Citrus Sinensis ID: 012645
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 459 | 2.2.26 [Sep-21-2011] | |||||||
| O48676 | 460 | UDP-glycosyltransferase 7 | yes | no | 0.956 | 0.954 | 0.481 | 1e-118 | |
| O22822 | 449 | UDP-glycosyltransferase 7 | no | no | 0.949 | 0.971 | 0.458 | 1e-116 | |
| O22820 | 449 | UDP-glycosyltransferase 7 | no | no | 0.943 | 0.964 | 0.448 | 1e-113 | |
| P0C7P7 | 453 | UDP-glycosyltransferase 7 | no | no | 0.962 | 0.975 | 0.447 | 1e-111 | |
| Q9SYK9 | 453 | UDP-glycosyltransferase 7 | no | no | 0.962 | 0.975 | 0.440 | 1e-111 | |
| Q9SKC5 | 456 | UDP-glycosyltransferase 7 | no | no | 0.954 | 0.960 | 0.440 | 1e-106 | |
| Q6X1C0 | 460 | Crocetin glucosyltransfer | N/A | no | 0.954 | 0.952 | 0.450 | 1e-105 | |
| Q9SKC1 | 457 | UDP-glycosyltransferase 7 | no | no | 0.971 | 0.975 | 0.402 | 1e-101 | |
| Q41819 | 471 | Indole-3-acetate beta-glu | N/A | no | 0.954 | 0.929 | 0.437 | 4e-98 | |
| Q9LR44 | 469 | UDP-glycosyltransferase 7 | no | no | 0.912 | 0.893 | 0.372 | 8e-81 |
| >sp|O48676|U74B1_ARATH UDP-glycosyltransferase 74B1 OS=Arabidopsis thaliana GN=UGT74B1 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 424 bits (1089), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/455 (48%), Positives = 299/455 (65%), Gaps = 16/455 (3%)
Query: 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDE-- 66
HV++L YP QGH+NP++QFAKRL SK VK T+ATT YT SI ++ VEPISDGFD
Sbjct: 11 HVVILPYPVQGHLNPMVQFAKRLVSKNVKVTIATTTYTASSITTPSLSVEPISDGFDFIP 70
Query: 67 ---GGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQF 123
GF SV Y ESFK GS TL +I K+K ++SP++C++YDS L W L+VAR
Sbjct: 71 IGIPGF----SVDTYSESFKLNGSETLTLLIEKFKSTDSPIDCLIYDSFLPWGLEVARSM 126
Query: 124 GIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPGLPSLASSDLPSFLAQP-AS 182
+ A+ TN+ +VCS+ + ++G LP + + P + GLPSL+ +LPSF+ + +
Sbjct: 127 ELSAASFFTNNLTVCSVLRKFSNGDFPLPADPNSAPFRIRGLPSLSYDELPSFVGRHWLT 186
Query: 183 NPAYLAAILEQFGSLNKNDWVLCNSFEELE--KELLRAMLGLWPLVMIGPLVPSAYLDQQ 240
+P + +L QF + DW+ N FE LE ++ +IGP++PSAYLD +
Sbjct: 187 HPEHGRVLLNQFPNHENADWLFVNGFEGLEETQDCENGESDAMKATLIGPMIPSAYLDDR 246
Query: 241 IAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKP 300
+ D YGA++ +P +CM WL TK +SV +VSFGS + Q+ E+A L+ S+
Sbjct: 247 MEDDKDYGASLLKPISKECMEWLETKQAQSVAFVSFGSFGILFEKQLAEVAIALQESDLN 306
Query: 301 FLWVVKENE-NKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSL 359
FLWV+KE KLP FV S + L+V WCNQ EVLAH+++GCF+THCGWNS LEGLSL
Sbjct: 307 FLWVIKEAHIAKLPEGFVESTKDRALLVSWCNQLEVLAHESIGCFLTHCGWNSTLEGLSL 366
Query: 360 GVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAG--IVTGEELNKCVNEVMDGERSQK 417
GV +V VPQ+SDQ +AKFVEEVW+VG RAK+ AG IV EEL +C+ VM+GE S K
Sbjct: 367 GVPMVGVPQWSDQMNDAKFVEEVWKVGYRAKE-EAGEVIVKSEELVRCLKGVMEGESSVK 425
Query: 418 IKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLLK 452
I+ + KW++ A KA+S GGSSD++I+EF+ L K
Sbjct: 426 IRESSKKWKDLAVKAMSEGGSSDRSINEFIESLGK 460
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Involved in the biosynthesis of glucosinolate. In in vitro assay, may use phenylacetothiohydroximate (PATH), but not phenylacetic acid (PAA), indole-3-acetic acid (IAA) or salicylic acid (SA) as substrate. Specific for the thiohydroximate functional group and does not glucosylate the carboxylate group or a hydroxyl group. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 9EC: 5 |
| >sp|O22822|U74F2_ARATH UDP-glycosyltransferase 74F2 OS=Arabidopsis thaliana GN=UGT74F2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 417 bits (1072), Expect = e-116, Method: Compositional matrix adjust.
Identities = 209/456 (45%), Positives = 299/456 (65%), Gaps = 20/456 (4%)
Query: 4 QRERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVG---VEPI 60
+ +R HVL + YP QGHI P QF KRL K +K TLA T + SI+ G + I
Sbjct: 2 EHKRGHVLAVPYPTQGHITPFRQFCKRLHFKGLKTTLALTTFVFNSINPDLSGPISIATI 61
Query: 61 SDGFDEGGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVA 120
SDG+D GGF+ A S+ YL+ FKT GS+T+A++I K++ S++P+ CIVYD+ L WALDVA
Sbjct: 62 SDGYDHGGFETADSIDDYLKDFKTSGSKTIADIIQKHQTSDNPITCIVYDAFLPWALDVA 121
Query: 121 RQFGIYGAAMMTNSASVCSMYW--QINHGLLTLPVNQETVPLTLPGLPSLASSDLPSFLA 178
R+FG+ T +V +Y+ IN+G L LP+ + LP L DLPSF +
Sbjct: 122 REFGLVATPFFTQPCAVNYVYYLSYINNGSLQLPIEE---------LPFLELQDLPSFFS 172
Query: 179 QPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAYLD 238
S PAY +L+QF + K D+VL NSF+ELE P++ IGP +PS YLD
Sbjct: 173 VSGSYPAYFEMVLQQFINFEKADFVLVNSFQELELHENELWSKACPVLTIGPTIPSIYLD 232
Query: 239 QQIAGDSAYGANIWEPTGDQ-CMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKAS 297
Q+I D+ Y N++E D C+ WL T+P+ SV+YV+FGSMA + Q++E+A + S
Sbjct: 233 QRIKSDTGYDLNLFESKDDSFCINWLDTRPQGSVVYVAFGSMAQLTNVQMEELASAV--S 290
Query: 298 EKPFLWVVKENEN-KLPVEFVNSVG-ETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILE 355
FLWVV+ +E KLP F+ +V E LV++W Q +VL+++A+GCF+THCGWNS +E
Sbjct: 291 NFSFLWVVRSSEEEKLPSGFLETVNKEKSLVLKWSPQLQVLSNKAIGCFLTHCGWNSTME 350
Query: 356 GLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNR-AGIVTGEELNKCVNEVMDGER 414
L+ GV +VA+PQ++DQP NAK++++VW+ GVR K + +GI EE+ + EVM+GER
Sbjct: 351 ALTFGVPMVAMPQWTDQPMNAKYIQDVWKAGVRVKTEKESGIAKREEIEFSIKEVMEGER 410
Query: 415 SQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRL 450
S+++K+NV KWR+ A K+++ GGS+D NID FV R+
Sbjct: 411 SKEMKKNVKKWRDLAVKSLNEGGSTDTNIDTFVSRV 446
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Glycosyltransferase that glucosylates benzoic acid and derivatives. Substrate preference is benzoic acid > salicylic acid (SA) > 3-hydroxybenzoic acid > 4-hydroxybenzoic acid. Catalyzes the formation of both SA 2-O-beta-D-glucoside (SAG) and SA glucose ester (SGE). Has high affinity for the tryptophan precursor anthranilate. Catalyzes the formation of anthranilate glucose ester. Is the major source of this activity in the plant. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|O22820|U74F1_ARATH UDP-glycosyltransferase 74F1 OS=Arabidopsis thaliana GN=UGT74F1 PE=1 SV=1 | Back alignment and function description |
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Score = 408 bits (1048), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/459 (44%), Positives = 308/459 (67%), Gaps = 26/459 (5%)
Query: 4 QRERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIH---ATTVGVEPI 60
++ R HVL + +P+QGHI P+ QF KRL SK K T T + +IH ++ + + I
Sbjct: 2 EKMRGHVLAVPFPSQGHITPIRQFCKRLHSKGFKTTHTLTTFIFNTIHLDPSSPISIATI 61
Query: 61 SDGFDEGGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVA 120
SDG+D+GGF A SV YL++FKT GS+T+A++I K++ +++P+ CIVYDS + WALD+A
Sbjct: 62 SDGYDQGGFSSAGSVPEYLQNFKTFGSKTVADIIRKHQSTDNPITCIVYDSFMPWALDLA 121
Query: 121 RQFGIYGAAMMTNSASVCSMYW--QINHGLLTLPVNQETVPLTLPGLPSLASSDLPSFLA 178
FG+ A T S +V + + IN+G LTLP+ LP L DLP+F+
Sbjct: 122 MDFGLAAAPFFTQSCAVNYINYLSYINNGSLTLPIKD---------LPLLELQDLPTFVT 172
Query: 179 QPASNPAYLAAILEQFGSLNKNDWVLCNSFEEL---EKELLRAMLGLWPLVMIGPLVPSA 235
S+ AY +L+QF + +K D+VL NSF +L E+ELL + P++ IGP VPS
Sbjct: 173 PTGSHLAYFEMVLQQFTNFDKADFVLVNSFHDLDLHEEELLSKVC---PVLTIGPTVPSM 229
Query: 236 YLDQQIAGDSAYGANIWE-PTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGL 294
YLDQQI D+ Y N+++ C WL +PE SV+Y++FGSMA +++ Q++EIA +
Sbjct: 230 YLDQQIKSDNDYDLNLFDLKEAALCTDWLDKRPEGSVVYIAFGSMAKLSSEQMEEIASAI 289
Query: 295 KASEKPFLWVVKENE-NKLPVEFVNSVG-ETGLVVRWCNQFEVLAHQAVGCFITHCGWNS 352
S +LWVV+ +E +KLP F+ +V + LV++W Q +VL+++A+GCF+THCGWNS
Sbjct: 290 --SNFSYLWVVRASEESKLPPGFLETVDKDKSLVLKWSPQLQVLSNKAIGCFMTHCGWNS 347
Query: 353 ILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNR-AGIVTGEELNKCVNEVMD 411
+EGLSLGV +VA+PQ++DQP NAK++++VW+VGVR K + +GI EE+ + EVM+
Sbjct: 348 TMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAEKESGICKREEIEFSIKEVME 407
Query: 412 GERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRL 450
GE+S+++K N KWR+ A K++S GGS+D NI+EFV ++
Sbjct: 408 GEKSKEMKENAGKWRDLAVKSLSEGGSTDININEFVSKI 446
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Possesses quercetin 7-O-glucosyltransferase and 4'-O-glucosyltransferase activities in vitro. Also active in vitro on benzoates and benzoate derivatives. Has low affinity for the tryptophan precursor anthranilate. Catalyzes the formation of anthranilate glucose ester. Is a minor source of this activity in the plant. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|P0C7P7|U74E1_ARATH UDP-glycosyltransferase 74E1 OS=Arabidopsis thaliana GN=UGT74E1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 403 bits (1036), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/449 (44%), Positives = 294/449 (65%), Gaps = 7/449 (1%)
Query: 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHAT---TVGVEPIS 61
RE HV+VL +PAQGHI P+ QF KRLASK +K TL + T T+ V PIS
Sbjct: 2 REGSHVIVLPFPAQGHITPMSQFCKRLASKSLKITLVLVSDKPSPPYKTEHDTITVVPIS 61
Query: 62 DGFDEGGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVAR 121
+GF EG +++ + Y+E ++ L ++I K S +P +VYDS + W LDVA
Sbjct: 62 NGFQEGQ-ERSEDLDEYMERVESSIKNRLPKLIEDMKLSGNPPRALVYDSTMPWLLDVAH 120
Query: 122 QFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQ--ETVPLTLPGLPSLASSDLPSFLAQ 179
+G+ GA T V ++Y+ + G ++P + + + P LP L ++DLPSFL +
Sbjct: 121 SYGLSGAVFFTQPWLVSAIYYHVFKGSFSVPSTKYGHSTLASFPSLPILNANDLPSFLCE 180
Query: 180 PASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAYLDQ 239
+S P L +++Q ++++ D VLCN+F++LE++LL+ + +WP++ IGP VPS YLD+
Sbjct: 181 SSSYPYILRTVIDQLSNIDRVDIVLCNTFDKLEEKLLKWIKSVWPVLNIGPTVPSMYLDK 240
Query: 240 QIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEK 299
++A D YG +++ +CM WL +K SV+YVSFGS+ + +Q+ E+A GLK S
Sbjct: 241 RLAEDKNYGFSLFGAKIAECMEWLNSKQPSSVVYVSFGSLVVLKKDQLIELAAGLKQSGH 300
Query: 300 PFLWVVKENEN-KLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLS 358
FLWVV+E E KLP ++ +GE GL V W Q EVL H+++GCF+THCGWNS LEGLS
Sbjct: 301 FFLWVVRETERRKLPENYIEEIGEKGLTVSWSPQLEVLTHKSIGCFVTHCGWNSTLEGLS 360
Query: 359 LGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKI 418
LGV ++ +P ++DQPTNAKF+E+VW+VGVR K + G V EE + V EVM+ E+ ++I
Sbjct: 361 LGVPMIGMPHWADQPTNAKFMEDVWKVGVRVKADSDGFVRREEFVRRVEEVMEAEQGKEI 420
Query: 419 KRNVSKWREFAKKAVSAGGSSDKNIDEFV 447
++N KW+ A++AVS GGSSDKNI+EFV
Sbjct: 421 RKNAEKWKVLAQEAVSEGGSSDKNINEFV 449
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q9SYK9|U74E2_ARATH UDP-glycosyltransferase 74E2 OS=Arabidopsis thaliana GN=UGT74E2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 402 bits (1032), Expect = e-111, Method: Compositional matrix adjust.
Identities = 198/449 (44%), Positives = 296/449 (65%), Gaps = 7/449 (1%)
Query: 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHAT---TVGVEPIS 61
RE H++VL +P QGHI P+ QF KRLASK +K TL + T ++ V PIS
Sbjct: 2 REGSHLIVLPFPGQGHITPMSQFCKRLASKGLKLTLVLVSDKPSPPYKTEHDSITVFPIS 61
Query: 62 DGFDEGGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVAR 121
+GF EG + + Y+E +T TL +++ K S +P IVYDS + W LDVA
Sbjct: 62 NGFQEGE-EPLQDLDDYMERVETSIKNTLPKLVEDMKLSGNPPRAIVYDSTMPWLLDVAH 120
Query: 122 QFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQ--ETVPLTLPGLPSLASSDLPSFLAQ 179
+G+ GA T V ++Y+ + G ++P + + + P P L ++DLPSFL +
Sbjct: 121 SYGLSGAVFFTQPWLVTAIYYHVFKGSFSVPSTKYGHSTLASFPSFPMLTANDLPSFLCE 180
Query: 180 PASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAYLDQ 239
+S P L +++Q ++++ D VLCN+F++LE++LL+ + LWP++ IGP VPS YLD+
Sbjct: 181 SSSYPNILRIVVDQLSNIDRVDIVLCNTFDKLEEKLLKWVQSLWPVLNIGPTVPSMYLDK 240
Query: 240 QIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEK 299
+++ D YG +++ +CM WL +K SV+Y+SFGS+ + +Q+ E+A GLK S +
Sbjct: 241 RLSEDKNYGFSLFNAKVAECMEWLNSKEPNSVVYLSFGSLVILKEDQMLELAAGLKQSGR 300
Query: 300 PFLWVVKENE-NKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLS 358
FLWVV+E E +KLP +V +GE GL+V W Q +VLAH+++GCF+THCGWNS LEGLS
Sbjct: 301 FFLWVVRETETHKLPRNYVEEIGEKGLIVSWSPQLDVLAHKSIGCFLTHCGWNSTLEGLS 360
Query: 359 LGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKI 418
LGV ++ +P ++DQPTNAKF+++VW+VGVR K G V EE+ + V EVM+GE+ ++I
Sbjct: 361 LGVPMIGMPHWTDQPTNAKFMQDVWKVGVRVKAEGDGFVRREEIMRSVEEVMEGEKGKEI 420
Query: 419 KRNVSKWREFAKKAVSAGGSSDKNIDEFV 447
++N KW+ A++AVS GGSSDK+I+EFV
Sbjct: 421 RKNAEKWKVLAQEAVSEGGSSDKSINEFV 449
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Glucosyltransferase that acts on the auxin indole-3-butyric acid (IBA). Mediates abiotic stress responses and stress-induced morphological adaptations by regulating auxin homeostasis. Possesses low activity in vitro on jasmonate (JA) and the synthetic auxin analog naphthaleneacetic acid (NAA). Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q9SKC5|U74D1_ARATH UDP-glycosyltransferase 74D1 OS=Arabidopsis thaliana GN=UGT74D1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 385 bits (989), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/465 (44%), Positives = 291/465 (62%), Gaps = 27/465 (5%)
Query: 4 QRERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSI--HATTVGVE--- 58
++ + +VLV ++P QGHINPLLQF+KRL SK V T TT T SI A T G
Sbjct: 3 EKAKANVLVFSFPIQGHINPLLQFSKRLLSKNVNVTFLTTSSTHNSILRRAITGGATALP 62
Query: 59 ----PISDGFDEGGFKQAPSVKA---YLESFKTVGSRTLAEVILKYKDSESPVNCIVYDS 111
PI DGF+E PS Y F+ SR+L+E+I + N +VYDS
Sbjct: 63 LSFVPIDDGFEE----DHPSTDTSPDYFAKFQENVSRSLSELI---SSMDPKPNAVVYDS 115
Query: 112 LLTWALDVARQF-GIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPGLPSLAS 170
L + LDV R+ G+ A+ T S++V + Y G N + LP +P L
Sbjct: 116 CLPYVLDVCRKHPGVAAASFFTQSSTVNATYIHFLRGEFKEFQND----VVLPAMPPLKG 171
Query: 171 SDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGP 230
+DLP FL I QF +++ D+ L NSF+ELE E+L+ M WP+ IGP
Sbjct: 172 NDLPVFLYDNNLCRPLFELISSQFVNVDDIDFFLVNSFDELEVEVLQWMKNQWPVKNIGP 231
Query: 231 LVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEI 290
++PS YLD+++AGD YG N++ ++C+ WL +KP SVIYVSFGS+A + +Q+ E+
Sbjct: 232 MIPSMYLDKRLAGDKDYGINLFNAQVNECLDWLDSKPPGSVIYVSFGSLAVLKDDQMIEV 291
Query: 291 ARGLKASEKPFLWVVKENENK-LPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCG 349
A GLK + FLWVV+E E K LP ++ + + GL+V W Q +VLAH+++GCF+THCG
Sbjct: 292 AAGLKQTGHNFLWVVRETETKKLPSNYIEDICDKGLIVNWSPQLQVLAHKSIGCFMTHCG 351
Query: 350 WNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEV 409
WNS LE LSLGVA++ +P +SDQPTNAKF+E+VW+VGVR K ++ G V EE+ +CV EV
Sbjct: 352 WNSTLEALSLGVALIGMPAYSDQPTNAKFIEDVWKVGVRVKADQNGFVPKEEIVRCVGEV 411
Query: 410 MD--GERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLLK 452
M+ E+ ++I++N + EFA++A+S GG+SDKNIDEFV ++++
Sbjct: 412 MEDMSEKGKEIRKNARRLMEFAREALSDGGNSDKNIDEFVAKIVR 456
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Glucosyltransferase that glucosylates jasmonate (JA) and JA derivatives. Also active on indole-3-acetic acid (IAA), 4-coumrate, cinnamate and caffeate. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q6X1C0|GLT2_CROSA Crocetin glucosyltransferase 2 OS=Crocus sativus GN=GLT2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 382 bits (981), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/446 (45%), Positives = 270/446 (60%), Gaps = 8/446 (1%)
Query: 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATT--VGVEPISDGF 64
+ H+L+L PAQGHINP+LQF KRLAS + TL T + S + V ++ ISDGF
Sbjct: 6 KCHILLLPCPAQGHINPILQFGKRLASHNLLTTLVNTRFLSNSTKSEPGPVNIQCISDGF 65
Query: 65 DEGGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFG 124
D GG APS +AY + ++ + +I + P C + WA++VA + G
Sbjct: 66 DPGGMNAAPSRRAYFDRPQSRSGQKHVGLIESLRSRGRPGACFGLRPVPLWAMNVAERSG 125
Query: 125 IYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPGLPSLASSDLPSFLAQPAS-- 182
+ A T +V ++Y + G + +PV + P+ LPGLP L SDLP
Sbjct: 126 LRSVAFFTQPCAVDTIYRHVWEGRIKVPVAE---PVRLPGLPPLEPSDLPCVRNGFGRVV 182
Query: 183 NPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAYLDQQIA 242
NP L + Q +L+K D + NS ELE +LL P+ IGP VPS YLD +I
Sbjct: 183 NPDLLPLRVNQHKNLDKADMMGRNSIYELEADLLDGSRLPLPVKSIGPTVPSTYLDNRIP 242
Query: 243 GDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFL 302
DS YG N++ P + WL +K SVIYVSFGS++ ++ +Q +EIA GL A+ K F+
Sbjct: 243 SDSHYGFNLYTPDTTPYLDWLDSKAPNSVIYVSFGSLSSLSPDQTNEIASGLIATNKSFI 302
Query: 303 WVVKENE-NKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGV 361
WVV+ +E KLP F GLVV WC+Q ++LAH A GCF+THCGWNS +EG++LGV
Sbjct: 303 WVVRTSELAKLPANFTQENASRGLVVTWCDQLDLLAHVATGCFVTHCGWNSTMEGVALGV 362
Query: 362 AVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRN 421
+V VPQ+SDQP NAK+VE+VW+VGVRAK V GEE +CV EVMDGERS KI+ N
Sbjct: 363 PMVGVPQWSDQPMNAKYVEDVWKVGVRAKTYGKDFVRGEEFKRCVEEVMDGERSGKIREN 422
Query: 422 VSKWREFAKKAVSAGGSSDKNIDEFV 447
++W + AK +VS GGSSDK I EF+
Sbjct: 423 AARWCKLAKDSVSEGGSSDKCIKEFI 448
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Crocetin glucosyltransferase involved in the synthesis of crocin, one of the apocarotenoids responsible for the color and bitter taste of saffron. Crocus sativus (taxid: 82528) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 7 EC: 1 |
| >sp|Q9SKC1|U74C1_ARATH UDP-glycosyltransferase 74C1 OS=Arabidopsis thaliana GN=UGT74C1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 368 bits (944), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/457 (40%), Positives = 282/457 (61%), Gaps = 11/457 (2%)
Query: 3 NQRERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATL---ATTHYTVKSIHATTVGVEP 59
++ ++ HVL YP QGHINP++Q AKRL+ K + +TL + H + ++ V
Sbjct: 2 SEAKKGHVLFFPYPLQGHINPMIQLAKRLSKKGITSTLIIASKDHREPYTSDDYSITVHT 61
Query: 60 ISDGFDEGGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDV 119
I DGF A V L+ F SR+L + I K S++P ++YD + +ALD+
Sbjct: 62 IHDGFFPHEHPHAKFVD--LDRFHNSTSRSLTDFISSAKLSDNPPKALIYDPFMPFALDI 119
Query: 120 ARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPL--TLPGLPSLASSDLPSFL 177
A+ +Y A T +Y+ IN G +PV++ P + PG P L+ DLPSF
Sbjct: 120 AKDLDLYVVAYFTQPWLASLVYYHINEGTYDVPVDRHENPTLASFPGFPLLSQDDLPSFA 179
Query: 178 AQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAYL 237
+ S P ++ QF +L + D +LCN+F++LE ++++ M WP+ IGP+VPS +L
Sbjct: 180 CEKGSYPLLHEFVVRQFSNLLQADCILCNTFDQLEPKVVKWMNDQWPVKNIGPVVPSKFL 239
Query: 238 DQQIAGDSAYGANIWEPTGDQ-CMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKA 296
D ++ D Y + D+ ++WL +P KSV+YV+FG++ ++ Q+ EIA +
Sbjct: 240 DNRLPEDKDYELENSKTEPDESVLKWLGNRPAKSVVYVAFGTLVALSEKQMKEIAMAISQ 299
Query: 297 SEKPFLWVVKENE-NKLPVEFVNSVGE--TGLVVRWCNQFEVLAHQAVGCFITHCGWNSI 353
+ FLW V+E+E +KLP F+ E +GLV +W Q EVLAH+++GCF++HCGWNS
Sbjct: 300 TGYHFLWSVRESERSKLPSGFIEEAEEKDSGLVAKWVPQLEVLAHESIGCFVSHCGWNST 359
Query: 354 LEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGE 413
LE L LGV +V VPQ++DQPTNAKF+E+VW++GVR + + G+ + EE+ +C+ EVM+GE
Sbjct: 360 LEALCLGVPMVGVPQWTDQPTNAKFIEDVWKIGVRVRTDGEGLSSKEEIARCIVEVMEGE 419
Query: 414 RSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRL 450
R ++I++NV K + A++A+S GGSSDK IDEFV L
Sbjct: 420 RGKEIRKNVEKLKVLAREAISEGGSSDKKIDEFVALL 456
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q41819|IABG_MAIZE Indole-3-acetate beta-glucosyltransferase OS=Zea mays GN=IAGLU PE=1 SV=1 | Back alignment and function description |
|---|
Score = 358 bits (920), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 201/459 (43%), Positives = 271/459 (59%), Gaps = 21/459 (4%)
Query: 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKS--IHATTVGVEPISDGFDE 66
HVLV+ +P QGH+NP++QFAKRLASK V TL TT + ++ + A VE ISDG DE
Sbjct: 4 HVLVVPFPGQGHMNPMVQFAKRLASKGVATTLVTTRFIQRTADVDAHPAMVEAISDGHDE 63
Query: 67 GGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIY 126
GGF A V YLE S +LA ++ S C+VYDS W L VAR+ G+
Sbjct: 64 GGFASAAGVAEYLEKQAAAASASLASLVEARASSADAFTCVVYDSYEDWVLPVARRMGLP 123
Query: 127 GAAMMTNSASVCSMYWQINHGLLTLP-----------VNQETVPLTLPGLPSLASSDLPS 175
T S +V ++Y+ + G L +P + GLP + S+LPS
Sbjct: 124 AVPFSTQSCAVSAVYYHFSQGRLAVPPGAAADGSDGGAGAAALSEAFLGLPEMERSELPS 183
Query: 176 FLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVP-- 233
F+ P ++QF K+DWVL NSFEELE E+L + IGP VP
Sbjct: 184 FVFDHGPYPTIAMQAIKQFAHAGKDDWVLFNSFEELETEVLAGLTKYLKARAIGPCVPLP 243
Query: 234 SAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARG 293
+A G YGAN+ +P D C +WL TKP++SV YVSFGS+A + Q +E+ARG
Sbjct: 244 TAGRTAGANGRITYGANLVKPE-DACTKWLDTKPDRSVAYVSFGSLASLGNAQKEELARG 302
Query: 294 LKASEKPFLWVVK-ENENKLPVEFVNSVGETG--LVVRWCNQFEVLAHQAVGCFITHCGW 350
L A+ KPFLWVV+ +E+++P + TG +VV WC Q +VLAH AVGCF+THCGW
Sbjct: 303 LLAAGKPFLWVVRASDEHQVPRYLLAEATATGAAMVVPWCPQLDVLAHPAVGCFVTHCGW 362
Query: 351 NSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNR-AGIVTGEELNKCVNEV 409
NS LE LS GV +VA+ ++DQPTNA+ VE W GVRA+++ AG+ E+ +CV V
Sbjct: 363 NSTLEALSFGVPMVAMALWTDQPTNARNVELAWGAGVRARRDAGAGVFLRGEVERCVRAV 422
Query: 410 MD-GERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFV 447
MD GE + ++ +WR+ A+ AV+ GGSSD+N+DEFV
Sbjct: 423 MDGGEAASAARKAAGEWRDRARAAVAPGGSSDRNLDEFV 461
|
Zea mays (taxid: 4577) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 2 EC: 1 |
| >sp|Q9LR44|U75B1_ARATH UDP-glycosyltransferase 75B1 OS=Arabidopsis thaliana GN=UGT75B1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 301 bits (771), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 173/464 (37%), Positives = 256/464 (55%), Gaps = 45/464 (9%)
Query: 9 HVLVLTYPAQGHINPLLQFAKRLASKR-VKATLATT----HYTVKSIH--ATTVGVEPIS 61
H L++T+PAQGH+NP L+FA+RL + + T T H ++ + H + S
Sbjct: 5 HFLLVTFPAQGHVNPSLRFARRLIKRTGARVTFVTCVSVFHNSMIANHNKVENLSFLTFS 64
Query: 62 DGFDEGGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVAR 121
DGFD+GG + + K G + L++ I K+ +SPV C++Y LL WA VAR
Sbjct: 65 DGFDDGGISTYEDRQKRSVNLKVNGDKALSDFIEATKNGDSPVTCLIYTILLNWAPKVAR 124
Query: 122 QFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPGLPSLASSDLPSFLAQPA 181
+F + A + A V ++Y+ G ++ LP L SL DLPSFL
Sbjct: 125 RFQLPSALLWIQPALVFNIYYTHFMGNKSV--------FELPNLSSLEIRDLPSFLTPSN 176
Query: 182 SNPAYLAAILEQFGSLNKNDW--VLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAYLDQ 239
+N A E L K +L N+F+ LE E L A + +V +GPL+P+
Sbjct: 177 TNKGAYDAFQEMMEFLIKETKPKILINTFDSLEPEALTAFPNI-DMVAVGPLLPT----- 230
Query: 240 QIAGDSAYGANIWEPTGDQCMR---WLATKPEKSVIYVSFGSMADIAANQVDEIARGLKA 296
+ + + DQ WL +K E SVIYVSFG+M +++ Q++E+AR L
Sbjct: 231 -----EIFSGSTNKSVKDQSSSYTLWLDSKTESSVIYVSFGTMVELSKKQIEELARALIE 285
Query: 297 SEKPFLWVVKENENKLPVE-------------FVNSVGETGLVVRWCNQFEVLAHQAVGC 343
++PFLWV+ + N+ F + + E G++V WC+Q EVL+H+AVGC
Sbjct: 286 GKRPFLWVITDKSNRETKTEGEEETEIEKIAGFRHELEEVGMIVSWCSQIEVLSHRAVGC 345
Query: 344 FITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELN 403
F+THCGW+S LE L LGV VVA P +SDQPTNAK +EE W+ GVR ++N+ G+V E+
Sbjct: 346 FVTHCGWSSTLESLVLGVPVVAFPMWSDQPTNAKLLEESWKTGVRVRENKDGLVERGEIR 405
Query: 404 KCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFV 447
+C+ VM+ E+S +++ N KW+ A +A GGSSDKN++ FV
Sbjct: 406 RCLEAVME-EKSVELRENAKKWKRLAMEAGREGGSSDKNMEAFV 448
|
Possesses low catalytic activity on indole-3-acetic acid (IAA) in vitro. May transfer UDP-glucose from sucrose synthase to callose synthase for the synthesis of callose at the forming cell plate during cytokinesis. Has high affinity for 4-aminobenzoate. Catalyzes the formation of 4-aminobenzoate glucose ester which represents a storage form of 4-aminobenzoate in the vacuole. Is the major source of this activity in the plant. Also active in vitro on benzoates and benzoate derivatives. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 2 EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 459 | ||||||
| 224133444 | 454 | predicted protein [Populus trichocarpa] | 0.982 | 0.993 | 0.708 | 0.0 | |
| 225457128 | 457 | PREDICTED: UDP-glycosyltransferase 74B1 | 0.986 | 0.991 | 0.674 | 0.0 | |
| 225424752 | 458 | PREDICTED: UDP-glycosyltransferase 74B1 | 0.980 | 0.982 | 0.600 | 1e-154 | |
| 357486127 | 466 | N-hydroxythioamide S-beta-glucosyltransf | 0.986 | 0.972 | 0.554 | 1e-152 | |
| 356498018 | 465 | PREDICTED: UDP-glycosyltransferase 74B1- | 1.0 | 0.987 | 0.559 | 1e-151 | |
| 357486123 | 627 | UDP-glucose glucosyltransferase [Medicag | 0.973 | 0.712 | 0.562 | 1e-151 | |
| 297733834 | 404 | unnamed protein product [Vitis vinifera] | 0.871 | 0.990 | 0.588 | 1e-151 | |
| 255558386 | 471 | UDP-glucosyltransferase, putative [Ricin | 0.991 | 0.966 | 0.560 | 1e-150 | |
| 388497344 | 466 | unknown [Medicago truncatula] | 0.986 | 0.972 | 0.546 | 1e-149 | |
| 147795873 | 448 | hypothetical protein VITISV_041748 [Viti | 0.958 | 0.982 | 0.589 | 1e-149 |
| >gi|224133444|ref|XP_002321569.1| predicted protein [Populus trichocarpa] gi|222868565|gb|EEF05696.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 682 bits (1759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/453 (70%), Positives = 377/453 (83%), Gaps = 2/453 (0%)
Query: 1 MENQRERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPI 60
M+N++ HV+VLTYPAQGHINPLLQFAKRLASK +KATLATT+YTV SI A TVGVEPI
Sbjct: 1 MDNKKS--HVIVLTYPAQGHINPLLQFAKRLASKGLKATLATTYYTVNSIDAPTVGVEPI 58
Query: 61 SDGFDEGGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVA 120
SDGFDEGGFKQA S+ YLESFKTVGSRTL E++ K+K S SPVNC+VYDS+L WALDVA
Sbjct: 59 SDGFDEGGFKQASSLDVYLESFKTVGSRTLTELVFKFKASGSPVNCVVYDSMLPWALDVA 118
Query: 121 RQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPGLPSLASSDLPSFLAQP 180
R GIY AA MT SASVCSMYW+I+ GLL+LP+ Q+T ++LPGLP L DLPSFLA+P
Sbjct: 119 RDLGIYAAAFMTTSASVCSMYWRIDLGLLSLPLKQQTATVSLPGLPPLGCCDLPSFLAEP 178
Query: 181 ASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAYLDQQ 240
S AYL I+E+F SLN++DWV CNSFE+LE EL++AM G WPLVM+GP+VPSAYLDQQ
Sbjct: 179 TSQTAYLEVIMEKFHSLNEDDWVFCNSFEDLEIELVKAMRGKWPLVMVGPMVPSAYLDQQ 238
Query: 241 IAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKP 300
I GD AYGA++W+PT QC WL TKP +SVIYVSFGSM +I+A QV+EIA GLKAS +P
Sbjct: 239 IDGDRAYGASLWKPTSSQCFTWLDTKPPRSVIYVSFGSMGNISAEQVEEIAWGLKASNRP 298
Query: 301 FLWVVKENENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLG 360
FLWV+KE+E KLP F+NSVGETG+VV WCNQ EVLAHQA+GCF+THCGWNS LEGL LG
Sbjct: 299 FLWVMKESEKKLPTGFLNSVGETGMVVSWCNQLEVLAHQAIGCFVTHCGWNSTLEGLGLG 358
Query: 361 VAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKR 420
V +V V + SDQP NAKFVE+VW+VGVRAKK+ GIVT EEL KC+ VMDGE ++IKR
Sbjct: 359 VPMVCVTERSDQPMNAKFVEDVWKVGVRAKKDEVGIVTREELEKCIRGVMDGENGEEIKR 418
Query: 421 NVSKWREFAKKAVSAGGSSDKNIDEFVVRLLKA 453
N +KWRE A+ AVS GGSSD NI+EFVV+LL+
Sbjct: 419 NANKWRELARSAVSVGGSSDMNINEFVVKLLEG 451
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225457128|ref|XP_002280305.1| PREDICTED: UDP-glycosyltransferase 74B1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 651 bits (1680), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/454 (67%), Positives = 370/454 (81%), Gaps = 1/454 (0%)
Query: 4 QRERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDG 63
+++ HV+VLTYPAQGHINPLLQF+KRLASK +KATLATTHYTV I + VGVE ISDG
Sbjct: 2 EKQGGHVMVLTYPAQGHINPLLQFSKRLASKGLKATLATTHYTVNFIQSDAVGVEAISDG 61
Query: 64 FDEGGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQF 123
FDEGGF QAPS++AYLESF+ VGSRT+ E+ILK+ +S SPV+C+VYDS+L W L VARQF
Sbjct: 62 FDEGGFMQAPSLEAYLESFQAVGSRTVGELILKFNESASPVDCLVYDSILPWGLSVARQF 121
Query: 124 GIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPGLPSLASSDLPSFLAQPASN 183
GIYGAA T SASVCSMYWQ+ G+L+LPV QE VP+++PGLP L SDLP FLAQP
Sbjct: 122 GIYGAAFWTTSASVCSMYWQLRQGVLSLPVKQEPVPVSMPGLPPLRLSDLPDFLAQPGHL 181
Query: 184 PAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAYLDQQIAG 243
AY++A++EQ +L +NDWV NSF+ LE EL++AM GLW + MIGP+VPSAYLDQQI G
Sbjct: 182 SAYMSAVMEQISTLEQNDWVFMNSFDALESELVKAMSGLWSVAMIGPMVPSAYLDQQIEG 241
Query: 244 DSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLW 303
D+ YGA++W+PT D+C+ WL TKP KSV+Y+SFGSMA+I QV+EIA GLK S+ F+W
Sbjct: 242 DTVYGASLWKPTNDECLGWLETKPPKSVVYISFGSMAEIPVKQVEEIAWGLKESDYHFIW 301
Query: 304 VVKENEN-KLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVA 362
VVKE+E+ KLP+ F+NS+ ETGLVV WCNQ EVLAH+AVGCF+THCGWNSILEGLSLGV
Sbjct: 302 VVKESESGKLPINFLNSMNETGLVVTWCNQLEVLAHKAVGCFVTHCGWNSILEGLSLGVP 361
Query: 363 VVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNV 422
+V +PQ DQPTNAKFVE+VW GVRA+K+ GIVT +EL KC+ E+M GERS++IKRN
Sbjct: 362 MVGMPQRVDQPTNAKFVEDVWRAGVRAQKDEEGIVTRKELEKCIKEIMVGERSEEIKRNA 421
Query: 423 SKWREFAKKAVSAGGSSDKNIDEFVVRLLKADGK 456
WR+ AK AVS GGSSDKN DEFV LLK K
Sbjct: 422 CMWRQSAKSAVSKGGSSDKNTDEFVGVLLKRGKK 455
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225424752|ref|XP_002267665.1| PREDICTED: UDP-glycosyltransferase 74B1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 271/451 (60%), Positives = 349/451 (77%), Gaps = 1/451 (0%)
Query: 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDE 66
R HV+V+ YP+QGHINPLLQFAKRLASK VKATLATT YTV I A +GVEPISDGFDE
Sbjct: 4 RGHVVVVPYPSQGHINPLLQFAKRLASKGVKATLATTRYTVNFIRAPNIGVEPISDGFDE 63
Query: 67 GGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIY 126
GGF QA YL +FK GSRTL+++I K++ + P+NC++YDS L WAL+VAR+ GI+
Sbjct: 64 GGFAQAGKEDVYLNAFKANGSRTLSQLIHKHQHTTHPINCVLYDSFLPWALNVAREHGIH 123
Query: 127 GAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPGLPSLASSDLPSFLAQPASNPAY 186
GAA TNSA+VC+++ +I+HGLLTLPV E PL LPGLP L DLP+F+ P S PAY
Sbjct: 124 GAAFFTNSATVCAIFCRIHHGLLTLPVKLEDTPLLLPGLPPLNFPDLPTFVKFPESYPAY 183
Query: 187 LAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAYLDQQIAGDSA 246
L L Q+ +L+ DWV+ NSFEELE E +++ LWP +++GP+VPSAYLD +I GD
Sbjct: 184 LTMKLSQYSNLDNVDWVIGNSFEELEGEAAKSISELWPGMLVGPMVPSAYLDGRIDGDKG 243
Query: 247 YGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVK 306
YGA++W+P D+C++WL K +SV+YVSFGSM ++A Q++EIA GLKAS + FLWVVK
Sbjct: 244 YGASLWKPLSDKCIKWLEKKAPQSVVYVSFGSMVSLSAKQMEEIAWGLKASGQHFLWVVK 303
Query: 307 ENE-NKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVA 365
E+E +KLP F++S E GL+V WCNQ E+LAH+A+GCF++HCGWNS LEGLSLGV +V
Sbjct: 304 ESERSKLPEGFIDSAEEQGLIVTWCNQLEMLAHEAIGCFVSHCGWNSTLEGLSLGVPMVG 363
Query: 366 VPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKW 425
VPQ++DQ T+AKFVEE+WEVGVRAK++ GIV EL C+ EVM G+RS++IKRN KW
Sbjct: 364 VPQWTDQHTDAKFVEEIWEVGVRAKEDELGIVRRGELLMCLKEVMVGKRSEEIKRNAGKW 423
Query: 426 REFAKKAVSAGGSSDKNIDEFVVRLLKADGK 456
R AK+A+S GGSSD+ I++FV +L+ A K
Sbjct: 424 RRLAKEAISEGGSSDQCINQFVEQLMSAAKK 454
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357486127|ref|XP_003613351.1| N-hydroxythioamide S-beta-glucosyltransferase [Medicago truncatula] gi|355514686|gb|AES96309.1| N-hydroxythioamide S-beta-glucosyltransferase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 253/456 (55%), Positives = 340/456 (74%), Gaps = 3/456 (0%)
Query: 2 ENQRERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPIS 61
+N VHVLV+ YPAQGHI+PL+QF+KRL SK +K T ATTHYTVKSI A + VEPIS
Sbjct: 6 QNYNNNVHVLVIPYPAQGHISPLIQFSKRLVSKGIKTTFATTHYTVKSITAPNISVEPIS 65
Query: 62 DGFDEGGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVAR 121
DGFDE GF QA +V+ +L SFKT GS+TL+ +I K++ + +P+ CIVYDS L WALDVA+
Sbjct: 66 DGFDESGFSQAKNVELFLNSFKTNGSKTLSNLIQKHQKTSTPITCIVYDSFLPWALDVAK 125
Query: 122 QFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPGLPSLASSDLPSFLAQPA 181
Q IYGAA TNSA+VC+++ +I+HGL+ PV++ +PL +PGLP L S DLPSF+ P
Sbjct: 126 QHRIYGAAFFTNSAAVCNIFCRIHHGLIETPVDE--LPLIVPGLPPLNSRDLPSFIRFPE 183
Query: 182 SNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAYLDQQI 241
S PAY+A L QF +LN+ DW+ N+FE LE E+++ + ++P +IGP+VPSAYLD +I
Sbjct: 184 SYPAYMAMKLNQFSNLNQADWMFVNTFEALEAEVVKGLTEMFPAKLIGPMVPSAYLDGRI 243
Query: 242 AGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPF 301
GD YGAN+W+P + C+ WL KP +SV+Y+SFGSM + + Q++E+A GLK SE F
Sbjct: 244 KGDKGYGANLWKPLSEDCINWLNAKPSQSVVYISFGSMVSLTSEQIEELALGLKESEVNF 303
Query: 302 LWVVKENEN-KLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLG 360
LWV++E+E KLP + +S+ E G++V WCNQ E+LAH AVGCF+THCGWNS LE LSLG
Sbjct: 304 LWVLRESEQGKLPKGYKDSIKEKGIIVTWCNQLELLAHDAVGCFVTHCGWNSTLESLSLG 363
Query: 361 VAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKR 420
V VV +PQ++DQ +AKF+EE+WEVGVR K++ G+V EE + VM+ ERS+ I+R
Sbjct: 364 VPVVCLPQWADQLPDAKFLEEIWEVGVRPKEDENGVVKREEFMLSLKVVMESERSEVIRR 423
Query: 421 NVSKWREFAKKAVSAGGSSDKNIDEFVVRLLKADGK 456
N S+W++ A+ AV GGSSDKNI++FV L + K
Sbjct: 424 NASEWKKLARDAVCEGGSSDKNINQFVDYLTNTNMK 459
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356498018|ref|XP_003517852.1| PREDICTED: UDP-glycosyltransferase 74B1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 543 bits (1398), Expect = e-151, Method: Compositional matrix adjust.
Identities = 259/463 (55%), Positives = 346/463 (74%), Gaps = 4/463 (0%)
Query: 1 MENQRER-VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEP 59
M +QR+ +HVLVL YPAQGHINPL+QFAKRLASK VKAT+ATTHYT SI+A + VE
Sbjct: 1 MVHQRQNNIHVLVLPYPAQGHINPLVQFAKRLASKGVKATVATTHYTANSINAPNITVEA 60
Query: 60 ISDGFDEGGFKQAPS-VKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALD 118
ISDGFD+ GF Q + V+ +L SF+T GSRTL+E+I K++ + SPV CIVYDS W LD
Sbjct: 61 ISDGFDQAGFAQTNNNVQLFLASFRTNGSRTLSELIRKHQQTPSPVTCIVYDSFFPWVLD 120
Query: 119 VARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPGLPSLASSDLPSFLA 178
VA+Q GIYGAA TNSA+VC+++ +++HG + LPV E +PL +PGLP L S LPSF+
Sbjct: 121 VAKQHGIYGAAFFTNSAAVCNIFCRLHHGFIQLPVKMEHLPLRVPGLPPLDSRALPSFVR 180
Query: 179 QPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAYLD 238
P S PAY+A L QF +LN DW+ N+FE LE E+L+ + L+P MIGP+VPS YLD
Sbjct: 181 FPESYPAYMAMKLSQFSNLNNADWMFVNTFEALESEVLKGLTELFPAKMIGPMVPSGYLD 240
Query: 239 QQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASE 298
+I GD YGA++W+P ++C WL +KP +SV+Y+SFGSM + Q++E+A GLK S
Sbjct: 241 GRIKGDKGYGASLWKPLTEECSNWLESKPPQSVVYISFGSMVSLTEEQMEEVAWGLKESG 300
Query: 299 KPFLWVVKENEN-KLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGL 357
FLWV++E+E+ KLP + SV + GL+V WCNQ E+LAHQA GCF+THCGWNS LE L
Sbjct: 301 VSFLWVLRESEHGKLPCGYRESVKDKGLIVTWCNQLELLAHQATGCFVTHCGWNSTLESL 360
Query: 358 SLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQK 417
SLGV VV +PQ++DQ +AKF++E+WEVGV K++ GIV +E + + +VM+G+RSQ+
Sbjct: 361 SLGVPVVCLPQWADQLPDAKFLDEIWEVGVWPKEDEKGIVRKQEFVQSLKDVMEGQRSQE 420
Query: 418 IKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLLKADGK-SLN 459
I+RN +KW++ A++AV GGSSDK+I++FV L+ AD SLN
Sbjct: 421 IRRNANKWKKLAREAVGEGGSSDKHINQFVDHLMNADKNGSLN 463
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357486123|ref|XP_003613349.1| UDP-glucose glucosyltransferase [Medicago truncatula] gi|355514684|gb|AES96307.1| UDP-glucose glucosyltransferase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 253/450 (56%), Positives = 338/450 (75%), Gaps = 3/450 (0%)
Query: 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDEG 67
VHVLV+ YPAQGHI+PL+QF+KRL SK +K T ATTHYTV+SI A V VEPISDGFDE
Sbjct: 10 VHVLVIPYPAQGHISPLIQFSKRLVSKGIKTTFATTHYTVQSITAPNVSVEPISDGFDES 69
Query: 68 GFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYG 127
GF QA +V+ +L SFKT GS +L+ +I KY+ + +P+ CIVYDS L WALDVA+Q GIYG
Sbjct: 70 GFTQANNVELFLTSFKTNGSNSLSNIIQKYQKTSTPITCIVYDSFLPWALDVAKQHGIYG 129
Query: 128 AAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPGLPSLASSDLPSFLAQPASNPAYL 187
AA TNSA+VC+++ +I+HGL+ +PV++ +PL +P LP L S DLPSF+ P S PAY+
Sbjct: 130 AAFFTNSAAVCNIFCRIHHGLIEIPVDE--LPLVVPDLPPLNSRDLPSFIRFPESYPAYM 187
Query: 188 AAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAYLDQQIAGDSAY 247
A L QF +L++ DW+ N+FE LE E+++ + L+P MIGP+VPSAYLD +I GD Y
Sbjct: 188 AMKLSQFSNLDQADWMFVNTFEALEGEVVKGLTELFPAKMIGPMVPSAYLDGRIKGDKGY 247
Query: 248 GANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKE 307
GAN+W+P + C+ WL +KP +SV+Y+SFGSM + + Q++E+A GLK SE FLWV++E
Sbjct: 248 GANLWKPLSEYCINWLNSKPSQSVVYISFGSMVSLTSEQIEELALGLKESEVNFLWVLRE 307
Query: 308 NEN-KLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAV 366
E KLP + + + E G++V WCNQ E+LAH AVGCF+THCGWNS LE LSLGV VV +
Sbjct: 308 LEQGKLPKGYKDFIKEKGIIVTWCNQLELLAHDAVGCFVTHCGWNSTLESLSLGVPVVCL 367
Query: 367 PQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWR 426
PQ++DQ +AKF+EE+WEVGVR K++ G+V EE + VM+ ERS+ I+RN S+W+
Sbjct: 368 PQWADQLPDAKFLEEIWEVGVRPKEDENGVVKREEFMLSLKVVMESERSEVIRRNASEWK 427
Query: 427 EFAKKAVSAGGSSDKNIDEFVVRLLKADGK 456
+ A+ AVS GSS+KNIDEFV L+ + K
Sbjct: 428 KLARDAVSERGSSNKNIDEFVDHLMNTNKK 457
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297733834|emb|CBI15081.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 267/454 (58%), Positives = 325/454 (71%), Gaps = 54/454 (11%)
Query: 4 QRERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDG 63
+++ HV+VLTYPAQGHINPLLQF+KRLASK +KATLATTHYTV I + VGVE ISDG
Sbjct: 2 EKQGGHVMVLTYPAQGHINPLLQFSKRLASKGLKATLATTHYTVNFIQSDAVGVEAISDG 61
Query: 64 FDEGGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQF 123
FDEGGF QAPS++AYLESF+ VGSRT+ E+ILK+ +S SPV+C+VYDS+L W L VARQF
Sbjct: 62 FDEGGFMQAPSLEAYLESFQAVGSRTVGELILKFNESASPVDCLVYDSILPWGLSVARQF 121
Query: 124 GIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPGLPSLASSDLPSFLAQPASN 183
GIYGAA T SASVCSMYWQ+ G+L+LPV QE VP+++PGLP L SDLP FLAQP
Sbjct: 122 GIYGAAFWTTSASVCSMYWQLRQGVLSLPVKQEPVPVSMPGLPPLRLSDLPDFLAQPGHL 181
Query: 184 PAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAYLDQQIAG 243
AY++A++EQ +L +NDWV NSF+ LE EL++AM GLW + MIGP+VPSAYLDQQI G
Sbjct: 182 SAYMSAVMEQISTLEQNDWVFMNSFDALESELVKAMSGLWSVAMIGPMVPSAYLDQQIEG 241
Query: 244 DSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLW 303
D+ YGA++W+PT D+C+ WL TKP KSV+Y+SFGSMA+I QV+EIA GLK S+ F+W
Sbjct: 242 DTVYGASLWKPTNDECLGWLETKPPKSVVYISFGSMAEIPVKQVEEIAWGLKESDYHFIW 301
Query: 304 VVKENEN-KLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVA 362
VVKE+E+ KLP+ F+NS+ ETGLVV WCNQ EVLAH+AVG
Sbjct: 302 VVKESESGKLPINFLNSMNETGLVVTWCNQLEVLAHKAVG-------------------- 341
Query: 363 VVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNV 422
IVT +EL KC+ E+M GERS++IKRN
Sbjct: 342 ---------------------------------IVTRKELEKCIKEIMVGERSEEIKRNA 368
Query: 423 SKWREFAKKAVSAGGSSDKNIDEFVVRLLKADGK 456
WR+ AK AVS GGSSDKN DEFV LLK K
Sbjct: 369 CMWRQSAKSAVSKGGSSDKNTDEFVGVLLKRGKK 402
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255558386|ref|XP_002520220.1| UDP-glucosyltransferase, putative [Ricinus communis] gi|223540712|gb|EEF42275.1| UDP-glucosyltransferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 256/457 (56%), Positives = 337/457 (73%), Gaps = 2/457 (0%)
Query: 2 ENQRERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPIS 61
E + HV+VL YP QGHINPLLQFAKRLASK VK T ATTHYTV SI A V V IS
Sbjct: 3 EETEYKGHVVVLPYPGQGHINPLLQFAKRLASKGVKITFATTHYTVNSICAPNVTVHAIS 62
Query: 62 DGFDEGGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVAR 121
DGFDEGGF QA V YL+SFK GSRTL+ +I K++DS PVNCIVYDS L WALDVAR
Sbjct: 63 DGFDEGGFAQAQEVDLYLKSFKANGSRTLSHLIQKFQDSNFPVNCIVYDSFLPWALDVAR 122
Query: 122 QFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPGLPSLA-SSDLPSFLAQP 180
Q GI+GA TNSA+V S++ +++HG L+LP++ E L SDLP+FL P
Sbjct: 123 QHGIFGAPFFTNSAAVSSIFCRLHHGFLSLPLDVEGDKPLLLPGLPPLYYSDLPTFLKIP 182
Query: 181 ASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAYLDQQ 240
S PAYLA L QF +L+ DW+ N+FEELE +++ + LWP +IGP+VPS+YLD +
Sbjct: 183 ESYPAYLAMKLNQFSNLDMADWIFANTFEELESKVVGGVSKLWPAKLIGPMVPSSYLDGR 242
Query: 241 IAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKP 300
I GD YGA++W+P G++C++WL TK +SV+Y+SFGSM + Q++EIA GLK S
Sbjct: 243 IDGDKGYGASLWKPLGEECLKWLETKQPQSVVYISFGSMVSLTVKQMEEIAWGLKESNLN 302
Query: 301 FLWVVKENE-NKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSL 359
FLWVV+E+E +KLP F++S + GL+VRWCNQ E+LAHQA+GCF++HCGWNS LE LSL
Sbjct: 303 FLWVVRESEMDKLPKGFIDSTSDKGLIVRWCNQLEMLAHQAIGCFVSHCGWNSTLEALSL 362
Query: 360 GVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIK 419
GV++VA+PQ++DQ NAKF+EE+W+VGVR K + G+V +E+ +C+ EVM+G++S++IK
Sbjct: 363 GVSMVAIPQWADQLPNAKFIEEIWKVGVRGKVDERGVVRKQEVIRCLKEVMEGKKSEEIK 422
Query: 420 RNVSKWREFAKKAVSAGGSSDKNIDEFVVRLLKADGK 456
++ KWR+ A++ GGSSDKNI++FV L A+ K
Sbjct: 423 KHARKWRQVAERTFDEGGSSDKNINDFVEHLAFANKK 459
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388497344|gb|AFK36738.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 249/456 (54%), Positives = 336/456 (73%), Gaps = 3/456 (0%)
Query: 2 ENQRERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPIS 61
+N VHVLV+ YPAQGHI+PL+QF+KRL K +K T ATTHYTVKSI A + VEPIS
Sbjct: 6 QNYNNNVHVLVIPYPAQGHISPLIQFSKRLVPKGIKTTFATTHYTVKSITAPNISVEPIS 65
Query: 62 DGFDEGGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVAR 121
DGFDE GF Q +V+ +L SFKT GS+TL+ +I K++ + +P+ CIVYDS L WALDVA+
Sbjct: 66 DGFDESGFSQTKNVELFLNSFKTNGSKTLSNLIQKHQKTSTPITCIVYDSFLPWALDVAK 125
Query: 122 QFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPGLPSLASSDLPSFLAQPA 181
Q IYGAA TNSA+VC+++ +I+HGL+ PV++ +PL +PGLP L S DLPSF+ P
Sbjct: 126 QHRIYGAAFFTNSAAVCNIFCRIHHGLIETPVDE--LPLIVPGLPPLNSRDLPSFIRFPE 183
Query: 182 SNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAYLDQQI 241
S PAY+A L QF +LN+ DW+ N+FE LE E+++ + ++P +IGP+VPSAYLD +I
Sbjct: 184 SYPAYMAMKLNQFSNLNQADWMFVNTFEALEAEVVKGLTEVFPAKLIGPMVPSAYLDGRI 243
Query: 242 AGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPF 301
GD YGAN+W+P + C+ WL KP +SV+Y+SFGSM + + Q++E+A GLK S F
Sbjct: 244 KGDKGYGANLWKPLSEDCINWLNAKPSQSVVYISFGSMVSLTSEQIEELALGLKESGVNF 303
Query: 302 LWVVKENEN-KLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLG 360
LWV++E+E KLP + +S+ E G++V WCNQ E+LAH AVGCF+THCGWNS LE LSLG
Sbjct: 304 LWVLRESEQGKLPKGYKDSIKEKGIIVTWCNQLELLAHDAVGCFVTHCGWNSTLESLSLG 363
Query: 361 VAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKR 420
V VV +PQ++DQ +AKF+EE+WEVGVR K++ G+V EE + VM+ E S+ I+R
Sbjct: 364 VPVVCLPQWADQLPDAKFLEEIWEVGVRPKEDENGVVKREEFMLSLKVVMESEGSEVIRR 423
Query: 421 NVSKWREFAKKAVSAGGSSDKNIDEFVVRLLKADGK 456
N S+W++ A+ AV GGSSDKNI++FV L + K
Sbjct: 424 NASEWKKLARDAVCEGGSSDKNINQFVDYLTNTNMK 459
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147795873|emb|CAN74227.1| hypothetical protein VITISV_041748 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 533 bits (1373), Expect = e-149, Method: Compositional matrix adjust.
Identities = 266/451 (58%), Positives = 343/451 (76%), Gaps = 11/451 (2%)
Query: 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDE 66
R HV+V+ YP+QGHINPLLQFAKRLASK VKATLATT YTV SI A +G
Sbjct: 4 RGHVVVVPYPSQGHINPLLQFAKRLASKGVKATLATTRYTVNSIRAPNIG---------- 53
Query: 67 GGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIY 126
GGF QA YL +FK GSRTL+++I K++ + P+NC++YDS L WALDVAR+ GI+
Sbjct: 54 GGFAQAGKEDVYLNAFKANGSRTLSQLIHKHQHTTHPINCVLYDSFLPWALDVAREHGIH 113
Query: 127 GAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPGLPSLASSDLPSFLAQPASNPAY 186
GAA TNSA+VC+++ +I+HGLLTLPV E PL LPGLP L DLP+F+ P S PAY
Sbjct: 114 GAAFFTNSATVCAIFCRIHHGLLTLPVKLEDTPLLLPGLPPLNFPDLPTFVKFPESYPAY 173
Query: 187 LAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAYLDQQIAGDSA 246
L L Q+ +L+K DWV+ NSFEELE E +++ LWP +++GP+VPSAYLD +I GD
Sbjct: 174 LTMKLSQYSNLDKVDWVIGNSFEELEGEAAKSISELWPGMLVGPMVPSAYLDGRIDGDKG 233
Query: 247 YGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVK 306
YGA++W+P D+C++WL TK +SV+YVSFGSM ++A Q++EIA GLKAS + FLWVVK
Sbjct: 234 YGASLWKPLSDKCIKWLETKAPQSVVYVSFGSMVSLSAKQMEEIAWGLKASGQHFLWVVK 293
Query: 307 ENE-NKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVA 365
E+E +KLP F++S E GL+V WCNQ E+LAH+A+GCF++HCGWNS LEGLSLGV +V
Sbjct: 294 ESERSKLPEGFIDSAEEQGLIVTWCNQLEMLAHEAIGCFVSHCGWNSTLEGLSLGVPMVG 353
Query: 366 VPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKW 425
VPQ++DQ T+AKFVEE+WEVGVRAK++ GIV EL C+ EVM G+RS++IKRN SKW
Sbjct: 354 VPQWTDQHTDAKFVEEIWEVGVRAKEDELGIVRRGELLMCLKEVMVGKRSEEIKRNASKW 413
Query: 426 REFAKKAVSAGGSSDKNIDEFVVRLLKADGK 456
R AK+A+S GGSSD+ I++FV +L+ A K
Sbjct: 414 RRLAKEAISEGGSSDQCINQFVEQLMSAAKK 444
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 459 | ||||||
| TAIR|locus:2032387 | 460 | UGT74B1 "UDP-glucosyl transfer | 0.956 | 0.954 | 0.483 | 1e-109 | |
| TAIR|locus:2043949 | 449 | UGT74F2 "UDP-glucosyltransfera | 0.949 | 0.971 | 0.458 | 5.1e-106 | |
| TAIR|locus:2044044 | 449 | UGT74F1 "UDP-glycosyltransfera | 0.949 | 0.971 | 0.442 | 6.7e-104 | |
| TAIR|locus:2031983 | 453 | UGT74E2 "AT1G05680" [Arabidops | 0.962 | 0.975 | 0.440 | 3.7e-103 | |
| TAIR|locus:2045238 | 456 | UGT74D1 "UDP-glucosyl transfer | 0.960 | 0.967 | 0.439 | 8.4e-97 | |
| TAIR|locus:2045268 | 457 | AT2G31790 [Arabidopsis thalian | 0.971 | 0.975 | 0.402 | 1.9e-92 | |
| TAIR|locus:2201031 | 469 | UGT75B1 "UDP-glucosyltransfera | 0.919 | 0.899 | 0.379 | 3.1e-76 | |
| TAIR|locus:2201066 | 455 | UGT75B2 "UDP-glucosyl transfer | 0.930 | 0.938 | 0.376 | 5.7e-75 | |
| TAIR|locus:2130205 | 490 | UGT84A1 "AT4G15480" [Arabidops | 0.947 | 0.887 | 0.349 | 1.8e-71 | |
| TAIR|locus:2129381 | 456 | AT4G14090 [Arabidopsis thalian | 0.941 | 0.947 | 0.362 | 2.3e-71 |
| TAIR|locus:2032387 UGT74B1 "UDP-glucosyl transferase 74B1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1084 (386.6 bits), Expect = 1.0e-109, P = 1.0e-109
Identities = 220/455 (48%), Positives = 300/455 (65%)
Query: 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDE-- 66
HV++L YP QGH+NP++QFAKRL SK VK T+ATT YT SI ++ VEPISDGFD
Sbjct: 11 HVVILPYPVQGHLNPMVQFAKRLVSKNVKVTIATTTYTASSITTPSLSVEPISDGFDFIP 70
Query: 67 -G--GFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQF 123
G GF SV Y ESFK GS TL +I K+K ++SP++C++YDS L W L+VAR
Sbjct: 71 IGIPGF----SVDTYSESFKLNGSETLTLLIEKFKSTDSPIDCLIYDSFLPWGLEVARSM 126
Query: 124 GIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPGLPSLASSDLPSFLAQP-AS 182
+ A+ TN+ +VCS+ + ++G LP + + P + GLPSL+ +LPSF+ + +
Sbjct: 127 ELSAASFFTNNLTVCSVLRKFSNGDFPLPADPNSAPFRIRGLPSLSYDELPSFVGRHWLT 186
Query: 183 NPAYLAAILEQFGSLNKNDWVLCNSFEELEK--ELLRAMLGLWPLVMIGPLVPSAYLDQQ 240
+P + +L QF + DW+ N FE LE+ + +IGP++PSAYLD +
Sbjct: 187 HPEHGRVLLNQFPNHENADWLFVNGFEGLEETQDCENGESDAMKATLIGPMIPSAYLDDR 246
Query: 241 IAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKP 300
+ D YGA++ +P +CM WL TK +SV +VSFGS + Q+ E+A L+ S+
Sbjct: 247 MEDDKDYGASLLKPISKECMEWLETKQAQSVAFVSFGSFGILFEKQLAEVAIALQESDLN 306
Query: 301 FLWVVKENE-NKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSL 359
FLWV+KE KLP FV S + L+V WCNQ EVLAH+++GCF+THCGWNS LEGLSL
Sbjct: 307 FLWVIKEAHIAKLPEGFVESTKDRALLVSWCNQLEVLAHESIGCFLTHCGWNSTLEGLSL 366
Query: 360 GVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAG--IVTGEELNKCVNEVMDGERSQK 417
GV +V VPQ+SDQ +AKFVEEVW+VG RAK+ AG IV EEL +C+ VM+GE S K
Sbjct: 367 GVPMVGVPQWSDQMNDAKFVEEVWKVGYRAKEE-AGEVIVKSEELVRCLKGVMEGESSVK 425
Query: 418 IKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLLK 452
I+ + KW++ A KA+S GGSSD++I+EF+ L K
Sbjct: 426 IRESSKKWKDLAVKAMSEGGSSDRSINEFIESLGK 460
|
|
| TAIR|locus:2043949 UGT74F2 "UDP-glucosyltransferase 74F2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1049 (374.3 bits), Expect = 5.1e-106, P = 5.1e-106
Identities = 209/456 (45%), Positives = 299/456 (65%)
Query: 4 QRERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVG---VEPI 60
+ +R HVL + YP QGHI P QF KRL K +K TLA T + SI+ G + I
Sbjct: 2 EHKRGHVLAVPYPTQGHITPFRQFCKRLHFKGLKTTLALTTFVFNSINPDLSGPISIATI 61
Query: 61 SDGFDEGGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVA 120
SDG+D GGF+ A S+ YL+ FKT GS+T+A++I K++ S++P+ CIVYD+ L WALDVA
Sbjct: 62 SDGYDHGGFETADSIDDYLKDFKTSGSKTIADIIQKHQTSDNPITCIVYDAFLPWALDVA 121
Query: 121 RQFGIYGAAMMTNSASVCSMYW--QINHGLLTLPVNQETVPLTLPGLPSLASSDLPSFLA 178
R+FG+ T +V +Y+ IN+G L LP+ + LP L DLPSF +
Sbjct: 122 REFGLVATPFFTQPCAVNYVYYLSYINNGSLQLPIEE---------LPFLELQDLPSFFS 172
Query: 179 QPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAYLD 238
S PAY +L+QF + K D+VL NSF+ELE P++ IGP +PS YLD
Sbjct: 173 VSGSYPAYFEMVLQQFINFEKADFVLVNSFQELELHENELWSKACPVLTIGPTIPSIYLD 232
Query: 239 QQIAGDSAYGANIWEPTGDQ-CMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKAS 297
Q+I D+ Y N++E D C+ WL T+P+ SV+YV+FGSMA + Q++E+A + S
Sbjct: 233 QRIKSDTGYDLNLFESKDDSFCINWLDTRPQGSVVYVAFGSMAQLTNVQMEELASAV--S 290
Query: 298 EKPFLWVVKENEN-KLPVEFVNSVG-ETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILE 355
FLWVV+ +E KLP F+ +V E LV++W Q +VL+++A+GCF+THCGWNS +E
Sbjct: 291 NFSFLWVVRSSEEEKLPSGFLETVNKEKSLVLKWSPQLQVLSNKAIGCFLTHCGWNSTME 350
Query: 356 GLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNR-AGIVTGEELNKCVNEVMDGER 414
L+ GV +VA+PQ++DQP NAK++++VW+ GVR K + +GI EE+ + EVM+GER
Sbjct: 351 ALTFGVPMVAMPQWTDQPMNAKYIQDVWKAGVRVKTEKESGIAKREEIEFSIKEVMEGER 410
Query: 415 SQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRL 450
S+++K+NV KWR+ A K+++ GGS+D NID FV R+
Sbjct: 411 SKEMKKNVKKWRDLAVKSLNEGGSTDTNIDTFVSRV 446
|
|
| TAIR|locus:2044044 UGT74F1 "UDP-glycosyltransferase 74 F1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1029 (367.3 bits), Expect = 6.7e-104, P = 6.7e-104
Identities = 202/456 (44%), Positives = 306/456 (67%)
Query: 4 QRERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIH---ATTVGVEPI 60
++ R HVL + +P+QGHI P+ QF KRL SK K T T + +IH ++ + + I
Sbjct: 2 EKMRGHVLAVPFPSQGHITPIRQFCKRLHSKGFKTTHTLTTFIFNTIHLDPSSPISIATI 61
Query: 61 SDGFDEGGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVA 120
SDG+D+GGF A SV YL++FKT GS+T+A++I K++ +++P+ CIVYDS + WALD+A
Sbjct: 62 SDGYDQGGFSSAGSVPEYLQNFKTFGSKTVADIIRKHQSTDNPITCIVYDSFMPWALDLA 121
Query: 121 RQFGIYGAAMMTNSASVCSMYW--QINHGLLTLPVNQETVPLTLPGLPSLASSDLPSFLA 178
FG+ A T S +V + + IN+G LTLP+ LP L DLP+F+
Sbjct: 122 MDFGLAAAPFFTQSCAVNYINYLSYINNGSLTLPIKD---------LPLLELQDLPTFVT 172
Query: 179 QPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAYLD 238
S+ AY +L+QF + +K D+VL NSF +L+ + + + P++ IGP VPS YLD
Sbjct: 173 PTGSHLAYFEMVLQQFTNFDKADFVLVNSFHDLDLHVKELLSKVCPVLTIGPTVPSMYLD 232
Query: 239 QQIAGDSAYGANIWE-PTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKAS 297
QQI D+ Y N+++ C WL +PE SV+Y++FGSMA +++ Q++EIA + S
Sbjct: 233 QQIKSDNDYDLNLFDLKEAALCTDWLDKRPEGSVVYIAFGSMAKLSSEQMEEIASAI--S 290
Query: 298 EKPFLWVVKENE-NKLPVEFVNSVG-ETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILE 355
+LWVV+ +E +KLP F+ +V + LV++W Q +VL+++A+GCF+THCGWNS +E
Sbjct: 291 NFSYLWVVRASEESKLPPGFLETVDKDKSLVLKWSPQLQVLSNKAIGCFMTHCGWNSTME 350
Query: 356 GLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNR-AGIVTGEELNKCVNEVMDGER 414
GLSLGV +VA+PQ++DQP NAK++++VW+VGVR K + +GI EE+ + EVM+GE+
Sbjct: 351 GLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAEKESGICKREEIEFSIKEVMEGEK 410
Query: 415 SQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRL 450
S+++K N KWR+ A K++S GGS+D NI+EFV ++
Sbjct: 411 SKEMKENAGKWRDLAVKSLSEGGSTDININEFVSKI 446
|
|
| TAIR|locus:2031983 UGT74E2 "AT1G05680" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1022 (364.8 bits), Expect = 3.7e-103, P = 3.7e-103
Identities = 198/449 (44%), Positives = 296/449 (65%)
Query: 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHAT---TVGVEPIS 61
RE H++VL +P QGHI P+ QF KRLASK +K TL + T ++ V PIS
Sbjct: 2 REGSHLIVLPFPGQGHITPMSQFCKRLASKGLKLTLVLVSDKPSPPYKTEHDSITVFPIS 61
Query: 62 DGFDEGGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVAR 121
+GF EG + + Y+E +T TL +++ K S +P IVYDS + W LDVA
Sbjct: 62 NGFQEGE-EPLQDLDDYMERVETSIKNTLPKLVEDMKLSGNPPRAIVYDSTMPWLLDVAH 120
Query: 122 QFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQ--ETVPLTLPGLPSLASSDLPSFLAQ 179
+G+ GA T V ++Y+ + G ++P + + + P P L ++DLPSFL +
Sbjct: 121 SYGLSGAVFFTQPWLVTAIYYHVFKGSFSVPSTKYGHSTLASFPSFPMLTANDLPSFLCE 180
Query: 180 PASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAYLDQ 239
+S P L +++Q ++++ D VLCN+F++LE++LL+ + LWP++ IGP VPS YLD+
Sbjct: 181 SSSYPNILRIVVDQLSNIDRVDIVLCNTFDKLEEKLLKWVQSLWPVLNIGPTVPSMYLDK 240
Query: 240 QIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEK 299
+++ D YG +++ +CM WL +K SV+Y+SFGS+ + +Q+ E+A GLK S +
Sbjct: 241 RLSEDKNYGFSLFNAKVAECMEWLNSKEPNSVVYLSFGSLVILKEDQMLELAAGLKQSGR 300
Query: 300 PFLWVVKENE-NKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLS 358
FLWVV+E E +KLP +V +GE GL+V W Q +VLAH+++GCF+THCGWNS LEGLS
Sbjct: 301 FFLWVVRETETHKLPRNYVEEIGEKGLIVSWSPQLDVLAHKSIGCFLTHCGWNSTLEGLS 360
Query: 359 LGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKI 418
LGV ++ +P ++DQPTNAKF+++VW+VGVR K G V EE+ + V EVM+GE+ ++I
Sbjct: 361 LGVPMIGMPHWTDQPTNAKFMQDVWKVGVRVKAEGDGFVRREEIMRSVEEVMEGEKGKEI 420
Query: 419 KRNVSKWREFAKKAVSAGGSSDKNIDEFV 447
++N KW+ A++AVS GGSSDK+I+EFV
Sbjct: 421 RKNAEKWKVLAQEAVSEGGSSDKSINEFV 449
|
|
| TAIR|locus:2045238 UGT74D1 "UDP-glucosyl transferase 74D1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 962 (343.7 bits), Expect = 8.4e-97, P = 8.4e-97
Identities = 203/462 (43%), Positives = 290/462 (62%)
Query: 4 QRERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSI--HATTVGVE--- 58
++ + +VLV ++P QGHINPLLQF+KRL SK V T TT T SI A T G
Sbjct: 3 EKAKANVLVFSFPIQGHINPLLQFSKRLLSKNVNVTFLTTSSTHNSILRRAITGGATALP 62
Query: 59 ----PISDGFDEGGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLT 114
PI DGF+E + Y F+ SR+L+E+I + N +VYDS L
Sbjct: 63 LSFVPIDDGFEED-HPSTDTSPDYFAKFQENVSRSLSELI---SSMDPKPNAVVYDSCLP 118
Query: 115 WALDVARQF-GIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPGLPSLASSDL 173
+ LDV R+ G+ A+ T S++V + Y G N + LP +P L +DL
Sbjct: 119 YVLDVCRKHPGVAAASFFTQSSTVNATYIHFLRGEFKEFQND----VVLPAMPPLKGNDL 174
Query: 174 PSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVP 233
P FL I QF +++ D+ L NSF+ELE E+L+ M WP+ IGP++P
Sbjct: 175 PVFLYDNNLCRPLFELISSQFVNVDDIDFFLVNSFDELEVEVLQWMKNQWPVKNIGPMIP 234
Query: 234 SAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARG 293
S YLD+++AGD YG N++ ++C+ WL +KP SVIYVSFGS+A + +Q+ E+A G
Sbjct: 235 SMYLDKRLAGDKDYGINLFNAQVNECLDWLDSKPPGSVIYVSFGSLAVLKDDQMIEVAAG 294
Query: 294 LKASEKPFLWVVKENENK-LPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNS 352
LK + FLWVV+E E K LP ++ + + GL+V W Q +VLAH+++GCF+THCGWNS
Sbjct: 295 LKQTGHNFLWVVRETETKKLPSNYIEDICDKGLIVNWSPQLQVLAHKSIGCFMTHCGWNS 354
Query: 353 ILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMD- 411
LE LSLGVA++ +P +SDQPTNAKF+E+VW+VGVR K ++ G V EE+ +CV EVM+
Sbjct: 355 TLEALSLGVALIGMPAYSDQPTNAKFIEDVWKVGVRVKADQNGFVPKEEIVRCVGEVMED 414
Query: 412 -GERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLLK 452
E+ ++I++N + EFA++A+S GG+SDKNIDEFV ++++
Sbjct: 415 MSEKGKEIRKNARRLMEFAREALSDGGNSDKNIDEFVAKIVR 456
|
|
| TAIR|locus:2045268 AT2G31790 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 921 (329.3 bits), Expect = 1.9e-92, P = 1.9e-92
Identities = 184/457 (40%), Positives = 282/457 (61%)
Query: 3 NQRERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATL---ATTHYTVKSIHATTVGVEP 59
++ ++ HVL YP QGHINP++Q AKRL+ K + +TL + H + ++ V
Sbjct: 2 SEAKKGHVLFFPYPLQGHINPMIQLAKRLSKKGITSTLIIASKDHREPYTSDDYSITVHT 61
Query: 60 ISDGFDEGGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDV 119
I DGF A V L+ F SR+L + I K S++P ++YD + +ALD+
Sbjct: 62 IHDGFFPHEHPHAKFVD--LDRFHNSTSRSLTDFISSAKLSDNPPKALIYDPFMPFALDI 119
Query: 120 ARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPL--TLPGLPSLASSDLPSFL 177
A+ +Y A T +Y+ IN G +PV++ P + PG P L+ DLPSF
Sbjct: 120 AKDLDLYVVAYFTQPWLASLVYYHINEGTYDVPVDRHENPTLASFPGFPLLSQDDLPSFA 179
Query: 178 AQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAYL 237
+ S P ++ QF +L + D +LCN+F++LE ++++ M WP+ IGP+VPS +L
Sbjct: 180 CEKGSYPLLHEFVVRQFSNLLQADCILCNTFDQLEPKVVKWMNDQWPVKNIGPVVPSKFL 239
Query: 238 DQQIAGDSAYGANIWEPTGDQC-MRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKA 296
D ++ D Y + D+ ++WL +P KSV+YV+FG++ ++ Q+ EIA +
Sbjct: 240 DNRLPEDKDYELENSKTEPDESVLKWLGNRPAKSVVYVAFGTLVALSEKQMKEIAMAISQ 299
Query: 297 SEKPFLWVVKENE-NKLPVEFVNSVGE--TGLVVRWCNQFEVLAHQAVGCFITHCGWNSI 353
+ FLW V+E+E +KLP F+ E +GLV +W Q EVLAH+++GCF++HCGWNS
Sbjct: 300 TGYHFLWSVRESERSKLPSGFIEEAEEKDSGLVAKWVPQLEVLAHESIGCFVSHCGWNST 359
Query: 354 LEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGE 413
LE L LGV +V VPQ++DQPTNAKF+E+VW++GVR + + G+ + EE+ +C+ EVM+GE
Sbjct: 360 LEALCLGVPMVGVPQWTDQPTNAKFIEDVWKIGVRVRTDGEGLSSKEEIARCIVEVMEGE 419
Query: 414 RSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRL 450
R ++I++NV K + A++A+S GGSSDK IDEFV L
Sbjct: 420 RGKEIRKNVEKLKVLAREAISEGGSSDKKIDEFVALL 456
|
|
| TAIR|locus:2201031 UGT75B1 "UDP-glucosyltransferase 75B1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 768 (275.4 bits), Expect = 3.1e-76, P = 3.1e-76
Identities = 175/461 (37%), Positives = 264/461 (57%)
Query: 9 HVLVLTYPAQGHINPLLQFAKRLASKR-VKATLATT----HYTVKSIHATTVGVE--PIS 61
H L++T+PAQGH+NP L+FA+RL + + T T H ++ + H + S
Sbjct: 5 HFLLVTFPAQGHVNPSLRFARRLIKRTGARVTFVTCVSVFHNSMIANHNKVENLSFLTFS 64
Query: 62 DGFDEGGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVAR 121
DGFD+GG + + K G + L++ I K+ +SPV C++Y LL WA VAR
Sbjct: 65 DGFDDGGISTYEDRQKRSVNLKVNGDKALSDFIEATKNGDSPVTCLIYTILLNWAPKVAR 124
Query: 122 QFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPGLPSLASSDLPSFLAQPA 181
+F + A + A V ++Y+ H + ++V LP L SL DLPSFL
Sbjct: 125 RFQLPSALLWIQPALVFNIYY--THFM-----GNKSV-FELPNLSSLEIRDLPSFLTPSN 176
Query: 182 SNPAYLAAILEQFGSLNKNDW--VLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAYLDQ 239
+N A E L K +L N+F+ LE E L A + +V +GPL+P+ +
Sbjct: 177 TNKGAYDAFQEMMEFLIKETKPKILINTFDSLEPEALTAFPNI-DMVAVGPLLPT----E 231
Query: 240 QIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEK 299
+G + ++ + + + WL +K E SVIYVSFG+M +++ Q++E+AR L ++
Sbjct: 232 IFSGST--NKSVKDQSSSYTL-WLDSKTESSVIYVSFGTMVELSKKQIEELARALIEGKR 288
Query: 300 PFLWVVK---------ENENKLPVE----FVNSVGETGLVVRWCNQFEVLAHQAVGCFIT 346
PFLWV+ E E + +E F + + E G++V WC+Q EVL+H+AVGCF+T
Sbjct: 289 PFLWVITDKSNRETKTEGEEETEIEKIAGFRHELEEVGMIVSWCSQIEVLSHRAVGCFVT 348
Query: 347 HCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCV 406
HCGW+S LE L LGV VVA P +SDQPTNAK +EE W+ GVR ++N+ G+V E+ +C+
Sbjct: 349 HCGWSSTLESLVLGVPVVAFPMWSDQPTNAKLLEESWKTGVRVRENKDGLVERGEIRRCL 408
Query: 407 NEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFV 447
VM+ E+S +++ N KW+ A +A GGSSDKN++ FV
Sbjct: 409 EAVME-EKSVELRENAKKWKRLAMEAGREGGSSDKNMEAFV 448
|
|
| TAIR|locus:2201066 UGT75B2 "UDP-glucosyl transferase 75B2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 756 (271.2 bits), Expect = 5.7e-75, P = 5.7e-75
Identities = 175/465 (37%), Positives = 259/465 (55%)
Query: 9 HVLVLTYPAQGHINPLLQFAKRL---ASKRVK-AT-LATTHYTVKSIHATTVGVE--PIS 61
H L++T+PAQGH+NP L+FA+RL RV AT L+ H ++ H + S
Sbjct: 5 HFLLVTFPAQGHVNPSLRFARRLIKTTGARVTFATCLSVIHRSMIPNHNNVENLSFLTFS 64
Query: 62 DGFDEGGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVAR 121
DGFD+G V+ L F+ G + L++ I ++ +SPV+C++Y L W VAR
Sbjct: 65 DGFDDGVISNTDDVQNRLVHFERNGDKALSDFIEANQNGDSPVSCLIYTILPNWVPKVAR 124
Query: 122 QFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPGLPSLASSDLPSFLAQPA 181
+F + + A +Y+ + G N P LPSL DLPSFL+
Sbjct: 125 RFHLPSVHLWIQPAFAFDIYYNYSTG------NNSV--FEFPNLPSLEIRDLPSFLSPSN 176
Query: 182 SNPAYLAAILEQFGSLNK--NDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAYLDQ 239
+N A A E L + N +L N+F+ LE E L A+ + +V +GPL+P+
Sbjct: 177 TNKAAQAVYQELMDFLKEESNPKILVNTFDSLEPEFLTAIPNI-EMVAVGPLLPA----- 230
Query: 240 QIAGDSAYGANIW-EPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASE 298
+I S G ++ + WL +K E SVIYVSFG+M +++ Q++E+AR L
Sbjct: 231 EIFTGSESGKDLSRDHQSSSYTLWLDSKTESSVIYVSFGTMVELSKKQIEELARALIEGG 290
Query: 299 KPFLWVVK---------ENENKLPVE----FVNSVGETGLVVRWCNQFEVLAHQAVGCFI 345
+PFLWV+ E E + +E F + + E G++V WC+Q EVL H+A+GCF+
Sbjct: 291 RPFLWVITDKLNREAKIEGEEETEIEKIAGFRHELEEVGMIVSWCSQIEVLRHRAIGCFL 350
Query: 346 THCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKC 405
THCGW+S LE L LGV VVA P +SDQP NAK +EE+W+ GVR ++N G+V E+ +C
Sbjct: 351 THCGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEGLVERGEIMRC 410
Query: 406 VNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRL 450
+ VM+ +S +++ N KW+ A +A GGSSDKN++ FV L
Sbjct: 411 LEAVMEA-KSVELRENAEKWKRLATEAGREGGSSDKNVEAFVKSL 454
|
|
| TAIR|locus:2130205 UGT84A1 "AT4G15480" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 723 (259.6 bits), Expect = 1.8e-71, P = 1.8e-71
Identities = 164/469 (34%), Positives = 272/469 (57%)
Query: 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIH-ATTV--G-VEPISDG 63
+HV+++++ QGH+NPLL+ K +ASK + T TT K + A + G ++P+ G
Sbjct: 18 IHVMLVSFQGQGHVNPLLRLGKLIASKGLLVTFVTTELWGKKMRQANKIVDGELKPVGSG 77
Query: 64 ------FDEGGFK---QAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLT 114
FDE + + Y+ ++VG R +++++ +Y+++ PV+C++ + +
Sbjct: 78 SIRFEFFDEEWAEDDDRRADFSLYIAHLESVGIREVSKLVRRYEEANEPVSCLINNPFIP 137
Query: 115 WALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQET-VPLTLPGLPSLASSDL 173
W VA +F I A + S + S Y+ G ++ P E + + LP +P L + ++
Sbjct: 138 WVCHVAEEFNIPCAVLWVQSCACFSAYYHYQDGSVSFPTETEPELDVKLPCVPVLKNDEI 197
Query: 174 PSFLAQPASN-PAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLV 232
PSFL P+S + AIL QF +L+K+ VL +SF+ LE+E++ M L P+ +GPL
Sbjct: 198 PSFL-HPSSRFTGFRQAILGQFKNLSKSFCVLIDSFDSLEQEVIDYMSSLCPVKTVGPLF 256
Query: 233 PSAY-LDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIA 291
A + ++GD I + T D+C+ WL ++P+ SV+Y+SFG++A + Q++EIA
Sbjct: 257 KVARTVTSDVSGD------ICKST-DKCLEWLDSRPKSSVVYISFGTVAYLKQEQIEEIA 309
Query: 292 RGLKASEKPFLWVV-------KENENKLPVEFVNSVGE-TGLVVRWCNQFEVLAHQAVGC 343
G+ S FLWV+ K + LP E S + G++V WC Q +VL+H +V C
Sbjct: 310 HGVLKSGLSFLWVIRPPPHDLKVETHVLPQELKESSAKGKGMIVDWCPQEQVLSHPSVAC 369
Query: 344 FITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAG--IVTGEE 401
F+THCGWNS +E LS GV VV PQ+ DQ T+A ++ +V++ GVR + +V EE
Sbjct: 370 FVTHCGWNSTMESLSSGVPVVCCPQWGDQVTDAVYLIDVFKTGVRLGRGATEERVVPREE 429
Query: 402 LNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRL 450
+ + + E GE+++++++N KW+ A+ AV+ GGSSDKN EFV +L
Sbjct: 430 VAEKLLEATVGEKAEELRKNALKWKAEAEAAVAPGGSSDKNFREFVEKL 478
|
|
| TAIR|locus:2129381 AT4G14090 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 722 (259.2 bits), Expect = 2.3e-71, P = 2.3e-71
Identities = 168/463 (36%), Positives = 251/463 (54%)
Query: 1 MENQRERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT---HYTVKSIHATT-VG 56
+ R H L++T+PAQGHINP LQ A RL T +T H + +T +
Sbjct: 5 VNGSHRRPHYLLVTFPAQGHINPALQLANRLIHHGATVTYSTAVSAHRRMGEPPSTKGLS 64
Query: 57 VEPISDGFDEGGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSES---PVNCIVYDSLL 113
+DGFD+G K K Y+ K GS L ++I D+ + P+ ++Y L+
Sbjct: 65 FAWFTDGFDDG-LKSFEDQKIYMSELKRCGSNALRDIIKANLDATTETEPITGVIYSVLV 123
Query: 114 TWALDVARQFGIYGAAMMTNSASVCSMYWQ-INHGLLTLPVNQETVPLTLPGLPSLASSD 172
W VAR+F + + A+V +Y+ N L + P+ LP LP + + D
Sbjct: 124 PWVSTVAREFHLPTTLLWIEPATVLDIYYYYFNTSYKHL---FDVEPIKLPKLPLITTGD 180
Query: 173 LPSFLAQPASNPAYLAAILEQFGSLN--KNDWVLCNSFEELEKELLRAMLGLWPLVMIGP 230
LPSFL + P+ L + E +L N +L N+F LE + L ++ L ++ IGP
Sbjct: 181 LPSFLQPSKALPSALVTLREHIEALETESNPKILVNTFSALEHDALTSVEKL-KMIPIGP 239
Query: 231 LVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMAD-IAANQVDE 289
LV S+ G + ++++ + + +WL +K E+SVIY+S G+ AD + ++
Sbjct: 240 LVSSS------EGKT----DLFKSSDEDYTKWLDSKLERSVIYISLGTHADDLPEKHMEA 289
Query: 290 IARGLKASEKPFLWVVKEN--ENKLPVEFVNSV--GETGLVVRWCNQFEVLAHQAVGCFI 345
+ G+ A+ +PFLW+V+E E K F+ + + GLVV WC+Q VLAH AVGCF+
Sbjct: 290 LTHGVLATNRPFLWIVREKNPEEKKKNRFLELIRGSDRGLVVGWCSQTAVLAHCAVGCFV 349
Query: 346 THCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKC 405
THCGWNS LE L GV VVA PQF+DQ T AK VE+ W +GV+ K G V GEE+ +C
Sbjct: 350 THCGWNSTLESLESGVPVVAFPQFADQCTTAKLVEDTWRIGVKVKVGEEGDVDGEEIRRC 409
Query: 406 VNEVMDG-ERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFV 447
+ +VM G E +++++ N KW+ A A + GG SD N+ FV
Sbjct: 410 LEKVMSGGEEAEEMRENAEKWKAMAVDAAAEGGPSDLNLKGFV 452
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| O48676 | U74B1_ARATH | 2, ., 4, ., 1, ., 1, 9, 5 | 0.4813 | 0.9564 | 0.9543 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.4.1 | 0.921 |
| 4th Layer | 2.4.1.121 | LOW CONFIDENCE prediction! |
| 4th Layer | 2.4.1.195 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | grail3.0005006601 | hypothetical protein (454 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 459 | |||
| PLN02173 | 449 | PLN02173, PLN02173, UDP-glucosyl transferase famil | 1e-151 | |
| PLN02555 | 480 | PLN02555, PLN02555, limonoid glucosyltransferase | 1e-115 | |
| PLN02152 | 455 | PLN02152, PLN02152, indole-3-acetate beta-glucosyl | 1e-104 | |
| PLN02448 | 459 | PLN02448, PLN02448, UDP-glycosyltransferase family | 2e-81 | |
| PLN02210 | 456 | PLN02210, PLN02210, UDP-glucosyl transferase | 3e-79 | |
| PLN03007 | 482 | PLN03007, PLN03007, UDP-glucosyltransferase family | 2e-54 | |
| PLN02863 | 477 | PLN02863, PLN02863, UDP-glucoronosyl/UDP-glucosyl | 2e-51 | |
| PLN02562 | 448 | PLN02562, PLN02562, UDP-glycosyltransferase | 2e-49 | |
| PLN02410 | 451 | PLN02410, PLN02410, UDP-glucoronosyl/UDP-glucosyl | 4e-49 | |
| PLN02534 | 491 | PLN02534, PLN02534, UDP-glycosyltransferase | 3e-48 | |
| PLN00164 | 480 | PLN00164, PLN00164, glucosyltransferase; Provision | 4e-45 | |
| PLN02167 | 475 | PLN02167, PLN02167, UDP-glycosyltransferase family | 2e-43 | |
| PLN03004 | 451 | PLN03004, PLN03004, UDP-glycosyltransferase | 2e-39 | |
| PLN02554 | 481 | PLN02554, PLN02554, UDP-glycosyltransferase family | 3e-39 | |
| PLN02207 | 468 | PLN02207, PLN02207, UDP-glycosyltransferase | 5e-39 | |
| PLN02992 | 481 | PLN02992, PLN02992, coniferyl-alcohol glucosyltran | 2e-37 | |
| PLN02670 | 472 | PLN02670, PLN02670, transferase, transferring glyc | 2e-29 | |
| PLN03015 | 470 | PLN03015, PLN03015, UDP-glucosyl transferase | 3e-29 | |
| cd03784 | 401 | cd03784, GT1_Gtf_like, This family includes the Gt | 5e-29 | |
| PLN02764 | 453 | PLN02764, PLN02764, glycosyltransferase family pro | 2e-26 | |
| pfam00201 | 500 | pfam00201, UDPGT, UDP-glucoronosyl and UDP-glucosy | 7e-22 | |
| PLN00414 | 446 | PLN00414, PLN00414, glycosyltransferase family pro | 3e-21 | |
| PLN02208 | 442 | PLN02208, PLN02208, glycosyltransferase family pro | 1e-18 | |
| COG1819 | 406 | COG1819, COG1819, Glycosyl transferases, related t | 2e-17 | |
| TIGR01426 | 392 | TIGR01426, MGT, glycosyltransferase, MGT family | 1e-14 | |
| PHA03392 | 507 | PHA03392, egt, ecdysteroid UDP-glucosyltransferase | 9e-10 |
| >gnl|CDD|177830 PLN02173, PLN02173, UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Score = 437 bits (1126), Expect = e-151
Identities = 201/456 (44%), Positives = 306/456 (67%), Gaps = 20/456 (4%)
Query: 4 QRERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIH---ATTVGVEPI 60
++ R HVL + +P+QGHI P+ QF KRL SK K T T + +IH ++ + + I
Sbjct: 2 EKMRGHVLAVPFPSQGHITPIRQFCKRLHSKGFKTTHTLTTFIFNTIHLDPSSPISIATI 61
Query: 61 SDGFDEGGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVA 120
SDG+D+GGF A SV YL++FKT GS+T+A++I K++ +++P+ CIVYDS + WALD+A
Sbjct: 62 SDGYDQGGFSSAGSVPEYLQNFKTFGSKTVADIIRKHQSTDNPITCIVYDSFMPWALDLA 121
Query: 121 RQFGIYGAAMMTNSASVCSMYW--QINHGLLTLPVNQETVPLTLPGLPSLASSDLPSFLA 178
R+FG+ A T S +V + + IN+G LTLP+ LP L DLP+F+
Sbjct: 122 REFGLAAAPFFTQSCAVNYINYLSYINNGSLTLPIKD---------LPLLELQDLPTFVT 172
Query: 179 QPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAYLD 238
S+ AY +L+QF + +K D+VL NSF +L+ + + P++ IGP VPS YLD
Sbjct: 173 PTGSHLAYFEMVLQQFTNFDKADFVLVNSFHDLDLHENELLSKVCPVLTIGPTVPSMYLD 232
Query: 239 QQIAGDSAYGANIWEPTGDQ-CMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKAS 297
QQI D+ Y N+++ C WL +P+ SV+Y++FGSMA +++ Q++EIA + S
Sbjct: 233 QQIKSDNDYDLNLFDLKEAALCTDWLDKRPQGSVVYIAFGSMAKLSSEQMEEIASAI--S 290
Query: 298 EKPFLWVVKENE-NKLPVEFVNSVG-ETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILE 355
+LWVV+ +E +KLP F+ +V + LV++W Q +VL+++A+GCF+THCGWNS +E
Sbjct: 291 NFSYLWVVRASEESKLPPGFLETVDKDKSLVLKWSPQLQVLSNKAIGCFMTHCGWNSTME 350
Query: 356 GLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNR-AGIVTGEELNKCVNEVMDGER 414
GLSLGV +VA+PQ++DQP NAK++++VW+VGVR K + +GI EE+ + EVM+GE+
Sbjct: 351 GLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAEKESGIAKREEIEFSIKEVMEGEK 410
Query: 415 SQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRL 450
S+++K N KWR+ A K++S GGS+D NI+ FV ++
Sbjct: 411 SKEMKENAGKWRDLAVKSLSEGGSTDININTFVSKI 446
|
Length = 449 |
| >gnl|CDD|178170 PLN02555, PLN02555, limonoid glucosyltransferase | Back alignment and domain information |
|---|
Score = 346 bits (889), Expect = e-115
Identities = 174/474 (36%), Positives = 267/474 (56%), Gaps = 31/474 (6%)
Query: 1 MENQRERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIH--------- 51
ME++ VHV+++++P QGH+NPLL+ K LASK + T TT K +
Sbjct: 1 MESESSLVHVMLVSFPGQGHVNPLLRLGKLLASKGLLVTFVTTESWGKKMRQANKIQDGV 60
Query: 52 ATTVG-----VEPISDGFDEGGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNC 106
VG E DG+ E ++ + YL + VG R + ++ +Y + PV+C
Sbjct: 61 LKPVGDGFIRFEFFEDGWAEDDPRRQ-DLDLYLPQLELVGKREIPNLVKRYAEQGRPVSC 119
Query: 107 IVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQE-TVPLTLPGL 165
++ + + W DVA + GI A + S + S Y+ HGL+ P E + + LP +
Sbjct: 120 LINNPFIPWVCDVAEELGIPSAVLWVQSCACFSAYYHYYHGLVPFPTETEPEIDVQLPCM 179
Query: 166 PSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPL 225
P L ++PSFL + P AIL Q+ +L+K +L ++F+ELEKE++ M L P+
Sbjct: 180 PLLKYDEIPSFLHPSSPYPFLRRAILGQYKNLDKPFCILIDTFQELEKEIIDYMSKLCPI 239
Query: 226 VMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAAN 285
+GPL A +S +I +P D C+ WL +KP SV+Y+SFG++ +
Sbjct: 240 KPVGPLFKMAK-----TPNSDVKGDISKPA-DDCIEWLDSKPPSSVVYISFGTVVYLKQE 293
Query: 286 QVDEIARGLKASEKPFLWVVKENENK-------LPVEFVNSVGETGLVVRWCNQFEVLAH 338
Q+DEIA G+ S FLWV++ LP EF+ G+ G +V+WC Q +VLAH
Sbjct: 294 QIDEIAYGVLNSGVSFLWVMRPPHKDSGVEPHVLPEEFLEKAGDKGKIVQWCPQEKVLAH 353
Query: 339 QAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRA--GI 396
+V CF+THCGWNS +E LS GV VV PQ+ DQ T+A ++ +V++ GVR + A +
Sbjct: 354 PSVACFVTHCGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRGEAENKL 413
Query: 397 VTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRL 450
+T EE+ +C+ E GE++ ++K+N KW+E A+ AV+ GGSSD+N EFV +L
Sbjct: 414 ITREEVAECLLEATVGEKAAELKQNALKWKEEAEAAVAEGGSSDRNFQEFVDKL 467
|
Length = 480 |
| >gnl|CDD|177813 PLN02152, PLN02152, indole-3-acetate beta-glucosyltransferase | Back alignment and domain information |
|---|
Score = 316 bits (812), Expect = e-104
Identities = 177/465 (38%), Positives = 261/465 (56%), Gaps = 44/465 (9%)
Query: 9 HVLVLTYPAQGHINPLLQFAKRLASKR-VKATLATTHYTVKSIHATTV----GVEPIS-- 61
H L++T+PAQGH+NP L+FA+RL + T AT + IH + + VE +S
Sbjct: 5 HFLLVTFPAQGHVNPSLRFARRLIKTTGTRVTFATC---LSVIHRSMIPNHNNVENLSFL 61
Query: 62 ---DGFDEGGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALD 118
DGFD+G V+ L +F+ G + L++ I + +SPV C++Y L WA
Sbjct: 62 TFSDGFDDGVISNTDDVQNRLVNFERNGDKALSDFIEANLNGDSPVTCLIYTILPNWAPK 121
Query: 119 VARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPGLPSLASSDLPSFLA 178
VAR+F + + A V +Y+ N+ V P LPSL DLPSFL+
Sbjct: 122 VARRFHLPSVLLWIQPAFVFDIYY--NYSTGNNSV------FEFPNLPSLEIRDLPSFLS 173
Query: 179 QPASNPAYLAAILEQFGSLNK--NDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAY 236
+N A A E L + N +L N+F+ LE E L A+ + +V +GPL+P+
Sbjct: 174 PSNTNKAAQAVYQELMEFLKEESNPKILVNTFDSLEPEFLTAIPNI-EMVAVGPLLPA-- 230
Query: 237 LDQQIAGDSAYGANI-WEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLK 295
+I S G ++ WL +K E SVIYVSFG+M +++ Q++E+AR L
Sbjct: 231 ---EIFTGSESGKDLSVRDQSSSYTLWLDSKTESSVIYVSFGTMVELSKKQIEELARALI 287
Query: 296 ASEKPFLWVVK---------ENENKLPVE----FVNSVGETGLVVRWCNQFEVLAHQAVG 342
++PFLWV+ E E + +E F + + E G++V WC+Q EVL H+AVG
Sbjct: 288 EGKRPFLWVITDKLNREAKIEGEEETEIEKIAGFRHELEEVGMIVSWCSQIEVLRHRAVG 347
Query: 343 CFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEEL 402
CF+THCGW+S LE L LGV VVA P +SDQP NAK +EE+W+ GVR ++N G+V E+
Sbjct: 348 CFVTHCGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEGLVERGEI 407
Query: 403 NKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFV 447
+C+ VM+ E+S +++ + KW+ A +A GGSSDKN++ FV
Sbjct: 408 RRCLEAVME-EKSVELRESAEKWKRLAIEAGGEGGSSDKNVEAFV 451
|
Length = 455 |
| >gnl|CDD|215247 PLN02448, PLN02448, UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 258 bits (662), Expect = 2e-81
Identities = 155/468 (33%), Positives = 232/468 (49%), Gaps = 56/468 (11%)
Query: 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKAT-----------LATTHYTVKSIH-ATTVG 56
HV+ + YP +GHINP++ K LAS++ L + +I AT
Sbjct: 12 HVVAMPYPGRGHINPMMNLCKLLASRKPDILITFVVTEEWLGLIGSDPKPDNIRFATIPN 71
Query: 57 VEPISD---GFDEGGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDS-ESPVNCIVYDSL 112
V P S+ D GF +A K + + D E PV IV D+
Sbjct: 72 VIP-SELVRAADFPGFLEAVMTK-------------MEAPFEQLLDRLEPPVTAIVADTY 117
Query: 113 LTWALDVARQFGIYGAAMMTNSASVCSMYW------QINHGLLTLPVNQETVPLTLPGLP 166
L WA+ V + I A++ T SA+ S+++ Q H + L + E +PGL
Sbjct: 118 LFWAVGVGNRRNIPVASLWTMSATFFSVFYHFDLLPQNGHFPVELSESGEERVDYIPGLS 177
Query: 167 SLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKEL---LRAMLGLW 223
S SDLP + L ILE F + K ++L SF ELE + L++
Sbjct: 178 STRLSDLPPIFHGNSRRV--LKRILEAFSWVPKAQYLLFTSFYELEAQAIDALKSKFPF- 234
Query: 224 PLVMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIA 283
P+ IGP +P Y+ ++ +S+ N E +WL ++PE SV+YVS GS ++
Sbjct: 235 PVYPIGPSIP--YM--ELKDNSSSSNN--EDNEPDYFQWLDSQPEGSVLYVSLGSFLSVS 288
Query: 284 ANQVDEIARGLKASEKPFLWVVKENENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGC 343
+ Q+DEIA GL+ S FLWV + ++L G+ GLVV WC+Q +VL H +VG
Sbjct: 289 SAQMDEIAAGLRDSGVRFLWVARGEASRLKE----ICGDMGLVVPWCDQLKVLCHSSVGG 344
Query: 344 FITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRA--GIVTGEE 401
F THCGWNS LE + GV ++ P F DQP N+K + E W++G R K+ +V EE
Sbjct: 345 FWTHCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEETLVGREE 404
Query: 402 LNKCVNEVMDGERSQ--KIKRNVSKWREFAKKAVSAGGSSDKNIDEFV 447
+ + V MD E + +++R + +E + A++ GGSSD N+D F+
Sbjct: 405 IAELVKRFMDLESEEGKEMRRRAKELQEICRGAIAKGGSSDTNLDAFI 452
|
Length = 459 |
| >gnl|CDD|215127 PLN02210, PLN02210, UDP-glucosyl transferase | Back alignment and domain information |
|---|
Score = 253 bits (646), Expect = 3e-79
Identities = 156/459 (33%), Positives = 248/459 (54%), Gaps = 26/459 (5%)
Query: 3 NQRERVHVLVLTYPAQGHINPLLQFAK--RLASKRVKATLATTHYTVKSIHATTVGVEPI 60
++ + HVL++T QGHINP+L+ AK L+SK + TLATT + P+
Sbjct: 4 SEGQETHVLMVTLAFQGHINPMLKLAKHLSLSSKNLHFTLATTEQARDLLSTVEKPRRPV 63
Query: 61 SDGFDEGGF-KQAP-SVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALD 118
F G K P + + L+S VG++ L+++I E +CI+ W
Sbjct: 64 DLVFFSDGLPKDDPRAPETLLKSLNKVGAKNLSKII-----EEKRYSCIISSPFTPWVPA 118
Query: 119 VARQFGIYGAAMMTNSASVCSMYWQINHGLLTLP----VNQETVPLTLPGLPSLASSDLP 174
VA I A + + S+Y++ + P +NQ + LP LP L DLP
Sbjct: 119 VAAAHNIPCAILWIQACGAYSVYYRYYMKTNSFPDLEDLNQT---VELPALPLLEVRDLP 175
Query: 175 SFLAQPASNPAYLAAILEQFGS-LNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVP 233
SF+ S A+ ++ +F L WVL NSF ELE E++ +M L P++ IGPLV
Sbjct: 176 SFML--PSGGAHFNNLMAEFADCLRYVKWVLVNSFYELESEIIESMADLKPVIPIGPLV- 232
Query: 234 SAYLDQQIAGDSAYGANI--WEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIA 291
S +L ++ G N+ + + D CM WL + SV+Y+SFGSM + NQV+ IA
Sbjct: 233 SPFLLGDDEEETLDGKNLDMCK-SDDCCMEWLDKQARSSVVYISFGSMLESLENQVETIA 291
Query: 292 RGLKASEKPFLWVVKENENKLPVEFVNSVGE--TGLVVRWCNQFEVLAHQAVGCFITHCG 349
+ LK PFLWV++ E V+ + + + G+V+ W Q ++L+H A+ CF+THCG
Sbjct: 292 KALKNRGVPFLWVIRPKEKAQNVQVLQEMVKEGQGVVLEWSPQEKILSHMAISCFVTHCG 351
Query: 350 WNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRA-GIVTGEELNKCVNE 408
WNS +E + GV VVA P ++DQP +A+ + +V+ +GVR + + G + EE+ +C+
Sbjct: 352 WNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGELKVEEVERCIEA 411
Query: 409 VMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFV 447
V +G + I+R ++ + A+ A++ GGSS +N+D F+
Sbjct: 412 VTEGPAAADIRRRAAELKHVARLALAPGGSSARNLDLFI 450
|
Length = 456 |
| >gnl|CDD|178584 PLN03007, PLN03007, UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Score = 188 bits (480), Expect = 2e-54
Identities = 148/496 (29%), Positives = 236/496 (47%), Gaps = 70/496 (14%)
Query: 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT-------HYTVKSIHATTVGV 57
E++H+L + A GH+ P L AK +S+ K+T+ TT +++ G+
Sbjct: 3 HEKLHILFFPFMAHGHMIPTLDMAKLFSSRGAKSTILTTPLNAKIFEKPIEAFKNLNPGL 62
Query: 58 E--------PISD-GFDEGG------FKQAPSVKAYLESFKTVGSRTLAEVILKYKDSES 102
E P + G EG L ++ + + K ++
Sbjct: 63 EIDIQIFNFPCVELGLPEGCENVDFITSNNNDDSGDLFLKFLFSTKYFKDQLEKLLETTR 122
Query: 103 PVNCIVYDSLLTWALDVARQFGI-----YGAAMMTNSASVCSMYWQINHGLLTLP--VNQ 155
P +C+V D WA + A +FG+ +G T S+C+ Y + V
Sbjct: 123 P-DCLVADMFFPWATEAAEKFGVPRLVFHG----TGYFSLCASY---CIRVHKPQKKVAS 174
Query: 156 ETVPLTLPGLPS--LASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEK 213
+ P +P LP + + + + + + ++ + E S K+ VL NSF ELE
Sbjct: 175 SSEPFVIPDLPGDIVITEEQINDADEESPMGKFMKEVRE---SEVKSFGVLVNSFYELES 231
Query: 214 ---ELLRAMLG--LWPLVMIGPLVPSAYLDQQIAGDSAYG--ANIWEPTGDQCMRWLATK 266
+ ++ + W IGPL S Y ++ + G ANI E +C++WL +K
Sbjct: 232 AYADFYKSFVAKRAW---HIGPL--SLY-NRGFEEKAERGKKANIDE---QECLKWLDSK 282
Query: 267 PEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENENK------LPVEFVNSV 320
SVIY+SFGS+A Q+ EIA GL+ S + F+WVV++NEN+ LP F
Sbjct: 283 KPDSVIYLSFGSVASFKNEQLFEIAAGLEGSGQNFIWVVRKNENQGEKEEWLPEGFEERT 342
Query: 321 GETGLVVR-WCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFV 379
GL++R W Q +L HQA G F+THCGWNS+LEG++ G+ +V P ++Q N K V
Sbjct: 343 KGKGLIIRGWAPQVLILDHQATGGFVTHCGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLV 402
Query: 380 EEVWEVGVR--AKKN---RAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVS 434
+V GV AKK + ++ E++ K V EV+ GE +++ + K E AK AV
Sbjct: 403 TQVLRTGVSVGAKKLVKVKGDFISREKVEKAVREVIVGEEAEERRLRAKKLAEMAKAAVE 462
Query: 435 AGGSSDKNIDEFVVRL 450
GGSS ++++F+ L
Sbjct: 463 EGGSSFNDLNKFMEEL 478
|
Length = 482 |
| >gnl|CDD|215465 PLN02863, PLN02863, UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Score = 180 bits (458), Expect = 2e-51
Identities = 137/472 (29%), Positives = 217/472 (45%), Gaps = 49/472 (10%)
Query: 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIH---ATTVGVEPISDGFD 65
HVLV +PAQGH+ PLL RLA + + T+ T + ++ + +E +
Sbjct: 11 HVLVFPFPAQGHMIPLLDLTHRLALRGLTITVLVTPKNLPFLNPLLSKHPSIETLV---- 66
Query: 66 EGGFKQAPSVKAYLESFKTVGS-------RTLAE----VILKYKDSESPVNCIVYDSLLT 114
F PS+ + +E+ K + L E ++ ++ SP I+ D L
Sbjct: 67 -LPFPSHPSIPSGVENVKDLPPSGFPLMIHALGELYAPLLSWFRSHPSPPVAIISDMFLG 125
Query: 115 WALDVARQFGIYGAAMMTNSA-SVCSMY--WQINHGLLTLPVNQ-ETVPLT-LPGLPSLA 169
W ++A Q GI + A ++ MY W+ P +Q E + + +P P
Sbjct: 126 WTQNLACQLGIRRFVFSPSGAMALSIMYSLWR-EMPTKINPDDQNEILSFSKIPNCPKYP 184
Query: 170 SSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLC-NSFEELEK---ELLRAMLGLWPL 225
+ S I + F + N W L NSF ELE E L+ LG +
Sbjct: 185 WWQISSLYRSYVEGDPAWEFIKDSFRA-NIASWGLVVNSFTELEGIYLEHLKKELGHDRV 243
Query: 226 VMIGPLVPSAYLDQQIAGDSAYGANIWEPTG---DQCMRWLATKPEKSVIYVSFGSMADI 282
+GP++P ++G+ + P+ D M WL T + V+YV FGS +
Sbjct: 244 WAVGPILP-------LSGEKSGLMERGGPSSVSVDDVMTWLDTCEDHKVVYVCFGSQVVL 296
Query: 283 AANQVDEIARGLKASEKPFLWVVKENENK------LPVEFVNSVGETGLVVR-WCNQFEV 335
Q++ +A GL+ S F+W VKE N+ +P F + V GLV+R W Q +
Sbjct: 297 TKEQMEALASGLEKSGVHFIWCVKEPVNEESDYSNIPSGFEDRVAGRGLVIRGWAPQVAI 356
Query: 336 LAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAG 395
L+H+AVG F+THCGWNS+LEGL GV ++A P +DQ NA + + +V VR +
Sbjct: 357 LSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGADT 416
Query: 396 IVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFV 447
+ +EL + E + + ++ + + R A A+ GSS K++D FV
Sbjct: 417 VPDSDELARVFMESVSENQVERER--AKELRRAALDAIKERGSSVKDLDGFV 466
|
Length = 477 |
| >gnl|CDD|215305 PLN02562, PLN02562, UDP-glycosyltransferase | Back alignment and domain information |
|---|
Score = 174 bits (443), Expect = 2e-49
Identities = 122/406 (30%), Positives = 195/406 (48%), Gaps = 39/406 (9%)
Query: 6 ERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATT-----VGVEPI 60
+R ++++ YPAQGH+ P+L+ A S+ + + T + + I AT + I
Sbjct: 5 QRPKIILVPYPAQGHVTPMLKLASAFLSRGFEPVVITPEFIHRRISATLDPKLGITFMSI 64
Query: 61 SDGFDEGGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVA 120
SDG D+ + S++ +E+ E +L D + V C+V D L +WA+ VA
Sbjct: 65 SDGQDDDPPRDFFSIENSMENTMPP----QLERLLHKLDEDGEVACMVVDLLASWAIGVA 120
Query: 121 RQFGIYGA----AMMTNSASVCSMYWQINHGLLT---LPVNQETVPLTLPGLPSLASSDL 173
+ G+ A M+ + ++ + GL++ P E LP P L++ DL
Sbjct: 121 DRCGVPVAGFWPVMLAAYRLIQAIPELVRTGLISETGCPRQLEK-ICVLPEQPLLSTEDL 179
Query: 174 PSFLAQPASNPA---YLAAILEQFGSLNKNDWVLCNSF-EELEKELLRAMLGLWP----- 224
P + P + A + LE+ SL W+L NSF +E ++
Sbjct: 180 PWLIGTPKARKARFKFWTRTLERTKSLR---WILMNSFKDEEYDDVKNHQASYNNGQNPQ 236
Query: 225 LVMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGS-MADIA 283
++ IGPL I S + ++ C+ WL + SVIY+SFGS ++ I
Sbjct: 237 ILQIGPLHNQEAT--TITKPSFWEEDM------SCLGWLQEQKPNSVIYISFGSWVSPIG 288
Query: 284 ANQVDEIARGLKASEKPFLWVVKEN-ENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVG 342
+ V +A L+AS +PF+WV+ LP +V V + G VV W Q EVL HQAVG
Sbjct: 289 ESNVRTLALALEASGRPFIWVLNPVWREGLPPGYVERVSKQGKVVSWAPQLEVLKHQAVG 348
Query: 343 CFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVR 388
C++THCGWNS +E + ++ P DQ N ++ +VW++GVR
Sbjct: 349 CYLTHCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVR 394
|
Length = 448 |
| >gnl|CDD|178032 PLN02410, PLN02410, UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Score = 173 bits (440), Expect = 4e-49
Identities = 136/483 (28%), Positives = 231/483 (47%), Gaps = 74/483 (15%)
Query: 1 MENQRERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT--HYTVKSIHATTVGVE 58
ME + R V+++ PAQGHI+P++Q AK L K T+A T +Y S T
Sbjct: 1 MEEKPARRRVVLVPVPAQGHISPMMQLAKTLHLKGFSITIAQTKFNYFSPSDDFTDFQFV 60
Query: 59 PISDGFDEGGFKQAPSVKAYLE-------SFKTVGSRTLAEVILKYKDSESPVNCIVYDS 111
I + E FK ++ + SFK L +++L+ + + C+VYD
Sbjct: 61 TIPESLPESDFKNLGPIEFLHKLNKECQVSFKDC----LGQLVLQQGNE---IACVVYDE 113
Query: 112 LLTWALDVARQFGIYGAAMMTNSAS--VC-SMYWQINHGLLTLPVNQ------ETVPLTL 162
+ +A A++F + T SA+ VC S++ ++ + P+ + E VP
Sbjct: 114 FMYFAEAAAKEFKLPNVIFSTTSATAFVCRSVFDKLYANNVLAPLKEPKGQQNELVPEFH 173
Query: 163 PGLPSLASSDLPSFLAQPASNPAYLAAILEQFGS-----------LNKNDWVLCNSFEEL 211
P L D P S+ A L +I+E + + +N + +S L
Sbjct: 174 P----LRCKDFP------VSHWASLESIMELYRNTVDKRTASSVIINTASCLESSSLSRL 223
Query: 212 EKELLRAMLGLWPLVMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSV 271
+++L + + PL ++ P++ L++ C+ WL + + SV
Sbjct: 224 QQQLQIPVYPIGPLHLVAS-APTSLLEEN----------------KSCIEWLNKQKKNSV 266
Query: 272 IYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENE-------NKLPVEFVNSVGETG 324
I+VS GS+A + N+V E A GL +S + FLWV++ LP EF + G
Sbjct: 267 IFVSLGSLALMEINEVMETASGLDSSNQQFLWVIRPGSVRGSEWIESLPKEFSKIISGRG 326
Query: 325 LVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWE 384
+V+W Q EVL+H AVG F +HCGWNS LE + GV ++ P SDQ NA+++E VW+
Sbjct: 327 YIVKWAPQKEVLSHPAVGGFWSHCGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWK 386
Query: 385 VGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNID 444
+G++ + G + + + V +M E +++++ +E + +V +GGSS +++
Sbjct: 387 IGIQVE----GDLDRGAVERAVKRLMVEEEGEEMRKRAISLKEQLRASVISGGSSHNSLE 442
Query: 445 EFV 447
EFV
Sbjct: 443 EFV 445
|
Length = 451 |
| >gnl|CDD|215293 PLN02534, PLN02534, UDP-glycosyltransferase | Back alignment and domain information |
|---|
Score = 171 bits (436), Expect = 3e-48
Identities = 141/503 (28%), Positives = 231/503 (45%), Gaps = 81/503 (16%)
Query: 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATT---------VGV 57
++H +++ AQGH+ P++ A+ LA + V +L TT T + +
Sbjct: 8 QLHFVLIPLMAQGHMIPMIDMARLLAERGVIVSLVTTPQNASRFAKTIDRARESGLPIRL 67
Query: 58 EPISDGFDEGGFKQAPSVKAYLESFKTVGSRTL--------------AEVILKYKDSESP 103
I E G E+ T+ SR L E L+ P
Sbjct: 68 VQIPFPCKEVGLPIG------CENLDTLPSRDLLRKFYDAVDKLQQPLERFLEQAKP--P 119
Query: 104 VNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLT--LPVNQETVPLT 161
+CI+ D L+W A++F I ++ + S+ N L L V+ ++ P
Sbjct: 120 PSCIISDKCLSWTSKTAQRFNI--PRIVFHGMCCFSLLSSHNIRLHNAHLSVSSDSEPFV 177
Query: 162 LPGLP---SLASSDLP-SFLAQPASNPAYLAAILEQFGSLNKNDW-VLCNSFEELE---- 212
+PG+P + + LP +F++ P L + + + V+ NSF ELE
Sbjct: 178 VPGMPQSIEITRAQLPGAFVSLPD-----LDDVRNKMREAESTAFGVVVNSFNELEHGCA 232
Query: 213 KELLRAM-LGLWPLVMIGP--LVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEK 269
+ +A+ +W +GP L LD+ G+ A +I E QC+ WL + +
Sbjct: 233 EAYEKAIKKKVW---CVGPVSLCNKRNLDKFERGNKA---SIDE---TQCLEWLDSMKPR 283
Query: 270 SVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENENKLPVE-------FVNSVGE 322
SVIY GS+ + +Q+ E+ GL+AS+KPF+WV+K E +E F +
Sbjct: 284 SVIYACLGSLCRLVPSQLIELGLGLEASKKPFIWVIKTGEKHSELEEWLVKENFEERIKG 343
Query: 323 TGLVVR-WCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEE 381
GL+++ W Q +L+H A+G F+THCGWNS +EG+ GV ++ P F++Q N K + E
Sbjct: 344 RGLLIKGWAPQVLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVE 403
Query: 382 VWEVGVR---------AKKNRAGI-VTGEELNKCVNEVMD--GERSQKIKRNVSKWREFA 429
V +GVR + R G+ V +E+ K V +MD GE ++ +R + A
Sbjct: 404 VLRIGVRVGVEVPVRWGDEERVGVLVKKDEVEKAVKTLMDDGGEEGERRRRRAQELGVMA 463
Query: 430 KKAVSAGGSSDKNIDEFVVRLLK 452
+KA+ GGSS N+ + +LK
Sbjct: 464 RKAMELGGSSHINLSILIQDVLK 486
|
Length = 491 |
| >gnl|CDD|215084 PLN00164, PLN00164, glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 163 bits (414), Expect = 4e-45
Identities = 116/378 (30%), Positives = 173/378 (45%), Gaps = 62/378 (16%)
Query: 101 ESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVP- 159
PV +V D T LDVAR+ + T++A++ ++ +L LP E V
Sbjct: 108 SCPVAALVVDFFCTPLLDVARELAVPAYVYFTSTAAMLAL-------MLRLPALDEEVAV 160
Query: 160 --------LTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGS-LNKNDWVLCNSFEE 210
+ +PGLP + +S LP+ + S P Y A G + ++ N+ E
Sbjct: 161 EFEEMEGAVDVPGLPPVPASSLPAPVMDKKS-PNY--AWFVYHGRRFMEAAGIIVNTAAE 217
Query: 211 LEKELLRAMLG--------LWPLVMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRW 262
LE +L A+ + IGP++ A+ E +C+RW
Sbjct: 218 LEPGVLAAIADGRCTPGRPAPTVYPIGPVISLAF------------TPPAEQPPHECVRW 265
Query: 263 LATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVK-------------ENE 309
L +P SV+++ FGSM A QV EIA GL+ S FLWV++ + +
Sbjct: 266 LDAQPPASVVFLCFGSMGFFDAPQVREIAAGLERSGHRFLWVLRGPPAAGSRHPTDADLD 325
Query: 310 NKLPVEFVNSVGETGLV-VRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQ 368
LP F+ GLV W Q E+LAH AVG F+THCGWNS+LE L GV + P
Sbjct: 326 ELLPEGFLERTKGRGLVWPTWAPQKEILAHAAVGGFVTHCGWNSVLESLWHGVPMAPWPL 385
Query: 369 FSDQPTNAKFVEEVWEVGV----RAKKNRAGIVTGEELNKCVNEVMDG--ERSQKIKRNV 422
+++Q NA E V ++GV + + R V EL + V +M G E +K +
Sbjct: 386 YAEQHLNA--FELVADMGVAVAMKVDRKRDNFVEAAELERAVRSLMGGGEEEGRKAREKA 443
Query: 423 SKWREFAKKAVSAGGSSD 440
++ + +KAV GGSS
Sbjct: 444 AEMKAACRKAVEEGGSSY 461
|
Length = 480 |
| >gnl|CDD|215112 PLN02167, PLN02167, UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 158 bits (401), Expect = 2e-43
Identities = 138/490 (28%), Positives = 218/490 (44%), Gaps = 66/490 (13%)
Query: 10 VLVLTYPAQGHINPLLQFAKRLASKRVKATLAT-----------THYTVKSIHATTVGVE 58
++ + +P+ GHI ++FAKRL + + T +KS+ A+ +
Sbjct: 6 LIFVPFPSTGHILVTIEFAKRLINLDRRIHTITILYWSLPFAPQADAFLKSLIASEPRIR 65
Query: 59 -----PISDGFDEGGFKQAPSVKAYLESF--KTVG--SRTLAEVILKYKDSES-PVNCIV 108
+ D F +A +AY+ F K V L+ ++ +S+S V +V
Sbjct: 66 LVTLPEVQDPPPMELFVKAS--EAYILEFVKKMVPLVRDALSTLVSSRDESDSVRVAGLV 123
Query: 109 YDSLLTWALDVARQFGIYGAAMMTNSASVCSM--YWQINHGL----LTLPVNQETVPLTL 162
D +DV +F + +T +A M Y H L +E +P+
Sbjct: 124 LDFFCVPLIDVGNEFNLPSYIFLTCNAGFLGMMKYLPERHRKTASEFDLSSGEEELPI-- 181
Query: 163 PG-LPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELE----KELLR 217
PG + S+ + LP L S A++ I E+F +L NSF ELE R
Sbjct: 182 PGFVNSVPTKVLPPGLFMKESYEAWVE-IAERFPEAKG---ILVNSFTELEPNAFDYFSR 237
Query: 218 AMLGLWPLVMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFG 277
P+ +GP++ N+ D+ MRWL +PE SV+++ FG
Sbjct: 238 LPENYPPVYPVGPILSL---------KDRTSPNLDSSDRDRIMRWLDDQPESSVVFLCFG 288
Query: 278 SMADIAANQVDEIARGLKASEKPFLWVVKENENK-------LPVEFVNSVGETGLVVRWC 330
S+ + A Q+ EIA+ L+ FLW ++ N + LP F++ V GLV W
Sbjct: 289 SLGSLPAPQIKEIAQALELVGCRFLWSIRTNPAEYASPYEPLPEGFMDRVMGRGLVCGWA 348
Query: 331 NQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAK 390
Q E+LAH+A+G F++HCGWNS+LE L GV + P +++Q NA V E+G+ +
Sbjct: 349 PQVEILAHKAIGGFVSHCGWNSVLESLWFGVPIATWPMYAEQQLNA--FTMVKELGLAVE 406
Query: 391 ------KNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNID 444
IV +E+ V +MDGE ++ V + E A+KAV GGSS +
Sbjct: 407 LRLDYVSAYGEIVKADEIAGAVRSLMDGE--DVPRKKVKEIAEAARKAVMDGGSSFVAVK 464
Query: 445 EFVVRLLKAD 454
F+ LL
Sbjct: 465 RFIDDLLGDH 474
|
Length = 475 |
| >gnl|CDD|178581 PLN03004, PLN03004, UDP-glycosyltransferase | Back alignment and domain information |
|---|
Score = 147 bits (371), Expect = 2e-39
Identities = 120/443 (27%), Positives = 202/443 (45%), Gaps = 70/443 (15%)
Query: 12 VLTYPAQ--GHINPLLQFAKRLASKR----VKATLATTHYTVKSIHATTVGVEPISDGFD 65
++ YPA GH+ +++ K + SK + L Y +S T + +S F
Sbjct: 6 IVLYPAPPIGHLVSMVELGKTILSKNPSLSIHIILVPPPYQPES---TATYISSVSSSFP 62
Query: 66 EGGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESP--------------VNCIVYDS 111
F P+V Y S + ++L+ +P V ++ D
Sbjct: 63 SITFHHLPAVTPY--SSSSTSRHHHESLLLEILCFSNPSVHRTLFSLSRNFNVRAMIIDF 120
Query: 112 LLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVP---------LTL 162
T LD+ F + S + C + LP ET P + +
Sbjct: 121 FCTAVLDITADF-TFPVYFFYTSGAACLAF------SFYLPTIDETTPGKNLKDIPTVHI 173
Query: 163 PGLPSLASSDLPSFLAQPASNPAYLAAILEQFG-SLNKNDWVLCNSFEELEKELLRAM-- 219
PG+P + SD+P + + + Y I+ FG L+K+ ++ N+F+ LE ++A+
Sbjct: 174 PGVPPMKGSDMPKAVLE-RDDEVYDVFIM--FGKQLSKSSGIIINTFDALENRAIKAITE 230
Query: 220 -LGLWPLVMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGS 278
L + IGPL+ + ++ + + C+ WL ++PEKSV+++ FGS
Sbjct: 231 ELCFRNIYPIGPLIVNGRIEDRNDNKAV-----------SCLNWLDSQPEKSVVFLCFGS 279
Query: 279 MADIAANQVDEIARGLKASEKPFLWVVK---ENENK-------LPVEFVNSVGETGLVVR 328
+ + QV EIA GL+ S + FLWVV+ E E LP F++ + G+VV+
Sbjct: 280 LGLFSKEQVIEIAVGLEKSGQRFLWVVRNPPELEKTELDLKSLLPEGFLSRTEDKGMVVK 339
Query: 329 -WCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGV 387
W Q VL H+AVG F+THCGWNSILE + GV +VA P +++Q N + + ++ +
Sbjct: 340 SWAPQVPVLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAI 399
Query: 388 RAKKNRAGIVTGEELNKCVNEVM 410
++ G V+ E+ K V E++
Sbjct: 400 SMNESETGFVSSTEVEKRVQEII 422
|
Length = 451 |
| >gnl|CDD|215304 PLN02554, PLN02554, UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 147 bits (373), Expect = 3e-39
Identities = 127/485 (26%), Positives = 211/485 (43%), Gaps = 73/485 (15%)
Query: 15 YPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVG----VEPISDGFDE---- 66
P GH+ P ++ AK L + L+ T + S + +S ++
Sbjct: 10 SPGIGHLRPTVELAKLLVDSDDR--LSITVIIIPSRSGDDASSSAYIASLSASSEDRLRY 67
Query: 67 ---GGFKQAPS----VKAYLESFKTVGSRTLAEVILKYKDSESP-VNCIVYDSLLTWALD 118
Q + ++Y+++ K +A+++ SP + V D T +D
Sbjct: 68 EVISAGDQPTTEDPTFQSYIDNQKPKVRDAVAKLVDDSSTPSSPRLAGFVVDMFCTSMID 127
Query: 119 VARQFGIYGAAMMTNSAS-------VCSMYWQINHGLLTLPVNQETVPLTLPGLPS-LAS 170
VA +FG+ T++A+ V +Y + + + L + E L +P L
Sbjct: 128 VANEFGVPSYMFYTSNATFLGLQLHVQMLYDEKKYDVSELE-DSEVE-LDVPSLTRPYPV 185
Query: 171 SDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLG----LWPLV 226
LPS L + +L L Q + +L N+ ELE + L+ G L P+
Sbjct: 186 KCLPSVLL----SKEWLPLFLAQARRFREMKGILVNTVAELEPQALKFFSGSSGDLPPVY 241
Query: 227 MIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQ 286
+GP+ L + +GD + + + +RWL +P KSV+++ FGSM + Q
Sbjct: 242 PVGPV-----LHLENSGD-----DSKDEKQSEILRWLDEQPPKSVVFLCFGSMGGFSEEQ 291
Query: 287 VDEIARGLKASEKPFLWVVKEN---------------ENKLPVEFVNSVGETGLVVRWCN 331
EIA L+ S FLW ++ E LP F++ + G V+ W
Sbjct: 292 AREIAIALERSGHRFLWSLRRASPNIMKEPPGEFTNLEEILPEGFLDRTKDIGKVIGWAP 351
Query: 332 QFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNA-KFVEEVWEVGVRAK 390
Q VLA A+G F+THCGWNSILE L GV + A P +++Q NA + VEE+ + V +
Sbjct: 352 QVAVLAKPAIGGFVTHCGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEEL-GLAVEIR 410
Query: 391 KNRAG--------IVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKN 442
K G VT EE+ + + +M E+ +++ V + E A+ GGSS
Sbjct: 411 KYWRGDLLAGEMETVTAEEIERGIRCLM--EQDSDVRKRVKEMSEKCHVALMDGGSSHTA 468
Query: 443 IDEFV 447
+ +F+
Sbjct: 469 LKKFI 473
|
Length = 481 |
| >gnl|CDD|177857 PLN02207, PLN02207, UDP-glycosyltransferase | Back alignment and domain information |
|---|
Score = 146 bits (370), Expect = 5e-39
Identities = 132/480 (27%), Positives = 225/480 (46%), Gaps = 63/480 (13%)
Query: 8 VHVLVLTYPAQGHINPLLQFAKRLASK--RVKATL------ATTHYT--VKSIHATTVGV 57
++ + P GH+ P L+FA+RL + R++ T+ +H VKSI ++
Sbjct: 4 AELIFIPTPTVGHLVPFLEFARRLIEQDDRIRITILLMKLQGQSHLDTYVKSIASS---- 59
Query: 58 EPISDGFDEGGFKQAP------SVKAYLESFKTVGSRTLAEVILKYKDSES----PVNCI 107
+P D ++ P SV+AY+ + +++ S + V
Sbjct: 60 QPFVRFIDVPELEEKPTLGGTQSVEAYVYDVIEKNIPLVRNIVMDILSSLALDGVKVKGF 119
Query: 108 VYDSLLTWALDVARQFGI-YGAAMMTNSASVCSM-YWQINHGLLT--LPVNQETVPLTLP 163
V D +DVA+ + + + TNS + M Y H T N E + L++P
Sbjct: 120 VADFFCLPMIDVAKDVSLPFYVFLTTNSGFLAMMQYLADRHSKDTSVFVRNSEEM-LSIP 178
Query: 164 GLPS-LASSDLPSFLAQPASNPAYLA-AILEQFGSLNKNDWVLCNSFEELEKELLRAMLG 221
G + + ++ LPS L AY+ AIL K + +L NS ++E + L
Sbjct: 179 GFVNPVPANVLPSALFVEDGYDAYVKLAIL-----FTKANGILVNSSFDIEPYSVNHFLD 233
Query: 222 L--WPLV-MIGPLV-PSA--YLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVS 275
+P V +GP+ A + +Q +A D+ M+WL +PE SV+++
Sbjct: 234 EQNYPSVYAVGPIFDLKAQPHPEQDLA------------RRDELMKWLDDQPEASVVFLC 281
Query: 276 FGSMADIAANQVDEIARGLKASEKPFLWVVKE----NENKLPVEFVNSVGETGLVVRWCN 331
FGSM + V EIA GL+ + FLW ++ N++ LP F++ V G++ W
Sbjct: 282 FGSMGRLRGPLVKEIAHGLELCQYRFLWSLRTEEVTNDDLLPEGFLDRVSGRGMICGWSP 341
Query: 332 QFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKK 391
Q E+LAH+AVG F++HCGWNSI+E L GV +V P +++Q NA + + ++ V K
Sbjct: 342 QVEILAHKAVGGFVSHCGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKL 401
Query: 392 N----RAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFV 447
+ IV E+ + VM+ + + +++ V + ++A GGSS I++F+
Sbjct: 402 DYRVHSDEIVNANEIETAIRCVMNKD-NNVVRKRVMDISQMIQRATKNGGSSFAAIEKFI 460
|
Length = 468 |
| >gnl|CDD|178572 PLN02992, PLN02992, coniferyl-alcohol glucosyltransferase | Back alignment and domain information |
|---|
Score = 142 bits (358), Expect = 2e-37
Identities = 125/478 (26%), Positives = 214/478 (44%), Gaps = 67/478 (14%)
Query: 9 HVLVLTYPAQGHINPLLQFAKRLASKR----VKATLATTHYTVKSIHATTVGVE------ 58
H + + P GH+ P+++ KRL++ L T + +S + GV+
Sbjct: 7 HAAMFSSPGMGHVIPVIELGKRLSANHGFHVTVFVLETDAASAQSKFLNSTGVDIVGLPS 66
Query: 59 -PISDGFDEGGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWAL 117
IS D E+ T+ S+ + P IV D T AL
Sbjct: 67 PDISGLVDPSAHVVTKIGVIMREAVPTLRSKIAEM-------HQKPTALIV-DLFGTDAL 118
Query: 118 DVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETV----PLTLPGLPSLASSD- 172
+ +F + + ++A + I + L + +E PL +PG + D
Sbjct: 119 CLGGEFNMLTYIFIASNARFLGV--SIYYPTLDKDIKEEHTVQRKPLAMPGCEPVRFEDT 176
Query: 173 LPSFLAQPASNPAYLAAILEQFGS-LNKNDWVLCNSFEELEKELLRAMLG--LWPLVMIG 229
L ++L P Y + + G K D +L N++EE+E + L+++ L V
Sbjct: 177 LDAYLV--PDEPVYRDFV--RHGLAYPKADGILVNTWEEMEPKSLKSLQDPKLLGRVARV 232
Query: 230 PLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDE 289
P+ P L + I T + WL +P +SV+Y+SFGS ++A Q+ E
Sbjct: 233 PVYPIGPLCRPIQSSK---------TDHPVLDWLNKQPNESVLYISFGSGGSLSAKQLTE 283
Query: 290 IARGLKASEKPFLWVVK---------------------ENENKLPVEFVNSVGETGLVV- 327
+A GL+ S++ F+WVV+ LP FV+ + G VV
Sbjct: 284 LAWGLEMSQQRFVWVVRPPVDGSACSAYFSANGGETRDNTPEYLPEGFVSRTHDRGFVVP 343
Query: 328 RWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGV 387
W Q E+LAHQAVG F+THCGW+S LE + GV ++A P F++Q NA + + + V
Sbjct: 344 SWAPQAEILAHQAVGGFLTHCGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAV 403
Query: 388 RAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVS--AGGSSDKNI 443
R+ + +++ ++ V +VM E ++++R V K R+ A+ ++S GG + +++
Sbjct: 404 RSDDPK-EVISRSKIEALVRKVMVEEEGEEMRRKVKKLRDTAEMSLSIDGGGVAHESL 460
|
Length = 481 |
| >gnl|CDD|178275 PLN02670, PLN02670, transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Score = 119 bits (300), Expect = 2e-29
Identities = 113/490 (23%), Positives = 212/490 (43%), Gaps = 63/490 (12%)
Query: 6 ERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT----------------HYTVKS 49
E +HV + + A GH+ P L+ +K LA K K + +T T+ S
Sbjct: 5 EVLHVAMFPWLAMGHLIPFLRLSKLLAQKGHKISFISTPRNLHRLPKIPSQLSSSITLVS 64
Query: 50 IHATTV-GVEPISDGFDEGGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIV 108
+V G+ ++ + + + +K + L + + ++ P + I+
Sbjct: 65 FPLPSVPGLPSSAESSTDVPYTKQQLLKKAFD--------LLEPPLTTFLETSKP-DWII 115
Query: 109 YDSLLTWALDVARQFGIYGAAM-MTNSASVCSM---YWQINHGLLTL-PVNQETVPLTLP 163
YD W +A + GI A + +A++ + + G L + VP +P
Sbjct: 116 YDYASHWLPSIAAELGISKAFFSLFTAATLSFIGPPSSLMEGGDLRSTAEDFTVVPPWVP 175
Query: 164 GLPSLA--SSDLPSFLAQPASNPAYLAAILEQFG-SLNKNDWVLCNSFEELEKELLRAML 220
++ ++ ++ + + + + +FG ++ +D V+ S E E E +
Sbjct: 176 FESNIVFRYHEVTKYVEKTEEDETGPSDSV-RFGFAIGGSDVVIIRSSPEFEPEWFDLLS 234
Query: 221 GLW--PLVMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGS 278
L+ P++ IG L P D++ D W + WL + SV+YV+ G+
Sbjct: 235 DLYRKPIIPIGFLPPVIEDDEE---DDTIDVKGWV----RIKEWLDKQRVNSVVYVALGT 287
Query: 279 MADIAANQVDEIARGLKASEKPFLWVVK-------ENENKLPVEFVNSVGETGLV-VRWC 330
A + +V E+A GL+ SE PF WV++ LP F V G++ V W
Sbjct: 288 EASLRREEVTELALGLEKSETPFFWVLRNEPGTTQNALEMLPDGFEERVKGRGMIHVGWV 347
Query: 331 NQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAK 390
Q ++L+H++VG F+THCGWNS++EGL G ++ P ++Q N + + ++G+
Sbjct: 348 PQVKILSHESVGGFLTHCGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGK-KLGLEVP 406
Query: 391 KN-RAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNID--EFV 447
++ R G T + V + R + + R+ AK+ + G D+N + +
Sbjct: 407 RDERDGSFTSD-------SVAESVRLAMVDDAGEEIRDKAKEMRNLFGDMDRNNRYVDEL 459
Query: 448 VRLLKADGKS 457
V L+ + S
Sbjct: 460 VHYLRENRSS 469
|
Length = 472 |
| >gnl|CDD|178589 PLN03015, PLN03015, UDP-glucosyl transferase | Back alignment and domain information |
|---|
Score = 119 bits (298), Expect = 3e-29
Identities = 119/488 (24%), Positives = 212/488 (43%), Gaps = 74/488 (15%)
Query: 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDEGG 68
H L++ P GH+ P+L+ RL+S + T V S ++ E I
Sbjct: 5 HALLVASPGLGHLIPILELGNRLSSV---LNIHVTILAVTSGSSSPTETEAIHAAAARTT 61
Query: 69 FKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPV-----------NCIVYDSLLTWAL 117
+ +++ + ++++K + + V ++ D T +
Sbjct: 62 CQITEIPSVDVDNLVEPDATIFTKMVVKMRAMKPAVRDAVKSMKRKPTVMIVDFFGTALM 121
Query: 118 DVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETV---------PLTLPGLPSL 168
+A G + + S W + ++ LPV V PL +PG +
Sbjct: 122 SIADDVG-----VTAKYVYIPSHAWFLAV-MVYLPVLDTVVEGEYVDIKEPLKIPGCKPV 175
Query: 169 ASSDLPSFLAQPASNPAYLAAILEQFG-SLNKNDWVLCNSFEELEKELLRAM-------- 219
+L + S+ Y + + G + +D VL N++EEL+ L A+
Sbjct: 176 GPKELMETMLD-RSDQQYKECV--RSGLEVPMSDGVLVNTWEELQGNTLAALREDMELNR 232
Query: 220 LGLWPLVMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSM 279
+ P+ IGP+V + ++ + WL + E+SV+YV GS
Sbjct: 233 VMKVPVYPIGPIVRTNVHVEKR---------------NSIFEWLDKQGERSVVYVCLGSG 277
Query: 280 ADIAANQVDEIARGLKASEKPFLWVVK--------------ENENKLPVEFVNSVGETGL 325
+ Q E+A GL+ S + F+WV++ + LP F++ GL
Sbjct: 278 GTLTFEQTVELAWGLELSGQRFVWVLRRPASYLGASSSDDDQVSASLPEGFLDRTRGVGL 337
Query: 326 VV-RWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWE 384
VV +W Q E+L+H+++G F++HCGW+S+LE L+ GV +VA P +++Q NA + E
Sbjct: 338 VVTQWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIG 397
Query: 385 VGVRAKKNRAGIVTG-EELNKCVNEVM--DGERSQKIKRNVSKWREFAKKAVSAGGSSDK 441
V VR + + V G EE+ V +++ + E QKI+ + R +++A S GGSS
Sbjct: 398 VAVRTSELPSEKVIGREEVASLVRKIVAEEDEEGQKIRAKAEEVRVSSERAWSHGGSSYN 457
Query: 442 NIDEFVVR 449
++ E+ R
Sbjct: 458 SLFEWAKR 465
|
Length = 470 |
| >gnl|CDD|99960 cd03784, GT1_Gtf_like, This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Score = 117 bits (295), Expect = 5e-29
Identities = 71/437 (16%), Positives = 119/437 (27%), Gaps = 69/437 (15%)
Query: 9 HVLVLTYPAQGHINPLLQFAKRLASK--RVKATLATTHYTVKSIHATTVGVEPISDGFDE 66
VL+ T ++G + PL+ A L + V +AT + G+E + G D
Sbjct: 2 RVLITTIGSRGDVQPLVALAWALRAAGHEV--RVATPPEFADLV--EAAGLEFVPVGGDP 57
Query: 67 GGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSE----------SPVNCIVYDSLLTWA 116
+P A L ++ + ++ + +V D L
Sbjct: 58 DELLASPERNAGLLLLGPGLLLGALRLLRREAEAMLDDLVAAARDWGPDLVVADPLAFAG 117
Query: 117 LDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPGLPSLASSDLPSF 176
A GI ++ + S + G +L L
Sbjct: 118 AVAAEALGIPAVRLLLGPDTPTSAF------------------PPPLGRANLRLYALLEA 159
Query: 177 LAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLV---- 232
A+L A + G L L + L P V
Sbjct: 160 ELWQDLLGAWLRARRRRLG---------------LPPLSLLDGSDVPELYGFSPAVLPPP 204
Query: 233 -PSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMA-DIAANQVDEI 290
D P + WL + +YV FGSM
Sbjct: 205 PDWPRFDLVTGYGFRDVPYNGPPPPEL---WLFLAAGRPPVYVGFGSMVVRDPEALARLD 261
Query: 291 ARGLKASEKPFLWVVKENENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGW 350
+ + + + + + VV + +L + H G
Sbjct: 262 VEAVATLGQRAILSLGWGGLGAE-----DLPDNVRVVDFVPHDWLLPR--CAAVVHHGGA 314
Query: 351 NSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVM 410
+ L GV + VP F DQP A V E G +T E L + ++
Sbjct: 315 GTTAAALRAGVPQLVVPFFGDQPFWAARVAE-LGAGPALDPRE---LTAERLAAALRRLL 370
Query: 411 DGERSQKIKRNVSKWRE 427
D ++ + + RE
Sbjct: 371 DPPSRRRAAALLRRIRE 387
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. Length = 401 |
| >gnl|CDD|178364 PLN02764, PLN02764, glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 110 bits (276), Expect = 2e-26
Identities = 116/475 (24%), Positives = 197/475 (41%), Gaps = 67/475 (14%)
Query: 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIH------------ATT 54
+ HVL+ + A GH+ P L A +LA K T +K + + T
Sbjct: 5 KFHVLMYPWFATGHMTPFLFLANKLAEKGHTVTFLLPKKALKQLEHLNLFPHNIVFRSVT 64
Query: 55 VGVEPISDGFDEGG--FKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSL 112
V P DG G + P A L +R EV+++ + + +++
Sbjct: 65 V---PHVDGLPVGTETVSEIPVTSADLLMSAMDLTRDQVEVVVRAVEPD-----LIFFDF 116
Query: 113 LTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPGLPS----L 168
W +VAR FG+ + SAS + + +P + VP PG PS L
Sbjct: 117 AHWIPEVARDFGLKTVKYVVVSASTIAS--------MLVPGGELGVPP--PGYPSSKVLL 166
Query: 169 ASSDLPSFLAQPASNPAYLAA-ILEQFG-SLNKNDWVLCNSFEELEKELLRAMLGLW--P 224
D + +N + +LE+ SL +D + + E+E +
Sbjct: 167 RKQDAYTMKNLEPTNTIDVGPNLLERVTTSLMNSDVIAIRTAREIEGNFCDYIEKHCRKK 226
Query: 225 LVMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAA 284
+++ GP+ P +++ ++ ++WL+ SV++ + GS +
Sbjct: 227 VLLTGPVFPEPDKTRELE--------------ERWVKWLSGYEPDSVVFCALGSQVILEK 272
Query: 285 NQVDEIARGLKASEKPFLWVVKEN------ENKLPVEFVNSVGETGLVV-RWCNQFEVLA 337
+Q E+ G++ + PFL VK + LP F V G+V W Q +L+
Sbjct: 273 DQFQELCLGMELTGSPFLVAVKPPRGSSTIQEALPEGFEERVKGRGVVWGGWVQQPLILS 332
Query: 338 HQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIV 397
H +VGCF++HCG+ S+ E L +V VPQ DQ N + + + +V V + G
Sbjct: 333 HPSVGCFVSHCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREETGWF 392
Query: 398 TGEELNKCVNEVM--DGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRL 450
+ E L +N VM D E +K+N +KWRE +++ G +D F+ L
Sbjct: 393 SKESLRDAINSVMKRDSEIGNLVKKNHTKWRE----TLASPGLLTGYVDNFIESL 443
|
Length = 453 |
| >gnl|CDD|201077 pfam00201, UDPGT, UDP-glucoronosyl and UDP-glucosyl transferase | Back alignment and domain information |
|---|
Score = 97.9 bits (244), Expect = 7e-22
Identities = 42/147 (28%), Positives = 65/147 (44%), Gaps = 12/147 (8%)
Query: 268 EKSVIYVSFGSMA-DIAANQVDEIARGLKASEKPFLWVVKENENKLPVEFVNSVGETGLV 326
E V+ S GSM +I + +EIA L + LW P +++G +
Sbjct: 275 EHGVVVFSLGSMVSNIPEEKANEIASALAQIPQKVLWRFDG---TKP----STLGRNTRL 327
Query: 327 VRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVG 386
V+W Q ++L H F+TH G N + E + GV +V +P F DQ NAK +E
Sbjct: 328 VKWLPQNDLLGHPKTRAFVTHAGSNGVYEAICHGVPMVGMPLFGDQMDNAKHMEAKG-AA 386
Query: 387 VRAKKNRAGIVTGEELNKCVNEVMDGE 413
V +T E+L + V++
Sbjct: 387 VTLN---VLTMTSEDLLNALKTVINDP 410
|
Length = 500 |
| >gnl|CDD|177807 PLN00414, PLN00414, glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 95.1 bits (236), Expect = 3e-21
Identities = 115/468 (24%), Positives = 183/468 (39%), Gaps = 61/468 (13%)
Query: 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVK----------SIHATTVG 56
+ H + + GH+ P L A +LA K + T K SI +
Sbjct: 4 KFHAFMYPWFGFGHMIPYLHLANKLAEKGHRVTFFLPKKAHKQLQPLNLFPDSIVFEPLT 63
Query: 57 VEPISDGFDEGGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWA 116
+ P+ DG G + A + + L + I + P + I +D + W
Sbjct: 64 LPPV-DGLPFGA-ETASDLPNSTKKPIFDAMDLLRDQIEAKVRALKP-DLIFFD-FVHWV 119
Query: 117 LDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPGLPSLASSDLPSF 176
++A++FGI SA+ +M L P P P +
Sbjct: 120 PEMAKEFGIKSVNYQIISAACVAMVLAPRAELGFPP----------PDYPLSKVA----L 165
Query: 177 LAQPASNPAYLAAILEQFGSLNKN----DWVLCNSFEELEKELLRAMLGLW--PLVMIGP 230
A+ + A E FG + K D V + ELE L + +++ GP
Sbjct: 166 RGHDANVCSLFANSHELFGLITKGLKNCDVVSIRTCVELEGNLCDFIERQCQRKVLLTGP 225
Query: 231 LVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEI 290
++P Q +G +P D+ WL SV++ +FG+ +Q E
Sbjct: 226 MLPEP---QNKSG---------KPLEDRWNHWLNGFEPGSVVFCAFGTQFFFEKDQFQEF 273
Query: 291 ARGLKASEKPFLWVV------KENENKLPVEFVNSVGETGLVVR-WCNQFEVLAHQAVGC 343
G++ + PFL V + LP F V G+V W Q +L+H +VGC
Sbjct: 274 CLGMELTGLPFLIAVMPPKGSSTVQEALPEGFEERVKGRGIVWEGWVEQPLILSHPSVGC 333
Query: 344 FITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELN 403
F+ HCG+ S+ E L +V +PQ +DQ + + E EV V+ ++ +G + E L
Sbjct: 334 FVNHCGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGWFSKESLR 393
Query: 404 KCVNEVMD--GERSQKIKRNVSKWREFAKKAVSAG---GSSDKNIDEF 446
V VMD E +KRN K +E VS G G +DK ++
Sbjct: 394 DTVKSVMDKDSEIGNLVKRNHKKLKE---TLVSPGLLSGYADKFVEAL 438
|
Length = 446 |
| >gnl|CDD|177858 PLN02208, PLN02208, glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 87.8 bits (217), Expect = 1e-18
Identities = 55/184 (29%), Positives = 90/184 (48%), Gaps = 9/184 (4%)
Query: 253 EPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKEN---- 308
+P +Q +L+ P KSV++ S GS + +Q E+ G++ + PFL VK
Sbjct: 235 KPLEEQWSHFLSGFPPKSVVFCSLGSQIILEKDQFQELCLGMELTGLPFLIAVKPPRGSS 294
Query: 309 --ENKLPVEFVNSVGETGLVVR-WCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVA 365
+ LP F V G+V W Q +L H ++GCF+ HCG +I E L +V
Sbjct: 295 TVQEGLPEGFEERVKGRGVVWGGWVQQPLILDHPSIGCFVNHCGPGTIWESLVSDCQMVL 354
Query: 366 VPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERS--QKIKRNVS 423
+P SDQ + + E +EV V + + G + E L+ + VMD + + ++ N +
Sbjct: 355 IPFLSDQVLFTRLMTEEFEVSVEVSREKTGWFSKESLSNAIKSVMDKDSDLGKLVRSNHT 414
Query: 424 KWRE 427
K +E
Sbjct: 415 KLKE 418
|
Length = 442 |
| >gnl|CDD|224732 COG1819, COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Score = 83.6 bits (207), Expect = 2e-17
Identities = 97/461 (21%), Positives = 155/461 (33%), Gaps = 84/461 (18%)
Query: 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSI-HATTVGVE-PISDGF 64
R+ +L + A GH+NP L K L + + A+T + + A V PI D
Sbjct: 1 RMKILFVVCGAYGHVNPCLALGKELRRRGHEVVFASTGKFKEFVEAAGLAFVAYPIRDSE 60
Query: 65 DEGGFKQAPSVKAYLESFKT--VGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQ 122
+ VK++ + R L E++ + + +V D AR
Sbjct: 61 LATEDGKFAGVKSFRRLLQQFKKLIRELLELLRELE------PDLVVDDARLSLGLAARL 114
Query: 123 FGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPGLPSLASSDLPSFLAQPAS 182
GI N A + + +PL P P L + + P
Sbjct: 115 LGIPVVG--INVAPYTPLPAAGLPLPPVGIAGKLPIPL-YPLPPRLVRPLIFARSWLP-- 169
Query: 183 NPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAYLD-QQI 241
K E + R GPL+ AY D
Sbjct: 170 ----------------KLVVRRNLGLELGLPNIRRLF-------ASGPLLEIAYTDVLFP 206
Query: 242 AGD------SAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLK 295
GD G + E + ++ ++YVS G++ N V+ +A L+
Sbjct: 207 PGDRLPFIGPYIGPLLGEAANE---LPYWIPADRPIVYVSLGTVG----NAVELLAIVLE 259
Query: 296 ASEKPFLWVVKENENKLPVEFVNSVG----------ETGLVVRWCNQFEVLAHQAVGCFI 345
A L V + S+G + +V + Q E+L I
Sbjct: 260 AL------------ADLDVRVIVSLGGARDTLVNVPDNVIVADYVPQLELLPRADA--VI 305
Query: 346 THCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKC 405
H G + E L GV +V +P +DQP NA+ VEE+ G+ +T E L
Sbjct: 306 HHGGAGTTSEALYAGVPLVVIPDGADQPLNAERVEEL-GAGIALPFEE---LTEERLRAA 361
Query: 406 VNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEF 446
VNEV+ +R + E K+ ++D ++EF
Sbjct: 362 VNEVLA---DDSYRRAAERLAEEFKEEDGPAKAADL-LEEF 398
|
Length = 406 |
| >gnl|CDD|233407 TIGR01426, MGT, glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Score = 75.1 bits (185), Expect = 1e-14
Identities = 98/442 (22%), Positives = 148/442 (33%), Gaps = 87/442 (19%)
Query: 16 PAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDEGGFKQ---- 71
PA GH+NP L + L ++ + T ATT + + A G E + G
Sbjct: 4 PAHGHVNPTLGVVEELVARGHRVTYATTEEFAERVEAA--GAEFVLYGSALPPPDNPPEN 61
Query: 72 -APSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAM 130
+E L ++ YK + IVYD +AR++ +
Sbjct: 62 TEEEPIDIIEKLLDEAEDVLPQLEEAYKGDRPDL--IVYDIASWTGRLLARKWDV----- 114
Query: 131 MTNSASVCSMYWQINHGLLTLPVNQETVPLTLPGLPSLASSDLPSFLAQPASNPAYLAAI 190
S + N+E + P A + L+A+
Sbjct: 115 --PVISSFPTFAA----------NEEFEEMVSPAGEGSAEEGAIAERGLAEYVAR-LSAL 161
Query: 191 LEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAYLDQQIAG---DSAY 247
LE+ G E L A LV P A+ Q AG D ++
Sbjct: 162 LEEHG------------ITTPPVEFLAAPRRDLNLVYT----PKAF---QPAGETFDDSF 202
Query: 248 ---GANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWV 304
G I + D W + V+ +S G+ N R + + W
Sbjct: 203 TFVGPCIGDRKED--GSWERPGDGRPVVLISLGT----VFNNQPSFYRTCVEAFRDLDWH 256
Query: 305 V---------KENENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILE 355
V + +LP V +W Q E+L FITH G NS +E
Sbjct: 257 VVLSVGRGVDPADLGELPPNV--------EVRQWVPQLEILKKADA--FITHGGMNSTME 306
Query: 356 GLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERS 415
L GV +VAVPQ +DQP A + E+G+ + VT E+L + V V+
Sbjct: 307 ALFNGVPMVAVPQGADQPMTA---RRIAELGL-GRHLPPEEVTAEKLREAVLAVLS---D 359
Query: 416 QKIKRNVSKWREFAKKAVSAGG 437
+ + K R + AGG
Sbjct: 360 PRYAERLRKMR---AEIREAGG 378
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production [Cellular processes, Toxin production and resistance]. Length = 392 |
| >gnl|CDD|223071 PHA03392, egt, ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 60.4 bits (147), Expect = 9e-10
Identities = 41/171 (23%), Positives = 66/171 (38%), Gaps = 20/171 (11%)
Query: 261 RWLATKPEKSVIYVSFGSM---ADIAANQVDEIARGLKASEKPFLWVVKE--NENKLPVE 315
V+YVSFGS D+ + + R K LW LP
Sbjct: 288 EEFLNNSTNGVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLPYNVLWKYDGEVEAINLP-- 345
Query: 316 FVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTN 375
+V L +W Q VL H+ V F+T G S E + V +V +P DQ N
Sbjct: 346 --ANV----LTQKWFPQRAVLKHKNVKAFVTQGGVQSTDEAIDALVPMVGLPMMGDQFYN 399
Query: 376 AKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWR 426
+ E+G+ + V+ +L + +V++ K ++N+ + R
Sbjct: 400 T---NKYVELGI-GRALDTVTVSAAQLVLAIVDVIENP---KYRKNLKELR 443
|
Length = 507 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 459 | |||
| PLN02555 | 480 | limonoid glucosyltransferase | 100.0 | |
| PLN02173 | 449 | UDP-glucosyl transferase family protein | 100.0 | |
| PLN02410 | 451 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 100.0 | |
| PLN02562 | 448 | UDP-glycosyltransferase | 100.0 | |
| PLN02210 | 456 | UDP-glucosyl transferase | 100.0 | |
| PLN02152 | 455 | indole-3-acetate beta-glucosyltransferase | 100.0 | |
| PLN02207 | 468 | UDP-glycosyltransferase | 100.0 | |
| PLN02554 | 481 | UDP-glycosyltransferase family protein | 100.0 | |
| PLN02992 | 481 | coniferyl-alcohol glucosyltransferase | 100.0 | |
| PLN02448 | 459 | UDP-glycosyltransferase family protein | 100.0 | |
| PLN02863 | 477 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 100.0 | |
| PLN00164 | 480 | glucosyltransferase; Provisional | 100.0 | |
| PLN03015 | 470 | UDP-glucosyl transferase | 100.0 | |
| PLN03004 | 451 | UDP-glycosyltransferase | 100.0 | |
| PLN02670 | 472 | transferase, transferring glycosyl groups | 100.0 | |
| PLN02764 | 453 | glycosyltransferase family protein | 100.0 | |
| PLN02167 | 475 | UDP-glycosyltransferase family protein | 100.0 | |
| PLN03007 | 482 | UDP-glucosyltransferase family protein | 100.0 | |
| PLN02534 | 491 | UDP-glycosyltransferase | 100.0 | |
| PLN02208 | 442 | glycosyltransferase family protein | 100.0 | |
| PLN00414 | 446 | glycosyltransferase family protein | 100.0 | |
| PHA03392 | 507 | egt ecdysteroid UDP-glucosyltransferase; Provision | 100.0 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 100.0 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 100.0 | |
| PF00201 | 500 | UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera | 100.0 | |
| COG1819 | 406 | Glycosyl transferases, related to UDP-glucuronosyl | 100.0 | |
| KOG1192 | 496 | consensus UDP-glucuronosyl and UDP-glucosyl transf | 100.0 | |
| PRK12446 | 352 | undecaprenyldiphospho-muramoylpentapeptide beta-N- | 99.96 | |
| PF13528 | 318 | Glyco_trans_1_3: Glycosyl transferase family 1 | 99.95 | |
| TIGR00661 | 321 | MJ1255 conserved hypothetical protein. This model | 99.93 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 99.92 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.87 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.84 | |
| COG4671 | 400 | Predicted glycosyl transferase [General function p | 99.81 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.78 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 99.75 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 99.71 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.67 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 99.61 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.58 | |
| PF04101 | 167 | Glyco_tran_28_C: Glycosyltransferase family 28 C-t | 99.55 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.48 | |
| PF03033 | 139 | Glyco_transf_28: Glycosyltransferase family 28 N-t | 99.48 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 99.41 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 99.4 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 99.39 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 99.34 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 99.34 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 99.27 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 99.26 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 99.26 | |
| COG3980 | 318 | spsG Spore coat polysaccharide biosynthesis protei | 99.25 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 99.25 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 99.24 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 99.22 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 99.22 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 99.2 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 99.19 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.16 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 99.14 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 99.08 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 99.08 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 99.07 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.07 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 99.06 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 99.02 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 99.02 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 98.99 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 98.99 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 98.98 | |
| PF04007 | 335 | DUF354: Protein of unknown function (DUF354); Inte | 98.96 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 98.96 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 98.95 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 98.94 | |
| PRK14089 | 347 | ipid-A-disaccharide synthase; Provisional | 98.93 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 98.88 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 98.86 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 98.86 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 98.82 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 98.82 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 98.79 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 98.77 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 98.77 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 98.75 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 98.68 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 98.68 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 98.67 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 98.62 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 98.6 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 98.6 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 98.56 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 98.54 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 98.54 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 98.52 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 98.5 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 98.49 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 98.47 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 98.46 | |
| PLN00142 | 815 | sucrose synthase | 98.44 | |
| KOG3349 | 170 | consensus Predicted glycosyltransferase [General f | 98.42 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 98.34 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 98.3 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 98.26 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 98.23 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 98.23 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 98.17 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 98.15 | |
| PLN02316 | 1036 | synthase/transferase | 98.13 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 98.06 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 98.04 | |
| COG1817 | 346 | Uncharacterized protein conserved in archaea [Func | 98.03 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 98.0 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 97.97 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 97.92 | |
| COG5017 | 161 | Uncharacterized conserved protein [Function unknow | 97.84 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 97.78 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 97.69 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 97.61 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 97.6 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 97.53 | |
| TIGR02193 | 319 | heptsyl_trn_I lipopolysaccharide heptosyltransfera | 97.5 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 97.46 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 97.19 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 97.07 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 97.0 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 96.98 | |
| PRK10017 | 426 | colanic acid biosynthesis protein; Provisional | 96.96 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 96.96 | |
| PF13477 | 139 | Glyco_trans_4_2: Glycosyl transferase 4-like | 96.83 | |
| TIGR02201 | 344 | heptsyl_trn_III lipopolysaccharide heptosyltransfe | 96.8 | |
| PRK10916 | 348 | ADP-heptose:LPS heptosyltransferase II; Provisiona | 96.65 | |
| PRK10422 | 352 | lipopolysaccharide core biosynthesis protein; Prov | 96.65 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 96.62 | |
| PRK10964 | 322 | ADP-heptose:LPS heptosyl transferase I; Provisiona | 96.6 | |
| PF06722 | 97 | DUF1205: Protein of unknown function (DUF1205); In | 96.56 | |
| cd03789 | 279 | GT1_LPS_heptosyltransferase Lipopolysaccharide hep | 96.47 | |
| TIGR02195 | 334 | heptsyl_trn_II lipopolysaccharide heptosyltransfer | 96.18 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 96.09 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 95.98 | |
| PF01975 | 196 | SurE: Survival protein SurE; InterPro: IPR002828 T | 95.94 | |
| COG0859 | 334 | RfaF ADP-heptose:LPS heptosyltransferase [Cell env | 95.88 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 95.69 | |
| PF12000 | 171 | Glyco_trans_4_3: Gkycosyl transferase family 4 gro | 95.56 | |
| COG3914 | 620 | Spy Predicted O-linked N-acetylglucosamine transfe | 95.14 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 95.08 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 95.06 | |
| PRK13932 | 257 | stationary phase survival protein SurE; Provisiona | 94.03 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 93.89 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 93.72 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 93.5 | |
| PRK02261 | 137 | methylaspartate mutase subunit S; Provisional | 93.22 | |
| PF08660 | 170 | Alg14: Oligosaccharide biosynthesis protein Alg14 | 92.55 | |
| PRK13933 | 253 | stationary phase survival protein SurE; Provisiona | 92.26 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 92.23 | |
| COG0496 | 252 | SurE Predicted acid phosphatase [General function | 91.71 | |
| PRK13935 | 253 | stationary phase survival protein SurE; Provisiona | 91.67 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 91.58 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 91.51 | |
| COG0003 | 322 | ArsA Predicted ATPase involved in chromosome parti | 91.51 | |
| TIGR00087 | 244 | surE 5'/3'-nucleotidase SurE. E. coli SurE is Reco | 91.45 | |
| cd02067 | 119 | B12-binding B12 binding domain (B12-BD). This doma | 90.79 | |
| PF06258 | 311 | Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP | 90.37 | |
| COG4370 | 412 | Uncharacterized protein conserved in bacteria [Fun | 90.23 | |
| PRK00346 | 250 | surE 5'(3')-nucleotidase/polyphosphatase; Provisio | 90.06 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 89.47 | |
| PF02951 | 119 | GSH-S_N: Prokaryotic glutathione synthetase, N-ter | 89.45 | |
| COG1618 | 179 | Predicted nucleotide kinase [Nucleotide transport | 89.42 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 89.15 | |
| PF02374 | 305 | ArsA_ATPase: Anion-transporting ATPase; PDB: 2WOO_ | 88.95 | |
| COG3660 | 329 | Predicted nucleoside-diphosphate-sugar epimerase [ | 88.32 | |
| PRK02797 | 322 | 4-alpha-L-fucosyltransferase; Provisional | 88.02 | |
| PF02310 | 121 | B12-binding: B12 binding domain; InterPro: IPR0061 | 87.5 | |
| PF07355 | 349 | GRDB: Glycine/sarcosine/betaine reductase selenopr | 87.2 | |
| smart00851 | 90 | MGS MGS-like domain. This domain composes the whol | 86.81 | |
| PF02441 | 129 | Flavoprotein: Flavoprotein; InterPro: IPR003382 Th | 86.62 | |
| PF02571 | 249 | CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: | 85.24 | |
| cd00550 | 254 | ArsA_ATPase Oxyanion-translocating ATPase (ArsA). | 84.57 | |
| COG4088 | 261 | Predicted nucleotide kinase [Nucleotide transport | 84.36 | |
| PF05159 | 269 | Capsule_synth: Capsule polysaccharide biosynthesis | 83.38 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 83.12 | |
| PRK08057 | 248 | cobalt-precorrin-6x reductase; Reviewed | 82.92 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 82.41 | |
| COG2185 | 143 | Sbm Methylmalonyl-CoA mutase, C-terminal domain/su | 82.3 | |
| cd02070 | 201 | corrinoid_protein_B12-BD B12 binding domain of cor | 82.17 | |
| PF02142 | 95 | MGS: MGS-like domain This is a subfamily of this f | 81.21 | |
| cd00561 | 159 | CobA_CobO_BtuR ATP:corrinoid adenosyltransferase B | 80.72 | |
| cd01425 | 193 | RPS2 Ribosomal protein S2 (RPS2), involved in form | 80.57 | |
| TIGR02015 | 422 | BchY chlorophyllide reductase subunit Y. This mode | 80.09 |
| >PLN02555 limonoid glucosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-65 Score=504.11 Aligned_cols=448 Identities=38% Similarity=0.709 Sum_probs=356.3
Q ss_pred CCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCC-----------C---CceEEEcCCCCCC
Q 012645 1 MENQRERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHA-----------T---TVGVEPISDGFDE 66 (459)
Q Consensus 1 m~~~~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~-----------~---g~~~~~~~~~~~~ 66 (459)
|+.+.-+.||+++|+|++||++|++.||+.|+.+|..|||++++.+...+.+ . .++|..+|++++.
