Citrus Sinensis ID: 012649

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------46
MEREGYRGRGRGRGGRDGGSRGGRTGGGDFRHHQPRPQQPQWRRSAPSPGHGSPSPPVRPWSGPMSPAVRAPSPQPRPQPPPDPSASPVVRPVVAEIQKLKISEPVASSSSSSSHNAARYTPIKRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKTVLAIVRNKLCEDYPDQFPLSMTAYDGEKNIFSAIELPTGKFNVEFPEGEDMKYRTYVFTIKLVNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRRMISVGRSFHPVEPFPDDDLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHINFDVNGFRDWRKVENALKGLKHGFTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYHEAVMEGQSPASVSSSSSSLTSTSLSSDASFDERFYKLHTDLENMMYFV
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccEEEEEEEEEEEEEcccccEEEEEEEEEccccccccccccccHHHHHHHHHHHHHHcccccccccEEEcccEEEEEccccccccEEEEcccccccccEEEEEEEEEEEEEcHHHHHHHHccccccccccHHHHHHHHHHHcccccccccccccccccccccccccccEEEEEcEEEEEEcccccEEEccccccccccccccHHHHHHHHHccccccccHHHHHHHHHHcccccccccccEEEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHcccccEEEc
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEEEEEEEcccccEEEEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHcccccccEcccccEEcccccccccEEEEEEEcccccEEEEEEEEEEEEEccHHHHHHHHccccccccHHHHHHHHHHHHHcccccccEcccccccccccccccccccEEEEccccccccccHcccEEEEEccHHHHcccHHHHHHHHHHHcccccccccccccEEEEEcccEEEEccccEEEEEEEEEEEEccccEccccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHcHHccEEEEEc
meregyrgrgrgrggrdggsrggrtgggdfrhhqprpqqpqwrrsapspghgspsppvrpwsgpmspavrapspqprpqpppdpsaspvvrpVVAEIQKLkisepvassssssshnaarytpikrpdgggtlaIRTVNIFVnhfpvnftpestirhydidvkpdigpnhgrpvklSKTVLAIVRNKLcedypdqfplsmtaydgeknifsaielptgkfnvefpegedmkyRTYVFTIKLVNELKLcklkeyltgslfsiprdILQGMDVvmkenpsrrmisvgrsfhpvepfpdddlgygltasrgfqhgLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHINFDVNGFRDWRKVENALKglkhgftsdQLQKLIYNMCFtfarctkpvslvppvyyADLVAYRGRLYHEAvmegqspasvssssssltstslssdasfDERFYKLHTDLENMMYFV
meregyrgrgrgrggrdggsrggrtgggdfrhhqprpqqpqwRRSAPSPGHGSPSPPVRPWSGPMSPAVRAPSPQPRPQPPPDPSASPVVRPVVAEIQKLKisepvassssssshnaarytpikrpdgggTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPdigpnhgrpvklSKTVLAIVRNKLCEDYPDQFPLSMTAYDGEKNIFSAIELPTGKFNVEFPEGEDMKYRTYVFTIKLVNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRRMISVGRSFHPVEPFPDDDLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHINFDVNGFRDWRKVENALKGLKHGFTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYHEAVMEGQspasvssssssltstslssdasfdERFYKLHTDLENMMYFV
MEregyrgrgrgrggrdggsrggrtgggDFrhhqprpqqpqwrrsapspghgspsppvrpWSGPMspavrapspqprpqpppdpsaspvvrpvvaEIQKLKISEPVAsssssssHNAARYTPIKRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKTVLAIVRNKLCEDYPDQFPLSMTAYDGEKNIFSAIELPTGKFNVEFPEGEDMKYRTYVFTIKLVNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRRMISVGRSFHPVEPFPDDDLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHINFDVNGFRDWRKVENALKGLKHGFTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYHEAVMEGQspasvssssssltstslssdasFDERFYKLHTDLENMMYFV
********************************************************************************************************************************GGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKTVLAIVRNKLCEDYPDQFPLSMTAYDGEKNIFSAIELPTGKFNVEFPEGEDMKYRTYVFTIKLVNELKLCKLKEYLTGSLFSIPRDILQGMDVVMK*******ISVGRSFHPVEPFPDDDLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHINFDVNGFRDWRKVENALKGLKHGFTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYHEAV******************************FYKLHT*********
************************************************************************************************************************************AIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKTVLAIVRNKLCEDYPDQFPLSMTAYDGEKNIFSAIELPTGKFNVEFPEGEDMKYRTYVFTIKLVNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRRMISVGRSFHPVEPFPDDDLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHINFDVNGFRDWRKVENALKGLKHGFTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYH**********************************YKLHTDLENMMYFV
**********************GRTGGGDF**********************************************************VVRPVVAEIQKLKI****************RYTPIKRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKTVLAIVRNKLCEDYPDQFPLSMTAYDGEKNIFSAIELPTGKFNVEFPEGEDMKYRTYVFTIKLVNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRRMISVGRSFHPVEPFPDDDLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHINFDVNGFRDWRKVENALKGLKHGFTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYHEAVM***********************ASFDERFYKLHTDLENMMYFV
************************************************************************************************************************TPIKRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKTVLAIVRNKLCEDYPDQFPLSMTAYDGEKNIFSAIELPTGKFNVEFPEGEDMKYRTYVFTIKLVNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRRMISVGRSFHPVEPFPDDDLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHINFDVNGFRDWRKVENALKGLKHGFTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYHEA*************************ASFDERFYKLHTDLENMMYFV
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MEREGYRGRGRGRGGRDGGSRGGRTGGGDFRHHQPRPQQPQWRRSAPSPGHGSPSPPVRPWSGPMSPAVRAPSPQPRPQPPPDPSASPVVRPVVAEIQKLKISEPVASSSSSSSHNAARYTPIKRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKTVLAIVRNKLCEDYPDQFPLSMTAYDGEKNIFSAIELPTGKFNVEFPEGEDMKYRTYVFTIKLVNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRRMISVGRSFHPVEPFPDDDLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHINFDVNGFRDWRKVENALKGLKHGFTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYHEAVMEGQSPASVSSSSSSLTSTSLSSDASFDERFYKLHTDLENMMYFV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query459 2.2.26 [Sep-21-2011]
Q9SHF3 1014 Protein argonaute 2 OS=Ar yes no 0.668 0.302 0.501 4e-80
Q9SHF2 1194 Protein argonaute 3 OS=Ar no no 0.527 0.202 0.488 7e-56
Q7XTS4 1034 Protein argonaute 2 OS=Or yes no 0.481 0.213 0.370 4e-37
Q7XTS3 1109 Protein argonaute 3 OS=Or no no 0.529 0.219 0.368 9e-33
Q5Z5B2 1038 Protein argonaute 1D OS=O no no 0.692 0.306 0.279 2e-24
Q6K972 1011 Protein argonaute 1C OS=O no no 0.599 0.272 0.286 8e-24
O04379 1048 Protein argonaute 1 OS=Ar no no 0.610 0.267 0.3 3e-23
Q9QZ81 860 Protein argonaute-2 OS=Ra yes no 0.538 0.287 0.309 4e-23
Q8CJG0 860 Protein argonaute-2 OS=Mu yes no 0.538 0.287 0.309 4e-23
O77503 840 Protein argonaute-2 (Frag yes no 0.540 0.295 0.317 1e-22
>sp|Q9SHF3|AGO2_ARATH Protein argonaute 2 OS=Arabidopsis thaliana GN=AGO2 PE=1 SV=1 Back     alignment and function desciption
 Score =  298 bits (764), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 171/341 (50%), Positives = 225/341 (65%), Gaps = 34/341 (9%)

Query: 33  HQPRPQQPQWRRSAPSPGHGSPSPPVRPWSGPMSPAVRAPSPQPRPQPPPDPSASP---- 88
            QPRPQ       AP P     S     ++G +       +   +PQ P D SASP    
Sbjct: 85  QQPRPQ------VAPQPSQAPAS-----YAGSVGGVAGRGAWGRKPQVPSD-SASPSTST 132

