~~~~ 348 (375)
T 3beo_A 318 -E-AGTLKLAG-T-DEETIFSLADELLSD--KEAHDK 348 (375)
T ss_dssp -H-TTSEEECC-S-CHHHHHHHHHHHHHC--HHHHHH
T ss_pred -c-CCceEEcC-C-CHHHHHHHHHHHHhC--hHhHhh
Confidence 3 47887774 3 899999999999997 655443
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=9.2e-09 Score=103.41 Aligned_cols=85 Identities=15% Similarity=0.116 Sum_probs=61.3
Q ss_pred cCCceeeeecCh---Hhhhccc----ccccccc---c-CChhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeee
Q 012587 326 KERGCIAGWVPQ---EEVLAHS----AVGGFLT---H-CGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDI 394 (460)
Q Consensus 326 ~~n~~~~~~vp~---~~il~~~----~~~~~I~---H-GG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~ 394 (460)
.+++.+.+++|+ ..++..+ ++ +|. + |-..++.||+++|+|+|+... ......+ +....|..+
T Consensus 334 ~~~V~~~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v-~~~~~g~l~ 406 (499)
T 2r60_A 334 RGKVSMFPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEIL-DGGKYGVLV 406 (499)
T ss_dssp BTTEEEEECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHT-GGGTSSEEE
T ss_pred CceEEECCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHh-cCCceEEEe
Confidence 468999999986 4567788 87 552 2 334689999999999998753 2344445 343467777
Q ss_pred cCCcchHHHHHHHHHHHhHhHHHHHH
Q 012587 395 KDLCDRNIVEKAVNDLMVERKEEFME 420 (460)
Q Consensus 395 ~~~~~~~~l~~~i~~~l~~~~~~~~~ 420 (460)
..-+.+++.++|.++++| +..++
T Consensus 407 -~~~d~~~la~~i~~ll~~--~~~~~ 429 (499)
T 2r60_A 407 -DPEDPEDIARGLLKAFES--EETWS 429 (499)
T ss_dssp -CTTCHHHHHHHHHHHHSC--HHHHH
T ss_pred -CCCCHHHHHHHHHHHHhC--HHHHH
Confidence 446889999999999997 55443
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=6.6e-10 Score=105.95 Aligned_cols=125 Identities=15% Similarity=0.113 Sum_probs=80.1
Q ss_pred EEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChH---hhhccccc
Q 012587 270 IYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQE---EVLAHSAV 346 (460)
Q Consensus 270 V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~---~il~~~~~ 346 (460)
+++..|+... ...+..++++++.++.+++++- . |.....-..+.++.++|+.+.+|+++. .++..+++
T Consensus 164 ~i~~vG~~~~--~Kg~~~li~a~~~~~~~l~i~G-~------g~~~~~l~~~~~~~~~~v~~~g~~~~~~l~~~~~~adv 234 (342)
T 2iuy_A 164 FLLFMGRVSP--HKGALEAAAFAHACGRRLVLAG-P------AWEPEYFDEITRRYGSTVEPIGEVGGERRLDLLASAHA 234 (342)
T ss_dssp CEEEESCCCG--GGTHHHHHHHHHHHTCCEEEES-C------CCCHHHHHHHHHHHTTTEEECCCCCHHHHHHHHHHCSE
T ss_pred EEEEEecccc--ccCHHHHHHHHHhcCcEEEEEe-C------cccHHHHHHHHHHhCCCEEEeccCCHHHHHHHHHhCCE
Confidence 4455677652 2234556666666677766543 2 110001111223344799999999975 78889998
Q ss_pred cccc--cc-----------CC-hhHHHHHHHhCCceecccccccchhhHHHHHhh--hceeeeecCCcchHHHHHHHHHH
Q 012587 347 GGFL--TH-----------CG-WNSTLESIVAGMPMICWPSFADQQINSRFVGEV--WKLGLDIKDLCDRNIVEKAVNDL 410 (460)
Q Consensus 347 ~~~I--~H-----------GG-~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~--~G~g~~~~~~~~~~~l~~~i~~~ 410 (460)
+| +. -| ..++.||+++|+|+|+.... .+...+ +. -+.|..+ .. +.+++.++|.++
T Consensus 235 --~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~----~~~e~~-~~~~~~~g~~~-~~-d~~~l~~~i~~l 305 (342)
T 2iuy_A 235 --VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNG----CLAEIV-PSVGEVVGYGT-DF-APDEARRTLAGL 305 (342)
T ss_dssp --EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTT----THHHHG-GGGEEECCSSS-CC-CHHHHHHHHHTS
T ss_pred --EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCC----ChHHHh-cccCCCceEEc-CC-CHHHHHHHHHHH
Confidence 55 22 33 46899999999999998752 344455 34 3466666 45 999999999999
Q ss_pred Hh
Q 012587 411 MV 412 (460)
Q Consensus 411 l~ 412 (460)
++
T Consensus 306 ~~ 307 (342)
T 2iuy_A 306 PA 307 (342)
T ss_dssp CC
T ss_pred HH
Confidence 86
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=99.17 E-value=4.6e-09 Score=101.20 Aligned_cols=140 Identities=15% Similarity=0.161 Sum_probs=89.8
Q ss_pred CCcEEEEEecCcccCCHHHHHHHHHHHhhCCC----cE-EEEEccCCCCCCCCCCCCchHHH---HH--hcCCceeeeec
Q 012587 266 KQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKK----SF-LWVIRPDLISGKDGENQIPEELL---EA--TKERGCIAGWV 335 (460)
Q Consensus 266 ~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~----~~-i~~~~~~~~~~~~~~~~~~~~~~---~~--~~~n~~~~~~v 335 (460)
+++.+++..|+.... ..+..++++++.+.. ++ ++.++. +. .+.+. ++ ..+|+.+.++.
T Consensus 194 ~~~~~i~~~G~~~~~--K~~~~li~a~~~l~~~~~~~~~l~i~G~------g~----~~~~~~~~~~~~~~~~v~~~g~~ 261 (374)
T 2iw1_A 194 EQQNLLLQVGSDFGR--KGVDRSIEALASLPESLRHNTLLFVVGQ------DK----PRKFEALAEKLGVRSNVHFFSGR 261 (374)
T ss_dssp TTCEEEEEECSCTTT--TTHHHHHHHHHTSCHHHHHTEEEEEESS------SC----CHHHHHHHHHHTCGGGEEEESCC
T ss_pred CCCeEEEEeccchhh--cCHHHHHHHHHHhHhccCCceEEEEEcC------CC----HHHHHHHHHHcCCCCcEEECCCc
Confidence 345666778876532 234445666665432 22 333432 11 12222 11 24688888876
Q ss_pred Ch-Hhhhcccccccccc----cCChhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecCCcchHHHHHHHHHH
Q 012587 336 PQ-EEVLAHSAVGGFLT----HCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDL 410 (460)
Q Consensus 336 p~-~~il~~~~~~~~I~----HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~ 410 (460)
.+ ..++..+++ +|. -|...++.||+++|+|+|+... ..+...+ +..+.|..+....+.+++.+++.++
T Consensus 262 ~~~~~~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i-~~~~~g~~~~~~~~~~~l~~~i~~l 334 (374)
T 2iw1_A 262 NDVSELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYI-ADANCGTVIAEPFSQEQLNEVLRKA 334 (374)
T ss_dssp SCHHHHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHH-HHHTCEEEECSSCCHHHHHHHHHHH
T ss_pred ccHHHHHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhh-ccCCceEEeCCCCCHHHHHHHHHHH
Confidence 54 778888997 664 4667899999999999999764 3455666 4567888884356899999999999
Q ss_pred HhHhHHHHHHHHHHHH
Q 012587 411 MVERKEEFMESADRMA 426 (460)
Q Consensus 411 l~~~~~~~~~~a~~l~ 426 (460)
++| ++.+++..+-+
T Consensus 335 ~~~--~~~~~~~~~~~ 348 (374)
T 2iw1_A 335 LTQ--SPLRMAWAENA 348 (374)
T ss_dssp HHC--HHHHHHHHHHH
T ss_pred HcC--hHHHHHHHHHH
Confidence 987 65554443333
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=7.4e-08 Score=93.58 Aligned_cols=319 Identities=13% Similarity=0.099 Sum_probs=162.8
Q ss_pred cEEEEEcCCCC-CCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCCCCC
Q 012587 7 VHVAILPLPAV-GHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPDK 85 (460)
Q Consensus 7 ~~il~~~~~~~-Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (460)
.++....+|.. |.-.-...|+++|.++||+|++++...... .... ..++.+..++...... ....
T Consensus 16 ~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~-~~~~----------~~~i~~~~~~~~~~~~---~~~~ 81 (394)
T 2jjm_A 16 LKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFR-LNKV----------YPNIYFHEVTVNQYSV---FQYP 81 (394)
T ss_dssp CEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC-----CC----------CTTEEEECCCCC-------CCSC
T ss_pred eeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCc-cccc----------CCceEEEecccccccc---cccc
Confidence 47888888754 455667799999999999999999743211 1111 3346665554211000 0000
Q ss_pred hHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcc--hHHHHHH-Hh--CCceEEEecchhHHHHHHhhccccccCCC
Q 012587 86 FPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS--RAIDAAR-EV--GVSIIYFRTISACAFWSFHCIPDIIDAGE 160 (460)
Q Consensus 86 ~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~--~~~~~A~-~l--giP~v~~~~~~~~~~~~~~~~~~~~~~~~ 160 (460)
.. .+. ....+.+++++. +||+|++..... ....++. .+ ++|+|......... ....
T Consensus 82 ~~-~~~-----~~~~l~~~l~~~--~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~-----~~~~------ 142 (394)
T 2jjm_A 82 PY-DLA-----LASKMAEVAQRE--NLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDIT-----VLGS------ 142 (394)
T ss_dssp CH-HHH-----HHHHHHHHHHHH--TCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHH-----TTTT------
T ss_pred cc-cHH-----HHHHHHHHHHHc--CCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCccc-----ccCC------
Confidence 11 111 123456666666 999999874432 2233444 33 59988765442110 0000
Q ss_pred CCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCC---CceeEeCccccccc
Q 012587 161 LPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSC---PNIYSIGPLNAHLK 237 (460)
Q Consensus 161 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~---~~~~~vG~~~~~~~ 237 (460)
........+. ....++.++..+....+ .... .. .++..+........
T Consensus 143 ----------------------~~~~~~~~~~--~~~~ad~ii~~s~~~~~-----~~~~-~~~~~~~~~vi~ngv~~~~ 192 (394)
T 2jjm_A 143 ----------------------DPSLNNLIRF--GIEQSDVVTAVSHSLIN-----ETHE-LVKPNKDIQTVYNFIDERV 192 (394)
T ss_dssp ----------------------CTTTHHHHHH--HHHHSSEEEESCHHHHH-----HHHH-HTCCSSCEEECCCCCCTTT
T ss_pred ----------------------CHHHHHHHHH--HHhhCCEEEECCHHHHH-----HHHH-hhCCcccEEEecCCccHHh
Confidence 0000111111 12557778877754322 1122 11 24555543332111
Q ss_pred cCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCccc-CCHHHHHHHHHHHhh-CCCcEEEEEccCCCCCCCCCC
Q 012587 238 VRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAV-MSRDQLIEFYYGLVH-SKKSFLWVIRPDLISGKDGEN 315 (460)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~-~~~~~~~~~~~al~~-~~~~~i~~~~~~~~~~~~~~~ 315 (460)
... .....+.+-+. .+++..+++..|+... ...+.+-..+..+.+ .+.++++ ++. +
T Consensus 193 ~~~-----------~~~~~~~~~~~-~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~i-~G~------g--- 250 (394)
T 2jjm_A 193 YFK-----------RDMTQLKKEYG-ISESEKILIHISNFRKVKRVQDVVQAFAKIVTEVDAKLLL-VGD------G--- 250 (394)
T ss_dssp CCC-----------CCCHHHHHHTT-CC---CEEEEECCCCGGGTHHHHHHHHHHHHHSSCCEEEE-ECC------C---
T ss_pred cCC-----------cchHHHHHHcC-CCCCCeEEEEeeccccccCHHHHHHHHHHHHhhCCCEEEE-ECC------c---
Confidence 100 01112222222 1123445567787653 233333333333332 3455444 332 1
Q ss_pred CCchHHHHH-----hcCCceeeeecCh-Hhhhccccccccc----ccCChhHHHHHHHhCCceecccccccchhhHHHHH
Q 012587 316 QIPEELLEA-----TKERGCIAGWVPQ-EEVLAHSAVGGFL----THCGWNSTLESIVAGMPMICWPSFADQQINSRFVG 385 (460)
Q Consensus 316 ~~~~~~~~~-----~~~n~~~~~~vp~-~~il~~~~~~~~I----~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~ 385 (460)
...+.+.+. ..+|+.+.++..+ ..++..+++ +| .-|...++.||+++|+|+|+.+.. .....+
T Consensus 251 ~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~----~~~e~v- 323 (394)
T 2jjm_A 251 PEFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVG----GIPEVI- 323 (394)
T ss_dssp TTHHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCT----TSTTTC-
T ss_pred hHHHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCC----ChHHHh-
Confidence 111222221 1357888887653 788889998 66 456668999999999999987643 233334
Q ss_pred hhhceeeeecCCcchHHHHHHHHHHHhHhHHHHHH
Q 012587 386 EVWKLGLDIKDLCDRNIVEKAVNDLMVERKEEFME 420 (460)
Q Consensus 386 e~~G~g~~~~~~~~~~~l~~~i~~~l~~~~~~~~~ 420 (460)
+..+.|..+ ..-+.+++.++|.++++| ++.++
T Consensus 324 ~~~~~g~~~-~~~d~~~la~~i~~l~~~--~~~~~ 355 (394)
T 2jjm_A 324 QHGDTGYLC-EVGDTTGVADQAIQLLKD--EELHR 355 (394)
T ss_dssp CBTTTEEEE-CTTCHHHHHHHHHHHHHC--HHHHH
T ss_pred hcCCceEEe-CCCCHHHHHHHHHHHHcC--HHHHH
Confidence 333567766 445889999999999987 55443
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=99.11 E-value=2.2e-09 Score=103.78 Aligned_cols=317 Identities=11% Similarity=0.058 Sum_probs=169.8
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchh-HHhhccccccccccCCCCceEEecCCCCCCCCCCCC
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYD-RVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTP 83 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (460)
+|.|++++ .|++-.+.=+.+|.++|.++ .++.++.+...++ .+.+.. ..++.+. -|+ +.-+. ..
T Consensus 8 ~~~~~~~v-~GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~---------~~~~~i~-~~~-~~l~~--~~ 72 (385)
T 4hwg_A 8 HMLKVMTI-VGTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVF---------FDDMGIR-KPD-YFLEV--AA 72 (385)
T ss_dssp CCCEEEEE-ECSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHH---------HC-CCCC-CCS-EECCC--CC
T ss_pred hhhheeEE-EEcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHH---------HhhCCCC-CCc-eecCC--CC
Confidence 56777665 57777788888888888887 8988887766655 332211 0112210 111 00011 12
Q ss_pred CChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEE--cCCcchHHHHHHHhCCceEEEecchhHHHHHHhhccccccCCCC
Q 012587 84 DKFPELVDSLNCATPPLLKEMVSDSKSPVNCIIT--DGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGEL 161 (460)
Q Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~--D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (460)
.+....... ....+.+++++. +||+|+. |..+.++..+|.++|||++.+....
T Consensus 73 ~~~~~~~~~----~~~~l~~~l~~~--kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~eagl------------------- 127 (385)
T 4hwg_A 73 DNTAKSIGL----VIEKVDEVLEKE--KPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAGN------------------- 127 (385)
T ss_dssp CCSHHHHHH----HHHHHHHHHHHH--CCSEEEEESCSGGGGGHHHHHHTTCCEEEESCCC-------------------
T ss_pred CCHHHHHHH----HHHHHHHHHHhc--CCcEEEEECCchHHHHHHHHHHhCCCEEEEeCCC-------------------
Confidence 233333332 335678888887 9999886 3333345889999999977643220
Q ss_pred CCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCC--CceeEeCccccccccC
Q 012587 162 PIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSC--PNIYSIGPLNAHLKVR 239 (460)
Q Consensus 162 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~--~~~~~vG~~~~~~~~~ 239 (460)
+. ++. .......+.+. . .-++.++..+-.. .+.+..... .+++.+|-........
T Consensus 128 ------rs------~~~-~~pee~nR~~~---~--~~a~~~~~~te~~-----~~~l~~~G~~~~~I~vtGnp~~D~~~~ 184 (385)
T 4hwg_A 128 ------RC------FDQ-RVPEEINRKII---D--HISDVNITLTEHA-----RRYLIAEGLPAELTFKSGSHMPEVLDR 184 (385)
T ss_dssp ------CC------SCT-TSTHHHHHHHH---H--HHCSEEEESSHHH-----HHHHHHTTCCGGGEEECCCSHHHHHHH
T ss_pred ------cc------ccc-cCcHHHHHHHH---H--hhhceeecCCHHH-----HHHHHHcCCCcCcEEEECCchHHHHHH
Confidence 00 000 00001111111 1 2345555555321 111122022 3588888432211100
Q ss_pred CCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCH-HHHHHHHHHHhhC----CCcEEEEEccCCCCCCCCC
Q 012587 240 IPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSR-DQLIEFYYGLVHS----KKSFLWVIRPDLISGKDGE 314 (460)
Q Consensus 240 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~-~~~~~~~~al~~~----~~~~i~~~~~~~~~~~~~~ 314 (460)
..+. ...+++.+-+.. ++++.|+++.|...+.+. ..+..+++++..+ +..+|+...+
T Consensus 185 ~~~~--------~~~~~~~~~lgl-~~~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p--------- 246 (385)
T 4hwg_A 185 FMPK--------ILKSDILDKLSL-TPKQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHP--------- 246 (385)
T ss_dssp HHHH--------HHHCCHHHHTTC-CTTSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECH---------
T ss_pred hhhh--------cchhHHHHHcCC-CcCCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECCh---------
Confidence 0000 011223333332 235788898887643332 3455666666543 5667776521
Q ss_pred CCCchHHHHH---h--cCCceeeeecC---hHhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHHHHHh
Q 012587 315 NQIPEELLEA---T--KERGCIAGWVP---QEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGE 386 (460)
Q Consensus 315 ~~~~~~~~~~---~--~~n~~~~~~vp---~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e 386 (460)
.+...+.+. . .+|+.+.+.++ ...+++.+++ +|+-.|. .+.||.++|+|+|+++...+.++ .+
T Consensus 247 -~~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e---~v-- 317 (385)
T 4hwg_A 247 -RTKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE---GM-- 317 (385)
T ss_dssp -HHHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH---HH--
T ss_pred -HHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh---hh--
Confidence 111111111 1 24777766555 4578889997 8888775 46999999999999987554332 24
Q ss_pred hhceeeeecCCcchHHHHHHHHHHHhH
Q 012587 387 VWKLGLDIKDLCDRNIVEKAVNDLMVE 413 (460)
Q Consensus 387 ~~G~g~~~~~~~~~~~l~~~i~~~l~~ 413 (460)
+.|.++.+. .+.+.|.+++.++|+|
T Consensus 318 ~~G~~~lv~--~d~~~i~~ai~~ll~d 342 (385)
T 4hwg_A 318 DAGTLIMSG--FKAERVLQAVKTITEE 342 (385)
T ss_dssp HHTCCEECC--SSHHHHHHHHHHHHTT
T ss_pred hcCceEEcC--CCHHHHHHHHHHHHhC
Confidence 358776663 4899999999999986
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=1.2e-07 Score=92.77 Aligned_cols=84 Identities=15% Similarity=0.008 Sum_probs=61.4
Q ss_pred cCCceeeeecC------hHhhhcccccccccccC----ChhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeec
Q 012587 326 KERGCIAGWVP------QEEVLAHSAVGGFLTHC----GWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIK 395 (460)
Q Consensus 326 ~~n~~~~~~vp------~~~il~~~~~~~~I~HG----G~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~ 395 (460)
.+++.+.+|++ -..++..+++ +|.-. ...++.||+++|+|+|+.+. ..+...+ +..+.|..++
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i-~~~~~g~l~~ 364 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQI-VDGETGFLVR 364 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHC-CBTTTEEEES
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhhe-ecCCCeEEEC
Confidence 46888888775 2567788887 55433 45789999999999999764 3344555 3445777774
Q ss_pred CCcchHHHHHHHHHHHhHhHHHHHHH
Q 012587 396 DLCDRNIVEKAVNDLMVERKEEFMES 421 (460)
Q Consensus 396 ~~~~~~~l~~~i~~~l~~~~~~~~~~ 421 (460)
+.+++.++|.++++| +..+++
T Consensus 365 ---d~~~la~~i~~ll~~--~~~~~~ 385 (416)
T 2x6q_A 365 ---DANEAVEVVLYLLKH--PEVSKE 385 (416)
T ss_dssp ---SHHHHHHHHHHHHHC--HHHHHH
T ss_pred ---CHHHHHHHHHHHHhC--HHHHHH
Confidence 899999999999987 655443
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=98.72 E-value=4.7e-06 Score=83.15 Aligned_cols=133 Identities=10% Similarity=0.036 Sum_probs=79.7
Q ss_pred EEEEEecCcccC-CHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHH---HHhcCCce-eeeecCh---Hhh
Q 012587 269 VIYVSFGSIAVM-SRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELL---EATKERGC-IAGWVPQ---EEV 340 (460)
Q Consensus 269 ~V~vs~GS~~~~-~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~n~~-~~~~vp~---~~i 340 (460)
.+++..|++... ..+.+...+..+.+.+.+++++-. |. ....+.+. ++.++|+. +.++ +. ..+
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~-------g~-~~~~~~l~~~~~~~~~~v~~~~g~-~~~~~~~~ 362 (485)
T 1rzu_A 292 PLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGA-------GD-VALEGALLAAASRHHGRVGVAIGY-NEPLSHLM 362 (485)
T ss_dssp CEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEEC-------BC-HHHHHHHHHHHHHTTTTEEEEESC-CHHHHHHH
T ss_pred eEEEEEccCccccCHHHHHHHHHHHHhcCceEEEEeC-------Cc-hHHHHHHHHHHHhCCCcEEEecCC-CHHHHHHH
Confidence 367788887632 334433333334334666666542 11 00112222 23346887 5677 54 357
Q ss_pred hcccccccccc----cCChhHHHHHHHhCCceecccccccchhhHHHHHhhh---------ceeeeecCCcchHHHHHHH
Q 012587 341 LAHSAVGGFLT----HCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVW---------KLGLDIKDLCDRNIVEKAV 407 (460)
Q Consensus 341 l~~~~~~~~I~----HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~---------G~g~~~~~~~~~~~l~~~i 407 (460)
+..+++ +|. -|-..++.||+++|+|+|+... ......+ +.. +.|..+ ..-+.++|.++|
T Consensus 363 ~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~G~l~-~~~d~~~la~~i 434 (485)
T 1rzu_A 363 QAGCDA--IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTV-IDANHAALASKAATGVQF-SPVTLDGLKQAI 434 (485)
T ss_dssp HHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCCBEEE-SSCSHHHHHHHH
T ss_pred HhcCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhhee-cccccccccccCCcceEe-CCCCHHHHHHHH
Confidence 888998 552 2334689999999999999764 2333344 332 467777 456889999999
Q ss_pred HHHH---hHhHHHHHH
Q 012587 408 NDLM---VERKEEFME 420 (460)
Q Consensus 408 ~~~l---~~~~~~~~~ 420 (460)
.+++ +| +..++
T Consensus 435 ~~ll~~~~~--~~~~~ 448 (485)
T 1rzu_A 435 RRTVRYYHD--PKLWT 448 (485)
T ss_dssp HHHHHHHTC--HHHHH
T ss_pred HHHHHHhCC--HHHHH
Confidence 9999 55 55444
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=98.63 E-value=1.8e-06 Score=90.64 Aligned_cols=78 Identities=14% Similarity=0.147 Sum_probs=52.0
Q ss_pred cCCceeeee----cChHhhhc----cccccccccc----CChhHHHHHHHhCCceecccccccchhhHHHHHhhhceeee
Q 012587 326 KERGCIAGW----VPQEEVLA----HSAVGGFLTH----CGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLD 393 (460)
Q Consensus 326 ~~n~~~~~~----vp~~~il~----~~~~~~~I~H----GG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~ 393 (460)
.+++.+.++ +|+.++.. .+++ +|.- |-..++.||+++|+|+|+.. -......+ +.-+.|..
T Consensus 639 ~~~V~flG~~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIasd----~GG~~EiV-~dg~~Gll 711 (816)
T 3s28_A 639 NGQFRWISSQMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFATC----KGGPAEII-VHGKSGFH 711 (816)
T ss_dssp BBBEEEECCCCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEES----SBTHHHHC-CBTTTBEE
T ss_pred CCcEEEccCccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEeC----CCChHHHH-ccCCcEEE
Confidence 367888774 44455544 4565 5532 33469999999999999964 33344445 34456777
Q ss_pred ecCCcchHHHHHHHHHHH
Q 012587 394 IKDLCDRNIVEKAVNDLM 411 (460)
Q Consensus 394 ~~~~~~~~~l~~~i~~~l 411 (460)
+ ..-+.+++.++|.+++
T Consensus 712 v-~p~D~e~LA~aI~~lL 728 (816)
T 3s28_A 712 I-DPYHGDQAADTLADFF 728 (816)
T ss_dssp E-CTTSHHHHHHHHHHHH
T ss_pred e-CCCCHHHHHHHHHHHH
Confidence 7 4458889999997776
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=98.61 E-value=0.00011 Score=74.73 Aligned_cols=89 Identities=12% Similarity=0.096 Sum_probs=63.6
Q ss_pred CCceeeeecCh---Hhhhccccccccc---ccCChhHHHHHHHhCCceecccccccchhh-HHHHHhhhceeeeecCCcc
Q 012587 327 ERGCIAGWVPQ---EEVLAHSAVGGFL---THCGWNSTLESIVAGMPMICWPSFADQQIN-SRFVGEVWKLGLDIKDLCD 399 (460)
Q Consensus 327 ~n~~~~~~vp~---~~il~~~~~~~~I---~HGG~gs~~eal~~GvP~l~~P~~~DQ~~n-a~~~~e~~G~g~~~~~~~~ 399 (460)
++|.+.+++|+ ..++..+++ +| ..|+..++.||+++|+|+|++|...=.... +..+ ...|+...+.. +
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l-~~~g~~e~v~~--~ 508 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLN-HHLGLDEMNVA--D 508 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHH-HHHTCGGGBCS--S
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHH-HHCCChhhhcC--C
Confidence 67888999985 456788887 55 236678999999999999997753211222 3344 35677666633 8
Q ss_pred hHHHHHHHHHHHhHhHHHHHHHH
Q 012587 400 RNIVEKAVNDLMVERKEEFMESA 422 (460)
Q Consensus 400 ~~~l~~~i~~~l~~~~~~~~~~a 422 (460)
.+.+.+++.++++| +..+++.