T Consensus 1 ~~~~~~~~HVv~~PfpaqGHi~Pml~lA~~La~~G~~vT~v~T~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~pdglp~ 80 (480)
T PLN02555 1 MESESSLVHVMLVSFPGQGHVNPLLRLGKLLASKGLLVTFVTTESWGKKMRQANKIQDGVLKPVGDGFIRFEFFEDGWAE 80 (480)
T ss_pred CCCCCCCCEEEEECCcccccHHHHHHHHHHHHhCCCeEEEEeccchhhhhhccccccccccccCCCCeEEEeeCCCCCCC
Confidence 7777778999999999999999999999999999999999999975543321 1 2566667776655
Q ss_pred CCCCCCCCHHHHHHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhc
Q 012645 67 GGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINH 146 (459)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~ 146 (459)
+.. ...+...++..+.....+.+.++++++.....++++||+|.++.|+..+|+++|||++.+++++++.+..+.+...
T Consensus 81 ~~~-~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~pv~ciV~D~~~~wa~~vA~~~gIP~~~F~t~~a~~~~~~~~~~~ 159 (480)
T PLN02555 81 DDP-RRQDLDLYLPQLELVGKREIPNLVKRYAEQGRPVSCLINNPFIPWVCDVAEELGIPSAVLWVQSCACFSAYYHYYH 159 (480)
T ss_pred Ccc-cccCHHHHHHHHHHhhhHHHHHHHHHHhccCCCceEEEECCcchHHHHHHHHcCCCeEEeecccHHHHHHHHHHhh
Confidence 422 1223444555555556777888887764322345999999999999999999999999999999998888777655
Q ss_pred cCCCCCCCC-CCCcccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcCCCe
Q 012645 147 GLLTLPVNQ-ETVPLTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPL 225 (459)
Q Consensus 147 ~~~~~p~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 225 (459)
+..+.+... .+.++.+|++|.+...+++.++............+.+......+++++++|||.+||+...+.+....++
T Consensus 160 ~~~~~~~~~~~~~~~~iPglp~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~~~l~~~~~v 239 (480)
T PLN02555 160 GLVPFPTETEPEIDVQLPCMPLLKYDEIPSFLHPSSPYPFLRRAILGQYKNLDKPFCILIDTFQELEKEIIDYMSKLCPI 239 (480)
T ss_pred cCCCcccccCCCceeecCCCCCcCHhhCcccccCCCCchHHHHHHHHHHHhcccCCEEEEEchHHHhHHHHHHHhhCCCE
Confidence 432222111 1234568999988888888766432223344445555566677889999999999999988888654469
Q ss_pred eeecccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEE
Q 012645 226 VMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVV 305 (459)
Q Consensus 226 ~~vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~ 305 (459)
+.|||+..... ... ...+...+. .++++.+||+.++++++|||||||+...+.+++.+++.+++..+.+|||++
T Consensus 240 ~~iGPl~~~~~----~~~-~~~~~~~~~-~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~~l~~~~~~flW~~ 313 (480)
T PLN02555 240 KPVGPLFKMAK----TPN-SDVKGDISK-PADDCIEWLDSKPPSSVVYISFGTVVYLKQEQIDEIAYGVLNSGVSFLWVM 313 (480)
T ss_pred EEeCcccCccc----ccc-ccccccccc-cchhHHHHHhCCCCCceeEEEeccccCCCHHHHHHHHHHHHhcCCeEEEEE
Confidence 99999975421 000 111122223 245699999999888899999999999999999999999999999999998
Q ss_pred eCCC-------CCCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHH
Q 012645 306 KENE-------NKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKF 378 (459)
Q Consensus 306 ~~~~-------~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~r 378 (459)
.... ..+|+++.++.++|+++++|+||.+||+|++|++||||||+||++||+++|||||++|++.||+.||++
T Consensus 314 ~~~~~~~~~~~~~lp~~~~~~~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~ 393 (480)
T PLN02555 314 RPPHKDSGVEPHVLPEEFLEKAGDKGKIVQWCPQEKVLAHPSVACFVTHCGWNSTMEALSSGVPVVCFPQWGDQVTDAVY 393 (480)
T ss_pred ecCcccccchhhcCChhhhhhcCCceEEEecCCHHHHhCCCccCeEEecCCcchHHHHHHcCCCEEeCCCccccHHHHHH
Confidence 7321 357888988889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhceEEeeecC--CCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhcC
Q 012645 379 VEEVWEVGVRAKKNR--AGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLLKADG 455 (459)
Q Consensus 379 v~~~~G~G~~~~~~~--~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~~~~~ 455 (459)
+++.||+|+.+.... .+.++.++|.++|+++|.+++++++|+||+++++.+++++.+||||..++++||+++.++.+
T Consensus 394 ~~~~~gvGv~l~~~~~~~~~v~~~~v~~~v~~vm~~~~g~~~r~ra~~l~~~a~~A~~egGSS~~~l~~~v~~i~~~~~ 472 (480)
T PLN02555 394 LVDVFKTGVRLCRGEAENKLITREEVAECLLEATVGEKAAELKQNALKWKEEAEAAVAEGGSSDRNFQEFVDKLVRKSV 472 (480)
T ss_pred HHHHhCceEEccCCccccCcCcHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhccc
Confidence 999889999994210 11689999999999999887788999999999999999999999999999999999987654
|
|
| >PLN02173 UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-65 Score=497.71 Aligned_cols=437 Identities=45% Similarity=0.853 Sum_probs=344.0
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCC---CCceEEEcCCCCCCCCCCCCCCHHHHHHHH
Q 012645 6 ERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHA---TTVGVEPISDGFDEGGFKQAPSVKAYLESF 82 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (459)
++.||+++|++++||++|++.||+.|+.+|+.|||++++.+...+.. +++.++.+|++++....+...+...++..+
T Consensus 4 ~~~hvv~~P~paqGHi~P~l~lAk~La~~G~~vT~v~t~~~~~~~~~~~~~~i~~~~ipdglp~~~~~~~~~~~~~~~~~ 83 (449)
T PLN02173 4 MRGHVLAVPFPSQGHITPIRQFCKRLHSKGFKTTHTLTTFIFNTIHLDPSSPISIATISDGYDQGGFSSAGSVPEYLQNF 83 (449)
T ss_pred CCcEEEEecCcccccHHHHHHHHHHHHcCCCEEEEEECCchhhhcccCCCCCEEEEEcCCCCCCcccccccCHHHHHHHH
Confidence 45799999999999999999999999999999999999976554432 469999999887763222233455566666
Q ss_pred HHhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCcccC
Q 012645 83 KTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTL 162 (459)
Q Consensus 83 ~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 162 (459)
.....+.+.++++++.....+.|+||+|.+..|+..+|+++|||++.+++++++....+.+...... ...+.+
T Consensus 84 ~~~~~~~~~~~l~~~~~~~~Pv~cvV~D~f~~Wa~dVA~elgIP~v~F~~~~a~~~~~~~~~~~~~~-------~~~~~~ 156 (449)
T PLN02173 84 KTFGSKTVADIIRKHQSTDNPITCIVYDSFMPWALDLAREFGLAAAPFFTQSCAVNYINYLSYINNG-------SLTLPI 156 (449)
T ss_pred HHhhhHHHHHHHHHhhccCCCceEEEECCcchhHHHHHHHhCCCEEEEechHHHHHHHHHhHHhccC-------CccCCC
Confidence 6566778888887764321234999999999999999999999999999988776655443221110 112348
Q ss_pred CCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcCCCeeeecccCCCcccccccc
Q 012645 163 PGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAYLDQQIA 242 (459)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vgp~~~~~~~~~~~~ 242 (459)
|++|.+...+++.++............+.+......+++++++|||+++|+...+.+....+++.|||+.+.........
T Consensus 157 pg~p~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~v~~VGPl~~~~~~~~~~~ 236 (449)
T PLN02173 157 KDLPLLELQDLPTFVTPTGSHLAYFEMVLQQFTNFDKADFVLVNSFHDLDLHENELLSKVCPVLTIGPTVPSMYLDQQIK 236 (449)
T ss_pred CCCCCCChhhCChhhcCCCCchHHHHHHHHHHhhhccCCEEEEeCHHHhhHHHHHHHHhcCCeeEEcccCchhhcccccc
Confidence 88888888888876643222222334444555667788999999999999998888865557999999975421111000
Q ss_pred CCccCCCCCCC-CChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCC-CCCchhhhhhc
Q 012645 243 GDSAYGANIWE-PTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENE-NKLPVEFVNSV 320 (459)
Q Consensus 243 ~~~~~g~~~~~-~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~-~~~~~~~~~~~ 320 (459)
.+...+...|. ..++.+.+||+.++++++|||||||+.....+++.+++.++ .+.+|+|++.... ..+|++|.++.
T Consensus 237 ~~~~~~~~~~~~~~~~~c~~WLd~~~~~svvyvsfGS~~~~~~~~~~ela~gL--s~~~flWvvr~~~~~~lp~~~~~~~ 314 (449)
T PLN02173 237 SDNDYDLNLFDLKEAALCTDWLDKRPQGSVVYIAFGSMAKLSSEQMEEIASAI--SNFSYLWVVRASEESKLPPGFLETV 314 (449)
T ss_pred ccccccccccccccchHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHh--cCCCEEEEEeccchhcccchHHHhh
Confidence 01111112222 23445899999998899999999999999999999999999 6778999998544 56888888887
Q ss_pred -CCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecC-CCccc
Q 012645 321 -GETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNR-AGIVT 398 (459)
Q Consensus 321 -~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~-~~~~~ 398 (459)
++|+++++|+||.+||+|+++++|||||||||++||+++|||||++|++.||+.||+++++.||+|+.+...+ ++.++
T Consensus 315 ~~~~~~i~~W~PQ~~iL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~~~~~~~~ 394 (449)
T PLN02173 315 DKDKSLVLKWSPQLQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAEKESGIAK 394 (449)
T ss_pred cCCceEEeCCCCHHHHhCCCccceEEecCccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeecccCCccc
Confidence 6889999999999999999999999999999999999999999999999999999999998779999887542 11369
Q ss_pred HHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012645 399 GEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLL 451 (459)
Q Consensus 399 ~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~ 451 (459)
.+.|.++++++|.+++++++|+||+++++++++++.+||||..++++|++++.
T Consensus 395 ~e~v~~av~~vm~~~~~~~~r~~a~~~~~~a~~Av~~gGSS~~~l~~~v~~~~ 447 (449)
T PLN02173 395 REEIEFSIKEVMEGEKSKEMKENAGKWRDLAVKSLSEGGSTDININTFVSKIQ 447 (449)
T ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHhc
Confidence 99999999999998778899999999999999999999999999999999874
|
|
| >PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-64 Score=492.71 Aligned_cols=432 Identities=29% Similarity=0.485 Sum_probs=342.7
Q ss_pred CCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCcccccc-C-CCCceEEEcCCCCCCCCCCCCCCHHHH
Q 012645 1 MENQRERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSI-H-ATTVGVEPISDGFDEGGFKQAPSVKAY 78 (459)
Q Consensus 1 m~~~~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~-~-~~g~~~~~~~~~~~~~~~~~~~~~~~~ 78 (459)
|+.+..+.||+++|++++||++|++.||+.|+.+|+.|||++++.+.... . ..++.+..+|++++.+..+.. ....+
T Consensus 1 ~~~~~~~~HVvlvPfpaqGHi~P~l~LAk~La~~G~~VT~v~T~~n~~~~~~~~~~i~~~~ip~glp~~~~~~~-~~~~~ 79 (451)
T PLN02410 1 MEEKPARRRVVLVPVPAQGHISPMMQLAKTLHLKGFSITIAQTKFNYFSPSDDFTDFQFVTIPESLPESDFKNL-GPIEF 79 (451)
T ss_pred CCcCCCCCEEEEECCCccccHHHHHHHHHHHHcCCCEEEEEeCcccccccccCCCCeEEEeCCCCCCccccccc-CHHHH
Confidence 77777888999999999999999999999999999999999998764211 1 147999999987765322221 23345
Q ss_pred HHHHHHhchHHHHHHHHHhhc-CCCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCC---CCCCC
Q 012645 79 LESFKTVGSRTLAEVILKYKD-SESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLL---TLPVN 154 (459)
Q Consensus 79 ~~~~~~~~~~~~~~l~~~~~~-~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~---~~p~~ 154 (459)
+..+...+.+.+.++++++.. ...++++||+|.+..|+..+|+++|||++.+++++++.+..+.+...... ..|..
T Consensus 80 ~~~~~~~~~~~~~~~L~~l~~~~~~p~~cVI~D~f~~Wa~dvA~~lgIP~v~F~t~~a~~~~~~~~~~~~~~~~~~~~~~ 159 (451)
T PLN02410 80 LHKLNKECQVSFKDCLGQLVLQQGNEIACVVYDEFMYFAEAAAKEFKLPNVIFSTTSATAFVCRSVFDKLYANNVLAPLK 159 (451)
T ss_pred HHHHHHHhHHHHHHHHHHHHhccCCCcEEEEECCcchHHHHHHHHcCCCEEEEEccCHHHHHHHHHHHHHHhccCCCCcc
Confidence 555555556677777777642 22367999999999999999999999999999999887766655321111 01111
Q ss_pred C--CCCcccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcC--CCeeeecc
Q 012645 155 Q--ETVPLTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGL--WPLVMIGP 230 (459)
Q Consensus 155 ~--~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~vgp 230 (459)
. .+....+|++|+++..+++..... ........+... ....+++++++|||++||+...+.+.+. .++++|||
T Consensus 160 ~~~~~~~~~iPg~~~~~~~dlp~~~~~--~~~~~~~~~~~~-~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~v~~vGp 236 (451)
T PLN02410 160 EPKGQQNELVPEFHPLRCKDFPVSHWA--SLESIMELYRNT-VDKRTASSVIINTASCLESSSLSRLQQQLQIPVYPIGP 236 (451)
T ss_pred ccccCccccCCCCCCCChHHCcchhcC--CcHHHHHHHHHH-hhcccCCEEEEeChHHhhHHHHHHHHhccCCCEEEecc
Confidence 1 112345888887777777754321 111222222222 2346788999999999999999888653 36999999
Q ss_pred cCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCC-
Q 012645 231 LVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENE- 309 (459)
Q Consensus 231 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~- 309 (459)
+..... . +...++ ...++.+||+.++++++|||||||....+.+.+.+++.+++.++.+|||++....
T Consensus 237 l~~~~~-----~-----~~~~~~-~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gLe~s~~~FlWv~r~~~~ 305 (451)
T PLN02410 237 LHLVAS-----A-----PTSLLE-ENKSCIEWLNKQKKNSVIFVSLGSLALMEINEVMETASGLDSSNQQFLWVIRPGSV 305 (451)
T ss_pred cccccC-----C-----Cccccc-cchHHHHHHHhCCCCcEEEEEccccccCCHHHHHHHHHHHHhcCCCeEEEEccCcc
Confidence 975310 0 001122 2345789999998899999999999999999999999999999999999998431
Q ss_pred ------CCCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhh
Q 012645 310 ------NKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVW 383 (459)
Q Consensus 310 ------~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~ 383 (459)
..+|++|.+++++|+++++|+||.+||+|+++++|||||||||++||+++|||||++|++.||+.||+++++.|
T Consensus 306 ~~~~~~~~lp~~f~er~~~~g~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~ 385 (451)
T PLN02410 306 RGSEWIESLPKEFSKIISGRGYIVKWAPQKEVLSHPAVGGFWSHCGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVW 385 (451)
T ss_pred cccchhhcCChhHHHhccCCeEEEccCCHHHHhCCCccCeeeecCchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHh
Confidence 24799999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred hceEEeeecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012645 384 EVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLL 451 (459)
Q Consensus 384 G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~ 451 (459)
|+|+.+. . .++.++|.++|+++|.++++++|++|++++++++++++.+||||..++++|++.+.
T Consensus 386 ~~G~~~~-~---~~~~~~v~~av~~lm~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~fv~~~~ 449 (451)
T PLN02410 386 KIGIQVE-G---DLDRGAVERAVKRLMVEEEGEEMRKRAISLKEQLRASVISGGSSHNSLEEFVHFMR 449 (451)
T ss_pred CeeEEeC-C---cccHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 9999997 3 79999999999999988767899999999999999999999999999999999875
|
|
| >PLN02562 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-63 Score=485.39 Aligned_cols=428 Identities=29% Similarity=0.501 Sum_probs=334.4
Q ss_pred CCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCC-----CCceEEEcCCCCCCCCCCCCCCH
Q 012645 1 MENQRERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHA-----TTVGVEPISDGFDEGGFKQAPSV 75 (459)
Q Consensus 1 m~~~~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~ 75 (459)
|++. .+.||+++|++++||++|++.||+.|+.+|++|||++++.+...+.+ +++.++.+|++++.+. ..+.
T Consensus 1 ~~~~-~~~HVVlvPfPaqGHi~PmL~LAk~Las~G~~VT~vtt~~~~~~~~~~~~~~~~i~~v~lp~g~~~~~---~~~~ 76 (448)
T PLN02562 1 MKVT-QRPKIILVPYPAQGHVTPMLKLASAFLSRGFEPVVITPEFIHRRISATLDPKLGITFMSISDGQDDDP---PRDF 76 (448)
T ss_pred CCCC-CCcEEEEEcCccccCHHHHHHHHHHHHhCCCEEEEEeCcchhhhhhhccCCCCCEEEEECCCCCCCCc---cccH
Confidence 4442 34699999999999999999999999999999999999987654443 3799999997665321 1233
Q ss_pred HHHHHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhcc----CCCC
Q 012645 76 KAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHG----LLTL 151 (459)
Q Consensus 76 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~----~~~~ 151 (459)
..+...+...+.+.+.++++++... .++++||+|.+..|+..+|+++|||++.++++++..+..+.+.... ....
T Consensus 77 ~~l~~a~~~~~~~~l~~ll~~l~~~-~pv~cvI~D~~~~w~~~vA~~~giP~~~f~~~~a~~~~~~~~~~~~~~~~~~~~ 155 (448)
T PLN02562 77 FSIENSMENTMPPQLERLLHKLDED-GEVACMVVDLLASWAIGVADRCGVPVAGFWPVMLAAYRLIQAIPELVRTGLISE 155 (448)
T ss_pred HHHHHHHHHhchHHHHHHHHHhcCC-CCcEEEEECCccHhHHHHHHHhCCCEEEEechhHHHHHHHHHHHHHhhcccccc
Confidence 3444444445677888888876432 2458999999999999999999999999999988777765544311 1111
Q ss_pred CCCCC--CCcccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhc------CC
Q 012645 152 PVNQE--TVPLTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLG------LW 223 (459)
Q Consensus 152 p~~~~--~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~------~~ 223 (459)
..... .....+|++|.+...+++.++............+.+......+++++++|||.+||+...+.... .+
T Consensus 156 ~~~~~~~~~~~~~Pg~~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~~~ 235 (448)
T PLN02562 156 TGCPRQLEKICVLPEQPLLSTEDLPWLIGTPKARKARFKFWTRTLERTKSLRWILMNSFKDEEYDDVKNHQASYNNGQNP 235 (448)
T ss_pred ccccccccccccCCCCCCCChhhCcchhcCCCcchHHHHHHHHHHhccccCCEEEEcChhhhCHHHHHHHHhhhccccCC
Confidence 00000 11125888887888888876532221223345555666667778999999999999877765532 25
Q ss_pred CeeeecccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcc-cCCHHHHHHHHHHHHhCCCcEE
Q 012645 224 PLVMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMA-DIAANQVDEIARGLKASEKPFL 302 (459)
Q Consensus 224 ~~~~vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~-~~~~~~~~~i~~a~~~~~~~~v 302 (459)
+++.|||+..... ....+...+.. +.++.+||+.++++++|||||||+. ..+.+++.+++.+++.++.+||
T Consensus 236 ~v~~iGpl~~~~~-------~~~~~~~~~~~-~~~c~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~l~~~l~~~g~~fi 307 (448)
T PLN02562 236 QILQIGPLHNQEA-------TTITKPSFWEE-DMSCLGWLQEQKPNSVIYISFGSWVSPIGESNVRTLALALEASGRPFI 307 (448)
T ss_pred CEEEecCcccccc-------cccCCCccccc-hHHHHHHHhcCCCCceEEEEecccccCCCHHHHHHHHHHHHHCCCCEE
Confidence 6999999975410 00001111122 3457799999988899999999986 5788999999999999999999
Q ss_pred EEEeCCC-CCCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHH
Q 012645 303 WVVKENE-NKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEE 381 (459)
Q Consensus 303 ~~~~~~~-~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~ 381 (459)
|++.... +.+|++|.++.++|+++++|+||.+||+|+++++||||||+||++||+++|||||++|+++||+.||+++++
T Consensus 308 W~~~~~~~~~l~~~~~~~~~~~~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~ 387 (448)
T PLN02562 308 WVLNPVWREGLPPGYVERVSKQGKVVSWAPQLEVLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVD 387 (448)
T ss_pred EEEcCCchhhCCHHHHHHhccCEEEEecCCHHHHhCCCccceEEecCcchhHHHHHHcCCCEEeCCcccchHHHHHHHHH
Confidence 9997543 468889988999999999999999999999999999999999999999999999999999999999999987
Q ss_pred hhhceEEeeecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Q 012645 382 VWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRL 450 (459)
Q Consensus 382 ~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l 450 (459)
.||+|+.+. ..+.++|.++|+++|.|+ +|++||+++++++.++ .+||||.+++++|++++
T Consensus 388 ~~g~g~~~~-----~~~~~~l~~~v~~~l~~~---~~r~~a~~l~~~~~~~-~~gGSS~~nl~~~v~~~ 447 (448)
T PLN02562 388 VWKIGVRIS-----GFGQKEVEEGLRKVMEDS---GMGERLMKLRERAMGE-EARLRSMMNFTTLKDEL 447 (448)
T ss_pred HhCceeEeC-----CCCHHHHHHHHHHHhCCH---HHHHHHHHHHHHHHhc-CCCCCHHHHHHHHHHHh
Confidence 559997774 689999999999999988 9999999999999887 66799999999999986
|
|
| >PLN02210 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-63 Score=484.68 Aligned_cols=437 Identities=34% Similarity=0.611 Sum_probs=335.1
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHH--HHhCCCeEEEEecCccccccCC-----CCceEEEcCCCCCCCCCCCCCCHHH
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKR--LASKRVKATLATTHYTVKSIHA-----TTVGVEPISDGFDEGGFKQAPSVKA 77 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~--L~~~Gh~V~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~ 77 (459)
..+.||+++|+++.||++|++.||+. |+++|++|||++++.+.+.++. .++++..+|++++++.. .+...
T Consensus 6 ~~~~hvv~~P~pa~GHi~P~l~La~~L~L~~~G~~VT~v~t~~~~~~~~~~~~~~~~~~~~~~~~glp~~~~---~~~~~ 82 (456)
T PLN02210 6 GQETHVLMVTLAFQGHINPMLKLAKHLSLSSKNLHFTLATTEQARDLLSTVEKPRRPVDLVFFSDGLPKDDP---RAPET 82 (456)
T ss_pred CCCCEEEEeCCcccccHHHHHHHHHHHHhhcCCcEEEEEeccchhhhhccccCCCCceEEEECCCCCCCCcc---cCHHH
Confidence 34579999999999999999999999 5699999999999987766543 25777777776665431 23334
Q ss_pred HHHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCC-
Q 012645 78 YLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQE- 156 (459)
Q Consensus 78 ~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~- 156 (459)
++..+.+.+.+.+.+++++. ++|+||+|.++.|+..+|+++|||++.+++.++..+....+........+....
T Consensus 83 ~~~~~~~~~~~~l~~~l~~~-----~~~~vI~D~~~~w~~~vA~~lgIP~~~f~~~sa~~~~~~~~~~~~~~~~~~~~~~ 157 (456)
T PLN02210 83 LLKSLNKVGAKNLSKIIEEK-----RYSCIISSPFTPWVPAVAAAHNIPCAILWIQACGAYSVYYRYYMKTNSFPDLEDL 157 (456)
T ss_pred HHHHHHHhhhHHHHHHHhcC-----CCcEEEECCcchhHHHHHHHhCCCEEEEecccHHHHHHHHhhhhccCCCCccccc
Confidence 45545444455566666542 799999999999999999999999999999888877776654322212221110
Q ss_pred CCcccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcCCCeeeecccCCCcc
Q 012645 157 TVPLTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAY 236 (459)
Q Consensus 157 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vgp~~~~~~ 236 (459)
...+.+|++|.+...+++..+..... ........+.......++++++|||.++|+...+.+...+++++|||+++...
T Consensus 158 ~~~~~~Pgl~~~~~~dl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~v~~VGPl~~~~~ 236 (456)
T PLN02210 158 NQTVELPALPLLEVRDLPSFMLPSGG-AHFNNLMAEFADCLRYVKWVLVNSFYELESEIIESMADLKPVIPIGPLVSPFL 236 (456)
T ss_pred CCeeeCCCCCCCChhhCChhhhcCCc-hHHHHHHHHHHHhcccCCEEEEeCHHHHhHHHHHHHhhcCCEEEEcccCchhh
Confidence 12345888887788888765543211 11222333333445667899999999999988888766557999999975311
Q ss_pred cc-ccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCC-CCCch
Q 012645 237 LD-QQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENE-NKLPV 314 (459)
Q Consensus 237 ~~-~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~-~~~~~ 314 (459)
.. .........+...|. .++++.+||+.++++++|||||||......+++++++.+++.++.+|||+++... ...+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~-~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~e~a~~l~~~~~~flw~~~~~~~~~~~~ 315 (456)
T PLN02210 237 LGDDEEETLDGKNLDMCK-SDDCCMEWLDKQARSSVVYISFGSMLESLENQVETIAKALKNRGVPFLWVIRPKEKAQNVQ 315 (456)
T ss_pred cCcccccccccccccccc-cchHHHHHHhCCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEeCCccccchh
Confidence 00 000000011111233 3566899999998889999999999988999999999999999999999997532 22344
Q ss_pred hhhhhc-CCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecC
Q 012645 315 EFVNSV-GETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNR 393 (459)
Q Consensus 315 ~~~~~~-~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~ 393 (459)
.+.++. ++++++++|+||.+||+|+++++|||||||||++||+++|||||++|++.||+.||+++++.||+|+.+....
T Consensus 316 ~~~~~~~~~~g~v~~w~PQ~~iL~h~~vg~FitH~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~ 395 (456)
T PLN02210 316 VLQEMVKEGQGVVLEWSPQEKILSHMAISCFVTHCGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDA 395 (456)
T ss_pred hHHhhccCCCeEEEecCCHHHHhcCcCcCeEEeeCCcccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccc
Confidence 566565 4888889999999999999999999999999999999999999999999999999999998339999986431
Q ss_pred -CCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012645 394 -AGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLL 451 (459)
Q Consensus 394 -~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~ 451 (459)
.+.++.++|.++|+++|.+++++++|+||+++++.+++++++||||..++++|++++.
T Consensus 396 ~~~~~~~~~l~~av~~~m~~~~g~~~r~~a~~l~~~a~~Av~~gGSS~~~l~~~v~~~~ 454 (456)
T PLN02210 396 VDGELKVEEVERCIEAVTEGPAAADIRRRAAELKHVARLALAPGGSSARNLDLFISDIT 454 (456)
T ss_pred cCCcCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHh
Confidence 1268999999999999998777789999999999999999999999999999999985
|
|
| >PLN02152 indole-3-acetate beta-glucosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-62 Score=478.07 Aligned_cols=432 Identities=39% Similarity=0.721 Sum_probs=337.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHh-CCCeEEEEecCcc-cc-ccC---C-CCceEEEcCCCCCCCCCCCCCCHHH
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLAS-KRVKATLATTHYT-VK-SIH---A-TTVGVEPISDGFDEGGFKQAPSVKA 77 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~-~Gh~V~~~~~~~~-~~-~~~---~-~g~~~~~~~~~~~~~~~~~~~~~~~ 77 (459)
|.+.||+++|+++.||++|++.||+.|+. +|+.|||++++.+ .. .+. . +++.|+.++++++.+......+...
T Consensus 1 ~~~~hvv~~P~p~qGHi~P~l~La~~La~~~G~~vT~v~t~~~~~~~~~~~~~~~~~i~~~~i~dglp~g~~~~~~~~~~ 80 (455)
T PLN02152 1 MAPPHFLLVTFPAQGHVNPSLRFARRLIKTTGTRVTFATCLSVIHRSMIPNHNNVENLSFLTFSDGFDDGVISNTDDVQN 80 (455)
T ss_pred CCCcEEEEecCcccccHHHHHHHHHHHhhCCCcEEEEEeccchhhhhhhccCCCCCCEEEEEcCCCCCCccccccccHHH
Confidence 45679999999999999999999999996 7999999999853 21 121 1 3699999998776643222234445
Q ss_pred HHHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCC
Q 012645 78 YLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQET 157 (459)
Q Consensus 78 ~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 157 (459)
++......+.+.+.++++++.....++++||+|.+..|+..+|+++|||++.+++++++.++.+++...+..
T Consensus 81 ~~~~~~~~~~~~l~~~l~~l~~~~~pv~ciV~D~~~~wa~dvA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~-------- 152 (455)
T PLN02152 81 RLVNFERNGDKALSDFIEANLNGDSPVTCLIYTILPNWAPKVARRFHLPSVLLWIQPAFVFDIYYNYSTGNN-------- 152 (455)
T ss_pred HHHHHHHhccHHHHHHHHHhhccCCCceEEEECCccHhHHHHHHHhCCCEEEEECccHHHHHHHHHhhccCC--------
Confidence 555566667788888888764322356999999999999999999999999999999988887776543211
Q ss_pred CcccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccC--CceEEEcchhHhhHHHHHHHhcCCCeeeecccCCCc
Q 012645 158 VPLTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNK--NDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSA 235 (459)
Q Consensus 158 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~vgp~~~~~ 235 (459)
..+.+|++|.+..++++.++............+.+......+ ++++++|||++||+...+.+.. .+++.|||+.+..
T Consensus 153 ~~~~iPglp~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~-~~v~~VGPL~~~~ 231 (455)
T PLN02152 153 SVFEFPNLPSLEIRDLPSFLSPSNTNKAAQAVYQELMEFLKEESNPKILVNTFDSLEPEFLTAIPN-IEMVAVGPLLPAE 231 (455)
T ss_pred CeeecCCCCCCchHHCchhhcCCCCchhHHHHHHHHHHHhhhccCCEEEEeChHHhhHHHHHhhhc-CCEEEEcccCccc
Confidence 123489988888888888664322222233344444443332 4699999999999998888865 3699999997542
Q ss_pred cccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCC------
Q 012645 236 YLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENE------ 309 (459)
Q Consensus 236 ~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~------ 309 (459)
..... ....+... .+.+.++.+||+.++++++|||||||+...+.+++.+++.+++.++.+|||++....
T Consensus 232 ~~~~~---~~~~~~~~-~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flWv~r~~~~~~~~~ 307 (455)
T PLN02152 232 IFTGS---ESGKDLSV-RDQSSSYTLWLDSKTESSVIYVSFGTMVELSKKQIEELARALIEGKRPFLWVITDKLNREAKI 307 (455)
T ss_pred ccccc---ccCccccc-cccchHHHHHhhCCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCeEEEEecCccccccc
Confidence 10000 00000011 122457999999998889999999999999999999999999999999999997521
Q ss_pred ---C----CCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHh
Q 012645 310 ---N----KLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEV 382 (459)
Q Consensus 310 ---~----~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~ 382 (459)
. .++++|.++.++|+++++|+||.+||+|+++++||||||+||++||+++|||||++|++.||+.||+++++.
T Consensus 308 ~~~~~~~~~~~~~f~e~~~~~g~v~~W~PQ~~iL~h~~vg~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~ 387 (455)
T PLN02152 308 EGEEETEIEKIAGFRHELEEVGMIVSWCSQIEVLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEI 387 (455)
T ss_pred ccccccccccchhHHHhccCCeEEEeeCCHHHHhCCcccceEEeeCCcccHHHHHHcCCCEEeccccccchHHHHHHHHH
Confidence 0 236788888999999999999999999999999999999999999999999999999999999999999996
Q ss_pred hhceEEeeecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Q 012645 383 WEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRL 450 (459)
Q Consensus 383 ~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l 450 (459)
||+|..+.....+..+.++|.++|+++|+|+ +.+||+||+++++.++++..+||||..++++|++++
T Consensus 388 ~~~G~~~~~~~~~~~~~e~l~~av~~vm~~~-~~~~r~~a~~~~~~~~~a~~~ggsS~~nl~~li~~i 454 (455)
T PLN02152 388 WKTGVRVRENSEGLVERGEIRRCLEAVMEEK-SVELRESAEKWKRLAIEAGGEGGSSDKNVEAFVKTL 454 (455)
T ss_pred hCceEEeecCcCCcCcHHHHHHHHHHHHhhh-HHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHh
Confidence 6778777532212469999999999999754 447999999999999999999999999999999986
|
|
| >PLN02207 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-62 Score=476.90 Aligned_cols=434 Identities=25% Similarity=0.429 Sum_probs=331.5
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCC--CeEEEEecCcccc-----ccC-----CCCceEEEcCCCCCCCCCCCC
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKR--VKATLATTHYTVK-----SIH-----ATTVGVEPISDGFDEGGFKQA 72 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~G--h~V~~~~~~~~~~-----~~~-----~~g~~~~~~~~~~~~~~~~~~ 72 (459)
|++.||+++|+++.||++|++.||+.|+.+| ..|||++++.... .+. .+++.|+.+|+..........
T Consensus 1 ~~~~hvv~~P~p~qGHi~P~l~lA~~La~~gg~~~vT~~~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~~~~ 80 (468)
T PLN02207 1 MRNAELIFIPTPTVGHLVPFLEFARRLIEQDDRIRITILLMKLQGQSHLDTYVKSIASSQPFVRFIDVPELEEKPTLGGT 80 (468)
T ss_pred CCCcEEEEeCCcchhhHHHHHHHHHHHHhCCCCeEEEEEEcCCCcchhhHHhhhhccCCCCCeEEEEeCCCCCCCccccc
Confidence 5678999999999999999999999999998 9999999986541 111 136999999854321110112
Q ss_pred CCHHHHHHHHHHhc----hHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhccC
Q 012645 73 PSVKAYLESFKTVG----SRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGL 148 (459)
Q Consensus 73 ~~~~~~~~~~~~~~----~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 148 (459)
.+....+....... .+.+.+++++......++++||+|.++.|+..+|+++|||++.++++++..++.+.+.+...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pv~cvV~D~~~~w~~~vA~~~gip~~~f~~~~a~~~~~~~~~~~~~ 160 (468)
T PLN02207 81 QSVEAYVYDVIEKNIPLVRNIVMDILSSLALDGVKVKGFVADFFCLPMIDVAKDVSLPFYVFLTTNSGFLAMMQYLADRH 160 (468)
T ss_pred cCHHHHHHHHHHhcchhHHHHHHHHHHHhccCCCCeEEEEECCcchHHHHHHHHhCCCEEEEECccHHHHHHHHHhhhcc
Confidence 23443333333333 33445555443211123499999999999999999999999999999988777766654322
Q ss_pred CCC---CCCCCCCcccCCCC-CCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhc---
Q 012645 149 LTL---PVNQETVPLTLPGL-PSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLG--- 221 (459)
Q Consensus 149 ~~~---p~~~~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--- 221 (459)
.+. +....+..+.+|++ |++...+++.++..... ...+.+......+++++++||++++|++..+.+..
T Consensus 161 ~~~~~~~~~~~~~~~~vPgl~~~l~~~dlp~~~~~~~~----~~~~~~~~~~~~~~~~vlvNtf~~LE~~~~~~~~~~~~ 236 (468)
T PLN02207 161 SKDTSVFVRNSEEMLSIPGFVNPVPANVLPSALFVEDG----YDAYVKLAILFTKANGILVNSSFDIEPYSVNHFLDEQN 236 (468)
T ss_pred ccccccCcCCCCCeEECCCCCCCCChHHCcchhcCCcc----HHHHHHHHHhcccCCEEEEEchHHHhHHHHHHHHhccC
Confidence 211 10011123568998 57888888876642221 22333444456778999999999999988777743
Q ss_pred CCCeeeecccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcE
Q 012645 222 LWPLVMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPF 301 (459)
Q Consensus 222 ~~~~~~vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~ 301 (459)
.++++.|||+..... .+.+ .... ..++++.+||+.++++++|||||||....+.+++++++.+++.++++|
T Consensus 237 ~p~v~~VGPl~~~~~--~~~~-----~~~~--~~~~~~~~WLd~~~~~sVVyvSfGS~~~~~~~q~~ela~~l~~~~~~f 307 (468)
T PLN02207 237 YPSVYAVGPIFDLKA--QPHP-----EQDL--ARRDELMKWLDDQPEASVVFLCFGSMGRLRGPLVKEIAHGLELCQYRF 307 (468)
T ss_pred CCcEEEecCCccccc--CCCC-----cccc--chhhHHHHHHhcCCCCcEEEEEeccCcCCCHHHHHHHHHHHHHCCCcE
Confidence 357999999975410 0000 0001 123569999999988899999999999999999999999999999999
Q ss_pred EEEEeCCC----CCCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHH
Q 012645 302 LWVVKENE----NKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAK 377 (459)
Q Consensus 302 v~~~~~~~----~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~ 377 (459)
||++.... +.+|++|.++.++|+.+++|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+
T Consensus 308 lW~~r~~~~~~~~~lp~~f~er~~~~g~i~~W~PQ~~IL~H~~vg~FvTH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~ 387 (468)
T PLN02207 308 LWSLRTEEVTNDDLLPEGFLDRVSGRGMICGWSPQVEILAHKAVGGFVSHCGWNSIVESLWFGVPIVTWPMYAEQQLNAF 387 (468)
T ss_pred EEEEeCCCccccccCCHHHHhhcCCCeEEEEeCCHHHHhcccccceeeecCccccHHHHHHcCCCEEecCccccchhhHH
Confidence 99998532 45889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhceEEeeec----CCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Q 012645 378 FVEEVWEVGVRAKKN----RAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLLK 452 (459)
Q Consensus 378 rv~~~~G~G~~~~~~----~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~~ 452 (459)
++++.||+|+.+... ..+.++.++|.++|+++|.+ ++++||+||+++++.+++++.+||||..++++|++++..
T Consensus 388 ~~~~~~gvGv~~~~~~~~~~~~~v~~e~i~~av~~vm~~-~~~~~r~~a~~l~~~a~~A~~~GGSS~~~l~~~v~~~~~ 465 (468)
T PLN02207 388 LMVKELKLAVELKLDYRVHSDEIVNANEIETAIRCVMNK-DNNVVRKRVMDISQMIQRATKNGGSSFAAIEKFIHDVIG 465 (468)
T ss_pred HHHHHhCceEEEecccccccCCcccHHHHHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Confidence 988844999877421 01146999999999999973 245999999999999999999999999999999999875
|
|
| >PLN02554 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-62 Score=485.35 Aligned_cols=427 Identities=28% Similarity=0.483 Sum_probs=329.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCC--CeEEEEecCccccc-------c---C---CCCceEEEcCCCCCCCCCCC
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASKR--VKATLATTHYTVKS-------I---H---ATTVGVEPISDGFDEGGFKQ 71 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~G--h~V~~~~~~~~~~~-------~---~---~~g~~~~~~~~~~~~~~~~~ 71 (459)
|+||+++|+++.||++|++.||+.|+.+| ..|||++++.+... + . .++++++.+|++.+... .
T Consensus 2 ~~hvvl~P~paqGHi~P~l~LAk~La~~G~~~~vT~v~t~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~-~- 79 (481)
T PLN02554 2 KIELVFIPSPGIGHLRPTVELAKLLVDSDDRLSITVIIIPSRSGDDASSSAYIASLSASSEDRLRYEVISAGDQPTT-E- 79 (481)
T ss_pred ceEEEEeCCcchhhHHHHHHHHHHHHhCCCCEEEEEEeCCCccchhhhhhhhhhhcccCCCCCeEEEEcCCCCCCcc-c-
Confidence 68999999999999999999999999998 88999999866331 1 1 23689999986643211 1
Q ss_pred CCCHHHHHHHHHHhchHHHHHHHHHhhcCC-CCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCC
Q 012645 72 APSVKAYLESFKTVGSRTLAEVILKYKDSE-SPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLT 150 (459)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 150 (459)
.......+..+...+.+.+++++++..... .+.++||+|.++.|+..+|+++|||++.+++++++.++.+.+.+.....
T Consensus 80 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~pv~cvV~D~f~~wa~dvA~~lgIP~~~F~t~sa~~~~~~~~~~~~~~~ 159 (481)
T PLN02554 80 DPTFQSYIDNQKPKVRDAVAKLVDDSSTPSSPRLAGFVVDMFCTSMIDVANEFGVPSYMFYTSNATFLGLQLHVQMLYDE 159 (481)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEECCcchhHHHHHHHhCCCEEEEeCCcHHHHHHHHhhhhhccc
Confidence 112222333333333444444443321111 1248999999999999999999999999999999988887776532211
Q ss_pred --CC---CCCCCCcccCCCCC-CCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhc---
Q 012645 151 --LP---VNQETVPLTLPGLP-SLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLG--- 221 (459)
Q Consensus 151 --~p---~~~~~~~~~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--- 221 (459)
.+ ......++.+|+++ +++..+++..... ..+...+.+......+++++++|++.++|+.....+.+
T Consensus 160 ~~~~~~~~~~~~~~v~iPgl~~pl~~~dlp~~~~~----~~~~~~~~~~~~~~~~~~gvlvNt~~eLe~~~~~~l~~~~~ 235 (481)
T PLN02554 160 KKYDVSELEDSEVELDVPSLTRPYPVKCLPSVLLS----KEWLPLFLAQARRFREMKGILVNTVAELEPQALKFFSGSSG 235 (481)
T ss_pred cccCccccCCCCceeECCCCCCCCCHHHCCCcccC----HHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHHhccc
Confidence 11 01111235689884 6777777765432 12334455556667789999999999999988888864
Q ss_pred -CCCeeeecccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCc
Q 012645 222 -LWPLVMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKP 300 (459)
Q Consensus 222 -~~~~~~vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~ 300 (459)
.++++.|||++.... .. . + . ....++++.+||+.++++++|||||||+...+.+++.+++.+++.++++
T Consensus 236 ~~~~v~~vGpl~~~~~----~~-~---~-~-~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~la~~l~~~~~~ 305 (481)
T PLN02554 236 DLPPVYPVGPVLHLEN----SG-D---D-S-KDEKQSEILRWLDEQPPKSVVFLCFGSMGGFSEEQAREIAIALERSGHR 305 (481)
T ss_pred CCCCEEEeCCCccccc----cc-c---c-c-ccccchHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHHcCCC
Confidence 357999999943210 00 0 0 0 0124567999999998889999999999888999999999999999999
Q ss_pred EEEEEeCCC---------------CCCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeec
Q 012645 301 FLWVVKENE---------------NKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVA 365 (459)
Q Consensus 301 ~v~~~~~~~---------------~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li 365 (459)
|||+++... ..+|++|.++.++|+++++|+||.+||+|+++++||||||+||++||+++|||||+
T Consensus 306 flW~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~r~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Ea~~~GVP~l~ 385 (481)
T PLN02554 306 FLWSLRRASPNIMKEPPGEFTNLEEILPEGFLDRTKDIGKVIGWAPQVAVLAKPAIGGFVTHCGWNSILESLWFGVPMAA 385 (481)
T ss_pred eEEEEcCCcccccccccccccchhhhCChHHHHHhccCceEEeeCCHHHHhCCcccCcccccCccchHHHHHHcCCCEEe
Confidence 999997520 23588999899999999999999999999999999999999999999999999999
Q ss_pred cccccchhhHHH-HHHHhhhceEEeeec--------CCCcccHHHHHHHHHHHhc-ChhhHHHHHHHHHHHHHHHHHHhc
Q 012645 366 VPQFSDQPTNAK-FVEEVWEVGVRAKKN--------RAGIVTGEELNKCVNEVMD-GERSQKIKRNVSKWREFAKKAVSA 435 (459)
Q Consensus 366 ~P~~~DQ~~na~-rv~~~~G~G~~~~~~--------~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~a~~l~~~~~~~~~~ 435 (459)
+|+++||+.||+ +++++ |+|+.+... ..+.++.++|.++|+++|. |+ +||+||+++++.+++++.+
T Consensus 386 ~P~~~DQ~~Na~~~v~~~-g~Gv~l~~~~~~~~~~~~~~~~~~e~l~~av~~vm~~~~---~~r~~a~~l~~~~~~av~~ 461 (481)
T PLN02554 386 WPLYAEQKFNAFEMVEEL-GLAVEIRKYWRGDLLAGEMETVTAEEIERGIRCLMEQDS---DVRKRVKEMSEKCHVALMD 461 (481)
T ss_pred cCccccchhhHHHHHHHh-CceEEeeccccccccccccCeEcHHHHHHHHHHHhcCCH---HHHHHHHHHHHHHHHHhcC
Confidence 999999999995 57777 999998631 0126899999999999997 55 9999999999999999999
Q ss_pred CCCcHHHHHHHHHHHHHh
Q 012645 436 GGSSDKNIDEFVVRLLKA 453 (459)
Q Consensus 436 ~g~s~~~~~~~~~~l~~~ 453 (459)
||||..++++|++++.++
T Consensus 462 gGss~~~l~~lv~~~~~~ 479 (481)
T PLN02554 462 GGSSHTALKKFIQDVTKN 479 (481)
T ss_pred CChHHHHHHHHHHHHHhh
Confidence 999999999999999875
|
|
| >PLN02992 coniferyl-alcohol glucosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-61 Score=473.83 Aligned_cols=421 Identities=27% Similarity=0.454 Sum_probs=329.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHH-hCCCeEEEEecCcccccc-----CCCCceEEEcCC----CCCCCCCCCCCCH
Q 012645 6 ERVHVLVLTYPAQGHINPLLQFAKRLA-SKRVKATLATTHYTVKSI-----HATTVGVEPISD----GFDEGGFKQAPSV 75 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p~~~la~~L~-~~Gh~V~~~~~~~~~~~~-----~~~g~~~~~~~~----~~~~~~~~~~~~~ 75 (459)
.+.||+++|++++||++|++.||+.|+ ++|+.|||++++.+...+ ...++.++.+|. ++++. . .+.
T Consensus 4 ~~pHVvl~P~paqGHi~P~l~LAk~La~~~g~~vT~v~t~~n~~~~~~~~~~~~~i~~~~lp~p~~~glp~~---~-~~~ 79 (481)
T PLN02992 4 TKPHAAMFSSPGMGHVIPVIELGKRLSANHGFHVTVFVLETDAASAQSKFLNSTGVDIVGLPSPDISGLVDP---S-AHV 79 (481)
T ss_pred CCcEEEEeCCcccchHHHHHHHHHHHHhCCCcEEEEEeCCCchhhhhhccccCCCceEEECCCccccCCCCC---C-ccH
Confidence 467999999999999999999999998 799999999999775433 123688998884 22211 1 122
Q ss_pred HHHHHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCC-
Q 012645 76 KAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVN- 154 (459)
Q Consensus 76 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~- 154 (459)
...+......+.+.++++++++. .+|++||+|.++.|+..+|+++|||++.+++++++.++...+.+....+....
T Consensus 80 ~~~~~~~~~~~~~~~~~~l~~~~---~~p~cvV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~~~~~~~~ 156 (481)
T PLN02992 80 VTKIGVIMREAVPTLRSKIAEMH---QKPTALIVDLFGTDALCLGGEFNMLTYIFIASNARFLGVSIYYPTLDKDIKEEH 156 (481)
T ss_pred HHHHHHHHHHhHHHHHHHHHhcC---CCCeEEEECCcchhHHHHHHHcCCCEEEEecCcHHHHHHHHhhhhhcccccccc
Confidence 22333333445567777776642 36899999999999999999999999999999988776655443211111100
Q ss_pred -CCCCcccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcC--------CCe
Q 012645 155 -QETVPLTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGL--------WPL 225 (459)
Q Consensus 155 -~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--------~~~ 225 (459)
....++.+|++|+++..+++..+.... ......+.+......+++++++|||.+||+...+.+.+. +++
T Consensus 157 ~~~~~~~~iPg~~~l~~~dlp~~~~~~~--~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~l~~l~~~~~~~~~~~~~v 234 (481)
T PLN02992 157 TVQRKPLAMPGCEPVRFEDTLDAYLVPD--EPVYRDFVRHGLAYPKADGILVNTWEEMEPKSLKSLQDPKLLGRVARVPV 234 (481)
T ss_pred ccCCCCcccCCCCccCHHHhhHhhcCCC--cHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHhhccccccccCCce
Confidence 001234589988788778875332211 123344445555667789999999999999988887531 469
Q ss_pred eeecccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEE
Q 012645 226 VMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVV 305 (459)
Q Consensus 226 ~~vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~ 305 (459)
+.|||+++.. . ....++++.+||+.++++++|||||||....+.+++.+++.+++.++.+|||++
T Consensus 235 ~~VGPl~~~~---~------------~~~~~~~c~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flW~~ 299 (481)
T PLN02992 235 YPIGPLCRPI---Q------------SSKTDHPVLDWLNKQPNESVLYISFGSGGSLSAKQLTELAWGLEMSQQRFVWVV 299 (481)
T ss_pred EEecCccCCc---C------------CCcchHHHHHHHHcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 9999997541 0 011245689999999889999999999999999999999999999999999999
Q ss_pred eCC------------------C---CCCchhhhhhcCCCce-EEeeecHHHHhcccCccceeccCchhhHHHhhhcCCee
Q 012645 306 KEN------------------E---NKLPVEFVNSVGETGL-VVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAV 363 (459)
Q Consensus 306 ~~~------------------~---~~~~~~~~~~~~~~v~-v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~ 363 (459)
... + ..+|++|.+++.++.. +.+|+||.+||+|+++++||||||+||++||+++||||
T Consensus 300 r~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~f~eR~~~rg~vv~~W~PQ~~iL~h~~vg~FitH~G~nS~~Eal~~GVP~ 379 (481)
T PLN02992 300 RPPVDGSACSAYFSANGGETRDNTPEYLPEGFVSRTHDRGFVVPSWAPQAEILAHQAVGGFLTHCGWSSTLESVVGGVPM 379 (481)
T ss_pred eCCcccccccccccCcccccccchhhhCCHHHHHHhcCCCEEEeecCCHHHHhCCcccCeeEecCchhHHHHHHHcCCCE
Confidence 521 0 2478889888876654 45999999999999999999999999999999999999
Q ss_pred eccccccchhhHHHHHH-HhhhceEEeeecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHh--cCCCcH
Q 012645 364 VAVPQFSDQPTNAKFVE-EVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVS--AGGSSD 440 (459)
Q Consensus 364 li~P~~~DQ~~na~rv~-~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~--~~g~s~ 440 (459)
|++|++.||+.||++++ ++ |+|+.++.. ++.++.++|.++|+++|.+++++.++++++++++.+++++. +||||.
T Consensus 380 l~~P~~~DQ~~na~~~~~~~-g~gv~~~~~-~~~~~~~~l~~av~~vm~~~~g~~~r~~a~~~~~~a~~Av~~~~GGSS~ 457 (481)
T PLN02992 380 IAWPLFAEQNMNAALLSDEL-GIAVRSDDP-KEVISRSKIEALVRKVMVEEEGEEMRRKVKKLRDTAEMSLSIDGGGVAH 457 (481)
T ss_pred EecCccchhHHHHHHHHHHh-CeeEEecCC-CCcccHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCCCchH
Confidence 99999999999999995 77 999999752 11589999999999999887778999999999999999994 599999
Q ss_pred HHHHHHHHHHHH
Q 012645 441 KNIDEFVVRLLK 452 (459)
Q Consensus 441 ~~~~~~~~~l~~ 452 (459)
..+++|++++.+
T Consensus 458 ~~l~~~v~~~~~ 469 (481)
T PLN02992 458 ESLCRVTKECQR 469 (481)
T ss_pred HHHHHHHHHHHH
Confidence 999999999865
|
|
| >PLN02448 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-61 Score=478.31 Aligned_cols=434 Identities=34% Similarity=0.582 Sum_probs=337.1
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEecCccccccCC----CCceEEEcCCCCCCCCCCCCCCHHH
Q 012645 4 QRERVHVLVLTYPAQGHINPLLQFAKRLASK--RVKATLATTHYTVKSIHA----TTVGVEPISDGFDEGGFKQAPSVKA 77 (459)
Q Consensus 4 ~~~~~kil~~~~~~~GH~~p~~~la~~L~~~--Gh~V~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~ 77 (459)
+..+.||+++|+|+.||++|++.||++|+++ ||+|||++++.+...++. .|++|+.+|++++... ....+...
T Consensus 7 ~~~~~hVvlvp~pa~GHi~P~l~LA~~L~~~~~G~~VT~~~t~~~~~~i~~~~~~~gi~fv~lp~~~p~~~-~~~~~~~~ 85 (459)
T PLN02448 7 PTTSCHVVAMPYPGRGHINPMMNLCKLLASRKPDILITFVVTEEWLGLIGSDPKPDNIRFATIPNVIPSEL-VRAADFPG 85 (459)
T ss_pred CCCCcEEEEECCcccccHHHHHHHHHHHHcCCCCcEEEEEeCCchHhHhhccCCCCCEEEEECCCCCCCcc-ccccCHHH
Confidence 3567899999999999999999999999999 999999999998777666 3899999997555432 11234445
Q ss_pred HHHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCC--CCCCCC
Q 012645 78 YLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLL--TLPVNQ 155 (459)
Q Consensus 78 ~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~--~~p~~~ 155 (459)
++..+.+.+.+.++++++++. .++|+||+|.++.|+..+|+++|||++.++++++..++.+.+...... ..+...
T Consensus 86 ~~~~~~~~~~~~~~~~l~~~~---~~~~~VI~D~~~~wa~~vA~~lgIP~v~f~~~~a~~~~~~~~~~~~~~~~~~~~~~ 162 (459)
T PLN02448 86 FLEAVMTKMEAPFEQLLDRLE---PPVTAIVADTYLFWAVGVGNRRNIPVASLWTMSATFFSVFYHFDLLPQNGHFPVEL 162 (459)
T ss_pred HHHHHHHHhHHHHHHHHHhcC---CCcEEEEECCccHHHHHHHHHhCCCeEEEEhHHHHHHHHHHHhhhhhhccCCCCcc
Confidence 555555456667777777653 368999999999999999999999999999999876666555431110 011110
Q ss_pred ---CCC-cccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcC--CCeeeec
Q 012645 156 ---ETV-PLTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGL--WPLVMIG 229 (459)
Q Consensus 156 ---~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~vg 229 (459)
... ...+|+++.+...+++.+.... .....+.+.+......+++++++||+++||+...+.+.+. ++++.||
T Consensus 163 ~~~~~~~~~~iPg~~~l~~~dlp~~~~~~--~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~~~~iG 240 (459)
T PLN02448 163 SESGEERVDYIPGLSSTRLSDLPPIFHGN--SRRVLKRILEAFSWVPKAQYLLFTSFYELEAQAIDALKSKFPFPVYPIG 240 (459)
T ss_pred ccccCCccccCCCCCCCChHHCchhhcCC--chHHHHHHHHHHhhcccCCEEEEccHHHhhHHHHHHHHhhcCCceEEec
Confidence 001 1137887777777777655422 1223344455555566778999999999999888888654 3699999
Q ss_pred ccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCC
Q 012645 230 PLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENE 309 (459)
Q Consensus 230 p~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~ 309 (459)
|+.+...... .. .+.. ....+.++.+|++.++++++|||||||+.....+++++++++++..+.+|||++...
T Consensus 241 P~~~~~~~~~----~~-~~~~-~~~~~~~~~~wl~~~~~~~vvyvsfGs~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~- 313 (459)
T PLN02448 241 PSIPYMELKD----NS-SSSN-NEDNEPDYFQWLDSQPEGSVLYVSLGSFLSVSSAQMDEIAAGLRDSGVRFLWVARGE- 313 (459)
T ss_pred CcccccccCC----Cc-cccc-cccchhHHHHHHcCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCEEEEEcCc-
Confidence 9976421000 00 0000 011234689999999889999999999988888999999999999999999987532
Q ss_pred CCCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEe
Q 012645 310 NKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRA 389 (459)
Q Consensus 310 ~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~ 389 (459)
..++.++.++|+++++|+||.+||+|+++++||||||+||++||+++|||||++|++.||+.||+++++.||+|..+
T Consensus 314 ---~~~~~~~~~~~~~v~~w~pQ~~iL~h~~v~~fvtHgG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~ 390 (459)
T PLN02448 314 ---ASRLKEICGDMGLVVPWCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRV 390 (459)
T ss_pred ---hhhHhHhccCCEEEeccCCHHHHhccCccceEEecCchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEE
Confidence 22455556678999999999999999999999999999999999999999999999999999999999866999888
Q ss_pred eecC--CCcccHHHHHHHHHHHhcCh--hhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Q 012645 390 KKNR--AGIVTGEELNKCVNEVMDGE--RSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLLKA 453 (459)
Q Consensus 390 ~~~~--~~~~~~~~l~~~i~~ll~~~--~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~~~ 453 (459)
.... .+..++++|+++++++|.++ ++++||+||+++++.+++++.+||||..++++|++++.+.
T Consensus 391 ~~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~r~~a~~~~~~~~~a~~~gGss~~~l~~~v~~~~~~ 458 (459)
T PLN02448 391 KREVGEETLVGREEIAELVKRFMDLESEEGKEMRRRAKELQEICRGAIAKGGSSDTNLDAFIRDISQG 458 (459)
T ss_pred ecccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcc
Confidence 6321 12579999999999999863 5779999999999999999999999999999999999753
|
|
| >PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-61 Score=475.58 Aligned_cols=438 Identities=26% Similarity=0.403 Sum_probs=328.4
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCC-----CCceEEEcC----CCCCCCCCCCCC--
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHA-----TTVGVEPIS----DGFDEGGFKQAP-- 73 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~-----~g~~~~~~~----~~~~~~~~~~~~-- 73 (459)
..++||+++|++++||++|++.||+.|+.+|+.|||++++.+...++. +++.++.+| ++++++......
T Consensus 7 ~~~~HVvl~PfpaqGHi~P~l~LAk~La~~G~~VTfv~T~~n~~~~~~~~~~~~~i~~~~lp~P~~~~lPdG~~~~~~~~ 86 (477)
T PLN02863 7 PAGTHVLVFPFPAQGHMIPLLDLTHRLALRGLTITVLVTPKNLPFLNPLLSKHPSIETLVLPFPSHPSIPSGVENVKDLP 86 (477)
T ss_pred CCCCEEEEecCcccchHHHHHHHHHHHHhCCCEEEEEeCCCcHHHHhhhcccCCCeeEEeCCCCCcCCCCCCCcChhhcc
Confidence 356899999999999999999999999999999999999987655433 357777654 133333211111
Q ss_pred -CHHHHHHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCC
Q 012645 74 -SVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLP 152 (459)
Q Consensus 74 -~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p 152 (459)
+....+........+.+.+++++. ..++++||+|.+..|+..+|+++|||++.+++++++.++.+.+..... +..
T Consensus 87 ~~~~~~~~~a~~~~~~~~~~~l~~~---~~~p~cvI~D~f~~Wa~dVA~e~GIP~~~F~t~sA~~~~~~~~~~~~~-~~~ 162 (477)
T PLN02863 87 PSGFPLMIHALGELYAPLLSWFRSH---PSPPVAIISDMFLGWTQNLACQLGIRRFVFSPSGAMALSIMYSLWREM-PTK 162 (477)
T ss_pred hhhHHHHHHHHHHhHHHHHHHHHhC---CCCCeEEEEcCchHhHHHHHHHcCCCEEEEeccCHHHHHHHHHHhhcc-ccc
Confidence 111122222223344455555442 236799999999999999999999999999999999888877765322 111
Q ss_pred C--CCCCCc---ccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcC---CC
Q 012645 153 V--NQETVP---LTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGL---WP 224 (459)
Q Consensus 153 ~--~~~~~~---~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---~~ 224 (459)
. ...... ..+|++|.++..+++.++............+.+.......++++++|||+++|+...+.+... ++
T Consensus 163 ~~~~~~~~~~~~~~iPg~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~ 242 (477)
T PLN02863 163 INPDDQNEILSFSKIPNCPKYPWWQISSLYRSYVEGDPAWEFIKDSFRANIASWGLVVNSFTELEGIYLEHLKKELGHDR 242 (477)
T ss_pred ccccccccccccCCCCCCCCcChHhCchhhhccCccchHHHHHHHHHhhhccCCEEEEecHHHHHHHHHHHHHhhcCCCC
Confidence 0 000111 137888888888888765432222223344444444445677899999999999999888653 46
Q ss_pred eeeecccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEE
Q 012645 225 LVMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWV 304 (459)
Q Consensus 225 ~~~vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~ 304 (459)
++.|||+++... ... .....|...+. .++++.+||+.++++++|||||||+.....+++.+++.+++.++++|||+
T Consensus 243 v~~IGPL~~~~~-~~~--~~~~~~~~~~~-~~~~~~~WLd~~~~~svVyvsfGS~~~~~~~~~~ela~gL~~~~~~flw~ 318 (477)
T PLN02863 243 VWAVGPILPLSG-EKS--GLMERGGPSSV-SVDDVMTWLDTCEDHKVVYVCFGSQVVLTKEQMEALASGLEKSGVHFIWC 318 (477)
T ss_pred eEEeCCCccccc-ccc--cccccCCcccc-cHHHHHHHHhcCCCCceEEEEeeceecCCHHHHHHHHHHHHhCCCcEEEE
Confidence 999999975411 000 00011111111 24679999999988999999999999888999999999999999999999
Q ss_pred EeCCC------CCCchhhhhhcCC-CceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHH
Q 012645 305 VKENE------NKLPVEFVNSVGE-TGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAK 377 (459)
Q Consensus 305 ~~~~~------~~~~~~~~~~~~~-~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~ 377 (459)
++... ..+|++|.+++.+ ++++.+|+||.+||+|++|++|||||||||++||+++|||||++|++.||+.||+
T Consensus 319 ~~~~~~~~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~ 398 (477)
T PLN02863 319 VKEPVNEESDYSNIPSGFEDRVAGRGLVIRGWAPQVAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWPMAADQFVNAS 398 (477)
T ss_pred ECCCcccccchhhCCHHHHHHhccCCEEecCCCCHHHHhcCCCcCeEEecCCchHHHHHHHcCCCEEeCCccccchhhHH
Confidence 97432 3578888877654 4556699999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhceEEeeecCCCcccHHHHHHHHHHHhc-ChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Q 012645 378 FVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMD-GERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLLKA 453 (459)
Q Consensus 378 rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~~~ 453 (459)
++++.||+|+.+.....+..+.+++.++++++|. +. +||+||+++++.+++++.+||||..++++|++++.+.
T Consensus 399 ~v~~~~gvG~~~~~~~~~~~~~~~v~~~v~~~m~~~~---~~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~i~~~ 472 (477)
T PLN02863 399 LLVDELKVAVRVCEGADTVPDSDELARVFMESVSENQ---VERERAKELRRAALDAIKERGSSVKDLDGFVKHVVEL 472 (477)
T ss_pred HHHHhhceeEEeccCCCCCcCHHHHHHHHHHHhhccH---HHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHh
Confidence 9876559999885421124689999999999994 44 9999999999999999999999999999999999753
|
|
| >PLN00164 glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-61 Score=473.25 Aligned_cols=431 Identities=28% Similarity=0.432 Sum_probs=335.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCC----CeEEEEecCcccc----c----c---CC--CCceEEEcCCCCCCC
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKR----VKATLATTHYTVK----S----I---HA--TTVGVEPISDGFDEG 67 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~G----h~V~~~~~~~~~~----~----~---~~--~g~~~~~~~~~~~~~ 67 (459)
|+|.||+++|++++||++|++.||+.|+.+| +.|||++++.... . + .. .++.++.+|+.....
T Consensus 1 ~~~~HVVlvPfpaqGHi~P~l~LAk~La~~g~~~~~~vT~~~t~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~p~ 80 (480)
T PLN00164 1 MAAPTVVLLPVWGSGHLMSMLEAGKRLLASSGGGALSLTVLVMPPPTPESASEVAAHVRREAASGLDIRFHHLPAVEPPT 80 (480)
T ss_pred CCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCCCcEEEEEEEcCCCccchhHHHHHHHhhcccCCCCEEEEECCCCCCCC
Confidence 5678999999999999999999999999997 7899999875422 1 1 11 258999998653221
Q ss_pred CCCCCCCHHHHHHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhcc
Q 012645 68 GFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHG 147 (459)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~ 147 (459)
...+...++..+.....+.++++++.+ ..++++||+|.+..|+..+|+++|||++.++++++..++.+.+.+..
T Consensus 81 ---~~e~~~~~~~~~~~~~~~~l~~~L~~l---~~pv~cIV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~ 154 (480)
T PLN00164 81 ---DAAGVEEFISRYIQLHAPHVRAAIAGL---SCPVAALVVDFFCTPLLDVARELAVPAYVYFTSTAAMLALMLRLPAL 154 (480)
T ss_pred ---ccccHHHHHHHHHHhhhHHHHHHHHhc---CCCceEEEECCcchhHHHHHHHhCCCEEEEECccHHHHHHHhhhhhh
Confidence 112333444445555666777777665 12569999999999999999999999999999999888877766432
Q ss_pred CCCCC--CCCCCCcccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcC---
Q 012645 148 LLTLP--VNQETVPLTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGL--- 222 (459)
Q Consensus 148 ~~~~p--~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--- 222 (459)
....+ ....+.++.+|++|.++..+++........ .....+........+++++++|||++||+...+.+...
T Consensus 155 ~~~~~~~~~~~~~~~~iPGlp~l~~~dlp~~~~~~~~--~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~ 232 (480)
T PLN00164 155 DEEVAVEFEEMEGAVDVPGLPPVPASSLPAPVMDKKS--PNYAWFVYHGRRFMEAAGIIVNTAAELEPGVLAAIADGRCT 232 (480)
T ss_pred cccccCcccccCcceecCCCCCCChHHCCchhcCCCc--HHHHHHHHHHHhhhhcCEEEEechHHhhHHHHHHHHhcccc
Confidence 21111 111112345899988888888875543211 11233334445567789999999999999988888652
Q ss_pred -----CCeeeecccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhC
Q 012645 223 -----WPLVMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKAS 297 (459)
Q Consensus 223 -----~~~~~vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~ 297 (459)
++++.|||+..... . . .. ...++++.+||+.++++++|||||||+.....+++.+++.+++.+
T Consensus 233 ~~~~~~~v~~vGPl~~~~~--~--~-------~~-~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~q~~ela~gL~~s 300 (480)
T PLN00164 233 PGRPAPTVYPIGPVISLAF--T--P-------PA-EQPPHECVRWLDAQPPASVVFLCFGSMGFFDAPQVREIAAGLERS 300 (480)
T ss_pred ccCCCCceEEeCCCccccc--c--C-------CC-ccchHHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHc
Confidence 46999999974310 0 0 00 123567999999998899999999999888888999999999999
Q ss_pred CCcEEEEEeCCC-------------CCCchhhhhhcCCCceEE-eeecHHHHhcccCccceeccCchhhHHHhhhcCCee
Q 012645 298 EKPFLWVVKENE-------------NKLPVEFVNSVGETGLVV-RWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAV 363 (459)
Q Consensus 298 ~~~~v~~~~~~~-------------~~~~~~~~~~~~~~v~v~-~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~ 363 (459)
+.+|||++.... ..+|++|.+++.++..++ +|+||.+||+|+++++|||||||||++||+++||||
T Consensus 301 ~~~flWv~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~PQ~~iL~h~~vg~fvtH~GwnS~~Eai~~GVP~ 380 (480)
T PLN00164 301 GHRFLWVLRGPPAAGSRHPTDADLDELLPEGFLERTKGRGLVWPTWAPQKEILAHAAVGGFVTHCGWNSVLESLWHGVPM 380 (480)
T ss_pred CCCEEEEEcCCcccccccccccchhhhCChHHHHHhcCCCeEEeecCCHHHHhcCcccCeEEeecccchHHHHHHcCCCE
Confidence 999999997421 237788888887777666 999999999999999999999999999999999999
Q ss_pred eccccccchhhHHHHHHHhhhceEEeeecC--CCcccHHHHHHHHHHHhcCh--hhHHHHHHHHHHHHHHHHHHhcCCCc
Q 012645 364 VAVPQFSDQPTNAKFVEEVWEVGVRAKKNR--AGIVTGEELNKCVNEVMDGE--RSQKIKRNVSKWREFAKKAVSAGGSS 439 (459)
Q Consensus 364 li~P~~~DQ~~na~rv~~~~G~G~~~~~~~--~~~~~~~~l~~~i~~ll~~~--~~~~~~~~a~~l~~~~~~~~~~~g~s 439 (459)
|++|+++||+.||+++++.||+|+.+.... ++.++.++|.++|+++|.++ +++.+|+||+++++.+++++.+||||
T Consensus 381 l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~~~~~~r~~a~~~~~~~~~a~~~gGSS 460 (480)
T PLN00164 381 APWPLYAEQHLNAFELVADMGVAVAMKVDRKRDNFVEAAELERAVRSLMGGGEEEGRKAREKAAEMKAACRKAVEEGGSS 460 (480)
T ss_pred EeCCccccchhHHHHHHHHhCeEEEeccccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcH
Confidence 999999999999998865449999985321 11479999999999999874 36789999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcC
Q 012645 440 DKNIDEFVVRLLKADG 455 (459)
Q Consensus 440 ~~~~~~~~~~l~~~~~ 455 (459)
..++++|++++.+.+-
T Consensus 461 ~~~l~~~v~~~~~~~~ 476 (480)
T PLN00164 461 YAALQRLAREIRHGAV 476 (480)
T ss_pred HHHHHHHHHHHHhccC
Confidence 9999999999987653
|
|
| >PLN03015 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-60 Score=464.45 Aligned_cols=426 Identities=26% Similarity=0.412 Sum_probs=328.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEecCcccccc------CC----CCceEEEcCCCCCCCCCCCCC
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASK-RVKATLATTHYTVKSI------HA----TTVGVEPISDGFDEGGFKQAP 73 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~-Gh~V~~~~~~~~~~~~------~~----~g~~~~~~~~~~~~~~~~~~~ 73 (459)
|-+.||+++|+++.||++|++.||+.|+.+ |..|||++++.....+ .. .++.++.+|....++......
T Consensus 1 ~~~pHvvl~P~p~qGHi~P~l~LAk~La~~~g~~vT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~l~~~~~ 80 (470)
T PLN03015 1 MDQPHALLVASPGLGHLIPILELGNRLSSVLNIHVTILAVTSGSSSPTETEAIHAAAARTTCQITEIPSVDVDNLVEPDA 80 (470)
T ss_pred CCCcEEEEECCcccccHHHHHHHHHHHHhCCCCeEEEEECCCchhhhccccccccccCCCceEEEECCCCccccCCCCCc
Confidence 345799999999999999999999999977 9999999877543221 11 258899998432221101001
Q ss_pred CHHHHHHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCc-eEEEccchHHHHHHHHHhhccCCCCC
Q 012645 74 SVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIY-GAAMMTNSASVCSMYWQINHGLLTLP 152 (459)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP-~v~~~~~~~~~~~~~~~~~~~~~~~p 152 (459)
+....+......+.+.++++++++. .++++||+|.++.|+..+|+++||| .+.+++++++......+.+......+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~l~---~~~~ciV~D~f~~w~~~vA~~lgIP~~~~f~~~~a~~~~~~~~l~~~~~~~~ 157 (470)
T PLN03015 81 TIFTKMVVKMRAMKPAVRDAVKSMK---RKPTVMIVDFFGTALMSIADDVGVTAKYVYIPSHAWFLAVMVYLPVLDTVVE 157 (470)
T ss_pred cHHHHHHHHHHhchHHHHHHHHhcC---CCCeEEEEcCCcHHHHHHHHHcCCCEEEEEcCHHHHHHHHHHhhhhhhcccc
Confidence 3333334444466777888887763 2679999999999999999999999 57777777666655554432111111
Q ss_pred CC--CCCCcccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcC--------
Q 012645 153 VN--QETVPLTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGL-------- 222 (459)
Q Consensus 153 ~~--~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-------- 222 (459)
.. ....++.+|++|++...+++..+.... ... ...+.+......+++++++|||++||+...+.+.+.
T Consensus 158 ~~~~~~~~~~~vPg~p~l~~~dlp~~~~~~~-~~~-~~~~~~~~~~~~~a~gvlvNTf~eLE~~~~~~l~~~~~~~~~~~ 235 (470)
T PLN03015 158 GEYVDIKEPLKIPGCKPVGPKELMETMLDRS-DQQ-YKECVRSGLEVPMSDGVLVNTWEELQGNTLAALREDMELNRVMK 235 (470)
T ss_pred cccCCCCCeeeCCCCCCCChHHCCHhhcCCC-cHH-HHHHHHHHHhcccCCEEEEechHHHhHHHHHHHHhhcccccccC
Confidence 10 001235689998888888886553221 111 233334555677899999999999999998888653
Q ss_pred CCeeeecccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEE
Q 012645 223 WPLVMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFL 302 (459)
Q Consensus 223 ~~~~~vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v 302 (459)
++++.|||+.+.- .....++++.+|||.++++++|||||||....+.+++.+++.+|+.++++||
T Consensus 236 ~~v~~VGPl~~~~---------------~~~~~~~~~~~WLd~~~~~sVvyvsFGS~~~~~~~q~~ela~gl~~s~~~Fl 300 (470)
T PLN03015 236 VPVYPIGPIVRTN---------------VHVEKRNSIFEWLDKQGERSVVYVCLGSGGTLTFEQTVELAWGLELSGQRFV 300 (470)
T ss_pred CceEEecCCCCCc---------------ccccchHHHHHHHHhCCCCCEEEEECCcCCcCCHHHHHHHHHHHHhCCCcEE
Confidence 4699999997420 0112245799999999889999999999999999999999999999999999
Q ss_pred EEEeCC-------------C-CCCchhhhhhcCCCceEE-eeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccc
Q 012645 303 WVVKEN-------------E-NKLPVEFVNSVGETGLVV-RWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVP 367 (459)
Q Consensus 303 ~~~~~~-------------~-~~~~~~~~~~~~~~v~v~-~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P 367 (459)
|++... . +.+|++|.+++.++..++ +|+||.+||+|+++++|||||||||++||+++|||||++|
T Consensus 301 Wv~r~~~~~~~~~~~~~~~~~~~lp~~f~er~~~rGl~v~~W~PQ~~vL~h~~vg~fvtH~GwnS~~Eai~~GvP~v~~P 380 (470)
T PLN03015 301 WVLRRPASYLGASSSDDDQVSASLPEGFLDRTRGVGLVVTQWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPIVAWP 380 (470)
T ss_pred EEEecCccccccccccccchhhcCChHHHHhhccCceEEEecCCHHHHhccCccCeEEecCCchhHHHHHHcCCCEEecc
Confidence 999631 1 358889998888887655 9999999999999999999999999999999999999999
Q ss_pred cccchhhHHHHHHHhhhceEEeeec-CCCcccHHHHHHHHHHHhcC--hhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHH
Q 012645 368 QFSDQPTNAKFVEEVWEVGVRAKKN-RAGIVTGEELNKCVNEVMDG--ERSQKIKRNVSKWREFAKKAVSAGGSSDKNID 444 (459)
Q Consensus 368 ~~~DQ~~na~rv~~~~G~G~~~~~~-~~~~~~~~~l~~~i~~ll~~--~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~ 444 (459)
++.||+.||+++++.||+|+.+... ..+.++.++|.++|+++|.+ ++++++|+||+++++.+++++.+||||..+++
T Consensus 381 ~~~DQ~~na~~~~~~~gvg~~~~~~~~~~~v~~e~i~~~v~~lm~~~~eeg~~~R~ra~~lk~~a~~Av~eGGSS~~nl~ 460 (470)
T PLN03015 381 LYAEQWMNATLLTEEIGVAVRTSELPSEKVIGREEVASLVRKIVAEEDEEGQKIRAKAEEVRVSSERAWSHGGSSYNSLF 460 (470)
T ss_pred cccchHHHHHHHHHHhCeeEEecccccCCccCHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHH
Confidence 9999999999996666999999521 11268999999999999962 45789999999999999999999999999999
Q ss_pred HHHHHH
Q 012645 445 EFVVRL 450 (459)
Q Consensus 445 ~~~~~l 450 (459)
+|++++
T Consensus 461 ~~~~~~ 466 (470)
T PLN03015 461 EWAKRC 466 (470)
T ss_pred HHHHhc
Confidence 999886
|
|
| >PLN03004 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-60 Score=465.92 Aligned_cols=420 Identities=25% Similarity=0.444 Sum_probs=322.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCC--CeEEE--EecCccccc----cC-----CCCceEEEcCCCCCCCCC-C
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKR--VKATL--ATTHYTVKS----IH-----ATTVGVEPISDGFDEGGF-K 70 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~G--h~V~~--~~~~~~~~~----~~-----~~g~~~~~~~~~~~~~~~-~ 70 (459)
|.+.||+++|++++||++|++.||+.|+.+| +.|++ .+++.+... ++ .++++++.+|+..+.... .
T Consensus 1 ~~~~Hvvl~P~p~qGHi~P~l~LA~~La~~g~~~~vti~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~~~ 80 (451)
T PLN03004 1 MGEEAIVLYPAPPIGHLVSMVELGKTILSKNPSLSIHIILVPPPYQPESTATYISSVSSSFPSITFHHLPAVTPYSSSST 80 (451)
T ss_pred CCCcEEEEeCCcccchHHHHHHHHHHHHhCCCceEEEEEEecCcchhhhhhhhhccccCCCCCeEEEEcCCCCCCCCccc
Confidence 3457999999999999999999999999998 45555 444432211 11 147999999866432111 1
Q ss_pred CCCCHHHHHHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCC
Q 012645 71 QAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLT 150 (459)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 150 (459)
...+....+..........+.++++++.. ..++++||+|.+..|+..+|+++|||++.+++++++.++.+.+.+.....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~~pv~cII~D~~~~Wa~~vA~~lgIP~v~F~t~sA~~~~~~~~~~~~~~~ 159 (451)
T PLN03004 81 SRHHHESLLLEILCFSNPSVHRTLFSLSR-NFNVRAMIIDFFCTAVLDITADFTFPVYFFYTSGAACLAFSFYLPTIDET 159 (451)
T ss_pred cccCHHHHHHHHHHhhhHHHHHHHHhcCC-CCCceEEEECCcchhHHHHHHHhCCCEEEEeCHhHHHHHHHHHHHhcccc
Confidence 11223333333444566677777777632 12469999999999999999999999999999999888888775432211
Q ss_pred CCCC--CCCCcccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcC---CCe
Q 012645 151 LPVN--QETVPLTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGL---WPL 225 (459)
Q Consensus 151 ~p~~--~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---~~~ 225 (459)
.+.. ....++.+|++|.+...+++.+..... ......+.+......+++++++|||++||+...+.+... +++
T Consensus 160 ~~~~~~~~~~~v~iPg~p~l~~~dlp~~~~~~~--~~~~~~~~~~~~~~~~~~~vl~NTf~eLE~~~l~~l~~~~~~~~v 237 (451)
T PLN03004 160 TPGKNLKDIPTVHIPGVPPMKGSDMPKAVLERD--DEVYDVFIMFGKQLSKSSGIIINTFDALENRAIKAITEELCFRNI 237 (451)
T ss_pred ccccccccCCeecCCCCCCCChHHCchhhcCCc--hHHHHHHHHHHHhhcccCeeeeeeHHHhHHHHHHHHHhcCCCCCE
Confidence 1111 111235689998888888887654321 223344455555667788999999999999998888652 469
Q ss_pred eeecccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEE
Q 012645 226 VMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVV 305 (459)
Q Consensus 226 ~~vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~ 305 (459)
+.|||++... ... + + . ...+.++.+||+.++++++|||||||+...+.+++++++.+|+.++++|||++
T Consensus 238 ~~vGPl~~~~----~~~-~---~-~--~~~~~~c~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~~FlW~~ 306 (451)
T PLN03004 238 YPIGPLIVNG----RIE-D---R-N--DNKAVSCLNWLDSQPEKSVVFLCFGSLGLFSKEQVIEIAVGLEKSGQRFLWVV 306 (451)
T ss_pred EEEeeeccCc----ccc-c---c-c--cchhhHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEE
Confidence 9999997431 000 0 0 0 11235689999999889999999999999999999999999999999999999
Q ss_pred eCC--------C--CCCchhhhhhcCC-CceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhh
Q 012645 306 KEN--------E--NKLPVEFVNSVGE-TGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPT 374 (459)
Q Consensus 306 ~~~--------~--~~~~~~~~~~~~~-~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~ 374 (459)
... . +.+|++|.+++.+ ++++.+|+||.+||+|+++++||||||+||++||+++|||||++|++.||+.
T Consensus 307 r~~~~~~~~~~~~~~~lp~gf~er~~~~g~~v~~W~PQ~~iL~H~~v~~FvTH~G~nS~lEal~~GVP~v~~P~~~DQ~~ 386 (451)
T PLN03004 307 RNPPELEKTELDLKSLLPEGFLSRTEDKGMVVKSWAPQVPVLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWPLYAEQRF 386 (451)
T ss_pred cCCccccccccchhhhCChHHHHhccCCcEEEEeeCCHHHHhCCCccceEeccCcchHHHHHHHcCCCEEeccccccchh
Confidence 853 1 2378899988875 5566799999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHH
Q 012645 375 NAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDK 441 (459)
Q Consensus 375 na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~ 441 (459)
||+++++.||+|+.+...+.+.++.++|.++|+++|+|+ +|++|++++++..++++++||||..
T Consensus 387 na~~~~~~~g~g~~l~~~~~~~~~~e~l~~av~~vm~~~---~~r~~a~~~~~~a~~Av~~GGSS~~ 450 (451)
T PLN03004 387 NRVMIVDEIKIAISMNESETGFVSSTEVEKRVQEIIGEC---PVRERTMAMKNAAELALTETGSSHT 450 (451)
T ss_pred hHHHHHHHhCceEEecCCcCCccCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 999998644999999753112579999999999999987 9999999999999999999999864
|
|
| >PLN02670 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-60 Score=464.29 Aligned_cols=434 Identities=24% Similarity=0.398 Sum_probs=327.3
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCC------CCceEEEcC----CCCCCCCCCCCCCH
Q 012645 6 ERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHA------TTVGVEPIS----DGFDEGGFKQAPSV 75 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~------~g~~~~~~~----~~~~~~~~~~~~~~ 75 (459)
.+.||+++|++++||++|++.||+.|+.+|..|||++++.+...+.. .+++++.+| ++++.+... ..+.
T Consensus 5 ~~~HVvl~P~paqGHi~P~l~LAk~La~~G~~vT~v~t~~n~~~~~~~~~~~~~~i~~~~lp~p~~dglp~~~~~-~~~~ 83 (472)
T PLN02670 5 EVLHVAMFPWLAMGHLIPFLRLSKLLAQKGHKISFISTPRNLHRLPKIPSQLSSSITLVSFPLPSVPGLPSSAES-STDV 83 (472)
T ss_pred CCcEEEEeCChhhhHHHHHHHHHHHHHhCCCEEEEEeCCchHHhhhhccccCCCCeeEEECCCCccCCCCCCccc-cccc
Confidence 45799999999999999999999999999999999999987644431 368899887 455543211 1122
Q ss_pred ----HHHHHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhc--cCC
Q 012645 76 ----KAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINH--GLL 149 (459)
Q Consensus 76 ----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~--~~~ 149 (459)
..++....+.+.+.++++++++ ++++||+|.+..|+..+|+++|||++.++++++..++.+.+... ...
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~l~~~-----~~~cvI~D~f~~wa~~vA~~~gIP~~~f~~~~a~~~~~~~~~~~~~~~~ 158 (472)
T PLN02670 84 PYTKQQLLKKAFDLLEPPLTTFLETS-----KPDWIIYDYASHWLPSIAAELGISKAFFSLFTAATLSFIGPPSSLMEGG 158 (472)
T ss_pred chhhHHHHHHHHHHhHHHHHHHHHhC-----CCcEEEECCcchhHHHHHHHcCCCEEEEehhhHHHHHHHhhhHhhhhcc
Confidence 1233344445566677777654 68999999999999999999999999999999887777553321 110
Q ss_pred CCCCCCCCCcccCCCCCC------CCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcC-
Q 012645 150 TLPVNQETVPLTLPGLPS------LASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGL- 222 (459)
Q Consensus 150 ~~p~~~~~~~~~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~- 222 (459)
..+... .....+|++++ +...+++.+.............+.+......+++++++|||.+||+...+.+.+.
T Consensus 159 ~~~~~~-~~~~~~p~~~P~~~~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~gvlvNTf~eLE~~~l~~l~~~~ 237 (472)
T PLN02670 159 DLRSTA-EDFTVVPPWVPFESNIVFRYHEVTKYVEKTEEDETGPSDSVRFGFAIGGSDVVIIRSSPEFEPEWFDLLSDLY 237 (472)
T ss_pred cCCCcc-ccccCCCCcCCCCccccccHHHhhHHHhccCccchHHHHHHHHHhhcccCCEEEEeCHHHHhHHHHHHHHHhh
Confidence 111100 00011444321 2334566554322111112233334444566789999999999999999888664
Q ss_pred -CCeeeecccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcE
Q 012645 223 -WPLVMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPF 301 (459)
Q Consensus 223 -~~~~~vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~ 301 (459)
.+++.|||+.+... .. .. +. ......++++.+||+.++++++|||||||+...+.+++.+++.+++.++++|
T Consensus 238 ~~~v~~VGPl~~~~~-~~-~~-~~----~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gl~~s~~~F 310 (472)
T PLN02670 238 RKPIIPIGFLPPVIE-DD-EE-DD----TIDVKGWVRIKEWLDKQRVNSVVYVALGTEASLRREEVTELALGLEKSETPF 310 (472)
T ss_pred CCCeEEEecCCcccc-cc-cc-cc----ccccchhHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCE
Confidence 46999999975310 00 00 00 0000123569999999988899999999999999999999999999999999
Q ss_pred EEEEeCCC-------CCCchhhhhhcCCCceEE-eeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchh
Q 012645 302 LWVVKENE-------NKLPVEFVNSVGETGLVV-RWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQP 373 (459)
Q Consensus 302 v~~~~~~~-------~~~~~~~~~~~~~~v~v~-~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~ 373 (459)
||++.... ..+|++|.+++.++..++ +|+||.+||+|+++++|||||||||++||+++|||||++|++.||+
T Consensus 311 lWv~r~~~~~~~~~~~~lp~~f~~~~~~rG~vv~~W~PQ~~IL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~ 390 (472)
T PLN02670 311 FWVLRNEPGTTQNALEMLPDGFEERVKGRGMIHVGWVPQVKILSHESVGGFLTHCGWNSVVEGLGFGRVLILFPVLNEQG 390 (472)
T ss_pred EEEEcCCcccccchhhcCChHHHHhccCCCeEEeCcCCHHHHhcCcccceeeecCCcchHHHHHHcCCCEEeCcchhccH
Confidence 99998531 258899998888877765 9999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHhhhceEEeeecC-CCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Q 012645 374 TNAKFVEEVWEVGVRAKKNR-AGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLLK 452 (459)
Q Consensus 374 ~na~rv~~~~G~G~~~~~~~-~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~~ 452 (459)
.||++++++ |+|+.+...+ .+.++.++|.++|+++|.+++|++||+||+++++.+++ .+....++++|++.+.+
T Consensus 391 ~Na~~v~~~-g~Gv~l~~~~~~~~~~~e~i~~av~~vm~~~~g~~~r~~a~~l~~~~~~----~~~~~~~~~~~~~~l~~ 465 (472)
T PLN02670 391 LNTRLLHGK-KLGLEVPRDERDGSFTSDSVAESVRLAMVDDAGEEIRDKAKEMRNLFGD----MDRNNRYVDELVHYLRE 465 (472)
T ss_pred HHHHHHHHc-CeeEEeeccccCCcCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHhC----cchhHHHHHHHHHHHHH
Confidence 999999998 9999997531 12589999999999999887677999999999999986 47778999999999998
Q ss_pred hcCCCC
Q 012645 453 ADGKSL 458 (459)
Q Consensus 453 ~~~~~~ 458 (459)
..+..+
T Consensus 466 ~~~~~~ 471 (472)
T PLN02670 466 NRSSRL 471 (472)
T ss_pred hccccC
Confidence 775443
|
|
| >PLN02764 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-60 Score=458.39 Aligned_cols=418 Identities=26% Similarity=0.416 Sum_probs=320.6
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCC----C-C--ceEEEcC--CCCCCCCCCC---CC
Q 012645 6 ERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHA----T-T--VGVEPIS--DGFDEGGFKQ---AP 73 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~----~-g--~~~~~~~--~~~~~~~~~~---~~ 73 (459)
.|+||+++|+++.||++|++.||+.|+.+|+.|||++++.+...+.. + + +.+.++| ++++.+.... ..
T Consensus 4 ~~~Hvvl~P~paqGHi~P~l~LAk~La~~g~~vT~~tt~~~~~~~~~~~~~~~~~~v~~~~~p~~~glp~g~e~~~~~~~ 83 (453)
T PLN02764 4 LKFHVLMYPWFATGHMTPFLFLANKLAEKGHTVTFLLPKKALKQLEHLNLFPHNIVFRSVTVPHVDGLPVGTETVSEIPV 83 (453)
T ss_pred CCcEEEEECCcccccHHHHHHHHHHHHhCCCEEEEEeCcchhhhhcccccCCCCceEEEEECCCcCCCCCcccccccCCh
Confidence 47999999999999999999999999999999999999987554432 1 2 6677777 5555432111 10
Q ss_pred CHHHHHHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCC
Q 012645 74 SVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPV 153 (459)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~ 153 (459)
.....+........+.+.++++.+ ++|+||+|. +.|+..+|+++|||++.++++++..++.+.. ..+..
T Consensus 84 ~~~~~~~~a~~~~~~~~~~~l~~~-----~~~~iV~D~-~~w~~~vA~~~gIP~~~f~~~~a~~~~~~~~-~~~~~---- 152 (453)
T PLN02764 84 TSADLLMSAMDLTRDQVEVVVRAV-----EPDLIFFDF-AHWIPEVARDFGLKTVKYVVVSASTIASMLV-PGGEL---- 152 (453)
T ss_pred hHHHHHHHHHHHhHHHHHHHHHhC-----CCCEEEECC-chhHHHHHHHhCCCEEEEEcHHHHHHHHHhc-ccccC----
Confidence 111222233334456677777664 679999995 8899999999999999999999877766542 11110
Q ss_pred CCCCCcccCCCCCC----CCCCCCCcccc--CCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcC--CCe
Q 012645 154 NQETVPLTLPGLPS----LASSDLPSFLA--QPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGL--WPL 225 (459)
Q Consensus 154 ~~~~~~~~~p~~~~----~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~ 225 (459)
...+|++|. +...+++.+.. .............+.......++++++|||+++|+...+.+... +++
T Consensus 153 -----~~~~pglp~~~v~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~vlvNTf~eLE~~~~~~~~~~~~~~v 227 (453)
T PLN02764 153 -----GVPPPGYPSSKVLLRKQDAYTMKNLEPTNTIDVGPNLLERVTTSLMNSDVIAIRTAREIEGNFCDYIEKHCRKKV 227 (453)
T ss_pred -----CCCCCCCCCCcccCcHhhCcchhhcCCCccchhHHHHHHHHHHhhccCCEEEEeccHHhhHHHHHHHHhhcCCcE
Confidence 012477762 44455554321 11111122333344435566788999999999999999888654 469
Q ss_pred eeecccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEE
Q 012645 226 VMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVV 305 (459)
Q Consensus 226 ~~vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~ 305 (459)
+.|||+++.. + + ....++++.+|||.++++++|||||||......+++.++..+|+..+.+|+|++
T Consensus 228 ~~VGPL~~~~--------~---~---~~~~~~~cl~WLD~q~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~pflwv~ 293 (453)
T PLN02764 228 LLTGPVFPEP--------D---K---TRELEERWVKWLSGYEPDSVVFCALGSQVILEKDQFQELCLGMELTGSPFLVAV 293 (453)
T ss_pred EEeccCccCc--------c---c---cccchhHHHHHHhCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCeEEEE
Confidence 9999997541 0 0 011245699999999999999999999999899999999999999999999999
Q ss_pred eCCC------CCCchhhhhhcCCCceEE-eeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHH
Q 012645 306 KENE------NKLPVEFVNSVGETGLVV-RWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKF 378 (459)
Q Consensus 306 ~~~~------~~~~~~~~~~~~~~v~v~-~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~r 378 (459)
+... +.+|++|.+++.++..++ +|+||.+||+|++|++|||||||||++||+++|||||++|++.||+.||++
T Consensus 294 r~~~~~~~~~~~lp~~f~~r~~grG~v~~~W~PQ~~vL~h~~v~~FvtH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~ 373 (453)
T PLN02764 294 KPPRGSSTIQEALPEGFEERVKGRGVVWGGWVQQPLILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVPQLGDQVLNTRL 373 (453)
T ss_pred eCCCCCcchhhhCCcchHhhhccCCcEEeCCCCHHHHhcCcccCeEEecCCchHHHHHHHcCCCEEeCCcccchHHHHHH
Confidence 8531 468999999988887666 999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhceEEeeecCCCcccHHHHHHHHHHHhcC--hhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhcCC
Q 012645 379 VEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDG--ERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLLKADGK 456 (459)
Q Consensus 379 v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~--~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~~~~~~ 456 (459)
+++.||+|+.+.....+.++.++|.++|+++|++ .+++++|++++++++.+++ +|||..++++|++++.+..++
T Consensus 374 l~~~~g~gv~~~~~~~~~~~~e~i~~av~~vm~~~~~~g~~~r~~a~~~~~~~~~----~GSS~~~l~~lv~~~~~~~~~ 449 (453)
T PLN02764 374 LSDELKVSVEVAREETGWFSKESLRDAINSVMKRDSEIGNLVKKNHTKWRETLAS----PGLLTGYVDNFIESLQDLVSG 449 (453)
T ss_pred HHHHhceEEEeccccCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHHhccc
Confidence 9764499988753211158999999999999987 3467899999999999854 799999999999999987765
Q ss_pred C
Q 012645 457 S 457 (459)
Q Consensus 457 ~ 457 (459)
+
T Consensus 450 ~ 450 (453)
T PLN02764 450 T 450 (453)
T ss_pred c
Confidence 4
|
|
| >PLN02167 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-60 Score=468.59 Aligned_cols=434 Identities=28% Similarity=0.455 Sum_probs=325.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCC---eEEEEecCcccc-----ccC-----CCCceEEEcCCCCCCCCCCC
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRV---KATLATTHYTVK-----SIH-----ATTVGVEPISDGFDEGGFKQ 71 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh---~V~~~~~~~~~~-----~~~-----~~g~~~~~~~~~~~~~~~~~ 71 (459)
|++.||+++|++++||++|++.||+.|+.+|. .||+.++..... .+. .++++|+.+|+.......+.
T Consensus 1 ~~~~hVv~~PfpaqGHi~P~l~LAk~La~~G~~~t~vt~~~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~p~~~~~ 80 (475)
T PLN02167 1 KKEAELIFVPFPSTGHILVTIEFAKRLINLDRRIHTITILYWSLPFAPQADAFLKSLIASEPRIRLVTLPEVQDPPPMEL 80 (475)
T ss_pred CCccEEEEeCChhhhhHHHHHHHHHHHHhCCCCeEEEEEEECCCCcchhhhHHHhhcccCCCCeEEEECCCCCCCccccc
Confidence 46789999999999999999999999999984 466666442211 111 13699999986432111010
Q ss_pred -CCCHHHHHHHHHHhchHHHHHHHHHhhcC----CC-CccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhh
Q 012645 72 -APSVKAYLESFKTVGSRTLAEVILKYKDS----ES-PVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQIN 145 (459)
Q Consensus 72 -~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~-~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~ 145 (459)
.......+..+...+...+++.++++... .. ++++||+|.++.|+..+|+++|||++.+++++++.++.+.+.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~pv~cvV~D~f~~Wa~dVA~elgIP~v~F~t~~A~~~~~~~~~~ 160 (475)
T PLN02167 81 FVKASEAYILEFVKKMVPLVRDALSTLVSSRDESDSVRVAGLVLDFFCVPLIDVGNEFNLPSYIFLTCNAGFLGMMKYLP 160 (475)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCeEEEEECCccHHHHHHHHHhCCCEEEEECccHHHHHHHHHHH
Confidence 11111222223334445555655554311 12 4599999999999999999999999999999998887776554
Q ss_pred ccCCCCCC---CCC-CCcccCCCCC-CCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHh
Q 012645 146 HGLLTLPV---NQE-TVPLTLPGLP-SLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAML 220 (459)
Q Consensus 146 ~~~~~~p~---~~~-~~~~~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 220 (459)
......+. ... +.++.+|+++ .++..+++....... ....+.+......+++++++|||++||+...+.+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~iPgl~~~l~~~dlp~~~~~~~----~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~~~l~ 236 (475)
T PLN02167 161 ERHRKTASEFDLSSGEEELPIPGFVNSVPTKVLPPGLFMKE----SYEAWVEIAERFPEAKGILVNSFTELEPNAFDYFS 236 (475)
T ss_pred HhccccccccccCCCCCeeECCCCCCCCChhhCchhhhCcc----hHHHHHHHHHhhcccCEeeeccHHHHHHHHHHHHH
Confidence 32211110 001 1235589984 577777775443221 12233444455677899999999999999888875
Q ss_pred c----CCCeeeecccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHh
Q 012645 221 G----LWPLVMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKA 296 (459)
Q Consensus 221 ~----~~~~~~vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~ 296 (459)
. .+++++|||+.+.. .. . .. .......+++.+||+.++++++|||||||+...+.+++.+++.+++.
T Consensus 237 ~~~~~~p~v~~vGpl~~~~---~~-~---~~--~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~ela~~l~~ 307 (475)
T PLN02167 237 RLPENYPPVYPVGPILSLK---DR-T---SP--NLDSSDRDRIMRWLDDQPESSVVFLCFGSLGSLPAPQIKEIAQALEL 307 (475)
T ss_pred hhcccCCeeEEeccccccc---cc-c---CC--CCCcchhHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHh
Confidence 4 25799999997631 00 0 00 11112245799999999889999999999988889999999999999
Q ss_pred CCCcEEEEEeCCC-------CCCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccc
Q 012645 297 SEKPFLWVVKENE-------NKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQF 369 (459)
Q Consensus 297 ~~~~~v~~~~~~~-------~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~ 369 (459)
++++|||+++... ..+|++|.+++.+++++++|+||.+||+|++|++|||||||||++||+++|||||++|++
T Consensus 308 ~~~~flw~~~~~~~~~~~~~~~lp~~~~er~~~rg~v~~w~PQ~~iL~h~~vg~fvtH~G~nS~~Eal~~GvP~l~~P~~ 387 (475)
T PLN02167 308 VGCRFLWSIRTNPAEYASPYEPLPEGFMDRVMGRGLVCGWAPQVEILAHKAIGGFVSHCGWNSVLESLWFGVPIATWPMY 387 (475)
T ss_pred CCCcEEEEEecCcccccchhhhCChHHHHHhccCeeeeccCCHHHHhcCcccCeEEeeCCcccHHHHHHcCCCEEecccc
Confidence 9999999987431 247889998898999999999999999999999999999999999999999999999999
Q ss_pred cchhhHHHH-HHHhhhceEEeeecC----CCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHH
Q 012645 370 SDQPTNAKF-VEEVWEVGVRAKKNR----AGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNID 444 (459)
Q Consensus 370 ~DQ~~na~r-v~~~~G~G~~~~~~~----~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~ 444 (459)
.||+.||++ ++++ |+|+.+.... ++.++.++|.++|+++|.++ +.|++||+++++.+++++.+||||..+++
T Consensus 388 ~DQ~~na~~~~~~~-g~g~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~--~~~r~~a~~~~~~~~~av~~gGsS~~~l~ 464 (475)
T PLN02167 388 AEQQLNAFTMVKEL-GLAVELRLDYVSAYGEIVKADEIAGAVRSLMDGE--DVPRKKVKEIAEAARKAVMDGGSSFVAVK 464 (475)
T ss_pred ccchhhHHHHHHHh-CeeEEeecccccccCCcccHHHHHHHHHHHhcCC--HHHHHHHHHHHHHHHHHHhCCCcHHHHHH
Confidence 999999987 5666 9999886420 12579999999999999764 38999999999999999999999999999
Q ss_pred HHHHHHHHhc
Q 012645 445 EFVVRLLKAD 454 (459)
Q Consensus 445 ~~~~~l~~~~ 454 (459)
+||++|.+..
T Consensus 465 ~~v~~i~~~~ 474 (475)
T PLN02167 465 RFIDDLLGDH 474 (475)
T ss_pred HHHHHHHhcC
Confidence 9999998764
|
|
| >PLN03007 UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-60 Score=470.69 Aligned_cols=435 Identities=29% Similarity=0.468 Sum_probs=314.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCC-------------CceEEEcC---CCCCCCCC
Q 012645 6 ERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHAT-------------TVGVEPIS---DGFDEGGF 69 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~-------------g~~~~~~~---~~~~~~~~ 69 (459)
+++||+++|+|+.||++|++.||+.|++|||+|||++++.+...+++. .+.+.++| ++++.+..
T Consensus 4 ~~~hVvlvp~pa~GHi~P~L~LAk~L~~rG~~VT~vtt~~~~~~i~~~~a~~~~~~~~~~~~~~~~~~p~~~~glP~g~e 83 (482)
T PLN03007 4 EKLHILFFPFMAHGHMIPTLDMAKLFSSRGAKSTILTTPLNAKIFEKPIEAFKNLNPGLEIDIQIFNFPCVELGLPEGCE 83 (482)
T ss_pred CCcEEEEECCCccccHHHHHHHHHHHHhCCCEEEEEECCCchhhhhhhhhhhcccCCCCcceEEEeeCCCCcCCCCCCcc
Confidence 467999999999999999999999999999999999999887655432 23334455 34444321
Q ss_pred CCC-------CCHHHHHHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHH
Q 012645 70 KQA-------PSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYW 142 (459)
Q Consensus 70 ~~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~ 142 (459)
... .....+...+.... ..+...++++... .++|+||+|.++.|+..+|+++|||++.+++++++......
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~l~~~l~~-~~~~~IV~D~~~~w~~~vA~~lgIP~v~f~~~~a~~~~~~~ 161 (482)
T PLN03007 84 NVDFITSNNNDDSGDLFLKFLFST-KYFKDQLEKLLET-TRPDCLVADMFFPWATEAAEKFGVPRLVFHGTGYFSLCASY 161 (482)
T ss_pred cccccccccccchHHHHHHHHHHH-HHHHHHHHHHHhc-CCCCEEEECCcchhHHHHHHHhCCCeEEeecccHHHHHHHH
Confidence 110 01112232232221 2222233332211 27899999999999999999999999999998876655544
Q ss_pred HhhccC--CCCCCCCCCCcccCCCCCC---CCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHH
Q 012645 143 QINHGL--LTLPVNQETVPLTLPGLPS---LASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLR 217 (459)
Q Consensus 143 ~~~~~~--~~~p~~~~~~~~~~p~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 217 (459)
...... ...+. ....+.+|++|. +...+++.. .....+...+........+.+++++|++.++|+...+
T Consensus 162 ~~~~~~~~~~~~~--~~~~~~~pg~p~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~vl~Nt~~~le~~~~~ 235 (482)
T PLN03007 162 CIRVHKPQKKVAS--SSEPFVIPDLPGDIVITEEQINDA----DEESPMGKFMKEVRESEVKSFGVLVNSFYELESAYAD 235 (482)
T ss_pred HHHhcccccccCC--CCceeeCCCCCCccccCHHhcCCC----CCchhHHHHHHHHHhhcccCCEEEEECHHHHHHHHHH
Confidence 322110 00110 011234777762 222233321 1112233444444445667889999999999998888
Q ss_pred HHhcC--CCeeeecccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHH
Q 012645 218 AMLGL--WPLVMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLK 295 (459)
Q Consensus 218 ~~~~~--~~~~~vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~ 295 (459)
.+.+. .++++|||+..... ........+... ...++++.+||+.++++++|||||||+.....+.+.+++.+++
T Consensus 236 ~~~~~~~~~~~~VGPl~~~~~---~~~~~~~~~~~~-~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~~~~l~ 311 (482)
T PLN03007 236 FYKSFVAKRAWHIGPLSLYNR---GFEEKAERGKKA-NIDEQECLKWLDSKKPDSVIYLSFGSVASFKNEQLFEIAAGLE 311 (482)
T ss_pred HHHhccCCCEEEEcccccccc---ccccccccCCcc-ccchhHHHHHHhcCCCCceEEEeecCCcCCCHHHHHHHHHHHH
Confidence 88653 35999999765310 000000001111 1125679999999988999999999998888889999999999
Q ss_pred hCCCcEEEEEeCCC------CCCchhhhhhc-CCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeecccc
Q 012645 296 ASEKPFLWVVKENE------NKLPVEFVNSV-GETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQ 368 (459)
Q Consensus 296 ~~~~~~v~~~~~~~------~~~~~~~~~~~-~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~ 368 (459)
.++++|||+++... ..+|++|.+++ +.|+++.+|+||.+||+|+++++||||||+||++||+++|||||++|+
T Consensus 312 ~~~~~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GVP~v~~P~ 391 (482)
T PLN03007 312 GSGQNFIWVVRKNENQGEKEEWLPEGFEERTKGKGLIIRGWAPQVLILDHQATGGFVTHCGWNSLLEGVAAGLPMVTWPV 391 (482)
T ss_pred HCCCCEEEEEecCCcccchhhcCCHHHHHHhccCCEEEecCCCHHHHhccCccceeeecCcchHHHHHHHcCCCeeeccc
Confidence 99999999998632 25788888775 466777799999999999999999999999999999999999999999
Q ss_pred ccchhhHHHHHHHhhhceEEeeec-----CCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHH
Q 012645 369 FSDQPTNAKFVEEVWEVGVRAKKN-----RAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNI 443 (459)
Q Consensus 369 ~~DQ~~na~rv~~~~G~G~~~~~~-----~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~ 443 (459)
+.||+.||+++++.|++|..+... ..+.++.++|.++|+++|.++++++||+||+++++.+++++.+||||..++
T Consensus 392 ~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~~~~~~r~~a~~~~~~a~~a~~~gGsS~~~l 471 (482)
T PLN03007 392 GAEQFYNEKLVTQVLRTGVSVGAKKLVKVKGDFISREKVEKAVREVIVGEEAEERRLRAKKLAEMAKAAVEEGGSSFNDL 471 (482)
T ss_pred hhhhhhhHHHHHHhhcceeEeccccccccccCcccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhCCCcHHHHH
Confidence 999999999988654666554210 011689999999999999987788999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 012645 444 DEFVVRLLK 452 (459)
Q Consensus 444 ~~~~~~l~~ 452 (459)
++|++.+.+
T Consensus 472 ~~~v~~~~~ 480 (482)
T PLN03007 472 NKFMEELNS 480 (482)
T ss_pred HHHHHHHHh
Confidence 999999875
|
|
| >PLN02534 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-59 Score=460.40 Aligned_cols=435 Identities=28% Similarity=0.486 Sum_probs=323.3
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCC---------CCceEEEcC-----CCCCCCCCCC
Q 012645 6 ERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHA---------TTVGVEPIS-----DGFDEGGFKQ 71 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~---------~g~~~~~~~-----~~~~~~~~~~ 71 (459)
++.||+++|+++.||++|++.||+.|+.+|+.|||++++.+...+.. ..++|+.+| ++++.+....
T Consensus 7 ~~~Hvv~vPfpaqGHi~P~l~LAk~La~~G~~vT~v~t~~n~~~~~~~~~~~~~~~~~i~~~~lp~p~~~dglp~~~~~~ 86 (491)
T PLN02534 7 KQLHFVLIPLMAQGHMIPMIDMARLLAERGVIVSLVTTPQNASRFAKTIDRARESGLPIRLVQIPFPCKEVGLPIGCENL 86 (491)
T ss_pred CCCEEEEECCCCcchHHHHHHHHHHHHhCCCeEEEEECCCcHHHHhhhhhhccccCCCeEEEEcCCCCccCCCCCCcccc
Confidence 34799999999999999999999999999999999999877543322 138899887 4665442111
Q ss_pred C--C--CHHHHHHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhh--
Q 012645 72 A--P--SVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQIN-- 145 (459)
Q Consensus 72 ~--~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~-- 145 (459)
. . .....+........+.+.++++.. ..++++||+|.++.|+..+|+++|||++.+++++++.........
T Consensus 87 ~~~~~~~~~~~~~~~~~~l~~~l~~lL~~~---~~pp~cIV~D~f~~Wa~dVA~~lgIP~v~F~t~~a~~~~~~~~~~~~ 163 (491)
T PLN02534 87 DTLPSRDLLRKFYDAVDKLQQPLERFLEQA---KPPPSCIISDKCLSWTSKTAQRFNIPRIVFHGMCCFSLLSSHNIRLH 163 (491)
T ss_pred ccCCcHHHHHHHHHHHHHhHHHHHHHHHhc---CCCCcEEEECCccHHHHHHHHHhCCCeEEEecchHHHHHHHHHHHHh
Confidence 1 1 112122222223455666666542 236799999999999999999999999999998887666543222
Q ss_pred ccCCCCCCCCCCCcccCCCCCC---CCCCCCCccccCCCCChHHHHHHHHHhhc-ccCCceEEEcchhHhhHHHHHHHhc
Q 012645 146 HGLLTLPVNQETVPLTLPGLPS---LASSDLPSFLAQPASNPAYLAAILEQFGS-LNKNDWVLCNSFEELEKELLRAMLG 221 (459)
Q Consensus 146 ~~~~~~p~~~~~~~~~~p~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~ 221 (459)
......+ ....++.+|++|+ +...+++..+..... . ..+...... ...++++++|||.+||+...+.+..
T Consensus 164 ~~~~~~~--~~~~~~~iPg~p~~~~l~~~dlp~~~~~~~~---~-~~~~~~~~~~~~~a~~vlvNTf~eLE~~~l~~l~~ 237 (491)
T PLN02534 164 NAHLSVS--SDSEPFVVPGMPQSIEITRAQLPGAFVSLPD---L-DDVRNKMREAESTAFGVVVNSFNELEHGCAEAYEK 237 (491)
T ss_pred cccccCC--CCCceeecCCCCccccccHHHCChhhcCccc---H-HHHHHHHHhhcccCCEEEEecHHHhhHHHHHHHHh
Confidence 1111111 1123455788873 556666654422111 1 222222222 2346799999999999998888865
Q ss_pred C--CCeeeecccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCC
Q 012645 222 L--WPLVMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEK 299 (459)
Q Consensus 222 ~--~~~~~vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~ 299 (459)
. .+++.|||+...... .......+ .......+++.+||+.++++++|||||||......+.+.+++.+++.++.
T Consensus 238 ~~~~~v~~VGPL~~~~~~---~~~~~~~~-~~~~~~~~~cl~wLd~~~~~sVvyvsfGS~~~~~~~q~~e~a~gl~~~~~ 313 (491)
T PLN02534 238 AIKKKVWCVGPVSLCNKR---NLDKFERG-NKASIDETQCLEWLDSMKPRSVIYACLGSLCRLVPSQLIELGLGLEASKK 313 (491)
T ss_pred hcCCcEEEECcccccccc---cccccccC-CccccchHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHhCCC
Confidence 3 469999999753100 00000001 11111234689999999889999999999999999999999999999999
Q ss_pred cEEEEEeCCC------C-CCchhhhhhc-CCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccc
Q 012645 300 PFLWVVKENE------N-KLPVEFVNSV-GETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSD 371 (459)
Q Consensus 300 ~~v~~~~~~~------~-~~~~~~~~~~-~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~D 371 (459)
+|||++.... . .+|++|.+++ +.++++.+|+||.+||+|+++++||||||+||++||+++|||||++|++.|
T Consensus 314 ~flW~~r~~~~~~~~~~~~~p~gf~~~~~~~g~~v~~w~pq~~iL~h~~v~~fvtH~G~ns~~ea~~~GvP~v~~P~~~d 393 (491)
T PLN02534 314 PFIWVIKTGEKHSELEEWLVKENFEERIKGRGLLIKGWAPQVLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWPLFAE 393 (491)
T ss_pred CEEEEEecCccccchhhhcCchhhHHhhccCCeeccCCCCHHHHhcCCccceEEecCccHHHHHHHHcCCCEEecccccc
Confidence 9999998421 1 3678888775 456666799999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHhhhceEEeeec-------C-C-C-cccHHHHHHHHHHHhc--ChhhHHHHHHHHHHHHHHHHHHhcCCCc
Q 012645 372 QPTNAKFVEEVWEVGVRAKKN-------R-A-G-IVTGEELNKCVNEVMD--GERSQKIKRNVSKWREFAKKAVSAGGSS 439 (459)
Q Consensus 372 Q~~na~rv~~~~G~G~~~~~~-------~-~-~-~~~~~~l~~~i~~ll~--~~~~~~~~~~a~~l~~~~~~~~~~~g~s 439 (459)
|+.||+++++.||+|+.+... + + + ..+.++|.++|+++|. +++++++|+||+++++.+++++.+||||
T Consensus 394 q~~na~~~~e~~~vGv~~~~~~~~~~~~~~~~~~~v~~eev~~~v~~~m~~~~eeg~~~R~rA~elk~~a~~Av~~GGSS 473 (491)
T PLN02534 394 QFLNEKLIVEVLRIGVRVGVEVPVRWGDEERVGVLVKKDEVEKAVKTLMDDGGEEGERRRRRAQELGVMARKAMELGGSS 473 (491)
T ss_pred HHHHHHHHHHhhcceEEecccccccccccccccCccCHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHhcCCCcH
Confidence 999999999888999987421 0 0 1 3799999999999997 4457799999999999999999999999
Q ss_pred HHHHHHHHHHHHHh
Q 012645 440 DKNIDEFVVRLLKA 453 (459)
Q Consensus 440 ~~~~~~~~~~l~~~ 453 (459)
...+++|+++|.+.
T Consensus 474 ~~nl~~fv~~i~~~ 487 (491)
T PLN02534 474 HINLSILIQDVLKQ 487 (491)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999754
|
|
| >PLN02208 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-59 Score=458.98 Aligned_cols=408 Identities=24% Similarity=0.409 Sum_probs=307.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCC-----CceEEEcC----CCCCCCCCCCCCCHHH
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHAT-----TVGVEPIS----DGFDEGGFKQAPSVKA 77 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~-----g~~~~~~~----~~~~~~~~~~~~~~~~ 77 (459)
++||+++|+++.||++|++.||+.|+++||+|||++++.+...++.. ++.+..++ ++++.+.. ....+..
T Consensus 4 ~~hvv~~P~paqGHi~P~l~LAk~La~~G~~VT~vtt~~~~~~i~~~~a~~~~i~~~~l~~p~~dgLp~g~~-~~~~l~~ 82 (442)
T PLN02208 4 KFHAFMFPWFAFGHMIPFLHLANKLAEKGHRVTFLLPKKAQKQLEHHNLFPDSIVFHPLTIPPVNGLPAGAE-TTSDIPI 82 (442)
T ss_pred CCEEEEecCccccHHHHHHHHHHHHHhCCCEEEEEeccchhhhhhcccCCCCceEEEEeCCCCccCCCCCcc-cccchhH
Confidence 48999999999999999999999999999999999999887766442 44565543 34444321 1112221
Q ss_pred H----HHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCC
Q 012645 78 Y----LESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPV 153 (459)
Q Consensus 78 ~----~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~ 153 (459)
. +........+.++++++++ ++|+||+| ++.|+..+|+++|||++.+++++++.+. +.+.+.....
T Consensus 83 ~l~~~~~~~~~~~~~~l~~~L~~~-----~~~cVV~D-~~~wa~~vA~e~giP~~~f~~~~a~~~~-~~~~~~~~~~--- 152 (442)
T PLN02208 83 SMDNLLSEALDLTRDQVEAAVRAL-----RPDLIFFD-FAQWIPEMAKEHMIKSVSYIIVSATTIA-HTHVPGGKLG--- 152 (442)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhC-----CCeEEEEC-CcHhHHHHHHHhCCCEEEEEhhhHHHHH-HHccCccccC---
Confidence 1 2222233444556555544 78999999 5789999999999999999999887543 3322211111
Q ss_pred CCCCCcccCCCCCC----CCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcC--CCeee
Q 012645 154 NQETVPLTLPGLPS----LASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGL--WPLVM 227 (459)
Q Consensus 154 ~~~~~~~~~p~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~ 227 (459)
..+|++|. +...+++.+ .. ..........+......+++++++|||.+||+...+.+... ++++.
T Consensus 153 ------~~~pglp~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~vl~Ntf~eLE~~~~~~~~~~~~~~v~~ 223 (442)
T PLN02208 153 ------VPPPGYPSSKVLFRENDAHAL-AT--LSIFYKRLYHQITTGLKSCDVIALRTCKEIEGKFCDYISRQYHKKVLL 223 (442)
T ss_pred ------CCCCCCCCcccccCHHHcCcc-cc--cchHHHHHHHHHHhhhccCCEEEEECHHHHHHHHHHHHHhhcCCCEEE
Confidence 12577763 334455543 11 11112222223334556789999999999999888887553 46999
Q ss_pred ecccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeC
Q 012645 228 IGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKE 307 (459)
Q Consensus 228 vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~ 307 (459)
|||+.... + ..+++++++.+||+.++++++|||||||+...+.+.+.+++.+++..+..++|+++.
T Consensus 224 vGpl~~~~------~--------~~~~~~~~~~~wLd~~~~~sVvyvSfGS~~~l~~~q~~e~~~~l~~s~~pf~wv~r~ 289 (442)
T PLN02208 224 TGPMFPEP------D--------TSKPLEEQWSHFLSGFPPKSVVFCSLGSQIILEKDQFQELCLGMELTGLPFLIAVKP 289 (442)
T ss_pred EeecccCc------C--------CCCCCHHHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEEeC
Confidence 99997541 0 012356789999999988899999999999888888888888888888889999885
Q ss_pred C----C--CCCchhhhhhcCC-CceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHH
Q 012645 308 N----E--NKLPVEFVNSVGE-TGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVE 380 (459)
Q Consensus 308 ~----~--~~~~~~~~~~~~~-~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~ 380 (459)
. . ..+|++|.+++.+ |+.+.+|+||.+||+|+++++|||||||||++||+++|||||++|++.||+.||++++
T Consensus 290 ~~~~~~~~~~lp~~f~~r~~~~g~~v~~W~PQ~~iL~H~~v~~FvtHcG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~ 369 (442)
T PLN02208 290 PRGSSTVQEGLPEGFEERVKGRGVVWGGWVQQPLILDHPSIGCFVNHCGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMT 369 (442)
T ss_pred CCcccchhhhCCHHHHHHHhcCCcEeeccCCHHHHhcCCccCeEEccCCchHHHHHHHcCCCEEecCcchhhHHHHHHHH
Confidence 3 1 3588899888764 5555599999999999999999999999999999999999999999999999999988
Q ss_pred HhhhceEEeeecCCCcccHHHHHHHHHHHhcCh--hhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Q 012645 381 EVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGE--RSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLLK 452 (459)
Q Consensus 381 ~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~--~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~~ 452 (459)
+.||+|+.+...+++.++.++|.++|+++|+++ .++.+|++++++++.+. ++|||..++++|++++.+
T Consensus 370 ~~~g~gv~~~~~~~~~~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~~~~~~~----~~gsS~~~l~~~v~~l~~ 439 (442)
T PLN02208 370 EEFEVSVEVSREKTGWFSKESLSNAIKSVMDKDSDLGKLVRSNHTKLKEILV----SPGLLTGYVDKFVEELQE 439 (442)
T ss_pred HHhceeEEeccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHh----cCCcHHHHHHHHHHHHHH
Confidence 744999999764111399999999999999874 36789999999999974 368999999999999865
|
|
| >PLN00414 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-58 Score=450.29 Aligned_cols=412 Identities=27% Similarity=0.421 Sum_probs=309.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCC-----CCceEEEcC----CCCCCCCCCCCCCH--
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHA-----TTVGVEPIS----DGFDEGGFKQAPSV-- 75 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~-----~g~~~~~~~----~~~~~~~~~~~~~~-- 75 (459)
+.||+++|+++.||++|++.||+.|+++|++|||++++.+...++. .++.|+.++ ++++.+. +...++
T Consensus 4 ~~HVvlvPfpaqGHi~PmL~LAk~Las~G~~VT~vtt~~~~~~i~~~~~~~~~i~~~~i~lP~~dGLP~g~-e~~~~l~~ 82 (446)
T PLN00414 4 KFHAFMYPWFGFGHMIPYLHLANKLAEKGHRVTFFLPKKAHKQLQPLNLFPDSIVFEPLTLPPVDGLPFGA-ETASDLPN 82 (446)
T ss_pred CCEEEEecCcccchHHHHHHHHHHHHhCCCEEEEEeCCchhhhhcccccCCCceEEEEecCCCcCCCCCcc-cccccchh
Confidence 4899999999999999999999999999999999999987665543 247775553 4555432 111111
Q ss_pred --HHHHHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCC
Q 012645 76 --KAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPV 153 (459)
Q Consensus 76 --~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~ 153 (459)
...+........+.++++++.. +||+||+|. +.|+..+|+++|||++.++++++..++.+.+.... .