Query: 89  --VVRPV-VAEIQKLKISEPVASSSSSSSHNAARYTPIKRPDGGGTLAIRTVNIFVNHFP 145
             V  PV VAE+  LK S  VA+S         R  P+KRPD GG +A+R VN++VNH+ 
Sbjct: 133 TVVSEPVRVAEVMNLKPSVQVATSD--------RKEPMKRPDRGGVVAVRRVNLYVNHYK 184

Query: 146 VNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKTVLAIVRNKLCEDYPDQFPLSMTAYDGE 205
           VNF PES IRHYD+++K +I        K+S+  LA+VR+K+  D PD+FPL+MTAYDG+
Sbjct: 185 VNFNPESVIRHYDVEIKGEIPTK-----KVSRFELAMVRDKVFTDNPDEFPLAMTAYDGQ 239

Query: 206 KNIFSAIELPTGKFNVEFPEGEDMKYRTYVFTIKLVNELKLCKLKEYLTGSLFSIPRDIL 265
           KNIFSA+ELPTG + VE+P+ E+M+ R+Y FTIK VN LKL  LKEY+TG     PRD+L
Sbjct: 240 KNIFSAVELPTGSYKVEYPKTEEMRGRSYTFTIKQVNVLKLGDLKEYMTGRSSFNPRDVL 299

Query: 266 QGMDVVMKENPSRRMISVGRSFHPVEPFPDDDLGYGLTASRGFQHGLKATSQGLALCLDY 325
           QGMDVVMKE+PS+ MI+VG+SF   E  PD+D  +G+ A++G++H LK T+QGL+LCLDY
Sbjct: 300 QGMDVVMKEHPSKCMITVGKSFFTRETEPDEDFRFGVIAAKGYRHTLKPTAQGLSLCLDY 359

Query: 326 SVLAFRKRLPVIDFLQEHINF-DVNGFRDWRKVENALKGLK 365
           SVLAFRK + VI++L+ + N+ D+  FR  R VE  L GLK
Sbjct: 360 SVLAFRKAMSVIEYLKLYFNWSDMRQFRR-RDVEEELIGLK 399
Involved in RNA-mediated post-transcriptional gene silencing (PTGS). Main component of the RNA-induced silencing complex (RISC) that binds to a short guide RNA such as microRNA (miRNA) or small interfering RNA (siRNA). RISC uses the mature miRNA or siRNA as a guide for slicer-directed cleavage of homologous mRNAs to repress gene expression. Associates mainly with siRNAs of 21 nucleotide in length and preferentially recruits small RNAs with a 5' terminal adenosine. Probably involved in antiviral RNA silencing. Associates with siRNA derived from cucumber mosaic virus (CMV). Targeted by turnip yellows virus (TuYV) protein P0 (via F-box-like domain) for probable proteasome degradation and thereby inactivating AGO2 function in RNA silencing.
Arabidopsis thaliana (taxid: 3702)
>sp|Q9SHF2|AGO3_ARATH Protein argonaute 3 OS=Arabidopsis thaliana GN=AGO3 PE=3 SV=1 Back     alignment and function description
>sp|Q7XTS4|AGO2_ORYSJ Protein argonaute 2 OS=Oryza sativa subsp. japonica GN=AGO2 PE=2 SV=2 Back     alignment and function description
>sp|Q7XTS3|AGO3_ORYSJ Protein argonaute 3 OS=Oryza sativa subsp. japonica GN=AGO3 PE=2 SV=2 Back     alignment and function description
>sp|Q5Z5B2|AGO1D_ORYSJ Protein argonaute 1D OS=Oryza sativa subsp. japonica GN=AGO1D PE=2 SV=1 Back     alignment and function description
>sp|Q6K972|AGO1C_ORYSJ Protein argonaute 1C OS=Oryza sativa subsp. japonica GN=AGO1C PE=2 SV=1 Back     alignment and function description
>sp|O04379|AGO1_ARATH Protein argonaute 1 OS=Arabidopsis thaliana GN=AGO1 PE=1 SV=1 Back     alignment and function description
>sp|Q9QZ81|AGO2_RAT Protein argonaute-2 OS=Rattus norvegicus GN=Eif2c2 PE=2 SV=2 Back     alignment and function description
>sp|Q8CJG0|AGO2_MOUSE Protein argonaute-2 OS=Mus musculus GN=Eif2c2 PE=1 SV=3 Back     alignment and function description
>sp|O77503|AGO2_RABIT Protein argonaute-2 (Fragment) OS=Oryctolagus cuniculus GN=EIF2C2 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query459
255559057338 eukaryotic translation initiation factor 0.592 0.804 0.701 1e-104
359484080 1038 PREDICTED: protein argonaute 2-like [Vit 0.572 0.253 0.615 1e-88
296085336 994 unnamed protein product [Vitis vinifera] 0.555 0.256 0.645 4e-88
147765836 1059 hypothetical protein VITISV_007817 [Viti 0.572 0.248 0.615 6e-88
296085333 983 unnamed protein product [Vitis vinifera] 0.708 0.330 0.492 4e-80
359484078 979 PREDICTED: protein argonaute 2-like [Vit 0.708 0.331 0.492 4e-80
145336300 1014 Argonaute family protein [Arabidopsis th 0.668 0.302 0.501 3e-78
147832269 1270 hypothetical protein VITISV_027314 [Viti 0.664 0.240 0.507 3e-78
297851938 1023 hypothetical protein ARALYDRAFT_473645 [ 0.684 0.306 0.492 2e-77
225465702 948 PREDICTED: protein argonaute 2-like [Vit 0.664 0.321 0.493 1e-76
>gi|255559057|ref|XP_002520551.1| eukaryotic translation initiation factor 2c, putative [Ricinus communis] gi|223540265|gb|EEF41837.1| eukaryotic translation initiation factor 2c, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 193/275 (70%), Positives = 217/275 (78%), Gaps = 3/275 (1%)

Query: 97  IQKLKISEPVASSSSSSSHNAARYTPIKRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRH 156
           ++ L IS  +AS SSS    A R  P+KRPD GG LAIRT N+ VNHFPV F  E  IRH
Sbjct: 1   MRSLNISRHLASCSSSLD-TATRVVPVKRPDKGGRLAIRTANLRVNHFPVRFNSECIIRH 59

Query: 157 YDIDVKPDIGPNHGRPVKLSKTVLAIVRNKLCEDYPDQFPLSMTAYDGEKNIFSAIELPT 216
           YDIDVKPD+ P  GR VK+SK+ LA +RNKL  + P QFPLSMTAYDGEKNIFSA+ LPT
Sbjct: 60  YDIDVKPDVAPKGGRAVKMSKSNLATIRNKLFTEDPSQFPLSMTAYDGEKNIFSAVPLPT 119

Query: 217 GKFNVEFPEGEDMKYRTYVFTIKLVNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENP 276
           GKF VEF EGEDM+ RTY FTIK V+ELKLCKLK+YL+G L SIPRDILQGMDVVMKENP
Sbjct: 120 GKFKVEFSEGEDMRDRTYTFTIKFVSELKLCKLKDYLSGKLLSIPRDILQGMDVVMKENP 179

Query: 277 SRRMISVGRSFHPVEPFPDDDLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPV 336
           +R MISVGRSFH V    +D LGYG+TAS+GFQH LK T QGLA+CLDYSVLAFRKRLPV
Sbjct: 180 ARHMISVGRSFHSVNACKEDSLGYGITASKGFQHSLKPTFQGLAMCLDYSVLAFRKRLPV 239

Query: 337 IDFLQEHI-NFDVNGFRDWRK-VENALKGLKHGFT 369
           IDFL E+I  F+VN FR +R+ VENALKGLK   T
Sbjct: 240 IDFLMEYIPGFNVNDFRSFRRDVENALKGLKVSVT 274