T Consensus 509 ~~~la~~i~~l~~~--~~~~~~~ 529 (568)
T 2vsy_A 509 DAAFVAKAVALASD--PAALTAL 529 (568)
T ss_dssp HHHHHHHHHHHHHC--HHHHHHH
T ss_pred HHHHHHHHHHHhcC--HHHHHHH
Confidence 89999999999997 6655443
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=98.60 E-value=2.3e-05 Score=78.09 Aligned_cols=136 Identities=10% Similarity=0.078 Sum_probs=79.5
Q ss_pred CcEEEEEecCccc-CCHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHH---HHhcCCce-eeeecCh---H
Q 012587 267 QSVIYVSFGSIAV-MSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELL---EATKERGC-IAGWVPQ---E 338 (460)
Q Consensus 267 ~~~V~vs~GS~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~n~~-~~~~vp~---~ 338 (460)
+..+++..|.+.. ...+.+...+..+.+.+.+++++-.+ .. .....+. ++.++++. +.++ +. .
T Consensus 291 ~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g-------~~-~~~~~l~~~~~~~~~~v~~~~g~-~~~~~~ 361 (485)
T 2qzs_A 291 KVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAG-------DP-VLQEGFLAAAAEYPGQVGVQIGY-HEAFSH 361 (485)
T ss_dssp TSCEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEEEEE-------CH-HHHHHHHHHHHHSTTTEEEEESC-CHHHHH
T ss_pred CCeEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEEeCC-------ch-HHHHHHHHHHHhCCCcEEEeCCC-CHHHHH
Confidence 3445567777652 33344333333343346666655421 10 0112221 22346786 5677 53 3
Q ss_pred hhhcccccccccc----cCChhHHHHHHHhCCceecccccccchhhHHHHHhhh---------ceeeeecCCcchHHHHH
Q 012587 339 EVLAHSAVGGFLT----HCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVW---------KLGLDIKDLCDRNIVEK 405 (460)
Q Consensus 339 ~il~~~~~~~~I~----HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~---------G~g~~~~~~~~~~~l~~ 405 (460)
.++..+++ +|. -|...++.||+++|+|+|+... ......+ +.. +.|..+ ..-+.++|.+
T Consensus 362 ~~~~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~G~l~-~~~d~~~la~ 433 (485)
T 2qzs_A 362 RIMGGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTV-SDCSLENLADGVASGFVF-EDSNAWSLLR 433 (485)
T ss_dssp HHHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCCBEEE-CSSSHHHHHH
T ss_pred HHHHhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCcccee-ccCccccccccccceEEE-CCCCHHHHHH
Confidence 67888998 552 2334688999999999998754 2333444 332 467777 4568999999
Q ss_pred HHHHHH---hHhHHHHHHH
Q 012587 406 AVNDLM---VERKEEFMES 421 (460)
Q Consensus 406 ~i~~~l---~~~~~~~~~~ 421 (460)
+|.+++ +| ++.+++
T Consensus 434 ~i~~ll~~~~~--~~~~~~ 450 (485)
T 2qzs_A 434 AIRRAFVLWSR--PSLWRF 450 (485)
T ss_dssp HHHHHHHHHTS--HHHHHH
T ss_pred HHHHHHHHcCC--HHHHHH
Confidence 999999 55 554443
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=98.44 E-value=9.3e-05 Score=71.96 Aligned_cols=75 Identities=12% Similarity=0.021 Sum_probs=56.7
Q ss_pred hcCCceeeeecChH---hhhcccccccccc---cCC-hhHHHHHH-------HhCCceecccccccchhhHHHHHhhhce
Q 012587 325 TKERGCIAGWVPQE---EVLAHSAVGGFLT---HCG-WNSTLESI-------VAGMPMICWPSFADQQINSRFVGEVWKL 390 (460)
Q Consensus 325 ~~~n~~~~~~vp~~---~il~~~~~~~~I~---HGG-~gs~~eal-------~~GvP~l~~P~~~DQ~~na~~~~e~~G~ 390 (460)
..+|+.+.+++|+. .++..+++ +|. +-| ..++.||+ ++|+|+|+... + +.-..
T Consensus 263 l~~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v-~~~~~ 329 (406)
T 2hy7_A 263 YGDNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------V-VGPYK 329 (406)
T ss_dssp CCTTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------G-TCSCS
T ss_pred CCCCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------c-ccCcc
Confidence 34689999999964 56788887 442 334 46789999 99999999754 4 34345
Q ss_pred eee-ecCCcchHHHHHHHHHHHhH
Q 012587 391 GLD-IKDLCDRNIVEKAVNDLMVE 413 (460)
Q Consensus 391 g~~-~~~~~~~~~l~~~i~~~l~~ 413 (460)
|.. + ..-+.++|.++|.++++|
T Consensus 330 G~l~v-~~~d~~~la~ai~~ll~~ 352 (406)
T 2hy7_A 330 SRFGY-TPGNADSVIAAITQALEA 352 (406)
T ss_dssp SEEEE-CTTCHHHHHHHHHHHHHC
T ss_pred eEEEe-CCCCHHHHHHHHHHHHhC
Confidence 766 5 445889999999999987
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=98.43 E-value=5e-05 Score=73.86 Aligned_cols=83 Identities=12% Similarity=0.042 Sum_probs=55.4
Q ss_pred ceeeeecCh---Hhhhcccccccccc----cCChhHHHHHHHhCCceecccccccchhhHHHHHhhhce-----------
Q 012587 329 GCIAGWVPQ---EEVLAHSAVGGFLT----HCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKL----------- 390 (460)
Q Consensus 329 ~~~~~~vp~---~~il~~~~~~~~I~----HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~----------- 390 (460)
+.+.+|+|+ ..++..+++ +|. -|...++.||+++|+|+|+.... .....+ +. |.
T Consensus 256 v~~~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~~----g~~e~v-~~-~~~~~i~~~~~~~ 327 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAVG----GADDYF-SG-DCVYKIKPSAWIS 327 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECCH----HHHHHS-CT-TTSEEECCCEEEE
T ss_pred eeccCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCCC----ChHHHH-cc-Ccccccccccccc
Confidence 555699994 556788887 552 23346899999999999986542 333333 22 22
Q ss_pred -----ee--eecCCcchHHHHHHHHHHHhHhHHHHHHHHH
Q 012587 391 -----GL--DIKDLCDRNIVEKAVNDLMVERKEEFMESAD 423 (460)
Q Consensus 391 -----g~--~~~~~~~~~~l~~~i~~~l~~~~~~~~~~a~ 423 (460)
|. .+ ...+.++|.++| ++++| +..+++..
T Consensus 328 ~~~~~G~~gl~-~~~d~~~la~~i-~l~~~--~~~~~~~~ 363 (413)
T 3oy2_A 328 VDDRDGIGGIE-GIIDVDDLVEAF-TFFKD--EKNRKEYG 363 (413)
T ss_dssp CTTTCSSCCEE-EECCHHHHHHHH-HHTTS--HHHHHHHH
T ss_pred cccccCcceee-CCCCHHHHHHHH-HHhcC--HHHHHHHH
Confidence 44 55 334899999999 99997 66554433
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=98.41 E-value=9.6e-07 Score=75.34 Aligned_cols=138 Identities=13% Similarity=0.049 Sum_probs=88.1
Q ss_pred EEEEecCcccCCHHHHHHHHHHHhhC-CCcEEEEEccCCCCCCCCCCCCchHHH---HHhcCCceeeeecCh---Hhhhc
Q 012587 270 IYVSFGSIAVMSRDQLIEFYYGLVHS-KKSFLWVIRPDLISGKDGENQIPEELL---EATKERGCIAGWVPQ---EEVLA 342 (460)
Q Consensus 270 V~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~n~~~~~~vp~---~~il~ 342 (460)
+++..|+... ...+..++++++.+ +.+++++-.+. ....+..... ...++|+.+.+|+++ ..++.
T Consensus 25 ~i~~~G~~~~--~Kg~~~li~a~~~l~~~~l~i~G~~~------~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~ 96 (177)
T 2f9f_A 25 FWLSVNRIYP--EKRIELQLEVFKKLQDEKLYIVGWFS------KGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYS 96 (177)
T ss_dssp CEEEECCSSG--GGTHHHHHHHHHHCTTSCEEEEBCCC------TTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHH
T ss_pred EEEEEecccc--ccCHHHHHHHHHhCCCcEEEEEecCc------cHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHH
Confidence 4566777652 23355566777766 55665543211 1112222111 124569999999997 67888
Q ss_pred ccccccccc---cCC-hhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecCCcchHHHHHHHHHHHhHhHHHH
Q 012587 343 HSAVGGFLT---HCG-WNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVERKEEF 418 (460)
Q Consensus 343 ~~~~~~~I~---HGG-~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~~~~~~~ 418 (460)
.+++ +|. +.| ..++.||+++|+|+|+... ..+...+ +..+.|..+ ..+.+++.++|.++++| +..
T Consensus 97 ~adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i-~~~~~g~~~--~~d~~~l~~~i~~l~~~--~~~ 165 (177)
T 2f9f_A 97 RCKG--LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETV-INEKTGYLV--NADVNEIIDAMKKVSKN--PDK 165 (177)
T ss_dssp HCSE--EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHC-CBTTTEEEE--CSCHHHHHHHHHHHHHC--TTT
T ss_pred hCCE--EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHh-cCCCccEEe--CCCHHHHHHHHHHHHhC--HHH
Confidence 8998 554 334 4599999999999998753 3444555 344567766 56899999999999986 544
Q ss_pred -HHHHHHHH
Q 012587 419 -MESADRMA 426 (460)
Q Consensus 419 -~~~a~~l~ 426 (460)
++++++.+
T Consensus 166 ~~~~~~~~a 174 (177)
T 2f9f_A 166 FKKDCFRRA 174 (177)
T ss_dssp THHHHHHHH
T ss_pred HHHHHHHHH
Confidence 55555444
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=98.25 E-value=0.00033 Score=67.19 Aligned_cols=95 Identities=13% Similarity=0.173 Sum_probs=65.1
Q ss_pred CceeeeecC-hHhhhcccccccccc---c--CChhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecCCcchH
Q 012587 328 RGCIAGWVP-QEEVLAHSAVGGFLT---H--CGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRN 401 (460)
Q Consensus 328 n~~~~~~vp-~~~il~~~~~~~~I~---H--GG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~~~ 401 (460)
++.+.++.. -..+++.+++ ++. . +|..++.||+++|+|+|.-|...+..+....+. +.|.++.. -+.+
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~-~~G~l~~~---~d~~ 334 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLE-KEGAGFEV---KNET 334 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHH-HTTCEEEC---CSHH
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHH-HCCCEEEe---CCHH
Confidence 344545444 3778888887 443 1 234789999999999998777777776666552 45777666 3789
Q ss_pred HHHHHHHHHHhH-hHHHHHHHHHHHHHH
Q 012587 402 IVEKAVNDLMVE-RKEEFMESADRMANL 428 (460)
Q Consensus 402 ~l~~~i~~~l~~-~~~~~~~~a~~l~~~ 428 (460)
+|.+++.++++| ....+.+++++..+.
T Consensus 335 ~La~ai~~ll~d~~r~~mg~~ar~~~~~ 362 (374)
T 2xci_A 335 ELVTKLTELLSVKKEIKVEEKSREIKGC 362 (374)
T ss_dssp HHHHHHHHHHHSCCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHh
Confidence 999999999974 112466666665544
|
| >1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7 | Back alignment and structure |
|---|
Probab=97.84 E-value=0.0048 Score=58.26 Aligned_cols=102 Identities=9% Similarity=-0.003 Sum_probs=65.8
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhC--CCeEEEEeCccchhHHhhccccccccccCCCCc-eEEecCCCCCCCCCCCC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHA--GIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGF-QFKTLTDGLPRDHPRTP 83 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 83 (460)
|||+++.....||+.-..++.++|+++ +.+|++++.+.+.+.+.. .+.+ ++..++.. .. .
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~-----------~p~i~~v~~~~~~--~~----~ 63 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSR-----------MPEVNEAIPMPLG--HG----A 63 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTT-----------CTTEEEEEEC------------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhc-----------CCccCEEEEecCC--cc----c
Confidence 599999999999999999999999997 999999999765554432 2334 34444310 00 0
Q ss_pred CChHHHHHHHHhhCcHHHHHHHHcC-CCCccEEEEcCCcchHHHHHHHhCCceEE
Q 012587 84 DKFPELVDSLNCATPPLLKEMVSDS-KSPVNCIITDGYMSRAIDAAREVGVSIIY 137 (460)
Q Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~~~-~~~pD~vv~D~~~~~~~~~A~~lgiP~v~ 137 (460)
. ....+.++.+.+ ..+||++|.-........++...|+|...
T Consensus 64 ~------------~~~~~~~l~~~l~~~~~D~vid~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 64 L------------EIGERRKLGHSLREKRYDRAYVLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp -------------CHHHHHHHHHHTTTTTCSEEEECSCCSGGGHHHHHTTCSEEE
T ss_pred c------------chHHHHHHHHHHHhcCCCEEEECCCChHHHHHHHHhCCCEEe
Confidence 0 112223344444 34899998433334566778888999743
|
| >3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula} | Back alignment and structure |
|---|
Probab=97.83 E-value=0.0021 Score=60.88 Aligned_cols=106 Identities=17% Similarity=0.149 Sum_probs=71.0
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhC--CCeEEEEeCccchhHHhhccccccccccCCCCce-EEecCCCCCCCCC
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHA--GIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQ-FKTLTDGLPRDHP 80 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 80 (460)
..++||+++...+.||+.-+.++.++|+++ +.+|++++.+.+.+-+.. .+.++ ++.++..
T Consensus 6 l~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~-----------~p~vd~vi~~~~~------ 68 (349)
T 3tov_A 6 LDYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEY-----------NPNIDELIVVDKK------ 68 (349)
T ss_dssp CTTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSS-----------CTTCSEEEEECCS------
T ss_pred CCCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhc-----------CCCccEEEEeCcc------
Confidence 356799999999999999999999999998 999999999666544432 33453 5555421
Q ss_pred CCCCChHHHHHHHHhhCcHHHHHHHHcCCCCc-cEEEEcCCcchHHHHHHHhCCceEE
Q 012587 81 RTPDKFPELVDSLNCATPPLLKEMVSDSKSPV-NCIITDGYMSRAIDAAREVGVSIIY 137 (460)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p-D~vv~D~~~~~~~~~A~~lgiP~v~ 137 (460)
.....+..+. ..++++-+. ++ |++|.-........++...|+|...
T Consensus 69 ----~~~~~~~~~~----~l~~~Lr~~---~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 69 ----GRHNSISGLN----EVAREINAK---GKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp ----SHHHHHHHHH----HHHHHHHHH---CCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred ----cccccHHHHH----HHHHHHhhC---CCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 1111111111 222233333 89 9999765555667788899999755
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00028 Score=66.52 Aligned_cols=111 Identities=17% Similarity=0.153 Sum_probs=81.3
Q ss_pred CceeeeecChHhh---hcccccccccccCCh---------hHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeec
Q 012587 328 RGCIAGWVPQEEV---LAHSAVGGFLTHCGW---------NSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIK 395 (460)
Q Consensus 328 n~~~~~~vp~~~i---l~~~~~~~~I~HGG~---------gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~ 395 (460)
|+.+.+|+|+.++ |..++.+++.+-+.. +-+.|++++|+|+|+.+ ...++..+ ++.|+|..++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v-~~~~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELI-ENNGLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHH-HHHTCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHH-HhCCeEEEeC
Confidence 9999999998665 445566444433333 35889999999999754 45677777 5789999994
Q ss_pred CCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Q 012587 396 DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDI 450 (460)
Q Consensus 396 ~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l 450 (460)
+.+++.+++..+..++...+++|+++.+++++. |-...+++.+.+.+|
T Consensus 290 ---~~~e~~~~i~~l~~~~~~~m~~na~~~a~~~~~----~~f~k~~l~~~~~~~ 337 (339)
T 3rhz_A 290 ---DVEEAIMKVKNVNEDEYIELVKNVRSFNPILRK----GFFTRRLLTESVFQA 337 (339)
T ss_dssp ---SHHHHHHHHHHCCHHHHHHHHHHHHHHTHHHHT----THHHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHHh
Confidence 568888888887766567889999999999887 555555655555544
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00086 Score=55.82 Aligned_cols=131 Identities=12% Similarity=0.129 Sum_probs=76.2
Q ss_pred cEEEEEecCcccCCHHHHHHHHHHHhhCC--CcE-EEEEccCCCCCCCCCCCCchHHH---HHhcCCceeeeecCh---H
Q 012587 268 SVIYVSFGSIAVMSRDQLIEFYYGLVHSK--KSF-LWVIRPDLISGKDGENQIPEELL---EATKERGCIAGWVPQ---E 338 (460)
Q Consensus 268 ~~V~vs~GS~~~~~~~~~~~~~~al~~~~--~~~-i~~~~~~~~~~~~~~~~~~~~~~---~~~~~n~~~~~~vp~---~ 338 (460)
+++++..|+.... ..+..++++++.+. .++ ++.++. +. ....+. ++.+.++.+ +|+|+ .
T Consensus 2 ~~~i~~~G~~~~~--Kg~~~li~a~~~l~~~~~~~l~i~G~------g~---~~~~~~~~~~~~~~~v~~-g~~~~~~~~ 69 (166)
T 3qhp_A 2 PFKIAMVGRYSNE--KNQSVLIKAVALSKYKQDIVLLLKGK------GP---DEKKIKLLAQKLGVKAEF-GFVNSNELL 69 (166)
T ss_dssp CEEEEEESCCSTT--TTHHHHHHHHHTCTTGGGEEEEEECC------ST---THHHHHHHHHHHTCEEEC-CCCCHHHHH
T ss_pred ceEEEEEeccchh--cCHHHHHHHHHHhccCCCeEEEEEeC------Cc---cHHHHHHHHHHcCCeEEE-eecCHHHHH
Confidence 5677888887532 23455666666542 133 223321 11 112222 223347777 99986 4
Q ss_pred hhhcccccccccc----cCChhHHHHHHHhCC-ceecccccccchhhHHHHHhhhceeeeecCCcchHHHHHHHHHHHhH
Q 012587 339 EVLAHSAVGGFLT----HCGWNSTLESIVAGM-PMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVE 413 (460)
Q Consensus 339 ~il~~~~~~~~I~----HGG~gs~~eal~~Gv-P~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~~ 413 (460)
.++..+++ +|. -|...++.||+++|+ |+|.....+. ....+ +..+. .+ ..-+.+++.+++.++++|
T Consensus 70 ~~~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~---~~~~~-~~~~~--~~-~~~~~~~l~~~i~~l~~~ 140 (166)
T 3qhp_A 70 EILKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPLSA---TRQFA-LDERS--LF-EPNNAKDLSAKIDWWLEN 140 (166)
T ss_dssp HHHTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTCG---GGGGC-SSGGG--EE-CTTCHHHHHHHHHHHHHC
T ss_pred HHHHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCCc---hhhhc-cCCce--EE-cCCCHHHHHHHHHHHHhC
Confidence 56788887 554 244569999999996 9999432221 11122 22222 23 446899999999999987
Q ss_pred hHHHHHHH
Q 012587 414 RKEEFMES 421 (460)
Q Consensus 414 ~~~~~~~~ 421 (460)
+..+++
T Consensus 141 --~~~~~~ 146 (166)
T 3qhp_A 141 --KLERER 146 (166)
T ss_dssp --HHHHHH
T ss_pred --HHHHHH
Confidence 554433
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=97.48 E-value=0.0012 Score=66.43 Aligned_cols=145 Identities=9% Similarity=0.015 Sum_probs=92.2
Q ss_pred CcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEE--ccCCCCCCCCCCCCchHHH-HHhcCCceeeeecChHh---h
Q 012587 267 QSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVI--RPDLISGKDGENQIPEELL-EATKERGCIAGWVPQEE---V 340 (460)
Q Consensus 267 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~-~~~~~n~~~~~~vp~~~---i 340 (460)
..++|.+|++..+..++.++...+.+++.+..++|.. +.. . +....+-..+. .-+.+++.+.+.+|..+ .
T Consensus 440 G~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~--~--g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~ 515 (631)
T 3q3e_A 440 EVVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQS--N--GITHPYVERFIKSYLGDSATAHPHSPYHQYLRI 515 (631)
T ss_dssp SEEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSC--C--GGGHHHHHHHHHHHHGGGEEEECCCCHHHHHHH
T ss_pred CeEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCC--c--hhhHHHHHHHHHcCCCccEEEcCCCCHHHHHHH
Confidence 3789999999999999999999999998877776643 211 0 11001111111 12346777888888654 4
Q ss_pred hccccccccc---ccCChhHHHHHHHhCCceecccccccc-hhhHHHHHhhhceeee-ecCCcchHHHHHHHHHHHhHhH
Q 012587 341 LAHSAVGGFL---THCGWNSTLESIVAGMPMICWPSFADQ-QINSRFVGEVWKLGLD-IKDLCDRNIVEKAVNDLMVERK 415 (460)
Q Consensus 341 l~~~~~~~~I---~HGG~gs~~eal~~GvP~l~~P~~~DQ-~~na~~~~e~~G~g~~-~~~~~~~~~l~~~i~~~l~~~~ 415 (460)
+..+++ ++ ..+|..|+.|||++|||+|.++-..=. ..-+..+ ...|+... +. -+.++..+...++.+|
T Consensus 516 y~~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL-~~~GLpE~LIA--~d~eeYv~~Av~La~D-- 588 (631)
T 3q3e_A 516 LHNCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLF-KRLGLPEWLIA--NTVDEYVERAVRLAEN-- 588 (631)
T ss_dssp HHTCSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHH-HHTTCCGGGEE--SSHHHHHHHHHHHHHC--
T ss_pred HhcCcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHH-HhcCCCcceec--CCHHHHHHHHHHHhCC--
Confidence 477887 54 337889999999999999998743211 1112233 34676542 32 3577777777777777
Q ss_pred HHHHHHH
Q 012587 416 EEFMESA 422 (460)
Q Consensus 416 ~~~~~~a 422 (460)
+..+++.
T Consensus 589 ~~~l~~L 595 (631)
T 3q3e_A 589 HQERLEL 595 (631)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5554443
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=97.40 E-value=0.003 Score=54.21 Aligned_cols=83 Identities=10% Similarity=0.006 Sum_probs=59.5
Q ss_pred Ccee-eeecCh---Hhhhccccccccccc----CChhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecCCcc
Q 012587 328 RGCI-AGWVPQ---EEVLAHSAVGGFLTH----CGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCD 399 (460)
Q Consensus 328 n~~~-~~~vp~---~~il~~~~~~~~I~H----GG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~ 399 (460)
|+.+ .+++++ ..++..+++ +|.- |...++.||+++|+|+|+.... .....+ ..+.|..+ ..-+
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~----~~~e~~--~~~~g~~~-~~~~ 166 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLRDII--TNETGILV-KAGD 166 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESCH----HHHHHC--CTTTCEEE-CTTC
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCCC----ChHHHc--CCCceEEe-cCCC
Confidence 8999 899984 577888887 5532 2346899999999999887532 233333 23567666 4458
Q ss_pred hHHHHHHHHHHHh-HhHHHHHHH
Q 012587 400 RNIVEKAVNDLMV-ERKEEFMES 421 (460)
Q Consensus 400 ~~~l~~~i~~~l~-~~~~~~~~~ 421 (460)
.+.+.++|.++++ | +..+++
T Consensus 167 ~~~l~~~i~~l~~~~--~~~~~~ 187 (200)
T 2bfw_A 167 PGELANAILKALELS--RSDLSK 187 (200)
T ss_dssp HHHHHHHHHHHHHCC--HHHHHH
T ss_pred HHHHHHHHHHHHhcC--HHHHHH
Confidence 8999999999998 7 654443
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=97.39 E-value=0.0078 Score=62.75 Aligned_cols=119 Identities=18% Similarity=0.256 Sum_probs=82.5
Q ss_pred CCCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHHHH------hcCCceeeeecChH
Q 012587 265 PKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEA------TKERGCIAGWVPQE 338 (460)
Q Consensus 265 ~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~------~~~n~~~~~~vp~~ 338 (460)
++..+||++|.+..+.++..+....+.|++.+--.+|....+. .....+.+. .++++.+.+..|..
T Consensus 520 p~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~--------~~~~~l~~~~~~~gi~~~r~~f~~~~~~~ 591 (723)
T 4gyw_A 520 PEDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPA--------VGEPNIQQYAQNMGLPQNRIIFSPVAPKE 591 (723)
T ss_dssp CTTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTG--------GGHHHHHHHHHHTTCCGGGEEEEECCCHH
T ss_pred CCCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcH--------HHHHHHHHHHHhcCCCcCeEEECCCCCHH
Confidence 3567999999999999999999999999999888888875321 111222211 13567777888854
Q ss_pred h---hhcccccccccc---cCChhHHHHHHHhCCceeccccccc-chhhHHHHHhhhceeeee
Q 012587 339 E---VLAHSAVGGFLT---HCGWNSTLESIVAGMPMICWPSFAD-QQINSRFVGEVWKLGLDI 394 (460)
Q Consensus 339 ~---il~~~~~~~~I~---HGG~gs~~eal~~GvP~l~~P~~~D-Q~~na~~~~e~~G~g~~~ 394 (460)
+ .+..+++ ++- .+|.+|+.|||+.|||+|.++-..= -..-+..+ ..+|+...+
T Consensus 592 ~~l~~~~~~Di--~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l-~~~gl~e~i 651 (723)
T 4gyw_A 592 EHVRRGQLADV--CLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQL-TCLGCLELI 651 (723)
T ss_dssp HHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHH-HHHTCGGGB
T ss_pred HHHHHhCCCeE--EeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHH-HHcCCcccc
Confidence 4 4456665 654 8999999999999999999984221 11222344 356766555
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=95.27 E-value=0.06 Score=52.05 Aligned_cols=84 Identities=12% Similarity=0.086 Sum_probs=56.8
Q ss_pred CCceeeeecChH---hhhcccccccccc--c-CCh-hHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecCCcc
Q 012587 327 ERGCIAGWVPQE---EVLAHSAVGGFLT--H-CGW-NSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCD 399 (460)
Q Consensus 327 ~n~~~~~~vp~~---~il~~~~~~~~I~--H-GG~-gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~ 399 (460)
+++.+.+++|+. .++..+++ ||. . =|. .++.||+++|+|+|+ -..+ ....+ +.-..|..+ ..-+
T Consensus 295 ~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v-~~~~~G~lv-~~~d 365 (413)
T 2x0d_A 295 IHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLS-NWHSNIVSL-EQLN 365 (413)
T ss_dssp EEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGG-GTBTTEEEE-SSCS
T ss_pred CcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhh-hcCCCEEEe-CCCC
Confidence 578888999864 56778887 553 2 133 478999999999997 3222 12234 342457766 4568
Q ss_pred hHHHHHHHHHHHhHhHHHHHHH
Q 012587 400 RNIVEKAVNDLMVERKEEFMES 421 (460)
Q Consensus 400 ~~~l~~~i~~~l~~~~~~~~~~ 421 (460)
+++|+++|.++++| +..+++
T Consensus 366 ~~~la~ai~~ll~~--~~~~~~ 385 (413)
T 2x0d_A 366 PENIAETLVELCMS--FNNRDV 385 (413)
T ss_dssp HHHHHHHHHHHHHH--TC----
T ss_pred HHHHHHHHHHHHcC--HHHHHH
Confidence 99999999999998 666655
|
| >3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0 | Back alignment and structure |
|---|
Probab=95.04 E-value=0.027 Score=49.87 Aligned_cols=116 Identities=12% Similarity=0.115 Sum_probs=64.1
Q ss_pred CCCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCC
Q 012587 3 KQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRT 82 (460)
Q Consensus 3 ~~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (460)
.+++||||+..=-+. +.--+.+|+++|++ +|+|+++.+.....-. |..... ...+.+..+.+++ ..