T Consensus 83 ~~~~~~~~a~~~l~~~l~~~L~~~-----~p~cVV~D~-~~wa~~vA~~lgIP~~~F~~~~a~~~~~~~~~~~~-~---- 151 (446)
T PLN00414 83 STKKPIFDAMDLLRDQIEAKVRAL-----KPDLIFFDF-VHWVPEMAKEFGIKSVNYQIISAACVAMVLAPRAE-L---- 151 (446)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcC-----CCeEEEECC-chhHHHHHHHhCCCEEEEecHHHHHHHHHhCcHhh-c----
Confidence 1112222223344444444332 789999995 88999999999999999999998877776552210 0
Q ss_pred CCCCCcccCCCCCC----CCCCCC--CccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcC--CCe
Q 012645 154 NQETVPLTLPGLPS----LASSDL--PSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGL--WPL 225 (459)
Q Consensus 154 ~~~~~~~~~p~~~~----~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~ 225 (459)
+ ..+|++|. +...+. +.++.. ....+.+......+++++++|||.+||+...+.+.+. +++
T Consensus 152 ---~--~~~pg~p~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~v 220 (446)
T PLN00414 152 ---G--FPPPDYPLSKVALRGHDANVCSLFAN------SHELFGLITKGLKNCDVVSIRTCVELEGNLCDFIERQCQRKV 220 (446)
T ss_pred ---C--CCCCCCCCCcCcCchhhcccchhhcc------cHHHHHHHHHhhccCCEEEEechHHHHHHHHHHHHHhcCCCe
Confidence 0 12455552 111111 121211 1133444445566789999999999999999888663 359
Q ss_pred eeecccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEE
Q 012645 226 VMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVV 305 (459)
Q Consensus 226 ~~vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~ 305 (459)
+.|||+.+.. ... + + ....+++.+|||.++++++|||||||......+++.++..+|+..+.+|+|++
T Consensus 221 ~~VGPl~~~~----~~~-~---~----~~~~~~~~~WLD~q~~~sVvyvsfGS~~~~~~~q~~e~a~gL~~s~~~Flwvv 288 (446)
T PLN00414 221 LLTGPMLPEP----QNK-S---G----KPLEDRWNHWLNGFEPGSVVFCAFGTQFFFEKDQFQEFCLGMELTGLPFLIAV 288 (446)
T ss_pred EEEcccCCCc----ccc-c---C----cccHHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCeEEEE
Confidence 9999997541 000 0 0 11235688999999999999999999999999999999999999999999999
Q ss_pred eCCC------CCCchhhhhhcCCCceEE-eeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHH
Q 012645 306 KENE------NKLPVEFVNSVGETGLVV-RWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKF 378 (459)
Q Consensus 306 ~~~~------~~~~~~~~~~~~~~v~v~-~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~r 378 (459)
.... +.+|++|.+++.++..++ +|+||.+||+|+++++|||||||||++||+++|||||++|++.||+.||++
T Consensus 289 r~~~~~~~~~~~lp~~f~~r~~~~g~vv~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~ 368 (446)
T PLN00414 289 MPPKGSSTVQEALPEGFEERVKGRGIVWEGWVEQPLILSHPSVGCFVNHCGFGSMWESLVSDCQIVFIPQLADQVLITRL 368 (446)
T ss_pred ecCCCcccchhhCChhHHHHhcCCCeEEeccCCHHHHhcCCccceEEecCchhHHHHHHHcCCCEEecCcccchHHHHHH
Confidence 7631 368999999999888887 899999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhceEEeeecCCCcccHHHHHHHHHHHhcCh--hhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhcCC
Q 012645 379 VEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGE--RSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLLKADGK 456 (459)
Q Consensus 379 v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~--~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~~~~~~ 456 (459)
+++.||+|+.+....++.++.++|+++++++|.++ .++++|++++++++.+. ++||+| ..+++|++++.+..++
T Consensus 369 ~~~~~g~g~~~~~~~~~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~~~~~~---~~gg~s-s~l~~~v~~~~~~~~~ 444 (446)
T PLN00414 369 LTEELEVSVKVQREDSGWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKLKETLV---SPGLLS-GYADKFVEALENEVNN 444 (446)
T ss_pred HHHHhCeEEEeccccCCccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHH---cCCCcH-HHHHHHHHHHHHhccc
Confidence 97544999998643112489999999999999864 35679999999999974 466644 3389999999776655
Q ss_pred C
Q 012645 457 S 457 (459)
Q Consensus 457 ~ 457 (459)
+
T Consensus 445 ~ 445 (446)
T PLN00414 445 T 445 (446)
T ss_pred C
Confidence 3
|
|
| >PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-46 Score=372.68 Aligned_cols=402 Identities=17% Similarity=0.197 Sum_probs=275.1
Q ss_pred CcEEEEE-cCCCccCHHHHHHHHHHHHhCCCeEEEEecCcc--ccccCCCCceEEEcCC---CCCCCCCC-----C---C
Q 012645 7 RVHVLVL-TYPAQGHINPLLQFAKRLASKRVKATLATTHYT--VKSIHATTVGVEPISD---GFDEGGFK-----Q---A 72 (459)
Q Consensus 7 ~~kil~~-~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~--~~~~~~~g~~~~~~~~---~~~~~~~~-----~---~ 72 (459)
..||+.+ |.++.+|..-+.+|+++|++|||+||++++... .......+++.+.++. .+...... . .
T Consensus 20 ~~kIl~~~P~~~~SH~~~~~~l~~~La~rGH~VTvi~p~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (507)
T PHA03392 20 AARILAVFPTPAYSHHSVFKVYVEALAERGHNVTVIKPTLRVYYASHLCGNITEIDASLSVEYFKKLVKSSAVFRKRGVV 99 (507)
T ss_pred cccEEEEcCCCCCcHHHHHHHHHHHHHHcCCeEEEEecccccccccCCCCCEEEEEcCCChHHHHHHHhhhhHHHhhhhh
Confidence 3578766 778999999999999999999999999987542 1111235666666541 10000000 0 0
Q ss_pred CCHHHH----HHHHHHhchHHH--HHHHHHhhcCCCCccEEEeCCCchhHHHHHHHc-CCceEEEccchHHHHHHHHHhh
Q 012645 73 PSVKAY----LESFKTVGSRTL--AEVILKYKDSESPVNCIVYDSLLTWALDVARQF-GIYGAAMMTNSASVCSMYWQIN 145 (459)
Q Consensus 73 ~~~~~~----~~~~~~~~~~~~--~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~l-giP~v~~~~~~~~~~~~~~~~~ 145 (459)
.+.... ...+...++..+ .++.+.+..+..++|+||+|.+..++..+|+++ ++|.|.+++........ ..
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~kFDlvi~e~~~~c~~~la~~~~~~p~i~~ss~~~~~~~~---~~ 176 (507)
T PHA03392 100 ADSSTVTADNYMGLVRMISDQFDLPNVKNLIANKNNKFDLLVTEAFLDYPLVFSHLFGDAPVIQISSGYGLAENF---ET 176 (507)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHCCHHHHHHHhcCCCceeEEEecccchhHHHHHHHhCCCCEEEEcCCCCchhHH---Hh
Confidence 000000 011111111111 112233321234899999999988888899999 99998887755322211 11
Q ss_pred ccCCCCCCCCCCCcccCCCCCCCCCCCCCccccCCCCC--------------hHHHHHHHHHhhc-c-------cCCceE
Q 012645 146 HGLLTLPVNQETVPLTLPGLPSLASSDLPSFLAQPASN--------------PAYLAAILEQFGS-L-------NKNDWV 203 (459)
Q Consensus 146 ~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~-~-------~~~~~~ 203 (459)
.+..+.|. .++|.+. ....+.+.++.|.... ....+..++.+.. . .+.+..
T Consensus 177 ~gg~p~~~------syvP~~~-~~~~~~Msf~~R~~N~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~~~l~~~~~l~ 249 (507)
T PHA03392 177 MGAVSRHP------VYYPNLW-RSKFGNLNVWETINEIYTELRLYNEFSLLADEQNKLLKQQFGPDTPTIRELRNRVQLL 249 (507)
T ss_pred hccCCCCC------eeeCCcc-cCCCCCCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHcCCCCCCHHHHHhCCcEE
Confidence 12112222 2244433 3444566665553221 1111122222221 1 123467
Q ss_pred EEcchhHhhHHHHHHHhcC-CCeeeecccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCccc-
Q 012645 204 LCNSFEELEKELLRAMLGL-WPLVMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMAD- 281 (459)
Q Consensus 204 ~~~~~~~l~~~~~~~~~~~-~~~~~vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~- 281 (459)
++|+.+.++.+ .+. +++.++||+..+. ...+++++++.+|++.+ ++++|||||||+..
T Consensus 250 lvns~~~~d~~-----rp~~p~v~~vGgi~~~~--------------~~~~~l~~~l~~fl~~~-~~g~V~vS~GS~~~~ 309 (507)
T PHA03392 250 FVNVHPVFDNN-----RPVPPSVQYLGGLHLHK--------------KPPQPLDDYLEEFLNNS-TNGVVYVSFGSSIDT 309 (507)
T ss_pred EEecCccccCC-----CCCCCCeeeecccccCC--------------CCCCCCCHHHHHHHhcC-CCcEEEEECCCCCcC
Confidence 88888877753 222 3588899876531 11346788899999876 45799999999864
Q ss_pred --CCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhc
Q 012645 282 --IAANQVDEIARGLKASEKPFLWVVKENENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSL 359 (459)
Q Consensus 282 --~~~~~~~~i~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~ 359 (459)
.+.+.++.+++++++.+.++||+.+.. ..+ ...++||++.+|+||.+||+||.|++||||||+||++||+++
T Consensus 310 ~~~~~~~~~~~l~a~~~l~~~viw~~~~~--~~~----~~~p~Nv~i~~w~Pq~~lL~hp~v~~fItHGG~~s~~Eal~~ 383 (507)
T PHA03392 310 NDMDNEFLQMLLRTFKKLPYNVLWKYDGE--VEA----INLPANVLTQKWFPQRAVLKHKNVKAFVTQGGVQSTDEAIDA 383 (507)
T ss_pred CCCCHHHHHHHHHHHHhCCCeEEEEECCC--cCc----ccCCCceEEecCCCHHHHhcCCCCCEEEecCCcccHHHHHHc
Confidence 467899999999999999999998742 111 135789999999999999999999999999999999999999
Q ss_pred CCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCc
Q 012645 360 GVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSS 439 (459)
Q Consensus 360 GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s 439 (459)
|||||++|++.||+.||+|++++ |+|+.++.. .+++++|.++|+++++|+ +|++||+++++.+++. .-+.
T Consensus 384 GvP~v~iP~~~DQ~~Na~rv~~~-G~G~~l~~~---~~t~~~l~~ai~~vl~~~---~y~~~a~~ls~~~~~~---p~~~ 453 (507)
T PHA03392 384 LVPMVGLPMMGDQFYNTNKYVEL-GIGRALDTV---TVSAAQLVLAIVDVIENP---KYRKNLKELRHLIRHQ---PMTP 453 (507)
T ss_pred CCCEEECCCCccHHHHHHHHHHc-CcEEEeccC---CcCHHHHHHHHHHHhCCH---HHHHHHHHHHHHHHhC---CCCH
Confidence 99999999999999999999999 999999987 899999999999999998 9999999999999862 2234
Q ss_pred HHHHHHHHHHHHHhc
Q 012645 440 DKNIDEFVVRLLKAD 454 (459)
Q Consensus 440 ~~~~~~~~~~l~~~~ 454 (459)
.+.+..-++.+.++.
T Consensus 454 ~~~av~~iE~v~r~~ 468 (507)
T PHA03392 454 LHKAIWYTEHVIRNK 468 (507)
T ss_pred HHHHHHHHHHHHhCC
Confidence 555666777776654
|
|
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-45 Score=357.84 Aligned_cols=372 Identities=20% Similarity=0.276 Sum_probs=256.4
Q ss_pred EcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcCCCCCCCCCC-C--CCCHHHHHHHHHHhchHH
Q 012645 13 LTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDEGGFK-Q--APSVKAYLESFKTVGSRT 89 (459)
Q Consensus 13 ~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~ 89 (459)
+.+|+.||++|++.||++|+++||+|+|++++.+.+.+++.|+.|++++......... . ..+.......+.......
T Consensus 1 ~~~p~~Ghv~P~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (392)
T TIGR01426 1 FNIPAHGHVNPTLGVVEELVARGHRVTYATTEEFAERVEAAGAEFVLYGSALPPPDNPPENTEEEPIDIIEKLLDEAEDV 80 (392)
T ss_pred CCCCccccccccHHHHHHHHhCCCeEEEEeCHHHHHHHHHcCCEEEecCCcCccccccccccCcchHHHHHHHHHHHHHH
Confidence 3679999999999999999999999999999999999999999999998654331110 0 023344444444444455
Q ss_pred HHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCcccCCCCCCCC
Q 012645 90 LAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPGLPSLA 169 (459)
Q Consensus 90 ~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~ 169 (459)
+..+.+.+... +||+||+|.+++++..+|+++|||+|.+++.+... ...+ .+ .| +..
T Consensus 81 ~~~l~~~~~~~--~pDlVi~d~~~~~~~~~A~~~giP~v~~~~~~~~~----~~~~-----~~---------~~---~~~ 137 (392)
T TIGR01426 81 LPQLEEAYKGD--RPDLIVYDIASWTGRLLARKWDVPVISSFPTFAAN----EEFE-----EM---------VS---PAG 137 (392)
T ss_pred HHHHHHHhcCC--CCCEEEECCccHHHHHHHHHhCCCEEEEehhhccc----cccc-----cc---------cc---ccc
Confidence 55555544433 89999999988899999999999999986543100 0000 00 00 000
Q ss_pred CCC--CCccccCCCCChHHHHHHHHHhh--ccc----------CCceEEEcchhHhhHHHHHHHhcC-CCeeeecccCCC
Q 012645 170 SSD--LPSFLAQPASNPAYLAAILEQFG--SLN----------KNDWVLCNSFEELEKELLRAMLGL-WPLVMIGPLVPS 234 (459)
Q Consensus 170 ~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~----------~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~vgp~~~~ 234 (459)
... ......+ ....+.+.+.+... .+. ..+..+..+.+.+.++. ... .+++++||+...
T Consensus 138 ~~~~~~~~~~~~--~~~~~~~~~~~~r~~~gl~~~~~~~~~~~~~~~~l~~~~~~l~~~~----~~~~~~~~~~Gp~~~~ 211 (392)
T TIGR01426 138 EGSAEEGAIAER--GLAEYVARLSALLEEHGITTPPVEFLAAPRRDLNLVYTPKAFQPAG----ETFDDSFTFVGPCIGD 211 (392)
T ss_pred hhhhhhhccccc--hhHHHHHHHHHHHHHhCCCCCCHHHHhcCCcCcEEEeCChHhCCCc----cccCCCeEEECCCCCC
Confidence 000 0000000 00111111111111 110 11123444444444321 112 248899997654
Q ss_pred ccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCch
Q 012645 235 AYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENENKLPV 314 (459)
Q Consensus 235 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~~~~~~ 314 (459)
. .+...|....+++++||||+||+.......+..+++++...+.+++|..+... ...
T Consensus 212 ~---------------------~~~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~g~~~--~~~ 268 (392)
T TIGR01426 212 R---------------------KEDGSWERPGDGRPVVLISLGTVFNNQPSFYRTCVEAFRDLDWHVVLSVGRGV--DPA 268 (392)
T ss_pred c---------------------cccCCCCCCCCCCCEEEEecCccCCCCHHHHHHHHHHHhcCCCeEEEEECCCC--Chh
Confidence 1 01223555556788999999998766667888999999999999998876531 111
Q ss_pred hhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCC
Q 012645 315 EFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRA 394 (459)
Q Consensus 315 ~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~ 394 (459)
.+ ...++|+.+.+|+|+.++|+++++ +|||||+||++||+++|||+|++|...||+.||.+++++ |+|..+...
T Consensus 269 ~~-~~~~~~v~~~~~~p~~~ll~~~~~--~I~hgG~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~-g~g~~l~~~-- 342 (392)
T TIGR01426 269 DL-GELPPNVEVRQWVPQLEILKKADA--FITHGGMNSTMEALFNGVPMVAVPQGADQPMTARRIAEL-GLGRHLPPE-- 342 (392)
T ss_pred Hh-ccCCCCeEEeCCCCHHHHHhhCCE--EEECCCchHHHHHHHhCCCEEecCCcccHHHHHHHHHHC-CCEEEeccc--
Confidence 22 135689999999999999988777 999999999999999999999999999999999999999 999999877
Q ss_pred CcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012645 395 GIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLL 451 (459)
Q Consensus 395 ~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~ 451 (459)
.++++.|.++|+++|+|+ +|+++++++++.+.+. ++ .+.+.++|+++.
T Consensus 343 -~~~~~~l~~ai~~~l~~~---~~~~~~~~l~~~~~~~----~~-~~~aa~~i~~~~ 390 (392)
T TIGR01426 343 -EVTAEKLREAVLAVLSDP---RYAERLRKMRAEIREA----GG-ARRAADEIEGFL 390 (392)
T ss_pred -cCCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHc----CC-HHHHHHHHHHhh
Confidence 899999999999999998 9999999999999862 33 345555555543
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-44 Score=357.35 Aligned_cols=375 Identities=18% Similarity=0.166 Sum_probs=246.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcCCCCCCCCCC----------CCCCHHH
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDEGGFK----------QAPSVKA 77 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~----------~~~~~~~ 77 (459)
|||+|+++|+.||++|+++||++|+++||+|+|++++.++..+++.|++|+++++........ .......
T Consensus 1 mrIl~~~~p~~GHv~P~l~la~~L~~rGh~V~~~t~~~~~~~v~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (401)
T cd03784 1 MRVLITTIGSRGDVQPLVALAWALRAAGHEVRVATPPEFADLVEAAGLEFVPVGGDPDELLASPERNAGLLLLGPGLLLG 80 (401)
T ss_pred CeEEEEeCCCcchHHHHHHHHHHHHHCCCeEEEeeCHhHHHHHHHcCCceeeCCCCHHHHHhhhhhcccccccchHHHHH
Confidence 899999999999999999999999999999999999999999999999999997543221000 0111222
Q ss_pred HHHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCC
Q 012645 78 YLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQET 157 (459)
Q Consensus 78 ~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 157 (459)
....+.......++.+++.+... +||+||+|.+.+++..+|+++|||++.+++++..... .
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~--~pDlvi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~--------~--------- 141 (401)
T cd03784 81 ALRLLRREAEAMLDDLVAAARDW--GPDLVVADPLAFAGAVAAEALGIPAVRLLLGPDTPTS--------A--------- 141 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHhccc--CCCEEEeCcHHHHHHHHHHHhCCCeEEeecccCCccc--------c---------
Confidence 33334444555566666655433 8999999998888999999999999999876521100 0
Q ss_pred CcccCCCCCCCCCCC--CCccccCCCCChHHHHHHHHHhh--cccC-------CceEEEcchhHhhHHHHHHHhcCC-Ce
Q 012645 158 VPLTLPGLPSLASSD--LPSFLAQPASNPAYLAAILEQFG--SLNK-------NDWVLCNSFEELEKELLRAMLGLW-PL 225 (459)
Q Consensus 158 ~~~~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~~-------~~~~~~~~~~~l~~~~~~~~~~~~-~~ 225 (459)
.| |+..... ...................+... .+.. .+..+....+.+.+ ..++.+ ..
T Consensus 142 ----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 211 (401)
T cd03784 142 ----FP--PPLGRANLRLYALLEAELWQDLLGAWLRARRRRLGLPPLSLLDGSDVPELYGFSPAVLP----PPPDWPRFD 211 (401)
T ss_pred ----CC--CccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCCcEEEecCcccCC----CCCCccccC
Confidence 00 0010000 00000000000000011111111 1110 00111111111000 001111 12
Q ss_pred eeec-ccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCccc-CCHHHHHHHHHHHHhCCCcEEE
Q 012645 226 VMIG-PLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMAD-IAANQVDEIARGLKASEKPFLW 303 (459)
Q Consensus 226 ~~vg-p~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~-~~~~~~~~i~~a~~~~~~~~v~ 303 (459)
.++| ++... ......++++..|++. ++++|||++||+.. .....+..++++++..+.++||
T Consensus 212 ~~~g~~~~~~---------------~~~~~~~~~~~~~~~~--~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~~~~~i~ 274 (401)
T cd03784 212 LVTGYGFRDV---------------PYNGPPPPELWLFLAA--GRPPVYVGFGSMVVRDPEALARLDVEAVATLGQRAIL 274 (401)
T ss_pred cEeCCCCCCC---------------CCCCCCCHHHHHHHhC--CCCcEEEeCCCCcccCHHHHHHHHHHHHHHcCCeEEE
Confidence 2332 11111 0011235567888875 46699999999976 3456778899999999999999
Q ss_pred EEeCCCCCCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhh
Q 012645 304 VVKENENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVW 383 (459)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~ 383 (459)
+++.... .. ...++|+++.+|+||.++|+++++ ||||||+||++||+++|||+|++|+..||+.||++++++
T Consensus 275 ~~g~~~~--~~---~~~~~~v~~~~~~p~~~ll~~~d~--~I~hgG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~- 346 (401)
T cd03784 275 SLGWGGL--GA---EDLPDNVRVVDFVPHDWLLPRCAA--VVHHGGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAEL- 346 (401)
T ss_pred EccCccc--cc---cCCCCceEEeCCCCHHHHhhhhhe--eeecCCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHC-
Confidence 8876421 11 135789999999999999977666 999999999999999999999999999999999999999
Q ss_pred hceEEeeecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHH
Q 012645 384 EVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVV 448 (459)
Q Consensus 384 G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~ 448 (459)
|+|..+... .+++++|.+++++++++ .++++++++++.+++ ......+.++|+
T Consensus 347 G~g~~l~~~---~~~~~~l~~al~~~l~~----~~~~~~~~~~~~~~~-----~~g~~~~~~~ie 399 (401)
T cd03784 347 GAGPALDPR---ELTAERLAAALRRLLDP----PSRRRAAALLRRIRE-----EDGVPSAADVIE 399 (401)
T ss_pred CCCCCCCcc---cCCHHHHHHHHHHHhCH----HHHHHHHHHHHHHHh-----ccCHHHHHHHHh
Confidence 999999887 78999999999999996 556677777777754 222445555554
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-46 Score=377.46 Aligned_cols=408 Identities=25% Similarity=0.333 Sum_probs=223.0
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCcccccc--CCCCceEEEcCCCCCCCCCCC-CCCH-HHH------
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSI--HATTVGVEPISDGFDEGGFKQ-APSV-KAY------ 78 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~--~~~g~~~~~~~~~~~~~~~~~-~~~~-~~~------ 78 (459)
|||++|. +.||+.++..|+++|++|||+||++++......- ...+++++.++.......... .... ...
T Consensus 2 kvLv~p~-~~SH~~~~~~l~~~L~~rGH~VTvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (500)
T PF00201_consen 2 KVLVFPM-AYSHFIFMRPLAEELAERGHNVTVLTPSPSSSLNPSKPSNIRFETYPDPYPEEEFEEIFPEFISKFFSESSF 80 (500)
T ss_dssp -----------SHHHHHHHHHHHHHH-TTSEEEHHHHHHT------S-CCEEEE-----TT------TTHHHHHHHHHCC
T ss_pred EEEEeCC-CcCHHHHHHHHHHHHHhcCCceEEEEeecccccccccccceeeEEEcCCcchHHHhhhhHHHHHHHhhhccc
Confidence 6788885 7899999999999999999999999886532221 234677777765444322111 1111 000
Q ss_pred -------HHHH---HHhchHHH------HHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHH
Q 012645 79 -------LESF---KTVGSRTL------AEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYW 142 (459)
Q Consensus 79 -------~~~~---~~~~~~~~------~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~ 142 (459)
+... .......+ .++++.++.. ++|++|+|.+..|+..+|+.+|+|.+.+.+.....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~C~~~l~d~~l~~~l~~~--~fDlvI~d~f~~c~~~la~~l~iP~i~~~s~~~~~----- 153 (500)
T PF00201_consen 81 ANSFWEMFKMLNAFFDFFSKSCEDLLSDPELMEQLKSE--KFDLVISDAFDPCGLALAHYLGIPVIIISSSTPMY----- 153 (500)
T ss_dssp HHHHHHHHHHHHCHHHS----E--EEEETTSTTHHHHH--HHCT-EEEEEESSHHHHHHHHHHTHHHHHHCCSCS-----
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhh--ccccceEeeccchhHHHHHHhcCCeEEEecccccc-----
Confidence 0000 00001111 1111222222 78999999999989999999999998754322100
Q ss_pred HhhccCC-CCCCCCCCCcccCCCCCCCCCCCCCccccCCCCChH--HHHHHHHHhhcccCCceEEEc----chhHhhHHH
Q 012645 143 QINHGLL-TLPVNQETVPLTLPGLPSLASSDLPSFLAQPASNPA--YLAAILEQFGSLNKNDWVLCN----SFEELEKEL 215 (459)
Q Consensus 143 ~~~~~~~-~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~ 215 (459)
...... ..|. .+..+|... ....+.+.++.|...... ......+.............. +..++....
T Consensus 154 -~~~~~~~g~p~----~psyvP~~~-s~~~~~msf~~Ri~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (500)
T PF00201_consen 154 -DLSSFSGGVPS----PPSYVPSMF-SDFSDRMSFWQRIKNFLFYLYFRFIFRYFFSPQDKLYKKYFGFPFSFRELLSNA 227 (500)
T ss_dssp -CCTCCTSCCCT----STTSTTCBC-CCSGTTSSSST--TTSHHHHHHHHHHHHGGGS-TTS-EEESS-GGGCHHHHHHH
T ss_pred -hhhhhccCCCC----ChHHhcccc-ccCCCccchhhhhhhhhhhhhhccccccchhhHHHHHhhhcccccccHHHHHHH
Confidence 000000 0111 111233321 233455556655433321 112222222111011111111 111221111
Q ss_pred HHHHhc-CCCeeeecccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccC-CHHHHHHHHHH
Q 012645 216 LRAMLG-LWPLVMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADI-AANQVDEIARG 293 (459)
Q Consensus 216 ~~~~~~-~~~~~~vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~-~~~~~~~i~~a 293 (459)
...+-+ .+.+.+.+|+.+...+.|+...+ ..+++++++..|++...++++|||||||+... +.+..+.++++
T Consensus 228 ~l~l~ns~~~ld~prp~~p~v~~vGgl~~~------~~~~l~~~~~~~~~~~~~~~vv~vsfGs~~~~~~~~~~~~~~~~ 301 (500)
T PF00201_consen 228 SLVLINSHPSLDFPRPLLPNVVEVGGLHIK------PAKPLPEELWNFLDSSGKKGVVYVSFGSIVSSMPEEKLKEIAEA 301 (500)
T ss_dssp HHCCSSTEEE----HHHHCTSTTGCGC-S----------TCHHHHHHHTSTTTTTEEEEEE-TSSSTT-HHHHHHHHHHH
T ss_pred HHHhhhccccCcCCcchhhcccccCccccc------cccccccccchhhhccCCCCEEEEecCcccchhHHHHHHHHHHH
Confidence 111111 12244445555555444443321 24577899999999855788999999998764 44457889999
Q ss_pred HHhCCCcEEEEEeCCCCCCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchh
Q 012645 294 LKASEKPFLWVVKENENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQP 373 (459)
Q Consensus 294 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~ 373 (459)
+++++.+|||+.... .+. ..++|+++.+|+||.+||+||++++||||||+||+.||+++|||+|++|+++||+
T Consensus 302 ~~~~~~~~iW~~~~~---~~~----~l~~n~~~~~W~PQ~~lL~hp~v~~fitHgG~~s~~Ea~~~gvP~l~~P~~~DQ~ 374 (500)
T PF00201_consen 302 FENLPQRFIWKYEGE---PPE----NLPKNVLIVKWLPQNDLLAHPRVKLFITHGGLNSTQEALYHGVPMLGIPLFGDQP 374 (500)
T ss_dssp HHCSTTEEEEEETCS---HGC----HHHTTEEEESS--HHHHHTSTTEEEEEES--HHHHHHHHHCT--EEE-GCSTTHH
T ss_pred HhhCCCccccccccc---ccc----cccceEEEeccccchhhhhcccceeeeeccccchhhhhhhccCCccCCCCcccCC
Confidence 999999999999641 111 2568999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Q 012645 374 TNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLLKA 453 (459)
Q Consensus 374 ~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~~~ 453 (459)
.||+++++. |+|+.++.. .+|.++|.++|+++|+|+ +|++||+++++.+++. . -+..+.+..-+|.+.++
T Consensus 375 ~na~~~~~~-G~g~~l~~~---~~~~~~l~~ai~~vl~~~---~y~~~a~~ls~~~~~~--p-~~p~~~~~~~ie~v~~~ 444 (500)
T PF00201_consen 375 RNAARVEEK-GVGVVLDKN---DLTEEELRAAIREVLENP---SYKENAKRLSSLFRDR--P-ISPLERAVWWIEYVARH 444 (500)
T ss_dssp HHHHHHHHT-TSEEEEGGG---C-SHHHHHHHHHHHHHSH---HHHHHHHHHHHTTT-----------------------
T ss_pred ccceEEEEE-eeEEEEEec---CCcHHHHHHHHHHHHhhh---HHHHHHHHHHHHHhcC--C-CCHHHHHHHHHHHHHhc
Confidence 999999999 999999998 899999999999999998 9999999999999862 1 22334444445555443
|
This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A .... |
| >COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-43 Score=341.67 Aligned_cols=396 Identities=19% Similarity=0.249 Sum_probs=247.1
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcCCC-CCCCCCCCCCCHHHHHHHHHHh
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDG-FDEGGFKQAPSVKAYLESFKTV 85 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 85 (459)
+|||+|+..|++||++|+++||++|+++||+|+|++++.+++.+++.|+.|..++.. .............+.+......
T Consensus 1 ~mkil~~~~~~~Ghv~p~~aL~~eL~~~gheV~~~~~~~~~~~ve~ag~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (406)
T COG1819 1 RMKILFVVCGAYGHVNPCLALGKELRRRGHEVVFASTGKFKEFVEAAGLAFVAYPIRDSELATEDGKFAGVKSFRRLLQQ 80 (406)
T ss_pred CceEEEEeccccccccchHHHHHHHHhcCCeEEEEeCHHHHHHHHHhCcceeeccccCChhhhhhhhhhccchhHHHhhh
Confidence 599999999999999999999999999999999999999999999999888888743 1111111111111111101112
Q ss_pred chHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCcccCCCC
Q 012645 86 GSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPGL 165 (459)
Q Consensus 86 ~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~p~~ 165 (459)
....+.++++-+.+. .+|+|+.|.....+ .+++..++|++.......+.. +....+.+..........+..
T Consensus 81 ~~~~~~~~~~~~~e~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~ 151 (406)
T COG1819 81 FKKLIRELLELLREL--EPDLVVDDARLSLG-LAARLLGIPVVGINVAPYTPL------PAAGLPLPPVGIAGKLPIPLY 151 (406)
T ss_pred hhhhhHHHHHHHHhc--chhhhhcchhhhhh-hhhhhcccchhhhhhhhccCC------cccccCccccccccccccccc
Confidence 222233333333333 78999999665544 889999999998766542211 111111111110000011111
Q ss_pred CCCCCCCCCccccCCCCChHH-HHHHHHHhhcccCCc---eEEEcchhHhhHHHHHHHhcC-CCeeeecccCCCcccccc
Q 012645 166 PSLASSDLPSFLAQPASNPAY-LAAILEQFGSLNKND---WVLCNSFEELEKELLRAMLGL-WPLVMIGPLVPSAYLDQQ 240 (459)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~-~~~~~vgp~~~~~~~~~~ 240 (459)
+ .......+. .....+ .....+....+.... ..+..+-+.++....+..... ....++++.+.+.
T Consensus 152 ~-~~~~~~~~~----~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~----- 221 (406)
T COG1819 152 P-LPPRLVRPL----IFARSWLPKLVVRRNLGLELGLPNIRRLFASGPLLEIAYTDVLFPPGDRLPFIGPYIGPL----- 221 (406)
T ss_pred c-cChhhcccc----ccchhhhhhhhhhhhccccccccchHHHhcCCCCccccccccccCCCCCCCCCcCccccc-----
Confidence 0 000000000 000000 011111111110000 000000000000000000000 0011111111110
Q ss_pred ccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhc
Q 012645 241 IAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENENKLPVEFVNSV 320 (459)
Q Consensus 241 ~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~ 320 (459)
......++..|+. .++++||+|+||+... .++++.+++++..++.++|+.... . .. . ....
T Consensus 222 -----------~~~~~~~~~~~~~--~d~~~vyvslGt~~~~-~~l~~~~~~a~~~l~~~vi~~~~~-~-~~-~--~~~~ 282 (406)
T COG1819 222 -----------LGEAANELPYWIP--ADRPIVYVSLGTVGNA-VELLAIVLEALADLDVRVIVSLGG-A-RD-T--LVNV 282 (406)
T ss_pred -----------cccccccCcchhc--CCCCeEEEEcCCcccH-HHHHHHHHHHHhcCCcEEEEeccc-c-cc-c--cccC
Confidence 0111223334433 3567999999999876 899999999999999999998864 1 11 1 1136
Q ss_pred CCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHH
Q 012645 321 GETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGE 400 (459)
Q Consensus 321 ~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~ 400 (459)
++|+++.+|+||.++|+++++ ||||||+||++|||++|||+|++|...||++||.|++++ |+|..+..+ .++++
T Consensus 283 p~n~~v~~~~p~~~~l~~ad~--vI~hGG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~-G~G~~l~~~---~l~~~ 356 (406)
T COG1819 283 PDNVIVADYVPQLELLPRADA--VIHHGGAGTTSEALYAGVPLVVIPDGADQPLNAERVEEL-GAGIALPFE---ELTEE 356 (406)
T ss_pred CCceEEecCCCHHHHhhhcCE--EEecCCcchHHHHHHcCCCEEEecCCcchhHHHHHHHHc-CCceecCcc---cCCHH
Confidence 789999999999999977777 999999999999999999999999999999999999999 999999998 89999
Q ss_pred HHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhc
Q 012645 401 ELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLLKAD 454 (459)
Q Consensus 401 ~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~~~~ 454 (459)
.|+++|+++|+|+ .|+++++++++.++++ +| ...+.++|++..+..
T Consensus 357 ~l~~av~~vL~~~---~~~~~~~~~~~~~~~~---~g--~~~~a~~le~~~~~~ 402 (406)
T COG1819 357 RLRAAVNEVLADD---SYRRAAERLAEEFKEE---DG--PAKAADLLEEFAREK 402 (406)
T ss_pred HHHHHHHHHhcCH---HHHHHHHHHHHHhhhc---cc--HHHHHHHHHHHHhcc
Confidence 9999999999998 9999999999999973 23 666777777765543
|
|
| >KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=330.30 Aligned_cols=389 Identities=28% Similarity=0.395 Sum_probs=245.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCC-CC-----------ceEEEcCCCCCCCCCCCCCC
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHA-TT-----------VGVEPISDGFDEGGFKQAPS 74 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~-~g-----------~~~~~~~~~~~~~~~~~~~~ 74 (459)
+.+++++++|+.||++|+..+|+.|+++||+||++.+......... .. ..+...++.++.........
T Consensus 5 ~~~~il~~~p~~sH~~~~~~la~~L~~~gh~vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (496)
T KOG1192|consen 5 KAHNILVPFPGQSHLNPMLQLAKRLAERGHNVTVVTPSFNALKLSKSSKSKSIKKINPPPFEFLTIPDGLPEGWEDDDLD 84 (496)
T ss_pred cceeEEEECCcccHHHHHHHHHHHHHHcCCceEEEEeechhcccCCcccceeeeeeecChHHhhhhhhhhccchHHHHHH
Confidence 4578888889999999999999999999999999999876554433 11 11111111111111000000
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhhc-CCCCccEEEeCCCchhHHHHHHHcC-CceEEEccchHHHHHHHHHhhccCCCCC
Q 012645 75 VKAYLESFKTVGSRTLAEVILKYKD-SESPVNCIVYDSLLTWALDVARQFG-IYGAAMMTNSASVCSMYWQINHGLLTLP 152 (459)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~Dlvi~D~~~~~~~~~a~~lg-iP~v~~~~~~~~~~~~~~~~~~~~~~~p 152 (459)
.......+...+...+.+....+.. ...++|++|+|.+..+...++...+ ++...+............+.....
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~~~~~~~---- 160 (496)
T KOG1192|consen 85 ISESLLELNKTCEDLLRDPLEKLLLLKSEKFDLIISDPFLGLFLLLAIPSFVIPLLSFPTSSAVLLALGLPSPLSY---- 160 (496)
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHhhcCCccEEEechhhHHHHHhcccceEEEeecccCchHHHHhcCCcCcccc----
Confidence 1111223333334444443333332 2124999999998766777776664 888888776654443322222111
Q ss_pred CCCCCCcccCCCCCCCCCCCCCccccCCCCCh-H--------------HHHHHHHHhhccc----CCceEEEcc-hhHhh
Q 012645 153 VNQETVPLTLPGLPSLASSDLPSFLAQPASNP-A--------------YLAAILEQFGSLN----KNDWVLCNS-FEELE 212 (459)
Q Consensus 153 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~--------------~~~~~~~~~~~~~----~~~~~~~~~-~~~l~ 212 (459)
+|........+.+.+..+..... . ............. .....+.++ +..++
T Consensus 161 ---------~p~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ln 231 (496)
T KOG1192|consen 161 ---------VPSPFSLSSGDDMSFPERVPNLIKKDLPSFLFSLSDDRKQDKISKELLGDILNWKPTASGIIVNASFIFLN 231 (496)
T ss_pred ---------cCcccCccccccCcHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCCcccccccHHHhhhcCeEEEEc
Confidence 11111000001122221111000 0 0011111111111 111223333 44444
Q ss_pred HHHHHHHhc---CCCeeeecccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCC--cEEEEEeCCcc---cCCH
Q 012645 213 KELLRAMLG---LWPLVMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEK--SVIYVSFGSMA---DIAA 284 (459)
Q Consensus 213 ~~~~~~~~~---~~~~~~vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~--~~V~vs~Gs~~---~~~~ 284 (459)
......+.. .++++++||+..... ..+.++ ..+|++..+.. ++|||||||+. ..+.
T Consensus 232 ~~~~~~~~~~~~~~~v~~IG~l~~~~~-------------~~~~~~---~~~wl~~~~~~~~~vvyvSfGS~~~~~~lp~ 295 (496)
T KOG1192|consen 232 SNPLLDFEPRPLLPKVIPIGPLHVKDS-------------KQKSPL---PLEWLDILDESRHSVVYISFGSMVNSADLPE 295 (496)
T ss_pred cCcccCCCCCCCCCCceEECcEEecCc-------------cccccc---cHHHHHHHhhccCCeEEEECCcccccccCCH
Confidence 333222211 346999999876510 001112 34455544443 79999999998 6899
Q ss_pred HHHHHHHHHHHhC-CCcEEEEEeCCC-CCCchhhhhhcCCCceEEeeecHHHH-hcccCccceeccCchhhHHHhhhcCC
Q 012645 285 NQVDEIARGLKAS-EKPFLWVVKENE-NKLPVEFVNSVGETGLVVRWCNQFEV-LAHQAVGCFITHCGWNSILEGLSLGV 361 (459)
Q Consensus 285 ~~~~~i~~a~~~~-~~~~v~~~~~~~-~~~~~~~~~~~~~~v~v~~~~p~~~l-L~~~~~~~~I~HGG~gs~~eal~~Gv 361 (459)
+....++.+++.. +..|+|+..... ..+++++.++.++||...+|+||.++ |.|+.+++||||||+||++|++++||
T Consensus 296 ~~~~~l~~~l~~~~~~~FiW~~~~~~~~~~~~~~~~~~~~nV~~~~W~PQ~~lll~H~~v~~FvTHgG~nSt~E~~~~Gv 375 (496)
T KOG1192|consen 296 EQKKELAKALESLQGVTFLWKYRPDDSIYFPEGLPNRGRGNVVLSKWAPQNDLLLDHPAVGGFVTHGGWNSTLESIYSGV 375 (496)
T ss_pred HHHHHHHHHHHhCCCceEEEEecCCcchhhhhcCCCCCcCceEEecCCCcHHHhcCCCcCcEEEECCcccHHHHHHhcCC
Confidence 9999999999999 888999998753 22344444333578999999999998 59999999999999999999999999
Q ss_pred eeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHH
Q 012645 362 AVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKK 431 (459)
Q Consensus 362 P~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~ 431 (459)
|+|++|+++||+.||+++++. |.|..+... +.+...+.+++.++++++ +|+++++++++..++
T Consensus 376 P~v~~Plf~DQ~~Na~~i~~~-g~~~v~~~~---~~~~~~~~~~~~~il~~~---~y~~~~~~l~~~~~~ 438 (496)
T KOG1192|consen 376 PMVCVPLFGDQPLNARLLVRH-GGGGVLDKR---DLVSEELLEAIKEILENE---EYKEAAKRLSEILRD 438 (496)
T ss_pred ceecCCccccchhHHHHHHhC-CCEEEEehh---hcCcHHHHHHHHHHHcCh---HHHHHHHHHHHHHHc
Confidence 999999999999999999999 878778777 677766999999999998 999999999998874
|
|
| >PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.5e-27 Score=224.19 Aligned_cols=319 Identities=18% Similarity=0.161 Sum_probs=204.0
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCcccc--ccCCCCceEEEcCCCCCCCCCCCCCCHHHHHHHHHHhc
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVK--SIHATTVGVEPISDGFDEGGFKQAPSVKAYLESFKTVG 86 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (459)
||+|.+.||.||++|.+++|++|.++||+|.|++.....+ .+.+.|+.++.++.. . ...... ...+.......
T Consensus 3 ~i~~~~GGTGGHi~Pala~a~~l~~~g~~v~~vg~~~~~e~~l~~~~g~~~~~~~~~---~-l~~~~~-~~~~~~~~~~~ 77 (352)
T PRK12446 3 KIVFTGGGSAGHVTPNLAIIPYLKEDNWDISYIGSHQGIEKTIIEKENIPYYSISSG---K-LRRYFD-LKNIKDPFLVM 77 (352)
T ss_pred eEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEECCCccccccCcccCCcEEEEecc---C-cCCCch-HHHHHHHHHHH
Confidence 6899999999999999999999999999999999776543 345568988888621 1 111111 22233332222
Q ss_pred hHH--HHHHHHHhhcCCCCccEEEeCCCch--hHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCcccC
Q 012645 87 SRT--LAEVILKYKDSESPVNCIVYDSLLT--WALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTL 162 (459)
Q Consensus 87 ~~~--~~~l~~~~~~~~~~~Dlvi~D~~~~--~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 162 (459)
... ...+++++ +||+||....+. .+..+|+.+++|++....+. +
T Consensus 78 ~~~~~~~~i~~~~-----kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~n~---------------------------~ 125 (352)
T PRK12446 78 KGVMDAYVRIRKL-----KPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESDM---------------------------T 125 (352)
T ss_pred HHHHHHHHHHHhc-----CCCEEEecCchhhHHHHHHHHHcCCCEEEECCCC---------------------------C
Confidence 222 22344544 899999876443 36889999999999876543 2
Q ss_pred CCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcCCCeeeecccCCCcccccccc
Q 012645 163 PGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAYLDQQIA 242 (459)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vgp~~~~~~~~~~~~ 242 (459)
|++ ..+.+.+.. +.+ +.+|++- ...++. .++.++|+.+.+...
T Consensus 126 ~g~--------------------~nr~~~~~a------~~v-~~~f~~~----~~~~~~-~k~~~tG~Pvr~~~~----- 168 (352)
T PRK12446 126 PGL--------------------ANKIALRFA------SKI-FVTFEEA----AKHLPK-EKVIYTGSPVREEVL----- 168 (352)
T ss_pred ccH--------------------HHHHHHHhh------CEE-EEEccch----hhhCCC-CCeEEECCcCCcccc-----
Confidence 221 112222222 111 2223221 111221 257889976655211
Q ss_pred CCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCH-HHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhcC
Q 012645 243 GDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAA-NQVDEIARGLKASEKPFLWVVKENENKLPVEFVNSVG 321 (459)
Q Consensus 243 ~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~-~~~~~i~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 321 (459)
....+...+.+.-.+++++|+|..||...... +.+..++..+. .+.+++|+++..+ +..... . .
T Consensus 169 ----------~~~~~~~~~~~~l~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~-~~~~vv~~~G~~~--~~~~~~-~-~ 233 (352)
T PRK12446 169 ----------KGNREKGLAFLGFSRKKPVITIMGGSLGAKKINETVREALPELL-LKYQIVHLCGKGN--LDDSLQ-N-K 233 (352)
T ss_pred ----------cccchHHHHhcCCCCCCcEEEEECCccchHHHHHHHHHHHHhhc-cCcEEEEEeCCch--HHHHHh-h-c
Confidence 11111222223333467799999999875322 22333333332 2477888877532 111111 1 1
Q ss_pred CCceEEeee-cHH-HHhcccCccceeccCchhhHHHhhhcCCeeeccccc-----cchhhHHHHHHHhhhceEEeeecCC
Q 012645 322 ETGLVVRWC-NQF-EVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQF-----SDQPTNAKFVEEVWEVGVRAKKNRA 394 (459)
Q Consensus 322 ~~v~v~~~~-p~~-~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~-----~DQ~~na~rv~~~~G~G~~~~~~~~ 394 (459)
.+..+.+|+ ++. ++++++++ +|||||.+|+.|++++|+|+|++|+. .||..||..+++. |+|..+...
T Consensus 234 ~~~~~~~f~~~~m~~~~~~adl--vIsr~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~-g~~~~l~~~-- 308 (352)
T PRK12446 234 EGYRQFEYVHGELPDILAITDF--VISRAGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFERQ-GYASVLYEE-- 308 (352)
T ss_pred CCcEEecchhhhHHHHHHhCCE--EEECCChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHHC-CCEEEcchh--
Confidence 345566887 534 89988888 99999999999999999999999974 4899999999999 999999887
Q ss_pred CcccHHHHHHHHHHHhcChhhHHHHHHHHH
Q 012645 395 GIVTGEELNKCVNEVMDGERSQKIKRNVSK 424 (459)
Q Consensus 395 ~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~ 424 (459)
+++++.|.+++.++++|+ +.+++++++
T Consensus 309 -~~~~~~l~~~l~~ll~~~--~~~~~~~~~ 335 (352)
T PRK12446 309 -DVTVNSLIKHVEELSHNN--EKYKTALKK 335 (352)
T ss_pred -cCCHHHHHHHHHHHHcCH--HHHHHHHHH
Confidence 899999999999999886 245544433
|
|
| >PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-26 Score=220.73 Aligned_cols=306 Identities=18% Similarity=0.201 Sum_probs=196.6
Q ss_pred cEEEEEcCC-CccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcCCCCCCCCCCCCCCHHHHHHHH---H
Q 012645 8 VHVLVLTYP-AQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDEGGFKQAPSVKAYLESF---K 83 (459)
Q Consensus 8 ~kil~~~~~-~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 83 (459)
|||+|...+ +.||+.++++||++| +||+|+|++.....+.+... +.+..++.-.... ....-+........ .
T Consensus 1 MkIl~~v~~~G~GH~~R~~~la~~L--rg~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 76 (318)
T PF13528_consen 1 MKILFYVQGHGLGHASRCLALARAL--RGHEVTFITSGPAPEFLKPR-FPVREIPGLGPIQ-ENGRLDRWKTVRNNIRWL 76 (318)
T ss_pred CEEEEEeCCCCcCHHHHHHHHHHHH--ccCceEEEEcCCcHHHhccc-cCEEEccCceEec-cCCccchHHHHHHHHHhh
Confidence 899999887 999999999999999 59999999998776666554 5666664221111 11111111221111 1
Q ss_pred HhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCcccCC
Q 012645 84 TVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLP 163 (459)
Q Consensus 84 ~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~p 163 (459)
......++++.+.++.. +||+||+| +.+.+..+|+..|+|++.+.+..... .|
T Consensus 77 ~~~~~~~~~~~~~l~~~--~pDlVIsD-~~~~~~~aa~~~giP~i~i~~~~~~~------------------------~~ 129 (318)
T PF13528_consen 77 ARLARRIRREIRWLREF--RPDLVISD-FYPLAALAARRAGIPVIVISNQYWFL------------------------HP 129 (318)
T ss_pred HHHHHHHHHHHHHHHhc--CCCEEEEc-ChHHHHHHHHhcCCCEEEEEehHHcc------------------------cc
Confidence 12234444555555444 89999999 45557899999999999998765210 00
Q ss_pred CCCCCCCCCCCccccCCCCChHHHHHHHHHhhc--ccCCceEEEcchhHhhHHHHHHHhcCCCeeeecccCCCccccccc
Q 012645 164 GLPSLASSDLPSFLAQPASNPAYLAAILEQFGS--LNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAYLDQQI 241 (459)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vgp~~~~~~~~~~~ 241 (459)
... ... . ......+.+.... +..++..+.-++. .. .....+..++||......
T Consensus 130 ~~~-~~~---------~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~------~~~~~~~~~~~p~~~~~~----- 184 (318)
T PF13528_consen 130 NFW-LPW---------D---QDFGRLIERYIDRYHFPPADRRLALSFY-PP------LPPFFRVPFVGPIIRPEI----- 184 (318)
T ss_pred cCC-cch---------h---hhHHHHHHHhhhhccCCcccceecCCcc-cc------ccccccccccCchhcccc-----
Confidence 000 000 0 0111222222221 2333333333332 00 011123556777665410
Q ss_pred cCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCC-CcEEEEEeCCCCCCchhhhhhc
Q 012645 242 AGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASE-KPFLWVVKENENKLPVEFVNSV 320 (459)
Q Consensus 242 ~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~-~~~v~~~~~~~~~~~~~~~~~~ 320 (459)
.... ..+++.|+|++|..... .++++++..+ +.+++. +.. . .+..
T Consensus 185 ------------------~~~~--~~~~~~iLv~~gg~~~~------~~~~~l~~~~~~~~~v~-g~~-~------~~~~ 230 (318)
T PF13528_consen 185 ------------------RELP--PEDEPKILVYFGGGGPG------DLIEALKALPDYQFIVF-GPN-A------ADPR 230 (318)
T ss_pred ------------------cccC--CCCCCEEEEEeCCCcHH------HHHHHHHhCCCCeEEEE-cCC-c------cccc
Confidence 0000 12345899999997542 6677777766 566665 432 1 1113
Q ss_pred CCCceEEeee--cHHHHhcccCccceeccCchhhHHHhhhcCCeeecccc--ccchhhHHHHHHHhhhceEEeeecCCCc
Q 012645 321 GETGLVVRWC--NQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQ--FSDQPTNAKFVEEVWEVGVRAKKNRAGI 396 (459)
Q Consensus 321 ~~~v~v~~~~--p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~--~~DQ~~na~rv~~~~G~G~~~~~~~~~~ 396 (459)
.+|+.+.++. ...++|+.+++ +|+|||+||++|++++|+|+|++|. ..||..||++++++ |+|..++.. +
T Consensus 231 ~~ni~~~~~~~~~~~~~m~~ad~--vIs~~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~-G~~~~~~~~---~ 304 (318)
T PF13528_consen 231 PGNIHVRPFSTPDFAELMAAADL--VISKGGYTTISEALALGKPALVIPRPGQDEQEYNARKLEEL-GLGIVLSQE---D 304 (318)
T ss_pred CCCEEEeecChHHHHHHHHhCCE--EEECCCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHC-CCeEEcccc---c
Confidence 6889999876 45589977776 9999999999999999999999999 78999999999999 999999888 8
Q ss_pred ccHHHHHHHHHHH
Q 012645 397 VTGEELNKCVNEV 409 (459)
Q Consensus 397 ~~~~~l~~~i~~l 409 (459)
++++.|.++|+++
T Consensus 305 ~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 305 LTPERLAEFLERL 317 (318)
T ss_pred CCHHHHHHHHhcC
Confidence 9999999999864
|
|
| >TIGR00661 MJ1255 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.6e-24 Score=202.52 Aligned_cols=309 Identities=14% Similarity=0.111 Sum_probs=176.4
Q ss_pred EEEEEcCC-CccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCce-EEEcCCCCCCCCCCCCCCHHHHHHHHHHhc
Q 012645 9 HVLVLTYP-AQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVG-VEPISDGFDEGGFKQAPSVKAYLESFKTVG 86 (459)
Q Consensus 9 kil~~~~~-~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (459)
||++...| +.||+.|.++||++|++ ||+|+|+++......+...++. +...|. +........-+....+.......
T Consensus 1 ril~~~~g~G~GH~~r~~ala~~L~~-g~ev~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~l~~~~~~~ 78 (321)
T TIGR00661 1 KILYSVCGEGFGHTTRSVAIGEALKN-DYEVSYIASGRSKNYISKYGFKVFETFPG-IKLKGEDGKVNIVKTLRNKEYSP 78 (321)
T ss_pred CEEEEEeccCccHHHHHHHHHHHHhC-CCeEEEEEcCCHHHhhhhhcCcceeccCC-ceEeecCCcCcHHHHHHhhcccc
Confidence 57787766 55999999999999999 9999999988866666666665 444331 11000001111222221100111
Q ss_pred hHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCcccCCCCC
Q 012645 87 SRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPGLP 166 (459)
Q Consensus 87 ~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~p~~~ 166 (459)
...+.+..+.+++. +||+||+| +.+.+..+|+.+|||++.+..+.... .|+.
T Consensus 79 ~~~~~~~~~~l~~~--~pDlVi~d-~~~~~~~aA~~~~iP~i~i~~q~~~~------------------------~~~~- 130 (321)
T TIGR00661 79 KKAIRREINIIREY--NPDLIISD-FEYSTVVAAKLLKIPVICISNQNYTR------------------------YPLK- 130 (321)
T ss_pred HHHHHHHHHHHHhc--CCCEEEEC-CchHHHHHHHhcCCCEEEEecchhhc------------------------CCcc-
Confidence 12333333433333 89999999 66668899999999999887643100 1110
Q ss_pred CCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcCCCeeeecccCCCccccccccCCcc
Q 012645 167 SLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAYLDQQIAGDSA 246 (459)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vgp~~~~~~~~~~~~~~~~ 246 (459)
. +......+.+...+. ...+......+..... ..+ +..... .+
T Consensus 131 ---~----------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-------~~p------~~~~~~--~~------- 173 (321)
T TIGR00661 131 ---T----------DLIVYPTMAALRIFN--ERCERFIVPDYPFPYT-------ICP------KIIKNM--EG------- 173 (321)
T ss_pred ---c----------chhHHHHHHHHHHhc--cccceEeeecCCCCCC-------CCc------cccccC--CC-------
Confidence 0 000001111111111 1122222222211000 000 000000 00
Q ss_pred CCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhcCCCceE
Q 012645 247 YGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENENKLPVEFVNSVGETGLV 326 (459)
Q Consensus 247 ~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~v 326 (459)
.....+..++... .++.|++.+|+.. ...+++++++.+. +.+++... +...+ ..++|+.+
T Consensus 174 ------~~~~~~~~~~~~~--~~~~iLv~~g~~~------~~~l~~~l~~~~~-~~~i~~~~-~~~~~----~~~~~v~~ 233 (321)
T TIGR00661 174 ------PLIRYDVDDVDNY--GEDYILVYIGFEY------RYKILELLGKIAN-VKFVCYSY-EVAKN----SYNENVEI 233 (321)
T ss_pred ------cccchhhhccccC--CCCcEEEECCcCC------HHHHHHHHHhCCC-eEEEEeCC-CCCcc----ccCCCEEE
Confidence 0001112222221 3446777778743 2456777777653 23332222 11111 24578999
Q ss_pred Eeeec--HHHHhcccCccceeccCchhhHHHhhhcCCeeecccccc--chhhHHHHHHHhhhceEEeeecCCCcccHHHH
Q 012645 327 VRWCN--QFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFS--DQPTNAKFVEEVWEVGVRAKKNRAGIVTGEEL 402 (459)
Q Consensus 327 ~~~~p--~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~--DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l 402 (459)
.+|.| ..++|+.+++ +|||||++|++||+++|+|+|++|... ||..||..++++ |+|..++.. ++ ++
T Consensus 234 ~~~~~~~~~~~l~~ad~--vI~~~G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~-g~~~~l~~~---~~---~~ 304 (321)
T TIGR00661 234 RRITTDNFKELIKNAEL--VITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDL-GCGIALEYK---EL---RL 304 (321)
T ss_pred EECChHHHHHHHHhCCE--EEECCChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHC-CCEEEcChh---hH---HH
Confidence 99997 4478866666 999999999999999999999999854 899999999999 999999866 44 66
Q ss_pred HHHHHHHhcCh
Q 012645 403 NKCVNEVMDGE 413 (459)
Q Consensus 403 ~~~i~~ll~~~ 413 (459)
.+++.++++|+
T Consensus 305 ~~~~~~~~~~~ 315 (321)
T TIGR00661 305 LEAILDIRNMK 315 (321)
T ss_pred HHHHHhccccc
Confidence 66777777776
|
This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases. |
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.4e-23 Score=193.36 Aligned_cols=309 Identities=20% Similarity=0.221 Sum_probs=194.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCC-eEEEEecCccccc--cCCCCceEEEcCCCCCCCCCCCCCCHHHHHHHHHH
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRV-KATLATTHYTVKS--IHATTVGVEPISDGFDEGGFKQAPSVKAYLESFKT 84 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh-~V~~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (459)
|+|++...||.||+.|.++++++|.++|+ +|.+..+.+..+. ....++.++.++..-....... ......++.+..
T Consensus 1 ~~ivl~~gGTGGHv~pAlAl~~~l~~~g~~~v~~~~~~~~~e~~l~~~~~~~~~~I~~~~~~~~~~~-~~~~~~~~~~~~ 79 (357)
T COG0707 1 KKIVLTAGGTGGHVFPALALAEELAKRGWEQVIVLGTGDGLEAFLVKQYGIEFELIPSGGLRRKGSL-KLLKAPFKLLKG 79 (357)
T ss_pred CeEEEEeCCCccchhHHHHHHHHHHhhCccEEEEecccccceeeeccccCceEEEEecccccccCcH-HHHHHHHHHHHH
Confidence 57899999999999999999999999999 5888877655544 3335888888863322111000 111111222211
Q ss_pred hchHHHHHHHHHhhcCCCCccEEEeCCCc--hhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCcccC
Q 012645 85 VGSRTLAEVILKYKDSESPVNCIVYDSLL--TWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTL 162 (459)
Q Consensus 85 ~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~--~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 162 (459)
....+.+++++ +||+||.-..+ ..+..+|..+|||.+...... +
T Consensus 80 --~~~a~~il~~~-----kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEqn~---------------------------~ 125 (357)
T COG0707 80 --VLQARKILKKL-----KPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQNA---------------------------V 125 (357)
T ss_pred --HHHHHHHHHHc-----CCCEEEecCCccccHHHHHHHhCCCCEEEEecCC---------------------------C
Confidence 13345566665 99999984333 457889999999999986644 4
Q ss_pred CCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcCCCeeeec-ccCCCccccccc
Q 012645 163 PGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIG-PLVPSAYLDQQI 241 (459)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vg-p~~~~~~~~~~~ 241 (459)
||+- .+...+.. +.+ ..+++..+ ......++..+| |..+++.
T Consensus 126 ~G~a--------------------nk~~~~~a------~~V-~~~f~~~~-----~~~~~~~~~~tG~Pvr~~~~----- 168 (357)
T COG0707 126 PGLA--------------------NKILSKFA------KKV-ASAFPKLE-----AGVKPENVVVTGIPVRPEFE----- 168 (357)
T ss_pred cchh--------------------HHHhHHhh------cee-eecccccc-----ccCCCCceEEecCcccHHhh-----
Confidence 4421 01111111 111 11111100 011111366666 3333320
Q ss_pred cCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHH-HHHHHHhC--CCcEEEEEeCCCCCCchhhhh
Q 012645 242 AGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDE-IARGLKAS--EKPFLWVVKENENKLPVEFVN 318 (459)
Q Consensus 242 ~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~-i~~a~~~~--~~~~v~~~~~~~~~~~~~~~~ 318 (459)
. .+.....+... .++++|+|.-||... ..++. +.+++..+ +..++...+... .+....
T Consensus 169 -----------~-~~~~~~~~~~~-~~~~~ilV~GGS~Ga---~~ln~~v~~~~~~l~~~~~v~~~~G~~~---~~~~~~ 229 (357)
T COG0707 169 -----------E-LPAAEVRKDGR-LDKKTILVTGGSQGA---KALNDLVPEALAKLANRIQVIHQTGKND---LEELKS 229 (357)
T ss_pred -----------c-cchhhhhhhcc-CCCcEEEEECCcchh---HHHHHHHHHHHHHhhhCeEEEEEcCcch---HHHHHH
Confidence 1 11111112111 256799999999874 22333 33333333 356666665531 112221
Q ss_pred hcC-CC-ceEEeeecHH-HHhcccCccceeccCchhhHHHhhhcCCeeeccccc----cchhhHHHHHHHhhhceEEeee
Q 012645 319 SVG-ET-GLVVRWCNQF-EVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQF----SDQPTNAKFVEEVWEVGVRAKK 391 (459)
Q Consensus 319 ~~~-~~-v~v~~~~p~~-~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~----~DQ~~na~rv~~~~G~G~~~~~ 391 (459)
... .+ +.+.+|+.++ .+++.+|+ +||++|.+|+.|++++|+|.|.+|.- .||..||..+++. |.|..++.
T Consensus 230 ~~~~~~~~~v~~f~~dm~~~~~~ADL--vIsRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~-gaa~~i~~ 306 (357)
T COG0707 230 AYNELGVVRVLPFIDDMAALLAAADL--VISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKA-GAALVIRQ 306 (357)
T ss_pred HHhhcCcEEEeeHHhhHHHHHHhccE--EEeCCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhC-CCEEEecc
Confidence 221 22 6777898877 89988888 99999999999999999999999963 3899999999999 99999999
Q ss_pred cCCCcccHHHHHHHHHHHhcCh
Q 012645 392 NRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 392 ~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
. ++|++.+.+.|.++++++
T Consensus 307 ~---~lt~~~l~~~i~~l~~~~ 325 (357)
T COG0707 307 S---ELTPEKLAELILRLLSNP 325 (357)
T ss_pred c---cCCHHHHHHHHHHHhcCH
Confidence 8 899999999999999985
|
|
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.7e-19 Score=175.35 Aligned_cols=320 Identities=16% Similarity=0.122 Sum_probs=190.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCcc--ccccCCCCceEEEcCCCCCCCCCCCCCCHHHHHHHHHHh
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYT--VKSIHATTVGVEPISDGFDEGGFKQAPSVKAYLESFKTV 85 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (459)
|||+|++.+..||....+.||++|.++||+|++++.+.. ....+..|+.++.++..-.. .......+......
T Consensus 2 ~~i~i~~~g~gG~~~~~~~la~~L~~~g~ev~vv~~~~~~~~~~~~~~g~~~~~~~~~~~~-----~~~~~~~l~~~~~~ 76 (357)
T PRK00726 2 KKILLAGGGTGGHVFPALALAEELKKRGWEVLYLGTARGMEARLVPKAGIEFHFIPSGGLR-----RKGSLANLKAPFKL 76 (357)
T ss_pred cEEEEEcCcchHhhhHHHHHHHHHHhCCCEEEEEECCCchhhhccccCCCcEEEEeccCcC-----CCChHHHHHHHHHH
Confidence 899999999899999999999999999999999998653 23334458888777531000 01111111111111
Q ss_pred --chHHHHHHHHHhhcCCCCccEEEeCCC--chhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCccc
Q 012645 86 --GSRTLAEVILKYKDSESPVNCIVYDSL--LTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLT 161 (459)
Q Consensus 86 --~~~~~~~l~~~~~~~~~~~Dlvi~D~~--~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 161 (459)
....+.+++++. +||+|++... ...+..+++..++|++......
T Consensus 77 ~~~~~~~~~~ik~~-----~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~--------------------------- 124 (357)
T PRK00726 77 LKGVLQARKILKRF-----KPDVVVGFGGYVSGPGGLAARLLGIPLVIHEQNA--------------------------- 124 (357)
T ss_pred HHHHHHHHHHHHhc-----CCCEEEECCCcchhHHHHHHHHcCCCEEEEcCCC---------------------------
Confidence 011233344433 8999999863 2345667778899998642210
Q ss_pred CCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcCCCeeeecccCCCccccccc
Q 012645 162 LPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAYLDQQI 241 (459)
Q Consensus 162 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vgp~~~~~~~~~~~ 241 (459)
.|+ ...+... ..++.+++.+-..+ .. .+..++.++|+.+....+.
T Consensus 125 ~~~--------------------~~~r~~~------~~~d~ii~~~~~~~----~~--~~~~~i~vi~n~v~~~~~~--- 169 (357)
T PRK00726 125 VPG--------------------LANKLLA------RFAKKVATAFPGAF----PE--FFKPKAVVTGNPVREEILA--- 169 (357)
T ss_pred Ccc--------------------HHHHHHH------HHhchheECchhhh----hc--cCCCCEEEECCCCChHhhc---
Confidence 000 0111111 12233333222111 01 1123577888665442110
Q ss_pred cCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCC--cEEEEEeCCC-CCCchhhhh
Q 012645 242 AGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEK--PFLWVVKENE-NKLPVEFVN 318 (459)
Q Consensus 242 ~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~--~~v~~~~~~~-~~~~~~~~~ 318 (459)
+ .. ...-+...+++++|++..|+... ......+.+++.+... .+++.++... +.+.+.. +
T Consensus 170 ------------~-~~-~~~~~~~~~~~~~i~~~gg~~~~--~~~~~~l~~a~~~~~~~~~~~~~~G~g~~~~~~~~~-~ 232 (357)
T PRK00726 170 ------------L-AA-PPARLAGREGKPTLLVVGGSQGA--RVLNEAVPEALALLPEALQVIHQTGKGDLEEVRAAY-A 232 (357)
T ss_pred ------------c-cc-hhhhccCCCCCeEEEEECCcHhH--HHHHHHHHHHHHHhhhCcEEEEEcCCCcHHHHHHHh-h
Confidence 0 00 00011112234466665555432 1122333366655433 3445555432 1111111 1
Q ss_pred hcCCCceEEeeec-HHHHhcccCccceeccCchhhHHHhhhcCCeeecccc----ccchhhHHHHHHHhhhceEEeeecC
Q 012645 319 SVGETGLVVRWCN-QFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQ----FSDQPTNAKFVEEVWEVGVRAKKNR 393 (459)
Q Consensus 319 ~~~~~v~v~~~~p-~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~----~~DQ~~na~rv~~~~G~G~~~~~~~ 393 (459)
..-++.+.+|+. ..++++.+++ +|+|+|.++++||+++|+|+|++|. ..||..|+..+.+. |.|..+...
T Consensus 233 -~~~~v~~~g~~~~~~~~~~~~d~--~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~-~~g~~~~~~- 307 (357)
T PRK00726 233 -AGINAEVVPFIDDMAAAYAAADL--VICRAGASTVAELAAAGLPAILVPLPHAADDHQTANARALVDA-GAALLIPQS- 307 (357)
T ss_pred -cCCcEEEeehHhhHHHHHHhCCE--EEECCCHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHC-CCEEEEEcc-
Confidence 222377789984 4589977777 9999999999999999999999996 36899999999999 999999877
Q ss_pred CCcccHHHHHHHHHHHhcChhhHHHHHHHHHHH
Q 012645 394 AGIVTGEELNKCVNEVMDGERSQKIKRNVSKWR 426 (459)
Q Consensus 394 ~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~ 426 (459)
.++++.|.++|.++++|+ +.+++..+-+
T Consensus 308 --~~~~~~l~~~i~~ll~~~---~~~~~~~~~~ 335 (357)
T PRK00726 308 --DLTPEKLAEKLLELLSDP---ERLEAMAEAA 335 (357)
T ss_pred --cCCHHHHHHHHHHHHcCH---HHHHHHHHHH
Confidence 778999999999999997 5554444433
|
|
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.5e-18 Score=166.73 Aligned_cols=310 Identities=16% Similarity=0.149 Sum_probs=184.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccc--cccCCCCceEEEcCCCCCCCCCCCCCCHHHHHHHHHHhc
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTV--KSIHATTVGVEPISDGFDEGGFKQAPSVKAYLESFKTVG 86 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (459)
||++.+.++.||....+.||++|.++||+|++++..... ......|+++..++..-.. .......+.......
T Consensus 1 ~~~~~~~~~gG~~~~~~~la~~l~~~G~ev~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 75 (350)
T cd03785 1 RILIAGGGTGGHIFPALALAEELRERGAEVLFLGTKRGLEARLVPKAGIPLHTIPVGGLR-----RKGSLKKLKAPFKLL 75 (350)
T ss_pred CEEEEecCchhhhhHHHHHHHHHHhCCCEEEEEECCCcchhhcccccCCceEEEEecCcC-----CCChHHHHHHHHHHH
Confidence 689999999999999999999999999999999875432 1222246777776522110 011122222211111
Q ss_pred --hHHHHHHHHHhhcCCCCccEEEeCCC--chhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCcccC
Q 012645 87 --SRTLAEVILKYKDSESPVNCIVYDSL--LTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTL 162 (459)
Q Consensus 87 --~~~~~~l~~~~~~~~~~~Dlvi~D~~--~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 162 (459)
...+..++++. +||+|+++.. ...+..+|+..|+|++...... .
T Consensus 76 ~~~~~~~~~i~~~-----~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~~~~---------------------------~ 123 (350)
T cd03785 76 KGVLQARKILKKF-----KPDVVVGFGGYVSGPVGLAAKLLGIPLVIHEQNA---------------------------V 123 (350)
T ss_pred HHHHHHHHHHHhc-----CCCEEEECCCCcchHHHHHHHHhCCCEEEEcCCC---------------------------C
Confidence 12233444443 8999998653 3446778889999998632110 0
Q ss_pred CCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcCCCeeeecccCCCcccccccc
Q 012645 163 PGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAYLDQQIA 242 (459)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vgp~~~~~~~~~~~~ 242 (459)
|+ .. .+.. ....+.+++.+-...+. .+ ..++.++|+.+....+.
T Consensus 124 ~~--------------------~~----~~~~--~~~~~~vi~~s~~~~~~-----~~-~~~~~~i~n~v~~~~~~---- 167 (350)
T cd03785 124 PG--------------------LA----NRLL--ARFADRVALSFPETAKY-----FP-KDKAVVTGNPVREEILA---- 167 (350)
T ss_pred cc--------------------HH----HHHH--HHhhCEEEEcchhhhhc-----CC-CCcEEEECCCCchHHhh----
Confidence 00 00 1111 12245555544332211 11 12466777654431110
Q ss_pred CCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHh---CCCcEEEEEeCCC-CCCchhhhh
Q 012645 243 GDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKA---SEKPFLWVVKENE-NKLPVEFVN 318 (459)
Q Consensus 243 ~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~---~~~~~v~~~~~~~-~~~~~~~~~ 318 (459)
+.+. ...+...+++++|++..|+.... ...+.+.+++.. .+..+++.++... +.+.+...+
T Consensus 168 -----------~~~~--~~~~~~~~~~~~i~~~~g~~~~~--~~~~~l~~a~~~l~~~~~~~~~i~G~g~~~~l~~~~~~ 232 (350)
T cd03785 168 -----------LDRE--RARLGLRPGKPTLLVFGGSQGAR--AINEAVPEALAELLRKRLQVIHQTGKGDLEEVKKAYEE 232 (350)
T ss_pred -----------hhhh--HHhcCCCCCCeEEEEECCcHhHH--HHHHHHHHHHHHhhccCeEEEEEcCCccHHHHHHHHhc
Confidence 0010 11222223444666666665421 222223344433 3344555555432 112111111
Q ss_pred hcCCCceEEeee-cHHHHhcccCccceeccCchhhHHHhhhcCCeeecccc----ccchhhHHHHHHHhhhceEEeeecC
Q 012645 319 SVGETGLVVRWC-NQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQ----FSDQPTNAKFVEEVWEVGVRAKKNR 393 (459)
Q Consensus 319 ~~~~~v~v~~~~-p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~----~~DQ~~na~rv~~~~G~G~~~~~~~ 393 (459)
..+|+++.+|+ ...++|+.+++ +|+++|.+|+.||+++|+|+|++|. ..+|..|+..+.+. |.|..++..
T Consensus 233 -~~~~v~~~g~~~~~~~~l~~ad~--~v~~sg~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~~-g~g~~v~~~- 307 (350)
T cd03785 233 -LGVNYEVFPFIDDMAAAYAAADL--VISRAGASTVAELAALGLPAILIPLPYAADDHQTANARALVKA-GAAVLIPQE- 307 (350)
T ss_pred -cCCCeEEeehhhhHHHHHHhcCE--EEECCCHhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHhC-CCEEEEecC-
Confidence 24689999998 45589977777 9999999999999999999999985 35799999999999 999999865
Q ss_pred CCcccHHHHHHHHHHHhcCh
Q 012645 394 AGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 394 ~~~~~~~~l~~~i~~ll~~~ 413 (459)
..++++|.++|.++++|+
T Consensus 308 --~~~~~~l~~~i~~ll~~~ 325 (350)
T cd03785 308 --ELTPERLAAALLELLSDP 325 (350)
T ss_pred --CCCHHHHHHHHHHHhcCH
Confidence 579999999999999887
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >COG4671 Predicted glycosyl transferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.5e-18 Score=153.58 Aligned_cols=333 Identities=17% Similarity=0.174 Sum_probs=204.5
Q ss_pred CCcEEEEEcCC--CccCHHHHHHHHHHHHhC--CCeEEEEecCccccccCC-CCceEEEcCCCCCC--CCCCCCCCHHHH
Q 012645 6 ERVHVLVLTYP--AQGHINPLLQFAKRLASK--RVKATLATTHYTVKSIHA-TTVGVEPISDGFDE--GGFKQAPSVKAY 78 (459)
Q Consensus 6 ~~~kil~~~~~--~~GH~~p~~~la~~L~~~--Gh~V~~~~~~~~~~~~~~-~g~~~~~~~~~~~~--~~~~~~~~~~~~ 78 (459)
+.+||+|++.- +.||+.++..||.+|++. |.+|++++...-..-+.- .|++|+.+|.-... +..... +.-.-
T Consensus 8 ~~~Ri~~Yshd~~GlGHlrR~~~Ia~aLv~d~~~~~Il~IsG~~~~~~F~~~~gVd~V~LPsl~k~~~G~~~~~-d~~~~ 86 (400)
T COG4671 8 KRPRILFYSHDLLGLGHLRRALRIAHALVEDYLGFDILIISGGPPAGGFPGPAGVDFVKLPSLIKGDNGEYGLV-DLDGD 86 (400)
T ss_pred ccceEEEEehhhccchHHHHHHHHHHHHhhcccCceEEEEeCCCccCCCCCcccCceEecCceEecCCCceeee-ecCCC
Confidence 34599999985 889999999999999997 999999999877666655 69999999943221 111110 00011
Q ss_pred HHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCC
Q 012645 79 LESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETV 158 (459)
Q Consensus 79 ~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 158 (459)
...+.+...+.+...++.+ +||++|+|.+-++ . -.++ .|..- ......+.+
T Consensus 87 l~e~~~~Rs~lil~t~~~f-----kPDi~IVd~~P~G-l--r~EL-~ptL~--------------yl~~~~t~~------ 137 (400)
T COG4671 87 LEETKKLRSQLILSTAETF-----KPDIFIVDKFPFG-L--RFEL-LPTLE--------------YLKTTGTRL------ 137 (400)
T ss_pred HHHHHHHHHHHHHHHHHhc-----CCCEEEEeccccc-h--hhhh-hHHHH--------------HHhhcCCcc------
Confidence 3444455455666677776 9999999977664 1 1111 11110 000000000
Q ss_pred cccCCCCCCCCCC---CCCccccCCCCChHHHHHHHHHhhcccCCceEEEc---chhHhhHHHHHHHhcCCCeeeecccC
Q 012645 159 PLTLPGLPSLASS---DLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCN---SFEELEKELLRAMLGLWPLVMIGPLV 232 (459)
Q Consensus 159 ~~~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~vgp~~ 232 (459)
-+..+ |.+......|........+.+++. .+.+. .|+.++..+.....-..++.|+|.+
T Consensus 138 --------vL~lr~i~D~p~~~~~~w~~~~~~~~I~r~yD------~V~v~GdP~f~d~~~~~~~~~~i~~k~~ytG~v- 202 (400)
T COG4671 138 --------VLGLRSIRDIPQELEADWRRAETVRLINRFYD------LVLVYGDPDFYDPLTEFPFAPAIRAKMRYTGFV- 202 (400)
T ss_pred --------eeehHhhhhchhhhccchhhhHHHHHHHHhhe------EEEEecCccccChhhcCCccHhhhhheeEeEEe-
Confidence 02222 222222222322333333333332 22332 2222221111111111358889977
Q ss_pred CCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHh-CCCc--EEEEEeCCC
Q 012645 233 PSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKA-SEKP--FLWVVKENE 309 (459)
Q Consensus 233 ~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~-~~~~--~v~~~~~~~ 309 (459)
..... +. +.+ +... +++..|+||-|... ...+++...++|... .+.+ .+++++
T Consensus 203 q~~~~------------~~--~~p-----~~~~-pE~~~Ilvs~GGG~-dG~eLi~~~l~A~~~l~~l~~~~~ivtG--- 258 (400)
T COG4671 203 QRSLP------------HL--PLP-----PHEA-PEGFDILVSVGGGA-DGAELIETALAAAQLLAGLNHKWLIVTG--- 258 (400)
T ss_pred eccCc------------CC--CCC-----CcCC-CccceEEEecCCCh-hhHHHHHHHHHHhhhCCCCCcceEEEeC---
Confidence 22100 00 000 0000 34458999888854 355666666666655 4444 444443
Q ss_pred CCCchh----hhhhcC--CCceEEeeecHH-HHhcccCccceeccCchhhHHHhhhcCCeeeccccc---cchhhHHHHH
Q 012645 310 NKLPVE----FVNSVG--ETGLVVRWCNQF-EVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQF---SDQPTNAKFV 379 (459)
Q Consensus 310 ~~~~~~----~~~~~~--~~v~v~~~~p~~-~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~---~DQ~~na~rv 379 (459)
...|.. +....+ +++.+..|-.+. .+++.++. +|+-||+||++|-|++|+|.|++|+. -||..-|.|+
T Consensus 259 P~MP~~~r~~l~~~A~~~p~i~I~~f~~~~~~ll~gA~~--vVSm~GYNTvCeILs~~k~aLivPr~~p~eEQliRA~Rl 336 (400)
T COG4671 259 PFMPEAQRQKLLASAPKRPHISIFEFRNDFESLLAGARL--VVSMGGYNTVCEILSFGKPALIVPRAAPREEQLIRAQRL 336 (400)
T ss_pred CCCCHHHHHHHHHhcccCCCeEEEEhhhhHHHHHHhhhe--eeecccchhhhHHHhCCCceEEeccCCCcHHHHHHHHHH
Confidence 334433 333344 789999998766 89977777 99999999999999999999999985 3999999999
Q ss_pred HHhhhceEEeeecCCCcccHHHHHHHHHHHhcCh
Q 012645 380 EEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 380 ~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
+++ |+.-++..+ .++++.+.++|...++-+
T Consensus 337 ~~L-GL~dvL~pe---~lt~~~La~al~~~l~~P 366 (400)
T COG4671 337 EEL-GLVDVLLPE---NLTPQNLADALKAALARP 366 (400)
T ss_pred Hhc-CcceeeCcc---cCChHHHHHHHHhcccCC
Confidence 999 999999998 899999999999999843
|
|
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.6e-16 Score=153.94 Aligned_cols=306 Identities=17% Similarity=0.141 Sum_probs=172.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccc--cccCCCCceEEEcCCCCCCCCCCCCCCHHHHHHHHHHh
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTV--KSIHATTVGVEPISDGFDEGGFKQAPSVKAYLESFKTV 85 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (459)
|||+|++.+..||+...+.||++|.++||+|++++.+... ...+..|++++.++..-.. .......+......
T Consensus 1 ~~i~~~~g~~~g~~~~~~~La~~L~~~g~eV~vv~~~~~~~~~~~~~~g~~~~~i~~~~~~-----~~~~~~~l~~~~~~ 75 (348)
T TIGR01133 1 KKVVLAAGGTGGHIFPALAVAEELIKRGVEVLWLGTKRGLEKRLVPKAGIEFYFIPVGGLR-----RKGSFRLIKTPLKL 75 (348)
T ss_pred CeEEEEeCccHHHHhHHHHHHHHHHhCCCEEEEEeCCCcchhcccccCCCceEEEeccCcC-----CCChHHHHHHHHHH
Confidence 6899999999999998889999999999999999874432 2223457877777522100 11122222221111
Q ss_pred --chHHHHHHHHHhhcCCCCccEEEeCCCc--hhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCccc
Q 012645 86 --GSRTLAEVILKYKDSESPVNCIVYDSLL--TWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLT 161 (459)
Q Consensus 86 --~~~~~~~l~~~~~~~~~~~Dlvi~D~~~--~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 161 (459)
....+.+++++. +||+|++.... ..+..+++.+++|.+......
T Consensus 76 ~~~~~~l~~~i~~~-----~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~~~~~--------------------------- 123 (348)
T TIGR01133 76 LKAVFQARRILKKF-----KPDAVIGFGGYVSGPAGLAAKLLGIPLFHHEQNA--------------------------- 123 (348)
T ss_pred HHHHHHHHHHHHhc-----CCCEEEEcCCcccHHHHHHHHHcCCCEEEECCCC---------------------------
Confidence 112233444443 89999987543 335567888899987431100
Q ss_pred CCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcCCCeeeecccCCCccccccc
Q 012645 162 LPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAYLDQQI 241 (459)
Q Consensus 162 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vgp~~~~~~~~~~~ 241 (459)
.+ ....+.+. +..+.+++.+....+ .+ ...++|..+....+.
T Consensus 124 ~~--------------------~~~~~~~~------~~~d~ii~~~~~~~~-----~~----~~~~i~n~v~~~~~~--- 165 (348)
T TIGR01133 124 VP--------------------GLTNKLLS------RFAKKVLISFPGAKD-----HF----EAVLVGNPVRQEIRS--- 165 (348)
T ss_pred Cc--------------------cHHHHHHH------HHhCeeEECchhHhh-----cC----CceEEcCCcCHHHhc---
Confidence 00 00111111 234444443322111 11 234555433221000
Q ss_pred cCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHh---CCCcEEEEEeCCCCCCchhhhh
Q 012645 242 AGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKA---SEKPFLWVVKENENKLPVEFVN 318 (459)
Q Consensus 242 ~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~---~~~~~v~~~~~~~~~~~~~~~~ 318 (459)
+.. ....+.-.+++++|.+..|+... ......+.+++.. .+.++++..+..+ . +.+.+
T Consensus 166 ------------~~~--~~~~~~~~~~~~~i~~~gg~~~~--~~~~~~l~~a~~~l~~~~~~~~~~~g~~~--~-~~l~~ 226 (348)
T TIGR01133 166 ------------LPV--PRERFGLREGKPTILVLGGSQGA--KILNELVPKALAKLAEKGIQIVHQTGKND--L-EKVKN 226 (348)
T ss_pred ------------ccc--hhhhcCCCCCCeEEEEECCchhH--HHHHHHHHHHHHHHhhcCcEEEEECCcch--H-HHHHH
Confidence 000 01112111233345444455442 1222223344433 3455655444321 1 22221
Q ss_pred hcCC-C-ceEEeee--cHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccc---cchhhHHHHHHHhhhceEEeee
Q 012645 319 SVGE-T-GLVVRWC--NQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQF---SDQPTNAKFVEEVWEVGVRAKK 391 (459)
Q Consensus 319 ~~~~-~-v~v~~~~--p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~---~DQ~~na~rv~~~~G~G~~~~~ 391 (459)
.... + ..++.+. +..++++.+++ +|+++|.+++.||+++|+|+|++|.. .+|..|+..+++. |.|..++.
T Consensus 227 ~~~~~~l~~~v~~~~~~~~~~l~~ad~--~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~-~~G~~~~~ 303 (348)
T TIGR01133 227 VYQELGIEAIVTFIDENMAAAYAAADL--VISRAGASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDL-GAGLVIRQ 303 (348)
T ss_pred HHhhCCceEEecCcccCHHHHHHhCCE--EEECCChhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHHC-CCEEEEec
Confidence 1111 1 1222333 45689978887 99999988999999999999999863 4688899999999 99998876
Q ss_pred cCCCcccHHHHHHHHHHHhcCh
Q 012645 392 NRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 392 ~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
. ..+++.|.+++.++++|+
T Consensus 304 ~---~~~~~~l~~~i~~ll~~~ 322 (348)
T TIGR01133 304 K---ELLPEKLLEALLKLLLDP 322 (348)
T ss_pred c---cCCHHHHHHHHHHHHcCH
Confidence 6 678999999999999987
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=99.75 E-value=4e-16 Score=152.15 Aligned_cols=346 Identities=11% Similarity=0.050 Sum_probs=193.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCC----ceEEEcCCCCCCCCCCCCCCHHHHHHHHH
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATT----VGVEPISDGFDEGGFKQAPSVKAYLESFK 83 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (459)
.||+|++.++-||+.|. +|+++|+++|++|.|++.... .+++.| +++..++ . ..+...+..+.
T Consensus 6 ~ki~i~aGgtsGhi~pa-al~~~l~~~~~~~~~~g~gg~--~m~~~g~~~~~~~~~l~----v------~G~~~~l~~~~ 72 (385)
T TIGR00215 6 PTIALVAGEASGDILGA-GLRQQLKEHYPNARFIGVAGP--RMAAEGCEVLYSMEELS----V------MGLREVLGRLG 72 (385)
T ss_pred CeEEEEeCCccHHHHHH-HHHHHHHhcCCCcEEEEEccH--HHHhCcCccccChHHhh----h------ccHHHHHHHHH
Confidence 58999999999999999 999999999999999987632 233333 3333332 1 11111222222
Q ss_pred HhchHHHHHHHHHhhcCCCCccEEEe-CCCchh--HHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCcc
Q 012645 84 TVGSRTLAEVILKYKDSESPVNCIVY-DSLLTW--ALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPL 160 (459)
Q Consensus 84 ~~~~~~~~~l~~~~~~~~~~~Dlvi~-D~~~~~--~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 160 (459)
.. ...+.++.+.+++. +||+||. |..++. ...+|+.+|||++.+.+ |
T Consensus 73 ~~-~~~~~~~~~~l~~~--kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i~-P-------------------------- 122 (385)
T TIGR00215 73 RL-LKIRKEVVQLAKQA--KPDLLVGIDAPDFNLTKELKKKDPGIKIIYYIS-P-------------------------- 122 (385)
T ss_pred HH-HHHHHHHHHHHHhc--CCCEEEEeCCCCccHHHHHHHhhCCCCEEEEeC-C--------------------------
Confidence 21 11222333333333 8999985 533333 23388899999997631 1
Q ss_pred cCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcC-CCeeeecccCCCccccc
Q 012645 161 TLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGL-WPLVMIGPLVPSAYLDQ 239 (459)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~vgp~~~~~~~~~ 239 (459)
. .+.|. .+. .+.+.+.. +.+++.. + .+.. .+... .+..++|.-+.+...
T Consensus 123 ---~--------~waw~--~~~----~r~l~~~~------d~v~~~~-~-~e~~---~~~~~g~~~~~vGnPv~~~~~-- 172 (385)
T TIGR00215 123 ---Q--------VWAWR--KWR----AKKIEKAT------DFLLAIL-P-FEKA---FYQKKNVPCRFVGHPLLDAIP-- 172 (385)
T ss_pred ---c--------HhhcC--cch----HHHHHHHH------hHhhccC-C-CcHH---HHHhcCCCEEEECCchhhhcc--
Confidence 0 00000 111 11222211 2112111 1 1111 11211 246678843322100
Q ss_pred cccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhC-----CCcEEEEEeCCC-CCCc
Q 012645 240 QIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKAS-----EKPFLWVVKENE-NKLP 313 (459)
Q Consensus 240 ~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~-----~~~~v~~~~~~~-~~~~ 313 (459)
...+..++..+-+.-.+++++|.+.-||....-......+++++..+ +.++++...... ...-
T Consensus 173 -----------~~~~~~~~~r~~lgl~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~~~~~~ 241 (385)
T TIGR00215 173 -----------LYKPDRKSAREKLGIDHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFKRRLQF 241 (385)
T ss_pred -----------ccCCCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCchhHHHH
Confidence 00011222332233334556888878887542123344455444432 334555443321 0000
Q ss_pred hhhhhhcCCCceEEeee-cHHHHhcccCccceeccCchhhHHHhhhcCCeeecc----cccc---------chhhHHHHH
Q 012645 314 VEFVNSVGETGLVVRWC-NQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAV----PQFS---------DQPTNAKFV 379 (459)
Q Consensus 314 ~~~~~~~~~~v~v~~~~-p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~----P~~~---------DQ~~na~rv 379 (459)
+.+.+....+..+..+. ....+++.+|+ +|+-.|..|+ |++++|+|+|++ |+.. +|..|+..+
T Consensus 242 ~~~~~~~~~~~~v~~~~~~~~~~l~aADl--~V~~SGt~tl-Ea~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil 318 (385)
T TIGR00215 242 EQIKAEYGPDLQLHLIDGDARKAMFAADA--ALLASGTAAL-EAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNIL 318 (385)
T ss_pred HHHHHHhCCCCcEEEECchHHHHHHhCCE--EeecCCHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHh
Confidence 11111121122232222 33468877887 9999999988 999999999999 7632 388899999
Q ss_pred HHhhhceEEeeecCCCcccHHHHHHHHHHHhcCh----h-hHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHH
Q 012645 380 EEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGE----R-SQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVV 448 (459)
Q Consensus 380 ~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~----~-~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~ 448 (459)
... ++...+... ++|++.|.+.+.++++|+ + .+.+++...++.+.+. +.|.+..+++.+++
T Consensus 319 ~~~-~~~pel~q~---~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~a~~i~~ 384 (385)
T TIGR00215 319 ANR-LLVPELLQE---ECTPHPLAIALLLLLENGLKAYKEMHRERQFFEELRQRIY----CNADSERAAQAVLE 384 (385)
T ss_pred cCC-ccchhhcCC---CCCHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHhc----CCCHHHHHHHHHhh
Confidence 999 999998877 899999999999999986 3 3566666666666653 34666666665553
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=99.71 E-value=9.6e-16 Score=142.64 Aligned_cols=260 Identities=14% Similarity=0.135 Sum_probs=152.7
Q ss_pred EEEEEcC----CCccCHHHHHHHHHHHHhCCCeEEEEecCccc---cccCCCCceEEEcCCCCCCCCCCCCCCHHHHHHH
Q 012645 9 HVLVLTY----PAQGHINPLLQFAKRLASKRVKATLATTHYTV---KSIHATTVGVEPISDGFDEGGFKQAPSVKAYLES 81 (459)
Q Consensus 9 kil~~~~----~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (459)
||+|.+- -+.||+.++++||++|+++||+|+|++..... +.+++.|+....+++.-. .
T Consensus 1 ~i~ir~Da~~~iG~GHv~Rcl~LA~~l~~~g~~v~f~~~~~~~~~~~~i~~~g~~v~~~~~~~~------------~--- 65 (279)
T TIGR03590 1 KILFRADASSEIGLGHVMRCLTLARALHAQGAEVAFACKPLPGDLIDLLLSAGFPVYELPDESS------------R--- 65 (279)
T ss_pred CEEEEecCCccccccHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHcCCeEEEecCCCc------------h---
Confidence 3555543 38999999999999999999999999987543 456678999888864311 0
Q ss_pred HHHhchHHHHHHHHHhhcCCCCccEEEeCCCchhH--HHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCc
Q 012645 82 FKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWA--LDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVP 159 (459)
Q Consensus 82 ~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~--~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 159 (459)
..+ ...+.+++++. +||+||+|...... ....+..+.+.+.+.-...
T Consensus 66 ~~d--~~~~~~~l~~~-----~~d~vV~D~y~~~~~~~~~~k~~~~~l~~iDD~~~------------------------ 114 (279)
T TIGR03590 66 YDD--ALELINLLEEE-----KFDILIVDHYGLDADWEKLIKEFGRKILVIDDLAD------------------------ 114 (279)
T ss_pred hhh--HHHHHHHHHhc-----CCCEEEEcCCCCCHHHHHHHHHhCCeEEEEecCCC------------------------
Confidence 000 01233344443 89999999865433 2233345566555432110
Q ss_pred ccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHH-HHHHHhcCCCeeeecc---cCCCc
Q 012645 160 LTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKE-LLRAMLGLWPLVMIGP---LVPSA 235 (459)
Q Consensus 160 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~vgp---~~~~~ 235 (459)
- ...+|.++..+.. .+.. +....+. ......|| ++.+.
T Consensus 115 --~----------------------------------~~~~D~vin~~~~-~~~~~y~~~~~~-~~~~l~G~~Y~~lr~e 156 (279)
T TIGR03590 115 --R----------------------------------PHDCDLLLDQNLG-ADASDYQGLVPA-NCRLLLGPSYALLREE 156 (279)
T ss_pred --C----------------------------------CcCCCEEEeCCCC-cCHhHhcccCcC-CCeEEecchHHhhhHH
Confidence 0 0012222211111 1100 0000000 12456665 32221
Q ss_pred cccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhC--CCcEEEEEeCCCCCCc
Q 012645 236 YLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKAS--EKPFLWVVKENENKLP 313 (459)
Q Consensus 236 ~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~--~~~~v~~~~~~~~~~~ 313 (459)
.. + ........+..+.|+|++|...... ....+++++... +.++.++++... ...
T Consensus 157 F~---------------~-----~~~~~~~~~~~~~iLi~~GG~d~~~--~~~~~l~~l~~~~~~~~i~vv~G~~~-~~~ 213 (279)
T TIGR03590 157 FY---------------Q-----LATANKRRKPLRRVLVSFGGADPDN--LTLKLLSALAESQINISITLVTGSSN-PNL 213 (279)
T ss_pred HH---------------H-----hhHhhhcccccCeEEEEeCCcCCcC--HHHHHHHHHhccccCceEEEEECCCC-cCH
Confidence 00 0 0000001112358999999765422 445566777653 456677776542 222
Q ss_pred hhhhhh--cCCCceEEeeecHH-HHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHH
Q 012645 314 VEFVNS--VGETGLVVRWCNQF-EVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKF 378 (459)
Q Consensus 314 ~~~~~~--~~~~v~v~~~~p~~-~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~r 378 (459)
+.+.+. ..+|+.+..++++. ++|+.+++ +|++|| +|+.|+++.|+|+|++|...+|..||+.
T Consensus 214 ~~l~~~~~~~~~i~~~~~~~~m~~lm~~aDl--~Is~~G-~T~~E~~a~g~P~i~i~~~~nQ~~~a~~ 278 (279)
T TIGR03590 214 DELKKFAKEYPNIILFIDVENMAELMNEADL--AIGAAG-STSWERCCLGLPSLAICLAENQQSNSQQ 278 (279)
T ss_pred HHHHHHHHhCCCEEEEeCHHHHHHHHHHCCE--EEECCc-hHHHHHHHcCCCEEEEEecccHHHHhhh
Confidence 222221 24689999999987 89988888 999999 9999999999999999999999999975
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.9e-14 Score=139.78 Aligned_cols=133 Identities=19% Similarity=0.282 Sum_probs=95.9
Q ss_pred CCcEEEEEeCCcccCCHHHHHHHHHHHHh-CCCcEEEEEeCCCCCCchhhh---hhcCCCceEEeeecHH-HHhcccCcc
Q 012645 268 EKSVIYVSFGSMADIAANQVDEIARGLKA-SEKPFLWVVKENENKLPVEFV---NSVGETGLVVRWCNQF-EVLAHQAVG 342 (459)
Q Consensus 268 ~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~-~~~~~v~~~~~~~~~~~~~~~---~~~~~~v~v~~~~p~~-~lL~~~~~~ 342 (459)
++++|++..|+.... ..+..+++++.. .+.+++++.+.. ..+.+.+. ...++|+++.+|+++. ++++.+++
T Consensus 201 ~~~~il~~~G~~~~~--k~~~~li~~l~~~~~~~~viv~G~~-~~~~~~l~~~~~~~~~~v~~~g~~~~~~~l~~~aD~- 276 (380)
T PRK13609 201 NKKILLIMAGAHGVL--GNVKELCQSLMSVPDLQVVVVCGKN-EALKQSLEDLQETNPDALKVFGYVENIDELFRVTSC- 276 (380)
T ss_pred CCcEEEEEcCCCCCC--cCHHHHHHHHhhCCCcEEEEEeCCC-HHHHHHHHHHHhcCCCcEEEEechhhHHHHHHhccE-
Confidence 455777777876532 234556666654 345666665532 11112221 1233689999999876 89988888
Q ss_pred ceeccCchhhHHHhhhcCCeeecc-ccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcCh
Q 012645 343 CFITHCGWNSILEGLSLGVAVVAV-PQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 343 ~~I~HGG~gs~~eal~~GvP~li~-P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
+|+.+|..|+.||+++|+|+|+. |....|..|+..+++. |+|... .+++.|.++|.++++|+
T Consensus 277 -~v~~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~~-G~~~~~-------~~~~~l~~~i~~ll~~~ 339 (380)
T PRK13609 277 -MITKPGGITLSEAAALGVPVILYKPVPGQEKENAMYFERK-GAAVVI-------RDDEEVFAKTEALLQDD 339 (380)
T ss_pred -EEeCCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHhC-CcEEEE-------CCHHHHHHHHHHHHCCH
Confidence 99999988999999999999885 6667778899999999 988643 35689999999999987
|
|
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.5e-13 Score=134.88 Aligned_cols=311 Identities=13% Similarity=0.091 Sum_probs=156.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCc--cccccCCCCceEEEcCCCCCCCCCCCCCCHHHHHHHHHHh
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHY--TVKSIHATTVGVEPISDGFDEGGFKQAPSVKAYLESFKTV 85 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (459)
|||+|++.++.||+.|.. ++++|+++++++.+++... ..+..-..++.++.++- ......+..+...
T Consensus 2 ~ki~i~~Ggt~G~i~~a~-l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----------~g~~~~~~~~~~~ 70 (380)
T PRK00025 2 LRIAIVAGEVSGDLLGAG-LIRALKARAPNLEFVGVGGPRMQAAGCESLFDMEELAV----------MGLVEVLPRLPRL 70 (380)
T ss_pred ceEEEEecCcCHHHHHHH-HHHHHHhcCCCcEEEEEccHHHHhCCCccccCHHHhhh----------ccHHHHHHHHHHH
Confidence 799999999999999999 9999999888877776433 11111112333332221 1111222221111
Q ss_pred --chHHHHHHHHHhhcCCCCccEEEeCCC-chhH--HHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCcc
Q 012645 86 --GSRTLAEVILKYKDSESPVNCIVYDSL-LTWA--LDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPL 160 (459)
Q Consensus 86 --~~~~~~~l~~~~~~~~~~~Dlvi~D~~-~~~~--~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 160 (459)
....+..+++++ +||+|+.-.. ..+. ..++++.|||++.+.....
T Consensus 71 ~~~~~~~~~~l~~~-----kPdivi~~~~~~~~~~~a~~a~~~~ip~i~~~~~~~------------------------- 120 (380)
T PRK00025 71 LKIRRRLKRRLLAE-----PPDVFIGIDAPDFNLRLEKKLRKAGIPTIHYVSPSV------------------------- 120 (380)
T ss_pred HHHHHHHHHHHHHc-----CCCEEEEeCCCCCCHHHHHHHHHCCCCEEEEeCCch-------------------------
Confidence 122344555554 8999876322 2333 3446788999887532110
Q ss_pred cCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcC-CCeeeecccCCCccccc
Q 012645 161 TLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGL-WPLVMIGPLVPSAYLDQ 239 (459)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~vgp~~~~~~~~~ 239 (459)
+. +. . ....+. .+..+.+++.+-...+ .+... -++.++|.......
T Consensus 121 -------~~------~~------~---~~~~~~---~~~~d~i~~~~~~~~~-----~~~~~g~~~~~~G~p~~~~~--- 167 (380)
T PRK00025 121 -------WA------WR------Q---GRAFKI---AKATDHVLALFPFEAA-----FYDKLGVPVTFVGHPLADAI--- 167 (380)
T ss_pred -------hh------cC------c---hHHHHH---HHHHhhheeCCccCHH-----HHHhcCCCeEEECcCHHHhc---
Confidence 00 00 0 000111 1122333333322111 11111 13667773322210
Q ss_pred cccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHh-----CCCcEEEEEeCCCCCCch
Q 012645 240 QIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKA-----SEKPFLWVVKENENKLPV 314 (459)
Q Consensus 240 ~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~-----~~~~~v~~~~~~~~~~~~ 314 (459)
...+.......-+.-.+++++|++..||...........+++++.. .+.+++++.+... ..+
T Consensus 168 -----------~~~~~~~~~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~~--~~~ 234 (380)
T PRK00025 168 -----------PLLPDRAAARARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVNPK--RRE 234 (380)
T ss_pred -----------ccccChHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCChh--hHH
Confidence 0001122232223322334566666676543212223444554433 2345666543211 111
Q ss_pred hhhhhc----CCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeecccccc--------chhhH-----HH
Q 012645 315 EFVNSV----GETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFS--------DQPTN-----AK 377 (459)
Q Consensus 315 ~~~~~~----~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~--------DQ~~n-----a~ 377 (459)
.+.+.. .-++.+.+- .-..+++.+|+ +|+.+|.+++ ||+++|+|+|++|-.. .|..| +.
T Consensus 235 ~~~~~~~~~~~~~v~~~~~-~~~~~~~~aDl--~v~~sG~~~l-Ea~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~ 310 (380)
T PRK00025 235 QIEEALAEYAGLEVTLLDG-QKREAMAAADA--ALAASGTVTL-ELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPN 310 (380)
T ss_pred HHHHHHhhcCCCCeEEEcc-cHHHHHHhCCE--EEECccHHHH-HHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHH
Confidence 222111 123333221 23478877888 9999998887 9999999999985321 22222 23
Q ss_pred HHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcCh
Q 012645 378 FVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 378 rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
.++.. +++..+... ..+++.|.+.+.++++|+
T Consensus 311 ~~~~~-~~~~~~~~~---~~~~~~l~~~i~~ll~~~ 342 (380)
T PRK00025 311 LLAGR-ELVPELLQE---EATPEKLARALLPLLADG 342 (380)
T ss_pred HhcCC-CcchhhcCC---CCCHHHHHHHHHHHhcCH
Confidence 33333 444444444 789999999999999998
|
|
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=4e-13 Score=131.86 Aligned_cols=134 Identities=23% Similarity=0.339 Sum_probs=95.8
Q ss_pred CCCcEEEEEeCCcccCCHHHHHHHHHHH-Hh-CCCcEEEEEeCCCCCCchhhhhh--cCCCceEEeeecHH-HHhcccCc
Q 012645 267 PEKSVIYVSFGSMADIAANQVDEIARGL-KA-SEKPFLWVVKENENKLPVEFVNS--VGETGLVVRWCNQF-EVLAHQAV 341 (459)
Q Consensus 267 ~~~~~V~vs~Gs~~~~~~~~~~~i~~a~-~~-~~~~~v~~~~~~~~~~~~~~~~~--~~~~v~v~~~~p~~-~lL~~~~~ 341 (459)
+++++|++..|+.... ..+..+++++ +. .+.+++++.+.+. .+.+.+.+. ..+++.+.+|+++. ++++.+|+
T Consensus 200 ~~~~~ilv~~G~lg~~--k~~~~li~~~~~~~~~~~~vvv~G~~~-~l~~~l~~~~~~~~~v~~~G~~~~~~~~~~~aDl 276 (391)
T PRK13608 200 PDKQTILMSAGAFGVS--KGFDTMITDILAKSANAQVVMICGKSK-ELKRSLTAKFKSNENVLILGYTKHMNEWMASSQL 276 (391)
T ss_pred CCCCEEEEECCCcccc--hhHHHHHHHHHhcCCCceEEEEcCCCH-HHHHHHHHHhccCCCeEEEeccchHHHHHHhhhE
Confidence 3456888888887631 2344455553 32 3456666655321 111222211 23578888999766 79988888
Q ss_pred cceeccCchhhHHHhhhcCCeeecc-ccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcCh
Q 012645 342 GCFITHCGWNSILEGLSLGVAVVAV-PQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 342 ~~~I~HGG~gs~~eal~~GvP~li~-P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
+|+..|..|+.||+++|+|+|++ |....|..|+..+++. |+|... -+.+++.++|.++++|+
T Consensus 277 --~I~k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~-G~g~~~-------~~~~~l~~~i~~ll~~~ 339 (391)
T PRK13608 277 --MITKPGGITISEGLARCIPMIFLNPAPGQELENALYFEEK-GFGKIA-------DTPEEAIKIVASLTNGN 339 (391)
T ss_pred --EEeCCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhC-CcEEEe-------CCHHHHHHHHHHHhcCH
Confidence 99998888999999999999998 6666677899999999 999653 25788999999999886
|
|
| >PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.55 E-value=3.3e-16 Score=134.83 Aligned_cols=136 Identities=21% Similarity=0.290 Sum_probs=97.2
Q ss_pred EEEEEeCCcccCC-HHHHHHHHHHHHh--CCCcEEEEEeCCC-CCCchhhhhhcCCCceEEeeec-HHHHhcccCcccee
Q 012645 271 VIYVSFGSMADIA-ANQVDEIARGLKA--SEKPFLWVVKENE-NKLPVEFVNSVGETGLVVRWCN-QFEVLAHQAVGCFI 345 (459)
Q Consensus 271 ~V~vs~Gs~~~~~-~~~~~~i~~a~~~--~~~~~v~~~~~~~-~~~~~~~~~~~~~~v~v~~~~p-~~~lL~~~~~~~~I 345 (459)
+|+|+.||..... ...+..+...+.. ...+++++.+... ......+ .....++.+.+|++ ..++++.+|+ +|
T Consensus 1 tilv~gGs~g~~~l~~~v~~~~~~~~~~~~~~~viv~~G~~~~~~~~~~~-~~~~~~v~~~~~~~~m~~~m~~aDl--vI 77 (167)
T PF04101_consen 1 TILVTGGSQGARDLNRLVLKILELLAEKHKNIQVIVQTGKNNYEELKIKV-ENFNPNVKVFGFVDNMAELMAAADL--VI 77 (167)
T ss_dssp -EEEEETTTSHHHHHCCCCCHHHHHHHHHHHCCCCCCCTTCECHHHCCCH-CCTTCCCEEECSSSSHHHHHHHHSE--EE
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHhhcCCCcEEEEEECCCcHHHHHHHH-hccCCcEEEEechhhHHHHHHHcCE--EE
Confidence 5899999875311 1112222333222 2467888777542 1111111 11236899999999 6699988988 99
Q ss_pred ccCchhhHHHhhhcCCeeecccccc----chhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcCh
Q 012645 346 THCGWNSILEGLSLGVAVVAVPQFS----DQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 346 ~HGG~gs~~eal~~GvP~li~P~~~----DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
||||.||+.|++++|+|+|++|... +|..||..+++. |+|..+... ..+.+.|.+.|.++++++
T Consensus 78 s~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~-g~~~~~~~~---~~~~~~L~~~i~~l~~~~ 145 (167)
T PF04101_consen 78 SHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKK-GAAIMLDES---ELNPEELAEAIEELLSDP 145 (167)
T ss_dssp ECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHC-CCCCCSECC---C-SCCCHHHHHHCHCCCH
T ss_pred eCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHc-CCccccCcc---cCCHHHHHHHHHHHHcCc
Confidence 9999999999999999999999988 999999999999 999999987 788999999999999987
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B. |
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.4e-11 Score=120.79 Aligned_cols=141 Identities=18% Similarity=0.193 Sum_probs=95.3
Q ss_pred hhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHh---------CCCcEEEEEeCCCCCCchhhhhh-cCCCceEEe
Q 012645 259 CMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKA---------SEKPFLWVVKENENKLPVEFVNS-VGETGLVVR 328 (459)
Q Consensus 259 l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~---------~~~~~v~~~~~~~~~~~~~~~~~-~~~~v~v~~ 328 (459)
+.+-+.-.+++++|++..|+..... +..+++++.. .+..++++++.+. .+.+.+.+. ...++++.+
T Consensus 196 ~r~~~gl~~~~~~il~~Gg~~g~~~---~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~-~~~~~L~~~~~~~~v~~~G 271 (382)
T PLN02605 196 LRRELGMDEDLPAVLLMGGGEGMGP---LEETARALGDSLYDKNLGKPIGQVVVICGRNK-KLQSKLESRDWKIPVKVRG 271 (382)
T ss_pred HHHHcCCCCCCcEEEEECCCccccc---HHHHHHHHHHhhccccccCCCceEEEEECCCH-HHHHHHHhhcccCCeEEEe
Confidence 4433333345567777666654322 2223333322 2345566665431 111122211 134688889
Q ss_pred eecHH-HHhcccCccceeccCchhhHHHhhhcCCeeeccccccchh-hHHHHHHHhhhceEEeeecCCCcccHHHHHHHH
Q 012645 329 WCNQF-EVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQP-TNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCV 406 (459)
Q Consensus 329 ~~p~~-~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~-~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i 406 (459)
|+++. ++++.+|+ +|+.+|.+|+.||+++|+|+|+.+....|. .|+..+.+. |.|... -+++.|.++|
T Consensus 272 ~~~~~~~l~~aaDv--~V~~~g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i~~~-g~g~~~-------~~~~~la~~i 341 (382)
T PLN02605 272 FVTNMEEWMGACDC--IITKAGPGTIAEALIRGLPIILNGYIPGQEEGNVPYVVDN-GFGAFS-------ESPKEIARIV 341 (382)
T ss_pred ccccHHHHHHhCCE--EEECCCcchHHHHHHcCCCEEEecCCCccchhhHHHHHhC-Cceeec-------CCHHHHHHHH
Confidence 99866 89988888 999999999999999999999998766675 799999999 998643 4688999999
Q ss_pred HHHhcC-h
Q 012645 407 NEVMDG-E 413 (459)
Q Consensus 407 ~~ll~~-~ 413 (459)
.++++| +
T Consensus 342 ~~ll~~~~ 349 (382)
T PLN02605 342 AEWFGDKS 349 (382)
T ss_pred HHHHcCCH
Confidence 999987 5
|
|
| >PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.48 E-value=5.3e-14 Score=117.17 Aligned_cols=122 Identities=22% Similarity=0.268 Sum_probs=81.7
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcCCCCCCCCCCCCCCHHHHHHHHHHh--ch
Q 012645 10 VLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDEGGFKQAPSVKAYLESFKTV--GS 87 (459)
Q Consensus 10 il~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 87 (459)
|+|++.|+.||++|+++||++|++|||+|++++++.+.+.+++.|++|++++.. ... ................ ..
T Consensus 1 Ili~~~Gt~Ghv~P~lala~~L~~rGh~V~~~~~~~~~~~v~~~Gl~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~ 77 (139)
T PF03033_consen 1 ILIATGGTRGHVYPFLALARALRRRGHEVRLATPPDFRERVEAAGLEFVPIPGD--SRL-PRSLEPLANLRRLARLIRGL 77 (139)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHTT-EEEEEETGGGHHHHHHTT-EEEESSSC--GGG-GHHHHHHHHHHCHHHHHHHH
T ss_pred CEEEEcCChhHHHHHHHHHHHHhccCCeEEEeecccceecccccCceEEEecCC--cCc-CcccchhhhhhhHHHHhhhh
Confidence 789999999999999999999999999999999999999999999999999754 000 0000011111111111 00
Q ss_pred HHHHHHHHHhh-----c--CCCCccEEEeCCCchhHHHHHHHcCCceEEEccch
Q 012645 88 RTLAEVILKYK-----D--SESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNS 134 (459)
Q Consensus 88 ~~~~~l~~~~~-----~--~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~ 134 (459)
..+...++... . .....|+++.+.....+..+|+++|||++.....|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~vaE~~~iP~~~~~~~p 131 (139)
T PF03033_consen 78 EEAMRILARFRPDLVVAAGGYVADDVIIAAPLAFAAALVAEQLGIPGVANRLFP 131 (139)
T ss_dssp HHHHHHHHHHHHCCCCHCTTTTECCEECHHHHHTHHHHHHHHHTS-EEEEESSG
T ss_pred hHHHHHhhccCcchhhhccCcccchHHHhhhhcCccceeEhhhCchHHHHhhCC
Confidence 11112222211 1 11257888889888889999999999999988766
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B .... |
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.2e-10 Score=113.83 Aligned_cols=318 Identities=17% Similarity=0.080 Sum_probs=168.2
Q ss_pred HHHHHHHHHHHh--CCCeEE---EEecCcccc--ccCCCCceEEEcCCCCCCCCCCCCCCHHHHHHHHHH-hchHHH--H
Q 012645 22 NPLLQFAKRLAS--KRVKAT---LATTHYTVK--SIHATTVGVEPISDGFDEGGFKQAPSVKAYLESFKT-VGSRTL--A 91 (459)
Q Consensus 22 ~p~~~la~~L~~--~Gh~V~---~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~ 91 (459)
.=.++||++|++ .|++|. +++.....+ .+...| .+..+|. +... .......+..... .....+ .
T Consensus 11 ~~a~ai~~~l~~~~~~~~v~~~p~vG~~~~~e~~~ip~~g-~~~~~~s----gg~~-~~~~~~~~~~~~~gl~~~~~~~~ 84 (396)
T TIGR03492 11 LIAARIAKALLQLSPDLNLEALPLVGEGRAYQNLGIPIIG-PTKELPS----GGFS-YQSLRGLLRDLRAGLVGLTLGQW 84 (396)
T ss_pred HHHHHHHHHHHhhCCCCCeEEeCcccCCHHHhhCCCceeC-CCCCCCC----CCcc-CCCHHHHHHHHHhhHHHHHHHHH
Confidence 345778999988 699999 999875432 233345 5555552 2111 1233344443333 222211 1
Q ss_pred HHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCcccCCCCCCCCCC
Q 012645 92 EVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPGLPSLASS 171 (459)
Q Consensus 92 ~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~ 171 (459)
.+++++ ..+||+||.=--+. ...+|...|+|++++.+.-.-. .+......+.+ +-+..+||.
T Consensus 85 ~~~~~~---~~~p~~v~~~Gg~v-~~~aA~~~~~p~~~~~~~esn~------~~~~~~~~~~~--~~~~~~~G~------ 146 (396)
T TIGR03492 85 RALRKW---AKKGDLIVAVGDIV-PLLFAWLSGKPYAFVGTAKSDY------YWESGPRRSPS--DEYHRLEGS------ 146 (396)
T ss_pred HHHHHH---hhcCCEEEEECcHH-HHHHHHHcCCCceEEEeeccce------eecCCCCCccc--hhhhccCCC------
Confidence 233333 23789998654444 8888999999999965532100 00000000000 000001111
Q ss_pred CCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcC-CCeeeecc-cCCCccccccccCCccCCC
Q 012645 172 DLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGL-WPLVMIGP-LVPSAYLDQQIAGDSAYGA 249 (459)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~vgp-~~~~~~~~~~~~~~~~~g~ 249 (459)
.+..| + ..+. ..+.++.+.+++-. .. +.+... -++.++|. +......
T Consensus 147 ----------~~~p~-e-~n~l--~~~~a~~v~~~~~~--t~---~~l~~~g~k~~~vGnPv~d~l~~------------ 195 (396)
T TIGR03492 147 ----------LYLPW-E-RWLM--RSRRCLAVFVRDRL--TA---RDLRRQGVRASYLGNPMMDGLEP------------ 195 (396)
T ss_pred ----------ccCHH-H-HHHh--hchhhCEEeCCCHH--HH---HHHHHCCCeEEEeCcCHHhcCcc------------
Confidence 11112 1 0111 11334555544422 21 223221 26999994 4433100
Q ss_pred CCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhC----CCcEEEEEeCCC--CCCchhhhh-hc--
Q 012645 250 NIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKAS----EKPFLWVVKENE--NKLPVEFVN-SV-- 320 (459)
Q Consensus 250 ~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~----~~~~v~~~~~~~--~~~~~~~~~-~~-- 320 (459)
. .. .-+ .++++.|.+--||....-...+..+++++..+ +..+++.+.... ..+...+.+ ..
T Consensus 196 ----~-~~---~~l--~~~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~~~~~~v~~~~~~~~~~~~~~~l~~~g~~~ 265 (396)
T TIGR03492 196 ----P-ER---KPL--LTGRFRIALLPGSRPPEAYRNLKLLLRALEALPDSQPFVFLAAIVPSLSLEKLQAILEDLGWQL 265 (396)
T ss_pred ----c-cc---ccc--CCCCCEEEEECCCCHHHHHccHHHHHHHHHHHhhCCCeEEEEEeCCCCCHHHHHHHHHhcCcee
Confidence 0 00 011 12345888888987543333344555555553 566777763321 111111110 00
Q ss_pred ------------CCCceEEeeecH-HHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHh---hh
Q 012645 321 ------------GETGLVVRWCNQ-FEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEV---WE 384 (459)
Q Consensus 321 ------------~~~v~v~~~~p~-~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~---~G 384 (459)
.+++.+..+..+ .++++.+++ +|+-.|..| .|++..|+|+|++|....|. ||...++. .|
T Consensus 266 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~ADl--vI~rSGt~T-~E~a~lg~P~Ilip~~~~q~-na~~~~~~~~l~g 341 (396)
T TIGR03492 266 EGSSEDQTSLFQKGTLEVLLGRGAFAEILHWADL--GIAMAGTAT-EQAVGLGKPVIQLPGKGPQF-TYGFAEAQSRLLG 341 (396)
T ss_pred cCCccccchhhccCceEEEechHhHHHHHHhCCE--EEECcCHHH-HHHHHhCCCEEEEeCCCCHH-HHHHHHhhHhhcC
Confidence 123455555544 489988888 999999766 99999999999999766675 98776662 15
Q ss_pred ceEEeeecCCCcccHHHHHHHHHHHhcCh
Q 012645 385 VGVRAKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 385 ~G~~~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
.+..+. ..+.+.|.+++.++++|+
T Consensus 342 ~~~~l~-----~~~~~~l~~~l~~ll~d~ 365 (396)
T TIGR03492 342 GSVFLA-----SKNPEQAAQVVRQLLADP 365 (396)
T ss_pred CEEecC-----CCCHHHHHHHHHHHHcCH
Confidence 455554 455699999999999987
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.1e-09 Score=106.14 Aligned_cols=316 Identities=15% Similarity=0.097 Sum_probs=164.5
Q ss_pred EEEEEcC---CC-ccCHHHHHHHHHHHHhCCCeEEEEecCccccccCC-CCceEEEcCCCCCCCCCCCCCCHHHHHHHHH
Q 012645 9 HVLVLTY---PA-QGHINPLLQFAKRLASKRVKATLATTHYTVKSIHA-TTVGVEPISDGFDEGGFKQAPSVKAYLESFK 83 (459)
Q Consensus 9 kil~~~~---~~-~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (459)
||++++. |. .|+...+..|+++|+++||+|++++.......-.. ....+...+..... .......
T Consensus 1 kIl~i~~~~~p~~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~--- 70 (364)
T cd03814 1 RIAIVTDTFLPQVNGVVRTLQRLVEHLRARGHEVLVIAPGPFRESEGPARVVPVPSVPLPGYP-------EIRLALP--- 70 (364)
T ss_pred CeEEEecccCccccceehHHHHHHHHHHHCCCEEEEEeCCchhhccCCCCceeecccccCccc-------ceEeccc---
Confidence 4566552 33 79999999999999999999999998754322111 11111111100000 0000000
Q ss_pred HhchHHHHHHHHHhhcCCCCccEEEeCCCc---hhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCcc
Q 012645 84 TVGSRTLAEVILKYKDSESPVNCIVYDSLL---TWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPL 160 (459)
Q Consensus 84 ~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~---~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 160 (459)
....+...++.. +||+|+++... ..+..++++.++|++...+...... ...
T Consensus 71 --~~~~~~~~~~~~-----~pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~---------------- 124 (364)
T cd03814 71 --PRRRVRRLLDAF-----APDVVHIATPGPLGLAALRAARRLGIPVVTSYHTDFPEY---LRY---------------- 124 (364)
T ss_pred --chhhHHHHHHhc-----CCCEEEEeccchhhHHHHHHHHHcCCCEEEEEecChHHH---hhh----------------
Confidence 011233333433 89999876433 2356778889999988655331100 000
Q ss_pred cCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcCCCeeeecccCCCcccccc
Q 012645 161 TLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAYLDQQ 240 (459)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vgp~~~~~~~~~~ 240 (459)
. .... .........+. .....+.+++.+....+. ... ....++..+.+.+....+..
T Consensus 125 -------~----~~~~------~~~~~~~~~~~--~~~~~d~i~~~s~~~~~~-~~~--~~~~~~~~~~~g~~~~~~~~- 181 (364)
T cd03814 125 -------Y----GLGP------LSWLAWAYLRW--FHNRADRVLVPSPSLADE-LRA--RGFRRVRLWPRGVDTELFHP- 181 (364)
T ss_pred -------c----ccch------HhHhhHHHHHH--HHHhCCEEEeCCHHHHHH-Hhc--cCCCceeecCCCccccccCc-
Confidence 0 0000 00010111111 124567777776654431 110 11123333333222211100
Q ss_pred ccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCccc-CCHHHHHHHHHHHHh-CCCcEEEEEeCCCCCCchhhhh
Q 012645 241 IAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMAD-IAANQVDEIARGLKA-SEKPFLWVVKENENKLPVEFVN 318 (459)
Q Consensus 241 ~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~-~~~~~~~~i~~a~~~-~~~~~v~~~~~~~~~~~~~~~~ 318 (459)
..........+- ..++.+++..|+... -..+.+..++..+.. .+..+++...... .+.+.
T Consensus 182 -----------~~~~~~~~~~~~---~~~~~~i~~~G~~~~~k~~~~~i~~~~~l~~~~~~~l~i~G~~~~---~~~~~- 243 (364)
T cd03814 182 -----------RRRDEALRARLG---PPDRPVLLYVGRLAPEKNLEALLDADLPLRRRPPVRLVIVGDGPA---RARLE- 243 (364)
T ss_pred -----------ccccHHHHHHhC---CCCCeEEEEEeccccccCHHHHHHHHHHhhhcCCceEEEEeCCch---HHHHh-
Confidence 000011112221 223466777777643 223333333333332 2345554443221 11111
Q ss_pred hcCCCceEEeeecHHH---HhcccCccceeccCc----hhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeee
Q 012645 319 SVGETGLVVRWCNQFE---VLAHQAVGCFITHCG----WNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKK 391 (459)
Q Consensus 319 ~~~~~v~v~~~~p~~~---lL~~~~~~~~I~HGG----~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~ 391 (459)
....|+.+.+++++.+ +++.+++ +|+.+. .+++.||+++|+|+|+.+.. .+...++.. +.|....
T Consensus 244 ~~~~~v~~~g~~~~~~~~~~~~~~d~--~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~----~~~~~i~~~-~~g~~~~- 315 (364)
T cd03814 244 ARYPNVHFLGFLDGEELAAAYASADV--FVFPSRTETFGLVVLEAMASGLPVVAPDAG----GPADIVTDG-ENGLLVE- 315 (364)
T ss_pred ccCCcEEEEeccCHHHHHHHHHhCCE--EEECcccccCCcHHHHHHHcCCCEEEcCCC----CchhhhcCC-cceEEcC-
Confidence 2457899999998764 7877777 886654 37899999999999987754 355667777 8887776
Q ss_pred cCCCcccHHHHHHHHHHHhcCh
Q 012645 392 NRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 392 ~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
..+.+++.+++.++++|+
T Consensus 316 ----~~~~~~l~~~i~~l~~~~ 333 (364)
T cd03814 316 ----PGDAEAFAAALAALLADP 333 (364)
T ss_pred ----CCCHHHHHHHHHHHHcCH
Confidence 467788999999999987
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.8e-09 Score=108.75 Aligned_cols=336 Identities=14% Similarity=0.059 Sum_probs=169.8
Q ss_pred CCCcEEEEEcCCC-----ccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcCCC-CCCCCCCCCCCHHHH
Q 012645 5 RERVHVLVLTYPA-----QGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDG-FDEGGFKQAPSVKAY 78 (459)
Q Consensus 5 ~~~~kil~~~~~~-----~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~ 78 (459)
+++|||+++..++ .|=-..+..+++.|.++||+|++++....... +..|+..+..... ++. .....
T Consensus 56 ~~~mrI~~~~~~~~~~~~gG~~~~~~~l~~~L~~~G~eV~vlt~~~~~~~-~~~g~~v~~~~~~~~~~-----~~~~~-- 127 (465)
T PLN02871 56 SRPRRIALFVEPSPFSYVSGYKNRFQNFIRYLREMGDEVLVVTTDEGVPQ-EFHGAKVIGSWSFPCPF-----YQKVP-- 127 (465)
T ss_pred CCCceEEEEECCcCCcccccHHHHHHHHHHHHHHCCCeEEEEecCCCCCc-cccCceeeccCCcCCcc-----CCCce--
Confidence 6789999986543 34456889999999999999999998643211 1124433322110 000 00000
Q ss_pred HHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCc---hhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCC
Q 012645 79 LESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLL---TWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQ 155 (459)
Q Consensus 79 ~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~---~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~ 155 (459)
..+ .....+..++++. +||+|.+.... ..+..+++.+|+|+|...+......
T Consensus 128 -~~~--~~~~~l~~~i~~~-----kpDiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~~~~----------------- 182 (465)
T PLN02871 128 -LSL--ALSPRIISEVARF-----KPDLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHVPVY----------------- 182 (465)
T ss_pred -eec--cCCHHHHHHHHhC-----CCCEEEECCCchhHHHHHHHHHHhCCCEEEEEecCchhh-----------------
Confidence 000 0111233444443 89999765432 2345567889999998654321000
Q ss_pred CCCcccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHH-hcCCCeeeecccCCC
Q 012645 156 ETVPLTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAM-LGLWPLVMIGPLVPS 234 (459)
Q Consensus 156 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~vgp~~~~ 234 (459)
.+. .. . ........ .+.+. ..+.++.+++.+....+. ..... ....++..+..-++.
T Consensus 183 ------~~~---~~---~------~~~~~~~~-~~~r~--~~~~ad~ii~~S~~~~~~-l~~~~~~~~~kv~vi~nGvd~ 240 (465)
T PLN02871 183 ------IPR---YT---F------SWLVKPMW-DIIRF--LHRAADLTLVTSPALGKE-LEAAGVTAANRIRVWNKGVDS 240 (465)
T ss_pred ------hhc---cc---c------hhhHHHHH-HHHHH--HHhhCCEEEECCHHHHHH-HHHcCCCCcCeEEEeCCccCc
Confidence 000 00 0 00000111 11111 124567777666443222 11111 001123322221211
Q ss_pred ccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhC-CCcEEEEEeCCCCCCc
Q 012645 235 AYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKAS-EKPFLWVVKENENKLP 313 (459)
Q Consensus 235 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~-~~~~v~~~~~~~~~~~ 313 (459)
..+.. .....+...-+....++.++++..|+... ...+..++++++.. +.+++++..+ ...
T Consensus 241 ~~f~p-------------~~~~~~~~~~~~~~~~~~~~i~~vGrl~~--~K~~~~li~a~~~~~~~~l~ivG~G---~~~ 302 (465)
T PLN02871 241 ESFHP-------------RFRSEEMRARLSGGEPEKPLIVYVGRLGA--EKNLDFLKRVMERLPGARLAFVGDG---PYR 302 (465)
T ss_pred cccCC-------------ccccHHHHHHhcCCCCCCeEEEEeCCCch--hhhHHHHHHHHHhCCCcEEEEEeCC---hHH
Confidence 10000 00111122222111222356667788653 23455567777664 4555544332 222
Q ss_pred hhhhhhc-CCCceEEeeecHH---HHhcccCccceeccCc----hhhHHHhhhcCCeeeccccccchhhHHHHHHH---h
Q 012645 314 VEFVNSV-GETGLVVRWCNQF---EVLAHQAVGCFITHCG----WNSILEGLSLGVAVVAVPQFSDQPTNAKFVEE---V 382 (459)
Q Consensus 314 ~~~~~~~-~~~v~v~~~~p~~---~lL~~~~~~~~I~HGG----~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~---~ 382 (459)
+.+.+.. ..+|.+.+++|+. .+++.+|+ +|.-.. ..++.||+++|+|+|+.... .....++. -
T Consensus 303 ~~l~~~~~~~~V~f~G~v~~~ev~~~~~~aDv--~V~pS~~E~~g~~vlEAmA~G~PVI~s~~g----g~~eiv~~~~~~ 376 (465)
T PLN02871 303 EELEKMFAGTPTVFTGMLQGDELSQAYASGDV--FVMPSESETLGFVVLEAMASGVPVVAARAG----GIPDIIPPDQEG 376 (465)
T ss_pred HHHHHHhccCCeEEeccCCHHHHHHHHHHCCE--EEECCcccccCcHHHHHHHcCCCEEEcCCC----CcHhhhhcCCCC
Confidence 2222211 3578888999855 47877887 775432 34788999999999976543 23344455 5
Q ss_pred hhceEEeeecCCCcccHHHHHHHHHHHhcChh-hHHHHHHHHHH
Q 012645 383 WEVGVRAKKNRAGIVTGEELNKCVNEVMDGER-SQKIKRNVSKW 425 (459)
Q Consensus 383 ~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~-~~~~~~~a~~l 425 (459)
+.|..++ .-+++++.++|.++++|++ .+.+.+++++.
T Consensus 377 -~~G~lv~-----~~d~~~la~~i~~ll~~~~~~~~~~~~a~~~ 414 (465)
T PLN02871 377 -KTGFLYT-----PGDVDDCVEKLETLLADPELRERMGAAAREE 414 (465)
T ss_pred -CceEEeC-----CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 6777776 3578999999999999872 13344444443
|
|
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.34 E-value=3.4e-09 Score=102.47 Aligned_cols=131 Identities=17% Similarity=0.128 Sum_probs=82.4
Q ss_pred CCcEEEEEeCCcccCCHHHHHHHHHHHHh---CCCcEEEEEeCCCCCCchhhhhhcCCCceEEeeecHH---HHhcccCc
Q 012645 268 EKSVIYVSFGSMADIAANQVDEIARGLKA---SEKPFLWVVKENENKLPVEFVNSVGETGLVVRWCNQF---EVLAHQAV 341 (459)
Q Consensus 268 ~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~---~~~~~v~~~~~~~~~~~~~~~~~~~~~v~v~~~~p~~---~lL~~~~~ 341 (459)
.++.+++..|+..... ....++++++. .+.++++...... ............++.+.+++++. .+++.+++
T Consensus 189 ~~~~~i~~~G~~~~~k--~~~~li~~~~~l~~~~~~l~i~G~~~~-~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~ 265 (359)
T cd03823 189 GGRLRFGFIGQLTPHK--GVDLLLEAFKRLPRGDIELVIVGNGLE-LEEESYELEGDPRVEFLGAYPQEEIDDFYAEIDV 265 (359)
T ss_pred CCceEEEEEecCcccc--CHHHHHHHHHHHHhcCcEEEEEcCchh-hhHHHHhhcCCCeEEEeCCCCHHHHHHHHHhCCE
Confidence 3446777788865321 23334444443 3555555433221 11011111234788899999755 46877777
Q ss_pred cceec----cCch-hhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcCh
Q 012645 342 GCFIT----HCGW-NSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 342 ~~~I~----HGG~-gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
+|+ ..|. .++.||+++|+|+|+.+. ......++.. +.|.... .-+.+++.+++.++++|+
T Consensus 266 --~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~~-~~g~~~~-----~~d~~~l~~~i~~l~~~~ 330 (359)
T cd03823 266 --LVVPSIWPENFPLVIREALAAGVPVIASDI----GGMAELVRDG-VNGLLFP-----PGDAEDLAAALERLIDDP 330 (359)
T ss_pred --EEEcCcccCCCChHHHHHHHCCCCEEECCC----CCHHHHhcCC-CcEEEEC-----CCCHHHHHHHHHHHHhCh
Confidence 773 2344 479999999999998654 3456666666 6787776 456899999999999987
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.7e-09 Score=105.65 Aligned_cols=331 Identities=17% Similarity=0.076 Sum_probs=165.5
Q ss_pred EEEEEcCCC----ccCHHHHHHHHHHHHhCCCeEEEEecCccccccC---------CCCceEEEcCCCCCCCCCCCCCCH
Q 012645 9 HVLVLTYPA----QGHINPLLQFAKRLASKRVKATLATTHYTVKSIH---------ATTVGVEPISDGFDEGGFKQAPSV 75 (459)
Q Consensus 9 kil~~~~~~----~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~---------~~g~~~~~~~~~~~~~~~~~~~~~ 75 (459)
||++++... .|+......++++|+++||+|++++......... ..++.+..++..... ....
T Consensus 1 kIl~i~~~~~~~~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 75 (394)
T cd03794 1 KILILSQYFPPELGGGAFRTTELAEELVKRGHEVTVITGSPNYPSGKIYKGYKREEVDGVRVHRVPLPPYK-----KNGL 75 (394)
T ss_pred CEEEEecccCCccCCcceeHHHHHHHHHhCCceEEEEecCCCcccccccccceEEecCCeEEEEEecCCCC-----ccch
Confidence 567776532 5899999999999999999999998765433322 146666665532111 1111
Q ss_pred HHHHHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCc----hhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCC
Q 012645 76 KAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLL----TWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTL 151 (459)
Q Consensus 76 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~----~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 151 (459)
...+.............+.. ...+||+|++.... ..+..++...++|++...+...... .
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~----~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~-~----------- 139 (394)
T cd03794 76 LKRLLNYLSFALSALLALLK----RRRRPDVIIATSPPLLIALAALLLARLKGAPFVLEVRDLWPES-A----------- 139 (394)
T ss_pred HHHHHhhhHHHHHHHHHHHh----cccCCCEEEEcCChHHHHHHHHHHHHhcCCCEEEEehhhcchh-H-----------
Confidence 11111111111112222221 12389999988622 2234556667999988755321000 0
Q ss_pred CCCCCCCcccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcCCCeeeeccc
Q 012645 152 PVNQETVPLTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPL 231 (459)
Q Consensus 152 p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vgp~ 231 (459)
...... ............+.+. .+..++.+++.+-...+.-. .......++..+...
T Consensus 140 ----------------~~~~~~----~~~~~~~~~~~~~~~~--~~~~~d~vi~~s~~~~~~~~-~~~~~~~~~~~i~~~ 196 (394)
T cd03794 140 ----------------VALGLL----KNGSLLYRLLRKLERL--IYRRADAIVVISPGMREYLV-RRGVPPEKISVIPNG 196 (394)
T ss_pred ----------------HHccCc----cccchHHHHHHHHHHH--HHhcCCEEEEECHHHHHHHH-hcCCCcCceEEcCCC
Confidence 000000 0000000111111111 23456777776655433211 011111234444433
Q ss_pred CCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCccc-CCHHHHHHHHHHHHhC-CCcEEEEEeCCC
Q 012645 232 VPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMAD-IAANQVDEIARGLKAS-EKPFLWVVKENE 309 (459)
Q Consensus 232 ~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~-~~~~~~~~i~~a~~~~-~~~~v~~~~~~~ 309 (459)
+....+.. ........... ...++.+++..|+... ...+.+...+..+... +.++++. +..
T Consensus 197 ~~~~~~~~-------------~~~~~~~~~~~--~~~~~~~i~~~G~~~~~k~~~~l~~~~~~l~~~~~~~l~i~-G~~- 259 (394)
T cd03794 197 VDLELFKP-------------PPADESLRKEL--GLDDKFVVLYAGNIGRAQGLDTLLEAAALLKDRPDIRFLIV-GDG- 259 (394)
T ss_pred CCHHHcCC-------------ccchhhhhhcc--CCCCcEEEEEecCcccccCHHHHHHHHHHHhhcCCeEEEEe-CCc-
Confidence 32210000 00000011111 1234477777888653 2233333333433333 4455444 322
Q ss_pred CCCchhhh----hhcCCCceEEeeecHH---HHhcccCccceeccCc---------hhhHHHhhhcCCeeeccccccchh
Q 012645 310 NKLPVEFV----NSVGETGLVVRWCNQF---EVLAHQAVGCFITHCG---------WNSILEGLSLGVAVVAVPQFSDQP 373 (459)
Q Consensus 310 ~~~~~~~~----~~~~~~v~v~~~~p~~---~lL~~~~~~~~I~HGG---------~gs~~eal~~GvP~li~P~~~DQ~ 373 (459)
...+.+. ....+|+.+.+++++. .+++.+++ +|.... -+++.||+++|+|+|+.+....+.
T Consensus 260 -~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di--~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~ 336 (394)
T cd03794 260 -PEKEELKELAKALGLDNVTFLGRVPKEELPELLAAADV--GLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAE 336 (394)
T ss_pred -ccHHHHHHHHHHcCCCcEEEeCCCChHHHHHHHHhhCe--eEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchh
Confidence 1112221 1234789999999866 46777777 664322 234799999999999988665433
Q ss_pred hHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcCh
Q 012645 374 TNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 374 ~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
.+... +.|..++ .-+.+++.++|.++++|+
T Consensus 337 ----~~~~~-~~g~~~~-----~~~~~~l~~~i~~~~~~~ 366 (394)
T cd03794 337 ----LVEEA-GAGLVVP-----PGDPEALAAAILELLDDP 366 (394)
T ss_pred ----hhccC-CcceEeC-----CCCHHHHHHHHHHHHhCh
Confidence 33343 5565555 457899999999999886
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.8e-08 Score=99.30 Aligned_cols=323 Identities=15% Similarity=0.087 Sum_probs=165.4
Q ss_pred CccCHHHHHHHHHHHHhCCCeEEEEecCccccc----cCCCCceEEEcCCCCCCCCCCCCCCHHHHHHHHHHhchHHHHH
Q 012645 17 AQGHINPLLQFAKRLASKRVKATLATTHYTVKS----IHATTVGVEPISDGFDEGGFKQAPSVKAYLESFKTVGSRTLAE 92 (459)
Q Consensus 17 ~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (459)
..|.-..+..|+++|+++||+|++++....... ....++.++.++...... . .. ......+. .....
T Consensus 20 ~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~--~~~~~~~~----~~~~~ 90 (398)
T cd03800 20 TGGQNVYVLELARALARLGHEVDIFTRRIDDALPPIVELAPGVRVVRVPAGPAEY--L-PK--EELWPYLD----EFADD 90 (398)
T ss_pred CCceeehHHHHHHHHhccCceEEEEEecCCcccCCccccccceEEEecccccccC--C-Ch--hhcchhHH----HHHHH
Confidence 357778999999999999999999986433222 122477777665211110 0 00 00111111 11122
Q ss_pred HHHHhhcCCCCccEEEeCCCc--hhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCcccCCCCCCCCC
Q 012645 93 VILKYKDSESPVNCIVYDSLL--TWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPGLPSLAS 170 (459)
Q Consensus 93 l~~~~~~~~~~~Dlvi~D~~~--~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~ 170 (459)
+++.+.....+||+|+++... ..+..+++.+|+|+|...+... . ...
T Consensus 91 ~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~---------------------------~----~~~ 139 (398)
T cd03800 91 LLRFLRREGGRPDLIHAHYWDSGLVALLLARRLGIPLVHTFHSLG---------------------------A----VKR 139 (398)
T ss_pred HHHHHHhcCCCccEEEEecCccchHHHHHHhhcCCceEEEeeccc---------------------------c----cCC
Confidence 222222211379999987543 3466778899999887544210 0 000
Q ss_pred CCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcCCCeeeecccCCCccccccccCCccCCCC
Q 012645 171 SDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAYLDQQIAGDSAYGAN 250 (459)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vgp~~~~~~~~~~~~~~~~~g~~ 250 (459)
...... .. .... .........+..++.+++.+....+...........++..+.+.+....+...
T Consensus 140 ~~~~~~---~~-~~~~-~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~~vi~ng~~~~~~~~~---------- 204 (398)
T cd03800 140 RHLGAA---DT-YEPA-RRIEAEERLLRAADRVIASTPQEAEELYSLYGAYPRRIRVVPPGVDLERFTPY---------- 204 (398)
T ss_pred cccccc---cc-cchh-hhhhHHHHHHhhCCEEEEcCHHHHHHHHHHccccccccEEECCCCCccceecc----------
Confidence 000000 00 0000 00111111235677777777654332111111111224444443322111000
Q ss_pred CCCCChhh-hhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHh-----CCCcEEEEEeCCCCCCch---h---hhh
Q 012645 251 IWEPTGDQ-CMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKA-----SEKPFLWVVKENENKLPV---E---FVN 318 (459)
Q Consensus 251 ~~~~~~~~-l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~-----~~~~~v~~~~~~~~~~~~---~---~~~ 318 (459)
..... ...+. . +++..+++..|+.... .....+++++.. .+.+++++.+........ . +.+
T Consensus 205 ---~~~~~~~~~~~-~-~~~~~~i~~~gr~~~~--k~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~ 277 (398)
T cd03800 205 ---GRAEARRARLL-R-DPDKPRILAVGRLDPR--KGIDTLIRAYAELPELRERANLVIVGGPRDDILAMDEEELRELAR 277 (398)
T ss_pred ---cchhhHHHhhc-c-CCCCcEEEEEcccccc--cCHHHHHHHHHHHHHhCCCeEEEEEECCCCcchhhhhHHHHHHHH
Confidence 00000 11121 1 1233677788886531 123334444433 245555555433211111 0 111
Q ss_pred --hcCCCceEEeeecHHH---HhcccCccceecc----CchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEe
Q 012645 319 --SVGETGLVVRWCNQFE---VLAHQAVGCFITH----CGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRA 389 (459)
Q Consensus 319 --~~~~~v~v~~~~p~~~---lL~~~~~~~~I~H----GG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~ 389 (459)
...+++.+.+++|+.+ +++.+++ +++. |-..++.||+++|+|+|+.... .....+++. +.|..+
T Consensus 278 ~~~~~~~v~~~g~~~~~~~~~~~~~adi--~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~----~~~e~i~~~-~~g~~~ 350 (398)
T cd03800 278 ELGVIDRVDFPGRVSREDLPALYRAADV--FVNPALYEPFGLTALEAMACGLPVVATAVG----GPRDIVVDG-VTGLLV 350 (398)
T ss_pred hcCCCceEEEeccCCHHHHHHHHHhCCE--EEecccccccCcHHHHHHhcCCCEEECCCC----CHHHHccCC-CCeEEe
Confidence 1346888999999765 5877777 7744 2236899999999999876643 355567777 788777
Q ss_pred eecCCCcccHHHHHHHHHHHhcCh
Q 012645 390 KKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 390 ~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
+ .-+.+++.++|.++++|+
T Consensus 351 ~-----~~~~~~l~~~i~~l~~~~ 369 (398)
T cd03800 351 D-----PRDPEALAAALRRLLTDP 369 (398)
T ss_pred C-----CCCHHHHHHHHHHHHhCH
Confidence 6 457999999999999986
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.26 E-value=3.4e-08 Score=95.10 Aligned_cols=316 Identities=16% Similarity=0.134 Sum_probs=165.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCcccc-ccCCCCceEEEcCCCCCCCCCCCCCCHHHHHHHHHHhch
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVK-SIHATTVGVEPISDGFDEGGFKQAPSVKAYLESFKTVGS 87 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (459)
||++++....|+......++++|.++||+|++++...... .....+++++.++..... ......+...
T Consensus 1 kIl~i~~~~~g~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~----- 69 (359)
T cd03808 1 KILHIVTVDGGLYSFRLPLIKALRAAGYEVHVVAPPGDELEELEALGVKVIPIPLDRRG------INPFKDLKAL----- 69 (359)
T ss_pred CeeEEEecchhHHHHHHHHHHHHHhcCCeeEEEecCCCcccccccCCceEEeccccccc------cChHhHHHHH-----
Confidence 5788887788899999999999999999999999876554 345568888777632110 1111111111
Q ss_pred HHHHHHHHHhhcCCCCccEEEeCCCch--hHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCcccCCCC
Q 012645 88 RTLAEVILKYKDSESPVNCIVYDSLLT--WALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPGL 165 (459)
Q Consensus 88 ~~~~~l~~~~~~~~~~~Dlvi~D~~~~--~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~p~~ 165 (459)
..+...+++. +||+|++..... .+..+++..+.|.+..........
T Consensus 70 ~~~~~~~~~~-----~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--------------------------- 117 (359)
T cd03808 70 LRLYRLLRKE-----RPDIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFV--------------------------- 117 (359)
T ss_pred HHHHHHHHhc-----CCCEEEEccccchhHHHHHHHHcCCCCEEEEecCcchh---------------------------
Confidence 1223333332 899998875433 234445546666555443220000
Q ss_pred CCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcCCCeeeecccCCCccccccccCCc
Q 012645 166 PSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAYLDQQIAGDS 245 (459)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vgp~~~~~~~~~~~~~~~ 245 (459)
.... .........+.+. ....++.+++.+-...+...............+.|...+.
T Consensus 118 --~~~~---------~~~~~~~~~~~~~--~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 174 (359)
T cd03808 118 --FTSG---------GLKRRLYLLLERL--ALRFTDKVIFQNEDDRDLALKLGIIKKKKTVLIPGSGVDL---------- 174 (359)
T ss_pred --hccc---------hhHHHHHHHHHHH--HHhhccEEEEcCHHHHHHHHHhcCCCcCceEEecCCCCCh----------
Confidence 0000 0011111222222 1234577777665543321111111001122222211110
Q ss_pred cCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCccc-CCHHHHHHHHHHHHh--CCCcEEEEEeCCC-CCCchh-hhh-h
Q 012645 246 AYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMAD-IAANQVDEIARGLKA--SEKPFLWVVKENE-NKLPVE-FVN-S 319 (459)
Q Consensus 246 ~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~-~~~~~~~~i~~a~~~--~~~~~v~~~~~~~-~~~~~~-~~~-~ 319 (459)
......... .+.++.+++..|+... -..+.+-..++.+.. .+.+++++..... ...... ... .