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359484080|ref|XP_002274220.2| PREDICTED: protein argonaute 2-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|296085336|emb|CBI29068.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147765836|emb|CAN66699.1| hypothetical protein VITISV_007817 [Vitis vinifera] Back     alignment and taxonomy information
>gi|296085333|emb|CBI29065.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359484078|ref|XP_003633060.1| PREDICTED: protein argonaute 2-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|145336300|ref|NP_174413.2| Argonaute family protein [Arabidopsis thaliana] gi|75205505|sp|Q9SHF3.1|AGO2_ARATH RecName: Full=Protein argonaute 2 gi|6692120|gb|AAF24585.1|AC007654_1 T19E23.7 [Arabidopsis thaliana] gi|332193214|gb|AEE31335.1| Argonaute family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|147832269|emb|CAN62291.1| hypothetical protein VITISV_027314 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297851938|ref|XP_002893850.1| hypothetical protein ARALYDRAFT_473645 [Arabidopsis lyrata subsp. lyrata] gi|297339692|gb|EFH70109.1| hypothetical protein ARALYDRAFT_473645 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|225465702|ref|XP_002274149.1| PREDICTED: protein argonaute 2-like [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query459
TAIR|locus:2197545 1014 AGO2 "argonaute 2" [Arabidopsi 0.522 0.236 0.578 1.6e-96
TAIR|locus:2197550 1194 AGO3 "ARGONAUTE 3" [Arabidopsi 0.514 0.197 0.510 6.9e-77
TAIR|locus:2057851 997 AGO5 "ARGONAUTE 5" [Arabidopsi 0.503 0.231 0.326 3e-36
UNIPROTKB|Q69VD5 979 PHN1 "Protein argonaute PNH1" 0.501 0.234 0.307 4.3e-36
UNIPROTKB|Q851R2 1058 MEL1 "Protein argonaute MEL1" 0.520 0.225 0.310 1.4e-35
UNIPROTKB|Q4KLV6 884 eif2c4 "Protein argonaute-4" [ 0.540 0.280 0.321 1.5e-35
ZFIN|ZDB-GENE-030131-5357 874 ago4 "argonaute RISC catalytic 0.540 0.283 0.313 2.4e-35
UNIPROTKB|F1MXK6 850 EIF2C4 "Uncharacterized protei 0.546 0.295 0.306 3.6e-35
RGD|1304583 798 Ago4 "argonaute RISC catalytic 0.546 0.314 0.306 3.6e-35
UNIPROTKB|Q9HCK5 861 EIF2C4 "Protein argonaute-4" [ 0.546 0.291 0.306 3.7e-35
TAIR|locus:2197545 AGO2 "argonaute 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 717 (257.5 bits), Expect = 1.6e-96, Sum P(2) = 1.6e-96
 Identities = 144/249 (57%), Positives = 192/249 (77%)

Query:   119 RYTPIKRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKT 178
             R  P+KRPD GG +A+R VN++VNH+ VNF PES IRHYD+++K +I P      K+S+ 
Sbjct:   158 RKEPMKRPDRGGVVAVRRVNLYVNHYKVNFNPESVIRHYDVEIKGEI-PTK----KVSRF 212

Query:   179 VLAIVRNKLCEDYPDQFPLSMTAYDGEKNIFSAIELPTGKFNVEFPEGEDMKYRTYVFTI 238
              LA+VR+K+  D PD+FPL+MTAYDG+KNIFSA+ELPTG + VE+P+ E+M+ R+Y FTI
Sbjct:   213 ELAMVRDKVFTDNPDEFPLAMTAYDGQKNIFSAVELPTGSYKVEYPKTEEMRGRSYTFTI 272

Query:   239 KLVNELKLCKLKEYLTG-SLFSIPRDILQGMDVVMKENPSRRMISVGRSFHPVEPFPDDD 297
             K VN LKL  LKEY+TG S F+ PRD+LQGMDVVMKE+PS+ MI+VG+SF   E  PD+D
Sbjct:   273 KQVNVLKLGDLKEYMTGRSSFN-PRDVLQGMDVVMKEHPSKCMITVGKSFFTRETEPDED 331

Query:   298 LGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHINF-DVNGFRDWRK 356
               +G+ A++G++H LK T+QGL+LCLDYSVLAFRK + VI++L+ + N+ D+  FR  R 
Sbjct:   332 FRFGVIAAKGYRHTLKPTAQGLSLCLDYSVLAFRKAMSVIEYLKLYFNWSDMRQFRR-RD 390

Query:   357 VENALKGLK 365
             VE  L GLK
Sbjct:   391 VEEELIGLK 399
GO:0005737 "cytoplasm" evidence=ISM
GO:0035197 "siRNA binding" evidence=IDA
GO:0051607 "defense response to virus" evidence=IMP
GO:0042742 "defense response to bacterium" evidence=IMP
GO:0005515 "protein binding" evidence=IPI
TAIR|locus:2197550 AGO3 "ARGONAUTE 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2057851 AGO5 "ARGONAUTE 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q69VD5 PHN1 "Protein argonaute PNH1" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|Q851R2 MEL1 "Protein argonaute MEL1" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|Q4KLV6 eif2c4 "Protein argonaute-4" [Xenopus laevis (taxid:8355)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-5357 ago4 "argonaute RISC catalytic component 4" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1MXK6 EIF2C4 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
RGD|1304583 Ago4 "argonaute RISC catalytic component 4" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q9HCK5 EIF2C4 "Protein argonaute-4" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00031927001
SubName- Full=Chromosome undetermined scaffold_60, whole genome shotgun sequence; (876 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query459
cd04657426 cd04657, Piwi_ago-like, Piwi_ago-like: PIWI domain 3e-21
PLN03202 900 PLN03202, PLN03202, protein argonaute; Provisional 3e-15
smart00950301 smart00950, Piwi, This domain is found in the prot 2e-13
pfam0869952 pfam08699, DUF1785, Domain of unknown function (DU 5e-13
pfam02171296 pfam02171, Piwi, Piwi domain 3e-11
PLN03202900 PLN03202, PLN03202, protein argonaute; Provisional 9e-06
cd02826393 cd02826, Piwi-like, Piwi-like: PIWI domain 1e-04
pfam05887145 pfam05887, Trypan_PARP, Procyclic acidic repetitiv 1e-04
PRK05733172 PRK05733, PRK05733, single-stranded DNA-binding pr 2e-04
PRK04537572 PRK04537, PRK04537, ATP-dependent RNA helicase Rhl 6e-04
PHA032473151 PHA03247, PHA03247, large tegument protein UL36; P 8e-04
pfam04652315 pfam04652, DUF605, Vta1 like 9e-04
PRK07764824 PRK07764, PRK07764, DNA polymerase III subunits ga 0.001
PRK07764824 PRK07764, PRK07764, DNA polymerase III subunits ga 0.002
PRK07764824 PRK07764, PRK07764, DNA polymerase III subunits ga 0.002
PHA033771000 PHA03377, PHA03377, EBNA-3C; Provisional 0.003
pfam13388422 pfam13388, DUF4106, Protein of unknown function (D 0.003
PRK12323700 PRK12323, PRK12323, DNA polymerase III subunits ga 0.004
>gnl|CDD|240015 cd04657, Piwi_ago-like, Piwi_ago-like: PIWI domain, Argonaute-like subfamily Back     alignment and domain information 
 Score = 95.0 bits (237), Expect = 3e-21
 Identities = 27/44 (61%), Positives = 34/44 (77%)

Query: 367 GFTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLY 410
           GFT+D+LQ L YN+C+T+ARCT+ VS+ PP YYA L A R R Y
Sbjct: 382 GFTADELQTLTYNLCYTYARCTRSVSIPPPAYYAHLAAARARCY 425