T Consensus 8 ~~~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg~----g~siTl---~~pl~~~~~~~~~-----~~ 73 (261)
T 3ty2_A 8 ATPKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRSGA----SNSLTL---NAPLHIKNLENGM-----IS 73 (261)
T ss_dssp ---CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCTTC----TTCCCC---SSCEEEEECTTSC-----EE
T ss_pred cCCCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCcCc----ccceec---CCCeEEEEecCCe-----EE
Confidence 467799988876655 44557888999987 8999999985543222 222221 2225555543221 12
Q ss_pred CCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCC----------cc---hHHHHHHHhCCceEEEecc
Q 012587 83 PDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGY----------MS---RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~----------~~---~~~~~A~~lgiP~v~~~~~ 141 (460)
......-|-.+.- ..++ +.+||+||+..- ++ .+..-|..+|||.|.++..
T Consensus 74 v~GTPaDCV~lal------~~l~---~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~ 136 (261)
T 3ty2_A 74 VEGTPTDCVHLAI------TGVL---PEMPDMVVAGINAGPNLGDDVWYSGTVAAAMEGRFLGLPALAVSLG 136 (261)
T ss_dssp ESSCHHHHHHHHT------TTTS---SSCCSEEEEEEEESCCCGGGGGTCHHHHHC-CCSTTSCCEEEEEEC
T ss_pred ECCCHHHHHHHHH------HHhc---CCCCCEEEECCcCCCCCCCCcCCchHHHHHHHHHHcCCCeEEEEcC
Confidence 2233333333321 1222 238999997532 22 2333345789999998764
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=94.32 E-value=0.096 Score=52.49 Aligned_cols=130 Identities=12% Similarity=0.058 Sum_probs=73.6
Q ss_pred cEEEEEecCccc-CCHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHH---HHHhcCCceeeeecCh---Hhh
Q 012587 268 SVIYVSFGSIAV-MSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEEL---LEATKERGCIAGWVPQ---EEV 340 (460)
Q Consensus 268 ~~V~vs~GS~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~n~~~~~~vp~---~~i 340 (460)
.++++..|.... ...+.+...+..+.+.+.++++...+ .. .....+ ....++++.+....+. ..+
T Consensus 327 ~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G-------~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 398 (536)
T 3vue_A 327 IPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTG-------KK-KFEKLLKSMEEKYPGKVRAVVKFNAPLAHLI 398 (536)
T ss_dssp SCEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCB-------CH-HHHHHHHHHHHHSTTTEEEECSCCHHHHHHH
T ss_pred CcEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEecc-------Cc-hHHHHHHHHHhhcCCceEEEEeccHHHHHHH
Confidence 334466777653 23444444444444456676655431 11 111111 1234678888877775 356
Q ss_pred hccccccccccc---CCh-hHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeec---------CCcchHHHHHHH
Q 012587 341 LAHSAVGGFLTH---CGW-NSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIK---------DLCDRNIVEKAV 407 (460)
Q Consensus 341 l~~~~~~~~I~H---GG~-gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~---------~~~~~~~l~~~i 407 (460)
++.+++ ||.= =|. .+++||+++|+|+|+....+ ....+ +.-..|.... ...+.+.|.++|
T Consensus 399 ~~~aD~--~v~PS~~E~fgl~~lEAma~G~PvI~s~~gG----~~e~V-~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai 471 (536)
T 3vue_A 399 MAGADV--LAVPSRFEPCGLIQLQGMRYGTPCACASTGG----LVDTV-IEGKTGFHMGRLSVDCKVVEPSDVKKVAATL 471 (536)
T ss_dssp HHHCSE--EEECCSCCSSCSHHHHHHHTTCCEEECSCTH----HHHHC-CBTTTEEECCCCCSCTTCCCHHHHHHHHHHH
T ss_pred HHhhhe--eecccccCCCCHHHHHHHHcCCCEEEcCCCC----chhee-eCCCCccccccCCCceeEECCCCHHHHHHHH
Confidence 788887 5532 233 48999999999999876432 22233 2212333221 345678899999
Q ss_pred HHHHh
Q 012587 408 NDLMV 412 (460)
Q Consensus 408 ~~~l~ 412 (460)
+++|+
T Consensus 472 ~ral~ 476 (536)
T 3vue_A 472 KRAIK 476 (536)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98886
|
| >2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=93.61 E-value=0.41 Score=42.45 Aligned_cols=115 Identities=11% Similarity=0.173 Sum_probs=64.2
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCCCCC
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPDK 85 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (460)
|.|||+..=-+. +.--+.+|+++|.+.| +|+++.+.....-. |..... ...+++..+.... ......
T Consensus 1 Mp~ILlTNDDGi-~apGi~~L~~~l~~~g-~V~VvAP~~~~Sg~----g~siT~---~~pl~~~~~~~~~----~~~v~G 67 (251)
T 2wqk_A 1 MPTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGV----GHSLTF---TEPLKMRKIDTDF----YTVIDG 67 (251)
T ss_dssp -CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTS----CCSCCC---SSCEEEEEEETTE----EEETTC
T ss_pred CCEEEEEcCCCC-CcHHHHHHHHHHHhCC-CEEEEeeCCCCccc----ccCcCC---CCCceeEEeeccc----eeecCC
Confidence 568888765543 3334778999999998 59988875542221 222222 2224454443210 011222
Q ss_pred hHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcC----------Ccc---hHHHHHHHhCCceEEEecc
Q 012587 86 FPELVDSLNCATPPLLKEMVSDSKSPVNCIITDG----------YMS---RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 86 ~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~----------~~~---~~~~~A~~lgiP~v~~~~~ 141 (460)
...-|-.+. +..++.+ .+||+||+.. +++ .|+.-|..+|||.|.++..
T Consensus 68 TPaDCV~la------l~~~l~~--~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~~ 128 (251)
T 2wqk_A 68 TPADCVHLG------YRVILEE--KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAF 128 (251)
T ss_dssp CHHHHHHHH------HHTTTTT--CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEE
T ss_pred ChHHHHhhh------hhhhcCC--CCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEcc
Confidence 333333332 2334444 3899999842 222 5667788999999998753
|
| >1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A* | Back alignment and structure |
|---|
Probab=90.20 E-value=1.1 Score=39.45 Aligned_cols=115 Identities=10% Similarity=0.085 Sum_probs=63.2
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCCCCCh
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPDKF 86 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (460)
||||+..=-+. |.--+.+|+++|++.| +|+++.+.....-. |..... ...+++..++.+-....+ .....
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~----g~siTl---~~pl~~~~~~~~~~~~~~-~v~GT 70 (247)
T 1j9j_A 1 MRILVTNDDGI-QSKGIIVLAELLSEEH-EVFVVAPDKERSAT----GHSITI---HVPLWMKKVFISERVVAY-STTGT 70 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTC----TTCCCC---SSCCCEEECCCSSSEEEE-EESSC
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCC----cccccC---CCCeEEEEeccCCCCceE-EECCc
Confidence 57777665544 3344789999999988 89999985542222 222222 223555555332000001 11222
Q ss_pred HHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCC----------cc---hHHHHHHHhCCceEEEec
Q 012587 87 PELVDSLNCATPPLLKEMVSDSKSPVNCIITDGY----------MS---RAIDAAREVGVSIIYFRT 140 (460)
Q Consensus 87 ~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~----------~~---~~~~~A~~lgiP~v~~~~ 140 (460)
..-|-.+. +..++. .+||+||+..- ++ .+..-|..+|||.|.++.
T Consensus 71 PaDCV~la------l~~l~~---~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 128 (247)
T 1j9j_A 71 PADCVKLA------YNVVMD---KRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISS 128 (247)
T ss_dssp HHHHHHHH------HHTTST---TCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHH------HHhhcc---CCCCEEEECCccCCCCCcCeecchhHHHHHHHHhcCCCeEEEec
Confidence 22232222 122332 38999997532 22 456667789999999876
|
| >2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A | Back alignment and structure |
|---|
Probab=89.78 E-value=2.6 Score=37.00 Aligned_cols=115 Identities=13% Similarity=0.095 Sum_probs=65.0
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCC-CC-CCCCCC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLP-RD-HPRTPD 84 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~ 84 (460)
||||+..=-+. +.--+.+|+++|++.| +|+++.+.....- .|..... ...+++..++.+.+ .+ ......
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg----~g~siTl---~~pl~~~~~~~~~~~~~~~~~~v~ 71 (244)
T 2e6c_A 1 MRILVTNDDGI-YSPGLWALAEAASQFG-EVFVAAPDTEQSA----AGHAITI---AHPVRAYPHPSPLHAPHFPAYRVR 71 (244)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEECSSCCC----CCSSCCC---SSCBEEEECCCCTTSCCCCEEEEE
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcC----CcccccC---CCCeEEEEeccCcCCCCCceEEEc
Confidence 57777665544 3344789999999988 8999998554221 1222222 22366666643210 00 001122
Q ss_pred ChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCC----------cc---hHHHHHHHhCCceEEEecc
Q 012587 85 KFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGY----------MS---RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 85 ~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~----------~~---~~~~~A~~lgiP~v~~~~~ 141 (460)
....-|-.+.- . +. .+||+||+..- ++ .+..-|..+|||.|.++..
T Consensus 72 GTPaDCV~lal------~--l~---~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~ 130 (244)
T 2e6c_A 72 GTPADCVALGL------H--LF---GPVDLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFGLSAAAFSVP 130 (244)
T ss_dssp SCHHHHHHHHH------H--HS---CSCCEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CcHHHHHHHHH------c--CC---CCCCEEEECCccCCCCCcCeechHhHHHHHHHHhcCCCeEEEecc
Confidence 22333333321 1 32 38999997532 22 4566677899999998753
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=88.80 E-value=0.21 Score=50.00 Aligned_cols=37 Identities=16% Similarity=0.381 Sum_probs=28.3
Q ss_pred CCCcEEEEEcC--------CCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 4 QDHVHVAILPL--------PAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 4 ~~~~~il~~~~--------~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
.+.|||+++++ |+.|++ .-+|+++|+++||+|+++++
T Consensus 7 ~~~MkIl~vs~E~~P~~K~GGLadv--v~~L~~aL~~~G~~V~Vi~P 51 (536)
T 3vue_A 7 HHHMNVVFVGAEMAPWSKTGGLGDV--LGGLPPAMAANGHRVMVISP 51 (536)
T ss_dssp -CCCEEEEECSCBTTTBCSSHHHHH--HHHHHHHHHTTTCEEEEEEE
T ss_pred CCCcEEEEEEEeccchhccCcHHHH--HHHHHHHHHHcCCeEEEEec
Confidence 34689999974 333344 55789999999999999985
|
| >1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1 | Back alignment and structure |
|---|
Probab=88.66 E-value=3 Score=37.40 Aligned_cols=114 Identities=10% Similarity=0.033 Sum_probs=63.9
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCCCCCh
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPDKF 86 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (460)
||||+..=-+. +.--+.+|+++|++.| +|+++.+.....-. |..... ...+++..++.+ ....+ .....
T Consensus 1 M~ILlTNDDGi-~ApGi~aL~~aL~~~g-~V~VVAP~~~qSg~----g~siTl---~~pl~~~~~~~~-~~~~~-~v~GT 69 (280)
T 1l5x_A 1 MKILVTNDDGV-HSPGLRLLYQFALSLG-DVDVVAPESPKSAT----GLGITL---HKPLRMYEVDLC-GFRAI-ATSGT 69 (280)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHGGGS-EEEEEEESSCTTTS----CSSCCC---SSCBCEEEEECS-SSEEE-EESSC
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCC----cccccC---CCCeEEEEeccC-CCceE-EECCc
Confidence 57777665544 3344789999999998 99999985542222 222222 223555555321 00011 12222
Q ss_pred HHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcC-----------Ccc---hHHHHHHHhCCceEEEecc
Q 012587 87 PELVDSLNCATPPLLKEMVSDSKSPVNCIITDG-----------YMS---RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 87 ~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~-----------~~~---~~~~~A~~lgiP~v~~~~~ 141 (460)
..-|-.+. +..+ .- +||+||+.. +++ .+..-|..+|||.|.++..
T Consensus 70 PaDCV~la------l~~l--~~--~PDLVvSGIN~G~Nlg~d~v~ySGTVgAA~Ea~~~GiPaIA~S~~ 128 (280)
T 1l5x_A 70 PSDTVYLA------TFGL--GR--KYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSAY 128 (280)
T ss_dssp HHHHHHHH------HHHH--TS--CCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEEEEEEC
T ss_pred HHHHHHHH------HhcC--CC--CCCEEEECCccCCcCCccccccchhHHHHHHHHHcCCCeEEEEcc
Confidence 33333322 2333 32 999999742 222 4556677899999999764
|
| >3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A | Back alignment and structure |
|---|
Probab=88.14 E-value=3.5 Score=36.25 Aligned_cols=38 Identities=18% Similarity=0.248 Sum_probs=30.9
Q ss_pred CCCcEEEEEcC--CCCCCHHHHHHHHHHHHhCCCeEEEEe
Q 012587 4 QDHVHVAILPL--PAVGHVNSMLNLAELLGHAGIKITFLN 41 (460)
Q Consensus 4 ~~~~~il~~~~--~~~Gh~~p~l~La~~L~~rGH~Vt~~~ 41 (460)
++|+|.+|++. ..-|-..-++.|++.|+++|.+|.++=
T Consensus 18 ~~m~k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~fK 57 (242)
T 3qxc_A 18 YFQGHMLFISATNTNAGKTTCARLLAQYCNACGVKTILLK 57 (242)
T ss_dssp -CCCEEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred hhcCcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEEe
Confidence 45667666655 478899999999999999999999984
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=87.93 E-value=0.27 Score=47.45 Aligned_cols=40 Identities=18% Similarity=0.218 Sum_probs=31.8
Q ss_pred CCCcEEEEEcCCCC-----CCHHHHHHHHHHHHhCCCeEEEEeCc
Q 012587 4 QDHVHVAILPLPAV-----GHVNSMLNLAELLGHAGIKITFLNTE 43 (460)
Q Consensus 4 ~~~~~il~~~~~~~-----Gh~~p~l~La~~L~~rGH~Vt~~~~~ 43 (460)
.++|||++++.... |=......++++|+++||+|++++..
T Consensus 44 ~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~ 88 (413)
T 2x0d_A 44 IKGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTD 88 (413)
T ss_dssp CCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESS
T ss_pred CCCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEec
Confidence 46789998886421 43456889999999999999999974
|
| >2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=87.55 E-value=2.3 Score=36.65 Aligned_cols=105 Identities=7% Similarity=0.092 Sum_probs=59.2
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCC--eEEEEeCcc-chh--HHhhccccccccccCCCCceEEecCCCCCCCCC
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGI--KITFLNTEH-YYD--RVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHP 80 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH--~Vt~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (460)
|+||+|+..|+.. -+.++.++|.+.+| +|..+.+.. ... ..++.. ++.+..++.. .
T Consensus 1 m~rI~vl~SG~g~---~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~-----------gIp~~~~~~~----~- 61 (216)
T 2ywr_A 1 MLKIGVLVSGRGS---NLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKH-----------NVECKVIQRK----E- 61 (216)
T ss_dssp CEEEEEEECSCCH---HHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHH-----------TCCEEECCGG----G-
T ss_pred CCEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHc-----------CCCEEEeCcc----c-
Confidence 5799999888743 36677788888888 765554432 222 122222 3555444311 0
Q ss_pred CCCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcc-hHHHHHHHhCCceEEEecc
Q 012587 81 RTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS-RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~-~~~~~A~~lgiP~v~~~~~ 141 (460)
..+ . ....+.+.+.++++ +||+||.-.+.. ....+-+.....++-++++
T Consensus 62 --~~~-r-------~~~~~~~~~~l~~~--~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 111 (216)
T 2ywr_A 62 --FPS-K-------KEFEERMALELKKK--GVELVVLAGFMRILSHNFLKYFPNKVINIHPS 111 (216)
T ss_dssp --SSS-H-------HHHHHHHHHHHHHT--TCCEEEESSCCSCCCHHHHTTSTTCEEEEESS
T ss_pred --ccc-h-------hhhhHHHHHHHHhc--CCCEEEEeCchhhCCHHHHhhccCCeEEEcCC
Confidence 001 0 11224456677777 999999876633 3444445555567776665
|
| >3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii} | Back alignment and structure |
|---|
Probab=86.92 E-value=3.5 Score=35.81 Aligned_cols=107 Identities=10% Similarity=0.066 Sum_probs=62.5
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhC--CCeEEEEeCcc-chh--HHhhccccccccccCCCCceEEecCCCCCCC
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHA--GIKITFLNTEH-YYD--RVIRHSSDAFSRYMQIPGFQFKTLTDGLPRD 78 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~r--GH~Vt~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (460)
.+||||+|+..|+. + -+.++.++|.+. +++|..+.+.. ... ..++.. ++.+..++..
T Consensus 20 ~~~~rI~~l~SG~g-~--~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~-----------gIp~~~~~~~---- 81 (229)
T 3auf_A 20 GHMIRIGVLISGSG-T--NLQAILDGCREGRIPGRVAVVISDRADAYGLERARRA-----------GVDALHMDPA---- 81 (229)
T ss_dssp TTCEEEEEEESSCC-H--HHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHT-----------TCEEEECCGG----
T ss_pred CCCcEEEEEEeCCc-H--HHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHc-----------CCCEEEECcc----
Confidence 56789999988874 3 356777788776 68876665432 222 222222 3666544320
Q ss_pred CCCCCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcc-hHHHHHHHhCCceEEEecc
Q 012587 79 HPRTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS-RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~-~~~~~A~~lgiP~v~~~~~ 141 (460)
. ..+ . ....+.+.+.++++ +||+||.-.+.. ....+-+.....++-++++
T Consensus 82 ~---~~~-r-------~~~~~~~~~~l~~~--~~Dliv~agy~~IL~~~~l~~~~~~~iNiHpS 132 (229)
T 3auf_A 82 A---YPS-R-------TAFDAALAERLQAY--GVDLVCLAGYMRLVRGPMLTAFPNRILNIHPS 132 (229)
T ss_dssp G---SSS-H-------HHHHHHHHHHHHHT--TCSEEEESSCCSCCCHHHHHHSTTCEEEEESS
T ss_pred c---ccc-h-------hhccHHHHHHHHhc--CCCEEEEcChhHhCCHHHHhhccCCEEEEccC
Confidence 0 000 0 11224556777777 999999876633 4455556666677777665
|
| >4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=86.90 E-value=2.9 Score=39.73 Aligned_cols=36 Identities=19% Similarity=0.065 Sum_probs=28.3
Q ss_pred CCCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCc
Q 012587 3 KQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (460)
Q Consensus 3 ~~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~ 43 (460)
+|+++||+++..+.. .+.+++++++.|++|.++..+
T Consensus 4 m~~~~~ilI~g~g~~-----~~~~~~a~~~~G~~~v~v~~~ 39 (403)
T 4dim_A 4 MYDNKRLLILGAGRG-----QLGLYKAAKELGIHTIAGTMP 39 (403)
T ss_dssp --CCCEEEEECCCGG-----GHHHHHHHHHHTCEEEEEECS
T ss_pred ccCCCEEEEECCcHh-----HHHHHHHHHHCCCEEEEEcCC
Confidence 356789999988764 367999999999999999763
|
| >3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0 | Back alignment and structure |
|---|
Probab=85.85 E-value=1.2 Score=38.22 Aligned_cols=45 Identities=16% Similarity=0.078 Sum_probs=37.8
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhh
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIR 51 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~ 51 (460)
++||++...|+.|-++ ...|.+.|+++|++|.++.++.-...+..
T Consensus 4 ~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~fi~~ 48 (209)
T 3zqu_A 4 PERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQLVMAT 48 (209)
T ss_dssp CSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHHHHHH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHHHHHH
Confidence 4699999999988887 89999999999999999999554444444
|
| >2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A | Back alignment and structure |
|---|
Probab=85.39 E-value=4.7 Score=37.20 Aligned_cols=100 Identities=8% Similarity=-0.017 Sum_probs=55.2
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccc-------hhHHhhccccccccccCCCCceEEecCCCCCCCC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHY-------YDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDH 79 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (460)
|||+|+ |--+-...+.++|.++||+|..+.+... ....++.. ++.+...+. +...
T Consensus 23 mrIvf~-----G~~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~~~~~v~~~A~~~-----------gIpv~~~~~-~~~~- 84 (329)
T 2bw0_A 23 MKIAVI-----GQSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKADPLGLEAEKD-----------GVPVFKYSR-WRAK- 84 (329)
T ss_dssp CEEEEE-----CCHHHHHHHHHHHHHTTCEEEEEEECCCCSSCCCHHHHHHHHH-----------TCCEEECSC-CEET-
T ss_pred CEEEEE-----cCcHHHHHHHHHHHHCCCeEEEEEeCCCcCCCCCHHHHHHHHc-----------CCCEEecCc-cccc-
Confidence 799999 2223344567899999999976665211 11222222 244443321 1000
Q ss_pred CCCCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcc-hHHHHHHHhCCceEEEecc
Q 012587 80 PRTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS-RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~-~~~~~A~~lgiP~v~~~~~ 141 (460)
....+.+.+.++++ +||++|.-.+.. ....+-+.....++-++++
T Consensus 85 ---------------~~~~~~~~~~l~~~--~~Dliv~a~y~~ilp~~il~~~~~g~iNiHpS 130 (329)
T 2bw0_A 85 ---------------GQALPDVVAKYQAL--GAELNVLPFCSQFIPMEIISAPRHGSIIYHPS 130 (329)
T ss_dssp ---------------TEECHHHHHHHHTT--CCSEEEESSCSSCCCHHHHTCSTTCEEEEESS
T ss_pred ---------------ccccHHHHHHHHhc--CCCEEEEeehhhhCCHHHHhhCcCCEEEEcCC
Confidence 01224455667777 999999876633 3344444455567777765
|
| >1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A* | Back alignment and structure |
|---|
Probab=85.05 E-value=1.4 Score=34.95 Aligned_cols=47 Identities=11% Similarity=0.078 Sum_probs=39.2
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhc
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRH 52 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~ 52 (460)
..||++.+.++.+|-....-++..|..+|++|.+++..-..+.+.+.
T Consensus 3 ~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~~p~e~~v~~ 49 (137)
T 1ccw_A 3 KKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSPQELFIKA 49 (137)
T ss_dssp CCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEECHHHHHHH
T ss_pred CCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHH
Confidence 45999999999999999999999999999999988764445555443
|
| >2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A | Back alignment and structure |
|---|
Probab=84.94 E-value=2.7 Score=37.06 Aligned_cols=112 Identities=12% Similarity=0.153 Sum_probs=61.9
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCCCC-C
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPD-K 85 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 85 (460)
||||+..=-+. |.--+.+|+++|++.| +|+++.+.....-. |..... ...+++..+.. ..+ ... .
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~L~~~g-~V~VVAP~~~~Sg~----g~aiTl---~~Pl~~~~~~~----~~~-~v~~G 67 (254)
T 2v4n_A 2 MRILLSNDDGV-HAPGIQTLAKALREFA-DVQVVAPDRNRSGA----SNSLTL---ESSLRTFTFDN----GDI-AVQMG 67 (254)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTC----TTCCCC---SSCCEEEECTT----SCE-EEETC
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhCC-cEEEEeeCCCCcCc----cCCcCC---CCCeEEEEeCC----CCe-EECCC
Confidence 58887766554 4444788999999886 99999985542222 222222 22245544421 111 112 2
Q ss_pred hHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCC----------cc---hHHHHHHHhCCceEEEecc
Q 012587 86 FPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGY----------MS---RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 86 ~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~----------~~---~~~~~A~~lgiP~v~~~~~ 141 (460)
...-|-.+. +..++ ..+||+||+... ++ .+..-|..+|||.|.++..
T Consensus 68 TPaDCV~la------l~~ll---~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~ 127 (254)
T 2v4n_A 68 TPTDCVYLG------VNALM---RPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLN 127 (254)
T ss_dssp CHHHHHHHH------HHTTS---SSCCSEEEEEEEESCCCGGGGGGCHHHHHHHTTTTSSSCEEEEEES
T ss_pred CHHHHHHHH------Hhhcc---CCCCCEeeeCCcCCCCCCCCeeccHHHHHHHHHHhcCCCeEEEecC
Confidence 232333222 12233 238999997532 22 3444455799999998763
|
| >3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=84.08 E-value=6.1 Score=33.84 Aligned_cols=106 Identities=8% Similarity=0.058 Sum_probs=61.5
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhC--CCeEEEEeCcc-chh--HHhhccccccccccCCCCceEEecCCCCCCCC
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGHA--GIKITFLNTEH-YYD--RVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDH 79 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~r--GH~Vt~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (460)
+|+||+++..|+..- +.++.++|.+. +|+|..+.+.. ... ..++.. ++.+..++. ..