T Consensus 175 ----~~~~~~~~~-------~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~ 243 (359)
T cd03808 175 ----DRFSPSPEP-------IPEDDPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLLLVGDGDEENPAAILEIEKLG 243 (359)
T ss_pred ----hhcCccccc-------cCCCCcEEEEEeccccccCHHHHHHHHHHHHhcCCCeEEEEEcCCCcchhhHHHHHHhcC
Confidence 000000000 1234478888888653 233333334444433 3344444433322 111100 111 1
Q ss_pred cCCCceEEeeecHH-HHhcccCccceeccCc----hhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCC
Q 012645 320 VGETGLVVRWCNQF-EVLAHQAVGCFITHCG----WNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRA 394 (459)
Q Consensus 320 ~~~~v~v~~~~p~~-~lL~~~~~~~~I~HGG----~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~ 394 (459)
...+|.+.++..+. .+++.+++ +|.-.. .+++.||+++|+|+|+.+.. .+...++.. +.|...+
T Consensus 244 ~~~~v~~~g~~~~~~~~~~~adi--~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~----~~~~~i~~~-~~g~~~~---- 312 (359)
T cd03808 244 LEGRVEFLGFRDDVPELLAAADV--FVLPSYREGLPRVLLEAMAMGRPVIATDVP----GCREAVIDG-VNGFLVP---- 312 (359)
T ss_pred CcceEEEeeccccHHHHHHhccE--EEecCcccCcchHHHHHHHcCCCEEEecCC----CchhhhhcC-cceEEEC----
Confidence 34678887775544 78888887 775433 57899999999999986543 344555556 7776665
Q ss_pred CcccHHHHHHHHHHHhcCh
Q 012645 395 GIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 395 ~~~~~~~l~~~i~~ll~~~ 413 (459)
.-+++++.+++.+++.|+
T Consensus 313 -~~~~~~~~~~i~~l~~~~ 330 (359)
T cd03808 313 -PGDAEALADAIERLIEDP 330 (359)
T ss_pred -CCCHHHHHHHHHHHHhCH
Confidence 457899999999999887
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.26 E-value=2.5e-08 Score=96.78 Aligned_cols=144 Identities=14% Similarity=0.179 Sum_probs=87.1
Q ss_pred CcEEEEEeCCccc-CCHHHHHHHHHHHHh--CCCcEEEEEeCCCCCCchhhhh-----hcCCCceEEeeecHH---HHhc
Q 012645 269 KSVIYVSFGSMAD-IAANQVDEIARGLKA--SEKPFLWVVKENENKLPVEFVN-----SVGETGLVVRWCNQF---EVLA 337 (459)
Q Consensus 269 ~~~V~vs~Gs~~~-~~~~~~~~i~~a~~~--~~~~~v~~~~~~~~~~~~~~~~-----~~~~~v~v~~~~p~~---~lL~ 337 (459)
++.+++..|+... ...+.+-.++..+.. .+.++++..... ..+.+.+ ...+++.+.+++|+. .+++
T Consensus 201 ~~~~i~~~G~~~~~k~~~~l~~~~~~~~~~~~~~~l~i~G~~~---~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~ 277 (374)
T cd03817 201 DEPVLLYVGRLAKEKNIDFLIRAFARLLKEEPDVKLVIVGDGP---EREELEELARELGLADRVIFTGFVPREELPDYYK 277 (374)
T ss_pred CCeEEEEEeeeecccCHHHHHHHHHHHHHhCCCeEEEEEeCCc---hHHHHHHHHHHcCCCCcEEEeccCChHHHHHHHH
Confidence 3466677787653 233333333443433 334445443321 1111211 235789999999876 4677
Q ss_pred ccCccceecc----CchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcCh
Q 012645 338 HQAVGCFITH----CGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 338 ~~~~~~~I~H----GG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
.+++ +|.. |...++.||+++|+|+|+... ...+..++.. +.|..++.. +. ++.+++.++++++
T Consensus 278 ~ad~--~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~----~~~~~~i~~~-~~g~~~~~~-----~~-~~~~~i~~l~~~~ 344 (374)
T cd03817 278 AADL--FVFASTTETQGLVLLEAMAAGLPVVAVDA----PGLPDLVADG-ENGFLFPPG-----DE-ALAEALLRLLQDP 344 (374)
T ss_pred HcCE--EEecccccCcChHHHHHHHcCCcEEEeCC----CChhhheecC-ceeEEeCCC-----CH-HHHHHHHHHHhCh
Confidence 7777 6633 344789999999999998653 4456666776 778777643 22 8999999999987
Q ss_pred h-hHHHHHHHHHHHHH
Q 012645 414 R-SQKIKRNVSKWREF 428 (459)
Q Consensus 414 ~-~~~~~~~a~~l~~~ 428 (459)
+ .+.+.+++++..+.
T Consensus 345 ~~~~~~~~~~~~~~~~ 360 (374)
T cd03817 345 ELRRRLSKNAEESAEK 360 (374)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 2 12344444444443
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.6e-09 Score=95.86 Aligned_cols=145 Identities=17% Similarity=0.140 Sum_probs=105.7
Q ss_pred CcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhc--CCCceEEeeecHH-HHhcccCcccee
Q 012645 269 KSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENENKLPVEFVNSV--GETGLVVRWCNQF-EVLAHQAVGCFI 345 (459)
Q Consensus 269 ~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~~v~v~~~~p~~-~lL~~~~~~~~I 345 (459)
+.-|+|++|..- +....-+++..+.+..+.+-++++.. +....+...+. .+|+.+......+ .|++.+++ .|
T Consensus 158 ~r~ilI~lGGsD--pk~lt~kvl~~L~~~~~nl~iV~gs~-~p~l~~l~k~~~~~~~i~~~~~~~dma~LMke~d~--aI 232 (318)
T COG3980 158 KRDILITLGGSD--PKNLTLKVLAELEQKNVNLHIVVGSS-NPTLKNLRKRAEKYPNINLYIDTNDMAELMKEADL--AI 232 (318)
T ss_pred hheEEEEccCCC--hhhhHHHHHHHhhccCeeEEEEecCC-CcchhHHHHHHhhCCCeeeEecchhHHHHHHhcch--he
Confidence 346999999863 33456667888887776666666643 22223333332 3677776666544 79977887 99
Q ss_pred ccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHH
Q 012645 346 THCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKW 425 (459)
Q Consensus 346 ~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l 425 (459)
+-||. |+.|++..|+|.+++|...-|--.|...+.+ |+-..+.. .++.......+.++.+|. .-+++...-
T Consensus 233 ~AaGs-tlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~l-g~~~~l~~----~l~~~~~~~~~~~i~~d~---~~rk~l~~~ 303 (318)
T COG3980 233 SAAGS-TLYEALLLGVPSLVLPLAENQIATAKEFEAL-GIIKQLGY----HLKDLAKDYEILQIQKDY---ARRKNLSFG 303 (318)
T ss_pred eccch-HHHHHHHhcCCceEEeeeccHHHHHHHHHhc-CchhhccC----CCchHHHHHHHHHhhhCH---HHhhhhhhc
Confidence 98875 7899999999999999999999999999999 87766654 477778888888899987 655554443
Q ss_pred HH
Q 012645 426 RE 427 (459)
Q Consensus 426 ~~ 427 (459)
.+
T Consensus 304 ~~ 305 (318)
T COG3980 304 SK 305 (318)
T ss_pred cc
Confidence 33
|
|
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=99.25 E-value=3e-08 Score=95.68 Aligned_cols=316 Identities=17% Similarity=0.117 Sum_probs=164.6
Q ss_pred EEEEEcCC---C-ccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCC--CceEEEcCCCCCCCCCCCCCCHHHHHHHH
Q 012645 9 HVLVLTYP---A-QGHINPLLQFAKRLASKRVKATLATTHYTVKSIHAT--TVGVEPISDGFDEGGFKQAPSVKAYLESF 82 (459)
Q Consensus 9 kil~~~~~---~-~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (459)
||++++.. . .|+...+..+++.|.+.||+|++++........... ....... . .... ......
T Consensus 1 kI~ii~~~~~~~~~G~~~~~~~l~~~L~~~g~~v~i~~~~~~~~~~~~~~~~~~~~~~-----~-----~~~~-~~~~~~ 69 (374)
T cd03801 1 KILLVTPEYPPSVGGAERHVLELARALAARGHEVTVLTPGDGGLPDEEEVGGIVVVRP-----P-----PLLR-VRRLLL 69 (374)
T ss_pred CeeEEecccCCccCcHhHHHHHHHHHHHhcCceEEEEecCCCCCCceeeecCcceecC-----C-----cccc-cchhHH
Confidence 45555542 2 688999999999999999999999987554332221 0000000 0 0000 000011
Q ss_pred HHhchHHHHHHHHHhhcCCCCccEEEeCCCchhHH--HHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCcc
Q 012645 83 KTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWAL--DVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPL 160 (459)
Q Consensus 83 ~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~--~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 160 (459)
.......+...++.. ++|+|+......... .++...++|++...+...
T Consensus 70 ~~~~~~~~~~~~~~~-----~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~------------------------- 119 (374)
T cd03801 70 LLLLALRLRRLLRRE-----RFDVVHAHDWLALLAAALAARLLGIPLVLTVHGLE------------------------- 119 (374)
T ss_pred HHHHHHHHHHHhhhc-----CCcEEEEechhHHHHHHHHHHhcCCcEEEEeccch-------------------------
Confidence 111112233333332 899999887665433 477888999998765431
Q ss_pred cCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcC-CCeeeecccCCCccccc
Q 012645 161 TLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGL-WPLVMIGPLVPSAYLDQ 239 (459)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~vgp~~~~~~~~~ 239 (459)
+.. .. .. .......... .....+...+.+++.+....+.. ....... .++..+.+.+....
T Consensus 120 --~~~--~~-~~-------~~~~~~~~~~--~~~~~~~~~d~~i~~s~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~--- 181 (374)
T cd03801 120 --FGR--PG-NE-------LGLLLKLARA--LERRALRRADRIIAVSEATREEL-RELGGVPPEKITVIPNGVDTER--- 181 (374)
T ss_pred --hhc--cc-cc-------hhHHHHHHHH--HHHHHHHhCCEEEEecHHHHHHH-HhcCCCCCCcEEEecCcccccc---
Confidence 000 00 00 0000001111 11123345677777775544321 1111110 13444433222210
Q ss_pred cccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhC-----CCcEEEEEeCCCCCCch
Q 012645 240 QIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKAS-----EKPFLWVVKENENKLPV 314 (459)
Q Consensus 240 ~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~-----~~~~v~~~~~~~~~~~~ 314 (459)
..+.......-. ....+..+++.+|+... ......+++++..+ +.++++.. .. ....
T Consensus 182 ------------~~~~~~~~~~~~-~~~~~~~~i~~~g~~~~--~k~~~~~i~~~~~~~~~~~~~~l~i~G-~~--~~~~ 243 (374)
T cd03801 182 ------------FRPAPRAARRRL-GIPEDEPVILFVGRLVP--RKGVDLLLEALAKLRKEYPDVRLVIVG-DG--PLRE 243 (374)
T ss_pred ------------cCccchHHHhhc-CCcCCCeEEEEecchhh--hcCHHHHHHHHHHHhhhcCCeEEEEEe-Cc--HHHH
Confidence 000001111111 11233467777887652 22334444544432 23333333 21 1111
Q ss_pred hhhh-----hcCCCceEEeeecHH---HHhcccCccceec----cCchhhHHHhhhcCCeeeccccccchhhHHHHHHHh
Q 012645 315 EFVN-----SVGETGLVVRWCNQF---EVLAHQAVGCFIT----HCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEV 382 (459)
Q Consensus 315 ~~~~-----~~~~~v~v~~~~p~~---~lL~~~~~~~~I~----HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~ 382 (459)
.+.. ...+++.+.+++++. .++..+++ +|. -|..+++.||+++|+|+|+.+. ......++..
T Consensus 244 ~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di--~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~----~~~~~~~~~~ 317 (374)
T cd03801 244 ELEALAAELGLGDRVTFLGFVPDEDLPALYAAADV--FVLPSLYEGFGLVLLEAMAAGLPVVASDV----GGIPEVVEDG 317 (374)
T ss_pred HHHHHHHHhCCCcceEEEeccChhhHHHHHHhcCE--EEecchhccccchHHHHHHcCCcEEEeCC----CChhHHhcCC
Confidence 1111 245789999999754 57877777 773 3556799999999999998765 4455566656
Q ss_pred hhceEEeeecCCCcccHHHHHHHHHHHhcCh
Q 012645 383 WEVGVRAKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 383 ~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
+.|...+ ..+++++.++|.++++|+
T Consensus 318 -~~g~~~~-----~~~~~~l~~~i~~~~~~~ 342 (374)
T cd03801 318 -ETGLLVP-----PGDPEALAEAILRLLDDP 342 (374)
T ss_pred -cceEEeC-----CCCHHHHHHHHHHHHcCh
Confidence 7787766 456999999999999987
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.3e-08 Score=99.46 Aligned_cols=142 Identities=15% Similarity=0.200 Sum_probs=84.2
Q ss_pred cEEEEEeCCcccCCHHHHHHHHHHHH----hCCCcEEEEEeCCC-CCCchhhhh-hcCCCceEEeeecHH-HHhcccCcc
Q 012645 270 SVIYVSFGSMADIAANQVDEIARGLK----ASEKPFLWVVKENE-NKLPVEFVN-SVGETGLVVRWCNQF-EVLAHQAVG 342 (459)
Q Consensus 270 ~~V~vs~Gs~~~~~~~~~~~i~~a~~----~~~~~~v~~~~~~~-~~~~~~~~~-~~~~~v~v~~~~p~~-~lL~~~~~~ 342 (459)
..+++..|..... ..+..++++++ ..+.+++++..... ..+...... ...+++.+.++.++. .+++.+++
T Consensus 197 ~~~il~~g~l~~~--K~~~~li~a~~~l~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~d~- 273 (371)
T cd04962 197 EKVLIHISNFRPV--KRIDDVIRIFAKVRKEVPARLLLVGDGPERSPAERLARELGLQDDVLFLGKQDHVEELLSIADL- 273 (371)
T ss_pred CeEEEEecccccc--cCHHHHHHHHHHHHhcCCceEEEEcCCcCHHHHHHHHHHcCCCceEEEecCcccHHHHHHhcCE-
Confidence 3667777776531 22233333332 23556655543321 111111111 134678888887755 78877777
Q ss_pred ceec----cCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcChhh-HH
Q 012645 343 CFIT----HCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERS-QK 417 (459)
Q Consensus 343 ~~I~----HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~-~~ 417 (459)
+|. -|...++.||+++|+|+|+... ...+..++.- ..|...+ .-+.+++.+++.++++|++. ++
T Consensus 274 -~v~ps~~E~~~~~~~EAma~g~PvI~s~~----~~~~e~i~~~-~~G~~~~-----~~~~~~l~~~i~~l~~~~~~~~~ 342 (371)
T cd04962 274 -FLLPSEKESFGLAALEAMACGVPVVASNA----GGIPEVVKHG-ETGFLVD-----VGDVEAMAEYALSLLEDDELWQE 342 (371)
T ss_pred -EEeCCCcCCCccHHHHHHHcCCCEEEeCC----CCchhhhcCC-CceEEcC-----CCCHHHHHHHHHHHHhCHHHHHH
Confidence 662 2334699999999999998543 3455566665 5676554 45789999999999998731 23
Q ss_pred HHHHHHHH
Q 012645 418 IKRNVSKW 425 (459)
Q Consensus 418 ~~~~a~~l 425 (459)
+++++++.
T Consensus 343 ~~~~~~~~ 350 (371)
T cd04962 343 FSRAARNR 350 (371)
T ss_pred HHHHHHHH
Confidence 44444443
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=6.2e-08 Score=96.17 Aligned_cols=160 Identities=12% Similarity=0.108 Sum_probs=90.1
Q ss_pred cEEEEEeCCcccCCHHHHHHHHHHHHhC----CCcEEEEEeCCCCCCchhhhh----hcCCCceEEeeecHH---HHhcc
Q 012645 270 SVIYVSFGSMADIAANQVDEIARGLKAS----EKPFLWVVKENENKLPVEFVN----SVGETGLVVRWCNQF---EVLAH 338 (459)
Q Consensus 270 ~~V~vs~Gs~~~~~~~~~~~i~~a~~~~----~~~~v~~~~~~~~~~~~~~~~----~~~~~v~v~~~~p~~---~lL~~ 338 (459)
+.+++..|+... ...+..++++++.+ +.+++++ +. +...+.+.+ ...+||.+.+++|+. .+++.
T Consensus 229 ~~~i~~~G~l~~--~kg~~~li~a~~~l~~~~~~~l~iv-G~--g~~~~~l~~~~~~~~l~~v~f~G~~~~~~~~~~~~~ 303 (412)
T PRK10307 229 KKIVLYSGNIGE--KQGLELVIDAARRLRDRPDLIFVIC-GQ--GGGKARLEKMAQCRGLPNVHFLPLQPYDRLPALLKM 303 (412)
T ss_pred CEEEEEcCcccc--ccCHHHHHHHHHHhccCCCeEEEEE-CC--ChhHHHHHHHHHHcCCCceEEeCCCCHHHHHHHHHh
Confidence 466667788753 22344455555442 2344443 32 222222221 112578889999865 47878
Q ss_pred cCccceeccCch------hhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcC
Q 012645 339 QAVGCFITHCGW------NSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDG 412 (459)
Q Consensus 339 ~~~~~~I~HGG~------gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~ 412 (459)
+++..+.+..+. +.+.|++++|+|+|+....+.. ....++ +.|..++ .-+.+++.++|.++++|
T Consensus 304 aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~--~~~~i~---~~G~~~~-----~~d~~~la~~i~~l~~~ 373 (412)
T PRK10307 304 ADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTE--LGQLVE---GIGVCVE-----PESVEALVAAIAALARQ 373 (412)
T ss_pred cCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCch--HHHHHh---CCcEEeC-----CCCHHHHHHHHHHHHhC
Confidence 888444444332 2368999999999998653311 111222 4466665 45789999999999988
Q ss_pred hh-hHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012645 413 ER-SQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLL 451 (459)
Q Consensus 413 ~~-~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~ 451 (459)
++ .+.+.+++++..++ .-+....++.+++.+.
T Consensus 374 ~~~~~~~~~~a~~~~~~-------~fs~~~~~~~~~~~~~ 406 (412)
T PRK10307 374 ALLRPKLGTVAREYAER-------TLDKENVLRQFIADIR 406 (412)
T ss_pred HHHHHHHHHHHHHHHHH-------HcCHHHHHHHHHHHHH
Confidence 62 23455555543332 2333455555544443
|
|
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.22 E-value=8.4e-08 Score=94.67 Aligned_cols=81 Identities=17% Similarity=0.158 Sum_probs=59.8
Q ss_pred CCCceEEeeecHHH---HhcccCccceec---cCch-hhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecC
Q 012645 321 GETGLVVRWCNQFE---VLAHQAVGCFIT---HCGW-NSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNR 393 (459)
Q Consensus 321 ~~~v~v~~~~p~~~---lL~~~~~~~~I~---HGG~-gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~ 393 (459)
.++|.+.+++|+.+ +++.+++ +|. +.|. .++.||+++|+|+|... .......+..- ..|..++
T Consensus 280 ~~~V~f~G~v~~~~~~~~l~~adv--~v~~s~~e~~~~~llEAmA~G~PVIas~----~~g~~e~i~~~-~~G~lv~--- 349 (396)
T cd03818 280 LSRVHFLGRVPYDQYLALLQVSDV--HVYLTYPFVLSWSLLEAMACGCLVVGSD----TAPVREVITDG-ENGLLVD--- 349 (396)
T ss_pred cceEEEeCCCCHHHHHHHHHhCcE--EEEcCcccccchHHHHHHHCCCCEEEcC----CCCchhhcccC-CceEEcC---
Confidence 36888999999764 6767777 553 2333 48999999999999864 33455555555 5676665
Q ss_pred CCcccHHHHHHHHHHHhcCh
Q 012645 394 AGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 394 ~~~~~~~~l~~~i~~ll~~~ 413 (459)
.-+++.+.++|.++++|+
T Consensus 350 --~~d~~~la~~i~~ll~~~ 367 (396)
T cd03818 350 --FFDPDALAAAVIELLDDP 367 (396)
T ss_pred --CCCHHHHHHHHHHHHhCH
Confidence 457999999999999987
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.20 E-value=5.5e-08 Score=96.39 Aligned_cols=341 Identities=14% Similarity=0.064 Sum_probs=170.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccc---cccCCCCceEEEcCCCCCCCCCCCCCCHHHHHHHH
Q 012645 6 ERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTV---KSIHATTVGVEPISDGFDEGGFKQAPSVKAYLESF 82 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (459)
++.||.+++..-.|+-..+..+|++|+++||+|++++..... +.....|+.++.++..-. ........+..+
T Consensus 2 ~~~~~~~~~~~~~~~~~R~~~~a~~L~~~G~~V~ii~~~~~~~~~~~~~~~~v~~~~~~~~~~-----~~~~~~~~~~~~ 76 (415)
T cd03816 2 KRKRVCVLVLGDIGRSPRMQYHALSLAKHGWKVDLVGYLETPPHDEILSNPNITIHPLPPPPQ-----RLNKLPFLLFAP 76 (415)
T ss_pred CccEEEEEEecccCCCHHHHHHHHHHHhcCceEEEEEecCCCCCHHHhcCCCEEEEECCCCcc-----ccccchHHHHHH
Confidence 467888888888888899999999999999999999875432 113446888888753210 011112222222
Q ss_pred HH---hchHHHHHHHHHhhcCCCCccEEEeCCCc----h-hHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCC
Q 012645 83 KT---VGSRTLAEVILKYKDSESPVNCIVYDSLL----T-WALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVN 154 (459)
Q Consensus 83 ~~---~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~----~-~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~ 154 (459)
.. .....+..++.. .+||+|++.... . .+..+++..++|+|...+...... . .
T Consensus 77 ~~~~~~~~~~~~~l~~~-----~~~Dvi~~~~~~~~~~~~~a~~~~~~~~~~~V~~~h~~~~~~--~-~----------- 137 (415)
T cd03816 77 LKVLWQFFSLLWLLYKL-----RPADYILIQNPPSIPTLLIAWLYCLLRRTKLIIDWHNYGYTI--L-A----------- 137 (415)
T ss_pred HHHHHHHHHHHHHHHhc-----CCCCEEEEeCCCCchHHHHHHHHHHHhCCeEEEEcCCchHHH--H-h-----------
Confidence 11 112222223222 279999975322 1 244456678999987654321000 0 0
Q ss_pred CCCCcccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcCCCeeeecccCCC
Q 012645 155 QETVPLTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPS 234 (459)
Q Consensus 155 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vgp~~~~ 234 (459)
..... ......+...+.+. .++.++.+++.+-..-+. .........++..+......
T Consensus 138 -------------~~~~~-------~~~~~~~~~~~e~~--~~~~ad~ii~vS~~~~~~-l~~~~~~~~ki~vI~Ng~~~ 194 (415)
T cd03816 138 -------------LKLGE-------NHPLVRLAKWYEKL--FGRLADYNLCVTKAMKED-LQQFNNWKIRATVLYDRPPE 194 (415)
T ss_pred -------------cccCC-------CCHHHHHHHHHHHH--HhhcCCEeeecCHHHHHH-HHhhhccCCCeeecCCCCHH
Confidence 00000 00000111111121 124467777666553332 11111111122222111000
Q ss_pred ccccccccCCccCCCCCCCCChhhhhhhh----------------ccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhC-
Q 012645 235 AYLDQQIAGDSAYGANIWEPTGDQCMRWL----------------ATKPEKSVIYVSFGSMADIAANQVDEIARGLKAS- 297 (459)
Q Consensus 235 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~l----------------~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~- 297 (459)
.+. +.+ .......+. ...+++..++++.|.... ...+..+++|+..+
T Consensus 195 -~f~-p~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~grl~~--~K~~~~li~A~~~l~ 258 (415)
T cd03816 195 -QFR-PLP------------LEEKHELFLKLAKTFLTRELRIGAVQLSEERPALLVSSTSWTP--DEDFGILLDALVAYE 258 (415)
T ss_pred -Hce-eCc------------HHHHHHHHHhccccccccccccccceecCCCceEEEEeccccC--CCCHHHHHHHHHHHH
Confidence 000 000 000001111 011234467777787653 12333444444332
Q ss_pred ----------CCcEEEEEeCCCCCCchhhhh---hc-CCCceEE-eeecHH---HHhcccCccceec-c----C-c-hhh
Q 012645 298 ----------EKPFLWVVKENENKLPVEFVN---SV-GETGLVV-RWCNQF---EVLAHQAVGCFIT-H----C-G-WNS 352 (459)
Q Consensus 298 ----------~~~~v~~~~~~~~~~~~~~~~---~~-~~~v~v~-~~~p~~---~lL~~~~~~~~I~-H----G-G-~gs 352 (459)
+.+++++ +.+ ...+.+.+ .. -+++.+. +|+|.. .+|+.+++ +|. + | | -.+
T Consensus 259 ~~~~~~~~~~~i~l~iv-G~G--~~~~~l~~~~~~~~l~~~~~~~g~~~~~~~~~~l~~aDv--~v~~~~~~~~~~~p~~ 333 (415)
T cd03816 259 KSAATGPKLPKLLCIIT-GKG--PLKEKYLERIKELKLKKVTIRTPWLSAEDYPKLLASADL--GVSLHTSSSGLDLPMK 333 (415)
T ss_pred HhhcccccCCCEEEEEE-ecC--ccHHHHHHHHHHcCCCcEEEEcCcCCHHHHHHHHHhCCE--EEEccccccccCCcHH
Confidence 2333333 332 22222221 11 2466655 688755 46777888 662 1 1 2 347
Q ss_pred HHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcC---hh-hHHHHHHHHHHH
Q 012645 353 ILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDG---ER-SQKIKRNVSKWR 426 (459)
Q Consensus 353 ~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~---~~-~~~~~~~a~~l~ 426 (459)
+.||+++|+|+|+... ......++.. +.|..+. +.++|.++|.++++| ++ .+.+.+++++..
T Consensus 334 ~~Eama~G~PVI~s~~----~~~~eiv~~~-~~G~lv~-------d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~ 399 (415)
T cd03816 334 VVDMFGCGLPVCALDF----KCIDELVKHG-ENGLVFG-------DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEES 399 (415)
T ss_pred HHHHHHcCCCEEEeCC----CCHHHHhcCC-CCEEEEC-------CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhh
Confidence 9999999999988553 3455666666 7786652 579999999999998 52 345555555554
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.19 E-value=3.9e-08 Score=95.58 Aligned_cols=82 Identities=20% Similarity=0.102 Sum_probs=59.0
Q ss_pred cCCCceEEeeec-HH---HHhcccCccceecc----CchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeee
Q 012645 320 VGETGLVVRWCN-QF---EVLAHQAVGCFITH----CGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKK 391 (459)
Q Consensus 320 ~~~~v~v~~~~p-~~---~lL~~~~~~~~I~H----GG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~ 391 (459)
...++.+.+|++ +. .+++.+++ +|.- |..+++.||+++|+|+|+.... .....+... +.|..++
T Consensus 242 ~~~~v~~~g~~~~~~~~~~~~~~ad~--~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~----~~~e~~~~~-~~g~~~~- 313 (365)
T cd03825 242 LPFPVHYLGSLNDDESLALIYSAADV--FVVPSLQENFPNTAIEALACGTPVVAFDVG----GIPDIVDHG-VTGYLAK- 313 (365)
T ss_pred CCCceEecCCcCCHHHHHHHHHhCCE--EEeccccccccHHHHHHHhcCCCEEEecCC----CChhheeCC-CceEEeC-
Confidence 456788889998 43 56877777 7774 3357999999999999876542 222334444 4565555
Q ss_pred cCCCcccHHHHHHHHHHHhcCh
Q 012645 392 NRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 392 ~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
..+.+.+.+++.++++|+
T Consensus 314 ----~~~~~~~~~~l~~l~~~~ 331 (365)
T cd03825 314 ----PGDPEDLAEGIEWLLADP 331 (365)
T ss_pred ----CCCHHHHHHHHHHHHhCH
Confidence 467899999999999987
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.16 E-value=2.5e-09 Score=104.23 Aligned_cols=131 Identities=16% Similarity=0.185 Sum_probs=84.9
Q ss_pred CCcEEEEEeCCcccC-CHHHHHHHHHHHHhCCC-cEEEEEeCCCCCCchhhhh---hc---CCCceEEeeecHH---HHh
Q 012645 268 EKSVIYVSFGSMADI-AANQVDEIARGLKASEK-PFLWVVKENENKLPVEFVN---SV---GETGLVVRWCNQF---EVL 336 (459)
Q Consensus 268 ~~~~V~vs~Gs~~~~-~~~~~~~i~~a~~~~~~-~~v~~~~~~~~~~~~~~~~---~~---~~~v~v~~~~p~~---~lL 336 (459)
+++.|++++|..... ....+..++++++.+.. +++++..... .....+.+ .. .+++.+.+..++. .++
T Consensus 197 ~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~~-~~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~l~ 275 (363)
T cd03786 197 PKKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNHP-RTRPRIREAGLEFLGHHPNVLLISPLGYLYFLLLL 275 (363)
T ss_pred CCCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECCC-ChHHHHHHHHHhhccCCCCEEEECCcCHHHHHHHH
Confidence 455788888876543 34567778888876543 2444443321 11122221 11 3678777665544 567
Q ss_pred cccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcCh
Q 012645 337 AHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 337 ~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
+.+++ ||+..| |.+.||++.|+|+|+++.. |. +..+.+. |++..+. -+.+.|.+++.++++++
T Consensus 276 ~~ad~--~v~~Sg-gi~~Ea~~~g~PvI~~~~~--~~--~~~~~~~-g~~~~~~------~~~~~i~~~i~~ll~~~ 338 (363)
T cd03786 276 KNADL--VLTDSG-GIQEEASFLGVPVLNLRDR--TE--RPETVES-GTNVLVG------TDPEAILAAIEKLLSDE 338 (363)
T ss_pred HcCcE--EEEcCc-cHHhhhhhcCCCEEeeCCC--Cc--cchhhhe-eeEEecC------CCHHHHHHHHHHHhcCc
Confidence 66777 999999 8888999999999998743 22 3345566 6554332 25899999999999986
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.4e-07 Score=90.30 Aligned_cols=81 Identities=16% Similarity=0.220 Sum_probs=58.2
Q ss_pred CCCceEEeeecHH-HHhcccCccceeccC----chhhHHHhhhcCCeeeccccccchhhHHHHHHHhhh-ceEEeeecCC
Q 012645 321 GETGLVVRWCNQF-EVLAHQAVGCFITHC----GWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWE-VGVRAKKNRA 394 (459)
Q Consensus 321 ~~~v~v~~~~p~~-~lL~~~~~~~~I~HG----G~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G-~G~~~~~~~~ 394 (459)
..++.+.++.... .++..+++ +|.-. ..+++.||+++|+|+|+.+....+ ..+... | .|...+
T Consensus 234 ~~~v~~~g~~~~~~~~~~~ad~--~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~----~~~~~~-~~~g~~~~---- 302 (348)
T cd03820 234 EDRVILLGFTKNIEEYYAKASI--FVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGP----SEIIED-GVNGLLVP---- 302 (348)
T ss_pred CCeEEEcCCcchHHHHHHhCCE--EEeCccccccCHHHHHHHHcCCCEEEecCCCch----Hhhhcc-CcceEEeC----
Confidence 4567777764433 78877777 77554 247899999999999986544332 234444 4 676665
Q ss_pred CcccHHHHHHHHHHHhcCh
Q 012645 395 GIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 395 ~~~~~~~l~~~i~~ll~~~ 413 (459)
..+.+++.++|.++++|+
T Consensus 303 -~~~~~~~~~~i~~ll~~~ 320 (348)
T cd03820 303 -NGDVEALAEALLRLMEDE 320 (348)
T ss_pred -CCCHHHHHHHHHHHHcCH
Confidence 467899999999999998
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.08 E-value=4.2e-07 Score=89.52 Aligned_cols=92 Identities=14% Similarity=0.105 Sum_probs=62.6
Q ss_pred cCCCceEEeeecHH---HHhcccCccceecc---Cc-hhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeec
Q 012645 320 VGETGLVVRWCNQF---EVLAHQAVGCFITH---CG-WNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKN 392 (459)
Q Consensus 320 ~~~~v~v~~~~p~~---~lL~~~~~~~~I~H---GG-~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~ 392 (459)
..++|.+.+++|.. .+++.+++ ++.. -| ..++.||+++|+|+|+.-.. .....+... +.|...+
T Consensus 278 l~~~V~f~g~~~~~~~~~~l~~ad~--~l~~s~~E~~g~~~lEAma~G~PvI~s~~~----~~~e~i~~~-~~g~~~~-- 348 (392)
T cd03805 278 LEDQVIFLPSISDSQKELLLSSARA--LLYTPSNEHFGIVPLEAMYAGKPVIACNSG----GPLETVVDG-ETGFLCE-- 348 (392)
T ss_pred CCceEEEeCCCChHHHHHHHhhCeE--EEECCCcCCCCchHHHHHHcCCCEEEECCC----CcHHHhccC-CceEEeC--
Confidence 35789999999976 46777787 6632 22 25789999999999987432 233445555 5675543
Q ss_pred CCCcccHHHHHHHHHHHhcChh-hHHHHHHHHH
Q 012645 393 RAGIVTGEELNKCVNEVMDGER-SQKIKRNVSK 424 (459)
Q Consensus 393 ~~~~~~~~~l~~~i~~ll~~~~-~~~~~~~a~~ 424 (459)
. +++++.++|.+++++++ .+.+.+++++
T Consensus 349 ---~-~~~~~a~~i~~l~~~~~~~~~~~~~a~~ 377 (392)
T cd03805 349 ---P-TPEEFAEAMLKLANDPDLADRMGAAGRK 377 (392)
T ss_pred ---C-CHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence 3 78999999999999872 2334444433
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.08 E-value=4.6e-07 Score=87.69 Aligned_cols=132 Identities=14% Similarity=0.099 Sum_probs=81.6
Q ss_pred CcEEEEEeCCccc-CCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhh-----hcCCCceEEeeecHH---HHhccc
Q 012645 269 KSVIYVSFGSMAD-IAANQVDEIARGLKASEKPFLWVVKENENKLPVEFVN-----SVGETGLVVRWCNQF---EVLAHQ 339 (459)
Q Consensus 269 ~~~V~vs~Gs~~~-~~~~~~~~i~~a~~~~~~~~v~~~~~~~~~~~~~~~~-----~~~~~v~v~~~~p~~---~lL~~~ 339 (459)
+..+++..|+... ...+.+-..++.+...+.++.+.+.+.. .....+.+ ...+|+.+.+++++. .++..+
T Consensus 201 ~~~~i~~~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~-~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~a 279 (377)
T cd03798 201 DKKVILFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDG-PLREALEALAAELGLEDRVTFLGAVPHEEVPAYYAAA 279 (377)
T ss_pred CceEEEEeccCccccCHHHHHHHHHHHHhcCCCeEEEEEcCC-cchHHHHHHHHhcCCcceEEEeCCCCHHHHHHHHHhc
Confidence 3467777887654 2223333333333332233443333321 11111111 135789999999875 567677
Q ss_pred Ccccee----ccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcCh
Q 012645 340 AVGCFI----THCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 340 ~~~~~I----~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
++ +| +-|..+++.||+++|+|+|+.+.. .....++.. +.|...+ .-+.+++.+++.++++++
T Consensus 280 d~--~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~----~~~~~~~~~-~~g~~~~-----~~~~~~l~~~i~~~~~~~ 345 (377)
T cd03798 280 DV--FVLPSLREGFGLVLLEAMACGLPVVATDVG----GIPEIITDG-ENGLLVP-----PGDPEALAEAILRLLADP 345 (377)
T ss_pred Ce--eecchhhccCChHHHHHHhcCCCEEEecCC----ChHHHhcCC-cceeEEC-----CCCHHHHHHHHHHHhcCc
Confidence 77 66 335567899999999999876543 345556666 6676655 568999999999999987
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.07 E-value=5.1e-07 Score=89.37 Aligned_cols=335 Identities=15% Similarity=0.104 Sum_probs=164.9
Q ss_pred CccCHHHHHHHHHHHHhCCCeEEEEecCcccc---ccC-CCCceEEEcCCCCCCCCCCCCCCHHHHHHHHHHhchHHHHH
Q 012645 17 AQGHINPLLQFAKRLASKRVKATLATTHYTVK---SIH-ATTVGVEPISDGFDEGGFKQAPSVKAYLESFKTVGSRTLAE 92 (459)
Q Consensus 17 ~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~---~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (459)
..|--.-...||++|.++||+|+++++..... ..+ ..|+++..++...-.. .........+.......+..
T Consensus 19 ~GG~e~~v~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 93 (405)
T TIGR03449 19 AGGMNVYILETATELARRGIEVDIFTRATRPSQPPVVEVAPGVRVRNVVAGPYEG-----LDKEDLPTQLCAFTGGVLRA 93 (405)
T ss_pred CCCceehHHHHHHHHhhCCCEEEEEecccCCCCCCccccCCCcEEEEecCCCccc-----CCHHHHHHHHHHHHHHHHHH
Confidence 35666788999999999999999999753311 111 2477777664211100 01111111111111122223
Q ss_pred HHHHhhcCCCCccEEEeCCCc--hhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCcccCCCCCCCCC
Q 012645 93 VILKYKDSESPVNCIVYDSLL--TWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPGLPSLAS 170 (459)
Q Consensus 93 l~~~~~~~~~~~Dlvi~D~~~--~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~ 170 (459)
++.. ...++|+|-+.... ..+..+++.+++|+|...+...... ... +..
T Consensus 94 ~~~~---~~~~~Diih~h~~~~~~~~~~~~~~~~~p~v~t~h~~~~~~---~~~-----------------------~~~ 144 (405)
T TIGR03449 94 EARH---EPGYYDLIHSHYWLSGQVGWLLRDRWGVPLVHTAHTLAAVK---NAA-----------------------LAD 144 (405)
T ss_pred Hhhc---cCCCCCeEEechHHHHHHHHHHHHhcCCCEEEeccchHHHH---HHh-----------------------ccC
Confidence 3332 12379999776533 2355667788999887665331100 000 000
Q ss_pred CCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHh-cCCCeeeecccCCCccccccccCCccCCC
Q 012645 171 SDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAML-GLWPLVMIGPLVPSAYLDQQIAGDSAYGA 249 (459)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~vgp~~~~~~~~~~~~~~~~~g~ 249 (459)
...+ .........+ ..+..++.+++.+....+.. ..... ...++..+..-+....
T Consensus 145 ~~~~--------~~~~~~~~e~--~~~~~~d~vi~~s~~~~~~~-~~~~~~~~~ki~vi~ngvd~~~------------- 200 (405)
T TIGR03449 145 GDTP--------EPEARRIGEQ--QLVDNADRLIANTDEEARDL-VRHYDADPDRIDVVAPGADLER------------- 200 (405)
T ss_pred CCCC--------chHHHHHHHH--HHHHhcCeEEECCHHHHHHH-HHHcCCChhhEEEECCCcCHHH-------------
Confidence 0000 0001111111 12345677777765543321 11111 1112333332222100
Q ss_pred CCCCC-ChhhhhhhhccCCCCcEEEEEeCCcccC-CHHHHHHHHHHH-Hh-CC--CcEEEEEeCCC-C-CCchhhhh---
Q 012645 250 NIWEP-TGDQCMRWLATKPEKSVIYVSFGSMADI-AANQVDEIARGL-KA-SE--KPFLWVVKENE-N-KLPVEFVN--- 318 (459)
Q Consensus 250 ~~~~~-~~~~l~~~l~~~~~~~~V~vs~Gs~~~~-~~~~~~~i~~a~-~~-~~--~~~v~~~~~~~-~-~~~~~~~~--- 318 (459)
+.+ ..+....-+.. +++..+++..|+.... ..+.+-..+..+ +. .+ ..++++.+... + ...+.+.+
T Consensus 201 --~~~~~~~~~~~~~~~-~~~~~~i~~~G~l~~~K~~~~li~a~~~l~~~~~~~~~~l~ivG~~~~~g~~~~~~l~~~~~ 277 (405)
T TIGR03449 201 --FRPGDRATERARLGL-PLDTKVVAFVGRIQPLKAPDVLLRAVAELLDRDPDRNLRVIVVGGPSGSGLATPDALIELAA 277 (405)
T ss_pred --cCCCcHHHHHHhcCC-CCCCcEEEEecCCCcccCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCcchHHHHHHHHHH
Confidence 011 11112222221 1234677788887642 223332222222 22 12 33333332111 1 11122221
Q ss_pred --hcCCCceEEeeecHH---HHhcccCccceec---cCc-hhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEe
Q 012645 319 --SVGETGLVVRWCNQF---EVLAHQAVGCFIT---HCG-WNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRA 389 (459)
Q Consensus 319 --~~~~~v~v~~~~p~~---~lL~~~~~~~~I~---HGG-~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~ 389 (459)
...++|.+.+++|+. ++++.+++ +|. +.| ..++.||+++|+|+|+.... .....+++. +.|..+
T Consensus 278 ~~~l~~~v~~~g~~~~~~~~~~l~~ad~--~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~----~~~e~i~~~-~~g~~~ 350 (405)
T TIGR03449 278 ELGIADRVRFLPPRPPEELVHVYRAADV--VAVPSYNESFGLVAMEAQACGTPVVAARVG----GLPVAVADG-ETGLLV 350 (405)
T ss_pred HcCCCceEEECCCCCHHHHHHHHHhCCE--EEECCCCCCcChHHHHHHHcCCCEEEecCC----CcHhhhccC-CceEEC
Confidence 134689999999865 57878887 663 233 35899999999999986543 344455565 667666
Q ss_pred eecCCCcccHHHHHHHHHHHhcChh-hHHHHHHHHH
Q 012645 390 KKNRAGIVTGEELNKCVNEVMDGER-SQKIKRNVSK 424 (459)
Q Consensus 390 ~~~~~~~~~~~~l~~~i~~ll~~~~-~~~~~~~a~~ 424 (459)
+ .-+.+++.++|.+++++++ .+++++++++
T Consensus 351 ~-----~~d~~~la~~i~~~l~~~~~~~~~~~~~~~ 381 (405)
T TIGR03449 351 D-----GHDPADWADALARLLDDPRTRIRMGAAAVE 381 (405)
T ss_pred C-----CCCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 5 4578999999999999872 1234444443
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.7e-08 Score=98.39 Aligned_cols=135 Identities=13% Similarity=0.195 Sum_probs=82.4
Q ss_pred cEEEEEeCCcccCCHHHHHHHHHHHHhC-----CCcEEEEEeCCCCCCchhhhhh--cCCCceEEeeecHH---HHhccc
Q 012645 270 SVIYVSFGSMADIAANQVDEIARGLKAS-----EKPFLWVVKENENKLPVEFVNS--VGETGLVVRWCNQF---EVLAHQ 339 (459)
Q Consensus 270 ~~V~vs~Gs~~~~~~~~~~~i~~a~~~~-----~~~~v~~~~~~~~~~~~~~~~~--~~~~v~v~~~~p~~---~lL~~~ 339 (459)
+.|+++.+-..... ..+..+++++..+ +.++++....+. .....+.+. ..+++++.+.+++. .+++.+
T Consensus 198 ~~vl~~~hr~~~~~-k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~a 275 (365)
T TIGR00236 198 RYILLTLHRRENVG-EPLENIFKAIREIVEEFEDVQIVYPVHLNP-VVREPLHKHLGDSKRVHLIEPLEYLDFLNLAANS 275 (365)
T ss_pred CEEEEecCchhhhh-hHHHHHHHHHHHHHHHCCCCEEEEECCCCh-HHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhC
Confidence 46666554332211 3466677776653 445555433221 111111111 23578888766654 567667
Q ss_pred CccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcChhhHHHH
Q 012645 340 AVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIK 419 (459)
Q Consensus 340 ~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~ 419 (459)
++ +|+-.|.. +.||+++|+|+|.++...+++. +.+. |.+..+ ..+++.|.+++.++++|+ +.+
T Consensus 276 d~--vv~~Sg~~-~~EA~a~g~PvI~~~~~~~~~e----~~~~-g~~~lv------~~d~~~i~~ai~~ll~~~---~~~ 338 (365)
T TIGR00236 276 HL--ILTDSGGV-QEEAPSLGKPVLVLRDTTERPE----TVEA-GTNKLV------GTDKENITKAAKRLLTDP---DEY 338 (365)
T ss_pred CE--EEECChhH-HHHHHHcCCCEEECCCCCCChH----HHhc-CceEEe------CCCHHHHHHHHHHHHhCh---HHH
Confidence 76 99977654 7999999999999876555542 3346 766544 247899999999999987 555
Q ss_pred HHHH
Q 012645 420 RNVS 423 (459)
Q Consensus 420 ~~a~ 423 (459)
++..
T Consensus 339 ~~~~ 342 (365)
T TIGR00236 339 KKMS 342 (365)
T ss_pred HHhh
Confidence 5443
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.7e-07 Score=90.88 Aligned_cols=132 Identities=13% Similarity=0.133 Sum_probs=83.7
Q ss_pred cEEEEEeCCcccCCHHHHHHHHHHHHhCC-CcEEEEEeCCC-CCCchhh-hhhcCCCceEEeeecHH---HHhcccCccc
Q 012645 270 SVIYVSFGSMADIAANQVDEIARGLKASE-KPFLWVVKENE-NKLPVEF-VNSVGETGLVVRWCNQF---EVLAHQAVGC 343 (459)
Q Consensus 270 ~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~-~~~v~~~~~~~-~~~~~~~-~~~~~~~v~v~~~~p~~---~lL~~~~~~~ 343 (459)
..+++..|+... ......++++++... .+++++..+.. ..+..-. ......||.+.+++|+. .+++.+++-+
T Consensus 191 ~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~l~i~G~g~~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~~ad~~i 268 (357)
T cd03795 191 RPFFLFVGRLVY--YKGLDVLLEAAAALPDAPLVIVGEGPLEAELEALAAALGLLDRVRFLGRLDDEEKAALLAACDVFV 268 (357)
T ss_pred CcEEEEeccccc--ccCHHHHHHHHHhccCcEEEEEeCChhHHHHHHHHHhcCCcceEEEcCCCCHHHHHHHHHhCCEEE
Confidence 367778888653 234556777777766 45454433211 1111111 11235789999999975 5776777733
Q ss_pred eec---cCch-hhHHHhhhcCCeeeccccccchhhHHHHHHH-hhhceEEeeecCCCcccHHHHHHHHHHHhcCh
Q 012645 344 FIT---HCGW-NSILEGLSLGVAVVAVPQFSDQPTNAKFVEE-VWEVGVRAKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 344 ~I~---HGG~-gs~~eal~~GvP~li~P~~~DQ~~na~rv~~-~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
+-+ +.|. .++.||+++|+|+|+........ .+.. . +.|...+ .-+.+++.++|.++++|+
T Consensus 269 ~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~----~i~~~~-~~g~~~~-----~~d~~~~~~~i~~l~~~~ 333 (357)
T cd03795 269 FPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGS----YVNLHG-VTGLVVP-----PGDPAALAEAIRRLLEDP 333 (357)
T ss_pred eCCcccccccchHHHHHHHcCCCEEecCCCCchh----HHhhCC-CceEEeC-----CCCHHHHHHHHHHHHHCH
Confidence 323 2444 47999999999999876544433 3333 5 6776665 468999999999999987
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=99.02 E-value=2.5e-06 Score=90.78 Aligned_cols=379 Identities=11% Similarity=0.120 Sum_probs=192.9
Q ss_pred CCCcEEEEEcCCC---------------ccCHHHHHHHHHHHHhCC--CeEEEEecCcccc--------c---c------
Q 012645 5 RERVHVLVLTYPA---------------QGHINPLLQFAKRLASKR--VKATLATTHYTVK--------S---I------ 50 (459)
Q Consensus 5 ~~~~kil~~~~~~---------------~GH~~p~~~la~~L~~~G--h~V~~~~~~~~~~--------~---~------ 50 (459)
.++|.|++++..+ .|+..=.++||++|+++| |+|.++|-..... . +
T Consensus 167 ~~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~ELAraLa~~~gv~~Vdl~TR~~~~~~~~~~y~~p~e~~~~~~~~ 246 (1050)
T TIGR02468 167 EKKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPTEMLTPRSSE 246 (1050)
T ss_pred cCceEEEEEccccCccccCcccCCCCCCCChHHHHHHHHHHHHhCCCCCEEEEEeCCcCccccccccCCccccccccccc
Confidence 4678888887432 235555789999999998 8999998643211 1 1
Q ss_pred -------CCCCceEEEcCCCCCCCCCCCCCCHHHHHHHHHHhchHHHHHH----HHHhhc-CCCCccEEEeCCCc--hhH
Q 012645 51 -------HATTVGVEPISDGFDEGGFKQAPSVKAYLESFKTVGSRTLAEV----ILKYKD-SESPVNCIVYDSLL--TWA 116 (459)
Q Consensus 51 -------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~-~~~~~Dlvi~D~~~--~~~ 116 (459)
..+|+..+.+|.+...... ....++.++..|.+.+...+.++ .+++.. ....||+|-+.... ..+
T Consensus 247 ~~~~~~~~~~g~rIvRip~GP~~~~l-~Ke~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pDvIHaHyw~sG~aa 325 (1050)
T TIGR02468 247 NDGDEMGESSGAYIIRIPFGPRDKYI-PKEELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPYVIHGHYADAGDSA 325 (1050)
T ss_pred cccccccCCCCeEEEEeccCCCCCCc-CHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCEEEECcchHHHHH
Confidence 1247777777754332111 12344566666666555444432 222211 11259999988544 347
Q ss_pred HHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCcccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhc
Q 012645 117 LDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGS 196 (459)
Q Consensus 117 ~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (459)
..+++.+|||+|...++....-. .... .. +- .....+... ......+.-....
T Consensus 326 ~~L~~~lgVP~V~T~HSLgr~K~--~~ll----~~------------g~--~~~~~~~~~-------y~~~~Ri~~Ee~~ 378 (1050)
T TIGR02468 326 ALLSGALNVPMVLTGHSLGRDKL--EQLL----KQ------------GR--MSKEEINST-------YKIMRRIEAEELS 378 (1050)
T ss_pred HHHHHhhCCCEEEECccchhhhh--hhhc----cc------------cc--ccccccccc-------cchHHHHHHHHHH
Confidence 78888999999988765310000 0000 00 00 000000000 0011122222224
Q ss_pred ccCCceEEEcchhHhhHHHHHH--Hh--------------------cCCCeeeecccCCCccccccccC-C-ccCC----
Q 012645 197 LNKNDWVLCNSFEELEKELLRA--ML--------------------GLWPLVMIGPLVPSAYLDQQIAG-D-SAYG---- 248 (459)
Q Consensus 197 ~~~~~~~~~~~~~~l~~~~~~~--~~--------------------~~~~~~~vgp~~~~~~~~~~~~~-~-~~~g---- 248 (459)
+..++.++..|..+.+..+..+ +. ..+++..|.|=+....|...... + ...|
T Consensus 379 l~~Ad~VIasT~qE~~eq~~lY~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~ 458 (1050)
T TIGR02468 379 LDASEIVITSTRQEIEEQWGLYDGFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEH 458 (1050)
T ss_pred HHhcCEEEEeCHHHHHHHHHHhccCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhcccccc
Confidence 5678888988888776432221 00 01133333332222111111000 0 0000
Q ss_pred -CCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCC-----CcEEEEEeCCC--CCCc-------
Q 012645 249 -ANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASE-----KPFLWVVKENE--NKLP------- 313 (459)
Q Consensus 249 -~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~-----~~~v~~~~~~~--~~~~------- 313 (459)
.....+...++..|+.. +++ ++++..|..... ..+..+++|+..+. .++.++++..+ ..+.
T Consensus 459 ~~~~~~~~~~~l~r~~~~-pdk-pvIL~VGRL~p~--KGi~~LIeAf~~L~~l~~~~nL~LIiG~gdd~d~l~~~~~~~l 534 (1050)
T TIGR02468 459 PAKPDPPIWSEIMRFFTN-PRK-PMILALARPDPK--KNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSSGSSSVL 534 (1050)
T ss_pred cccccchhhHHHHhhccc-CCC-cEEEEEcCCccc--cCHHHHHHHHHHhHhhccCCCEEEEEecCchhhhhhccchHHH
Confidence 01011123356677754 333 566677876532 22344555554431 24444554422 1110
Q ss_pred hhhh---h--hcCCCceEEeeecHHH---HhcccC--ccceecc---Cch-hhHHHhhhcCCeeeccccccchhhHHHHH
Q 012645 314 VEFV---N--SVGETGLVVRWCNQFE---VLAHQA--VGCFITH---CGW-NSILEGLSLGVAVVAVPQFSDQPTNAKFV 379 (459)
Q Consensus 314 ~~~~---~--~~~~~v~v~~~~p~~~---lL~~~~--~~~~I~H---GG~-gs~~eal~~GvP~li~P~~~DQ~~na~rv 379 (459)
..+. + .+.++|.+.+++++.+ ++..++ .++||.- =|+ .++.||+++|+|+|+....+ ....+
T Consensus 535 ~~L~~li~~lgL~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG----~~EII 610 (1050)
T TIGR02468 535 TSVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGG----PVDIH 610 (1050)
T ss_pred HHHHHHHHHhCCCCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCC----cHHHh
Confidence 0111 1 1357788888888764 454442 1237764 344 58999999999999886432 22233
Q ss_pred HHhhhceEEeeecCCCcccHHHHHHHHHHHhcChh-hHHHHHHHHHH
Q 012645 380 EEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGER-SQKIKRNVSKW 425 (459)
Q Consensus 380 ~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~-~~~~~~~a~~l 425 (459)
+.- .-|..++ .-+++.|.++|.++++|++ .+.+.+++++.
T Consensus 611 ~~g-~nGlLVd-----P~D~eaLA~AL~~LL~Dpelr~~m~~~gr~~ 651 (1050)
T TIGR02468 611 RVL-DNGLLVD-----PHDQQAIADALLKLVADKQLWAECRQNGLKN 651 (1050)
T ss_pred ccC-CcEEEEC-----CCCHHHHHHHHHHHhhCHHHHHHHHHHHHHH
Confidence 333 4576665 4678999999999999873 23455554443
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.2e-06 Score=86.43 Aligned_cols=131 Identities=11% Similarity=0.055 Sum_probs=74.2
Q ss_pred CcEEEEEeCCccc-CCHHHHHHHHHHHHh--CCCcEEEEEeCCC-CCCchhhhh-hcCCCceEEeeecHH---HHhcccC
Q 012645 269 KSVIYVSFGSMAD-IAANQVDEIARGLKA--SEKPFLWVVKENE-NKLPVEFVN-SVGETGLVVRWCNQF---EVLAHQA 340 (459)
Q Consensus 269 ~~~V~vs~Gs~~~-~~~~~~~~i~~a~~~--~~~~~v~~~~~~~-~~~~~~~~~-~~~~~v~v~~~~p~~---~lL~~~~ 340 (459)
+..+++..|.... -..+.+...+..+.+ .+..++++..+.. +.+.+-... ...++|.+.+++|+. .+++.++
T Consensus 192 ~~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~l~~~~~~~~l~~~v~~~G~~~~~~~~~~l~~ad 271 (398)
T cd03796 192 DKITIVVISRLVYRKGIDLLVGIIPEICKKHPNVRFIIGGDGPKRILLEEMREKYNLQDRVELLGAVPHERVRDVLVQGH 271 (398)
T ss_pred CceEEEEEeccchhcCHHHHHHHHHHHHhhCCCEEEEEEeCCchHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhCC
Confidence 3477778887653 222333333333332 3444444432211 111111111 134678889999864 5777777
Q ss_pred ccceec---cCchh-hHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcCh
Q 012645 341 VGCFIT---HCGWN-SILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 341 ~~~~I~---HGG~g-s~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
+ +|. +-|.| ++.||+++|+|+|+....+ ....+ .. |-+ .+. ..+.+++.+++.+++++.
T Consensus 272 ~--~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg----~~e~i-~~-~~~-~~~-----~~~~~~l~~~l~~~l~~~ 334 (398)
T cd03796 272 I--FLNTSLTEAFCIAIVEAASCGLLVVSTRVGG----IPEVL-PP-DMI-LLA-----EPDVESIVRKLEEAISIL 334 (398)
T ss_pred E--EEeCChhhccCHHHHHHHHcCCCEEECCCCC----chhhe-eC-Cce-eec-----CCCHHHHHHHHHHHHhCh
Confidence 7 654 33444 9999999999999877542 22223 23 423 222 237899999999999864
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.7e-06 Score=83.87 Aligned_cols=80 Identities=14% Similarity=0.085 Sum_probs=56.1
Q ss_pred cCCCceEEeeecHH---HHhcccCccceecc----CchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeec
Q 012645 320 VGETGLVVRWCNQF---EVLAHQAVGCFITH----CGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKN 392 (459)
Q Consensus 320 ~~~~v~v~~~~p~~---~lL~~~~~~~~I~H----GG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~ 392 (459)
..+++.+.+++++. .++..+++ +|.- |-..++.||+++|+|+|+.+..+ ... +... +.|...+
T Consensus 260 ~~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~----~~~-~~~~-~~~~~~~-- 329 (375)
T cd03821 260 LEDRVTFTGMLYGEDKAAALADADL--FVLPSHSENFGIVVAEALACGTPVVTTDKVP----WQE-LIEY-GCGWVVD-- 329 (375)
T ss_pred ccceEEEcCCCChHHHHHHHhhCCE--EEeccccCCCCcHHHHHHhcCCCEEEcCCCC----HHH-Hhhc-CceEEeC--
Confidence 35788899999955 46777777 5543 22468999999999999876432 222 2223 5565544
Q ss_pred CCCcccHHHHHHHHHHHhcCh
Q 012645 393 RAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 393 ~~~~~~~~~l~~~i~~ll~~~ 413 (459)
.+.+++.++|.++++++
T Consensus 330 ----~~~~~~~~~i~~l~~~~ 346 (375)
T cd03821 330 ----DDVDALAAALRRALELP 346 (375)
T ss_pred ----CChHHHHHHHHHHHhCH
Confidence 34499999999999986
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=98.99 E-value=5.5e-07 Score=89.73 Aligned_cols=81 Identities=16% Similarity=0.161 Sum_probs=60.0
Q ss_pred CceEEeeecHH-HHhcccCccceecc-----CchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCc
Q 012645 323 TGLVVRWCNQF-EVLAHQAVGCFITH-----CGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGI 396 (459)
Q Consensus 323 ~v~v~~~~p~~-~lL~~~~~~~~I~H-----GG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~ 396 (459)
++.+.+..... .+++.+++ ++.. ||..++.||+++|+|+|.-|...++......+.+. |.+...
T Consensus 303 ~v~l~~~~~el~~~y~~aDi--~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~-g~~~~~------- 372 (425)
T PRK05749 303 DVLLGDTMGELGLLYAIADI--AFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQA-GAAIQV------- 372 (425)
T ss_pred cEEEEecHHHHHHHHHhCCE--EEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHC-CCeEEE-------
Confidence 35555544443 67877776 4432 34446999999999999999888888888877777 765432
Q ss_pred ccHHHHHHHHHHHhcCh
Q 012645 397 VTGEELNKCVNEVMDGE 413 (459)
Q Consensus 397 ~~~~~l~~~i~~ll~~~ 413 (459)
-++++|.+++.++++|+
T Consensus 373 ~d~~~La~~l~~ll~~~ 389 (425)
T PRK05749 373 EDAEDLAKAVTYLLTDP 389 (425)
T ss_pred CCHHHHHHHHHHHhcCH
Confidence 35789999999999987
|
|
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.98 E-value=2e-07 Score=89.35 Aligned_cols=131 Identities=14% Similarity=0.189 Sum_probs=78.9
Q ss_pred CCcEEEEEeCCcccCCHHHHHHHHHHHHhC-----CCcEEEEEeCCC-CCCchhhhh--hcCCCceEEeeecHH-HHhcc
Q 012645 268 EKSVIYVSFGSMADIAANQVDEIARGLKAS-----EKPFLWVVKENE-NKLPVEFVN--SVGETGLVVRWCNQF-EVLAH 338 (459)
Q Consensus 268 ~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~-----~~~~v~~~~~~~-~~~~~~~~~--~~~~~v~v~~~~p~~-~lL~~ 338 (459)
.++.+++..|+... ......++++++.+ +.+++++..... ..+. ...+ ...+++.+.++.+.. ++++.
T Consensus 187 ~~~~~i~~~g~~~~--~k~~~~~i~~~~~l~~~~~~~~l~i~G~~~~~~~~~-~~~~~~~~~~~v~~~g~~~~~~~~~~~ 263 (353)
T cd03811 187 PDGPVILAVGRLSP--QKGFDTLIRAFALLRKEGPDARLVILGDGPLREELE-ALAKELGLADRVHFLGFQSNPYPYLKA 263 (353)
T ss_pred CCceEEEEEecchh--hcChHHHHHHHHHhhhcCCCceEEEEcCCccHHHHH-HHHHhcCCCccEEEecccCCHHHHHHh
Confidence 34477788888653 22233444444442 344444432211 1111 1111 134678888887765 78888
Q ss_pred cCccceecc----CchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHH---HHHHHHHhc
Q 012645 339 QAVGCFITH----CGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEEL---NKCVNEVMD 411 (459)
Q Consensus 339 ~~~~~~I~H----GG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l---~~~i~~ll~ 411 (459)
+++ +|.- |..+++.||+++|+|+|+.... .....++.. +.|...+ .-+.+.+ .+.+.++++
T Consensus 264 ~d~--~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~----~~~e~i~~~-~~g~~~~-----~~~~~~~~~~~~~i~~~~~ 331 (353)
T cd03811 264 ADL--FVLSSRYEGFPNVLLEAMALGTPVVATDCP----GPREILEDG-ENGLLVP-----VGDEAALAAAALALLDLLL 331 (353)
T ss_pred CCE--EEeCcccCCCCcHHHHHHHhCCCEEEcCCC----ChHHHhcCC-CceEEEC-----CCCHHHHHHHHHHHHhccC
Confidence 887 6632 3456899999999999885443 556677777 8887776 4566666 566666666
Q ss_pred Ch
Q 012645 412 GE 413 (459)
Q Consensus 412 ~~ 413 (459)
++
T Consensus 332 ~~ 333 (353)
T cd03811 332 DP 333 (353)
T ss_pred Ch
Confidence 65
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.2e-06 Score=82.74 Aligned_cols=299 Identities=15% Similarity=0.159 Sum_probs=160.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCcc--ccccCCCCceEEEcCCCCCCCCCCCCCCHH-HHHHHHHH
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYT--VKSIHATTVGVEPISDGFDEGGFKQAPSVK-AYLESFKT 84 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 84 (459)
|||.+-- ...-|+.=+-.+.++|.++||+|.+.+-+.. .+.+...|++++.+...- .+.. +......+
T Consensus 1 MkIwiDi-~~p~hvhfFk~~I~eL~~~GheV~it~R~~~~~~~LL~~yg~~y~~iG~~g--------~~~~~Kl~~~~~R 71 (335)
T PF04007_consen 1 MKIWIDI-THPAHVHFFKNIIRELEKRGHEVLITARDKDETEELLDLYGIDYIVIGKHG--------DSLYGKLLESIER 71 (335)
T ss_pred CeEEEEC-CCchHHHHHHHHHHHHHhCCCEEEEEEeccchHHHHHHHcCCCeEEEcCCC--------CCHHHHHHHHHHH
Confidence 6666554 3444999999999999999999999987643 345666899999986321 1222 22222221
Q ss_pred hchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCcccCCC
Q 012645 85 VGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPG 164 (459)
Q Consensus 85 ~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~p~ 164 (459)
. ..+-.++.+. +||++|+- .+..+..+|.-+|+|+|.+.-...... ......|... .+.
T Consensus 72 ~--~~l~~~~~~~-----~pDv~is~-~s~~a~~va~~lgiP~I~f~D~e~a~~-------~~~Lt~Pla~---~i~--- 130 (335)
T PF04007_consen 72 Q--YKLLKLIKKF-----KPDVAISF-GSPEAARVAFGLGIPSIVFNDTEHAIA-------QNRLTLPLAD---VII--- 130 (335)
T ss_pred H--HHHHHHHHhh-----CCCEEEec-CcHHHHHHHHHhCCCeEEEecCchhhc-------cceeehhcCC---eeE---
Confidence 1 2233344443 89999975 557788899999999999876541110 0000011000 000
Q ss_pred CCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEE-EcchhHhhHHHHHHHhcCCCeeeecccCCCccccccccC
Q 012645 165 LPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVL-CNSFEELEKELLRAMLGLWPLVMIGPLVPSAYLDQQIAG 243 (459)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~vgp~~~~~~~~~~~~~ 243 (459)
.|..+. ...+.+... + +.+. .+.+.| +.++-|.
T Consensus 131 --------~P~~~~--------~~~~~~~G~---~-~~i~~y~G~~E--------------~ayl~~F------------ 164 (335)
T PF04007_consen 131 --------TPEAIP--------KEFLKRFGA---K-NQIRTYNGYKE--------------LAYLHPF------------ 164 (335)
T ss_pred --------CCcccC--------HHHHHhcCC---c-CCEEEECCeee--------------EEeecCC------------
Confidence 011000 000011100 0 1111 122221 2222221
Q ss_pred CccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCccc----CCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhh
Q 012645 244 DSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMAD----IAANQVDEIARGLKASEKPFLWVVKENENKLPVEFVNS 319 (459)
Q Consensus 244 ~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~----~~~~~~~~i~~a~~~~~~~~v~~~~~~~~~~~~~~~~~ 319 (459)
+|+++ ..+-+.. ++++.|++=+-+... .....+..+++.+++.+.. |+.++..+ ..++-+. .
T Consensus 165 ---------~Pd~~-vl~~lg~-~~~~yIvvR~~~~~A~y~~~~~~i~~~ii~~L~~~~~~-vV~ipr~~-~~~~~~~-~ 230 (335)
T PF04007_consen 165 ---------KPDPE-VLKELGL-DDEPYIVVRPEAWKASYDNGKKSILPEIIEELEKYGRN-VVIIPRYE-DQRELFE-K 230 (335)
T ss_pred ---------CCChh-HHHHcCC-CCCCEEEEEeccccCeeecCccchHHHHHHHHHhhCce-EEEecCCc-chhhHHh-c
Confidence 12122 2223322 244577776655321 2345567788889888776 44444322 1111111 1
Q ss_pred cCCCceEE-eeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCccc
Q 012645 320 VGETGLVV-RWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVT 398 (459)
Q Consensus 320 ~~~~v~v~-~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~ 398 (459)
. ++.+. .-+....||.++++ +|+-|| ++..||...|+|.|.+ +.++-...-+.+.+. |+ ... ..+
T Consensus 231 ~--~~~i~~~~vd~~~Ll~~a~l--~Ig~gg-TMa~EAA~LGtPaIs~-~~g~~~~vd~~L~~~-Gl--l~~-----~~~ 296 (335)
T PF04007_consen 231 Y--GVIIPPEPVDGLDLLYYADL--VIGGGG-TMAREAALLGTPAISC-FPGKLLAVDKYLIEK-GL--LYH-----STD 296 (335)
T ss_pred c--CccccCCCCCHHHHHHhcCE--EEeCCc-HHHHHHHHhCCCEEEe-cCCcchhHHHHHHHC-CC--eEe-----cCC
Confidence 1 13333 44555589988998 999887 8999999999999975 222322333456777 54 333 466
Q ss_pred HHHHHHHHHHHh
Q 012645 399 GEELNKCVNEVM 410 (459)
Q Consensus 399 ~~~l~~~i~~ll 410 (459)
++++.+.+.+.+
T Consensus 297 ~~ei~~~v~~~~ 308 (335)
T PF04007_consen 297 PDEIVEYVRKNL 308 (335)
T ss_pred HHHHHHHHHHhh
Confidence 777777555544
|
They are found in archaea and some bacteria and have no known function. |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.2e-06 Score=84.93 Aligned_cols=318 Identities=14% Similarity=0.074 Sum_probs=161.9
Q ss_pred CCccCHHHHHHHHHHHHhCCCeEEEEecCcc-ccccCCCCceEEEcCCCCCCCCCCCCCCHHHHHHHHHHhchHHHHHHH
Q 012645 16 PAQGHINPLLQFAKRLASKRVKATLATTHYT-VKSIHATTVGVEPISDGFDEGGFKQAPSVKAYLESFKTVGSRTLAEVI 94 (459)
Q Consensus 16 ~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 94 (459)
...|--.-+..||++|+++||+|++++.... ...++..|++++.++.. . ......+..+ ..+..++
T Consensus 8 ~~gG~e~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~--~------~~~~~~~~~~-----~~l~~~~ 74 (355)
T cd03819 8 ESGGVERGTLELARALVERGHRSLVASAGGRLVAELEAEGSRHIKLPFI--S------KNPLRILLNV-----ARLRRLI 74 (355)
T ss_pred ccCcHHHHHHHHHHHHHHcCCEEEEEcCCCchHHHHHhcCCeEEEcccc--c------cchhhhHHHH-----HHHHHHH
Confidence 3456666788999999999999999986432 23344457777666421 0 1111111111 1223333
Q ss_pred HHhhcCCCCccEEEeCCCc--hhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCcccCCCCCCCCCCC
Q 012645 95 LKYKDSESPVNCIVYDSLL--TWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPGLPSLASSD 172 (459)
Q Consensus 95 ~~~~~~~~~~Dlvi~D~~~--~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~ 172 (459)
++. +||+|++.... ..+..+++.+++|++...+...... .
T Consensus 75 ~~~-----~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~-----------------------------~---- 116 (355)
T cd03819 75 REE-----KVDIVHARSRAPAWSAYLAARRTRPPFVTTVHGFYSVN-----------------------------F---- 116 (355)
T ss_pred HHc-----CCCEEEECCCchhHHHHHHHHhcCCCEEEEeCCchhhH-----------------------------H----
Confidence 332 89999987543 2345566788999987654321000 0
Q ss_pred CCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHh-cCCCeeeecccCCCccccccccCCccCCCCC
Q 012645 173 LPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAML-GLWPLVMIGPLVPSAYLDQQIAGDSAYGANI 251 (459)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~vgp~~~~~~~~~~~~~~~~~g~~~ 251 (459)
.... .+..++.+++.+-...+. ...... ...++..++..++...+..
T Consensus 117 ----------------~~~~---~~~~~~~vi~~s~~~~~~-~~~~~~~~~~k~~~i~ngi~~~~~~~------------ 164 (355)
T cd03819 117 ----------------RYNA---IMARGDRVIAVSNFIADH-IRENYGVDPDRIRVIPRGVDLDRFDP------------ 164 (355)
T ss_pred ----------------HHHH---HHHhcCEEEEeCHHHHHH-HHHhcCCChhhEEEecCCccccccCc------------
Confidence 0001 123456666655433222 111111 0113444443222211100
Q ss_pred CCCChhhh---hhhhccCCCCcEEEEEeCCccc-CCHHHHHHHHHHHHhC--CCcEEEEEeCCC-CCCchhhh---h--h
Q 012645 252 WEPTGDQC---MRWLATKPEKSVIYVSFGSMAD-IAANQVDEIARGLKAS--EKPFLWVVKENE-NKLPVEFV---N--S 319 (459)
Q Consensus 252 ~~~~~~~l---~~~l~~~~~~~~V~vs~Gs~~~-~~~~~~~~i~~a~~~~--~~~~v~~~~~~~-~~~~~~~~---~--~ 319 (459)
......+. .+-+.. +++..+++..|+... -..+.+-..+..+... +.+++++..... ......+. . .
T Consensus 165 ~~~~~~~~~~~~~~~~~-~~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~ 243 (355)
T cd03819 165 GAVPPERILALAREWPL-PKGKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLIVGDAQGRRFYYAELLELIKRLG 243 (355)
T ss_pred cccchHHHHHHHHHcCC-CCCceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEEEECCcccchHHHHHHHHHHHcC
Confidence 00001111 111111 233467777787653 2344454555555543 344444433221 11211111 1 2
Q ss_pred cCCCceEEeeecHH-HHhcccCccceec--cCch-hhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCC
Q 012645 320 VGETGLVVRWCNQF-EVLAHQAVGCFIT--HCGW-NSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAG 395 (459)
Q Consensus 320 ~~~~v~v~~~~p~~-~lL~~~~~~~~I~--HGG~-gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~ 395 (459)
..++|++.++.+.. .+++.+++-.+-+ +-|+ +++.||+++|+|+|+.-. ......+... +.|..++
T Consensus 244 ~~~~v~~~g~~~~~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~----~~~~e~i~~~-~~g~~~~----- 313 (355)
T cd03819 244 LQDRVTFVGHCSDMPAAYALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDH----GGARETVRPG-ETGLLVP----- 313 (355)
T ss_pred CcceEEEcCCcccHHHHHHhCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCC----CCcHHHHhCC-CceEEeC-----
Confidence 34678888886544 7888888833323 2333 599999999999987653 2344455555 5787765
Q ss_pred cccHHHHHHHHHHHhc-Chh-hHHHHHHHHHHHH
Q 012645 396 IVTGEELNKCVNEVMD-GER-SQKIKRNVSKWRE 427 (459)
Q Consensus 396 ~~~~~~l~~~i~~ll~-~~~-~~~~~~~a~~l~~ 427 (459)
.-+.+.+.++|..++. +++ .+++++++++..+
T Consensus 314 ~~~~~~l~~~i~~~~~~~~~~~~~~~~~a~~~~~ 347 (355)
T cd03819 314 PGDAEALAQALDQILSLLPEGRAKMFAKARMCVE 347 (355)
T ss_pred CCCHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 4688999999976654 442 2334444444443
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=98.95 E-value=1.5e-06 Score=84.14 Aligned_cols=133 Identities=16% Similarity=0.177 Sum_probs=79.3
Q ss_pred CcEEEEEeCCccc-CCHHHHHHHHHHHHhC--CCcEEEEEeCCC-CCCchhhhh-hcCCCceEEeeecHH---HHhcccC
Q 012645 269 KSVIYVSFGSMAD-IAANQVDEIARGLKAS--EKPFLWVVKENE-NKLPVEFVN-SVGETGLVVRWCNQF---EVLAHQA 340 (459)
Q Consensus 269 ~~~V~vs~Gs~~~-~~~~~~~~i~~a~~~~--~~~~v~~~~~~~-~~~~~~~~~-~~~~~v~v~~~~p~~---~lL~~~~ 340 (459)
++.+++.+|+... -..+.+...+..+... +..++++..... ..+.....+ ...++|.+.+++|+. .+++.++
T Consensus 178 ~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~ad 257 (355)
T cd03799 178 EPLRILSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGDGPLRDELEALIAELGLEDRVTLLGAKSQEEVRELLRAAD 257 (355)
T ss_pred CCeEEEEEeeeccccCHHHHHHHHHHHhhcCCCeEEEEEECCccHHHHHHHHHHcCCCCeEEECCcCChHHHHHHHHhCC
Confidence 3466677777643 2233333333444333 334444432211 111111111 135789999999755 5676777
Q ss_pred ccceec----------cCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHh
Q 012645 341 VGCFIT----------HCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVM 410 (459)
Q Consensus 341 ~~~~I~----------HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll 410 (459)
+ +|. -|..+++.||+++|+|+|+.+... ....++.. ..|..+. .-+.+++.++|.+++
T Consensus 258 i--~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~----~~~~i~~~-~~g~~~~-----~~~~~~l~~~i~~~~ 325 (355)
T cd03799 258 L--FVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSG----IPELVEDG-ETGLLVP-----PGDPEALADAIERLL 325 (355)
T ss_pred E--EEecceecCCCCccCccHHHHHHHHcCCCEEecCCCC----cchhhhCC-CceEEeC-----CCCHHHHHHHHHHHH
Confidence 7 665 234578999999999999866432 22344444 4776665 458999999999999
Q ss_pred cCh
Q 012645 411 DGE 413 (459)
Q Consensus 411 ~~~ 413 (459)
+++
T Consensus 326 ~~~ 328 (355)
T cd03799 326 DDP 328 (355)
T ss_pred hCH
Confidence 987
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.94 E-value=3.1e-07 Score=88.18 Aligned_cols=129 Identities=15% Similarity=0.106 Sum_probs=78.8
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCC-CCCchhhhhh--cCCCceEEeeecHH---HHhcccCccce
Q 012645 271 VIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENE-NKLPVEFVNS--VGETGLVVRWCNQF---EVLAHQAVGCF 344 (459)
Q Consensus 271 ~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~-~~~~~~~~~~--~~~~v~v~~~~p~~---~lL~~~~~~~~ 344 (459)
.+++..|.... ......++++++..+.+++++..... ..+.....+. ..+++.+.+++++. .+++.+++-++
T Consensus 172 ~~i~~~Gr~~~--~Kg~~~li~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~d~~v~ 249 (335)
T cd03802 172 DYLLFLGRISP--EKGPHLAIRAARRAGIPLKLAGPVSDPDYFYREIAPELLDGPDIEYLGEVGGAEKAELLGNARALLF 249 (335)
T ss_pred CEEEEEEeecc--ccCHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhCcEEEe
Confidence 44555677642 23345577788888877776654422 1111111112 25789999999876 46777777333
Q ss_pred ec--cCch-hhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcCh
Q 012645 345 IT--HCGW-NSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 345 I~--HGG~-gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
-+ +-|. .++.||+++|+|+|+.... .....++.. ..|...+ . .+++.+++.+++...
T Consensus 250 ps~~~E~~~~~~lEAma~G~PvI~~~~~----~~~e~i~~~-~~g~l~~-----~--~~~l~~~l~~l~~~~ 309 (335)
T cd03802 250 PILWEEPFGLVMIEAMACGTPVIAFRRG----AVPEVVEDG-VTGFLVD-----S--VEELAAAVARADRLD 309 (335)
T ss_pred CCcccCCcchHHHHHHhcCCCEEEeCCC----CchhheeCC-CcEEEeC-----C--HHHHHHHHHHHhccH
Confidence 23 2344 5899999999999977653 222333333 3555443 3 899999999887653
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >PRK14089 ipid-A-disaccharide synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=1.7e-07 Score=89.17 Aligned_cols=156 Identities=18% Similarity=0.109 Sum_probs=94.3
Q ss_pred cEEEEEeCCcccCCHHHHHHHHHHHHhCCCc-EEEEEeCCCCCCchhhhhhcC--CCceEEeeecHHHHhcccCccceec
Q 012645 270 SVIYVSFGSMADIAANQVDEIARGLKASEKP-FLWVVKENENKLPVEFVNSVG--ETGLVVRWCNQFEVLAHQAVGCFIT 346 (459)
Q Consensus 270 ~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~-~v~~~~~~~~~~~~~~~~~~~--~~v~v~~~~p~~~lL~~~~~~~~I~ 346 (459)
++|.+--||....-...+-.++++...+..+ .++.+..... . +.+.+... ..+.+.+ .-.++++.+|+ +|+
T Consensus 168 ~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~~~~~i~~a~~-~-~~i~~~~~~~~~~~~~~--~~~~~m~~aDl--al~ 241 (347)
T PRK14089 168 GTIAFMPGSRKSEIKRLMPIFKELAKKLEGKEKILVVPSFFK-G-KDLKEIYGDISEFEISY--DTHKALLEAEF--AFI 241 (347)
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCcEEEEeCCCc-H-HHHHHHHhcCCCcEEec--cHHHHHHhhhH--HHh
Confidence 5899999998653223444344555443221 2333322111 1 22222121 1222332 23478988888 999
Q ss_pred cCchhhHHHhhhcCCeeecccc--ccchhhHHHHHH---HhhhceEEe-------------eecCCCcccHHHHHHHHHH
Q 012645 347 HCGWNSILEGLSLGVAVVAVPQ--FSDQPTNAKFVE---EVWEVGVRA-------------KKNRAGIVTGEELNKCVNE 408 (459)
Q Consensus 347 HGG~gs~~eal~~GvP~li~P~--~~DQ~~na~rv~---~~~G~G~~~-------------~~~~~~~~~~~~l~~~i~~ 408 (459)
-.|..|. |++.+|+|+|+ +. ..=|..||+++. .. |+...+ ..+ ++|++.|.+.+.+
T Consensus 242 ~SGT~TL-E~al~g~P~Vv-~Yk~~~lty~iak~lv~~~~i-gL~Nii~~~~~~~~vvPEllQ~---~~t~~~la~~i~~ 315 (347)
T PRK14089 242 CSGTATL-EAALIGTPFVL-AYKAKAIDYFIAKMFVKLKHI-GLANIFFDFLGKEPLHPELLQE---FVTVENLLKAYKE 315 (347)
T ss_pred cCcHHHH-HHHHhCCCEEE-EEeCCHHHHHHHHHHHcCCee-ehHHHhcCCCcccccCchhhcc---cCCHHHHHHHHHH
Confidence 9999999 99999999988 54 346889999999 66 766555 334 7999999999987
Q ss_pred HhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHH
Q 012645 409 VMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEF 446 (459)
Q Consensus 409 ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~ 446 (459)
. .. +.+++...++++.+. ++.+..+++.+
T Consensus 316 ~-~~---~~~~~~~~~l~~~l~-----~~a~~~~A~~i 344 (347)
T PRK14089 316 M-DR---EKFFKKSKELREYLK-----HGSAKNVAKIL 344 (347)
T ss_pred H-HH---HHHHHHHHHHHHHhc-----CCHHHHHHHHH
Confidence 2 11 256666666666552 24445554443
|
|
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=98.88 E-value=2.7e-06 Score=82.87 Aligned_cols=82 Identities=18% Similarity=0.145 Sum_probs=63.0
Q ss_pred cCCCceEEeeecHH---HHhcccCccceecc----------CchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhce
Q 012645 320 VGETGLVVRWCNQF---EVLAHQAVGCFITH----------CGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVG 386 (459)
Q Consensus 320 ~~~~v~v~~~~p~~---~lL~~~~~~~~I~H----------GG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G 386 (459)
..+++.+.+++|+. .+++.+++ +|.- |-.+++.||+++|+|+|+.+.. .++..+... +.|
T Consensus 243 ~~~~v~~~g~~~~~~l~~~~~~ad~--~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~----~~~e~i~~~-~~g 315 (367)
T cd05844 243 LGGRVTFLGAQPHAEVRELMRRARI--FLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHG----GIPEAVEDG-ETG 315 (367)
T ss_pred CCCeEEECCCCCHHHHHHHHHhCCE--EEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCC----CchhheecC-Cee
Confidence 35788888999865 45877777 6632 2357999999999999987653 356666677 778
Q ss_pred EEeeecCCCcccHHHHHHHHHHHhcCh
Q 012645 387 VRAKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 387 ~~~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
..++ ..+.+++.++|.++++|+
T Consensus 316 ~~~~-----~~d~~~l~~~i~~l~~~~ 337 (367)
T cd05844 316 LLVP-----EGDVAALAAALGRLLADP 337 (367)
T ss_pred EEEC-----CCCHHHHHHHHHHHHcCH
Confidence 7666 457899999999999987
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.1e-06 Score=85.49 Aligned_cols=133 Identities=14% Similarity=0.165 Sum_probs=79.8
Q ss_pred cEEEEEeCCcccCCHHHHHHHHHHHHhC--CCcEEEEEeCCC-CCCchhhhh-hcCCCceEEeeecH--H---HHhcccC
Q 012645 270 SVIYVSFGSMADIAANQVDEIARGLKAS--EKPFLWVVKENE-NKLPVEFVN-SVGETGLVVRWCNQ--F---EVLAHQA 340 (459)
Q Consensus 270 ~~V~vs~Gs~~~~~~~~~~~i~~a~~~~--~~~~v~~~~~~~-~~~~~~~~~-~~~~~v~v~~~~p~--~---~lL~~~~ 340 (459)
+.+++..|.........+..+++++... +.+++++..+.+ +.+.....+ ..+++|.+.+++++ . +.++.++
T Consensus 180 ~~~i~~~Grl~~~~~k~~~~l~~a~~~~~~~~~l~ivG~g~~~~~l~~~~~~~~l~~~v~f~G~~~~~~~~~~~~~~~~d 259 (359)
T PRK09922 180 PAVFLYVGRLKFEGQKNVKELFDGLSQTTGEWQLHIIGDGSDFEKCKAYSRELGIEQRIIWHGWQSQPWEVVQQKIKNVS 259 (359)
T ss_pred CcEEEEEEEEecccCcCHHHHHHHHHhhCCCeEEEEEeCCccHHHHHHHHHHcCCCCeEEEecccCCcHHHHHHHHhcCc
Confidence 3566777776432233455666666654 334444433221 111111111 23578999998753 3 3344456
Q ss_pred ccceecc----CchhhHHHhhhcCCeeeccc-cccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcChh
Q 012645 341 VGCFITH----CGWNSILEGLSLGVAVVAVP-QFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGER 414 (459)
Q Consensus 341 ~~~~I~H----GG~gs~~eal~~GvP~li~P-~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~ 414 (459)
+ +|.. |-..++.||+++|+|+|+.- ..+ ....++.- ..|..++ .-+.+++.++|.++++|++
T Consensus 260 ~--~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g----~~eiv~~~-~~G~lv~-----~~d~~~la~~i~~l~~~~~ 326 (359)
T PRK09922 260 A--LLLTSKFEGFPMTLLEAMSYGIPCISSDCMSG----PRDIIKPG-LNGELYT-----PGNIDEFVGKLNKVISGEV 326 (359)
T ss_pred E--EEECCcccCcChHHHHHHHcCCCEEEeCCCCC----hHHHccCC-CceEEEC-----CCCHHHHHHHHHHHHhCcc
Confidence 5 6643 33579999999999999865 322 22344444 5676665 5689999999999999983
|
|
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.86 E-value=4.2e-06 Score=81.14 Aligned_cols=81 Identities=11% Similarity=0.171 Sum_probs=59.2
Q ss_pred cCCCceEEe-eecHH---HHhcccCccceec----c--CchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEe
Q 012645 320 VGETGLVVR-WCNQF---EVLAHQAVGCFIT----H--CGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRA 389 (459)
Q Consensus 320 ~~~~v~v~~-~~p~~---~lL~~~~~~~~I~----H--GG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~ 389 (459)
..++|.+.+ |+|+. .+++.+++ +|. - |..+++.||+++|+|+|+.+... ...+... +.|..+
T Consensus 245 ~~~~v~~~~~~~~~~~~~~~~~~ad~--~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-----~~~i~~~-~~g~~~ 316 (366)
T cd03822 245 LADRVIFINRYLPDEELPELFSAADV--VVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-----AEEVLDG-GTGLLV 316 (366)
T ss_pred CCCcEEEecCcCCHHHHHHHHhhcCE--EEecccccccccchHHHHHHHcCCCEEecCCCC-----hheeeeC-CCcEEE
Confidence 457888875 48864 67877777 663 2 34568999999999999877543 3345556 677666
Q ss_pred eecCCCcccHHHHHHHHHHHhcCh
Q 012645 390 KKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 390 ~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
. .-+.+++.+++.++++|+
T Consensus 317 ~-----~~d~~~~~~~l~~l~~~~ 335 (366)
T cd03822 317 P-----PGDPAALAEAIRRLLADP 335 (366)
T ss_pred c-----CCCHHHHHHHHHHHHcCh
Confidence 6 456899999999999985
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.82 E-value=6.4e-06 Score=79.83 Aligned_cols=133 Identities=12% Similarity=0.069 Sum_probs=78.1
Q ss_pred CCcEEEEEeCCccc-CCHHHHHHHHHHHHhC--CCcEEEEEeCCC-CCCchhhh-hhcCCCceEEeeecHH-HHhcccCc
Q 012645 268 EKSVIYVSFGSMAD-IAANQVDEIARGLKAS--EKPFLWVVKENE-NKLPVEFV-NSVGETGLVVRWCNQF-EVLAHQAV 341 (459)
Q Consensus 268 ~~~~V~vs~Gs~~~-~~~~~~~~i~~a~~~~--~~~~v~~~~~~~-~~~~~~~~-~~~~~~v~v~~~~p~~-~lL~~~~~ 341 (459)
+++.+++..|+... -..+.+-..+..+... +.+++++..... ..+..... ....+++.+.++..+. ++++.+++
T Consensus 190 ~~~~~i~~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adi 269 (358)
T cd03812 190 EDKFVIGHVGRFSEQKNHEFLIEIFAELLKKNPNAKLLLVGDGELEEEIKKKVKELGLEDKVIFLGVRNDVPELLQAMDV 269 (358)
T ss_pred CCCEEEEEEeccccccChHHHHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhcCCCCcEEEecccCCHHHHHHhcCE
Confidence 34477778888653 2334444444444332 344444432211 11111111 1235778888875443 78888887
Q ss_pred cceecc----CchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcCh
Q 012645 342 GCFITH----CGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 342 ~~~I~H----GG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
+|+- |-..++.||+++|+|+|+....+- ...++ . +.|.... .-+++++.++|.++++|+
T Consensus 270 --~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~~----~~~i~-~-~~~~~~~-----~~~~~~~a~~i~~l~~~~ 332 (358)
T cd03812 270 --FLFPSLYEGLPLVLIEAQASGLPCILSDTITK----EVDLT-D-LVKFLSL-----DESPEIWAEEILKLKSED 332 (358)
T ss_pred --EEecccccCCCHHHHHHHHhCCCEEEEcCCch----hhhhc-c-CccEEeC-----CCCHHHHHHHHHHHHhCc
Confidence 6653 445799999999999988665432 22222 2 3343333 356899999999999998
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.7e-05 Score=79.26 Aligned_cols=84 Identities=11% Similarity=0.166 Sum_probs=58.6
Q ss_pred cCCCceEEeeecHHH---Hhccc--CccceeccC---c-hhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEee
Q 012645 320 VGETGLVVRWCNQFE---VLAHQ--AVGCFITHC---G-WNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAK 390 (459)
Q Consensus 320 ~~~~v~v~~~~p~~~---lL~~~--~~~~~I~HG---G-~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~ 390 (459)
..++|.+.+++++.+ +++.+ ++++||... | ..+++||+++|+|+|+.... .....++.. ..|..++
T Consensus 315 l~~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~g----g~~eiv~~~-~~G~lv~ 389 (439)
T TIGR02472 315 LYGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDG----GPRDIIANC-RNGLLVD 389 (439)
T ss_pred CCceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCCC----CcHHHhcCC-CcEEEeC
Confidence 357788888887665 46544 123377643 3 35999999999999887643 344444444 5676665
Q ss_pred ecCCCcccHHHHHHHHHHHhcCh
Q 012645 391 KNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 391 ~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
.-+++.+.++|.++++|+
T Consensus 390 -----~~d~~~la~~i~~ll~~~ 407 (439)
T TIGR02472 390 -----VLDLEAIASALEDALSDS 407 (439)
T ss_pred -----CCCHHHHHHHHHHHHhCH
Confidence 457899999999999987
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=98.79 E-value=2e-06 Score=83.52 Aligned_cols=314 Identities=12% Similarity=0.077 Sum_probs=162.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEecCcccc--------ccCCCCceEEEcCCCCCCCCC-CCCCCHHH
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASK-RVKATLATTHYTVK--------SIHATTVGVEPISDGFDEGGF-KQAPSVKA 77 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~-Gh~V~~~~~~~~~~--------~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~ 77 (459)
|||++++ |++-.+.-+.++.++|++. +.++.++.+..+.+ .+...|+... + .++-... ....++..
T Consensus 1 ~ki~~v~-GtRpe~iklapv~~~l~~~~~~~~~lv~tGqH~~~~~g~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~ 76 (365)
T TIGR03568 1 KKICVVT-GTRADYGLLRPLLKALQDDPDLELQLIVTGMHLSPEYGNTVNEIEKDGFDID--E-KIEILLDSDSNAGMAK 76 (365)
T ss_pred CeEEEEE-ecChhHHHHHHHHHHHhcCCCCcEEEEEeCCCCChhhccHHHHHHHcCCCCC--C-ccccccCCCCCCCHHH
Confidence 5677665 8888888899999999874 78988888776542 1222344321 1 1111000 11122222
Q ss_pred HHHHHHHhchHHHHHHHHHhhcCCCCccEEEeC--CCc-hhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCC
Q 012645 78 YLESFKTVGSRTLAEVILKYKDSESPVNCIVYD--SLL-TWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVN 154 (459)
Q Consensus 78 ~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D--~~~-~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~ 154 (459)
..... ...+.+++++. +||+||+- ... .++..+|..+|||++.+.-.-
T Consensus 77 ~~~~~----~~~~~~~~~~~-----~Pd~vlv~GD~~~~la~alaA~~~~IPv~HveaG~-------------------- 127 (365)
T TIGR03568 77 SMGLT----IIGFSDAFERL-----KPDLVVVLGDRFEMLAAAIAAALLNIPIAHIHGGE-------------------- 127 (365)
T ss_pred HHHHH----HHHHHHHHHHh-----CCCEEEEeCCchHHHHHHHHHHHhCCcEEEEECCc--------------------
Confidence 22221 23445555654 89999854 333 357889999999999765422
Q ss_pred CCCCcccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcCCCeeeecccCCC
Q 012645 155 QETVPLTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPS 234 (459)
Q Consensus 155 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vgp~~~~ 234 (459)
.... .+ .+..++.... -++..++++-...+. ....-.+-.+++.+|...-+
T Consensus 128 -------------rs~~-~~------------eE~~r~~i~~--la~l~f~~t~~~~~~-L~~eg~~~~~i~~tG~~~iD 178 (365)
T TIGR03568 128 -------------VTEG-AI------------DESIRHAITK--LSHLHFVATEEYRQR-VIQMGEDPDRVFNVGSPGLD 178 (365)
T ss_pred -------------cCCC-Cc------------hHHHHHHHHH--HHhhccCCCHHHHHH-HHHcCCCCCcEEEECCcHHH
Confidence 0000 00 0111111110 011122222221111 00000001236666643322
Q ss_pred ccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcc--c-CCHHHHHHHHHHHHhCCCcEEEEEeCCC--
Q 012645 235 AYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMA--D-IAANQVDEIARGLKASEKPFLWVVKENE-- 309 (459)
Q Consensus 235 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~--~-~~~~~~~~i~~a~~~~~~~~v~~~~~~~-- 309 (459)
....- .....+++.+.+.-.++++.|+|++=... . ...+.+..+++++...+.+++++.....
T Consensus 179 ~l~~~------------~~~~~~~~~~~lgl~~~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~~vi~P~~~p~ 246 (365)
T TIGR03568 179 NILSL------------DLLSKEELEEKLGIDLDKPYALVTFHPVTLEKESAEEQIKELLKALDELNKNYIFTYPNADAG 246 (365)
T ss_pred HHHhh------------hccCHHHHHHHhCCCCCCCEEEEEeCCCcccccCchHHHHHHHHHHHHhccCCEEEEeCCCCC
Confidence 11000 00012223333222223458778875543 2 4457789999999888766666654331
Q ss_pred C-CCchhhhhhc--CCCceEEeeec---HHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhh
Q 012645 310 N-KLPVEFVNSV--GETGLVVRWCN---QFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVW 383 (459)
Q Consensus 310 ~-~~~~~~~~~~--~~~v~v~~~~p---~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~ 383 (459)
. ...+.+.+.. .+++.+.+-++ ...+++++++ +|+-++.+. .||.+.|||.|.+- + |-+-.
T Consensus 247 ~~~i~~~i~~~~~~~~~v~l~~~l~~~~~l~Ll~~a~~--vitdSSggi-~EA~~lg~Pvv~l~---~------R~e~~- 313 (365)
T TIGR03568 247 SRIINEAIEEYVNEHPNFRLFKSLGQERYLSLLKNADA--VIGNSSSGI-IEAPSFGVPTINIG---T------RQKGR- 313 (365)
T ss_pred chHHHHHHHHHhcCCCCEEEECCCChHHHHHHHHhCCE--EEEcChhHH-HhhhhcCCCEEeec---C------Cchhh-
Confidence 1 1111222111 36788886554 4478878888 998886666 99999999999774 2 22222
Q ss_pred hceEEeeecCCCcccHHHHHHHHHHHhc
Q 012645 384 EVGVRAKKNRAGIVTGEELNKCVNEVMD 411 (459)
Q Consensus 384 G~G~~~~~~~~~~~~~~~l~~~i~~ll~ 411 (459)
-.|..+..- ..+++.|.+++.++++
T Consensus 314 ~~g~nvl~v---g~~~~~I~~a~~~~~~ 338 (365)
T TIGR03568 314 LRADSVIDV---DPDKEEIVKAIEKLLD 338 (365)
T ss_pred hhcCeEEEe---CCCHHHHHHHHHHHhC
Confidence 224332212 4678999999999554
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=98.77 E-value=5.6e-06 Score=80.26 Aligned_cols=125 Identities=12% Similarity=0.173 Sum_probs=76.0
Q ss_pred CcEEEEEeCCcccCCHHHHHHHHHHHHh-----CCCcEEEEEeCCCCCCchhhhh-----hcCCCceEEeeecHH-HHhc
Q 012645 269 KSVIYVSFGSMADIAANQVDEIARGLKA-----SEKPFLWVVKENENKLPVEFVN-----SVGETGLVVRWCNQF-EVLA 337 (459)
Q Consensus 269 ~~~V~vs~Gs~~~~~~~~~~~i~~a~~~-----~~~~~v~~~~~~~~~~~~~~~~-----~~~~~v~v~~~~p~~-~lL~ 337 (459)
+..+++..|+... ......++++++. .+.+++++..+. ..+.+.+ ...+++.+.++..+. .+++
T Consensus 187 ~~~~~l~~g~~~~--~kg~~~li~a~~~l~~~~~~~~l~i~G~g~---~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~ 261 (360)
T cd04951 187 DTFVILAVGRLVE--AKDYPNLLKAFAKLLSDYLDIKLLIAGDGP---LRATLERLIKALGLSNRVKLLGLRDDIAAYYN 261 (360)
T ss_pred CCEEEEEEeeCch--hcCcHHHHHHHHHHHhhCCCeEEEEEcCCC---cHHHHHHHHHhcCCCCcEEEecccccHHHHHH
Confidence 3477788887643 2223334444433 245666554322 1122211 134678888877554 7888
Q ss_pred ccCccceecc----CchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcC
Q 012645 338 HQAVGCFITH----CGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDG 412 (459)
Q Consensus 338 ~~~~~~~I~H----GG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~ 412 (459)
.+++ +|.- |..+++.||+++|+|+|+. |...+...++.. |. .+. .-+.+++.+++.+++++
T Consensus 262 ~ad~--~v~~s~~e~~~~~~~Ea~a~G~PvI~~----~~~~~~e~i~~~-g~--~~~-----~~~~~~~~~~i~~ll~~ 326 (360)
T cd04951 262 AADL--FVLSSAWEGFGLVVAEAMACELPVVAT----DAGGVREVVGDS-GL--IVP-----ISDPEALANKIDEILKM 326 (360)
T ss_pred hhce--EEecccccCCChHHHHHHHcCCCEEEe----cCCChhhEecCC-ce--EeC-----CCCHHHHHHHHHHHHhC
Confidence 8887 5543 2257899999999999874 444555555555 43 343 45788999999999943
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.77 E-value=2.6e-05 Score=75.15 Aligned_cols=129 Identities=15% Similarity=0.166 Sum_probs=75.6
Q ss_pred CcEEEEEeCCcccCCHHHHHHHHHHHHh-----CCCcEEEEEeCCCCCCchhhh---hhcCCCceEEeeecHH-HHhccc
Q 012645 269 KSVIYVSFGSMADIAANQVDEIARGLKA-----SEKPFLWVVKENENKLPVEFV---NSVGETGLVVRWCNQF-EVLAHQ 339 (459)
Q Consensus 269 ~~~V~vs~Gs~~~~~~~~~~~i~~a~~~-----~~~~~v~~~~~~~~~~~~~~~---~~~~~~v~v~~~~p~~-~lL~~~ 339 (459)
+..+++..|+.... .....++++++. .+.+++++............. ....+++.+.+..... .+++.+
T Consensus 192 ~~~~i~~~G~~~~~--K~~~~li~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~a 269 (365)
T cd03807 192 DTFLIGIVARLHPQ--KDHATLLRAAALLLKKFPNARLLLVGDGPDRANLELLALKELGLEDKVILLGERSDVPALLNAL 269 (365)
T ss_pred CCeEEEEecccchh--cCHHHHHHHHHHHHHhCCCeEEEEecCCcchhHHHHHHHHhcCCCceEEEccccccHHHHHHhC
Confidence 34677788886542 123334444332 244555543322110001111 1234567766655443 788888
Q ss_pred CccceeccCc----hhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcCh
Q 012645 340 AVGCFITHCG----WNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 340 ~~~~~I~HGG----~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
++ +|..+. .+++.||+++|+|+|+... ..+...+... |..++ .-+.+++.+++.++++++
T Consensus 270 di--~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~----~~~~e~~~~~---g~~~~-----~~~~~~l~~~i~~l~~~~ 333 (365)
T cd03807 270 DV--FVLSSLSEGFPNVLLEAMACGLPVVATDV----GDNAELVGDT---GFLVP-----PGDPEALAEAIEALLADP 333 (365)
T ss_pred CE--EEeCCccccCCcHHHHHHhcCCCEEEcCC----CChHHHhhcC---CEEeC-----CCCHHHHHHHHHHHHhCh
Confidence 87 776544 3799999999999988543 3444444444 44444 356899999999999986
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=98.75 E-value=3e-05 Score=76.18 Aligned_cols=132 Identities=15% Similarity=0.158 Sum_probs=78.8
Q ss_pred cEEEEEeCCcccCCHHHHHHHHHHHHhC--CCcEEEEEeCCC-CCCchhhhhh---c---CCCceEE-eeecHH---HHh
Q 012645 270 SVIYVSFGSMADIAANQVDEIARGLKAS--EKPFLWVVKENE-NKLPVEFVNS---V---GETGLVV-RWCNQF---EVL 336 (459)
Q Consensus 270 ~~V~vs~Gs~~~~~~~~~~~i~~a~~~~--~~~~v~~~~~~~-~~~~~~~~~~---~---~~~v~v~-~~~p~~---~lL 336 (459)
.++++..|.... ......++++++.+ +..++++.+... ..+.+.+.+. . .+++... +++++. .++
T Consensus 201 ~~~i~~~Grl~~--~Kg~~~li~a~~~l~~~~~l~i~g~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 278 (388)
T TIGR02149 201 RPYILFVGRITR--QKGVPHLLDAVHYIPKDVQVVLCAGAPDTPEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELL 278 (388)
T ss_pred ceEEEEEccccc--ccCHHHHHHHHHHHhhcCcEEEEeCCCCcHHHHHHHHHHHHHhccccCceEEecCCCCHHHHHHHH
Confidence 356677787653 23355566666654 455555544322 1111112111 1 1335544 567754 568
Q ss_pred cccCccceecc----CchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCccc----HHHHHHHHHH
Q 012645 337 AHQAVGCFITH----CGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVT----GEELNKCVNE 408 (459)
Q Consensus 337 ~~~~~~~~I~H----GG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~----~~~l~~~i~~ 408 (459)
+.+++ +|.= |...++.||+++|+|+|+... ......++.. +.|..++.. ..+ .+.+.++|.+
T Consensus 279 ~~aDv--~v~ps~~e~~g~~~lEA~a~G~PvI~s~~----~~~~e~i~~~-~~G~~~~~~---~~~~~~~~~~l~~~i~~ 348 (388)
T TIGR02149 279 SNAEV--FVCPSIYEPLGIVNLEAMACGTPVVASAT----GGIPEVVVDG-ETGFLVPPD---NSDADGFQAELAKAINI 348 (388)
T ss_pred HhCCE--EEeCCccCCCChHHHHHHHcCCCEEEeCC----CCHHHHhhCC-CceEEcCCC---CCcccchHHHHHHHHHH
Confidence 77887 6642 233577999999999998653 3455566666 678777643 221 2899999999
Q ss_pred HhcCh
Q 012645 409 VMDGE 413 (459)
Q Consensus 409 ll~~~ 413 (459)
+++|+
T Consensus 349 l~~~~ 353 (388)
T TIGR02149 349 LLADP 353 (388)
T ss_pred HHhCH
Confidence 99987
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=98.68 E-value=2.5e-05 Score=76.39 Aligned_cols=81 Identities=15% Similarity=0.158 Sum_probs=58.0
Q ss_pred CCCceEEeeecHH-HHhcccCcccee--cc--CchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCC
Q 012645 321 GETGLVVRWCNQF-EVLAHQAVGCFI--TH--CGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAG 395 (459)
Q Consensus 321 ~~~v~v~~~~p~~-~lL~~~~~~~~I--~H--GG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~ 395 (459)
..++.+.++..+. .+++.+++ +| ++ |-..++.||+++|+|+|+.... .+...++.- ..|..++
T Consensus 254 ~~~v~~~g~~~~~~~~~~~adi--~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~----g~~e~i~~~-~~g~~~~----- 321 (374)
T TIGR03088 254 AHLVWLPGERDDVPALMQALDL--FVLPSLAEGISNTILEAMASGLPVIATAVG----GNPELVQHG-VTGALVP----- 321 (374)
T ss_pred cceEEEcCCcCCHHHHHHhcCE--EEeccccccCchHHHHHHHcCCCEEEcCCC----CcHHHhcCC-CceEEeC-----
Confidence 3456666655443 78888888 66 33 4457999999999999986643 344455555 5676665
Q ss_pred cccHHHHHHHHHHHhcCh
Q 012645 396 IVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 396 ~~~~~~l~~~i~~ll~~~ 413 (459)
.-+.+++.++|.++++++
T Consensus 322 ~~d~~~la~~i~~l~~~~ 339 (374)
T TIGR03088 322 PGDAVALARALQPYVSDP 339 (374)
T ss_pred CCCHHHHHHHHHHHHhCH
Confidence 457899999999999986
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.68 E-value=8.7e-06 Score=78.84 Aligned_cols=135 Identities=12% Similarity=0.125 Sum_probs=77.9
Q ss_pred EEEEEeCCcccC-CHHHHHHHHHHHHhCC--CcEEEEEeCCCCCCchhh----hhhcCCCceEEeeecHH---HHhcccC
Q 012645 271 VIYVSFGSMADI-AANQVDEIARGLKASE--KPFLWVVKENENKLPVEF----VNSVGETGLVVRWCNQF---EVLAHQA 340 (459)
Q Consensus 271 ~V~vs~Gs~~~~-~~~~~~~i~~a~~~~~--~~~v~~~~~~~~~~~~~~----~~~~~~~v~v~~~~p~~---~lL~~~~ 340 (459)
.+++..|+.... ..+.+-..+..+...+ .++++...... ...... .....+++.+.+++|+. .+++.++
T Consensus 196 ~~i~~~G~~~~~K~~~~~l~~~~~~~~~~~~~~l~i~G~~~~-~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~d 274 (365)
T cd03809 196 PYFLYVGTIEPRKNLERLLEAFARLPAKGPDPKLVIVGKRGW-LNEELLARLRELGLGDRVRFLGYVSDEELAALYRGAR 274 (365)
T ss_pred CeEEEeCCCccccCHHHHHHHHHHHHHhcCCCCEEEecCCcc-ccHHHHHHHHHcCCCCeEEECCCCChhHHHHHHhhhh
Confidence 566677876532 2333433344443332 45554433221 111111 11246788888999876 5677777
Q ss_pred ccceecc----CchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcChhhH
Q 012645 341 VGCFITH----CGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQ 416 (459)
Q Consensus 341 ~~~~I~H----GG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~ 416 (459)
+ +|.- |..+++.||+++|+|+|+..... ....+.+. |..+. ..+.+++.++|.++++|+
T Consensus 275 ~--~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~~~~~---~~~~~-----~~~~~~~~~~i~~l~~~~--- 337 (365)
T cd03809 275 A--FVFPSLYEGFGLPVLEAMACGTPVIASNISS----LPEVAGDA---ALYFD-----PLDPEALAAAIERLLEDP--- 337 (365)
T ss_pred h--hcccchhccCCCCHHHHhcCCCcEEecCCCC----ccceecCc---eeeeC-----CCCHHHHHHHHHHHhcCH---
Confidence 7 5533 33468999999999999865421 11112223 44444 457899999999999987
Q ss_pred HHHHHHH
Q 012645 417 KIKRNVS 423 (459)
Q Consensus 417 ~~~~~a~ 423 (459)
+.+.+..
T Consensus 338 ~~~~~~~ 344 (365)
T cd03809 338 ALREELR 344 (365)
T ss_pred HHHHHHH
Confidence 5444433
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=98.67 E-value=2.3e-05 Score=78.60 Aligned_cols=183 Identities=14% Similarity=0.114 Sum_probs=97.3
Q ss_pred CCeeeec-ccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHH--hC--
Q 012645 223 WPLVMIG-PLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLK--AS-- 297 (459)
Q Consensus 223 ~~~~~vg-p~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~--~~-- 297 (459)
-++.||| |+..... ..+..++..+-+.-.+++++|-+--||....=...+-.++++.+ ..
T Consensus 381 v~v~yVGHPL~d~i~---------------~~~~~~~~r~~lgl~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~~ 445 (608)
T PRK01021 381 LRTVYLGHPLVETIS---------------SFSPNLSWKEQLHLPSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLAS 445 (608)
T ss_pred CCeEEECCcHHhhcc---------------cCCCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhcc
Confidence 3599999 6655421 01123334444443446679999999976533334444566655 32
Q ss_pred CCcEEEEEeCCCCCCchhhhhhcC-C---CceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccc-cccch
Q 012645 298 EKPFLWVVKENENKLPVEFVNSVG-E---TGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVP-QFSDQ 372 (459)
Q Consensus 298 ~~~~v~~~~~~~~~~~~~~~~~~~-~---~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P-~~~DQ 372 (459)
+.++++.... ....+.+.+... . .+.++.--...++++.+++ .+.-.| ..++|+...|+|||++= ...=-
T Consensus 446 ~l~fvvp~a~--~~~~~~i~~~~~~~~~~~~~ii~~~~~~~~m~aaD~--aLaaSG-TaTLEaAL~g~PmVV~YK~s~Lt 520 (608)
T PRK01021 446 THQLLVSSAN--PKYDHLILEVLQQEGCLHSHIVPSQFRYELMRECDC--ALAKCG-TIVLETALNQTPTIVTCQLRPFD 520 (608)
T ss_pred CeEEEEecCc--hhhHHHHHHHHhhcCCCCeEEecCcchHHHHHhcCe--eeecCC-HHHHHHHHhCCCEEEEEecCHHH
Confidence 3455554332 111122222111 1 1222210012488877777 777666 45689999999998853 22223
Q ss_pred hhHHHHHHH-----------hh--hceEEee--ecCCCcccHHHHHHHHHHHhcChh-hHHHHHHHHHHHHHH
Q 012645 373 PTNAKFVEE-----------VW--EVGVRAK--KNRAGIVTGEELNKCVNEVMDGER-SQKIKRNVSKWREFA 429 (459)
Q Consensus 373 ~~na~rv~~-----------~~--G~G~~~~--~~~~~~~~~~~l~~~i~~ll~~~~-~~~~~~~a~~l~~~~ 429 (459)
..-|+++.+ .. .+-..+- .+ +.|++.|.+++ ++|.|++ .+++++..+++++.+
T Consensus 521 y~Iak~Lvki~i~yIsLpNIIagr~VvPEllqgQ~---~~tpe~La~~l-~lL~d~~~r~~~~~~l~~lr~~L 589 (608)
T PRK01021 521 TFLAKYIFKIILPAYSLPNIILGSTIFPEFIGGKK---DFQPEEVAAAL-DILKTSQSKEKQKDACRDLYQAM 589 (608)
T ss_pred HHHHHHHHhccCCeeehhHHhcCCCcchhhcCCcc---cCCHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHh
Confidence 344555555 10 1111222 22 68999999997 8888762 234555555555544
|
|
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=98.62 E-value=0.00028 Score=73.78 Aligned_cols=80 Identities=15% Similarity=0.143 Sum_probs=51.5
Q ss_pred CCCceEEeee-cH---HHHhcc-cC-ccceec---cCch-hhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEee
Q 012645 321 GETGLVVRWC-NQ---FEVLAH-QA-VGCFIT---HCGW-NSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAK 390 (459)
Q Consensus 321 ~~~v~v~~~~-p~---~~lL~~-~~-~~~~I~---HGG~-gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~ 390 (459)
.++|.+.++. +. .+++.+ ++ .++||. .=|. -++.||+++|+|+|+.-.. ..+..|+.- .-|..++
T Consensus 618 ~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~G----G~~EiV~dg-~tGfLVd 692 (784)
T TIGR02470 618 HGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFG----GPLEIIQDG-VSGFHID 692 (784)
T ss_pred CCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCC----CHHHHhcCC-CcEEEeC
Confidence 4778877764 32 244432 32 123664 2333 4899999999999886543 445555555 5677776
Q ss_pred ecCCCcccHHHHHHHHHHHh
Q 012645 391 KNRAGIVTGEELNKCVNEVM 410 (459)
Q Consensus 391 ~~~~~~~~~~~l~~~i~~ll 410 (459)
..+++.+.++|.+++
T Consensus 693 -----p~D~eaLA~aL~~ll 707 (784)
T TIGR02470 693 -----PYHGEEAAEKIVDFF 707 (784)
T ss_pred -----CCCHHHHHHHHHHHH
Confidence 457888999988876
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.60 E-value=9.7e-05 Score=71.64 Aligned_cols=124 Identities=18% Similarity=0.227 Sum_probs=70.3
Q ss_pred EEEEeCCcccCCHHHHHHHHHHHHhCC--CcEEEEEeCCC-CCCchhhh--hhcCCCceEEeeecHHH---HhcccCccc
Q 012645 272 IYVSFGSMADIAANQVDEIARGLKASE--KPFLWVVKENE-NKLPVEFV--NSVGETGLVVRWCNQFE---VLAHQAVGC 343 (459)
Q Consensus 272 V~vs~Gs~~~~~~~~~~~i~~a~~~~~--~~~v~~~~~~~-~~~~~~~~--~~~~~~v~v~~~~p~~~---lL~~~~~~~ 343 (459)
.++..|+... ...+..+++++.... .+++++..... ..+...+. ....++|.+.+++|+.+ ++..+++
T Consensus 195 ~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~~ad~-- 270 (363)
T cd04955 195 YYLLVGRIVP--ENNIDDLIEAFSKSNSGKKLVIVGNADHNTPYGKLLKEKAAADPRIIFVGPIYDQELLELLRYAAL-- 270 (363)
T ss_pred EEEEEecccc--cCCHHHHHHHHHhhccCceEEEEcCCCCcchHHHHHHHHhCCCCcEEEccccChHHHHHHHHhCCE--
Confidence 3456777653 223445666666644 45554443211 11111121 12457899999998874 5655666
Q ss_pred eeccCc----h-hhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcCh
Q 012645 344 FITHCG----W-NSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 344 ~I~HGG----~-gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
++-+.- . +++.||+++|+|+|+...... ...++.. |...... +. +.+++.++++++
T Consensus 271 ~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~~----~e~~~~~---g~~~~~~-----~~--l~~~i~~l~~~~ 331 (363)
T cd04955 271 FYLHGHSVGGTNPSLLEAMAYGCPVLASDNPFN----REVLGDK---AIYFKVG-----DD--LASLLEELEADP 331 (363)
T ss_pred EEeCCccCCCCChHHHHHHHcCCCEEEecCCcc----ceeecCC---eeEecCc-----hH--HHHHHHHHHhCH
Confidence 555433 3 479999999999998754321 1111222 2223221 12 999999999986
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.60 E-value=2.3e-05 Score=75.21 Aligned_cols=192 Identities=18% Similarity=0.177 Sum_probs=104.5
Q ss_pred CCeeeec-ccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHh-----
Q 012645 223 WPLVMIG-PLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKA----- 296 (459)
Q Consensus 223 ~~~~~vg-p~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~----- 296 (459)
-++.||| |++..... ........+.+ -.+++++|.+--||....=...+-.++++.+.
T Consensus 153 ~~~~~VGHPl~d~~~~---------------~~~~~~~~~~~-l~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~ 216 (373)
T PF02684_consen 153 VPVTYVGHPLLDEVKP---------------EPDRAEAREKL-LDPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQR 216 (373)
T ss_pred CCeEEECCcchhhhcc---------------CCCHHHHHHhc-CCCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 3599999 66655211 11122333333 23466699999999764222223333444332
Q ss_pred CCCcEEEEEeCCCCCCch---hhhhhcCCCceEEeee-cHHHHhcccCccceeccCchhhHHHhhhcCCeeeccc-cccc
Q 012645 297 SEKPFLWVVKENENKLPV---EFVNSVGETGLVVRWC-NQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVP-QFSD 371 (459)
Q Consensus 297 ~~~~~v~~~~~~~~~~~~---~~~~~~~~~v~v~~~~-p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P-~~~D 371 (459)
.+.++++...... ..+ ........++.+.-.. .-.+++..+++ .+.-.| ..++|+...|+|||++= ...=
T Consensus 217 p~l~fvvp~a~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~m~~ad~--al~~SG-TaTLE~Al~g~P~Vv~Yk~~~l 291 (373)
T PF02684_consen 217 PDLQFVVPVAPEV--HEELIEEILAEYPPDVSIVIIEGESYDAMAAADA--ALAASG-TATLEAALLGVPMVVAYKVSPL 291 (373)
T ss_pred CCeEEEEecCCHH--HHHHHHHHHHhhCCCCeEEEcCCchHHHHHhCcc--hhhcCC-HHHHHHHHhCCCEEEEEcCcHH
Confidence 3455565543321 111 1111122333333222 33467877776 555544 56789999999998763 3333
Q ss_pred hhhHHHHHHHhhhc------------eEEeeecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCc
Q 012645 372 QPTNAKFVEEVWEV------------GVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSS 439 (459)
Q Consensus 372 Q~~na~rv~~~~G~------------G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s 439 (459)
-..-|+++.+. .- -..+-. +..|++.|.+++.+++.|. +.++..+...+.+.+....|.++
T Consensus 292 t~~iak~lvk~-~~isL~Niia~~~v~PEliQ---~~~~~~~i~~~~~~ll~~~---~~~~~~~~~~~~~~~~~~~~~~~ 364 (373)
T PF02684_consen 292 TYFIAKRLVKV-KYISLPNIIAGREVVPELIQ---EDATPENIAAELLELLENP---EKRKKQKELFREIRQLLGPGASS 364 (373)
T ss_pred HHHHHHHhhcC-CEeechhhhcCCCcchhhhc---ccCCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHhhhhccCC
Confidence 44455555443 21 111122 3799999999999999998 55655566666666554555555
Q ss_pred HHH
Q 012645 440 DKN 442 (459)
Q Consensus 440 ~~~ 442 (459)
..+
T Consensus 365 ~~~ 367 (373)
T PF02684_consen 365 RAA 367 (373)
T ss_pred HHH
Confidence 443
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=0.00011 Score=72.68 Aligned_cols=82 Identities=15% Similarity=0.201 Sum_probs=60.2
Q ss_pred cCCCceEEeeecHH---HHhcccCccceecc---------Cch-hhHHHhhhcCCeeeccccccchhhHHHHHHHhhhce
Q 012645 320 VGETGLVVRWCNQF---EVLAHQAVGCFITH---------CGW-NSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVG 386 (459)
Q Consensus 320 ~~~~v~v~~~~p~~---~lL~~~~~~~~I~H---------GG~-gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G 386 (459)
..++|.+.+|+|+. ++++.+++ +|.- -|. .++.||+++|+|+|+.... .....++.- ..|
T Consensus 277 l~~~V~~~G~~~~~el~~~l~~aDv--~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~----g~~E~v~~~-~~G 349 (406)
T PRK15427 277 LEDVVEMPGFKPSHEVKAMLDDADV--FLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHS----GIPELVEAD-KSG 349 (406)
T ss_pred CCCeEEEeCCCCHHHHHHHHHhCCE--EEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCC----CchhhhcCC-Cce
Confidence 35789999999976 46777777 6642 345 5789999999999987543 233344444 567
Q ss_pred EEeeecCCCcccHHHHHHHHHHHhc-Ch
Q 012645 387 VRAKKNRAGIVTGEELNKCVNEVMD-GE 413 (459)
Q Consensus 387 ~~~~~~~~~~~~~~~l~~~i~~ll~-~~ 413 (459)
..++ .-+++.+.++|.++++ |+
T Consensus 350 ~lv~-----~~d~~~la~ai~~l~~~d~ 372 (406)
T PRK15427 350 WLVP-----ENDAQALAQRLAAFSQLDT 372 (406)
T ss_pred EEeC-----CCCHHHHHHHHHHHHhCCH
Confidence 6665 4679999999999999 86
|
|
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=98.54 E-value=2.5e-05 Score=77.14 Aligned_cols=90 Identities=14% Similarity=0.175 Sum_probs=61.8
Q ss_pred CCCceEEeeecHH-HHhcccCcccee--cc--Cchh-hHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCC
Q 012645 321 GETGLVVRWCNQF-EVLAHQAVGCFI--TH--CGWN-SILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRA 394 (459)
Q Consensus 321 ~~~v~v~~~~p~~-~lL~~~~~~~~I--~H--GG~g-s~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~ 394 (459)
.++|.+.+++++. .+++.+++ +| ++ .|.+ .+.||+++|+|+|+.+...+.. .+.. |.|..+.
T Consensus 279 ~~~V~~~G~v~~~~~~~~~adv--~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~~i-----~~~~-~~g~lv~---- 346 (397)
T TIGR03087 279 LPGVTVTGSVADVRPYLAHAAV--AVAPLRIARGIQNKVLEAMAMAKPVVASPEAAEGI-----DALP-GAELLVA---- 346 (397)
T ss_pred CCCeEEeeecCCHHHHHHhCCE--EEecccccCCcccHHHHHHHcCCCEEecCcccccc-----cccC-CcceEeC----
Confidence 4678889999865 78888888 65 32 4553 6999999999999988543321 1234 5565443
Q ss_pred CcccHHHHHHHHHHHhcChh-hHHHHHHHHH
Q 012645 395 GIVTGEELNKCVNEVMDGER-SQKIKRNVSK 424 (459)
Q Consensus 395 ~~~~~~~l~~~i~~ll~~~~-~~~~~~~a~~ 424 (459)
-+++++.++|.++++|++ .+.+.+++++
T Consensus 347 --~~~~~la~ai~~ll~~~~~~~~~~~~ar~ 375 (397)
T TIGR03087 347 --ADPADFAAAILALLANPAEREELGQAARR 375 (397)
T ss_pred --CCHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 368999999999999873 1234444443
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=98.54 E-value=0.00045 Score=72.08 Aligned_cols=97 Identities=22% Similarity=0.286 Sum_probs=65.1
Q ss_pred cCCCceEEeeecHH-HHhcccCccceec---cCch-hhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCC
Q 012645 320 VGETGLVVRWCNQF-EVLAHQAVGCFIT---HCGW-NSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRA 394 (459)
Q Consensus 320 ~~~~v~v~~~~p~~-~lL~~~~~~~~I~---HGG~-gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~ 394 (459)
..++|++.+|.++. .+++.+++ +|. +.|+ +++.||+++|+|+|+.... .....++.- ..|..++..
T Consensus 572 L~~~V~flG~~~dv~~ll~aaDv--~VlpS~~Egfp~vlLEAMA~G~PVVat~~g----G~~EiV~dg-~~GlLv~~~-- 642 (694)
T PRK15179 572 MGERILFTGLSRRVGYWLTQFNA--FLLLSRFEGLPNVLIEAQFSGVPVVTTLAG----GAGEAVQEG-VTGLTLPAD-- 642 (694)
T ss_pred CCCcEEEcCCcchHHHHHHhcCE--EEeccccccchHHHHHHHHcCCeEEEECCC----ChHHHccCC-CCEEEeCCC--
Confidence 35788888988765 78888888 664 5564 6899999999999987642 344445555 568777765
Q ss_pred CcccHHHHHHHHHHHhcChhh-HHHHHHHHHHH
Q 012645 395 GIVTGEELNKCVNEVMDGERS-QKIKRNVSKWR 426 (459)
Q Consensus 395 ~~~~~~~l~~~i~~ll~~~~~-~~~~~~a~~l~ 426 (459)
..+++++.+++.+++.+... ..+++++++..
T Consensus 643 -d~~~~~La~aL~~ll~~l~~~~~l~~~ar~~a 674 (694)
T PRK15179 643 -TVTAPDVAEALARIHDMCAADPGIARKAADWA 674 (694)
T ss_pred -CCChHHHHHHHHHHHhChhccHHHHHHHHHHH
Confidence 56666777777666543210 16666655443
|
|
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=98.52 E-value=0.00011 Score=71.83 Aligned_cols=121 Identities=7% Similarity=-0.078 Sum_probs=68.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCC-eEEEEecCccc---cccCCCCceEEEcCCCCCCCCCCCCCCHHHHHHHHH
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRV-KATLATTHYTV---KSIHATTVGVEPISDGFDEGGFKQAPSVKAYLESFK 83 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh-~V~~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (459)
=|+.+++.|-.|.-..+..++..|+++|| +|++++.+... +.....|++.+.++. ... . .........+..+.
T Consensus 5 ~~~~~~~~~~~g~~~r~~~~~~~l~~~~~~~v~vi~~~~~~~~~~~~~~~~v~v~r~~~-~~~-~-~~~~~~~~~~~~~~ 81 (371)
T PLN02275 5 GRAAVVVLGDFGRSPRMQYHALSLARQASFQVDVVAYGGSEPIPALLNHPSIHIHLMVQ-PRL-L-QRLPRVLYALALLL 81 (371)
T ss_pred cEEEEEEecCCCCCHHHHHHHHHHHhcCCceEEEEEecCCCCCHHHhcCCcEEEEECCC-ccc-c-cccccchHHHHHHH
Confidence 46666777899999999999999999886 79999875432 223335788888864 111 1 11111222111221
Q ss_pred HhchHHHHHHHHHhhcCCCCccEEEeCC-Cch----hHHHHHHHcCCceEEEcc
Q 012645 84 TVGSRTLAEVILKYKDSESPVNCIVYDS-LLT----WALDVARQFGIYGAAMMT 132 (459)
Q Consensus 84 ~~~~~~~~~l~~~~~~~~~~~Dlvi~D~-~~~----~~~~~a~~lgiP~v~~~~ 132 (459)
.. ...+..++..+.....+||+|++.. ... .+..+++..++|++...+
T Consensus 82 ~~-~~~~~~~~~~~~~~~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h 134 (371)
T PLN02275 82 KV-AIQFLMLLWFLCVKIPRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWH 134 (371)
T ss_pred HH-HHHHHHHHHHHHhhCCCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcC
Confidence 11 1111222221111123899998753 221 244566778999988654
|
|
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=98.50 E-value=1.7e-06 Score=83.00 Aligned_cols=305 Identities=14% Similarity=0.105 Sum_probs=144.8
Q ss_pred HHHHhC-CCeEEEEecCcccc--ccCC--CCceEEEcCCCCCCCCCCCCCCHHHHHHHHHHhchHHHHHHHHHhhcCCCC
Q 012645 29 KRLASK-RVKATLATTHYTVK--SIHA--TTVGVEPISDGFDEGGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESP 103 (459)
Q Consensus 29 ~~L~~~-Gh~V~~~~~~~~~~--~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 103 (459)
|+|.++ +.++.++.+...-+ .-.. .|+....++-.+.. .. .+..... ......+.+++++. +
T Consensus 1 ~~l~~~~~~~~~li~tG~H~~~~~g~~~~~~f~i~~~~~~l~~---~~-~~~~~~~----~~~~~~~~~~~~~~-----~ 67 (346)
T PF02350_consen 1 KALQKDPGFELILIVTGQHLDPEMGDTFFEGFGIPKPDYLLDS---DS-QSMAKST----GLAIIELADVLERE-----K 67 (346)
T ss_dssp -HHHCSTTEEEEEEEECSS--CHHHHHHHHHTT--SEEEE--S---TT-S-HHHHH----HHHHHHHHHHHHHH-----T
T ss_pred ChhhhCCCCCEEEEEeCCCCCHHHHHHHHhhCCCCCCCccccc---cc-chHHHHH----HHHHHHHHHHHHhc-----C
Confidence 567776 88888888876622 1111 14443111111111 11 2222222 22234556666665 8
Q ss_pred ccEEE--eCCCc-hhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCcccCCCCCCCCCCCCCccccCC
Q 012645 104 VNCIV--YDSLL-TWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPGLPSLASSDLPSFLAQP 180 (459)
Q Consensus 104 ~Dlvi--~D~~~-~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 180 (459)
||+|| .|.+. .+++.+|..++||++-+.... ...+.. .
T Consensus 68 Pd~Vlv~GD~~~~la~alaA~~~~ipv~HieaGl----------------------------------Rs~d~~-----~ 108 (346)
T PF02350_consen 68 PDAVLVLGDRNEALAAALAAFYLNIPVAHIEAGL----------------------------------RSGDRT-----E 108 (346)
T ss_dssp -SEEEEETTSHHHHHHHHHHHHTT-EEEEES---------------------------------------S-TT-----S
T ss_pred CCEEEEEcCCchHHHHHHHHHHhCCCEEEecCCC----------------------------------CccccC-----C
Confidence 99997 45554 457889999999988875432 000000 0
Q ss_pred CCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcCCCeeeecccCCCccccccccCCccCCCCCCCCChhhh-
Q 012645 181 ASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQC- 259 (459)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l- 259 (459)
...++..+.... .-++..++.+-...+.....-. +-.+++.+|...-+....... ...+..
T Consensus 109 ---g~~de~~R~~i~--~la~lhf~~t~~~~~~L~~~G~-~~~rI~~vG~~~~D~l~~~~~------------~~~~~~~ 170 (346)
T PF02350_consen 109 ---GMPDEINRHAID--KLAHLHFAPTEEARERLLQEGE-PPERIFVVGNPGIDALLQNKE------------EIEEKYK 170 (346)
T ss_dssp ---STTHHHHHHHHH--HH-SEEEESSHHHHHHHHHTT---GGGEEE---HHHHHHHHHHH------------TTCC-HH
T ss_pred ---CCchhhhhhhhh--hhhhhhccCCHHHHHHHHhcCC-CCCeEEEEChHHHHHHHHhHH------------HHhhhhh
Confidence 011222233222 1245666666654443211111 113588888543331111000 001111
Q ss_pred -hhhhccCCCCcEEEEEeCCcccCC-H---HHHHHHHHHHHhC-CCcEEEEEeCCC---CCCchhhhhhcCCCceEEeee
Q 012645 260 -MRWLATKPEKSVIYVSFGSMADIA-A---NQVDEIARGLKAS-EKPFLWVVKENE---NKLPVEFVNSVGETGLVVRWC 330 (459)
Q Consensus 260 -~~~l~~~~~~~~V~vs~Gs~~~~~-~---~~~~~i~~a~~~~-~~~~v~~~~~~~---~~~~~~~~~~~~~~v~v~~~~ 330 (459)
..++.. .+++.+++++=...+.. + ..+..+++++.+. ++.+||.....+ ..+.+.+ ... +|+++++.+
T Consensus 171 ~~~i~~~-~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~p~~~~~i~~~l-~~~-~~v~~~~~l 247 (346)
T PF02350_consen 171 NSGILQD-APKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHNNPRGSDIIIEKL-KKY-DNVRLIEPL 247 (346)
T ss_dssp HHHHHHC-TTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-HHHHHHHHHHH-TT--TTEEEE---
T ss_pred hHHHHhc-cCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCCchHHHHHHHHh-ccc-CCEEEECCC
Confidence 122222 56679999985555544 3 3344455555554 677888876432 1121111 223 588888666
Q ss_pred c---HHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHH
Q 012645 331 N---QFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVN 407 (459)
Q Consensus 331 p---~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~ 407 (459)
+ +..+|+++++ +|+-.| |-.-||.+.|||.|.+ .++..|-+-+ ..|..+- - ..+++.|.++++
T Consensus 248 ~~~~~l~ll~~a~~--vvgdSs-GI~eEa~~lg~P~v~i------R~~geRqe~r-~~~~nvl-v---~~~~~~I~~ai~ 313 (346)
T PF02350_consen 248 GYEEYLSLLKNADL--VVGDSS-GIQEEAPSLGKPVVNI------RDSGERQEGR-ERGSNVL-V---GTDPEAIIQAIE 313 (346)
T ss_dssp -HHHHHHHHHHESE--EEESSH-HHHHHGGGGT--EEEC------SSS-S-HHHH-HTTSEEE-E---TSSHHHHHHHHH
T ss_pred CHHHHHHHHhcceE--EEEcCc-cHHHHHHHhCCeEEEe------cCCCCCHHHH-hhcceEE-e---CCCHHHHHHHHH
Confidence 5 4578888888 999999 4444999999999999 2222333333 3333333 2 689999999999
Q ss_pred HHhcChhhHHHHHHHH
Q 012645 408 EVMDGERSQKIKRNVS 423 (459)
Q Consensus 408 ~ll~~~~~~~~~~~a~ 423 (459)
+++++. .+.++..
T Consensus 314 ~~l~~~---~~~~~~~ 326 (346)
T PF02350_consen 314 KALSDK---DFYRKLK 326 (346)
T ss_dssp HHHH-H---HHHHHHH
T ss_pred HHHhCh---HHHHhhc
Confidence 999875 4444443
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.49 E-value=0.00014 Score=73.35 Aligned_cols=134 Identities=11% Similarity=0.109 Sum_probs=73.3
Q ss_pred CcEEEEEeCCccc-CCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhh---hhcCCCceEE-eeecHH--HHhcccCc
Q 012645 269 KSVIYVSFGSMAD-IAANQVDEIARGLKASEKPFLWVVKENENKLPVEFV---NSVGETGLVV-RWCNQF--EVLAHQAV 341 (459)
Q Consensus 269 ~~~V~vs~Gs~~~-~~~~~~~~i~~a~~~~~~~~v~~~~~~~~~~~~~~~---~~~~~~v~v~-~~~p~~--~lL~~~~~ 341 (459)
+.++++..|.... -..+.+...+..+...+.+++++..+. ....+.+. +..+.++.+. ++-... .+++.+++
T Consensus 281 ~~~~i~~vGRl~~~KG~~~li~a~~~l~~~~~~lvivG~g~-~~~~~~l~~l~~~~~~~v~~~~g~~~~~~~~~~~~aDv 359 (466)
T PRK00654 281 DAPLFAMVSRLTEQKGLDLVLEALPELLEQGGQLVLLGTGD-PELEEAFRALAARYPGKVGVQIGYDEALAHRIYAGADM 359 (466)
T ss_pred CCcEEEEeeccccccChHHHHHHHHHHHhcCCEEEEEecCc-HHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHHHhhCCE
Confidence 3467777788653 222333222222323366666664321 11111221 2345565543 553222 56777777
Q ss_pred cceec---cCchh-hHHHhhhcCCeeecccccc--chhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhc
Q 012645 342 GCFIT---HCGWN-SILEGLSLGVAVVAVPQFS--DQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMD 411 (459)
Q Consensus 342 ~~~I~---HGG~g-s~~eal~~GvP~li~P~~~--DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~ 411 (459)
+|. +-|.| +.+||+++|+|.|+....+ |.-.+...-... +.|..++ .-+++.|.++|.++++
T Consensus 360 --~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~-~~G~lv~-----~~d~~~la~~i~~~l~ 427 (466)
T PRK00654 360 --FLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGE-ATGFVFD-----DFNAEDLLRALRRALE 427 (466)
T ss_pred --EEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCC-CceEEeC-----CCCHHHHHHHHHHHHH
Confidence 774 34554 7889999999998875432 322111111334 5576665 4678999999999886
|
|
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.47 E-value=2.3e-05 Score=73.86 Aligned_cols=334 Identities=13% Similarity=0.126 Sum_probs=178.1
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCC-CeEEEEecCccc--cccCCCCceEEEcC-CCCCCCCCCCCCCHHHHHH
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKR-VKATLATTHYTV--KSIHATTVGVEPIS-DGFDEGGFKQAPSVKAYLE 80 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~G-h~V~~~~~~~~~--~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~ 80 (459)
|+++||+++ +|++=.+.-+.++.+++.+.+ .+..++.+..+. +.... .++...++ ..+.-......+++.....
T Consensus 1 m~~~Kv~~I-~GTRPE~iKmapli~~~~~~~~~~~~vi~TGQH~d~em~~~-~le~~~i~~pdy~L~i~~~~~tl~~~t~ 78 (383)
T COG0381 1 MKMLKVLTI-FGTRPEAIKMAPLVKALEKDPDFELIVIHTGQHRDYEMLDQ-VLELFGIRKPDYDLNIMKPGQTLGEITG 78 (383)
T ss_pred CCceEEEEE-EecCHHHHHHhHHHHHHHhCCCCceEEEEecccccHHHHHH-HHHHhCCCCCCcchhccccCCCHHHHHH
Confidence 445666655 599999999999999999987 787777777766 33222 11111121 1112111122233333322
Q ss_pred HHHHhchHHHHHHHHHhhcCCCCccEEEe--CCCc-hhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCC
Q 012645 81 SFKTVGSRTLAEVILKYKDSESPVNCIVY--DSLL-TWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQET 157 (459)
Q Consensus 81 ~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~--D~~~-~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 157 (459)
.+-..+.+++++. +||+|++ |... ++++.+|.+++||+.-+-...
T Consensus 79 ----~~i~~~~~vl~~~-----kPD~VlVhGDT~t~lA~alaa~~~~IpV~HvEAGl----------------------- 126 (383)
T COG0381 79 ----NIIEGLSKVLEEE-----KPDLVLVHGDTNTTLAGALAAFYLKIPVGHVEAGL----------------------- 126 (383)
T ss_pred ----HHHHHHHHHHHhh-----CCCEEEEeCCcchHHHHHHHHHHhCCceEEEeccc-----------------------
Confidence 2234455666665 8999984 4444 445888889999999875432
Q ss_pred CcccCCCCCCCCCC-CCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcCCCeeeecccCCCcc
Q 012645 158 VPLTLPGLPSLASS-DLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAY 236 (459)
Q Consensus 158 ~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vgp~~~~~~ 236 (459)
.... +.|+-.+ +.+... -++..+.++-...+....+-.+. .+++.+|-...+..
T Consensus 127 ----------Rt~~~~~PEE~N---------R~l~~~-----~S~~hfapte~ar~nLl~EG~~~-~~IfvtGnt~iDal 181 (383)
T COG0381 127 ----------RTGDLYFPEEIN---------RRLTSH-----LSDLHFAPTEIARKNLLREGVPE-KRIFVTGNTVIDAL 181 (383)
T ss_pred ----------ccCCCCCcHHHH---------HHHHHH-----hhhhhcCChHHHHHHHHHcCCCc-cceEEeCChHHHHH
Confidence 0000 0111111 111111 12222333332222111101110 13666775433321
Q ss_pred ccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHh----CCCcEEEEEeCCC-CC
Q 012645 237 LDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKA----SEKPFLWVVKENE-NK 311 (459)
Q Consensus 237 ~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~----~~~~~v~~~~~~~-~~ 311 (459)
..-... ...........+.. +.+..+.+|+=-..+.. +.+..|.+++.+ . ..+.++.+... ..
T Consensus 182 ~~~~~~---------~~~~~~~~~~~~~~-~~~~~iLvT~HRreN~~-~~~~~i~~al~~i~~~~-~~~~viyp~H~~~~ 249 (383)
T COG0381 182 LNTRDR---------VLEDSKILAKGLDD-KDKKYILVTAHRRENVG-EPLEEICEALREIAEEY-PDVIVIYPVHPRPR 249 (383)
T ss_pred HHHHhh---------hccchhhHHhhhcc-ccCcEEEEEcchhhccc-ccHHHHHHHHHHHHHhC-CCceEEEeCCCChh
Confidence 100000 00011111111222 23458888876655544 555555555443 3 24444444332 11
Q ss_pred CchhhhhhcC--CCceEE---eeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhce
Q 012645 312 LPVEFVNSVG--ETGLVV---RWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVG 386 (459)
Q Consensus 312 ~~~~~~~~~~--~~v~v~---~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G 386 (459)
+.+-....+. .|+++. ++.++..+++++.+ ++|-.| |-.-||-..|+|.+++=..-|||. .. -.|
T Consensus 250 v~e~~~~~L~~~~~v~li~pl~~~~f~~L~~~a~~--iltDSG-giqEEAp~lg~Pvl~lR~~TERPE----~v---~ag 319 (383)
T COG0381 250 VRELVLKRLKNVERVKLIDPLGYLDFHNLMKNAFL--ILTDSG-GIQEEAPSLGKPVLVLRDTTERPE----GV---EAG 319 (383)
T ss_pred hhHHHHHHhCCCCcEEEeCCcchHHHHHHHHhceE--EEecCC-chhhhHHhcCCcEEeeccCCCCcc----ce---ecC
Confidence 1111112233 357776 67788899988888 999876 456799999999999999999987 12 233
Q ss_pred EEeeecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHH
Q 012645 387 VRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWR 426 (459)
Q Consensus 387 ~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~ 426 (459)
...-- ..+.+.|.+++.++++++ ++.+|.+...
T Consensus 320 t~~lv----g~~~~~i~~~~~~ll~~~---~~~~~m~~~~ 352 (383)
T COG0381 320 TNILV----GTDEENILDAATELLEDE---EFYERMSNAK 352 (383)
T ss_pred ceEEe----CccHHHHHHHHHHHhhCh---HHHHHHhccc
Confidence 33332 467899999999999997 6666544433
|
|
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.46 E-value=8.1e-06 Score=79.13 Aligned_cols=127 Identities=15% Similarity=0.124 Sum_probs=85.5
Q ss_pred EEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhcCCCceEEeeecHH---HHhcccCccceeccC
Q 012645 272 IYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENENKLPVEFVNSVGETGLVVRWCNQF---EVLAHQAVGCFITHC 348 (459)
Q Consensus 272 V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~v~~~~p~~---~lL~~~~~~~~I~HG 348 (459)
.++..|+... ......++++++..+.+++++..+. ..+.+.+...+||.+.+++|+. .+++.+++-++-+.-
T Consensus 197 ~il~~G~~~~--~K~~~~li~a~~~~~~~l~ivG~g~---~~~~l~~~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~e 271 (351)
T cd03804 197 YYLSVGRLVP--YKRIDLAIEAFNKLGKRLVVIGDGP---ELDRLRAKAGPNVTFLGRVSDEELRDLYARARAFLFPAEE 271 (351)
T ss_pred EEEEEEcCcc--ccChHHHHHHHHHCCCcEEEEECCh---hHHHHHhhcCCCEEEecCCCHHHHHHHHHhCCEEEECCcC
Confidence 4556677653 2346667888888777766655432 2223333467899999999985 578788873322344
Q ss_pred ch-hhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcCh
Q 012645 349 GW-NSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 349 G~-gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
|. .++.||+++|+|+|.....+ ....++.. +.|..++ .-+++.+.++|.++++|+
T Consensus 272 ~~g~~~~Eama~G~Pvi~~~~~~----~~e~i~~~-~~G~~~~-----~~~~~~la~~i~~l~~~~ 327 (351)
T cd03804 272 DFGIVPVEAMASGTPVIAYGKGG----ALETVIDG-VTGILFE-----EQTVESLAAAVERFEKNE 327 (351)
T ss_pred CCCchHHHHHHcCCCEEEeCCCC----CcceeeCC-CCEEEeC-----CCCHHHHHHHHHHHHhCc
Confidence 44 35789999999999976432 33345555 6677776 457888999999999986
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=98.44 E-value=8.5e-05 Score=77.65 Aligned_cols=81 Identities=12% Similarity=0.190 Sum_probs=50.1
Q ss_pred CCCceEEe----eecHHHHhc----ccCccceecc---Cchh-hHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEE
Q 012645 321 GETGLVVR----WCNQFEVLA----HQAVGCFITH---CGWN-SILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVR 388 (459)
Q Consensus 321 ~~~v~v~~----~~p~~~lL~----~~~~~~~I~H---GG~g-s~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~ 388 (459)
.++|.+.+ ..+..++.. ..++ ||.- -|.| ++.||+++|+|+|+... ......++.- .-|..
T Consensus 641 ~~~V~flG~~~~~~~~~eLyr~iadaaDV--fVlPS~~EgFGLvvLEAMA~GlPVVATdv----GG~~EIV~dG-~tG~L 713 (815)
T PLN00142 641 KGQFRWIAAQTNRVRNGELYRYIADTKGA--FVQPALYEAFGLTVVEAMTCGLPTFATCQ----GGPAEIIVDG-VSGFH 713 (815)
T ss_pred CCcEEEcCCcCCcccHHHHHHHHHhhCCE--EEeCCcccCCCHHHHHHHHcCCCEEEcCC----CCHHHHhcCC-CcEEE
Confidence 46666654 333344543 2344 6643 5554 89999999999988654 3344445544 45777
Q ss_pred eeecCCCcccHHHHHHHHHHH----hcCh
Q 012645 389 AKKNRAGIVTGEELNKCVNEV----MDGE 413 (459)
Q Consensus 389 ~~~~~~~~~~~~~l~~~i~~l----l~~~ 413 (459)
++. -+++.+.++|.++ ++|+
T Consensus 714 V~P-----~D~eaLA~aI~~lLekLl~Dp 737 (815)
T PLN00142 714 IDP-----YHGDEAANKIADFFEKCKEDP 737 (815)
T ss_pred eCC-----CCHHHHHHHHHHHHHHhcCCH
Confidence 663 4677777777654 4676
|
|
| >KOG3349 consensus Predicted glycosyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.42 E-value=9.3e-07 Score=70.69 Aligned_cols=120 Identities=16% Similarity=0.096 Sum_probs=80.6
Q ss_pred cEEEEEeCCcccC---CHHHHHHHHHHHHhCCC-cEEEEEeCCCCCCchhhhh-hcCCC--ceEEeeecH-HHHhcccCc
Q 012645 270 SVIYVSFGSMADI---AANQVDEIARGLKASEK-PFLWVVKENENKLPVEFVN-SVGET--GLVVRWCNQ-FEVLAHQAV 341 (459)
Q Consensus 270 ~~V~vs~Gs~~~~---~~~~~~~i~~a~~~~~~-~~v~~~~~~~~~~~~~~~~-~~~~~--v~v~~~~p~-~~lL~~~~~ 341 (459)
..+||+-||.... ....-...++.+.+.|. +.++..+.+....++.... +--+. +...+|-|- .+..+.+++
T Consensus 4 ~~vFVTVGtT~Fd~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg~~~~~d~~~~~~k~~gl~id~y~f~psl~e~I~~Adl 83 (170)
T KOG3349|consen 4 MTVFVTVGTTSFDDLISCVLSEEFLQELQKRGFTKLIIQIGRGQPFFGDPIDLIRKNGGLTIDGYDFSPSLTEDIRSADL 83 (170)
T ss_pred eEEEEEeccccHHHHHHHHcCHHHHHHHHHcCccEEEEEecCCccCCCCHHHhhcccCCeEEEEEecCccHHHHHhhccE
Confidence 3899999998631 12223345667777776 4667777653111111110 00122 223477786 477777888
Q ss_pred cceeccCchhhHHHhhhcCCeeecccc----ccchhhHHHHHHHhhhceEEeeec
Q 012645 342 GCFITHCGWNSILEGLSLGVAVVAVPQ----FSDQPTNAKFVEEVWEVGVRAKKN 392 (459)
Q Consensus 342 ~~~I~HGG~gs~~eal~~GvP~li~P~----~~DQ~~na~rv~~~~G~G~~~~~~ 392 (459)
+|.|+|.||++|.|..|+|.|+++- .-.|..-|..++++ |-=......