Argonaute is the central component of the RNA-induced silencing complex (RISC) and related complexes. The PIWI domain is the C-terminal portion of Argonaute and consists of two subdomains, one of which provides the 5' anchoring of the guide RNA and the other, the catalytic site for slicing. Length = 426
>gnl|CDD|215631 PLN03202, PLN03202, protein argonaute; Provisional Back     alignment and domain information
>gnl|CDD|214930 smart00950, Piwi, This domain is found in the protein Piwi and its relatives Back     alignment and domain information
>gnl|CDD|219976 pfam08699, DUF1785, Domain of unknown function (DUF1785) Back     alignment and domain information
>gnl|CDD|216915 pfam02171, Piwi, Piwi domain Back     alignment and domain information
>gnl|CDD|215631 PLN03202, PLN03202, protein argonaute; Provisional Back     alignment and domain information
>gnl|CDD|239208 cd02826, Piwi-like, Piwi-like: PIWI domain Back     alignment and domain information
>gnl|CDD|114603 pfam05887, Trypan_PARP, Procyclic acidic repetitive protein (PARP) Back     alignment and domain information
>gnl|CDD|235585 PRK05733, PRK05733, single-stranded DNA-binding protein; Provisional Back     alignment and domain information
>gnl|CDD|235307 PRK04537, PRK04537, ATP-dependent RNA helicase RhlB; Provisional Back     alignment and domain information
>gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional Back     alignment and domain information
>gnl|CDD|218191 pfam04652, DUF605, Vta1 like Back     alignment and domain information
>gnl|CDD|236090 PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>gnl|CDD|236090 PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>gnl|CDD|236090 PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>gnl|CDD|177614 PHA03377, PHA03377, EBNA-3C; Provisional Back     alignment and domain information
>gnl|CDD|222095 pfam13388, DUF4106, Protein of unknown function (DUF4106) Back     alignment and domain information
>gnl|CDD|237057 PRK12323, PRK12323, DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 459
PLN03202 900 protein argonaute; Provisional 100.0
KOG1042 845 consensus Germ-line stem cell division protein Hiw 100.0
KOG1041 876 consensus Translation initiation factor 2C (eIF-2C 99.93
PF0869952 DUF1785: Domain of unknown function (DUF1785); Int 99.61
PLN03202900 protein argonaute; Provisional 99.21
KOG1041876 consensus Translation initiation factor 2C (eIF-2C 98.45
cd04657426 Piwi_ago-like Piwi_ago-like: PIWI domain, Argonaut 97.89
KOG1924 1102 consensus RhoA GTPase effector DIA/Diaphanous [Sig 97.65
cd02825115 PAZ PAZ domain, named PAZ after the proteins Piwi 97.46
PF02170135 PAZ: PAZ domain; InterPro: IPR003100 This domain i 97.43
cd02845117 PAZ_piwi_like PAZ domain, Piwi_like subfamily. In 97.33
cd02826393 Piwi-like Piwi-like: PIWI domain. Domain found in 97.3
KOG19241102 consensus RhoA GTPase effector DIA/Diaphanous [Sig 97.24
cd02846114 PAZ_argonaute_like PAZ domain, argonaute_like subf 97.22
cd04658448 Piwi_piwi-like_Euk Piwi_piwi-like_Euk: PIWI domain 97.01
PF02171302 Piwi: Piwi domain; InterPro: IPR003165 This domain 96.22
KOG4849498 consensus mRNA cleavage factor I subunit/CPSF subu 94.97
cd02844135 PAZ_CAF_like PAZ domain, CAF_like subfamily. CAF ( 92.29
cd02843122 PAZ_dicer_like PAZ domain, dicer_like subfamily. D 89.37
KOG0132894 consensus RNA polymerase II C-terminal domain-bind 88.69
KOG2236483 consensus Uncharacterized conserved protein [Funct 88.49
KOG1042845 consensus Germ-line stem cell division protein Hiw 87.55
PHA032473151 large tegument protein UL36; Provisional 84.89
KOG1923830 consensus Rac1 GTPase effector FRL [Signal transdu 84.19
PF12300180 DUF3628: Protein of unknown function (DUF3628); In 83.63
KOG3973465 consensus Uncharacterized conserved glycine-rich p 80.96
PHA032473151 large tegument protein UL36; Provisional 80.92
>PLN03202 protein argonaute; Provisional Back     alignment and domain information 
Probab=100.00  E-value=7.9e-43  Score=391.97  Aligned_cols=278  Identities=24%  Similarity=0.404  Sum_probs=217.4

Q ss_pred             cccCCCCCCCCCcceeEEEEeeEEEeeec-CCceeEEeEEEEecCCCCCCCCcccccHHHHHHHHHHHHhhCCCCCCCCc
Q 012649          121 TPIKRPDGGGTLAIRTVNIFVNHFPVNFT-PESTIRHYDIDVKPDIGPNHGRPVKLSKTVLAIVRNKLCEDYPDQFPLSM  199 (459)
Q Consensus       121 ~p~~RP~~Gt~~~G~~V~L~tN~F~l~~~-p~~~iy~YdV~i~p~~~~k~g~~~kl~r~i~~~i~~~Ll~~~~~~f~~~~  199 (459)
                      .+++|||||+.  |++|+|+||||+|++. +++.||||||+|+|+.+.. ...+++++.++.    +++++....+.+..
T Consensus        32 ~~~~RPg~Gt~--G~~i~l~aN~f~v~~~~~~~~ly~Y~V~i~p~~~~~-~~~~~~~~~i~~----~~~~~~~~~~~~~~  104 (900)
T PLN03202         32 LPMARRGFGSK--GQKIQLLTNHFKVSVNNPDGHFFHYSVSLTYEDGRP-VDGKGIGRKVID----KVQETYSSDLAGKD  104 (900)
T ss_pred             ccCCCCCCCCC--CCEEEEEeeEEEEeccCCCCcEEEEEEEeccCCCCc-ccchhhhHHHHH----HHHHhhHHhhCCCc
Confidence            56689999998  9999999999999975 5788999999999754211 001144455444    34433322344557


Q ss_pred             eEEcCCceEEeCccCCCc--eeEEEeccCC--------------------------CCceeEEEEEEEEeeeechHHHHH
Q 012649          200 TAYDGEKNIFSAIELPTG--KFNVEFPEGE--------------------------DMKYRTYVFTIKLVNELKLCKLKE  251 (459)
Q Consensus       200 ~ayDG~~~LyS~~~Lp~~--~~~V~l~~~~--------------------------~~~~~~~~V~Ik~~~~i~l~~L~~  251 (459)
                      +||||+++|||+.+|+.+  ++.|++...+                          ..+.+.|+|+|+++++|++++|.+
T Consensus       105 ~~~Dg~~~l~s~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~i~~~~L~~  184 (900)
T PLN03202        105 FAYDGEKSLFTVGALPQNKLEFTVVLEDVSSNRNNGNGSPVGNGSPNGGDRKRSRRPYQSKTFKVEISFAAKIPMQAIAN  184 (900)
T ss_pred             eeecCccceEECccCCCCCceEEEEecccccccccccccccccCCccccccccccccCCCceEEEEEEEccccCHHHHHH
Confidence            999999999999999854  4556553210                          013578999999999999999999


Q ss_pred             HhcCCCCCCChhhHHHHHHHHhcCCCC-cceecccccccCCCCCCCCCCCceEEeecceeeeeecccceEEEeeeeecee
Q 012649          252 YLTGSLFSIPRDILQGMDVVMKENPSR-RMISVGRSFHPVEPFPDDDLGYGLTASRGFQHGLKATSQGLALCLDYSVLAF  330 (459)
Q Consensus       252 ~l~g~~~~~~~~~iq~LnIIlr~~~~~-~~~~vGRsfF~~~~~~~~~l~~GlE~w~Gf~~SVR~~~ggL~LNvDvs~~~F  330 (459)
                      ||.+.....+.++||+||||||+.++. +++.+||+||........+++.|+|+|+||++|||+++++|+||+|++|++|
T Consensus       185 ~l~~~~~~~~~~~iq~lnivlr~~~~~~~~~~~gr~ff~~~~~~~~~l~~gle~~~G~~~Svr~~~~~l~LnvDvs~~~F  264 (900)
T PLN03202        185 ALRGQESENSQDALRVLDIILRQHAAKQGCLLVRQSFFHNDPKNFVDLGGGVLGCRGFHSSFRTTQGGLSLNIDVSTTMI  264 (900)
T ss_pred             HHcCCCCCCcHHHHHHHHHHHhhhhhhCCCceeccccCCCCCcccccCCCceEEeeeeeeEeeeccCceEEeeeeeeeee
Confidence            999988778899999999999999984 5899999999866434557899999999999999999999999999999999