T Consensus 2 ~m~ki~vl~sG~g~~---~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~-----------gIp~~~~~~----~~ 63 (212)
T 3av3_A 2 HMKRLAVFASGSGTN---FQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARE-----------NVPAFVFSP----KD 63 (212)
T ss_dssp CCEEEEEECCSSCHH---HHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHT-----------TCCEEECCG----GG
T ss_pred CCcEEEEEEECCcHH---HHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHc-----------CCCEEEeCc----cc
Confidence 367999998887432 55666778776 78997666532 222 112222 355554431 00
Q ss_pred CCCCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcc-hHHHHHHHhCCceEEEecc
Q 012587 80 PRTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS-RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~-~~~~~A~~lgiP~v~~~~~ 141 (460)
..+ . ....+.+.+.++++ +||+||.-.+.. ....+-+.....++-++++
T Consensus 64 ---~~~-~-------~~~~~~~~~~l~~~--~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 113 (212)
T 3av3_A 64 ---YPS-K-------AAFESEILRELKGR--QIDWIALAGYMRLIGPTLLSAYEGKIVNIHPS 113 (212)
T ss_dssp ---SSS-H-------HHHHHHHHHHHHHT--TCCEEEESSCCSCCCHHHHHHTTTCEEEEESS
T ss_pred ---ccc-h-------hhhHHHHHHHHHhc--CCCEEEEchhhhhCCHHHHhhhcCCEEEEecC
Confidence 001 0 01124456677777 999999876643 4455556666677777665
|
| >3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A* | Back alignment and structure |
|---|
Probab=83.80 E-value=22 Score=31.22 Aligned_cols=120 Identities=14% Similarity=0.131 Sum_probs=68.5
Q ss_pred CCcEEEEEcC-CCCCCHHHHHHHHHHHHhCCCeEEEEeC------c--cchhHHhhccccccccccCCC-CceEEecCCC
Q 012587 5 DHVHVAILPL-PAVGHVNSMLNLAELLGHAGIKITFLNT------E--HYYDRVIRHSSDAFSRYMQIP-GFQFKTLTDG 74 (460)
Q Consensus 5 ~~~~il~~~~-~~~Gh~~p~l~La~~L~~rGH~Vt~~~~------~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 74 (460)
+|..|+|... ..-|-..-++.|++.|+++|++|.++=+ + .....+.+..+ .+ ..+...+..
T Consensus 25 ~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fKPv~~g~~~~~~D~~~~~~~~g--------~~~~~~~~~~~~- 95 (251)
T 3fgn_A 25 HMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCKPVQTGTARGDDDLAEVGRLAG--------VTQLAGLARYPQ- 95 (251)
T ss_dssp SCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEEEEECCGGGTCCHHHHHHHHHC--------CCEEEEEEECSS-
T ss_pred CCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEeeeecCCCCCCHHHHHHHHHcC--------CCCCCCCeeECC-
Confidence 3334444444 3788999999999999999999999842 1 11222222222 00 011111111
Q ss_pred CCCCCCCCCCChHHHHHHHHh---hCcHHHHHHHHcCCCCccEEEEcCCc----------chHHHHHHHhCCceEEEecc
Q 012587 75 LPRDHPRTPDKFPELVDSLNC---ATPPLLKEMVSDSKSPVNCIITDGYM----------SRAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~pD~vv~D~~~----------~~~~~~A~~lgiP~v~~~~~ 141 (460)
...+. .-..+.. ...+.+.+.++++..+.|+||.|.-. .....+|+.++.|+|.+...
T Consensus 96 --------p~sP~-~aa~~~~~~~~~~~~i~~~~~~l~~~~D~vlIEGagGl~~pl~~~~~~~adla~~l~~pVILV~~~ 166 (251)
T 3fgn_A 96 --------PMAPA-AAAEHAGMALPARDQIVRLIADLDRPGRLTLVEGAGGLLVELAEPGVTLRDVAVDVAAAALVVVTA 166 (251)
T ss_dssp --------SSCHH-HHHHHTTCCCCCHHHHHHHHHTTCCTTCEEEEECSSSTTCEEETTTEEHHHHHHHTTCEEEEEECS
T ss_pred --------CCChH-HHHHHcCCCCCCHHHHHHHHHHHHhcCCEEEEECCCCCcCCcCcccchHHHHHHHcCCCEEEEEcC
Confidence 00110 1001110 12355677777665689999988731 24567899999999998876
Q ss_pred h
Q 012587 142 S 142 (460)
Q Consensus 142 ~ 142 (460)
.
T Consensus 167 ~ 167 (251)
T 3fgn_A 167 D 167 (251)
T ss_dssp S
T ss_pred C
Confidence 4
|
| >3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A* | Back alignment and structure |
|---|
Probab=83.64 E-value=3.9 Score=37.89 Aligned_cols=41 Identities=20% Similarity=0.199 Sum_probs=34.9
Q ss_pred CCCcEEEEEcC-CCCCCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 012587 4 QDHVHVAILPL-PAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (460)
Q Consensus 4 ~~~~~il~~~~-~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (460)
+++++|+|++. |+-|-..-..++|..|+++|++|.++....
T Consensus 13 ~~~~~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D~ 54 (334)
T 3iqw_A 13 QRSLRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTDP 54 (334)
T ss_dssp CTTCCEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECCS
T ss_pred CCCeEEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 34567877765 799999999999999999999999999854
|
| >3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=83.16 E-value=11 Score=34.55 Aligned_cols=35 Identities=11% Similarity=0.063 Sum_probs=25.0
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCc
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~ 43 (460)
|++|||+|+-.|. ..+..-++|.++||+|..+.+.
T Consensus 5 ~~~mrivf~Gt~~-----fa~~~L~~L~~~~~~v~~Vvt~ 39 (318)
T 3q0i_A 5 SQSLRIVFAGTPD-----FAARHLAALLSSEHEIIAVYTQ 39 (318)
T ss_dssp --CCEEEEECCSH-----HHHHHHHHHHTSSSEEEEEECC
T ss_pred ccCCEEEEEecCH-----HHHHHHHHHHHCCCcEEEEEcC
Confidence 5568999997763 3455668888899999877663
|
| >3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP} | Back alignment and structure |
|---|
Probab=82.89 E-value=0.78 Score=43.36 Aligned_cols=37 Identities=14% Similarity=0.174 Sum_probs=32.1
Q ss_pred CcEEEEEcC-CCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 6 HVHVAILPL-PAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 6 ~~~il~~~~-~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
||+|++++. |+-|-..-...+|..|+++|++|.++..
T Consensus 1 M~~i~~~~gkGG~GKTt~a~~la~~la~~g~~vllvd~ 38 (374)
T 3igf_A 1 MALILTFLGKSGVARTKIAIAAAKLLASQGKRVLLAGL 38 (374)
T ss_dssp -CEEEEEECSBHHHHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHHCCCCeEEEeC
Confidence 578887776 6888888899999999999999999987
|
| >1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1 | Back alignment and structure |
|---|
Probab=82.85 E-value=2.2 Score=33.75 Aligned_cols=49 Identities=12% Similarity=0.141 Sum_probs=32.0
Q ss_pred CCCCCCcEEEEEcC-C-CCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHH
Q 012587 1 MEKQDHVHVAILPL-P-AVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRV 49 (460)
Q Consensus 1 ~~~~~~~~il~~~~-~-~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~ 49 (460)
|.+...||++++-. | ..--+.-.+-++..|+++||+|++.+++...+-+
T Consensus 1 ~~~~~~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAlkLl 51 (157)
T 1kjn_A 1 MKTESTGKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLV 51 (157)
T ss_dssp -----CCEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHH
T ss_pred CccccceeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHHHhhe
Confidence 44445578766644 4 4444455788999999999999999996644443
|
| >2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=82.48 E-value=2.2 Score=35.94 Aligned_cols=45 Identities=11% Similarity=0.109 Sum_probs=36.7
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhh
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIR 51 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~ 51 (460)
|+||++...|+.|-. =...+.+.|+++|++|.++.++.-.+.+..
T Consensus 1 mk~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~~i~~ 45 (189)
T 2ejb_A 1 MQKIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRNAKVVLKE 45 (189)
T ss_dssp CCEEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHHHHHHHHH
T ss_pred CCEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChhHHHHhhH
Confidence 359999999998854 578999999999999999999555445544
|
| >2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824} | Back alignment and structure |
|---|
Probab=82.44 E-value=5.5 Score=33.63 Aligned_cols=109 Identities=9% Similarity=0.042 Sum_probs=64.3
Q ss_pred CCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCC-------------CCCC-----CC
Q 012587 18 GHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTD-------------GLPR-----DH 79 (460)
Q Consensus 18 Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~-----~~ 79 (460)
|.+.-.+.+++.+ +.|.+|.+..+ .++..+.+... +.+..++- .... +.
T Consensus 36 ~~l~~~v~~a~~~-~~~~dVIISRG-gta~~lr~~~~-----------iPVV~I~~s~~Dil~al~~a~~~~~kIavvg~ 102 (196)
T 2q5c_A 36 ASLTRASKIAFGL-QDEVDAIISRG-ATSDYIKKSVS-----------IPSISIKVTRFDTMRAVYNAKRFGNELALIAY 102 (196)
T ss_dssp CCHHHHHHHHHHH-TTTCSEEEEEH-HHHHHHHTTCS-----------SCEEEECCCHHHHHHHHHHHGGGCSEEEEEEE
T ss_pred CCHHHHHHHHHHh-cCCCeEEEECC-hHHHHHHHhCC-----------CCEEEEcCCHhHHHHHHHHHHhhCCcEEEEeC
Confidence 5667777888888 88888776665 77777777543 22322220 0000 00
Q ss_pred CCCCCChHHHHHHHHhh-------CcHHHHHHHHcC-CCCccEEEEcCCcchHHHHHHHhCCceEEEecch
Q 012587 80 PRTPDKFPELVDSLNCA-------TPPLLKEMVSDS-KSPVNCIITDGYMSRAIDAAREVGVSIIYFRTIS 142 (460)
Q Consensus 80 ~~~~~~~~~~~~~~~~~-------~~~~l~~~~~~~-~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~ 142 (460)
.........+...+... ..+.+++.++++ ..+.|+||.|.. +..+|+++|+|.+.+.+..
T Consensus 103 ~~~~~~~~~~~~ll~~~i~~~~~~~~~e~~~~i~~l~~~G~~vvVG~~~---~~~~A~~~Gl~~vli~sg~ 170 (196)
T 2q5c_A 103 KHSIVDKHEIEAMLGVKIKEFLFSSEDEITTLISKVKTENIKIVVSGKT---VTDEAIKQGLYGETINSGE 170 (196)
T ss_dssp SSCSSCHHHHHHHHTCEEEEEEECSGGGHHHHHHHHHHTTCCEEEECHH---HHHHHHHTTCEEEECCCCH
T ss_pred cchhhHHHHHHHHhCCceEEEEeCCHHHHHHHHHHHHHCCCeEEECCHH---HHHHHHHcCCcEEEEecCH
Confidence 01222333333322211 134445555555 459999999854 6899999999999988753
|
| >3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A* | Back alignment and structure |
|---|
Probab=82.37 E-value=8.4 Score=33.73 Aligned_cols=39 Identities=18% Similarity=0.238 Sum_probs=31.3
Q ss_pred CcEEEEEcC--CCCCCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 012587 6 HVHVAILPL--PAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (460)
Q Consensus 6 ~~~il~~~~--~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (460)
|+||+.+.. |+-|-..-...||..|+++|++|.++-...
T Consensus 1 M~~vi~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 1 MARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp -CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 456655544 688889999999999999999999998644
|
| >4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A* | Back alignment and structure |
|---|
Probab=82.21 E-value=6.4 Score=33.01 Aligned_cols=37 Identities=22% Similarity=0.392 Sum_probs=30.0
Q ss_pred EEEEEc--CCCCCCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 012587 8 HVAILP--LPAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (460)
Q Consensus 8 ~il~~~--~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (460)
||+.+. -|+-|--.-...||..|+++|++|.++-...
T Consensus 2 ~vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~ 40 (206)
T 4dzz_A 2 KVISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDP 40 (206)
T ss_dssp EEEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCC
Confidence 444443 3688999999999999999999999998643
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=82.00 E-value=8.5 Score=37.68 Aligned_cols=112 Identities=13% Similarity=0.068 Sum_probs=68.7
Q ss_pred CceeeeecCh---Hhhhcccccccccc--cCChh-HHHHHHHhC---CceecccccccchhhHHHHHhhhceeeeecCCc
Q 012587 328 RGCIAGWVPQ---EEVLAHSAVGGFLT--HCGWN-STLESIVAG---MPMICWPSFADQQINSRFVGEVWKLGLDIKDLC 398 (460)
Q Consensus 328 n~~~~~~vp~---~~il~~~~~~~~I~--HGG~g-s~~eal~~G---vP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~ 398 (460)
.|.+...+|+ ..++..+++ ++++ .=|+| +..||+++| .|+|+--+.+ .+..+. .-|+.+ ...
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv-~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~~l~---~~allV-nP~ 423 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL-LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAEVLG---EYCRSV-NPF 423 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE-EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THHHHG---GGSEEE-CTT
T ss_pred CEEEeCCCCHHHHHHHHHhccE-EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHHHhC---CCEEEE-CCC
Confidence 4666788886 456667887 3333 45887 568999996 5665543322 222221 136666 557
Q ss_pred chHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHhh
Q 012587 399 DRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKMM 453 (460)
Q Consensus 399 ~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~~ 453 (460)
+.+.++++|.++|++...+-+++.+++.+.+++ -....-++++++.|...
T Consensus 424 D~~~lA~AI~~aL~m~~~er~~r~~~~~~~V~~-----~d~~~W~~~fl~~L~~~ 473 (496)
T 3t5t_A 424 DLVEQAEAISAALAAGPRQRAEAAARRRDAARP-----WTLEAWVQAQLDGLAAD 473 (496)
T ss_dssp BHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTT-----CBHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-----CCHHHHHHHHHHHHhhc
Confidence 899999999999984113344455555555443 23345567788777654
|
| >1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1 | Back alignment and structure |
|---|
Probab=81.29 E-value=1.9 Score=36.49 Aligned_cols=45 Identities=9% Similarity=0.042 Sum_probs=37.2
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhC-CCeEEEEeCccchhHHhhc
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHA-GIKITFLNTEHYYDRVIRH 52 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~r-GH~Vt~~~~~~~~~~~~~~ 52 (460)
|||++...|+.|-+. ...+.+.|+++ |++|.++.++.-.+.+...
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~~fi~~~ 46 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAKTTIELE 46 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHHHHHHHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHHHHhHHH
Confidence 589999999987766 89999999999 9999999996655555444
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 460 | ||||
| d2pq6a1 | 473 | c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransfe | 9e-85 | |
| d2vcha1 | 471 | c.87.1.10 (A:6-476) Hydroquinone glucosyltransfera | 4e-77 | |
| d2c1xa1 | 450 | c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-gluc | 1e-76 | |
| d2acva1 | 461 | c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transf | 1e-67 | |
| d1rrva_ | 401 | c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Am | 2e-34 | |
| d1iira_ | 401 | c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycol | 2e-30 | |
| d1pn3a_ | 391 | c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA | 9e-24 |
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} Length = 473 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Score = 266 bits (679), Expect = 9e-85
Identities = 157/475 (33%), Positives = 247/475 (52%), Gaps = 35/475 (7%)
Query: 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQ 67
HV ++P P GH+N + LA+LL G ITF+NTE+ + R+++ F
Sbjct: 3 HVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDG--FTDFN 60
Query: 68 FKTLTDGLP--RDHPRTPDKFPELVDSLNCATPPLLKEMV-----SDSKSPVNCIITDGY 120
F+++ DGL P L S+ E++ S + PV C+++D
Sbjct: 61 FESIPDGLTPMEGDGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCC 120
Query: 121 MSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELPIKGF-------------- 166
MS I AA E + + + + SAC+ + ++ G +P K
Sbjct: 121 MSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERGIIPFKDESYLTNGCLETKVDW 180
Query: 167 ------LRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRN 220
R +D+ F R +P D L F ++LNTF +LE +++ + +
Sbjct: 181 IPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVINALSS 240
Query: 221 HSCPNIYSIGPLNAHLKV--RIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIA 278
P+IY IGPL + LK +I + S+LWK D C+ WL+ + SV+YV+FGS
Sbjct: 241 T-IPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTT 299
Query: 279 VMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQE 338
VM+ +QL+EF +GL + KKSFLW+IRPD G E +RG IA W PQ+
Sbjct: 300 VMTPEQLLEFAWGLANCKKSFLWIIRPD--LVIGGSVIFSSEFTNEIADRGLIASWCPQD 357
Query: 339 EVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLC 398
+VL H ++GGFLTHCGWNST ESI AG+PM+CWP FADQ + RF+ W++G++I
Sbjct: 358 KVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTNV 417
Query: 399 DRNIVEKAVNDLMV-ERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKM 452
R + K +N+++ ++ ++ + A + A+++ GG SY NL++++ D+ +
Sbjct: 418 KREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDVLL 472
|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 471 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 246 bits (627), Expect = 4e-77
Identities = 120/477 (25%), Positives = 195/477 (40%), Gaps = 39/477 (8%)
Query: 8 HVAILPLPAVGHVNSMLNLA-ELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGF 66
HVAI+P P +GH+ ++ A L+ G+ +TF+ + +
Sbjct: 3 HVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLP----SSI 58
Query: 67 QFKTLTDGLPRDHPRTPDKFPELVDSLNCATPPL--LKEMVSDSKSPVNCIITDGYMSRA 124
L D + + ++ + P L + + + ++ D + + A
Sbjct: 59 SSVFLPPVDLTDLSSSTRIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDA 118
Query: 125 IDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELPIKGFLRCRDLPSFCRV------ 178
D A E V F +A F +P + + + LP V
Sbjct: 119 FDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCEFRELTEPLMLPGCVPVAGKDFL 178
Query: 179 ---NDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPNIYSIGPLNAH 235
D D T+ A+G+++NTF +LE + ++ + + P+
Sbjct: 179 DPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEP-GLDKPPVYPVGPL 237
Query: 236 LKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHS 295
+ + + C+ WLD QP SV+YVSFGS ++ +QL E GL S
Sbjct: 238 VN------IGKQEAKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADS 291
Query: 296 KKSFLWVIRPDLISGK----------DGENQIPEELLEATKERGCI-AGWVPQEEVLAHS 344
++ FLWVIR D +P LE TK+RG + W PQ +VLAH
Sbjct: 292 EQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHP 351
Query: 345 AVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCD----R 400
+ GGFLTHCGWNSTLES+V+G+P+I WP +A+Q++N+ + E + L + D R
Sbjct: 352 STGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVRR 411
Query: 401 NIVEKAVNDLMV-ERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKMMSSQ 456
V + V LM E + + A + + G+S L + K +
Sbjct: 412 EEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWKAHKKE 468
|
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} Length = 450 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Score = 244 bits (623), Expect = 1e-76
Identities = 109/464 (23%), Positives = 198/464 (42%), Gaps = 43/464 (9%)
Query: 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFL--NTEHYYDRVIRHSSDAFSRYMQIPG 65
HVA+L P H +L + L A F +T + S
Sbjct: 3 HVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQ-----CN 57
Query: 66 FQFKTLTDGLPRDHPRTPDKFPELVDSLNCATPPL---LKEMVSDSKSPVNCIITDGYMS 122
+ ++DG+P + ++ A + V+++ PV+C++ D ++
Sbjct: 58 IKSYDISDGVPEGYVFAGRPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIW 117
Query: 123 RAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELPIKGFLRC------------- 169
A D A E+GV+ + F T + + I +I + +
Sbjct: 118 FAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVSGIQGREDELLNFIPGMSKVR 177
Query: 170 -RDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPNIYS 228
RDL + + R ++ A + +N+FE+L+ + + +++ +
Sbjct: 178 FRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSK-LKTYLN 236
Query: 229 IGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEF 288
IGP N + + C+ WL ++ SV+Y+SFG++ +++
Sbjct: 237 IGPFNLI----------TPPPVVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVAL 286
Query: 289 YYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGG 348
L S+ F+W +R +PE LE T+ G + W PQ EVLAH AVG
Sbjct: 287 SEALEASRVPFIWSLRDK------ARVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGA 340
Query: 349 FLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIK-DLCDRNIVEKAV 407
F+THCGWNS ES+ G+P+IC P F DQ++N R V +V ++G+ I+ + ++ +
Sbjct: 341 FVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFTKSGLMSCF 400
Query: 408 NDLMV-ERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDI 450
+ ++ E+ ++ E+ + A ++V GSS N LV+ +
Sbjct: 401 DQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLV 444
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} Length = 461 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Score = 221 bits (563), Expect = 1e-67
Identities = 112/467 (23%), Positives = 188/467 (40%), Gaps = 38/467 (8%)
Query: 8 HVAILPLPAVGHVNSMLNLAELL---GHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIP 64
+ +P P +GH+ S L A+LL + IT + + P
Sbjct: 9 ELIFIPAPGIGHLASALEFAKLLTNHDK-NLYITVFCIKFPGMPFADSYIKSVLASQ--P 65
Query: 65 GFQFKTLTDGLPRDHPRTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSRA 124
Q L + P ++ L P + + + + V ++ D +
Sbjct: 66 QIQLIDLPEVEPPPQELLKSPEFYILTFLESLIPHVKATIKTILSNKVVGLVLDFFCVSM 125
Query: 125 IDAAREVGVSIIYFRTISACAFWSFHCIPDII----------DAGELPIKGFLRCRDLPS 174
ID E G+ F T + + + D L I G
Sbjct: 126 IDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEEVFDDSDRDHQLLNIPGISNQVPSNV 185
Query: 175 FCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNH--SCPNIYSIGPL 232
D + + + G+I+NTF DLE + + +H P IY++GPL
Sbjct: 186 LPDACFNKDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDEKIPPIYAVGPL 245
Query: 233 NAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVS-FGSIAVMSRDQLIEFYYG 291
+ + + WLD+QP +SV+++ Q+ E G
Sbjct: 246 L------DLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALG 299
Query: 292 LVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLT 351
L HS FLW + +G + +G I GW PQ EVLAH A+GGF++
Sbjct: 300 LKHSGVRFLWSNSAEKKVFPEGF-----LEWMELEGKGMICGWAPQVEVLAHKAIGGFVS 354
Query: 352 HCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIK-------DLCDRNIVE 404
HCGWNS LES+ G+P++ WP +A+QQ+N+ + + W +GL ++ D+ +E
Sbjct: 355 HCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIE 414
Query: 405 KAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIK 451
K + DLM ++ + M +++ +V GGSS ++ +L++DI
Sbjct: 415 KGLKDLM-DKDSIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDIT 460
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} Length = 401 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Score = 130 bits (328), Expect = 2e-34
Identities = 55/427 (12%), Positives = 115/427 (26%), Gaps = 48/427 (11%)
Query: 9 VAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQF 68
V + G V + LA+ L G++ +R+ + Q
Sbjct: 3 VLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEVGVPHVP----VGLPQH 58
Query: 69 KTLTDGLPRDHPRTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAA 128
L +G+P P + + + V + + A
Sbjct: 59 MMLQEGMPPPPPEEEQRLAAMTVE---MQFDAVPGAAEGCA-AVVAVGDLAAATGVRSVA 114
Query: 129 REVGVSIIYFRTISACAFWSFHCIPDIIDAGELPIKGFLRCRDLPSFCRVNDPMDPHLLL 188
++G + +F ++ + + + +P D P +R R D P L
Sbjct: 115 EKLG--LPFFYSVPSPVYLASPHLPPAYDEPTTPGVTDIRVLWEERAARFADRYGPTLNR 172
Query: 189 FARETRLS--AHADGLILNTFEDLEGPILSQIRNHSCPNIYSIGPLNAHLKVRIPEKTYS 246
E L G L + + + L
Sbjct: 173 RRAEIGLPPVEDVFGYGHGERPLLAADPVLAPLQPDVDAVQTGAWL-------------- 218
Query: 247 SSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPD 306
S + A+L +++ FGS + + + ++ + + R
Sbjct: 219 LSDERPLPPELEAFLAAG--SPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVILSRGW 276
Query: 307 LISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGM 366
E +L ++ V + + V + H + + AG+
Sbjct: 277 -----------TELVLPDDRDDCFAIDEVNFQALFRR--VAAVIHHGSAGTEHVATRAGV 323
Query: 367 PMICWPSFADQQINSRFVGEVWKLG--LDIKDLCDRNIVEKAVNDLMVERKEEFMESADR 424
P + P DQ + V +G D + A+ ++ E A+
Sbjct: 324 PQLVIPRNTDQPYFAGRV-AALGIGVAHDGPTP-TFESLSAALTTVL---APETRARAEA 378
Query: 425 MANLAKK 431
+A +
Sbjct: 379 VAGMVLT 385
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} Length = 401 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Score = 119 bits (299), Expect = 2e-30
Identities = 52/427 (12%), Positives = 100/427 (23%), Gaps = 49/427 (11%)
Query: 9 VAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQF 68
V + + G ++ LA + G + +R+ G
Sbjct: 3 VLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEV------------GVPH 50
Query: 69 KTLTDGLPRDHPRTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAA 128
+ R E V + + + ++T G ++ AI
Sbjct: 51 VPVGPSARAPIQRAKPLTAEDVRRFTTEAIATQFDEIPAAAEGCAAVVTTGLLAAAIGVR 110
Query: 129 REVGVSIIYFRTISACAFWSFHCIPDIIDAGELPIKGFLRCRDLPSFCRVNDPMDPHLL- 187
V+ + L D+P+ N+
Sbjct: 111 S---VAEKLGIPYFYAFHCPSYVPSPYYPPPPLGEPSTQDTIDIPAQWERNNQSAYQRYG 167
Query: 188 -LFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPNIYSIGPLNAHLKVRIPEKTYS 246
L + TF + P + + PL + +
Sbjct: 168 GLLNSHRDAIGLPPVEDIFTFGYTDHPWV--------AADPVLAPLQPTDLDAVQTGAWI 219
Query: 247 SSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPD 306
+ A+LD P D + + + +
Sbjct: 220 LPDERPLSPELAAFLDAGPP---PVYLGFGSLGAPADAVRVAIDAIRAHGRRVILSRGWA 276
Query: 307 LISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGM 366
+ +L G V + + V + H G +T + AG
Sbjct: 277 ------------DLVLPDDGADCFAIGEVNHQVLFGR--VAAVIHHGGAGTTHVAARAGA 322
Query: 367 PMICWPSFADQQINSRFVGEVWKLG--LDIKDLCDRNIVEKAVNDLMVERKEEFMESADR 424
P I P ADQ + V +G D + + A+ + E A
Sbjct: 323 PQILLPQMADQPYYAGRV-AELGVGVAHDGPIP-TFDSLSAALATAL---TPETHARATA 377
Query: 425 MANLAKK 431
+A +
Sbjct: 378 VAGTIRT 384
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} Length = 391 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Score = 100 bits (249), Expect = 9e-24
Identities = 56/428 (13%), Positives = 105/428 (24%), Gaps = 62/428 (14%)
Query: 9 VAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQF 68
V I + G ++ LA L G Y +R +P
Sbjct: 3 VLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEVG---------VPMVPV 53
Query: 69 KTLTDGLPRDHPRTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAA 128
R+ P E+V + + + V A
Sbjct: 54 GRAVRAGAREPGELPPGAAEVVTEVVAEWFDKVPAAIEG-CDAVVTTGLLPAAVAVRSMA 112
Query: 129 REVGVSIIYFRTISACAFWSFHCIPDIIDAGELPIKGFLRCRDLPSFCRVNDPMDPHLLL 188
++G+ Y + + D VN L
Sbjct: 113 EKLGIPYRYTVLSPDHLPSEQSQAER---------DMYNQGADRLFGDAVNSHRASIGLP 163
Query: 189 FARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPNIYSIGPLNAHLKVRIPEKTYSSS 248
+ D L L + G
Sbjct: 164 PVEHLYDYGYTDQPWLAADPVLS------PLRPTDLGTVQTGAWIL-------------P 204
Query: 249 SLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLI 308
+ A+L +YV FGS + + + V + + + R
Sbjct: 205 DERPLSAELEAFLAAGST--PVYVGFGSSSRPATADAAKMAIKAVRASGRRIVLSRGW-- 260
Query: 309 SGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPM 368
+ +L + G V +E+ V + H +TL ++ AG+P
Sbjct: 261 ---------ADLVLPDDGADCFVVGEVNLQELFGR--VAAAIHHDSAGTTLLAMRAGIPQ 309
Query: 369 ICWPSFADQQINSRFVGE-VWKLG----LDIKDLCDRNIVEKAVNDLMVERKEEFMESAD 423
I D + + + V +LG +D + + A++ + E A
Sbjct: 310 IVVRRVVDNVVEQAYHADRVAELGVGVAVDGPVP-TIDSLSAALDTAL---APEIRARAT 365
Query: 424 RMANLAKK 431
+A+ +
Sbjct: 366 TVADTIRA 373
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 460 | |||
| d2c1xa1 | 450 | UDP glucose:flavonoid 3-o-glucosyltransferase {Gra | 100.0 | |
| d2pq6a1 | 473 | (Iso)flavonoid glycosyltransferase {Medicago trunc | 100.0 | |
| d2acva1 | 461 | Triterpene UDP-glucosyl transferase UGT71G1 {Medic | 100.0 | |
| d2vcha1 | 471 | Hydroquinone glucosyltransferase {Thale cress (Ara | 100.0 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 100.0 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 100.0 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 100.0 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 99.94 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 98.99 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 98.87 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 98.8 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 98.72 | |
| d1f6da_ | 376 | UDP-N-acetylglucosamine 2-epimerase {Escherichia c | 98.51 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 98.48 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 97.72 | |
| d1pswa_ | 348 | ADP-heptose LPS heptosyltransferase II {Escherichi | 97.49 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 97.05 | |
| d1j9ja_ | 247 | SurE homolog TM1662 {Thermotoga maritima [TaxId: 2 | 94.06 | |
| d1ccwa_ | 137 | Glutamate mutase, small subunit {Clostridium cochl | 91.7 | |
| d1gsaa1 | 122 | Prokaryotic glutathione synthetase, N-terminal dom | 89.54 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 89.41 | |
| d1xmpa_ | 155 | N5-CAIR mutase (phosphoribosylaminoimidazole carbo | 88.75 | |
| d1l5xa_ | 276 | SurE homolog PAE2908 (SurE-alpha) {Archaeon Pyroba | 87.2 | |
| d1uana_ | 227 | Hypothetical protein TT1542 {Thermus thermophilus | 86.84 | |
| d1u11a_ | 159 | N5-CAIR mutase (phosphoribosylaminoimidazole carbo | 86.64 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 86.06 | |
| d2bw0a2 | 203 | 10-formyltetrahydrofolate dehydrogenase domain 1 { | 85.45 | |
| d1gsoa2 | 105 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 85.36 | |
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 83.64 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 83.43 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 82.45 | |
| d1o4va_ | 169 | N5-CAIR mutase (phosphoribosylaminoimidazole carbo | 80.85 | |
| d7reqa2 | 168 | Methylmalonyl-CoA mutase alpha subunit, C-terminal | 80.81 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 80.1 |
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Probab=100.00 E-value=1.1e-55 Score=439.42 Aligned_cols=425 Identities=25% Similarity=0.434 Sum_probs=314.2
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCCCCCh
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPDKF 86 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (460)
.||+|+|+|+.||++|+++||++|++|||+|||++.... ....+.....+.. ....+.+..++++++..........