T Consensus 84 --VIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~~e-gyL~~C~ps 135 (170)
T KOG3349|consen 84 --VISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLAEE-GYLYYCTPS 135 (170)
T ss_pred --EEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHHhc-CcEEEeecc
Confidence 9999999999999999999999993 45799999999999 765555543
|
|
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.34 E-value=0.00087 Score=63.96 Aligned_cols=316 Identities=14% Similarity=0.161 Sum_probs=176.8
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEe-cCccccccCC---CCceEEEcCCCCCCCCCCCCCCHHHHHHHHH
Q 012645 10 VLVLTYPAQGHINPLLQFAKRLASK--RVKATLAT-THYTVKSIHA---TTVGVEPISDGFDEGGFKQAPSVKAYLESFK 83 (459)
Q Consensus 10 il~~~~~~~GH~~p~~~la~~L~~~--Gh~V~~~~-~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (459)
.+-+=.-|.|-++-.++|.++|+++ +..|++-+ ++...+.+++ ..+....+|-+.
T Consensus 51 ~vWiHaaSVGEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~~~~v~h~YlP~D~------------------- 111 (419)
T COG1519 51 LVWIHAASVGEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALFGDSVIHQYLPLDL------------------- 111 (419)
T ss_pred eEEEEecchhHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHcCCCeEEEecCcCc-------------------
Confidence 3444456899999999999999998 88888887 5555555444 123333343111
Q ss_pred HhchHHHHHHHHHhhcCCCCccEEEeCCCchh--HHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCccc
Q 012645 84 TVGSRTLAEVILKYKDSESPVNCIVYDSLLTW--ALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLT 161 (459)
Q Consensus 84 ~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~--~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 161 (459)
...+...++.+ +||++|.-....| ...-+++.|+|.+.+..--
T Consensus 112 ---~~~v~rFl~~~-----~P~l~Ii~EtElWPnli~e~~~~~~p~~LvNaRL--------------------------- 156 (419)
T COG1519 112 ---PIAVRRFLRKW-----RPKLLIIMETELWPNLINELKRRGIPLVLVNARL--------------------------- 156 (419)
T ss_pred ---hHHHHHHHHhc-----CCCEEEEEeccccHHHHHHHHHcCCCEEEEeeee---------------------------
Confidence 12334555666 8999886555555 4556778999999974311
Q ss_pred CCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcCCCeeeecccCCCccccccc
Q 012645 162 LPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAYLDQQI 241 (459)
Q Consensus 162 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vgp~~~~~~~~~~~ 241 (459)
..+. ...+.......+..+ .+-+.++..+-.+-+. ...+- ..++..+|.+=...
T Consensus 157 -------S~rS-------~~~y~k~~~~~~~~~---~~i~li~aQse~D~~R--f~~LG-a~~v~v~GNlKfd~------ 210 (419)
T COG1519 157 -------SDRS-------FARYAKLKFLARLLF---KNIDLILAQSEEDAQR--FRSLG-AKPVVVTGNLKFDI------ 210 (419)
T ss_pred -------chhh-------hHHHHHHHHHHHHHH---HhcceeeecCHHHHHH--HHhcC-CcceEEecceeecC------
Confidence 0000 011111112222222 2345666665443332 11111 12355566432221
Q ss_pred cCCccCCCCCCCCChh---hhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhC--CCcEEEEEeCCCCCCch--
Q 012645 242 AGDSAYGANIWEPTGD---QCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKAS--EKPFLWVVKENENKLPV-- 314 (459)
Q Consensus 242 ~~~~~~g~~~~~~~~~---~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~--~~~~v~~~~~~~~~~~~-- 314 (459)
.....+.. .+...+... ..+.|..+|... +.+..-....++.+. +...||+=...+ ..++
T Consensus 211 --------~~~~~~~~~~~~~r~~l~~~---r~v~iaaSTH~G-Eeei~l~~~~~l~~~~~~~llIlVPRHpE-Rf~~v~ 277 (419)
T COG1519 211 --------EPPPQLAAELAALRRQLGGH---RPVWVAASTHEG-EEEIILDAHQALKKQFPNLLLILVPRHPE-RFKAVE 277 (419)
T ss_pred --------CCChhhHHHHHHHHHhcCCC---CceEEEecCCCc-hHHHHHHHHHHHHhhCCCceEEEecCChh-hHHHHH
Confidence 00001111 233333332 367777777543 334444455555553 344455432221 1100
Q ss_pred ------hh----hhh-----cCCCceEEeeecHH-HHhcccCc----cceeccCchhhHHHhhhcCCeeeccccccchhh
Q 012645 315 ------EF----VNS-----VGETGLVVRWCNQF-EVLAHQAV----GCFITHCGWNSILEGLSLGVAVVAVPQFSDQPT 374 (459)
Q Consensus 315 ------~~----~~~-----~~~~v~v~~~~p~~-~lL~~~~~----~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~ 374 (459)
++ .++ ...+|.+.|-+=-+ .+++-+++ +.++-+||+| ..|+++.|+|+|.=|...-|.+
T Consensus 278 ~l~~~~gl~~~~rS~~~~~~~~tdV~l~DtmGEL~l~y~~adiAFVGGSlv~~GGHN-~LEpa~~~~pvi~Gp~~~Nf~e 356 (419)
T COG1519 278 NLLKRKGLSVTRRSQGDPPFSDTDVLLGDTMGELGLLYGIADIAFVGGSLVPIGGHN-PLEPAAFGTPVIFGPYTFNFSD 356 (419)
T ss_pred HHHHHcCCeEEeecCCCCCCCCCcEEEEecHhHHHHHHhhccEEEECCcccCCCCCC-hhhHHHcCCCEEeCCccccHHH
Confidence 00 011 12367777766433 55555555 4467799998 5799999999999999999999
Q ss_pred HHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcChh-hHHHHHHHHHHHH
Q 012645 375 NAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGER-SQKIKRNVSKWRE 427 (459)
Q Consensus 375 na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~-~~~~~~~a~~l~~ 427 (459)
-++++.+. |.|..++ + .+.|.+++..+++|++ .+.|.+++.++-.
T Consensus 357 i~~~l~~~-ga~~~v~-----~--~~~l~~~v~~l~~~~~~r~~~~~~~~~~v~ 402 (419)
T COG1519 357 IAERLLQA-GAGLQVE-----D--ADLLAKAVELLLADEDKREAYGRAGLEFLA 402 (419)
T ss_pred HHHHHHhc-CCeEEEC-----C--HHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 99999999 9998886 4 7888889988888762 1334444443333
|
|
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=98.30 E-value=0.00092 Score=67.63 Aligned_cols=134 Identities=7% Similarity=0.014 Sum_probs=75.0
Q ss_pred CcEEEEEeCCccc-CCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhh---hhhcCCCceEEeeecHH---HHhcccCc
Q 012645 269 KSVIYVSFGSMAD-IAANQVDEIARGLKASEKPFLWVVKENENKLPVEF---VNSVGETGLVVRWCNQF---EVLAHQAV 341 (459)
Q Consensus 269 ~~~V~vs~Gs~~~-~~~~~~~~i~~a~~~~~~~~v~~~~~~~~~~~~~~---~~~~~~~v~v~~~~p~~---~lL~~~~~ 341 (459)
+.++++..|.... -..+.+...+..+.+.+.+++++..+. ....+.+ ....+.++.+....+.. .+++.+++
T Consensus 290 ~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~-~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~aDv 368 (473)
T TIGR02095 290 DVPLFGVISRLTQQKGVDLLLAALPELLELGGQLVVLGTGD-PELEEALRELAERYPGNVRVIIGYDEALAHLIYAGADF 368 (473)
T ss_pred CCCEEEEEecCccccChHHHHHHHHHHHHcCcEEEEECCCC-HHHHHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHhCCE
Confidence 3466777788754 223333333333333455666554321 1111122 12345667666555544 47777777
Q ss_pred cceecc---Cchh-hHHHhhhcCCeeecccccc--chhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhc
Q 012645 342 GCFITH---CGWN-SILEGLSLGVAVVAVPQFS--DQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMD 411 (459)
Q Consensus 342 ~~~I~H---GG~g-s~~eal~~GvP~li~P~~~--DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~ 411 (459)
+|.- -|.| +.+||+++|+|.|+....+ |.-.+...-... +.|..++ ..+++.+.++|.+++.
T Consensus 369 --~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~-~~G~l~~-----~~d~~~la~~i~~~l~ 436 (473)
T TIGR02095 369 --ILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAES-GTGFLFE-----EYDPGALLAALSRALR 436 (473)
T ss_pred --EEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCC-CceEEeC-----CCCHHHHHHHHHHHHH
Confidence 7743 3444 7889999999999876432 222111000233 4566665 5678999999999887
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=98.26 E-value=0.00036 Score=69.07 Aligned_cols=72 Identities=15% Similarity=0.166 Sum_probs=48.9
Q ss_pred EeeecHHHHhcccCccceecc----CchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHH
Q 012645 327 VRWCNQFEVLAHQAVGCFITH----CGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEEL 402 (459)
Q Consensus 327 ~~~~p~~~lL~~~~~~~~I~H----GG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l 402 (459)
.++.+..+++...++ ||.- |=..+++||+++|+|+|+.-.... ..+..- +-|... -+.+.+
T Consensus 289 ~G~~~~~~~~~~~Dv--Fv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~~-----~~v~~~-~ng~~~-------~~~~~~ 353 (462)
T PLN02846 289 PGRDHADPLFHDYKV--FLNPSTTDVVCTTTAEALAMGKIVVCANHPSN-----EFFKQF-PNCRTY-------DDGKGF 353 (462)
T ss_pred CCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCcEEEecCCCc-----ceeecC-CceEec-------CCHHHH
Confidence 356666679977777 8876 344689999999999998864331 222222 333222 257799
Q ss_pred HHHHHHHhcCh
Q 012645 403 NKCVNEVMDGE 413 (459)
Q Consensus 403 ~~~i~~ll~~~ 413 (459)
.+++.++|+++
T Consensus 354 a~ai~~~l~~~ 364 (462)
T PLN02846 354 VRATLKALAEE 364 (462)
T ss_pred HHHHHHHHccC
Confidence 99999999864
|
|
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.23 E-value=0.0013 Score=66.67 Aligned_cols=135 Identities=7% Similarity=0.002 Sum_probs=74.8
Q ss_pred CcEEEEEeCCccc-CCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhh---hhcCCCceEEeeecHH---HHhcccCc
Q 012645 269 KSVIYVSFGSMAD-IAANQVDEIARGLKASEKPFLWVVKENENKLPVEFV---NSVGETGLVVRWCNQF---EVLAHQAV 341 (459)
Q Consensus 269 ~~~V~vs~Gs~~~-~~~~~~~~i~~a~~~~~~~~v~~~~~~~~~~~~~~~---~~~~~~v~v~~~~p~~---~lL~~~~~ 341 (459)
+.++++..|.... -..+.+...+..+...+.+++++.... ....+.+. ...++|+.+..-.++. .+++.+++
T Consensus 295 ~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aDv 373 (476)
T cd03791 295 DAPLFGFVGRLTEQKGIDLLLEALPELLELGGQLVILGSGD-PEYEEALRELAARYPGRVAVLIGYDEALAHLIYAGADF 373 (476)
T ss_pred CCCEEEEEeeccccccHHHHHHHHHHHHHcCcEEEEEecCC-HHHHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhCCE
Confidence 3466777787763 223333333333433455655554332 11111111 2235677765444443 46777777
Q ss_pred cceecc---Cch-hhHHHhhhcCCeeecccccc--chhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcC
Q 012645 342 GCFITH---CGW-NSILEGLSLGVAVVAVPQFS--DQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDG 412 (459)
Q Consensus 342 ~~~I~H---GG~-gs~~eal~~GvP~li~P~~~--DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~ 412 (459)
++.- -|. .+.+||+++|+|.|+....+ |--.+...-.+. |.|..++ ..+++++.+++.++++.
T Consensus 374 --~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~-~~G~~~~-----~~~~~~l~~~i~~~l~~ 442 (476)
T cd03791 374 --FLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGE-GTGFVFE-----GYNADALLAALRRALAL 442 (476)
T ss_pred --EECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCC-CCeEEeC-----CCCHHHHHHHHHHHHHH
Confidence 7743 223 47789999999999765432 222111111134 5787776 46789999999998863
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=98.23 E-value=0.001 Score=64.95 Aligned_cols=130 Identities=15% Similarity=0.083 Sum_probs=72.5
Q ss_pred cEEEEEeCCccc-CCHHHHHHHHHHHH-h-CCCcEEEEEeCCC-CCCc----hhhh--hhcCCCceEEeee--cHH---H
Q 012645 270 SVIYVSFGSMAD-IAANQVDEIARGLK-A-SEKPFLWVVKENE-NKLP----VEFV--NSVGETGLVVRWC--NQF---E 334 (459)
Q Consensus 270 ~~V~vs~Gs~~~-~~~~~~~~i~~a~~-~-~~~~~v~~~~~~~-~~~~----~~~~--~~~~~~v~v~~~~--p~~---~ 334 (459)
..+++..|.+.. -..+.+-..+..+. . .+.+++++..+.. +... .... ....+++.+.++. ++. .
T Consensus 190 ~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 269 (372)
T cd03792 190 RPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQLVLVGSGATDDPEGWIVYEEVLEYAEGDPDIHVLTLPPVSDLEVNA 269 (372)
T ss_pred CcEEEEEeccccccCcHHHHHHHHHHHhhCCCCEEEEEeCCCCCCchhHHHHHHHHHHhCCCCCeEEEecCCCCHHHHHH
Confidence 367777888754 22233333333232 2 3455555443321 1110 1111 1234678888776 333 5
Q ss_pred HhcccCccceeccC---c-hhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHh
Q 012645 335 VLAHQAVGCFITHC---G-WNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVM 410 (459)
Q Consensus 335 lL~~~~~~~~I~HG---G-~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll 410 (459)
+++.+++ |+.-. | ..++.||+++|+|+|+.... .....+..- ..|...+ +.+.+..+|.+++
T Consensus 270 ~~~~ad~--~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~----~~~~~i~~~-~~g~~~~-------~~~~~a~~i~~ll 335 (372)
T cd03792 270 LQRASTV--VLQKSIREGFGLTVTEALWKGKPVIAGPVG----GIPLQIEDG-ETGFLVD-------TVEEAAVRILYLL 335 (372)
T ss_pred HHHhCeE--EEeCCCccCCCHHHHHHHHcCCCEEEcCCC----CchhhcccC-CceEEeC-------CcHHHHHHHHHHH
Confidence 6777777 77533 3 34999999999999987643 223334444 4565332 3467778999999
Q ss_pred cCh
Q 012645 411 DGE 413 (459)
Q Consensus 411 ~~~ 413 (459)
+++
T Consensus 336 ~~~ 338 (372)
T cd03792 336 RDP 338 (372)
T ss_pred cCH
Confidence 886
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.17 E-value=0.0006 Score=64.34 Aligned_cols=199 Identities=14% Similarity=0.133 Sum_probs=107.9
Q ss_pred Ceeeec-ccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHh-----C
Q 012645 224 PLVMIG-PLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKA-----S 297 (459)
Q Consensus 224 ~~~~vg-p~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~-----~ 297 (459)
+..||| |+....+ ..++.+...+-+....+++++.+-.||....-...+..+.++... .
T Consensus 157 ~~~yVGHpl~d~i~---------------~~~~r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~ 221 (381)
T COG0763 157 PCTYVGHPLADEIP---------------LLPDREAAREKLGIDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYP 221 (381)
T ss_pred CeEEeCChhhhhcc---------------ccccHHHHHHHhCCCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCC
Confidence 488999 5554421 223344455556555567799999999864222222223333332 4
Q ss_pred CCcEEEEEeCCC-CCCchhhhhhcCCCc-eEEeee-c-HH-HHhcccCccceeccCchhhHHHhhhcCCeeecccc-ccc
Q 012645 298 EKPFLWVVKENE-NKLPVEFVNSVGETG-LVVRWC-N-QF-EVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQ-FSD 371 (459)
Q Consensus 298 ~~~~v~~~~~~~-~~~~~~~~~~~~~~v-~v~~~~-p-~~-~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~-~~D 371 (459)
+.++++-+.... ....... ...++ ...-++ + +. .++..+|+ .+.-+|- -++|+..+|+|||+.=- ..=
T Consensus 222 ~~~~vlp~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~a~~~aD~--al~aSGT-~tLE~aL~g~P~Vv~Yk~~~i 295 (381)
T COG0763 222 DLKFVLPLVNAKYRRIIEEA---LKWEVAGLSLILIDGEKRKAFAAADA--ALAASGT-ATLEAALAGTPMVVAYKVKPI 295 (381)
T ss_pred CceEEEecCcHHHHHHHHHH---hhccccCceEEecCchHHHHHHHhhH--HHHhccH-HHHHHHHhCCCEEEEEeccHH
Confidence 466666554321 1111111 11111 122222 2 22 46756666 6666654 56899999999987521 111
Q ss_pred hhhHHHHHHHhhhce-----------EEeeecCCCcccHHHHHHHHHHHhcCh-hhHHHHHHHHHHHHHHHHHHhcCCCc
Q 012645 372 QPTNAKFVEEVWEVG-----------VRAKKNRAGIVTGEELNKCVNEVMDGE-RSQKIKRNVSKWREFAKKAVSAGGSS 439 (459)
Q Consensus 372 Q~~na~rv~~~~G~G-----------~~~~~~~~~~~~~~~l~~~i~~ll~~~-~~~~~~~~a~~l~~~~~~~~~~~g~s 439 (459)
-..-|.+..+.+=++ ..+-. ..++++.|.+++..++.|+ +++.+++...++++.++. ++++
T Consensus 296 t~~iak~lvk~~yisLpNIi~~~~ivPEliq---~~~~pe~la~~l~~ll~~~~~~~~~~~~~~~l~~~l~~----~~~~ 368 (381)
T COG0763 296 TYFIAKRLVKLPYVSLPNILAGREIVPELIQ---EDCTPENLARALEELLLNGDRREALKEKFRELHQYLRE----DPAS 368 (381)
T ss_pred HHHHHHHhccCCcccchHHhcCCccchHHHh---hhcCHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHcC----CcHH
Confidence 223344444431111 11111 2688999999999999987 345677777777777653 3455
Q ss_pred HHHHHHHHHHH
Q 012645 440 DKNIDEFVVRL 450 (459)
Q Consensus 440 ~~~~~~~~~~l 450 (459)
+.+++.+++.+
T Consensus 369 e~aA~~vl~~~ 379 (381)
T COG0763 369 EIAAQAVLELL 379 (381)
T ss_pred HHHHHHHHHHh
Confidence 66666665543
|
|
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=98.15 E-value=0.0034 Score=62.91 Aligned_cols=95 Identities=16% Similarity=0.110 Sum_probs=58.6
Q ss_pred cCCCceEEeeecHH---HHhcccCccceec---cCchh-hHHHhhhcCCeeecccccc---chhhHHHHHHHhhhceEEe
Q 012645 320 VGETGLVVRWCNQF---EVLAHQAVGCFIT---HCGWN-SILEGLSLGVAVVAVPQFS---DQPTNAKFVEEVWEVGVRA 389 (459)
Q Consensus 320 ~~~~v~v~~~~p~~---~lL~~~~~~~~I~---HGG~g-s~~eal~~GvP~li~P~~~---DQ~~na~rv~~~~G~G~~~ 389 (459)
+.++|.+.+++|+. .+|+.+++ +|+ +-|+| ++.||+++|+|+|+....+ |.-.+. ..-..|..
T Consensus 333 L~~~V~f~g~v~~~el~~ll~~a~~--~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~----~~g~tG~l- 405 (463)
T PLN02949 333 LDGDVEFHKNVSYRDLVRLLGGAVA--GLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDE----DGQQTGFL- 405 (463)
T ss_pred CCCcEEEeCCCCHHHHHHHHHhCcE--EEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecC----CCCccccc-
Confidence 35789999999866 46767776 763 34444 7999999999999986432 111100 00011211
Q ss_pred eecCCCcccHHHHHHHHHHHhcC-hh-hHHHHHHHHHHHH
Q 012645 390 KKNRAGIVTGEELNKCVNEVMDG-ER-SQKIKRNVSKWRE 427 (459)
Q Consensus 390 ~~~~~~~~~~~~l~~~i~~ll~~-~~-~~~~~~~a~~l~~ 427 (459)
--+++++.++|.+++++ ++ .+++.+++++-.+
T Consensus 406 ------~~~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~~ 439 (463)
T PLN02949 406 ------ATTVEEYADAILEVLRMRETERLEIAAAARKRAN 439 (463)
T ss_pred ------CCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 12789999999999984 31 2345555554433
|
|
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=98.13 E-value=0.0077 Score=65.05 Aligned_cols=132 Identities=9% Similarity=0.056 Sum_probs=71.7
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHHh---CCCcEEEEEeCCCCCCchhhh---hh----cCCCceEEeeecHH---HHhc
Q 012645 271 VIYVSFGSMADIAANQVDEIARGLKA---SEKPFLWVVKENENKLPVEFV---NS----VGETGLVVRWCNQF---EVLA 337 (459)
Q Consensus 271 ~V~vs~Gs~~~~~~~~~~~i~~a~~~---~~~~~v~~~~~~~~~~~~~~~---~~----~~~~v~v~~~~p~~---~lL~ 337 (459)
++++..|..... ..+..+++|+.. .+.++|++-.+.+..+...+. .+ .+++|.+....+.. .+++
T Consensus 841 plVg~VGRL~~q--KGvdlLi~Al~~ll~~~~qlVIvG~Gpd~~~e~~l~~La~~Lg~~~~~rV~f~g~~de~lah~iya 918 (1036)
T PLN02316 841 PLVGIITRLTHQ--KGIHLIKHAIWRTLERNGQVVLLGSAPDPRIQNDFVNLANQLHSSHHDRARLCLTYDEPLSHLIYA 918 (1036)
T ss_pred eEEEEEeccccc--cCHHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHHHHHHHHHhCccCCCeEEEEecCCHHHHHHHHH
Confidence 566666766531 223334444433 356666543321111111221 11 24567766544543 4786
Q ss_pred ccCccceeccC---c-hhhHHHhhhcCCeeecccccc--chhhH-------HHHHHHhhhceEEeeecCCCcccHHHHHH
Q 012645 338 HQAVGCFITHC---G-WNSILEGLSLGVAVVAVPQFS--DQPTN-------AKFVEEVWEVGVRAKKNRAGIVTGEELNK 404 (459)
Q Consensus 338 ~~~~~~~I~HG---G-~gs~~eal~~GvP~li~P~~~--DQ~~n-------a~rv~~~~G~G~~~~~~~~~~~~~~~l~~ 404 (459)
.+|+ |+.-. | .-+.+||+++|+|.|+....+ |.... +...... +-|...+ ..+++.|..
T Consensus 919 aADi--flmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~-~tGflf~-----~~d~~aLa~ 990 (1036)
T PLN02316 919 GADF--ILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLE-PNGFSFD-----GADAAGVDY 990 (1036)
T ss_pred hCcE--EEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccC-CceEEeC-----CCCHHHHHH
Confidence 7777 88532 3 358899999999888765432 22211 1111112 3465555 578899999
Q ss_pred HHHHHhcC
Q 012645 405 CVNEVMDG 412 (459)
Q Consensus 405 ~i~~ll~~ 412 (459)
+|.++|.+
T Consensus 991 AL~raL~~ 998 (1036)
T PLN02316 991 ALNRAISA 998 (1036)
T ss_pred HHHHHHhh
Confidence 99999975
|
|
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=98.06 E-value=0.00091 Score=67.66 Aligned_cols=150 Identities=13% Similarity=0.131 Sum_probs=87.1
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHHh-----CCCcEEEEEeCCC--CCCchhhhh-hcCCCceEEeeecHHHHhcccCcc
Q 012645 271 VIYVSFGSMADIAANQVDEIARGLKA-----SEKPFLWVVKENE--NKLPVEFVN-SVGETGLVVRWCNQFEVLAHQAVG 342 (459)
Q Consensus 271 ~V~vs~Gs~~~~~~~~~~~i~~a~~~-----~~~~~v~~~~~~~--~~~~~~~~~-~~~~~v~v~~~~p~~~lL~~~~~~ 342 (459)
.++++.|..... ..+..+++|+.. .+.++++ ++.+. ..+.+-..+ ...++|.+.++.+...+++.+++
T Consensus 320 ~~il~vGrl~~~--Kg~~~li~A~~~l~~~~p~~~l~i-~G~G~~~~~l~~~i~~~~l~~~V~f~G~~~~~~~~~~adv- 395 (500)
T TIGR02918 320 FSIITASRLAKE--KHIDWLVKAVVKAKKSVPELTFDI-YGEGGEKQKLQKIINENQAQDYIHLKGHRNLSEVYKDYEL- 395 (500)
T ss_pred eEEEEEeccccc--cCHHHHHHHHHHHHhhCCCeEEEE-EECchhHHHHHHHHHHcCCCCeEEEcCCCCHHHHHHhCCE-
Confidence 566777887532 233444444432 2333333 34321 112111111 13467888898888899988888
Q ss_pred ceec---cCch-hhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCccc----HHHHHHHHHHHhcChh
Q 012645 343 CFIT---HCGW-NSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVT----GEELNKCVNEVMDGER 414 (459)
Q Consensus 343 ~~I~---HGG~-gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~----~~~l~~~i~~ll~~~~ 414 (459)
+|. .-|. .++.||+++|+|+|+.-... .+...++.- .-|..++.... .-+ .+.|+++|.++++++.
T Consensus 396 -~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~---G~~eiI~~g-~nG~lv~~~~~-~~d~~~~~~~la~~I~~ll~~~~ 469 (500)
T TIGR02918 396 -YLSASTSEGFGLTLMEAVGSGLGMIGFDVNY---GNPTFIEDN-KNGYLIPIDEE-EDDEDQIITALAEKIVEYFNSND 469 (500)
T ss_pred -EEEcCccccccHHHHHHHHhCCCEEEecCCC---CCHHHccCC-CCEEEEeCCcc-ccchhHHHHHHHHHHHHHhChHH
Confidence 665 3444 58999999999999865421 123334444 45766652100 122 7889999999996654
Q ss_pred hHHHHHHHHHHHHHHH
Q 012645 415 SQKIKRNVSKWREFAK 430 (459)
Q Consensus 415 ~~~~~~~a~~l~~~~~ 430 (459)
.+.+.+++++.++.+.
T Consensus 470 ~~~~~~~a~~~a~~fs 485 (500)
T TIGR02918 470 IDAFHEYSYQIAEGFL 485 (500)
T ss_pred HHHHHHHHHHHHHhcC
Confidence 4566777776655443
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=98.04 E-value=0.0072 Score=59.09 Aligned_cols=125 Identities=16% Similarity=0.120 Sum_probs=71.5
Q ss_pred EEEEEeCCccc-CCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhcCCCceEEeeecHHH---HhcccCcccee-
Q 012645 271 VIYVSFGSMAD-IAANQVDEIARGLKASEKPFLWVVKENENKLPVEFVNSVGETGLVVRWCNQFE---VLAHQAVGCFI- 345 (459)
Q Consensus 271 ~V~vs~Gs~~~-~~~~~~~~i~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~v~~~~p~~~---lL~~~~~~~~I- 345 (459)
++++-.|++.. ...+.+..+.. ...+..++++............ ...+||++.+++|+.+ .++++++..+-
T Consensus 206 ~~i~y~G~l~~~~d~~ll~~la~--~~p~~~~vliG~~~~~~~~~~~--~~~~nV~~~G~~~~~~l~~~l~~~Dv~l~P~ 281 (373)
T cd04950 206 PVIGYYGAIAEWLDLELLEALAK--ARPDWSFVLIGPVDVSIDPSAL--LRLPNVHYLGPKPYKELPAYLAGFDVAILPF 281 (373)
T ss_pred CEEEEEeccccccCHHHHHHHHH--HCCCCEEEEECCCcCccChhHh--ccCCCEEEeCCCCHHHHHHHHHhCCEEecCC
Confidence 55666788764 23333333222 2245666665432111111111 1247999999998764 57777773321
Q ss_pred -----ccCch-hhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcCh
Q 012645 346 -----THCGW-NSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 346 -----~HGG~-gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
+.++. +.+.|++++|+|+|..++ ...++.. + |..+. .-+++++.++|.+++.++
T Consensus 282 ~~~~~~~~~~P~Kl~EylA~G~PVVat~~-------~~~~~~~-~-~~~~~-----~~d~~~~~~ai~~~l~~~ 341 (373)
T cd04950 282 RLNELTRATSPLKLFEYLAAGKPVVATPL-------PEVRRYE-D-EVVLI-----ADDPEEFVAAIEKALLED 341 (373)
T ss_pred ccchhhhcCCcchHHHHhccCCCEEecCc-------HHHHhhc-C-cEEEe-----CCCHHHHHHHHHHHHhcC
Confidence 23343 358999999999998763 2223333 3 33333 347999999999987654
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >COG1817 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=98.03 E-value=0.0083 Score=54.80 Aligned_cols=111 Identities=15% Similarity=0.149 Sum_probs=77.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCc--cccccCCCCceEEEcCCCCCCCCCCCCCCHH-HHHHHHHH
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHY--TVKSIHATTVGVEPISDGFDEGGFKQAPSVK-AYLESFKT 84 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 84 (459)
|||.|= .+-.-|+-=+-.+-+.|.++||+|.+.+-+. -.+.+...|+.+..+...-. ..+. +......+
T Consensus 1 mkVwiD-I~n~~hvhfFk~lI~elekkG~ev~iT~rd~~~v~~LLd~ygf~~~~Igk~g~-------~tl~~Kl~~~~eR 72 (346)
T COG1817 1 MKVWID-IGNPPHVHFFKNLIWELEKKGHEVLITCRDFGVVTELLDLYGFPYKSIGKHGG-------VTLKEKLLESAER 72 (346)
T ss_pred CeEEEE-cCCcchhhHHHHHHHHHHhCCeEEEEEEeecCcHHHHHHHhCCCeEeecccCC-------ccHHHHHHHHHHH
Confidence 344443 3555688888999999999999998877643 33445667999998863311 1222 33333333
Q ss_pred hchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccch
Q 012645 85 VGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNS 134 (459)
Q Consensus 85 ~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~ 134 (459)
. ..+.+++.+. +||+.+. -.+..+..+|.-+|+|++.+.-+.
T Consensus 73 ~--~~L~ki~~~~-----kpdv~i~-~~s~~l~rvafgLg~psIi~~D~e 114 (346)
T COG1817 73 V--YKLSKIIAEF-----KPDVAIG-KHSPELPRVAFGLGIPSIIFVDNE 114 (346)
T ss_pred H--HHHHHHHhhc-----CCceEee-cCCcchhhHHhhcCCceEEecCCh
Confidence 2 4566677765 8999999 567889999999999999987655
|
|
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.00 E-value=0.0021 Score=65.07 Aligned_cols=82 Identities=20% Similarity=0.217 Sum_probs=59.4
Q ss_pred CCCceEEeeecHHHHhcccCccceecc----CchhhHHHhhhcCCeeeccccccchhhHHHHHHHh----hh-ceEEeee
Q 012645 321 GETGLVVRWCNQFEVLAHQAVGCFITH----CGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEV----WE-VGVRAKK 391 (459)
Q Consensus 321 ~~~v~v~~~~p~~~lL~~~~~~~~I~H----GG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~----~G-~G~~~~~ 391 (459)
.+||++.+.....++++.+++ +|.- |--.++.||+++|+|+|+. |.......++.. +| .|..++
T Consensus 353 ~~~V~f~G~~~v~~~l~~aDv--~vlpS~~Eg~p~~vlEAma~G~PVVat----d~g~~~elv~~~~~~~~g~~G~lv~- 425 (475)
T cd03813 353 EDNVKFTGFQNVKEYLPKLDV--LVLTSISEGQPLVILEAMAAGIPVVAT----DVGSCRELIEGADDEALGPAGEVVP- 425 (475)
T ss_pred CCeEEEcCCccHHHHHHhCCE--EEeCchhhcCChHHHHHHHcCCCEEEC----CCCChHHHhcCCcccccCCceEEEC-
Confidence 578888886666688877777 6643 3346899999999999884 334444455552 02 566665
Q ss_pred cCCCcccHHHHHHHHHHHhcCh
Q 012645 392 NRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 392 ~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
..+++++.++|.++++|+
T Consensus 426 ----~~d~~~la~ai~~ll~~~ 443 (475)
T cd03813 426 ----PADPEALARAILRLLKDP 443 (475)
T ss_pred ----CCCHHHHHHHHHHHhcCH
Confidence 467999999999999987
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=97.97 E-value=0.0016 Score=63.57 Aligned_cols=101 Identities=17% Similarity=0.168 Sum_probs=69.0
Q ss_pred cCCCceEEeeecHH-HHhcccCccceecc--CchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCc
Q 012645 320 VGETGLVVRWCNQF-EVLAHQAVGCFITH--CGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGI 396 (459)
Q Consensus 320 ~~~~v~v~~~~p~~-~lL~~~~~~~~I~H--GG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~ 396 (459)
..+++.+.++.++. .+++.+++-.+.++ |...++.||+++|+|+|+..... .....++.- ..|..++ .
T Consensus 259 ~~~~v~~~g~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~---g~~~~v~~~-~~G~lv~-----~ 329 (372)
T cd04949 259 LEDYVFLKGYTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNY---GPSEIIEDG-ENGYLVP-----K 329 (372)
T ss_pred CcceEEEcCCCCCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCC---CcHHHcccC-CCceEeC-----C
Confidence 34677777776665 78988888444444 33468999999999999865321 133444555 5676665 4
Q ss_pred ccHHHHHHHHHHHhcChh-hHHHHHHHHHHHHHH
Q 012645 397 VTGEELNKCVNEVMDGER-SQKIKRNVSKWREFA 429 (459)
Q Consensus 397 ~~~~~l~~~i~~ll~~~~-~~~~~~~a~~l~~~~ 429 (459)
-+.+++.++|.++++|++ .+.+.+++++.++.+
T Consensus 330 ~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~ 363 (372)
T cd04949 330 GDIEALAEAIIELLNDPKLLQKFSEAAYENAERY 363 (372)
T ss_pred CcHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHh
Confidence 689999999999999873 345666666655444
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.017 Score=57.44 Aligned_cols=80 Identities=14% Similarity=0.069 Sum_probs=54.3
Q ss_pred cCCCceEEeeecHH---HHhcccCccceecc---Cch-hhHHHhhhcCCeeeccccccchhhHHHHHH----HhhhceEE
Q 012645 320 VGETGLVVRWCNQF---EVLAHQAVGCFITH---CGW-NSILEGLSLGVAVVAVPQFSDQPTNAKFVE----EVWEVGVR 388 (459)
Q Consensus 320 ~~~~v~v~~~~p~~---~lL~~~~~~~~I~H---GG~-gs~~eal~~GvP~li~P~~~DQ~~na~rv~----~~~G~G~~ 388 (459)
..++|.+.+++|+. .+|+.+++ +|+- -|. -++.||+++|+|.|+.-..+. ..-+. .- ..|..
T Consensus 303 l~~~V~f~g~v~~~~l~~~l~~adv--~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp----~~~iv~~~~~g-~~G~l 375 (419)
T cd03806 303 LEDKVEFVVNAPFEELLEELSTASI--GLHTMWNEHFGIGVVEYMAAGLIPLAHASGGP----LLDIVVPWDGG-PTGFL 375 (419)
T ss_pred CCCeEEEecCCCHHHHHHHHHhCeE--EEECCccCCcccHHHHHHHcCCcEEEEcCCCC----chheeeccCCC-CceEE
Confidence 35789999999876 57777777 6642 233 478999999999987653221 11112 23 45543
Q ss_pred eeecCCCcccHHHHHHHHHHHhcCh
Q 012645 389 AKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 389 ~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
. . +++++.+++.++++++
T Consensus 376 ~------~-d~~~la~ai~~ll~~~ 393 (419)
T cd03806 376 A------S-TAEEYAEAIEKILSLS 393 (419)
T ss_pred e------C-CHHHHHHHHHHHHhCC
Confidence 2 3 7899999999999875
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >COG5017 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00023 Score=56.16 Aligned_cols=109 Identities=22% Similarity=0.192 Sum_probs=72.3
Q ss_pred EEEEeCCcccCCHHHH--HHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhcCCCceEEeee--c-HHHHhcccCccceec
Q 012645 272 IYVSFGSMADIAANQV--DEIARGLKASEKPFLWVVKENENKLPVEFVNSVGETGLVVRWC--N-QFEVLAHQAVGCFIT 346 (459)
Q Consensus 272 V~vs~Gs~~~~~~~~~--~~i~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~v~~~~--p-~~~lL~~~~~~~~I~ 346 (459)
+|||-||....-...+ .++.+-.+....++|+..++. +..| ..+ .++.+|. + -..+...+++ +|+
T Consensus 2 ifVTvGstf~~f~rlv~k~e~~el~~~i~e~lIvQyGn~-d~kp------vag-l~v~~F~~~~kiQsli~darI--VIS 71 (161)
T COG5017 2 IFVTVGSTFYPFNRLVLKIEVLELTELIQEELIVQYGNG-DIKP------VAG-LRVYGFDKEEKIQSLIHDARI--VIS 71 (161)
T ss_pred eEEEecCccchHHHHHhhHHHHHHHHHhhhheeeeecCC-Cccc------ccc-cEEEeechHHHHHHHhhcceE--EEe
Confidence 7899999853111111 113444455566888888875 2222 111 2344443 4 3367755555 999
Q ss_pred cCchhhHHHhhhcCCeeecccccc--------chhhHHHHHHHhhhceEEeee
Q 012645 347 HCGWNSILEGLSLGVAVVAVPQFS--------DQPTNAKFVEEVWEVGVRAKK 391 (459)
Q Consensus 347 HGG~gs~~eal~~GvP~li~P~~~--------DQ~~na~rv~~~~G~G~~~~~ 391 (459)
|+|-||++.++..++|.|++|-.. .|..-|..+.++ +.-....+
T Consensus 72 HaG~GSIL~~~rl~kplIv~pr~s~y~elvDdHQvela~klae~-~~vv~~sp 123 (161)
T COG5017 72 HAGEGSILLLLRLDKPLIVVPRSSQYQELVDDHQVELALKLAEI-NYVVACSP 123 (161)
T ss_pred ccCcchHHHHhhcCCcEEEEECchhHHHhhhhHHHHHHHHHHhc-CceEEEcC
Confidence 999999999999999999999543 478889999999 77666654
|
|
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00049 Score=67.63 Aligned_cols=138 Identities=21% Similarity=0.266 Sum_probs=81.6
Q ss_pred CCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCC---CCCchhhhhh--cCCCceEEeeecHHHHh---cc
Q 012645 267 PEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENE---NKLPVEFVNS--VGETGLVVRWCNQFEVL---AH 338 (459)
Q Consensus 267 ~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~---~~~~~~~~~~--~~~~v~v~~~~p~~~lL---~~ 338 (459)
+++.++|.+|.+..+..++.+..-.+.+++.+...+|...... ..+...+... .++++.+.+..|..+-| ..
T Consensus 282 p~d~vvF~~fn~~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~~~~~l~~~~~~~Gv~~~Ri~f~~~~~~~ehl~~~~~ 361 (468)
T PF13844_consen 282 PEDAVVFGSFNNLFKISPETLDLWARILKAVPNSRLWLLRFPASGEARLRRRFAAHGVDPDRIIFSPVAPREEHLRRYQL 361 (468)
T ss_dssp -SSSEEEEE-S-GGG--HHHHHHHHHHHHHSTTEEEEEEETSTTHHHHHHHHHHHTTS-GGGEEEEE---HHHHHHHGGG
T ss_pred CCCceEEEecCccccCCHHHHHHHHHHHHhCCCcEEEEeeCCHHHHHHHHHHHHHcCCChhhEEEcCCCCHHHHHHHhhh
Confidence 3456999999999999999999999999998888888876543 1111111111 24677777887766544 33
Q ss_pred cCccce---eccCchhhHHHhhhcCCeeeccccc-cchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcCh
Q 012645 339 QAVGCF---ITHCGWNSILEGLSLGVAVVAVPQF-SDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 339 ~~~~~~---I~HGG~gs~~eal~~GvP~li~P~~-~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
.|+ + ...+|.+|++|||+.|||+|.+|-- .=...-|..+..+ |+...+- .+.++-.+.-.++-+|.
T Consensus 362 ~DI--~LDT~p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~l-Gl~ElIA------~s~~eYv~~Av~La~D~ 431 (468)
T PF13844_consen 362 ADI--CLDTFPYNGGTTTLDALWMGVPVVTLPGETMASRVGASILRAL-GLPELIA------DSEEEYVEIAVRLATDP 431 (468)
T ss_dssp -SE--EE--SSS--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHH-T-GGGB-------SSHHHHHHHHHHHHH-H
T ss_pred CCE--EeeCCCCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHc-CCchhcC------CCHHHHHHHHHHHhCCH
Confidence 554 4 3578999999999999999999943 3445566677778 9987654 34555555555677776
|
|
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.0005 Score=59.00 Aligned_cols=134 Identities=19% Similarity=0.242 Sum_probs=82.5
Q ss_pred CCCcEEEEEeCCccc-CCHHHHHHHHHHHH---hCCCcEEEEEeCCC--CCCchhhh-hhcCCCceEEeeec--H-HHHh
Q 012645 267 PEKSVIYVSFGSMAD-IAANQVDEIARGLK---ASEKPFLWVVKENE--NKLPVEFV-NSVGETGLVVRWCN--Q-FEVL 336 (459)
Q Consensus 267 ~~~~~V~vs~Gs~~~-~~~~~~~~i~~a~~---~~~~~~v~~~~~~~--~~~~~~~~-~~~~~~v~v~~~~p--~-~~lL 336 (459)
++++.+++..|+... -..+.+-.++.-+. ...+.+++ ++... ..+..... .....++.+.++++ + ..++
T Consensus 12 ~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i-~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~ 90 (172)
T PF00534_consen 12 PDKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVI-VGDGEYKKELKNLIEKLNLKENIIFLGYVPDDELDELY 90 (172)
T ss_dssp -TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEE-ESHCCHHHHHHHHHHHTTCGTTEEEEESHSHHHHHHHH
T ss_pred CCCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEE-Eccccccccccccccccccccccccccccccccccccc
Confidence 345577788888764 22333333333222 23333333 33221 11111111 12457888999998 2 2688
Q ss_pred cccCccceecc----CchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcC
Q 012645 337 AHQAVGCFITH----CGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDG 412 (459)
Q Consensus 337 ~~~~~~~~I~H----GG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~ 412 (459)
..+++ +|+. |...++.||+++|+|+|+. |...+...+... +.|..++ ..+.+++.++|.+++++
T Consensus 91 ~~~di--~v~~s~~e~~~~~~~Ea~~~g~pvI~~----~~~~~~e~~~~~-~~g~~~~-----~~~~~~l~~~i~~~l~~ 158 (172)
T PF00534_consen 91 KSSDI--FVSPSRNEGFGLSLLEAMACGCPVIAS----DIGGNNEIINDG-VNGFLFD-----PNDIEELADAIEKLLND 158 (172)
T ss_dssp HHTSE--EEE-BSSBSS-HHHHHHHHTT-EEEEE----SSTHHHHHSGTT-TSEEEES-----TTSHHHHHHHHHHHHHH
T ss_pred cccee--ccccccccccccccccccccccceeec----cccCCceeeccc-cceEEeC-----CCCHHHHHHHHHHHHCC
Confidence 78777 8877 6677999999999999864 455566666666 6687776 45999999999999998
Q ss_pred h
Q 012645 413 E 413 (459)
Q Consensus 413 ~ 413 (459)
+
T Consensus 159 ~ 159 (172)
T PF00534_consen 159 P 159 (172)
T ss_dssp H
T ss_pred H
Confidence 6
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.0017 Score=64.38 Aligned_cols=133 Identities=20% Similarity=0.237 Sum_probs=79.7
Q ss_pred CcEEEEEeCCcccCCHHHHHHHHHHHHh---C--CCcEEEEEeCCCCCCchhhhh-----hcCCCceEEeeecHHH---H
Q 012645 269 KSVIYVSFGSMADIAANQVDEIARGLKA---S--EKPFLWVVKENENKLPVEFVN-----SVGETGLVVRWCNQFE---V 335 (459)
Q Consensus 269 ~~~V~vs~Gs~~~~~~~~~~~i~~a~~~---~--~~~~v~~~~~~~~~~~~~~~~-----~~~~~v~v~~~~p~~~---l 335 (459)
++..+++.|...... .+..+++++.. . +.++.|.+-+. +...+.+.+ ...++|.+.+|+++.+ +
T Consensus 229 ~~~~il~~Grl~~~K--g~~~li~a~~~l~~~~p~~~l~~~iiG~-g~~~~~l~~~~~~~~~~~~V~f~G~v~~~e~~~~ 305 (407)
T cd04946 229 DTLRIVSCSYLVPVK--RVDLIIKALAALAKARPSIKIKWTHIGG-GPLEDTLKELAESKPENISVNFTGELSNSEVYKL 305 (407)
T ss_pred CCEEEEEeecccccc--CHHHHHHHHHHHHHhCCCceEEEEEEeC-chHHHHHHHHHHhcCCCceEEEecCCChHHHHHH
Confidence 346677778776422 23333444333 2 24565544332 111111211 1235688889999764 4
Q ss_pred hcccCccceeccCc----hhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhc
Q 012645 336 LAHQAVGCFITHCG----WNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMD 411 (459)
Q Consensus 336 L~~~~~~~~I~HGG----~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~ 411 (459)
+..+++.++|...- -.+++||+++|+|+|+... ......+... +.|..+.. ..+.+++.++|.++++
T Consensus 306 ~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~v----gg~~e~i~~~-~~G~l~~~----~~~~~~la~~I~~ll~ 376 (407)
T cd04946 306 YKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNV----GGTPEIVDNG-GNGLLLSK----DPTPNELVSSLSKFID 376 (407)
T ss_pred HhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCC----CCcHHHhcCC-CcEEEeCC----CCCHHHHHHHHHHHHh
Confidence 44444444765442 3589999999999988543 3345555555 57866653 3588999999999999
Q ss_pred Ch
Q 012645 412 GE 413 (459)
Q Consensus 412 ~~ 413 (459)
|+
T Consensus 377 ~~ 378 (407)
T cd04946 377 NE 378 (407)
T ss_pred CH
Confidence 86
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.0089 Score=53.25 Aligned_cols=71 Identities=18% Similarity=0.110 Sum_probs=50.4
Q ss_pred CccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcCCCCCCCCCCCCCCHHHHHHHHHHhchHHHHHHHHH
Q 012645 17 AQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDEGGFKQAPSVKAYLESFKTVGSRTLAEVILK 96 (459)
Q Consensus 17 ~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 96 (459)
..|+......|++.|.++||+|++.+ .....+...+++
T Consensus 12 ~~G~~~~~~~l~~~L~~~g~~v~v~~------------------------------------------~~~~~~~~~~~~ 49 (229)
T cd01635 12 GGGVELVLLDLAKALARRGHEVEVVA------------------------------------------LLLLLLLRILRG 49 (229)
T ss_pred CCCchhHHHHHHHHHHHcCCeEEEEE------------------------------------------echHHHHHHHhh
Confidence 67999999999999999999999998 001111122222
Q ss_pred hhcCCCCccEEEeCCCchhHH---HHHHHcCCceEEEccch
Q 012645 97 YKDSESPVNCIVYDSLLTWAL---DVARQFGIYGAAMMTNS 134 (459)
Q Consensus 97 ~~~~~~~~Dlvi~D~~~~~~~---~~a~~lgiP~v~~~~~~ 134 (459)
.+||+|++........ ..+...++|++...+..
T Consensus 50 -----~~~D~i~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~ 85 (229)
T cd01635 50 -----FKPDVVHAHGYYPAPLALLLAARLLGIPLVLTVHGV 85 (229)
T ss_pred -----cCCCEEEEcCCCcHHHHHHHHHhhCCCCEEEEEcCc
Confidence 2899999887665433 45778899988876544
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.0061 Score=59.77 Aligned_cols=83 Identities=13% Similarity=0.160 Sum_probs=60.3
Q ss_pred cCCCceEEeeecHH---HHhcccCccceecc----Cch-hhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeee
Q 012645 320 VGETGLVVRWCNQF---EVLAHQAVGCFITH----CGW-NSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKK 391 (459)
Q Consensus 320 ~~~~v~v~~~~p~~---~lL~~~~~~~~I~H----GG~-gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~ 391 (459)
...++.+.+++|+. .+++.+++ +|.. .|. .++.||+++|+|+|+.... .+...++.- ..|..+..
T Consensus 255 l~~~v~~~G~~~~~~l~~~~~~aDv--~v~pS~~~E~f~~~~lEAma~G~PVI~s~~g----g~~Eiv~~~-~~G~~l~~ 327 (380)
T PRK15484 255 IGDRCIMLGGQPPEKMHNYYPLADL--VVVPSQVEEAFCMVAVEAMAAGKPVLASTKG----GITEFVLEG-ITGYHLAE 327 (380)
T ss_pred cCCcEEEeCCCCHHHHHHHHHhCCE--EEeCCCCccccccHHHHHHHcCCCEEEeCCC----CcHhhcccC-CceEEEeC
Confidence 45678888999865 56877887 6642 444 5778999999999987653 344445555 56764432
Q ss_pred cCCCcccHHHHHHHHHHHhcCh
Q 012645 392 NRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 392 ~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
..+++++.++|.++++|+
T Consensus 328 ----~~d~~~la~~I~~ll~d~ 345 (380)
T PRK15484 328 ----PMTSDSIISDINRTLADP 345 (380)
T ss_pred ----CCCHHHHHHHHHHHHcCH
Confidence 467999999999999997
|
|
| >TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.0024 Score=60.96 Aligned_cols=104 Identities=12% Similarity=0.085 Sum_probs=66.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEecCccccccCC-CCce-EEEcCCCCCCCCCCCCCCHHHHHHHHHH
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASK--RVKATLATTHYTVKSIHA-TTVG-VEPISDGFDEGGFKQAPSVKAYLESFKT 84 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~--Gh~V~~~~~~~~~~~~~~-~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (459)
|||++-....||+.=+.++.++|+++ +.+|++++.+.+.+.++. +.++ ++.++.. .. . .. .+. .
T Consensus 1 ~ILiir~~~iGD~vl~~p~l~~Lr~~~P~a~I~~l~~~~~~~~~~~~p~vd~v~~~~~~--~~--~--~~---~~~---~ 68 (319)
T TIGR02193 1 RILIVKTSSLGDVIHTLPALTDIKRALPDVEIDWVVEEGFADIVRLHPAVDEVIPVALR--RW--R--KT---LFS---A 68 (319)
T ss_pred CEEEEecccHHHHHHHHHHHHHHHHhCCCCEEEEEEChhHhhhhhcCCCccEEEEechh--hh--h--hc---ccc---c
Confidence 68999999999999999999999997 999999999999888876 5564 5555421 00 0 00 000 0
Q ss_pred hchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCc
Q 012645 85 VGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIY 126 (459)
Q Consensus 85 ~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP 126 (459)
.....+..+.+.+++. ++|++|.-........++...+.+
T Consensus 69 ~~~~~~~~~~~~lr~~--~yD~vi~~~~~~~s~~l~~~~~~~ 108 (319)
T TIGR02193 69 ATWREIKALRALLRAE--RYDAVIDAQGLIKSALVARMARGP 108 (319)
T ss_pred hhHHHHHHHHHHHhhc--cchhhhhhhhhHHHHHHHHhhCCc
Confidence 0011222333334333 899998544434455566666644
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.14 Score=50.61 Aligned_cols=115 Identities=12% Similarity=0.037 Sum_probs=64.0
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHHhCCCcE-EEEEeCCCCCCchhhhhhcCCCceEEeeec-H---HHHhcccCcccee
Q 012645 271 VIYVSFGSMADIAANQVDEIARGLKASEKPF-LWVVKENENKLPVEFVNSVGETGLVVRWCN-Q---FEVLAHQAVGCFI 345 (459)
Q Consensus 271 ~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~-v~~~~~~~~~~~~~~~~~~~~~v~v~~~~p-~---~~lL~~~~~~~~I 345 (459)
.+++..|.....+...+..+++|+...+.++ ++.++..+.. ...++...++.. + ..+++.+++ ||
T Consensus 242 ~~il~v~~~~~~~~Kg~~~li~A~~~l~~~~~L~ivG~g~~~--------~~~~v~~~g~~~~~~~l~~~y~~aDv--fV 311 (405)
T PRK10125 242 PKIAVVAHDLRYDGKTDQQLVREMMALGDKIELHTFGKFSPF--------TAGNVVNHGFETDKRKLMSALNQMDA--LV 311 (405)
T ss_pred CEEEEEEeccccCCccHHHHHHHHHhCCCCeEEEEEcCCCcc--------cccceEEecCcCCHHHHHHHHHhCCE--EE
Confidence 3444455422222233466788887765443 3334332110 123455555553 2 345656777 77
Q ss_pred cc----CchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHH
Q 012645 346 TH----CGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCV 406 (459)
Q Consensus 346 ~H----GG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i 406 (459)
.- |--.+++||+++|+|+|.....+ . ..+... +-|..++. -+.+.|++.+
T Consensus 312 ~pS~~Egfp~vilEAmA~G~PVVat~~gG----~-~Eiv~~-~~G~lv~~-----~d~~~La~~~ 365 (405)
T PRK10125 312 FSSRVDNYPLILCEALSIGVPVIATHSDA----A-REVLQK-SGGKTVSE-----EEVLQLAQLS 365 (405)
T ss_pred ECCccccCcCHHHHHHHcCCCEEEeCCCC----h-HHhEeC-CcEEEECC-----CCHHHHHhcc
Confidence 53 33368999999999999987754 1 123334 55776763 4667777643
|
|
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.35 Score=50.06 Aligned_cols=76 Identities=20% Similarity=0.148 Sum_probs=51.5
Q ss_pred CceEEeeecHH-HHhcccCccceecc---Cc-hhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcc
Q 012645 323 TGLVVRWCNQF-EVLAHQAVGCFITH---CG-WNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIV 397 (459)
Q Consensus 323 ~v~v~~~~p~~-~lL~~~~~~~~I~H---GG-~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~ 397 (459)
++.+.++.++. .+++.+++ ||.- =| ..+++||+++|+|+|+.-..+... +..- +-| .+ --
T Consensus 602 ~V~FLG~~dd~~~lyasaDV--FVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~e~-----V~~g-~nG-ll------~~ 666 (794)
T PLN02501 602 NLNFLKGRDHADDSLHGYKV--FINPSISDVLCTATAEALAMGKFVVCADHPSNEF-----FRSF-PNC-LT------YK 666 (794)
T ss_pred EEEecCCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCCEEEecCCCCce-----Eeec-CCe-Ee------cC
Confidence 35566777765 58977777 7763 33 368999999999999987654321 1112 222 22 24
Q ss_pred cHHHHHHHHHHHhcCh
Q 012645 398 TGEELNKCVNEVMDGE 413 (459)
Q Consensus 398 ~~~~l~~~i~~ll~~~ 413 (459)
+.+.+.++|.++|+++
T Consensus 667 D~EafAeAI~~LLsd~ 682 (794)
T PLN02501 667 TSEDFVAKVKEALANE 682 (794)
T ss_pred CHHHHHHHHHHHHhCc
Confidence 6899999999999986
|
|
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.43 Score=48.40 Aligned_cols=114 Identities=20% Similarity=0.128 Sum_probs=65.7
Q ss_pred EEEEEeCCccc--CCHHHHHHHHHHHHh-CCCcEEEEEeCCC-CCCchhhhh-hcCCCceEEeeecHH-HHhcccCccce
Q 012645 271 VIYVSFGSMAD--IAANQVDEIARGLKA-SEKPFLWVVKENE-NKLPVEFVN-SVGETGLVVRWCNQF-EVLAHQAVGCF 344 (459)
Q Consensus 271 ~V~vs~Gs~~~--~~~~~~~~i~~a~~~-~~~~~v~~~~~~~-~~~~~~~~~-~~~~~v~v~~~~p~~-~lL~~~~~~~~ 344 (459)
+++.+.|.... .....+..+...++. .+.+++++..+.. +.+.....+ ...++|++.++..+. .+|+.+++ |
T Consensus 399 ~vIg~VgRl~~~Kg~~~LI~A~a~llk~~pdirLvIVGdG~~~eeLk~la~elgL~d~V~FlG~~~Dv~~~LaaADV--f 476 (578)
T PRK15490 399 TTIGGVFRFVGDKNPFAWIDFAARYLQHHPATRFVLVGDGDLRAEAQKRAEQLGILERILFVGASRDVGYWLQKMNV--F 476 (578)
T ss_pred cEEEEEEEEehhcCHHHHHHHHHHHHhHCCCeEEEEEeCchhHHHHHHHHHHcCCCCcEEECCChhhHHHHHHhCCE--E
Confidence 45555565432 223334444444443 3455555443221 111111111 134788888887554 68888888 8
Q ss_pred ec---cCc-hhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeee
Q 012645 345 IT---HCG-WNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKK 391 (459)
Q Consensus 345 I~---HGG-~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~ 391 (459)
|. .-| .+++.||+++|+|+|+... ..+...+..- ..|..++.
T Consensus 477 VlPS~~EGfp~vlLEAMA~GlPVVATdv----GG~~EiV~dG-~nG~LVp~ 522 (578)
T PRK15490 477 ILFSRYEGLPNVLIEAQMVGVPVISTPA----GGSAECFIEG-VSGFILDD 522 (578)
T ss_pred EEcccccCccHHHHHHHHhCCCEEEeCC----CCcHHHcccC-CcEEEECC
Confidence 75 345 4699999999999997654 3455556666 67777764
|
|
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.71 Score=49.71 Aligned_cols=133 Identities=9% Similarity=0.080 Sum_probs=72.0
Q ss_pred EEEEEeCCccc-CCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhh---hhhc--CCCceEEeeecHH---HHhcccCc
Q 012645 271 VIYVSFGSMAD-IAANQVDEIARGLKASEKPFLWVVKENENKLPVEF---VNSV--GETGLVVRWCNQF---EVLAHQAV 341 (459)
Q Consensus 271 ~V~vs~Gs~~~-~~~~~~~~i~~a~~~~~~~~v~~~~~~~~~~~~~~---~~~~--~~~v~v~~~~p~~---~lL~~~~~ 341 (459)
+++...|.... -..+.+...+..+...+.+++++..+........+ ..+. .++|.+..+.+.. .+++.+++
T Consensus 780 pLIg~VGRL~~QKGiDlLleA~~~Ll~~dvqLVIvGdGp~~~~e~eL~~La~~l~l~drV~FlG~~de~lah~IYAaADI 859 (977)
T PLN02939 780 PLVGCITRLVPQKGVHLIRHAIYKTAELGGQFVLLGSSPVPHIQREFEGIADQFQSNNNIRLILKYDEALSHSIYAASDM 859 (977)
T ss_pred eEEEEeecCCcccChHHHHHHHHHHhhcCCEEEEEeCCCcHHHHHHHHHHHHHcCCCCeEEEEeccCHHHHHHHHHhCCE
Confidence 56666677653 22233222222222345666555432111111112 1222 4678888887764 47877777
Q ss_pred cceecc---Cc-hhhHHHhhhcCCeeecccccc--chhhH--HHHH-HHhhhceEEeeecCCCcccHHHHHHHHHHHhc
Q 012645 342 GCFITH---CG-WNSILEGLSLGVAVVAVPQFS--DQPTN--AKFV-EEVWEVGVRAKKNRAGIVTGEELNKCVNEVMD 411 (459)
Q Consensus 342 ~~~I~H---GG-~gs~~eal~~GvP~li~P~~~--DQ~~n--a~rv-~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~ 411 (459)
||.- =| ..+.+||+++|+|.|+....+ |-..+ ...+ +.- +-|.... ..+++.|.++|.++++
T Consensus 860 --FLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg-~NGfLf~-----~~D~eaLa~AL~rAL~ 930 (977)
T PLN02939 860 --FIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVEL-RNGFTFL-----TPDEQGLNSALERAFN 930 (977)
T ss_pred --EEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCC-CceEEec-----CCCHHHHHHHHHHHHH
Confidence 8853 22 347899999999998876533 22211 1111 122 3455554 4678888888888764
|
|
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0036 Score=51.21 Aligned_cols=127 Identities=21% Similarity=0.245 Sum_probs=66.0
Q ss_pred EEEEEeCCccc-CCHHHHHH-HHHHHHhCCCcEEEEEeCCCCCCchhhhhhcCCCceEEeeecHH-HHhcccCccceecc
Q 012645 271 VIYVSFGSMAD-IAANQVDE-IARGLKASEKPFLWVVKENENKLPVEFVNSVGETGLVVRWCNQF-EVLAHQAVGCFITH 347 (459)
Q Consensus 271 ~V~vs~Gs~~~-~~~~~~~~-i~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~v~~~~p~~-~lL~~~~~~~~I~H 347 (459)
+.++++|+... ...+.+-. +++.+.+...++-+.+-+. .++.+.+...+||++.+|++.. ++++.+++....+.
T Consensus 3 ~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~---~~~~l~~~~~~~v~~~g~~~e~~~~l~~~dv~l~p~~ 79 (135)
T PF13692_consen 3 LYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGN---GPDELKRLRRPNVRFHGFVEELPEILAAADVGLIPSR 79 (135)
T ss_dssp EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECE---SS-HHCCHHHCTEEEE-S-HHHHHHHHC-SEEEE-BS
T ss_pred ccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeC---CHHHHHHhcCCCEEEcCCHHHHHHHHHhCCEEEEEee
Confidence 45556666543 23333333 5555544222333333221 2222221124699999999755 78888888555442
Q ss_pred --Cc-hhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcC
Q 012645 348 --CG-WNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDG 412 (459)
Q Consensus 348 --GG-~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~ 412 (459)
.| .+++.|++++|+|+|+.+.. ....++.. +.|..+ . -+++++.++|.++++|
T Consensus 80 ~~~~~~~k~~e~~~~G~pvi~~~~~-----~~~~~~~~-~~~~~~--~----~~~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 80 FNEGFPNKLLEAMAAGKPVIASDNG-----AEGIVEED-GCGVLV--A----NDPEELAEAIERLLND 135 (135)
T ss_dssp S-SCC-HHHHHHHCTT--EEEEHHH-----CHCHS----SEEEE---T----T-HHHHHHHHHHHHH-
T ss_pred CCCcCcHHHHHHHHhCCCEEECCcc-----hhhheeec-CCeEEE--C----CCHHHHHHHHHHHhcC
Confidence 23 48999999999999997761 22334446 777666 2 4899999999999875
|
|
| >PRK10017 colanic acid biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.46 Score=47.04 Aligned_cols=174 Identities=8% Similarity=0.142 Sum_probs=99.2
Q ss_pred hhhhccCCCCcEEEEEeCCcccC------C-H---HHHHHHHHHHHhCCCcEEEEEeCCC-C-CCc------hhhhhhcC
Q 012645 260 MRWLATKPEKSVIYVSFGSMADI------A-A---NQVDEIARGLKASEKPFLWVVKENE-N-KLP------VEFVNSVG 321 (459)
Q Consensus 260 ~~~l~~~~~~~~V~vs~Gs~~~~------~-~---~~~~~i~~a~~~~~~~~v~~~~~~~-~-~~~------~~~~~~~~ 321 (459)
..|+...+.++.|.|+....... . . ..+..+++.+...|++++++..... . ..+ ..+.+..+
T Consensus 225 ~~~~~~~~~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~~g~~Vv~lp~~~~~~~~~~dD~~~~~~l~~~~~ 304 (426)
T PRK10017 225 QHWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRIIDEGYQVIALSTCTGIDSYNKDDRMVALNLRQHVS 304 (426)
T ss_pred hhhhcccccCCEEEEEecccccccccccccHHHHHHHHHHHHHHHHHCCCeEEEEecccCccCCCCchHHHHHHHHHhcc
Confidence 34554333456888886644311 1 1 2233455555556888776643211 0 011 11222222
Q ss_pred --CCceEE--eeecHH--HHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEE-eeecCC
Q 012645 322 --ETGLVV--RWCNQF--EVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVR-AKKNRA 394 (459)
Q Consensus 322 --~~v~v~--~~~p~~--~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~-~~~~~~ 394 (459)
.++++. ++-|.+ .+++++++ +|..= .=++.-|+..|||.+.++. | +-....++.+ |.... .+..
T Consensus 305 ~~~~~~vi~~~~~~~e~~~iIs~~dl--~ig~R-lHa~I~a~~~gvP~i~i~Y--~-~K~~~~~~~l-g~~~~~~~~~-- 375 (426)
T PRK10017 305 DPARYHVVMDELNDLEMGKILGACEL--TVGTR-LHSAIISMNFGTPAIAINY--E-HKSAGIMQQL-GLPEMAIDIR-- 375 (426)
T ss_pred cccceeEecCCCChHHHHHHHhhCCE--EEEec-chHHHHHHHcCCCEEEeee--h-HHHHHHHHHc-CCccEEechh--
Confidence 333443 233443 78866666 88642 2356668889999999998 3 4444555777 88876 5555
Q ss_pred CcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012645 395 GIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLL 451 (459)
Q Consensus 395 ~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~ 451 (459)
.++.+.|.+.+.++++|.+ +++++.++--++.+. .+...+.++++.+-
T Consensus 376 -~l~~~~Li~~v~~~~~~r~--~~~~~l~~~v~~~r~------~~~~~~~~~~~~~~ 423 (426)
T PRK10017 376 -HLLDGSLQAMVADTLGQLP--ALNARLAEAVSRERQ------TGMQMVQSVLERIG 423 (426)
T ss_pred -hCCHHHHHHHHHHHHhCHH--HHHHHHHHHHHHHHH------HHHHHHHHHHHHhc
Confidence 8999999999999999862 555555444444442 11345555555543
|
|
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.53 Score=47.71 Aligned_cols=39 Identities=13% Similarity=0.141 Sum_probs=30.8
Q ss_pred CCCcEEEEEcC--------CCccCHHHHHHHHHHHHhCCCeEEEEecCc
Q 012645 5 RERVHVLVLTY--------PAQGHINPLLQFAKRLASKRVKATLATTHY 45 (459)
Q Consensus 5 ~~~~kil~~~~--------~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~ 45 (459)
|++||||+++. |+.|++ .-.|.++|+++||+|.++.+.+
T Consensus 1 ~~~~~il~v~~E~~p~~k~ggl~dv--~~~lp~~l~~~g~~v~v~~P~y 47 (485)
T PRK14099 1 MTPLRVLSVASEIFPLIKTGGLADV--AGALPAALKAHGVEVRTLVPGY 47 (485)
T ss_pred CCCcEEEEEEeccccccCCCcHHHH--HHHHHHHHHHCCCcEEEEeCCC
Confidence 57799999983 444444 5678899999999999999854
|
|
| >PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.013 Score=48.23 Aligned_cols=102 Identities=13% Similarity=0.124 Sum_probs=66.0
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCcccccc-CCCCceEEEcCCCCCCCCCCCCCCHHHHHHHHHHhch
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSI-HATTVGVEPISDGFDEGGFKQAPSVKAYLESFKTVGS 87 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (459)
|||+++.....| ...+++.|.++||+|++++.....+.. ...|+.+..++.. .......+ .. .
T Consensus 1 KIl~i~~~~~~~---~~~~~~~L~~~g~~V~ii~~~~~~~~~~~~~~i~~~~~~~~--------~k~~~~~~----~~-~ 64 (139)
T PF13477_consen 1 KILLIGNTPSTF---IYNLAKELKKRGYDVHIITPRNDYEKYEIIEGIKVIRLPSP--------RKSPLNYI----KY-F 64 (139)
T ss_pred CEEEEecCcHHH---HHHHHHHHHHCCCEEEEEEcCCCchhhhHhCCeEEEEecCC--------CCccHHHH----HH-H
Confidence 578888766666 457799999999999999996554333 3468888888522 11111222 11 1
Q ss_pred HHHHHHHHHhhcCCCCccEEEeCCCch---hHHHHHHHcC-CceEEEcc
Q 012645 88 RTLAEVILKYKDSESPVNCIVYDSLLT---WALDVARQFG-IYGAAMMT 132 (459)
Q Consensus 88 ~~~~~l~~~~~~~~~~~Dlvi~D~~~~---~~~~~a~~lg-iP~v~~~~ 132 (459)
.+..++++. +||+|.+..... .+..++...| +|.+...+
T Consensus 65 -~l~k~ik~~-----~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~h 107 (139)
T PF13477_consen 65 -RLRKIIKKE-----KPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVH 107 (139)
T ss_pred -HHHHHhccC-----CCCEEEEecCChHHHHHHHHHHHcCCCCEEEEec
Confidence 334455543 899998776543 2455667888 89886544
|
|
| >TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.34 Score=46.69 Aligned_cols=104 Identities=7% Similarity=0.037 Sum_probs=70.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEecCccccccCC-CCce-EEEcCCCCCCCCCCCCCCHHHHHHHHHH
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASK--RVKATLATTHYTVKSIHA-TTVG-VEPISDGFDEGGFKQAPSVKAYLESFKT 84 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~--Gh~V~~~~~~~~~~~~~~-~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (459)
|||++-....||+.=+.++.++|+++ +.+|++++.+.+.+.++. +.++ ++.++.... ... . ..+.
T Consensus 1 rILii~~~~iGD~vl~tp~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~p~vd~vi~~~~~~~------~~~-~---~~~~- 69 (344)
T TIGR02201 1 RILLIKLRHHGDMLLTTPVISSLKKNYPDAKIDVLLYQETIPILSENPDINALYGLDRKKA------KAG-E---RKLA- 69 (344)
T ss_pred CEEEEEeccccceeeHHHHHHHHHHHCCCCEEEEEECcChHHHHhcCCCccEEEEeChhhh------cch-H---HHHH-
Confidence 68999999999999999999999985 899999999999888776 5564 344431100 000 0 0011
Q ss_pred hchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEE
Q 012645 85 VGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAA 129 (459)
Q Consensus 85 ~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~ 129 (459)
....++..++.. ++|++|.=.....+..++...|.|.-+
T Consensus 70 ----~~~~l~~~lr~~--~yD~vidl~~~~~s~ll~~l~~a~~ri 108 (344)
T TIGR02201 70 ----NQFHLIKVLRAN--RYDLVVNLTDQWMVAILVKLLNARVKI 108 (344)
T ss_pred ----HHHHHHHHHHhC--CCCEEEECCcchHHHHHHHhcCCCeEE
Confidence 111234444444 899998654445567788888988655
|
This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II. |
| >PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.16 Score=49.09 Aligned_cols=102 Identities=9% Similarity=-0.001 Sum_probs=70.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEecCccccccCC-CCceEEE-cCCCCCCCCCCCCCCHHHHHHHHH
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASK--RVKATLATTHYTVKSIHA-TTVGVEP-ISDGFDEGGFKQAPSVKAYLESFK 83 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~--Gh~V~~~~~~~~~~~~~~-~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 83 (459)
||||++-..+.||+.=..++.++|+++ +.+|++++.+.+.+.++. +.++-+- ++.. ..... +
T Consensus 1 mrILii~~~~iGD~il~tP~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~P~vd~vi~~~~~---------~~~~~-~---- 66 (348)
T PRK10916 1 MKILVIGPSWVGDMMMSQSLYRTLKARYPQAIIDVMAPAWCRPLLSRMPEVNEAIPMPLG---------HGALE-I---- 66 (348)
T ss_pred CcEEEEccCcccHHHhHHHHHHHHHHHCCCCeEEEEechhhHHHHhcCCccCEEEecccc---------cchhh-h----
Confidence 689999999999999999999999985 899999999999888876 5555432 3211 00000 0
Q ss_pred HhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEE
Q 012645 84 TVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAA 129 (459)
Q Consensus 84 ~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~ 129 (459)
....+++..++.. ++|++|.=....-...++...|+|.-.
T Consensus 67 ----~~~~~l~~~lr~~--~yD~vidl~~~~~s~~l~~~~~~~~ri 106 (348)
T PRK10916 67 ----GERRRLGHSLREK--RYDRAYVLPNSFKSALVPFFAGIPHRT 106 (348)
T ss_pred ----HHHHHHHHHHHhc--CCCEEEECCCcHHHHHHHHHcCCCeEe
Confidence 1122344455444 899998654445566777777887654
|
|
| >PRK10422 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.092 Score=50.86 Aligned_cols=105 Identities=10% Similarity=0.050 Sum_probs=71.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEecCccccccCC-CCceE-EEcCCCCCCCCCCCCCCHHHHHHHH
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASK--RVKATLATTHYTVKSIHA-TTVGV-EPISDGFDEGGFKQAPSVKAYLESF 82 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~--Gh~V~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (459)
.||||++-....||+.=..++.++|+++ +.+|++++.+.+.+.++. +.++- +.++.. ....... +
T Consensus 5 ~~~ILii~~~~iGD~vl~~P~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~P~id~vi~~~~~--------~~~~~~~---~ 73 (352)
T PRK10422 5 FRRILIIKMRFHGDMLLTTPVISSLKKNYPDAKIDVLLYQDTIPILSENPEINALYGIKNK--------KAGASEK---I 73 (352)
T ss_pred CceEEEEEecccCceeeHHHHHHHHHHHCCCCeEEEEeccChHHHhccCCCceEEEEeccc--------cccHHHH---H
Confidence 5799999999999999999999999986 899999999999888776 45543 333311 0000111 1
Q ss_pred HHhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEE
Q 012645 83 KTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAA 129 (459)
Q Consensus 83 ~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~ 129 (459)
..+..++.+++.. ++|++|.-........++...|.|..+
T Consensus 74 -----~~~~~l~~~lr~~--~yD~vidl~~~~~s~ll~~l~~a~~ri 113 (352)
T PRK10422 74 -----KNFFSLIKVLRAN--KYDLIVNLTDQWMVALLVRLLNARVKI 113 (352)
T ss_pred -----HHHHHHHHHHhhC--CCCEEEEcccchHHHHHHHHhCCCeEE
Confidence 1122344555544 899999654444456667777877655
|
|
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.011 Score=56.80 Aligned_cols=112 Identities=17% Similarity=0.208 Sum_probs=76.1
Q ss_pred cCCCceEEeeecHHHHhcc-cCccceeccC--------ch------hhHHHhhhcCCeeeccccccchhhHHHHHHHhhh
Q 012645 320 VGETGLVVRWCNQFEVLAH-QAVGCFITHC--------GW------NSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWE 384 (459)
Q Consensus 320 ~~~~v~v~~~~p~~~lL~~-~~~~~~I~HG--------G~------gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G 384 (459)
..+||.+.+|+|+.++..+ ...-++|.-+ .+ +-+.+.+++|+|+|+. ++...+..|++. +
T Consensus 205 ~~~~V~f~G~~~~eel~~~l~~~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~----~~~~~~~~V~~~-~ 279 (333)
T PRK09814 205 NSANISYKGWFDPEELPNELSKGFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVW----SKAAIADFIVEN-G 279 (333)
T ss_pred cCCCeEEecCCCHHHHHHHHhcCcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEEC----CCccHHHHHHhC-C
Confidence 4578999999998866421 1111122221 11 1267789999999985 456788899999 9
Q ss_pred ceEEeeecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHH
Q 012645 385 VGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVV 448 (459)
Q Consensus 385 ~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~ 448 (459)
+|..++ +.+++.+++.++. +.+.+.+++|++++++.+++ |.-...++.+++.
T Consensus 280 ~G~~v~-------~~~el~~~l~~~~-~~~~~~m~~n~~~~~~~~~~----g~~~~~~~~~~~~ 331 (333)
T PRK09814 280 LGFVVD-------SLEELPEIIDNIT-EEEYQEMVENVKKISKLLRN----GYFTKKALVDAIK 331 (333)
T ss_pred ceEEeC-------CHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHhc----chhHHHHHHHHHh
Confidence 998876 3457888888754 34456799999999999986 4444455555443
|
|
| >PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.11 Score=49.51 Aligned_cols=49 Identities=10% Similarity=0.062 Sum_probs=43.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEecCccccccCC-CCce
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASK--RVKATLATTHYTVKSIHA-TTVG 56 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~--Gh~V~~~~~~~~~~~~~~-~g~~ 56 (459)
||||++-....||+.=..++.+.|+++ +.+|++++.+.+.+.++. +.++
T Consensus 1 m~ILii~~~~iGD~v~~~p~~~~lk~~~P~a~I~~l~~~~~~~l~~~~p~vd 52 (322)
T PRK10964 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIQFDWVVEEGFAQIPSWHPAVD 52 (322)
T ss_pred CeEEEEeccchHHHHhHHHHHHHHHHhCCCCEEEEEECHHHHHHHhcCCCcc
Confidence 799999999999999999999999986 999999999988887765 4454
|
|
| >PF06722 DUF1205: Protein of unknown function (DUF1205); InterPro: IPR010610 This entry represents a conserved region of unknown function within bacterial glycosyl transferases | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.0029 Score=48.20 Aligned_cols=62 Identities=11% Similarity=0.261 Sum_probs=47.5
Q ss_pred hhhhhccCCCCcEEEEEeCCcccC---C--HHHHHHHHHHHHhCCCcEEEEEeCCC-CCCchhhhhhcCCCce
Q 012645 259 CMRWLATKPEKSVIYVSFGSMADI---A--ANQVDEIARGLKASEKPFLWVVKENE-NKLPVEFVNSVGETGL 325 (459)
Q Consensus 259 l~~~l~~~~~~~~V~vs~Gs~~~~---~--~~~~~~i~~a~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~v~ 325 (459)
+..|+...+.++.|+||+||.... . ...+..+++++..++..+|..+.... +.+. .+|+||+
T Consensus 30 ~P~Wl~~~~~RpRVcvT~G~~~~~~~g~~~~~~l~~ll~ala~ldvEvV~a~~~~~~~~lg-----~lP~nVR 97 (97)
T PF06722_consen 30 VPDWLLEPPGRPRVCVTLGTSVRMFFGPGGVPLLRRLLEALAGLDVEVVVALPAAQRAELG-----ELPDNVR 97 (97)
T ss_dssp EEGGGSSSTSSEEEEEEETHHHCHHHSCHHHCHHHHHHHHHHTSSSEEEEEETTCCCGGCC-----S-TTTEE
T ss_pred CCcccccCCCCCEEEEEcCCCccccccccchHHHHHHHHHHhhCCcEEEEECCHHHHHhhC-----CCCCCCC
Confidence 677999989999999999998752 2 25788899999999999999988654 2221 3566664
|
Many proteins containing this domain are members of the glycosyl transferase family 28 IPR004276 from INTERPRO.; PDB: 3OTH_A 3OTG_A 3OTI_A 3D0R_A 3D0Q_B 2P6P_A 3UYK_A 3UYL_B 3TSA_B 2YJN_A. |
| >cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS) | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.22 Score=46.44 Aligned_cols=101 Identities=7% Similarity=-0.004 Sum_probs=66.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCC--CeEEEEecCccccccCC-CCceE-EEcCCCCCCCCCCCCCCHHHHHHHHHH
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASKR--VKATLATTHYTVKSIHA-TTVGV-EPISDGFDEGGFKQAPSVKAYLESFKT 84 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~G--h~V~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (459)
|||++-..+.|++.-+.++.++|+++. .+|++++.+...+.++. +.++- +.++... .....
T Consensus 1 kILii~~~~iGD~i~~~p~l~~Lk~~~P~~~I~~l~~~~~~~l~~~~p~id~v~~~~~~~------~~~~~--------- 65 (279)
T cd03789 1 RILVIRLSWIGDVVLATPLLRALKARYPDARITVLAPPWFAPLLELMPEVDRVIVLPKKH------GKLGL--------- 65 (279)
T ss_pred CEEEEecccHHHHHHHHHHHHHHHHHCCCCEEEEEEChhhHHHHhcCCccCEEEEcCCcc------cccch---------
Confidence 689999999999999999999999975 89999999998888776 34433 3332110 00011
Q ss_pred hchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEE
Q 012645 85 VGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAA 129 (459)
Q Consensus 85 ~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~ 129 (459)
..+..++.+++.. ++|+++.=........++...+++...
T Consensus 66 ---~~~~~~~~~l~~~--~~D~vi~~~~~~~~~~~~~~~~~~~~~ 105 (279)
T cd03789 66 ---GARRRLARALRRR--RYDLAIDLQGSLRSALLPFLAGAPRRI 105 (279)
T ss_pred ---HHHHHHHHHHhhc--CCCEEEECCCccHHHHHHHHhCCCeEE
Confidence 1122344444433 899998655554445566666666544
|
Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.7 Score=44.33 Aligned_cols=100 Identities=7% Similarity=-0.008 Sum_probs=68.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEecCccccccCC-CCceE-EEcCCCCCCCCCCCCCCHHHHHHHHHH
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASK--RVKATLATTHYTVKSIHA-TTVGV-EPISDGFDEGGFKQAPSVKAYLESFKT 84 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~--Gh~V~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (459)
|||++-..+.||+.=..++.++|++. +.+|++++.+.+.+.++. +.++- +.++.. . .....
T Consensus 1 rILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~p~id~v~~~~~~--~-------~~~~~------ 65 (334)
T TIGR02195 1 KILVIGPSWVGDMVMAQSLYRLLKKRYPQAVIDVLAPAWCRPLLERMPEIRQAIDMPLG--H-------GALEL------ 65 (334)
T ss_pred CEEEEccchhHHHHHHHHHHHHHHHHCCCCEEEEEechhhHHHHhcCchhceeeecCCc--c-------cchhh------
Confidence 68999999999999999999999986 899999999988887775 45533 222211 0 00000
Q ss_pred hchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceE
Q 012645 85 VGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGA 128 (459)
Q Consensus 85 ~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v 128 (459)
.....++..++.. ++|++|.-........++...|+|.-
T Consensus 66 ---~~~~~~~~~lr~~--~yD~vi~l~~~~~s~ll~~~~~~~~r 104 (334)
T TIGR02195 66 ---TERRRLGRSLREE--RYDQAIVLPNSLKSALIPFFAGIPHR 104 (334)
T ss_pred ---hHHHHHHHHHhhc--CCCEEEECCCCHHHHHHHHHcCCCce
Confidence 0112344445444 89999976555556677777788754
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.063 Score=53.67 Aligned_cols=121 Identities=17% Similarity=0.267 Sum_probs=84.1
Q ss_pred CCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCC-CCCchhhhh------hcCCCceEEeeecHHHHhcc-
Q 012645 267 PEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENE-NKLPVEFVN------SVGETGLVVRWCNQFEVLAH- 338 (459)
Q Consensus 267 ~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~-~~~~~~~~~------~~~~~v~v~~~~p~~~lL~~- 338 (459)
++..+||.+|--..+.++..++.-++.++..+-.++|....+- +. .+|.. -.+++|++.+-++..+-.++
T Consensus 756 p~d~vvf~~FNqLyKidP~~l~~W~~ILk~VPnS~LwllrfPa~ge--~rf~ty~~~~Gl~p~riifs~va~k~eHvrr~ 833 (966)
T KOG4626|consen 756 PEDAVVFCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGE--QRFRTYAEQLGLEPDRIIFSPVAAKEEHVRRG 833 (966)
T ss_pred CCCeEEEeechhhhcCCHHHHHHHHHHHHhCCcceeEEEeccccch--HHHHHHHHHhCCCccceeeccccchHHHHHhh
Confidence 3456999999888889999999999999999999999987764 11 22221 12566777666654443332
Q ss_pred ----cCccceeccCchhhHHHhhhcCCeeeccccccchh-hHHHHHHHhhhceEEeee
Q 012645 339 ----QAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQP-TNAKFVEEVWEVGVRAKK 391 (459)
Q Consensus 339 ----~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~-~na~rv~~~~G~G~~~~~ 391 (459)
-.++...+. |..|.++.|+.|||||.+|.-.--. .-+-.+..+ |+|..+.+
T Consensus 834 ~LaDv~LDTplcn-GhTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~-Gl~hliak 889 (966)
T KOG4626|consen 834 QLADVCLDTPLCN-GHTTGMDVLWAGVPMVTMPGETLASRVAASLLTAL-GLGHLIAK 889 (966)
T ss_pred hhhhhcccCcCcC-CcccchhhhccCCceeecccHHHHHHHHHHHHHHc-ccHHHHhh
Confidence 223445555 7889999999999999999754333 334455667 99985553
|
|
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.18 Score=48.15 Aligned_cols=102 Identities=12% Similarity=0.059 Sum_probs=63.4
Q ss_pred cCCCceEE---eeecHH---HHhcccCccceecc---Cch-hhHHHhhhcCCeeecccc------ccch------hhHHH
Q 012645 320 VGETGLVV---RWCNQF---EVLAHQAVGCFITH---CGW-NSILEGLSLGVAVVAVPQ------FSDQ------PTNAK 377 (459)
Q Consensus 320 ~~~~v~v~---~~~p~~---~lL~~~~~~~~I~H---GG~-gs~~eal~~GvP~li~P~------~~DQ------~~na~ 377 (459)
.+++|.+. +++++. .+++.+++ ||.- =|+ .+++||+++|+|+|..-. ..|+ .+++.
T Consensus 199 l~~~V~f~g~~G~~~~~dl~~~y~~aDi--fV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~ 276 (335)
T PHA01633 199 VPANVHFVAEFGHNSREYIFAFYGAMDF--TIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVE 276 (335)
T ss_pred CCCcEEEEecCCCCCHHHHHHHHHhCCE--EEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHH
Confidence 45788887 445543 67877777 7763 344 578899999999988633 2332 33333
Q ss_pred HHH--HhhhceEEeeecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHH
Q 012645 378 FVE--EVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFA 429 (459)
Q Consensus 378 rv~--~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~ 429 (459)
... .. |.|..++ ..+++++.+++.+++...+.+...+++++.++++
T Consensus 277 ~~~~~~~-g~g~~~~-----~~d~~~la~ai~~~~~~~~~~~~~~~~~~~a~~f 324 (335)
T PHA01633 277 EYYDKEH-GQKWKIH-----KFQIEDMANAIILAFELQDREERSMKLKELAKKY 324 (335)
T ss_pred HhcCccc-Cceeeec-----CCCHHHHHHHHHHHHhccChhhhhHHHHHHHHhc
Confidence 333 34 5555544 6899999999999965432223334444444443
|
|
| >PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.035 Score=48.49 Aligned_cols=114 Identities=13% Similarity=0.119 Sum_probs=64.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCC-----CCceEEEcCCCCCC---CCCCCCCCHHHHH
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHA-----TTVGVEPISDGFDE---GGFKQAPSVKAYL 79 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~---~~~~~~~~~~~~~ 79 (459)
||||+.---+. +.--+..|+++|.+.||+|+++.+...++-... ..++.......... ...........-.
T Consensus 1 M~ILlTNDDGi-~a~Gi~aL~~~L~~~g~~V~VvAP~~~~Sg~g~sit~~~pl~~~~~~~~~~~~~~~~~~v~GTPaDcv 79 (196)
T PF01975_consen 1 MRILLTNDDGI-DAPGIRALAKALSALGHDVVVVAPDSEQSGTGHSITLHKPLRVTEVEPGHDPGGVEAYAVSGTPADCV 79 (196)
T ss_dssp SEEEEE-SS-T-TSHHHHHHHHHHTTTSSEEEEEEESSSTTTSTTS--SSSEEEEEEEE-TTCCSTTEEEEESS-HHHHH
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhcCCeEEEEeCCCCCcCcceeecCCCCeEEEEEEecccCCCCCEEEEcCcHHHHH
Confidence 78988887666 566688999999888899999999988765543 13333222110000 0001112222111
Q ss_pred HHHHHhchHHHHHHHHHhhcCCCCccEEEeCC----------Cc---hhHHHHHHHcCCceEEEccch
Q 012645 80 ESFKTVGSRTLAEVILKYKDSESPVNCIVYDS----------LL---TWALDVARQFGIYGAAMMTNS 134 (459)
Q Consensus 80 ~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~----------~~---~~~~~~a~~lgiP~v~~~~~~ 134 (459)
.-.+..++.+ .+|||||+.. ++ .+|+.-|...|||.|.+|...
T Consensus 80 -------~~al~~~~~~-----~~pDLViSGiN~G~N~g~~v~~SGTVgAA~ea~~~GipaIA~S~~~ 135 (196)
T PF01975_consen 80 -------KLALDGLLPD-----KKPDLVISGINHGANLGTDVLYSGTVGAAMEAALRGIPAIAVSLDS 135 (196)
T ss_dssp -------HHHHHCTSTT-----SS-SEEEEEEEES---GGGGGG-HHHHHHHHHHHTTSEEEEEEEES
T ss_pred -------HHHHHhhhcc-----CCCCEEEECCCCCccCCcCcccccHHHHHHHHHHcCCCeEEEeccc
Confidence 1122222221 1599999642 33 335666778899999998754
|
This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A .... |
| >COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=95.88 E-value=1.1 Score=43.12 Aligned_cols=104 Identities=13% Similarity=0.109 Sum_probs=72.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCC--CeEEEEecCccccccCC-CCceEEEcCCCCCCCCCCCCCCHHHHHHHHH
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASKR--VKATLATTHYTVKSIHA-TTVGVEPISDGFDEGGFKQAPSVKAYLESFK 83 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~G--h~V~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (459)
.|||+++-....||+.=..++-+.|+++. .++++++.+.+.+.++. +.++-+..-.. . . ..
T Consensus 1 ~~kIliir~~~iGD~vlt~p~~~~lk~~~P~a~i~~~~~~~~~~i~~~~p~I~~vi~~~~--~----~-~~--------- 64 (334)
T COG0859 1 MMKILVIRLSKLGDVVLTLPLLRTLKKAYPNAKIDVLVPKGFAPILKLNPEIDKVIIIDK--K----K-KG--------- 64 (334)
T ss_pred CceEEEEeccchhHHHhHHHHHHHHHHHCCCCEEEEEeccchHHHHhcChHhhhhccccc--c----c-cc---------
Confidence 38999999999999999999999999975 99999999999988776 34433322110 0 0 00
Q ss_pred HhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEE
Q 012645 84 TVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAA 129 (459)
Q Consensus 84 ~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~ 129 (459)
........+.+.++.. ++|+||.=.-..-...++...++|.-.
T Consensus 65 -~~~~~~~~l~~~lr~~--~yD~vidl~~~~ksa~l~~~~~~~~r~ 107 (334)
T COG0859 65 -LGLKERLALLRTLRKE--RYDAVIDLQGLLKSALLALLLGIPFRI 107 (334)
T ss_pred -cchHHHHHHHHHhhcc--CCCEEEECcccHHHHHHHHHhCCCccc
Confidence 1112233444555444 799999776666677777777887655
|
|
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.17 Score=51.32 Aligned_cols=131 Identities=14% Similarity=0.051 Sum_probs=75.3
Q ss_pred CcEEEEEeCCcccC-CHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhh---hhcCCCceEEeeecHH---HHhcccCc
Q 012645 269 KSVIYVSFGSMADI-AANQVDEIARGLKASEKPFLWVVKENENKLPVEFV---NSVGETGLVVRWCNQF---EVLAHQAV 341 (459)
Q Consensus 269 ~~~V~vs~Gs~~~~-~~~~~~~i~~a~~~~~~~~v~~~~~~~~~~~~~~~---~~~~~~v~v~~~~p~~---~lL~~~~~ 341 (459)
+.++++..|..... ..+.+...+..+...+.+++++..+. ....+.+. .+.+++|.+...++.. .+++.+|+
T Consensus 306 ~~~~i~~vgRl~~~KG~d~li~a~~~l~~~~~~lvivG~G~-~~~~~~l~~l~~~~~~~V~~~g~~~~~~~~~~~a~aDi 384 (489)
T PRK14098 306 ETPLVGVIINFDDFQGAELLAESLEKLVELDIQLVICGSGD-KEYEKRFQDFAEEHPEQVSVQTEFTDAFFHLAIAGLDM 384 (489)
T ss_pred CCCEEEEeccccccCcHHHHHHHHHHHHhcCcEEEEEeCCC-HHHHHHHHHHHHHCCCCEEEEEecCHHHHHHHHHhCCE
Confidence 34666777776542 23333333333333455665554321 11112222 2346788888888764 57877777
Q ss_pred cceeccC---ch-hhHHHhhhcCCeeecccccc--chhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHh
Q 012645 342 GCFITHC---GW-NSILEGLSLGVAVVAVPQFS--DQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVM 410 (459)
Q Consensus 342 ~~~I~HG---G~-gs~~eal~~GvP~li~P~~~--DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll 410 (459)
++.-. |. .+.+||+++|+|.|+....+ |...+ ..+.. +-|...+ ..+++.+.++|.+++
T Consensus 385 --~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~--~~~~~-~~G~l~~-----~~d~~~la~ai~~~l 449 (489)
T PRK14098 385 --LLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEE--VSEDK-GSGFIFH-----DYTPEALVAKLGEAL 449 (489)
T ss_pred --EEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeec--CCCCC-CceeEeC-----CCCHHHHHHHHHHHH
Confidence 77543 32 36789999999888776432 22111 01124 5566665 567899999999876
|
|
| >PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.17 Score=42.97 Aligned_cols=96 Identities=9% Similarity=-0.052 Sum_probs=58.2
Q ss_pred hCCCeEEEEecCccccccCCCCceEEEcCCCCCCCCCCCCCCHHHHHHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCC
Q 012645 33 SKRVKATLATTHYTVKSIHATTVGVEPISDGFDEGGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSL 112 (459)
Q Consensus 33 ~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~ 112 (459)
++||+|+|++........ +|+..+.+... ........-....++..... -+.+.+.+.+|++.+-.||+||....
T Consensus 1 q~gh~v~fl~~~~~~~~~--~GV~~~~y~~~--~~~~~~~~~~~~~~e~~~~r-g~av~~a~~~L~~~Gf~PDvI~~H~G 75 (171)
T PF12000_consen 1 QRGHEVVFLTERKRPPIP--PGVRVVRYRPP--RGPTPGTHPYVRDFEAAVLR-GQAVARAARQLRAQGFVPDVIIAHPG 75 (171)
T ss_pred CCCCEEEEEecCCCCCCC--CCcEEEEeCCC--CCCCCCCCcccccHHHHHHH-HHHHHHHHHHHHHcCCCCCEEEEcCC
Confidence 589999999965544433 69988888531 11111111111111111111 12344555666666668999999977
Q ss_pred chhHHHHHHHc-CCceEEEccc
Q 012645 113 LTWALDVARQF-GIYGAAMMTN 133 (459)
Q Consensus 113 ~~~~~~~a~~l-giP~v~~~~~ 133 (459)
.-.+..+-+.+ ++|.+.+.-.
T Consensus 76 WGe~Lflkdv~P~a~li~Y~E~ 97 (171)
T PF12000_consen 76 WGETLFLKDVFPDAPLIGYFEF 97 (171)
T ss_pred cchhhhHHHhCCCCcEEEEEEE
Confidence 66677788888 9999987654
|
This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important. |
| >COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.19 Score=50.12 Aligned_cols=130 Identities=14% Similarity=0.154 Sum_probs=87.5
Q ss_pred CCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCC-CCCchhhhhh------cCCCceEEeeecHH---HHh
Q 012645 267 PEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENE-NKLPVEFVNS------VGETGLVVRWCNQF---EVL 336 (459)
Q Consensus 267 ~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~-~~~~~~~~~~------~~~~v~v~~~~p~~---~lL 336 (459)
++..+||+||+...+..++.+..=.+.++..+-.++|..+.+. ...-..+++. -.++.++.+-.|.. +=+
T Consensus 427 p~~avVf~c~~n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~~~~~~~l~~la~~~Gv~~eRL~f~p~~~~~~h~a~~ 506 (620)
T COG3914 427 PEDAVVFCCFNNYFKITPEVFALWMQILSAVPNSVLLLKAGGDDAEINARLRDLAEREGVDSERLRFLPPAPNEDHRARY 506 (620)
T ss_pred CCCeEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEecCCCcHHHHHHHHHHHHHcCCChhheeecCCCCCHHHHHhh
Confidence 4566999999999999999999988888888888999887743 1111122211 13566666665544 444
Q ss_pred cccCcccee---ccCchhhHHHhhhcCCeeeccccccchhh--HHHH-HHHhhhceEEeeecCCCcccHHHHHHHH
Q 012645 337 AHQAVGCFI---THCGWNSILEGLSLGVAVVAVPQFSDQPT--NAKF-VEEVWEVGVRAKKNRAGIVTGEELNKCV 406 (459)
Q Consensus 337 ~~~~~~~~I---~HGG~gs~~eal~~GvP~li~P~~~DQ~~--na~r-v~~~~G~G~~~~~~~~~~~~~~~l~~~i 406 (459)
..+|+ |. --||..|..|+|+.|||+|..+ ++|+- |+.- +..+ |+-..+-. -.++-++.++
T Consensus 507 ~iADl--vLDTyPY~g~TTa~daLwm~vPVlT~~--G~~FasR~~~si~~~a-gi~e~vA~-----s~~dYV~~av 572 (620)
T COG3914 507 GIADL--VLDTYPYGGHTTASDALWMGVPVLTRV--GEQFASRNGASIATNA-GIPELVAD-----SRADYVEKAV 572 (620)
T ss_pred chhhe--eeecccCCCccchHHHHHhcCceeeec--cHHHHHhhhHHHHHhc-CCchhhcC-----CHHHHHHHHH
Confidence 45666 65 3699999999999999999876 55553 3333 3444 76666652 3445555555
|
|
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=95.08 E-value=0.22 Score=37.47 Aligned_cols=83 Identities=17% Similarity=0.219 Sum_probs=51.7
Q ss_pred cCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHH
Q 012645 347 HCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWR 426 (459)
Q Consensus 347 HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~ 426 (459)
+|-..-+.|++++|+|+|.-.. . .+...+.-|...... . +.+++.+++..+++|++ ..++-+++-.
T Consensus 9 ~~~~~r~~E~~a~G~~vi~~~~----~----~~~~~~~~~~~~~~~---~-~~~el~~~i~~ll~~~~--~~~~ia~~a~ 74 (92)
T PF13524_consen 9 DGPNMRIFEAMACGTPVISDDS----P----GLREIFEDGEHIITY---N-DPEELAEKIEYLLENPE--ERRRIAKNAR 74 (92)
T ss_pred CCCchHHHHHHHCCCeEEECCh----H----HHHHHcCCCCeEEEE---C-CHHHHHHHHHHHHCCHH--HHHHHHHHHH
Confidence 5556789999999999988764 1 112221334333332 3 89999999999999972 2333333333
Q ss_pred HHHHHHHhcCCCcHHHHHHHH
Q 012645 427 EFAKKAVSAGGSSDKNIDEFV 447 (459)
Q Consensus 427 ~~~~~~~~~~g~s~~~~~~~~ 447 (459)
+.+ .+..+....+++|+
T Consensus 75 ~~v----~~~~t~~~~~~~il 91 (92)
T PF13524_consen 75 ERV----LKRHTWEHRAEQIL 91 (92)
T ss_pred HHH----HHhCCHHHHHHHHH
Confidence 333 33466666666665
|
|
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=95.06 E-value=0.067 Score=44.57 Aligned_cols=95 Identities=16% Similarity=0.130 Sum_probs=47.1
Q ss_pred HHHHHHHHHHhCCCeEEEEecCccccc--cCCCCceEEEcCCCCCCCCCCCCCCHHHHHHHHHHhchHHHHHHHHHhhcC
Q 012645 23 PLLQFAKRLASKRVKATLATTHYTVKS--IHATTVGVEPISDGFDEGGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDS 100 (459)
Q Consensus 23 p~~~la~~L~~~Gh~V~~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 100 (459)
-+..|+++|.++||+|++++....... ....|+.+..++...... ........ ..+..++ ...
T Consensus 6 ~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~--------~~~~~~l-~~~-- 70 (160)
T PF13579_consen 6 YVRELARALAARGHEVTVVTPQPDPEDDEEEEDGVRVHRLPLPRRPW----PLRLLRFL--------RRLRRLL-AAR-- 70 (160)
T ss_dssp HHHHHHHHHHHTT-EEEEEEE---GGG-SEEETTEEEEEE--S-SSS----GGGHCCHH--------HHHHHHC-HHC--
T ss_pred HHHHHHHHHHHCCCEEEEEecCCCCcccccccCCceEEeccCCccch----hhhhHHHH--------HHHHHHH-hhh--
Confidence 467899999999999999997655443 233588888776221110 00000111 1223333 112
Q ss_pred CCCccEEEeCCCch-hHHHHHH-HcCCceEEEcc
Q 012645 101 ESPVNCIVYDSLLT-WALDVAR-QFGIYGAAMMT 132 (459)
Q Consensus 101 ~~~~Dlvi~D~~~~-~~~~~a~-~lgiP~v~~~~ 132 (459)
..+||+|.+..... ....+++ ..++|+|....
T Consensus 71 ~~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h 104 (160)
T PF13579_consen 71 RERPDVVHAHSPTAGLVAALARRRRGIPLVVTVH 104 (160)
T ss_dssp T---SEEEEEHHHHHHHHHHHHHHHT--EEEE-S
T ss_pred ccCCeEEEecccchhHHHHHHHHccCCcEEEEEC
Confidence 23899998776432 2333444 78999998765
|
|
| >PRK13932 stationary phase survival protein SurE; Provisional | Back alignment and domain information |
|---|
Probab=94.03 E-value=1 Score=40.96 Aligned_cols=113 Identities=12% Similarity=0.060 Sum_probs=62.4
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCC-----CCceEEEcCCCCCCCCCCCCCCHHHHH
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHA-----TTVGVEPISDGFDEGGFKQAPSVKAYL 79 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (459)
-+|||||+.---+. |.--+..|+++|.+.| +|+++.+...++-... ..+.+..+...-........+....
T Consensus 3 ~~~M~ILltNDDGi-~a~Gi~aL~~~l~~~g-~V~VvAP~~~~Sg~g~ait~~~pl~~~~~~~~~~~~~y~v~GTPaD-- 78 (257)
T PRK13932 3 DKKPHILVCNDDGI-EGEGIHVLAASMKKIG-RVTVVAPAEPHSGMSHAMTLGVPLRIKEYQKNNRFFGYTVSGTPVD-- 78 (257)
T ss_pred CCCCEEEEECCCCC-CCHHHHHHHHHHHhCC-CEEEEcCCCCCCCCcccccCCCCeEEEEEccCCCceEEEEcCcHHH--
Confidence 46799887764433 2345888999998888 7999988876654433 2344443321000000011111111
Q ss_pred HHHHHhchHHHHHHHHHhhcCCCCccEEEeCC----------Cc---hhHHHHHHHcCCceEEEcc
Q 012645 80 ESFKTVGSRTLAEVILKYKDSESPVNCIVYDS----------LL---TWALDVARQFGIYGAAMMT 132 (459)
Q Consensus 80 ~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~----------~~---~~~~~~a~~lgiP~v~~~~ 132 (459)
...-.+..++. .+||+||+.. ++ .+|+.-|..+|||.|.+|.
T Consensus 79 -----CV~lal~~~~~------~~pDLVvSGIN~G~N~G~dv~ySGTVgAA~Ea~~~GiPsIA~S~ 133 (257)
T PRK13932 79 -----CIKVALSHILP------EKPDLIVSGINYGSNTATNTLYSGTVAAALEGAIQGIPSLAFSL 133 (257)
T ss_pred -----HHHHHHHhhcC------CCCCEEEECCcCCCCCCcCEecchhHHHHHHHHHcCCCeEEEEc
Confidence 11112222222 2789999643 33 3456666788999999985
|
|
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=93.89 E-value=0.39 Score=40.62 Aligned_cols=100 Identities=13% Similarity=0.005 Sum_probs=51.6
Q ss_pred CccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcCCCCCCCCCCCCCCHHHHHHHHHHhchHHHHHHHHH
Q 012645 17 AQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDEGGFKQAPSVKAYLESFKTVGSRTLAEVILK 96 (459)
Q Consensus 17 ~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 96 (459)
..|=-.-+..|+++|+++||+|+++++......... ........... ........... ...+..++++
T Consensus 11 ~GG~e~~~~~l~~~l~~~G~~v~v~~~~~~~~~~~~---~~~~~~~~~~~----~~~~~~~~~~~-----~~~~~~~i~~ 78 (177)
T PF13439_consen 11 IGGAERVVLNLARALAKRGHEVTVVSPGVKDPIEEE---LVKIFVKIPYP----IRKRFLRSFFF-----MRRLRRLIKK 78 (177)
T ss_dssp SSHHHHHHHHHHHHHHHTT-EEEEEESS-TTS-SST---EEEE---TT-S----STSS--HHHHH-----HHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHCCCEEEEEEcCCCccchhh---ccceeeeeecc----cccccchhHHH-----HHHHHHHHHH
Confidence 556666789999999999999999988755544433 11111100000 00111111111 1344555565
Q ss_pred hhcCCCCccEEEeCCCc-hhHHHHHHHcCCceEEEccch
Q 012645 97 YKDSESPVNCIVYDSLL-TWALDVARQFGIYGAAMMTNS 134 (459)
Q Consensus 97 ~~~~~~~~Dlvi~D~~~-~~~~~~a~~lgiP~v~~~~~~ 134 (459)
. ++|+|-+.... .+....+.. ++|.+...+..
T Consensus 79 ~-----~~DiVh~~~~~~~~~~~~~~~-~~~~v~~~H~~ 111 (177)
T PF13439_consen 79 E-----KPDIVHIHGPPAFWIALLACR-KVPIVYTIHGP 111 (177)
T ss_dssp H-----T-SEEECCTTHCCCHHHHHHH-CSCEEEEE-HH
T ss_pred c-----CCCeEEecccchhHHHHHhcc-CCCEEEEeCCC
Confidence 4 89999555433 223333333 99999988765
|
|
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=93.72 E-value=1.1 Score=42.86 Aligned_cols=76 Identities=14% Similarity=0.142 Sum_probs=45.2
Q ss_pred eeecHH---HHhcccCccceec---cCc-hhhHHHhhhcCCeeecccccc--chhh---HHHHHHH-----------hhh
Q 012645 328 RWCNQF---EVLAHQAVGCFIT---HCG-WNSILEGLSLGVAVVAVPQFS--DQPT---NAKFVEE-----------VWE 384 (459)
Q Consensus 328 ~~~p~~---~lL~~~~~~~~I~---HGG-~gs~~eal~~GvP~li~P~~~--DQ~~---na~rv~~-----------~~G 384 (459)
.++|+. .+++.+++ +|. ..| ..++.||+++|+|+|+.-..+ |.-. |+.-+.. . +
T Consensus 196 ~~v~~~~l~~~y~~aDv--~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~-~ 272 (331)
T PHA01630 196 TPLPDDDIYSLFAGCDI--LFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPI-H 272 (331)
T ss_pred ccCCHHHHHHHHHhCCE--EEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCc-c
Confidence 346655 46877887 652 333 458999999999999976432 3211 1111100 1 2
Q ss_pred ceEEeeecCCCcccHHHHHHHHHHHhcC
Q 012645 385 VGVRAKKNRAGIVTGEELNKCVNEVMDG 412 (459)
Q Consensus 385 ~G~~~~~~~~~~~~~~~l~~~i~~ll~~ 412 (459)
+|..++ .+.+++.+++.+++.|
T Consensus 273 ~G~~v~------~~~~~~~~~ii~~l~~ 294 (331)
T PHA01630 273 VGYFLD------PDIEDAYQKLLEALAN 294 (331)
T ss_pred cccccC------CCHHHHHHHHHHHHhC
Confidence 343332 3567788888888886
|
|
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.50 E-value=7 Score=37.08 Aligned_cols=82 Identities=17% Similarity=0.163 Sum_probs=51.2
Q ss_pred CCHHHHHHHHHH-HHh-CCCcEEEEEeCCC-CCCchhhhh-hcCCCceEEeeecHH---HHhcccCccceeccCch----
Q 012645 282 IAANQVDEIARG-LKA-SEKPFLWVVKENE-NKLPVEFVN-SVGETGLVVRWCNQF---EVLAHQAVGCFITHCGW---- 350 (459)
Q Consensus 282 ~~~~~~~~i~~a-~~~-~~~~~v~~~~~~~-~~~~~~~~~-~~~~~v~v~~~~p~~---~lL~~~~~~~~I~HGG~---- 350 (459)
...+++..++.. +.+ .+.+|++...++. ..+.+..+. .+.+++.+.+-+|++ ++|...++ |++-.=.
T Consensus 208 KGiDll~~iIp~vc~~~p~vrfii~GDGPk~i~lee~lEk~~l~~rV~~lG~v~h~~Vr~vl~~G~I--FlntSlTEafc 285 (426)
T KOG1111|consen 208 KGIDLLLEIIPSVCDKHPEVRFIIIGDGPKRIDLEEMLEKLFLQDRVVMLGTVPHDRVRDVLVRGDI--FLNTSLTEAFC 285 (426)
T ss_pred cchHHHHHHHHHHHhcCCCeeEEEecCCcccchHHHHHHHhhccCceEEecccchHHHHHHHhcCcE--EeccHHHHHHH
Confidence 345666665554 443 5567776654432 222222221 256889999999987 57777777 7765432
Q ss_pred hhHHHhhhcCCeeec
Q 012645 351 NSILEGLSLGVAVVA 365 (459)
Q Consensus 351 gs~~eal~~GvP~li 365 (459)
-++.||..+|.|++.
T Consensus 286 ~~ivEAaScGL~VVs 300 (426)
T KOG1111|consen 286 MVIVEAASCGLPVVS 300 (426)
T ss_pred HHHHHHHhCCCEEEE
Confidence 257799999999875
|
|
| >PRK02261 methylaspartate mutase subunit S; Provisional | Back alignment and domain information |
|---|
Probab=93.22 E-value=0.18 Score=41.33 Aligned_cols=57 Identities=11% Similarity=-0.013 Sum_probs=46.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccc----cccCCCCceEEEcC
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTV----KSIHATTVGVEPIS 61 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~----~~~~~~g~~~~~~~ 61 (459)
|++.||++.+.++.+|-.-..-++..|.++|++|++++...-. +.+.+.+.+++.+.
T Consensus 1 ~~~~~vl~~~~~gD~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS 61 (137)
T PRK02261 1 MKKKTVVLGVIGADCHAVGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVS 61 (137)
T ss_pred CCCCEEEEEeCCCChhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEc
Confidence 6789999999999999999999999999999999999875433 33344566666553
|
|
| >PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [] | Back alignment and domain information |
|---|
Probab=92.55 E-value=0.91 Score=38.71 Aligned_cols=112 Identities=12% Similarity=0.028 Sum_probs=62.9
Q ss_pred EEcCCCccCHHHHHHHHHHH-Hh-CCCeEEEEecCcccccc-----CCC---CceEEEcCCCCCCCCCCCCCCHHHHHHH
Q 012645 12 VLTYPAQGHINPLLQFAKRL-AS-KRVKATLATTHYTVKSI-----HAT---TVGVEPISDGFDEGGFKQAPSVKAYLES 81 (459)
Q Consensus 12 ~~~~~~~GH~~p~~~la~~L-~~-~Gh~V~~~~~~~~~~~~-----~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (459)
++-.++.||..-++.|.+.+ .+ ..++..+++..+..+.. ++. ...+..+|..... .+........
T Consensus 2 l~v~gsGGHt~eml~L~~~~~~~~~~~~~~ivt~~d~~S~~k~~~~~~~~~~~~~~~~~~r~r~v-----~q~~~~~~~~ 76 (170)
T PF08660_consen 2 LVVLGSGGHTAEMLRLLKALDNDRYQPRTYIVTEGDKQSRSKAEQLEKSSSKRHKILEIPRAREV-----GQSYLTSIFT 76 (170)
T ss_pred EEEEcCcHHHHHHHHHHHHhhhhcCCCcEEEEEcCCcccHHHHHHHHHhccccceeeccceEEEe-----chhhHhhHHH
Confidence 34458899999999999999 33 35666667665544332 111 1134444321111 1111111122
Q ss_pred HHHhchHHHHHHHHHhhcCCCCccEEEeCCCch--hHHHHHHHc------CCceEEEccch
Q 012645 82 FKTVGSRTLAEVILKYKDSESPVNCIVYDSLLT--WALDVARQF------GIYGAAMMTNS 134 (459)
Q Consensus 82 ~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~--~~~~~a~~l------giP~v~~~~~~ 134 (459)
........+.-+.+. +||+||+..-.. ....+|+.+ |.+.|.+.+..
T Consensus 77 ~l~~~~~~~~il~r~------rPdvii~nGpg~~vp~~~~~~l~~~~~~~~~kiIyIES~a 131 (170)
T PF08660_consen 77 TLRAFLQSLRILRRE------RPDVIISNGPGTCVPVCLAAKLLRLLGLRGSKIIYIESFA 131 (170)
T ss_pred HHHHHHHHHHHHHHh------CCCEEEEcCCceeeHHHHHHHHHHHhhccCCcEEEEEeee
Confidence 222222233333332 899999887654 467788888 99999987643
|
|
| >PRK13933 stationary phase survival protein SurE; Provisional | Back alignment and domain information |
|---|
Probab=92.26 E-value=2.2 Score=38.83 Aligned_cols=41 Identities=7% Similarity=0.092 Sum_probs=29.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCcccccc
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSI 50 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~ 50 (459)
||||+.---+. |.--+..|+++|++ +|+|+++.+...++-.
T Consensus 1 M~ILvtNDDGi-~apGl~aL~~~l~~-~~~V~VvAP~~~~Sg~ 41 (253)
T PRK13933 1 MNILLTNDDGI-NAEGINTLAELLSK-YHEVIIVAPENQRSAS 41 (253)
T ss_pred CeEEEEcCCCC-CChhHHHHHHHHHh-CCcEEEEccCCCCccc
Confidence 67777764443 33348889999964 6899999988776643
|
|
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=92.23 E-value=0.85 Score=41.73 Aligned_cols=91 Identities=18% Similarity=0.168 Sum_probs=54.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCcccc-ccCCCC-ceEEEcCCCCCCCCCCCCCCHHHHHHHHHHh
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVK-SIHATT-VGVEPISDGFDEGGFKQAPSVKAYLESFKTV 85 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~-~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (459)
|||+++.. +|. -..|++.|.++||+|+..+...... .+...| ...+ .. .++
T Consensus 1 m~ILvlGG--T~e---gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~g~~~v~-~g-~l~-------------------- 53 (256)
T TIGR00715 1 MTVLLMGG--TVD---SRAIAKGLIAQGIEILVTVTTSEGKHLYPIHQALTVH-TG-ALD-------------------- 53 (256)
T ss_pred CeEEEEec--hHH---HHHHHHHHHhCCCeEEEEEccCCccccccccCCceEE-EC-CCC--------------------
Confidence 57777653 332 4678999999999999887765443 333332 2221 10 000
Q ss_pred chHHHHHHHHHhhcCCCCccEEEeCCCchh------HHHHHHHcCCceEEEc
Q 012645 86 GSRTLAEVILKYKDSESPVNCIVYDSLLTW------ALDVARQFGIYGAAMM 131 (459)
Q Consensus 86 ~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~------~~~~a~~lgiP~v~~~ 131 (459)
...+.+++.+- ++|+||--.+.++ +..+|+++|||++++.
T Consensus 54 -~~~l~~~l~~~-----~i~~VIDAtHPfA~~is~~a~~a~~~~~ipylR~e 99 (256)
T TIGR00715 54 -PQELREFLKRH-----SIDILVDATHPFAAQITTNATAVCKELGIPYVRFE 99 (256)
T ss_pred -HHHHHHHHHhc-----CCCEEEEcCCHHHHHHHHHHHHHHHHhCCcEEEEE
Confidence 11233444442 7898774433332 4578999999999974
|
This enzyme was found to be a monomer by gel filtration. |
| >COG0496 SurE Predicted acid phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.71 E-value=0.85 Score=41.14 Aligned_cols=109 Identities=14% Similarity=0.125 Sum_probs=62.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCC-----CceEEEcCCCCCCCCCCCCCCHHHHHHHH
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHAT-----TVGVEPISDGFDEGGFKQAPSVKAYLESF 82 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~-----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (459)
||||+.---+ =|.--+..|+++|. .+++|+++.+...++-+... .+....+.. ......+. -
T Consensus 1 mrILlTNDDG-i~a~Gi~aL~~al~-~~~dV~VVAP~~~qSg~s~slTl~~Plr~~~~~~----~~~av~GT-------P 67 (252)
T COG0496 1 MRILLTNDDG-IHAPGIRALARALR-EGADVTVVAPDREQSGASHSLTLHEPLRVRQVDN----GAYAVNGT-------P 67 (252)
T ss_pred CeEEEecCCc-cCCHHHHHHHHHHh-hCCCEEEEccCCCCcccccccccccCceeeEecc----ceEEecCC-------h
Confidence 6777665433 35556788899998 99999999999887755431 222222211 00000011 1
Q ss_pred HHhchHHHHHHHHHhhcCCCCccEEEeCC----------Cc---hhHHHHHHHcCCceEEEccch
Q 012645 83 KTVGSRTLAEVILKYKDSESPVNCIVYDS----------LL---TWALDVARQFGIYGAAMMTNS 134 (459)
Q Consensus 83 ~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~----------~~---~~~~~~a~~lgiP~v~~~~~~ 134 (459)
.+...-.+..++++. .||+||+.. .+ .+|++=|..+|||.|.+|...
T Consensus 68 aDCV~lal~~l~~~~-----~pDLVvSGIN~G~Nlg~dv~ySGTVaaA~Ea~~~GipsIA~S~~~ 127 (252)
T COG0496 68 ADCVILGLNELLKEP-----RPDLVVSGINAGANLGDDVIYSGTVAAAMEAALLGIPAIAISLAY 127 (252)
T ss_pred HHHHHHHHHHhccCC-----CCCEEEeCccCCCccccceeeeehHHHHHHHHHcCccceeeeehh
Confidence 112222334444332 589998643 22 335555668899999998754
|
|
| >PRK13935 stationary phase survival protein SurE; Provisional | Back alignment and domain information |
|---|
Probab=91.67 E-value=2.7 Score=38.18 Aligned_cols=42 Identities=10% Similarity=0.110 Sum_probs=30.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccC
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIH 51 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~ 51 (459)
||||+.---+. |.--+.+|+++|++ +|+|+++.+...++-..
T Consensus 1 M~ILlTNDDGi-~a~Gi~aL~~~l~~-~~~V~VvAP~~~qSg~g 42 (253)
T PRK13935 1 MNILVTNDDGI-TSPGIIILAEYLSE-KHEVFVVAPDKERSATG 42 (253)
T ss_pred CeEEEECCCCC-CCHHHHHHHHHHHh-CCcEEEEccCCCCcccc
Confidence 67777765444 34458889999964 68999999987765443
|
|
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=91.58 E-value=1.6 Score=43.79 Aligned_cols=103 Identities=9% Similarity=0.036 Sum_probs=68.8
Q ss_pred eeecHH---HHhcccCccceec---cCch-hhHHHhhhcCCe----eeccccccchhhHHHHHHHhhhceEEeeecCCCc
Q 012645 328 RWCNQF---EVLAHQAVGCFIT---HCGW-NSILEGLSLGVA----VVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGI 396 (459)
Q Consensus 328 ~~~p~~---~lL~~~~~~~~I~---HGG~-gs~~eal~~GvP----~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~ 396 (459)
..+|+. ++++.+|+ +|. +=|. .+..||+++|+| +|+--+.+- +. .+ +-|..++ .
T Consensus 342 ~~~~~~el~aly~aaDv--~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~----~~---~l-~~gllVn-----P 406 (456)
T TIGR02400 342 RSYDREELMALYRAADV--GLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGA----AQ---EL-NGALLVN-----P 406 (456)
T ss_pred CCCCHHHHHHHHHhCcE--EEECccccccCccHHHHHHhcCCCCceEEEeCCCCC----hH---Hh-CCcEEEC-----C
Confidence 455665 45777777 775 4465 478899999999 665554432 11 22 3355555 5
Q ss_pred ccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012645 397 VTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLL 451 (459)
Q Consensus 397 ~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~ 451 (459)
.+.+.++++|.++|+.+. ++-+++.+++.+.+.. .+...-+++++++|.
T Consensus 407 ~d~~~lA~aI~~aL~~~~-~er~~r~~~~~~~v~~-----~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 407 YDIDGMADAIARALTMPL-EEREERHRAMMDKLRK-----NDVQRWREDFLSDLN 455 (456)
T ss_pred CCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHhh-----CCHHHHHHHHHHHhh
Confidence 689999999999998642 2556666666666553 677777888887763
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=91.51 E-value=2.6 Score=42.98 Aligned_cols=92 Identities=16% Similarity=0.134 Sum_probs=62.4
Q ss_pred CCceEEeeec--HH-HHhcccCccceeccC---chhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCC
Q 012645 322 ETGLVVRWCN--QF-EVLAHQAVGCFITHC---GWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAG 395 (459)
Q Consensus 322 ~~v~v~~~~p--~~-~lL~~~~~~~~I~HG---G~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~ 395 (459)
.+|.+.++.. +. .++..+.+ +|.=+ |.+|..||+.+|+|+| .......|+.. .=|..+
T Consensus 409 ~~v~f~gy~~e~dl~~~~~~arl--~id~s~~eg~~~~ieAiS~GiPqI-------nyg~~~~V~d~-~NG~li------ 472 (519)
T TIGR03713 409 ERIAFTTLTNEEDLISALDKLRL--IIDLSKEPDLYTQISGISAGIPQI-------NKVETDYVEHN-KNGYII------ 472 (519)
T ss_pred cEEEEEecCCHHHHHHHHhhheE--EEECCCCCChHHHHHHHHcCCCee-------ecCCceeeEcC-CCcEEe------
Confidence 5677778777 44 67866666 88765 7789999999999999 22222233333 334333
Q ss_pred cccHHHHHHHHHHHhcCh-hhHHHHHHHHHHHHHHH
Q 012645 396 IVTGEELNKCVNEVMDGE-RSQKIKRNVSKWREFAK 430 (459)
Q Consensus 396 ~~~~~~l~~~i~~ll~~~-~~~~~~~~a~~l~~~~~ 430 (459)
-+..+|.+++..+|.+. ++..+...+-+.++...
T Consensus 473 -~d~~~l~~al~~~L~~~~~wn~~~~~sy~~~~~yS 507 (519)
T TIGR03713 473 -DDISELLKALDYYLDNLKNWNYSLAYSIKLIDDYS 507 (519)
T ss_pred -CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhh
Confidence 25788999999999997 34556666666555544
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >COG0003 ArsA Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Probab=91.51 E-value=2.2 Score=40.42 Aligned_cols=40 Identities=20% Similarity=0.140 Sum_probs=34.0
Q ss_pred cEEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEecCccc
Q 012645 8 VHVLVLTY-PAQGHINPLLQFAKRLASKRVKATLATTHYTV 47 (459)
Q Consensus 8 ~kil~~~~-~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~ 47 (459)
+||+|++. |+-|-..=..++|-.|++.|.+|.+++++...
T Consensus 2 ~riv~f~GKGGVGKTT~aaA~A~~lA~~g~kvLlvStDPAh 42 (322)
T COG0003 2 TRIVFFTGKGGVGKTTIAAATAVKLAESGKKVLLVSTDPAH 42 (322)
T ss_pred cEEEEEecCCcccHHHHHHHHHHHHHHcCCcEEEEEeCCCC
Confidence 68888887 89999888999999999999988888776433
|
|
| >TIGR00087 surE 5'/3'-nucleotidase SurE | Back alignment and domain information |
|---|
Probab=91.45 E-value=3.2 Score=37.67 Aligned_cols=110 Identities=9% Similarity=-0.000 Sum_probs=60.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCC-----CCceEEEcCCCCCCCCCCCCCCHHHHHHHH
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHA-----TTVGVEPISDGFDEGGFKQAPSVKAYLESF 82 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (459)
||||+.---+ =|.--+..|+++|++.| +|+++.+...++-... ..+.+..++..-........+....
T Consensus 1 M~ILltNDDG-i~a~Gi~aL~~~l~~~g-~V~VvAP~~~~Sg~g~ait~~~pl~~~~~~~~~~~~~~~v~GTPaD----- 73 (244)
T TIGR00087 1 MKILLTNDDG-IHSPGIRALYQALKELG-EVTVVAPARQRSGTGHSLTLFEPLRVGQVKVKNGAHIYAVDGTPTD----- 73 (244)
T ss_pred CeEEEECCCC-CCCHhHHHHHHHHHhCC-CEEEEeCCCCccccccCcCCCCCeEEEEeccCCCccEEEEcCcHHH-----
Confidence 6777655333 23345788999999888 8999999877765544 2444444431000000001111111
Q ss_pred HHhchHHHHHHHHHhhcCCCCccEEEeCC----------Cc---hhHHHHHHHcCCceEEEcc
Q 012645 83 KTVGSRTLAEVILKYKDSESPVNCIVYDS----------LL---TWALDVARQFGIYGAAMMT 132 (459)
Q Consensus 83 ~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~----------~~---~~~~~~a~~lgiP~v~~~~ 132 (459)
...-.+..++. .+|||||+.. ++ .+|+.-|...|||.+.+|.
T Consensus 74 --cv~~gl~~l~~------~~pDLVvSGiN~G~N~g~~v~ySGTVgAA~ea~~~GipaiA~S~ 128 (244)
T TIGR00087 74 --CVILGINELMP------EVPDLVISGINAGENLGTDVTYSGTVGAAMEAAIHGVPAIAISL 128 (244)
T ss_pred --HHHHHHHHhcc------CCCCeEEeccccCCCCCccEecchhHHHHHHHHHcCCCeEEEEe
Confidence 11112222322 2689998643 22 3456667788999999985
|
E. coli SurE is Recommended cutoffs are 15 for homology, 40 for probable orthology, and 200 for orthology with full-length homology. |
| >cd02067 B12-binding B12 binding domain (B12-BD) | Back alignment and domain information |
|---|
Probab=90.79 E-value=2.1 Score=33.92 Aligned_cols=36 Identities=17% Similarity=0.079 Sum_probs=33.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
||++.+.++..|.....-++..|.++|++|+++...
T Consensus 1 ~vl~~~~~~e~H~lG~~~~~~~l~~~G~~V~~lg~~ 36 (119)
T cd02067 1 KVVIATVGGDGHDIGKNIVARALRDAGFEVIDLGVD 36 (119)
T ss_pred CEEEEeeCCchhhHHHHHHHHHHHHCCCEEEECCCC
Confidence 589999999999999999999999999999888754
|
This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins. |
| >PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
Probab=90.37 E-value=5.2 Score=37.84 Aligned_cols=121 Identities=12% Similarity=0.048 Sum_probs=66.8
Q ss_pred CCcEEEEEeCCcc---cCCHHH----HHHHHHHHHhCCCcEEEEEeCCC-CCCchhhhhhcC--CCceEEe---eecHHH
Q 012645 268 EKSVIYVSFGSMA---DIAANQ----VDEIARGLKASEKPFLWVVKENE-NKLPVEFVNSVG--ETGLVVR---WCNQFE 334 (459)
Q Consensus 268 ~~~~V~vs~Gs~~---~~~~~~----~~~i~~a~~~~~~~~v~~~~~~~-~~~~~~~~~~~~--~~v~v~~---~~p~~~ 334 (459)
+++.|-|-.|.-. ..+.+. ...+.+.++.-+..+.+..+... ......+.+... +.+.+.+ .=|+..
T Consensus 145 ~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~~~~~vttSRRTp~~~~~~L~~~~~~~~~~~~~~~~~~nPy~~ 224 (311)
T PF06258_consen 145 PRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYGGSLLVTTSRRTPPEAEAALRELLKDNPGVYIWDGTGENPYLG 224 (311)
T ss_pred CCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCCCeEEEEcCCCCcHHHHHHHHHhhcCCCceEEecCCCCCcHHH
Confidence 3455555555432 244443 33344445555555555555432 111122222222 3333332 227888
Q ss_pred HhcccCccceeccCchhhHHHhhhcCCeeeccccccchhh----HHHHHHHhhhceEEeee
Q 012645 335 VLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPT----NAKFVEEVWEVGVRAKK 391 (459)
Q Consensus 335 lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~----na~rv~~~~G~G~~~~~ 391 (459)
.|+.++. .+||---.+++.||+..|+|+.+++.-. +.. -...+++. |+-..+..
T Consensus 225 ~La~ad~-i~VT~DSvSMvsEA~~tG~pV~v~~l~~-~~~r~~r~~~~L~~~-g~~r~~~~ 282 (311)
T PF06258_consen 225 FLAAADA-IVVTEDSVSMVSEAAATGKPVYVLPLPG-RSGRFRRFHQSLEER-GAVRPFTG 282 (311)
T ss_pred HHHhCCE-EEEcCccHHHHHHHHHcCCCEEEecCCC-cchHHHHHHHHHHHC-CCEEECCC
Confidence 8977776 3555555689999999999999999876 322 34455666 66555554
|
The function of this family is unknown. |
| >COG4370 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=90.23 E-value=0.99 Score=41.47 Aligned_cols=91 Identities=11% Similarity=0.138 Sum_probs=60.1
Q ss_pred CCceEE-eeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhh--HHHHHHHhhhceEEeeecCCCccc
Q 012645 322 ETGLVV-RWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPT--NAKFVEEVWEVGVRAKKNRAGIVT 398 (459)
Q Consensus 322 ~~v~v~-~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~--na~rv~~~~G~G~~~~~~~~~~~~ 398 (459)
+|..+. .|-.+.++|.++++ .|--.| ..+-+++-.|||+|.+|-.+-|+. .|.|-.++||+...+-. -.
T Consensus 294 dnc~l~lsqqsfadiLH~ada--algmAG-TAtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~-----~~ 365 (412)
T COG4370 294 DNCSLWLSQQSFADILHAADA--ALGMAG-TATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVR-----PE 365 (412)
T ss_pred CceEEEEeHHHHHHHHHHHHH--HHHhcc-chHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecC-----Cc
Confidence 454443 66666677766666 443332 233457889999999999998865 67777777777766653 34
Q ss_pred HHHHHHHHHHHhcChhhHHHHHHHH
Q 012645 399 GEELNKCVNEVMDGERSQKIKRNVS 423 (459)
Q Consensus 399 ~~~l~~~i~~ll~~~~~~~~~~~a~ 423 (459)
+..-..+.++++.|+ ++-++++
T Consensus 366 aq~a~~~~q~ll~dp---~r~~air 387 (412)
T COG4370 366 AQAAAQAVQELLGDP---QRLTAIR 387 (412)
T ss_pred hhhHHHHHHHHhcCh---HHHHHHH
Confidence 444445555699999 7776666
|
|
| >PRK00346 surE 5'(3')-nucleotidase/polyphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.06 E-value=4.8 Score=36.60 Aligned_cols=106 Identities=14% Similarity=0.117 Sum_probs=60.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCC-----CCceEEEcCCCCCCCCCCCCCCHHHHHHHH
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHA-----TTVGVEPISDGFDEGGFKQAPSVKAYLESF 82 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (459)
||||+.---+. |.--+..|+++|.+. |+|+++.+...++-... ..+.+..+... .....+....
T Consensus 1 M~ILlTNDDGi-~a~Gi~aL~~~l~~~-~~V~VvAP~~~qSg~g~ait~~~pl~~~~~~~~----~~~v~GTPaD----- 69 (250)
T PRK00346 1 MRILLTNDDGI-HAPGIRALAEALREL-ADVTVVAPDRERSGASHSLTLTRPLRVEKVDNG----FYAVDGTPTD----- 69 (250)
T ss_pred CeEEEECCCCC-CChhHHHHHHHHHhC-CCEEEEeCCCCCcCCcccccCCCCeEEEEecCC----eEEECCcHHH-----
Confidence 67777664443 445588899999988 79999999877765433 23444443211 0011111111
Q ss_pred HHhchHHHHHHHHHhhcCCCCccEEEeCC----------Cc---hhHHHHHHHcCCceEEEcc
Q 012645 83 KTVGSRTLAEVILKYKDSESPVNCIVYDS----------LL---TWALDVARQFGIYGAAMMT 132 (459)
Q Consensus 83 ~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~----------~~---~~~~~~a~~lgiP~v~~~~ 132 (459)
...-.+..++. .+||+||+.. ++ .+|+.-|...|||.+.+|.
T Consensus 70 --cV~~gl~~l~~------~~pDlVvSGIN~G~N~g~~v~ySGTVgAA~ea~~~GiPaiA~S~ 124 (250)
T PRK00346 70 --CVHLALNGLLD------PKPDLVVSGINHGANLGDDVLYSGTVAAAMEGALLGIPAIAVSL 124 (250)
T ss_pred --HHHHHHHhhcc------CCCCEEEeCCccCCCCCCCeeccHHHHHHHHHHhcCCCeEEEec
Confidence 11112222322 2789999643 33 3355666788999999975
|
|
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=89.47 E-value=5.7 Score=39.59 Aligned_cols=133 Identities=10% Similarity=0.152 Sum_probs=82.1
Q ss_pred cEEEEEeCCcccCCHHHHHHHHHHHHh-CCCcEEEEEeCC-CCCCchhhhhhcCCCceEE-eeec-HH-HHhcccCccce
Q 012645 270 SVIYVSFGSMADIAANQVDEIARGLKA-SEKPFLWVVKEN-ENKLPVEFVNSVGETGLVV-RWCN-QF-EVLAHQAVGCF 344 (459)
Q Consensus 270 ~~V~vs~Gs~~~~~~~~~~~i~~a~~~-~~~~~v~~~~~~-~~~~~~~~~~~~~~~v~v~-~~~p-~~-~lL~~~~~~~~ 344 (459)
..+++| +.+.++.+....++ ++..+=+...+. ...+. .+ +.. +|+.+. ++.+ .. +++..+++-+-
T Consensus 284 ~~l~~t-------~s~~I~~i~~Lv~~lPd~~f~Iga~te~s~kL~-~L-~~y-~nvvly~~~~~~~l~~ly~~~dlyLd 353 (438)
T TIGR02919 284 QALILT-------NSDQIEHLEEIVQALPDYHFHIAALTEMSSKLM-SL-DKY-DNVKLYPNITTQKIQELYQTCDIYLD 353 (438)
T ss_pred cEEEEC-------CHHHHHHHHHHHHhCCCcEEEEEecCcccHHHH-HH-Hhc-CCcEEECCcChHHHHHHHHhccEEEE
Confidence 366665 25666666666666 445555533321 01111 12 223 676666 6677 33 89999999999
Q ss_pred eccCch--hhHHHhhhcCCeeeccccccc-hhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcChhhHHHHHH
Q 012645 345 ITHCGW--NSILEGLSLGVAVVAVPQFSD-QPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRN 421 (459)
Q Consensus 345 I~HGG~--gs~~eal~~GvP~li~P~~~D-Q~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~ 421 (459)
|+||.- .++.||+.+|+|++..=...- +..... |.... .-+.+++.++|.++|+++ +.++++
T Consensus 354 in~~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~--------g~l~~-----~~~~~~m~~~i~~lL~d~--~~~~~~ 418 (438)
T TIGR02919 354 INHGNEILNAVRRAFEYNLLILGFEETAHNRDFIAS--------ENIFE-----HNEVDQLISKLKDLLNDP--NQFREL 418 (438)
T ss_pred ccccccHHHHHHHHHHcCCcEEEEecccCCcccccC--------Cceec-----CCCHHHHHHHHHHHhcCH--HHHHHH
Confidence 999765 699999999999998764321 111111 33333 456899999999999997 134444
Q ss_pred HHHHHH
Q 012645 422 VSKWRE 427 (459)
Q Consensus 422 a~~l~~ 427 (459)
..+-++
T Consensus 419 ~~~q~~ 424 (438)
T TIGR02919 419 LEQQRE 424 (438)
T ss_pred HHHHHH
Confidence 444433
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >PF02951 GSH-S_N: Prokaryotic glutathione synthetase, N-terminal domain; InterPro: IPR004215 Prokaryotic glutathione synthetase 6 | Back alignment and domain information |
|---|
Probab=89.45 E-value=0.62 Score=36.96 Aligned_cols=40 Identities=3% Similarity=-0.013 Sum_probs=28.7
Q ss_pred cEEEEEcCCCcc---CHHHHHHHHHHHHhCCCeEEEEecCccc
Q 012645 8 VHVLVLTYPAQG---HINPLLQFAKRLASKRVKATLATTHYTV 47 (459)
Q Consensus 8 ~kil~~~~~~~G---H~~p~~~la~~L~~~Gh~V~~~~~~~~~ 47 (459)
|||+|+.-|-.+ .-.-.++|+.+.++|||+|.++...+..
T Consensus 1 Mki~fvmDpi~~i~~~kDTT~alm~eAq~RGhev~~~~~~dL~ 43 (119)
T PF02951_consen 1 MKIAFVMDPIESIKPYKDTTFALMLEAQRRGHEVFYYEPGDLS 43 (119)
T ss_dssp -EEEEEES-GGG--TTT-HHHHHHHHHHHTT-EEEEE-GGGEE
T ss_pred CeEEEEeCCHHHCCCCCChHHHHHHHHHHCCCEEEEEEcCcEE
Confidence 788888877444 3456899999999999999999988654
|
3.2.3 from EC (glutathione synthase) catalyses the conversion of gamma-L-glutamyl-L-cysteine and glycine to orthophosphate and glutathione in the presence of ATP. This is the second step in glutathione biosynthesis. The enzyme is inhibited by 7,8-dihydrofolate, methotrexate and trimethoprim. This domain is the N terminus of the enzyme.; GO: 0004363 glutathione synthase activity, 0006750 glutathione biosynthetic process; PDB: 1GLV_A 1GSA_A 1GSH_A 2GLT_A. |
| >COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.42 E-value=2.7 Score=35.16 Aligned_cols=55 Identities=15% Similarity=0.164 Sum_probs=44.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcC
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPIS 61 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~ 61 (459)
.|||.+...|+-|-..-.+.++..|.+.|+.|-=+-++.-.+-=..-|++.+.+.
T Consensus 5 ~mki~ITG~PGvGKtTl~~ki~e~L~~~g~kvgGf~t~EVR~gGkR~GF~Ivdl~ 59 (179)
T COG1618 5 AMKIFITGRPGVGKTTLVLKIAEKLREKGYKVGGFITPEVREGGKRIGFKIVDLA 59 (179)
T ss_pred ceEEEEeCCCCccHHHHHHHHHHHHHhcCceeeeEEeeeeecCCeEeeeEEEEcc
Confidence 5899999999999999999999999999999876655544433333588888875
|
|
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=89.15 E-value=1.7 Score=43.85 Aligned_cols=100 Identities=11% Similarity=0.104 Sum_probs=61.6
Q ss_pred eeecHH---HHhcccCccceec---cCchh-hHHHhhhcCCe----eecccccc--chhhHHHHHHHhhhceEEeeecCC
Q 012645 328 RWCNQF---EVLAHQAVGCFIT---HCGWN-SILEGLSLGVA----VVAVPQFS--DQPTNAKFVEEVWEVGVRAKKNRA 394 (459)
Q Consensus 328 ~~~p~~---~lL~~~~~~~~I~---HGG~g-s~~eal~~GvP----~li~P~~~--DQ~~na~rv~~~~G~G~~~~~~~~ 394 (459)
+++++. ++++.+++ +|. +-|+| ++.||+++|+| +|+.-..+ ++ . .-|..++
T Consensus 347 g~v~~~el~~~y~~aDv--~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~---------~-~~g~lv~---- 410 (460)
T cd03788 347 RSLPREELAALYRAADV--ALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE---------L-SGALLVN---- 410 (460)
T ss_pred CCCCHHHHHHHHHhccE--EEeCccccccCcccceeEEEecCCCceEEEeccccchhh---------c-CCCEEEC----
Confidence 566766 45777777 663 45654 77899999999 44432221 22 2 3355555
Q ss_pred CcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Q 012645 395 GIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRL 450 (459)
Q Consensus 395 ~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l 450 (459)
..+.+.+.++|.++++++. ++-+++.++..+.+.+ .+...-++.++++|
T Consensus 411 -p~d~~~la~ai~~~l~~~~-~e~~~~~~~~~~~v~~-----~~~~~w~~~~l~~l 459 (460)
T cd03788 411 -PYDIDEVADAIHRALTMPL-EERRERHRKLREYVRT-----HDVQAWANSFLDDL 459 (460)
T ss_pred -CCCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHh-----CCHHHHHHHHHHhh
Confidence 4678999999999998751 1223333333333332 56667777777665
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >PF02374 ArsA_ATPase: Anion-transporting ATPase; PDB: 2WOO_A 3IBG_B 3SJA_A 3H84_B 3SJD_A 3ZS9_A 3A37_A 2WOJ_A 3SJC_B 3A36_B | Back alignment and domain information |
|---|
Probab=88.95 E-value=0.37 Score=45.47 Aligned_cols=40 Identities=18% Similarity=0.171 Sum_probs=33.7
Q ss_pred cEEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEecCccc
Q 012645 8 VHVLVLTY-PAQGHINPLLQFAKRLASKRVKATLATTHYTV 47 (459)
Q Consensus 8 ~kil~~~~-~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~ 47 (459)
||++|++. |+-|-..-..++|-.++++|++|.+++.+...
T Consensus 1 ~r~~~~~GKGGVGKTT~aaA~A~~~A~~G~rtLlvS~Dpa~ 41 (305)
T PF02374_consen 1 MRILFFGGKGGVGKTTVAAALALALARRGKRTLLVSTDPAH 41 (305)
T ss_dssp -SEEEEEESTTSSHHHHHHHHHHHHHHTTS-EEEEESSTTT
T ss_pred CeEEEEecCCCCCcHHHHHHHHHHHhhCCCCeeEeecCCCc
Confidence 67888886 89999999999999999999999999987643
|
... |
| >COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=88.32 E-value=20 Score=32.64 Aligned_cols=76 Identities=18% Similarity=0.208 Sum_probs=44.4
Q ss_pred HHHHHHhCCCcEEEEEeCCC-CCCchhhhhhcCC-CceEE-----eeecHHHHhcccCccceeccCchhhHHHhhhcCCe
Q 012645 290 IARGLKASEKPFLWVVKENE-NKLPVEFVNSVGE-TGLVV-----RWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVA 362 (459)
Q Consensus 290 i~~a~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~-~v~v~-----~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP 362 (459)
+.+.+++.|..+++.++... +....-+.+++.. .+.+. +.=|+-+.|+.++- .++|---.|...||++.|+|
T Consensus 189 l~k~l~~~g~~~lisfSRRTp~~~~s~l~~~l~s~~~i~w~~~d~g~NPY~~~La~Ady-ii~TaDSinM~sEAasTgkP 267 (329)
T COG3660 189 LVKILENQGGSFLISFSRRTPDTVKSILKNNLNSSPGIVWNNEDTGYNPYIDMLAAADY-IISTADSINMCSEAASTGKP 267 (329)
T ss_pred HHHHHHhCCceEEEEeecCCcHHHHHHHHhccccCceeEeCCCCCCCCchHHHHhhcce-EEEecchhhhhHHHhccCCC
Confidence 44455667777777776553 2211222222221 12221 33489999966654 24455566999999999999
Q ss_pred eecc
Q 012645 363 VVAV 366 (459)
Q Consensus 363 ~li~ 366 (459)
+-++
T Consensus 268 v~~~ 271 (329)
T COG3660 268 VFIL 271 (329)
T ss_pred eEEE
Confidence 9665
|
|
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=88.02 E-value=5 Score=37.43 Aligned_cols=81 Identities=17% Similarity=0.184 Sum_probs=58.3
Q ss_pred CCceEE-eeec---HHHHhcccCccceecc--CchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCC
Q 012645 322 ETGLVV-RWCN---QFEVLAHQAVGCFITH--CGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAG 395 (459)
Q Consensus 322 ~~v~v~-~~~p---~~~lL~~~~~~~~I~H--GG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~ 395 (459)
+++.+. +++| +..+|+.+|++.|+|+ =|.||++-.++.|||+++-- +-+.|.. +.+. |+-+-.+.+
T Consensus 206 ~~~~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi~~G~~v~l~r---~n~fwqd-l~e~-gv~Vlf~~d--- 277 (322)
T PRK02797 206 ENFQILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCLLIQLGKPVVLSR---DNPFWQD-LTEQ-GLPVLFTGD--- 277 (322)
T ss_pred ccEEehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHHHHHCCCcEEEec---CCchHHH-HHhC-CCeEEecCC---
Confidence 677765 6776 5579999999888886 59999999999999998763 2222222 4555 777655666
Q ss_pred cccHHHHHHHHHHHh
Q 012645 396 IVTGEELNKCVNEVM 410 (459)
Q Consensus 396 ~~~~~~l~~~i~~ll 410 (459)
.++...+.++=+++.
T Consensus 278 ~L~~~~v~e~~rql~ 292 (322)
T PRK02797 278 DLDEDIVREAQRQLA 292 (322)
T ss_pred cccHHHHHHHHHHHH
Confidence 788888877654443
|
|
| >PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin) | Back alignment and domain information |
|---|
Probab=87.50 E-value=3.5 Score=32.60 Aligned_cols=36 Identities=19% Similarity=0.218 Sum_probs=33.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|+++.+.+..-|-.-..-+|..|.++||+|.++...
T Consensus 2 ~v~~~~~~~~~~~lGl~~la~~l~~~G~~v~~~d~~ 37 (121)
T PF02310_consen 2 RVVLACVPGEVHPLGLLYLAAYLRKAGHEVDILDAN 37 (121)
T ss_dssp EEEEEEBTTSSTSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred EEEEEeeCCcchhHHHHHHHHHHHHCCCeEEEECCC
Confidence 789999999999999999999999999999988554
|
Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A .... |
| >PF07355 GRDB: Glycine/sarcosine/betaine reductase selenoprotein B (GRDB); InterPro: IPR022787 This entry represents selenoprotein B of glycine reductase, sarcosine reductase, betaine reductase, D-proline reductase, and perhaps others | Back alignment and domain information |
|---|
Probab=87.20 E-value=5.1 Score=37.92 Aligned_cols=77 Identities=18% Similarity=0.237 Sum_probs=48.1
Q ss_pred CccCHHHHHHHHHHHHhCCCeE--EEEecCccccccCCCCceEEEcCCCCCCCCCCCCCCHHHHHHHHHHhchHHHHHHH
Q 012645 17 AQGHINPLLQFAKRLASKRVKA--TLATTHYTVKSIHATTVGVEPISDGFDEGGFKQAPSVKAYLESFKTVGSRTLAEVI 94 (459)
Q Consensus 17 ~~GH~~p~~~la~~L~~~Gh~V--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 94 (459)
-.|-+-|-+.|.+.|.. +.+| |++|.+++. ..........+.+++
T Consensus 30 ~~g~vGp~~~l~~~l~~-~~eIv~TiiCGDnyf--------------------------------~en~eea~~~i~~mv 76 (349)
T PF07355_consen 30 REGPVGPGLMLEKALKD-DAEIVATIICGDNYF--------------------------------NENKEEALKKILEMV 76 (349)
T ss_pred ccCCCChHHHHHHHhcC-CCEEEEEEEECcchh--------------------------------hhCHHHHHHHHHHHH
Confidence 35667788888888875 4443 445554322 222222334555666
Q ss_pred HHhhcCCCCccEEEeCCCchh----------HHHHHHHcCCceEEEc
Q 012645 95 LKYKDSESPVNCIVYDSLLTW----------ALDVARQFGIYGAAMM 131 (459)
Q Consensus 95 ~~~~~~~~~~Dlvi~D~~~~~----------~~~~a~~lgiP~v~~~ 131 (459)
+++ +||++|+.+.+-+ +..+.++++||.++-.
T Consensus 77 ~~~-----~pD~viaGPaFnagrYG~acg~v~~aV~e~~~IP~vtaM 118 (349)
T PF07355_consen 77 KKL-----KPDVVIAGPAFNAGRYGVACGEVAKAVQEKLGIPVVTAM 118 (349)
T ss_pred Hhc-----CCCEEEEcCCcCCchHHHHHHHHHHHHHHhhCCCEEEEe
Confidence 666 8999999987632 2235568999999743
|
All members are expected to contain an internal UGA codon, encoding selenocysteine, which may be misinterpreted as a stop codon. ; GO: 0030699 glycine reductase activity, 0050485 oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor, 0055114 oxidation-reduction process, 0030700 glycine reductase complex |
| >smart00851 MGS MGS-like domain | Back alignment and domain information |
|---|
Probab=86.81 E-value=3.4 Score=30.90 Aligned_cols=79 Identities=22% Similarity=0.220 Sum_probs=48.2
Q ss_pred HHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcCCCCCCCCCCCCCCHHHHHHHHHHhchHHHHHHHHHhhcCCCC
Q 012645 24 LLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDEGGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESP 103 (459)
Q Consensus 24 ~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 103 (459)
++.+++.|.+.|+++. + ++...+.+++.|+.+..+-..+..+ . .++++.+... +
T Consensus 2 ~~~~~~~l~~lG~~i~-A-T~gTa~~L~~~Gi~~~~~~~ki~~~------~----------------~~i~~~i~~g--~ 55 (90)
T smart00851 2 LVELAKRLAELGFELV-A-TGGTAKFLREAGLPVKTLHPKVHGG------I----------------LAILDLIKNG--E 55 (90)
T ss_pred HHHHHHHHHHCCCEEE-E-ccHHHHHHHHCCCcceeccCCCCCC------C----------------HHHHHHhcCC--C
Confidence 4689999999999983 4 4446677777888764321111110 0 0233444333 8
Q ss_pred ccEEEeCCC---------chhHHHHHHHcCCceE
Q 012645 104 VNCIVYDSL---------LTWALDVARQFGIYGA 128 (459)
Q Consensus 104 ~Dlvi~D~~---------~~~~~~~a~~lgiP~v 128 (459)
.|+||.-.. ...-..+|...+||++
T Consensus 56 id~VIn~~~~~~~~~~~d~~~iRr~A~~~~Ip~~ 89 (90)
T smart00851 56 IDLVINTLYPLGAQPHEDGKALRRAAENIDIPGA 89 (90)
T ss_pred eEEEEECCCcCcceeccCcHHHHHHHHHcCCCee
Confidence 899987432 1234567888899986
|
This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in Carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. This family also includes inosicase. The known structures in this family show a common phosphate binding site PUBMED:10526357. |
| >PF02441 Flavoprotein: Flavoprotein; InterPro: IPR003382 This entry contains a diverse range of flavoprotein enzymes, including epidermin biosynthesis protein, EpiD, which has been shown to be a flavoprotein that binds FMN [] | Back alignment and domain information |
|---|
Probab=86.62 E-value=0.77 Score=37.15 Aligned_cols=46 Identities=7% Similarity=0.036 Sum_probs=37.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCC
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATT 54 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g 54 (459)
|||++...|+.+=+. ...+.++|+++|++|.++.++...+.+....
T Consensus 1 k~i~l~vtGs~~~~~-~~~~l~~L~~~g~~v~vv~S~~A~~~~~~~~ 46 (129)
T PF02441_consen 1 KRILLGVTGSIAAYK-APDLLRRLKRAGWEVRVVLSPSAERFVTPEG 46 (129)
T ss_dssp -EEEEEE-SSGGGGG-HHHHHHHHHTTTSEEEEEESHHHHHHSHHHG
T ss_pred CEEEEEEECHHHHHH-HHHHHHHHhhCCCEEEEEECCcHHHHhhhhc
Confidence 688888888877777 9999999999999999999998777665533
|
This enzyme catalyzes the removal of two reducing equivalents from the cysteine residue of the C-terminal meso-lanthionine of epidermin to form a --C==C-- double bond. This family also includes the B chain of dipicolinate synthase a small polar molecule that accumulates to high concentrations in bacterial endospores, and is thought to play a role in spore heat resistance, or the maintenance of heat resistance []. Dipicolinate synthase catalyses the formation of dipicolinic acid from dihydroxydipicolinic acid. This family also includes phenylacrylic acid decarboxylase 4.1.1 from EC [].; GO: 0003824 catalytic activity; PDB: 3QJG_L 1G63_G 1G5Q_L 1P3Y_1 1QZU_A 1E20_A 1MVN_A 1MVL_A 3ZQU_A 2EJB_A .... |
| >PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt | Back alignment and domain information |
|---|
Probab=85.24 E-value=2.5 Score=38.56 Aligned_cols=92 Identities=17% Similarity=0.243 Sum_probs=54.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCC---CceEEEcCCCCCCCCCCCCCCHHHHHHHHHH
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHAT---TVGVEPISDGFDEGGFKQAPSVKAYLESFKT 84 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (459)
|||+++..-+-| ..||+.|.++|+ |++-+.-++......+ +..... ..+ .+
T Consensus 1 m~ILvlgGTtE~-----r~la~~L~~~g~-v~~sv~t~~g~~~~~~~~~~~~v~~--G~l--------g~---------- 54 (249)
T PF02571_consen 1 MKILVLGGTTEG-----RKLAERLAEAGY-VIVSVATSYGGELLKPELPGLEVRV--GRL--------GD---------- 54 (249)
T ss_pred CEEEEEechHHH-----HHHHHHHHhcCC-EEEEEEhhhhHhhhccccCCceEEE--CCC--------CC----------
Confidence 788888766665 478999999999 6665555444433322 122211 011 01
Q ss_pred hchHHHHHHHHHhhcCCCCccEEE--eCCCch----hHHHHHHHcCCceEEEcc
Q 012645 85 VGSRTLAEVILKYKDSESPVNCIV--YDSLLT----WALDVARQFGIYGAAMMT 132 (459)
Q Consensus 85 ~~~~~~~~l~~~~~~~~~~~Dlvi--~D~~~~----~~~~~a~~lgiP~v~~~~ 132 (459)
.+.+.+++++- ++|+|| +++|.. -+..+|+.+|||++++.-
T Consensus 55 --~~~l~~~l~~~-----~i~~vIDATHPfA~~is~na~~a~~~~~ipylR~eR 101 (249)
T PF02571_consen 55 --EEGLAEFLREN-----GIDAVIDATHPFAAEISQNAIEACRELGIPYLRFER 101 (249)
T ss_pred --HHHHHHHHHhC-----CCcEEEECCCchHHHHHHHHHHHHhhcCcceEEEEc
Confidence 12333444432 788887 444431 156789999999999854
|
Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process |
| >cd00550 ArsA_ATPase Oxyanion-translocating ATPase (ArsA) | Back alignment and domain information |
|---|
Probab=84.57 E-value=3.4 Score=37.88 Aligned_cols=38 Identities=21% Similarity=0.144 Sum_probs=31.9
Q ss_pred EEEEEc-CCCccCHHHHHHHHHHHHhCCCeEEEEecCcc
Q 012645 9 HVLVLT-YPAQGHINPLLQFAKRLASKRVKATLATTHYT 46 (459)
Q Consensus 9 kil~~~-~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~ 46 (459)
|+++++ -|+-|...-...+|..++++|++|.++..+..
T Consensus 1 ~~~~~~gkgG~GKtt~a~~la~~~a~~g~~vLlvd~D~~ 39 (254)
T cd00550 1 RYIFFGGKGGVGKTTISAATAVRLAEQGKKVLLVSTDPA 39 (254)
T ss_pred CEEEEECCCCchHHHHHHHHHHHHHHCCCCceEEeCCCc
Confidence 355555 58999999999999999999999999988653
|
This ATPase is involved in transport of arsenite, antimonite or other oxyanions across biological membranes in all three kingdoms of life. ArsA contains a highly conserved AAA motif present in the AAA+ ATPase superfamily associated with a variety of cellular activities. To form a functional ATP-driven pump, ArsA interacts with the permease ArsB, which is a channel-forming integral membrane protein. One of the most interesting features of ArsA is the allosteric activation by its transport substrates. A divalent cation, typically Mg2+, is required for its enzymatic activity. |
| >COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=84.36 E-value=21 Score=31.39 Aligned_cols=104 Identities=13% Similarity=0.087 Sum_probs=62.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcCCCCCCCCCCCCCCHHHHHHHHHHhchH
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDEGGFKQAPSVKAYLESFKTVGSR 88 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (459)
-|++..+|+-|-.--.-.||++|.+++|+|.-++.++..-..... ++| -.-..+...+...
T Consensus 3 LiIlTGyPgsGKTtfakeLak~L~~~i~~vi~l~kdy~~~i~~DE-----slp-----------i~ke~yres~~ks--- 63 (261)
T COG4088 3 LIILTGYPGSGKTTFAKELAKELRQEIWRVIHLEKDYLRGILWDE-----SLP-----------ILKEVYRESFLKS--- 63 (261)
T ss_pred eEEEecCCCCCchHHHHHHHHHHHHhhhhccccchhhhhheeccc-----ccc-----------hHHHHHHHHHHHH---
Confidence 356666799999999999999999999999887765443322110 000 0001122222222
Q ss_pred HHHHHHHHhhcCCCCccEEEeCCCchh------HHHHHHHcCCceEEEccchHH
Q 012645 89 TLAEVILKYKDSESPVNCIVYDSLLTW------ALDVARQFGIYGAAMMTNSAS 136 (459)
Q Consensus 89 ~~~~l~~~~~~~~~~~Dlvi~D~~~~~------~~~~a~~lgiP~v~~~~~~~~ 136 (459)
..+-+...+ +--+||+|..-+. -+..|.++..++.++....+.
T Consensus 64 ~~rlldSal-----kn~~VIvDdtNYyksmRrqL~ceak~~~tt~ciIyl~~pl 112 (261)
T COG4088 64 VERLLDSAL-----KNYLVIVDDTNYYKSMRRQLACEAKERKTTWCIIYLRTPL 112 (261)
T ss_pred HHHHHHHHh-----cceEEEEecccHHHHHHHHHHHHHHhcCCceEEEEEccCH
Confidence 222222222 2349999987654 345778889998888765533
|
|
| >PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT | Back alignment and domain information |
|---|
Probab=83.38 E-value=6.4 Score=36.39 Aligned_cols=80 Identities=15% Similarity=0.171 Sum_probs=48.0
Q ss_pred HHHHHHHHHHhC-CCcEEEEEeCCC-CCCchhhhhhc---CCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcC
Q 012645 286 QVDEIARGLKAS-EKPFLWVVKENE-NKLPVEFVNSV---GETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLG 360 (459)
Q Consensus 286 ~~~~i~~a~~~~-~~~~v~~~~~~~-~~~~~~~~~~~---~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~G 360 (459)
+.+.+.++.+.. +..++++....+ ......+.+.. ...+.+.+-++-.+|+.+++. |||-.+ ++-.||+.+|
T Consensus 142 ~~~~l~~~~~~~p~~~lvvK~HP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~s~~--VvtinS-tvGlEAll~g 218 (269)
T PF05159_consen 142 FLDMLESFAKENPDAKLVVKPHPDERGGNKYSYLEELPNLPNVVIIDDDVNLYELLEQSDA--VVTINS-TVGLEALLHG 218 (269)
T ss_pred HHHHHHHHHHHCCCCEEEEEECchhhCCCChhHhhhhhcCCCeEEECCCCCHHHHHHhCCE--EEEECC-HHHHHHHHcC
Confidence 344444455544 566665544322 11111222222 223334466788899988887 888854 4789999999
Q ss_pred Ceeecccc
Q 012645 361 VAVVAVPQ 368 (459)
Q Consensus 361 vP~li~P~ 368 (459)
+|++++..
T Consensus 219 kpVi~~G~ 226 (269)
T PF05159_consen 219 KPVIVFGR 226 (269)
T ss_pred CceEEecC
Confidence 99999873
|
Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport |
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=83.12 E-value=43 Score=31.84 Aligned_cols=124 Identities=12% Similarity=0.004 Sum_probs=77.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCc---cccccCCCCceEEEcCCCCCCCCCCCCCCHHHHHHH
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHY---TVKSIHATTVGVEPISDGFDEGGFKQAPSVKAYLES 81 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (459)
.+|.|++++-.|-.||-=++.-=|..|++.|.+|.+++.-. ..+.++.++++++.++.- +... ....-..-.++.
T Consensus 10 ~~k~ra~vvVLGDvGRSPRMqYHA~Sla~~gf~VdliGy~~s~p~e~l~~hprI~ih~m~~l-~~~~-~~p~~~~l~lKv 87 (444)
T KOG2941|consen 10 SKKKRAIVVVLGDVGRSPRMQYHALSLAKLGFQVDLIGYVESIPLEELLNHPRIRIHGMPNL-PFLQ-GGPRVLFLPLKV 87 (444)
T ss_pred cccceEEEEEecccCCChHHHHHHHHHHHcCCeEEEEEecCCCChHHHhcCCceEEEeCCCC-cccC-CCchhhhhHHHH
Confidence 46679999999999999999999999999999999998654 345566789999999732 1110 011111112222
Q ss_pred HHHhchHHHHHHHHHhhcCCCCccEEEe-CCCchhHHHHHH----HcCCceEEEccchHH
Q 012645 82 FKTVGSRTLAEVILKYKDSESPVNCIVY-DSLLTWALDVAR----QFGIYGAAMMTNSAS 136 (459)
Q Consensus 82 ~~~~~~~~~~~l~~~~~~~~~~~Dlvi~-D~~~~~~~~~a~----~lgiP~v~~~~~~~~ 136 (459)
+... ...+..++. + .++|.|+. ++-+.....+|. ..|...++=+++..+
T Consensus 88 f~Qf-l~Ll~aL~~-~----~~~~~ilvQNPP~iPtliv~~~~~~l~~~KfiIDWHNy~Y 141 (444)
T KOG2941|consen 88 FWQF-LSLLWALFV-L----RPPDIILVQNPPSIPTLIVCVLYSILTGAKFIIDWHNYGY 141 (444)
T ss_pred HHHH-HHHHHHHHh-c----cCCcEEEEeCCCCCchHHHHHHHHHHhcceEEEEehhhHH
Confidence 2222 122333333 1 37888864 444444444443 458888888876644
|
|
| >PRK08057 cobalt-precorrin-6x reductase; Reviewed | Back alignment and domain information |
|---|
Probab=82.92 E-value=12 Score=34.19 Aligned_cols=92 Identities=18% Similarity=0.161 Sum_probs=54.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcCCCCCCCCCCCCCCHHHHHHHHHHhch
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDEGGFKQAPSVKAYLESFKTVGS 87 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (459)
++|+++..-+.| ..||+.|.++|++|+..+...+.. ....++..+.= .+ .+ .
T Consensus 3 ~~IlvlgGT~eg-----r~la~~L~~~g~~v~~Svat~~g~-~~~~~~~v~~G--~l--------~~------------~ 54 (248)
T PRK08057 3 PRILLLGGTSEA-----RALARALAAAGVDIVLSLAGRTGG-PADLPGPVRVG--GF--------GG------------A 54 (248)
T ss_pred ceEEEEechHHH-----HHHHHHHHhCCCeEEEEEccCCCC-cccCCceEEEC--CC--------CC------------H
Confidence 568887765555 468999999999988877665544 22223322211 00 01 1
Q ss_pred HHHHHHHHHhhcCCCCccEEE--eCCCch----hHHHHHHHcCCceEEEcc
Q 012645 88 RTLAEVILKYKDSESPVNCIV--YDSLLT----WALDVARQFGIYGAAMMT 132 (459)
Q Consensus 88 ~~~~~l~~~~~~~~~~~Dlvi--~D~~~~----~~~~~a~~lgiP~v~~~~ 132 (459)
+.+.+++.+ . +.++|| +++|.. -+..+|+++|||++++.-
T Consensus 55 ~~l~~~l~~---~--~i~~VIDATHPfA~~is~~a~~ac~~~~ipyiR~eR 100 (248)
T PRK08057 55 EGLAAYLRE---E--GIDLVIDATHPYAAQISANAAAACRALGIPYLRLER 100 (248)
T ss_pred HHHHHHHHH---C--CCCEEEECCCccHHHHHHHHHHHHHHhCCcEEEEeC
Confidence 233344443 2 788877 444432 156789999999999853
|
|
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=82.41 E-value=5.8 Score=40.58 Aligned_cols=84 Identities=14% Similarity=0.053 Sum_probs=51.1
Q ss_pred cHHHHhcccCccceec---cCch-hhHHHhhhcCCeeecccccc-chhhHHHHHHHhhh--ceEEeeecCC--CcccHHH
Q 012645 331 NQFEVLAHQAVGCFIT---HCGW-NSILEGLSLGVAVVAVPQFS-DQPTNAKFVEEVWE--VGVRAKKNRA--GIVTGEE 401 (459)
Q Consensus 331 p~~~lL~~~~~~~~I~---HGG~-gs~~eal~~GvP~li~P~~~-DQ~~na~rv~~~~G--~G~~~~~~~~--~~~~~~~ 401 (459)
++.+++..+++ +|. +=|+ -+++||+++|+|+|.....+ ... +..+... + .|..+..... -..+.++
T Consensus 467 ~y~E~~~g~dl--~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~--v~E~v~~-~~~~gi~V~~r~~~~~~e~v~~ 541 (590)
T cd03793 467 DYEEFVRGCHL--GVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCF--MEEHIED-PESYGIYIVDRRFKSPDESVQQ 541 (590)
T ss_pred chHHHhhhceE--EEeccccCCCCcHHHHHHHcCCCEEEccCcchhhh--hHHHhcc-CCCceEEEecCCccchHHHHHH
Confidence 46788877777 666 4565 48999999999999887532 211 1222222 2 4666653311 1245678
Q ss_pred HHHHHHHHhcChhhHHHH
Q 012645 402 LNKCVNEVMDGERSQKIK 419 (459)
Q Consensus 402 l~~~i~~ll~~~~~~~~~ 419 (459)
|.+++.++++.++.+.+.
T Consensus 542 La~~m~~~~~~~~r~~~~ 559 (590)
T cd03793 542 LTQYMYEFCQLSRRQRII 559 (590)
T ss_pred HHHHHHHHhCCcHHHHHH
Confidence 888888888654333333
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=82.30 E-value=2.1 Score=34.94 Aligned_cols=41 Identities=22% Similarity=0.135 Sum_probs=37.1
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCc
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHY 45 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~ 45 (459)
++|.||++.+.|..||=...--++++|+..|.+|...+.-.
T Consensus 10 g~rprvlvak~GlDgHd~gakvia~~l~d~GfeVi~~g~~~ 50 (143)
T COG2185 10 GARPRVLVAKLGLDGHDRGAKVIARALADAGFEVINLGLFQ 50 (143)
T ss_pred CCCceEEEeccCccccccchHHHHHHHHhCCceEEecCCcC
Confidence 36899999999999999999999999999999999876543
|
|
| >cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins | Back alignment and domain information |
|---|
Probab=82.17 E-value=13 Score=32.75 Aligned_cols=102 Identities=17% Similarity=0.096 Sum_probs=64.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCc----cccccCCCCceEEEcCCCCCCCCCCCCCCHHHHHHHH
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHY----TVKSIHATTVGVEPISDGFDEGGFKQAPSVKAYLESF 82 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (459)
+.||++.+.++..|-....-++..|.++|++|++++..- ..+.+.+.+.+++-+.--... .
T Consensus 82 ~~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~~~~~~d~v~lS~~~~~-----------~---- 146 (201)
T cd02070 82 KGKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEAVKEHKPDILGLSALMTT-----------T---- 146 (201)
T ss_pred CCeEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccc-----------c----
Confidence 569999999999999999999999999999999887542 223333445556555311110 1
Q ss_pred HHhchHHHHHHHHHhhcCCC--CccEEEeCCCchhHHHHHHHcCCceEE
Q 012645 83 KTVGSRTLAEVILKYKDSES--PVNCIVYDSLLTWALDVARQFGIYGAA 129 (459)
Q Consensus 83 ~~~~~~~~~~l~~~~~~~~~--~~Dlvi~D~~~~~~~~~a~~lgiP~v~ 129 (459)
...+.++++.+++... ++.+++..... ....++++|.=.+.
T Consensus 147 ----~~~~~~~i~~lr~~~~~~~~~i~vGG~~~--~~~~~~~~GaD~~~ 189 (201)
T cd02070 147 ----MGGMKEVIEALKEAGLRDKVKVMVGGAPV--NQEFADEIGADGYA 189 (201)
T ss_pred ----HHHHHHHHHHHHHCCCCcCCeEEEECCcC--CHHHHHHcCCcEEE
Confidence 1233455555554433 44556666443 34577787765443
|
A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases. |
| >PF02142 MGS: MGS-like domain This is a subfamily of this family; InterPro: IPR011607 This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine | Back alignment and domain information |
|---|
Probab=81.21 E-value=1.2 Score=33.80 Aligned_cols=85 Identities=18% Similarity=0.183 Sum_probs=49.3
Q ss_pred HHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcCCCCCCCCCCCCCCHHHHHHHHHHhchHHHHHHHHHhhcCCCC
Q 012645 24 LLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDEGGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESP 103 (459)
Q Consensus 24 ~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 103 (459)
++++|+.|.+.||++ ++++...+.+++.|+++..+-........ ..+.. ++.+.++.. +
T Consensus 2 ~~~~a~~l~~lG~~i--~AT~gTa~~L~~~Gi~~~~v~~~~~~~~~-~~g~~----------------~i~~~i~~~--~ 60 (95)
T PF02142_consen 2 IVPLAKRLAELGFEI--YATEGTAKFLKEHGIEVTEVVNKIGEGES-PDGRV----------------QIMDLIKNG--K 60 (95)
T ss_dssp HHHHHHHHHHTTSEE--EEEHHHHHHHHHTT--EEECCEEHSTG-G-GTHCH----------------HHHHHHHTT--S
T ss_pred HHHHHHHHHHCCCEE--EEChHHHHHHHHcCCCceeeeeecccCcc-CCchh----------------HHHHHHHcC--C
Confidence 578999999999765 56666677788889997666422221100 00011 333444333 8
Q ss_pred ccEEEeCCCchh---------HHHHHHHcCCceEE
Q 012645 104 VNCIVYDSLLTW---------ALDVARQFGIYGAA 129 (459)
Q Consensus 104 ~Dlvi~D~~~~~---------~~~~a~~lgiP~v~ 129 (459)
.|+||....... -..+|...+||+++
T Consensus 61 IdlVIn~~~~~~~~~~~dg~~irr~a~~~~Ip~~T 95 (95)
T PF02142_consen 61 IDLVINTPYPFSDQEHTDGYKIRRAAVEYNIPLFT 95 (95)
T ss_dssp EEEEEEE--THHHHHTHHHHHHHHHHHHTTSHEEC
T ss_pred eEEEEEeCCCCcccccCCcHHHHHHHHHcCCCCcC
Confidence 999997653321 24578888999863
|
The known structures in this domain show a common phosphate binding site []. ; PDB: 4A1O_A 3ZZM_A 1ZCZ_A 1M6V_C 1CS0_C 1C30_E 1C3O_G 1BXR_A 1T36_E 1A9X_A .... |
| >cd00561 CobA_CobO_BtuR ATP:corrinoid adenosyltransferase BtuR/CobO/CobP | Back alignment and domain information |
|---|
Probab=80.72 E-value=25 Score=29.51 Aligned_cols=95 Identities=12% Similarity=0.148 Sum_probs=56.6
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhCCCeEEE---EecCcc---ccccCC-CCceEEEcCCCCCCCCCCCCCCHHHHHHHH
Q 012645 10 VLVLTYPAQGHINPLLQFAKRLASKRVKATL---ATTHYT---VKSIHA-TTVGVEPISDGFDEGGFKQAPSVKAYLESF 82 (459)
Q Consensus 10 il~~~~~~~GH~~p~~~la~~L~~~Gh~V~~---~~~~~~---~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (459)
|.+++..+.|-....+.+|-+.+.+|++|.| +-.... ...++. +++++.....++.... .+.....
T Consensus 5 i~vy~g~G~Gkt~~a~g~~~ra~~~g~~v~~vQFlKg~~~~gE~~~l~~l~~v~~~~~g~~~~~~~----~~~~~~~--- 77 (159)
T cd00561 5 IQVYTGNGKGKTTAALGLALRALGHGYRVGVVQFLKGGWKYGELKALERLPNIEIHRMGRGFFWTT----ENDEEDI--- 77 (159)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEEeCCCCccCHHHHHHhCCCcEEEECCCCCccCC----CChHHHH---
Confidence 7788889999999999999999999999999 433211 111222 4788887764432211 1111111
Q ss_pred HHhchHHHHHHHHHhhcCCCCccEEEeCCCch
Q 012645 83 KTVGSRTLAEVILKYKDSESPVNCIVYDSLLT 114 (459)
Q Consensus 83 ~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~ 114 (459)
......+....+.+.. .++|+||.|....
T Consensus 78 -~~a~~~~~~a~~~~~~--~~~dLlVLDEi~~ 106 (159)
T cd00561 78 -AAAAEGWAFAKEAIAS--GEYDLVILDEINY 106 (159)
T ss_pred -HHHHHHHHHHHHHHhc--CCCCEEEEechHh
Confidence 1112333333333322 3899999998755
|
This family consists of the BtuR, CobO, CobP proteins all of which are Cob(I)alamin (vitamin B12) adenosyltransferase, which is involved in cobalamin (vitamin B12) biosynthesis. This enzyme is a homodimer, which catalyzes the adenosylation reaction: ATP + cob(I)alamin + H2O <= phosphate + diphosphate + adenosylcobalamin. |
| >cd01425 RPS2 Ribosomal protein S2 (RPS2), involved in formation of the translation initiation complex, where it might contact the messenger RNA and several components of the ribosome | Back alignment and domain information |
|---|
Probab=80.57 E-value=7.6 Score=33.88 Aligned_cols=113 Identities=16% Similarity=0.149 Sum_probs=58.5
Q ss_pred CHHHHHHHHHHHHhCCCeEEEEecCccccc-cCC----CCceEEEcCCCCCCCCCCCCCCHHHHHHHHHHhchHHHHHHH
Q 012645 20 HINPLLQFAKRLASKRVKATLATTHYTVKS-IHA----TTVGVEPISDGFDEGGFKQAPSVKAYLESFKTVGSRTLAEVI 94 (459)
Q Consensus 20 H~~p~~~la~~L~~~Gh~V~~~~~~~~~~~-~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 94 (459)
++.-.+.+.+.+.++|-+|.|+++...... ++. .|-.|+.- .+-.+..............+.......+...+
T Consensus 41 ~L~~A~~~i~~i~~~~g~iLfV~t~~~~~~~v~~~a~~~~~~~i~~--rw~~G~LTN~~~~~~~~~~~~~~~~~~~~k~~ 118 (193)
T cd01425 41 KLRLALNFIANIAAKGGKILFVGTKPQAQRAVKKFAERTGSFYVNG--RWLGGTLTNWKTIRKSIKRLKKLEKEKLEKNL 118 (193)
T ss_pred HHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCeeecC--eecCCcCCCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 344555566777778999999999854332 222 23333221 12222211112222222222222112233333
Q ss_pred HHhhcCCCCccEEE-eCCCc-hhHHHHHHHcCCceEEEccch
Q 012645 95 LKYKDSESPVNCIV-YDSLL-TWALDVARQFGIYGAAMMTNS 134 (459)
Q Consensus 95 ~~~~~~~~~~Dlvi-~D~~~-~~~~~~a~~lgiP~v~~~~~~ 134 (459)
..+......||+|| .|+.. ..+..=|.++|||.|.+....
T Consensus 119 ~g~~~~~~~Pdlviv~~~~~~~~ai~Ea~~l~IP~I~i~Dtn 160 (193)
T cd01425 119 GGIKDMFRLPDLVIVLDPRKEHQAIREASKLGIPVIAIVDTN 160 (193)
T ss_pred ccccccccCCCEEEEeCCccchHHHHHHHHcCCCEEEEecCC
Confidence 33333335899997 55433 346677889999999987543
|
It has been shown that in Escherichia coli RPS2 is essential for the binding of ribosomal protein S1 to the 30s ribosomal subunit. In humans, most likely in all vertebrates, and perhaps in all metazoans, the protein also functions as the 67 kDa laminin receptor (LAMR1 or 67LR), which is formed from a 37 kDa precursor, and is overexpressed in many tumors. 67LR is a cell surface receptor which interacts with a variety of ligands, laminin-1 and others. It is assumed that the ligand interactions are mediated via the conserved C-terminus, which becomes extracellular as the protein undergoes conformational changes which are not well understood. Specifically, a conserved palindromic motif, LMWWML, may participate in the interactions. 67LR plays essential roles in the adhesion of cells to the basement membrane an |
| >TIGR02015 BchY chlorophyllide reductase subunit Y | Back alignment and domain information |
|---|
Probab=80.09 E-value=15 Score=36.50 Aligned_cols=94 Identities=12% Similarity=0.022 Sum_probs=52.0
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcCCCCCCCCCCCCCCHHHHHHHHHHhchH
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDEGGFKQAPSVKAYLESFKTVGSR 88 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (459)
|+.++..+.. .+.+++.|.+-|-+|..+++........+.-... +. .+...... ..
T Consensus 287 kv~v~g~~~~-----~~~l~~~l~elGmevv~~~t~~~~~~~~~~~~~~--~~-~~~~~v~~-~~--------------- 342 (422)
T TIGR02015 287 RVTVSGYEGS-----ELLVVRLLLESGADVPYVGTAIPRTAWGAEDKRW--LE-MLGVEVKY-RA--------------- 342 (422)
T ss_pred eEEEEcCCcc-----HHHHHHHHHHCCCEEEEEecCCCCccccHHHHHH--HH-hcCCCcee-cc---------------
Confidence 6677666555 8899999999999999887663211111000000 00 00000000 00
Q ss_pred HHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEc
Q 012645 89 TLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMM 131 (459)
Q Consensus 89 ~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~ 131 (459)
.+.+..+.+.+. +||++|... ....+|+++|||.+.+.
T Consensus 343 dl~~~~~~l~~~--~pDllig~s---~~~~~A~k~gIP~vr~g 380 (422)
T TIGR02015 343 SLEDDMEAVLEF--EPDLAIGTT---PLVQFAKEHGIPALYFT 380 (422)
T ss_pred CHHHHHHHHhhC--CCCEEEcCC---cchHHHHHcCCCEEEec
Confidence 111111222222 899999983 36678999999999975
|
This model represents the Y subunit of the three-subunit enzyme, (bacterio)chlorophyllide reductase. This enzyme is responsible for the reduction of the chlorin B-ring and is closely related to the protochlorophyllide reductase complex which reduces the D-ring. Both of these complexes in turn are homologous to nitrogenase. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 459 | ||||
| 2pq6_A | 482 | Crystal Structure Of Medicago Truncatula Ugt85h2- I | 3e-57 | ||
| 2c1x_A | 456 | Structure And Activity Of A Flavonoid 3-O Glucosylt | 2e-43 | ||
| 2vce_A | 480 | Characterization And Engineering Of The Bifunctiona | 2e-40 | ||
| 3hbf_A | 454 | Structure Of Ugt78g1 Complexed With Myricetin And U | 2e-36 | ||
| 2acw_A | 465 | Crystal Structure Of Medicago Truncatula Ugt71g1 Co | 2e-33 | ||
| 2acv_A | 463 | Crystal Structure Of Medicago Truncatula Ugt71g1 Le | 3e-33 | ||
| 2o6l_A | 170 | Crystal Structure Of The Udp-Glucuronic Acid Bindin | 3e-08 | ||
| 2iya_A | 424 | The Crystal Structure Of Macrolide Glycosyltransfer | 2e-05 |
| >pdb|2PQ6|A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase Length = 482 | Back alignment and structure |
|
| >pdb|2C1X|A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification Length = 456 | Back alignment and structure |
|
| >pdb|2VCE|A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants Length = 480 | Back alignment and structure |
|
| >pdb|3HBF|A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp Length = 454 | Back alignment and structure |
|
| >pdb|2ACW|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose Length = 465 | Back alignment and structure |
|
| >pdb|2ACV|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Length = 463 | Back alignment and structure |
|
| >pdb|2O6L|A Chain A, Crystal Structure Of The Udp-Glucuronic Acid Binding Domain Of The Human Drug Metabolizing Udp-Glucuronosyltransferase 2b7 Length = 170 | Back alignment and structure |
|
| >pdb|2IYA|A Chain A, The Crystal Structure Of Macrolide Glycosyltransferases: A Blueprint For Antibiotic Engineering Length = 424 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 Length = 482 | Back alignment and structure |
|---|
Score = 531 bits (1370), Expect = 0.0
Identities = 135/479 (28%), Positives = 224/479 (46%), Gaps = 37/479 (7%)
Query: 1 MENQRE-RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATT----- 54
M N + HV+++ YP QGHINPL + AK L + T T Y K + +
Sbjct: 1 MGNFANRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAF 60
Query: 55 -----VGVEPISDGFDEGG--FKQAPSVKAYLESFKTVGSRTLAEVILKYKDSES--PVN 105
E I DG + V +S + + E++ + S + PV
Sbjct: 61 DGFTDFNFESIPDGLTPMEGDGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVT 120
Query: 106 CIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQI----NHGLLTLP-------VN 154
C+V D +++ + A +F + ++SA G++
Sbjct: 121 CLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERGIIPFKDESYLTNGC 180
Query: 155 QETVPLTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKE 214
ET +PGL + D+ F+ N L +E +NK+ +L N+F ELE +
Sbjct: 181 LETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESD 240
Query: 215 LLRAMLGLWPLVM-IGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIY 273
++ A+ P + IGPL QI + +N+W+ +C+ WL +K SV+Y
Sbjct: 241 VINALSSTIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKED-TECLDWLESKEPGSVVY 299
Query: 274 VSFGSMADIAANQVDEIARGLKASEKPFLWVVKEN-----ENKLPVEFVNSVGETGLVVR 328
V+FGS + Q+ E A GL +K FLW+++ + EF N + + GL+
Sbjct: 300 VNFGSTTVMTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIAS 359
Query: 329 WCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVR 388
WC Q +VL H ++G F+THCGWNS E + GV ++ P F+DQPT+ +F+ WE+G+
Sbjct: 360 WCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGME 419
Query: 389 AKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFV 447
V EEL K +NEV+ G++ +K+K+ + ++ A++ GG S N+++ +
Sbjct: 420 ID----TNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVI 474
|
| >2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* Length = 456 | Back alignment and structure |
|---|
Score = 528 bits (1362), Expect = 0.0
Identities = 130/471 (27%), Positives = 210/471 (44%), Gaps = 36/471 (7%)
Query: 1 MENQRERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYT------VKSIHATT 54
M HV VL +P H PLL +RLA+ A + + T
Sbjct: 1 MSQTTTNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTM 60
Query: 55 VG---VEPISDGFDEGGFKQAPSVKAYLESFKTVGSRTLAEVIL-KYKDSESPVNCIVYD 110
ISDG EG + A + +E F + + ++ ++ PV+C+V D
Sbjct: 61 QCNIKSYDISDGVPEG-YVFAGRPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVAD 119
Query: 111 SLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINH-----GLLTLPVNQETVPLTLPGL 165
+ + +A D+A + G+ T + S + I+ G+ + ++ + +PG+
Sbjct: 120 AFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVSGIQGREDELLNFIPGM 179
Query: 166 PSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPL 225
+ DL + N + + L K V NSFEEL+ L +
Sbjct: 180 SKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSKLKT 239
Query: 226 VM-IGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAA 284
+ IGP + T C++WL + SV+Y+SFG++
Sbjct: 240 YLNIGPFNLIT------------PPPVVPNT-TGCLQWLKERKPTSVVYISFGTVTTPPP 286
Query: 285 NQVDEIARGLKASEKPFLWVVKENEN-KLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGC 343
+V ++ L+AS PF+W +++ LP F+ G+VV W Q EVLAH+AVG
Sbjct: 287 AEVVALSEALEASRVPFIWSLRDKARVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGA 346
Query: 344 FITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELN 403
F+THCGWNS+ E ++ GV ++ P F DQ N + VE+V E+GVR + G+ T L
Sbjct: 347 FVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEG---GVFTKSGLM 403
Query: 404 KCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFV--VRLLK 452
C ++++ E+ +K++ N+ RE A +AV GSS +N V V K
Sbjct: 404 SCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSKPK 454
|
| >3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} PDB: 3hbj_A* Length = 454 | Back alignment and structure |
|---|
Score = 506 bits (1305), Expect = e-178
Identities = 110/459 (23%), Positives = 190/459 (41%), Gaps = 32/459 (6%)
Query: 3 NQRERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLA---TTHYTVKSIHATTVG--- 56
N +HV VL +P H PLL K++A++ K T + TT +
Sbjct: 9 NGNNLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSNEFLPN 68
Query: 57 --VEPISDGFDEGGFKQAPSVKAYLESFKTVGSRTLAEVILK-YKDSESPVNCIVYDSLL 113
+ DG +G + + + + + F VI + ++ + C+V D+
Sbjct: 69 IKYYNVHDGLPKG-YVSSGNPREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFF 127
Query: 114 TWALDVARQFGIYGAAMMTNSASVCSMYWQ---INHGLLTLPVNQETVPLTLPGLPSLAS 170
+ D+A + + T + I + V+ LPG P L +
Sbjct: 128 WFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTGSKEVHDVKSIDVLPGFPELKA 187
Query: 171 SDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVM-IG 229
SDLP + + + + + L + + V NSF + + + + L++ +G
Sbjct: 188 SDLPEGV-IKDIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSKFKLLLNVG 246
Query: 230 PLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDE 289
P + C+ WL SV+Y+SFGS+ +++
Sbjct: 247 PFNLTT------------PQRKVSDE-HGCLEWLDQHENSSVVYISFGSVVTPPPHELTA 293
Query: 290 IARGLKASEKPFLWVVKENEN-KLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHC 348
+A L+ PF+W + + KLP F+ G +V W Q E+L H +VG F+TH
Sbjct: 294 LAESLEECGFPFIWSFRGDPKEKLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHS 353
Query: 349 GWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNE 408
GWNS+LE + GV +++ P F DQ N E V E+GV G++T E + K +
Sbjct: 354 GWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDN---GVLTKESIKKALEL 410
Query: 409 VMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFV 447
M E+ +++ + K +E A KAV G+S + +
Sbjct: 411 TMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLI 449
|
| >2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* Length = 480 | Back alignment and structure |
|---|
Score = 477 bits (1230), Expect = e-166
Identities = 122/479 (25%), Positives = 207/479 (43%), Gaps = 47/479 (9%)
Query: 1 MENQRERVHVLVLTYPAQGHINPLLQFAKRLASKR-VKATLATTHYTVKSIH-ATTVGVE 58
ME + HV ++ P GH+ PL++FAKRL + T S T +
Sbjct: 1 MEESK-TPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSL 59
Query: 59 PIS------DGFDEGGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSL 112
P S D + +++ + T + L +V + + +V D
Sbjct: 60 PSSISSVFLPPVDLTDLSSSTRIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLF 119
Query: 113 LTWALDVARQFGIYGAAMMTNSASVCSMYWQIN--HGLLTLPVNQETVPLTLPGLPSLAS 170
T A DVA +F + +A+V S + + ++ + T PL LPG +A
Sbjct: 120 GTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCEFRELTEPLMLPGCVPVAG 179
Query: 171 SDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAM----LGLWPLV 226
D +L + + +L N+F ELE ++A+ L P+
Sbjct: 180 KDFLDPAQDR--KDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDKPPVY 237
Query: 227 MIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQ 286
+GPLV + + + +C++WL +P SV+YVSFGS + Q
Sbjct: 238 PVGPLVNIGKQEAKQTEE------------SECLKWLDNQPLGSVLYVSFGSGGTLTCEQ 285
Query: 287 VDEIARGLKASEKPFLWVVK-----------------ENENKLPVEFVNSVGETGLVVR- 328
++E+A GL SE+ FLWV++ + LP F+ + G V+
Sbjct: 286 LNELALGLADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPF 345
Query: 329 WCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVR 388
W Q +VLAH + G F+THCGWNS LE + G+ ++A P +++Q NA + E +R
Sbjct: 346 WAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALR 405
Query: 389 AKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFV 447
+ G+V EE+ + V +M+GE + ++ + + +E A + + G+S K +
Sbjct: 406 PRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVA 464
|
| >2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* Length = 463 | Back alignment and structure |
|---|
Score = 431 bits (1111), Expect = e-149
Identities = 109/473 (23%), Positives = 209/473 (44%), Gaps = 43/473 (9%)
Query: 1 MENQRERVHVLVLTYPAQGHINPLLQFAKRLAS--KRVKATLATTHYTVKSIHATT---- 54
M + + ++ + P GH+ L+FAK L + K + T+ + +
Sbjct: 3 MSDINKNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSV 62
Query: 55 ------VGVEPISDGFDEGGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIV 108
+ + + + + + S + Y+ +F + I + V +V
Sbjct: 63 LASQPQIQLIDLPEV-EPPPQELLKSPEFYILTFLESLIPHVKATIKTI--LSNKVVGLV 119
Query: 109 YDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQ---ETVPLTLPGL 165
D +DV +FGI +T++ S+ + + + + + L +PG+
Sbjct: 120 LDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEEVFDDSDRDHQLLNIPGI 179
Query: 166 PS-LASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAM----L 220
+ + S+ LP + Y A + ++ N+F +LE+ + A+
Sbjct: 180 SNQVPSNVLPDACFNK--DGGY-IAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDE 236
Query: 221 GLWPLVMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMA 280
+ P+ +GPL+ + + D ++WL +P+KSV+++ FGSM
Sbjct: 237 KIPPIYAVGPLLDLKGQP---------NPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMG 287
Query: 281 D-IAANQVDEIARGLKASEKPFLWVVKENENKLPVEFV--NSVGETGLVVRWCNQFEVLA 337
+Q+ EIA GLK S FLW + P F+ + G++ W Q EVLA
Sbjct: 288 VSFGPSQIREIALGLKHSGVRFLWSNSAEKKVFPEGFLEWMELEGKGMICGWAPQVEVLA 347
Query: 338 HQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRA--- 394
H+A+G F++HCGWNSILE + GV ++ P +++Q NA + + W VG+ + +
Sbjct: 348 HKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGS 407
Query: 395 GIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFV 447
+V EE+ K + ++MD + + + V + +E ++ AV GGSS ++ + +
Sbjct: 408 DVVAAEEIEKGLKDLMDKDS--IVHKKVQEMKEMSRNAVVDGGSSLISVGKLI 458
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} Length = 424 | Back alignment and structure |
|---|
Score = 129 bits (326), Expect = 2e-33
Identities = 75/426 (17%), Positives = 140/426 (32%), Gaps = 45/426 (10%)
Query: 9 HVLVLTYPAQGHINPLLQFAKRLASK--RVKATLATTHYTVKSIHATTVGVEPISDGFDE 66
H+ P GH+NP L + L ++ RV + A T + A +
Sbjct: 14 HISFFNIPGHGHVNPSLGIVQELVARGHRV--SYAITDEFAAQVKAAGATPVVYDSILPK 71
Query: 67 GGFKQAPS---VKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQF 123
+ ++ + F R L ++ Y D + IVYD A + R++
Sbjct: 72 ESNPEESWPEDQESAMGLFLDEAVRVLPQLEDAYADD--RPDLIVYDIASWPAPVLGRKW 129
Query: 124 GIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPGLPSLASSDLPSFLAQPASN 183
I + + +P + P + P+
Sbjct: 130 DI-------PFVQLSPTFVAYEGFEEDVP------AVQDPTADRGEEAAAPAGTGDAEEG 176
Query: 184 PAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAYLDQQIAG 243
++ F L+ EE + + P I L + + G
Sbjct: 177 AEAEDGLVRFFTRLSA-------FLEEHGVDTPATEFLIAPNRCIVALPRTFQIKGDTVG 229
Query: 244 DSAY--GANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPF 301
D+ G + + W + V+ ++ GS + + +
Sbjct: 230 DNYTFVGPTYGDRSHQ--GTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHV 287
Query: 302 LWVVKENENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGV 361
+ V + + V V +W Q ++L + FITH G S +E LS V
Sbjct: 288 VLSVGR---FVDPADLGEVPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAV 342
Query: 362 AVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRN 421
+VAVPQ ++Q NA+ + E+ +G +++ VT E+L + V V +
Sbjct: 343 PMVAVPQIAEQTMNAERIVEL-GLGRHIPRDQ---VTAEKLREAVLAVASDPG---VAER 395
Query: 422 VSKWRE 427
++ R+
Sbjct: 396 LAAVRQ 401
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} Length = 430 | Back alignment and structure |
|---|
Score = 128 bits (323), Expect = 6e-33
Identities = 70/429 (16%), Positives = 135/429 (31%), Gaps = 59/429 (13%)
Query: 1 MENQRERVHVLVLTYPAQGHINPLLQFAKRLASK--RVKATLATT---HYTVKSIHATTV 55
M Q H+ + + A GH+NP L+ + L ++ RV T A V + V
Sbjct: 1 MTTQTTPAHIAMFSIAAHGHVNPSLEVIRELVARGHRV--TYAIPPVFADKVAATGPRPV 58
Query: 56 GVEPISDGFDEGGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTW 115
G D ++ +E F + L ++ Y + + +++D
Sbjct: 59 LYHSTLPGPDADPEAWGSTLLDNVEPFLNDAIQALPQLADAYA--DDIPDLVLHDITSYP 116
Query: 116 ALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPGLPSLASSDLPS 175
A +AR++G+ ++ N + ++ + P E +
Sbjct: 117 ARVLARRWGVPAVSLSPNLVAWKGYEEEVAEPMWREPRQTERGRAYYA--------RFEA 168
Query: 176 FLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSA 235
+L + + + F + L + L+ + +G
Sbjct: 169 WLKEN-----GITEHPDTF--ASHPPRSLVLIPKALQ--PHADRVDEDVYTFVGACQGDR 219
Query: 236 YLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLK 295
+ W + V+ VS GS E R
Sbjct: 220 AEEGG---------------------WQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFG 258
Query: 296 ASEKPFLWVVKENENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILE 355
L + K+ + + + V W Q +L + F+TH G E
Sbjct: 259 NLPGWHLVLQIGR--KVTPAELGELPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQE 314
Query: 356 GLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMD---- 411
GL+ ++AVPQ DQ NA ++ + V + T + L + ++D
Sbjct: 315 GLATATPMIAVPQAVDQFGNADMLQGL-GVARKLATEE---ATADLLRETALALVDDPEV 370
Query: 412 GERSQKIKR 420
R ++I+
Sbjct: 371 ARRLRRIQA 379
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} Length = 402 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 6e-29
Identities = 68/424 (16%), Positives = 134/424 (31%), Gaps = 63/424 (14%)
Query: 9 HVLVLTYPAQGHINPLLQFAKRLASK--RVKATLATTHYTVKSIHATTVGVEPISDGFDE 66
H+L GH+ P L LA + R+ T TT + A V FD
Sbjct: 6 HILFANVQGHGHVYPSLGLVSELARRGHRI--TYVTTPLFADEVKAAGAEVVLYKSEFDT 63
Query: 67 GGFKQAPSVKAYLESFKTVGSRTLAEVILKYKD--SESPVNCIVYDSLLTWALD-VARQF 123
+ + V R ++ ++ ++P + +VYD A +A ++
Sbjct: 64 FHVPEVVKQEDAETQLHLVYVRENVAILRAAEEALGDNPPDLVVYDVFPFIAGRLLAARW 123
Query: 124 GIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPGLPSLASSDLPSFLAQPASN 183
+V N+ L S+ A +
Sbjct: 124 DR---------PAVRL--------TGGFAANEHY-----SLFKELWKSNGQRHPADVEAV 161
Query: 184 PAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAYLDQQIAG 243
+ L +L ++G ++ + I L S +
Sbjct: 162 HSVLVDLLGKYGV----------------DTPVKEYWDEIEGLTIVFLPKSFQPFAETFD 205
Query: 244 DSAY--GANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPF 301
+ G + G W +P+ V+ VS G+ + A+ +
Sbjct: 206 ERFAFVGPTLTGRDGQP--GWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHV 263
Query: 302 LWVVKENENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGV 361
+ + L + + +W VLAH +TH ++LE + GV
Sbjct: 264 VMAIGG---FLDPAVLGPLPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGV 318
Query: 362 AVVAVPQFS-DQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMD----GERSQ 416
+V VP F+ + +A+ V E+ +G + ++ + + + V + ER +
Sbjct: 319 PLVLVPHFATEAAPSAERVIEL-GLGSVLRPDQ---LEPASIREAVERLAADSAVRERVR 374
Query: 417 KIKR 420
+++R
Sbjct: 375 RMQR 378
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* Length = 415 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 9e-27
Identities = 65/423 (15%), Positives = 128/423 (30%), Gaps = 62/423 (14%)
Query: 9 HVLVLTYPAQGHINPLLQFAKRLASK--RVKATLATTHYTVKSIHATTVGVEPISDGFDE 66
H+L++ + G I P L L + RV + T + + A V P +
Sbjct: 22 HLLIVNVASHGLILPTLTVVTELVRRGHRV--SYVTAGGFAEPVRAAGATVVPYQSEIID 79
Query: 67 GGFKQAPSVKAYLESFKTVGSRTLAEV---ILKYKDSESPVNCIVYDSL-LTWALDVARQ 122
+ + R V + D + P + ++YD +A +
Sbjct: 80 ADAAEVFGSDDLGVRPHLMYLRENVSVLRATAEALDGDVP-DLVLYDDFPFIAGQLLAAR 138
Query: 123 FGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPGL-PSLASSDLPSFLAQPA 181
+ + AS + + L ++ +P+ L LA L +
Sbjct: 139 WRRPAVRLSAAFASNEHYSFSQDMVTLAGTIDPLDLPVFRDTLRDLLAEHGLSRSVVDCW 198
Query: 182 SNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAYLDQQI 241
++ L + + + V +GP D++
Sbjct: 199 NHVE---------------QLNLVFVPKAFQ---IAGDTFDDRFVFVGPCFD----DRRF 236
Query: 242 AGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPF 301
G+ W + V+ VS G+ + + AR
Sbjct: 237 LGE-----------------WTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHV 279
Query: 302 LWVVKENENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGV 361
+ + ++ + + RW +VL V +TH G +++E L G
Sbjct: 280 VMTLG---GQVDPAALGDLPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGR 334
Query: 362 AVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMD----GERSQK 417
+V VPQ D A+ V+++ +G + G+ L V V R +
Sbjct: 335 PLVVVPQSFDVQPMARRVDQL-GLGAVLPGEK---ADGDTLLAAVGAVAADPALLARVEA 390
Query: 418 IKR 420
++
Sbjct: 391 MRG 393
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* Length = 412 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 1e-26
Identities = 61/437 (13%), Positives = 121/437 (27%), Gaps = 117/437 (26%)
Query: 9 HVLVLTYPAQGHINPLLQFAKRLASK--RVKATLATTHYTVKSIHATTVGVEPISDGFDE 66
VL + GH PLL A + V T AT ++ G EP++ G
Sbjct: 22 RVLFASLGTHGHTYPLLPLATAARAAGHEV--TFATGEGFAGTLRKL--GFEPVATGMPV 77
Query: 67 -----------------GGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVY 109
G + F V + + + + + P + +V
Sbjct: 78 FDGFLAALRIRFDTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERLRP-DLVVQ 136
Query: 110 DSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPGLPSLA 169
+ A A + GI P +
Sbjct: 137 EISNYGAGLAALKAGI-------------------------------------PTICHGV 159
Query: 170 SSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIG 229
D P L + + + ++ G +L + + I
Sbjct: 160 GRDTPDDLTRSI--EEEVRGLAQRLG-----------------LDLPPGRIDGFGNPFID 200
Query: 230 PLVPSAYLDQQIAGDSAY--GANIWEPTGDQCMRWLATKP-EKSVIYVSFGSMADIAANQ 286
PS + A + + GD WL+++ + ++Y++ G+ +
Sbjct: 201 IFPPSLQEPEFRARPRRHELRPVPFAEQGDL-PAWLSSRDTARPLVYLTLGTSSGGTVEV 259
Query: 287 VDEIARGLKASEKPFLWVVKENENKLPVEFVNSVGETG------------LVVRWCNQFE 334
+ GL L + + + G + + W Q
Sbjct: 260 LRAAIDGLAG---------------LDADVLVASGPSLDVSGLGEVPANVRLESWVPQAA 304
Query: 335 VLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRA 394
+L H + + H G + L L GV ++ P D NA+ V + G +
Sbjct: 305 LLPHVDL--VVHHGGSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQA-GAGDHLLPDN- 360
Query: 395 GIVTGEELNKCVNEVMD 411
++ + ++ ++
Sbjct: 361 --ISPDSVSGAAKRLLA 375
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} Length = 441 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 3e-23
Identities = 58/444 (13%), Positives = 123/444 (27%), Gaps = 82/444 (18%)
Query: 1 MENQRERVHVLVLTYPAQGHINPLLQFAKRLASK--RVKATLATTHYTVKSIHATTVGVE 58
+ + + V+ + ++ H+ L+ A + V + + + I A +
Sbjct: 14 LVPRGSHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEV--RVVASPALTEDITAAGLTAV 71
Query: 59 PISDGFDEGGF--KQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVN-----CIVYDS 111
P+ D F + Y+ S ++ + + D+
Sbjct: 72 PVGTDVDLVDFMTHAGHDIIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDT 131
Query: 112 LLTWALDVARQFG----IYGAAMMTNSASVCSMYWQINHGLLTLP-VNQETVPLTLPGLP 166
L+ + R++ I+ +A + + P P
Sbjct: 132 LIEGMVSFCRKWRPDLVIWEPLTF--AAPIAAAVTGT-------PHARLLWGPDITTRAR 182
Query: 167 SLASSDLPSFLAQPASNPAY--LAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWP 224
LP + +P L LE++G ++G W
Sbjct: 183 QNFLGLLPDQPEEHREDPLAEWLTWTLEKYG---------------GPAFDEEVVVGQWT 227
Query: 225 LVMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMA---D 281
+ P + LD + + + WL +PE+ + ++ G +
Sbjct: 228 ID---PAPAAIRLDTGLKTVGMRYVD-YNGPSVV-PEWLHDEPERRRVCLTLGISSRENS 282
Query: 282 IAANQVDEIARGLKASEKPFLWVVKENENKLPVEFVNSVGETGL-----------VVRWC 330
I ++E+ + + E + + L V +
Sbjct: 283 IGQVSIEELLGAVGD---------------VDAEIIATFDAQQLEGVANIPDNVRTVGFV 327
Query: 331 NQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAK 390
+L + H G S GV V +P D A+ +E G+
Sbjct: 328 PMHALLPT--CAATVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEF-GAGIALP 384
Query: 391 KNRAGIVTGEELNKCVNEVMDGER 414
T ++L + V V+D
Sbjct: 385 VPEL---TPDQLRESVKRVLDDPA 405
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} Length = 384 | Back alignment and structure |
|---|
Score = 91.8 bits (228), Expect = 2e-20
Identities = 52/429 (12%), Positives = 102/429 (23%), Gaps = 106/429 (24%)
Query: 10 VLVLTYPAQGHINPLLQFAKRLASK--RVKATLATTHYTVKSIHATTVGVEPISDGFDEG 67
+L + + + L A + +V +A + G+ ++
Sbjct: 3 ILFVAAGSPATVFALAPLATAARNAGHQV--VMAANQDMGPVVTGV--GLPAVATTDLPI 58
Query: 68 GFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFG--- 124
+ E+ + + + S L LD +R +
Sbjct: 59 RHFITTDREGRPEAIPSDPVAQARFTGRWFAR--------MAASSLPRMLDFSRAWRPDL 110
Query: 125 -IYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPGLPSLASSDLP--SFLAQPA 181
+ G ++ +P
Sbjct: 111 IVGG-------------------------------TMSYVAPLLALHLGVPHARQTWDAV 139
Query: 182 SNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVM----IGPLVPSAYL 237
+ + LGL L I PS
Sbjct: 140 DADGIHPGADAELRPE-------------------LSELGLERLPAPDLFIDICPPSLRP 180
Query: 238 DQQIAGDSAYGANIWEPTGDQ--CMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLK 295
T Q W+ T+ + + V+ GS + +
Sbjct: 181 ANAAPARMMR----HVATSRQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNF------ 230
Query: 296 ASEKPFLWVVKENENKLPVEFVNSVGETGL----------VVRWCNQFEVLAHQAVGCFI 345
FL + ++ + VE + + +T V W V + +
Sbjct: 231 ----DFLRGLAKDLVRWDVELIVAAPDTVAEALRAEVPQARVGWTPLDVVAPTCDL--LV 284
Query: 346 THCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKC 405
H G S L GLS GV + +P+ S A+ V + + G + E +
Sbjct: 285 HHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADY-GAAIAL---LPGEDSTEAIADS 340
Query: 406 VNEVMDGER 414
E+ +
Sbjct: 341 CQELQAKDT 349
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} Length = 170 | Back alignment and structure |
|---|
Score = 84.6 bits (210), Expect = 2e-19
Identities = 37/162 (22%), Positives = 71/162 (43%), Gaps = 13/162 (8%)
Query: 261 RWLATKPEKSVIYVSFGSM-ADIAANQVDEIARGLKASEKPFLWVVKENENKLPVEFVNS 319
++ + E V+ S GSM +++ + + IA L + LW + ++
Sbjct: 13 DFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLW-------RFDGNKPDT 65
Query: 320 VGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFV 379
+G + +W Q ++L H FITH G N I E + G+ +V +P F+DQP N +
Sbjct: 66 LGLNTRLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHM 125
Query: 380 EEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGER-SQKIKR 420
+ VR N ++ +L + V++ + + +
Sbjct: 126 KAR-GAAVRVDFNT---MSSTDLLNALKRVINDPSYKENVMK 163
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* Length = 398 | Back alignment and structure |
|---|
Score = 86.8 bits (215), Expect = 8e-19
Identities = 50/400 (12%), Positives = 104/400 (26%), Gaps = 85/400 (21%)
Query: 4 QRERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDG 63
+ + VL ++ P GH+ PL+Q A + +A + A G+E +
Sbjct: 17 EGRHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVAEHAD---RAAAAGLEVVDVA 73
Query: 64 FDEGGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQF 123
D K V F + A + ++ + VN L+ + + +
Sbjct: 74 PDYSAVKVFEQVAKDNPRFAETVATRPAIDLEEWGVQIAAVN----RPLVDGTMALVDDY 129
Query: 124 GIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPGLPSLASSDLP--SFLAQPA 181
V GL + + +P
Sbjct: 130 RPD--------LVVYE-------------------QGATVGLLAADRAGVPAVQRNQSAW 162
Query: 182 SNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAYLDQQI 241
+I L ++ + L + + L+ A +
Sbjct: 163 RTRGMHRSIASFLTDL----------MDKHQVSLPEPVATIESFP--PSLLLEAEPEGWF 210
Query: 242 AGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMA--DIAANQVDEIARGLKASEK 299
YG L P + + ++ G++ V+ I
Sbjct: 211 MRWVPYGGGAVLG------DRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGE--- 261
Query: 300 PFLWVVKENENKLPVEFVNSVGETGL-----------VVRWCNQFEVLAHQAVGCFITHC 348
+ +FV ++G+ + V W +L + H
Sbjct: 262 ------------VDADFVLALGDLDISPLGTLPRNVRAVGWTPLHTLLRTCTA--VVHHG 307
Query: 349 GWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVR 388
G +++ + G+ + P DQ + G+
Sbjct: 308 GGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVS-RRGIG 346
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* Length = 391 | Back alignment and structure |
|---|
Score = 86.0 bits (213), Expect = 2e-18
Identities = 54/418 (12%), Positives = 104/418 (24%), Gaps = 82/418 (19%)
Query: 10 VLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDEGGF 69
VLV+ P H+ ++ L + + +A + H + I G
Sbjct: 4 VLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHGAGLTTAGIRGNDRTGDT 63
Query: 70 KQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAA 129
++ +F + + A
Sbjct: 64 GGTTQLRFPNPAFGQRDTEAGRQ----------------------LWEQTASNVAQSSLD 101
Query: 130 MMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPGLPSLASSDLPSFLAQPASNPAYLAA 189
+ E + L PS+ D+ + + + L
Sbjct: 102 QLP-----------------------EYLRLAEAWRPSVLLVDVCALIGRVLGGLLDLPV 138
Query: 190 ILEQFGSLNKNDWVLCNSFEELEKELLRAML---GLWPLVMIGPLVPSAYLDQQIAGDSA 246
+L ++G F + ELL + GL L ++ Q +
Sbjct: 139 VLHRWGVDPTAGP-----FSDRAHELLDPVCRHHGLTGLPTPELILDPCPPSLQASDAPQ 193
Query: 247 YGANIWEPTGDQCM--RWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWV 304
+ P W A + + + G M A + A+E
Sbjct: 194 GAPVQYVPYNGSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAATEL----- 248
Query: 305 VKENENKLPVEFVNSVGETGL-----------VVRWCNQFEVLAHQAVGCFITHCGWNSI 353
VE V +V + L + I G +
Sbjct: 249 -------PGVEAVIAVPPEHRALLTDLPDNARIAESVPLNLFLRTCEL--VICAGGSGTA 299
Query: 354 LEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMD 411
LG+ + +PQ+ DQ A+ + G+ +A E+ + V+
Sbjct: 300 FTATRLGIPQLVLPQYFDQFDYARNLAAA-GAGICLPDEQAQ-SDHEQFTDSIATVLG 355
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 Length = 416 | Back alignment and structure |
|---|
Score = 83.3 bits (206), Expect = 2e-17
Identities = 60/427 (14%), Positives = 118/427 (27%), Gaps = 81/427 (18%)
Query: 10 VLVLTYPAQGHINPLLQFAKRLASK--RVKATLATTHYTVKSIHATTVGVEPISDGFDEG 67
VL+ +G + + A RL + + + + + GV + G +
Sbjct: 3 VLLSVCGTRGDVEIGVALADRLKALGVQT--RMCAPPAAEERLAEV--GVPHVPVGLPQH 58
Query: 68 GFKQ---APSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFG 124
Q P + + + + + + V + + T VA + G
Sbjct: 59 MMLQEGMPPPPPEEEQRLAAMTVEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLG 118
Query: 125 IYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPG---LPSLASSDLPSFLAQPA 181
+ S+ P+ L P+ P
Sbjct: 119 L---------PFFYSVPS----------------PVYLASPHLPPAYDEPTTPGVTDIRV 153
Query: 182 SNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGP----------- 230
A +++G N RA +GL P+ +
Sbjct: 154 LWEERAARFADRYGPTL-NRR--------------RAEIGLPPVEDVFGYGHGERPLLAA 198
Query: 231 ---LVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMA-DIAANQ 286
L P + + ++ + +LA +++ FGS + A+
Sbjct: 199 DPVLAPLQPDVDAVQTGAWLLSDERPLPPEL-EAFLAAGS--PPVHIGFGSSSGRGIADA 255
Query: 287 VDEIARGLKASEKPFLWVVKENENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFIT 346
++A + + E LP + + N + V I
Sbjct: 256 AKVAVEAIRAQGRRVILSRGWTELVLP-----DDRDDCFAIDEVNFQALFRR--VAAVIH 308
Query: 347 HCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCV 406
H + GV + +P+ +DQP A V + +GV T E L+ +
Sbjct: 309 HGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAAL-GIGVAHDGPT---PTFESLSAAL 364
Query: 407 NEVMDGE 413
V+ E
Sbjct: 365 TTVLAPE 371
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} PDB: 3h4i_A* 1pn3_A* 1pnv_A* Length = 404 | Back alignment and structure |
|---|
Score = 83.0 bits (205), Expect = 2e-17
Identities = 73/418 (17%), Positives = 119/418 (28%), Gaps = 81/418 (19%)
Query: 10 VLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDEGGF 69
VL+ ++G PL+ A RL A + V+ V + P+ G
Sbjct: 3 VLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEVGVPMVPVGRAVRAGAR 62
Query: 70 KQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWAL---DVARQFGIY 126
+ E V + +V + + +V LL A+ +A + GI
Sbjct: 63 EPGELPPGAAEVVTEVVAEWFDKVPAAIEGCD----AVVTTGLLPAAVAVRSMAEKLGIP 118
Query: 127 GAAMMTNSASVCS--------MYWQINHGLLTLPVNQETVPLTLPGLPSLAS---SDLPS 175
+ + + S MY Q L VN + LP + L +D P
Sbjct: 119 YRYTVLSPDHLPSEQSQAERDMYNQGADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPW 178
Query: 176 FLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSA 235
A P +P + V G
Sbjct: 179 LAADPVLSPL-------------RPTD--------------------LGTVQTGAW---- 201
Query: 236 YLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLK 295
L Q + + +L +YV FGS A ++
Sbjct: 202 ILPDQ-----------RPLSAE-LEGFLR--AGSPPVYVGFGSGPAPAE-AARVAIEAVR 246
Query: 296 ASEKPFLWVVKENENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILE 355
A + + + ++ + LVV N + V + H G +
Sbjct: 247 AQGRRVV-LSSGWAGLGRIDEGDDC----LVVGEVNHQVLFGR--VAAVVHHGGAGTTTA 299
Query: 356 GLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGE 413
G V VPQ +DQP A V ++ VGV T E L+ + +
Sbjct: 300 VTRAGAPQVVVPQKADQPYYAGRVADL-GVGVAHDGPT---PTVESLSAALATALTPG 353
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 Length = 415 | Back alignment and structure |
|---|
Score = 79.5 bits (196), Expect = 3e-16
Identities = 73/427 (17%), Positives = 119/427 (27%), Gaps = 74/427 (17%)
Query: 10 VLVLTYPAQGHINPLLQFAKRLASK--RVKATLATTHYTVKSIHATTVGVEPISDGFDEG 67
VL+ T ++G PL+ A R+ V + + + V P+
Sbjct: 3 VLLATCGSRGDTEPLVALAVRVRDLGADV--RMCAPPDCAERLAEVGVPHVPVGPSARAP 60
Query: 68 GFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWAL---DVARQFG 124
+ P + F T T + I + +V LL A+ VA + G
Sbjct: 61 IQRAKPLTAEDVRRFTTEAIATQFDEIPAAAE---GCAAVVTTGLLAAAIGVRSVAEKLG 117
Query: 125 IYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPGLPSLASSDLPSFLAQPASNP 184
I P +P S P S
Sbjct: 118 IP-------YFYAFHC------------------PSYVP------SPYYPPPPLGEPSTQ 146
Query: 185 AYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGP-------------- 230
+ +N+ + L R +GL P+ I
Sbjct: 147 DTIDI----PAQWERNNQSAYQRYGGLLNSH-RDAIGLPPVEDIFTFGYTDHPWVAADPV 201
Query: 231 LVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEI 290
L P D A+ P + +L P +Y+ FGS+ A V
Sbjct: 202 LAPLQPTDLDAVQTGAWILPDERPLSPELAAFLDAGP--PPVYLGFGSLGAPAD-AVRVA 258
Query: 291 ARGLKASEKPFLWVVKENENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGW 350
++A + + + LP G + N + V I H G
Sbjct: 259 IDAIRAHGRRVILSRGWADLVLP-----DDGADCFAIGEVNHQVLFGR--VAAVIHHGGA 311
Query: 351 NSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVM 410
+ G + +PQ +DQP A V E+ VGV T + L+ + +
Sbjct: 312 GTTHVAARAGAPQILLPQMADQPYYAGRVAEL-GVGVAHDGPI---PTFDSLSAALATAL 367
Query: 411 DGERSQK 417
E +
Sbjct: 368 TPETHAR 374
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* Length = 398 | Back alignment and structure |
|---|
Score = 77.1 bits (190), Expect = 1e-15
Identities = 25/164 (15%), Positives = 49/164 (29%), Gaps = 24/164 (14%)
Query: 262 WLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENENKLPVEFVNSVG 321
W+ + ++ + ++FG+ L + + KL E V +V
Sbjct: 220 WVFEERKQPRLCLTFGTRVP-------LPNTNTIPGGLSLLQALSQELPKLGFEVVVAVS 272
Query: 322 ETGL-----------VVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFS 370
+ ++ V + H G + L LS GV V+VP +
Sbjct: 273 DKLAQTLQPLPEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQVSVPVIA 330
Query: 371 DQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGER 414
+ +A+ + GV E + + D
Sbjct: 331 EVWDSARLLHAA-GAGVEV---PWEQAGVESVLAACARIRDDSS 370
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 48.7 bits (115), Expect = 3e-06
Identities = 66/452 (14%), Positives = 125/452 (27%), Gaps = 141/452 (31%)
Query: 44 HYTVKSIHATTVGVEPISDGFDEGGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESP 103
Y K I +V + D FD K + K++ S+ + I+ KD+ S
Sbjct: 15 QYQYKDI--LSVFEDAFVDNFD---------CKDVQDMPKSILSKEEIDHIIMSKDAVSG 63
Query: 104 VNCIVYDSLLTWALDVARQF--GI----YGAAM-----------------------MTNS 134
++ +LL+ ++ ++F + Y M + N
Sbjct: 64 TL-RLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYND 122
Query: 135 ASVCS--------MYWQINHGLLTLPVNQETVPLTLPGLP-----SLASSDLPSFLAQPA 181
V + Y ++ LL L + + + G+ +A S+ Q
Sbjct: 123 NQVFAKYNVSRLQPYLKLRQALLELRPAKN---VLIDGVLGSGKTWVALDVCLSYKVQCK 179
Query: 182 -SNPAY---------LAAILEQFGSL----NKNDWVLCNSFE------ELEKELLRAMLG 221
+ +LE L + N + + LR +L
Sbjct: 180 MDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLK 239
Query: 222 LWPLVMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVI-YVSFGSMA 280
P + L + A W C + L T K V ++S +
Sbjct: 240 SKPY-------ENCLLVL----LNVQNAKAWNAFNLSC-KILLTTRFKQVTDFLSAATTT 287
Query: 281 DIAANQVDEIARGL--KASEKPFLWVVKENENKLPVE-------FVNSVGET--GLVVRW 329
I+ +D + L + L + LP E ++ + E+ + W
Sbjct: 288 HIS---LDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATW 344
Query: 330 CNQFEVLAHQAVGCFITHCGWNSILEGL----------SLGVAVVAVPQFSDQPTNAKFV 379
+ ++ + + I L L L V F P +A
Sbjct: 345 -DNWKHVNCDKLTTIIESS-----LNVLEPAEYRKMFDRLSV-------F---PPSAHIP 388
Query: 380 EEV----WEVGVRAKKNRAGIVTGEELNKCVN 407
+ W + +NK
Sbjct: 389 TILLSLIWF-------DVIKSDVMVVVNKLHK 413
|
| >2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A Length = 224 | Back alignment and structure |
|---|
Score = 40.1 bits (93), Expect = 7e-04
Identities = 17/114 (14%), Positives = 36/114 (31%), Gaps = 5/114 (4%)
Query: 272 IYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENENKLPVEFVNSVGETGLVVRWCN 331
+ + FG + + G + S+K + + + + + +
Sbjct: 65 LIIQFGRNYSSEFEHLVQERGGQRESQKIPIDQFGCGDTARQ-YVLMNGKLKVIGFDFST 123
Query: 332 QFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFS----DQPTNAKFVEE 381
+ + + I+H G SIL+ L L ++ S Q A E
Sbjct: 124 KMQSIIRDYSDLVISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVE 177
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 459 | |||
| 3hbf_A | 454 | Flavonoid 3-O-glucosyltransferase; glycosyltransfe | 100.0 | |
| 2vch_A | 480 | Hydroquinone glucosyltransferase; glycosyltransfer | 100.0 | |
| 2pq6_A | 482 | UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl | 100.0 | |
| 2c1x_A | 456 | UDP-glucose flavonoid 3-O glycosyltransferase; WIN | 100.0 | |
| 2acv_A | 463 | Triterpene UDP-glucosyl transferase UGT71G1; glyco | 100.0 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 100.0 | |
| 4amg_A | 400 | Snogd; transferase, polyketide biosynthesis, GT1 f | 100.0 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 100.0 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 100.0 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 100.0 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 100.0 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 100.0 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 100.0 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 100.0 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 100.0 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 100.0 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 100.0 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 100.0 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 100.0 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 99.97 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 99.95 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.88 | |
| 3hbm_A | 282 | UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je | 99.71 | |
| 2jzc_A | 224 | UDP-N-acetylglucosamine transferase subunit ALG13; | 99.59 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 99.47 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 99.44 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 99.43 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.42 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.4 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.37 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.33 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 99.32 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 99.3 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.25 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 99.22 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 99.19 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 99.13 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 98.95 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 98.93 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 98.78 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 98.74 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 98.7 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 98.67 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 98.49 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 98.44 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 98.42 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 98.19 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 97.99 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 97.79 | |
| 1psw_A | 348 | ADP-heptose LPS heptosyltransferase II; structural | 97.77 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 97.72 | |
| 3tov_A | 349 | Glycosyl transferase family 9; structural genomics | 97.72 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 97.61 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 97.6 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 97.58 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 96.96 | |
| 2gt1_A | 326 | Lipopolysaccharide heptosyltransferase-1; GT-B fol | 96.8 | |
| 3ty2_A | 261 | 5'-nucleotidase SURE; surviVal protein, phosphatas | 94.86 | |
| 2phj_A | 251 | 5'-nucleotidase SURE; SURE protein, putative acid | 93.24 | |
| 2e6c_A | 244 | 5'-nucleotidase SURE; SURE protein, cowith mangane | 92.02 | |
| 1j9j_A | 247 | Stationary phase surviVal protein; SURE protein, u | 91.27 | |
| 1l5x_A | 280 | SurviVal protein E; structural genomics, putative | 89.1 | |
| 1g5t_A | 196 | COB(I)alamin adenosyltransferase; P-loop protein, | 88.84 | |
| 1ccw_A | 137 | Protein (glutamate mutase); coenzyme B12, radical | 88.28 | |
| 2v4n_A | 254 | Multifunctional protein SUR E; hydrolase, surviVal | 87.81 | |
| 2wqk_A | 251 | 5'-nucleotidase SURE; SURE protein, putative acid | 87.11 | |
| 2iz6_A | 176 | Molybdenum cofactor carrier protein; metal transpo | 85.85 | |
| 3q0i_A | 318 | Methionyl-tRNA formyltransferase; structural genom | 85.09 | |
| 1mvl_A | 209 | PPC decarboxylase athal3A; flavoprotein, active si | 84.38 | |
| 4dzz_A | 206 | Plasmid partitioning protein PARF; deviant walker | 84.27 | |
| 1fmt_A | 314 | Methionyl-tRNA FMet formyltransferase; initiator t | 83.87 | |
| 3pdi_B | 458 | Nitrogenase MOFE cofactor biosynthesis protein NI; | 83.09 | |
| 2q5c_A | 196 | NTRC family transcriptional regulator; structural | 82.81 | |
| 3lqk_A | 201 | Dipicolinate synthase subunit B; flavoprotein, PSI | 82.8 | |
| 2bw0_A | 329 | 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase | 82.63 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 81.35 | |
| 3qjg_A | 175 | Epidermin biosynthesis protein EPID; structural ge | 80.32 | |
| 3fgn_A | 251 | Dethiobiotin synthetase; biotin biosynthesis, BIOD | 80.31 | |
| 3auf_A | 229 | Glycinamide ribonucleotide transformylase 1; struc | 80.23 | |
| 2vo1_A | 295 | CTP synthase 1; pyrimidine biosynthesis, glutamine | 80.02 |
| >3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-66 Score=509.39 Aligned_cols=428 Identities=25% Similarity=0.418 Sum_probs=347.6
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCC--CeEEEEecCccccccCC------CCceEEEcCCCCCCCCCCCCCCHHH
Q 012645 6 ERVHVLVLTYPAQGHINPLLQFAKRLASKR--VKATLATTHYTVKSIHA------TTVGVEPISDGFDEGGFKQAPSVKA 77 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p~~~la~~L~~~G--h~V~~~~~~~~~~~~~~------~g~~~~~~~~~~~~~~~~~~~~~~~ 77 (459)
++.||+++|+|+.||++|++.||+.|+++| +.|||++++.+...+.+ ++++|+.+|++++.+..... +...
T Consensus 12 ~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~~~~~~i~~~~ipdglp~~~~~~~-~~~~ 90 (454)
T 3hbf_A 12 NLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKYYNVHDGLPKGYVSSG-NPRE 90 (454)
T ss_dssp CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSSCCCTTEEEEECCCCCCTTCCCCS-CTTH
T ss_pred CCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccccCCCCceEEecCCCCCCCccccC-ChHH
Confidence 468999999999999999999999999999 99999999855444322 47999999988876543222 2223
Q ss_pred HHHHHHHhchHHHHHHHHHhh-cCCCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCC--CC
Q 012645 78 YLESFKTVGSRTLAEVILKYK-DSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLP--VN 154 (459)
Q Consensus 78 ~~~~~~~~~~~~~~~l~~~~~-~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p--~~ 154 (459)
.+..+.......+++.++++. +...++|+||+|.++.|+..+|+++|||++.+++++++.+..+.+.+....... ..
T Consensus 91 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~~~~~~ 170 (454)
T 3hbf_A 91 PIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTGSKEV 170 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhcCCCcc
Confidence 333333333445555555542 223478999999999999999999999999999999888877666542111100 00
Q ss_pred CCCCcc-cCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcC-CCeeeecccC
Q 012645 155 QETVPL-TLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGL-WPLVMIGPLV 232 (459)
Q Consensus 155 ~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~vgp~~ 232 (459)
..+..+ .+|++|++..++++.++.. .....+.+.+.+......+++++++||+++||++..+.+... +++++|||+.
T Consensus 171 ~~~~~~~~iPg~p~~~~~dlp~~~~~-~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~~~~v~~vGPl~ 249 (454)
T 3hbf_A 171 HDVKSIDVLPGFPELKASDLPEGVIK-DIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSKFKLLLNVGPFN 249 (454)
T ss_dssp TTSSCBCCSTTSCCBCGGGSCTTSSS-CTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTTSSCEEECCCHH
T ss_pred ccccccccCCCCCCcChhhCchhhcc-CCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhcCCCEEEECCcc
Confidence 011223 3899998888899887653 334456677777777888899999999999999888877654 5799999987
Q ss_pred CCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCC-CC
Q 012645 233 PSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENE-NK 311 (459)
Q Consensus 233 ~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~-~~ 311 (459)
.... ......++++.+||+.++++++|||||||+.....+.+.+++.+++..+++|||+++... ..
T Consensus 250 ~~~~-------------~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~~~~~ 316 (454)
T 3hbf_A 250 LTTP-------------QRKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGDPKEK 316 (454)
T ss_dssp HHSC-------------CSCCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSCHHHH
T ss_pred cccc-------------cccccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchhc
Confidence 5310 000123556999999988899999999999988889999999999999999999998754 46
Q ss_pred CchhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeee
Q 012645 312 LPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKK 391 (459)
Q Consensus 312 ~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~ 391 (459)
+|++|.++.++|+++++|+||.++|+|+++++||||||+||++||+++|||||++|++.||+.||+++++.||+|+.+..
T Consensus 317 lp~~~~~~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~ 396 (454)
T 3hbf_A 317 LPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDN 396 (454)
T ss_dssp SCTTHHHHTTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECGG
T ss_pred CCHhHHhhcCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEecC
Confidence 88889888999999999999999999999888999999999999999999999999999999999999994499999987
Q ss_pred cCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012645 392 NRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLL 451 (459)
Q Consensus 392 ~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~ 451 (459)
. .++.+.|.++|+++|+++++++||+||+++++++++++.+||||...+++|+++|.
T Consensus 397 ~---~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 397 G---VLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp G---SCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHT
T ss_pred C---CCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHh
Confidence 6 79999999999999998777789999999999999999999999999999999874
|
| >2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-61 Score=482.51 Aligned_cols=434 Identities=27% Similarity=0.461 Sum_probs=326.2
Q ss_pred CCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEecCc--cccccC------CCCceEEEcCCCCCCCCCCC
Q 012645 1 MENQRERVHVLVLTYPAQGHINPLLQFAKRLASK-RVKATLATTHY--TVKSIH------ATTVGVEPISDGFDEGGFKQ 71 (459)
Q Consensus 1 m~~~~~~~kil~~~~~~~GH~~p~~~la~~L~~~-Gh~V~~~~~~~--~~~~~~------~~g~~~~~~~~~~~~~~~~~ 71 (459)
|+. .+++||+++|+|+.||++|++.||++|++| ||+|||++++. +...++ ..+++|+++|....... ..
T Consensus 1 M~~-~~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~-~~ 78 (480)
T 2vch_A 1 MEE-SKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVFLPPVDLTDL-SS 78 (480)
T ss_dssp ------CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC-CCTTEEEEECCCCCCTTS-CT
T ss_pred CCC-CCCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhccccCCCceEEEcCCCCCCCC-CC
Confidence 544 466899999999999999999999999998 99999999987 444443 26899999986421111 11
Q ss_pred CCCHHHHHHHHHHhchHHHHHHHHHhhcCCCCc-cEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhccC--
Q 012645 72 APSVKAYLESFKTVGSRTLAEVILKYKDSESPV-NCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGL-- 148 (459)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~-- 148 (459)
..+....+........+.++++++.+. ...++ |+||+|.++.|+..+|+++|||++.++++++.......+.+...
T Consensus 79 ~~~~~~~~~~~~~~~~~~l~~ll~~~~-~~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 157 (480)
T 2vch_A 79 STRIESRISLTVTRSNPELRKVFDSFV-EGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDET 157 (480)
T ss_dssp TCCHHHHHHHHHHTTHHHHHHHHHHHH-HTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHhhhHHHHHHHHHhc-cCCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhc
Confidence 123333333344455667788887763 12377 99999999999999999999999999999877665554332110
Q ss_pred CCCCCCCCCCcccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhc----CCC
Q 012645 149 LTLPVNQETVPLTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLG----LWP 224 (459)
Q Consensus 149 ~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~ 224 (459)
...+.........+|+++++...+++..+... . ......+.+....+++.+++++|++.++++.....+.+ .++
T Consensus 158 ~~~~~~~~~~~~~~Pg~~p~~~~~l~~~~~~~-~-~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~~~~~~~ 235 (480)
T 2vch_A 158 VSCEFRELTEPLMLPGCVPVAGKDFLDPAQDR-K-DDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDKPP 235 (480)
T ss_dssp CCSCGGGCSSCBCCTTCCCBCGGGSCGGGSCT-T-SHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCCTTCCC
T ss_pred CCCcccccCCcccCCCCCCCChHHCchhhhcC-C-chHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhcccCCCc
Confidence 01110000112346777766666666554321 1 12334445555566778899999999999987777754 357
Q ss_pred eeeecccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEE
Q 012645 225 LVMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWV 304 (459)
Q Consensus 225 ~~~vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~ 304 (459)
+++|||+..... +. . ..+.++++.+||+.++++++|||||||+.....+.+..++++++.++++|||+
T Consensus 236 v~~vGpl~~~~~-----~~------~-~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~ 303 (480)
T 2vch_A 236 VYPVGPLVNIGK-----QE------A-KQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWV 303 (480)
T ss_dssp EEECCCCCCCSC-----SC------C------CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeccccccc-----cc------c-CccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEE
Confidence 999999875410 00 0 01245679999999888899999999998888899999999999999999999
Q ss_pred EeCCC-----------------CCCchhhhhhcCCCceEEe-eecHHHHhcccCccceeccCchhhHHHhhhcCCeeecc
Q 012645 305 VKENE-----------------NKLPVEFVNSVGETGLVVR-WCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAV 366 (459)
Q Consensus 305 ~~~~~-----------------~~~~~~~~~~~~~~v~v~~-~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~ 366 (459)
++... ..+|++|.++..++.+++. |+||.+||+|++|++||||||+||++||+++|||||++
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~ 383 (480)
T 2vch_A 304 IRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAW 383 (480)
T ss_dssp ECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEEC
T ss_pred ECCccccccccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEec
Confidence 97632 1366777666666667776 99999999999999999999999999999999999999
Q ss_pred ccccchhhHHHHH-HHhhhceEEeeecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHH
Q 012645 367 PQFSDQPTNAKFV-EEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDE 445 (459)
Q Consensus 367 P~~~DQ~~na~rv-~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~ 445 (459)
|++.||+.||+++ +++ |+|+.+....++.++.+.|.++|+++|++.++++||+||+++++++++++.+||+|..++++
T Consensus 384 P~~~DQ~~na~~l~~~~-G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~~ 462 (480)
T 2vch_A 384 PLYAEQKMNAVLLSEDI-RAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSL 462 (480)
T ss_dssp CCSTTHHHHHHHHHHTT-CCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHH
T ss_pred cccccchHHHHHHHHHh-CeEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHH
Confidence 9999999999997 678 99999875322368999999999999984434499999999999999999999999999999
Q ss_pred HHHHHHH
Q 012645 446 FVVRLLK 452 (459)
Q Consensus 446 ~~~~l~~ 452 (459)
|++++.+
T Consensus 463 ~v~~~~~ 469 (480)
T 2vch_A 463 VALKWKA 469 (480)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999864
|
| >2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-62 Score=488.04 Aligned_cols=445 Identities=30% Similarity=0.559 Sum_probs=333.5
Q ss_pred CCCC-CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCC----------CCceEEEcCCCCCCCC-
Q 012645 1 MENQ-RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHA----------TTVGVEPISDGFDEGG- 68 (459)
Q Consensus 1 m~~~-~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~----------~g~~~~~~~~~~~~~~- 68 (459)
|.+. |+++||+++|+++.||++|++.||++|++|||+|||++++.+...+.+ ++++|+++|++++...
T Consensus 1 ~~~~~~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~lp~~~~ 80 (482)
T 2pq6_A 1 MGNFANRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPMEG 80 (482)
T ss_dssp -------CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECCCCC----
T ss_pred CCcccCCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCCCCCCccc
Confidence 4444 456899999999999999999999999999999999999887655433 3899999997666521
Q ss_pred -CCCCCCHHHHHHHHHHhchHHHHHHHHHhhcC--CCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhh
Q 012645 69 -FKQAPSVKAYLESFKTVGSRTLAEVILKYKDS--ESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQIN 145 (459)
Q Consensus 69 -~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~ 145 (459)
.....+...++..+...+...++++++.+... ..++|+||+|.++.|+..+|+++|||++.++++++.......+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~ 160 (482)
T 2pq6_A 81 DGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFR 160 (482)
T ss_dssp -----CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHH
T ss_pred ccCcchhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHH
Confidence 11123444555555456677888888887632 348999999999999999999999999999998876554433221
Q ss_pred ----ccCCCCCCCC---C---CCcc-cCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHH
Q 012645 146 ----HGLLTLPVNQ---E---TVPL-TLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKE 214 (459)
Q Consensus 146 ----~~~~~~p~~~---~---~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 214 (459)
.+..+..... . .... .+|+++.+...+++.+...........+.+.+......+++++++|++++||++
T Consensus 161 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~ 240 (482)
T 2pq6_A 161 SFVERGIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESD 240 (482)
T ss_dssp HHHHTTCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHH
T ss_pred HHHhcCCCCCccccccccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHhHH
Confidence 2222221110 0 1111 356666555556665554332233344455555556677899999999999998
Q ss_pred HHHHHhcC-CCeeeecccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHH
Q 012645 215 LLRAMLGL-WPLVMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARG 293 (459)
Q Consensus 215 ~~~~~~~~-~~~~~vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a 293 (459)
..+.+... +++++|||+............+...+...|. .+.++.+||+.++++++|||||||+.....+.+..++++
T Consensus 241 ~~~~~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~ 319 (482)
T 2pq6_A 241 VINALSSTIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWK-EDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWG 319 (482)
T ss_dssp HHHHHHTTCTTEEECCCHHHHHHTSTTGGGGCC----------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHH
T ss_pred HHHHHHHhCCcEEEEcCCcccccccccccccccccccccc-cchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHHHHH
Confidence 77776653 5799999986420000000000000011122 244589999998888999999999987788889999999
Q ss_pred HHhCCCcEEEEEeCCC-----CCCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeecccc
Q 012645 294 LKASEKPFLWVVKENE-----NKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQ 368 (459)
Q Consensus 294 ~~~~~~~~v~~~~~~~-----~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~ 368 (459)
++..+++|||+++... ..+++++.++.++|+++++|+||.++|+|+++++||||||+||++||+++|||+|++|+
T Consensus 320 l~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P~ 399 (482)
T 2pq6_A 320 LANCKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPF 399 (482)
T ss_dssp HHHTTCEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCC
T ss_pred HHhcCCcEEEEEcCCccccccccCcHhHHHhcCCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEEecCc
Confidence 9999999999987532 12778888788999999999999999999999999999999999999999999999999
Q ss_pred ccchhhHHHHHH-HhhhceEEeeecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHH
Q 012645 369 FSDQPTNAKFVE-EVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFV 447 (459)
Q Consensus 369 ~~DQ~~na~rv~-~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~ 447 (459)
+.||+.||++++ +. |+|+.+. . .++++.|.++|+++|+|+++++||+||+++++++++++.+||||..++++|+
T Consensus 400 ~~dQ~~na~~~~~~~-G~g~~l~-~---~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v 474 (482)
T 2pq6_A 400 FADQPTDCRFICNEW-EIGMEID-T---NVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVI 474 (482)
T ss_dssp STTHHHHHHHHHHTS-CCEEECC-S---SCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHh-CEEEEEC-C---CCCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHH
Confidence 999999999997 67 9999998 5 7999999999999999986667999999999999999999999999999999
Q ss_pred HHHH
Q 012645 448 VRLL 451 (459)
Q Consensus 448 ~~l~ 451 (459)
+++.
T Consensus 475 ~~~~ 478 (482)
T 2pq6_A 475 KDVL 478 (482)
T ss_dssp HHTT
T ss_pred HHHH
Confidence 9874
|
| >2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-61 Score=477.40 Aligned_cols=434 Identities=30% Similarity=0.496 Sum_probs=324.4
Q ss_pred CCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCe--EEEEecCccccccC-------CCCceEEEcCCCCCCCCCCC
Q 012645 1 MENQRERVHVLVLTYPAQGHINPLLQFAKRLASKRVK--ATLATTHYTVKSIH-------ATTVGVEPISDGFDEGGFKQ 71 (459)
Q Consensus 1 m~~~~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~--V~~~~~~~~~~~~~-------~~g~~~~~~~~~~~~~~~~~ 71 (459)
|+..++++||+++|+|+.||++|++.||+.|++|||+ |||++++.....+. ..+++|++++++++.... .
T Consensus 1 m~~~~~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~~~~~~i~~~~i~~glp~~~~-~ 79 (456)
T 2c1x_A 1 MSQTTTNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDISDGVPEGYV-F 79 (456)
T ss_dssp ------CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC-------CTTEEEEECCCCCCTTCC-C
T ss_pred CCCCCCCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccccCCCceEEEeCCCCCCCccc-c
Confidence 6666778999999999999999999999999999755 57788764333221 148999999877665421 1
Q ss_pred CCCHHHHHHHHHHhchHHHHHHHHHhhcC-CCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhh-----
Q 012645 72 APSVKAYLESFKTVGSRTLAEVILKYKDS-ESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQIN----- 145 (459)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~----- 145 (459)
.......+..+.......++++++++.+. ..++|+||+|.++.|+..+|+++|||+|.++++++..+....+..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 159 (456)
T 2c1x_A 80 AGRPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREK 159 (456)
T ss_dssp CCCTTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHH
T ss_pred cCChHHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhc
Confidence 11222333333333344455555543311 248999999999999999999999999999998876554433211
Q ss_pred ccCCCCCCCCC-CCcccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhc-CC
Q 012645 146 HGLLTLPVNQE-TVPLTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLG-LW 223 (459)
Q Consensus 146 ~~~~~~p~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~ 223 (459)
.+.... .... .....+|+++.+...+++..+........+.+.+.+......+++++++|+++++|++..+.+.. .+
T Consensus 160 ~~~~~~-~~~~~~~~~~~pg~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~~~ 238 (456)
T 2c1x_A 160 IGVSGI-QGREDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSKLK 238 (456)
T ss_dssp HCSSCC-TTCTTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHHHSS
T ss_pred cCCccc-ccccccccccCCCCCcccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHHHhcCC
Confidence 011110 0000 11124788776555555543322222223344444554555678999999999999987666654 35
Q ss_pred CeeeecccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEE
Q 012645 224 PLVMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLW 303 (459)
Q Consensus 224 ~~~~vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~ 303 (459)
++++|||+..... . .. .+.+.++.+|++.++++++|||||||......+.+..++++++..+++|||
T Consensus 239 ~~~~vGpl~~~~~----~--------~~-~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw 305 (456)
T 2c1x_A 239 TYLNIGPFNLITP----P--------PV-VPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIW 305 (456)
T ss_dssp CEEECCCHHHHC----------------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEE
T ss_pred CEEEecCcccCcc----c--------cc-ccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEE
Confidence 7999999864310 0 00 012345889999988889999999999887888899999999999999999
Q ss_pred EEeCCC-CCCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHh
Q 012645 304 VVKENE-NKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEV 382 (459)
Q Consensus 304 ~~~~~~-~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~ 382 (459)
+++... ..+++++.++.++|+++++|+||.++|+|+++++||||||+||++||+++|||||++|++.||+.||+++++.
T Consensus 306 ~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~ 385 (456)
T 2c1x_A 306 SLRDKARVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDV 385 (456)
T ss_dssp ECCGGGGGGSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHT
T ss_pred EECCcchhhCCHHHHhhcCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHH
Confidence 998654 4577888777889999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhceEEeeecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Q 012645 383 WEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLLK 452 (459)
Q Consensus 383 ~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~~ 452 (459)
||+|+.+... .++.+.|.++|+++|+|+++++||+||+++++.+++++.+||||..++++|++++.+
T Consensus 386 ~g~g~~l~~~---~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~~ 452 (456)
T 2c1x_A 386 LEIGVRIEGG---VFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSK 452 (456)
T ss_dssp SCCEEECGGG---SCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHTS
T ss_pred hCeEEEecCC---CcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHh
Confidence 9999999866 799999999999999987667899999999999999999999999999999999853
|
| >2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-60 Score=471.47 Aligned_cols=427 Identities=26% Similarity=0.453 Sum_probs=326.4
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEecCccc-----cccC-----CCCceEEEcCCC-CCCCCCCC
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASK--RVKATLATTHYTV-----KSIH-----ATTVGVEPISDG-FDEGGFKQ 71 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~--Gh~V~~~~~~~~~-----~~~~-----~~g~~~~~~~~~-~~~~~~~~ 71 (459)
++++||+++|+|+.||++|++.||+.|+++ ||+|||++++.+. +.++ ..+++|+++|+. ++.. +.
T Consensus 7 ~~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~--~~ 84 (463)
T 2acv_A 7 NKNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEVEPPPQ--EL 84 (463)
T ss_dssp HHCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCCCCCCG--GG
T ss_pred CCCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCCCCCcc--cc
Confidence 457899999999999999999999999999 9999999998752 2221 158999999865 2221 10
Q ss_pred CCCHHHHHHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCC
Q 012645 72 APSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTL 151 (459)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 151 (459)
.......+..........++++++++ ...++|+||+|.++.|+..+|+++|||++.++++++.......+.+......
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~ll~~~--~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 162 (463)
T 2acv_A 85 LKSPEFYILTFLESLIPHVKATIKTI--LSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEE 162 (463)
T ss_dssp GGSHHHHHHHHHHHTHHHHHHHHHHH--CCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTTC
T ss_pred cCCccHHHHHHHHhhhHHHHHHHHhc--cCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhcccC
Confidence 11111112233344566778888775 2348999999999999999999999999999998877766655544322111
Q ss_pred CCCCCCC---cccCCCC-CCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhc----CC
Q 012645 152 PVNQETV---PLTLPGL-PSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLG----LW 223 (459)
Q Consensus 152 p~~~~~~---~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----~~ 223 (459)
+....+. ...+|++ +++...+++..+... . .....+.+....+++.+++++++++++|+...+.+.+ .+
T Consensus 163 ~~~~~~~~~~~~~~pg~~~~~~~~~l~~~~~~~--~-~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~~~p~~ 239 (463)
T 2acv_A 163 VFDDSDRDHQLLNIPGISNQVPSNVLPDACFNK--D-GGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDEKIP 239 (463)
T ss_dssp CCCCSSGGGCEECCTTCSSCEEGGGSCHHHHCT--T-THHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHCTTSC
T ss_pred CCCCccccCceeECCCCCCCCChHHCchhhcCC--c-hHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHhccccCC
Confidence 1111111 3457887 666655555443322 1 1334445555566778899999999999988777765 45
Q ss_pred CeeeecccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcc-cCCHHHHHHHHHHHHhCCCcEE
Q 012645 224 PLVMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMA-DIAANQVDEIARGLKASEKPFL 302 (459)
Q Consensus 224 ~~~~vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~-~~~~~~~~~i~~a~~~~~~~~v 302 (459)
++++|||+..... .+.. + .. .+.++++.+|++.++++++|||||||+. ....+.+..++++++..+++||
T Consensus 240 ~v~~vGpl~~~~~----~~~~---~-~~-~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l 310 (463)
T 2acv_A 240 PIYAVGPLLDLKG----QPNP---K-LD-QAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFL 310 (463)
T ss_dssp CEEECCCCCCSSC----CCBT---T-BC-HHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEE
T ss_pred cEEEeCCCccccc----cccc---c-cc-cccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEE
Confidence 7999999976410 0000 0 00 0235678999999888899999999998 7788889999999999999999
Q ss_pred EEEeCCCCCCchhhhhhc--CCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHH-
Q 012645 303 WVVKENENKLPVEFVNSV--GETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFV- 379 (459)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~--~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv- 379 (459)
|+++.....+++++.++. ++|+++++|+||.++|+|+++++||||||+||++||+++|||||++|++.||+.||+++
T Consensus 311 ~~~~~~~~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv 390 (463)
T 2acv_A 311 WSNSAEKKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLV 390 (463)
T ss_dssp EECCCCGGGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHH
T ss_pred EEECCCcccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhHHHHHHHH
Confidence 999752124677777676 88999999999999999999999999999999999999999999999999999999995
Q ss_pred HHhhhceEEee-ecCCC--cccHHHHHHHHHHHhc-ChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012645 380 EEVWEVGVRAK-KNRAG--IVTGEELNKCVNEVMD-GERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLL 451 (459)
Q Consensus 380 ~~~~G~G~~~~-~~~~~--~~~~~~l~~~i~~ll~-~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~ 451 (459)
++. |+|+.+. ....+ .++.+.|.++|+++|+ ++ +||+||+++++.+++++.+||+|..++++|++++.
T Consensus 391 ~~~-g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~~---~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~ 462 (463)
T 2acv_A 391 KEW-GVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDS---IVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDIT 462 (463)
T ss_dssp HTS-CCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTTC---THHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHH
T ss_pred HHc-CeEEEEecccCCCCccccHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhc
Confidence 788 9999983 11112 4899999999999997 45 89999999999999999999999999999999985
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-46 Score=369.92 Aligned_cols=398 Identities=17% Similarity=0.203 Sum_probs=270.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcCCCCCCCCCC---CCCCHHHHHHH
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDEGGFK---QAPSVKAYLES 81 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 81 (459)
|++|||+|+++++.||++|+++||++|+++||+|+|++++.+.+.+++.|++|++++..++..... ...+....+..
T Consensus 10 m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (424)
T 2iya_A 10 VTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAAGATPVVYDSILPKESNPEESWPEDQESAMGL 89 (424)
T ss_dssp -CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHTCEEEECCCCSCCTTCTTCCCCSSHHHHHHH
T ss_pred cccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHhCCCEEEecCccccccccchhhcchhHHHHHHH
Confidence 567899999999999999999999999999999999999998888888899999998665432111 12233333333
Q ss_pred HHHhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCccc
Q 012645 82 FKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLT 161 (459)
Q Consensus 82 ~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 161 (459)
+..........+.+.+++. +||+||+|.++.++..+|+++|||++.+++.+.................. +. +
T Consensus 90 ~~~~~~~~~~~l~~~l~~~--~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~-~~-~---- 161 (424)
T 2iya_A 90 FLDEAVRVLPQLEDAYADD--RPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAVQDPTA-DR-G---- 161 (424)
T ss_dssp HHHHHHHHHHHHHHHTTTS--CCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGGGSCCCC---------
T ss_pred HHHHHHHHHHHHHHHHhcc--CCCEEEEcCcccHHHHHHHhcCCCEEEEeccccccccccccccccccccc-cc-c----
Confidence 4343334445555555433 89999999988889999999999999998765311100000000000000 00 0
Q ss_pred CCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhc----------ccCCceEEEcchhHhhHHHHHHHhcC-CCeeeecc
Q 012645 162 LPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGS----------LNKNDWVLCNSFEELEKELLRAMLGL-WPLVMIGP 230 (459)
Q Consensus 162 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~vgp 230 (459)
.+..++....+...+...........+.+.+.... ....+..++++.++++++. ... ++++++||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~~----~~~~~~~~~vGp 237 (424)
T 2iya_A 162 EEAAAPAGTGDAEEGAEAEDGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIKG----DTVGDNYTFVGP 237 (424)
T ss_dssp ------------------HHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTTG----GGCCTTEEECCC
T ss_pred cccccccccccchhhhccchhHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCCc----cCCCCCEEEeCC
Confidence 00000000000000000000000011111111111 1145678888888887632 222 35899999
Q ss_pred cCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCC
Q 012645 231 LVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENEN 310 (459)
Q Consensus 231 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~~ 310 (459)
++... ++..+|++..+++++|||++||......+.+..++++++..+.+++|+++...
T Consensus 238 ~~~~~---------------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~- 295 (424)
T 2iya_A 238 TYGDR---------------------SHQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVVLSVGRFV- 295 (424)
T ss_dssp CCCCC---------------------GGGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEEEECCTTS-
T ss_pred CCCCc---------------------ccCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEEEEECCcC-
Confidence 76431 01235666556678999999999866678888999999988889988876531
Q ss_pred CCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEee
Q 012645 311 KLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAK 390 (459)
Q Consensus 311 ~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~ 390 (459)
..+.+ ...++|+++.+|+||.++|+++++ ||||||+||++||+++|||+|++|...||+.||+++++. |+|..+.
T Consensus 296 -~~~~~-~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~-g~g~~~~ 370 (424)
T 2iya_A 296 -DPADL-GEVPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVEL-GLGRHIP 370 (424)
T ss_dssp -CGGGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHT-TSEEECC
T ss_pred -ChHHh-ccCCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCccchHHHHHHHHHC-CCEEEcC
Confidence 11222 135689999999999999988887 999999999999999999999999999999999999999 9999998
Q ss_pred ecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Q 012645 391 KNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLLK 452 (459)
Q Consensus 391 ~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~~ 452 (459)
.. .++++.|.++|+++|+|+ +++++++++++++++ .++ ...+.+.|+++..
T Consensus 371 ~~---~~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~----~~~-~~~~~~~i~~~~~ 421 (424)
T 2iya_A 371 RD---QVTAEKLREAVLAVASDP---GVAERLAAVRQEIRE----AGG-ARAAADILEGILA 421 (424)
T ss_dssp GG---GCCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHT----SCH-HHHHHHHHHHHHH
T ss_pred cC---CCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHh----cCc-HHHHHHHHHHHHh
Confidence 76 799999999999999998 999999999999875 233 4445555555544
|
| >4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-46 Score=364.11 Aligned_cols=363 Identities=15% Similarity=0.141 Sum_probs=234.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcCCCCCCCC---------CC----C
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDEGG---------FK----Q 71 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---------~~----~ 71 (459)
-+.|||||+++|+.||++|+++||++|++|||+|+|++++.+.+.. ..|+.+.++........ .. .
T Consensus 20 ~~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (400)
T 4amg_A 20 FQSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVA-EAGLCAVDVSPGVNYAKLFVPDDTDVTDPMHSE 98 (400)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHH-TTTCEEEESSTTCCSHHHHSCCC----------
T ss_pred CCCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHH-hcCCeeEecCCchhHhhhccccccccccccchh
Confidence 3579999999999999999999999999999999999999887754 45888888753322110 00 0
Q ss_pred CCCHHHHHHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCC
Q 012645 72 APSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTL 151 (459)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 151 (459)
..........+.......+..+.+.++.. +||+||+|.+++++..+|+.+|||++.+...+......
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~----------- 165 (400)
T 4amg_A 99 GLGEGFFAEMFARVSAVAVDGALRTARSW--RPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPG----------- 165 (400)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHH-----------
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCEEEECcchHHHHHHHHHcCCCceeecccccccccc-----------
Confidence 01111122222222233334444433333 89999999999999999999999999876543110000
Q ss_pred CCCCCCCcccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCce-EEEcchhHhhHHHHHHHhcCCCeeeecc
Q 012645 152 PVNQETVPLTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDW-VLCNSFEELEKELLRAMLGLWPLVMIGP 230 (459)
Q Consensus 152 p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~vgp 230 (459)
...... ..+.....+.......... ............ .......+..+..++
T Consensus 166 ---------------------~~~~~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 218 (400)
T 4amg_A 166 ---------------------LGALIR-----RAMSKDYERHGVTGEPTGSVRLTTTPPSVEAL-LPEDRRSPGAWPMRY 218 (400)
T ss_dssp ---------------------HHHHHH-----HHTHHHHHHTTCCCCCSCEEEEECCCHHHHHT-SCGGGCCTTCEECCC
T ss_pred ---------------------hhhHHH-----HHHHHHHHHhCCCcccccchhhcccCchhhcc-CcccccCCcccCccc
Confidence 000000 0001111111111111111 122221111100 000000011222221
Q ss_pred cCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCC--HHHHHHHHHHHHhCCCcEEEEEeCC
Q 012645 231 LVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIA--ANQVDEIARGLKASEKPFLWVVKEN 308 (459)
Q Consensus 231 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~--~~~~~~i~~a~~~~~~~~v~~~~~~ 308 (459)
.... ....+.+|++..+++++|||||||+.... .+.+..++++++..+.+++|..+..
T Consensus 219 ~~~~--------------------~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~ 278 (400)
T 4amg_A 219 VPYN--------------------GGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGG 278 (400)
T ss_dssp CCCC--------------------CCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTT
T ss_pred cccc--------------------ccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecCc
Confidence 1111 12224568888888999999999986533 3567889999999999999988765
Q ss_pred C-CCCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceE
Q 012645 309 E-NKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGV 387 (459)
Q Consensus 309 ~-~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~ 387 (459)
. ... ...++|+++.+|+||.++|+|+++ ||||||+||++||+++|||+|++|++.||+.||+++++. |+|+
T Consensus 279 ~~~~~-----~~~~~~v~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~-G~g~ 350 (400)
T 4amg_A 279 DLALL-----GELPANVRVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGL-GIGF 350 (400)
T ss_dssp CCCCC-----CCCCTTEEEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHH-TSEE
T ss_pred ccccc-----ccCCCCEEEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHC-CCEE
Confidence 3 211 135789999999999999988777 999999999999999999999999999999999999999 9999
Q ss_pred EeeecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012645 388 RAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLL 451 (459)
Q Consensus 388 ~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~ 451 (459)
.++.. +.++ ++|+++|+|+ +||+||+++++++++. . +-..+.+.++.|.
T Consensus 351 ~l~~~---~~~~----~al~~lL~d~---~~r~~a~~l~~~~~~~----~-~~~~~a~~le~lA 399 (400)
T 4amg_A 351 DAEAG---SLGA----EQCRRLLDDA---GLREAALRVRQEMSEM----P-PPAETAAXLVALA 399 (400)
T ss_dssp ECCTT---TCSH----HHHHHHHHCH---HHHHHHHHHHHHHHTS----C-CHHHHHHHHHHHC
T ss_pred EcCCC---CchH----HHHHHHHcCH---HHHHHHHHHHHHHHcC----C-CHHHHHHHHHHhh
Confidence 99876 6765 4677899999 9999999999999862 2 3445556666653
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-43 Score=347.68 Aligned_cols=378 Identities=16% Similarity=0.162 Sum_probs=252.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcCCCCCCCCCCCCCCHHHHHHHHHHhch
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDEGGFKQAPSVKAYLESFKTVGS 87 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (459)
|||+|+++|+.||++|+++||++|+++||+|+|++++.+.+.+...|++|++++.................+ .....
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~g~~~~~i~~~~~~~~~~~~~~~~~~~---~~~~~ 77 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEVGVPHVPVGPSARAPIQRAKPLTAEDV---RRFTT 77 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCCEEECCC-------CCSCCCHHHH---HHHHH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHcCCeeeeCCCCHHHHhhcccccchHHH---HHHHH
Confidence 799999999999999999999999999999999999998877777899999998553211101011111111 11112
Q ss_pred HHHHHHHHHhhcCCCCccEEEeCC-Cchh--HHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCcccCCC
Q 012645 88 RTLAEVILKYKDSESPVNCIVYDS-LLTW--ALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPG 164 (459)
Q Consensus 88 ~~~~~l~~~~~~~~~~~Dlvi~D~-~~~~--~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~p~ 164 (459)
..+..+++++.....+||+||+|. +..+ +..+|+++|||++.+++++.... .. .+|.
T Consensus 78 ~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~-------~~-------------~~p~ 137 (415)
T 1iir_A 78 EAIATQFDEIPAAAEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVP-------SP-------------YYPP 137 (415)
T ss_dssp HHHHHHHHHHHHHTTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSC-------CS-------------SSCC
T ss_pred HHHHHHHHHHHHHhcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCC-------Cc-------------ccCC
Confidence 222333333332124899999997 6677 88999999999999987763210 00 0111
Q ss_pred CCCCCCCCCCc--cccCCC---CChH----HHHHHHHHhhc--ccC---------CceEEEcchhHhhHHHHHHHhcCCC
Q 012645 165 LPSLASSDLPS--FLAQPA---SNPA----YLAAILEQFGS--LNK---------NDWVLCNSFEELEKELLRAMLGLWP 224 (459)
Q Consensus 165 ~~~~~~~~~~~--~~~~~~---~~~~----~~~~~~~~~~~--~~~---------~~~~~~~~~~~l~~~~~~~~~~~~~ 224 (459)
.. .+. ..+. ..++.. .... +...+.+.... +.. ....++++.+++++. .....+
T Consensus 138 ~~-~~~-~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~l~~~----~~~~~~ 211 (415)
T 1iir_A 138 PP-LGE-PSTQDTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTDHPWVAADPVLAPL----QPTDLD 211 (415)
T ss_dssp CC-----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCC----CCCSSC
T ss_pred cc-CCc-cccchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCCCEEEeeChhhcCC----CcccCC
Confidence 00 000 0000 000000 0000 00000011100 111 014567777766531 011116
Q ss_pred eeeecccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEE
Q 012645 225 LVMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWV 304 (459)
Q Consensus 225 ~~~vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~ 304 (459)
++++||+.... . .+.++++.+|++.+ +++|||++||+. ........++++++..+.+++|+
T Consensus 212 ~~~vG~~~~~~---------------~-~~~~~~~~~~l~~~--~~~v~v~~Gs~~-~~~~~~~~~~~al~~~~~~~v~~ 272 (415)
T 1iir_A 212 AVQTGAWILPD---------------E-RPLSPELAAFLDAG--PPPVYLGFGSLG-APADAVRVAIDAIRAHGRRVILS 272 (415)
T ss_dssp CEECCCCCCCC---------------C-CCCCHHHHHHHHTS--SCCEEEECC----CCHHHHHHHHHHHHHTTCCEEEC
T ss_pred eEeeCCCccCc---------------c-cCCCHHHHHHHhhC--CCeEEEeCCCCC-CcHHHHHHHHHHHHHCCCeEEEE
Confidence 88899876541 0 12466789999865 359999999987 56778888999999999999998
Q ss_pred EeCCCCCCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhh
Q 012645 305 VKENENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWE 384 (459)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G 384 (459)
++...... ...++|+++.+|+||.++|+++++ ||||||+||++||+++|||+|++|...||..||+++++. |
T Consensus 273 ~g~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~-g 344 (415)
T 1iir_A 273 RGWADLVL-----PDDGADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAEL-G 344 (415)
T ss_dssp TTCTTCCC-----SSCGGGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHH-T
T ss_pred eCCCcccc-----cCCCCCEEEeCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCCCEEECCCCCccHHHHHHHHHC-C
Confidence 76542111 124578999999999999955555 999999999999999999999999999999999999999 9
Q ss_pred ceEEeeecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Q 012645 385 VGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLLKA 453 (459)
Q Consensus 385 ~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~~~ 453 (459)
+|..+... .++++.|.++|+++ +|+ +++++++++++++++ ..+...+.+.++++.++
T Consensus 345 ~g~~~~~~---~~~~~~l~~~i~~l-~~~---~~~~~~~~~~~~~~~-----~~~~~~~~~~i~~~~~~ 401 (415)
T 1iir_A 345 VGVAHDGP---IPTFDSLSAALATA-LTP---ETHARATAVAGTIRT-----DGAAVAARLLLDAVSRE 401 (415)
T ss_dssp SEEECSSS---SCCHHHHHHHHHHH-TSH---HHHHHHHHHHHHSCS-----CHHHHHHHHHHHHHHTC
T ss_pred CcccCCcC---CCCHHHHHHHHHHH-cCH---HHHHHHHHHHHHHhh-----cChHHHHHHHHHHHHhc
Confidence 99999876 79999999999999 988 999999999998753 33345555666665543
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-41 Score=335.63 Aligned_cols=377 Identities=16% Similarity=0.207 Sum_probs=259.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcCCCCCCCCCC---CCCCHHHHHHH-
Q 012645 6 ERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDEGGFK---QAPSVKAYLES- 81 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~~~~~- 81 (459)
++|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.++..|+.+..++..++..... ........+..
T Consensus 19 ~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (415)
T 3rsc_A 19 HMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRAAGATVVPYQSEIIDADAAEVFGSDDLGVRPHLM 98 (415)
T ss_dssp CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCEEEECCCSTTTCCHHHHHHSSSSCHHHHHH
T ss_pred cCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHhcCCEEEeccccccccccchhhccccHHHHHHHH
Confidence 45899999999999999999999999999999999999999988888999999998654432100 00011111222
Q ss_pred HHHhchHHHHHHHHHhhcCCCCccEEEeC-CCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCcc
Q 012645 82 FKTVGSRTLAEVILKYKDSESPVNCIVYD-SLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPL 160 (459)
Q Consensus 82 ~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D-~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 160 (459)
+.......+..+.+.+++. +||+||+| ...+++..+|+++|||++.+.+...... . .+.
T Consensus 99 ~~~~~~~~~~~l~~~l~~~--~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~---------~--~~~------- 158 (415)
T 3rsc_A 99 YLRENVSVLRATAEALDGD--VPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNE---------H--YSF------- 158 (415)
T ss_dssp HHHHHHHHHHHHHHHHSSS--CCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCS---------S--CCH-------
T ss_pred HHHHHHHHHHHHHHHHhcc--CCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccC---------c--ccc-------
Confidence 3333334455555555544 89999999 7778899999999999999875431000 0 000
Q ss_pred cCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcc----------cC-CceEEEcchhHhhHHHHHHHhcC-CCeeee
Q 012645 161 TLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSL----------NK-NDWVLCNSFEELEKELLRAMLGL-WPLVMI 228 (459)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~-~~~~~~~~~~~l~~~~~~~~~~~-~~~~~v 228 (459)
.+.+........+. ........+.+....+ .. .+..++...++++.+. ... .++.++
T Consensus 159 -~~~~~~~~~~~~p~------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~----~~~~~~~~~v 227 (415)
T 3rsc_A 159 -SQDMVTLAGTIDPL------DLPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIAG----DTFDDRFVFV 227 (415)
T ss_dssp -HHHHHHHHTCCCGG------GCHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTTG----GGCCTTEEEC
T ss_pred -ccccccccccCChh------hHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCCc----ccCCCceEEe
Confidence 00000000000000 0111111222211111 01 1445555544444311 111 247888
Q ss_pred cccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCC
Q 012645 229 GPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKEN 308 (459)
Q Consensus 229 gp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~ 308 (459)
||++... .+..+|....+++++|||++||......+.+..+++++...+.+++|.++..
T Consensus 228 Gp~~~~~---------------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~g~~ 286 (415)
T 3rsc_A 228 GPCFDDR---------------------RFLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTLGGQ 286 (415)
T ss_dssp CCCCCCC---------------------GGGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEECTTT
T ss_pred CCCCCCc---------------------ccCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEEeCCC
Confidence 8876541 1133454444567899999999987777888999999999888888887643
Q ss_pred CCCCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEE
Q 012645 309 ENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVR 388 (459)
Q Consensus 309 ~~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~ 388 (459)
. ..+.+ ...++|+++.+|+|+.++|+++++ ||||||+||+.||+++|+|+|++|...||+.||.++++. |+|..
T Consensus 287 ~--~~~~l-~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~-g~g~~ 360 (415)
T 3rsc_A 287 V--DPAAL-GDLPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQL-GLGAV 360 (415)
T ss_dssp S--CGGGG-CCCCTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHH-TCEEE
T ss_pred C--ChHHh-cCCCCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHc-CCEEE
Confidence 1 11222 135689999999999999988777 999999999999999999999999999999999999999 99999
Q ss_pred eeecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012645 389 AKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLL 451 (459)
Q Consensus 389 ~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~ 451 (459)
+... +++++.|.++|.++++|+ +++++++++++.+.+ .++ .+.+.+.++++.
T Consensus 361 ~~~~---~~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~----~~~-~~~~~~~i~~~~ 412 (415)
T 3rsc_A 361 LPGE---KADGDTLLAAVGAVAADP---ALLARVEAMRGHVRR----AGG-AARAADAVEAYL 412 (415)
T ss_dssp CCGG---GCCHHHHHHHHHHHHTCH---HHHHHHHHHHHHHHH----SCH-HHHHHHHHHHHH
T ss_pred cccC---CCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHh----cCH-HHHHHHHHHHHh
Confidence 9887 799999999999999998 999999999999876 244 344444444443
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-41 Score=329.24 Aligned_cols=375 Identities=17% Similarity=0.213 Sum_probs=260.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcCCCCCCCCC---CCCCCHHHHHHH-
Q 012645 6 ERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDEGGF---KQAPSVKAYLES- 81 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~~~~- 81 (459)
..|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.++..|+.+..++..++.... ....+....+..
T Consensus 3 ~M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (402)
T 3ia7_A 3 RQRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAAGAEVVLYKSEFDTFHVPEVVKQEDAETQLHLV 82 (402)
T ss_dssp CCCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHTTCEEEECCCGGGTSSSSSSSCCTTHHHHHHHH
T ss_pred CCCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHHcCCEEEecccccccccccccccccchHHHHHHH
Confidence 3369999999999999999999999999999999999998888888889999999754332211 112233444443
Q ss_pred HHHhchHHHHHHHHHhhcCCCCccEEEeC-CCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCcc
Q 012645 82 FKTVGSRTLAEVILKYKDSESPVNCIVYD-SLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPL 160 (459)
Q Consensus 82 ~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D-~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 160 (459)
+.......+..+.+.+++. +||+||+| .+..++..+|+++|||++.+.+.......
T Consensus 83 ~~~~~~~~~~~l~~~l~~~--~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~--------------------- 139 (402)
T 3ia7_A 83 YVRENVAILRAAEEALGDN--PPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEH--------------------- 139 (402)
T ss_dssp HHHHHHHHHHHHHHHHTTC--CCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTT---------------------
T ss_pred HHHHHHHHHHHHHHHHhcc--CCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCcc---------------------
Confidence 4444444556666666554 99999999 77788999999999999998643310000
Q ss_pred cCC--CCCCCCCCCCCccccCCCCChHHHHHHHHHhhcc----------cC-CceEEEcchhHhhHHHHHHHhcC-CCee
Q 012645 161 TLP--GLPSLASSDLPSFLAQPASNPAYLAAILEQFGSL----------NK-NDWVLCNSFEELEKELLRAMLGL-WPLV 226 (459)
Q Consensus 161 ~~p--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~-~~~~~~~~~~~l~~~~~~~~~~~-~~~~ 226 (459)
+.+ .+........+. ........+.+....+ .. .+..++...++++... ... .++.
T Consensus 140 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~----~~~~~~~~ 209 (402)
T 3ia7_A 140 YSLFKELWKSNGQRHPA------DVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPFA----ETFDERFA 209 (402)
T ss_dssp BCHHHHHHHHHTCCCGG------GSHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTTG----GGCCTTEE
T ss_pred ccccccccccccccChh------hHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCcc----ccCCCCeE
Confidence 000 000000000000 0111111222211111 01 1444555544444311 111 2488
Q ss_pred eecccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEe
Q 012645 227 MIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVK 306 (459)
Q Consensus 227 ~vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~ 306 (459)
++||+.... .+...|....+++++||+++||......+.+..+++++...+.+++|.++
T Consensus 210 ~vGp~~~~~---------------------~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 268 (402)
T 3ia7_A 210 FVGPTLTGR---------------------DGQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIG 268 (402)
T ss_dssp ECCCCCCC-------------------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECC
T ss_pred EeCCCCCCc---------------------ccCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeC
Confidence 899876541 11233444445678999999999877778899999999998888888876
Q ss_pred CCCCCCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeecccc-ccchhhHHHHHHHhhhc
Q 012645 307 ENENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQ-FSDQPTNAKFVEEVWEV 385 (459)
Q Consensus 307 ~~~~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~-~~DQ~~na~rv~~~~G~ 385 (459)
... ..+.+. ..++|+++.+|+|+.++|+++++ +|||||+||+.||+++|+|+|++|. ..||+.||.++++. |+
T Consensus 269 ~~~--~~~~~~-~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~-g~ 342 (402)
T 3ia7_A 269 GFL--DPAVLG-PLPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIEL-GL 342 (402)
T ss_dssp TTS--CGGGGC-SCCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHT-TS
T ss_pred CcC--ChhhhC-CCCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHc-CC
Confidence 531 112221 35789999999999999988777 9999999999999999999999999 99999999999999 99
Q ss_pred eEEeeecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012645 386 GVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLL 451 (459)
Q Consensus 386 G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~ 451 (459)
|..+... +++++.|.+++.++|+|+ +++++++++++++.+ .++ ...+.+.++++.
T Consensus 343 g~~~~~~---~~~~~~l~~~~~~ll~~~---~~~~~~~~~~~~~~~----~~~-~~~~~~~i~~~~ 397 (402)
T 3ia7_A 343 GSVLRPD---QLEPASIREAVERLAADS---AVRERVRRMQRDILS----SGG-PARAADEVEAYL 397 (402)
T ss_dssp EEECCGG---GCSHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHT----SCH-HHHHHHHHHHHH
T ss_pred EEEccCC---CCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHhh----CCh-HHHHHHHHHHHH
Confidence 9999887 789999999999999998 999999999998865 344 444444444444
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-42 Score=343.38 Aligned_cols=379 Identities=15% Similarity=0.103 Sum_probs=255.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcCCCCCCCCCC-CCCCHHHHHHHHHHhc
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDEGGFK-QAPSVKAYLESFKTVG 86 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 86 (459)
|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.++..|++|++++......... ........+. ...
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 77 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEVGVPHVPVGLPQHMMLQEGMPPPPPEEEQ---RLA 77 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHTCCEEECSCCGGGCCCTTSCCCCHHHHH---HHH
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHcCCeeeecCCCHHHHHhhccccchhHHHH---HHH
Confidence 799999999999999999999999999999999999988877877899999998543211100 0111111111 111
Q ss_pred hHHHHHHHHHhhcCCCCccEEEeCC-Cchh--HHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCcccCC
Q 012645 87 SRTLAEVILKYKDSESPVNCIVYDS-LLTW--ALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLP 163 (459)
Q Consensus 87 ~~~~~~l~~~~~~~~~~~Dlvi~D~-~~~~--~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~p 163 (459)
...+..+++.+.....+||+||+|. +.++ +..+|+.+|||++.+.+++.... .. .+|
T Consensus 78 ~~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~--------------~~------~~p 137 (416)
T 1rrv_A 78 AMTVEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLA--------------SP------HLP 137 (416)
T ss_dssp HHHHHHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSC--------------CS------SSC
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCC--------------Cc------ccC
Confidence 1222334444431124899999996 4566 78899999999999887652110 00 011
Q ss_pred -CCC-CCCCCCCCccccCCCCC----hHHHHHHHHHhhc--cc----------CCceEEEcchhHhhHHHHHHHhcCCCe
Q 012645 164 -GLP-SLASSDLPSFLAQPASN----PAYLAAILEQFGS--LN----------KNDWVLCNSFEELEKELLRAMLGLWPL 225 (459)
Q Consensus 164 -~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~--~~----------~~~~~~~~~~~~l~~~~~~~~~~~~~~ 225 (459)
.++ ++............... ........+.... +. .. ..++++.++++++. +. .++
T Consensus 138 ~~~~~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~~----~~-~~~ 211 (416)
T 1rrv_A 138 PAYDEPTTPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPVLAPLQ----PD-VDA 211 (416)
T ss_dssp CCBCSCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTTTSCCC----SS-CCC
T ss_pred CCCCCCCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCccccCCC----CC-CCe
Confidence 000 00000000000000000 0000001111100 11 12 46777777776421 11 268
Q ss_pred eeecccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCccc-CCHHHHHHHHHHHHhCCCcEEEE
Q 012645 226 VMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMAD-IAANQVDEIARGLKASEKPFLWV 304 (459)
Q Consensus 226 ~~vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~-~~~~~~~~i~~a~~~~~~~~v~~ 304 (459)
+++||+..+. . .+.++++.+|++.+ +++|||++||... .....+..++++++..+.+++|+
T Consensus 212 ~~vG~~~~~~---------------~-~~~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~~~~v~~ 273 (416)
T 1rrv_A 212 VQTGAWLLSD---------------E-RPLPPELEAFLAAG--SPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVILS 273 (416)
T ss_dssp EECCCCCCCC---------------C-CCCCHHHHHHHHSS--SCCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred eeECCCccCc---------------c-CCCCHHHHHHHhcC--CCeEEEecCCCCccChHHHHHHHHHHHHHCCCeEEEE
Confidence 8999887541 0 12366788999765 3699999999864 44567888999999999999998
Q ss_pred EeCCCCCCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhh
Q 012645 305 VKENENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWE 384 (459)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G 384 (459)
++...... ...++|+++.+|+||.++|+++++ ||||||+||++||+++|||+|++|...||+.||+++++. |
T Consensus 274 ~g~~~~~~-----~~~~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~-g 345 (416)
T 1rrv_A 274 RGWTELVL-----PDDRDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAAL-G 345 (416)
T ss_dssp CTTTTCCC-----SCCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHH-T
T ss_pred eCCccccc-----cCCCCCEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHC-C
Confidence 87542111 235689999999999999966666 999999999999999999999999999999999999999 9
Q ss_pred ceEEeeecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Q 012645 385 VGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLLKA 453 (459)
Q Consensus 385 ~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~~~ 453 (459)
+|..+... ..+++.|.++|+++ +|+ +|+++++++++++++ .+++ .+++.+++++.++
T Consensus 346 ~g~~~~~~---~~~~~~l~~~i~~l-~~~---~~~~~~~~~~~~~~~----~~~~-~~~~~i~e~~~~~ 402 (416)
T 1rrv_A 346 IGVAHDGP---TPTFESLSAALTTV-LAP---ETRARAEAVAGMVLT----DGAA-AAADLVLAAVGRE 402 (416)
T ss_dssp SEEECSSS---CCCHHHHHHHHHHH-TSH---HHHHHHHHHTTTCCC----CHHH-HHHHHHHHHHHC-
T ss_pred CccCCCCC---CCCHHHHHHHHHHh-hCH---HHHHHHHHHHHHHhh----cCcH-HHHHHHHHHHhcc
Confidence 99998876 79999999999999 998 999999999988764 2333 4444332666543
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-41 Score=333.21 Aligned_cols=367 Identities=17% Similarity=0.173 Sum_probs=245.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcCCCCCCCCCCCCCCHHHHHHHHHHhch
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDEGGFKQAPSVKAYLESFKTVGS 87 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (459)
|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.++..|+.|.+++....................+.....
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEVGVPMVPVGRAVRAGAREPGELPPGAAEVVTEVVA 80 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHHTTCCEEECSSCSSGGGSCTTCCCTTCGGGHHHHHH
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHcCCceeecCCCHHHHhccccCCHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999998899999999854331110000010011111222222
Q ss_pred HHHHHHHHHhhcCCCCccEEEeCCCchhH---HHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCcccCCC
Q 012645 88 RTLAEVILKYKDSESPVNCIVYDSLLTWA---LDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPG 164 (459)
Q Consensus 88 ~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~---~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~p~ 164 (459)
..++.+.+.+ .+||+||+|....++ ..+|+++|||++.+..++.... .+.
T Consensus 81 ~~~~~l~~~~----~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~-----------------------~~~ 133 (404)
T 3h4t_A 81 EWFDKVPAAI----EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLP-----------------------SEQ 133 (404)
T ss_dssp HHHHHHHHHH----TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSG-----------------------GGS
T ss_pred HHHHHHHHHh----cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCC-----------------------Chh
Confidence 3333333322 279999998665444 7889999999999887763110 000
Q ss_pred CCCCCCCCCCccccCCCCChHHHHHHHHHhhc--ccC---------CceEEEcchhHhhHHHHHHHhcCCCeeeecccCC
Q 012645 165 LPSLASSDLPSFLAQPASNPAYLAAILEQFGS--LNK---------NDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVP 233 (459)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---------~~~~~~~~~~~l~~~~~~~~~~~~~~~~vgp~~~ 233 (459)
. ........ ...+..+.+.+.+.... +.. .+..+.+..+.+.+. .+...++.++|++..
T Consensus 134 ---~--~~~~~~~~-~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~l~p~----~~~~~~~~~~G~~~~ 203 (404)
T 3h4t_A 134 ---S--QAERDMYN-QGADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSPL----RPTDLGTVQTGAWIL 203 (404)
T ss_dssp ---C--HHHHHHHH-HHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCC----CTTCCSCCBCCCCCC
T ss_pred ---H--HHHHHHHH-HHHHHHhHHHHHHHHHHcCCCCCcchhhccccCCeEEeeCcceeCC----CCCCCCeEEeCcccc
Confidence 0 00000000 00000011111111100 100 011122222222110 000123556665543
Q ss_pred CccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCC-CCC
Q 012645 234 SAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENE-NKL 312 (459)
Q Consensus 234 ~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~-~~~ 312 (459)
+. ..+.++++.+|++. ++++|||++||+.. ..+.+..++++++..+.++||+.+... ...
T Consensus 204 ~~----------------~~~~~~~l~~~l~~--~~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~~g~~~~~~~ 264 (404)
T 3h4t_A 204 PD----------------QRPLSAELEGFLRA--GSPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLSSGWAGLGRI 264 (404)
T ss_dssp CC----------------CCCCCHHHHHHHHT--SSCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEECTTTTCCCS
T ss_pred CC----------------CCCCCHHHHHHHhc--CCCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEEeCCcccccc
Confidence 21 12457788999985 35699999999987 667888999999999999999887543 111
Q ss_pred chhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeec
Q 012645 313 PVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKN 392 (459)
Q Consensus 313 ~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~ 392 (459)
..++|+++.+|+||.++|+++++ ||||||+||+.||+++|||+|++|+..||+.||.++++. |+|..+...
T Consensus 265 ------~~~~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~-G~g~~l~~~ 335 (404)
T 3h4t_A 265 ------DEGDDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVADL-GVGVAHDGP 335 (404)
T ss_dssp ------SCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHH-TSEEECSSS
T ss_pred ------cCCCCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHC-CCEeccCcC
Confidence 24689999999999999976666 999999999999999999999999999999999999999 999999877
Q ss_pred CCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Q 012645 393 RAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLLK 452 (459)
Q Consensus 393 ~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~~ 452 (459)
+++++.|.++|+++++ + +|+++++++++.+.+ . +.+.+.+.|+++.+
T Consensus 336 ---~~~~~~l~~ai~~ll~-~---~~~~~~~~~~~~~~~-----~-~~~~~~~~i~~~~~ 382 (404)
T 3h4t_A 336 ---TPTVESLSAALATALT-P---GIRARAAAVAGTIRT-----D-GTTVAAKLLLEAIS 382 (404)
T ss_dssp ---SCCHHHHHHHHHHHTS-H---HHHHHHHHHHTTCCC-----C-HHHHHHHHHHHHHH
T ss_pred ---CCCHHHHHHHHHHHhC-H---HHHHHHHHHHHHHhh-----h-HHHHHHHHHHHHHh
Confidence 7899999999999999 8 999999999997752 2 33444445555443
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-40 Score=330.13 Aligned_cols=375 Identities=13% Similarity=0.140 Sum_probs=244.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcCCCCCC-CC--------------C
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDE-GG--------------F 69 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~--------------~ 69 (459)
...|||+|++.|+.||++|+++||++|+++||+|+|++++.+.+.++..|++|++++...+. .. .
T Consensus 18 ~~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 97 (441)
T 2yjn_A 18 GSHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITAAGLTAVPVGTDVDLVDFMTHAGHDIIDYVRSL 97 (441)
T ss_dssp -CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHTTTCCEEECSCCCCHHHHHHHTTHHHHHHHTTC
T ss_pred CCccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHhCCCceeecCCccchHHHhhhhhcccccccccc
Confidence 45589999999999999999999999999999999999999888888899999999854310 00 0
Q ss_pred C-----CC-CCHH---HHHHHHHHh----c-hH-HHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccch
Q 012645 70 K-----QA-PSVK---AYLESFKTV----G-SR-TLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNS 134 (459)
Q Consensus 70 ~-----~~-~~~~---~~~~~~~~~----~-~~-~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~ 134 (459)
. .. .... .....+... . .. .+.++++.+++. +||+||+|.++.++..+|+.+|||++.+...+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~pDlVv~d~~~~~~~~aA~~lgiP~v~~~~~~ 175 (441)
T 2yjn_A 98 DFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRKW--RPDLVIWEPLTFAAPIAAAVTGTPHARLLWGP 175 (441)
T ss_dssp CCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHHH--CCSEEEECTTCTHHHHHHHHHTCCEEEECSSC
T ss_pred cccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHhc--CCCEEEecCcchhHHHHHHHcCCCEEEEecCC
Confidence 0 00 0111 111112111 0 12 444554444333 89999999988889999999999999997654
Q ss_pred HHHHHHHHHhhccCCCCCCCCCCCcccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhccc---------CCceEEE
Q 012645 135 ASVCSMYWQINHGLLTLPVNQETVPLTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLN---------KNDWVLC 205 (459)
Q Consensus 135 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~ 205 (459)
............... ..|. . .......+.+.+....+. ..+..+.
T Consensus 176 ~~~~~~~~~~~~~~~-----------~~~~---~------------~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~ 229 (441)
T 2yjn_A 176 DITTRARQNFLGLLP-----------DQPE---E------------HREDPLAEWLTWTLEKYGGPAFDEEVVVGQWTID 229 (441)
T ss_dssp CHHHHHHHHHHHHGG-----------GSCT---T------------TCCCHHHHHHHHHHHHTTCCCCCGGGTSCSSEEE
T ss_pred Ccchhhhhhhhhhcc-----------cccc---c------------cccchHHHHHHHHHHHcCCCCCCccccCCCeEEE
Confidence 321111100000000 0110 0 000111122222221111 1223333
Q ss_pred cchhHhhHHHHHHHhcCCCeeeecccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccC---
Q 012645 206 NSFEELEKELLRAMLGLWPLVMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADI--- 282 (459)
Q Consensus 206 ~~~~~l~~~~~~~~~~~~~~~~vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~--- 282 (459)
+..+.++. +.+.+ -..+++.. +. .+.++.+|++..+++++|||++||+...
T Consensus 230 ~~~~~~~~-----~~~~~-~~~~~~~~-------------------~~-~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~ 283 (441)
T 2yjn_A 230 PAPAAIRL-----DTGLK-TVGMRYVD-------------------YN-GPSVVPEWLHDEPERRRVCLTLGISSRENSI 283 (441)
T ss_dssp CSCGGGSC-----CCCCC-EEECCCCC-------------------CC-SSCCCCGGGSSCCSSCEEEEEC---------
T ss_pred ecCccccC-----CCCCC-CCceeeeC-------------------CC-CCcccchHhhcCCCCCEEEEECCCCcccccC
Confidence 33332221 00000 01111110 00 1233667887666778999999998753
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEEeCCC-CCCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCC
Q 012645 283 AANQVDEIARGLKASEKPFLWVVKENE-NKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGV 361 (459)
Q Consensus 283 ~~~~~~~i~~a~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~Gv 361 (459)
..+.+..+++++...+.++||+.+... ..+. ..++|+++.+|+||.++|+++++ ||||||+||++||+++||
T Consensus 284 ~~~~~~~~~~al~~~~~~~v~~~g~~~~~~l~-----~~~~~v~~~~~~~~~~ll~~ad~--~V~~~G~~t~~Ea~~~G~ 356 (441)
T 2yjn_A 284 GQVSIEELLGAVGDVDAEIIATFDAQQLEGVA-----NIPDNVRTVGFVPMHALLPTCAA--TVHHGGPGSWHTAAIHGV 356 (441)
T ss_dssp -CCSTTTTHHHHHTSSSEEEECCCTTTTSSCS-----SCCSSEEECCSCCHHHHGGGCSE--EEECCCHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHcCCCEEEEEECCcchhhhc-----cCCCCEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCC
Confidence 335677788999988999999887532 2221 24689999999999999966666 999999999999999999
Q ss_pred eeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHH
Q 012645 362 AVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDK 441 (459)
Q Consensus 362 P~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~ 441 (459)
|+|++|...||+.||.++++. |+|..+... +++++.|.++|.++++|+ +++++++++++++.+ ..+.+
T Consensus 357 P~i~~p~~~dQ~~na~~l~~~-g~g~~~~~~---~~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~-----~~~~~ 424 (441)
T 2yjn_A 357 PQVILPDGWDTGVRAQRTQEF-GAGIALPVP---ELTPDQLRESVKRVLDDP---AHRAGAARMRDDMLA-----EPSPA 424 (441)
T ss_dssp CEEECCCSHHHHHHHHHHHHH-TSEEECCTT---TCCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHT-----SCCHH
T ss_pred CEEEeCCcccHHHHHHHHHHc-CCEEEcccc---cCCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHc-----CCCHH
Confidence 999999999999999999999 999999876 799999999999999998 999999999998875 33345
Q ss_pred HHHHHHHHHHH
Q 012645 442 NIDEFVVRLLK 452 (459)
Q Consensus 442 ~~~~~~~~l~~ 452 (459)
.+.+.|+++..
T Consensus 425 ~~~~~i~~~~~ 435 (441)
T 2yjn_A 425 EVVGICEELAA 435 (441)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 55555555554
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-39 Score=322.42 Aligned_cols=367 Identities=18% Similarity=0.210 Sum_probs=247.6
Q ss_pred CCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcCCCCCCCCCC---CCCCHHH
Q 012645 1 MENQRERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDEGGFK---QAPSVKA 77 (459)
Q Consensus 1 m~~~~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~ 77 (459)
|...|+.|||+|++.++.||++|++.||++|+++||+|++++++...+.+...|+.+++++..++..... ...+...
T Consensus 1 M~~~m~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (430)
T 2iyf_A 1 MTTQTTPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAATGPRPVLYHSTLPGPDADPEAWGSTLLD 80 (430)
T ss_dssp -------CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHTTSCEEEECCCCSCCTTSCGGGGCSSHHH
T ss_pred CCCccccceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHhCCCEEEEcCCcCccccccccccchhhHH
Confidence 5555667899999999999999999999999999999999999988777778899999998654322111 0123333
Q ss_pred HHHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCC
Q 012645 78 YLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQET 157 (459)
Q Consensus 78 ~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 157 (459)
.+..+.......+..+.+.+++. +||+||+|.+.+++..+|+++|||++.+.+.+..............
T Consensus 81 ~~~~~~~~~~~~~~~l~~~l~~~--~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~--------- 149 (430)
T 2iyf_A 81 NVEPFLNDAIQALPQLADAYADD--IPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVAEPM--------- 149 (430)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTS--CCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTHHHH---------
T ss_pred HHHHHHHHHHHHHHHHHHHhhcc--CCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccccccch---------
Confidence 33333332233444455545444 8999999988778999999999999998865420000000000000
Q ss_pred CcccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhc----------ccCCceEEEcchhHhhHHHHHHHhcC-CC-e
Q 012645 158 VPLTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGS----------LNKNDWVLCNSFEELEKELLRAMLGL-WP-L 225 (459)
Q Consensus 158 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~l~~~~~~~~~~~-~~-~ 225 (459)
.... . ..+.. ......+.+.... ....+.+++++.++++... ... .+ +
T Consensus 150 ----~~~~--~---~~~~~-------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~----~~~~~~~v 209 (430)
T 2iyf_A 150 ----WREP--R---QTERG-------RAYYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPHA----DRVDEDVY 209 (430)
T ss_dssp ----HHHH--H---HSHHH-------HHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTTG----GGSCTTTE
T ss_pred ----hhhh--c---cchHH-------HHHHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCCc----ccCCCccE
Confidence 0000 0 00000 0000111111111 1135678888887776531 111 25 8
Q ss_pred eeecccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhC-CCcEEEE
Q 012645 226 VMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKAS-EKPFLWV 304 (459)
Q Consensus 226 ~~vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~-~~~~v~~ 304 (459)
+++||.++.. .+..+|....+++++||+++||......+.+..++++++.. +.+++|+
T Consensus 210 ~~vG~~~~~~---------------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~ 268 (430)
T 2iyf_A 210 TFVGACQGDR---------------------AEEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQ 268 (430)
T ss_dssp EECCCCC--------------------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEE
T ss_pred EEeCCcCCCC---------------------CCCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEE
Confidence 8999865431 00123444345677999999999855667888899999885 7888887
Q ss_pred EeCCCCCCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhh
Q 012645 305 VKENENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWE 384 (459)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G 384 (459)
++... ..+.+ +..++|+++.+|+|+.++|+++++ ||||||+||++||+++|+|+|++|...||..||.++++. |
T Consensus 269 ~G~~~--~~~~l-~~~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~-g 342 (430)
T 2iyf_A 269 IGRKV--TPAEL-GELPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQGL-G 342 (430)
T ss_dssp CC-----CGGGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHT-T
T ss_pred eCCCC--ChHHh-ccCCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCccchHHHHHHHHHc-C
Confidence 76532 11222 135689999999999999988887 999999999999999999999999999999999999999 9
Q ss_pred ceEEeeecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHH
Q 012645 385 VGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKK 431 (459)
Q Consensus 385 ~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~ 431 (459)
+|..+... .++++.|.++|.++++|+ ++++++.++++.+.+
T Consensus 343 ~g~~~~~~---~~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~ 383 (430)
T 2iyf_A 343 VARKLATE---EATADLLRETALALVDDP---EVARRLRRIQAEMAQ 383 (430)
T ss_dssp SEEECCCC----CCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHH
T ss_pred CEEEcCCC---CCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHh
Confidence 99998876 789999999999999998 899999999988875
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-39 Score=313.86 Aligned_cols=356 Identities=13% Similarity=0.099 Sum_probs=247.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcCCCCCCCC-------CC--C-CC-CHH
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDEGG-------FK--Q-AP-SVK 76 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------~~--~-~~-~~~ 76 (459)
|||++++.++.||++|+++||++|+++||+|++++++.+.+.++..|+.++.++....... .. . .. ...
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTGVGLPAVATTDLPIRHFITTDREGRPEAIPSDPVAQ 80 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCCEEESCSSCHHHHHHBCTTSCBCCCCCSHHHH
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHhCCCEEEEeCCcchHHHHhhhcccCccccCcchHHH
Confidence 7999999999999999999999999999999999998877777778999999875320000 00 0 10 111
Q ss_pred HHH-HH-HHHhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCC
Q 012645 77 AYL-ES-FKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVN 154 (459)
Q Consensus 77 ~~~-~~-~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~ 154 (459)
..+ .. +.......+..+.+.+++. +||+||+|.+..++..+|+.+|||++.+...+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~l~~~l~~~--~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~------------------- 139 (384)
T 2p6p_A 81 ARFTGRWFARMAASSLPRMLDFSRAW--RPDLIVGGTMSYVAPLLALHLGVPHARQTWDAV------------------- 139 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSC-------------------
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHhcc--CCcEEEECcchhhHHHHHHhcCCCEEEeccCCc-------------------
Confidence 111 11 1112222333343333333 899999998878888999999999998764320
Q ss_pred CCCCcccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhc--cc---CCceEEEcchhHhhHHHHHHHhcCC--Ceee
Q 012645 155 QETVPLTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGS--LN---KNDWVLCNSFEELEKELLRAMLGLW--PLVM 227 (459)
Q Consensus 155 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~ 227 (459)
.+ ... .......+.+.... +. ..+.+++++.+.++.+. ..+ ++.+
T Consensus 140 -------~~-------~~~---------~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~-----~~~~~~~~~ 191 (384)
T 2p6p_A 140 -------DA-------DGI---------HPGADAELRPELSELGLERLPAPDLFIDICPPSLRPAN-----AAPARMMRH 191 (384)
T ss_dssp -------CC-------TTT---------HHHHHHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCTT-----SCCCEECCC
T ss_pred -------cc-------chh---------hHHHHHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCCC-----CCCCCceEe
Confidence 00 000 00011111111111 11 14567777776655311 110 1112
Q ss_pred ecccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccC-----CHHHHHHHHHHHHhCCCcEE
Q 012645 228 IGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADI-----AANQVDEIARGLKASEKPFL 302 (459)
Q Consensus 228 vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~-----~~~~~~~i~~a~~~~~~~~v 302 (459)
++ . . .+.++.+|++..+++++|||++||.... ..+.+..+++++...+.+++
T Consensus 192 ~~-~--~--------------------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~ 248 (384)
T 2p6p_A 192 VA-T--S--------------------RQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELI 248 (384)
T ss_dssp CC-C--C--------------------CCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEE
T ss_pred cC-C--C--------------------CCCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEEE
Confidence 11 0 0 0123556887655667999999998764 45678889999999999999
Q ss_pred EEEeCCCCCCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHh
Q 012645 303 WVVKENENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEV 382 (459)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~ 382 (459)
|+.+.. ..+.+. ..++|+++ +|+||.++|+++++ ||||||+||++||+++|+|+|++|...||+.||.++++.
T Consensus 249 ~~~g~~---~~~~l~-~~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~ 321 (384)
T 2p6p_A 249 VAAPDT---VAEALR-AEVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADY 321 (384)
T ss_dssp EECCHH---HHHHHH-HHCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHHH
T ss_pred EEeCCC---CHHhhC-CCCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEEccCcccchHHHHHHHHC
Confidence 987531 111121 35789999 99999999977666 999999999999999999999999999999999999999
Q ss_pred hhceEEeeecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhc
Q 012645 383 WEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLLKAD 454 (459)
Q Consensus 383 ~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~~~~ 454 (459)
|+|..+... ..+++.|.++|+++|+|+ +++++++++++++++ ..+.+.+.+.|+.+..+.
T Consensus 322 -g~g~~~~~~---~~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~-----~~~~~~~~~~i~~~~~~~ 381 (384)
T 2p6p_A 322 -GAAIALLPG---EDSTEAIADSCQELQAKD---TYARRAQDLSREISG-----MPLPATVVTALEQLAHHH 381 (384)
T ss_dssp -TSEEECCTT---CCCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHT-----SCCHHHHHHHHHHHHHHH
T ss_pred -CCeEecCcC---CCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHh-----CCCHHHHHHHHHHHhhhc
Confidence 999998876 789999999999999998 999999999999986 333455555566665443
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-38 Score=309.58 Aligned_cols=345 Identities=14% Similarity=0.144 Sum_probs=223.1
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcCCCCCC---------C-CCCCCCC
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDE---------G-GFKQAPS 74 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~---------~-~~~~~~~ 74 (459)
..+|||+|++.++.||++|+++||++|+++||+|++++++.+.+.++..|+.++.++..... . .......
T Consensus 13 ~~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (398)
T 4fzr_A 13 GSHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTGAGLPFAPTCPSLDMPEVLSWDREGNRTTMPRE 92 (398)
T ss_dssp --CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHHTTCCEEEEESSCCHHHHHSBCTTSCBCCCCSS
T ss_pred CCceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHhCCCeeEecCCccchHhhhhhhccCcccccccc
Confidence 45799999999999999999999999999999999999998888888889999998632110 0 0000011
Q ss_pred HHH----HHHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCC
Q 012645 75 VKA----YLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLT 150 (459)
Q Consensus 75 ~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 150 (459)
... ....+.......+..+.+.+++. +||+|++|...+++..+|+.+|||++.+.........
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~----------- 159 (398)
T 4fzr_A 93 EKPLLEHIGRGYGRLVLRMRDEALALAERW--KPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPEL----------- 159 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHH-----------
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchh-----------
Confidence 111 11122222223333343333333 8999999988888999999999999987654310000
Q ss_pred CCCCCCCCcccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcc-----cCCceEEEcchhHhhHHHHHHHhcCCCe
Q 012645 151 LPVNQETVPLTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSL-----NKNDWVLCNSFEELEKELLRAMLGLWPL 225 (459)
Q Consensus 151 ~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 225 (459)
+ .......+.+....+ ...+..+......+.... . ...
T Consensus 160 -------------------------~------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~ 202 (398)
T 4fzr_A 160 -------------------------I------KSAGVGELAPELAELGLTDFPDPLLSIDVCPPSMEAQP-----K-PGT 202 (398)
T ss_dssp -------------------------H------HHHHHHHTHHHHHTTTCSSCCCCSEEEECSCGGGC----------CCC
T ss_pred -------------------------h------hHHHHHHHHHHHHHcCCCCCCCCCeEEEeCChhhCCCC-----C-CCC
Confidence 0 000111111111111 112333433333333210 0 001
Q ss_pred eeecccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccC--------CHHHHHHHHHHHHhC
Q 012645 226 VMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADI--------AANQVDEIARGLKAS 297 (459)
Q Consensus 226 ~~vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~--------~~~~~~~i~~a~~~~ 297 (459)
..+... +. .....++..|+...+++++||+++||.... ....+..+++++...
T Consensus 203 ~~~~~~-~~------------------~~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~ 263 (398)
T 4fzr_A 203 TKMRYV-PY------------------NGRNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL 263 (398)
T ss_dssp EECCCC-CC------------------CCSSCCCCHHHHSCCSSCEEECC----------------CCSHHHHHHHGGGG
T ss_pred CCeeee-CC------------------CCCCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhC
Confidence 111100 00 001223556776656778999999998643 345688899999999
Q ss_pred CCcEEEEEeCCCCCCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHH
Q 012645 298 EKPFLWVVKENENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAK 377 (459)
Q Consensus 298 ~~~~v~~~~~~~~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~ 377 (459)
+.+++|+.+... .+.+. ..++|+++.+|+|+.++|+++++ ||||||.||+.||+++|+|+|++|...||+.||.
T Consensus 264 ~~~~v~~~~~~~---~~~l~-~~~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~ 337 (398)
T 4fzr_A 264 GFEVVVAVSDKL---AQTLQ-PLPEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQVSVPVIAEVWDSAR 337 (398)
T ss_dssp TCEEEECCCC------------CCTTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSGGGHHHHH
T ss_pred CCEEEEEeCCcc---hhhhc-cCCCcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEEecCCchhHHHHHH
Confidence 999998876532 11111 35789999999999999988777 9999999999999999999999999999999999
Q ss_pred HHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHH
Q 012645 378 FVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKK 431 (459)
Q Consensus 378 rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~ 431 (459)
++++. |+|..+... .++++.|.++|.++|+|+ ++++++++.++++.+
T Consensus 338 ~~~~~-g~g~~~~~~---~~~~~~l~~ai~~ll~~~---~~~~~~~~~~~~~~~ 384 (398)
T 4fzr_A 338 LLHAA-GAGVEVPWE---QAGVESVLAACARIRDDS---SYVGNARRLAAEMAT 384 (398)
T ss_dssp HHHHT-TSEEECC----------CHHHHHHHHHHCT---HHHHHHHHHHHHHTT
T ss_pred HHHHc-CCEEecCcc---cCCHHHHHHHHHHHHhCH---HHHHHHHHHHHHHHc
Confidence 99999 999999877 789999999999999999 999999999998865
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-37 Score=299.93 Aligned_cols=355 Identities=14% Similarity=0.152 Sum_probs=239.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcCCCCCC------------------
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDE------------------ 66 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~------------------ 66 (459)
.+.|||+|++.++.||++|+++||++|+++||+|+++++ .+.+.++..|+.++.++.....
T Consensus 18 ~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (398)
T 3oti_A 18 GRHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAAAGLEVVDVAPDYSAVKVFEQVAKDNPRFAETV 96 (398)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHTTTCEEEESSTTCCHHHHHHHHHHHCHHHHHTG
T ss_pred hhcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHhCCCeeEecCCccCHHHHhhhcccCCccccccc
Confidence 356999999999999999999999999999999999999 8888888899999999743110
Q ss_pred --CCCCCCCCHHHHHHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHh
Q 012645 67 --GGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQI 144 (459)
Q Consensus 67 --~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~ 144 (459)
............+..........+.++++++ +||+||+|...+++..+|+.+|||++.+.....
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-----~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~--------- 162 (398)
T 3oti_A 97 ATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDY-----RPDLVVYEQGATVGLLAADRAGVPAVQRNQSAW--------- 162 (398)
T ss_dssp GGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHHH-----CCSEEEEETTCHHHHHHHHHHTCCEEEECCTTC---------
T ss_pred cCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEECchhhHHHHHHHHcCCCEEEEeccCC---------
Confidence 0001111122222222223333445555554 899999998888899999999999998754320
Q ss_pred hccCCCCCCCCCCCcccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcCCC
Q 012645 145 NHGLLTLPVNQETVPLTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWP 224 (459)
Q Consensus 145 ~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 224 (459)
.......... .. +.....+........+..+....+.+..+ .+ ..
T Consensus 163 ------------------------~~~~~~~~~~-~~----l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~ 207 (398)
T 3oti_A 163 ------------------------RTRGMHRSIA-SF----LTDLMDKHQVSLPEPVATIESFPPSLLLE-----AE-PE 207 (398)
T ss_dssp ------------------------CCTTHHHHHH-TT----CHHHHHHTTCCCCCCSEEECSSCGGGGTT-----SC-CC
T ss_pred ------------------------CccchhhHHH-HH----HHHHHHHcCCCCCCCCeEEEeCCHHHCCC-----CC-CC
Confidence 0000000000 00 11111111111112233333333322210 00 00
Q ss_pred eeeecccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccC--CHHHHHHHHHHHHhCCCcEE
Q 012645 225 LVMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADI--AANQVDEIARGLKASEKPFL 302 (459)
Q Consensus 225 ~~~vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~--~~~~~~~i~~a~~~~~~~~v 302 (459)
...+... +. ..+..+..|+...+++++||+++||.... ..+.+..+++++...+.+++
T Consensus 208 ~~~~~~~-~~-------------------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v 267 (398)
T 3oti_A 208 GWFMRWV-PY-------------------GGGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFV 267 (398)
T ss_dssp SBCCCCC-CC-------------------CCCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEE
T ss_pred CCCcccc-CC-------------------CCCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEE
Confidence 0000000 00 01222445666556778999999998642 56778889999999999999
Q ss_pred EEEeCCCCCCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHH--HHHH
Q 012645 303 WVVKENENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNA--KFVE 380 (459)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na--~rv~ 380 (459)
|+.+... .+.+. ..++|+++.+|+|+.++|+++++ ||||||.||++||+++|+|+|++|...||..|| .+++
T Consensus 268 ~~~g~~~---~~~l~-~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~ 341 (398)
T 3oti_A 268 LALGDLD---ISPLG-TLPRNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVS 341 (398)
T ss_dssp EECTTSC---CGGGC-SCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHH
T ss_pred EEECCcC---hhhhc-cCCCcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHH
Confidence 9877532 12221 35789999999999999988777 999999999999999999999999999999999 9999
Q ss_pred HhhhceEEeeecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012645 381 EVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLL 451 (459)
Q Consensus 381 ~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~ 451 (459)
+. |+|..++.. +.+++.|. ++|+|+ +++++++++++++.+ ..+...+.+.++++.
T Consensus 342 ~~-g~g~~~~~~---~~~~~~l~----~ll~~~---~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~l~ 396 (398)
T 3oti_A 342 RR-GIGLVSTSD---KVDADLLR----RLIGDE---SLRTAAREVREEMVA-----LPTPAETVRRIVERI 396 (398)
T ss_dssp HH-TSEEECCGG---GCCHHHHH----HHHHCH---HHHHHHHHHHHHHHT-----SCCHHHHHHHHHHHH
T ss_pred HC-CCEEeeCCC---CCCHHHHH----HHHcCH---HHHHHHHHHHHHHHh-----CCCHHHHHHHHHHHh
Confidence 99 999999877 78887776 889998 999999999999875 334555555555553
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-35 Score=289.49 Aligned_cols=355 Identities=12% Similarity=0.101 Sum_probs=235.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEc-CCCCC--CCCCC----C-----CCC
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPI-SDGFD--EGGFK----Q-----APS 74 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~-~~~~~--~~~~~----~-----~~~ 74 (459)
+|||+|++.++.||++|++.|+++|+++||+|++++++.+.+.+...|+.++.+ +.... ..... . ...
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHGAGLTTAGIRGNDRTGDTGGTTQLRFPNPAFGQRD 80 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHHBTCEEEEC--------------CCSCCGGGGCTT
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHhCCCceeeecCCccchhhhhhhccccccccccccc
Confidence 599999999999999999999999999999999999988887788889999988 42211 00000 0 000
Q ss_pred HHHHHHHHHHhchHH-------HHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhcc
Q 012645 75 VKAYLESFKTVGSRT-------LAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHG 147 (459)
Q Consensus 75 ~~~~~~~~~~~~~~~-------~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~ 147 (459)
.......+....... +..+.+.+++. +||+||+|...+++..+|+.+|||++.+.....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~------------ 146 (391)
T 3tsa_A 81 TEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAW--RPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVD------------ 146 (391)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHTTCCEEEECCSCC------------
T ss_pred chhHHHHHHHHHHHHhhcchhhHHHHHHHHHhc--CCCEEEeCcchhHHHHHHHHhCCCEEEEecCCc------------
Confidence 011111111111112 33333333333 899999998778888999999999999764331
Q ss_pred CCCCCCCCCCCcccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhccc-----CCceEEEcchhHhhHHHHHHHhcC
Q 012645 148 LLTLPVNQETVPLTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLN-----KNDWVLCNSFEELEKELLRAMLGL 222 (459)
Q Consensus 148 ~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~~~ 222 (459)
.. .... .......+.+....+. ..+..+....++++.. .+.
T Consensus 147 --------------------~~----~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 192 (391)
T 3tsa_A 147 --------------------PT----AGPF-----SDRAHELLDPVCRHHGLTGLPTPELILDPCPPSLQAS-----DAP 192 (391)
T ss_dssp --------------------CT----TTHH-----HHHHHHHHHHHHHHTTSSSSCCCSEEEECSCGGGSCT-----TSC
T ss_pred --------------------cc----cccc-----cchHHHHHHHHHHHcCCCCCCCCceEEEecChhhcCC-----CCC
Confidence 00 0000 0011111222211111 1133444333333210 000
Q ss_pred C--CeeeecccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCccc--CC-HHHHHHHHHHHHhC
Q 012645 223 W--PLVMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMAD--IA-ANQVDEIARGLKAS 297 (459)
Q Consensus 223 ~--~~~~vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~--~~-~~~~~~i~~a~~~~ 297 (459)
. ++.++ |. .....+..|+...+++++|++++||... .. ...+..++++ ...
T Consensus 193 ~~~~~~~~-p~----------------------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~ 248 (391)
T 3tsa_A 193 QGAPVQYV-PY----------------------NGSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TEL 248 (391)
T ss_dssp CCEECCCC-CC----------------------CCCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTS
T ss_pred ccCCeeee-cC----------------------CCCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccC
Confidence 0 01111 00 0012244566655677899999999853 33 6778888888 776
Q ss_pred -CCcEEEEEeCCCCCCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHH
Q 012645 298 -EKPFLWVVKENENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNA 376 (459)
Q Consensus 298 -~~~~v~~~~~~~~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na 376 (459)
+.+++|+.+... .+.+. ..++|+++.+|+|+.++|+++++ ||||||.||++||+++|+|+|++|...||+.|+
T Consensus 249 p~~~~v~~~~~~~---~~~l~-~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a 322 (391)
T 3tsa_A 249 PGVEAVIAVPPEH---RALLT-DLPDNARIAESVPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQLVLPQYFDQFDYA 322 (391)
T ss_dssp TTEEEEEECCGGG---GGGCT-TCCTTEEECCSCCGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSTTHHHHH
T ss_pred CCeEEEEEECCcc---hhhcc-cCCCCEEEeccCCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEEecCCcccHHHHH
Confidence 778888776432 11111 35689999999999999966666 999999999999999999999999999999999
Q ss_pred HHHHHhhhceEEeee--cCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012645 377 KFVEEVWEVGVRAKK--NRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLL 451 (459)
Q Consensus 377 ~rv~~~~G~G~~~~~--~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~ 451 (459)
.++++. |+|..+.. . ..+++.|.+++.++|+|+ +++++++++++.+.+ ..+ ...+.+.++++.
T Consensus 323 ~~~~~~-g~g~~~~~~~~---~~~~~~l~~ai~~ll~~~---~~~~~~~~~~~~~~~----~~~-~~~~~~~i~~~~ 387 (391)
T 3tsa_A 323 RNLAAA-GAGICLPDEQA---QSDHEQFTDSIATVLGDT---GFAAAAIKLSDEITA----MPH-PAALVRTLENTA 387 (391)
T ss_dssp HHHHHT-TSEEECCSHHH---HTCHHHHHHHHHHHHTCT---HHHHHHHHHHHHHHT----SCC-HHHHHHHHHHC-
T ss_pred HHHHHc-CCEEecCcccc---cCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHc----CCC-HHHHHHHHHHHH
Confidence 999999 99999987 6 689999999999999999 999999999998865 344 444445555543
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-34 Score=279.49 Aligned_cols=360 Identities=13% Similarity=0.102 Sum_probs=244.4
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcCCCC------------CCCC----
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGF------------DEGG---- 68 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~------------~~~~---- 68 (459)
..+|||+|++.++.||++|++.||++|+++||+|++++++.+.+.+...|+.++.++... ....
T Consensus 18 ~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (412)
T 3otg_A 18 GRHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRKLGFEPVATGMPVFDGFLAALRIRFDTDSPEGL 97 (412)
T ss_dssp CCSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCEEEECCCCHHHHHHHHHHHHHSCSCCTTC
T ss_pred cceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHhcCCceeecCcccccchhhhhhhhhcccCCccC
Confidence 467999999999999999999999999999999999999887777777899999987410 0000
Q ss_pred --CCCCCCHHHHHHHH-HHhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhh
Q 012645 69 --FKQAPSVKAYLESF-KTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQIN 145 (459)
Q Consensus 69 --~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~ 145 (459)
..........+... .......+.+++++. +||+||+|....++..+|+.+|||+|.+......
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-----~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~--------- 163 (412)
T 3otg_A 98 TPEQLSELPQIVFGRVIPQRVFDELQPVIERL-----RPDLVVQEISNYGAGLAALKAGIPTICHGVGRDT--------- 163 (412)
T ss_dssp CHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHH-----CCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCC---------
T ss_pred ChhHhhHHHHHHHhccchHHHHHHHHHHHHhc-----CCCEEEECchhhHHHHHHHHcCCCEEEecccccC---------
Confidence 00011111111111 111123344455544 8999999987777888999999999987553210
Q ss_pred ccCCCCCCCCCCCcccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhc----------ccCCceEEEcchhHhhHHH
Q 012645 146 HGLLTLPVNQETVPLTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGS----------LNKNDWVLCNSFEELEKEL 215 (459)
Q Consensus 146 ~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~l~~~~ 215 (459)
. ... ...+.+.+.+.... ....+..+..+..+++...
T Consensus 164 ------------------------~---~~~------~~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~i~~~~~~~~~~~ 210 (412)
T 3otg_A 164 ------------------------P---DDL------TRSIEEEVRGLAQRLGLDLPPGRIDGFGNPFIDIFPPSLQEPE 210 (412)
T ss_dssp ------------------------C---SHH------HHHHHHHHHHHHHHTTCCCCSSCCGGGGCCEEECSCGGGSCHH
T ss_pred ------------------------c---hhh------hHHHHHHHHHHHHHcCCCCCcccccCCCCeEEeeCCHHhcCCc
Confidence 0 000 00111111111111 1223445555544444211
Q ss_pred HHHHhcCCCeeeecccCCCccccccccCCccCCCCCCCCChhhhhhh-hccCCCCcEEEEEeCCcccCCHHHHHHHHHHH
Q 012645 216 LRAMLGLWPLVMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRW-LATKPEKSVIYVSFGSMADIAANQVDEIARGL 294 (459)
Q Consensus 216 ~~~~~~~~~~~~vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~-l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~ 294 (459)
.... .....+.+.... ...+...| ....+++++|++++||........+..+++++
T Consensus 211 ~~~~---~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~l 267 (412)
T 3otg_A 211 FRAR---PRRHELRPVPFA--------------------EQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDGL 267 (412)
T ss_dssp HHTC---TTEEECCCCCCC--------------------CCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHHHHHH
T ss_pred ccCC---CCcceeeccCCC--------------------CCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHHHHHH
Confidence 1000 001111111000 01113345 23334667999999999766778888899999
Q ss_pred HhCCCcEEEEEeCCCCCCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhh
Q 012645 295 KASEKPFLWVVKENENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPT 374 (459)
Q Consensus 295 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~ 374 (459)
...+.+++|+.+... ..+.+. ..++|+++.+|+|+.++|+++++ ||+|||.||++||+++|+|+|++|...||..
T Consensus 268 ~~~~~~~~~~~g~~~--~~~~l~-~~~~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G~P~v~~p~~~~q~~ 342 (412)
T 3otg_A 268 AGLDADVLVASGPSL--DVSGLG-EVPANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQLSFPWAGDSFA 342 (412)
T ss_dssp HTSSSEEEEECCSSC--CCTTCC-CCCTTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHHHHTCCEEECCCSTTHHH
T ss_pred HcCCCEEEEEECCCC--Chhhhc-cCCCcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHHHhCCCEEecCCchhHHH
Confidence 988999999887642 112221 25689999999999999988887 9999999999999999999999999999999
Q ss_pred HHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012645 375 NAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLL 451 (459)
Q Consensus 375 na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~ 451 (459)
|+..+++. |+|..+... .++++.|.++|.++++|+ ++++++.+.++++.+ ..+ .+.+.+.++++.
T Consensus 343 ~~~~v~~~-g~g~~~~~~---~~~~~~l~~ai~~ll~~~---~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~l~ 407 (412)
T 3otg_A 343 NAQAVAQA-GAGDHLLPD---NISPDSVSGAAKRLLAEE---SYRAGARAVAAEIAA----MPG-PDEVVRLLPGFA 407 (412)
T ss_dssp HHHHHHHH-TSEEECCGG---GCCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHH----SCC-HHHHHTTHHHHH
T ss_pred HHHHHHHc-CCEEecCcc---cCCHHHHHHHHHHHHhCH---HHHHHHHHHHHHHhc----CCC-HHHHHHHHHHHh
Confidence 99999999 999999987 789999999999999998 999999998888875 243 444444444443
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.4e-30 Score=246.53 Aligned_cols=307 Identities=15% Similarity=0.103 Sum_probs=196.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccc--cccCCCCceEEEcCCC-CCCCC-CCCCCCHHHHHHHHH
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTV--KSIHATTVGVEPISDG-FDEGG-FKQAPSVKAYLESFK 83 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~--~~~~~~g~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~ 83 (459)
.||+|.+.||.||++|.++||++|+++||+|+|++++... +.+.+.|+.++.++.. +.... ..........+..+
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~- 81 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKAGLPLHLIQVSGLRGKGLKSLVKAPLELLKSL- 81 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGGTCCEEECC--------------CHHHHHHHH-
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhhcCCcEEEEECCCcCCCCHHHHHHHHHHHHHHH-
Confidence 4899999999999999999999999999999999987643 3466779999988732 21110 01111111211111
Q ss_pred HhchHHHHHHHHHhhcCCCCccEEEeCCCch--hHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCccc
Q 012645 84 TVGSRTLAEVILKYKDSESPVNCIVYDSLLT--WALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLT 161 (459)
Q Consensus 84 ~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~--~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 161 (459)
.....++++. +||+||++..+. .+..+|+.+|||++......
T Consensus 82 ----~~~~~~l~~~-----~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~n~--------------------------- 125 (365)
T 3s2u_A 82 ----FQALRVIRQL-----RPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQNA--------------------------- 125 (365)
T ss_dssp ----HHHHHHHHHH-----CCSEEEECSSSTHHHHHHHHHHTTCCEEEEECSS---------------------------
T ss_pred ----HHHHHHHHhc-----CCCEEEEcCCcchHHHHHHHHHcCCCEEEEecch---------------------------
Confidence 1233455655 899999886553 35678999999999754322
Q ss_pred CCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcCCCeeeecccCCCccccccc
Q 012645 162 LPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAYLDQQI 241 (459)
Q Consensus 162 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vgp~~~~~~~~~~~ 241 (459)
+||+ . .+... +.++.+.. .+++. .+...+..++|+.+....+..
T Consensus 126 ~~G~--------------------~----nr~l~--~~a~~v~~-~~~~~-------~~~~~k~~~~g~pvr~~~~~~-- 169 (365)
T 3s2u_A 126 VAGT--------------------A----NRSLA--PIARRVCE-AFPDT-------FPASDKRLTTGNPVRGELFLD-- 169 (365)
T ss_dssp SCCH--------------------H----HHHHG--GGCSEEEE-SSTTS-------SCC---CEECCCCCCGGGCCC--
T ss_pred hhhh--------------------H----HHhhc--cccceeee-ccccc-------ccCcCcEEEECCCCchhhccc--
Confidence 2321 0 11111 11222222 22211 111124666775544321100
Q ss_pred cCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhC----CCcEEEEEeCCC-CCCchhh
Q 012645 242 AGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKAS----EKPFLWVVKENE-NKLPVEF 316 (459)
Q Consensus 242 ~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~----~~~~v~~~~~~~-~~~~~~~ 316 (459)
-.......+.++.|++..||.... ...+.+.+++..+ +..++++.+... +...+.
T Consensus 170 -----------------~~~~~~~~~~~~~ilv~gGs~g~~--~~~~~~~~al~~l~~~~~~~vi~~~G~~~~~~~~~~- 229 (365)
T 3s2u_A 170 -----------------AHARAPLTGRRVNLLVLGGSLGAE--PLNKLLPEALAQVPLEIRPAIRHQAGRQHAEITAER- 229 (365)
T ss_dssp -----------------TTSSCCCTTSCCEEEECCTTTTCS--HHHHHHHHHHHTSCTTTCCEEEEECCTTTHHHHHHH-
T ss_pred -----------------hhhhcccCCCCcEEEEECCcCCcc--ccchhhHHHHHhcccccceEEEEecCccccccccce-
Confidence 000111123556899988987642 2334456666653 344566655432 111111
Q ss_pred hhhcCCCceEEeeecHH-HHhcccCccceeccCchhhHHHhhhcCCeeeccccc----cchhhHHHHHHHhhhceEEeee
Q 012645 317 VNSVGETGLVVRWCNQF-EVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQF----SDQPTNAKFVEEVWEVGVRAKK 391 (459)
Q Consensus 317 ~~~~~~~v~v~~~~p~~-~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~----~DQ~~na~rv~~~~G~G~~~~~ 391 (459)
....+.++.+.+|+++. ++++.+|+ +|||+|.+|+.|++++|+|+|++|+. .+|..||+.+++. |+|..+..
T Consensus 230 ~~~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~-G~a~~l~~ 306 (365)
T 3s2u_A 230 YRTVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRS-GAGRLLPQ 306 (365)
T ss_dssp HHHTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTT-TSEEECCT
T ss_pred ecccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHC-CCEEEeec
Confidence 12356789999999986 89988888 99999999999999999999999963 5799999999999 99999988
Q ss_pred cCCCcccHHHHHHHHHHHhcCh
Q 012645 392 NRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 392 ~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
. +++++.|.++|.++++|+
T Consensus 307 ~---~~~~~~L~~~i~~ll~d~ 325 (365)
T 3s2u_A 307 K---STGAAELAAQLSEVLMHP 325 (365)
T ss_dssp T---TCCHHHHHHHHHHHHHCT
T ss_pred C---CCCHHHHHHHHHHHHCCH
Confidence 7 899999999999999998
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.4e-27 Score=204.08 Aligned_cols=163 Identities=27% Similarity=0.483 Sum_probs=141.0
Q ss_pred CChhhhhhhhccCCCCcEEEEEeCCcc-cCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhcCCCceEEeeecH
Q 012645 254 PTGDQCMRWLATKPEKSVIYVSFGSMA-DIAANQVDEIARGLKASEKPFLWVVKENENKLPVEFVNSVGETGLVVRWCNQ 332 (459)
Q Consensus 254 ~~~~~l~~~l~~~~~~~~V~vs~Gs~~-~~~~~~~~~i~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~v~~~~p~ 332 (459)
++++++.+|++..+++++|||++||.. ......+..++++++..+.+++|+.+... ++ ..++|+++.+|+|+
T Consensus 6 ~l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~---~~----~~~~~v~~~~~~~~ 78 (170)
T 2o6l_A 6 PLPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNK---PD----TLGLNTRLYKWIPQ 78 (170)
T ss_dssp CCCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSC---CT----TCCTTEEEESSCCH
T ss_pred CCCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcC---cc----cCCCcEEEecCCCH
Confidence 467889999987767789999999986 35677888899999988899999886431 11 24678999999999
Q ss_pred HHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcC
Q 012645 333 FEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDG 412 (459)
Q Consensus 333 ~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~ 412 (459)
.+++.|+.+++||||||+||++||+++|+|+|++|...||..||.++++. |+|..++.. +++++.|.++|.++++|
T Consensus 79 ~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~-g~g~~~~~~---~~~~~~l~~~i~~ll~~ 154 (170)
T 2o6l_A 79 NDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKAR-GAAVRVDFN---TMSSTDLLNALKRVIND 154 (170)
T ss_dssp HHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTT-TSEEECCTT---TCCHHHHHHHHHHHHHC
T ss_pred HHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHc-CCeEEeccc---cCCHHHHHHHHHHHHcC
Confidence 99997777777999999999999999999999999999999999999999 999999876 78999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHH
Q 012645 413 ERSQKIKRNVSKWREFAK 430 (459)
Q Consensus 413 ~~~~~~~~~a~~l~~~~~ 430 (459)
+ +|+++++++++.++
T Consensus 155 ~---~~~~~a~~~~~~~~ 169 (170)
T 2o6l_A 155 P---SYKENVMKLSRIQH 169 (170)
T ss_dssp H---HHHHHHHHHC----
T ss_pred H---HHHHHHHHHHHHhh
Confidence 8 99999999998875
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.4e-20 Score=182.12 Aligned_cols=301 Identities=13% Similarity=0.069 Sum_probs=190.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccc--cccCCCCceEEEcCCC-CCCCCCCCCCCHHHHHHHHHH
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTV--KSIHATTVGVEPISDG-FDEGGFKQAPSVKAYLESFKT 84 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~--~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 84 (459)
|||++++.+..||..+++.||++|+++||+|++++..... ..+...|+.++.++.. +.. ......+.....
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~------~~~~~~~~~~~~ 80 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHGIEIDFIRISGLRG------KGIKALIAAPLR 80 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGGTCEEEECCCCCCTT------CCHHHHHTCHHH
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhccccCCceEEecCCccCc------CccHHHHHHHHH
Confidence 8999999888899999999999999999999999986532 3345568888877632 111 111111111111
Q ss_pred h--chHHHHHHHHHhhcCCCCccEEEeCCCc--hhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCcc
Q 012645 85 V--GSRTLAEVILKYKDSESPVNCIVYDSLL--TWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPL 160 (459)
Q Consensus 85 ~--~~~~~~~l~~~~~~~~~~~Dlvi~D~~~--~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 160 (459)
. ....+..++++. +||+|+++... ..+..+++.+|+|++......
T Consensus 81 ~~~~~~~l~~~l~~~-----~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~-------------------------- 129 (364)
T 1f0k_A 81 IFNAWRQARAIMKAY-----KPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNG-------------------------- 129 (364)
T ss_dssp HHHHHHHHHHHHHHH-----CCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSS--------------------------
T ss_pred HHHHHHHHHHHHHhc-----CCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCC--------------------------
Confidence 0 112234444444 89999998643 346677889999998654321
Q ss_pred cCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcCCCeeeecccCCCcccccc
Q 012645 161 TLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAYLDQQ 240 (459)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vgp~~~~~~~~~~ 240 (459)
.|+ .. .+.. .+..+.+++.+... + +++..+|+.+....+
T Consensus 130 -~~~--------------------~~----~~~~--~~~~d~v~~~~~~~--------~---~~~~~i~n~v~~~~~--- 168 (364)
T 1f0k_A 130 -IAG--------------------LT----NKWL--AKIATKVMQAFPGA--------F---PNAEVVGNPVRTDVL--- 168 (364)
T ss_dssp -SCC--------------------HH----HHHH--TTTCSEEEESSTTS--------S---SSCEECCCCCCHHHH---
T ss_pred -CCc--------------------HH----HHHH--HHhCCEEEecChhh--------c---CCceEeCCccchhhc---
Confidence 100 00 1111 12345555543221 1 134455543322100
Q ss_pred ccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhC--CCcEEEEEeCCCCCCchhhhh
Q 012645 241 IAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKAS--EKPFLWVVKENENKLPVEFVN 318 (459)
Q Consensus 241 ~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~--~~~~v~~~~~~~~~~~~~~~~ 318 (459)
.+.. ....+...++++.|++..|+... ......+++++..+ +.+++++++... .+.+.+
T Consensus 169 ------------~~~~--~~~~~~~~~~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~~~---~~~l~~ 229 (364)
T 1f0k_A 169 ------------ALPL--PQQRLAGREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKGS---QQSVEQ 229 (364)
T ss_dssp ------------TSCC--HHHHHTTCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTTC---HHHHHH
T ss_pred ------------ccch--hhhhcccCCCCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcCCch---HHHHHH
Confidence 0000 11122222344567777788753 33445555666554 455566666532 122221
Q ss_pred ---hcC-CCceEEeeecH-HHHhcccCccceeccCchhhHHHhhhcCCeeeccccc---cchhhHHHHHHHhhhceEEee
Q 012645 319 ---SVG-ETGLVVRWCNQ-FEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQF---SDQPTNAKFVEEVWEVGVRAK 390 (459)
Q Consensus 319 ---~~~-~~v~v~~~~p~-~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~---~DQ~~na~rv~~~~G~G~~~~ 390 (459)
..+ ++|.+.+|+++ ..+++.+++ +|+++|.+++.||+++|+|+|+.|.. .||..|+..+.+. |.|..++
T Consensus 230 ~~~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~-g~g~~~~ 306 (364)
T 1f0k_A 230 AYAEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKA-GAAKIIE 306 (364)
T ss_dssp HHHHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHT-TSEEECC
T ss_pred HHhhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhC-CcEEEec
Confidence 122 58999999954 589988888 99999999999999999999999987 7999999999999 9999888
Q ss_pred ecCCCcccHHHHHHHHHHHhcCh
Q 012645 391 KNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 391 ~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
.. +.+++.|.++|.++ |+
T Consensus 307 ~~---d~~~~~la~~i~~l--~~ 324 (364)
T 1f0k_A 307 QP---QLSVDAVANTLAGW--SR 324 (364)
T ss_dssp GG---GCCHHHHHHHHHTC--CH
T ss_pred cc---cCCHHHHHHHHHhc--CH
Confidence 66 67799999999988 65
|
| >3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=3.5e-16 Score=143.71 Aligned_cols=260 Identities=15% Similarity=0.094 Sum_probs=163.0
Q ss_pred cEEEEEcCC----CccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcCCCCCCCCCCCCCCHHHHHHHHH
Q 012645 8 VHVLVLTYP----AQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDEGGFKQAPSVKAYLESFK 83 (459)
Q Consensus 8 ~kil~~~~~----~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (459)
|||+|.+-+ +.||+.+++.||++|+ +|+|++.....+.++..|+....++.. +.
T Consensus 1 mki~ir~Da~~~IG~GHvmRcl~LA~~l~----~v~F~~~~~~~~~~~~~g~~v~~l~~~----------d~-------- 58 (282)
T 3hbm_A 1 MKVLFRSDSSSQIGFGHIKRDLVLAKQYS----DVSFACLPLEGSLIDEIPYPVYELSSE----------SI-------- 58 (282)
T ss_dssp CCEEEEECCBTTTBSHHHHHHHHHHTTCS----SEEEEECCCTTCCGGGCCSCEEECSSS----------CH--------
T ss_pred CEEEEEEecCCCccccHHHHHHHHHHHHH----hCEEEEecCcHhHHHHCCCeEEEcCcc----------CH--------
Confidence 678888754 8999999999999997 899999765555555557777777521 11
Q ss_pred HhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHH--HHHH-cCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCcc
Q 012645 84 TVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALD--VARQ-FGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPL 160 (459)
Q Consensus 84 ~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~--~a~~-lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 160 (459)
..+.+++++. ++|+||.|........ ..+. .+++.+.+.-..
T Consensus 59 ----~~~~~~l~~~-----~~d~lIvD~Y~~~~~~~~~lk~~~~~~i~~iDD~~-------------------------- 103 (282)
T 3hbm_A 59 ----YELINLIKEE-----KFELLIIDHYGISVDDEKLIKLETGVKILSFDDEI-------------------------- 103 (282)
T ss_dssp ----HHHHHHHHHH-----TCSEEEEECTTCCHHHHHHHHHHHCCEEEEECSSC--------------------------
T ss_pred ----HHHHHHHHhC-----CCCEEEEECCCCCHHHHHHHHHhcCcEEEEEecCC--------------------------
Confidence 1233444444 8999999987754333 2223 577877653210
Q ss_pred cCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhc-CC--CeeeecccCCCccc
Q 012645 161 TLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLG-LW--PLVMIGPLVPSAYL 237 (459)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~--~~~~vgp~~~~~~~ 237 (459)
.. ..+|.++-.+...-.. .+.. .+ -..+.||-...
T Consensus 104 ---------~~--------------------------~~~Dllin~~~~~~~~----~Y~~~~p~~~~~l~G~~Y~~--- 141 (282)
T 3hbm_A 104 ---------KP--------------------------HHCDILLNVNAYAKAS----DYEGLVPFKCEVRCGFSYAL--- 141 (282)
T ss_dssp ---------CC--------------------------CCCSEEEECSTTCCGG----GGTTTCC-CCEEEESGGGCC---
T ss_pred ---------Cc--------------------------ccCCEEEeCCcccchh----hccccCCCCCeEeeCCcccc---
Confidence 00 0122222222110000 0010 01 14456762111
Q ss_pred cccccCCccCCCCCCCCChhhhhhhh-ccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhh
Q 012645 238 DQQIAGDSAYGANIWEPTGDQCMRWL-ATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENENKLPVEF 316 (459)
Q Consensus 238 ~~~~~~~~~~g~~~~~~~~~~l~~~l-~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~~~~~~~~ 316 (459)
+.++....- ...++.+.|+|++|..... .....+++++.... ++.++.+.. ....+.+
T Consensus 142 -----------------lR~eF~~~~~~~r~~~~~ILv~~GG~d~~--~l~~~vl~~L~~~~-~i~vv~G~~-~~~~~~l 200 (282)
T 3hbm_A 142 -----------------IREEFYQEAKENRKKKYDFFICMGGTDIK--NLSLQIASELPKTK-IISIATSSS-NPNLKKL 200 (282)
T ss_dssp -----------------CCHHHHHHTTCCCCCCEEEEEECCSCCTT--CHHHHHHHHSCTTS-CEEEEECTT-CTTHHHH
T ss_pred -----------------cCHHHHHhhhhccccCCeEEEEECCCchh--hHHHHHHHHhhcCC-CEEEEECCC-chHHHHH
Confidence 111111110 0122356899999986432 35566778877654 566666554 2222333
Q ss_pred hhh--cCCCceEEeeecHH-HHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeee
Q 012645 317 VNS--VGETGLVVRWCNQF-EVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKK 391 (459)
Q Consensus 317 ~~~--~~~~v~v~~~~p~~-~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~ 391 (459)
.+. ..+|+.+..|+++. ++++.+++ +|++|| +|+.|+++.|+|+|++|...+|..||..+++. |++..+..
T Consensus 201 ~~~~~~~~~v~v~~~~~~m~~~m~~aDl--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~~-G~~~~~~~ 274 (282)
T 3hbm_A 201 QKFAKLHNNIRLFIDHENIAKLMNESNK--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAKK-GYEVEYKY 274 (282)
T ss_dssp HHHHHTCSSEEEEESCSCHHHHHHTEEE--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHHT-TCEEECGG
T ss_pred HHHHhhCCCEEEEeCHHHHHHHHHHCCE--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHC-CCEEEcch
Confidence 221 13589999999888 79988888 999999 89999999999999999999999999999999 99988875
|
| >2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A | Back alignment and structure |
|---|
Probab=99.59 E-value=1.7e-15 Score=133.38 Aligned_cols=131 Identities=15% Similarity=0.140 Sum_probs=92.9
Q ss_pred CCCcEEEEEeCCcccCCHHHHHHH-----HHHHHhCC-CcEEEEEeCCCCCCchhhhhhc---------C----------
Q 012645 267 PEKSVIYVSFGSMADIAANQVDEI-----ARGLKASE-KPFLWVVKENENKLPVEFVNSV---------G---------- 321 (459)
Q Consensus 267 ~~~~~V~vs~Gs~~~~~~~~~~~i-----~~a~~~~~-~~~v~~~~~~~~~~~~~~~~~~---------~---------- 321 (459)
+++++|||+.||.... .+.+..+ ++++...+ .+++++++.............. |
T Consensus 26 ~~~~~VlVtgGS~~~~-n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~ 104 (224)
T 2jzc_A 26 IEEKALFVTCGATVPF-PKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSSEFEHLVQERGGQRESQKIPIDQFGCGDTA 104 (224)
T ss_dssp CCSCCEEEECCSCCSC-HHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCCCCCSHHHHHTCEECSCCCSSCTTCTTCSC
T ss_pred CCCCEEEEEcCCchHH-HHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchhhHHHHHHhhhccccccccccccccccccc
Confidence 4567999999997422 3333333 47787777 7888888764310111111011 1
Q ss_pred -------C--CceEEeeecHH-HHhc-ccCccceeccCchhhHHHhhhcCCeeeccccc----cchhhHHHHHHHhhhce
Q 012645 322 -------E--TGLVVRWCNQF-EVLA-HQAVGCFITHCGWNSILEGLSLGVAVVAVPQF----SDQPTNAKFVEEVWEVG 386 (459)
Q Consensus 322 -------~--~v~v~~~~p~~-~lL~-~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~----~DQ~~na~rv~~~~G~G 386 (459)
. ++.+.+|+++. ++|+ .+++ +|||||.||++|++++|+|+|++|.. .||..||+++++. |+|
T Consensus 105 ~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~-G~~ 181 (224)
T 2jzc_A 105 RQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVEL-GYV 181 (224)
T ss_dssp EEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHH-SCC
T ss_pred cccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHC-CCE
Confidence 2 34455787776 8998 8888 99999999999999999999999974 3699999999999 998
Q ss_pred EEeeecCCCcccHHHHHHHHHHH
Q 012645 387 VRAKKNRAGIVTGEELNKCVNEV 409 (459)
Q Consensus 387 ~~~~~~~~~~~~~~~l~~~i~~l 409 (459)
..+ +++.|.++|.++
T Consensus 182 ~~~--------~~~~L~~~i~~l 196 (224)
T 2jzc_A 182 WSC--------APTETGLIAGLR 196 (224)
T ss_dssp CEE--------CSCTTTHHHHHH
T ss_pred EEc--------CHHHHHHHHHHH
Confidence 654 345566677666
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=3e-11 Score=119.33 Aligned_cols=375 Identities=13% Similarity=0.074 Sum_probs=189.7
Q ss_pred CCCcEEEEEcC-----------CCccCHHHHHHHHHHHHhCCCeEEEEecCccccc--c--CCCCceEEEcCCCCCCCCC
Q 012645 5 RERVHVLVLTY-----------PAQGHINPLLQFAKRLASKRVKATLATTHYTVKS--I--HATTVGVEPISDGFDEGGF 69 (459)
Q Consensus 5 ~~~~kil~~~~-----------~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~--~--~~~g~~~~~~~~~~~~~~~ 69 (459)
++.|||++++. ...|+-.....|+++|.++||+|++++....... . ...|+.++.++.......
T Consensus 18 ~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~- 96 (438)
T 3c48_A 18 GSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPYEGL- 96 (438)
T ss_dssp -CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEEEEETTEEEEEECCSCSSSC-
T ss_pred cchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcccccccCCeEEEEecCCCcccc-
Confidence 45689999995 2367788899999999999999999987643211 1 125788777763211100
Q ss_pred CCCCCHHHHHHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCch--hHHHHHHHcCCceEEEccchHHHHHHHHHhhcc
Q 012645 70 KQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLT--WALDVARQFGIYGAAMMTNSASVCSMYWQINHG 147 (459)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~--~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~ 147 (459)
........+..+. ...++..++.. .+||+|++..... .+..+++.+|+|+|...+......
T Consensus 97 -~~~~~~~~~~~~~---~~~~~~~~~~~----~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~--------- 159 (438)
T 3c48_A 97 -SKEELPTQLAAFT---GGMLSFTRREK----VTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVK--------- 159 (438)
T ss_dssp -CGGGGGGGHHHHH---HHHHHHHHHHT----CCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHHHH---------
T ss_pred -chhHHHHHHHHHH---HHHHHHHHhcc----CCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCcccc---------
Confidence 0011111111111 11111112221 1499999875332 244567788999998766542110
Q ss_pred CCCCCCCCCCCcccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHh-cCCCee
Q 012645 148 LLTLPVNQETVPLTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAML-GLWPLV 226 (459)
Q Consensus 148 ~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~ 226 (459)
... +...... .......+.+ ..+..++.+++.+-...+. ....+. ...++.
T Consensus 160 --------------~~~---~~~~~~~--------~~~~~~~~~~--~~~~~~d~ii~~s~~~~~~-~~~~~g~~~~k~~ 211 (438)
T 3c48_A 160 --------------NSY---RDDSDTP--------ESEARRICEQ--QLVDNADVLAVNTQEEMQD-LMHHYDADPDRIS 211 (438)
T ss_dssp --------------SCC-------CCH--------HHHHHHHHHH--HHHHHCSEEEESSHHHHHH-HHHHHCCCGGGEE
T ss_pred --------------ccc---ccccCCc--------chHHHHHHHH--HHHhcCCEEEEcCHHHHHH-HHHHhCCChhheE
Confidence 000 0000000 0001111111 1234577888777654432 111111 111344
Q ss_pred eecccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCccc-CCHHHHHHHHHHHHh-C---CCcE
Q 012645 227 MIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMAD-IAANQVDEIARGLKA-S---EKPF 301 (459)
Q Consensus 227 ~vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~-~~~~~~~~i~~a~~~-~---~~~~ 301 (459)
.+...+....+... .....+.+..-+.-. ++..+++..|+... -..+.+-..+..+.. . +.++
T Consensus 212 vi~ngvd~~~~~~~-----------~~~~~~~~r~~~~~~-~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~~~~~l 279 (438)
T 3c48_A 212 VVSPGADVELYSPG-----------NDRATERSRRELGIP-LHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRV 279 (438)
T ss_dssp ECCCCCCTTTSCCC---------------CHHHHHHTTCC-SSSEEEEEESCBSGGGCHHHHHHHHHHHHHHCTTCSEEE
T ss_pred EecCCccccccCCc-----------ccchhhhhHHhcCCC-CCCcEEEEEeeecccCCHHHHHHHHHHHHhhCCCcceEE
Confidence 44433332110000 000001133333221 23367778888653 222333233333322 2 2344
Q ss_pred EEEEeCCC-CCCchhhh---hh--cCCCceEEeeecHH---HHhcccCccceecc----CchhhHHHhhhcCCeeecccc
Q 012645 302 LWVVKENE-NKLPVEFV---NS--VGETGLVVRWCNQF---EVLAHQAVGCFITH----CGWNSILEGLSLGVAVVAVPQ 368 (459)
Q Consensus 302 v~~~~~~~-~~~~~~~~---~~--~~~~v~v~~~~p~~---~lL~~~~~~~~I~H----GG~gs~~eal~~GvP~li~P~ 368 (459)
+++..... +...+.+. .. ..++|.+.+++|+. .+++.+++ +|.- |...++.||+++|+|+|+.+.
T Consensus 280 ~i~G~~~~~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~ 357 (438)
T 3c48_A 280 IICGGPSGPNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQASGTPVIAARV 357 (438)
T ss_dssp EEECCBC------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHHTTCCEEEESC
T ss_pred EEEeCCCCCCcHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHHcCCCEEecCC
Confidence 44332100 11112222 11 35789999999864 67878888 7654 334689999999999998753
Q ss_pred ccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcChh-hHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHH
Q 012645 369 FSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGER-SQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFV 447 (459)
Q Consensus 369 ~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~-~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~ 447 (459)
......++.. +.|..++ .-+++++.++|.++++|++ .+.+.+++++..+.+.- ......+.++.
T Consensus 358 ----~~~~e~i~~~-~~g~~~~-----~~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~s~-----~~~~~~~~~~~ 422 (438)
T 3c48_A 358 ----GGLPIAVAEG-ETGLLVD-----GHSPHAWADALATLLDDDETRIRMGEDAVEHARTFSW-----AATAAQLSSLY 422 (438)
T ss_dssp ----TTHHHHSCBT-TTEEEES-----SCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHH
T ss_pred ----CChhHHhhCC-CcEEECC-----CCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhCCH-----HHHHHHHHHHH
Confidence 3455555556 6787765 4578999999999999873 23455666666555332 12234455666
Q ss_pred HHHHHhc
Q 012645 448 VRLLKAD 454 (459)
Q Consensus 448 ~~l~~~~ 454 (459)
+.+....
T Consensus 423 ~~~~~~~ 429 (438)
T 3c48_A 423 NDAIANE 429 (438)
T ss_dssp HHHHHTC
T ss_pred HHHhhhc
Confidence 6665544
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=4.8e-11 Score=115.94 Aligned_cols=309 Identities=13% Similarity=0.073 Sum_probs=171.6
Q ss_pred CCCcEEEEEcC--C--CccCHHHHHHHHHHHHhCCCeEEEEecCcccc----ccCCCCceEEEcCCCCCCCCCCCCCCHH
Q 012645 5 RERVHVLVLTY--P--AQGHINPLLQFAKRLASKRVKATLATTHYTVK----SIHATTVGVEPISDGFDEGGFKQAPSVK 76 (459)
Q Consensus 5 ~~~~kil~~~~--~--~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 76 (459)
|++|||++++. + ..|.-.-+..+++.| +||+|++++...... .....++.+..++..... ...
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~- 72 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYDKTLDYEVIRWPRSVML------PTP- 72 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHHTTCSSEEEEESSSSCC------SCH-
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhccccceEEEEccccccc------cch-
Confidence 35699999985 3 467778889999999 799999999875532 223458888887642111 111
Q ss_pred HHHHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCch--hHHHHHHHcCCceEE-EccchHHHHHHHHHhhccCCCCCC
Q 012645 77 AYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLT--WALDVARQFGIYGAA-MMTNSASVCSMYWQINHGLLTLPV 153 (459)
Q Consensus 77 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~--~~~~~a~~lgiP~v~-~~~~~~~~~~~~~~~~~~~~~~p~ 153 (459)
.....+..++++. +||+|++..... ....+++.+|+|.+. ..+......
T Consensus 73 --------~~~~~l~~~~~~~-----~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~--------------- 124 (394)
T 3okp_A 73 --------TTAHAMAEIIRER-----EIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGW--------------- 124 (394)
T ss_dssp --------HHHHHHHHHHHHT-----TCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHHH---------------
T ss_pred --------hhHHHHHHHHHhc-----CCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhhh---------------
Confidence 1112344455554 899999765442 345567889998544 333221000
Q ss_pred CCCCCcccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcCCCeeeecccCC
Q 012645 154 NQETVPLTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVP 233 (459)
Q Consensus 154 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vgp~~~ 233 (459)
..........+.. +..++.+++.+-...+. .........++..+.+.+.
T Consensus 125 ---------------------------~~~~~~~~~~~~~---~~~~d~ii~~s~~~~~~-~~~~~~~~~~~~vi~ngv~ 173 (394)
T 3okp_A 125 ---------------------------SMLPGSRQSLRKI---GTEVDVLTYISQYTLRR-FKSAFGSHPTFEHLPSGVD 173 (394)
T ss_dssp ---------------------------TTSHHHHHHHHHH---HHHCSEEEESCHHHHHH-HHHHHCSSSEEEECCCCBC
T ss_pred ---------------------------hhcchhhHHHHHH---HHhCCEEEEcCHHHHHH-HHHhcCCCCCeEEecCCcC
Confidence 0001111122221 24567777777654432 2222211123444443332
Q ss_pred CccccccccCCccCCCCCCCC-Ch---hhhhhhhccCCCCcEEEEEeCCccc-CCHHHHHHHHHHHHh--CCCcEEEEEe
Q 012645 234 SAYLDQQIAGDSAYGANIWEP-TG---DQCMRWLATKPEKSVIYVSFGSMAD-IAANQVDEIARGLKA--SEKPFLWVVK 306 (459)
Q Consensus 234 ~~~~~~~~~~~~~~g~~~~~~-~~---~~l~~~l~~~~~~~~V~vs~Gs~~~-~~~~~~~~i~~a~~~--~~~~~v~~~~ 306 (459)
.. ...+ .+ ..+.+.+.- +++..+++..|+... -..+.+-..+..+.. .+.+++++..
T Consensus 174 ~~---------------~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~ 237 (394)
T 3okp_A 174 VK---------------RFTPATPEDKSATRKKLGF-TDTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVGS 237 (394)
T ss_dssp TT---------------TSCCCCHHHHHHHHHHTTC-CTTCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEEECC
T ss_pred HH---------------HcCCCCchhhHHHHHhcCC-CcCceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEcC
Confidence 21 0111 11 223333322 233367777888643 223333333333322 2455555433
Q ss_pred CCCCCCchhhh---hhcCCCceEEeeecHH---HHhcccCccceec-----------cCchhhHHHhhhcCCeeeccccc
Q 012645 307 ENENKLPVEFV---NSVGETGLVVRWCNQF---EVLAHQAVGCFIT-----------HCGWNSILEGLSLGVAVVAVPQF 369 (459)
Q Consensus 307 ~~~~~~~~~~~---~~~~~~v~v~~~~p~~---~lL~~~~~~~~I~-----------HGG~gs~~eal~~GvP~li~P~~ 369 (459)
+ ...+.+. ....++|.+.+++|+. .+++.+++ +|. -|...++.||+++|+|+|+.+..
T Consensus 238 g---~~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~ 312 (394)
T 3okp_A 238 G---RYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSG 312 (394)
T ss_dssp C---TTHHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSST
T ss_pred c---hHHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHHHcCCCEEEeCCC
Confidence 2 2212221 2345789999999765 47877887 776 55667999999999999997753
Q ss_pred cchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcCh
Q 012645 370 SDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 370 ~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
.-+ .+... |.|..++ .-+++++.++|.++++|+
T Consensus 313 ~~~-----e~i~~-~~g~~~~-----~~d~~~l~~~i~~l~~~~ 345 (394)
T 3okp_A 313 GAP-----ETVTP-ATGLVVE-----GSDVDKLSELLIELLDDP 345 (394)
T ss_dssp TGG-----GGCCT-TTEEECC-----TTCHHHHHHHHHHHHTCH
T ss_pred ChH-----HHHhc-CCceEeC-----CCCHHHHHHHHHHHHhCH
Confidence 211 12234 5565555 457999999999999987
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=6e-11 Score=116.97 Aligned_cols=379 Identities=14% Similarity=0.092 Sum_probs=188.8
Q ss_pred CCcEEEEEcCC-----CccCHHHHHHHHHHHHhCCCeEEEEecCcccccc--------------------CCCCceEEEc
Q 012645 6 ERVHVLVLTYP-----AQGHINPLLQFAKRLASKRVKATLATTHYTVKSI--------------------HATTVGVEPI 60 (459)
Q Consensus 6 ~~~kil~~~~~-----~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~--------------------~~~g~~~~~~ 60 (459)
++|||++++.. ..|--.-+..||++|+++||+|+++++......- ...|+.++.+
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 80 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRI 80 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEe
Confidence 57999999842 3454556889999999999999999965332210 2357777777
Q ss_pred CCCCCCCCCCCCCCHHHH-HHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCchh--HHHHHHHcCCceEEEccchHHH
Q 012645 61 SDGFDEGGFKQAPSVKAY-LESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTW--ALDVARQFGIYGAAMMTNSASV 137 (459)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~--~~~~a~~lgiP~v~~~~~~~~~ 137 (459)
+..+-.. .......... ...+... ...+..+++.+.....+||+|.+...... +..+++..|+|+|...+....
T Consensus 81 ~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~- 157 (439)
T 3fro_A 81 GGGLLDS-EDVYGPGWDGLIRKAVTF-GRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYFKIPAVFTIHRLNK- 157 (439)
T ss_dssp ESGGGGC-SSTTCSHHHHHHHHHHHH-HHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHHHCCCEEEEESCCCC-
T ss_pred cchhccc-cccccCCcchhhhhhHHH-HHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhccCCCEEEEeccccc-
Confidence 6411000 0011111111 2222111 22333444444222348999998765432 456667889999987664410
Q ss_pred HHHHHHhhccCCCCCCCCCCCcccCCCCCC--CCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHH
Q 012645 138 CSMYWQINHGLLTLPVNQETVPLTLPGLPS--LASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKEL 215 (459)
Q Consensus 138 ~~~~~~~~~~~~~~p~~~~~~~~~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 215 (459)
..++. .....+.... ........+. .+..++.+++.+-...+. .
T Consensus 158 -------------------------~~~~~~~~~~~~~~~~~--~~~~~~~~~~------~~~~ad~ii~~S~~~~~~-~ 203 (439)
T 3fro_A 158 -------------------------SKLPAFYFHEAGLSELA--PYPDIDPEHT------GGYIADIVTTVSRGYLID-E 203 (439)
T ss_dssp -------------------------CCEEHHHHHHTTCGGGC--CSSEECHHHH------HHHHCSEEEESCHHHHHH-T
T ss_pred -------------------------ccCchHHhCcccccccc--ccceeeHhhh------hhhhccEEEecCHHHHHH-H
Confidence 00000 0000000000 0000011111 123467777766554333 1
Q ss_pred HHHHh-cCCCeeeecccCCCcccccc-ccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcc-c-CCHHHHHHHH
Q 012645 216 LRAML-GLWPLVMIGPLVPSAYLDQQ-IAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMA-D-IAANQVDEIA 291 (459)
Q Consensus 216 ~~~~~-~~~~~~~vgp~~~~~~~~~~-~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~-~-~~~~~~~~i~ 291 (459)
...+. ...++..+..-+....+... .+.. .......+.+-+.-. ++ .+++..|+.. . -..+.+-..+
T Consensus 204 ~~~~~~~~~~i~vi~ngvd~~~~~~~~~~~~-------~~~~~~~~~~~~~~~-~~-~~i~~~G~~~~~~Kg~~~li~a~ 274 (439)
T 3fro_A 204 WGFFRNFEGKITYVFNGIDCSFWNESYLTGS-------RDERKKSLLSKFGMD-EG-VTFMFIGRFDRGQKGVDVLLKAI 274 (439)
T ss_dssp HHHHGGGTTSEEECCCCCCTTTSCGGGSCSC-------HHHHHHHHHHHHTCC-SC-EEEEEECCSSCTTBCHHHHHHHH
T ss_pred hhhhhhcCCceeecCCCCCchhcCcccccch-------hhhhHHHHHHHcCCC-CC-cEEEEEcccccccccHHHHHHHH
Confidence 11111 11244444433322111000 0000 000112233333322 33 7888888876 3 3344444444
Q ss_pred HHHHh----CCCcEEEEEeCCCCCCchhh---hhhcCCCceEEeeecHH---HHhcccCccceecc----CchhhHHHhh
Q 012645 292 RGLKA----SEKPFLWVVKENENKLPVEF---VNSVGETGLVVRWCNQF---EVLAHQAVGCFITH----CGWNSILEGL 357 (459)
Q Consensus 292 ~a~~~----~~~~~v~~~~~~~~~~~~~~---~~~~~~~v~v~~~~p~~---~lL~~~~~~~~I~H----GG~gs~~eal 357 (459)
..+.. .+.+++++ +.......+.+ ....++++.+.+|+|+. .+++.+++ +|.- |-..++.||+
T Consensus 275 ~~l~~~~~~~~~~l~i~-G~g~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAm 351 (439)
T 3fro_A 275 EILSSKKEFQEMRFIII-GKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAM 351 (439)
T ss_dssp HHHHTSGGGGGEEEEEE-CCCCHHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSE--EEECBSCCSSCHHHHHHH
T ss_pred HHHHhcccCCCeEEEEE-cCCChhHHHHHHHHHhhcCCEEEEcCCCCHHHHHHHHHHCCE--EEeCCCCCCccHHHHHHH
Confidence 44443 23444443 32210000111 12234445556889876 46877777 6632 3447999999
Q ss_pred hcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhc-Chh-hHHHHHHHHHHHHHHHHHHhc
Q 012645 358 SLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMD-GER-SQKIKRNVSKWREFAKKAVSA 435 (459)
Q Consensus 358 ~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~-~~~-~~~~~~~a~~l~~~~~~~~~~ 435 (459)
++|+|+|+.... . ...+.+. |.|..++ .-+++++.++|.++++ |++ .+.+.+++++..+.
T Consensus 352 a~G~Pvi~s~~~----~-~~e~~~~-~~g~~~~-----~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~------- 413 (439)
T 3fro_A 352 CLGAIPIASAVG----G-LRDIITN-ETGILVK-----AGDPGELANAILKALELSRSDLSKFRENCKKRAMS------- 413 (439)
T ss_dssp HTTCEEEEESST----H-HHHHCCT-TTCEEEC-----TTCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHT-------
T ss_pred HCCCCeEEcCCC----C-cceeEEc-CceEEeC-----CCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhh-------
Confidence 999999987542 2 2334446 7777776 4689999999999998 652 23455555544432
Q ss_pred CCCcHHHHHHHHHHHHH
Q 012645 436 GGSSDKNIDEFVVRLLK 452 (459)
Q Consensus 436 ~g~s~~~~~~~~~~l~~ 452 (459)
-+....++.+++-+.+
T Consensus 414 -~s~~~~~~~~~~~~~~ 429 (439)
T 3fro_A 414 -FSWEKSAERYVKAYTG 429 (439)
T ss_dssp -SCHHHHHHHHHHHHHT
T ss_pred -CcHHHHHHHHHHHHHH
Confidence 4434555555544443
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.42 E-value=5.8e-12 Score=121.95 Aligned_cols=129 Identities=16% Similarity=0.214 Sum_probs=83.3
Q ss_pred CCcEEEEEeCCcccCCHHHHHHHHHHHHh-----CCCcEEEEEeCCCCCCchhhhhh--cCCCceEEeeecH---HHHhc
Q 012645 268 EKSVIYVSFGSMADIAANQVDEIARGLKA-----SEKPFLWVVKENENKLPVEFVNS--VGETGLVVRWCNQ---FEVLA 337 (459)
Q Consensus 268 ~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~-----~~~~~v~~~~~~~~~~~~~~~~~--~~~~v~v~~~~p~---~~lL~ 337 (459)
+++.|+++.|...... .+..+++++.. .+..+++..+.. ..+.+.+.+. ..++|++.+++++ ..+++
T Consensus 197 ~~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~-~~~~~~l~~~~~~~~~v~~~g~~g~~~~~~~~~ 273 (376)
T 1v4v_A 197 EGPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLN-PVVREAVFPVLKGVRNFVLLDPLEYGSMAALMR 273 (376)
T ss_dssp SSCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSC-HHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHH
T ss_pred CCCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCC-HHHHHHHHHHhccCCCEEEECCCCHHHHHHHHH
Confidence 3457777777653322 34556666544 244555443321 1111222211 1358888865554 48897
Q ss_pred ccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcCh
Q 012645 338 HQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 338 ~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
.+++ ||+.+| |.+.||+++|+|+|+.+...+++. +.+. |.|..+. .+++.|.+++.++++|+
T Consensus 274 ~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~----~~~~-g~g~lv~------~d~~~la~~i~~ll~d~ 335 (376)
T 1v4v_A 274 ASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPE----GLKA-GILKLAG------TDPEGVYRVVKGLLENP 335 (376)
T ss_dssp TEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHH----HHHH-TSEEECC------SCHHHHHHHHHHHHTCH
T ss_pred hCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchh----hhcC-CceEECC------CCHHHHHHHHHHHHhCh
Confidence 7777 999884 556699999999999886666655 3567 8886653 37899999999999987
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.40 E-value=2.7e-12 Score=125.14 Aligned_cols=315 Identities=11% Similarity=0.072 Sum_probs=163.4
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEecCccccc----cCCCCceE-EEcCCCCCCCCCCCCCCHHH
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASK--RVKATLATTHYTVKS----IHATTVGV-EPISDGFDEGGFKQAPSVKA 77 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~--Gh~V~~~~~~~~~~~----~~~~g~~~-~~~~~~~~~~~~~~~~~~~~ 77 (459)
|++|||++++ |++....-+.+|.++|+++ |+++.++.+....+. ++..|+.. +.+ .- .....+...
T Consensus 25 m~~~kI~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~~tG~h~~m~~~~~~~~~i~~~~~l----~v--~~~~~~~~~ 97 (403)
T 3ot5_A 25 MAKIKVMSIF-GTRPEAIKMAPLVLALEKEPETFESTVVITAQHREMLDQVLEIFDIKPDIDL----DI--MKKGQTLAE 97 (403)
T ss_dssp -CCEEEEEEE-CSHHHHHHHHHHHHHHHTCTTTEEEEEEECC-----CHHHHHHTTCCCSEEC----CC--CC-CCCHHH
T ss_pred cccceEEEEE-ecChhHHHHHHHHHHHHhCCCCCcEEEEEecCcHHHHHHHHHhcCCCCCccc----cc--CCCCCCHHH
Confidence 6678888887 6676677778899999987 688877766654321 11123311 111 11 011223332
Q ss_pred HHHHHHHhchHHHHHHHHHhhcCCCCccEEEeCC--Cc-hhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCC
Q 012645 78 YLESFKTVGSRTLAEVILKYKDSESPVNCIVYDS--LL-TWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVN 154 (459)
Q Consensus 78 ~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~--~~-~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~ 154 (459)
. ... ....+.+++++. +||+|++-. .. +++..+|.++|||++.+...
T Consensus 98 ~---~~~-~~~~l~~~l~~~-----kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~ag--------------------- 147 (403)
T 3ot5_A 98 I---TSR-VMNGINEVIAAE-----NPDIVLVHGDTTTSFAAGLATFYQQKMLGHVEAG--------------------- 147 (403)
T ss_dssp H---HHH-HHHHHHHHHHHH-----CCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCC---------------------
T ss_pred H---HHH-HHHHHHHHHHHc-----CCCEEEEECCchhHHHHHHHHHHhCCCEEEEECC---------------------
Confidence 2 111 223455566665 899998632 22 34578899999998765321
Q ss_pred CCCCcccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcC--CCeeeeccc-
Q 012645 155 QETVPLTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGL--WPLVMIGPL- 231 (459)
Q Consensus 155 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~vgp~- 231 (459)
. +. ... ..... .+..+.... ..++.+++.+-...+.. .. .+. .++..+|..
T Consensus 148 -------------l--rs-~~~---~~~~p--~~~~r~~~~--~~a~~~~~~se~~~~~l-~~--~Gi~~~~i~vvGn~~ 201 (403)
T 3ot5_A 148 -------------L--RT-WNK---YSPFP--EEMNRQLTG--VMADIHFSPTKQAKENL-LA--EGKDPATIFVTGNTA 201 (403)
T ss_dssp -------------C--CC-SCT---TSSTT--HHHHHHHHH--HHCSEEEESSHHHHHHH-HH--TTCCGGGEEECCCHH
T ss_pred -------------c--cc-ccc---ccCCc--HHHHHHHHH--HhcCEEECCCHHHHHHH-HH--cCCCcccEEEeCCch
Confidence 0 00 000 00000 111111111 12455566654432221 11 111 247788742
Q ss_pred CCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHh-----CCCcEEEEEe
Q 012645 232 VPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKA-----SEKPFLWVVK 306 (459)
Q Consensus 232 ~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~-----~~~~~v~~~~ 306 (459)
.....+... . ....+.+.+ + ++++.++++.|...... ..+..+++++.. .+.++++..+
T Consensus 202 ~D~~~~~~~---------~--~~~~~~~~~-l---~~~~~vlv~~~r~~~~~-~~l~~ll~a~~~l~~~~~~~~~v~~~~ 265 (403)
T 3ot5_A 202 IDALKTTVQ---------K--DYHHPILEN-L---GDNRLILMTAHRRENLG-EPMQGMFEAVREIVESREDTELVYPMH 265 (403)
T ss_dssp HHHHHHHSC---------T--TCCCHHHHS-C---TTCEEEEECCCCHHHHT-THHHHHHHHHHHHHHHCTTEEEEEECC
T ss_pred HHHHHhhhh---------h--hcchHHHHh-c---cCCCEEEEEeCcccccC-cHHHHHHHHHHHHHHhCCCceEEEecC
Confidence 222111000 0 000121222 2 34557777665432211 124555555543 2445555433
Q ss_pred CCCCCCchhhhh--hcCCCceEEeeecH---HHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHH
Q 012645 307 ENENKLPVEFVN--SVGETGLVVRWCNQ---FEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEE 381 (459)
Q Consensus 307 ~~~~~~~~~~~~--~~~~~v~v~~~~p~---~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~ 381 (459)
.+ ....+.+.+ ...+++++.+++++ ..+++++++ +|+-.|..+ .||.++|+|+|++|-..+++. +.+
T Consensus 266 ~~-~~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~~~ad~--vv~~SGg~~-~EA~a~g~PvV~~~~~~~~~e----~v~ 337 (403)
T 3ot5_A 266 LN-PAVREKAMAILGGHERIHLIEPLDAIDFHNFLRKSYL--VFTDSGGVQ-EEAPGMGVPVLVLRDTTERPE----GIE 337 (403)
T ss_dssp SC-HHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHEEE--EEECCHHHH-HHGGGTTCCEEECCSSCSCHH----HHH
T ss_pred CC-HHHHHHHHHHhCCCCCEEEeCCCCHHHHHHHHHhcCE--EEECCccHH-HHHHHhCCCEEEecCCCcchh----hee
Confidence 21 111111211 12368999998863 378878887 998875333 799999999999976666654 357
Q ss_pred hhhceEEeeecCCCcccHHHHHHHHHHHhcCh
Q 012645 382 VWEVGVRAKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 382 ~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
. |.|..+. .+++.|.+++.++++|+
T Consensus 338 ~-g~~~lv~------~d~~~l~~ai~~ll~~~ 362 (403)
T 3ot5_A 338 A-GTLKLIG------TNKENLIKEALDLLDNK 362 (403)
T ss_dssp H-TSEEECC------SCHHHHHHHHHHHHHCH
T ss_pred C-CcEEEcC------CCHHHHHHHHHHHHcCH
Confidence 8 8776553 37899999999999987
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.37 E-value=6.4e-12 Score=122.33 Aligned_cols=323 Identities=10% Similarity=0.059 Sum_probs=166.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEecCccccc----cCCCCceE-EEcCCCCCCCCCCCCCCHHHH
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASK-RVKATLATTHYTVKS----IHATTVGV-EPISDGFDEGGFKQAPSVKAY 78 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~-Gh~V~~~~~~~~~~~----~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~ 78 (459)
|++|||++++ |++....-+.+|.++|+++ |+++.++.+....+. ++..+++. +.+. - .....+....
T Consensus 23 ~~m~ki~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~~~~i~~~~~l~----~--~~~~~~~~~~ 95 (396)
T 3dzc_A 23 NAMKKVLIVF-GTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLELFSITPDFDLN----I--MEPGQTLNGV 95 (396)
T ss_dssp -CCEEEEEEE-CSHHHHHHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHHHTTCCCSEECC----C--CCTTCCHHHH
T ss_pred CCCCeEEEEE-eccHhHHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhcCCCCceeee----c--CCCCCCHHHH
Confidence 4456887777 7777778888899999887 789876666554321 12223310 1111 1 0112233332
Q ss_pred HHHHHHhchHHHHHHHHHhhcCCCCccEEEe--CCCc-hhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCC
Q 012645 79 LESFKTVGSRTLAEVILKYKDSESPVNCIVY--DSLL-TWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQ 155 (459)
Q Consensus 79 ~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~--D~~~-~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~ 155 (459)
. .. ....+.+++++. +||+|++ |..+ +.+..+|.++|||++.+.. .
T Consensus 96 ~---~~-~~~~l~~~l~~~-----kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~a-g--------------------- 144 (396)
T 3dzc_A 96 T---SK-ILLGMQQVLSSE-----QPDVVLVHGDTATTFAASLAAYYQQIPVGHVEA-G--------------------- 144 (396)
T ss_dssp H---HH-HHHHHHHHHHHH-----CCSEEEEETTSHHHHHHHHHHHTTTCCEEEETC-C---------------------
T ss_pred H---HH-HHHHHHHHHHhc-----CCCEEEEECCchhHHHHHHHHHHhCCCEEEEEC-C---------------------
Confidence 1 11 223455566665 8999986 3233 3357788999999876532 1
Q ss_pred CCCcccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcC--CCeeeecc-cC
Q 012645 156 ETVPLTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGL--WPLVMIGP-LV 232 (459)
Q Consensus 156 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~vgp-~~ 232 (459)
. +. ..+ ...+. ....+.... ..++.+++.+-...+. ... .+. .++..+|. ..
T Consensus 145 ------------~--rs-~~~---~~~~~--~~~~r~~~~--~~a~~~~~~se~~~~~-l~~--~G~~~~ki~vvGn~~~ 199 (396)
T 3dzc_A 145 ------------L--RT-GNI---YSPWP--EEGNRKLTA--ALTQYHFAPTDTSRAN-LLQ--ENYNAENIFVTGNTVI 199 (396)
T ss_dssp ------------C--CC-SCT---TSSTT--HHHHHHHHH--HTCSEEEESSHHHHHH-HHH--TTCCGGGEEECCCHHH
T ss_pred ------------c--cc-ccc---ccCCc--HHHHHHHHH--HhcCEEECCCHHHHHH-HHH--cCCCcCcEEEECCcHH
Confidence 0 00 000 00000 111111111 2355666666543222 111 111 13777874 32
Q ss_pred CCccccccccCCccCCCCCCCCChhhhhhhhc-cCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhC-----CCcEEEEEe
Q 012645 233 PSAYLDQQIAGDSAYGANIWEPTGDQCMRWLA-TKPEKSVIYVSFGSMADIAANQVDEIARGLKAS-----EKPFLWVVK 306 (459)
Q Consensus 233 ~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~-~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~-----~~~~v~~~~ 306 (459)
....+....... .....+++.+.+. -.++++.|+++.+-..+... .+..+++++..+ +.++++..+
T Consensus 200 d~~~~~~~~~~~-------~~~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~~-~~~~ll~A~~~l~~~~~~~~~v~~~g 271 (396)
T 3dzc_A 200 DALLAVREKIHT-------DMDLQATLESQFPMLDASKKLILVTGHRRESFGG-GFERICQALITTAEQHPECQILYPVH 271 (396)
T ss_dssp HHHHHHHHHHHH-------CHHHHHHHHHTCTTCCTTSEEEEEECSCBCCCTT-HHHHHHHHHHHHHHHCTTEEEEEECC
T ss_pred HHHHHhhhhccc-------chhhHHHHHHHhCccCCCCCEEEEEECCcccchh-HHHHHHHHHHHHHHhCCCceEEEEeC
Confidence 221100000000 0000022233332 11345577766532222222 245667766542 445555443
Q ss_pred CCCCCCchhhhhh--cCCCceEEeeec---HHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHH
Q 012645 307 ENENKLPVEFVNS--VGETGLVVRWCN---QFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEE 381 (459)
Q Consensus 307 ~~~~~~~~~~~~~--~~~~v~v~~~~p---~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~ 381 (459)
.+ ....+.+.+. ..+++++.++++ ...+++.+++ +|+-.| |.+.||.++|+|+|+..-..+++ .+.+
T Consensus 272 ~~-~~~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~----e~v~ 343 (396)
T 3dzc_A 272 LN-PNVREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTERP----EAVA 343 (396)
T ss_dssp BC-HHHHHHHHHHTTTCTTEEEECCCCHHHHHHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSCH----HHHH
T ss_pred CC-hHHHHHHHHHHcCCCCEEEeCCCCHHHHHHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcch----HHHH
Confidence 21 1111122211 236888887775 3478888888 999987 66689999999999975555543 3567
Q ss_pred hhhceEEeeecCCCcccHHHHHHHHHHHhcCh
Q 012645 382 VWEVGVRAKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 382 ~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
. |.+..+. .+++.|.+++.++++|+
T Consensus 344 ~-G~~~lv~------~d~~~l~~ai~~ll~d~ 368 (396)
T 3dzc_A 344 A-GTVKLVG------TNQQQICDALSLLLTDP 368 (396)
T ss_dssp H-TSEEECT------TCHHHHHHHHHHHHHCH
T ss_pred c-CceEEcC------CCHHHHHHHHHHHHcCH
Confidence 7 8774432 36899999999999987
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=2e-11 Score=118.49 Aligned_cols=130 Identities=14% Similarity=0.151 Sum_probs=84.0
Q ss_pred CCcEEEEEeCCcccCCHHHHHHHHHHHHh-----CCCcEEEEEeCCCCCCchhhhhhc--CCCceEEeeecH---HHHhc
Q 012645 268 EKSVIYVSFGSMADIAANQVDEIARGLKA-----SEKPFLWVVKENENKLPVEFVNSV--GETGLVVRWCNQ---FEVLA 337 (459)
Q Consensus 268 ~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~-----~~~~~v~~~~~~~~~~~~~~~~~~--~~~v~v~~~~p~---~~lL~ 337 (459)
+++.|+++.|+..... ..+..+++++.. .+.++++..+.. ..+.+.+.+.. .++|.+.+++++ ..+++
T Consensus 204 ~~~~vl~~~gr~~~~~-kg~~~li~a~~~l~~~~~~~~l~i~~g~~-~~~~~~l~~~~~~~~~v~~~g~~~~~~~~~~~~ 281 (384)
T 1vgv_A 204 DKKMILVTGHRRESFG-RGFEEICHALADIATTHQDIQIVYPVHLN-PNVREPVNRILGHVKNVILIDPQEYLPFVWLMN 281 (384)
T ss_dssp TSEEEEEECCCBSSCC-HHHHHHHHHHHHHHHHCTTEEEEEECCBC-HHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHH
T ss_pred CCCEEEEEeCCccccc-hHHHHHHHHHHHHHhhCCCeEEEEEcCCC-HHHHHHHHHHhhcCCCEEEeCCCCHHHHHHHHH
Confidence 3557888888765322 234445555543 244555433321 10112222111 268888776664 46888
Q ss_pred ccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcCh
Q 012645 338 HQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 338 ~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
.+++ +|+.+| +++.||+++|+|+|+.+...+. ..+.+. |.|..++ . +++.|.++|.++++|+
T Consensus 282 ~ad~--~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~----~e~v~~-g~g~lv~-----~-d~~~la~~i~~ll~d~ 343 (384)
T 1vgv_A 282 HAWL--ILTDSG-GIQEEAPSLGKPVLVMRDTTER----PEAVTA-GTVRLVG-----T-DKQRIVEEVTRLLKDE 343 (384)
T ss_dssp HCSE--EEESSS-TGGGTGGGGTCCEEEESSCCSC----HHHHHH-TSEEEEC-----S-SHHHHHHHHHHHHHCH
T ss_pred hCcE--EEECCc-chHHHHHHcCCCEEEccCCCCc----chhhhC-CceEEeC-----C-CHHHHHHHHHHHHhCh
Confidence 8888 999885 4588999999999999874443 335678 8887665 4 7899999999999987
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=6.4e-11 Score=112.96 Aligned_cols=124 Identities=15% Similarity=0.110 Sum_probs=82.6
Q ss_pred EEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCC-CCCchhhhhhcCCCceEEeeecHH---HHhcccCccceec-
Q 012645 272 IYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENE-NKLPVEFVNSVGETGLVVRWCNQF---EVLAHQAVGCFIT- 346 (459)
Q Consensus 272 V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~v~v~~~~p~~---~lL~~~~~~~~I~- 346 (459)
+++..|+... ......++++++.++.+++++..... ..+. .+....+++|.+.+++|+. .+++.+++ +|.
T Consensus 164 ~i~~vG~~~~--~Kg~~~li~a~~~~~~~l~i~G~g~~~~~l~-~~~~~~~~~v~~~g~~~~~~l~~~~~~adv--~v~p 238 (342)
T 2iuy_A 164 FLLFMGRVSP--HKGALEAAAFAHACGRRLVLAGPAWEPEYFD-EITRRYGSTVEPIGEVGGERRLDLLASAHA--VLAM 238 (342)
T ss_dssp CEEEESCCCG--GGTHHHHHHHHHHHTCCEEEESCCCCHHHHH-HHHHHHTTTEEECCCCCHHHHHHHHHHCSE--EEEC
T ss_pred EEEEEecccc--ccCHHHHHHHHHhcCcEEEEEeCcccHHHHH-HHHHHhCCCEEEeccCCHHHHHHHHHhCCE--EEEC
Confidence 4556677652 23456677777777777766543221 1111 1222345899999999976 78888888 662
Q ss_pred -c-----------Cc-hhhHHHhhhcCCeeeccccccchhhHHHHHHH--hhhceEEeeecCCCcccHHHHHHHHHHHhc
Q 012645 347 -H-----------CG-WNSILEGLSLGVAVVAVPQFSDQPTNAKFVEE--VWEVGVRAKKNRAGIVTGEELNKCVNEVMD 411 (459)
Q Consensus 347 -H-----------GG-~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~--~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~ 411 (459)
. -| ..++.||+++|+|+|+... ......++. - +.|..++ . +.+++.++|.++++
T Consensus 239 s~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~~~~~~-~~g~~~~-----~-d~~~l~~~i~~l~~ 307 (342)
T 2iuy_A 239 SQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIVPSVGE-VVGYGTD-----F-APDEARRTLAGLPA 307 (342)
T ss_dssp CCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHGGGGEE-ECCSSSC-----C-CHHHHHHHHHTSCC
T ss_pred CcccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHhcccCC-CceEEcC-----C-CHHHHHHHHHHHHH
Confidence 2 33 3689999999999998775 345556666 4 4554443 6 89999999999987
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=1.8e-09 Score=105.23 Aligned_cols=307 Identities=13% Similarity=0.067 Sum_probs=163.5
Q ss_pred CCCcEEEEEcCC---C-ccCHHHHHHHHHHHHhCCCeEEEEecCccccccCC----CCceEEEcCCCCCCCCCCCCCCHH
Q 012645 5 RERVHVLVLTYP---A-QGHINPLLQFAKRLASKRVKATLATTHYTVKSIHA----TTVGVEPISDGFDEGGFKQAPSVK 76 (459)
Q Consensus 5 ~~~~kil~~~~~---~-~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~ 76 (459)
.++|||++++.. . .|.-.-+..++++|.++||+|++++.......... .+ .++.++.. ....
T Consensus 18 ~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~-~~~~~~~~---------~~~~ 87 (406)
T 2gek_A 18 GSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVVSGG-KAVPIPYN---------GSVA 87 (406)
T ss_dssp ---CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEEECC-CCC------------------
T ss_pred CCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCcccccCC-cEEecccc---------CCcc
Confidence 356899999842 2 56667899999999999999999998755431111 11 22222200 0000
Q ss_pred HHHHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCch--hHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCC
Q 012645 77 AYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLT--WALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVN 154 (459)
Q Consensus 77 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~--~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~ 154 (459)
. +. +.......+..++++. +||+|++..... .+..+++.+++|+|...+..
T Consensus 88 ~-~~-~~~~~~~~l~~~l~~~-----~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~-------------------- 140 (406)
T 2gek_A 88 R-LR-FGPATHRKVKKWIAEG-----DFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTS-------------------- 140 (406)
T ss_dssp -----CCHHHHHHHHHHHHHH-----CCSEEEEECCCSSSHHHHHHHHEESSEEEEECCC--------------------
T ss_pred c-cc-ccHHHHHHHHHHHHhc-----CCCEEEECCccchHHHHHHHHhcCCCEEEEEcCc--------------------
Confidence 0 00 0000112344455544 899999765442 35667778899999876532
Q ss_pred CCCCcccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHh-hcccCCceEEEcchhHhhHHHHHHHhcCCCeeeecccCC
Q 012645 155 QETVPLTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQF-GSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVP 233 (459)
Q Consensus 155 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vgp~~~ 233 (459)
.+. ......+.+.. ..+...+.+++.+-...+.. ...++. .++ .+.+.+.
T Consensus 141 -------~~~-------------------~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~-~~~~~~-~~~-vi~~~v~ 191 (406)
T 2gek_A 141 -------TTK-------------------SLTLSVFQGILRPYHEKIIGRIAVSDLARRWQ-MEALGS-DAV-EIPNGVD 191 (406)
T ss_dssp -------CCS-------------------HHHHHHHHSTTHHHHTTCSEEEESSHHHHHHH-HHHHSS-CEE-ECCCCBC
T ss_pred -------chh-------------------hhhHHHHHHHHHHHHhhCCEEEECCHHHHHHH-HHhcCC-CcE-EecCCCC
Confidence 000 00001111111 22356777777775543321 112221 123 3333222
Q ss_pred CccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCc-cc-CCHHHHHHHHHHHHh--CCCcEEEEEeCCC
Q 012645 234 SAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSM-AD-IAANQVDEIARGLKA--SEKPFLWVVKENE 309 (459)
Q Consensus 234 ~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~-~~-~~~~~~~~i~~a~~~--~~~~~v~~~~~~~ 309 (459)
...+... .... -+ ++...+++..|+. .. -..+.+-..+..+.+ .+.+++++ +.
T Consensus 192 ~~~~~~~-------------~~~~----~~---~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~-G~-- 248 (406)
T 2gek_A 192 VASFADA-------------PLLD----GY---PREGRTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILIV-GR-- 248 (406)
T ss_dssp HHHHHTC-------------CCCT----TC---SCSSCEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEEEE-SC--
T ss_pred hhhcCCC-------------chhh----hc---cCCCeEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEEEE-cC--
Confidence 1100000 0000 00 0112567777887 43 223333333333332 24454444 32
Q ss_pred CCCchhhhhh---cCCCceEEeeecHH---HHhcccCccceec----cCch-hhHHHhhhcCCeeeccccccchhhHHHH
Q 012645 310 NKLPVEFVNS---VGETGLVVRWCNQF---EVLAHQAVGCFIT----HCGW-NSILEGLSLGVAVVAVPQFSDQPTNAKF 378 (459)
Q Consensus 310 ~~~~~~~~~~---~~~~v~v~~~~p~~---~lL~~~~~~~~I~----HGG~-gs~~eal~~GvP~li~P~~~DQ~~na~r 378 (459)
+.. +.+.+. ..++|.+.+++|+. .+++.+++ +|. +.|+ .++.||+++|+|+|+.+. ......
T Consensus 249 ~~~-~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~ 321 (406)
T 2gek_A 249 GDE-DELREQAGDLAGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRV 321 (406)
T ss_dssp SCH-HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHH
T ss_pred CcH-HHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHH
Confidence 111 233221 25789999999875 78888888 663 3444 489999999999998765 456666
Q ss_pred HHHhhhceEEeeecCCCcccHHHHHHHHHHHhcCh
Q 012645 379 VEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 379 v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
+... +.|..++ .-+.+++.++|.++++|+
T Consensus 322 i~~~-~~g~~~~-----~~d~~~l~~~i~~l~~~~ 350 (406)
T 2gek_A 322 LADG-DAGRLVP-----VDDADGMAAALIGILEDD 350 (406)
T ss_dssp HTTT-TSSEECC-----TTCHHHHHHHHHHHHHCH
T ss_pred hcCC-CceEEeC-----CCCHHHHHHHHHHHHcCH
Confidence 6666 6777665 467899999999999987
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.25 E-value=3.6e-10 Score=109.09 Aligned_cols=129 Identities=14% Similarity=0.155 Sum_probs=81.0
Q ss_pred CCcEEEEEeCCcccCCHHHHHHHHHHHHhC-----CCcEEEEEeCCCC-CCchhhhhhcC--CCceEEeeecHH---HHh
Q 012645 268 EKSVIYVSFGSMADIAANQVDEIARGLKAS-----EKPFLWVVKENEN-KLPVEFVNSVG--ETGLVVRWCNQF---EVL 336 (459)
Q Consensus 268 ~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~-----~~~~v~~~~~~~~-~~~~~~~~~~~--~~v~v~~~~p~~---~lL 336 (459)
+++.++++.|...... ..+..+++++..+ +.+++ ++.... .+.+.+.+... ++|.+.+++++. .++
T Consensus 204 ~~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~~i--~~~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ 280 (375)
T 3beo_A 204 NNRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQVV--YPVHMNPVVRETANDILGDYGRIHLIEPLDVIDFHNVA 280 (375)
T ss_dssp TSEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEEEE--EECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHH
T ss_pred CCCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeEEE--EeCCCCHHHHHHHHHHhhccCCEEEeCCCCHHHHHHHH
Confidence 3456777788754321 2345566665442 33433 332211 01112222122 689987777654 678
Q ss_pred cccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcCh
Q 012645 337 AHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 337 ~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
+.+++ +|+..| +++.||+++|+|+|+....... ..+.+. |.|..++ . ++++|.++|.++++|+
T Consensus 281 ~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~----~e~v~~-g~g~~v~-----~-d~~~la~~i~~ll~~~ 343 (375)
T 3beo_A 281 ARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTER----PEGIEA-GTLKLAG-----T-DEETIFSLADELLSDK 343 (375)
T ss_dssp HTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSC----HHHHHT-TSEEECC-----S-CHHHHHHHHHHHHHCH
T ss_pred HhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCC----ceeecC-CceEEcC-----C-CHHHHHHHHHHHHhCh
Confidence 77777 998874 5588999999999988543332 335677 8776654 3 7899999999999987
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=2e-09 Score=103.72 Aligned_cols=143 Identities=17% Similarity=0.280 Sum_probs=92.9
Q ss_pred CcEEEEEeCCcccCCHHHHHHHHHHHHhCCC----c-EEEEEeCCCCCCchhhhh---h--cCCCceEEeeecHH-HHhc
Q 012645 269 KSVIYVSFGSMADIAANQVDEIARGLKASEK----P-FLWVVKENENKLPVEFVN---S--VGETGLVVRWCNQF-EVLA 337 (459)
Q Consensus 269 ~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~----~-~v~~~~~~~~~~~~~~~~---~--~~~~v~v~~~~p~~-~lL~ 337 (459)
+..+++..|+... ......+++++..+.. + -+++++... .+.+.+ . ..++|.+.++..+. .+++
T Consensus 195 ~~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~---~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~ 269 (374)
T 2iw1_A 195 QQNLLLQVGSDFG--RKGVDRSIEALASLPESLRHNTLLFVVGQDK---PRKFEALAEKLGVRSNVHFFSGRNDVSELMA 269 (374)
T ss_dssp TCEEEEEECSCTT--TTTHHHHHHHHHTSCHHHHHTEEEEEESSSC---CHHHHHHHHHHTCGGGEEEESCCSCHHHHHH
T ss_pred CCeEEEEeccchh--hcCHHHHHHHHHHhHhccCCceEEEEEcCCC---HHHHHHHHHHcCCCCcEEECCCcccHHHHHH
Confidence 3467778887653 2345556677766532 2 233333321 122221 1 24788888876544 7898
Q ss_pred ccCccceec----cCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcCh
Q 012645 338 HQAVGCFIT----HCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 338 ~~~~~~~I~----HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
.+++ +|. -|..+++.||+++|+|+|+... ..+...++.. +.|..+.. .-+.+++.++|.++++|+
T Consensus 270 ~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~~-~~g~~~~~----~~~~~~l~~~i~~l~~~~ 338 (374)
T 2iw1_A 270 AADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYIADA-NCGTVIAE----PFSQEQLNEVLRKALTQS 338 (374)
T ss_dssp HCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHHHHH-TCEEEECS----SCCHHHHHHHHHHHHHCH
T ss_pred hcCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhhccC-CceEEeCC----CCCHHHHHHHHHHHHcCh
Confidence 8888 775 5667899999999999999764 3556677888 88887762 357899999999999987
Q ss_pred h-hHHHHHHHHHHHH
Q 012645 414 R-SQKIKRNVSKWRE 427 (459)
Q Consensus 414 ~-~~~~~~~a~~l~~ 427 (459)
+ .+.+.+++++..+
T Consensus 339 ~~~~~~~~~~~~~~~ 353 (374)
T 2iw1_A 339 PLRMAWAENARHYAD 353 (374)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 2 1233444444333
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=1.5e-09 Score=109.20 Aligned_cols=142 Identities=10% Similarity=0.068 Sum_probs=87.3
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHHhCC-----CcEEEEEeCCCCC------C-------chhhhh-----hcCCCceEE
Q 012645 271 VIYVSFGSMADIAANQVDEIARGLKASE-----KPFLWVVKENENK------L-------PVEFVN-----SVGETGLVV 327 (459)
Q Consensus 271 ~V~vs~Gs~~~~~~~~~~~i~~a~~~~~-----~~~v~~~~~~~~~------~-------~~~~~~-----~~~~~v~v~ 327 (459)
.+++..|+... ...+..+++++..+. ...+++++...+. + .+.+.+ ...++|.+.
T Consensus 263 ~~i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~ 340 (499)
T 2r60_A 263 PAIIASSRLDQ--KKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMF 340 (499)
T ss_dssp CEEEECSCCCG--GGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEE
T ss_pred cEEEEeecCcc--ccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCCceEEEC
Confidence 56777888643 233555666666542 1234444431111 1 122221 135789999
Q ss_pred eeecHH---HHhccc----Cccceecc----CchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCc
Q 012645 328 RWCNQF---EVLAHQ----AVGCFITH----CGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGI 396 (459)
Q Consensus 328 ~~~p~~---~lL~~~----~~~~~I~H----GG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~ 396 (459)
+++|+. .+++.+ ++ +|.- |-..++.||+++|+|+|+... ......+..- ..|..++ .
T Consensus 341 G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v~~~-~~g~l~~-----~ 408 (499)
T 2r60_A 341 PLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEILDGG-KYGVLVD-----P 408 (499)
T ss_dssp ECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHTGGG-TSSEEEC-----T
T ss_pred CCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHhcCC-ceEEEeC-----C
Confidence 999765 577777 77 7632 334689999999999998753 3444445554 5787776 4
Q ss_pred ccHHHHHHHHHHHhcChh-hHHHHHHHHHHH
Q 012645 397 VTGEELNKCVNEVMDGER-SQKIKRNVSKWR 426 (459)
Q Consensus 397 ~~~~~l~~~i~~ll~~~~-~~~~~~~a~~l~ 426 (459)
-+.+.+.++|.++++|++ .+.+.+++++..
T Consensus 409 ~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~ 439 (499)
T 2r60_A 409 EDPEDIARGLLKAFESEETWSAYQEKGKQRV 439 (499)
T ss_dssp TCHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 678999999999999873 223444444433
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=1.9e-07 Score=90.65 Aligned_cols=315 Identities=12% Similarity=0.139 Sum_probs=162.5
Q ss_pred cEEEEEcCCC-ccCHHHHHHHHHHHHhCCCeEEEEecCccccc-cCCCCceEEEcCCCCCCCCCCCCCCHHHHHHHHHHh
Q 012645 8 VHVLVLTYPA-QGHINPLLQFAKRLASKRVKATLATTHYTVKS-IHATTVGVEPISDGFDEGGFKQAPSVKAYLESFKTV 85 (459)
Q Consensus 8 ~kil~~~~~~-~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (459)
.++....+|. .|.-.-...|+++|+++||+|++++....... ....++.+..++..-... ... .. ..+.
T Consensus 16 ~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~-~~--~~~~----- 86 (394)
T 2jjm_A 16 LKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFRLNKVYPNIYFHEVTVNQYSV-FQY-PP--YDLA----- 86 (394)
T ss_dssp CEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC----CCCTTEEEECCCCC-----CCS-CC--HHHH-----
T ss_pred eeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCcccccCCceEEEecccccccc-ccc-cc--ccHH-----
Confidence 5677777775 45556678999999999999999998543221 223577776654210000 000 00 1111
Q ss_pred chHHHHHHHHHhhcCCCCccEEEeCCCch--hHHHHHHH-c--CCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCcc
Q 012645 86 GSRTLAEVILKYKDSESPVNCIVYDSLLT--WALDVARQ-F--GIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPL 160 (459)
Q Consensus 86 ~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~--~~~~~a~~-l--giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 160 (459)
....+..++++. +||+|++..... ....++.. + ++|+|...+.....
T Consensus 87 ~~~~l~~~l~~~-----~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~----------------------- 138 (394)
T 2jjm_A 87 LASKMAEVAQRE-----NLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDIT----------------------- 138 (394)
T ss_dssp HHHHHHHHHHHH-----TCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHH-----------------------
T ss_pred HHHHHHHHHHHc-----CCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCccc-----------------------
Confidence 112334455554 899999874432 23334443 3 59998876543100
Q ss_pred cCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcCCCeeeecccCCCcccccc
Q 012645 161 TLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAYLDQQ 240 (459)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vgp~~~~~~~~~~ 240 (459)
. ... ........+. .+..++.+++.+-...+. .........++..+...+....+
T Consensus 139 -~-----~~~---------~~~~~~~~~~------~~~~ad~ii~~s~~~~~~-~~~~~~~~~~~~vi~ngv~~~~~--- 193 (394)
T 2jjm_A 139 -V-----LGS---------DPSLNNLIRF------GIEQSDVVTAVSHSLINE-THELVKPNKDIQTVYNFIDERVY--- 193 (394)
T ss_dssp -T-----TTT---------CTTTHHHHHH------HHHHSSEEEESCHHHHHH-HHHHTCCSSCEEECCCCCCTTTC---
T ss_pred -c-----cCC---------CHHHHHHHHH------HHhhCCEEEECCHHHHHH-HHHhhCCcccEEEecCCccHHhc---
Confidence 0 000 0001111111 124567777776554332 11121111234444433322100
Q ss_pred ccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHh----CCCcEEEEEeCCCCCCchhh
Q 012645 241 IAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKA----SEKPFLWVVKENENKLPVEF 316 (459)
Q Consensus 241 ~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~----~~~~~v~~~~~~~~~~~~~~ 316 (459)
.....+.+..-+... ++..+++..|+.... ..+..+++++.. .+.+++++ +.. ...+.+
T Consensus 194 -----------~~~~~~~~~~~~~~~-~~~~~i~~~G~~~~~--Kg~~~li~a~~~l~~~~~~~l~i~-G~g--~~~~~l 256 (394)
T 2jjm_A 194 -----------FKRDMTQLKKEYGIS-ESEKILIHISNFRKV--KRVQDVVQAFAKIVTEVDAKLLLV-GDG--PEFCTI 256 (394)
T ss_dssp -----------CCCCCHHHHHHTTCC----CEEEEECCCCGG--GTHHHHHHHHHHHHHSSCCEEEEE-CCC--TTHHHH
T ss_pred -----------CCcchHHHHHHcCCC-CCCeEEEEeeccccc--cCHHHHHHHHHHHHhhCCCEEEEE-CCc--hHHHHH
Confidence 001122233333221 223566677886531 223333444333 34554444 322 111222
Q ss_pred hh---h--cCCCceEEeeecHH-HHhcccCcccee----ccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhce
Q 012645 317 VN---S--VGETGLVVRWCNQF-EVLAHQAVGCFI----THCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVG 386 (459)
Q Consensus 317 ~~---~--~~~~v~v~~~~p~~-~lL~~~~~~~~I----~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G 386 (459)
.+ . ..++|.+.++..+. .+++.+++ +| .-|..+++.||+++|+|+|+.+.. .....++.. +.|
T Consensus 257 ~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~----~~~e~v~~~-~~g 329 (394)
T 2jjm_A 257 LQLVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVG----GIPEVIQHG-DTG 329 (394)
T ss_dssp HHHHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCT----TSTTTCCBT-TTE
T ss_pred HHHHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCC----ChHHHhhcC-Cce
Confidence 21 1 24678888876543 78988888 77 556678999999999999988753 222233344 567
Q ss_pred EEeeecCCCcccHHHHHHHHHHHhcCh
Q 012645 387 VRAKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 387 ~~~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
..++ .-+.+++.++|.++++|+
T Consensus 330 ~~~~-----~~d~~~la~~i~~l~~~~ 351 (394)
T 2jjm_A 330 YLCE-----VGDTTGVADQAIQLLKDE 351 (394)
T ss_dssp EEEC-----TTCHHHHHHHHHHHHHCH
T ss_pred EEeC-----CCCHHHHHHHHHHHHcCH
Confidence 6665 457899999999999987
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=1.1e-07 Score=92.88 Aligned_cols=129 Identities=14% Similarity=0.035 Sum_probs=78.9
Q ss_pred cEEEEEeCCcccC-CHHHHHHHHHHHHh--CCCcEEEEEeCCCCCCc---h---hhhhh--cCCCceEEeeec---H---
Q 012645 270 SVIYVSFGSMADI-AANQVDEIARGLKA--SEKPFLWVVKENENKLP---V---EFVNS--VGETGLVVRWCN---Q--- 332 (459)
Q Consensus 270 ~~V~vs~Gs~~~~-~~~~~~~i~~a~~~--~~~~~v~~~~~~~~~~~---~---~~~~~--~~~~v~v~~~~p---~--- 332 (459)
..+++..|..... ..+.+-..+..+.. .+.+++++..+. ...+ + .+.+. ..++|.+.+|++ +
T Consensus 231 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~-~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~ 309 (416)
T 2x6q_A 231 KPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVMA-HDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREV 309 (416)
T ss_dssp SCEEEEECCCCTTSCHHHHHHHHHHHHHHCTTCEEEEEECCC-TTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHH
T ss_pred CcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEEecCc-ccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHHHH
Confidence 3566677876532 23333333333322 356666654432 1001 1 11111 347899999876 2
Q ss_pred HHHhcccCccceeccC----chhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHH
Q 012645 333 FEVLAHQAVGCFITHC----GWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNE 408 (459)
Q Consensus 333 ~~lL~~~~~~~~I~HG----G~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ 408 (459)
..+++.+++ +|.-. ...++.||+++|+|+|+.+. ..+...++.. +.|..++ +.+++.++|.+
T Consensus 310 ~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~-~~g~l~~-------d~~~la~~i~~ 375 (416)
T 2x6q_A 310 NAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDG-ETGFLVR-------DANEAVEVVLY 375 (416)
T ss_dssp HHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBT-TTEEEES-------SHHHHHHHHHH
T ss_pred HHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecC-CCeEEEC-------CHHHHHHHHHH
Confidence 267877887 77543 45689999999999998764 3455555555 5675553 67899999999
Q ss_pred HhcCh
Q 012645 409 VMDGE 413 (459)
Q Consensus 409 ll~~~ 413 (459)
+++|+
T Consensus 376 ll~~~ 380 (416)
T 2x6q_A 376 LLKHP 380 (416)
T ss_dssp HHHCH
T ss_pred HHhCH
Confidence 99987
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=98.93 E-value=3.7e-09 Score=102.07 Aligned_cols=311 Identities=11% Similarity=0.086 Sum_probs=165.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCcccc-ccCC---CCceEEEcCCC-CCCCCCCCCCCHHHHHHHH
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVK-SIHA---TTVGVEPISDG-FDEGGFKQAPSVKAYLESF 82 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~-~~~~---~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 82 (459)
.|++++ .|++-.+.-+.++.++|.++ ++..++.+....+ .+.+ .++.. +-|+. +.. ..++......
T Consensus 10 ~~~~~v-~GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~~~~~~i-~~~~~~l~~----~~~~~~~~~~-- 80 (385)
T 4hwg_A 10 LKVMTI-VGTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVFFDDMGI-RKPDYFLEV----AADNTAKSIG-- 80 (385)
T ss_dssp CEEEEE-ECSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHHHC-CCC-CCCSEECCC----CCCCSHHHHH--
T ss_pred hheeEE-EEcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHHHhhCCC-CCCceecCC----CCCCHHHHHH--
Confidence 355555 48888888899999999877 9988888776643 2222 22222 11111 111 1122222221
Q ss_pred HHhchHHHHHHHHHhhcCCCCccEEEe--CCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCcc
Q 012645 83 KTVGSRTLAEVILKYKDSESPVNCIVY--DSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPL 160 (459)
Q Consensus 83 ~~~~~~~~~~l~~~~~~~~~~~Dlvi~--D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 160 (459)
.....+.+++++. +||+|+. |..+.++..+|.++|||++.+...
T Consensus 81 --~~~~~l~~~l~~~-----kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~eag--------------------------- 126 (385)
T 4hwg_A 81 --LVIEKVDEVLEKE-----KPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAG--------------------------- 126 (385)
T ss_dssp --HHHHHHHHHHHHH-----CCSEEEEESCSGGGGGHHHHHHTTCCEEEESCC---------------------------
T ss_pred --HHHHHHHHHHHhc-----CCcEEEEECCchHHHHHHHHHHhCCCEEEEeCC---------------------------
Confidence 1233455666665 8999985 334444588899999997765321
Q ss_pred cCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcC--CCeeeecc-cCCCccc
Q 012645 161 TLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGL--WPLVMIGP-LVPSAYL 237 (459)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~vgp-~~~~~~~ 237 (459)
+.. +. ........+. ... .-++..++.+-...+. .. . .+. .+++.+|. ......+
T Consensus 127 -------lrs------~~-~~~pee~nR~---~~~--~~a~~~~~~te~~~~~-l~-~-~G~~~~~I~vtGnp~~D~~~~ 184 (385)
T 4hwg_A 127 -------NRC------FD-QRVPEEINRK---IID--HISDVNITLTEHARRY-LI-A-EGLPAELTFKSGSHMPEVLDR 184 (385)
T ss_dssp -------CCC------SC-TTSTHHHHHH---HHH--HHCSEEEESSHHHHHH-HH-H-TTCCGGGEEECCCSHHHHHHH
T ss_pred -------Ccc------cc-ccCcHHHHHH---HHH--hhhceeecCCHHHHHH-HH-H-cCCCcCcEEEECCchHHHHHH
Confidence 100 00 0000111111 111 1245555555443222 11 0 111 24778884 2221111
Q ss_pred cccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCC-HHHHHHHHHHHHhC----CCcEEEEEeCCCCCC
Q 012645 238 DQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIA-ANQVDEIARGLKAS----EKPFLWVVKENENKL 312 (459)
Q Consensus 238 ~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~-~~~~~~i~~a~~~~----~~~~v~~~~~~~~~~ 312 (459)
.... ...+++.+.+.-. +++.|+++.|...+.. ...+..+++++..+ +..+|+..... .
T Consensus 185 ~~~~------------~~~~~~~~~lgl~-~~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~---~ 248 (385)
T 4hwg_A 185 FMPK------------ILKSDILDKLSLT-PKQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPR---T 248 (385)
T ss_dssp HHHH------------HHHCCHHHHTTCC-TTSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHH---H
T ss_pred hhhh------------cchhHHHHHcCCC-cCCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChH---H
Confidence 0000 0011133333322 3558888888754332 24566677776553 45666654311 1
Q ss_pred chhhhhh-----cCCCceEEeeec---HHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhh
Q 012645 313 PVEFVNS-----VGETGLVVRWCN---QFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWE 384 (459)
Q Consensus 313 ~~~~~~~-----~~~~v~v~~~~p---~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G 384 (459)
.+.+.+. ..+|+++.+.++ ...+++++++ +|+-.|. .+.||.+.|+|+|+++...+.+. ..+. |
T Consensus 249 ~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e----~v~~-G 320 (385)
T 4hwg_A 249 KKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE----GMDA-G 320 (385)
T ss_dssp HHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH----HHHH-T
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh----hhhc-C
Confidence 1111111 135787766554 4578988888 9998775 46999999999999987554332 3567 7
Q ss_pred ceEEeeecCCCcccHHHHHHHHHHHhcCh
Q 012645 385 VGVRAKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 385 ~G~~~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
.+..+. .+++.|.+++.++++|+
T Consensus 321 ~~~lv~------~d~~~i~~ai~~ll~d~ 343 (385)
T 4hwg_A 321 TLIMSG------FKAERVLQAVKTITEEH 343 (385)
T ss_dssp CCEECC------SSHHHHHHHHHHHHTTC
T ss_pred ceEEcC------CCHHHHHHHHHHHHhCh
Confidence 665442 47899999999999986
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=98.78 E-value=2.2e-06 Score=85.47 Aligned_cols=129 Identities=11% Similarity=0.028 Sum_probs=75.8
Q ss_pred EEEEEeCCcccC-CHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhh---hhcCCCce-EEeeecHH--HHhcccCccc
Q 012645 271 VIYVSFGSMADI-AANQVDEIARGLKASEKPFLWVVKENENKLPVEFV---NSVGETGL-VVRWCNQF--EVLAHQAVGC 343 (459)
Q Consensus 271 ~V~vs~Gs~~~~-~~~~~~~i~~a~~~~~~~~v~~~~~~~~~~~~~~~---~~~~~~v~-v~~~~p~~--~lL~~~~~~~ 343 (459)
.+++..|+.... ..+.+-..+..+...+.+++++..+. ....+.+. ...+++|. +.++.... .+++.+++
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~-~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~adv-- 368 (485)
T 1rzu_A 292 PLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGD-VALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDA-- 368 (485)
T ss_dssp CEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBC-HHHHHHHHHHHHHTTTTEEEEESCCHHHHHHHHHHCSE--
T ss_pred eEEEEEccCccccCHHHHHHHHHHHHhcCceEEEEeCCc-hHHHHHHHHHHHhCCCcEEEecCCCHHHHHHHHhcCCE--
Confidence 477788887642 23333333333333466666654431 01112221 22357887 56773332 57878887
Q ss_pred eec----cCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhh----------ceEEeeecCCCcccHHHHHHHHHHH
Q 012645 344 FIT----HCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWE----------VGVRAKKNRAGIVTGEELNKCVNEV 409 (459)
Q Consensus 344 ~I~----HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G----------~G~~~~~~~~~~~~~~~l~~~i~~l 409 (459)
+|. -|-..++.||+++|+|+|+.... .... +... | .|..++ .-++++|.++|.++
T Consensus 369 ~v~pS~~E~~~~~~lEAma~G~PvI~s~~g----g~~e-~v~~-~~~~~~~~~~~~G~l~~-----~~d~~~la~~i~~l 437 (485)
T 1rzu_A 369 IIIPSRFEPCGLTQLYALRYGCIPVVARTG----GLAD-TVID-ANHAALASKAATGVQFS-----PVTLDGLKQAIRRT 437 (485)
T ss_dssp EEECCSCCSSCSHHHHHHHHTCEEEEESSH----HHHH-HCCB-CCHHHHHTTCCCBEEES-----SCSHHHHHHHHHHH
T ss_pred EEECcccCCCCHHHHHHHHCCCCEEEeCCC----Chhh-eecc-cccccccccCCcceEeC-----CCCHHHHHHHHHHH
Confidence 763 24456899999999999987642 2222 2222 2 465554 46789999999999
Q ss_pred h---cCh
Q 012645 410 M---DGE 413 (459)
Q Consensus 410 l---~~~ 413 (459)
+ +|+
T Consensus 438 l~~~~~~ 444 (485)
T 1rzu_A 438 VRYYHDP 444 (485)
T ss_dssp HHHHTCH
T ss_pred HHHhCCH
Confidence 9 676
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=98.74 E-value=9.6e-06 Score=80.82 Aligned_cols=131 Identities=12% Similarity=0.071 Sum_probs=75.7
Q ss_pred CcEEEEEeCCccc-CCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhh---hhcCCCce-EEeeecHH--HHhcccCc
Q 012645 269 KSVIYVSFGSMAD-IAANQVDEIARGLKASEKPFLWVVKENENKLPVEFV---NSVGETGL-VVRWCNQF--EVLAHQAV 341 (459)
Q Consensus 269 ~~~V~vs~Gs~~~-~~~~~~~~i~~a~~~~~~~~v~~~~~~~~~~~~~~~---~~~~~~v~-v~~~~p~~--~lL~~~~~ 341 (459)
+..+++..|.... -..+.+-..+..+...+.+++++..+. ....+.+. ...+++|. +.++.... .+++.+++
T Consensus 291 ~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~-~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~adv 369 (485)
T 2qzs_A 291 KVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGD-PVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADV 369 (485)
T ss_dssp TSCEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEEEEEC-HHHHHHHHHHHHHSTTTEEEEESCCHHHHHHHHHHCSE
T ss_pred CCeEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEEeCCc-hHHHHHHHHHHHhCCCcEEEeCCCCHHHHHHHHHhCCE
Confidence 3366677777643 223333333333333466666665432 01112221 22346786 66774332 67878888
Q ss_pred cceec----cCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhh----------ceEEeeecCCCcccHHHHHHHHH
Q 012645 342 GCFIT----HCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWE----------VGVRAKKNRAGIVTGEELNKCVN 407 (459)
Q Consensus 342 ~~~I~----HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G----------~G~~~~~~~~~~~~~~~l~~~i~ 407 (459)
+|. -|...++.||+++|+|+|+.... .... +... | .|..++ .-+++++.++|.
T Consensus 370 --~v~pS~~E~~g~~~lEAma~G~PvI~s~~g----g~~e-~v~~-~~~~~~~~~~~~G~l~~-----~~d~~~la~~i~ 436 (485)
T 2qzs_A 370 --ILVPSRFEPCGLTQLYGLKYGTLPLVRRTG----GLAD-TVSD-CSLENLADGVASGFVFE-----DSNAWSLLRAIR 436 (485)
T ss_dssp --EEECCSCCSSCSHHHHHHHHTCEEEEESSH----HHHH-HCCB-CCHHHHHTTCCCBEEEC-----SSSHHHHHHHHH
T ss_pred --EEECCccCCCcHHHHHHHHCCCCEEECCCC----Cccc-eecc-CccccccccccceEEEC-----CCCHHHHHHHHH
Confidence 663 23446889999999999987542 2222 2222 2 465555 457899999999
Q ss_pred HHh---cCh
Q 012645 408 EVM---DGE 413 (459)
Q Consensus 408 ~ll---~~~ 413 (459)
+++ +|+
T Consensus 437 ~ll~~~~~~ 445 (485)
T 2qzs_A 437 RAFVLWSRP 445 (485)
T ss_dssp HHHHHHTSH
T ss_pred HHHHHcCCH
Confidence 999 676
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=98.70 E-value=6.9e-07 Score=93.59 Aligned_cols=131 Identities=9% Similarity=0.121 Sum_probs=78.7
Q ss_pred CcEEEEEeCCcccCCHHHHHHHHHHHHhC-----CCcEEEEEeCCC--CCC------chhhh---h--hcCCCceEEe--
Q 012645 269 KSVIYVSFGSMADIAANQVDEIARGLKAS-----EKPFLWVVKENE--NKL------PVEFV---N--SVGETGLVVR-- 328 (459)
Q Consensus 269 ~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~-----~~~~v~~~~~~~--~~~------~~~~~---~--~~~~~v~v~~-- 328 (459)
+.++++..|.... ...+..+++|+..+ +.+++++..... ... .+.+. + ...++|.+.+
T Consensus 571 ~~~vIl~vGRl~~--~KGid~LIeA~~~L~~~~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~ 648 (816)
T 3s28_A 571 KKPILFTMARLDR--VKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQ 648 (816)
T ss_dssp TSCEEEEECCCCT--TTTHHHHHHHHHHCHHHHHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCC
T ss_pred CCeEEEEEccCcc--cCCHHHHHHHHHHHHhhCCCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCc
Confidence 3467778888753 23345555665553 345555544321 000 01111 1 1347888887
Q ss_pred --eecHHHHhc----ccCccceecc----CchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCccc
Q 012645 329 --WCNQFEVLA----HQAVGCFITH----CGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVT 398 (459)
Q Consensus 329 --~~p~~~lL~----~~~~~~~I~H----GG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~ 398 (459)
++|+.++.. .+++ +|.- |-..++.||+++|+|+|+. |-......++.- +.|..++ .-+
T Consensus 649 ~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV~dg-~~Gllv~-----p~D 716 (816)
T 3s28_A 649 MDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVHG-KSGFHID-----PYH 716 (816)
T ss_dssp CCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHCCBT-TTBEEEC-----TTS
T ss_pred cccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHHccC-CcEEEeC-----CCC
Confidence 445555543 3456 7732 3446899999999999986 444455555555 6787776 457
Q ss_pred HHHHHHHHHHHh----cCh
Q 012645 399 GEELNKCVNEVM----DGE 413 (459)
Q Consensus 399 ~~~l~~~i~~ll----~~~ 413 (459)
++.+.++|.+++ .|+
T Consensus 717 ~e~LA~aI~~lL~~Ll~d~ 735 (816)
T 3s28_A 717 GDQAADTLADFFTKCKEDP 735 (816)
T ss_dssp HHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHhccCH
Confidence 889999997776 776
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=98.67 E-value=1e-05 Score=78.74 Aligned_cols=130 Identities=11% Similarity=0.111 Sum_probs=77.0
Q ss_pred CcEEEEEeCCcccCCHHHHHHHHHHHHh-----CCCcEEEEEeCCCC---CCchhhhh-----hcCCC-------ceEEe
Q 012645 269 KSVIYVSFGSMADIAANQVDEIARGLKA-----SEKPFLWVVKENEN---KLPVEFVN-----SVGET-------GLVVR 328 (459)
Q Consensus 269 ~~~V~vs~Gs~~~~~~~~~~~i~~a~~~-----~~~~~v~~~~~~~~---~~~~~~~~-----~~~~~-------v~v~~ 328 (459)
+..+++..|+.... ..+..+++++.. .+.+++++..+... .+.+.+.+ ...++ +.+.+
T Consensus 183 ~~~~il~vGr~~~~--Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g 260 (413)
T 3oy2_A 183 DDVLFLNMNRNTAR--KRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRT 260 (413)
T ss_dssp TSEEEECCSCSSGG--GTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECS
T ss_pred CceEEEEcCCCchh--cCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccceeeccC
Confidence 34788888886431 223334444333 45677766654321 11122221 13343 55568
Q ss_pred eecHH---HHhcccCccceec----cCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhc---------------e
Q 012645 329 WCNQF---EVLAHQAVGCFIT----HCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEV---------------G 386 (459)
Q Consensus 329 ~~p~~---~lL~~~~~~~~I~----HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~---------------G 386 (459)
|+|+. .+++.+++ +|. -|...++.||+++|+|+|+.... .....+..- .. |
T Consensus 261 ~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~~----g~~e~v~~~-~~~~i~~~~~~~~~~~~G 333 (413)
T 3oy2_A 261 VLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAVG----GADDYFSGD-CVYKIKPSAWISVDDRDG 333 (413)
T ss_dssp CCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECCH----HHHHHSCTT-TSEEECCCEEEECTTTCS
T ss_pred cCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCCC----ChHHHHccC-cccccccccccccccccC
Confidence 99854 57877887 663 23445899999999999986532 333333322 21 4
Q ss_pred E--EeeecCCCcccHHHHHHHHHHHhcCh
Q 012645 387 V--RAKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 387 ~--~~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
. .+. .-+++++.++| ++++|+
T Consensus 334 ~~gl~~-----~~d~~~la~~i-~l~~~~ 356 (413)
T 3oy2_A 334 IGGIEG-----IIDVDDLVEAF-TFFKDE 356 (413)
T ss_dssp SCCEEE-----ECCHHHHHHHH-HHTTSH
T ss_pred cceeeC-----CCCHHHHHHHH-HHhcCH
Confidence 4 444 35899999999 999987
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=98.49 E-value=2.8e-05 Score=75.64 Aligned_cols=114 Identities=11% Similarity=-0.007 Sum_probs=74.7
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHHh--CCCcEEEEEeCCCCCCchhhhhhcCCCceEEeeecHH---HHhcccCcccee
Q 012645 271 VIYVSFGSMADIAANQVDEIARGLKA--SEKPFLWVVKENENKLPVEFVNSVGETGLVVRWCNQF---EVLAHQAVGCFI 345 (459)
Q Consensus 271 ~V~vs~Gs~~~~~~~~~~~i~~a~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~v~v~~~~p~~---~lL~~~~~~~~I 345 (459)
.+++..|+.... ... +.++.+ .+.+++++ +.+ .. ... ...+||.+.+++|+. .+++.+++ +|
T Consensus 223 ~~i~~vGrl~~~-Kg~----~~~l~~~~~~~~l~iv-G~g--~~-~~~--~l~~~V~f~G~~~~~~l~~~~~~adv--~v 289 (406)
T 2hy7_A 223 IHAVAVGSMLFD-PEF----FVVASKAFPQVTFHVI-GSG--MG-RHP--GYGDNVIVYGEMKHAQTIGYIKHARF--GI 289 (406)
T ss_dssp EEEEEECCTTBC-HHH----HHHHHHHCTTEEEEEE-SCS--SC-CCT--TCCTTEEEECCCCHHHHHHHHHTCSE--EE
T ss_pred cEEEEEeccccc-cCH----HHHHHHhCCCeEEEEE-eCc--hH-Hhc--CCCCCEEEcCCCCHHHHHHHHHhcCE--EE
Confidence 677788887643 222 333332 34444444 332 11 111 245789999999865 57877887 66
Q ss_pred c---cCch-hhHHHhh-------hcCCeeeccccccchhhHHHHHHHhhhceEE-eeecCCCcccHHHHHHHHHHHhcCh
Q 012645 346 T---HCGW-NSILEGL-------SLGVAVVAVPQFSDQPTNAKFVEEVWEVGVR-AKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 346 ~---HGG~-gs~~eal-------~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~-~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
. +.|. +++.||+ ++|+|+|+... +..- ..|.. ++ .-+++.|.++|.++++|+
T Consensus 290 ~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~-~~G~l~v~-----~~d~~~la~ai~~ll~~~ 353 (406)
T 2hy7_A 290 APYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGP-YKSRFGYT-----PGNADSVIAAITQALEAP 353 (406)
T ss_dssp CCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCS-CSSEEEEC-----TTCHHHHHHHHHHHHHCC
T ss_pred ECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccC-cceEEEeC-----CCCHHHHHHHHHHHHhCc
Confidence 3 3344 5788999 99999998765 4444 55765 55 467899999999999987
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=98.44 E-value=6.9e-05 Score=76.17 Aligned_cols=83 Identities=7% Similarity=0.037 Sum_probs=61.9
Q ss_pred CCceEEeeecHH---HHhcccCcccee---ccCchhhHHHhhhcCCeeeccccccc-hhhHHHHHHHhhhceEEeeecCC
Q 012645 322 ETGLVVRWCNQF---EVLAHQAVGCFI---THCGWNSILEGLSLGVAVVAVPQFSD-QPTNAKFVEEVWEVGVRAKKNRA 394 (459)
Q Consensus 322 ~~v~v~~~~p~~---~lL~~~~~~~~I---~HGG~gs~~eal~~GvP~li~P~~~D-Q~~na~rv~~~~G~G~~~~~~~~ 394 (459)
++|++.+++|+. .+++.+++ || ..|+..++.||+++|+|+|++|-..= -..-+..+... |+...+.
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~-g~~e~v~---- 506 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHL-GLDEMNV---- 506 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHH-TCGGGBC----
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHC-CChhhhc----
Confidence 789999999854 56877887 76 23667899999999999999774311 11224566777 7776553
Q ss_pred CcccHHHHHHHHHHHhcCh
Q 012645 395 GIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 395 ~~~~~~~l~~~i~~ll~~~ 413 (459)
-+++.+.+++.++++|+
T Consensus 507 --~~~~~la~~i~~l~~~~ 523 (568)
T 2vsy_A 507 --ADDAAFVAKAVALASDP 523 (568)
T ss_dssp --SSHHHHHHHHHHHHHCH
T ss_pred --CCHHHHHHHHHHHhcCH
Confidence 27899999999999997
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=98.42 E-value=1.1e-06 Score=74.93 Aligned_cols=139 Identities=10% Similarity=0.105 Sum_probs=91.4
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHHhC-CCcEEEEEeCCC-CCCchhh---hhhcCCCceEEeeecH---HHHhcccCcc
Q 012645 271 VIYVSFGSMADIAANQVDEIARGLKAS-EKPFLWVVKENE-NKLPVEF---VNSVGETGLVVRWCNQ---FEVLAHQAVG 342 (459)
Q Consensus 271 ~V~vs~Gs~~~~~~~~~~~i~~a~~~~-~~~~v~~~~~~~-~~~~~~~---~~~~~~~v~v~~~~p~---~~lL~~~~~~ 342 (459)
.+++..|+... ...+..+++++... +.+++++..... ..+..-. .....+||.+.+|+|+ ..+++.+++
T Consensus 24 ~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~l~i~G~~~~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adi- 100 (177)
T 2f9f_A 24 DFWLSVNRIYP--EKRIELQLEVFKKLQDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCKG- 100 (177)
T ss_dssp SCEEEECCSSG--GGTHHHHHHHHHHCTTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHCSE-
T ss_pred CEEEEEecccc--ccCHHHHHHHHHhCCCcEEEEEecCccHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHhCCE-
Confidence 45667787653 23466677777776 556666543322 2221111 1124579999999997 478888888
Q ss_pred ceec---cCch-hhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcChhhHHH
Q 012645 343 CFIT---HCGW-NSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKI 418 (459)
Q Consensus 343 ~~I~---HGG~-gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~ 418 (459)
+|. +.|+ .++.||+++|+|+|+... ..+...++.. +.|..+ . .+.+++.++|.++++|++ .+
T Consensus 101 -~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~-~~g~~~-~-----~d~~~l~~~i~~l~~~~~--~~ 166 (177)
T 2f9f_A 101 -LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETVINE-KTGYLV-N-----ADVNEIIDAMKKVSKNPD--KF 166 (177)
T ss_dssp -EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHCCBT-TTEEEE-C-----SCHHHHHHHHHHHHHCTT--TT
T ss_pred -EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHhcCC-CccEEe-C-----CCHHHHHHHHHHHHhCHH--HH
Confidence 775 3344 599999999999998753 4555556666 678777 3 478999999999998872 22
Q ss_pred HHHHHHHH
Q 012645 419 KRNVSKWR 426 (459)
Q Consensus 419 ~~~a~~l~ 426 (459)
++++++.+
T Consensus 167 ~~~~~~~a 174 (177)
T 2f9f_A 167 KKDCFRRA 174 (177)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 44444433
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=98.19 E-value=0.00012 Score=70.20 Aligned_cols=98 Identities=16% Similarity=0.211 Sum_probs=69.8
Q ss_pred CceEEeeecHH-HHhcccCccceecc-----CchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCc
Q 012645 323 TGLVVRWCNQF-EVLAHQAVGCFITH-----CGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGI 396 (459)
Q Consensus 323 ~v~v~~~~p~~-~lL~~~~~~~~I~H-----GG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~ 396 (459)
++++.++.... .+++.+++ ++.- +|..++.||+++|+|+|+-|...+.......+.+. |.+...
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~-G~l~~~------- 330 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKE-GAGFEV------- 330 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHT-TCEEEC-------
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHC-CCEEEe-------
Confidence 45665655444 78877776 6541 24478999999999999877766666666666667 766443
Q ss_pred ccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHH
Q 012645 397 VTGEELNKCVNEVMDGERSQKIKRNVSKWREFAK 430 (459)
Q Consensus 397 ~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~ 430 (459)
-+++.|.+++.++++|...+.+.+++++..+.-.
T Consensus 331 ~d~~~La~ai~~ll~d~~r~~mg~~ar~~~~~~~ 364 (374)
T 2xci_A 331 KNETELVTKLTELLSVKKEIKVEEKSREIKGCYL 364 (374)
T ss_dssp CSHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcc
Confidence 2578999999999987224578888888776543
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=97.99 E-value=0.0013 Score=66.04 Aligned_cols=136 Identities=11% Similarity=0.058 Sum_probs=76.1
Q ss_pred CcEEEEEeCCccc-CCHHHHHHHHHHHHhCCCcEEEEEeCCC--CCCchhhhhhcCCCceEEeeecHH---HHhcccCcc
Q 012645 269 KSVIYVSFGSMAD-IAANQVDEIARGLKASEKPFLWVVKENE--NKLPVEFVNSVGETGLVVRWCNQF---EVLAHQAVG 342 (459)
Q Consensus 269 ~~~V~vs~Gs~~~-~~~~~~~~i~~a~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~~v~v~~~~p~~---~lL~~~~~~ 342 (459)
+.++++..|.... -..+.+...+..+.+.+.+++++..+.. ...-.......+.++.+....+.. .+++.+++
T Consensus 326 ~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD~- 404 (536)
T 3vue_A 326 KIPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGADV- 404 (536)
T ss_dssp TSCEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBCHHHHHHHHHHHHHSTTTEEEECSCCHHHHHHHHHHCSE-
T ss_pred CCcEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccCchHHHHHHHHHhhcCCceEEEEeccHHHHHHHHHhhhe-
Confidence 4467777888753 2333333333334445666666544321 001111223456788888777654 46777777
Q ss_pred ceecc---Cch-hhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecC-C----CcccHHHHHHHHHHHhc
Q 012645 343 CFITH---CGW-NSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNR-A----GIVTGEELNKCVNEVMD 411 (459)
Q Consensus 343 ~~I~H---GG~-gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~-~----~~~~~~~l~~~i~~ll~ 411 (459)
||.- =|. .+++||+++|+|+|+.... .....|..- .-|....... + ...+++.|.++|++++.
T Consensus 405 -~v~PS~~E~fgl~~lEAma~G~PvI~s~~g----G~~e~V~dg-~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~ 476 (536)
T 3vue_A 405 -LAVPSRFEPCGLIQLQGMRYGTPCACASTG----GLVDTVIEG-KTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIK 476 (536)
T ss_dssp -EEECCSCCSSCSHHHHHHHTTCCEEECSCT----HHHHHCCBT-TTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHH
T ss_pred -eecccccCCCCHHHHHHHHcCCCEEEcCCC----CchheeeCC-CCccccccCCCceeEECCCCHHHHHHHHHHHHH
Confidence 7753 233 4889999999999986542 333333333 3343222110 0 03567889999988775
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=97.79 E-value=0.0013 Score=63.83 Aligned_cols=80 Identities=14% Similarity=0.054 Sum_probs=56.2
Q ss_pred CCCceEEeeecHH---HHhcccCccceeccC---ch-hhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecC
Q 012645 321 GETGLVVRWCNQF---EVLAHQAVGCFITHC---GW-NSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNR 393 (459)
Q Consensus 321 ~~~v~v~~~~p~~---~lL~~~~~~~~I~HG---G~-gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~ 393 (459)
.++|.+.+++|+. .+++.+++ ||.-. |. .++.||+++|+|+|+ -..+ ....++.- ..|..++
T Consensus 294 ~~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v~~~-~~G~lv~--- 362 (413)
T 2x0d_A 294 GIHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLSNWH-SNIVSLE--- 362 (413)
T ss_dssp TEEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGGGTB-TTEEEES---
T ss_pred cCcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhhhcC-CCEEEeC---
Confidence 4678889999866 57777777 76421 34 467999999999997 2221 11223333 4576665
Q ss_pred CCcccHHHHHHHHHHHhcCh
Q 012645 394 AGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 394 ~~~~~~~~l~~~i~~ll~~~ 413 (459)
.-+++.|.++|.++++|+
T Consensus 363 --~~d~~~la~ai~~ll~~~ 380 (413)
T 2x0d_A 363 --QLNPENIAETLVELCMSF 380 (413)
T ss_dssp --SCSHHHHHHHHHHHHHHT
T ss_pred --CCCHHHHHHHHHHHHcCH
Confidence 467899999999999987
|
| >1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7 | Back alignment and structure |
|---|
Probab=97.77 E-value=0.0014 Score=61.90 Aligned_cols=102 Identities=10% Similarity=-0.001 Sum_probs=69.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEecCccccccCC-CCc-eEEEcCCCCCCCCCCCCCCHHHHHHHHH
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASK--RVKATLATTHYTVKSIHA-TTV-GVEPISDGFDEGGFKQAPSVKAYLESFK 83 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~--Gh~V~~~~~~~~~~~~~~-~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (459)
|||+++.....||+.=..++.++|+++ +.+|++++.+.+.+.++. +.+ +++.++.. . ...
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~~p~i~~v~~~~~~--~-----------~~~--- 64 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRMPEVNEAIPMPLG--H-----------GAL--- 64 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTCTTEEEEEEC-----------------------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcCCccCEEEEecCC--c-----------ccc---
Confidence 799999999999999999999999987 999999999988887766 445 34544310 0 000
Q ss_pred HhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEE
Q 012645 84 TVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAA 129 (459)
Q Consensus 84 ~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~ 129 (459)
....+..+.+.++.. ++|++|.=....-...++...|+|...
T Consensus 65 --~~~~~~~l~~~l~~~--~~D~vid~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 65 --EIGERRKLGHSLREK--RYDRAYVLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp --CHHHHHHHHHHTTTT--TCSEEEECSCCSGGGHHHHHTTCSEEE
T ss_pred --chHHHHHHHHHHHhc--CCCEEEECCCChHHHHHHHHhCCCEEe
Confidence 012234556666554 899998322223455677788999743
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00013 Score=60.91 Aligned_cols=139 Identities=12% Similarity=0.188 Sum_probs=81.4
Q ss_pred cEEEEEeCCcccCCHHHHHHHHHHHHhCC----CcEEEEEeCCCCCCchhhh---hhcCCCceEEeeecHH---HHhccc
Q 012645 270 SVIYVSFGSMADIAANQVDEIARGLKASE----KPFLWVVKENENKLPVEFV---NSVGETGLVVRWCNQF---EVLAHQ 339 (459)
Q Consensus 270 ~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~----~~~v~~~~~~~~~~~~~~~---~~~~~~v~v~~~~p~~---~lL~~~ 339 (459)
+++++..|+... ......+++++..+. .+++++ +. +...+.+. ...+-++++ +|+|+. .+++.+
T Consensus 2 ~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i~-G~--g~~~~~~~~~~~~~~~~v~~-g~~~~~~~~~~~~~a 75 (166)
T 3qhp_A 2 PFKIAMVGRYSN--EKNQSVLIKAVALSKYKQDIVLLLK-GK--GPDEKKIKLLAQKLGVKAEF-GFVNSNELLEILKTC 75 (166)
T ss_dssp CEEEEEESCCST--TTTHHHHHHHHHTCTTGGGEEEEEE-CC--STTHHHHHHHHHHHTCEEEC-CCCCHHHHHHHHTTC
T ss_pred ceEEEEEeccch--hcCHHHHHHHHHHhccCCCeEEEEE-eC--CccHHHHHHHHHHcCCeEEE-eecCHHHHHHHHHhC
Confidence 477888888753 234556677776653 233333 32 21222222 223347788 999865 578777
Q ss_pred Cccceec----cCchhhHHHhhhcCC-eeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcChh
Q 012645 340 AVGCFIT----HCGWNSILEGLSLGV-AVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGER 414 (459)
Q Consensus 340 ~~~~~I~----HGG~gs~~eal~~Gv-P~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~ 414 (459)
++ +|. -|...++.||+++|+ |+|+..... .....+... +. .+. .-+.+++.++|.++++|++
T Consensus 76 dv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~---~~~~~~~~~-~~--~~~-----~~~~~~l~~~i~~l~~~~~ 142 (166)
T 3qhp_A 76 TL--YVHAANVESEAIACLEAISVGIVPVIANSPLS---ATRQFALDE-RS--LFE-----PNNAKDLSAKIDWWLENKL 142 (166)
T ss_dssp SE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTC---GGGGGCSSG-GG--EEC-----TTCHHHHHHHHHHHHHCHH
T ss_pred CE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCC---chhhhccCC-ce--EEc-----CCCHHHHHHHHHHHHhCHH
Confidence 77 775 344469999999996 999933211 111111222 32 233 4689999999999999873
Q ss_pred -hHHHHHHHHHHHH
Q 012645 415 -SQKIKRNVSKWRE 427 (459)
Q Consensus 415 -~~~~~~~a~~l~~ 427 (459)
.+.+.+++++..+
T Consensus 143 ~~~~~~~~~~~~~~ 156 (166)
T 3qhp_A 143 ERERMQNEYAKSAL 156 (166)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 2344555554443
|
| >3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula} | Back alignment and structure |
|---|
Probab=97.72 E-value=0.0041 Score=58.78 Aligned_cols=105 Identities=9% Similarity=0.006 Sum_probs=75.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEecCccccccCC-CCce-EEEcCCCCCCCCCCCCCCHHHHHH
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASK--RVKATLATTHYTVKSIHA-TTVG-VEPISDGFDEGGFKQAPSVKAYLE 80 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~--Gh~V~~~~~~~~~~~~~~-~g~~-~~~~~~~~~~~~~~~~~~~~~~~~ 80 (459)
...+|||++...+.||+.-+.++.++|+++ +.+|++++.+.+.+.++. ++++ ++.++.. .....+.
T Consensus 6 l~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~p~vd~vi~~~~~----------~~~~~~~ 75 (349)
T 3tov_A 6 LDYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYNPNIDELIVVDKK----------GRHNSIS 75 (349)
T ss_dssp CTTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSCTTCSEEEEECCS----------SHHHHHH
T ss_pred CCCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcCCCccEEEEeCcc----------cccccHH
Confidence 456899999999999999999999999987 899999999999998877 5675 5666421 1111111
Q ss_pred HHHHhchHHHHHHHHHhhcCCCCc-cEEEeCCCchhHHHHHHHcCCceEE
Q 012645 81 SFKTVGSRTLAEVILKYKDSESPV-NCIVYDSLLTWALDVARQFGIYGAA 129 (459)
Q Consensus 81 ~~~~~~~~~~~~l~~~~~~~~~~~-Dlvi~D~~~~~~~~~a~~lgiP~v~ 129 (459)
.+..++++++.. ++ |++|.=....-...++...|+|...
T Consensus 76 --------~~~~l~~~Lr~~--~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 76 --------GLNEVAREINAK--GKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp --------HHHHHHHHHHHH--CCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred --------HHHHHHHHHhhC--CCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 122344444433 89 9999654445566778888999654
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=97.61 E-value=0.0012 Score=68.81 Aligned_cols=137 Identities=14% Similarity=0.129 Sum_probs=95.9
Q ss_pred CCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCC---CCCchhhhhh--cCCCceEEeeecHHHHh---ccc
Q 012645 268 EKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENE---NKLPVEFVNS--VGETGLVVRWCNQFEVL---AHQ 339 (459)
Q Consensus 268 ~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~---~~~~~~~~~~--~~~~v~v~~~~p~~~lL---~~~ 339 (459)
+..+||.||-+..+..++.+..-.+.+++.+.-.+|...... ..+...+... .++++.+.+..|..+.| ..+
T Consensus 521 ~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l~~~~~~ 600 (723)
T 4gyw_A 521 EDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRGQLA 600 (723)
T ss_dssp TTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGGHHHHHHHHHHTTCCGGGEEEEECCCHHHHHHHGGGC
T ss_pred CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHHHHHHHhcCCCcCeEEECCCCCHHHHHHHhCCC
Confidence 456999999999999999999999999998888888887643 1111111111 24678888888866544 445
Q ss_pred Cccceec---cCchhhHHHhhhcCCeeeccccc-cchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcCh
Q 012645 340 AVGCFIT---HCGWNSILEGLSLGVAVVAVPQF-SDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 340 ~~~~~I~---HGG~gs~~eal~~GvP~li~P~~-~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
|+ ++- .+|.+|++|||+.|||+|.++-. .=...-+..+..+ |+...+- .|.++-.+.-.++-+|+
T Consensus 601 Di--~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~-gl~e~ia------~~~~~Y~~~a~~la~d~ 669 (723)
T 4gyw_A 601 DV--CLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCL-GCLELIA------KNRQEYEDIAVKLGTDL 669 (723)
T ss_dssp SE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHH-TCGGGBC------SSHHHHHHHHHHHHHCH
T ss_pred eE--EeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHc-CCccccc------CCHHHHHHHHHHHhcCH
Confidence 55 654 88999999999999999999942 2333455666777 8876554 34555555555677776
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00099 Score=57.31 Aligned_cols=78 Identities=17% Similarity=0.117 Sum_probs=59.2
Q ss_pred CceE-EeeecHH---HHhcccCccceecc----CchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCC
Q 012645 323 TGLV-VRWCNQF---EVLAHQAVGCFITH----CGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRA 394 (459)
Q Consensus 323 ~v~v-~~~~p~~---~lL~~~~~~~~I~H----GG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~ 394 (459)
+|.+ .+++++. .+++.+++ +|.- |...++.||+++|+|+|+... ......+ .. +.|..++
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~~-~~-~~g~~~~---- 163 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-TN-ETGILVK---- 163 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHHHC-CT-TTCEEEC----
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCC----CChHHHc-CC-CceEEec----
Confidence 8999 8999854 67877777 6642 234688999999999988754 3444445 55 6676665
Q ss_pred CcccHHHHHHHHHHHhc-Ch
Q 012645 395 GIVTGEELNKCVNEVMD-GE 413 (459)
Q Consensus 395 ~~~~~~~l~~~i~~ll~-~~ 413 (459)
.-+.+.+.++|.++++ |+
T Consensus 164 -~~~~~~l~~~i~~l~~~~~ 182 (200)
T 2bfw_A 164 -AGDPGELANAILKALELSR 182 (200)
T ss_dssp -TTCHHHHHHHHHHHHHCCH
T ss_pred -CCCHHHHHHHHHHHHhcCH
Confidence 4588999999999999 87
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00079 Score=67.57 Aligned_cols=135 Identities=8% Similarity=0.083 Sum_probs=91.8
Q ss_pred cEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEE--eCCCCCCchhhh-----hhcCCCceEEeeecHHHHh---ccc
Q 012645 270 SVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVV--KENENKLPVEFV-----NSVGETGLVVRWCNQFEVL---AHQ 339 (459)
Q Consensus 270 ~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~--~~~~~~~~~~~~-----~~~~~~v~v~~~~p~~~lL---~~~ 339 (459)
.++|.+|++..+..++.+....+.+++.+..++|.. +... ....... ..+.+++.+.+.+|+.+.+ ..+
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~-g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~y~~a 519 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSN-GITHPYVERFIKSYLGDSATAHPHSPYHQYLRILHNC 519 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCC-GGGHHHHHHHHHHHHGGGEEEECCCCHHHHHHHHHTC
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCc-hhhHHHHHHHHHcCCCccEEEcCCCCHHHHHHHHhcC
Confidence 589999999888899999998888888777777643 3211 1111111 1234678888888876544 566
Q ss_pred Ccccee---ccCchhhHHHhhhcCCeeecccccc-chhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcCh
Q 012645 340 AVGCFI---THCGWNSILEGLSLGVAVVAVPQFS-DQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 340 ~~~~~I---~HGG~gs~~eal~~GvP~li~P~~~-DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
|+ ++ ..+|.+|++|||+.|||+|..+-.. --..-+..+... |+...+- .-+.++..+...++.+|+
T Consensus 520 DI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~-GLpE~LI-----A~d~eeYv~~Av~La~D~ 589 (631)
T 3q3e_A 520 DM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRL-GLPEWLI-----ANTVDEYVERAVRLAENH 589 (631)
T ss_dssp SE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHT-TCCGGGE-----ESSHHHHHHHHHHHHHCH
T ss_pred cE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhc-CCCccee-----cCCHHHHHHHHHHHhCCH
Confidence 66 54 3488899999999999999987432 122223445566 7765322 246778888888899997
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0021 Score=60.43 Aligned_cols=146 Identities=15% Similarity=0.101 Sum_probs=94.0
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhcCCCceEEeeecHHHH---hcccCccceecc
Q 012645 271 VIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENENKLPVEFVNSVGETGLVVRWCNQFEV---LAHQAVGCFITH 347 (459)
Q Consensus 271 ~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~v~~~~p~~~l---L~~~~~~~~I~H 347 (459)
.+++-.|+... ...+. .+ ..+.+++++..+.+. ..+ ||.+.+|+|+.++ |+.++...+.+-
T Consensus 179 ~~i~yaG~l~k--~~~L~----~l-~~~~~f~ivG~G~~~--------~l~-nV~f~G~~~~~el~~~l~~~~~~lv~~~ 242 (339)
T 3rhz_A 179 REIHFPGNPER--FSFVK----EW-KYDIPLKVYTWQNVE--------LPQ-NVHKINYRPDEQLLMEMSQGGFGLVWMD 242 (339)
T ss_dssp EEEEECSCTTT--CGGGG----GC-CCSSCEEEEESCCCC--------CCT-TEEEEECCCHHHHHHHHHTEEEEECCCC
T ss_pred cEEEEeCCcch--hhHHH----hC-CCCCeEEEEeCCccc--------CcC-CEEEeCCCCHHHHHHHHHhCCEEEEECC
Confidence 56677788764 12221 11 245666655443211 134 9999999999865 434444444433
Q ss_pred Cch---------hhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcChhhHHH
Q 012645 348 CGW---------NSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKI 418 (459)
Q Consensus 348 GG~---------gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~ 418 (459)
+.. +-+.|+|++|+|+|+.+ ...++..+++. |+|..++ +.+++.+++.++.. .+.+++
T Consensus 243 ~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~~-~~G~~~~-------~~~e~~~~i~~l~~-~~~~~m 309 (339)
T 3rhz_A 243 DKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIENN-GLGWIVK-------DVEEAIMKVKNVNE-DEYIEL 309 (339)
T ss_dssp GGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHHH-TCEEEES-------SHHHHHHHHHHCCH-HHHHHH
T ss_pred CchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHhC-CeEEEeC-------CHHHHHHHHHHhCH-HHHHHH
Confidence 333 34789999999999754 56788889999 9998775 25788888887643 345689
Q ss_pred HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Q 012645 419 KRNVSKWREFAKKAVSAGGSSDKNIDEFVVR 449 (459)
Q Consensus 419 ~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~ 449 (459)
++|+++.++++++ |.-...++.+.+..
T Consensus 310 ~~na~~~a~~~~~----~~f~k~~l~~~~~~ 336 (339)
T 3rhz_A 310 VKNVRSFNPILRK----GFFTRRLLTESVFQ 336 (339)
T ss_dssp HHHHHHHTHHHHT----THHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhc----cHHHHHHHHHHHHH
Confidence 9999999888875 33344445444443
|
| >2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A* | Back alignment and structure |
|---|
Probab=96.80 E-value=0.016 Score=54.04 Aligned_cols=53 Identities=15% Similarity=0.136 Sum_probs=45.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEecCccccccCC-CCc-eEEEc
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASK--RVKATLATTHYTVKSIHA-TTV-GVEPI 60 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~--Gh~V~~~~~~~~~~~~~~-~g~-~~~~~ 60 (459)
||||++...+.||+.=..++.++|+++ +.+|++++.+.+.+.++. +++ +++.+
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~p~vd~vi~~ 57 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPSWHAAVERVIPV 57 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHHTSTTEEEEEEE
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHhcCCCCCEEEEc
Confidence 799999999999999999999999987 899999999998887765 455 33444
|
| >3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0 | Back alignment and structure |
|---|
Probab=94.86 E-value=0.036 Score=49.08 Aligned_cols=46 Identities=13% Similarity=0.089 Sum_probs=34.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCC
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHA 52 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~ 52 (459)
+++||||+.---+. |.--+..|+++|++ +|+|+++.+...++-...
T Consensus 9 ~~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg~g~ 54 (261)
T 3ty2_A 9 TPKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRSGASN 54 (261)
T ss_dssp --CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCTTCTT
T ss_pred CCCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCcCccc
Confidence 56699988876555 55668889999976 899999999887765443
|
| >2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A | Back alignment and structure |
|---|
Probab=92.02 E-value=1.1 Score=39.38 Aligned_cols=108 Identities=14% Similarity=0.109 Sum_probs=63.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCC-----CCceEEEcCCCCC--C-CCCCCCCCHHHHH
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHA-----TTVGVEPISDGFD--E-GGFKQAPSVKAYL 79 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~-----~g~~~~~~~~~~~--~-~~~~~~~~~~~~~ 79 (459)
||||+.---+. |.--+..|+++|++.| +|+++.+...++-+.. ..+.+..++...+ . ......+....-.
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~~~~~~~~~~~~~v~GTPaDCV 78 (244)
T 2e6c_A 1 MRILVTNDDGI-YSPGLWALAEAASQFG-EVFVAAPDTEQSAAGHAITIAHPVRAYPHPSPLHAPHFPAYRVRGTPADCV 78 (244)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEECSSCCCCCSSCCCSSCBEEEECCCCTTSCCCCEEEEESCHHHHH
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccccCCCCeEEEEeccCcCCCCCceEEEcCcHHHHH
Confidence 67777765554 4455889999999888 8999999887766544 2566666643210 0 0001112222111
Q ss_pred HHHHHhchHHHHHHHHHhhcCCCCccEEEeC----------CCc---hhHHHHHHHcCCceEEEcc
Q 012645 80 ESFKTVGSRTLAEVILKYKDSESPVNCIVYD----------SLL---TWALDVARQFGIYGAAMMT 132 (459)
Q Consensus 80 ~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D----------~~~---~~~~~~a~~lgiP~v~~~~ 132 (459)
+. .+. + ..+||+||+. .++ .+|+.-|..+|||.|.+|.
T Consensus 79 ~l-------al~-----l---~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 129 (244)
T 2e6c_A 79 AL-------GLH-----L---FGPVDLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFGLSAAAFSV 129 (244)
T ss_dssp HH-------HHH-----H---SCSCCEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCEEEEEEE
T ss_pred HH-------HHc-----C---CCCCCEEEECCccCCCCCcCeechHhHHHHHHHHhcCCCeEEEec
Confidence 11 111 2 1389999963 233 3355566689999999975
|
| >1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A* | Back alignment and structure |
|---|
Probab=91.27 E-value=0.87 Score=40.06 Aligned_cols=110 Identities=11% Similarity=0.075 Sum_probs=62.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCC-----CCceEEEcCCCCCCCCCCCCCCHHHHHHHH
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHA-----TTVGVEPISDGFDEGGFKQAPSVKAYLESF 82 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (459)
||||+.---+. |.--+..|+++|++.| +|+++.+...++-+.. ..+.+..++..-........+....-.+.
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~~~~~~~~~~v~GTPaDCV~l- 77 (247)
T 1j9j_A 1 MRILVTNDDGI-QSKGIIVLAELLSEEH-EVFVVAPDKERSATGHSITIHVPLWMKKVFISERVVAYSTTGTPADCVKL- 77 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTCCCCSSCCCEEECCCSSSEEEEEESSCHHHHHHH-
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccccCCCCeEEEEeccCCCCceEEECCcHHHHHHH-
Confidence 67777765454 4455889999999888 8999999887765544 24555554321000000111222211111
Q ss_pred HHhchHHHHHHHHHhhcCCCCccEEEeC----------CCc---hhHHHHHHHcCCceEEEcc
Q 012645 83 KTVGSRTLAEVILKYKDSESPVNCIVYD----------SLL---TWALDVARQFGIYGAAMMT 132 (459)
Q Consensus 83 ~~~~~~~~~~l~~~~~~~~~~~Dlvi~D----------~~~---~~~~~~a~~lgiP~v~~~~ 132 (459)
.+..++ . .+||+||+. .++ .+|+.-|..+|||.|.+|.
T Consensus 78 ------al~~l~----~--~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 128 (247)
T 1j9j_A 78 ------AYNVVM----D--KRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISS 128 (247)
T ss_dssp ------HHHTTS----T--TCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred ------HHHhhc----c--CCCCEEEECCccCCCCCcCeecchhHHHHHHHHhcCCCeEEEec
Confidence 112222 1 289999963 233 3355566688999999975
|
| >1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1 | Back alignment and structure |
|---|
Probab=89.10 E-value=2.1 Score=38.32 Aligned_cols=109 Identities=10% Similarity=-0.029 Sum_probs=63.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCC-----CCceEEEcCCCCCCCCCCCCCCHHHHHHHH
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHA-----TTVGVEPISDGFDEGGFKQAPSVKAYLESF 82 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (459)
||||+.---+. +.--+..|+++|++.| +|+++.+...++-+.. ..+.+..++.. ........+....-.
T Consensus 1 M~ILlTNDDGi-~ApGi~aL~~aL~~~g-~V~VVAP~~~qSg~g~siTl~~pl~~~~~~~~-~~~~~~v~GTPaDCV--- 74 (280)
T 1l5x_A 1 MKILVTNDDGV-HSPGLRLLYQFALSLG-DVDVVAPESPKSATGLGITLHKPLRMYEVDLC-GFRAIATSGTPSDTV--- 74 (280)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHGGGS-EEEEEEESSCTTTSCSSCCCSSCBCEEEEECS-SSEEEEESSCHHHHH---
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccccCCCCeEEEEeccC-CCceEEECCcHHHHH---
Confidence 67777765554 4455889999999888 9999999887765544 24444444321 000001112222111
Q ss_pred HHhchHHHHHHHHHhhcCCCCccEEEeC-----------CCc---hhHHHHHHHcCCceEEEccc
Q 012645 83 KTVGSRTLAEVILKYKDSESPVNCIVYD-----------SLL---TWALDVARQFGIYGAAMMTN 133 (459)
Q Consensus 83 ~~~~~~~~~~l~~~~~~~~~~~Dlvi~D-----------~~~---~~~~~~a~~lgiP~v~~~~~ 133 (459)
.-.+..+ . .+||+||+. .++ .+|+.-|..+|||.|.+|..
T Consensus 75 ----~lal~~l-----~--~~PDLVvSGIN~G~Nlg~d~v~ySGTVgAA~Ea~~~GiPaIA~S~~ 128 (280)
T 1l5x_A 75 ----YLATFGL-----G--RKYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSAY 128 (280)
T ss_dssp ----HHHHHHH-----T--SCCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEEEEEEC
T ss_pred ----HHHHhcC-----C--CCCCEEEECCccCCcCCccccccchhHHHHHHHHHcCCCeEEEEcc
Confidence 1112222 1 289999963 222 33555566889999999863
|
| >1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A* | Back alignment and structure |
|---|
Probab=88.84 E-value=2.5 Score=35.74 Aligned_cols=98 Identities=14% Similarity=0.113 Sum_probs=64.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCcc------ccccCCCCceEEEcCCCCCCCCCCCCCCHHHHHH
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYT------VKSIHATTVGVEPISDGFDEGGFKQAPSVKAYLE 80 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (459)
+-.|++++..+.|-..-.+.+|-+.+.+|++|.|+..-.. ...++.-++++.....++.. .......
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~L~v~~~~~g~gf~~----~~~~~~~--- 100 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEPHGVEFQVMATGFTW----ETQNREA--- 100 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGGGTCEEEECCTTCCC----CGGGHHH---
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHhCCcEEEEccccccc----CCCCcHH---
Confidence 3468899988999999999999999999999999965432 12233336888877764432 1111111
Q ss_pred HHHHhchHHHHHHHHHhhcCCCCccEEEeCCCch
Q 012645 81 SFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLT 114 (459)
Q Consensus 81 ~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~ 114 (459)
-.......+....+.+.+ .++|+||.|.+..
T Consensus 101 -~~~~a~~~l~~a~~~l~~--~~yDlvILDEi~~ 131 (196)
T 1g5t_A 101 -DTAACMAVWQHGKRMLAD--PLLDMVVLDELTY 131 (196)
T ss_dssp -HHHHHHHHHHHHHHHTTC--TTCSEEEEETHHH
T ss_pred -HHHHHHHHHHHHHHHHhc--CCCCEEEEeCCCc
Confidence 112224455555555543 3899999998754
|
| >1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A* | Back alignment and structure |
|---|
Probab=88.28 E-value=0.66 Score=36.85 Aligned_cols=40 Identities=5% Similarity=-0.039 Sum_probs=36.1
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|++.||++.+.++.+|-....-++..|..+|++|++++..
T Consensus 1 ~~~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~ 40 (137)
T 1ccw_A 1 MEKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVL 40 (137)
T ss_dssp CCCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCC
Confidence 4567999999999999999999999999999999988764
|
| >2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A | Back alignment and structure |
|---|
Probab=87.81 E-value=1.6 Score=38.62 Aligned_cols=44 Identities=11% Similarity=0.115 Sum_probs=33.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCC
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHA 52 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~ 52 (459)
.||||+.---+. |.--+..|+++|++.| +|+++.+...++-+..
T Consensus 1 ~M~ILlTNDDGi-~apGi~aL~~~L~~~g-~V~VVAP~~~~Sg~g~ 44 (254)
T 2v4n_A 1 SMRILLSNDDGV-HAPGIQTLAKALREFA-DVQVVAPDRNRSGASN 44 (254)
T ss_dssp CCEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTT
T ss_pred CCeEEEEcCCCC-CCHHHHHHHHHHHhCC-cEEEEeeCCCCcCccC
Confidence 388888776555 5556888999998876 9999999887765544
|
| >2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=87.11 E-value=1.6 Score=38.52 Aligned_cols=109 Identities=9% Similarity=0.060 Sum_probs=60.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCC-----CCceEEEcCCCCCCCCCCCCCCHHHHHHHH
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHA-----TTVGVEPISDGFDEGGFKQAPSVKAYLESF 82 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (459)
+|||+.---+. +.--+..|+++|.+.| +|+++.+...++-+.. ..+.+........ ....+....-.
T Consensus 2 p~ILlTNDDGi-~apGi~~L~~~l~~~g-~V~VvAP~~~~Sg~g~siT~~~pl~~~~~~~~~~---~~v~GTPaDCV--- 73 (251)
T 2wqk_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSLTFTEPLKMRKIDTDFY---TVIDGTPADCV--- 73 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSCCCSSCEEEEEEETTEE---EETTCCHHHHH---
T ss_pred CEEEEEcCCCC-CcHHHHHHHHHHHhCC-CEEEEeeCCCCcccccCcCCCCCceeEEeeccce---eecCCChHHHH---
Confidence 36666654443 4445788999999998 5999998877765443 2344444321100 00111211111
Q ss_pred HHhchHHHHHHHHHhhcCCCCccEEEe----------CCCc---hhHHHHHHHcCCceEEEccc
Q 012645 83 KTVGSRTLAEVILKYKDSESPVNCIVY----------DSLL---TWALDVARQFGIYGAAMMTN 133 (459)
Q Consensus 83 ~~~~~~~~~~l~~~~~~~~~~~Dlvi~----------D~~~---~~~~~~a~~lgiP~v~~~~~ 133 (459)
.-.+..++. + .+||+||+ |.++ .+|+.-|..+|||.|.+|..
T Consensus 74 ----~lal~~~l~---~--~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~~ 128 (251)
T 2wqk_A 74 ----HLGYRVILE---E--KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAF 128 (251)
T ss_dssp ----HHHHHTTTT---T--CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEE
T ss_pred ----hhhhhhhcC---C--CCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEcc
Confidence 111112221 1 28999997 3333 34566667889999999853
|
| >2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A | Back alignment and structure |
|---|
Probab=85.85 E-value=5.7 Score=32.87 Aligned_cols=133 Identities=14% Similarity=0.120 Sum_probs=69.6
Q ss_pred hhhhhhhccCCCCcEEEEEeCC-cccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhcCCCceEEeeecHH-H
Q 012645 257 DQCMRWLATKPEKSVIYVSFGS-MADIAANQVDEIARGLKASEKPFLWVVKENENKLPVEFVNSVGETGLVVRWCNQF-E 334 (459)
Q Consensus 257 ~~l~~~l~~~~~~~~V~vs~Gs-~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~v~~~~p~~-~ 334 (459)
.++-++|...+ ...|+-|. .. .+....++....+-+++-+++......+... -....+.+..+.. .
T Consensus 35 ~~lg~~La~~g---~~lVsGGg~~G-----im~aa~~gAl~~gG~tigVlP~~~~~~~~~~----~~~~i~~~~~~~Rk~ 102 (176)
T 2iz6_A 35 NELGKQIATHG---WILLTGGRSLG-----VMHEAMKGAKEAGGTTIGVLPGPDTSEISDA----VDIPIVTGLGSARDN 102 (176)
T ss_dssp HHHHHHHHHTT---CEEEEECSSSS-----HHHHHHHHHHHTTCCEEEEECC-----CCTT----CSEEEECCCCSSSCC
T ss_pred HHHHHHHHHCC---CEEEECCCccC-----HhHHHHHHHHHcCCEEEEEeCchhhhhhccC----CceeEEcCCHHHHHH
Confidence 34666776653 55555555 43 4556666666666677766543211111110 0122334555655 3
Q ss_pred Hhc-ccCccceeccCchhhHHH---hhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHh
Q 012645 335 VLA-HQAVGCFITHCGWNSILE---GLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVM 410 (459)
Q Consensus 335 lL~-~~~~~~~I~HGG~gs~~e---al~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll 410 (459)
++. .++ ..++--||+||..| ++.+++|++++|.+. .....+... ....... .-+++++.+.+.+.+
T Consensus 103 ~m~~~sd-a~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~~-~~~~i~~-----~~~~~e~~~~l~~~~ 172 (176)
T 2iz6_A 103 INALSSN-VLVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTSL-DAGLVHV-----AADVAGAIAAVKQLL 172 (176)
T ss_dssp CCGGGCS-EEEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHHH-CTTTEEE-----ESSHHHHHHHHHHHH
T ss_pred HHHHhCC-EEEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccCChh-hcCeEEE-----cCCHHHHHHHHHHHH
Confidence 332 344 44666799998665 567999999999832 111122222 2222222 356777777776665
Q ss_pred c
Q 012645 411 D 411 (459)
Q Consensus 411 ~ 411 (459)
.
T Consensus 173 ~ 173 (176)
T 2iz6_A 173 A 173 (176)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=85.09 E-value=3.4 Score=37.94 Aligned_cols=35 Identities=11% Similarity=0.114 Sum_probs=24.9
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|++|||+|+..+.++ ++.-++|.++||+|..+.+.
T Consensus 5 ~~~mrivf~Gt~~fa-----~~~L~~L~~~~~~v~~Vvt~ 39 (318)
T 3q0i_A 5 SQSLRIVFAGTPDFA-----ARHLAALLSSEHEIIAVYTQ 39 (318)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHTSSSEEEEEECC
T ss_pred ccCCEEEEEecCHHH-----HHHHHHHHHCCCcEEEEEcC
Confidence 568999999876443 34567788889998877763
|
| >1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A* | Back alignment and structure |
|---|
Probab=84.38 E-value=1.5 Score=37.55 Aligned_cols=47 Identities=9% Similarity=0.087 Sum_probs=39.1
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCC
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHAT 53 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~ 53 (459)
++++||++...|+.+-+. ...+.+.|+++| +|.++.++.-..++...
T Consensus 17 l~~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~fv~~~ 63 (209)
T 1mvl_A 17 PRKPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHFLDKL 63 (209)
T ss_dssp --CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGTCCGG
T ss_pred cCCCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHhcCHH
Confidence 556899999999988776 899999999999 99999999887776553
|
| >4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A* | Back alignment and structure |
|---|
Probab=84.27 E-value=5 Score=33.70 Aligned_cols=78 Identities=12% Similarity=0.062 Sum_probs=51.5
Q ss_pred cEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEecCcccc---cc--CCCCceEEEcCCCCCCCCCCCCCCHHHHHH
Q 012645 8 VHVLVLTY--PAQGHINPLLQFAKRLASKRVKATLATTHYTVK---SI--HATTVGVEPISDGFDEGGFKQAPSVKAYLE 80 (459)
Q Consensus 8 ~kil~~~~--~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~---~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (459)
||++.++. |+-|=..=...||..|+++|++|.++-.+.... .. ...++.+.+.+.
T Consensus 1 M~vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~~~~~~~~~~~~~~~~~~~~~~~------------------ 62 (206)
T 4dzz_A 1 MKVISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDPQMSLTNWSKAGKAAFDVFTAAS------------------ 62 (206)
T ss_dssp CEEEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHTTSCCSSEEEECCS------------------
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCCCCCHHHHHhcCCCCCcEEecCc------------------
Confidence 56666654 688889999999999999999999997653221 11 112444443321
Q ss_pred HHHHhchHHHHHHHHHhhcCCCCccEEEeCCCc
Q 012645 81 SFKTVGSRTLAEVILKYKDSESPVNCIVYDSLL 113 (459)
Q Consensus 81 ~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~ 113 (459)
..+.++++.+.. ++|+||.|.-.
T Consensus 63 -------~~l~~~l~~l~~---~yD~viiD~~~ 85 (206)
T 4dzz_A 63 -------EKDVYGIRKDLA---DYDFAIVDGAG 85 (206)
T ss_dssp -------HHHHHTHHHHTT---TSSEEEEECCS
T ss_pred -------HHHHHHHHHhcC---CCCEEEEECCC
Confidence 344555565542 68999999653
|
| >1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A | Back alignment and structure |
|---|
Probab=83.87 E-value=2.7 Score=38.50 Aligned_cols=97 Identities=8% Similarity=-0.021 Sum_probs=54.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccc--------------cccCCCCceEEEcCCCCCCCCCCC
Q 012645 6 ERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTV--------------KSIHATTVGVEPISDGFDEGGFKQ 71 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~--------------~~~~~~g~~~~~~~~~~~~~~~~~ 71 (459)
++|||+|+..+.++ ....++|.+.||+|..+.+...+ +.+.+.|+.+.. |..+
T Consensus 2 ~~mrIvf~Gt~~fa-----~~~L~~L~~~~~~i~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIpv~~-~~~~------- 68 (314)
T 1fmt_A 2 ESLRIIFAGTPDFA-----ARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQ-PVSL------- 68 (314)
T ss_dssp CCCEEEEEECSHHH-----HHHHHHHHHTTCEEEEEECCCCBC------CBCCHHHHHHHHTTCCEEC-CSCS-------
T ss_pred CCCEEEEEecCHHH-----HHHHHHHHHCCCcEEEEEeCCCCccccccccCcCHHHHHHHHcCCcEEe-cCCC-------
Confidence 57999999876543 44457777789999877664221 112224665542 1110
Q ss_pred CCCHHHHHHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCc-hhHHHHHHHcCCceEEEccch
Q 012645 72 APSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLL-TWALDVARQFGIYGAAMMTNS 134 (459)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~-~~~~~~a~~lgiP~v~~~~~~ 134 (459)
. .+.+.+.++.+ +||+||+=.+. .....+-+.....++-+.++.
T Consensus 69 -~-------------~~~~~~~l~~~-----~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpSL 113 (314)
T 1fmt_A 69 -R-------------PQENQQLVAEL-----QADVMVVVAYGLILPKAVLEMPRLGCINVHGSL 113 (314)
T ss_dssp -C-------------SHHHHHHHHHT-----TCSEEEEESCCSCCCHHHHHSSTTCEEEEESSS
T ss_pred -C-------------CHHHHHHHHhc-----CCCEEEEeeccccCCHHHHhhccCCEEEEcCCc
Confidence 0 12233444554 89999875543 334444455556677776654
|
| >3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii} | Back alignment and structure |
|---|
Probab=83.09 E-value=6.2 Score=38.30 Aligned_cols=88 Identities=15% Similarity=0.113 Sum_probs=55.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcCCCCCCCCCCCCCCHHHHHHHHHHhc
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDEGGFKQAPSVKAYLESFKTVG 86 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (459)
..|++++. +-.-.+.+++.|.+.|-+|+.+++....+..++... .. . ...+.
T Consensus 313 Gkrv~i~~-----~~~~~~~l~~~L~elGm~vv~~~~~~~~~~~~~~~~---------~~-v--~~~D~----------- 364 (458)
T 3pdi_B 313 SARTAIAA-----DPDLLLGFDALLRSMGAHTVAAVVPARAAALVDSPL---------PS-V--RVGDL----------- 364 (458)
T ss_dssp TCEEEEEC-----CHHHHHHHHHHHHTTTCEEEEEEESSCCSCCTTTTS---------SC-E--EESHH-----------
T ss_pred CCEEEEEC-----CcHHHHHHHHHHHHCCCEEEEEEECCCChhhhhCcc---------Cc-E--EeCCH-----------
Confidence 35777753 334567899999999999998887654332221110 00 0 00111
Q ss_pred hHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEc
Q 012645 87 SRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMM 131 (459)
Q Consensus 87 ~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~ 131 (459)
..+.+++++. +||++|.+.. ...+|+++|||++.++
T Consensus 365 -~~le~~i~~~-----~pDllig~~~---~~~~a~k~gip~~~~g 400 (458)
T 3pdi_B 365 -EDLEHAARAG-----QAQLVIGNSH---ALASARRLGVPLLRAG 400 (458)
T ss_dssp -HHHHHHHHHH-----TCSEEEECTT---HHHHHHHTTCCEEECS
T ss_pred -HHHHHHHHhc-----CCCEEEEChh---HHHHHHHcCCCEEEec
Confidence 1244555554 8999999854 6778999999999864
|
| >2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824} | Back alignment and structure |
|---|
Probab=82.81 E-value=8 Score=32.60 Aligned_cols=108 Identities=18% Similarity=0.199 Sum_probs=62.8
Q ss_pred cCHHHHHHHHHHHHhCCCeEEEEecCccccccCC-CCceEEEcCCC-------------CCCC-----CCCCCCCHHHHH
Q 012645 19 GHINPLLQFAKRLASKRVKATLATTHYTVKSIHA-TTVGVEPISDG-------------FDEG-----GFKQAPSVKAYL 79 (459)
Q Consensus 19 GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~-~g~~~~~~~~~-------------~~~~-----~~~~~~~~~~~~ 79 (459)
|.+.-.+.+|+.+ +.|.+|.+.-+. ....+++ .++..+.++-. .... ......... .+
T Consensus 36 ~~l~~~v~~a~~~-~~~~dVIISRGg-ta~~lr~~~~iPVV~I~~s~~Dil~al~~a~~~~~kIavvg~~~~~~~~~-~~ 112 (196)
T 2q5c_A 36 ASLTRASKIAFGL-QDEVDAIISRGA-TSDYIKKSVSIPSISIKVTRFDTMRAVYNAKRFGNELALIAYKHSIVDKH-EI 112 (196)
T ss_dssp CCHHHHHHHHHHH-TTTCSEEEEEHH-HHHHHHTTCSSCEEEECCCHHHHHHHHHHHGGGCSEEEEEEESSCSSCHH-HH
T ss_pred CCHHHHHHHHHHh-cCCCeEEEECCh-HHHHHHHhCCCCEEEEcCCHhHHHHHHHHHHhhCCcEEEEeCcchhhHHH-HH
Confidence 5567777888888 888886665544 3333333 34555555410 0000 001112222 22
Q ss_pred HHHHHh--------chHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccch
Q 012645 80 ESFKTV--------GSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNS 134 (459)
Q Consensus 80 ~~~~~~--------~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~ 134 (459)
..+... ..+.+...++++.+. +.|+||.| ..+..+|+++|+|.+.+.+..
T Consensus 113 ~~ll~~~i~~~~~~~~~e~~~~i~~l~~~--G~~vvVG~---~~~~~~A~~~Gl~~vli~sg~ 170 (196)
T 2q5c_A 113 EAMLGVKIKEFLFSSEDEITTLISKVKTE--NIKIVVSG---KTVTDEAIKQGLYGETINSGE 170 (196)
T ss_dssp HHHHTCEEEEEEECSGGGHHHHHHHHHHT--TCCEEEEC---HHHHHHHHHTTCEEEECCCCH
T ss_pred HHHhCCceEEEEeCCHHHHHHHHHHHHHC--CCeEEECC---HHHHHHHHHcCCcEEEEecCH
Confidence 222221 134556677777666 89999999 447899999999999988754
|
| >3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=82.80 E-value=1.9 Score=36.70 Aligned_cols=47 Identities=19% Similarity=-0.006 Sum_probs=38.6
Q ss_pred CCCcEEEEEcCCCccCHH-HHHHHHHHHHhCCCeEEEEecCccccccCC
Q 012645 5 RERVHVLVLTYPAQGHIN-PLLQFAKRLASKRVKATLATTHYTVKSIHA 52 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~-p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~ 52 (459)
++.+||++.-.|+ +..+ -.+.+.+.|+++|++|.++.++.-..++..
T Consensus 5 l~~k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~~~i~~ 52 (201)
T 3lqk_A 5 FAGKHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHTVQTTDTK 52 (201)
T ss_dssp CTTCEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSCSCCTTCC
T ss_pred cCCCEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChhHHHHHHH
Confidence 4567898888888 4555 789999999999999999999987776653
|
| >2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A | Back alignment and structure |
|---|
Probab=82.63 E-value=2.7 Score=38.78 Aligned_cols=103 Identities=7% Similarity=-0.136 Sum_probs=54.4
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEec-Ccc-------ccccCCCCceEEEcCCCCCCCCCCCCCCHH
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT-HYT-------VKSIHATTVGVEPISDGFDEGGFKQAPSVK 76 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~-~~~-------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 76 (459)
|.+|||+|+. --+-...+.++|.+.||+|..+.+ ++. ++.+++.|+.+...+. +.. .
T Consensus 20 ~~~mrIvf~G-----~~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~~~~~v~~~A~~~gIpv~~~~~-~~~------~--- 84 (329)
T 2bw0_A 20 FQSMKIAVIG-----QSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKADPLGLEAEKDGVPVFKYSR-WRA------K--- 84 (329)
T ss_dssp -CCCEEEEEC-----CHHHHHHHHHHHHHTTCEEEEEEECCCCSSCCCHHHHHHHHHTCCEEECSC-CEE------T---
T ss_pred CCCCEEEEEc-----CcHHHHHHHHHHHHCCCeEEEEEeCCCcCCCCCHHHHHHHHcCCCEEecCc-ccc------c---
Confidence 4569999993 123333567889889999887765 221 1122224666655431 000 0
Q ss_pred HHHHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCc-hhHHHHHHHcCCceEEEccch
Q 012645 77 AYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLL-TWALDVARQFGIYGAAMMTNS 134 (459)
Q Consensus 77 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~-~~~~~~a~~lgiP~v~~~~~~ 134 (459)
....+.+.+.++.+ ++|++|+=.+. .....+-+.....++-+.++.
T Consensus 85 -------~~~~~~~~~~l~~~-----~~Dliv~a~y~~ilp~~il~~~~~g~iNiHpSL 131 (329)
T 2bw0_A 85 -------GQALPDVVAKYQAL-----GAELNVLPFCSQFIPMEIISAPRHGSIIYHPSL 131 (329)
T ss_dssp -------TEECHHHHHHHHTT-----CCSEEEESSCSSCCCHHHHTCSTTCEEEEESSC
T ss_pred -------ccccHHHHHHHHhc-----CCCEEEEeehhhhCCHHHHhhCcCCEEEEcCCc
Confidence 01112223334443 89999976553 223344445555677766554
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=81.35 E-value=1.8 Score=44.06 Aligned_cols=47 Identities=13% Similarity=0.118 Sum_probs=33.8
Q ss_pred CCCceEE---eeecH---------HHHhcccCccceecc---Cch-hhHHHhhhcCCeeeccccc
Q 012645 321 GETGLVV---RWCNQ---------FEVLAHQAVGCFITH---CGW-NSILEGLSLGVAVVAVPQF 369 (459)
Q Consensus 321 ~~~v~v~---~~~p~---------~~lL~~~~~~~~I~H---GG~-gs~~eal~~GvP~li~P~~ 369 (459)
.++|+++ .|++. .++++.+++ ||.- =|+ .+.+||+++|+|+|+.-..
T Consensus 489 ~drVKVIf~P~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~g 551 (725)
T 3nb0_A 489 SDRVKMIFHPEFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVS 551 (725)
T ss_dssp TCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTB
T ss_pred CCceeEEEeccccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCC
Confidence 3566665 67754 468888888 7754 344 5899999999999986543
|
| >3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0 | Back alignment and structure |
|---|
Probab=80.32 E-value=2.7 Score=34.77 Aligned_cols=44 Identities=20% Similarity=0.200 Sum_probs=37.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCC
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHA 52 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~ 52 (459)
+||++.-.|+.|=+. ...+.+.|+++|++|.++.++.-..++..
T Consensus 6 k~IllgvTGs~aa~k-~~~ll~~L~~~g~~V~vv~T~~A~~fi~~ 49 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN-ISHYIIELKSKFDEVNVIASTNGRKFING 49 (175)
T ss_dssp CEEEEEECSSGGGGG-HHHHHHHHTTTCSEEEEEECTGGGGGSCH
T ss_pred CEEEEEEeCHHHHHH-HHHHHHHHHHCCCEEEEEECcCHHHHhhH
Confidence 688888888877665 89999999999999999999988777654
|
| >3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A* | Back alignment and structure |
|---|
Probab=80.31 E-value=8.8 Score=33.78 Aligned_cols=37 Identities=14% Similarity=0.176 Sum_probs=30.8
Q ss_pred CCcEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEe
Q 012645 6 ERVHVLVLTY--PAQGHINPLLQFAKRLASKRVKATLAT 42 (459)
Q Consensus 6 ~~~kil~~~~--~~~GH~~p~~~la~~L~~~Gh~V~~~~ 42 (459)
++||.+|++. ..-|=..-.+.|+++|+++|++|.++=
T Consensus 24 ~~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fK 62 (251)
T 3fgn_A 24 SHMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCK 62 (251)
T ss_dssp SSCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEe
Confidence 5677777775 367788889999999999999999975
|
| >3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii} | Back alignment and structure |
|---|
Probab=80.23 E-value=8.6 Score=33.32 Aligned_cols=105 Identities=11% Similarity=0.061 Sum_probs=61.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEecCc-c---ccccCCCCceEEEcCC-CCCCCCCCCCCCHHHH
Q 012645 6 ERVHVLVLTYPAQGHINPLLQFAKRLASK--RVKATLATTHY-T---VKSIHATTVGVEPISD-GFDEGGFKQAPSVKAY 78 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p~~~la~~L~~~--Gh~V~~~~~~~-~---~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~ 78 (459)
++|||+|+..|+.. -+.++.++|.+. +++|..+.+.. . .+.+++.|+.+..++. .+. +-
T Consensus 21 ~~~rI~~l~SG~g~---~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~gIp~~~~~~~~~~--------~r--- 86 (229)
T 3auf_A 21 HMIRIGVLISGSGT---NLQAILDGCREGRIPGRVAVVISDRADAYGLERARRAGVDALHMDPAAYP--------SR--- 86 (229)
T ss_dssp TCEEEEEEESSCCH---HHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHTTCEEEECCGGGSS--------SH---
T ss_pred CCcEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHcCCCEEEECccccc--------ch---
Confidence 34799999877743 256677777766 68887666542 1 2334557888886642 111 00
Q ss_pred HHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCc-hhHHHHHHHcCCceEEEccch
Q 012645 79 LESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLL-TWALDVARQFGIYGAAMMTNS 134 (459)
Q Consensus 79 ~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~-~~~~~~a~~lgiP~v~~~~~~ 134 (459)
....+.+.+.++.+ +||+||.=.+. .....+-+.+...++-+.++.
T Consensus 87 -----~~~~~~~~~~l~~~-----~~Dliv~agy~~IL~~~~l~~~~~~~iNiHpSL 133 (229)
T 3auf_A 87 -----TAFDAALAERLQAY-----GVDLVCLAGYMRLVRGPMLTAFPNRILNIHPSL 133 (229)
T ss_dssp -----HHHHHHHHHHHHHT-----TCSEEEESSCCSCCCHHHHHHSTTCEEEEESSC
T ss_pred -----hhccHHHHHHHHhc-----CCCEEEEcChhHhCCHHHHhhccCCEEEEccCc
Confidence 11122333444554 89999976553 334455566666777776644
|
| >2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A* | Back alignment and structure |
|---|
Probab=80.02 E-value=1.9 Score=37.99 Aligned_cols=44 Identities=11% Similarity=-0.022 Sum_probs=37.6
Q ss_pred CCCcEEEEEcCC---CccCHHHHHHHHHHHHhCCCeEEEEecCcccc
Q 012645 5 RERVHVLVLTYP---AQGHINPLLQFAKRLASKRVKATLATTHYTVK 48 (459)
Q Consensus 5 ~~~~kil~~~~~---~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~ 48 (459)
|..||.+|+|.| +.|-=.-...|+..|++||++|+..--+.+..
T Consensus 20 ~~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DPYlN 66 (295)
T 2vo1_A 20 FQSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYIN 66 (295)
T ss_dssp -CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEECSSC
T ss_pred cccceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeeccccee
Confidence 678999999987 67777789999999999999999998776654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 459 | ||||
| d2pq6a1 | 473 | c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransfe | 8e-93 | |
| d2vcha1 | 471 | c.87.1.10 (A:6-476) Hydroquinone glucosyltransfera | 5e-91 | |
| d2c1xa1 | 450 | c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-gluc | 7e-90 | |
| d2acva1 | 461 | c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transf | 6e-79 | |
| d1rrva_ | 401 | c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Am | 1e-41 | |
| d1iira_ | 401 | c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycol | 6e-41 | |
| d1pn3a_ | 391 | c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA | 9e-31 |
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} Length = 473 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Score = 287 bits (733), Expect = 8e-93
Identities = 135/470 (28%), Positives = 222/470 (47%), Gaps = 36/470 (7%)
Query: 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATT----------VGVE 58
HV+++ YP QGHINPL + AK L + T T Y K + + E
Sbjct: 3 HVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFE 62
Query: 59 PISDGFD--EGGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDS--ESPVNCIVYDSLLT 114
I DG EG + V +S + + E++ + S PV C+V D ++
Sbjct: 63 SIPDGLTPMEGDGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMS 122
Query: 115 WALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQ-----------ETVPLTLP 163
+ + A +F + ++SA + + ET +P
Sbjct: 123 FTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERGIIPFKDESYLTNGCLETKVDWIP 182
Query: 164 GLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLW 223
GL + D+ F+ N L +E +NK+ +L N+F ELE +++ A+
Sbjct: 183 GLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVINALSSTI 242
Query: 224 PLVM-IGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADI 282
P + IGPL QI + +N+W+ +C+ WL +K SV+YV+FGS +
Sbjct: 243 PSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKED-TECLDWLESKEPGSVVYVNFGSTTVM 301
Query: 283 AANQVDEIARGLKASEKPFLWVVKEN-----ENKLPVEFVNSVGETGLVVRWCNQFEVLA 337
Q+ E A GL +K FLW+++ + EF N + + GL+ WC Q +VL
Sbjct: 302 TPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDKVLN 361
Query: 338 HQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIV 397
H ++G F+THCGWNS E + GV ++ P F+DQPT+ +F+ WE+G+ N V
Sbjct: 362 HPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTN----V 417
Query: 398 TGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFV 447
EEL K +NEV+ G++ +K+K+ + ++ A++ GG S N+++ +
Sbjct: 418 KREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVI 467
|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 471 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 282 bits (721), Expect = 5e-91
Identities = 114/467 (24%), Positives = 197/467 (42%), Gaps = 38/467 (8%)
Query: 9 HVLVLTYPAQGHINPLLQFAKRLASKR-VKATLATTHYTVKS------IHATTVGVEPIS 61
HV ++ P GH+ PL++FAKRL + T S + + + +
Sbjct: 3 HVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVF 62
Query: 62 -DGFDEGGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVA 120
D + +++ + T + L +V + + +V D T A DVA
Sbjct: 63 LPPVDLTDLSSSTRIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVA 122
Query: 121 RQFGIYGAAMMTNSASVCSMY--WQINHGLLTLPVNQETVPLTLPGLPSLASSDLPSFLA 178
+F + +A+V S + ++ + T PL LPG +A D
Sbjct: 123 VEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCEFRELTEPLMLPGCVPVAGKDFLDPAQ 182
Query: 179 QPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAYLD 238
+L + + +L N+F ELE ++A+ P+ P L
Sbjct: 183 DR--KDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDK--PPVYPVGPLV 238
Query: 239 QQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASE 298
+ +C++WL +P SV+YVSFGS + Q++E+A GL SE
Sbjct: 239 N------IGKQEAKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSE 292
Query: 299 KPFLWVVK-----------------ENENKLPVEFVNSVGETGLVVR-WCNQFEVLAHQA 340
+ FLWV++ + LP F+ + G V+ W Q +VLAH +
Sbjct: 293 QRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPS 352
Query: 341 VGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGE 400
G F+THCGWNS LE + G+ ++A P +++Q NA + E +R + G+V E
Sbjct: 353 TGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVRRE 412
Query: 401 ELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFV 447
E+ + V +M+GE + ++ + + +E A + + G+S K +
Sbjct: 413 EVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVA 459
|
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} Length = 450 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Score = 278 bits (712), Expect = 7e-90
Identities = 128/456 (28%), Positives = 207/456 (45%), Gaps = 34/456 (7%)
Query: 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTV-------KSIHATTVGV--EP 59
HV VL +P H PLL +RLA+ A + + S+H +
Sbjct: 3 HVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYD 62
Query: 60 ISDGFDEGGFKQAPSVKAYLESFKTVGSRTLAEVIL-KYKDSESPVNCIVYDSLLTWALD 118
ISDG EG + A + +E F + + ++ ++ PV+C+V D+ + +A D
Sbjct: 63 ISDGVPEG-YVFAGRPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAAD 121
Query: 119 VARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPV-----NQETVPLTLPGLPSLASSDL 173
+A + G+ T + S + I+ + V ++ + +PG+ + DL
Sbjct: 122 MAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVSGIQGREDELLNFIPGMSKVRFRDL 181
Query: 174 PSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLV-MIGPLV 232
+ N + + L K V NSFEEL+ L + IGP
Sbjct: 182 QEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSKLKTYLNIGPFN 241
Query: 233 PSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIAR 292
P C++WL + SV+Y+SFG++ +V ++
Sbjct: 242 LITPPP-------------VVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSE 288
Query: 293 GLKASEKPFLWVVKEN-ENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWN 351
L+AS PF+W +++ LP F+ G+VV W Q EVLAH+AVG F+THCGWN
Sbjct: 289 ALEASRVPFIWSLRDKARVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWN 348
Query: 352 SILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMD 411
S+ E ++ GV ++ P F DQ N + VE+V E+GVR + G+ T L C ++++
Sbjct: 349 SLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEG---GVFTKSGLMSCFDQILS 405
Query: 412 GERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFV 447
E+ +K++ N+ RE A +AV GSS +N V
Sbjct: 406 QEKGKKLRENLRALRETADRAVGPKGSSTENFITLV 441
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} Length = 461 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Score = 250 bits (639), Expect = 6e-79
Identities = 98/466 (21%), Positives = 194/466 (41%), Gaps = 29/466 (6%)
Query: 1 MENQRERVHVLVLTYPAQGHINPLLQFAKRLASK--RVKATLATTHYTVKSIHATT---- 54
M + + ++ + P GH+ L+FAK L + + T+ + +
Sbjct: 1 MSDINKNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSV 60
Query: 55 ------VGVEPISDGFDEGGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIV 108
+ + + + + S + Y+ +F + I + V +V
Sbjct: 61 LASQPQIQLIDLPEVEPPP-QELLKSPEFYILTFLESLIPHVKATIKTILSN--KVVGLV 117
Query: 109 YDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPGLPSL 168
D +DV +FGI +T++ S+ + + + + L +P +
Sbjct: 118 LDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEEVFDDSDRDHQLLNIPGI 177
Query: 169 ASSDLPSFLAQPASNPAY-LAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVM 227
++ + L N A + ++ N+F +LE+ + A+
Sbjct: 178 SNQVPSNVLPDACFNKDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDE--- 234
Query: 228 IGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVS-FGSMADIAANQ 286
+ P + + + + D ++WL +P+KSV+++ +Q
Sbjct: 235 --KIPPIYAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQ 292
Query: 287 VDEIARGLKASEKPFLWVVKENENKLPVEFVNSVGETG--LVVRWCNQFEVLAHQAVGCF 344
+ EIA GLK S FLW + P F+ + G ++ W Q EVLAH+A+G F
Sbjct: 293 IREIALGLKHSGVRFLWSNSAEKKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGF 352
Query: 345 ITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRA---GIVTGEE 401
++HCGWNSILE + GV ++ P +++Q NA + + W VG+ + + +V EE
Sbjct: 353 VSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEE 412
Query: 402 LNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFV 447
+ K + ++MD + + + V + +E ++ AV GGSS ++ + +
Sbjct: 413 IEKGLKDLMDKDS--IVHKKVQEMKEMSRNAVVDGGSSLISVGKLI 456
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} Length = 401 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Score = 150 bits (379), Expect = 1e-41
Identities = 54/436 (12%), Positives = 120/436 (27%), Gaps = 54/436 (12%)
Query: 10 VLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDEGGF 69
VL+ +G + + A RL + V+ + + + GV + G +
Sbjct: 3 VLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEV--GVPHVPVGLPQHMM 60
Query: 70 KQAPSVKAYLESFKTVGS---RTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIY 126
Q E + + + + + + + V + + T VA + G+
Sbjct: 61 LQEGMPPPPPEEEQRLAAMTVEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLGLP 120
Query: 127 GAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPGLPSLASSDLPSFLAQPASNPAY 186
+ + + S + + T PG+ +
Sbjct: 121 FFYSVPSPVYLASPHLPPAY-----------DEPTTPGVTDIRVLWEERAARFADRYGPT 169
Query: 187 LAAILEQFGSLNKNDWVLCN---SFEELEKELLRAMLGLWPLVMIGPLVPSAYLDQQIAG 243
L + G D +L + V G +
Sbjct: 170 LNRRRAEIGLPPVEDVFGYGHGERPLLAADPVLAPLQPDVDAVQTGAWLL---------- 219
Query: 244 DSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLW 303
++ + A P +++ FGS + ++A ++ +
Sbjct: 220 -----SDERPLPPELEAFLAAGSP---PVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVI 271
Query: 304 VVKENENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAV 363
+ + + + + + N + V I H + GV
Sbjct: 272 LSRGWTELVLPD----DRDDCFAIDEVNFQALFRR--VAAVIHHGSAGTEHVATRAGVPQ 325
Query: 364 VAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVS 423
+ +P+ +DQP A V +GV T E L+ + V+ E +
Sbjct: 326 LVIPRNTDQPYFAGRVAA-LGIGVAHDGPT---PTFESLSAALTTVLAPETRARA----- 376
Query: 424 KWREFAKKAVSAGGSS 439
A ++ G ++
Sbjct: 377 --EAVAGMVLTDGAAA 390
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} Length = 401 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Score = 148 bits (374), Expect = 6e-41
Identities = 65/430 (15%), Positives = 116/430 (26%), Gaps = 43/430 (10%)
Query: 10 VLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDEGGF 69
VL+ T ++G PL+ A R+ + + + V P+
Sbjct: 3 VLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEVGVPHVPVGPSARAPIQ 62
Query: 70 KQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAA 129
+ P + F T T + I + + V + VA + GI
Sbjct: 63 RAKPLTAEDVRRFTTEAIATQFDEIPAAAEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFY 122
Query: 130 MMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPGLPSLASSDLPSFLAQPASNPAYLAA 189
+ V S Y+ PL P ++ Y
Sbjct: 123 AFHCPSYVPSPYYPPP-------------PLGEPSTQDTIDIPAQWERNNQSAYQRYGGL 169
Query: 190 ILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAYLDQQIAGDSAYGA 249
+ ++ +F + + A L P + P A
Sbjct: 170 LNSHRDAIGLPPVEDIFTFGYTDHPWVAADPVLAP---LQPTDLDAVQT--------GAW 218
Query: 250 NIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENE 309
+ + +Y+ FGS+ A+ V ++A + + +
Sbjct: 219 ILPDERPLSPELAAFLDAGPPPVYLGFGSLGA-PADAVRVAIDAIRAHGRRVILSRGWAD 277
Query: 310 NKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQF 369
LP G + N + V I H G + G + +PQ
Sbjct: 278 LVLPD-----DGADCFAIGEVNHQVLFGR--VAAVIHHGGAGTTHVAARAGAPQILLPQM 330
Query: 370 SDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFA 429
+DQP A V E VGV T + L+ + + E + A
Sbjct: 331 ADQPYYAGRVAE-LGVGVAHDGPI---PTFDSLSAALATALTPETHARA-------TAVA 379
Query: 430 KKAVSAGGSS 439
+ G +
Sbjct: 380 GTIRTDGAAV 389
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} Length = 391 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Score = 120 bits (301), Expect = 9e-31
Identities = 58/422 (13%), Positives = 104/422 (24%), Gaps = 55/422 (13%)
Query: 10 VLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDEGGF 69
VL+ ++G PL+ A RL A + V+ V + P+ G
Sbjct: 3 VLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEVGVPMVPVGRAVRAGAR 62
Query: 70 KQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAA 129
+ E V + + + V +A + GI
Sbjct: 63 EPGELPPGAAEVVTEVV-AEWFDKVPAAIEGCDAVVTTGLLPAAVAVRSMAEKLGIPYRY 121
Query: 130 MMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPGLPSLASSDLPSFLAQPASNPAYLAA 189
+ + + S Q + ++ A + +
Sbjct: 122 TVLSPDHLPSEQSQAERDMYNQGADR------------------LFGDAVNSHRASIGLP 163
Query: 190 ILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAYLDQQIAGDSAYGA 249
+E D + L V G +
Sbjct: 164 PVEHLYDYGYTDQPWLAADPVLSPLRPTD----LGTVQTGAWILPD-------------- 205
Query: 250 NIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENE 309
E + V S A+ + ++AS + + +
Sbjct: 206 ---ERPLSAELEAFLAAGSTPVYVGFGSSSRPATADAAKMAIKAVRASGRRIVLSRGWAD 262
Query: 310 NKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQF 369
LP G VV N E+ V I H + L + G+ + V +
Sbjct: 263 LVLP-----DDGADCFVVGEVNLQELFGR--VAAAIHHDSAGTTLLAMRAGIPQIVVRRV 315
Query: 370 SD----QPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKW 425
D Q +A V E VGV T + L+ ++ + E +
Sbjct: 316 VDNVVEQAYHADRVAE-LGVGVAVDGPV---PTIDSLSAALDTALAPEIRARATTVADTI 371
Query: 426 RE 427
R
Sbjct: 372 RA 373
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 459 | |||
| d2c1xa1 | 450 | UDP glucose:flavonoid 3-o-glucosyltransferase {Gra | 100.0 | |
| d2pq6a1 | 473 | (Iso)flavonoid glycosyltransferase {Medicago trunc | 100.0 | |
| d2vcha1 | 471 | Hydroquinone glucosyltransferase {Thale cress (Ara | 100.0 | |
| d2acva1 | 461 | Triterpene UDP-glucosyl transferase UGT71G1 {Medic | 100.0 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 100.0 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 100.0 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 100.0 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 99.94 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.23 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 98.94 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 98.86 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 98.74 | |
| d1f6da_ | 376 | UDP-N-acetylglucosamine 2-epimerase {Escherichia c | 98.53 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 98.5 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 97.63 | |
| d1pswa_ | 348 | ADP-heptose LPS heptosyltransferase II {Escherichi | 97.44 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 97.07 | |
| d1j9ja_ | 247 | SurE homolog TM1662 {Thermotoga maritima [TaxId: 2 | 94.38 | |
| d1ccwa_ | 137 | Glutamate mutase, small subunit {Clostridium cochl | 93.28 | |
| d1gsoa2 | 105 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 88.17 | |
| d1l5xa_ | 276 | SurE homolog PAE2908 (SurE-alpha) {Archaeon Pyroba | 87.29 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 86.72 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 86.37 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 83.97 | |
| d1vkza2 | 90 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 83.72 | |
| d7reqa2 | 168 | Methylmalonyl-CoA mutase alpha subunit, C-terminal | 81.65 | |
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 81.02 |
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Probab=100.00 E-value=5.3e-55 Score=434.24 Aligned_cols=429 Identities=29% Similarity=0.476 Sum_probs=309.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccc---cc----cCC--CCceEEEcCCCCCCCCCCCCCCHHHH
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTV---KS----IHA--TTVGVEPISDGFDEGGFKQAPSVKAY 78 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~---~~----~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~ 78 (459)
.||+|+|+|+.||++|+++||++|++|||+|+|++..... .. +.. .++.+..++++++........ ....
T Consensus 2 ~hvl~~p~P~~gH~~p~l~la~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 80 (450)
T d2c1xa1 2 PHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDISDGVPEGYVFAGR-PQED 80 (450)
T ss_dssp CEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC-------CTTEEEEECCCCCCTTCCCCCC-TTHH
T ss_pred CEEEEECchhHhHHHHHHHHHHHHHHCCCcEEEEEccCccchhhhhcccccccCCCceeeecCCCCCcchhhccc-hHHH
Confidence 5899999999999999999999999999999999753221 11 111 367788888776654332222 2222
Q ss_pred HHHHHH-hchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhccC----CCCCC
Q 012645 79 LESFKT-VGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGL----LTLPV 153 (459)
Q Consensus 79 ~~~~~~-~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~----~~~p~ 153 (459)
+..+.. ......+.+.+.+.....++|+||+|.+..++..+|+++|+|++.+.+.+....+......... .+...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~~~~p~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (450)
T d2c1xa1 81 IELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVSGIQ 160 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHHCSSCCT
T ss_pred HHHHHHHHHHHhHHHHHHHHHhCCCCCeEEEECCccHHHHHHHHHhCCCEEEEecCchhhhhhhhcccccccccCCCccc
Confidence 222222 2222233333333333458999999999999999999999999999988876554433322111 11110
Q ss_pred C-CCCCcccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcC-CCeeeeccc
Q 012645 154 N-QETVPLTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGL-WPLVMIGPL 231 (459)
Q Consensus 154 ~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~vgp~ 231 (459)
. ........+......................+..............+....+++.++.......+... ++..++|+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~g~~ 240 (450)
T d2c1xa1 161 GREDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSKLKTYLNIGPF 240 (450)
T ss_dssp TCTTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHHHSSCEEECCCH
T ss_pred cccccccccCCcccchhHhhhhhhhhcccchHHHHHHHHHHHhhhhcccccccccHHhhhhhhhhhccccCCceeecCCc
Confidence 0 00000111111111111111111112333445555555666667778888888888877666665543 457777765
Q ss_pred CCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCC-C
Q 012645 232 VPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENE-N 310 (459)
Q Consensus 232 ~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~-~ 310 (459)
..... ....+.++++..|+...+.+++||+++||......+.+..++.+++.++.+++|+..... .
T Consensus 241 ~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~v~~s~gs~~~~~~~~~~~~~~~~~~~~~~vl~~~~~~~~~ 307 (450)
T d2c1xa1 241 NLITP-------------PPVVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDKARV 307 (450)
T ss_dssp HHHC----------------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGGGGG
T ss_pred cccCC-------------CCCCcchhhhccccccCCccceeeecccccccCCHHHHHHHHHHHHhcCCeEEEEECCCccc
Confidence 33210 011223556888999988889999999999999999999999999999999999987655 6
Q ss_pred CCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHH-hhhceEEe
Q 012645 311 KLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEE-VWEVGVRA 389 (459)
Q Consensus 311 ~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~-~~G~G~~~ 389 (459)
.+++++..+.+.|+.+.+|+||.++|.|++|++||||||+||++||+++|||||++|++.||+.||+|+++ + |+|+.+
T Consensus 308 ~l~~~~~~~~~~nv~~~~~~pq~~lL~hp~~~~fItHGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~-G~G~~l 386 (450)
T d2c1xa1 308 HLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVL-EIGVRI 386 (450)
T ss_dssp GSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTS-CCEEEC
T ss_pred cCChhhhhhccccccccccCChHhhhccCceeEEEccCCccHHHHHHHcCCCEEecccccchHHHHHHHHHHc-CcEEEe
Confidence 67777777889999999999999999999999999999999999999999999999999999999999976 7 999999
Q ss_pred eecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhc
Q 012645 390 KKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLLKAD 454 (459)
Q Consensus 390 ~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~~~~ 454 (459)
+.. .+|++.|.++|+++|+|+.++++++|+++|++.+.+++.+||||.+++..++|++.+++
T Consensus 387 ~~~---~~t~~~l~~ai~~vL~d~~y~~~~~r~~~l~~~~~~a~~~~gss~~~~~~~~e~v~r~~ 448 (450)
T d2c1xa1 387 EGG---VFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSKPK 448 (450)
T ss_dssp GGG---SCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHTSCC
T ss_pred cCC---CcCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhhhc
Confidence 998 89999999999999999855556689999999998999999999999999999998764
|
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Probab=100.00 E-value=7.4e-55 Score=435.14 Aligned_cols=439 Identities=30% Similarity=0.550 Sum_probs=318.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCC----------CceEEEcCCCCCCCCC--CCCCC
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHAT----------TVGVEPISDGFDEGGF--KQAPS 74 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~----------g~~~~~~~~~~~~~~~--~~~~~ 74 (459)
|.||+++|+|+.||++|+++||++|++|||+|||++++.+...+.+. .+.+..+++....... .....
T Consensus 1 ~~hvl~~p~p~~gH~~P~~~lA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (473)
T d2pq6a1 1 KPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPMEGDGDVSQD 80 (473)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECCCCC---------CC
T ss_pred CCEEEEECchhhhHHHHHHHHHHHHHHCCCeEEEEeCcchHhHHhhccCcccccCCCCcceeecCCCCcccccccchhhh
Confidence 56899999999999999999999999999999999998777665552 4566666655443221 22344
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhhc--CCCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhcc--CCC
Q 012645 75 VKAYLESFKTVGSRTLAEVILKYKD--SESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHG--LLT 150 (459)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~--~~~ 150 (459)
....+..+.....+.+......+.. ....+|+||.|....++..+|+++|+|++.+.+..........+.... ...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~a~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (473)
T d2pq6a1 81 VPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERGI 160 (473)
T ss_dssp HHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeEEEecCcchhhHHHHHHhCCCceeeccccchhhhhhhcccccccccC
Confidence 4555555555444444444444332 224789999999999999999999999999988776544443322211 000
Q ss_pred CCCCC------C---CCcccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhc
Q 012645 151 LPVNQ------E---TVPLTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLG 221 (459)
Q Consensus 151 ~p~~~------~---~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 221 (459)
.+... . .....+|+++....+++..+.............+......++.....+.+++.+.+......+..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (473)
T d2pq6a1 161 IPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVINALSS 240 (473)
T ss_dssp SSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHHHHHHHHT
T ss_pred CCccccccccccccccccccCCCccccchhhhhhhhhhcchhHHHHHHHHHHHHHHHhhhcccccchhhhhHhHHHHHHh
Confidence 00000 0 01112344333344444444444555566677777777788888999999999988877766665
Q ss_pred CC-CeeeecccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCc
Q 012645 222 LW-PLVMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKP 300 (459)
Q Consensus 222 ~~-~~~~vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~ 300 (459)
.. ...+.++..+..............+....+ .+.+...|+...+...++|+++||......+....++.+++.++.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~gs~~~~~~~~~~~~~~~~~~~~~~ 319 (473)
T d2pq6a1 241 TIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWK-EDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGLANCKKS 319 (473)
T ss_dssp TCTTEEECCCHHHHHHTSTTGGGGCC----------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHHHHHTTCE
T ss_pred cCCcccccCCccccCCCCCCccccccCCccccc-ccHHHHHHhhhcCCCceeeeccCccccccHHHHHHHHHHHHhcCCe
Confidence 43 355555433221111111100111111122 2445667777777888999999999999999999999999999999
Q ss_pred EEEEEeCCC-----CCCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhH
Q 012645 301 FLWVVKENE-----NKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTN 375 (459)
Q Consensus 301 ~v~~~~~~~-----~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~n 375 (459)
++|++.... ..+++++....++|+++.+|+||.++|.||+|++||||||+||++||+++|||||++|++.||++|
T Consensus 320 ~i~~~~~~~~~~~~~~~~~~~~~~~~~Nv~~~~~~Pq~~lL~hp~~~~fItHGG~~s~~Eal~~GVP~lv~P~~~DQ~~n 399 (473)
T d2pq6a1 320 FLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTD 399 (473)
T ss_dssp EEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHH
T ss_pred EEEEEccCCcccccccCcccchhhccCceEEeeeCCHHHHhcCCcCcEEEecCCccHHHHHHHcCCCEEeccchhhhHHH
Confidence 999987653 346666766788999999999999999999999999999999999999999999999999999999
Q ss_pred HHHH-HHhhhceEEeeecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012645 376 AKFV-EEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLL 451 (459)
Q Consensus 376 a~rv-~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~ 451 (459)
|+|| +++ |+|+.++. .+|+++|.++|+++|+|+.+++||+||++|++++++++.+||+|.+++++||++++
T Consensus 400 a~rv~~~~-G~G~~l~~----~~t~~~l~~ai~~vl~d~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~i~~~~ 471 (473)
T d2pq6a1 400 CRFICNEW-EIGMEIDT----NVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDVL 471 (473)
T ss_dssp HHHHHHTS-CCEEECCS----SCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHc-CeEEeeCC----CcCHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Confidence 9999 456 99999984 69999999999999999866679999999999999999999999999999999875
|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=1.2e-51 Score=411.76 Aligned_cols=431 Identities=26% Similarity=0.436 Sum_probs=311.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHh-CCCeEEEEecCccccccCC--------CCceEEEcCCCCCCCCCCCCCCHHHH
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLAS-KRVKATLATTHYTVKSIHA--------TTVGVEPISDGFDEGGFKQAPSVKAY 78 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~-~Gh~V~~~~~~~~~~~~~~--------~g~~~~~~~~~~~~~~~~~~~~~~~~ 78 (459)
.||+|+|+|+.||++|+++||++|++ |||+|||++++.+...... .++....++... ........+....
T Consensus 2 ~hil~~p~p~~GH~~P~l~La~~L~~~rGH~Vt~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 80 (471)
T d2vcha1 2 PHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVFLPPVD-LTDLSSSTRIESR 80 (471)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC-CCTTEEEEECCCCC-CTTSCTTCCHHHH
T ss_pred CEEEEECchhHhHHHHHHHHHHHHHHccCCEEEEEeCCCcchhhhhhcccccCCCCcceeecCccc-ccccccccchHHH
Confidence 48999999999999999999999964 8999999998765443322 234455554322 2222334556666
Q ss_pred HHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCC--CCCCCCC
Q 012645 79 LESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLL--TLPVNQE 156 (459)
Q Consensus 79 ~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~--~~p~~~~ 156 (459)
+..+.......++...+.+......+|+||.|....++..+++++|+|++.+.+.+........+.+.... +......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~a~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (471)
T d2vcha1 81 ISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCEFREL 160 (471)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHCCSCGGGC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeccchHHHHHHHHhCCCcccccccchhhHHHhhcCcccccccCcccccc
Confidence 66666777777777777777666789999999999999999999999999998877655444433331111 1111110
Q ss_pred CCcccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcC----CCeeeecccC
Q 012645 157 TVPLTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGL----WPLVMIGPLV 232 (459)
Q Consensus 157 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~----~~~~~vgp~~ 232 (459)
.....+|+............. .....................+..+.+.+...+.......... +++.+.++..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (471)
T d2vcha1 161 TEPLMLPGCVPVAGKDFLDPA--QDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDKPPVYPVGPLV 238 (471)
T ss_dssp SSCBCCTTCCCBCGGGSCGGG--SCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCCTTCCCEEECCCCC
T ss_pred ccccccccccccccccccccc--cccchHHHHHHHHHHHhhcccccccchhHHHHHHHHHhhcccccCCCCCccCccccc
Confidence 112223332222211111111 2222334455555555566677777777777666555444432 2345555443
Q ss_pred CCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCC---
Q 012645 233 PSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENE--- 309 (459)
Q Consensus 233 ~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~--- 309 (459)
... +.....+..+++..|++.....+.+|+++|+........+..+..+++..+.+++|......
T Consensus 239 ~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (471)
T d2vcha1 239 NIG------------KQEAKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGIA 306 (471)
T ss_dssp CCS------------CSCC-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCSST
T ss_pred ccC------------ccccccccchhHHHHHHhcCCccccccccccccCCCHHHHHHHHHHHHhhcCCeEEEeccccccc
Confidence 321 01112334567889999988889999999999988888899999999999999999987642
Q ss_pred --------------CCCchhhhh-hcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhh
Q 012645 310 --------------NKLPVEFVN-SVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPT 374 (459)
Q Consensus 310 --------------~~~~~~~~~-~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~ 374 (459)
..+|+++.. ..++||++.+|+||.+||+||+|++||||||+||++||+++|||||++|++.||++
T Consensus 307 ~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~w~Pq~~lL~hp~~~~fVtHGG~gS~~EAl~~GvP~v~~P~~~DQ~~ 386 (471)
T d2vcha1 307 NSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKM 386 (471)
T ss_dssp TTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHH
T ss_pred cccccccccccchhhhCCchhhhhccCCCeeecccCCHHHHhcCccCCEEEecCCccHHHHHHHcCCCEEEcccccccHH
Confidence 224555443 24688999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH-HhhhceEEeeecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Q 012645 375 NAKFVE-EVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLLKA 453 (459)
Q Consensus 375 na~rv~-~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~~~ 453 (459)
||+|++ ++ |+|+.+...+.+.+|+++|.++|+++|+|+++++||+||+++++++++|.+|||+|.++++.+++.++..
T Consensus 387 nA~rv~e~l-G~Gv~l~~~~~~~~t~~~l~~ai~~vl~~~~~~~~r~ra~~l~e~~~~a~~~gG~s~~~~~~~~~~~~~~ 465 (471)
T d2vcha1 387 NAVLLSEDI-RAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWKAH 465 (471)
T ss_dssp HHHHHHHTT-CCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHh-eeEEEEecCCCCcCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHh
Confidence 999995 46 9999997763335899999999999999986667999999999999999999999999999999999865
Q ss_pred c
Q 012645 454 D 454 (459)
Q Consensus 454 ~ 454 (459)
+
T Consensus 466 ~ 466 (471)
T d2vcha1 466 K 466 (471)
T ss_dssp H
T ss_pred h
Confidence 4
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Probab=100.00 E-value=1.8e-52 Score=416.59 Aligned_cols=430 Identities=24% Similarity=0.425 Sum_probs=312.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEE--EecCcc-ccccC---------CCCceEEEcCCCCCCCCCCCCCCH
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATL--ATTHYT-VKSIH---------ATTVGVEPISDGFDEGGFKQAPSV 75 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~--~~~~~~-~~~~~---------~~g~~~~~~~~~~~~~~~~~~~~~ 75 (459)
.||||+|+|+.||++|++.||++|++|||+|++ ++++.. ...++ .+++.++.+++...... ......
T Consensus 8 ~hil~~p~P~~GH~~P~l~lA~~L~~rGH~V~vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 86 (461)
T d2acva1 8 SELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEVEPPPQ-ELLKSP 86 (461)
T ss_dssp EEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCCCCCCG-GGGGSH
T ss_pred CeEEEecChhhhHHHHHHHHHHHHHHCCCCeEEEEEeCCccchhhhhhcccccccCCCCeeEEECCCCCCchh-hhhhcH
Confidence 499999999999999999999999999999764 444433 22222 14688888886644322 233455
Q ss_pred HHHHHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCC
Q 012645 76 KAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQ 155 (459)
Q Consensus 76 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~ 155 (459)
......+.+.....++++++.+... ++|+||.|.+..++..+|+.+|+|++.+++.++.......+.+......+...
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~vi~d~~~~~~~~~a~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (461)
T d2acva1 87 EFYILTFLESLIPHVKATIKTILSN--KVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEEVFDD 164 (461)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHCCT--TEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTTCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccC--CCeEEEEeccchHHHHHHHHhCCCeEEEecccchhhHHhhccccccccccccc
Confidence 5566666677777888888888655 89999999999999999999999999999988766666555543333222221
Q ss_pred CCCcccCCCCCCCCCCCCCccccC-CCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhc----CCCeeeecc
Q 012645 156 ETVPLTLPGLPSLASSDLPSFLAQ-PASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLG----LWPLVMIGP 230 (459)
Q Consensus 156 ~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~vgp 230 (459)
.......+.++............. ..........+.+........++.+.+++..++......+.+ .++++++||
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 244 (461)
T d2acva1 165 SDRDHQLLNIPGISNQVPSNVLPDACFNKDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDEKIPPIYAVGP 244 (461)
T ss_dssp SSGGGCEECCTTCSSCEEGGGSCHHHHCTTTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHCTTSCCEEECCC
T ss_pred cccccccccccccccchhhhhhhhhhhccchhHHHHHHHHHhhhccccccccccccccchhhhhhhhcccCCCCceeecc
Confidence 111111111111100000000000 011112233444555556677888888888877655444433 246888888
Q ss_pred cCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCccc-CCHHHHHHHHHHHHhCCCcEEEEEeCCC
Q 012645 231 LVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMAD-IAANQVDEIARGLKASEKPFLWVVKENE 309 (459)
Q Consensus 231 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~-~~~~~~~~i~~a~~~~~~~~v~~~~~~~ 309 (459)
.......... ...++.++++..|++..+...++++++|+... ...+.+..++.+++..+++++|+.....
T Consensus 245 ~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (461)
T d2acva1 245 LLDLKGQPNP---------KLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAEK 315 (461)
T ss_dssp CCCSSCCCBT---------TBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCCG
T ss_pred ccccCCccCC---------CccccCcHHHHHHHhhCCccceeeeeccccccCCCHHHHHHHHHHHHhcCccEEEEeeccc
Confidence 8766321111 11223456678899988788889999988764 6778899999999999999999987654
Q ss_pred CCCchhhhh--hcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHH-HHhhhce
Q 012645 310 NKLPVEFVN--SVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFV-EEVWEVG 386 (459)
Q Consensus 310 ~~~~~~~~~--~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv-~~~~G~G 386 (459)
...++++.+ ..++|+.++.|.||.++|.|++|++||||||+||++||+++|||||++|++.||++||+|+ +++ |+|
T Consensus 316 ~~~~~~~~~~~~~~~n~~v~~~~pq~~~l~~p~~~~fItHGG~gs~~eAl~~GVP~l~~P~~~DQ~~nA~rlve~~-G~G 394 (461)
T d2acva1 316 KVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEW-GVG 394 (461)
T ss_dssp GGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTS-CCE
T ss_pred ccCCccchhhhccCCCeEEEecCCHHHHHhcccCCEEEecCCccHHHHHHHcCCCEEeCCcccchHHHHHHHHHHh-Cce
Confidence 333444432 3679999999999999999999999999999999999999999999999999999999997 567 999
Q ss_pred EEeeecC---CCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Q 012645 387 VRAKKNR---AGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLLK 452 (459)
Q Consensus 387 ~~~~~~~---~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~~ 452 (459)
..++... ...+|+++|+++|+++|+++ +.||+||++|+++++++++|||||..++++||+++.+
T Consensus 395 ~~l~~~~~~~~~~~t~~~l~~a~~~vl~~d--~~~r~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~~~~ 461 (461)
T d2acva1 395 LGLRVDYRKGSDVVAAEEIEKGLKDLMDKD--SIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDITG 461 (461)
T ss_dssp EESCSSCCTTCCCCCHHHHHHHHHHHTCTT--CTHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHHC
T ss_pred EEeeccccccCCccCHHHHHHHHHHHhhCC--HHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHhcC
Confidence 9988652 11389999999999999753 0699999999999999999999999999999999864
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=100.00 E-value=1.6e-44 Score=352.40 Aligned_cols=360 Identities=16% Similarity=0.120 Sum_probs=238.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcCCCCCCC--CCCCCCCHHHHHHHHHHh
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDEG--GFKQAPSVKAYLESFKTV 85 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 85 (459)
|||+|+++|+.||++|+++||++|+++||+|+|++++.+.+.+++.|++|++++...... ..................
T Consensus 1 mrIl~~~~gt~Ghv~P~l~lA~~L~~rGh~V~~~t~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (401)
T d1rrva_ 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEVGVPHVPVGLPQHMMLQEGMPPPPPEEEQRLAAMT 80 (401)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHTCCEEECSCCGGGCCCTTSCCCCHHHHHHHHHHH
T ss_pred CeEEEECCCChhHHHHHHHHHHHHHHCCCEEEEEEChhhHHHHHHCCCeEEEcCCcHHhhhccccccccHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999998999999986321111 111122333333322222
Q ss_pred chHHHHHHHHHhhcCCCCccEEEeCCCc-hhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCcccCCC
Q 012645 86 GSRTLAEVILKYKDSESPVNCIVYDSLL-TWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPG 164 (459)
Q Consensus 86 ~~~~~~~l~~~~~~~~~~~Dlvi~D~~~-~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~p~ 164 (459)
....++.+.+.+.. .++|+++.|... .++..+|+.+|+|++...+.+.... .+.
T Consensus 81 ~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~a~~~~~p~~~~~~~~~~~~-----------------------~~~ 135 (401)
T d1rrva_ 81 VEMQFDAVPGAAEG--CAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLA-----------------------SPH 135 (401)
T ss_dssp HHHHHHHHHHHTTT--CSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSC-----------------------CSS
T ss_pred HHHHHHHHHHHHhc--CCCeEEEEcCchhhHHHHHHHHhCCCcccccccchhhc-----------------------ccc
Confidence 22223333232322 388999988655 4577889999999998877652110 000
Q ss_pred CC-CCCCCCCCccccCCCCChH--------HHHHHHHHhhcccC-----------CceEEEcchhHhhHHHHHHHhcCCC
Q 012645 165 LP-SLASSDLPSFLAQPASNPA--------YLAAILEQFGSLNK-----------NDWVLCNSFEELEKELLRAMLGLWP 224 (459)
Q Consensus 165 ~~-~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~-----------~~~~~~~~~~~l~~~~~~~~~~~~~ 224 (459)
.+ ................... ......+....+.. .........+.+. ..+...+
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 210 (401)
T d1rrva_ 136 LPPAYDEPTTPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGERPLLAADPVLA-----PLQPDVD 210 (401)
T ss_dssp SCCCBCSCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCSSCEECSCTTTS-----CCCSSCC
T ss_pred cccccccccccccchhhhhHHHHHHHHHhhhHHHHHHHHHHhCCcccchhhhhccccchhhcchhhhc-----ccCCCCC
Confidence 00 0000000000000000000 00011111111000 0000111111100 0111123
Q ss_pred eeeecccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCC-HHHHHHHHHHHHhCCCcEEE
Q 012645 225 LVMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIA-ANQVDEIARGLKASEKPFLW 303 (459)
Q Consensus 225 ~~~vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~-~~~~~~i~~a~~~~~~~~v~ 303 (459)
..++|++.... ..+.++++..|++... ++||+++||..... ......+++++...+..++|
T Consensus 211 ~~~~g~~~~~~----------------~~~~~~~~~~~l~~~~--~~v~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (401)
T d1rrva_ 211 AVQTGAWLLSD----------------ERPLPPELEAFLAAGS--PPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVIL 272 (401)
T ss_dssp CEECCCCCCCC----------------CCCCCHHHHHHHHSSS--CCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred eEEECCCcccc----------------cccCCHHHHHhhccCC--CeEEEECCccccCCHHHHHHHHHHHHhhcCCeEEE
Confidence 55555544331 2345777899998764 49999999987643 45677788899999999888
Q ss_pred EEeCCCCCCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhh
Q 012645 304 VVKENENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVW 383 (459)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~ 383 (459)
.....+.... ..++|+++.+|+||.++|+|+++ ||||||+||++||+++|||+|++|+..||+.||++++++
T Consensus 273 ~~~~~~~~~~-----~~~~~v~~~~~~p~~~ll~~~~~--~I~hgG~~t~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~- 344 (401)
T d1rrva_ 273 SRGWTELVLP-----DDRDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAAL- 344 (401)
T ss_dssp ECTTTTCCCS-----CCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHH-
T ss_pred eccccccccc-----cCCCCEEEEeccCcHHHhhhccE--EEecCCchHHHHHHHhCCCEEEecccccHHHHHHHHHHC-
Confidence 7654321111 35789999999999999977666 999999999999999999999999999999999999999
Q ss_pred hceEEeeecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHH
Q 012645 384 EVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAK 430 (459)
Q Consensus 384 G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~ 430 (459)
|+|+.++.. ++|++.|.++|+++|+ + +|+++|+++++.++
T Consensus 345 G~g~~l~~~---~~~~~~L~~ai~~vl~-~---~~r~~a~~~~~~~~ 384 (401)
T d1rrva_ 345 GIGVAHDGP---TPTFESLSAALTTVLA-P---ETRARAEAVAGMVL 384 (401)
T ss_dssp TSEEECSSS---CCCHHHHHHHHHHHTS-H---HHHHHHHHHTTTCC
T ss_pred CCEEEcCcC---CCCHHHHHHHHHHHhC-H---HHHHHHHHHHHHHh
Confidence 999999987 8999999999999995 5 89999999998875
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=100.00 E-value=1.5e-44 Score=351.55 Aligned_cols=371 Identities=18% Similarity=0.184 Sum_probs=243.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcCCCCCCCCCCCCCCHHHHHHHHHHhch
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDEGGFKQAPSVKAYLESFKTVGS 87 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (459)
|||||+++||.||++|+++||++|+++||+|+|++++.+.+.+++.|+++++++..................+.......
T Consensus 1 mril~~~~gt~Ghi~P~laLA~~L~~rGh~V~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (391)
T d1pn3a_ 1 MRVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEVGVPMVPVGRAVRAGAREPGELPPGAAEVVTEVVA 80 (391)
T ss_dssp CEEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHTCCEEECSSCSSGGGSCTTCCCTTCGGGHHHHHH
T ss_pred CEEEEEcCCChhHHHHHHHHHHHHHHCCCEEEEEEChhhHhHHHHCCCeEEECCccHHHHhhChhhhhHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999855432211111111111111112222
Q ss_pred HHHHHHHHHhhcCCCCccEEEeCCCch---hHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCcccCCC
Q 012645 88 RTLAEVILKYKDSESPVNCIVYDSLLT---WALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPG 164 (459)
Q Consensus 88 ~~~~~l~~~~~~~~~~~Dlvi~D~~~~---~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~p~ 164 (459)
..++.+.+.+ .+||+||+|.+.. ++..+|+++++|++.+...+... |.
T Consensus 81 ~~~~~l~~~~----~~~D~vi~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~-------------------------~~ 131 (391)
T d1pn3a_ 81 EWFDKVPAAI----EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHL-------------------------PS 131 (391)
T ss_dssp HHHHHHHHHH----TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGS-------------------------GG
T ss_pred HHHHHHHHHh----cCCCeEEEcccCchHHHHHHHHHHcCCceEEeecccccc-------------------------cc
Confidence 3333333333 2699999997754 35668899999999987765211 00
Q ss_pred CCCCCCCCCCccccCCCCChHHHHHHHHHhhcccC-----------CceEEEcchhHhhHHHHHHHhcCCCeeeecccCC
Q 012645 165 LPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNK-----------NDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVP 233 (459)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~l~~~~~~~~~~~~~~~~vgp~~~ 233 (459)
. ................+...+.+....... .....+...+.+.. ..+...+.+++|+...
T Consensus 132 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~~~~~~g~~~~ 203 (391)
T d1pn3a_ 132 E----QSQAERDMYNQGADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSP----LRPTDLGTVQTGAWIL 203 (391)
T ss_dssp G----SCHHHHHHHHHHHHHHTHHHHHHHHHTTSCCCCCCHHHHHHCSSCEECSCTTTSC----CCTTCCSCCBCCCCCC
T ss_pred c----cccchhhHHHHHHHHHHHHHHHHHHHHhcCcccccccccccccceeeccchhhhc----cCCCCCCeeeecCccc
Confidence 0 000000000000000000011111111000 00011111111110 0000112344444332
Q ss_pred CccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCC-HHHHHHHHHHHHhCCCcEEEEEeCCCCCC
Q 012645 234 SAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIA-ANQVDEIARGLKASEKPFLWVVKENENKL 312 (459)
Q Consensus 234 ~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~-~~~~~~i~~a~~~~~~~~v~~~~~~~~~~ 312 (459)
. ...+.++++..|+..++ ++||+++|+..... ......++.++...+.+++|.........
T Consensus 204 ~----------------~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 265 (391)
T d1pn3a_ 204 P----------------DERPLSAELEAFLAAGS--TPVYVGFGSSSRPATADAAKMAIKAVRASGRRIVLSRGWADLVL 265 (391)
T ss_dssp C----------------CCCCCCHHHHHHTTSSS--CCEEEECTTCCSTHHHHHHHHHHHHHHHTTCCEEEECTTTTCCC
T ss_pred C----------------ccccCCHHHhhhhccCC--CeEEEeccccccccHHHHHHHHHHHHHhcCCEEEEecccccccc
Confidence 2 12334667788877654 48999999987654 45566688899999999988765432111
Q ss_pred chhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccc----hhhHHHHHHHhhhceEE
Q 012645 313 PVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSD----QPTNAKFVEEVWEVGVR 388 (459)
Q Consensus 313 ~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~D----Q~~na~rv~~~~G~G~~ 388 (459)
. ..++|+++.+|+||.++|+|+++ ||||||+||++||+++|||+|++|+..| |+.||+++++. |+|..
T Consensus 266 ~-----~~~~~v~i~~~~p~~~ll~~a~~--~v~hgG~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA~~l~~~-G~g~~ 337 (391)
T d1pn3a_ 266 P-----DDGADCFVVGEVNLQELFGRVAA--AIHHDSAGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAEL-GVGVA 337 (391)
T ss_dssp S-----SCCTTCCEESSCCHHHHHTTSSC--EEEESCHHHHHHHHHHTCCEEEECSSCCBTTBCCHHHHHHHHH-TSEEE
T ss_pred c-----cCCCCEEEecccCHHHHHhhccE--EEecCchHHHHHHHHhCCcEEEeccccCCcchHHHHHHHHHHC-CCEEE
Confidence 1 24689999999999999988777 9999999999999999999999999888 99999999999 99999
Q ss_pred eeecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Q 012645 389 AKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLLKA 453 (459)
Q Consensus 389 ~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~~~ 453 (459)
++.. .+|+++|.++|+++|++ +|++||+++++.+++ ++..++++.|.+.|..+
T Consensus 338 l~~~---~~~~~~l~~~i~~~l~~----~~r~~a~~~a~~~~~-----~g~~~aa~~i~~~l~~~ 390 (391)
T d1pn3a_ 338 VDGP---VPTIDSLSAALDTALAP----EIRARATTVADTIRA-----DGTTVAAQLLFDAVSLE 390 (391)
T ss_dssp ECCS---SCCHHHHHHHHHHHTST----THHHHHHHHGGGSCS-----CHHHHHHHHHHHHHHHH
T ss_pred cCcC---CCCHHHHHHHHHHHhCH----HHHHHHHHHHHHHHh-----cCHHHHHHHHHHHHHhc
Confidence 9987 89999999999999964 899999999987753 44456666555555543
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=100.00 E-value=9.3e-43 Score=339.38 Aligned_cols=377 Identities=16% Similarity=0.143 Sum_probs=239.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcCCCCCCCCCCC-CCCHHHHHHHHHHhc
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDEGGFKQ-APSVKAYLESFKTVG 86 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 86 (459)
|||||+++|+.||++|+++||++|+++||+|+|++++.+.+.+++.|++|++++.......... ...............
T Consensus 1 mkil~~~~gt~Gh~~P~lala~~L~~~Gh~V~~~~~~~~~~~v~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (401)
T d1iira_ 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEVGVPHVPVGPSARAPIQRAKPLTAEDVRRFTTEAI 80 (401)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCCEEECCC-------CCSCCCHHHHHHHHHHHH
T ss_pred CEEEEECCCChhHHHHHHHHHHHHHHCCCEEEEEeCcchHHHHHHcCCeEEECCcchhhhhhccccchHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999985433322111 223333333333333
Q ss_pred hHHHHHHHHHhhcCCCCccEEEeCCCc---hhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCcccCC
Q 012645 87 SRTLAEVILKYKDSESPVNCIVYDSLL---TWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLP 163 (459)
Q Consensus 87 ~~~~~~l~~~~~~~~~~~Dlvi~D~~~---~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~p 163 (459)
...++.+.+.. ...|.++.+.+. .++..+++.+++|.+.+.+.+.... .. ..|
T Consensus 81 ~~~~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~--------------~~------~~~ 136 (401)
T d1iira_ 81 ATQFDEIPAAA----EGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVP--------------SP------YYP 136 (401)
T ss_dssp HHHHHHHHHHT----TTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSC--------------CS------SSC
T ss_pred HHHHHHHHHHh----hcCcceEEeecchhHHHHHHHHHHhccccccccccccccc--------------cc------ccc
Confidence 33343333333 245666666554 3456788999999999877552110 00 011
Q ss_pred CCCCCCCCCCCccccCCCCChH----HHHHHHHHhhccc---------------CCceEEEcchhHhhHHHHHHHhcCCC
Q 012645 164 GLPSLASSDLPSFLAQPASNPA----YLAAILEQFGSLN---------------KNDWVLCNSFEELEKELLRAMLGLWP 224 (459)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~---------------~~~~~~~~~~~~l~~~~~~~~~~~~~ 224 (459)
.. ................+.. ....+......+. ..+..++++.+.+++. .+..+.
T Consensus 137 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 211 (401)
T d1iira_ 137 PP-PLGEPSTQDTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTDHPWVAADPVLAPL----QPTDLD 211 (401)
T ss_dssp CC-C---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCC----CCCSSC
T ss_pred cc-ccccccccchhcchhhhhhhhhHHHHHHHHHHHHHHHHhcCccchhhhhhcccchhhhcccccccCC----CCcccc
Confidence 10 0111010000000000000 0000000000000 0111122222222110 000011
Q ss_pred eeeecccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEE
Q 012645 225 LVMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWV 304 (459)
Q Consensus 225 ~~~vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~ 304 (459)
...+|++.. ....+.+.+...|+.... ++||+++|+... ....+..++++++..+..++|+
T Consensus 212 ~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~-~~~~~~~~~~al~~~~~~~~~~ 272 (401)
T d1iira_ 212 AVQTGAWIL----------------PDERPLSPELAAFLDAGP--PPVYLGFGSLGA-PADAVRVAIDAIRAHGRRVILS 272 (401)
T ss_dssp CEECCCCCC----------------CCCCCCCHHHHHHHHTSS--CCEEEECC---C-CHHHHHHHHHHHHHTTCCEEEC
T ss_pred cccccCccc----------------CcccccCHHHHHhhccCC--CeEEEccCcccc-chHHHHHHHHHHHHcCCeEEEe
Confidence 222222211 112334556677877654 489999999754 6678889999999999999998
Q ss_pred EeCCCCCCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhh
Q 012645 305 VKENENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWE 384 (459)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G 384 (459)
........ . ..++|+++.+|+||.++|.|+++ ||||||+||++||+++|||||++|+..||+.||+++++. |
T Consensus 273 ~~~~~~~~-~----~~~~nv~~~~~~p~~~~l~~~~~--~V~hgG~~t~~Eal~~GvP~v~~P~~~DQ~~na~~l~~~-G 344 (401)
T d1iira_ 273 RGWADLVL-P----DDGADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAEL-G 344 (401)
T ss_dssp TTCTTCCC-S----SCGGGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHH-T
T ss_pred ccCCcccc-c----cCCCCEEEEeccCHHHHHhhcCE--EEecCCchHHHHHHHhCCCEEEccccccHHHHHHHHHHC-C
Confidence 76542111 1 24678999999999999988666 999999999999999999999999999999999999999 9
Q ss_pred ceEEeeecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Q 012645 385 VGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLLK 452 (459)
Q Consensus 385 ~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~~ 452 (459)
+|..++.. ++|++.|.++|+++|+ + +|++||+++++.+++ .+..++++.|++.+.+
T Consensus 345 ~g~~l~~~---~~~~~~l~~ai~~~l~-~---~~~~~a~~~~~~~~~-----~~~~~aa~~i~~~i~r 400 (401)
T d1iira_ 345 VGVAHDGP---IPTFDSLSAALATALT-P---ETHARATAVAGTIRT-----DGAAVAARLLLDAVSR 400 (401)
T ss_dssp SEEECSSS---SCCHHHHHHHHHHHTS-H---HHHHHHHHHHHHSCS-----CHHHHHHHHHHHHHHT
T ss_pred CEEEcCcC---CCCHHHHHHHHHHHhC-H---HHHHHHHHHHHHHHh-----cChHHHHHHHHHHHhc
Confidence 99999988 8999999999999995 4 899999999999874 2334566666666653
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=99.94 E-value=4.6e-26 Score=217.00 Aligned_cols=336 Identities=13% Similarity=0.084 Sum_probs=194.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCcc--ccccCCCCceEEEcCCCCCCCCCCCCCCHHHHHHHHHHh
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYT--VKSIHATTVGVEPISDGFDEGGFKQAPSVKAYLESFKTV 85 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (459)
.||++.+.|+.||++|+++||++|.++||+|+|+++... .+.+...|+.+..++..--. ..............
T Consensus 1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 75 (351)
T d1f0ka_ 1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHGIEIDFIRISGLR-----GKGIKALIAAPLRI 75 (351)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGGTCEEEECCCCCCT-----TCCHHHHHTCHHHH
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeCCcchhhcccccCCcEEEEECCCcC-----CCCHHHHHHHHHHH
Confidence 489999987669999999999999999999999987653 35566778887777632111 11222221111111
Q ss_pred --chHHHHHHHHHhhcCCCCccEEEeC--CCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCccc
Q 012645 86 --GSRTLAEVILKYKDSESPVNCIVYD--SLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLT 161 (459)
Q Consensus 86 --~~~~~~~l~~~~~~~~~~~Dlvi~D--~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 161 (459)
.......++++. ++|.++.. .....+...+..+++|++.+....
T Consensus 76 ~~~~~~~~~i~~~~-----~~~~~~~~~~~~~~~~~~~a~~~~ip~~~~~~~~--------------------------- 123 (351)
T d1f0ka_ 76 FNAWRQARAIMKAY-----KPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNG--------------------------- 123 (351)
T ss_dssp HHHHHHHHHHHHHH-----CCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSS---------------------------
T ss_pred HHhHHHHHHHhhcc-----ccceeeecccchhhhhhhhhhhcccceeeccccc---------------------------
Confidence 112233344444 78888764 344567778999999999875432
Q ss_pred CCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcCCCeeeecccCCCccccccc
Q 012645 162 LPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAYLDQQI 241 (459)
Q Consensus 162 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vgp~~~~~~~~~~~ 241 (459)
.++ ...+... ...+........ .......+|+.......
T Consensus 124 ~~~------------------------~~~~~~~--~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~---- 162 (351)
T d1f0ka_ 124 IAG------------------------LTNKWLA--KIATKVMQAFPG-----------AFPNAEVVGNPVRTDVL---- 162 (351)
T ss_dssp SCC------------------------HHHHHHT--TTCSEEEESSTT-----------SSSSCEECCCCCCHHHH----
T ss_pred ccc------------------------hhHHHhh--hhcceeeccccc-----------cccceeEEcCCcccccc----
Confidence 110 0000000 111111111100 00112333322111000
Q ss_pred cCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCc-EEEEEeCCCCCC--chhhhh
Q 012645 242 AGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKP-FLWVVKENENKL--PVEFVN 318 (459)
Q Consensus 242 ~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~-~v~~~~~~~~~~--~~~~~~ 318 (459)
. .+...... .....+..+++.+||... ....+.+.+.+...... ..+......... ......
T Consensus 163 -----------~-~~~~~~~~-~~~~~~~~i~~~~gs~g~--~~~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~ 227 (351)
T d1f0ka_ 163 -----------A-LPLPQQRL-AGREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKGSQQSVEQAYAE 227 (351)
T ss_dssp -----------T-SCCHHHHH-TTCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHH
T ss_pred -----------c-chhHHhhh-hcccCCcccccccccchh--hhhHHHHHHhhhhhcccceeeeeccccchhhhhhhhcc
Confidence 0 01111111 122344578888888753 22233344444443333 233332221110 011112
Q ss_pred hcCCCceEEeeecHH-HHhcccCccceeccCchhhHHHhhhcCCeeeccccc---cchhhHHHHHHHhhhceEEeeecCC
Q 012645 319 SVGETGLVVRWCNQF-EVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQF---SDQPTNAKFVEEVWEVGVRAKKNRA 394 (459)
Q Consensus 319 ~~~~~v~v~~~~p~~-~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~---~DQ~~na~rv~~~~G~G~~~~~~~~ 394 (459)
....++.+.+|.++. ++|+.+++ +|||||.||+.|++++|+|+|++|+. .||..||.+++++ |+|..++..
T Consensus 228 ~~~~~~~v~~f~~~~~~lm~~adl--~It~~G~~T~~Eal~~g~P~I~iP~~~~~~~Q~~NA~~l~~~-G~~~~~~~~-- 302 (351)
T d1f0ka_ 228 AGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKA-GAAKIIEQP-- 302 (351)
T ss_dssp TTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHT-TSEEECCGG--
T ss_pred cccccceeeeehhhHHHHHHhCch--hhccccchHHHHHHHhCCceeeeecccCCchHHHHHHHHHHC-CCEEEechh--
Confidence 345788899998766 79977777 99999999999999999999999975 3799999999999 999999887
Q ss_pred CcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Q 012645 395 GIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLLK 452 (459)
Q Consensus 395 ~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~~ 452 (459)
+++.+.|.++|.++..+ +.+++++.+++. ....+.+.+.++|+.|.+
T Consensus 303 -~~~~e~l~~~l~~l~~~--------~~~~~~~~~~~~--~~~~~a~~i~~~i~~l~~ 349 (351)
T d1f0ka_ 303 -QLSVDAVANTLAGWSRE--------TLLTMAERARAA--SIPDATERVANEVSRVAR 349 (351)
T ss_dssp -GCCHHHHHHHHHTCCHH--------HHHHHHHHHHHT--CCTTHHHHHHHHHHHHHT
T ss_pred -hCCHHHHHHHHHhhCHH--------HHHHHHHHHHcc--CCccHHHHHHHHHHHHHh
Confidence 89999999999876322 233344444431 113345666666666654
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.23 E-value=1.6e-09 Score=104.25 Aligned_cols=95 Identities=17% Similarity=0.134 Sum_probs=64.2
Q ss_pred CCCceEEeeecHH---HHhcccCccceecc----CchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecC
Q 012645 321 GETGLVVRWCNQF---EVLAHQAVGCFITH----CGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNR 393 (459)
Q Consensus 321 ~~~v~v~~~~p~~---~lL~~~~~~~~I~H----GG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~ 393 (459)
+.++.+..++|+. .+++.+++ ++.- |...++.||+++|+|+|+.... .... +.+. +.|..++
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~adi--~v~~s~~e~~~~~~~Eama~G~Pvi~~~~g----~~~e-~i~~-~~G~~~~--- 376 (437)
T d2bisa1 308 GNVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLRD-IITN-ETGILVK--- 376 (437)
T ss_dssp TTEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHTTTCEEEEESCT----THHH-HCCT-TTCEEEC---
T ss_pred ccceeccccCcHHHHHHHHhhhcc--ccccccccccchHHHHHHHCCCCEEEeCCC----CcHH-hEEC-CcEEEEC---
Confidence 4445555778865 56667777 6543 4446999999999999876533 3333 3345 6676665
Q ss_pred CCcccHHHHHHHHHHHhc-Chh-hHHHHHHHHHHHHH
Q 012645 394 AGIVTGEELNKCVNEVMD-GER-SQKIKRNVSKWREF 428 (459)
Q Consensus 394 ~~~~~~~~l~~~i~~ll~-~~~-~~~~~~~a~~l~~~ 428 (459)
.-++++|.++|.++|+ |++ .+.+.+++++.++.
T Consensus 377 --~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~ 411 (437)
T d2bisa1 377 --AGDPGELANAILKALELSRSDLSKFRENCKKRAMS 411 (437)
T ss_dssp --TTCHHHHHHHHHHHHTTTTSCTHHHHHHHHHHHHH
T ss_pred --CCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 4678999999999986 432 35677777776543
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=98.94 E-value=2.2e-07 Score=86.23 Aligned_cols=144 Identities=17% Similarity=0.280 Sum_probs=90.2
Q ss_pred CCcEEEEEeCCcccCCHHHHHHHHHHHHhCC-----CcEEEEEeCCCCCCchhhh---hh--cCCCceEEeeecHH-HHh
Q 012645 268 EKSVIYVSFGSMADIAANQVDEIARGLKASE-----KPFLWVVKENENKLPVEFV---NS--VGETGLVVRWCNQF-EVL 336 (459)
Q Consensus 268 ~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~-----~~~v~~~~~~~~~~~~~~~---~~--~~~~v~v~~~~p~~-~lL 336 (459)
++.++++..|+.... .....+++++..+. ..++++.+... +..+. +. ..+++.+..+..+. .++
T Consensus 193 ~~~~~i~~~gr~~~~--Kg~~~li~a~~~l~~~~~~~~~~ii~g~~~---~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~ 267 (370)
T d2iw1a1 193 EQQNLLLQVGSDFGR--KGVDRSIEALASLPESLRHNTLLFVVGQDK---PRKFEALAEKLGVRSNVHFFSGRNDVSELM 267 (370)
T ss_dssp TTCEEEEEECSCTTT--TTHHHHHHHHHTSCHHHHHTEEEEEESSSC---CHHHHHHHHHHTCGGGEEEESCCSCHHHHH
T ss_pred ccceEEEEEeccccc--cchhhhcccccccccccccceeeecccccc---cccccccccccccccccccccccccccccc
Confidence 345778888887642 23555666665532 23334443321 12221 11 23567777666544 789
Q ss_pred cccCccceec--c--CchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcC
Q 012645 337 AHQAVGCFIT--H--CGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDG 412 (459)
Q Consensus 337 ~~~~~~~~I~--H--GG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~ 412 (459)
+.+++ +|. + |-..++.||+++|+|+|+.. .......+..- +.|..+.. .-+.+.+.++|.++++|
T Consensus 268 ~~adv--~v~ps~~E~~~~~~~EAma~G~PvI~s~----~~g~~e~i~~~-~~G~l~~~----~~d~~~la~~i~~ll~d 336 (370)
T d2iw1a1 268 AAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTA----VCGYAHYIADA-NCGTVIAE----PFSQEQLNEVLRKALTQ 336 (370)
T ss_dssp HHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEET----TSTTTHHHHHH-TCEEEECS----SCCHHHHHHHHHHHHHC
T ss_pred ccccc--cccccccccccceeeecccCCeeEEEeC----CCChHHHhcCC-CceEEEcC----CCCHHHHHHHHHHHHcC
Confidence 88888 663 2 34478999999999999864 34455567777 78866643 46899999999999999
Q ss_pred hh-hHHHHHHHHHHHH
Q 012645 413 ER-SQKIKRNVSKWRE 427 (459)
Q Consensus 413 ~~-~~~~~~~a~~l~~ 427 (459)
++ .+++.+++++..+
T Consensus 337 ~~~~~~~~~~ar~~~~ 352 (370)
T d2iw1a1 337 SPLRMAWAENARHYAD 352 (370)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 73 2344555555444
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=98.86 E-value=5.7e-09 Score=98.22 Aligned_cols=349 Identities=11% Similarity=0.078 Sum_probs=183.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEecCccccccCC--CCceEEEcCCCCCCCCCCCCCCHHHHHHHH
Q 012645 6 ERVHVLVLTYPAQGHINPLLQFAKRLASK-RVKATLATTHYTVKSIHA--TTVGVEPISDGFDEGGFKQAPSVKAYLESF 82 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p~~~la~~L~~~-Gh~V~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (459)
+||||++++ |++..+.-+.+|.++|.++ +.++.++.+..+.+.... .++... ++ +.-.......+.....
T Consensus 1 ~k~Ki~~v~-GtR~e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~~~i~--~~-~~~~~~~~~~~~~~~~--- 73 (377)
T d1o6ca_ 1 KKLKVMTVF-GTRPEAIKMAPLVLELKKYPEIDSYVTVTAQHRQMLDQVLDAFHIK--PD-FDLNIMKERQTLAEIT--- 73 (377)
T ss_dssp CCEEEEEEE-CSHHHHHHHHHHHHHGGGCTTEEEEEEECCSCGGGTHHHHHHTTCC--CS-EECCCCCTTCCHHHHH---
T ss_pred CCceEEEEE-EchHhHHHHHHHHHHHHhCCCCCEEEEEeCCCHHHHHHHHhhcCCC--Cc-eeeecCCCCCCHHHHH---
Confidence 589999888 9999999999999999886 579999988876443221 111111 10 0000001112222222
Q ss_pred HHhchHHHHHHHHHhhcCCCCccEEE--eCCCc-hhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCc
Q 012645 83 KTVGSRTLAEVILKYKDSESPVNCIV--YDSLL-TWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVP 159 (459)
Q Consensus 83 ~~~~~~~~~~l~~~~~~~~~~~Dlvi--~D~~~-~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 159 (459)
......+.+.+.+. +||+|| .|-+. .+++.+|..+|||.+-+...-
T Consensus 74 -~~~i~~~~~~~~~~-----kpD~v~v~GDr~e~la~a~aa~~~~Ipi~HiegG~------------------------- 122 (377)
T d1o6ca_ 74 -SNALVRLDELFKDI-----KPDIVLVHGDTTTTFAGSLAAFYHQIAVGHVEAGL------------------------- 122 (377)
T ss_dssp -HHHHHHHHHHHHHH-----CCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCCC-------------------------
T ss_pred -HHHHHhhhhhhhhc-----ccceeEeeecccccchhhhhhhhccceEEEEeccc-------------------------
Confidence 22223445555655 899876 45455 357889999999999975422
Q ss_pred ccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcC-CCeeeecccCCC-ccc
Q 012645 160 LTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGL-WPLVMIGPLVPS-AYL 237 (459)
Q Consensus 160 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~vgp~~~~-~~~ 237 (459)
... +. .....++..+..... -++..++.+-...+. +...-.. .+++.+|-..-+ ...
T Consensus 123 --------~s~-~~--------~~~~~de~~R~~isk--ls~~hf~~t~~~~~~--L~~~G~~~~~I~~vG~~~~D~i~~ 181 (377)
T d1o6ca_ 123 --------RTG-NK--------YSPFPEELNRQMTGA--IADLHFAPTGQAKDN--LLKENKKADSIFVTGNTAIDALNT 181 (377)
T ss_dssp --------CCS-CT--------TTTTTHHHHHHHHHH--HCSEEEESSHHHHHH--HHHTTCCGGGEEECCCHHHHHHHH
T ss_pred --------ccc-cc--------cccCchhhhcccccc--ceeEEeecchhhhhh--hhhhccccceEeeccchhHHHHHH
Confidence 000 00 001122333333322 245566666554332 1111111 248888843222 100
Q ss_pred cccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCC---HHHHHHHHHHHHhCCCcEEEEEeCCC-CCCc
Q 012645 238 DQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIA---ANQVDEIARGLKASEKPFLWVVKENE-NKLP 313 (459)
Q Consensus 238 ~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~---~~~~~~i~~a~~~~~~~~v~~~~~~~-~~~~ 313 (459)
... ....... +.....++.+++++-...... ...+..+...+..... +.|...... ....
T Consensus 182 ~~~------------~~~~~~~---~~~~~~~~~ilvt~Hr~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~ 245 (377)
T d1o6ca_ 182 TVR------------DGYSHPV---LDQVGEDKMILLTAHRRENLGEPMENMFKAIRRIVGEFED-VQVVYPVHLNPVVR 245 (377)
T ss_dssp HCC------------SSCCCST---TTTTTTSEEEEECC----------HHHHHHHHHHHHHCTT-EEEEEC----CHHH
T ss_pred HHH------------HHHhhhh---hhhccCCceEEEEeccccccccchHHHHHHHHhhcccccc-cccccccccccccc
Confidence 000 0000011 111124457888776544322 2334445555555432 333332221 1111
Q ss_pred hhhhh--hcCCCceEEeeecHH---HHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEE
Q 012645 314 VEFVN--SVGETGLVVRWCNQF---EVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVR 388 (459)
Q Consensus 314 ~~~~~--~~~~~v~v~~~~p~~---~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~ 388 (459)
..... ...+|+++.+.+++. .+|+++++ +|+-+|.+ ..||-+.|+|.|.+--..|++.- . +. |.-
T Consensus 246 ~~~~~~~~~~~ni~~~~~l~~~~fl~llk~s~~--vIgnSss~-i~Ea~~lg~P~Inir~~tERqe~-~---~~-g~n-- 315 (377)
T d1o6ca_ 246 EAAHKHFGDSDRVHLIEPLEVIDFHNFAAKSHF--ILTDSGGV-QEEAPSLGKPVLVLRDTTERPEG-V---EA-GTL-- 315 (377)
T ss_dssp HHHHHC--CCSSEEECCCCCHHHHHHHHHHCSE--EEEC--CH-HHHGGGGTCCEEEECSCCC---C-T---TT-TSS--
T ss_pred hhhhhccccccceEeccccchHHHHHHHhhhhe--eecccchh-HHhhhhhhceEEEeCCCCcCcch-h---hc-Cee--
Confidence 11111 135789998888765 57888888 99999988 66999999999999776665532 1 34 433
Q ss_pred eeecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Q 012645 389 AKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRL 450 (459)
Q Consensus 389 ~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l 450 (459)
+.. ..+.+.|.+++.+++++. .+.++..+... ...+|.+|...++.|+.++
T Consensus 316 ilv----~~~~~~I~~~i~~~l~~~---~~~~~~~~~~n----pYGdG~as~rI~~~L~~~~ 366 (377)
T d1o6ca_ 316 KLA----GTDEENIYQLAKQLLTDP---DEYKKMSQASN----PYGDGEASRRIVEELLFHY 366 (377)
T ss_dssp EEE----CSCHHHHHHHHHHHHHCH---HHHHHHHHCCC----TTCCSCHHHHHHHHHHHHT
T ss_pred EEC----CCCHHHHHHHHHHHHhCh---HHHhhhccCCC----CCCCChHHHHHHHHHHHhh
Confidence 332 468899999999999987 66665544332 2345566666666666554
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.74 E-value=1.5e-07 Score=91.43 Aligned_cols=136 Identities=12% Similarity=0.046 Sum_probs=83.7
Q ss_pred CCcEEEEEeCCccc-CCHHHHHHHHHHHHhCCCcEEEEEeCCCC--CCchhhhhhcCCCceEEeeecHH---HHhcccCc
Q 012645 268 EKSVIYVSFGSMAD-IAANQVDEIARGLKASEKPFLWVVKENEN--KLPVEFVNSVGETGLVVRWCNQF---EVLAHQAV 341 (459)
Q Consensus 268 ~~~~V~vs~Gs~~~-~~~~~~~~i~~a~~~~~~~~v~~~~~~~~--~~~~~~~~~~~~~v~v~~~~p~~---~lL~~~~~ 341 (459)
++.++++..|.... -..+.+...+..+.+.+.+++++..+... ..-.......++++.+..+.+.. .+++.+++
T Consensus 289 ~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~~~~~l~~~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD~ 368 (477)
T d1rzua_ 289 DGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDA 368 (477)
T ss_dssp SSSCEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESCCHHHHHHHHHHCSE
T ss_pred CCccEEEEEeeeeecCCcHHHHHHHHHHHhhCCeEEEEecCCchHHHHHHHHHhhcCCeEEEEcccChhHHHHHHHhCcc
Confidence 34467778888764 23344333333344467777776544210 00011223457888888766654 35666676
Q ss_pred cceeccC---chh-hHHHhhhcCCeeecccccc-----chhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhc
Q 012645 342 GCFITHC---GWN-SILEGLSLGVAVVAVPQFS-----DQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMD 411 (459)
Q Consensus 342 ~~~I~HG---G~g-s~~eal~~GvP~li~P~~~-----DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~ 411 (459)
+|.-. |.| +++||+++|+|+|+.-..+ ....+...+... +.|...+ ..++++|.++|.++++
T Consensus 369 --~v~PS~~E~fglv~lEAma~G~PvVas~~GG~~E~v~d~~~~~~~~~~-~~G~l~~-----~~d~~~la~ai~~~l~ 439 (477)
T d1rzua_ 369 --IIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKA-ATGVQFS-----PVTLDGLKQAIRRTVR 439 (477)
T ss_dssp --EEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTC-CCBEEES-----SCSHHHHHHHHHHHHH
T ss_pred --ccCCccccCCCHHHHHHHHcCCCEEEcCCCCCcceeecCCccccccCC-CceEEeC-----CCCHHHHHHHHHHHHh
Confidence 88766 344 7789999999999865431 223344444555 6777666 5789999999998875
|
| >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Escherichia coli [TaxId: 562]
Probab=98.53 E-value=3.7e-06 Score=78.33 Aligned_cols=327 Identities=12% Similarity=0.069 Sum_probs=176.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEecCccccccCC----CCceE-EEcCCCCCCCCCCCCCCHHHHHHH
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASK-RVKATLATTHYTVKSIHA----TTVGV-EPISDGFDEGGFKQAPSVKAYLES 81 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~-Gh~V~~~~~~~~~~~~~~----~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 81 (459)
|||++++ |++..+.-+.+|.++|.+. +.++.++.+..+.+.... .++.. ..+. +. ....+.....
T Consensus 1 MKi~~v~-GtR~e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~-- 71 (376)
T d1f6da_ 1 MKVLTVF-GTRPEAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKLFSIVPDYDLN--IM----QPGQGLTEIT-- 71 (376)
T ss_dssp CEEEEEE-CSHHHHHHHHHHHHHHHHCTTCEEEEEECCTTGGGGHHHHHHTTCCCSEECC--CC----SSSSCHHHHH--
T ss_pred CeEEEEE-EhhHhHHHHHHHHHHHHhCCCCCEEEEEcCCCHHHHHHHHHhcCCCCCcccc--cC----CCCCCHHHHH--
Confidence 8998888 9999999999999999886 689999998877543221 12210 0110 00 1112222222
Q ss_pred HHHhchHHHHHHHHHhhcCCCCccEEE--eCCCc-hhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCC
Q 012645 82 FKTVGSRTLAEVILKYKDSESPVNCIV--YDSLL-TWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETV 158 (459)
Q Consensus 82 ~~~~~~~~~~~l~~~~~~~~~~~Dlvi--~D~~~-~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 158 (459)
......+.+.+.+. +||+|+ .|-+. .+++.+|..++||++-+...-
T Consensus 72 --~~~i~~~~~~~~~~-----kPD~v~v~GDr~e~la~a~aa~~~~ipi~HiegG~------------------------ 120 (376)
T d1f6da_ 72 --CRILEGLKPILAEF-----KPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGL------------------------ 120 (376)
T ss_dssp --HHHHHHHHHHHHHH-----CCSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCC------------------------
T ss_pred --HHHHHhhHHHHHhc-----cCcceeeeccccchhhHHHHHHhhCceEEEEeccc------------------------
Confidence 22223445556655 899876 45554 457778999999999975422
Q ss_pred cccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcC-CCeeeecccCCC-cc
Q 012645 159 PLTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGL-WPLVMIGPLVPS-AY 236 (459)
Q Consensus 159 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~vgp~~~~-~~ 236 (459)
.. .+.. ....++..+.... .-++..++.+-...+. ....-.. .+++.+|-..-+ ..
T Consensus 121 ---------~s-~~~~--------~~~pde~~R~~is--kls~~hf~~~~~~~~~--L~~~G~~~~~I~~vG~~~~D~l~ 178 (376)
T d1f6da_ 121 ---------RT-GDLY--------SPWPEEANRTLTG--HLAMYHFSPTETSRQN--LLRENVADSRIFITGNTVIDALL 178 (376)
T ss_dssp ---------CC-SCTT--------SSTTHHHHHHHHH--HTCSEEEESSHHHHHH--HHHTTCCGGGEEECCCHHHHHHH
T ss_pred ---------cc-cccc--------ccCchhhhhhhhc--cceeEEEeccHHHHhH--HHhcCCCccccceecCchHHHHH
Confidence 00 0000 0011233333332 2245566666554332 1111111 347888843221 00
Q ss_pred ccccccCCccCCCCCCCCCh----hhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHH---HHHhCCCcEEEEEeCCC
Q 012645 237 LDQQIAGDSAYGANIWEPTG----DQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIAR---GLKASEKPFLWVVKENE 309 (459)
Q Consensus 237 ~~~~~~~~~~~g~~~~~~~~----~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~---a~~~~~~~~v~~~~~~~ 309 (459)
..... ....+ +.+..+......++.|+|++=...+... .+..+.. .+......+.|......
T Consensus 179 ~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~ilvt~H~~~~~~~-~~~~i~~~l~~~~~~~~~~~ii~p~~~ 247 (376)
T d1f6da_ 179 WVRDQ----------VMSSDKLRSELAANYPFIDPDKKMILVTGHRRESFGR-GFEEICHALADIATTHQDIQIVYPVHL 247 (376)
T ss_dssp HHHHH----------TTTCHHHHHHHHTTCTTCCTTSEEEEECCCCBSSCCH-HHHHHHHHHHHHHHHCTTEEEEEECCB
T ss_pred HHHhh----------hhccchhhhhhhccccccCCCCceEEEecccchhhhh-hHHHHHHHHhhhhhhcceeEEeccccc
Confidence 00000 00001 1111111122346688998765444443 2334443 44444455555554321
Q ss_pred C-CCchhhhh--hcCCCceEEeeecHH---HHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhh
Q 012645 310 N-KLPVEFVN--SVGETGLVVRWCNQF---EVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVW 383 (459)
Q Consensus 310 ~-~~~~~~~~--~~~~~v~v~~~~p~~---~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~ 383 (459)
. ........ ....|+++++.+++. .+|+++.+ +|+..|. ..-||-+.|+|.|.+-...+|+. ++ +.
T Consensus 248 ~~~~~~~~~~~~~~~~ni~~~~~l~~~~fl~ll~~a~~--vignSss-gi~Ea~~lg~P~Inir~~ter~~---~~-~~- 319 (376)
T d1f6da_ 248 NPNVREPVNRILGHVKNVILIDPQEYLPFVWLMNHAWL--ILTDSGG-IQEEAPSLGKPVLVMRDTTERPE---AV-TA- 319 (376)
T ss_dssp CHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHCSE--EEESSSG-GGGTGGGGTCCEEECSSCCSCHH---HH-HH-
T ss_pred chhhhhhHhhhhcccccceeeccccHHHHHHHHhhceE--EEecCcc-hHhhHHHhCCCEEEcCCCccCcc---ce-ec-
Confidence 1 00000111 134788888766655 57888888 9988754 35599999999998866666764 33 34
Q ss_pred hceEEeeecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHH
Q 012645 384 EVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSK 424 (459)
Q Consensus 384 G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~ 424 (459)
| ..+.- ..+.+.|.+++.+++++. .++++..+
T Consensus 320 g--~~i~v----~~~~~~I~~ai~~~l~~~---~~~~~~~~ 351 (376)
T d1f6da_ 320 G--TVRLV----GTDKQRIVEEVTRLLKDE---NEYQAMSR 351 (376)
T ss_dssp T--SEEEC----CSSHHHHHHHHHHHHHCH---HHHHHHHH
T ss_pred C--eeEEC----CCCHHHHHHHHHHHHhCh---Hhhhhhcc
Confidence 3 33332 468899999999999986 55554433
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=98.50 E-value=1.7e-06 Score=80.68 Aligned_cols=342 Identities=12% Similarity=0.035 Sum_probs=183.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHh-CCCeEEEEecCccccc----cCCCCceEEEcCCCCCCCCCCCCCCHHHHHHHHH
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLAS-KRVKATLATTHYTVKS----IHATTVGVEPISDGFDEGGFKQAPSVKAYLESFK 83 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~-~Gh~V~~~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (459)
||++++ |++..+.-+.+|.++|.+ .+.++.++.+..+.+. +...|+.-.. .+... ....++....
T Consensus 4 kI~~v~-GtR~e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~~~i~~d~---~l~~~--~~~~s~~~~~---- 73 (373)
T d1v4va_ 4 RVVLAF-GTRPEATKMAPVYLALRGIPGLKPLVLLTGQHREQLRQALSLFGIQEDR---NLDVM--QERQALPDLA---- 73 (373)
T ss_dssp EEEEEE-CSHHHHHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHHTTTCCCSE---ECCCC--SSCCCHHHHH----
T ss_pred eEEEEE-EhhHHHHHHHHHHHHHHhCCCCCEEEEEccCChhhhhCcchhcCCCccc---cCCCC--CCCCCHHHHH----
Confidence 555554 999999999999999987 4799998888876443 2223432110 01110 1112332222
Q ss_pred HhchHHHHHHHHHhhcCCCCccEEE--eCCCc-hhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCcc
Q 012645 84 TVGSRTLAEVILKYKDSESPVNCIV--YDSLL-TWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPL 160 (459)
Q Consensus 84 ~~~~~~~~~l~~~~~~~~~~~Dlvi--~D~~~-~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 160 (459)
..+...+.+++.+. +||+|+ .|-+. .+++.+|..++||.+-+....
T Consensus 74 ~~~~~~~~~~l~~~-----kPD~vlv~GDr~e~la~a~aa~~~~ipi~HiegG~-------------------------- 122 (373)
T d1v4va_ 74 ARILPQAARALKEM-----GADYVLVHGDTLTTFAVAWAAFLEGIPVGHVEAGL-------------------------- 122 (373)
T ss_dssp HHHHHHHHHHHHHT-----TCSEEEEESSCHHHHHHHHHHHHTTCCEEEETCCC--------------------------
T ss_pred HHHHHHHhhhhhhc-----CcccccccccCccchhHHHHHHHhhhhheeecccc--------------------------
Confidence 22223455566665 899987 46555 346778889999999975422
Q ss_pred cCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhc-CCCeeeecc-cCCCcccc
Q 012645 161 TLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLG-LWPLVMIGP-LVPSAYLD 238 (459)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~vgp-~~~~~~~~ 238 (459)
..+ +.. .. ..++..+.... .-++..++.+....+.. ...-. -.+++.+|- .+.....
T Consensus 123 -rsg-------~~~-----~~---~~de~~R~~is--kls~~hf~~t~~~~~~L--~~~Ge~~~~I~~vG~p~~D~i~~- 181 (373)
T d1v4va_ 123 -RSG-------NLK-----EP---FPEEANRRLTD--VLTDLDFAPTPLAKANL--LKEGKREEGILVTGQTGVDAVLL- 181 (373)
T ss_dssp -CCS-------CTT-----SS---TTHHHHHHHHH--HHCSEEEESSHHHHHHH--HTTTCCGGGEEECCCHHHHHHHH-
T ss_pred -ccc-------ccc-----cC---cchhhhhhhhc--cccceeeecchhhhhhh--hhhcccccceeecccchhhHHHh-
Confidence 000 000 00 01222222222 12455566665543321 11111 124777773 2222100
Q ss_pred ccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccC-CHHHHHHHHHHHHhCCCcEEEEEeCCCC-CCchhh
Q 012645 239 QQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADI-AANQVDEIARGLKASEKPFLWVVKENEN-KLPVEF 316 (459)
Q Consensus 239 ~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~-~~~~~~~i~~a~~~~~~~~v~~~~~~~~-~~~~~~ 316 (459)
...+.......+.++.+++++-...+. .......++..+......+.++...... ......
T Consensus 182 -----------------~~~~~~~~~~~~~~~~~lvt~hr~~n~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~ 244 (373)
T d1v4va_ 182 -----------------AAKLGRLPEGLPEGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNPVVREAV 244 (373)
T ss_dssp -----------------HHHHCCCCTTCCSSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSCHHHHHHH
T ss_pred -----------------hhhhcccccccccccceeEEeccccccchHHHHHHHHHHHhhhcccceeeeeecccccchhhh
Confidence 001111111223456888888765542 2344445555555544444444332211 000111
Q ss_pred hh--hcCCCceEEeeecHH---HHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeee
Q 012645 317 VN--SVGETGLVVRWCNQF---EVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKK 391 (459)
Q Consensus 317 ~~--~~~~~v~v~~~~p~~---~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~ 391 (459)
.+ ....|+.+++.+++. .+|.++.+ +|+.+|.+ ..||.+.|+|.|.+....|.+.. + +. |.-. ..
T Consensus 245 ~~~~~~~~n~~~~~~l~~~~~l~ll~~s~~--vignSssg-i~Ea~~lg~P~Inir~~~eRqeg-~---~~-g~nv--lv 314 (373)
T d1v4va_ 245 FPVLKGVRNFVLLDPLEYGSMAALMRASLL--LVTDSGGL-QEEGAALGVPVVVLRNVTERPEG-L---KA-GILK--LA 314 (373)
T ss_dssp HHHHTTCTTEEEECCCCHHHHHHHHHTEEE--EEESCHHH-HHHHHHTTCCEEECSSSCSCHHH-H---HH-TSEE--EC
T ss_pred hhhhcccccceeeccchHHHHHHHhhhcee--Eecccchh-hhcchhhcCcEEEeCCCccCHHH-H---hc-CeeE--Ec
Confidence 11 234688888777766 46877777 99997755 45999999999999775554442 2 35 5443 22
Q ss_pred cCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Q 012645 392 NRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRL 450 (459)
Q Consensus 392 ~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l 450 (459)
..+++.|.+++.++++++ .++++...... ...+|.+|...++.|.+.+
T Consensus 315 ----~~d~~~I~~~i~~~l~~~---~~~~~~~~~~n----pYGdG~as~rI~~~L~~~~ 362 (373)
T d1v4va_ 315 ----GTDPEGVYRVVKGLLENP---EELSRMRKAKN----PYGDGKAGLMVARGVAWRL 362 (373)
T ss_dssp ----CSCHHHHHHHHHHHHTCH---HHHHHHHHSCC----SSCCSCHHHHHHHHHHHHT
T ss_pred ----CCCHHHHHHHHHHHHcCH---HHHhhcccCCC----CCCCCHHHHHHHHHHHHHh
Confidence 578999999999999997 66665444322 2334445544444444433
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.63 E-value=8.5e-05 Score=60.26 Aligned_cols=136 Identities=10% Similarity=0.056 Sum_probs=83.0
Q ss_pred EEEeCCcccCCHHHHHHHHHHHHhCC-CcEEEEEeCCC-CCCchh----hhhhcCCCceEEeeecHH---HHhcccCccc
Q 012645 273 YVSFGSMADIAANQVDEIARGLKASE-KPFLWVVKENE-NKLPVE----FVNSVGETGLVVRWCNQF---EVLAHQAVGC 343 (459)
Q Consensus 273 ~vs~Gs~~~~~~~~~~~i~~a~~~~~-~~~v~~~~~~~-~~~~~~----~~~~~~~~v~v~~~~p~~---~lL~~~~~~~ 343 (459)
++..|.+.. ......++++++.+. .++++ ++... ....+. +.....+||++.+++|+. .+++.+++-.
T Consensus 15 ~l~iGrl~~--~K~~~~~i~a~~~l~~~~l~i-vg~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i 91 (166)
T d2f9fa1 15 WLSVNRIYP--EKRIELQLEVFKKLQDEKLYI-VGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCKGLL 91 (166)
T ss_dssp EEEECCSSG--GGTHHHHHHHHHHCTTSCEEE-EBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHCSEEE
T ss_pred EEEEecCcc--ccCHHHHHHHHHHhcCCeEEE-EEecccccchhhhhhhhcccccCcEEEeecccccccccccccccccc
Confidence 556677642 234555667776654 44444 44322 111111 222246799999999875 5777788733
Q ss_pred eeccC-c-hhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcChhhHHHHHH
Q 012645 344 FITHC-G-WNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRN 421 (459)
Q Consensus 344 ~I~HG-G-~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~ 421 (459)
+-+.. | ..++.||+++|+|+|+.+... +...+..- ..|... ..+.+++.++|.++++|++ .++++
T Consensus 92 ~ps~~e~~~~~~~Ea~~~g~pvi~s~~~~----~~e~i~~~-~~g~~~------~~d~~~~~~~i~~l~~~~~--~~~~~ 158 (166)
T d2f9fa1 92 CTAKDEDFGLTPIEAMASGKPVIAVNEGG----FKETVINE-KTGYLV------NADVNEIIDAMKKVSKNPD--KFKKD 158 (166)
T ss_dssp ECCSSCCSCHHHHHHHHTTCCEEEESSHH----HHHHCCBT-TTEEEE------CSCHHHHHHHHHHHHHCTT--TTHHH
T ss_pred cccccccccccccccccccccceeecCCc----ceeeecCC-cccccC------CCCHHHHHHHHHHHHhCHH--HHHHH
Confidence 32222 2 358999999999999876533 23334445 556533 2468999999999999862 45555
Q ss_pred HHH
Q 012645 422 VSK 424 (459)
Q Consensus 422 a~~ 424 (459)
+.+
T Consensus 159 ~~~ 161 (166)
T d2f9fa1 159 CFR 161 (166)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
|
| >d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: ADP-heptose LPS heptosyltransferase II domain: ADP-heptose LPS heptosyltransferase II species: Escherichia coli [TaxId: 562]
Probab=97.44 E-value=0.00058 Score=62.24 Aligned_cols=104 Identities=11% Similarity=0.014 Sum_probs=72.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEecCccccccCC-CCce-EEEcCCCCCCCCCCCCCCHHHHHHHHH
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASK--RVKATLATTHYTVKSIHA-TTVG-VEPISDGFDEGGFKQAPSVKAYLESFK 83 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~--Gh~V~~~~~~~~~~~~~~-~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (459)
||||++-..+.||+.=+.++.++|+++ +.+|++++.+.+.+.++. +.++ ++.++.. . ....
T Consensus 1 MkILii~~~~iGD~il~~p~i~~Lk~~~P~~~I~~l~~~~~~~l~~~~p~id~v~~~~~~--~----~~~~--------- 65 (348)
T d1pswa_ 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRMPEVNEAIPMPLG--H----GALE--------- 65 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTCTTEEEEEEC-------------C---------
T ss_pred CeEEEEcCCChHHHHHHHHHHHHHHHHCCCCEEEEEEChhHHHHHhhCCCcCEEEEecCc--c----ccch---------
Confidence 899999999999999999999999886 899999999999888776 3553 3433211 0 0001
Q ss_pred HhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEc
Q 012645 84 TVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMM 131 (459)
Q Consensus 84 ~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~ 131 (459)
......+...+... ++|++|.-........++...+++.....
T Consensus 66 ---~~~~~~l~~~l~~~--~~D~~i~~~~~~~~~~~~~~~~~~~~~~~ 108 (348)
T d1pswa_ 66 ---IGERRKLGHSLREK--RYDRAYVLPNSFKSALVPLFAGIPHRTGW 108 (348)
T ss_dssp ---HHHHHHHHHHTTTT--TCSEEEECSCCSGGGHHHHHTTCSEEEEE
T ss_pred ---hhhhhhHHHHhhhc--ccceEeecccccchhhHHHhhcccccccc
Confidence 11223455556544 89999865555556667788888887653
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=97.07 E-value=0.002 Score=53.33 Aligned_cols=93 Identities=17% Similarity=0.166 Sum_probs=61.1
Q ss_pred CCCceEEeeecHH---HHhcccCccceec----cCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecC
Q 012645 321 GETGLVVRWCNQF---EVLAHQAVGCFIT----HCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNR 393 (459)
Q Consensus 321 ~~~v~v~~~~p~~---~lL~~~~~~~~I~----HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~ 393 (459)
...+.+..+++.. .+++.+++ +|. .|-.+++.||+++|+|+|+.-. ... ..+... +.|..++
T Consensus 91 ~~~~~~~~~~~~~~l~~~~~~~di--~v~ps~~e~~~~~~~Eam~~G~pvI~~~~----~~~-~e~i~~-~~g~~~~--- 159 (196)
T d2bfwa1 91 GNVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGL-RDIITN-ETGILVK--- 159 (196)
T ss_dssp TTEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESC----HHH-HHHCCT-TTCEEEC---
T ss_pred ceeEEeeeccccccchhccccccc--cccccccccccccchhhhhcCceeeecCC----Ccc-ceeecC-CceeeEC---
Confidence 3444555788754 57777777 773 4556899999999999998532 122 233445 6676665
Q ss_pred CCcccHHHHHHHHHHHhc-Ch-hhHHHHHHHHHHH
Q 012645 394 AGIVTGEELNKCVNEVMD-GE-RSQKIKRNVSKWR 426 (459)
Q Consensus 394 ~~~~~~~~l~~~i~~ll~-~~-~~~~~~~~a~~l~ 426 (459)
.-+.+++.++|.++++ +. +.+.++++|++.+
T Consensus 160 --~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~~a 192 (196)
T d2bfwa1 160 --AGDPGELANAILKALELSRSDLSKFRENCKKRA 192 (196)
T ss_dssp --TTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred --CCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 5688999999999886 43 1234555555443
|
| >d1j9ja_ c.106.1.1 (A:) SurE homolog TM1662 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: SurE-like superfamily: SurE-like family: SurE-like domain: SurE homolog TM1662 species: Thermotoga maritima [TaxId: 2336]
Probab=94.38 E-value=0.072 Score=45.23 Aligned_cols=110 Identities=10% Similarity=0.035 Sum_probs=61.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCC-----CCceEEEcCCCCCCCCCCCCCCHHHHHHHH
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHA-----TTVGVEPISDGFDEGGFKQAPSVKAYLESF 82 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (459)
||||+.---+. |.--+..|+++|+ ++|+|+++.+...++-... ..+.+..+...-........+....-...
T Consensus 1 M~ILltNDDGi-~s~gl~~L~~~l~-~~~~V~vvAP~~~~S~~g~ait~~~~l~~~~~~~~~~~~~~~v~GTPaDcv~~- 77 (247)
T d1j9ja_ 1 MRILVTNDDGI-QSKGIIVLAELLS-EEHEVFVVAPDKERSATGHSITIHVPLWMKKVFISERVVAYSTTGTPADCVKL- 77 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHT-TTSEEEEEEESSCCTTCTTCCCCSSCCCEEECCCSSSEEEEEESSCHHHHHHH-
T ss_pred CeEEEEcCCCC-CChHHHHHHHHHh-cCCeEEEEecCCCCcCCcccccCCCCcceEEeecCCCceEEEeCCchHHHHHH-
Confidence 78888776555 3444778888885 6999999999877765443 13444443211000000111222211111
Q ss_pred HHhchHHHHHHHHHhhcCCCCccEEEeC----------CCc---hhHHHHHHHcCCceEEEcc
Q 012645 83 KTVGSRTLAEVILKYKDSESPVNCIVYD----------SLL---TWALDVARQFGIYGAAMMT 132 (459)
Q Consensus 83 ~~~~~~~~~~l~~~~~~~~~~~Dlvi~D----------~~~---~~~~~~a~~lgiP~v~~~~ 132 (459)
.+ ..+.. .+||+||+. .++ .+|+.-|..+|||.+.+|.
T Consensus 78 ------al----~~l~~--~~pDlVvSGIN~G~N~g~dv~ySGTVgAA~ea~~~gipsiA~S~ 128 (247)
T d1j9ja_ 78 ------AY----NVVMD--KRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISS 128 (247)
T ss_dssp ------HH----HTTST--TCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred ------hh----hhccc--CcccEEEecccCCCccchhhhhHHHHHHHHHHHhcCCCcceehh
Confidence 11 12222 289999963 233 3356666789999999985
|
| >d1ccwa_ c.23.6.1 (A:) Glutamate mutase, small subunit {Clostridium cochlearium [TaxId: 1494]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Cobalamin (vitamin B12)-binding domain family: Cobalamin (vitamin B12)-binding domain domain: Glutamate mutase, small subunit species: Clostridium cochlearium [TaxId: 1494]
Probab=93.28 E-value=0.053 Score=41.35 Aligned_cols=56 Identities=7% Similarity=-0.019 Sum_probs=43.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCc----cccccCCCCceEEEc
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHY----TVKSIHATTVGVEPI 60 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~----~~~~~~~~g~~~~~~ 60 (459)
|+|.||++.+.++.+|-....-++..|..+|++|.+++... +.+.+.+.+.+.+-+
T Consensus 1 ~~k~kVvi~~~~gD~H~lG~~mva~~l~~~G~~V~~LG~~~p~e~iv~a~~~~~~d~v~l 60 (137)
T d1ccwa_ 1 MEKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSPQELFIKAAIETKADAILV 60 (137)
T ss_dssp CCCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEECHHHHHHHHHHHTCSEEEE
T ss_pred CCCCEEEEEecCCChhHHHHHHHHHHHHHCCCeEEecccccCHHHHHHHHHhcCCCEEEE
Confidence 56789999999999999999999999999999999998642 223333345555544
|
| >d1l5xa_ c.106.1.1 (A:) SurE homolog PAE2908 (SurE-alpha) {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: SurE-like superfamily: SurE-like family: SurE-like domain: SurE homolog PAE2908 (SurE-alpha) species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=87.29 E-value=1.5 Score=37.26 Aligned_cols=109 Identities=10% Similarity=-0.044 Sum_probs=63.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCC-----CCceEEEcCCCCCCCCCCCCCCHHHHHHHH
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHA-----TTVGVEPISDGFDEGGFKQAPSVKAYLESF 82 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (459)
||||+.-=-+. |.--+..|+++|.+.| +|+++.+...++-... ..+.+..+...-.. .....+....-...-
T Consensus 1 M~ILlTNDDGi-~a~Gl~~L~~~l~~~g-~V~vvAP~~~~Sg~g~ait~~~pl~~~~~~~~~~~-~~~v~GTPaDCV~lg 77 (276)
T d1l5xa_ 1 MKILVTNDDGV-HSPGLRLLYQFALSLG-DVDVVAPESPKSATGLGITLHKPLRMYEVDLCGFR-AIATSGTPSDTVYLA 77 (276)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHGGGS-EEEEEEESSCTTTSCSSCCCSSCBCEEEEECSSSE-EEEESSCHHHHHHHH
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCCcCcccceeCCCCcEEEEeecCCce-EEEEcCcchhhhhhh
Confidence 78888776565 5566889999999998 6999998877655433 24555544311000 001112222211111
Q ss_pred HHhchHHHHHHHHHhhcCCCCccEEEeC----------CCc----hhHHHHHHHcCCceEEEccc
Q 012645 83 KTVGSRTLAEVILKYKDSESPVNCIVYD----------SLL----TWALDVARQFGIYGAAMMTN 133 (459)
Q Consensus 83 ~~~~~~~~~~l~~~~~~~~~~~Dlvi~D----------~~~----~~~~~~a~~lgiP~v~~~~~ 133 (459)
+.. + ..+||+||+. ..+ .+|+.-|..+|||.|.+|..
T Consensus 78 -------l~~----~---~~~pDlVvSGIN~G~N~G~dv~~~SGTVgAA~Ea~~~GipsIA~S~~ 128 (276)
T d1l5xa_ 78 -------TFG----L---GRKYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSAY 128 (276)
T ss_dssp -------HHH----H---TSCCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEEEEEEC
T ss_pred -------hcc----C---CCCCCEEEECCcCCccCCceeEEechHHHHHHHHHhcCCCceeeeec
Confidence 111 1 1279999953 222 34566677899999999863
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=86.72 E-value=0.42 Score=33.50 Aligned_cols=90 Identities=11% Similarity=0.035 Sum_probs=56.0
Q ss_pred CCCCCCC-cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCcc--ccccCCCCceEEEcCCCCCCCCCCCCCCHHH
Q 012645 1 MENQRER-VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYT--VKSIHATTVGVEPISDGFDEGGFKQAPSVKA 77 (459)
Q Consensus 1 m~~~~~~-~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 77 (459)
|-..|++ +||-|+..++.| +-+||+.|.++||+|+-.=.... .+.+.+.|+.+..-. ..
T Consensus 1 ~~~~~~~~~~ihfiGigG~G----Ms~LA~~L~~~G~~VsGSD~~~~~~~~~L~~~Gi~v~~g~---~~----------- 62 (96)
T d1p3da1 1 IIPEMRRVQQIHFIGIGGAG----MSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGH---AE----------- 62 (96)
T ss_dssp CCCCCTTCCEEEEETTTSTT----HHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTTCEEEESC---CG-----------
T ss_pred CCccchhCCEEEEEEECHHH----HHHHHHHHHhCCCEEEEEeCCCChhhhHHHHCCCeEEECC---cc-----------
Confidence 3344444 589999999888 56789999999999985422111 112222455543211 00
Q ss_pred HHHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCchh---HHHHHHHcCCceEE
Q 012645 78 YLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTW---ALDVARQFGIYGAA 129 (459)
Q Consensus 78 ~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~---~~~~a~~lgiP~v~ 129 (459)
+.+ .+.|+||....... -...|++.|||++.
T Consensus 63 -----------------~~i----~~~d~vV~S~AI~~~npel~~A~~~gipiik 96 (96)
T d1p3da1 63 -----------------EHI----EGASVVVVSSAIKDDNPELVTSKQKRIPVIQ 96 (96)
T ss_dssp -----------------GGG----TTCSEEEECTTSCTTCHHHHHHHHTTCCEEE
T ss_pred -----------------ccC----CCCCEEEECCCcCCCCHHHHHHHHcCCCEEC
Confidence 001 14699998876543 47789999999873
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=86.37 E-value=0.18 Score=41.78 Aligned_cols=54 Identities=13% Similarity=0.268 Sum_probs=42.1
Q ss_pred CCCcEEEEEcCCCccCHHHH------------HHHHHHHHhCCCeEEEEecCccccccCCCCceEEEc
Q 012645 5 RERVHVLVLTYPAQGHINPL------------LQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPI 60 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~------------~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~ 60 (459)
.+.+|||+...|+.-++.|. .+||+++.++||+|++++++.... ...++..+.+
T Consensus 4 l~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~--~p~~~~~~~~ 69 (223)
T d1u7za_ 4 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP--TPPFVKRVDV 69 (223)
T ss_dssp TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC--CCTTEEEEEC
T ss_pred cCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccC--ccccccccee
Confidence 56789999999999888884 789999999999999999986432 1135555544
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=83.97 E-value=0.49 Score=32.60 Aligned_cols=82 Identities=6% Similarity=-0.041 Sum_probs=53.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCc--cccccCCCCceEEEcCCCCCCCCCCCCCCHHHHHHHHHHh
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHY--TVKSIHATTVGVEPISDGFDEGGFKQAPSVKAYLESFKTV 85 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (459)
|||-|+..++.| +-+||+.|+++||+|+-.=-.. ..+.+++.|+.+.. . ... .+
T Consensus 2 ~~ihfiGIgG~G----Ms~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~Gi~i~~-g--h~~------~~----------- 57 (89)
T d1j6ua1 2 MKIHFVGIGGIG----MSAVALHEFSNGNDVYGSNIEETERTAYLRKLGIPIFV-P--HSA------DN----------- 57 (89)
T ss_dssp CEEEEETTTSHH----HHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCCEES-S--CCT------TS-----------
T ss_pred cEEEEEeECHHH----HHHHHHHHHhCCCeEEEEeCCCChhHHHHHHCCCeEEe-e--ecc------cc-----------
Confidence 899999988877 7779999999999987652211 11223345665531 1 011 00
Q ss_pred chHHHHHHHHHhhcCCCCccEEEeCCCch---hHHHHHHHcCCceE
Q 012645 86 GSRTLAEVILKYKDSESPVNCIVYDSLLT---WALDVARQFGIYGA 128 (459)
Q Consensus 86 ~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~---~~~~~a~~lgiP~v 128 (459)
+ ..+|+||+..... .-...|++.|||+.
T Consensus 58 -----------i----~~~d~vV~SsAI~~~npel~~A~~~gIpv~ 88 (89)
T d1j6ua1 58 -----------W----YDPDLVIKTPAVRDDNPEIVRARMERVPIE 88 (89)
T ss_dssp -----------C----CCCSEEEECTTCCTTCHHHHHHHHTTCCEE
T ss_pred -----------c----CCCCEEEEecCcCCCCHHHHHHHHcCCCcc
Confidence 0 1579999886543 45788999999975
|
| >d1vkza2 c.30.1.1 (A:4-93) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide synthetase (GAR-syn), N-domain species: Thermotoga maritima [TaxId: 2336]
Probab=83.72 E-value=0.45 Score=32.77 Aligned_cols=31 Identities=16% Similarity=0.175 Sum_probs=26.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
||||++..|++-| +||+.|.+..++|.++..
T Consensus 1 MkVLviGsGgREH-----Aia~~l~~s~~~v~~~pG 31 (90)
T d1vkza2 1 VRVHILGSGGREH-----AIGWAFAKQGYEVHFYPG 31 (90)
T ss_dssp CEEEEEECSHHHH-----HHHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCCHHHH-----HHHHHHhcCCCeEEEecC
Confidence 8999999999999 568999999999887643
|
| >d7reqa2 c.23.6.1 (A:561-728) Methylmalonyl-CoA mutase alpha subunit, C-terminal domain {Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Cobalamin (vitamin B12)-binding domain family: Cobalamin (vitamin B12)-binding domain domain: Methylmalonyl-CoA mutase alpha subunit, C-terminal domain species: Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]
Probab=81.65 E-value=0.7 Score=36.07 Aligned_cols=56 Identities=18% Similarity=0.146 Sum_probs=43.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccc----cccCCCCceEEEcC
Q 012645 6 ERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTV----KSIHATTVGVEPIS 61 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~----~~~~~~g~~~~~~~ 61 (459)
++.||++.+.+..+|-.-.--++..|...|++|......... +.+.+.+.+.+-+.
T Consensus 36 r~pkVlla~~g~D~Hd~G~~~va~~l~~~G~eVi~lg~~~~~e~iv~aa~~~~advI~iS 95 (168)
T d7reqa2 36 RRPRILLAKMGQDGHDRGQKVIATAYADLGFDVDVGPLFQTPEETARQAVEADVHVVGVS 95 (168)
T ss_dssp SCCEEEEECBTTCCCCHHHHHHHHHHHHTTCEEEECCTTBCHHHHHHHHHHHTCSEEEEE
T ss_pred CCCeEEEEeCCccHHHHHHHHHHHHHHhCCcceecCCCcCcHHHHHHHHHccCCCEEEEe
Confidence 467999999999999999999999999999999998654332 22333455555553
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=81.02 E-value=2.7 Score=38.51 Aligned_cols=111 Identities=9% Similarity=0.035 Sum_probs=70.3
Q ss_pred CCceEEeeecHH---HHhcccCccceec---cCchh-hHHHhhhcCCe-----eeccccccchhhHHHHHHHhhhceEEe
Q 012645 322 ETGLVVRWCNQF---EVLAHQAVGCFIT---HCGWN-SILEGLSLGVA-----VVAVPQFSDQPTNAKFVEEVWEVGVRA 389 (459)
Q Consensus 322 ~~v~v~~~~p~~---~lL~~~~~~~~I~---HGG~g-s~~eal~~GvP-----~li~P~~~DQ~~na~rv~~~~G~G~~~ 389 (459)
+.+++...+++. .+++.+++ ++. .-|+| +..|++++|+| +|+--+.+ .-+.+ +-|..+
T Consensus 331 ~~v~~~~~~~~~~l~a~~~~Adv--~v~~s~~EG~~lv~~Ea~a~~~p~~~g~lIlS~~~G-------~~~~l-~~g~lV 400 (456)
T d1uqta_ 331 PLYYLNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG-------AANEL-TSALIV 400 (456)
T ss_dssp SEEEECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBG-------GGGTC-TTSEEE
T ss_pred ceeeccCCcCHHHHhHHHhhhce--eecCCccCCCCcHHHHHHHhCCCCCCCcEEEeCCCC-------CHHHh-CCeEEE
Confidence 334455666665 45556666 553 45665 78999999999 33333321 11223 446555
Q ss_pred eecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Q 012645 390 KKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLLKA 453 (459)
Q Consensus 390 ~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~~~ 453 (459)
+ -.+.+.++++|.++|+++. ++-+++.+++.+.+.+ .+...=.+.++++|.+-
T Consensus 401 n-----P~d~~~~A~ai~~aL~~~~-~er~~~~~~~~~~v~~-----~~~~~W~~~fl~~l~~~ 453 (456)
T d1uqta_ 401 N-----PYDRDEVAAALDRALTMSL-AERISRHAEMLDVIVK-----NDINHWQECFISDLKQI 453 (456)
T ss_dssp C-----TTCHHHHHHHHHHHHTCCH-HHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHS
T ss_pred C-----cCCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHH-----CCHHHHHHHHHHHHHhh
Confidence 5 5789999999999998652 1344555566666554 56566788999998764
|