Q ss_pred             ecCccHHHHHHHHhccCCCCCccHHHHHHHHhccccccccchhhhhhhcc---------cccccCC----------Ccce
Q 012649          331 RKRLPVIDFLQEHINFDVNGFRDWRKVENALKGLKHGFTSDQLQKLIYNM---------CFTFARC----------TKPV  391 (459)
Q Consensus       331 ~~~~~lld~i~e~~~~~~~~~~~~~~l~k~LkGl~v~~t~d~~~~lt~~l---------~~~f~r~----------t~~v  391 (459)
                      +++++|+|+|.++.+.......++.+++++|+|++|.++|.   +.+|++         ..+|...          ++.|
T Consensus       265 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~lkGl~V~t~~~---~k~yrI~~i~~~~a~~~~F~~~~~~~~~~~~~~~~i  341 (900)
T PLN03202        265 VQPGPVVDFLIANQNVRDPFQIDWSKAKRMLKNLRVKVSPS---NQEYKITGLSEKPCKEQTFSLKQRNGNGNEVETVEI  341 (900)
T ss_pred             ecCCcHHHHHHHhcCcCCccchhHHHHHHHhcCCEEEEecC---CceEEEeeccCCCCcceEEEcccCCcccccCCcceE
Confidence            99999999999986543221235778999999999998884   234432         2345422          3589


Q ss_pred             ecchhhhhHHHHHHHhhhh
Q 012649          392 SLVPPVYYADLVAYRGRLY  410 (459)
Q Consensus       392 Sv~~p~Yya~~y~~r~r~~  410 (459)
                      ||.  +||+.+|++++++.
T Consensus       342 Sv~--dYfk~~Yni~l~~p  358 (900)
T PLN03202        342 TVY--DYFVKHRGIELRYS  358 (900)
T ss_pred             EHH--HHHHHHcCccccCC
Confidence            999  99999999999963

>KOG1042 consensus Germ-line stem cell division protein Hiwi/Piwi; negative developmental regulator [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>KOG1041 consensus Translation initiation factor 2C (eIF-2C) and related proteins [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF08699 DUF1785: Domain of unknown function (DUF1785); InterPro: IPR014811 This region is found in argonaute [] proteins and often co-occurs with IPR003103 from INTERPRO and IPR003165 from INTERPRO Back     alignment and domain information
>PLN03202 protein argonaute; Provisional Back     alignment and domain information
>KOG1041 consensus Translation initiation factor 2C (eIF-2C) and related proteins [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd04657 Piwi_ago-like Piwi_ago-like: PIWI domain, Argonaute-like subfamily Back     alignment and domain information
>KOG1924 consensus RhoA GTPase effector DIA/Diaphanous [Signal transduction mechanisms; Cytoskeleton] Back     alignment and domain information
>cd02825 PAZ PAZ domain, named PAZ after the proteins Piwi Argonaut and Zwille Back     alignment and domain information
>PF02170 PAZ: PAZ domain; InterPro: IPR003100 This domain is named after the proteins Piwi Argonaut and Zwille Back     alignment and domain information
>cd02845 PAZ_piwi_like PAZ domain, Piwi_like subfamily Back     alignment and domain information
>cd02826 Piwi-like Piwi-like: PIWI domain Back     alignment and domain information
>KOG1924 consensus RhoA GTPase effector DIA/Diaphanous [Signal transduction mechanisms; Cytoskeleton] Back     alignment and domain information
>cd02846 PAZ_argonaute_like PAZ domain, argonaute_like subfamily Back     alignment and domain information
>cd04658 Piwi_piwi-like_Euk Piwi_piwi-like_Euk: PIWI domain, Piwi-like subfamily found in eukaryotes Back     alignment and domain information
>PF02171 Piwi: Piwi domain; InterPro: IPR003165 This domain is found in the stem cell self-renewal protein Piwi and its relatives in Drosophila melanogaster [] Back     alignment and domain information
>KOG4849 consensus mRNA cleavage factor I subunit/CPSF subunit [RNA processing and modification] Back     alignment and domain information
>cd02844 PAZ_CAF_like PAZ domain, CAF_like subfamily Back     alignment and domain information
>cd02843 PAZ_dicer_like PAZ domain, dicer_like subfamily Back     alignment and domain information
>KOG0132 consensus RNA polymerase II C-terminal domain-binding protein RA4, contains RPR and RRM domains [RNA processing and modification; Transcription] Back     alignment and domain information
>KOG2236 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>KOG1042 consensus Germ-line stem cell division protein Hiwi/Piwi; negative developmental regulator [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PHA03247 large tegument protein UL36; Provisional Back     alignment and domain information
>KOG1923 consensus Rac1 GTPase effector FRL [Signal transduction mechanisms; Cytoskeleton] Back     alignment and domain information
>PF12300 DUF3628: Protein of unknown function (DUF3628); InterPro: IPR022077 Proteins in this entry are DEAD Box RhlB RNA Helicases found in Xanthomonadaceae bacteria Back     alignment and domain information
>KOG3973 consensus Uncharacterized conserved glycine-rich protein [Function unknown] Back     alignment and domain information
>PHA03247 large tegument protein UL36; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query459
4ei1_A 859 Crystal Structure Of Human Argonaute2 Length = 859 4e-24
4ei1_A859 Crystal Structure Of Human Argonaute2 Length = 859 2e-08
4f3t_A 861 Human Argonaute-2 - Mir-20a Complex Length = 861 5e-24
4f3t_A861 Human Argonaute-2 - Mir-20a Complex Length = 861 2e-08
2yhb_A437 Crystal Structure Of The N. Crassa Qde-2 Ago Mid-Pi 9e-08
2yha_A388 Crystal Structure Of The N. Crassa Qde-2 Ago Mid-Pi 1e-07
4f1n_A1046 Crystal Structure Of Kluyveromyces Polysporus Argon 2e-05
>pdb|4EI1|A Chain A, Crystal Structure Of Human Argonaute2 Length = 859 Back     alignment and structure 
Iteration: 1