T Consensus 2 ~hvl~~p~P~~gH~~p~l~la~~L~~rGH~Vt~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (450)
T d2c1xa1 2 PHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTS-QSNASIFHDSMHT--MQCNIKSYDISDGVPEGYVFAGRPQ 78 (450)
T ss_dssp CEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECH-HHHHHHC---------CTTEEEEECCCCCCTTCCCCCCTT
T ss_pred CEEEEECchhHhHHHHHHHHHHHHHHCCCcEEEEEccCc-cchhhhhcccccc--cCCCceeeecCCCCCcchhhccchH
Confidence 399999999999999999999999999999999985332 2222222211111 0335788888887776543222222
Q ss_pred ---HHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEEEecchhHHHHHHhhccccccCCCCCC
Q 012587 87 ---PELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELPI 163 (460)
Q Consensus 87 ---~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~ 163 (460)
..++......+.+.+.+.+.....+||+||+|.+..++..+|+++|+|++.+.+.+.........++........+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~~~~p~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (450)
T d2c1xa1 79 EDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVSG 158 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHhCCCCCeEEEECCccHHHHHHHHHhCCCEEEEecCchhhhhhhhcccccccccCCCc
Confidence 22222222223333344443324699999999999999999999999999999988776554433332211111111
Q ss_pred -----CC---------CccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCCCceeEe
Q 012587 164 -----KG---------FLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPNIYSI 229 (460)
Q Consensus 164 -----~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~~~~~~v 229 (460)
.. +.+................+...................+++.++..+.++.+++ .+|+...+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~p~~~~~ 237 (450)
T d2c1xa1 159 IQGREDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKS-KLKTYLNI 237 (450)
T ss_dssp CTTCTTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHH-HSSCEEEC
T ss_pred cccccccccccCCcccchhHhhhhhhhhcccchHHHHHHHHHHHhhhhcccccccccHHhhhhhhhhhccc-cCCceeec
Confidence 00 1122222222222333445555555555666778888999999999999999998 88999999
Q ss_pred CccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEccCCCC
Q 012587 230 GPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLIS 309 (460)
Q Consensus 230 G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~ 309 (460)
|++........+ ..++++..|+...+.+++||+++||......+++..++.++++.+.++||+.....
T Consensus 238 g~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~v~~s~gs~~~~~~~~~~~~~~~~~~~~~~vl~~~~~~~-- 305 (450)
T d2c1xa1 238 GPFNLITPPPVV----------PNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDKA-- 305 (450)
T ss_dssp CCHHHHC-------------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGGG--
T ss_pred CCccccCCCCCC----------cchhhhccccccCCccceeeecccccccCCHHHHHHHHHHHHhcCCeEEEEECCCc--
Confidence 988665443221 23456778998888899999999999999999999999999999999999986432
Q ss_pred CCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHHHHHhhhc
Q 012587 310 GKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWK 389 (460)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G 389 (460)
...+++++..+.++|+.+..|+||.++|.|+++++||||||.||++||+++|||||++|+++||+.||+|+++++|
T Consensus 306 ----~~~l~~~~~~~~~~nv~~~~~~pq~~lL~hp~~~~fItHGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G 381 (450)
T d2c1xa1 306 ----RVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLE 381 (450)
T ss_dssp ----GGGSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSC
T ss_pred ----cccCChhhhhhccccccccccCChHhhhccCceeEEEccCCccHHHHHHHcCCCEEecccccchHHHHHHHHHHcC
Confidence 2256777777788999999999999999999999999999999999999999999999999999999999964579
Q ss_pred eeeeec-CCcchHHHHHHHHHHHhHhHHHHH---HHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHhh
Q 012587 390 LGLDIK-DLCDRNIVEKAVNDLMVERKEEFM---ESADRMANLAKKSVNKGGSSYCNLDRLVNDIKMM 453 (460)
Q Consensus 390 ~g~~~~-~~~~~~~l~~~i~~~l~~~~~~~~---~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~~ 453 (460)
+|+.++ ..+|+++|+++|+++|+| ++|| +|+++|++..++++.+||++.++++.++|.+..+
T Consensus 382 ~G~~l~~~~~t~~~l~~ai~~vL~d--~~y~~~~~r~~~l~~~~~~a~~~~gss~~~~~~~~e~v~r~ 447 (450)
T d2c1xa1 382 IGVRIEGGVFTKSGLMSCFDQILSQ--EKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSKP 447 (450)
T ss_dssp CEEECGGGSCCHHHHHHHHHHHHHS--HHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHTSC
T ss_pred cEEEecCCCcCHHHHHHHHHHHhcC--cHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhhh
Confidence 999998 789999999999999998 8776 6777777788888999999999999999998766
|
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Probab=100.00 E-value=1.1e-54 Score=434.16 Aligned_cols=439 Identities=36% Similarity=0.709 Sum_probs=318.9
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhcccc-ccccccCCCCceEEecCCCCCCCC--CCCC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSD-AFSRYMQIPGFQFKTLTDGLPRDH--PRTP 83 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 83 (460)
.||+++|+|+.||++|+++||++|++|||+|||++++.+.+.+.+.... .... ...+++..++++..... ....
T Consensus 2 ~hvl~~p~p~~gH~~P~~~lA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 78 (473)
T d2pq6a1 2 PHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDG---FTDFNFESIPDGLTPMEGDGDVS 78 (473)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC---------------CEEEEEECCCCC---------
T ss_pred CEEEEECchhhhHHHHHHHHHHHHHHCCCeEEEEeCcchHhHHhhccCcccccC---CCCcceeecCCCCcccccccchh
Confidence 4999999999999999999999999999999999998888887765542 2112 33577788877655432 2233
Q ss_pred CChHHHHHHHHhhCcHHHHHHHHc----C-CCCccEEEEcCCcchHHHHHHHhCCceEEEecchhHHHHHHhhccccccC
Q 012587 84 DKFPELVDSLNCATPPLLKEMVSD----S-KSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDA 158 (460)
Q Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~~----~-~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 158 (460)
......+..+.......+.+.... . ...+|+|+.|....++..+|+++|+|++.+.+............+.....
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~a~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 158 (473)
T d2pq6a1 79 QDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVER 158 (473)
T ss_dssp CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHHHT
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeEEEecCcchhhHHHHHHhCCCceeeccccchhhhhhhcccccccc
Confidence 455555555554444433332222 2 35789999999999999999999999999998877655444433322222
Q ss_pred CCCCCCC--------------------CccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHH
Q 012587 159 GELPIKG--------------------FLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQI 218 (460)
Q Consensus 159 ~~~p~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~ 218 (460)
...+... ..+...+..+...........................+.+++.+.+......+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (473)
T d2pq6a1 159 GIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVINAL 238 (473)
T ss_dssp TCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHHHHHHH
T ss_pred cCCCccccccccccccccccccCCCccccchhhhhhhhhhcchhHHHHHHHHHHHHHHHhhhcccccchhhhhHhHHHHH
Confidence 2111110 11222222333333445556666666667777888999999998888877777
Q ss_pred hhcCCCceeEeCccccccccCCCcccc-C-CCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCC
Q 012587 219 RNHSCPNIYSIGPLNAHLKVRIPEKTY-S-SSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSK 296 (460)
Q Consensus 219 ~~~~~~~~~~vG~~~~~~~~~~~~~~~-~-~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~ 296 (460)
.. ..+.....++.............. . .......+.+...|+...+...++|+++||....+......++.++++++
T Consensus 239 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~gs~~~~~~~~~~~~~~~~~~~~ 317 (473)
T d2pq6a1 239 SS-TIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGLANCK 317 (473)
T ss_dssp HT-TCTTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHHHHHTT
T ss_pred Hh-cCCcccccCCccccCCCCCCccccccCCcccccccHHHHHHhhhcCCCceeeeccCccccccHHHHHHHHHHHHhcC
Confidence 76 667777777654332211100000 0 00112334566778877788899999999999999999999999999999
Q ss_pred CcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceeccccccc
Q 012587 297 KSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFAD 376 (460)
Q Consensus 297 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~D 376 (460)
.+++|+++..... +....+++++....++|+++.+|+||.+||.|+.+++||||||.||++||+++|||||++|++.|
T Consensus 318 ~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~Nv~~~~~~Pq~~lL~hp~~~~fItHGG~~s~~Eal~~GVP~lv~P~~~D 395 (473)
T d2pq6a1 318 KSFLWIIRPDLVI--GGSVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFAD 395 (473)
T ss_dssp CEEEEECCGGGST--TTGGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTT
T ss_pred CeEEEEEccCCcc--cccccCcccchhhccCceEEeeeCCHHHHhcCCcCcEEEecCCccHHHHHHHcCCCEEeccchhh
Confidence 9999998754333 22224667666678899999999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHhhhceeeeecCCcchHHHHHHHHHHHhHh-HHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHH
Q 012587 377 QQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVER-KEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIK 451 (460)
Q Consensus 377 Q~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~ 451 (460)
|+.||+|+++++|+|+.++.++|+++|+++|+++|+|. +.+||+||++|++++++++++||++.+++++|||++.
T Consensus 396 Q~~na~rv~~~~G~G~~l~~~~t~~~l~~ai~~vl~d~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~i~~~~ 471 (473)
T d2pq6a1 396 QPTDCRFICNEWEIGMEIDTNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDVL 471 (473)
T ss_dssp HHHHHHHHHHTSCCEEECCSSCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHcCeEEeeCCCcCHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Confidence 99999998666799999987899999999999999971 2349999999999999999999999999999999874
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Probab=100.00 E-value=2.5e-52 Score=415.81 Aligned_cols=431 Identities=26% Similarity=0.444 Sum_probs=312.0
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEE--EeCccchhHHhhccc-cccccccCCCCceEEecCCCCCCCCC
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITF--LNTEHYYDRVIRHSS-DAFSRYMQIPGFQFKTLTDGLPRDHP 80 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (460)
+++.||+|+|+|+.||++|+++||++|++|||+|++ ++++.....+.+..+ ..... .+++++..++++.+...
T Consensus 5 ~~~~hil~~p~P~~GH~~P~l~lA~~L~~rGH~V~vt~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~- 80 (461)
T d2acva1 5 NKNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLAS---QPQIQLIDLPEVEPPPQ- 80 (461)
T ss_dssp HHCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCS---CTTEEEEECCCCCCCCG-
T ss_pred CCCCeEEEecChhhhHHHHHHHHHHHHHHCCCCeEEEEEeCCccchhhhhhcccccccC---CCCeeEEECCCCCCchh-
Confidence 456799999999999999999999999999999764 555555444444333 22222 45688898887655432
Q ss_pred CCCCChHHHHHHHHhhCcHHHHHHHHcC-CCCccEEEEcCCcchHHHHHHHhCCceEEEecchhHHHHHHhhccccccCC
Q 012587 81 RTPDKFPELVDSLNCATPPLLKEMVSDS-KSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAG 159 (460)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 159 (460)
.........+..+...+.+.++++++.+ ..++|+|+.|.+..++..+|+.+|+|++.+.+.+........+++......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~d~~~~~~~~~a~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (461)
T d2acva1 81 ELLKSPEFYILTFLESLIPHVKATIKTILSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEE 160 (461)
T ss_dssp GGGGSHHHHHHHHHHHTHHHHHHHHHHHCCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTTC
T ss_pred hhhhcHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEeccchHHHHHHHHhCCCeEEEecccchhhHHhhccccccccc
Confidence 2344555566666666777888888877 578999999999999999999999999999998776655544444332211
Q ss_pred CCCCCCC----ccCCCCCCcc--c----CCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhh--cCCCcee
Q 012587 160 ELPIKGF----LRCRDLPSFC--R----VNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRN--HSCPNIY 227 (460)
Q Consensus 160 ~~p~~~~----~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~--~~~~~~~ 227 (460)
..+.... .......... . .............+........+..+.+++..++......... ..+++++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (461)
T d2acva1 161 VFDDSDRDHQLLNIPGISNQVPSNVLPDACFNKDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDEKIPPIY 240 (461)
T ss_dssp CCCCSSGGGCEECCTTCSSCEEGGGSCHHHHCTTTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHCTTSCCEE
T ss_pred cccccccccccccccccccchhhhhhhhhhhccchhHHHHHHHHHhhhccccccccccccccchhhhhhhhcccCCCCce
Confidence 1111110 0000000000 0 0011222233344444455677788888888777655443333 1447899
Q ss_pred EeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcc-cCCHHHHHHHHHHHhhCCCcEEEEEccC
Q 012587 228 SIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIA-VMSRDQLIEFYYGLVHSKKSFLWVIRPD 306 (460)
Q Consensus 228 ~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~-~~~~~~~~~~~~al~~~~~~~i~~~~~~ 306 (460)
.+||.........+. ......+++..|++......++++++|+.. ....+.+..++.+++..+++++|+....
T Consensus 241 ~~~p~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (461)
T d2acva1 241 AVGPLLDLKGQPNPK------LDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAE 314 (461)
T ss_dssp ECCCCCCSSCCCBTT------BCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCC
T ss_pred eeccccccCCccCCC------ccccCcHHHHHHHhhCCccceeeeeccccccCCCHHHHHHHHHHHHhcCccEEEEeecc
Confidence 999987654422111 111235567789987777888888888766 4567888999999999999999998643
Q ss_pred CCCCCCCCCCCchHHH--HHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHHHH
Q 012587 307 LISGKDGENQIPEELL--EATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFV 384 (460)
Q Consensus 307 ~~~~~~~~~~~~~~~~--~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~ 384 (460)
. ...++++. ...++|+.+..|.||.++|.|+.+++||||||+||++||+++|||||++|+++||+.||+|+
T Consensus 315 ~-------~~~~~~~~~~~~~~~n~~v~~~~pq~~~l~~p~~~~fItHGG~gs~~eAl~~GVP~l~~P~~~DQ~~nA~rl 387 (461)
T d2acva1 315 K-------KVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRL 387 (461)
T ss_dssp G-------GGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHH
T ss_pred c-------ccCCccchhhhccCCCeEEEecCCHHHHHhcccCCEEEecCCccHHHHHHHcCCCEEeCCcccchHHHHHHH
Confidence 2 12344433 23678999999999999998888888999999999999999999999999999999999997
Q ss_pred Hhhhceeeeec-C------CcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHh
Q 012587 385 GEVWKLGLDIK-D------LCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKM 452 (460)
Q Consensus 385 ~e~~G~g~~~~-~------~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~ 452 (460)
+|++|+|+.++ . .+|+++|+++|+++|++ ++.||+||++|++++++++++||+|.+++++|||+|.+
T Consensus 388 ve~~G~G~~l~~~~~~~~~~~t~~~l~~a~~~vl~~-d~~~r~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~~~~ 461 (461)
T d2acva1 388 VKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDK-DSIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDITG 461 (461)
T ss_dssp HHTSCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCT-TCTHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHHC
T ss_pred HHHhCceEEeeccccccCCccCHHHHHHHHHHHhhC-CHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHhcC
Confidence 67889999986 2 28999999999999974 05599999999999999999999999999999999863
|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=3.6e-51 Score=408.59 Aligned_cols=431 Identities=28% Similarity=0.446 Sum_probs=310.0
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHH-hCCCeEEEEeCccchhHHhhccc-cccccccCCCCceEEecCCCCCCCCCCCCCC
Q 012587 8 HVAILPLPAVGHVNSMLNLAELLG-HAGIKITFLNTEHYYDRVIRHSS-DAFSRYMQIPGFQFKTLTDGLPRDHPRTPDK 85 (460)
Q Consensus 8 ~il~~~~~~~Gh~~p~l~La~~L~-~rGH~Vt~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (460)
||+++|+|++||++|+++||++|. +|||+|||++++.+.....+..+ ... ...+....++..... ......+
T Consensus 3 hil~~p~p~~GH~~P~l~La~~L~~~rGH~Vt~v~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~-~~~~~~~ 76 (471)
T d2vcha1 3 HVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSL-----PSSISSVFLPPVDLT-DLSSSTR 76 (471)
T ss_dssp EEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC-C-----CTTEEEEECCCCCCT-TSCTTCC
T ss_pred EEEEECchhHhHHHHHHHHHHHHHHccCCEEEEEeCCCcchhhhhhcccccC-----CCCcceeecCccccc-ccccccc
Confidence 999999999999999999999996 48999999998776665555444 211 113455555532222 2224455
Q ss_pred hHHHHHHHHhhCcHHHHHHHHcC---CCCccEEEEcCCcchHHHHHHHhCCceEEEecchhHHHHHHhhcccccc-----
Q 012587 86 FPELVDSLNCATPPLLKEMVSDS---KSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIID----- 157 (460)
Q Consensus 86 ~~~~~~~~~~~~~~~l~~~~~~~---~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~----- 157 (460)
....+..+...+...+++..... ...+|+||.|....++..+|+.+|+|++.+.+.+........+.+....
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (471)
T d2vcha1 77 IESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCE 156 (471)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHCCSC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeccchHHHHHHHHhCCCcccccccchhhHHHhhcCcccccccCcc
Confidence 66666666666666666555554 3689999999999999999999999999999877655443332222110
Q ss_pred --CCCCCCC--CCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCC---CceeEeC
Q 012587 158 --AGELPIK--GFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSC---PNIYSIG 230 (460)
Q Consensus 158 --~~~~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~---~~~~~vG 230 (460)
....+.. ......................................+.+.+...+...+..... .. +++..++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 235 (471)
T d2vcha1 157 FRELTEPLMLPGCVPVAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQE-PGLDKPPVYPVG 235 (471)
T ss_dssp GGGCSSCBCCTTCCCBCGGGSCGGGSCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHS-CCTTCCCEEECC
T ss_pred ccccccccccccccccccccccccccccchHHHHHHHHHHHhhcccccccchhHHHHHHHHHhhccc-ccCCCCCccCcc
Confidence 0001100 00111111111222233444455555555555667778888887777666655554 33 4566666
Q ss_pred ccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEccCCCCC
Q 012587 231 PLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISG 310 (460)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~ 310 (460)
+........ ......+++.+|++.....+++|+++|+........+..+..+++..+.+++|..+......
T Consensus 236 ~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (471)
T d2vcha1 236 PLVNIGKQE---------AKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGIA 306 (471)
T ss_dssp CCCCCSCSC---------C-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCSST
T ss_pred cccccCccc---------cccccchhHHHHHHhcCCccccccccccccCCCHHHHHHHHHHHHhhcCCeEEEeccccccc
Confidence 665433321 11234567889999888899999999999988999899999999999999999987543220
Q ss_pred ----------CCCCCCCchHHHH-HhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceecccccccchh
Q 012587 311 ----------KDGENQIPEELLE-ATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQI 379 (460)
Q Consensus 311 ----------~~~~~~~~~~~~~-~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~ 379 (460)
......+|+++.. ..++|+++.+|+||.+||.|+.+++||||||+||++||+++|||||++|+++||+.
T Consensus 307 ~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~w~Pq~~lL~hp~~~~fVtHGG~gS~~EAl~~GvP~v~~P~~~DQ~~ 386 (471)
T d2vcha1 307 NSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKM 386 (471)
T ss_dssp TTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHH
T ss_pred cccccccccccchhhhCCchhhhhccCCCeeecccCCHHHHhcCccCCEEEecCCccHHHHHHHcCCCEEEcccccccHH
Confidence 0011235665543 35689999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHhhhceeeeec-C---CcchHHHHHHHHHHHhH-hHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHhhc
Q 012587 380 NSRFVGEVWKLGLDIK-D---LCDRNIVEKAVNDLMVE-RKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKMMS 454 (460)
Q Consensus 380 na~~~~e~~G~g~~~~-~---~~~~~~l~~~i~~~l~~-~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~~~ 454 (460)
||+|++|++|+|+.+. . .+|+++|+++|+++|+| +|..||+||+++++++++++++||+|.++++++|+..+.+.
T Consensus 387 nA~rv~e~lG~Gv~l~~~~~~~~t~~~l~~ai~~vl~~~~~~~~r~ra~~l~e~~~~a~~~gG~s~~~~~~~~~~~~~~~ 466 (471)
T d2vcha1 387 NAVLLSEDIRAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWKAHK 466 (471)
T ss_dssp HHHHHHHTTCCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHheeEEEEecCCCCcCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhh
Confidence 9999977789999996 2 48999999999999986 23469999999999999999999999999999999987764
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=100.00 E-value=6.6e-44 Score=348.33 Aligned_cols=361 Identities=13% Similarity=0.061 Sum_probs=239.7
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCC--CCCCCCCC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLP--RDHPRTPD 84 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 84 (460)
|||+|+++|++||++|+++||++|++|||+|||++++.+.+.+.+. +++|.+++.... ........
T Consensus 1 mrIl~~~~gt~Ghv~P~l~lA~~L~~rGh~V~~~t~~~~~~~v~~~------------g~~~~~~~~~~~~~~~~~~~~~ 68 (401)
T d1rrva_ 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEV------------GVPHVPVGLPQHMMLQEGMPPP 68 (401)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH------------TCCEEECSCCGGGCCCTTSCCC
T ss_pred CeEEEECCCChhHHHHHHHHHHHHHHCCCEEEEEEChhhHHHHHHC------------CCeEEEcCCcHHhhhccccccc
Confidence 7999999999999999999999999999999999997776666554 377777653211 11111122
Q ss_pred ChHHH---HHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcc-hHHHHHHHhCCceEEEecchhHHHHHHhhccccccCCC
Q 012587 85 KFPEL---VDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS-RAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGE 160 (460)
Q Consensus 85 ~~~~~---~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~-~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~ 160 (460)
..... .........+.+.+.++. .++|+++.|.... ++..+|+.+|+|++...+.+...... +.+.......
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~a~~~~~p~~~~~~~~~~~~~~--~~~~~~~~~~ 144 (401)
T d1rrva_ 69 PPEEEQRLAAMTVEMQFDAVPGAAEG--CAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLASP--HLPPAYDEPT 144 (401)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTT--CSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCCS--SSCCCBCSCC
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhc--CCCeEEEEcCchhhHHHHHHHHhCCCcccccccchhhccc--cccccccccc
Confidence 22222 222222233333444444 4999999986544 67889999999999887765432110 1010000000
Q ss_pred CCCCCCccCCCCCCcccCC-CCCChH-------HHHHHHHh--------hhhcCCCEEEEcChhhhchhHHHHHhhcCCC
Q 012587 161 LPIKGFLRCRDLPSFCRVN-DPMDPH-------LLLFARET--------RLSAHADGLILNTFEDLEGPILSQIRNHSCP 224 (460)
Q Consensus 161 ~p~~~~~~~~~~~~~~~~~-~~~~~~-------~~~~~~~~--------~~~~~~~~~l~~~~~~le~p~~~~~~~~~~~ 224 (460)
.+.. ....... ...... ........ ..........++..+.+.. ++ ..+
T Consensus 145 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~-~~~ 209 (401)
T d1rrva_ 145 TPGV--------TDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGERPLLAADPVLAP------LQ-PDV 209 (401)
T ss_dssp CTTC--------CCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCSSCEECSCTTTSC------CC-SSC
T ss_pred cccc--------chhhhhHHHHHHHHHhhhHHHHHHHHHHhCCcccchhhhhccccchhhcchhhhcc------cC-CCC
Confidence 0000 0000000 000000 00000000 0001111112222222221 22 446
Q ss_pred ceeEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCH-HHHHHHHHHHhhCCCcEEEEE
Q 012587 225 NIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSR-DQLIEFYYGLVHSKKSFLWVI 303 (460)
Q Consensus 225 ~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~-~~~~~~~~al~~~~~~~i~~~ 303 (460)
+.+.+|++......+ .+.++.+|++. ++++||+++||...... ...+.++.+++..+..++|..