 Score =  108 bits (271), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 141/275 (51%), Gaps = 28/275 (10%)
Query: 120 YTPIKRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKTV 179
           + P  RPD G   + RT+ +  N F ++  P+  I HY++D+KP+  P      ++++ +
Sbjct: 23  FKPPPRPDFG--TSGRTIKLQANFFEMDI-PKIDIYHYELDIKPEKCPR-----RVNREI 74
Query: 180 LA-IVRNKLCEDYPDQFPLSMTAYDGEKNIFSAIELPTGKFNVEFP-----EGEDMKYRT 233
           +  +V++   + + D+ P+    +DG KN+++A+ LP G+  VE       EG+D   R 
Sbjct: 75  VEHMVQHFKTQIFGDRKPV----FDGRKNLYTAMPLPIGRDKVELEVTLPGEGKD---RI 127
Query: 234 YVFTIKLVNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRRMISVGRSFHPVEPF 293
           +  +IK V+ + L  L + L+G L S+P + +Q +DVVM+  PS R   VGRSF      
Sbjct: 128 FKVSIKWVSCVSLQALHDALSGRLPSVPFETIQALDVVMRHLPSMRYTPVGRSFFTASEG 187
Query: 294 PDDDLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHINF-----DV 348
             + LG G     GF   ++ +   + L +D S  AF K  PVI+F+ E ++F       
Sbjct: 188 CSNPLGGGREVWFGFHQSVRPSLWKMMLNIDVSATAFYKAQPVIEFVCEVLDFKSIEEQQ 247
Query: 349 NGFRDWRKVE--NALKGLKHGFTSDQLQKLIYNMC 381
               D ++V+    +KGLK   T     K  Y +C
Sbjct: 248 KPLTDSQRVKFTKEIKGLKVEITHCGQMKRKYRVC 282
>pdb|4EI1|A Chain A, Crystal Structure Of Human Argonaute2 Length = 859 Back     alignment and structure
>pdb|4F3T|A Chain A, Human Argonaute-2 - Mir-20a Complex Length = 861 Back     alignment and structure
>pdb|4F3T|A Chain A, Human Argonaute-2 - Mir-20a Complex Length = 861 Back     alignment and structure
>pdb|2YHB|A Chain A, Crystal Structure Of The N. Crassa Qde-2 Ago Mid-Piwi Domains Length = 437 Back     alignment and structure
>pdb|2YHA|A Chain A, Crystal Structure Of The N. Crassa Qde-2 Ago Mid-Piwi Domains Length = 388 Back     alignment and structure
>pdb|4F1N|A Chain A, Crystal Structure Of Kluyveromyces Polysporus Argonaute With A Guide Rna Length = 1046 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query459
4f3t_A 861 Protein argonaute-2; hydrolase/gene regulation, RN 100.0
4f1n_A 1046 Kpago; argonaute, RNAI, RNAse H, RNA binding prote 100.0
1u04_A 771 Argonaute, hypothetical protein PF0537; RNAI, sile 99.8
1yvu_A 706 Hypothetical protein AQ_1447; RNAse H fold, RNA bi 99.47
4f3t_A861 Protein argonaute-2; hydrolase/gene regulation, RN 99.19
4f1n_A1046 Kpago; argonaute, RNAI, RNAse H, RNA binding prote 99.17
2yha_A388 Post-transcriptional gene silencing protein QDE-2; 99.17
2yhb_A437 QDE-2, post-transcriptional gene silencing protein 99.08
3mj0_A124 Protein argonaute-2; argonaut, PAZ domain, 3'-END 97.85
3o7v_X124 PIWI-like protein 1; PIWI, RNA silencing, PI-RNA, 97.79
1vyn_A143 Argonaute2; nucleic acid binding, RNA interference 97.75
2xfm_A150 MIWI, PIWI-like protein 1; RNA-protein complex, di 97.72
3qir_A148 PIWI-like protein 2; structural genomics consortiu 97.71
3ho1_A 685 Argonaute; argonaute, protein-DNA-RNA complex, nuc 97.31
1r6z_P509 Chimera of maltose-binding periplasmic protein AN 97.09
1yvu_A706 Hypothetical protein AQ_1447; RNAse H fold, RNA bi 96.66
3ho1_A685 Argonaute; argonaute, protein-DNA-RNA complex, nuc 96.03
1u04_A771 Argonaute, hypothetical protein PF0537; RNAI, sile 95.4
2w42_A427 PIWI, putative uncharacterized protein; RNAI, RISC 94.13
>4f3t_A Protein argonaute-2; hydrolase/gene regulation, RNAI, slicer, hydrolase-RNA; 2.25A {Homo sapiens} PDB: 4ei1_A 4ei3_A* 1r4k_A 1si2_A 1si3_A Back     alignment and structure
Probab=100.00  E-value=2.2e-45  Score=410.85  Aligned_cols=282  Identities=30%  Similarity=0.471  Sum_probs=220.6

Q ss_pred             cccCCCCCCCCCcceeEEEEeeEEEeeecCCceeEEeEEEEecCCCCCCCCcccccHHHHHHHHHHHHhhC-CCCCCCCc
Q 012649          121 TPIKRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKTVLAIVRNKLCEDY-PDQFPLSM  199 (459)
Q Consensus       121 ~p~~RP~~Gt~~~G~~V~L~tN~F~l~~~p~~~iy~YdV~i~p~~~~k~g~~~kl~r~i~~~i~~~Ll~~~-~~~f~~~~  199 (459)
                      .+++|||+||.  |++|.|+||||+|++ +++.||||||+|+|+..++     +++|+    |+++|++++ .+.|++..
T Consensus        26 ~~p~RPg~Gt~--G~~i~l~aN~F~v~~-~~~~ly~Y~V~i~p~~~~~-----~~~r~----i~~~l~~~~~~~~~~~~~   93 (861)
T 4f3t_A           26 KPPPRPDFGTS--GRTIKLQANFFEMDI-PKIDIYHYELDIKPEKCPR-----RVNRE----IVEHMVQHFKTQIFGDRK   93 (861)
T ss_dssp             CCCBCCCCCCC--SEEEEEEESEEEEEC-CSCEEEEEEEEEESCSCCH-----HHHHH----HHHHHHHHSCCCCCTTCC
T ss_pred             cCCCCCCCCCC--CcEEEEEeeeEEEEC-CCCceeeeeEEeCCCcCcH-----HHHHH----HHHHHHHHhhhhhhcCce
Confidence            45589999998  999999999999998 6789999999999987654     55555    444555554 34576556


Q ss_pred             eEEcCCceEEeCccCCCc--eeEEEeccCCCCceeEEEEEEEEeeeechHHHHHHhcCCCCCCChhhHHHHHHHHhcCCC
Q 012649          200 TAYDGEKNIFSAIELPTG--KFNVEFPEGEDMKYRTYVFTIKLVNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPS  277 (459)
Q Consensus       200 ~ayDG~~~LyS~~~Lp~~--~~~V~l~~~~~~~~~~~~V~Ik~~~~i~l~~L~~~l~g~~~~~~~~~iq~LnIIlr~~~~  277 (459)
                      +||||+++|||+.+|+.+  .+++.+....+.+.+.|+|+|+++++|++++|.+||.|.....+.++||+||||||+.++
T Consensus        94 ~afDG~~~l~s~~~L~~~~~~~~~~v~~~~~~~~~~~~V~I~~~~~i~l~~L~~~l~g~~~~~~~~~iq~Lniilr~~~~  173 (861)
T 4f3t_A           94 PVFDGRKNLYTAMPLPIGRDKVELEVTLPGEGKDRIFKVSIKWVSCVSLQALHDALSGRLPSVPFETIQALDVVMRHLPS  173 (861)
T ss_dssp             CEECSSSEEEESSCCSCSSCEEEEECCC-------CEEEEEEEEEEEEHHHHHHHHHTCSSSCCHHHHHHHHHHHHHHHH
T ss_pred             EEEcCcceEEECCcCCCCCcceEEEEecCCCCCCcEEEEEEEEeeecCHHHHHHHhcCCCCCCcHHHHHHHHHHHHhhcc
Confidence            799999999999999853  233333222233567899999999999999999999998888889999999999999777


Q ss_pred             CcceecccccccCCCCCCCCCCCceEEeecceeeeeecccceEEEeeeeeceeecCccHHHHHHHHhccCCC-------C
Q 012649          278 RRMISVGRSFHPVEPFPDDDLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHINFDVN-------G  350 (459)
Q Consensus       278 ~~~~~vGRsfF~~~~~~~~~l~~GlE~w~Gf~~SVR~~~ggL~LNvDvs~~~F~~~~~lld~i~e~~~~~~~-------~  350 (459)
                      +++..+||+||++..+...++++|+|+|+||++|||+++++|+||+|++|++|+++++|+|+|.++++....       .
T Consensus       174 ~~~~~vGR~Ff~~~~~~~~~lg~Gle~w~G~~~Svr~~~~~l~LnvDvs~~~F~~~~~v~d~~~~~~~~~~~~~~~~~~~  253 (861)
T 4f3t_A          174 MRYTPVGRSFFTASEGCSNPLGGGREVWFGFHQSVRPSLWKMMLNIDVSATAFYKAQPVIEFVCEVLDFKSIEEQQKPLT  253 (861)
T ss_dssp             HHSEEETTEEECCC---CCEEETTEEEEEEEEEEEEECSSSEEEEEEEEEEEEECCEEHHHHHHHHHTCSSCC---CCCC
T ss_pred             ccccccCCCccCCCCCceeccCCCEEEEeceeEEEEecCCccEEeecccceeEeeCCcHHHHHHHHhcccchhhhccccC
Confidence            889999999999875444677899999999999999999999999999999999999999999999865321       1


Q ss_pred             CccHHHHHHHHhccccccccchhhhhhhcc-------cc--ccc---CCC--cceecchhhhhHHHHHHHhhhhhhhhhc
Q 012649          351 FRDWRKVENALKGLKHGFTSDQLQKLIYNM-------CF--TFA---RCT--KPVSLVPPVYYADLVAYRGRLYHEAVME  416 (459)
Q Consensus       351 ~~~~~~l~k~LkGl~v~~t~d~~~~lt~~l-------~~--~f~---r~t--~~vSv~~p~Yya~~y~~r~r~~~~~~~~  416 (459)
                      ..++.+++++|+|++|.++|...++.+|++       +.  +|.   ..+  +.|||+  +||+++|++++++..++...
T Consensus       254 ~~~~~~~~k~LkGl~V~~t~~~~~~r~yrI~~i~~~pa~~~~F~~~~~~g~~~~iSV~--dYFk~kYni~L~~p~lPll~  331 (861)
T 4f3t_A          254 DSQRVKFTKEIKGLKVEITHCGQMKRKYRVCNVTRRPASHQTFPLQQESGQTVECTVA--QYFKDRHKLVLRYPHLPCLQ  331 (861)
T ss_dssp             HHHHHHHHHHHTTCEEEESCC---CCEEEEEEEEEEETTTCEEEEECSSSCEEEEEHH--HHHHHHHCCCCSCTTSEEEE
T ss_pred             HHHHHHHHHHhCCcEEEEeecCCCCceEEEeeCCCCCCCCcEEEeecCCCCceeEEHH--HHHHHhcCcccCCCCCceEE
Confidence            234679999999999988874323344532       11  253   223  379999  99999999999987777543
>4f1n_A Kpago; argonaute, RNAI, RNAse H, RNA binding protein-RNA complex; 3.19A {Vanderwaltozyma polyspora} Back     alignment and structure
>1u04_A Argonaute, hypothetical protein PF0537; RNAI, silencing, PIWI, PAZ, RISC, slicer, RNAse H hydrolase-gene regulation complex; 2.25A {Pyrococcus furiosus} SCOP: b.34.14.1 c.55.3.10 PDB: 1z25_A 1z26_A Back     alignment and structure
>1yvu_A Hypothetical protein AQ_1447; RNAse H fold, RNA binding protein, gene regulation; 2.90A {Aquifex aeolicus} SCOP: b.34.14.1 c.55.3.10 PDB: 2f8s_A 2f8t_A 2nub_A Back     alignment and structure
>4f3t_A Protein argonaute-2; hydrolase/gene regulation, RNAI, slicer, hydrolase-RNA; 2.25A {Homo sapiens} PDB: 4ei1_A 4ei3_A* 1r4k_A 1si2_A 1si3_A Back     alignment and structure
>4f1n_A Kpago; argonaute, RNAI, RNAse H, RNA binding protein-RNA complex; 3.19A {Vanderwaltozyma polyspora} Back     alignment and structure
>2yha_A Post-transcriptional gene silencing protein QDE-2; RNA binding protein, argonaute, miRNA, siRNA; HET: GOL; 1.85A {Neurospora crassa} PDB: 2xdy_A Back     alignment and structure
>2yhb_A QDE-2, post-transcriptional gene silencing protein QDE-2; RNA binding protein, argonaute, miRNA, siRNA; 3.65A {Neurospora crassa} Back     alignment and structure
>3mj0_A Protein argonaute-2; argonaut, PAZ domain, 3'-END 2'-O-methylated ssRNA, RNA-RNA protein complex; HET: OMU; 2.31A {Drosophila melanogaster} SCOP: b.34.14.1 PDB: 1t2r_A 1t2s_A Back     alignment and structure
>3o7v_X PIWI-like protein 1; PIWI, RNA silencing, PI-RNA, HIWI1, HILI, PAZ domain, RNA BI protein; HET: OMU; 2.10A {Homo sapiens} PDB: 2l5c_A 2l5d_A 3o3i_X 3o6e_X* Back     alignment and structure
>2xfm_A MIWI, PIWI-like protein 1; RNA-protein complex, differentiation, RNA interference; HET: OMU; NMR {Mus musculus} Back     alignment and structure
>3qir_A PIWI-like protein 2; structural genomics consortium, SGC, PAZ domain, RNAI, RNA B RNA binding protein; 2.45A {Homo sapiens} PDB: 3o7x_A Back     alignment and structure
>3ho1_A Argonaute; argonaute, protein-DNA-RNA complex, nucleic acid binding Pro RNA complex; 2.60A {Thermus thermophilus} PDB: 3dlb_A* 3dlh_A* 3f73_A* 3hm9_A 3hvr_A 3hxm_A* 3hk2_A 3hjf_A Back     alignment and structure
>1r6z_P Chimera of maltose-binding periplasmic protein AN argonaute 2; deviant OB fold, RNAI, gene regulation; HET: MAL; 2.80A {Escherichia coli} SCOP: b.34.14.1 c.94.1.1 Back     alignment and structure
>1yvu_A Hypothetical protein AQ_1447; RNAse H fold, RNA binding protein, gene regulation; 2.90A {Aquifex aeolicus} SCOP: b.34.14.1 c.55.3.10 PDB: 2f8s_A 2f8t_A 2nub_A Back     alignment and structure
>3ho1_A Argonaute; argonaute, protein-DNA-RNA complex, nucleic acid binding Pro RNA complex; 2.60A {Thermus thermophilus} PDB: 3dlb_A* 3dlh_A* 3f73_A* 3hm9_A 3hvr_A 3hxm_A* 3hk2_A 3hjf_A Back     alignment and structure
>1u04_A Argonaute, hypothetical protein PF0537; RNAI, silencing, PIWI, PAZ, RISC, slicer, RNAse H hydrolase-gene regulation complex; 2.25A {Pyrococcus furiosus} SCOP: b.34.14.1 c.55.3.10 PDB: 1z25_A 1z26_A Back     alignment and structure
>2w42_A PIWI, putative uncharacterized protein; RNAI, RISC, argonaute, PIWI domain, protein/DNA complex; 1.90A {Archaeoglobus fulgidus} PDB: 1ytu_A 2bgg_A 1w9h_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 459
d1yvua2392 c.55.3.10 (A:315-706) Argonaute homologue Aq_1447 8e-14
d1w9ha1316 c.55.3.10 (A:93-408) Hypothetical protein AF1318 { 5e-11
d1u04a2447 c.55.3.10 (A:324-770) Argonaute homologue PF0537 { 3e-07
d1t2sa_123 b.34.14.1 (A:) Argonaute 2 {Fruit fly (Drosophila 4e-04
>d1yvua2 c.55.3.10 (A:315-706) Argonaute homologue Aq_1447 {Aquifex aeolicus [TaxId: 63363]} Length = 392 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Ribonuclease H-like
family: PIWI domain
domain: Argonaute homologue Aq 1447
species: Aquifex aeolicus [TaxId: 63363]

 Score = 70.3 bits (172), Expect = 8e-14
 Identities = 8/46 (17%), Positives = 18/46 (39%)