T Consensus 210 ~~~~~g~~~~~~~~~-------------~~~~~~~~l~~--~~~~v~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (401)
T d1rrva_ 210 DAVQTGAWLLSDERP-------------LPPELEAFLAA--GSPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVILSR 274 (401)
T ss_dssp CCEECCCCCCCCCCC-------------CCHHHHHHHHS--SSCCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CeEEECCCccccccc-------------CCHHHHHhhcc--CCCeEEEECCccccCCHHHHHHHHHHHHhhcCCeEEEec
Confidence 788999988655432 35568889986 56799999999886555 456678899999999988877
Q ss_pred ccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHHH
Q 012587 304 RPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRF 383 (460)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~ 383 (460)
+... ..... .++|+.+.+|+||.++|+++++ ||||||+||++||+++|||+|++|+..||+.||++
T Consensus 275 ~~~~-------~~~~~-----~~~~v~~~~~~p~~~ll~~~~~--~I~hgG~~t~~Eal~~GvP~l~~P~~~DQ~~na~~ 340 (401)
T d1rrva_ 275 GWTE-------LVLPD-----DRDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGR 340 (401)
T ss_dssp TTTT-------CCCSC-----CCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSBTHHHHHHH
T ss_pred cccc-------ccccc-----CCCCEEEEeccCcHHHhhhccE--EEecCCchHHHHHHHhCCCEEEecccccHHHHHHH
Confidence 5321 11122 5689999999999999999887 99999999999999999999999999999999999
Q ss_pred HHhhhceeeeec-CCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHH
Q 012587 384 VGEVWKLGLDIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKK 431 (460)
Q Consensus 384 ~~e~~G~g~~~~-~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~ 431 (460)
+ +++|+|+.++ .+++++.|+++|+++|+ ++|+++|+++++++++
T Consensus 341 v-~~~G~g~~l~~~~~~~~~L~~ai~~vl~---~~~r~~a~~~~~~~~~ 385 (401)
T d1rrva_ 341 V-AALGIGVAHDGPTPTFESLSAALTTVLA---PETRARAEAVAGMVLT 385 (401)
T ss_dssp H-HHHTSEEECSSSCCCHHHHHHHHHHHTS---HHHHHHHHHHTTTCCC
T ss_pred H-HHCCCEEEcCcCCCCHHHHHHHHHHHhC---HHHHHHHHHHHHHHhh
Confidence 9 5899999998 67999999999999996 6799999999988764
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=100.00 E-value=1.3e-43 Score=345.67 Aligned_cols=381 Identities=15% Similarity=0.154 Sum_probs=246.8
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCC-CCC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRT-PDK 85 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 85 (460)
|||+|+++|++||++|+++||++|+++||+|+|++++...+.+.+. +++|.+++.......... ...
T Consensus 1 mkil~~~~gt~Gh~~P~lala~~L~~~Gh~V~~~~~~~~~~~v~~~------------g~~~~~i~~~~~~~~~~~~~~~ 68 (401)
T d1iira_ 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEV------------GVPHVPVGPSARAPIQRAKPLT 68 (401)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT------------TCCEEECCC-------CCSCCC
T ss_pred CEEEEECCCChhHHHHHHHHHHHHHHCCCEEEEEeCcchHHHHHHc------------CCeEEECCcchhhhhhccccch
Confidence 7999999999999999999999999999999999998777776543 488888875433322111 222
Q ss_pred hHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcc---hHHHHHHHhCCceEEEecchhHHHHHHhhccccccCCCCC
Q 012587 86 FPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS---RAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELP 162 (460)
Q Consensus 86 ~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~---~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p 162 (460)
...+...........++.+.... ...|.++.+.+.. ++..+|+.+++|.+...+.+........ +.. ....+
T Consensus 69 ~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~ 143 (401)
T d1iira_ 69 AEDVRRFTTEAIATQFDEIPAAA-EGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPSPYY--PPP--PLGEP 143 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT-TTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCCSSS--CCC--C----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-hcCcceEEeecchhHHHHHHHHHHhccccccccccccccccccc--ccc--ccccc
Confidence 23222222222222223333322 3455555554433 5778999999999988776543211100 000 00000
Q ss_pred CCCCccCCCCCCcccC-CCCCCh----HHHHHHHHh--------hhhcCCCEEEEcChhhhchhHHHHHhhcCCCceeEe
Q 012587 163 IKGFLRCRDLPSFCRV-NDPMDP----HLLLFARET--------RLSAHADGLILNTFEDLEGPILSQIRNHSCPNIYSI 229 (460)
Q Consensus 163 ~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~--------~~~~~~~~~l~~~~~~le~p~~~~~~~~~~~~~~~v 229 (460)
... ........... ...... ......+.. .........++++.+.++++ ++ ..+..+.+
T Consensus 144 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~ 215 (401)
T d1iira_ 144 STQ--DTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTDHPWVAADPVLAPL-----QP-TDLDAVQT 215 (401)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCC-----CC-CSSCCEEC
T ss_pred ccc--chhcchhhhhhhhhHHHHHHHHHHHHHHHHhcCccchhhhhhcccchhhhcccccccCC-----CC-cccccccc
Confidence 000 00000000000 000000 000000000 11123445667777777665 55 66778888
Q ss_pred CccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEccCCCC
Q 012587 230 GPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLIS 309 (460)
Q Consensus 230 G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~ 309 (460)
|++....... .+.....|++. .+++||+++|+.. .....++.+.++++..+.+++|..+....
T Consensus 216 ~~~~~~~~~~-------------~~~~~~~~~~~--~~~~i~~~~~~~~-~~~~~~~~~~~al~~~~~~~~~~~~~~~~- 278 (401)
T d1iira_ 216 GAWILPDERP-------------LSPELAAFLDA--GPPPVYLGFGSLG-APADAVRVAIDAIRAHGRRVILSRGWADL- 278 (401)
T ss_dssp CCCCCCCCCC-------------CCHHHHHHHHT--SSCCEEEECC----CCHHHHHHHHHHHHHTTCCEEECTTCTTC-
T ss_pred cCcccCcccc-------------cCHHHHHhhcc--CCCeEEEccCccc-cchHHHHHHHHHHHHcCCeEEEeccCCcc-
Confidence 8877654432 23345567765 5688999999886 46778889999999999999998753211
Q ss_pred CCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHHHHHhhhc
Q 012587 310 GKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWK 389 (460)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G 389 (460)
.... .++|+++++|+||.++|+|+++ ||||||+||++||+++|||||++|+..||+.||+++ +++|
T Consensus 279 ------~~~~-----~~~nv~~~~~~p~~~~l~~~~~--~V~hgG~~t~~Eal~~GvP~v~~P~~~DQ~~na~~l-~~~G 344 (401)
T d1iira_ 279 ------VLPD-----DGADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRV-AELG 344 (401)
T ss_dssp ------CCSS-----CGGGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH-HHHT
T ss_pred ------cccc-----CCCCEEEEeccCHHHHHhhcCE--EEecCCchHHHHHHHhCCCEEEccccccHHHHHHHH-HHCC
Confidence 1111 4579999999999999999887 999999999999999999999999999999999999 5899
Q ss_pred eeeeec-CCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHH
Q 012587 390 LGLDIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIK 451 (460)
Q Consensus 390 ~g~~~~-~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~ 451 (460)
+|+.++ .++|+++|+++|+++|+ ++|++||+++++++++. |. .++++.++|.+.
T Consensus 345 ~g~~l~~~~~~~~~l~~ai~~~l~---~~~~~~a~~~~~~~~~~----~~-~~aa~~i~~~i~ 399 (401)
T d1iira_ 345 VGVAHDGPIPTFDSLSAALATALT---PETHARATAVAGTIRTD----GA-AVAARLLLDAVS 399 (401)
T ss_dssp SEEECSSSSCCHHHHHHHHHHHTS---HHHHHHHHHHHHHSCSC----HH-HHHHHHHHHHHH
T ss_pred CEEEcCcCCCCHHHHHHHHHHHhC---HHHHHHHHHHHHHHHhc----Ch-HHHHHHHHHHHh
Confidence 999998 68999999999999996 57999999999998863 32 345566665543
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=100.00 E-value=5.1e-43 Score=340.83 Aligned_cols=375 Identities=15% Similarity=0.153 Sum_probs=246.2
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCC---CCCCC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRD---HPRTP 83 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 83 (460)
|||+|++.|+.||++|+++||++|++|||+|||++++.+.+.+.+. ++++.+++...... .....
T Consensus 1 mril~~~~gt~Ghi~P~laLA~~L~~rGh~V~~~~~~~~~~~v~~~------------g~~~~~~~~~~~~~~~~~~~~~ 68 (391)
T d1pn3a_ 1 MRVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEV------------GVPMVPVGRAVRAGAREPGELP 68 (391)
T ss_dssp CEEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH------------TCCEEECSSCSSGGGSCTTCCC
T ss_pred CEEEEEcCCChhHHHHHHHHHHHHHHCCCEEEEEEChhhHhHHHHC------------CCeEEECCccHHHHhhChhhhh
Confidence 7999999999999999999999999999999999998877776654 47888877543321 11111
Q ss_pred CChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcc---hHHHHHHHhCCceEEEecchhHHHHHHhhccccc-cCC
Q 012587 84 DKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS---RAIDAAREVGVSIIYFRTISACAFWSFHCIPDII-DAG 159 (460)
Q Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~---~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~-~~~ 159 (460)
......+..... ..++.+.+.+ .+||+||+|.+.. ++..+|+.+++|++.+.+.+.............. ...
T Consensus 69 ~~~~~~~~~~~~---~~~~~l~~~~-~~~D~vi~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (391)
T d1pn3a_ 69 PGAAEVVTEVVA---EWFDKVPAAI-EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQAERDMYNQG 144 (391)
T ss_dssp TTCGGGHHHHHH---HHHHHHHHHH-TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHH---HHHHHHHHHh-cCCCeEEEcccCchHHHHHHHHHHcCCceEEeeccccccccccccchhhHHHHH
Confidence 222222222222 2222222222 4799999997654 4677899999999998876543321100000000 000
Q ss_pred CCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCCCceeEeCccccccccC
Q 012587 160 ELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPNIYSIGPLNAHLKVR 239 (460)
Q Consensus 160 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~~~~~~vG~~~~~~~~~ 239 (460)
...... ........... .......... ......++...+.++.+ ++ ..++.+.+|+........
T Consensus 145 ~~~~~~-~~~~~~~~~~~-~~~~~~~~~~--------~~~~~~~l~~~~~~~~~-----~~-~~~~~~~~g~~~~~~~~~ 208 (391)
T d1pn3a_ 145 ADRLFG-DAVNSHRASIG-LPPVEHLYDY--------GYTDQPWLAADPVLSPL-----RP-TDLGTVQTGAWILPDERP 208 (391)
T ss_dssp HHHHTH-HHHHHHHHTTS-CCCCCCHHHH--------HHCSSCEECSCTTTSCC-----CT-TCCSCCBCCCCCCCCCCC
T ss_pred HHHHHH-HHHHHHHHHhc-Cccccccccc--------ccccceeeccchhhhcc-----CC-CCCCeeeecCcccCcccc
Confidence 000000 00000000000 0000000000 11112233443333332 33 556788999987654432
Q ss_pred CCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCH-HHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCc
Q 012587 240 IPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSR-DQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIP 318 (460)
Q Consensus 240 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~-~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~ 318 (460)
.+.++..|+.. ++++||+++|+...... .....++.++...+.+++|...... ....
T Consensus 209 -------------~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-------~~~~ 266 (391)
T d1pn3a_ 209 -------------LSAELEAFLAA--GSTPVYVGFGSSSRPATADAAKMAIKAVRASGRRIVLSRGWAD-------LVLP 266 (391)
T ss_dssp -------------CCHHHHHHTTS--SSCCEEEECTTCCSTHHHHHHHHHHHHHHHTTCCEEEECTTTT-------CCCS
T ss_pred -------------CCHHHhhhhcc--CCCeEEEeccccccccHHHHHHHHHHHHHhcCCEEEEeccccc-------cccc
Confidence 34556677764 56789999999887655 4566788999999999888765321 1122
Q ss_pred hHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceeccccccc----chhhHHHHHhhhceeeee
Q 012587 319 EELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFAD----QQINSRFVGEVWKLGLDI 394 (460)
Q Consensus 319 ~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~D----Q~~na~~~~e~~G~g~~~ 394 (460)
. .++|+++.+|+||.++|+++++ ||||||+||++||+++|||+|++|+.+| |+.||+++ ++.|+|+.+
T Consensus 267 ~-----~~~~v~i~~~~p~~~ll~~a~~--~v~hgG~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA~~l-~~~G~g~~l 338 (391)
T d1pn3a_ 267 D-----DGADCFVVGEVNLQELFGRVAA--AIHHDSAGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRV-AELGVGVAV 338 (391)
T ss_dssp S-----CCTTCCEESSCCHHHHHTTSSC--EEEESCHHHHHHHHHHTCCEEEECSSCCBTTBCCHHHHHH-HHHTSEEEE
T ss_pred c-----CCCCEEEecccCHHHHHhhccE--EEecCchHHHHHHHHhCCcEEEeccccCCcchHHHHHHHH-HHCCCEEEc
Confidence 2 4579999999999999999987 9999999999999999999999999888 99999999 589999999
Q ss_pred c-CCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHH
Q 012587 395 K-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIK 451 (460)
Q Consensus 395 ~-~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~ 451 (460)
+ .++|+++|.++|+++|+ ++||+||+++++.+++ .| ..++++.+.+.|.
T Consensus 339 ~~~~~~~~~l~~~i~~~l~---~~~r~~a~~~a~~~~~----~g-~~~aa~~i~~~l~ 388 (391)
T d1pn3a_ 339 DGPVPTIDSLSAALDTALA---PEIRARATTVADTIRA----DG-TTVAAQLLFDAVS 388 (391)
T ss_dssp CCSSCCHHHHHHHHHHHTS---TTHHHHHHHHGGGSCS----CH-HHHHHHHHHHHHH
T ss_pred CcCCCCHHHHHHHHHHHhC---HHHHHHHHHHHHHHHh----cC-HHHHHHHHHHHHH
Confidence 8 68999999999999996 5799999999988764 33 3455555554444
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=99.94 E-value=1.2e-25 Score=214.20 Aligned_cols=335 Identities=14% Similarity=0.091 Sum_probs=196.8
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccch-hHHhhccccccccccCCCCceEEecCCCCCCCCCCCCCC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYY-DRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPDK 85 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (460)
.||+|++.|+.||++|.++|+++|.++||+|+|+++.... ..+.+.. ++.+..++..-.. ...
T Consensus 1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~-----~~~ 64 (351)
T d1f0ka_ 1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKH-----------GIEIDFIRISGLR-----GKG 64 (351)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGG-----------TCEEEECCCCCCT-----TCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeCCcchhhccccc-----------CCcEEEEECCCcC-----CCC
Confidence 3899999876699999999999999999999999874432 2333322 2555555421111 112
Q ss_pred hHHHHHHHHh--hCcHHHHHHHHcCCCCccEEEEcCCc--chHHHHHHHhCCceEEEecchhHHHHHHhhccccccCCCC
Q 012587 86 FPELVDSLNC--ATPPLLKEMVSDSKSPVNCIITDGYM--SRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGEL 161 (460)
Q Consensus 86 ~~~~~~~~~~--~~~~~l~~~~~~~~~~pD~vv~D~~~--~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (460)
....+..... ........++++. +||+++..... ..+...|..+++|++.+.+.......
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~~a~~~~ip~~~~~~~~~~~~~-------------- 128 (351)
T d1f0ka_ 65 IKALIAAPLRIFNAWRQARAIMKAY--KPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGIAGLT-------------- 128 (351)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHHH--CCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSSCCHH--------------
T ss_pred HHHHHHHHHHHHHhHHHHHHHhhcc--ccceeeecccchhhhhhhhhhhcccceeecccccccchh--------------
Confidence 2222111111 1223345666665 99999875433 36777899999999987653211100
Q ss_pred CCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCCCceeEeCccccccccCCC
Q 012587 162 PIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPNIYSIGPLNAHLKVRIP 241 (460)
Q Consensus 162 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~~~~~~vG~~~~~~~~~~~ 241 (460)
.+.. ........... . . .......+|.........
T Consensus 129 ----------------------------~~~~--~~~~~~~~~~~-~-----------~-~~~~~~~~~~~~~~~~~~-- 163 (351)
T d1f0ka_ 129 ----------------------------NKWL--AKIATKVMQAF-P-----------G-AFPNAEVVGNPVRTDVLA-- 163 (351)
T ss_dssp ----------------------------HHHH--TTTCSEEEESS-T-----------T-SSSSCEECCCCCCHHHHT--
T ss_pred ----------------------------HHHh--hhhcceeeccc-c-----------c-cccceeEEcCCccccccc--
Confidence 0000 01122222211 1 0 223344555433221111
Q ss_pred ccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCCC-cEEEEEccCCCCCCCCCCCCch-
Q 012587 242 EKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKK-SFLWVIRPDLISGKDGENQIPE- 319 (460)
Q Consensus 242 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~-~~i~~~~~~~~~~~~~~~~~~~- 319 (460)
....... .....++..+++.+||... ....+.+.+.+..... ...+..... .....
T Consensus 164 -----------~~~~~~~-~~~~~~~~~i~~~~gs~g~--~~~~~~~~~~~~~l~~~~~~i~~~~~--------~~~~~~ 221 (351)
T d1f0ka_ 164 -----------LPLPQQR-LAGREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGK--------GSQQSV 221 (351)
T ss_dssp -----------SCCHHHH-HTTCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCT--------TCHHHH
T ss_pred -----------chhHHhh-hhcccCCcccccccccchh--hhhHHHHHHhhhhhcccceeeeeccc--------cchhhh
Confidence 0111111 1223466778888888763 3333444444444332 223333211 01111
Q ss_pred --HHHHHhcCCceeeeecCh-HhhhcccccccccccCChhHHHHHHHhCCceeccccc---ccchhhHHHHHhhhceeee
Q 012587 320 --ELLEATKERGCIAGWVPQ-EEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSF---ADQQINSRFVGEVWKLGLD 393 (460)
Q Consensus 320 --~~~~~~~~n~~~~~~vp~-~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~---~DQ~~na~~~~e~~G~g~~ 393 (460)
...+....|+.+.+|.++ .++|+.+++ +|||||.+|++|++++|+|+|++|+. .||..||+++ +++|+|+.
T Consensus 222 ~~~~~~~~~~~~~v~~f~~~~~~lm~~adl--~It~~G~~T~~Eal~~g~P~I~iP~~~~~~~Q~~NA~~l-~~~G~~~~ 298 (351)
T d1f0ka_ 222 EQAYAEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPL-EKAGAAKI 298 (351)
T ss_dssp HHHHHHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHH-HHTTSEEE
T ss_pred hhhhcccccccceeeeehhhHHHHHHhCch--hhccccchHHHHHHHhCCceeeeecccCCchHHHHHHHH-HHCCCEEE
Confidence 111224568888899874 778999998 99999999999999999999999975 4899999999 58999999
Q ss_pred ec-CCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHh
Q 012587 394 IK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKM 452 (460)
Q Consensus 394 ~~-~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~ 452 (460)
++ .+++.+.|.++|..+..+ +..++++.+++. . ...+.+.+.+.|++|..
T Consensus 299 ~~~~~~~~e~l~~~l~~l~~~-------~~~~~~~~~~~~-~-~~~~a~~i~~~i~~l~~ 349 (351)
T d1f0ka_ 299 IEQPQLSVDAVANTLAGWSRE-------TLLTMAERARAA-S-IPDATERVANEVSRVAR 349 (351)
T ss_dssp CCGGGCCHHHHHHHHHTCCHH-------HHHHHHHHHHHT-C-CTTHHHHHHHHHHHHHT
T ss_pred echhhCCHHHHHHHHHhhCHH-------HHHHHHHHHHcc-C-CccHHHHHHHHHHHHHh
Confidence 98 688999999999887433 233444444442 1 22335667777777653
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=98.99 E-value=3.1e-08 Score=95.03 Aligned_cols=92 Identities=13% Similarity=0.069 Sum_probs=59.9
Q ss_pred CCceeeeecCh---Hhhhccccccccccc----CChhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecCCcc
Q 012587 327 ERGCIAGWVPQ---EEVLAHSAVGGFLTH----CGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCD 399 (460)
Q Consensus 327 ~n~~~~~~vp~---~~il~~~~~~~~I~H----GG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~ 399 (460)
.++.+.+++|+ ..++..+++ ++.- |...++.||+++|+|+|+.... .....+ +. +.|..+ +.-+
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~adi--~v~~s~~e~~~~~~~Eama~G~Pvi~~~~g----~~~e~i-~~-~~G~~~-~~~d 379 (437)
T d2bisa1 309 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLRDII-TN-ETGILV-KAGD 379 (437)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHTTTCEEEEESCT----THHHHC-CT-TTCEEE-CTTC
T ss_pred cceeccccCcHHHHHHHHhhhcc--ccccccccccchHHHHHHHCCCCEEEeCCC----CcHHhE-EC-CcEEEE-CCCC
Confidence 34455588886 456677886 4432 3456999999999999876433 333344 33 677777 4568
Q ss_pred hHHHHHHHHHHHh-H--hHHHHHHHHHHHHH
Q 012587 400 RNIVEKAVNDLMV-E--RKEEFMESADRMAN 427 (460)
Q Consensus 400 ~~~l~~~i~~~l~-~--~~~~~~~~a~~l~~ 427 (460)
.++|.++|.++|+ | ....+++++++.++
T Consensus 380 ~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~ 410 (437)
T d2bisa1 380 PGELANAILKALELSRSDLSKFRENCKKRAM 410 (437)
T ss_dssp HHHHHHHHHHHHTTTTSCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 9999999999986 4 11234555555443
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=98.87 E-value=1.6e-06 Score=80.32 Aligned_cols=145 Identities=14% Similarity=0.124 Sum_probs=85.9
Q ss_pred CCcEEEEEecCcccCCHHHHHHHHHHHhhCC-----CcEEEEEccCCCCCCCCCCCCchHHHHH--hcCCceeeeecCh-
Q 012587 266 KQSVIYVSFGSIAVMSRDQLIEFYYGLVHSK-----KSFLWVIRPDLISGKDGENQIPEELLEA--TKERGCIAGWVPQ- 337 (460)
Q Consensus 266 ~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~-----~~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~n~~~~~~vp~- 337 (460)
.+..+++..|+.... ..+..++++++.+. ..+++..+++ ....+ ..+.++ ..+++.+.++..+
T Consensus 193 ~~~~~i~~~gr~~~~--Kg~~~li~a~~~l~~~~~~~~~~ii~g~~------~~~~~-~~~~~~~~~~~~v~~~g~~~~~ 263 (370)
T d2iw1a1 193 EQQNLLLQVGSDFGR--KGVDRSIEALASLPESLRHNTLLFVVGQD------KPRKF-EALAEKLGVRSNVHFFSGRNDV 263 (370)
T ss_dssp TTCEEEEEECSCTTT--TTHHHHHHHHHTSCHHHHHTEEEEEESSS------CCHHH-HHHHHHHTCGGGEEEESCCSCH
T ss_pred ccceEEEEEeccccc--cchhhhcccccccccccccceeeeccccc------ccccc-cccccccccccccccccccccc
Confidence 455667788887632 22455566665542 2333433211 11011 111122 2346666666553
Q ss_pred Hhhhccccccccccc--CChhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecCCcchHHHHHHHHHHHhHhH
Q 012587 338 EEVLAHSAVGGFLTH--CGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVERK 415 (460)
Q Consensus 338 ~~il~~~~~~~~I~H--GG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~~~~ 415 (460)
..++..+++-++-++ |-..++.||+++|+|+|+... ......+. .-+.|..+....+.+.|.++|.++++|
T Consensus 264 ~~~~~~adv~v~ps~~E~~~~~~~EAma~G~PvI~s~~----~g~~e~i~-~~~~G~l~~~~~d~~~la~~i~~ll~d-- 336 (370)
T d2iw1a1 264 SELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYIA-DANCGTVIAEPFSQEQLNEVLRKALTQ-- 336 (370)
T ss_dssp HHHHHHCSEEEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHHH-HHTCEEEECSSCCHHHHHHHHHHHHHC--
T ss_pred ccccccccccccccccccccceeeecccCCeeEEEeCC----CChHHHhc-CCCceEEEcCCCCHHHHHHHHHHHHcC--
Confidence 678899998222223 345789999999999998653 33455563 556787665556899999999999997
Q ss_pred HHHHHHHHHHH
Q 012587 416 EEFMESADRMA 426 (460)
Q Consensus 416 ~~~~~~a~~l~ 426 (460)
++.+++..+-+
T Consensus 337 ~~~~~~~~~~a 347 (370)
T d2iw1a1 337 SPLRMAWAENA 347 (370)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 66554443333
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.80 E-value=8.3e-08 Score=93.46 Aligned_cols=135 Identities=10% Similarity=0.025 Sum_probs=82.5
Q ss_pred CCcEEEEEecCccc-CCHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchH---HHHHhcCCceeeeecChH---
Q 012587 266 KQSVIYVSFGSIAV-MSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEE---LLEATKERGCIAGWVPQE--- 338 (460)
Q Consensus 266 ~~~~V~vs~GS~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~---~~~~~~~n~~~~~~vp~~--- 338 (460)
++..+++..|.... ...+.+...+..+.+.+.++++...++ . ..... ...+.++++.+..+.+..
T Consensus 289 ~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~~~~~l~~~G~G~-------~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 360 (477)
T d1rzua_ 289 DGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGD-------V-ALEGALLAAASRHHGRVGVAIGYNEPLSH 360 (477)
T ss_dssp SSSCEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBC-------H-HHHHHHHHHHHHTTTTEEEEESCCHHHHH
T ss_pred CCccEEEEEeeeeecCCcHHHHHHHHHHHhhCCeEEEEecCC-------c-hHHHHHHHHHhhcCCeEEEEcccChhHHH
Confidence 34455677887763 334544444444445677877765321 1 01111 113456788887776643
Q ss_pred hhhcccccccccccC---Chh-HHHHHHHhCCceecccccc--cc---hhhHHHHHhhhceeeeecCCcchHHHHHHHHH
Q 012587 339 EVLAHSAVGGFLTHC---GWN-STLESIVAGMPMICWPSFA--DQ---QINSRFVGEVWKLGLDIKDLCDRNIVEKAVND 409 (460)
Q Consensus 339 ~il~~~~~~~~I~HG---G~g-s~~eal~~GvP~l~~P~~~--DQ---~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~ 409 (460)
.+++.+++ +|.-. |.| +++||+++|+|+|+.-..+ |. ..++... ...+.|..+ ...+.++|.++|.+
T Consensus 361 ~~~~~aD~--~v~PS~~E~fglv~lEAma~G~PvVas~~GG~~E~v~d~~~~~~~-~~~~~G~l~-~~~d~~~la~ai~~ 436 (477)
T d1rzua_ 361 LMQAGCDA--IIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALA-SKAATGVQF-SPVTLDGLKQAIRR 436 (477)
T ss_dssp HHHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHH-TTCCCBEEE-SSCSHHHHHHHHHH
T ss_pred HHHHhCcc--ccCCccccCCCHHHHHHHHcCCCEEEcCCCCCcceeecCCccccc-cCCCceEEe-CCCCHHHHHHHHHH
Confidence 35667776 66655 334 8889999999999866532 22 2233333 244678877 66799999999999
Q ss_pred HHh
Q 012587 410 LMV 412 (460)
Q Consensus 410 ~l~ 412 (460)
+++
T Consensus 437 ~l~ 439 (477)
T d1rzua_ 437 TVR 439 (477)
T ss_dssp HHH
T ss_pred HHh
Confidence 886
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=98.72 E-value=8.7e-08 Score=89.97 Aligned_cols=350 Identities=12% Similarity=0.034 Sum_probs=180.2
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhC-CCeEEEEeCccchhHHhhccccccccccCCCCceEEe-cCCCCCCCCCCC
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGHA-GIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKT-LTDGLPRDHPRT 82 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~r-GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 82 (460)
++|||++++ |++..+.-+.+|.++|.++ +.++.++.+...++...... + ++.+.+ +.-.+.. .
T Consensus 1 ~k~Ki~~v~-GtR~e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~-~---------~~~i~~~~~~~~~~----~ 65 (377)
T d1o6ca_ 1 KKLKVMTVF-GTRPEAIKMAPLVLELKKYPEIDSYVTVTAQHRQMLDQVL-D---------AFHIKPDFDLNIMK----E 65 (377)
T ss_dssp CCEEEEEEE-CSHHHHHHHHHHHHHGGGCTTEEEEEEECCSCGGGTHHHH-H---------HTTCCCSEECCCCC----T
T ss_pred CCceEEEEE-EchHhHHHHHHHHHHHHhCCCCCEEEEEeCCCHHHHHHHH-h---------hcCCCCceeeecCC----C
Confidence 357988887 9999999999999999987 57888888866544222110 0 011110 0000111 1
Q ss_pred CCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEE--EcCCcc-hHHHHHHHhCCceEEEecchhHHHHHHhhccccccCC
Q 012587 83 PDKFPELVDSLNCATPPLLKEMVSDSKSPVNCII--TDGYMS-RAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAG 159 (460)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv--~D~~~~-~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 159 (460)
..+...... .....+.+++.+. +||+|+ .|.+.. ++..+|..++||++-+.-.-... +.
T Consensus 66 ~~~~~~~~~----~~i~~~~~~~~~~--kpD~v~v~GDr~e~la~a~aa~~~~Ipi~HiegG~~s~--------~~---- 127 (377)
T d1o6ca_ 66 RQTLAEITS----NALVRLDELFKDI--KPDIVLVHGDTTTTFAGSLAAFYHQIAVGHVEAGLRTG--------NK---- 127 (377)
T ss_dssp TCCHHHHHH----HHHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCCCCCS--------CT----
T ss_pred CCCHHHHHH----HHHHhhhhhhhhc--ccceeEeeecccccchhhhhhhhccceEEEEecccccc--------cc----
Confidence 122222222 2335667777776 999876 454444 67899999999998865431100 00
Q ss_pred CCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhh-c-CCCceeEeCccccccc
Q 012587 160 ELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRN-H-SCPNIYSIGPLNAHLK 237 (460)
Q Consensus 160 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~-~-~~~~~~~vG~~~~~~~ 237 (460)
. ....+...+. ... .-++..++.+-.. ...+.. . ...+++.||-.....-
T Consensus 128 ~------------------~~~~de~~R~---~is--kls~~hf~~t~~~-----~~~L~~~G~~~~~I~~vG~~~~D~i 179 (377)
T d1o6ca_ 128 Y------------------SPFPEELNRQ---MTG--AIADLHFAPTGQA-----KDNLLKENKKADSIFVTGNTAIDAL 179 (377)
T ss_dssp T------------------TTTTHHHHHH---HHH--HHCSEEEESSHHH-----HHHHHHTTCCGGGEEECCCHHHHHH
T ss_pred c------------------ccCchhhhcc---ccc--cceeEEeecchhh-----hhhhhhhccccceEeeccchhHHHH
Confidence 0 0001112222 222 3345555555332 111122 0 1146888896543311
Q ss_pred cCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCH---HHHHHHHHHHhhCCCcEEEEEccCCCCCCCCC
Q 012587 238 VRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSR---DQLIEFYYGLVHSKKSFLWVIRPDLISGKDGE 314 (460)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~---~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~ 314 (460)
...... ........+ ...++.+++++-....... ..+..+...+..... +.+....+ ..
T Consensus 180 ~~~~~~--------~~~~~~~~~---~~~~~~ilvt~Hr~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~------~~ 241 (377)
T d1o6ca_ 180 NTTVRD--------GYSHPVLDQ---VGEDKMILLTAHRRENLGEPMENMFKAIRRIVGEFED-VQVVYPVH------LN 241 (377)
T ss_dssp HHHCCS--------SCCCSTTTT---TTTSEEEEECC----------HHHHHHHHHHHHHCTT-EEEEEC----------
T ss_pred HHHHHH--------HHhhhhhhh---ccCCceEEEEeccccccccchHHHHHHHHhhcccccc-cccccccc------cc
Confidence 000000 001111112 2245777787654333222 234445555554432 22332211 00
Q ss_pred CCCchHHHH--HhcCCceeeeecCh---HhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHHHHHhhhc
Q 012587 315 NQIPEELLE--ATKERGCIAGWVPQ---EEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWK 389 (460)
Q Consensus 315 ~~~~~~~~~--~~~~n~~~~~~vp~---~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G 389 (460)
...-....+ ...+|+.++..+++ ..+|.+|++ +|+.+|.+ +.||-++|+|.|.+-...|++. + + + .|
T Consensus 242 ~~~~~~~~~~~~~~~ni~~~~~l~~~~fl~llk~s~~--vIgnSss~-i~Ea~~lg~P~Inir~~tERqe-~--~-~-~g 313 (377)
T d1o6ca_ 242 PVVREAAHKHFGDSDRVHLIEPLEVIDFHNFAAKSHF--ILTDSGGV-QEEAPSLGKPVLVLRDTTERPE-G--V-E-AG 313 (377)
T ss_dssp CHHHHHHHHC--CCSSEEECCCCCHHHHHHHHHHCSE--EEEC--CH-HHHGGGGTCCEEEECSCCC----C--T-T-TT
T ss_pred cccchhhhhccccccceEeccccchHHHHHHHhhhhe--eecccchh-HHhhhhhhceEEEeCCCCcCcc-h--h-h-cC
Confidence 000111111 13468888888885 456789997 99999988 6799999999999976666553 2 2 2 35
Q ss_pred eeeeecCCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHH
Q 012587 390 LGLDIKDLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVND 449 (460)
Q Consensus 390 ~g~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 449 (460)
.-+.+ ..+.+.|.+++.+++++ +.+.++......- ...|.++.+-++.++..
T Consensus 314 ~nilv--~~~~~~I~~~i~~~l~~--~~~~~~~~~~~np----YGdG~as~rI~~~L~~~ 365 (377)
T d1o6ca_ 314 TLKLA--GTDEENIYQLAKQLLTD--PDEYKKMSQASNP----YGDGEASRRIVEELLFH 365 (377)
T ss_dssp SSEEE--CSCHHHHHHHHHHHHHC--HHHHHHHHHCCCT----TCCSCHHHHHHHHHHHH
T ss_pred eeEEC--CCCHHHHHHHHHHHHhC--hHHHhhhccCCCC----CCCChHHHHHHHHHHHh
Confidence 44443 35789999999999987 6666655443222 23355555555555443
|
| >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Escherichia coli [TaxId: 562]
Probab=98.51 E-value=4.7e-06 Score=77.69 Aligned_cols=337 Identities=12% Similarity=0.023 Sum_probs=175.3
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhC-CCeEEEEeCccchhHHhhccccccccccCCCCce-EEecCCCCCCCCCCCCC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHA-GIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQ-FKTLTDGLPRDHPRTPD 84 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~r-GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 84 (460)
|||++++ |++..+.-+.+|.++|.+. +.++.++.+...++...+... ..++. -..+. ... ...
T Consensus 1 MKi~~v~-GtR~e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~--------~~~~~~~~~~~--~~~----~~~ 65 (376)
T d1f6da_ 1 MKVLTVF-GTRPEAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLK--------LFSIVPDYDLN--IMQ----PGQ 65 (376)
T ss_dssp CEEEEEE-CSHHHHHHHHHHHHHHHHCTTCEEEEEECCTTGGGGHHHHH--------HTTCCCSEECC--CCS----SSS
T ss_pred CeEEEEE-EhhHhHHHHHHHHHHHHhCCCCCEEEEEcCCCHHHHHHHHH--------hcCCCCCcccc--cCC----CCC
Confidence 6888888 9999999999999999886 689999988665442221100 00010 00010 001 112
Q ss_pred ChHHHHHHHHhhCcHHHHHHHHcCCCCccEEE--EcCCcc-hHHHHHHHhCCceEEEecchhHHHHHHhhccccccCCCC
Q 012587 85 KFPELVDSLNCATPPLLKEMVSDSKSPVNCII--TDGYMS-RAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGEL 161 (460)
Q Consensus 85 ~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv--~D~~~~-~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (460)
+....... ....+.+.+.+. +||+|+ .|.+.. +++.+|..++||++-+.-.-.. ... .
T Consensus 66 ~~~~~~~~----~i~~~~~~~~~~--kPD~v~v~GDr~e~la~a~aa~~~~ipi~HiegG~~s--------~~~----~- 126 (376)
T d1f6da_ 66 GLTEITCR----ILEGLKPILAEF--KPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLRT--------GDL----Y- 126 (376)
T ss_dssp CHHHHHHH----HHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCCC--------SCT----T-
T ss_pred CHHHHHHH----HHHhhHHHHHhc--cCcceeeeccccchhhHHHHHHhhCceEEEEeccccc--------ccc----c-
Confidence 22222222 335566777776 999876 454444 6788899999999987553110 000 0
Q ss_pred CCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCCCceeEeCccccccccCCC
Q 012587 162 PIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPNIYSIGPLNAHLKVRIP 241 (460)
Q Consensus 162 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~~~~~~vG~~~~~~~~~~~ 241 (460)
....+.. .+.... .-+...++.+-..-+ .+-.+-. ...+++.||-.....-....
T Consensus 127 -----------------~~~pde~---~R~~is--kls~~hf~~~~~~~~--~L~~~G~-~~~~I~~vG~~~~D~l~~~~ 181 (376)
T d1f6da_ 127 -----------------SPWPEEA---NRTLTG--HLAMYHFSPTETSRQ--NLLRENV-ADSRIFITGNTVIDALLWVR 181 (376)
T ss_dssp -----------------SSTTHHH---HHHHHH--HTCSEEEESSHHHHH--HHHHTTC-CGGGEEECCCHHHHHHHHHH
T ss_pred -----------------ccCchhh---hhhhhc--cceeEEEeccHHHHh--HHHhcCC-CccccceecCchHHHHHHHH
Confidence 0001111 222222 334555555532211 1111111 22468888965432110000
Q ss_pred ccccCCCCc-cccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHH---HHHhhCCCcEEEEEccCCCCCCCCCCCC
Q 012587 242 EKTYSSSSL-WKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFY---YGLVHSKKSFLWVIRPDLISGKDGENQI 317 (460)
Q Consensus 242 ~~~~~~~~~-~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~---~al~~~~~~~i~~~~~~~~~~~~~~~~~ 317 (460)
+. .... .-....+.+......+++.|+|++=........ ++.+. ..+......+.+....+. . ...
T Consensus 182 ~~---~~~~~~~~~~~~~~~~~~~~~~~~ilvt~H~~~~~~~~-~~~i~~~l~~~~~~~~~~~ii~p~~~-----~-~~~ 251 (376)
T d1f6da_ 182 DQ---VMSSDKLRSELAANYPFIDPDKKMILVTGHRRESFGRG-FEEICHALADIATTHQDIQIVYPVHL-----N-PNV 251 (376)
T ss_dssp HH---TTTCHHHHHHHHTTCTTCCTTSEEEEECCCCBSSCCHH-HHHHHHHHHHHHHHCTTEEEEEECCB-----C-HHH
T ss_pred hh---hhccchhhhhhhccccccCCCCceEEEecccchhhhhh-HHHHHHHHhhhhhhcceeEEeccccc-----c-hhh
Confidence 00 0000 000111111111123578899987654444433 33333 344444444444443210 0 000
Q ss_pred chHHHH--HhcCCceeeeecCh---HhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHHHHHhhhceee
Q 012587 318 PEELLE--ATKERGCIAGWVPQ---EEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGL 392 (460)
Q Consensus 318 ~~~~~~--~~~~n~~~~~~vp~---~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~ 392 (460)
-....+ ....|+.+++-+++ ..+|.+|.+ +|+..|. ..-||-++|+|.|.+-...+|+ .++ + .|.-+
T Consensus 252 ~~~~~~~~~~~~ni~~~~~l~~~~fl~ll~~a~~--vignSss-gi~Ea~~lg~P~Inir~~ter~---~~~-~-~g~~i 323 (376)
T d1f6da_ 252 REPVNRILGHVKNVILIDPQEYLPFVWLMNHAWL--ILTDSGG-IQEEAPSLGKPVLVMRDTTERP---EAV-T-AGTVR 323 (376)
T ss_dssp HHHHHHHHTTCTTEEEECCCCHHHHHHHHHHCSE--EEESSSG-GGGTGGGGTCCEEECSSCCSCH---HHH-H-HTSEE
T ss_pred hhhHhhhhcccccceeeccccHHHHHHHHhhceE--EEecCcc-hHhhHHHhCCCEEEcCCCccCc---cce-e-cCeeE
Confidence 011111 13468888877775 456789997 9988764 3569999999999885555555 355 3 35444
Q ss_pred eecCCcchHHHHHHHHHHHhHhHHHHHHHHHH
Q 012587 393 DIKDLCDRNIVEKAVNDLMVERKEEFMESADR 424 (460)
Q Consensus 393 ~~~~~~~~~~l~~~i~~~l~~~~~~~~~~a~~ 424 (460)
.+ ..+.+.+.+++.+++++ +.+++...+
T Consensus 324 ~v--~~~~~~I~~ai~~~l~~--~~~~~~~~~ 351 (376)
T d1f6da_ 324 LV--GTDKQRIVEEVTRLLKD--ENEYQAMSR 351 (376)
T ss_dssp EC--CSSHHHHHHHHHHHHHC--HHHHHHHHH
T ss_pred EC--CCCHHHHHHHHHHHHhC--hHhhhhhcc
Confidence 43 35889999999999987 555554443
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=98.48 E-value=3.2e-06 Score=78.89 Aligned_cols=326 Identities=13% Similarity=0.070 Sum_probs=177.0
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhC-CCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCCCC
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHA-GIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPD 84 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~r-GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (460)
|.||++ ..|++..+.-+.+|.++|.+. +.++.++.+...++...+... ..++.-.. .+.... ...
T Consensus 2 MkkI~~-v~GtR~e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~--------~~~i~~d~---~l~~~~--~~~ 67 (373)
T d1v4va_ 2 MKRVVL-AFGTRPEATKMAPVYLALRGIPGLKPLVLLTGQHREQLRQALS--------LFGIQEDR---NLDVMQ--ERQ 67 (373)
T ss_dssp CEEEEE-EECSHHHHHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHH--------TTTCCCSE---ECCCCS--SCC
T ss_pred CCeEEE-EEEhhHHHHHHHHHHHHHHhCCCCCEEEEEccCChhhhhCcch--------hcCCCccc---cCCCCC--CCC
Confidence 557764 568889999999999999874 899998888776665433211 11121000 011100 122
Q ss_pred ChHHHHHHHHhhCcHHHHHHHHcCCCCccEEE--EcCCcc-hHHHHHHHhCCceEEEecchhHHHHHHhhccccccCCCC
Q 012587 85 KFPELVDSLNCATPPLLKEMVSDSKSPVNCII--TDGYMS-RAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGEL 161 (460)
Q Consensus 85 ~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv--~D~~~~-~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (460)
+...... .+...+.+++.+. +||+|+ .|.+.. ++..+|..++||.+-+.-.... +
T Consensus 68 s~~~~~~----~~~~~~~~~l~~~--kPD~vlv~GDr~e~la~a~aa~~~~ipi~HiegG~rs--------g-------- 125 (373)
T d1v4va_ 68 ALPDLAA----RILPQAARALKEM--GADYVLVHGDTLTTFAVAWAAFLEGIPVGHVEAGLRS--------G-------- 125 (373)
T ss_dssp CHHHHHH----HHHHHHHHHHHHT--TCSEEEEESSCHHHHHHHHHHHHTTCCEEEETCCCCC--------S--------
T ss_pred CHHHHHH----HHHHHHhhhhhhc--CcccccccccCccchhHHHHHHHhhhhheeecccccc--------c--------
Confidence 3333332 2335667788887 999887 455544 5678899999999986543110 0
Q ss_pred CCCCCccCCCCCCcccCCCCCChHHHHHHH-HhhhhcCCCEEEEcChhhhchhHHHHHhh-c-CCCceeEeCcccccccc
Q 012587 162 PIKGFLRCRDLPSFCRVNDPMDPHLLLFAR-ETRLSAHADGLILNTFEDLEGPILSQIRN-H-SCPNIYSIGPLNAHLKV 238 (460)
Q Consensus 162 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~le~p~~~~~~~-~-~~~~~~~vG~~~~~~~~ 238 (460)
.....+.+...+ ... .-+...++.+-...+ .+-. . ...+++.||-.....-.
T Consensus 126 ------------------~~~~~~~de~~R~~is--kls~~hf~~t~~~~~-----~L~~~Ge~~~~I~~vG~p~~D~i~ 180 (373)
T d1v4va_ 126 ------------------NLKEPFPEEANRRLTD--VLTDLDFAPTPLAKA-----NLLKEGKREEGILVTGQTGVDAVL 180 (373)
T ss_dssp ------------------CTTSSTTHHHHHHHHH--HHCSEEEESSHHHHH-----HHHTTTCCGGGEEECCCHHHHHHH
T ss_pred ------------------ccccCcchhhhhhhhc--cccceeeecchhhhh-----hhhhhcccccceeecccchhhHHH
Confidence 001111111111 111 334555555533211 1121 0 11468888855332110
Q ss_pred CCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCC-HHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCC
Q 012587 239 RIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMS-RDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQI 317 (460)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~-~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~ 317 (460)
....+.........++.+++++-.....+ ...+..++..+......+.+....+ .....
T Consensus 181 --------------~~~~~~~~~~~~~~~~~~lvt~hr~~n~~~~~~~~~~~~~~~~~~~~~~~i~p~~------~~~~~ 240 (373)
T d1v4va_ 181 --------------LAAKLGRLPEGLPEGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVH------LNPVV 240 (373)
T ss_dssp --------------HHHHHCCCCTTCCSSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECC------SCHHH
T ss_pred --------------hhhhhcccccccccccceeEEeccccccchHHHHHHHHHHHhhhcccceeeeeec------ccccc
Confidence 00011111111335678888887554432 2334445555554433333333211 00000
Q ss_pred chHHHH--HhcCCceeeeecCh---HhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHHHHHhhhceee
Q 012587 318 PEELLE--ATKERGCIAGWVPQ---EEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGL 392 (460)
Q Consensus 318 ~~~~~~--~~~~n~~~~~~vp~---~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~ 392 (460)
-....+ ....|+.++..+++ ..+|.+|.+ +|+.+|. .+.||.++|+|.|.+...++.+.- + + .|.-+
T Consensus 241 ~~~~~~~~~~~~n~~~~~~l~~~~~l~ll~~s~~--vignSss-gi~Ea~~lg~P~Inir~~~eRqeg---~-~-~g~nv 312 (373)
T d1v4va_ 241 REAVFPVLKGVRNFVLLDPLEYGSMAALMRASLL--LVTDSGG-LQEEGAALGVPVVVLRNVTERPEG---L-K-AGILK 312 (373)
T ss_dssp HHHHHHHHTTCTTEEEECCCCHHHHHHHHHTEEE--EEESCHH-HHHHHHHTTCCEEECSSSCSCHHH---H-H-HTSEE
T ss_pred hhhhhhhhcccccceeeccchHHHHHHHhhhcee--Eecccch-hhhcchhhcCcEEEeCCCccCHHH---H-h-cCeeE
Confidence 001111 23468888877775 445778886 8888765 456999999999999776666542 3 2 35444
Q ss_pred eecCCcchHHHHHHHHHHHhHhHHHHHHHHHH
Q 012587 393 DIKDLCDRNIVEKAVNDLMVERKEEFMESADR 424 (460)
Q Consensus 393 ~~~~~~~~~~l~~~i~~~l~~~~~~~~~~a~~ 424 (460)
.+ ..+.+.+.+++.+++++ +.++++...
T Consensus 313 lv--~~d~~~I~~~i~~~l~~--~~~~~~~~~ 340 (373)
T d1v4va_ 313 LA--GTDPEGVYRVVKGLLEN--PEELSRMRK 340 (373)
T ss_dssp EC--CSCHHHHHHHHHHHHTC--HHHHHHHHH
T ss_pred Ec--CCCHHHHHHHHHHHHcC--HHHHhhccc
Confidence 33 35899999999999998 777665544
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.72 E-value=5.1e-05 Score=61.71 Aligned_cols=138 Identities=12% Similarity=0.059 Sum_probs=80.6
Q ss_pred EEEecCcccCCHHHHHHHHHHHhhCC-CcEEEEEccCCCCCCCCCCCC---chHHHHHhcCCceeeeecCh---Hhhhcc
Q 012587 271 YVSFGSIAVMSRDQLIEFYYGLVHSK-KSFLWVIRPDLISGKDGENQI---PEELLEATKERGCIAGWVPQ---EEVLAH 343 (460)
Q Consensus 271 ~vs~GS~~~~~~~~~~~~~~al~~~~-~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~n~~~~~~vp~---~~il~~ 343 (460)
|+..|.+.. ..-...++++++.+. .++++ ++... ..... -..+.+...+|+.+.+|+|+ ..++..
T Consensus 15 ~l~iGrl~~--~K~~~~~i~a~~~l~~~~l~i-vg~~~-----~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ 86 (166)
T d2f9fa1 15 WLSVNRIYP--EKRIELQLEVFKKLQDEKLYI-VGWFS-----KGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSR 86 (166)
T ss_dssp EEEECCSSG--GGTHHHHHHHHHHCTTSCEEE-EBCCC-----TTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHH
T ss_pred EEEEecCcc--ccCHHHHHHHHHHhcCCeEEE-EEecc-----cccchhhhhhhhcccccCcEEEeeccccccccccccc
Confidence 456677642 223455566666654 45544 43210 10011 11112224579999999997 456778
Q ss_pred cccccccccC--ChhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecCCcchHHHHHHHHHHHhHhHHHHHHH
Q 012587 344 SAVGGFLTHC--GWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVERKEEFMES 421 (460)
Q Consensus 344 ~~~~~~I~HG--G~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~ 421 (460)
+++-++-+.. ...++.||+++|+|+|+.+..+ ....+ +.-..|...+ .+.+++.+++.++++|. ..++++
T Consensus 87 ad~~i~ps~~e~~~~~~~Ea~~~g~pvi~s~~~~----~~e~i-~~~~~g~~~~--~d~~~~~~~i~~l~~~~-~~~~~~ 158 (166)
T d2f9fa1 87 CKGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGG----FKETV-INEKTGYLVN--ADVNEIIDAMKKVSKNP-DKFKKD 158 (166)
T ss_dssp CSEEEECCSSCCSCHHHHHHHHTTCCEEEESSHH----HHHHC-CBTTTEEEEC--SCHHHHHHHHHHHHHCT-TTTHHH
T ss_pred ccccccccccccccccccccccccccceeecCCc----ceeee-cCCcccccCC--CCHHHHHHHHHHHHhCH-HHHHHH
Confidence 8873333322 2459999999999999986543 22334 2335565442 37899999999999961 235555
Q ss_pred HHH
Q 012587 422 ADR 424 (460)
Q Consensus 422 a~~ 424 (460)
+.+
T Consensus 159 ~~~ 161 (166)
T d2f9fa1 159 CFR 161 (166)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
|
| >d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: ADP-heptose LPS heptosyltransferase II domain: ADP-heptose LPS heptosyltransferase II species: Escherichia coli [TaxId: 562]
Probab=97.49 E-value=0.0082 Score=54.20 Aligned_cols=104 Identities=8% Similarity=-0.035 Sum_probs=69.2
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhC--CCeEEEEeCccchhHHhhccccccccccCCCCce-EEecCCCCCCCCCCCC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHA--GIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQ-FKTLTDGLPRDHPRTP 83 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 83 (460)
||||++-..+.||+.-++++.++|+++ +.+|++++.+.+.+.+ +. .+.++ +..++.. . ..
T Consensus 1 MkILii~~~~iGD~il~~p~i~~Lk~~~P~~~I~~l~~~~~~~l~-~~----------~p~id~v~~~~~~--~----~~ 63 (348)
T d1pswa_ 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLL-SR----------MPEVNEAIPMPLG--H----GA 63 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHH-TT----------CTTEEEEEEC------------
T ss_pred CeEEEEcCCChHHHHHHHHHHHHHHHHCCCCEEEEEEChhHHHHH-hh----------CCCcCEEEEecCc--c----cc
Confidence 799999999999999999999999997 8999999986655544 32 33343 3333211 0 00
Q ss_pred CChHHHHHHHHhhCcHHHHHHHHcC-CCCccEEEEcCCcchHHHHHHHhCCceEEEe
Q 012587 84 DKFPELVDSLNCATPPLLKEMVSDS-KSPVNCIITDGYMSRAIDAAREVGVSIIYFR 139 (460)
Q Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~~~-~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~ 139 (460)
.. ......+.+.+ ..++|+++.-........++...+++.....
T Consensus 64 ~~------------~~~~~~l~~~l~~~~~D~~i~~~~~~~~~~~~~~~~~~~~~~~ 108 (348)
T d1pswa_ 64 LE------------IGERRKLGHSLREKRYDRAYVLPNSFKSALVPLFAGIPHRTGW 108 (348)
T ss_dssp -C------------HHHHHHHHHHTTTTTCSEEEECSCCSGGGHHHHHTTCSEEEEE
T ss_pred ch------------hhhhhhHHHHhhhcccceEeecccccchhhHHHhhcccccccc
Confidence 11 11222333444 3499999976555666777888899987654
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=97.05 E-value=0.0025 Score=52.75 Aligned_cols=77 Identities=12% Similarity=0.058 Sum_probs=53.4
Q ss_pred CCceeeeecCh---Hhhhcccccccccc----cCChhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecCCcc
Q 012587 327 ERGCIAGWVPQ---EEVLAHSAVGGFLT----HCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCD 399 (460)
Q Consensus 327 ~n~~~~~~vp~---~~il~~~~~~~~I~----HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~ 399 (460)
....+..+++. ..++..+++ +|. .|-.+++.||+++|+|+|+.-. ......+ +. +.|..+ ..-+
T Consensus 92 ~~~~~~~~~~~~~l~~~~~~~di--~v~ps~~e~~~~~~~Eam~~G~pvI~~~~----~~~~e~i-~~-~~g~~~-~~~~ 162 (196)
T d2bfwa1 92 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-TN-ETGILV-KAGD 162 (196)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHHHC-CT-TTCEEE-CTTC
T ss_pred eeEEeeeccccccchhccccccc--cccccccccccccchhhhhcCceeeecCC----Cccceee-cC-CceeeE-CCCC
Confidence 34445588885 467788887 663 4446899999999999998532 2222333 32 667766 4568
Q ss_pred hHHHHHHHHHHHh
Q 012587 400 RNIVEKAVNDLMV 412 (460)
Q Consensus 400 ~~~l~~~i~~~l~ 412 (460)
.+++.++|.++++
T Consensus 163 ~~~l~~~i~~~l~ 175 (196)
T d2bfwa1 163 PGELANAILKALE 175 (196)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 8999999999886
|
| >d1j9ja_ c.106.1.1 (A:) SurE homolog TM1662 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: SurE-like superfamily: SurE-like family: SurE-like domain: SurE homolog TM1662 species: Thermotoga maritima [TaxId: 2336]
Probab=94.06 E-value=0.2 Score=42.34 Aligned_cols=116 Identities=10% Similarity=0.087 Sum_probs=62.7
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCCCCCh
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPDKF 86 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (460)
||||+.-=-+. |.--+.+|+++|+ +||+|+++.+.....-. |...+. ...+++..+...-... .......
T Consensus 1 M~ILltNDDGi-~s~gl~~L~~~l~-~~~~V~vvAP~~~~S~~----g~ait~---~~~l~~~~~~~~~~~~-~~~v~GT 70 (247)
T d1j9ja_ 1 MRILVTNDDGI-QSKGIIVLAELLS-EEHEVFVVAPDKERSAT----GHSITI---HVPLWMKKVFISERVV-AYSTTGT 70 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHT-TTSEEEEEEESSCCTTC----TTCCCC---SSCCCEEECCCSSSEE-EEEESSC
T ss_pred CeEEEEcCCCC-CChHHHHHHHHHh-cCCeEEEEecCCCCcCC----cccccC---CCCcceEEeecCCCce-EEEeCCc
Confidence 68887766555 3334677888885 59999999985542222 222222 2224444443210000 0112233
Q ss_pred HHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcC----------Ccc---hHHHHHHHhCCceEEEecc
Q 012587 87 PELVDSLNCATPPLLKEMVSDSKSPVNCIITDG----------YMS---RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 87 ~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~----------~~~---~~~~~A~~lgiP~v~~~~~ 141 (460)
..-|-.+. +..++ ..+||+||+.. +++ .|+.-|..+|||.|.++..
T Consensus 71 PaDcv~~a------l~~l~---~~~pDlVvSGIN~G~N~g~dv~ySGTVgAA~ea~~~gipsiA~S~~ 129 (247)
T d1j9ja_ 71 PADCVKLA------YNVVM---DKRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISSA 129 (247)
T ss_dssp HHHHHHHH------HHTTS---TTCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEES
T ss_pred hHHHHHHh------hhhcc---cCcccEEEecccCCCccchhhhhHHHHHHHHHHHhcCCCcceehhh
Confidence 33333332 12222 34999999753 222 4666777999999998753
|
| >d1ccwa_ c.23.6.1 (A:) Glutamate mutase, small subunit {Clostridium cochlearium [TaxId: 1494]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Cobalamin (vitamin B12)-binding domain family: Cobalamin (vitamin B12)-binding domain domain: Glutamate mutase, small subunit species: Clostridium cochlearium [TaxId: 1494]
Probab=91.70 E-value=0.12 Score=39.21 Aligned_cols=47 Identities=11% Similarity=0.103 Sum_probs=39.7
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhh
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIR 51 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~ 51 (460)
++.||++.+.++..|.....-++..|..+|++|.+++..-..+.+.+
T Consensus 2 ~k~kVvi~~~~gD~H~lG~~mva~~l~~~G~~V~~LG~~~p~e~iv~ 48 (137)
T d1ccwa_ 2 EKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSPQELFIK 48 (137)
T ss_dssp CCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEECHHHHHH
T ss_pred CCCEEEEEecCCChhHHHHHHHHHHHHHCCCeEEecccccCHHHHHH
Confidence 45699999999999999999999999999999999986444444444
|
| >d1gsaa1 c.30.1.3 (A:1-122) Prokaryotic glutathione synthetase, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: Prokaryotic glutathione synthetase, N-terminal domain domain: Prokaryotic glutathione synthetase, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=89.54 E-value=0.24 Score=36.66 Aligned_cols=37 Identities=11% Similarity=0.197 Sum_probs=30.3
Q ss_pred CcEEEEEcCCCC---CCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 6 HVHVAILPLPAV---GHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 6 ~~~il~~~~~~~---Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
||||+|+.-|-. =.-.-+++|.++..+|||+|.++.+
T Consensus 1 mmkI~FimDpie~l~~~kDTT~~Lm~eAq~Rg~~v~~~~~ 40 (122)
T d1gsaa1 1 MIKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEM 40 (122)
T ss_dssp CCEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECG
T ss_pred CcEEEEEeCCHHHCCCCCChHHHHHHHHHHCCCeEEEEec
Confidence 789999987742 2344589999999999999999886
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=89.41 E-value=0.07 Score=44.50 Aligned_cols=44 Identities=14% Similarity=0.308 Sum_probs=37.1
Q ss_pred CCCCCCcEEEEEcCCCCCCHHHH------------HHHHHHHHhCCCeEEEEeCcc
Q 012587 1 MEKQDHVHVAILPLPAVGHVNSM------------LNLAELLGHAGIKITFLNTEH 44 (460)
Q Consensus 1 ~~~~~~~~il~~~~~~~Gh~~p~------------l~La~~L~~rGH~Vt~~~~~~ 44 (460)
|...+.+||++...|++-.+.|. .+||+++.++||+||+++++.
T Consensus 1 ~~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~ 56 (223)
T d1u7za_ 1 VNDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPV 56 (223)
T ss_dssp CCTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSC
T ss_pred CcccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccc
Confidence 34456689999999998888774 599999999999999999855
|
| >d1xmpa_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Bacillus anthracis [TaxId: 1392]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) family: N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) domain: N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) species: Bacillus anthracis [TaxId: 1392]
Probab=88.75 E-value=3.2 Score=31.44 Aligned_cols=137 Identities=9% Similarity=0.121 Sum_probs=76.0
Q ss_pred CcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhccccc
Q 012587 267 QSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAV 346 (460)
Q Consensus 267 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~ 346 (460)
||+|-|=+||.+ +....+.+...|+.+|..+-..+.. .+..|+.+.+ |+... ....+
T Consensus 1 K~~V~IimGS~S--D~~~~~~a~~~L~~~gi~~~~~v~S--------AHrtp~rl~~----------~~~~~---~~~~~ 57 (155)
T d1xmpa_ 1 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVS--------AHRTPDYMFE----------YAETA---RERGL 57 (155)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECC--------TTTSHHHHHH----------HHHHT---TTTTC
T ss_pred CCEEEEEECcHh--hHHHHHHHHHHHHHcCCcEEEEEec--------hhcChHHHHH----------HHHHH---Hhhcc
Confidence 467888888876 7788899999999999887655521 1234554332 11111 11223
Q ss_pred ccccccCCh----hHHHHHHHhCCceecccccccc---hhhHH-HHHhhhceeeeec--C---CcchHHHHHHHHHHHh-
Q 012587 347 GGFLTHCGW----NSTLESIVAGMPMICWPSFADQ---QINSR-FVGEVWKLGLDIK--D---LCDRNIVEKAVNDLMV- 412 (460)
Q Consensus 347 ~~~I~HGG~----gs~~eal~~GvP~l~~P~~~DQ---~~na~-~~~e~~G~g~~~~--~---~~~~~~l~~~i~~~l~- 412 (460)
+++|.=.|. .++..++ .-+|++.+|....- .+.-. .++-=-|+.+-.- . ..++.-+. .++|.
T Consensus 58 ~viIa~AG~aa~Lpgvva~~-t~~PVIgVP~~~~~~~G~d~llS~vqMP~Gipv~tv~v~~~~~~nAa~~A---~~Il~~ 133 (155)
T d1xmpa_ 58 KVIIAGAGGAAHLPGMVAAK-TNLPVIGVPVQSKALNGLDSLLSIVQMPGGVPVATVAIGKAGSTNAGLLA---AQILGS 133 (155)
T ss_dssp CEEEEEEESSCCHHHHHHTT-CCSCEEEEEECCTTTTTHHHHHHHHCCCTTCCCEECCSSHHHHHHHHHHH---HHHHHT
T ss_pred eEEEeecccCCCchhHHHHh-ccceEEEEEeecccCcCcccHHHHHhCccCCCceEEEecCcchHHHHHHH---HHHHcc
Confidence 346665553 3444443 45899999986432 11111 1110113332221 1 12233333 34444
Q ss_pred -HhHHHHHHHHHHHHHHHHHH
Q 012587 413 -ERKEEFMESADRMANLAKKS 432 (460)
Q Consensus 413 -~~~~~~~~~a~~l~~~~~~~ 432 (460)
| ++++++.+..++.+++.
T Consensus 134 ~d--~~l~~~l~~~r~~~~~~ 152 (155)
T d1xmpa_ 134 FH--DDIHDALELRREAIEKD 152 (155)
T ss_dssp TC--HHHHHHHHHHHHHHHHH
T ss_pred CC--HHHHHHHHHHHHHHHHh
Confidence 5 89999999988888764
|
| >d1l5xa_ c.106.1.1 (A:) SurE homolog PAE2908 (SurE-alpha) {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: SurE-like superfamily: SurE-like family: SurE-like domain: SurE homolog PAE2908 (SurE-alpha) species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=87.20 E-value=1.6 Score=37.16 Aligned_cols=114 Identities=11% Similarity=0.041 Sum_probs=64.9
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCCCCCh
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPDKF 86 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (460)
||||+.-=-+. |.--+.+|+++|.+.| +|+++.+.....-. |...+. ...+++..+...-.. .......
T Consensus 1 M~ILlTNDDGi-~a~Gl~~L~~~l~~~g-~V~vvAP~~~~Sg~----g~ait~---~~pl~~~~~~~~~~~--~~~v~GT 69 (276)
T d1l5xa_ 1 MKILVTNDDGV-HSPGLRLLYQFALSLG-DVDVVAPESPKSAT----GLGITL---HKPLRMYEVDLCGFR--AIATSGT 69 (276)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHGGGS-EEEEEEESSCTTTS----CSSCCC---SSCBCEEEEECSSSE--EEEESSC
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCCcCc----ccceeC---CCCcEEEEeecCCce--EEEEcCc
Confidence 68877766554 4455788999999998 69999875542222 222222 223555555321110 0112333
Q ss_pred HHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcC----------Cc-c---hHHHHHHHhCCceEEEecc
Q 012587 87 PELVDSLNCATPPLLKEMVSDSKSPVNCIITDG----------YM-S---RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 87 ~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~----------~~-~---~~~~~A~~lgiP~v~~~~~ 141 (460)
..-|-.+. +. .+. .+||+||+.. .+ + +|+.-|..+|||-|.++..
T Consensus 70 PaDCV~lg------l~-~~~---~~pDlVvSGIN~G~N~G~dv~~~SGTVgAA~Ea~~~GipsIA~S~~ 128 (276)
T d1l5xa_ 70 PSDTVYLA------TF-GLG---RKYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSAY 128 (276)
T ss_dssp HHHHHHHH------HH-HHT---SCCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEEEEEEC
T ss_pred chhhhhhh------hc-cCC---CCCCEEEECCcCCccCCceeEEechHHHHHHHHHhcCCCceeeeec
Confidence 43444332 11 122 3899999742 12 2 4666788999999999864
|
| >d1uana_ c.134.1.1 (A:) Hypothetical protein TT1542 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: LmbE-like superfamily: LmbE-like family: LmbE-like domain: Hypothetical protein TT1542 species: Thermus thermophilus [TaxId: 274]
Probab=86.84 E-value=0.81 Score=37.79 Aligned_cols=35 Identities=11% Similarity=0.153 Sum_probs=24.3
Q ss_pred CcEEEEE-cCCCCCCHHHHHHHHHHHHhCCCeEEEEe
Q 012587 6 HVHVAIL-PLPAVGHVNSMLNLAELLGHAGIKITFLN 41 (460)
Q Consensus 6 ~~~il~~-~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~ 41 (460)
|||||++ +.|. --..-+-..-..++++|++|++++
T Consensus 1 m~~VLvi~aHPD-De~lg~GGtiak~~~~G~~V~vv~ 36 (227)
T d1uana_ 1 MLDLLVVAPHPD-DGELGCGGTLARAKAEGLSTGILD 36 (227)
T ss_dssp CEEEEEEESSTT-HHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CceEEEEEeCCC-hHHHHHHHHHHHHHHcCCeEEEEE
Confidence 7899887 5554 333445555566788999999888
|
| >d1u11a_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Acetobacter aceti [TaxId: 435]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) family: N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) domain: N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) species: Acetobacter aceti [TaxId: 435]
Probab=86.64 E-value=4.2 Score=30.94 Aligned_cols=141 Identities=10% Similarity=0.044 Sum_probs=75.1
Q ss_pred cEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccc
Q 012587 268 SVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVG 347 (460)
Q Consensus 268 ~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~ 347 (460)
|.|-|=+||.+ +....+.+.+.|+.+|..+-..+-. .+..|+.+.+.. .. +....++
T Consensus 3 P~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~v~S--------AHR~p~~l~~~~----------~~---~e~~~~~ 59 (159)
T d1u11a_ 3 PVVGIIMGSQS--DWETMRHADALLTELEIPHETLIVS--------AHRTPDRLADYA----------RT---AAERGLN 59 (159)
T ss_dssp CSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECC--------TTTCHHHHHHHH----------HH---TTTTTCC
T ss_pred CeEEEEeCCHh--hHHHHHHHHHHHHHhCCceEEEEeh--------HhhChHHHHHHH----------HH---HHhcCCe
Confidence 55667788775 6677888999999999887555421 124455443211 11 1111223
Q ss_pred cccccCCh----hHHHHHHHhCCceeccccccc---chhhHHHHH-hhhceee--eecCCcchHHHHHHHHHHHh--HhH
Q 012587 348 GFLTHCGW----NSTLESIVAGMPMICWPSFAD---QQINSRFVG-EVWKLGL--DIKDLCDRNIVEKAVNDLMV--ERK 415 (460)
Q Consensus 348 ~~I~HGG~----gs~~eal~~GvP~l~~P~~~D---Q~~na~~~~-e~~G~g~--~~~~~~~~~~l~~~i~~~l~--~~~ 415 (460)
++|.=.|. .++. |-..-+|++.+|...+ ..++-.-+. -=-|+.+ ..-..-+...-.-.-.++|. |
T Consensus 60 viIa~AG~aaaLpgvv-a~~t~~PVIgvP~~~~~~~g~d~l~S~~qMP~g~pv~tv~vg~~~~~nAa~~A~~IL~~~d-- 136 (159)
T d1u11a_ 60 VIIAGAGGAAHLPGMC-AAWTRLPVLGVPVESRALKGMDSLLSIVQMPGGVPVGTLAIGASGAKNAALLAASILALYN-- 136 (159)
T ss_dssp EEEEEEESSCCHHHHH-HHHCSSCEEEEEECCTTTTTHHHHHHHHCCCTTSCCEECCSSHHHHHHHHHHHHHHHGGGC--
T ss_pred EEEEEecCCCCCccce-eeecceeEEEeccccccccccccHHHHhhCcCCCCceEEEecCCchHHHHHHHHHHHhcCC--
Confidence 36655553 2333 3344579999997543 333322221 1113332 21121122222222234443 6
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q 012587 416 EEFMESADRMANLAKKSVN 434 (460)
Q Consensus 416 ~~~~~~a~~l~~~~~~~~~ 434 (460)
++++++.+++++++++.+.
T Consensus 137 ~~l~~kl~~~r~~~~~~v~ 155 (159)
T d1u11a_ 137 PALAARLETWRALQTASVP 155 (159)
T ss_dssp HHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999999988643
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=86.06 E-value=1.2 Score=33.89 Aligned_cols=36 Identities=25% Similarity=0.377 Sum_probs=29.0
Q ss_pred CCCcEEEEEc-CCCCCCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 012587 4 QDHVHVAILP-LPAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (460)
Q Consensus 4 ~~~~~il~~~-~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (460)
.+|.||+|+- .|..|. .+|+.|+++||+|+++....
T Consensus 7 ~~~~kI~iIGg~G~mG~-----~la~~L~~~G~~V~~~d~~~ 43 (152)
T d2pv7a2 7 SDIHKIVIVGGYGKLGG-----LFARYLRASGYPISILDRED 43 (152)
T ss_dssp TTCCCEEEETTTSHHHH-----HHHHHHHTTTCCEEEECTTC
T ss_pred CCCCeEEEEcCCCHHHH-----HHHHHHHHcCCCcEeccccc
Confidence 3567999998 676664 48999999999999997643
|
| >d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: 10-formyltetrahydrofolate dehydrogenase domain 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.45 E-value=2.5 Score=33.94 Aligned_cols=31 Identities=16% Similarity=0.146 Sum_probs=25.1
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
|||+|+ |--...+.+.+.|.++||+|..+.+
T Consensus 1 MkI~~~-----G~~~~~~~~l~~L~~~~~~i~~V~t 31 (203)
T d2bw0a2 1 MKIAVI-----GQSLFGQEVYCHLRKEGHEVVGVFT 31 (203)
T ss_dssp CEEEEE-----CCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CEEEEE-----cCCHHHHHHHHHHHHCCCcEEEEEc
Confidence 699998 4456678899999999999996554
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=83.64 E-value=2.4 Score=38.93 Aligned_cols=111 Identities=18% Similarity=0.215 Sum_probs=65.7
Q ss_pred ceeeeecChHh---hhcccccccccc--cCChh-HHHHHHHhCCce----ecccccccchhhHHHHHhhhceeeeecCCc
Q 012587 329 GCIAGWVPQEE---VLAHSAVGGFLT--HCGWN-STLESIVAGMPM----ICWPSFADQQINSRFVGEVWKLGLDIKDLC 398 (460)
Q Consensus 329 ~~~~~~vp~~~---il~~~~~~~~I~--HGG~g-s~~eal~~GvP~----l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~ 398 (460)
+.+...+++.+ ++..+++ ++++ .-|+| +..|++++|+|. |++.-. ..-+ +.++-|+.+ ...
T Consensus 333 v~~~~~~~~~~l~a~~~~Adv-~v~~s~~EG~~lv~~Ea~a~~~p~~~g~lIlS~~---~G~~----~~l~~g~lV-nP~ 403 (456)
T d1uqta_ 333 YYLNQHFDRKLLMKIFRYSDV-GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQF---AGAA----NELTSALIV-NPY 403 (456)
T ss_dssp EEECSCCCHHHHHHHHHHCSE-EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETT---BGGG----GTCTTSEEE-CTT
T ss_pred eeccCCcCHHHHhHHHhhhce-eecCCccCCCCcHHHHHHHhCCCCCCCcEEEeCC---CCCH----HHhCCeEEE-CcC
Confidence 33445666544 4566776 2332 45665 789999999993 333211 1111 223336666 567
Q ss_pred chHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHhh
Q 012587 399 DRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKMM 453 (460)
Q Consensus 399 ~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~~ 453 (460)
+.+.++++|.++|++-..+-+++.+++.+.+++ -....-.++|+++|..-
T Consensus 404 d~~~~A~ai~~aL~~~~~er~~~~~~~~~~v~~-----~~~~~W~~~fl~~l~~~ 453 (456)
T d1uqta_ 404 DRDEVAAALDRALTMSLAERISRHAEMLDVIVK-----NDINHWQECFISDLKQI 453 (456)
T ss_dssp CHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-----CCHHHHHHHHHHHHHhh
Confidence 999999999999983112334445555555554 23344468888888764
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=83.43 E-value=0.29 Score=39.40 Aligned_cols=35 Identities=14% Similarity=0.085 Sum_probs=30.3
Q ss_pred CCCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 3 KQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 3 ~~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
.+.|.||+++-.|++|. +||..|.+.||+|++...
T Consensus 4 ~~~m~KI~ViGaG~wGt-----AlA~~La~~g~~V~l~~r 38 (189)
T d1n1ea2 4 LLYLNKAVVFGSGAFGT-----ALAMVLSKKCREVCVWHM 38 (189)
T ss_dssp CCCEEEEEEECCSHHHH-----HHHHHHHTTEEEEEEECS
T ss_pred cceeceEEEECCCHHHH-----HHHHHHHHcCCeEEEEEe
Confidence 46778999999998874 789999999999999975
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=82.45 E-value=0.84 Score=31.87 Aligned_cols=35 Identities=20% Similarity=0.325 Sum_probs=29.3
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
.++.||-|+-.++.| +-+||+.|+++||+|+-.-.
T Consensus 6 ~~~~~ihfiGigG~G----Ms~LA~~L~~~G~~VsGSD~ 40 (96)
T d1p3da1 6 RRVQQIHFIGIGGAG----MSGIAEILLNEGYQISGSDI 40 (96)
T ss_dssp TTCCEEEEETTTSTT----HHHHHHHHHHHTCEEEEEES
T ss_pred hhCCEEEEEEECHHH----HHHHHHHHHhCCCEEEEEeC
Confidence 345799999999877 57799999999999997653
|
| >d1o4va_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) family: N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) domain: N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) species: Thermotoga maritima [TaxId: 2336]
Probab=80.85 E-value=10 Score=29.04 Aligned_cols=138 Identities=12% Similarity=0.106 Sum_probs=73.8
Q ss_pred cEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccc
Q 012587 268 SVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVG 347 (460)
Q Consensus 268 ~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~ 347 (460)
|.|-|=+||.+ +....+.+...|+.+|..+-..+.. .+..|..+.+... . +....++
T Consensus 1 PkV~Ii~Gs~S--D~~~~~~a~~~L~~~gi~~~~~v~s--------aHr~p~rl~~~~~----------~---~~~~~~~ 57 (169)
T d1o4va_ 1 PRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIVS--------AHRTPDRMFEYAK----------N---AEERGIE 57 (169)
T ss_dssp CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEECC--------TTTCHHHHHHHHH----------H---TTTTTCC
T ss_pred CeEEEEECcHh--hHHHHHHHHHHHHHcCCcEEEEEee--------eecCHHHHHHHHH----------H---HHhcCCe
Confidence 34666677764 7778899999999999887555521 1234444332111 0 1111222
Q ss_pred cccccCCh----hHHHHHHHhCCceecccccccc---hhhH-HHHHhhhceeeeec---CCcchHHHHHHHHHHHhHhHH
Q 012587 348 GFLTHCGW----NSTLESIVAGMPMICWPSFADQ---QINS-RFVGEVWKLGLDIK---DLCDRNIVEKAVNDLMVERKE 416 (460)
Q Consensus 348 ~~I~HGG~----gs~~eal~~GvP~l~~P~~~DQ---~~na-~~~~e~~G~g~~~~---~~~~~~~l~~~i~~~l~~~~~ 416 (460)
++|.=.|. .++..+ ..-+|++.+|..... .+.- ..+.-=.|+++..- +..++.-++..|-.+ .| +
T Consensus 58 viIa~AG~aa~LpgvvA~-~t~~PVIgvP~~~~~~~G~daLlS~lqmp~gvpVatV~Id~~~nAA~~A~~Il~l-~d--~ 133 (169)
T d1o4va_ 58 VIIAGAGGAAHLPGMVAS-ITHLPVIGVPVKTSTLNGLDSLFSIVQMPGGVPVATVAINNAKNAGILAASILGI-KY--P 133 (169)
T ss_dssp EEEEEEESSCCHHHHHHH-HCSSCEEEEEECCTTTTTHHHHHHHHTCCTTCCCEECCTTCHHHHHHHHHHHHHT-TC--H
T ss_pred EEEEeecCCcCchHHHHH-hcceeEEecccccccCccHHHHHHhccCCccCCceeeecCchHHHHHHHHHHHhC-CC--H
Confidence 35544442 233333 346899999985433 2221 12211125444432 223333333333222 36 8
Q ss_pred HHHHHHHHHHHHHHHH
Q 012587 417 EFMESADRMANLAKKS 432 (460)
Q Consensus 417 ~~~~~a~~l~~~~~~~ 432 (460)
+++++.+++++.+++.
T Consensus 134 ~i~~kl~~~r~~~~~~ 149 (169)
T d1o4va_ 134 EIARKVKEYKERMKRE 149 (169)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998875
|
| >d7reqa2 c.23.6.1 (A:561-728) Methylmalonyl-CoA mutase alpha subunit, C-terminal domain {Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Cobalamin (vitamin B12)-binding domain family: Cobalamin (vitamin B12)-binding domain domain: Methylmalonyl-CoA mutase alpha subunit, C-terminal domain species: Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]
Probab=80.81 E-value=1.2 Score=34.77 Aligned_cols=49 Identities=10% Similarity=0.091 Sum_probs=40.6
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhc
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRH 52 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~ 52 (460)
.++.||++.+.+..+|-.-.--++..|...|++|.........+.+.+.
T Consensus 35 gr~pkVlla~~g~D~Hd~G~~~va~~l~~~G~eVi~lg~~~~~e~iv~a 83 (168)
T d7reqa2 35 GRRPRILLAKMGQDGHDRGQKVIATAYADLGFDVDVGPLFQTPEETARQ 83 (168)
T ss_dssp SSCCEEEEECBTTCCCCHHHHHHHHHHHHTTCEEEECCTTBCHHHHHHH
T ss_pred CCCCeEEEEeCCccHHHHHHHHHHHHHHhCCcceecCCCcCcHHHHHHH
Confidence 3467999999999999999999999999999999998764445555443
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=80.10 E-value=0.7 Score=31.79 Aligned_cols=32 Identities=16% Similarity=0.121 Sum_probs=27.2
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
|||-|+-.++.| +-+||+.|+++||+|+-.--
T Consensus 2 ~~ihfiGIgG~G----Ms~LA~~L~~~G~~VsGSD~ 33 (89)
T d1j6ua1 2 MKIHFVGIGGIG----MSAVALHEFSNGNDVYGSNI 33 (89)
T ss_dssp CEEEEETTTSHH----HHHHHHHHHHTTCEEEEECS
T ss_pred cEEEEEeECHHH----HHHHHHHHHhCCCeEEEEeC
Confidence 689999888855 77899999999999998653
|