Query: 371 DQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYHEAVME 416
           + L   I ++        +P+ L   V+Y+D +        E + +
Sbjct: 339 EVLCSQILSLTLMNYSSFQPIKLPATVHYSDKITKLMLRGIEPIKK 384
>d1w9ha1 c.55.3.10 (A:93-408) Hypothetical protein AF1318 {Archaeoglobus fulgidus [TaxId: 2234]} Length = 316 Back     information, alignment and structure
>d1u04a2 c.55.3.10 (A:324-770) Argonaute homologue PF0537 {Pyrococcus furiosus [TaxId: 2261]} Length = 447 Back     information, alignment and structure
>d1t2sa_ b.34.14.1 (A:) Argonaute 2 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 123 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query459
d1u04a1322 Argonaute homologue PF0537 {Pyrococcus furiosus [T 99.96
d1si2a_126 Eukaryotic translation initiation factor 2C 1, EIF 97.86
d1t2sa_123 Argonaute 2 {Fruit fly (Drosophila melanogaster) [ 97.68
d1yvua2392 Argonaute homologue Aq_1447 {Aquifex aeolicus [Tax 96.01
d1u04a2447 Argonaute homologue PF0537 {Pyrococcus furiosus [T 95.93
d1w9ha1316 Hypothetical protein AF1318 {Archaeoglobus fulgidu 94.69
>d1u04a1 b.34.14.1 (A:2-323) Argonaute homologue PF0537 {Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
class: All beta proteins
fold: SH3-like barrel
superfamily: PAZ domain
family: PAZ domain
domain: Argonaute homologue PF0537
species: Pyrococcus furiosus [TaxId: 2261]

Probab=99.96  E-value=4.2e-31  Score=257.68  Aligned_cols=220  Identities=9%  Similarity=-0.043  Sum_probs=151.9

Q ss_pred             eEEEEeeEEEeeec--CCceeEEeEEEEecCCCCCCCCcccccHHHHHHHHHHHHhhCCCCCCCCceEEcCCceEEeCcc
Q 012649          136 TVNIFVNHFPVNFT--PESTIRHYDIDVKPDIGPNHGRPVKLSKTVLAIVRNKLCEDYPDQFPLSMTAYDGEKNIFSAIE  213 (459)
Q Consensus       136 ~V~L~tN~F~l~~~--p~~~iy~YdV~i~p~~~~k~g~~~kl~r~i~~~i~~~Ll~~~~~~f~~~~~ayDG~~~LyS~~~  213 (459)
                      ++.+.+|+|+|+.+  |+ .||||+|+|+|+++++     +++.        .|+++|.+.+ |..++|||. .||++++
T Consensus         1 ~~~~~~N~~ki~~~~~p~-~lyqYrV~f~P~~e~~-----~~r~--------~ll~~h~~~~-G~~~~fDg~-~l~~~kk   64 (322)
T d1u04a1           1 KAIVVINLVKINKKIIPD-KIYVYRLFNDPEEELQ-----KEGY--------SIYRLAYENV-GIVIDPENL-IIATTKE   64 (322)
T ss_dssp             EEEEEBSEEEBCGGGSCS-CEEEEEC-----------------C--------CHHHHHHHTT-EEEEETTTT-EEEESSC
T ss_pred             CeEEEEEEEEeecccCCc-eeEEEEecCCChhhhH-----HHHH--------HHHHHHHHhc-CeEEecCCc-EEecccc
Confidence            57899999999654  65 7999999999999875     3322        2333433344 567889995 7999999


Q ss_pred             CCCceeEEEeccCCCCceeEEEEEEEEeeeechHHHHHHhcCCCCCCChhhHHHHHHHHhcCCC-CcceecccccccCCC
Q 012649          214 LPTGKFNVEFPEGEDMKYRTYVFTIKLVNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPS-RRMISVGRSFHPVEP  292 (459)
Q Consensus       214 Lp~~~~~V~l~~~~~~~~~~~~V~Ik~~~~i~l~~L~~~l~g~~~~~~~~~iq~LnIIlr~~~~-~~~~~vGRsfF~~~~  292 (459)
                      |+...   +           +.++++.+.+...             .+.+++|++|+++|+++. +++..|||+||++..
T Consensus        65 L~~~~---e-----------~~~~~~~~~~~~~-------------~~~~~~q~~Nil~r~~m~~l~l~~iGRnyydp~~  117 (322)
T d1u04a1          65 LEYEG---E-----------FIPEGEISFSELR-------------NDYQSKLVLRLLKENGIGEYELSKLLRKFRKPKT  117 (322)
T ss_dssp             CCCSS---C-----------CEEEEEECGGGSC-------------HHHHHHHHHHHHHHTTCSHHHHHHHHTTTSCCEE
T ss_pred             cCcce---e-----------EEEEEEEEcccCC-------------CcHHHHHHHHHHHHHHhhhcceeeeccccCCCCC
Confidence            98641   1           2234554443332             257799999999999999 799999999999874


Q ss_pred             CCCCCCCCceEEeecceeeeeecccceEEEeeeeeceeecCccHHHHHHHHhccCCC-------C-CccHHHHHHHHhcc
Q 012649          293 FPDDDLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHINFDVN-------G-FRDWRKVENALKGL  364 (459)
Q Consensus       293 ~~~~~l~~GlE~w~Gf~~SVR~~~ggL~LNvDvs~~~F~~~~~lld~i~e~~~~~~~-------~-~~~~~~l~k~LkGl  364 (459)
                            .+.+|+|+||.+||++++++++||+|++|++++ .+||+|+|.++.+...+       . ......+.+.|.|.
T Consensus       118 ------~~~levwPGy~TSI~q~E~~ilLc~disHKVmR-~~Tvld~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~lvG~  190 (322)
T d1u04a1         118 ------FGDYKVIPSVEMSVIKHDEDFYLVIHIIHQIQS-MKTLWELVNKDPKELEEFLMTHKENLMLKDIASPLKTVYK  190 (322)
T ss_dssp             ------ETTEEEEEEEEEEEEECSSCEEEEEEEEEEEEE-SSCHHHHTTTCHHHHHHHHHHSTTTCEEEETTSTTCCEEE
T ss_pred             ------ccceEEcCCeeeeehhhcCceEEEEEeeeeEee-hhhHHHHHHHHHHhhhhhhhhhhhhhHHHHhhhhhheece
Confidence                  357999999999999999999999999999999 47999999776543210       0 01124567778999


Q ss_pred             ccccccchhhhhhh------------cccccccCCCcceecchhhhhHHHHHHHhhhhhhhh
Q 012649          365 KHGFTSDQLQKLIY------------NMCFTFARCTKPVSLVPPVYYADLVAYRGRLYHEAV  414 (459)
Q Consensus       365 ~v~~t~d~~~~lt~------------~l~~~f~r~t~~vSv~~p~Yya~~y~~r~r~~~~~~  414 (459)
                      .|.++|   ++.||            +...+|...+ .+|++  +||+..|++   |..|+.
T Consensus       191 iVLT~Y---NNkTy~~di~~dvd~~~~p~~t~~~~~-~~s~i--eYYk~~Yni---D~~QPl  243 (322)
T d1u04a1         191 PCFEEY---TKKPKLDHNQEIVKYWYNYHIERYWNT-PEAKL--EFYRKFGQV---DLKQPA  243 (322)
T ss_dssp             ECBCTT---SSCBCEECCHHHHHHHHHHHHHHHCCS-HHHHH--HHHHHHCSC---CTTSCE
T ss_pred             EEEecc---CCcceecchhhcCCcccCccceeccCC-cccHH--HHHHHhcCC---CCCCce
Confidence            997776   22222            2333454344 67999  999999998   444554
>d1si2a_ b.34.14.1 (A:) Eukaryotic translation initiation factor 2C 1, EIF2C1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1t2sa_ b.34.14.1 (A:) Argonaute 2 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1yvua2 c.55.3.10 (A:315-706) Argonaute homologue Aq_1447 {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1u04a2 c.55.3.10 (A:324-770) Argonaute homologue PF0537 {Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1w9ha1 c.55.3.10 (A:93-408) Hypothetical protein AF1318 {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure