Citrus Sinensis ID: 012763

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------
Protein Sequence
MASWVLSECGLKPLPHIFPRPRTGINPSKARFLHSKKSITDLKLPSVKCSGDFSRDRNWGLKVSAPLRVAPLEGEDEEERINGVNGIGNNKGVEEEEGSEFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYVVRDVVVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKKSGPIPFNLFGDLIRSMSKDHYVSDNGDVVYYQTDPQLNGSSKSG
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccccccHHHHHHcccccccccccccccccccccccccccccHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccccccccccccccccccccccEEEHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHccccEEEcccccEEEcccccccccccccc
Secondary Structure Prediction (SSPRO)
cccEEHHHcccccccccccccccccccccccccccccccccccccccccccccccccccEEEEccccEccccccccccccccccccccccccccccccccccccccccccHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHccHHHHHHHHHEHcccccEEEccccccccccccccccccccccHHHHHHccccccEEEEEEccHHccccEEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHcHHHHHcccHcHHHHcccccccHHHHHcccccccHHHHHHHHHHcHHHcHHcccccccccccHHHHHHHHHHHHHcEEEcccccEEEEEcccccccccccc
Coil and Loop (DISEMBL)
maswvlsecglkplphifprprtginpskarflhskksitdlklpsvkcsgdfsrdrnwglkvsaplrvaplegedeeeringvngignnkgveeeegsefdpgapppfkladiraaipkhcwvkdpwksmsyVVRDVVVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLghdcghgsfsndhklNSVVGHLLHSsilvpyhgwrishrthhqnhghvendeswhplsEKIYRTLDSATRFlrfkipfpllaypfylwsrspgktgshfdpnsdlfvpserkdviTSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHhhghedklpwyrgkewsylrgglttldrdygwfnnihhdigthvihhlfpqiphyhlieateaarpvlgkyyrepkksgpipfnlFGDLIRSmskdhyvsdngdvvyyqtdpqlngssksg
Flexible Loop (DISEMBL)
maswvlsecglkplphifprprtginpSKARFLhskksitdlklpsvkcsgdfsrdrnwglkvsaplrvaplegedeeeringvngignnKGVEEEEGSEFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYVVRDVVVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHvendeswhplSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYrepkksgpiPFNLFGDLIRSMSKDHYVSDNGDVVYYQtdpqlngssksg
Low Complexity Region (SEG)
MASWVLSECGLKPLPHIFPRPRTGINPSKARFLHSKKSITDLKLPSVKCSGDFSRDRNWGLKVSAPLRVAPLEGEDeeeringvngignnkgveeeegseFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYvvrdvvvvfglaaaaaylnnwvvwPLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKKSGPIPFNLFGDLIRSMSKDHYVSDNGDVVYYQTDPQLNGSSKSG
Disordered region (IsUnstruct)
***WVLSECGLKPLPHIFP**********************LKLPSVKCSGDFSRDRNWGLKVS*********************************************KLADIRAAIPKHCWVKDPWKSMSYVVRDVVVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSR**************LFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKKSGPIPFNLFGDLIRSMSKDHYVSDNGDVVYYQ************
Disordered Region (DISOPRED)
*ASWVLSECGLKPLPHI******************************************************************************************PFKLADIRAAIPKHCWVKDPWKSMSYVVRDVVVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKKSGPIPFNLFGDLIRSMSKDHYVSDNGDVVYYQT***********
Disordered Region (DISEMBL)
MASWVLSECGLKPLPHIFPRPRTGINPSKARFLHSKKSITDLKLPSVKCSGDFSRDRNWGLKVSAPLRVAPLEGEDEEERINGVNGIGNNKG***********GAPPPFKLADIRAAIPKHCWVKDPWKSMSYVVRDVVVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKKSGPIPFNLFGDLIRSMSKDHYVSDNGDVVYYQTDPQ********
Disordered Region (DISPRO)
**SWVLSECGLKPLPHIFPRPR********RF*******TDLKLPSVKCSGDFSRDRNWGLKVSAPLRVAP*****************************FDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYVVRDVVVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKKSGPIPFNLFGDLIRSMSKDHYVSDNGDVVYYQTD**********
Transmembrane Helix (TMHMM)
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Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASWVLSECGLKPLPHIFPRPRTGINPSKARFLHSKKSITDLKLPSVKCSGDFSRDRNWGLKVSAPLRVAPLEGEDEEERINGVNGIGNNKGVEEEEGSEFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYVVRDVVVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKKSGPIPFNLFGDLIRSMSKDHYVSDNGDVVYYQTDPQLNGSSKSG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	457	2.2.26 [Sep-21-2011]
P48620	447	Omega-3 fatty acid desatu	N/A	no	0.962	0.984	0.779	0.0
P48619	460	Omega-3 fatty acid desatu	N/A	no	0.975	0.969	0.752	0.0
P48621	453	Omega-3 fatty acid desatu	no	no	0.978	0.986	0.764	0.0
P48622	435	Temperature-sensitive ome	yes	no	0.936	0.983	0.716	0.0
P46310	446	Omega-3 fatty acid desatu	no	no	0.960	0.984	0.711	0.0
P48618	404	Omega-3 fatty acid desatu	N/A	no	0.840	0.950	0.756	0.0
P48626	379	Omega-3 fatty acid desatu	N/A	no	0.811	0.978	0.712	1e-161
P32291	380	Omega-3 fatty acid desatu	N/A	no	0.796	0.957	0.719	1e-159
P48625	380	Omega-3 fatty acid desatu	no	no	0.805	0.968	0.706	1e-156
P48624	383	Omega-3 fatty acid desatu	N/A	no	0.803	0.958	0.698	1e-155

>sp|P48620|FAD3C_SESIN Omega-3 fatty acid desaturase, chloroplastic OS=Sesamum indicum GN=FAD7 PE=2 SV=1

 Score =  718 bits (1854), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/463 (77%), Positives = 391/463 (84%), Gaps = 23/463 (4%)

Query: 1   MASWVLSECGLKPLPHIFPRPRTG-----INPSKARFLHSKKSITDLKLPSVKC-SGDFS 54
           MASWVLSECGL+PLP ++P+PRTG      NP+K RF     S TDL   S  C S    
Sbjct: 1   MASWVLSECGLRPLPRVYPKPRTGHPLLNSNPTKLRF-----SRTDLGNGSSFCLSSGIL 55

Query: 55  RDRNWGLKVSAPLRVAPLEGEDEEERINGV-NGIGNNKGVEEEEGSEFDPGAPPPFKLAD 113
           R++NW L+VSAPLRV  +E E+E +    V NG           G EFDPGAPPPFKL+D
Sbjct: 56  REKNWALRVSAPLRVLQVEEEEENKEGERVING-----------GEEFDPGAPPPFKLSD 104

Query: 114 IRAAIPKHCWVKDPWKSMSYVVRDVVVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFV 173
           IR AIPKHCWVKDPW+SM YVVRDV VVFGLAA AAY NNWVVWPLYW AQ TMFWALFV
Sbjct: 105 IREAIPKHCWVKDPWRSMGYVVRDVAVVFGLAAVAAYFNNWVVWPLYWFAQSTMFWALFV 164

Query: 174 LGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSE 233
           LGHDCGHGSFSND KLNSVVGH+LHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSE
Sbjct: 165 LGHDCGHGSFSNDPKLNSVVGHILHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSE 224

Query: 234 KIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTV 293
           KIY+ LD+AT+ LRF +PFPLLAYP YLWSRSPGK GSHF P+SDLFVP+E+KDVITSTV
Sbjct: 225 KIYKNLDTATKKLRFTLPFPLLAYPIYLWSRSPGKQGSHFHPDSDLFVPNEKKDVITSTV 284

Query: 294 CWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWS 353
           CWTAM ALLVGLSFV+GP+QLLKLYG+PY   VMWLDLVTYLHHHGHEDKLPWYRGKEWS
Sbjct: 285 CWTAMLALLVGLSFVIGPVQLLKLYGIPYLGNVMWLDLVTYLHHHGHEDKLPWYRGKEWS 344

Query: 354 YLRGGLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKK 413
           YLRGGLTTLDRDYGW NNIHHDIGTHVIHHLFPQIPHYHLIEATEAA+PVLGKYYREPKK
Sbjct: 345 YLRGGLTTLDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLIEATEAAKPVLGKYYREPKK 404

Query: 414 SGPIPFNLFGDLIRSMSKDHYVSDNGDVVYYQTDPQLNGSSKS 456
           S P+PF+L GDL RS+ +DHYVSD GDVVYYQTDPQL G+ KS
Sbjct: 405 SAPLPFHLLGDLTRSLKRDHYVSDVGDVVYYQTDPQLTGAEKS 447

Chloroplast omega-3 fatty acid desaturase introduces the third double bond in the biosynthesis of 16:3 and 18:3 fatty acids, important constituents of plant membranes. It is thought to use ferredoxin as an electron donor and to act on fatty acids esterified to galactolipids, sulfolipids and phosphatidylglycerol.
Sesamum indicum (taxid: 4182)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 9EC: .EC: -

>sp|P48619|FAD3C_RICCO Omega-3 fatty acid desaturase, chloroplastic OS=Ricinus communis GN=FAD7A-1 PE=2 SV=1

 Score =  709 bits (1829), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/456 (75%), Positives = 381/456 (83%), Gaps = 10/456 (2%)

Query: 2   ASWVLSECGLKPLPHIFPRPRTGINPSKARFLHSKKSITDLK----LPSVKCSG-DFSRD 56
           A WVLSECGL+PLP I+ RPR G   SK   L   + + D K      S K S    S+ 
Sbjct: 3   AGWVLSECGLRPLPRIYSRPRIGFT-SKTTNLLKLRELPDSKSYNLCSSFKVSSWSNSKQ 61

Query: 57  RNWGLKVSAPLRVAPLEGEDEEERINGVNGIGNNKGVEEEEGSEFDPGAPPPFKLADIRA 116
            NW L V+ P+ V+ + GED+ ER    NGI N   V+E +G  FD GAPPPF LADIRA
Sbjct: 62  SNWALNVAVPVNVSTVSGEDDRER-EEFNGIVN---VDEGKGEFFDAGAPPPFTLADIRA 117

Query: 117 AIPKHCWVKDPWKSMSYVVRDVVVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGH 176
           AIPKHCWVK+PW+SMSYV+RDVVVVFGLAA AAY NNWV WPLYW  QGTMFWALFVLGH
Sbjct: 118 AIPKHCWVKNPWRSMSYVLRDVVVVFGLAAVAAYFNNWVAWPLYWFCQGTMFWALFVLGH 177

Query: 177 DCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIY 236
           DCGHGSFSN+ KLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKI+
Sbjct: 178 DCGHGSFSNNPKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIF 237

Query: 237 RTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWT 296
           ++LD+ T+ LRF +PFP+LAYPFYLWSRSPGK GSHF P+S LFVP ERKD+ITST CWT
Sbjct: 238 KSLDNVTKTLRFSLPFPMLAYPFYLWSRSPGKKGSHFHPDSGLFVPKERKDIITSTACWT 297

Query: 297 AMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLR 356
           AMAALLV L+F MGP+Q+LKLYG+PYWIFVMWLD VTYLHHHGHEDKLPWYRGK WSYLR
Sbjct: 298 AMAALLVYLNFSMGPVQMLKLYGIPYWIFVMWLDFVTYLHHHGHEDKLPWYRGKAWSYLR 357

Query: 357 GGLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKKSGP 416
           GGLTTLDRDYGW NNIHHDIGTHVIHHLFPQIPHYHL+EATEAA+PV+GKYYREPKKSGP
Sbjct: 358 GGLTTLDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVMGKYYREPKKSGP 417

Query: 417 IPFNLFGDLIRSMSKDHYVSDNGDVVYYQTDPQLNG 452
           +P +L G L+RSM +DHYVSD GDVVYYQ DP+L+G
Sbjct: 418 LPLHLLGSLVRSMKEDHYVSDTGDVVYYQKDPKLSG 453

Chloroplast omega-3 fatty acid desaturase introduces the third double bond in the biosynthesis of 16:3 and 18:3 fatty acids, important constituents of plant membranes. It is thought to use ferredoxin as an electron donor and to act on fatty acids esterified to galactolipids, sulfolipids and phosphatidylglycerol.

Ricinus communis (taxid: 3988)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 9

EC: .

EC: -

>sp|P48621|FAD3C_SOYBN Omega-3 fatty acid desaturase, chloroplastic OS=Glycine max GN=FAD7 PE=2 SV=1

 Score =  692 bits (1787), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/459 (76%), Positives = 393/459 (85%), Gaps = 12/459 (2%)

Query: 1   MASWVLSECGLKPLPHIFPRPRTGI---NPSKARFLHSKKSITDLKLPSVKCSGDFSRDR 57
           MA+W   +CGLKPL  + PRPRTG    + S+  FL + K +   K   ++C+    R+R
Sbjct: 1   MATWYHQKCGLKPLAPVIPRPRTGAALSSTSRVEFLDTNKVVAGPKFQPLRCN---LRER 57

Query: 58  NWGLKVSAPLRVAPLEGEDEEERINGVNGIGNNKGVEEEEGSEFDPGAPPPFKLADIRAA 117
           NWGLKVSAPLRVA +E  +E++ ++  NG     GVE E+  EFDPGAPPPF LADIRAA
Sbjct: 58  NWGLKVSAPLRVASIE--EEQKSVDLTNG---TNGVEHEKLPEFDPGAPPPFNLADIRAA 112

Query: 118 IPKHCWVKDPWKSMSYVVRDVVVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGHD 177
           IPKHCWVKDPW+SMSYVVRDV+ VFGLAAAAAYLNNW+VWPLYWAAQGTMFWALFVLGHD
Sbjct: 113 IPKHCWVKDPWRSMSYVVRDVIAVFGLAAAAAYLNNWLVWPLYWAAQGTMFWALFVLGHD 172

Query: 178 CGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYR 237
           CGHGSFSN+ KLNSVVGHLLHSSILVPYHGWRISHRTHHQ+HGH ENDESWHPL EK++R
Sbjct: 173 CGHGSFSNNSKLNSVVGHLLHSSILVPYHGWRISHRTHHQHHGHAENDESWHPLPEKLFR 232

Query: 238 TLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTA 297
           +LD+ TR LRF  PFPLLA+P YL+SRSPGKTGSHFDP+SDLFVP+ERKDVITST CW A
Sbjct: 233 SLDTVTRMLRFTAPFPLLAFPVYLFSRSPGKTGSHFDPSSDLFVPNERKDVITSTACWAA 292

Query: 298 MAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRG 357
           M  LLVGL FVMGP+QLLKLYG+PY IFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRG
Sbjct: 293 MLGLLVGLGFVMGPIQLLKLYGVPYVIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRG 352

Query: 358 GLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKKS-GP 416
           GLTTLDRDYGW NNIHHDIGTHVIHHLFPQIPHYHL+EATEAA+PV GKYYREPKKS  P
Sbjct: 353 GLTTLDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVFGKYYREPKKSAAP 412

Query: 417 IPFNLFGDLIRSMSKDHYVSDNGDVVYYQTDPQLNGSSK 455
           +PF+L G++IRS   DH+VSD GDVVYYQTD ++NGSSK
Sbjct: 413 LPFHLIGEIIRSFKTDHFVSDTGDVVYYQTDSKINGSSK 451

Chloroplast omega-3 fatty acid desaturase introduces the third double bond in the biosynthesis of 16:3 and 18:3 fatty acids, important constituents of plant membranes. It is thought to use ferredoxin as an electron donor and to act on fatty acids esterified to galactolipids, sulfolipids and phosphatidylglycerol.

Glycine max (taxid: 3847)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 9

EC: .

EC: -

>sp|P48622|FAD3D_ARATH Temperature-sensitive omega-3 fatty acid desaturase, chloroplastic OS=Arabidopsis thaliana GN=FAD8 PE=2 SV=1

 Score =  675 bits (1742), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/458 (71%), Positives = 366/458 (79%), Gaps = 30/458 (6%)

Query: 1   MASWVLSECGLKPLPHIFPRPRTGI--NPSKARFLHSKKSITDLKLPSVKCS---GDFSR 55
           MAS VLSECG +PLP  +P+  T    NP K  F    K    LK PS   +   G +S+
Sbjct: 1   MASSVLSECGFRPLPRFYPKHTTSFASNP-KPTF----KFNPPLKPPSSLLNSRYGFYSK 55

Query: 56  DRNWGLKVSAPLRVAPLEGEDEEERINGVNGIGNNKGVEEEEGSEFDPGAPPPFKLADIR 115
            RNW L V+ PL       E++ ER                    FDPGAPPPF LADIR
Sbjct: 56  TRNWALNVATPLTTLQSPSEEDTER--------------------FDPGAPPPFNLADIR 95

Query: 116 AAIPKHCWVKDPWKSMSYVVRDVVVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLG 175
           AAIPKHCWVK+PW SMSYVVRDV +VFGLAA AAY NNW++WPLYW AQGTMFWALFVLG
Sbjct: 96  AAIPKHCWVKNPWMSMSYVVRDVAIVFGLAAVAAYFNNWLLWPLYWFAQGTMFWALFVLG 155

Query: 176 HDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKI 235
           HDCGHGSFSND +LNSV GHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPL E I
Sbjct: 156 HDCGHGSFSNDPRLNSVAGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPESI 215

Query: 236 YRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCW 295
           Y+ L+  T+  RF +PFP+LAYPFYLW+RSPGK GSH+ P+SDLF+P E+KDV+TST CW
Sbjct: 216 YKNLEKTTQMFRFTLPFPMLAYPFYLWNRSPGKQGSHYHPDSDLFLPKEKKDVLTSTACW 275

Query: 296 TAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYL 355
           TAMAALLV L+FVMGP+Q+LKLYG+PYWIFVMWLD VTYLHHHGHEDKLPWYRGKEWSYL
Sbjct: 276 TAMAALLVCLNFVMGPIQMLKLYGIPYWIFVMWLDFVTYLHHHGHEDKLPWYRGKEWSYL 335

Query: 356 RGGLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKKSG 415
           RGGLTTLDRDYGW NNIHHDIGTHVIHHLFPQIPHYHL+EATEAA+PVLGKYYREPK SG
Sbjct: 336 RGGLTTLDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYREPKNSG 395

Query: 416 PIPFNLFGDLIRSMSKDHYVSDNGDVVYYQTDPQLNGS 453
           P+P +L G LI+SM +DH+VSD GDVVYY+ DP+LNG 
Sbjct: 396 PLPLHLLGSLIKSMKQDHFVSDTGDVVYYEADPKLNGQ 433

Chloroplast omega-3 fatty acid desaturase introduces the third double bond in the biosynthesis of 16:3 and 18:3 fatty acids, important constituents of plant membranes. It is thought to use ferredoxin as an electron donor and to act on fatty acids esterified to galactolipids, sulfolipids and phosphatidylglycerol.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 9

EC: .

EC: -

>sp|P46310|FAD3C_ARATH Omega-3 fatty acid desaturase, chloroplastic OS=Arabidopsis thaliana GN=FAD7 PE=1 SV=1

 Score =  665 bits (1716), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/458 (71%), Positives = 362/458 (79%), Gaps = 19/458 (4%)

Query: 1   MASWVLSECGLKPLPHIFPRPRTGINPSKARFLHSKKSITDLKLPSVKCSGDFSRD---R 57
           MA+ VLSECG++PLP I+  PR+    +  +F  S  S +     S    G  SRD   R
Sbjct: 1   MANLVLSECGIRPLPRIYTTPRSNFLSNNNKFRPSLSSSSYKTSSSPLSFGLNSRDGFTR 60

Query: 58  NWGLKVSAPLRVAPLEGEDEEERINGVNGIGNNKGVEEEEGSEFDPGAPPPFKLADIRAA 117
           NW L VS PL     E                   +EE+    FDPGAPPPF LADIRAA
Sbjct: 61  NWALNVSTPLTTPIFE----------------ESPLEEDNKQRFDPGAPPPFNLADIRAA 104

Query: 118 IPKHCWVKDPWKSMSYVVRDVVVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGHD 177
           IPKHCWVK+PWKS+SYVVRDV +VF LAA AAYLNNW+VWPLYW AQGTMFWALFVLGHD
Sbjct: 105 IPKHCWVKNPWKSLSYVVRDVAIVFALAAGAAYLNNWIVWPLYWLAQGTMFWALFVLGHD 164

Query: 178 CGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYR 237
           CGHGSFSND KLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHP+SEKIY 
Sbjct: 165 CGHGSFSNDPKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPMSEKIYN 224

Query: 238 TLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTA 297
           TLD  TRF RF +P  +LAYPFYLW+RSPGK GSH+ P+SDLF+P ERKDV+TST CWTA
Sbjct: 225 TLDKPTRFFRFTLPLVMLAYPFYLWARSPGKKGSHYHPDSDLFLPKERKDVLTSTACWTA 284

Query: 298 MAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRG 357
           MAALLV L+F +GP+Q+LKLYG+PYWI VMWLD VTYLHHHGHEDKLPWYRGKEWSYLRG
Sbjct: 285 MAALLVCLNFTIGPIQMLKLYGIPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRG 344

Query: 358 GLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKKSGPI 417
           GLTTLDRDYG  NNIHHDIGTHVIHHLFPQIPHYHL+EATEAA+PVLGKYYREP KSGP+
Sbjct: 345 GLTTLDRDYGLINNIHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYREPDKSGPL 404

Query: 418 PFNLFGDLIRSMSKDHYVSDNGDVVYYQTDPQLNGSSK 455
           P +L   L +S+ +DHYVSD G+VVYY+ DP L G  K
Sbjct: 405 PLHLLEILAKSIKEDHYVSDEGEVVYYKADPNLYGEVK 442

Chloroplast omega-3 fatty acid desaturase introduces the third double bond in the biosynthesis of 16:3 and 18:3 fatty acids, important constituents of plant membranes. It is thought to use ferredoxin as an electron donor and to act on fatty acids esterified to galactolipids, sulfolipids and phosphatidylglycerol.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 9

EC: .

EC: -

>sp|P48618|FAD3C_BRANA Omega-3 fatty acid desaturase, chloroplastic (Fragment) OS=Brassica napus GN=FAD7 PE=2 SV=1

 Score =  637 bits (1642), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 302/399 (75%), Positives = 332/399 (83%), Gaps = 15/399 (3%)

Query: 57  RNWGLKVSAPLRVAPLEGEDEEERINGVNGIGNNKGVEEEEGSEFDPGAPPPFKLADIRA 116
           RNW L V+ PL V        EE               E +   FDPGAPPPF LADIRA
Sbjct: 17  RNWALNVTTPLTVDSSSSPPIEE---------------EPKTQRFDPGAPPPFNLADIRA 61

Query: 117 AIPKHCWVKDPWKSMSYVVRDVVVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGH 176
           AIPKHCWVK+PWKSMSYVVR++ +VF LAA AAYLNNW+VWPLYW AQGTMFWALFVLGH
Sbjct: 62  AIPKHCWVKNPWKSMSYVVRELAIVFALAAGAAYLNNWLVWPLYWIAQGTMFWALFVLGH 121

Query: 177 DCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIY 236
           DCGHGSFSND +LNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHP+SEKIY
Sbjct: 122 DCGHGSFSNDPRLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPMSEKIY 181

Query: 237 RTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWT 296
           ++LD  TRF RF +P  +LAYPFYLW+RSPGK GSH+ P+SDLF+P ER DV+TST CWT
Sbjct: 182 KSLDKPTRFFRFTLPLVMLAYPFYLWARSPGKKGSHYHPDSDLFLPKERNDVLTSTACWT 241

Query: 297 AMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLR 356
           AMA LLV L+FVMGPMQ+LKLY +PYWI VMWLD VTYLHHHGHEDKLPWYRGKEWSYLR
Sbjct: 242 AMAVLLVCLNFVMGPMQMLKLYVIPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLR 301

Query: 357 GGLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKKSGP 416
           GGLTTLDRDYG  NNIHHDIGTHVIHHLFPQIPHYHL+EATEAA+PVLGKYYREP KSGP
Sbjct: 302 GGLTTLDRDYGLINNIHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYREPDKSGP 361

Query: 417 IPFNLFGDLIRSMSKDHYVSDNGDVVYYQTDPQLNGSSK 455
           +P +L G L +S+ +DH+VSD GDVVYY+ DP L G  K
Sbjct: 362 LPLHLLGILAKSIKEDHFVSDEGDVVYYEADPNLYGEIK 400

Chloroplast omega-3 fatty acid desaturase introduces the third double bond in the biosynthesis of 16:3 and 18:3 fatty acids, important constituents of plant membranes. It is thought to use ferredoxin as an electron donor and to act on fatty acids esterified to galactolipids, sulfolipids and phosphatidylglycerol.

Brassica napus (taxid: 3708)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 9

EC: .

EC: -

>sp|P48626|FAD3E_TOBAC Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Nicotiana tabacum GN=FAD3 PE=2 SV=1

 Score =  567 bits (1461), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 265/372 (71%), Positives = 311/372 (83%), Gaps = 1/372 (0%)

Query: 83  GVNGIGNNKGVEEEEGSEFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYVVRDVVVVF 142
           G++ I +     E E  EFDP APPPF+LA+IR  IPKHCWVKDP +S+SYVVRDV+ V 
Sbjct: 5   GISEIYDKNSFNEME-FEFDPSAPPPFRLAEIRNVIPKHCWVKDPLRSLSYVVRDVIFVA 63

Query: 143 GLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSIL 202
            L   A +L++W+ +PLYWA QGTMFWA+FVLGHDCGHGSFS+   LN+VVGH+LHS+IL
Sbjct: 64  TLIGIAIHLDSWLFYPLYWAIQGTMFWAIFVLGHDCGHGSFSDSQLLNNVVGHILHSAIL 123

Query: 203 VPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLW 262
           VPYHGWRISH+THHQNHG+VE DESW P+ EK+Y  +  +T+FLR+KIPFPLLAYP YL 
Sbjct: 124 VPYHGWRISHKTHHQNHGNVETDESWVPMPEKLYNKVGYSTKFLRYKIPFPLLAYPMYLM 183

Query: 263 SRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPY 322
            RSPGK+GSHF+P SDLF P ERK V+TST+CWT MAALL+ L    G +Q+ K+YG PY
Sbjct: 184 KRSPGKSGSHFNPYSDLFQPHERKYVVTSTLCWTVMAALLLYLCTAFGSLQMFKIYGAPY 243

Query: 323 WIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWFNNIHHDIGTHVIH 382
            IFVMWLD VTYLHHHG+E KLPWYRGKEWSYLRGGLTT+DRDYG FNNIHHDIGTHVIH
Sbjct: 244 LIFVMWLDFVTYLHHHGYEKKLPWYRGKEWSYLRGGLTTVDRDYGLFNNIHHDIGTHVIH 303

Query: 383 HLFPQIPHYHLIEATEAARPVLGKYYREPKKSGPIPFNLFGDLIRSMSKDHYVSDNGDVV 442
           HLFPQIPHYHL EAT+AA+PVLGKYYREPKKSGPIPF+L  DL RSM +DHYVSD+G++V
Sbjct: 304 HLFPQIPHYHLREATKAAKPVLGKYYREPKKSGPIPFHLVKDLTRSMKQDHYVSDSGEIV 363

Query: 443 YYQTDPQLNGSS 454
           +YQTDP +  S+
Sbjct: 364 FYQTDPHIFRSA 375

ER (microsomal) omega-3 fatty acid desaturase introduces the third double bond in the biosynthesis of 18:3 fatty acids, important constituents of plant membranes. It is thought to use cytochrome b5 as an electron donor and to act on fatty acids esterified to phosphatidylcholine and, possibly, other phospholipids.

Nicotiana tabacum (taxid: 4097)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 9

EC: .

EC: -

>sp|P32291|FAD3E_VIGRR Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Vigna radiata var. radiata GN=ARG1 PE=2 SV=1

 Score =  561 bits (1447), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 262/364 (71%), Positives = 309/364 (84%)

Query: 91  KGVEEEEGSEFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYVVRDVVVVFGLAAAAAY 150
            G  E + S FDPGAPPPFK+ADIRAAIPKHCW K   +S+SYV+RDV+VV  LAA+A  
Sbjct: 12  NGAREGDQSYFDPGAPPPFKIADIRAAIPKHCWEKSTLRSLSYVLRDVLVVTALAASAIS 71

Query: 151 LNNWVVWPLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRI 210
            N+W  WPLYW AQGTMFWALFVLGHDCGHGSFSN  KLNS VGH+LHS ILVPY+GWRI
Sbjct: 72  FNSWFFWPLYWPAQGTMFWALFVLGHDCGHGSFSNSSKLNSFVGHILHSLILVPYNGWRI 131

Query: 211 SHRTHHQNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTG 270
           SHRTHHQNHGHVE DESW PL+EK+Y+ LD  TR LR+  PFP+ AYPFYLW+RSPGK G
Sbjct: 132 SHRTHHQNHGHVEKDESWVPLTEKVYKNLDDMTRMLRYSFPFPIFAYPFYLWNRSPGKEG 191

Query: 271 SHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLD 330
           SHF+P S+LF P ERK V+TST+CW  + ++L+ LS  +GP+ +LKLYG+PY IFVMWLD
Sbjct: 192 SHFNPYSNLFSPGERKGVVTSTLCWGIVLSVLLYLSLTIGPIFMLKLYGVPYLIFVMWLD 251

Query: 331 LVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPH 390
            VTYLHHHG+  KLPWYRG+EWSYLRGGLTT+DRDYGW NN+HHDIGTHVIHHLFPQIPH
Sbjct: 252 FVTYLHHHGYTHKLPWYRGQEWSYLRGGLTTVDRDYGWINNVHHDIGTHVIHHLFPQIPH 311

Query: 391 YHLIEATEAARPVLGKYYREPKKSGPIPFNLFGDLIRSMSKDHYVSDNGDVVYYQTDPQL 450
           YHL+EAT++A+ VLGKYYREP+KSGP+PF+L   L++S+S+DH+VSD GD+VYYQTDP+L
Sbjct: 312 YHLVEATKSAKSVLGKYYREPQKSGPLPFHLLKYLLQSISQDHFVSDTGDIVYYQTDPKL 371

Query: 451 NGSS 454
           +  S
Sbjct: 372 HQDS 375

Microsomal (ER) omega-3 fatty acid desaturase introduces the third double bond in the biosynthesis of 18:3 fatty acids, important constituents of plant membranes. It is thought to use cytochrome b5 as an electron donor and to act on fatty acids esterified to phosphatidylcholine and, possibly, other phospholipids.

Vigna radiata var. radiata (taxid: 3916)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 9

EC: .

EC: -

>sp|P48625|FAD3E_SOYBN Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Glycine max GN=FAD3 PE=2 SV=1

 Score =  553 bits (1424), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 260/368 (70%), Positives = 308/368 (83%)

Query: 88  GNNKGVEEEEGSEFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYVVRDVVVVFGLAAA 147
            NN   ++    +FDP APPPFK+A+IRA+IPKHCWVK+PW+S+SYV+RDV+V+  L AA
Sbjct: 12  ANNGYQQKGSSFDFDPSAPPPFKIAEIRASIPKHCWVKNPWRSLSYVLRDVLVIAALVAA 71

Query: 148 AAYLNNWVVWPLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHG 207
           A + +NW++W +Y   QGTMFWALFVLGHDCGHGSFS+   LNS+VGH+LHSSILVPYHG
Sbjct: 72  AIHFDNWLLWLIYCPIQGTMFWALFVLGHDCGHGSFSDSPLLNSLVGHILHSSILVPYHG 131

Query: 208 WRISHRTHHQNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPG 267
           WRISHRTHHQNHGH+E DESW PL+EKIY+ LDS TR +RF +PFPL  YP YL+SRSPG
Sbjct: 132 WRISHRTHHQNHGHIEKDESWVPLTEKIYKNLDSMTRLIRFTVPFPLFVYPIYLFSRSPG 191

Query: 268 KTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFVM 327
           K GSHF+P S+LF PSERK +  ST+CW  M +LL+ LSF+  P+ +LKLYG+PYWIFVM
Sbjct: 192 KEGSHFNPYSNLFPPSERKGIAISTLCWATMFSLLIYLSFITSPLLVLKLYGIPYWIFVM 251

Query: 328 WLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWFNNIHHDIGTHVIHHLFPQ 387
           WLD VTYLHHHGH  KLPWYRGKEWSYLRGGLTT+DRDYGW  NIHHDIGTHVIHHLFPQ
Sbjct: 252 WLDFVTYLHHHGHHQKLPWYRGKEWSYLRGGLTTVDRDYGWIYNIHHDIGTHVIHHLFPQ 311

Query: 388 IPHYHLIEATEAARPVLGKYYREPKKSGPIPFNLFGDLIRSMSKDHYVSDNGDVVYYQTD 447
           IPHYHL+EAT+AA+PVLG YYREP++S P+PF+L   LI+SM +DH+VSD GDVVYYQTD
Sbjct: 312 IPHYHLVEATQAAKPVLGDYYREPERSAPLPFHLIKYLIQSMRQDHFVSDTGDVVYYQTD 371

Query: 448 PQLNGSSK 455
             L  S +
Sbjct: 372 SLLLHSQR 379

Microsomal (ER) omega-3 fatty acid desaturase introduces the third double bond in the biosynthesis of 18:3 fatty acids, important constituents of plant membranes. It is thought to use cytochrome b5 as an electron donor and to act on fatty acids esterified to phosphatidylcholine and, possibly, other phospholipids.

Glycine max (taxid: 3847)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 9

EC: .

EC: -

>sp|P48624|FAD3E_BRANA Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Brassica napus GN=FAD3 PE=2 SV=1

 Score =  547 bits (1410), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 262/375 (69%), Positives = 304/375 (81%), Gaps = 8/375 (2%)

Query: 76  DEEERINGVNGIGNNKGVEEEEGSEFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYVV 135
           D+   +NG      + G  +EEG  FDP A PPFK+ DIRAAIPKHCWVK P +SMSYV 
Sbjct: 6   DQRSNVNG------DSGARKEEG--FDPSAQPPFKIGDIRAAIPKHCWVKSPLRSMSYVT 57

Query: 136 RDVVVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGH 195
           RD+  V  LA AA Y ++W +WPLYW AQGT+FWA+FVLGHDCGHGSFS+   LNSVVGH
Sbjct: 58  RDIFAVAALAMAAVYFDSWFLWPLYWVAQGTLFWAIFVLGHDCGHGSFSDIPLLNSVVGH 117

Query: 196 LLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLL 255
           +LHS ILVPYHGWRISHRTHHQNHGHVENDESW PL EK+Y+ L  +TR LR+ +P P+L
Sbjct: 118 ILHSFILVPYHGWRISHRTHHQNHGHVENDESWVPLPEKLYKNLPHSTRMLRYTVPLPML 177

Query: 256 AYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLL 315
           AYP YLW RSPGK GSHF+P S LF PSERK + TST CW+ M A LV LSF++ P+ +L
Sbjct: 178 AYPIYLWYRSPGKEGSHFNPYSSLFAPSERKLIATSTTCWSIMLATLVYLSFLVDPVTVL 237

Query: 316 KLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWFNNIHHD 375
           K+YG+PY IFVMWLD VTYLHHHGH++KLPWYRGKEWSYLRGGLTT+DRDYG FNNIHHD
Sbjct: 238 KVYGVPYIIFVMWLDAVTYLHHHGHDEKLPWYRGKEWSYLRGGLTTIDRDYGIFNNIHHD 297

Query: 376 IGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKKSGPIPFNLFGDLIRSMSKDHYV 435
           IGTHVIHHLFPQIPHYHL++AT AA+ VLG+YYREPK SG IP +L   L+ S+ KDHYV
Sbjct: 298 IGTHVIHHLFPQIPHYHLVDATRAAKHVLGRYYREPKTSGAIPIHLVESLVASIKKDHYV 357

Query: 436 SDNGDVVYYQTDPQL 450
           SD GD+V+Y+TDP L
Sbjct: 358 SDTGDIVFYETDPDL 372

ER (microsomal) omega-3 fatty acid desaturase introduces the third double bond in the biosynthesis of 18:3 fatty acids, important constituents of plant membranes. It is thought to use cytochrome b5 as an electron donor and to act on fatty acids esterified to phosphatidylcholine and, possibly, other phospholipids.

Brassica napus (taxid: 3708)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 9

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	457
340749464	457	omega-3 fatty acid desaturase [Citrus me	1.0	1.0	0.993	0.0
224091014	451	predicted protein [Populus trichocarpa]	0.978	0.991	0.831	0.0
224140429	452	predicted protein [Populus trichocarpa]	0.971	0.982	0.797	0.0
164521896	451	chloroplast omega-3 fatty acid desaturas	0.978	0.991	0.799	0.0
358249324	453	omega-3 fatty acid desaturase, chloropla	0.980	0.988	0.8	0.0
164521898	454	omega-3 fatty acid desaturase [Vigna ung	0.984	0.991	0.764	0.0
255582674	452	Omega-3 fatty acid desaturase, chloropla	0.962	0.973	0.806	0.0
225448457	456	PREDICTED: omega-3 fatty acid desaturase	0.991	0.993	0.781	0.0
1694625	441	omega-3 fatty acid desaturase [Nicotiana	0.964	1.0	0.778	0.0
156900674	446	chloroplast omega-3 fatty acid desaturas	0.960	0.984	0.801	0.0

>gi|340749464|gb|AEK67592.1| omega-3 fatty acid desaturase [Citrus medica var. sarcodactylis]

 Score =  939 bits (2426), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 454/457 (99%), Positives = 456/457 (99%)

Query: 1   MASWVLSECGLKPLPHIFPRPRTGINPSKARFLHSKKSITDLKLPSVKCSGDFSRDRNWG 60
           MASWVLSECGL PLPHIFPRPRTGINPSKARFLHSKKSITDLKLPSVKCSGDFSRDRNWG
Sbjct: 1   MASWVLSECGLTPLPHIFPRPRTGINPSKARFLHSKKSITDLKLPSVKCSGDFSRDRNWG 60

Query: 61  LKVSAPLRVAPLEGEDEEERINGVNGIGNNKGVEEEEGSEFDPGAPPPFKLADIRAAIPK 120
           LKVSAPLRVAPLEGEDEEERINGVNGIGNNKGVEEEEGSEFDPGAPPPFKLADIRAAIPK
Sbjct: 61  LKVSAPLRVAPLEGEDEEERINGVNGIGNNKGVEEEEGSEFDPGAPPPFKLADIRAAIPK 120

Query: 121 HCWVKDPWKSMSYVVRDVVVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGHDCGH 180
           HCWVKDPWKSMSYVVRDVVVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGHDCGH
Sbjct: 121 HCWVKDPWKSMSYVVRDVVVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGHDCGH 180

Query: 181 GSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTLD 240
           GSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKI+RTLD
Sbjct: 181 GSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIFRTLD 240

Query: 241 SATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAA 300
           SATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAA
Sbjct: 241 SATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAA 300

Query: 301 LLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLT 360
           LLVGLSFVMGPMQLLKLYG+PYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLT
Sbjct: 301 LLVGLSFVMGPMQLLKLYGVPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLT 360

Query: 361 TLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKKSGPIPFN 420
           TLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKKSGPIPFN
Sbjct: 361 TLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKKSGPIPFN 420

Query: 421 LFGDLIRSMSKDHYVSDNGDVVYYQTDPQLNGSSKSG 457
           LFGDLIRSMSKDHYVSDNGDVVYYQTDPQLNGSSKSG
Sbjct: 421 LFGDLIRSMSKDHYVSDNGDVVYYQTDPQLNGSSKSG 457

Source: Citrus medica var. sarcodactylis

Species: Citrus medica

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224091014|ref|XP_002309146.1| predicted protein [Populus trichocarpa] gi|222855122|gb|EEE92669.1| predicted protein [Populus trichocarpa]

 Score =  776 bits (2005), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/456 (83%), Positives = 410/456 (89%), Gaps = 9/456 (1%)

Query: 1   MASWVLSECGLKPLPHIFPRPRTGI-NPSKARFLHSKKSITDLK-LPSVKCSGDFSRDRN 58
           MASWVLSECGLKPLP  +PRPRTGI NPSK RFL++ +++TDLK LP  K S    R+RN
Sbjct: 1   MASWVLSECGLKPLPQFWPRPRTGIINPSKPRFLYTNRTLTDLKRLPFDKFSRGCFRERN 60

Query: 59  WGLKVSAPLRVAPLEGEDEEERINGVNGIGNNKGVEEEEGSEFDPGAPPPFKLADIRAAI 118
           WGLKVSAP RVA L+GE E+ ++ G NG+G      E+E +EFDPG+PPPFKL+DIR AI
Sbjct: 61  WGLKVSAPYRVASLDGE-EDNKVIGFNGVG------EDEETEFDPGSPPPFKLSDIRTAI 113

Query: 119 PKHCWVKDPWKSMSYVVRDVVVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGHDC 178
           PKHCWVKDPWKSMSYVVRDV VVFGLAAAAAY NNWVVWPLYWAAQGTMFWALFVLGHDC
Sbjct: 114 PKHCWVKDPWKSMSYVVRDVAVVFGLAAAAAYFNNWVVWPLYWAAQGTMFWALFVLGHDC 173

Query: 179 GHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRT 238
           GHGSFSN++KLNSV GH+LHSSILVPYHGWRISHRTHHQNHGHVENDESWHPL EKIY++
Sbjct: 174 GHGSFSNNNKLNSVAGHILHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPEKIYKS 233

Query: 239 LDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAM 298
           LD  T+ LRF +PFP+LAYP YLWSRSPGK+GSHFDPNSDLFVPSERKDVITST+CWTAM
Sbjct: 234 LDGITKMLRFTVPFPMLAYPIYLWSRSPGKSGSHFDPNSDLFVPSERKDVITSTLCWTAM 293

Query: 299 AALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGG 358
           AALLVGLSFVMGP+QLLKLYG+PY  FVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGG
Sbjct: 294 AALLVGLSFVMGPVQLLKLYGVPYVGFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGG 353

Query: 359 LTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKKSGPIP 418
           LTT+DRDYGW NNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPV GKYYREPKKSGP+P
Sbjct: 354 LTTIDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVFGKYYREPKKSGPLP 413

Query: 419 FNLFGDLIRSMSKDHYVSDNGDVVYYQTDPQLNGSS 454
           F+L G LIRSM KDHYVSD GDVVYYQTDPQ  GSS
Sbjct: 414 FHLIGILIRSMRKDHYVSDTGDVVYYQTDPQHGGSS 449

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224140429|ref|XP_002323585.1| predicted protein [Populus trichocarpa] gi|222868215|gb|EEF05346.1| predicted protein [Populus trichocarpa]

 Score =  752 bits (1941), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/459 (79%), Positives = 401/459 (87%), Gaps = 15/459 (3%)

Query: 1   MASWVLSECGLKPLPHIFPRPRTGI----NPSKARFLHSKKSITDLK-LPSVKCSGDFSR 55
           MAS VLSECGLKPLP    RPRTGI    NPSK RFL++ +++TD+K LP  K S    R
Sbjct: 1   MASLVLSECGLKPLPQTLHRPRTGIISHNNPSKTRFLYTNRTLTDIKRLPFDKFSRGCFR 60

Query: 56  DRNWGLKVSAPLRVAPLEGEDEEERINGVNGIGNNKGVEEEEGSEFDPGAPPPFKLADIR 115
           +RNWGLKVSAP +VA  E   E+ +ING NG+G       EE  EFDPG+PPPF L+D+R
Sbjct: 61  ERNWGLKVSAPFKVAYGE---EDNKINGFNGLG-------EEEIEFDPGSPPPFNLSDVR 110

Query: 116 AAIPKHCWVKDPWKSMSYVVRDVVVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLG 175
           AAIPKHCWVKDPW+SMSYVVRDV VVFGLAA AAYLNNW+VWPLYWAAQ TMFWA+FVLG
Sbjct: 111 AAIPKHCWVKDPWRSMSYVVRDVAVVFGLAAVAAYLNNWLVWPLYWAAQSTMFWAIFVLG 170

Query: 176 HDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKI 235
           HDCGHGSFSN+H LNSVVGH+LHSSILVPYHGWRISHRTHHQNHGHVE DESWHPLSEKI
Sbjct: 171 HDCGHGSFSNNHNLNSVVGHILHSSILVPYHGWRISHRTHHQNHGHVEKDESWHPLSEKI 230

Query: 236 YRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCW 295
           Y++LD  T+ LRF +PFP+LAYP YLWSRSPGKTGSHF PNSDLFVPSE+ DVITSTVCW
Sbjct: 231 YKSLDDMTKKLRFTVPFPMLAYPIYLWSRSPGKTGSHFHPNSDLFVPSEKIDVITSTVCW 290

Query: 296 TAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYL 355
           TAM ALLVGLSFVMGP+QLL LYG+PY  FVMWLDLVTYLHHHGHEDKLPWYRGKEWSYL
Sbjct: 291 TAMVALLVGLSFVMGPIQLLNLYGIPYVGFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYL 350

Query: 356 RGGLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKKSG 415
           RGGLTTLDRDYGW NNIHHDIGTH+IHHLFPQIPHYHLIEATEAA+PVLGKYYREPKKSG
Sbjct: 351 RGGLTTLDRDYGWINNIHHDIGTHIIHHLFPQIPHYHLIEATEAAKPVLGKYYREPKKSG 410

Query: 416 PIPFNLFGDLIRSMSKDHYVSDNGDVVYYQTDPQLNGSS 454
           P+PF+L GDLIRSM++DHYVSD GDVVYYQTD Q++ SS
Sbjct: 411 PLPFHLIGDLIRSMARDHYVSDTGDVVYYQTDSQVSRSS 449

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|164521896|gb|ABY60737.1| chloroplast omega-3 fatty acid desaturase [Vigna unguiculata]

 Score =  748 bits (1932), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/459 (79%), Positives = 399/459 (86%), Gaps = 12/459 (2%)

Query: 1   MASWVLSECGLKPLPHIFPRPRTGI---NPSKARFLHSKKSITDLKLPSVKCSGDFSRDR 57
           MA+WVLSECGL+PLP +FPRP   I    PSK RF  + K + DLKL     S    R+R
Sbjct: 1   MATWVLSECGLRPLPPVFPRPTRPILCQKPSKFRFFSTNKGVADLKLQPRGFSSCNYRER 60

Query: 58  NWGLKVSAPLRVAPLEGEDEEERINGVNGIGNNKGVEEEEGSEFDPGAPPPFKLADIRAA 117
            W L VSAP+RVA  EGE  EE +NGVNG+G       EE  EFDP APPPF LADIRAA
Sbjct: 61  RWELGVSAPVRVATSEGE--EESVNGVNGVG-------EEVPEFDPSAPPPFNLADIRAA 111

Query: 118 IPKHCWVKDPWKSMSYVVRDVVVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGHD 177
           IPKHCWVKDPWKSMSYVVRDV+VVFGLAAAAAYLNNW+VWPLYWAAQGTMFWALFVLGHD
Sbjct: 112 IPKHCWVKDPWKSMSYVVRDVIVVFGLAAAAAYLNNWIVWPLYWAAQGTMFWALFVLGHD 171

Query: 178 CGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYR 237
           CGHGSFSND KLNSV GHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPL EKI+ 
Sbjct: 172 CGHGSFSNDPKLNSVAGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPEKIFN 231

Query: 238 TLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTA 297
           ++D+ TR LRFK+PFPLLAYP YLW+RSPGKTGSHFDPNSDLFVPSERKDVITST+CWTA
Sbjct: 232 SMDNVTRTLRFKVPFPLLAYPIYLWNRSPGKTGSHFDPNSDLFVPSERKDVITSTICWTA 291

Query: 298 MAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRG 357
           MAALLVGL FVMGP+QLLKLYG+PY +FVMWLDLVTYLHHHGHEDKLPWYRG+EWSYLRG
Sbjct: 292 MAALLVGLGFVMGPIQLLKLYGIPYVLFVMWLDLVTYLHHHGHEDKLPWYRGEEWSYLRG 351

Query: 358 GLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKKSGPI 417
           GLTT+DRDYGW NNIHHDIGTHVIHHLFPQIPHYHLIEATEAA+PVLG+YYREPKKS P+
Sbjct: 352 GLTTIDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLIEATEAAKPVLGQYYREPKKSSPL 411

Query: 418 PFNLFGDLIRSMSKDHYVSDNGDVVYYQTDPQLNGSSKS 456
           PF L G+L+RSM KDH+VSD GDVVYYQTDP ++ +S S
Sbjct: 412 PFYLIGELLRSMKKDHFVSDTGDVVYYQTDPTISNTSTS 450

Source: Vigna unguiculata

Species: Vigna unguiculata

Genus: Vigna

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358249324|ref|NP_001239777.1| omega-3 fatty acid desaturase, chloroplastic-like [Glycine max] gi|255634917|gb|ACU17817.1| unknown [Glycine max] gi|332183197|gb|AEE25912.1| chloroplast fatty acid desaturase 8 [Glycine max]

 Score =  745 bits (1924), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/460 (80%), Positives = 402/460 (87%), Gaps = 12/460 (2%)

Query: 1   MASWVLSECGLKPLPHIFPR---PRTGINPSKARFLHSKKSITDLKLPSVKCSGDFSRDR 57
           MA+WVLSECGL+PLP +FPR   P +   PSK+RFL + K + DL L +   +    RDR
Sbjct: 1   MATWVLSECGLRPLPPVFPRSTRPISCQKPSKSRFLSTNKGVPDLNLQARGLTCCSFRDR 60

Query: 58  NWGLKVSAPLRVAPLEGEDEEERINGVN-GIGNNKGVEEEEGSEFDPGAPPPFKLADIRA 116
            W L VSAPL+ A  EGE EEER NG N G+G       EE SEFDP APPPFKLADIRA
Sbjct: 61  KWELGVSAPLKFATNEGE-EEERTNGANNGVG-------EEVSEFDPSAPPPFKLADIRA 112

Query: 117 AIPKHCWVKDPWKSMSYVVRDVVVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGH 176
           AIPKHCWVKDPWKSMSYVVRDV+VVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGH
Sbjct: 113 AIPKHCWVKDPWKSMSYVVRDVIVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGH 172

Query: 177 DCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIY 236
           DCGHGSFSN+ KLNSV GHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPL EKI+
Sbjct: 173 DCGHGSFSNNPKLNSVAGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPEKIF 232

Query: 237 RTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWT 296
           ++LD+ TR LRF +PFPLLAYP YLWSRSPGKTGSHF+P+SDLFVPSERKDVITST+CWT
Sbjct: 233 KSLDNVTRILRFTLPFPLLAYPIYLWSRSPGKTGSHFNPDSDLFVPSERKDVITSTICWT 292

Query: 297 AMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLR 356
           AMAALLVGL FVMGP+QLLKLYG+PY IFVMWLDLVTYLHHHGHEDKLPWYRG+EWSYLR
Sbjct: 293 AMAALLVGLGFVMGPVQLLKLYGIPYAIFVMWLDLVTYLHHHGHEDKLPWYRGEEWSYLR 352

Query: 357 GGLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKKSGP 416
           GGLTT+DRDYGW NNIHHDIGTHVIHHLFPQIPHYHLIEATEAA+PVLG+YYREPKKS P
Sbjct: 353 GGLTTIDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLIEATEAAKPVLGQYYREPKKSSP 412

Query: 417 IPFNLFGDLIRSMSKDHYVSDNGDVVYYQTDPQLNGSSKS 456
           +P  L G+L+RSM KDH+VSD+GD+VYYQTDP L+ SS S
Sbjct: 413 LPIYLIGELLRSMKKDHFVSDSGDIVYYQTDPTLSSSSTS 452

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|164521898|gb|ABY60738.1| omega-3 fatty acid desaturase [Vigna unguiculata]

 Score =  739 bits (1909), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/459 (76%), Positives = 396/459 (86%), Gaps = 9/459 (1%)

Query: 1   MASWVLSECGLKPLPHIFPRPRTGI---NPSKARFLHSKKSITDLKLPSVKCSGDFSRDR 57
           MA+W+LSECG+KPL  +FPRPRTG    + SK  F  + KS+ DLK   ++C+    RDR
Sbjct: 1   MATWLLSECGMKPLAPVFPRPRTGAVLSSSSKVGFSDTNKSVADLKFQPLRCN---LRDR 57

Query: 58  NWGLKVSAPLRVAPLEGEDEEERINGVNGIGNNKGVEEEEGSEFDPGAPPPFKLADIRAA 117
           NWGLKVS PLRV   E ED+   ++ +NG     GV+ E+  EFDPGA PPF LADIRAA
Sbjct: 58  NWGLKVSTPLRVPSTEEEDQTNVVDVMNG---TNGVDHEKRPEFDPGAAPPFNLADIRAA 114

Query: 118 IPKHCWVKDPWKSMSYVVRDVVVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGHD 177
           IPKHCWVKDPWKSMSYVVRDV+VV GLAA AAYLNNW+VWPLYWAAQGTMFWALFVLGHD
Sbjct: 115 IPKHCWVKDPWKSMSYVVRDVIVVLGLAAGAAYLNNWLVWPLYWAAQGTMFWALFVLGHD 174

Query: 178 CGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYR 237
           CGHGSFSND KLNSV+GHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSE+++R
Sbjct: 175 CGHGSFSNDPKLNSVIGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSERVFR 234

Query: 238 TLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTA 297
           +LD+ATR LRF  PFPLLAYP YLW RSPGKTGSHFDP+SDLF+P+ERKDV+TST  W A
Sbjct: 235 SLDTATRMLRFTAPFPLLAYPVYLWQRSPGKTGSHFDPSSDLFLPNERKDVLTSTASWAA 294

Query: 298 MAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRG 357
           M  LLVGL FVMGP++LLKLYG+PY +FVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRG
Sbjct: 295 MLGLLVGLGFVMGPIRLLKLYGVPYVLFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRG 354

Query: 358 GLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKKSGPI 417
           GLTT+DRDYGW NNIHH+IGTHVIHHLFPQIPHYHL+EATEAA+PV G+YY+EPKKS P+
Sbjct: 355 GLTTIDRDYGWLNNIHHNIGTHVIHHLFPQIPHYHLVEATEAAKPVFGEYYKEPKKSAPL 414

Query: 418 PFNLFGDLIRSMSKDHYVSDNGDVVYYQTDPQLNGSSKS 456
           PF+L GDLIRS+  DH+VS  GDVVYYQTD ++NGS+KS
Sbjct: 415 PFHLLGDLIRSLKTDHFVSVTGDVVYYQTDSKINGSAKS 453

Source: Vigna unguiculata

Species: Vigna unguiculata

Genus: Vigna

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255582674|ref|XP_002532116.1| Omega-3 fatty acid desaturase, chloroplast precursor, putative [Ricinus communis] gi|223528219|gb|EEF30278.1| Omega-3 fatty acid desaturase, chloroplast precursor, putative [Ricinus communis]

 Score =  739 bits (1908), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/464 (80%), Positives = 404/464 (87%), Gaps = 24/464 (5%)

Query: 1   MASWVLSECGLKPL--PHIFPRPRTGI----NPSKARFLHSKKSI---TDLK-LPSVKCS 50
           MASWV+SECGLKPL  P  F R RTG+    N SK RFLH  KS    TDLK LP V   
Sbjct: 1   MASWVISECGLKPLSQPQKFSRTRTGVVSNSNFSKPRFLHISKSTNAATDLKKLPFV--- 57

Query: 51  GDFSRDRNWGLKVSAPLRVAPLEGEDEEERINGVNGIGNNKGVEEEEGSEFDPGAPPPFK 110
             FSR++ WG KVSAP R A +E  DEEE+ NG  GI       E+E +EFDPGAPPPFK
Sbjct: 58  -SFSREKTWGAKVSAPYRSASIE--DEEEK-NGSIGI-------EKEEAEFDPGAPPPFK 106

Query: 111 LADIRAAIPKHCWVKDPWKSMSYVVRDVVVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWA 170
           L+DIRAAIPKHCW+K+ W+SMSYVVRDV VVFGLAAAAAYLNNWVVWPLYWAAQGTMFWA
Sbjct: 107 LSDIRAAIPKHCWIKNSWRSMSYVVRDVAVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWA 166

Query: 171 LFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHP 230
           LFVLGHDCGHGSFSN++KLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHP
Sbjct: 167 LFVLGHDCGHGSFSNNNKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHP 226

Query: 231 LSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVIT 290
           LSEKI+R LD  TR LRF +PFP+LAYPFYLWSRSPGKTGSHF P+SDLFV +ERKDVIT
Sbjct: 227 LSEKIFRNLDGITRTLRFSLPFPMLAYPFYLWSRSPGKTGSHFHPDSDLFVKNERKDVIT 286

Query: 291 STVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGK 350
           STVCWTAM ALLVGLSFVMGP+QLLKLYG+PYW+FVMWLD VTY+HHHGHEDKLPWYRGK
Sbjct: 287 STVCWTAMVALLVGLSFVMGPIQLLKLYGIPYWVFVMWLDSVTYMHHHGHEDKLPWYRGK 346

Query: 351 EWSYLRGGLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYRE 410
           EWSYLRGGLTTLDRDYGW NNIHHDIGTHVIHHLFPQIPHYHLIEATEAA+PVLGKYYRE
Sbjct: 347 EWSYLRGGLTTLDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLIEATEAAKPVLGKYYRE 406

Query: 411 PKKSGPIPFNLFGDLIRSMSKDHYVSDNGDVVYYQTDPQLNGSS 454
           PKKSG +PF+L  DLIRS+ KDHYVSD GDV+YYQTDPQL+G+S
Sbjct: 407 PKKSGLLPFHLIEDLIRSLKKDHYVSDTGDVLYYQTDPQLSGTS 450

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225448457|ref|XP_002273774.1| PREDICTED: omega-3 fatty acid desaturase, chloroplastic [Vitis vinifera]

 Score =  738 bits (1905), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/458 (78%), Positives = 396/458 (86%), Gaps = 5/458 (1%)

Query: 1   MASWVLSECGLKPLPHIFPRPRTGINPSKARFLHSKKS--ITDLKLPSVKCSGDFSRDRN 58
           MASWV+SECGL+PLP I+PRPRTGI+ ++   L  +      + K PS+  SG  SR R 
Sbjct: 1   MASWVVSECGLRPLPRIYPRPRTGISSTETSQLKCRALPLCKNGKAPSLWVSGG-SRSRE 59

Query: 59  WGLKVSAPLRVAPLEGEDEEERINGVNGIGNNKGVEEEEGSEFDPGAPPPFKLADIRAAI 118
           WGLKVSAPL V  ++ E  E     +NG+      E +    FDPGAPPPF+LA+IRAAI
Sbjct: 60  WGLKVSAPLMVGSVDEEFREG--EAINGVSELGLGEGDGDGGFDPGAPPPFRLAEIRAAI 117

Query: 119 PKHCWVKDPWKSMSYVVRDVVVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGHDC 178
           PKHCW+KDPW+SMSYVVRDV VVFGLAAAAAY N+W VWPLYW AQGTMFWALFVLGHDC
Sbjct: 118 PKHCWMKDPWRSMSYVVRDVAVVFGLAAAAAYFNHWAVWPLYWFAQGTMFWALFVLGHDC 177

Query: 179 GHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRT 238
           GHGSFS++ KLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYR+
Sbjct: 178 GHGSFSSNPKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRS 237

Query: 239 LDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAM 298
           LD+ATR LRF +PFP+LAYP YLW RSPGKTGSHFDPNSDLF+P+ERKDVITSTVCW+AM
Sbjct: 238 LDTATRTLRFTLPFPMLAYPLYLWGRSPGKTGSHFDPNSDLFIPNERKDVITSTVCWSAM 297

Query: 299 AALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGG 358
           AALLV LSFVMGP+Q+LKLYG+PYWIFVMWLDLVTYLHHHGHE+KLPWYRGKEWSYLRGG
Sbjct: 298 AALLVCLSFVMGPVQMLKLYGIPYWIFVMWLDLVTYLHHHGHEEKLPWYRGKEWSYLRGG 357

Query: 359 LTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKKSGPIP 418
           LTTLDRDYG  NNIHHDIGTHVIHHLFPQIPHYHL+EAT+AA+PVLGKYYREPKKSGP+P
Sbjct: 358 LTTLDRDYGVINNIHHDIGTHVIHHLFPQIPHYHLVEATKAAKPVLGKYYREPKKSGPLP 417

Query: 419 FNLFGDLIRSMSKDHYVSDNGDVVYYQTDPQLNGSSKS 456
           F+L G LIRSM +DHYVSD GDVVYYQ DPQL GS KS
Sbjct: 418 FHLLGSLIRSMKQDHYVSDTGDVVYYQKDPQLPGSQKS 455

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|1694625|dbj|BAA11475.1| omega-3 fatty acid desaturase [Nicotiana tabacum] gi|21668486|dbj|BAC01274.1| plastid omega-3 fatty acid desaturase [Nicotiana tabacum]

 Score =  738 bits (1905), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/455 (77%), Positives = 396/455 (87%), Gaps = 14/455 (3%)

Query: 1   MASWVLSECGLKPLPHIFPRPRTGINPSKARFLHSKKSITDLKLPSVKCSGDFSRDRNWG 60
           MASWVLSECGL+PLP I+P+PRTG   S +  +  + S TDL   ++  S + +++RNW 
Sbjct: 1   MASWVLSECGLRPLPRIYPKPRTGAATSASSHIKLRISRTDLSGSAISLS-NTNKERNWA 59

Query: 61  LKVSAPLRVAPLEGEDEEERINGVNGIGNNKGVEEEEGSEFDPGAPPPFKLADIRAAIPK 120
           L+VSAPLR+  + GE+E ER N       N G     G  FDPGAPPPFKL+DI+AAIPK
Sbjct: 60  LRVSAPLRIQTV-GEEESERTN-------NSG-----GEFFDPGAPPPFKLSDIKAAIPK 106

Query: 121 HCWVKDPWKSMSYVVRDVVVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGHDCGH 180
           HCWVK+PWKSMSYVVRDV +VFGLAAAAAY NNWVVWPLYW AQ TMFWALFVLGHDCGH
Sbjct: 107 HCWVKNPWKSMSYVVRDVAIVFGLAAAAAYFNNWVVWPLYWFAQSTMFWALFVLGHDCGH 166

Query: 181 GSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTLD 240
           GSFSN+HKLNSVVGH+LHSSILVPYHGWRISHRTHHQNHGHVENDESWHP+ EKIY +LD
Sbjct: 167 GSFSNNHKLNSVVGHILHSSILVPYHGWRISHRTHHQNHGHVENDESWHPIPEKIYNSLD 226

Query: 241 SATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAA 300
            AT+ LRF +PFPLLAYPFYLWSRSPGK GSHFDPNSDLFVPSE+KDV+TST+CWTAMAA
Sbjct: 227 LATKKLRFTLPFPLLAYPFYLWSRSPGKKGSHFDPNSDLFVPSEKKDVMTSTLCWTAMAA 286

Query: 301 LLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLT 360
           LLVGLSFVMGP Q+LKLYG+PYW FVMWLDLVTYLHHHGH+DKLPWYRG+EWSYLRGGLT
Sbjct: 287 LLVGLSFVMGPFQVLKLYGIPYWGFVMWLDLVTYLHHHGHDDKLPWYRGEEWSYLRGGLT 346

Query: 361 TLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKKSGPIPFN 420
           TLDRDYGW NNIHHDIGTHVIHHLFPQIPHYHL+EATEAA+PVLGKYY+EPKKSGP+PF 
Sbjct: 347 TLDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYKEPKKSGPLPFY 406

Query: 421 LFGDLIRSMSKDHYVSDNGDVVYYQTDPQLNGSSK 455
           L G LI+SM +DHYVSD GD+VYY+TDPQL+G  K
Sbjct: 407 LLGVLIKSMKQDHYVSDTGDIVYYRTDPQLSGFQK 441

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|156900674|gb|ABU96743.1| chloroplast omega-3 fatty acid desaturase [Jatropha curcas]

 Score =  738 bits (1904), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/459 (80%), Positives = 400/459 (87%), Gaps = 20/459 (4%)

Query: 1   MASWVLSECGLKPLPHIFPRPRTG----INPSKARFLHSKKSITDLKLPSVKCSGDFS-R 55
           MASWVLSECGLKPLP  F RPRTG     N SK RFL + K++TDL+ P       FS  
Sbjct: 1   MASWVLSECGLKPLPQFFARPRTGAVLRTNSSKPRFLQTSKTVTDLRQP-------FSFG 53

Query: 56  DRNWGLKVSAPLRVAPLEGEDEEERINGVNGIGNNKGVEEEEGSEFDPGAPPPFKLADIR 115
           +R+W +KVSAP RV   E E   E I G  GI     +EE+EG +FDPGAPPPFKL+DIR
Sbjct: 54  ERSWRVKVSAPYRVG--EEEKGNEEIKGAIGI-----IEEKEG-KFDPGAPPPFKLSDIR 105

Query: 116 AAIPKHCWVKDPWKSMSYVVRDVVVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLG 175
           AAIPKHCWVKDPWKSMSYVVRDV VVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLG
Sbjct: 106 AAIPKHCWVKDPWKSMSYVVRDVAVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLG 165

Query: 176 HDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKI 235
           HDCGHGSFSN+ KLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPL EKI
Sbjct: 166 HDCGHGSFSNNPKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPEKI 225

Query: 236 YRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCW 295
           +R LD+ TR LRF +PFP+LAYPFYLW+RSPGKTGSHF P+SDLF+P+ERKDVITST+CW
Sbjct: 226 FRNLDNITRKLRFTVPFPMLAYPFYLWNRSPGKTGSHFHPDSDLFLPNERKDVITSTICW 285

Query: 296 TAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYL 355
           TAMAALLVGLSFVMGP+QLLKLYG+PYW FVMWLD VTYLHHHGHE+KLPWYRG EWSYL
Sbjct: 286 TAMAALLVGLSFVMGPIQLLKLYGIPYWGFVMWLDFVTYLHHHGHEEKLPWYRGNEWSYL 345

Query: 356 RGGLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKKSG 415
           RGGLTTLDRDYGW NNIHHDIGTHVIHHLFPQIPHYHL EATEAA+PVLGKYYREP+KSG
Sbjct: 346 RGGLTTLDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLTEATEAAKPVLGKYYREPEKSG 405

Query: 416 PIPFNLFGDLIRSMSKDHYVSDNGDVVYYQTDPQLNGSS 454
           P+PF+L G L+RS+ KDHYVSD GDVVYYQTD QL+GS+
Sbjct: 406 PLPFHLIGSLVRSLRKDHYVSDTGDVVYYQTDRQLSGST 444

Source: Jatropha curcas

Species: Jatropha curcas

Genus: Jatropha

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	457
TAIR|locus:2169677	435	FAD8 "fatty acid desaturase 8"	0.770	0.809	0.781	4.1e-175
TAIR|locus:2074628	446	FAD7 "fatty acid desaturase 7"	0.958	0.982	0.671	2.2e-169
TAIR|locus:2005508	386	FAD3 "fatty acid desaturase 3"	0.765	0.906	0.694	3.3e-143
UNIPROTKB|Q41131	387	Q41131 "Oleate 12-hydroxylase"	0.665	0.785	0.358	6.5e-51
TAIR|locus:2099297	383	FAD2 "fatty acid desaturase 2"	0.665	0.793	0.361	5.8e-50
ASPGD|ASPL0000055218	471	odeA [Emericella nidulans (tax	0.323	0.314	0.393	2.5e-43
WB|WBGene00001394	376	fat-2 [Caenorhabditis elegans	0.621	0.755	0.374	4.6e-41
ASPGD|ASPL0000066189	394	an2 [Emericella nidulans (taxi	0.306	0.355	0.401	3e-40
WB|WBGene00001393	402	fat-1 [Caenorhabditis elegans	0.617	0.701	0.359	2.3e-39
CGD|CAL0003001	436	FAD2 [Candida albicans (taxid:	0.365	0.383	0.316	1.9e-31

TAIR|locus:2169677 FAD8 "fatty acid desaturase 8" [Arabidopsis thaliana (taxid:3702)]

 Score = 1608 (571.1 bits), Expect = 4.1e-175, Sum P(2) = 4.1e-175
 Identities = 275/352 (78%), Positives = 301/352 (85%)

Query:   101 FDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLY 160
             FDPGAPPPF LADIRAAIPKHCWVK+PW SMSY                        PLY
Sbjct:    81 FDPGAPPPFNLADIRAAIPKHCWVKNPWMSMSYVVRDVAIVFGLAAVAAYFNNWLLWPLY 140

Query:   161 WAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHG 220
             W AQGTMFWALFVLGHDCGHGSFSND +LNSV GHLLHSSILVPYHGWRISHRTHHQNHG
Sbjct:   141 WFAQGTMFWALFVLGHDCGHGSFSNDPRLNSVAGHLLHSSILVPYHGWRISHRTHHQNHG 200

Query:   221 HVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLF 280
             HVENDESWHPL E IY+ L+  T+  RF +PFP+LAYPFYLW+RSPGK GSH+ P+SDLF
Sbjct:   201 HVENDESWHPLPESIYKNLEKTTQMFRFTLPFPMLAYPFYLWNRSPGKQGSHYHPDSDLF 260

Query:   281 VPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGH 340
             +P E+KDV+TST CWTAMAALLV L+FVMGP+Q+LKLYG+PYWIFVMWLD VTYLHHHGH
Sbjct:   261 LPKEKKDVLTSTACWTAMAALLVCLNFVMGPIQMLKLYGIPYWIFVMWLDFVTYLHHHGH 320

Query:   341 EDKLPWYRGKEWSYLRGGLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAA 400
             EDKLPWYRGKEWSYLRGGLTTLDRDYGW NNIHHDIGTHVIHHLFPQIPHYHL+EATEAA
Sbjct:   321 EDKLPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLVEATEAA 380

Query:   401 RPVLGKYYREPKKSGPIPFNLFGDLIRSMSKDHYVSDNGDVVYYQTDPQLNG 452
             +PVLGKYYREPK SGP+P +L G LI+SM +DH+VSD GDVVYY+ DP+LNG
Sbjct:   381 KPVLGKYYREPKNSGPLPLHLLGSLIKSMKQDHFVSDTGDVVYYEADPKLNG 432

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;ISS

GO:0016717 "oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0006633 "fatty acid biosynthetic process" evidence=IMP

GO:0009266 "response to temperature stimulus" evidence=IEP

GO:0042389 "omega-3 fatty acid desaturase activity" evidence=IMP

TAIR|locus:2074628 FAD7 "fatty acid desaturase 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 1647 (584.8 bits), Expect = 2.2e-169, P = 2.2e-169
 Identities = 308/459 (67%), Positives = 341/459 (74%)

Query:     1 MASWVLSECGLKPLPHIFPRPRTGINPSKARFLHSKKSITDLKLPSVKCS-GDFSRD--- 56
             MA+ VLSECG++PLP I+  PR+    +  +F  S  S +  K  S   S G  SRD   
Sbjct:     1 MANLVLSECGIRPLPRIYTTPRSNFLSNNNKFRPSLSS-SSYKTSSSPLSFGLNSRDGFT 59

Query:    57 RNWGLKVSAPLRVAPLEGEDXXXXXXXXXXXXXXXXXXXXXXXXFDPGAPPPFKLADIRA 116
             RNW L VS PL   P+  E                         FDPGAPPPF LADIRA
Sbjct:    60 RNWALNVSTPL-TTPIFEESPLEEDNKQR---------------FDPGAPPPFNLADIRA 103

Query:   117 AIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLYWAAQGTMFWALFVLGH 176
             AIPKHCWVK+PWKS+SY                        PLYW AQGTMFWALFVLGH
Sbjct:   104 AIPKHCWVKNPWKSLSYVVRDVAIVFALAAGAAYLNNWIVWPLYWLAQGTMFWALFVLGH 163

Query:   177 DCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIY 236
             DCGHGSFSND KLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHP+SEKIY
Sbjct:   164 DCGHGSFSNDPKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPMSEKIY 223

Query:   237 RTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWT 296
              TLD  TRF RF +P  +LAYPFYLW+RSPGK GSH+ P+SDLF+P ERKDV+TST CWT
Sbjct:   224 NTLDKPTRFFRFTLPLVMLAYPFYLWARSPGKKGSHYHPDSDLFLPKERKDVLTSTACWT 283

Query:   297 AMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLR 356
             AMAALLV L+F +GP+Q+LKLYG+PYWI VMWLD VTYLHHHGHEDKLPWYRGKEWSYLR
Sbjct:   284 AMAALLVCLNFTIGPIQMLKLYGIPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLR 343

Query:   357 GGLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKKSGP 416
             GGLTTLDRDYG  NNIHHDIGTHVIHHLFPQIPHYHL+EATEAA+PVLGKYYREP KSGP
Sbjct:   344 GGLTTLDRDYGLINNIHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYREPDKSGP 403

Query:   417 IPFNLFGDLIRSMSKDHYVSDNGDVVYYQTDPQLNGSSK 455
             +P +L   L +S+ +DHYVSD G+VVYY+ DP L G  K
Sbjct:   404 LPLHLLEILAKSIKEDHYVSDEGEVVYYKADPNLYGEVK 442

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;ISS;NAS;IDA

GO:0016717 "oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009409 "response to cold" evidence=IMP

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0006633 "fatty acid biosynthetic process" evidence=IMP

GO:0042389 "omega-3 fatty acid desaturase activity" evidence=IGI

GO:0042170 "plastid membrane" evidence=TAS

TAIR|locus:2005508 FAD3 "fatty acid desaturase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 1400 (497.9 bits), Expect = 3.3e-143, P = 3.3e-143
 Identities = 243/350 (69%), Positives = 278/350 (79%)

Query:   101 FDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPLY 160
             FDP A PPFK+ DIRAAIPKHCWVK P +SMSY                        PLY
Sbjct:    26 FDPSAQPPFKIGDIRAAIPKHCWVKSPLRSMSYVVRDIIAVAALAIAAVYVDSWFLWPLY 85

Query:   161 WAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHG 220
             WAAQGT+FWA+FVLGHDCGHGSFS+   LNSVVGH+LHS ILVPYHGWRISHRTHHQNHG
Sbjct:    86 WAAQGTLFWAIFVLGHDCGHGSFSDIPLLNSVVGHILHSFILVPYHGWRISHRTHHQNHG 145

Query:   221 HVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLF 280
             HVENDESW PL E++Y+ L  +TR LR+ +P P+LAYP YL  RSPGK GSHF+P S LF
Sbjct:   146 HVENDESWVPLPERVYKKLPHSTRMLRYTVPLPMLAYPLYLCYRSPGKEGSHFNPYSSLF 205

Query:   281 VPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGH 340
              PSERK + TST CW+ M   L+ LSFV GP+ +LK+YG+PY IFVMWLD VTYLHHHGH
Sbjct:   206 APSERKLIATSTTCWSIMFVSLIALSFVFGPLAVLKVYGVPYIIFVMWLDAVTYLHHHGH 265

Query:   341 EDKLPWYRGKEWSYLRGGLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAA 400
             ++KLPWYRGKEWSYLRGGLTT+DRDYG FNNIHHDIGTHVIHHLFPQIPHYHL++AT+AA
Sbjct:   266 DEKLPWYRGKEWSYLRGGLTTIDRDYGIFNNIHHDIGTHVIHHLFPQIPHYHLVDATKAA 325

Query:   401 RPVLGKYYREPKKSGPIPFNLFGDLIRSMSKDHYVSDNGDVVYYQTDPQL 450
             + VLG+YYREPK SG IP +L   L+ S+ KDHYVSD GD+V+Y+TDP L
Sbjct:   326 KHVLGRYYREPKTSGAIPIHLVESLVASIKKDHYVSDTGDIVFYETDPDL 375

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016717 "oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0080167 "response to karrikin" evidence=IEP

GO:0042389 "omega-3 fatty acid desaturase activity" evidence=IGI;IMP

GO:0005783 "endoplasmic reticulum" evidence=IMP

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=IMP

UNIPROTKB|Q41131 Q41131 "Oleate 12-hydroxylase" [Ricinus communis (taxid:3988)]

 Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
 Identities = 116/324 (35%), Positives = 167/324 (51%)

Query:   103 PGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXPL--- 159
             P   PPF L D++ AIP HC+ +   +S SY                        PL   
Sbjct:    29 PHTKPPFTLGDLKRAIPPHCFERSFVRSFSYVAYDVCLSFLFYSIATNFFPYISSPLSYV 88

Query:   160 ----YWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTH 215
                 YW  QG +   L+V+GH+CGH +FS     + +VG ++HS++LVPY  W+ SHR H
Sbjct:    89 AWLVYWLFQGCILTGLWVIGHECGHHAFSEYQLADDIVGLIVHSALLVPYFSWKYSHRRH 148

Query:   216 HQNHGHVENDESWHPLSE-KI--YRTLDSAT--RFLRFKIPFPLLAYPFYLWSRSPGKT- 269
             H N G +E DE + P S+ KI  Y    +    R L       LL +P YL     G+  
Sbjct:   149 HSNIGSLERDEVFVPKSKSKISWYSKYSNNPPGRVLTLAATL-LLGWPLYLAFNVSGRPY 207

Query:   270 ---GSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFV 326
                  H+DP   +F   ER  +  + +   A   +L   +   G   ++++YG+P  I  
Sbjct:   208 DRFACHYDPYGPIFSERERLQIYIADLGIFATTFVLYQATMAKGLAWVMRIYGVPLLIVN 267

Query:   327 MWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWFNNIHHDIG-THVIHHLF 385
              +L ++TYL H  H   +P Y   EW +LRG + T+DRDYG  N + H+I  THV HHLF
Sbjct:   268 CFLVMITYLQHT-HP-AIPRYGSSEWDWLRGAMVTVDRDYGVLNKVFHNIADTHVAHHLF 325

Query:   386 PQIPHYHLIEATEAARPVLGKYYR 409
               +PHYH +EAT+A +P++G+YYR
Sbjct:   326 ATVPHYHAMEATKAIKPIMGEYYR 349

GO:0030176 "integral to endoplasmic reticulum membrane" evidence=IDA

TAIR|locus:2099297 FAD2 "fatty acid desaturase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
 Identities = 117/324 (36%), Positives = 167/324 (51%)

Query:   103 PGAPPPFKLADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXX------- 155
             P   PPF + D++ AIP HC+ +   +S SY                             
Sbjct:    25 PCEKPPFSVGDLKKAIPPHCFKRSIPRSFSYLISDIIIASCFYYVATNYFSLLPQPLSYL 84

Query:   156 XXPLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTH 215
               PLYWA QG +   ++V+ H+CGH +FS+   L+  VG + HS +LVPY  W+ SHR H
Sbjct:    85 AWPLYWACQGCVLTGIWVIAHECGHHAFSDYQWLDDTVGLIFHSFLLVPYFSWKYSHRRH 144

Query:   216 HQNHGHVENDESWHPLSE---KIY-RTLDSAT-RFLRFKIPFPLLAYPFYLWSRSPGKT- 269
             H N G +E DE + P  +   K Y + L++   R +   + F +L +P YL     G+  
Sbjct:   145 HSNTGSLERDEVFVPKQKSAIKWYGKYLNNPLGRIMMLTVQF-VLGWPLYLAFNVSGRPY 203

Query:   270 ---GSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFV 326
                  HF PN+ ++   ER  +  S     A+   L   +   G   ++ LYG+P  I  
Sbjct:   204 DGFACHFFPNAPIYNDRERLQIYLSDAGILAVCFGLYRYAAAQGMASMICLYGVPLLIVN 263

Query:   327 MWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWFNNIHHDI-GTHVIHHLF 385
              +L L+TYL H  H   LP Y   EW +LRG L T+DRDYG  N + H+I  THV HHLF
Sbjct:   264 AFLVLITYLQHT-HPS-LPHYDSSEWDWLRGALATVDRDYGILNKVFHNITDTHVAHHLF 321

Query:   386 PQIPHYHLIEATEAARPVLGKYYR 409
               +PHY+ +EAT+A +P+LG YY+
Sbjct:   322 STMPHYNAMEATKAIKPILGDYYQ 345

GO:0005634 "nucleus" evidence=ISM

GO:0005783 "endoplasmic reticulum" evidence=NAS

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0016717 "oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016720 "delta12-fatty acid dehydrogenase activity" evidence=IGI

GO:0045485 "omega-6 fatty acid desaturase activity" evidence=IDA

ASPGD|ASPL0000055218 odeA [Emericella nidulans (taxid:162425)]

 Score = 288 (106.4 bits), Expect = 2.5e-43, Sum P(2) = 2.5e-43
 Identities = 61/155 (39%), Positives = 89/155 (57%)

Query:   269 TG-SHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPY-WIFV 326
             TG +HF+PNS LF   + K +I S +     A++L  +    G M LL  YG+PY W+  
Sbjct:   273 TGVNHFNPNSPLFEAKDAKLIILSDIGLAITASILYLIGSKFGWMNLLVWYGIPYLWVN- 331

Query:   327 MWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWFNN--IHHDIGTHVIHHL 384
              WL  +TYL H   +  LP Y+ + W++ RG   T+DR++G+     +H  I THV+HH 
Sbjct:   332 HWLVAITYLQHT--DPTLPHYQPESWTFARGAAATIDREFGFIGRHILHGIIETHVLHHY 389

Query:   385 FPQIPHYHLIEATEAARPVLGKYYREPKKSGPIPF 419
                IP YH  EA+EA + V+G +YR    +GP+ F
Sbjct:   390 VSTIPFYHADEASEAIKKVMGSHYRSEAHTGPLGF 424

GO:0006633 "fatty acid biosynthetic process" evidence=IMP

GO:0043936 "asexual sporulation resulting in formation of a cellular spore" evidence=IMP

GO:0071398 "cellular response to fatty acid" evidence=IEP

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016717 "oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

WB|WBGene00001394 fat-2 [Caenorhabditis elegans (taxid:6239)]

 Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
 Identities = 115/307 (37%), Positives = 159/307 (51%)

Query:   111 LADIRAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXX----XPLYWAAQGT 166
             +A ++AAIP+HC+VKDP  S+SY                              YWA  G 
Sbjct:    25 VAAVKAAIPEHCFVKDPLTSISYLIKDYVLLAGLYFAVPYIEHYLGWIGLLGWYWA-MGI 83

Query:   167 MFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDE 226
             +  ALF +GHDCGHGSFS+   LN + GHL H+ IL P+  W+ SHR HHQ   HVE D+
Sbjct:    84 VGSALFCVGHDCGHGSFSDYEWLNDLCGHLAHAPILAPFWPWQKSHRQHHQYTSHVEKDK 143

Query:   227 SWHP-LSEKIYRTLDSATRFLRFKIPFP--LLAYPFYLWSRSPGKTGSHFDPNSDLFVPS 283
               HP ++E+ Y    +  ++    IP    L   P Y     P   GSHF P S LF  +
Sbjct:   144 G-HPWVTEEDYNNRTAIEKYFAV-IPISGWLRWNPIYTIVGLPD--GSHFWPWSRLFETT 199

Query:   284 ERKDVITSTVCWTAMAALLVGLSFVMGPMQL---LKLYGLPYWIFVMWLDLVTYLHHHGH 340
             E  D +   V   A  A+   ++FV+    +   +K Y +P     + L ++TYL H  +
Sbjct:   200 E--DRVKCAVSGVA-CAICAYIAFVLCDYSVYTFVKYYYIPLLFQGLILVIITYLQHQ-N 255

Query:   341 EDKLPWYRGKEWSYLRGGLTTLDRDYGW-FNNIHHDIGT-HVIHHLF-PQIPHYHLIEAT 397
             ED +  Y   EW ++RG   T+DR +G+  +NI H+I   HV HH F  +IPHYHL+EAT
Sbjct:   256 ED-IEVYEADEWGFVRGQTQTIDRHWGFGLDNIMHNITNGHVAHHFFFTKIPHYHLLEAT 314

Query:   398 EAARPVL 404
              A +  L
Sbjct:   315 PAIKKAL 321

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0016717 "oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0006898 "receptor-mediated endocytosis" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0035188 "hatching" evidence=IMP

GO:0018991 "oviposition" evidence=IMP

GO:0019915 "lipid storage" evidence=IMP

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0040018 "positive regulation of multicellular organism growth" evidence=IMP

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=IMP

GO:0004768 "stearoyl-CoA 9-desaturase activity" evidence=IDA

GO:0040002 "collagen and cuticulin-based cuticle development" evidence=IMP

GO:0030497 "fatty acid elongation" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

GO:0016720 "delta12-fatty acid dehydrogenase activity" evidence=IMP

ASPGD|ASPL0000066189 an2 [Emericella nidulans (taxid:162425)]

 Score = 276 (102.2 bits), Expect = 3.0e-40, Sum P(2) = 3.0e-40
 Identities = 59/147 (40%), Positives = 88/147 (59%)

Query:   268 KTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPY-WIFV 326
             ++ SHFDP S L+  ++R  +  S +    +AA    L+  +G ++++ +Y +PY W+  
Sbjct:   208 QSASHFDPGSSLWTENQRHLIAISDLGLLLVAAANWYLAQQVGVLRMVLIYVVPYFWVH- 266

Query:   327 MWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWFNN--IHHDIGTHVIHHL 384
              WL  +TYLHH  H   +P Y    W++ +G L+T+DRD+G+      HH I  HV+HHL
Sbjct:   267 HWLVAITYLHHT-HPS-IPHYTDSTWTFTKGALSTVDRDFGFIGRHFFHHIIDHHVVHHL 324

Query:   385 FPQIPHYHLIEATEAARPVLGK-YYRE 410
             F +IP YH  EAT A  PVLG  Y+RE
Sbjct:   325 FNRIPFYHAEEATNAIIPVLGDMYHRE 351

GO:0006633 "fatty acid biosynthetic process" evidence=IMP

GO:0005575 "cellular_component" evidence=ND

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

WB|WBGene00001393 fat-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
 Identities = 107/298 (35%), Positives = 142/298 (47%)

Query:   115 RAAIPKHCWVKDPWKSMSYXXXXXXXXXXXXXXXXXXXXXXXXP-LYWAA-QGTMFWALF 172
             R AIP HC+ +D  KS+ Y                          L W    G   +ALF
Sbjct:    60 RRAIPAHCFERDLVKSIRYLVQDFAALTILYFALPAFEYFGLFGYLVWNIFMGVFGFALF 119

Query:   173 VLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLS 232
             V+GHDC HGSFS++  LN  +GH+  S +  PY  W+ SH+ HH    H++ D     + 
Sbjct:   120 VVGHDCLHGSFSDNQNLNDFIGHIAFSPLFSPYFPWQKSHKLHHAFTNHIDKDHGHVWIQ 179

Query:   233 EKIYRTLDSATRFLRFKIPFP--LLAYPFY-LWSRSPGKTGSHFDPNSDLFVP-SERKDV 288
             +K +  + S  R+    IPF   L  +P Y L+    G   SHF P S LFV  SER   
Sbjct:   180 DKDWEAMPSWKRWFN-PIPFSGWLKWFPVYTLFGFCDG---SHFWPYSSLFVRNSERVQC 235

Query:   289 ITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYR 348
             + S +C    A   + L+           Y +P   F + L +VTYL H   +D    Y 
Sbjct:   236 VISGICCCVCA--YIALTIAGSYSNWFWYYWVPLSFFGLMLVIVTYLQHV--DDVAEVYE 291

Query:   349 GKEWSYLRGGLTTLDRDYGWF--NNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVL 404
               EWS++RG   T+DR YG      +HH    HV HH F +IPHYHLIEATE  + VL
Sbjct:   292 ADEWSFVRGQTQTIDRYYGLGLDTTMHHITDGHVAHHFFNKIPHYHLIEATEGVKKVL 349

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=IMP

GO:0042389 "omega-3 fatty acid desaturase activity" evidence=IMP

CGD|CAL0003001 FAD2 [Candida albicans (taxid:5476)]

 Score = 230 (86.0 bits), Expect = 1.9e-31, Sum P(2) = 1.9e-31
 Identities = 56/177 (31%), Positives = 92/177 (51%)

Query:   271 SHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLD 330
             +HF+PNS +F   +   ++ S +        L       G   LL  Y LPY++   WL 
Sbjct:   254 NHFNPNSLIFDKKDYWYILLSDLGILLQFFNLYVWYQSFGGFNLLVNYVLPYFLVNHWLV 313

Query:   331 LVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWFN-NIHHDI-GTHVIHHLFPQI 388
              +TYL H   + ++P Y   +W++ RG   T+DR++G+   +I HDI  THV+HH   +I
Sbjct:   314 FITYLQHS--DPQMPHYEASQWTFARGAAATIDREFGFVGKHIFHDIIETHVLHHYVSRI 371

Query:   389 PHYHLIEATEAARPVLGKYYREPKKSGPIPFNLFGDLIRSMSKDHYVSDNGDVVYYQ 445
             P Y+  EA+EA + V+G +Y+   +      N++  L +S     +V  N  V+ Y+
Sbjct:   372 PFYNAREASEAIKKVMGIHYQHSDE------NMWVSLWKSARWCQFVDGNNGVLMYR 422

GO:0005575 "cellular_component" evidence=ND

GO:0016720 "delta12-fatty acid dehydrogenase activity" evidence=IMP

GO:0009405 "pathogenesis" evidence=IMP

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P46310	FAD3C_ARATH	1, ., 1, 4, ., 1, 9, ., -	0.7117	0.9606	0.9843	no	no
P48620	FAD3C_SESIN	1, ., 1, 4, ., 1, 9, ., -	0.7796	0.9628	0.9843	N/A	no
P48621	FAD3C_SOYBN	1, ., 1, 4, ., 1, 9, ., -	0.7647	0.9781	0.9867	no	no
P48626	FAD3E_TOBAC	1, ., 1, 4, ., 1, 9, ., -	0.7123	0.8118	0.9788	N/A	no
P48624	FAD3E_BRANA	1, ., 1, 4, ., 1, 9, ., -	0.6986	0.8030	0.9582	N/A	no
P48625	FAD3E_SOYBN	1, ., 1, 4, ., 1, 9, ., -	0.7065	0.8052	0.9684	no	no
P32291	FAD3E_VIGRR	1, ., 1, 4, ., 1, 9, ., -	0.7197	0.7964	0.9578	N/A	no
P48619	FAD3C_RICCO	1, ., 1, 4, ., 1, 9, ., -	0.7521	0.9759	0.9695	N/A	no
P48618	FAD3C_BRANA	1, ., 1, 4, ., 1, 9, ., -	0.7568	0.8402	0.9504	N/A	no
P48622	FAD3D_ARATH	1, ., 1, 4, ., 1, 9, ., -	0.7161	0.9365	0.9839	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.14.19	0.691
4th Layer	1.14.19.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	457
PLN02498	450	PLN02498, PLN02498, omega-3 fatty acid desaturase	0.0
PLN02505	381	PLN02505, PLN02505, omega-6 fatty acid desaturase	3e-88
cd03507	222	cd03507, Delta12-FADS-like, The Delta12 Fatty Acid	8e-83
pfam11960	135	pfam11960, DUF3474, Domain of unknown function (DU	5e-78
COG3239	343	COG3239, DesA, Fatty acid desaturase [Lipid metabo	7e-51
PLN02598	421	PLN02598, PLN02598, omega-6 fatty acid desaturase	2e-40
pfam00487	251	pfam00487, FA_desaturase, Fatty acid desaturase	2e-33
cd01060	122	cd01060, Membrane-FADS-like, The membrane fatty ac	6e-15
cd03506	204	cd03506, Delta6-FADS-like, The Delta6 Fatty Acid D	3e-09
cd03511	285	cd03511, Rhizopine-oxygenase-like, This CD include	2e-08
cd03510	175	cd03510, Rhizobitoxine-FADS-like, This CD includes	2e-06
cd03514	207	cd03514, CrtR_beta-carotene-hydroxylase, Beta-caro	0.001

>gnl|CDD|215275 PLN02498, PLN02498, omega-3 fatty acid desaturase

 Score =  889 bits (2300), Expect = 0.0
 Identities = 373/460 (81%), Positives = 398/460 (86%), Gaps = 15/460 (3%)

Query: 1   MASWVLSECGLKPLPHIFPRPRTGI----NPSKARFLHSKKSITDLKLPSVKCSGDFSRD 56
           MASWVLSECGL+PLP I+PRPRTG     N SK RFL S KS    +LP    S   SR+
Sbjct: 1   MASWVLSECGLRPLPRIYPRPRTGFISKNNLSKFRFLPSSKSYK--RLPFDLFSRGCSRE 58

Query: 57  RNWGLKVSAPLRVAPLEGEDEEERINGVNGIGNNKGVEEEEGSEFDPGAPPPFKLADIRA 116
           RNW L VSAPL V   E E++EE +NGV          E+E  EFDPGAPPPF LADIRA
Sbjct: 59  RNWALNVSAPLTVPSGEEEEDEEGVNGVG---------EDEEGEFDPGAPPPFNLADIRA 109

Query: 117 AIPKHCWVKDPWKSMSYVVRDVVVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGH 176
           AIPKHCWVK+PW+SMSYVVRDV VVFGLAAAAAY NNWVVWPLYW AQGTMFWALFVLGH
Sbjct: 110 AIPKHCWVKNPWRSMSYVVRDVAVVFGLAAAAAYFNNWVVWPLYWFAQGTMFWALFVLGH 169

Query: 177 DCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIY 236
           DCGHGSFSN+ KLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIY
Sbjct: 170 DCGHGSFSNNPKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIY 229

Query: 237 RTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWT 296
           ++LD  TR LRF +PFP+LAYPFYLWSRSPGK GSHF P+SDLFVP ERKDVITST CWT
Sbjct: 230 KSLDKVTRTLRFTLPFPMLAYPFYLWSRSPGKKGSHFHPDSDLFVPKERKDVITSTACWT 289

Query: 297 AMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLR 356
           AMAALLV LSFVMGP+Q+LKLYG+PYWIFVMWLD VTYLHHHGHEDKLPWYRGKEWSYLR
Sbjct: 290 AMAALLVCLSFVMGPIQMLKLYGIPYWIFVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLR 349

Query: 357 GGLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKKSGP 416
           GGLTTLDRDYGW NNIHHDIGTHVIHHLFPQIPHYHL+EATEAA+PVLGKYYREPKKSGP
Sbjct: 350 GGLTTLDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYREPKKSGP 409

Query: 417 IPFNLFGDLIRSMSKDHYVSDNGDVVYYQTDPQLNGSSKS 456
           +PF+L G LIRSM +DHYVSD GDVVYYQTDPQL+GSSK 
Sbjct: 410 LPFHLLGSLIRSMKQDHYVSDTGDVVYYQTDPQLSGSSKE 449

Length = 450

>gnl|CDD|178121 PLN02505, PLN02505, omega-6 fatty acid desaturase

 Score =  273 bits (701), Expect = 3e-88
 Identities = 131/326 (40%), Positives = 183/326 (56%), Gaps = 24/326 (7%)

Query: 103 PGAPPPFKLADIRAAIPKHCWVKDPWKSMSYVVRDVVVVFGLA-AAAAYLN------NWV 155
           P + PPF L DI+ AIP HC+ +   +S SY+V D+++   L   A  Y+       ++V
Sbjct: 25  PSSKPPFTLGDIKKAIPPHCFKRSVLRSFSYLVYDLLIAALLYYVATNYIPLLPGPLSYV 84

Query: 156 VWPLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTH 215
            WPLYWAAQG +   ++V+ H+CGH +FS+   L+  VG +LHS++LVPY  W+ SHR H
Sbjct: 85  AWPLYWAAQGCVLTGVWVIAHECGHHAFSDYQWLDDTVGLVLHSALLVPYFSWKYSHRRH 144

Query: 216 HQNHGHVENDESWHPLSEKIYRTLDSATRFLR------FKIPFPL-LAYPFYL----WSR 264
           H N G +E DE + P   K    L   +++L         I   L L +P YL      R
Sbjct: 145 HSNTGSLERDEVFVP---KKKSALPWYSKYLNNPPGRLLHIVVQLTLGWPLYLAFNVSGR 201

Query: 265 SPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWI 324
              +   HFDP S +F   ER  +  S     A++  L  L+   G   +L +YG+P  I
Sbjct: 202 PYDRFACHFDPYSPIFNDRERLQIYISDAGILAVSFGLYRLAAAKGLAWVLCVYGVPLLI 261

Query: 325 FVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWFNNIHHDIG-THVIHH 383
              +L L+TYL H      LP Y   EW +LRG L T+DRDYG  N + H+I  THV HH
Sbjct: 262 VNAFLVLITYLQH--THPALPHYDSSEWDWLRGALATVDRDYGILNKVFHNITDTHVAHH 319

Query: 384 LFPQIPHYHLIEATEAARPVLGKYYR 409
           LF  +PHYH +EAT+A +P+LG+YY+
Sbjct: 320 LFSTMPHYHAMEATKAIKPILGEYYQ 345

Length = 381

>gnl|CDD|239584 cd03507, Delta12-FADS-like, The Delta12 Fatty Acid Desaturase (Delta12-FADS)-like CD includes the integral-membrane enzymes, delta-12 acyl-lipid desaturases, oleate 12-hydroxylases, omega3 and omega6 fatty acid desaturases, and other related proteins, found in a wide range of organisms including higher plants, green algae, diatoms, nematodes, fungi, and bacteria

 Score =  254 bits (650), Expect = 8e-83
 Identities = 105/273 (38%), Positives = 147/273 (53%), Gaps = 55/273 (20%)

Query: 125 KDPWKSMSYVVRDVVVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGHDCGHGSFS 184
           +  ++S+SY+  D++++  LA AA+ L +W +WPLYW  QG     LFVLGHDCGHGSFS
Sbjct: 1   RSLFRSLSYLAPDILLLALLALAASLLLSWWLWPLYWIVQGLFLTGLFVLGHDCGHGSFS 60

Query: 185 NDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTLDSATR 244
           ++ +LN +VGH+LHS +LVPYH WRISH  HH + G++E DE W P++E+ Y  L     
Sbjct: 61  DNRRLNDIVGHILHSPLLVPYHSWRISHNRHHAHTGNLEGDEVWVPVTEEEYAELPKRLP 120

Query: 245 FLRFKIPF--PLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALL 302
           +  ++ PF    L +P+YL                                         
Sbjct: 121 YRLYRNPFLMLSLGWPYYLL---------------------------------------- 140

Query: 303 VGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGL--T 360
                    + +L  Y +PY +   WL L+TYL H   +  +PWYR  EW++ + GL  T
Sbjct: 141 ---------LNVLLYYLIPYLVVNAWLVLITYLQHTFPD--IPWYRADEWNFAQAGLLGT 189

Query: 361 TLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHL 393
                 GW N + H IGTHV HHLFP+IPHY+L
Sbjct: 190 VDRDYGGWLNWLTHIIGTHVAHHLFPRIPHYNL 222

The expression of these proteins appears to be temperature dependent: decreases in temperature result in increased levels of fatty acid desaturation within membrane lipids subsequently altering cell membrane fluidity. An important enzyme for the production of polyunsaturates in plants is the oleate delta-12 desaturase (Arabidopsis FAD2) of the endoplasmic reticulum. This enzyme accepts l-acyl-2-oleoyl-sn-glycero-3-phosphocholine as substrate and requires NADH:cytochrome b oxidoreductase, cytochrome b, and oxygen for activity. FAD2 converts oleate(18:1) to linoleate (18:2) and is closely related to oleate 12-hydroxylase which catalyzes the hydroxylation of oleate to ricinoleate. Plastid-bound desaturases (Arabidopsis delta-12 desaturase (FAD6), omega-3 desaturase (FAD8), omega-6 desaturase (FAD6)), as well as, the cyanobacterial thylakoid-bound FADSs require oxygen, ferredoxin, and ferredoxin oxidoreductase for activity. As in higher plants, the cyanobacteria delta-12 (DesA) and omega-3 (DesB) FADSs desaturate oleate (18:1) to linoleate (18:2) and linoleate (18:2) to linolenate (18:3), respectively. Omega-3 (DesB/FAD8) and omega-6 (DesD/FAD6) desaturases catalyze reactions that introduce a double bond between carbons three and four, and carbons six and seven, respectively, from the methyl end of fatty acids. As with other members of this superfamily, this domain family has extensive hydrophobic regions that would be capable of spanning the membrane bilayer at least twice. Comparison of sequences also reveals the existence of three regions of conserved histidine cluster motifs that contain eight histidine residues: HXXXH, HXX(X)HH, and HXXHH. These histidine residues are reported to be catalytically essential and proposed to be the ligands for the iron atoms contained within the homologue, stearoyl CoA desaturase. Mutation of any one of four of these histidines in the Synechocystis delta-12 acyl-lipid desaturase resulted in complete inactivity. Length = 222

>gnl|CDD|221342 pfam11960, DUF3474, Domain of unknown function (DUF3474)

 Score =  238 bits (609), Expect = 5e-78
 Identities = 96/150 (64%), Positives = 102/150 (68%), Gaps = 19/150 (12%)

Query: 1   MASWVLSECGLKPLPHIFPRPRTGI----NPSKARFLHSKKSITDLKLPSVKCSGDFSRD 56
           MASWVLSECGL+PLP I+PRPRTG     NPSK R L S KS       S        R 
Sbjct: 1   MASWVLSECGLRPLPRIYPRPRTGFVSNSNPSKLRPLPSSKSR---NGDSSLPLSSGLRR 57

Query: 57  RNWGLKVSAPLRVAPLEGEDEEERINGVNGIGNNKGVEEEEGSEFDPGAPPPFKLADIRA 116
           RNW L VSAPLRV  +E E+EE             G +EEE  EFDPGAPPPFKLADIRA
Sbjct: 58  RNWALNVSAPLRVQSVEEEEEE------------NGNDEEEEEEFDPGAPPPFKLADIRA 105

Query: 117 AIPKHCWVKDPWKSMSYVVRDVVVVFGLAA 146
           AIPKHCWVKDPW+SMSYVVRDV VVFGLAA
Sbjct: 106 AIPKHCWVKDPWRSMSYVVRDVAVVFGLAA 135

This presumed domain is functionally uncharacterized. This domain is found in bacteria and eukaryotes. This domain is typically between 126 to 140 amino acids in length. This domain is found associated with pfam00487. Length = 135

>gnl|CDD|225779 COG3239, DesA, Fatty acid desaturase [Lipid metabolism]

 Score =  175 bits (445), Expect = 7e-51
 Identities = 85/316 (26%), Positives = 127/316 (40%), Gaps = 26/316 (8%)

Query: 107 PPFKLADIRAAIPKHCWVKDPWKSMSYVVRDVVVVFGLAAAAAYLNNWVVWPLYWAAQGT 166
               L  IRA +PK    +D    +   +    +   LA + AY  +W + PL     G 
Sbjct: 14  LAAPLDSIRARLPKPRTRRDAIAILITFLALAGLWALLALSLAYWPSWWLLPLALLLAGL 73

Query: 167 MFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDE 226
           +   LF +GHDCGHGSF  +  +N ++GHL  + +L P   WRISH  HH +   +++D 
Sbjct: 74  LLTGLFSVGHDCGHGSFFKNRWINDLIGHLAAALLLAPPVFWRISHNQHHAHTNILDDDP 133

Query: 227 SWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERK 286
                    Y +     R       F L+  P+  +   P     HF+    LF  S + 
Sbjct: 134 E-------TYVSYPEQLRRGPL--RFQLIRLPWLAFGFGPRWALLHFELLEKLFKRSGKA 184

Query: 287 DVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPW 346
               +     A   L   L+             +P  +  +WL LV ++HH    D LP 
Sbjct: 185 PKAAALATLLAAIGLAALLALAFFWG------LIPLLLVGLWLVLVLFVHH--TFDLLPH 236

Query: 347 YRGKEWSYLRGGL-TTLDRDYGW-FNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVL 404
           +  ++W +    L    + D       +  +I  HV HHLFP +P Y L  A    +  L
Sbjct: 237 HGLEDWQWSDRALNARSNVDAPPLLRFLTGNINYHVEHHLFPDVPWYRLPRAHRLIKEAL 296

Query: 405 G-------KYYREPKK 413
           G         YRE K 
Sbjct: 297 GERGLTIYTGYREFKL 312

Length = 343

>gnl|CDD|215323 PLN02598, PLN02598, omega-6 fatty acid desaturase

 Score =  149 bits (377), Expect = 2e-40
 Identities = 92/309 (29%), Positives = 144/309 (46%), Gaps = 15/309 (4%)

Query: 106 PPPFKLADIRAAIPKHCWVKDPWKSMSYVVRDVV-VVFGLAAAAAYLNNWVVWPLYWAAQ 164
           P    L D+   +PK  +  D +K+   V   V     GLAA A  +  W + PL WA  
Sbjct: 75  PDNVTLKDVVKTLPKEVFEIDDFKAWKTVAITVTSYALGLAAIA--VAPWYLLPLAWAWL 132

Query: 165 GTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVEN 224
           GT     FV+GHDCGH SFS +  +  +VG +  + ++ P+  WRI H THH +   +  
Sbjct: 133 GTAITGFFVIGHDCGHNSFSKNQLVEDIVGTIAFTPLIYPFEPWRIKHNTHHAHTNKLVM 192

Query: 225 DESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSE 284
           D +W P     +   D+A    +  +   +   P + W+        HFD N   F P E
Sbjct: 193 DTAWQPFRPHQF---DNADPLRKAMMRAGM--GPLWWWASIGHWLFWHFDLNK--FRPQE 245

Query: 285 RKDVITSTVCWTA-MAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDK 343
              V  S     A MA  L  L +  GP+  +K + +P+  +  W+   T +HH      
Sbjct: 246 VPRVKISLAAVFAFMALGLPPLLYTTGPVGFVKWWLMPWLGYHFWMSTFTMVHHTA--PH 303

Query: 344 LPWYRGKEWSYLRGGLT-TLDRDY-GWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAAR 401
           +P+ + +EW+  +  L  T+  DY  W   + HDI  H+ HH+  +IP Y+L +A  + +
Sbjct: 304 IPFKQAREWNAAQAQLNGTVHCDYPAWIEFLCHDISVHIPHHISSKIPSYNLRKAHASLQ 363

Query: 402 PVLGKYYRE 410
              GK+  +
Sbjct: 364 ENWGKHLNK 372

Length = 421

>gnl|CDD|215943 pfam00487, FA_desaturase, Fatty acid desaturase

 Score =  126 bits (317), Expect = 2e-33
 Identities = 59/256 (23%), Positives = 87/256 (33%), Gaps = 13/256 (5%)

Query: 153 NWVVWPLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISH 212
           +W++  L     G +   L  L H+  HG+     +LN ++G LL   + + Y  WRISH
Sbjct: 2   SWLLLLLALLLAGLLLGILGGLAHEAAHGALFRSRRLNDLLGRLLALLLGISYSAWRISH 61

Query: 213 RTHHQNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSH 272
             HH +  +   D          Y          R    F L      L           
Sbjct: 62  LRHHHHTNNPGKDPDSARRRLLRYALRRRLLGLGRLLYRFLLGVLLGLLVFL-------F 114

Query: 273 FDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLV 332
                 L     R  +        A+   L  L   +G    L L+ LP  + +  L LV
Sbjct: 115 RFRRRRLRKRRRRFRIRLLL--LLALLLALALLLAGLGGWGALLLFLLPLLLALTLLLLV 172

Query: 333 TYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYH 392
            YL H+G    L     +              +    N +  ++  H+ HHLFP +P Y 
Sbjct: 173 NYLEHYG----LDTEPERAARTWYERQLVTTSNSWVLNWLTGNLNYHIEHHLFPGVPWYR 228

Query: 393 LIEATEAARPVLGKYY 408
           L E     R  L +Y 
Sbjct: 229 LPELHRRLREELPEYG 244

Length = 251

>gnl|CDD|238511 cd01060, Membrane-FADS-like, The membrane fatty acid desaturase (Membrane_FADS)-like CD includes membrane FADSs, alkane hydroxylases, beta carotene ketolases (CrtW-like), hydroxylases (CrtR-like), and other related proteins

 Score = 71.0 bits (174), Expect = 6e-15
 Identities = 24/76 (31%), Positives = 32/76 (42%), Gaps = 3/76 (3%)

Query: 154 WVVWPLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHR 213
            ++  L     G     L VL H+ GH SF     LN ++G LL  ++   Y  WR SHR
Sbjct: 1   LLLALLLGLLGG---LGLTVLAHELGHRSFFRSRWLNRLLGALLGLALGGSYGWWRRSHR 57

Query: 214 THHQNHGHVENDESWH 229
            HH+       D    
Sbjct: 58  RHHRYTNTPGKDPDSA 73

They are present in all groups of organisms with the exception of archaea. Membrane FADSs are non-heme, iron-containing, oxygen-dependent enzymes involved in regioselective introduction of double bonds in fatty acyl aliphatic chains. They play an important role in the maintenance of the proper structure and functioning of biological membranes. Alkane hydroxylases are bacterial, integral-membrane di-iron enzymes that share a requirement for iron and oxygen for activity similar to that of membrane FADSs, and are involved in the initial oxidation of inactivated alkanes. Beta-carotene ketolase and beta-carotene hydroxylase are carotenoid biosynthetic enzymes for astaxanthin and zeaxanthin, respectively. This superfamily domain has extensive hydrophobic regions that would be capable of spanning the membrane bilayer at least twice. Comparison of these sequences also reveals three regions of conserved histidine cluster motifs that contain eight histidine residues: HXXX(X)H, HXX(X)HH, and HXXHH (an additional conserved histidine residue is seen between clusters 2 and 3). Spectroscopic and genetic evidence point to a nitrogen-rich coordination environment located in the cytoplasm with as many as eight histidines coordinating the two iron ions and a carboxylate residue bridging the two metals in the Pseudomonas oleovorans alkane hydroxylase (AlkB). In addition, the eight histidine residues are reported to be catalytically essential and proposed to be the ligands for the iron atoms contained within the rat stearoyl CoA delta-9 desaturase. Length = 122

>gnl|CDD|239583 cd03506, Delta6-FADS-like, The Delta6 Fatty Acid Desaturase (Delta6-FADS)-like CD includes the integral-membrane enzymes: delta-4, delta-5, delta-6, delta-8, delta-8-sphingolipid, and delta-11 desaturases found in vertebrates, higher plants, fungi, and bacteria

 Score = 56.5 bits (137), Expect = 3e-09
 Identities = 50/245 (20%), Positives = 79/245 (32%), Gaps = 53/245 (21%)

Query: 167 MFWALFV-LGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVEND 225
           +FWA    L HD GHG    +  LN ++G  + + +      W+  H  HH     + +D
Sbjct: 9   LFWAQGGFLAHDAGHGQVFKNRWLNKLLGLTVGNLLGASAGWWKNKHNVHHAYTNILGHD 68

Query: 226 ESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSER 285
                         D  T  L  +            +         HF      F P   
Sbjct: 69  -------------PDIDTLPLLARSEPAFGKDQKKRFLHR----YQHF-----YFFP--- 103

Query: 286 KDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHE-DKL 344
                       + ALL+    V                  +WL +V  L+H G   +  
Sbjct: 104 ------------LLALLLLAFLV------------VQLAGGLWLAVVFQLNHFGMPVEDP 139

Query: 345 PWYRGKEWSYLRGGLTTLDRDYGWFNNIHH-DIGTHVIHHLFPQIPHYHLIEATEAARPV 403
           P     +W   R  LTT +     F +  H  +   + HHLFP +P ++  +     R +
Sbjct: 140 PGESKNDW-LERQVLTTRNITGSPFLDWLHGGLNYQIEHHLFPTMPRHNYPKVAPLVREL 198

Query: 404 LGKYY 408
             K+ 
Sbjct: 199 CKKHG 203

These desaturases are required for the synthesis of highly unsaturated fatty acids (HUFAs), which are mainly esterified into phospholipids and contribute to maintaining membrane fluidity. While HUFAs may be required for cold tolerance in bacteria, plants and fish, the primary role of HUFAs in mammals is cell signaling. These enzymes are described as front-end desaturases because they introduce a double bond between the pre-exiting double bond and the carboxyl (front) end of the fatty acid. Various substrates are involved, with both acyl-coenzyme A (CoA) and acyl-lipid desaturases present in this CD. Acyl-lipid desaturases are localized in the membranes of cyanobacterial thylakoid, plant endoplasmic reticulum (ER), and plastid; and acyl-CoA desaturases are present in ER membrane. ER-bound plant acyl-lipid desaturases and acyl-CoA desaturases require cytochrome b5 as an electron donor. Most of the eukaryotic desaturase domains have an adjacent N-terminal cytochrome b5-like domain. This domain family has extensive hydrophobic regions that would be capable of spanning the membrane bilayer at least twice. Comparison of sequences also reveals the existence of three regions of conserved histidine cluster motifs that contain the residues: HXXXH, HXX(X)HH, and Q/HXXHH. These histidine residues are reported to be catalytically essential and proposed to be the ligands for the iron atoms contained within the homolog, stearoyl CoA desaturase. Length = 204

>gnl|CDD|239588 cd03511, Rhizopine-oxygenase-like, This CD includes the putative hydrocarbon oxygenase, MocD, a bacterial rhizopine (3-O-methyl-scyllo-inosamine, 3-O-MSI) oxygenase, and other related proteins

 Score = 55.1 bits (133), Expect = 2e-08
 Identities = 62/278 (22%), Positives = 96/278 (34%), Gaps = 40/278 (14%)

Query: 143 GLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSIL 202
                 A+          +   G ++ ALF   H+C HG+      LN  VG +    IL
Sbjct: 30  VSGILIAWTWGSWWALPAFLVYGVLYAALFARWHECVHGTAFATRWLNDAVGQIAGLMIL 89

Query: 203 VPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLW 262
           +P   +R SH  HH+       D                    L    P  L  Y   L 
Sbjct: 90  LPPDFFRWSHARHHRYTQIPGRDPE------------------LAVPRPPTLREYLLALS 131

Query: 263 S--RSPGKTGSHFDPNSDL-------FVP-SERKDVITSTVCWTAMAALLVGLSFVMGPM 312
                 GK  + F             F+P  ER  V+       A+ A L+ LS  +G  
Sbjct: 132 GLPYWWGKLRTVFRHAFGAVSEAEKPFIPAEERPKVVREARAMLAVYAGLIALSLYLGSP 191

Query: 313 QLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTL-DRDYGWFNN 371
            L+ ++GLP  +    +  +  L  HG   +           LR   TTL +    +   
Sbjct: 192 LLVLVWGLPL-LLGQPILRLFLLAEHGGCPEDAN-------DLRNTRTTLTNPPLRFL-- 241

Query: 372 IHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYR 409
            + ++  H  HH++P +P + L +  E  +  L   Y 
Sbjct: 242 -YWNMPYHAEHHMYPSVPFHALPKLHELIKDDLPVPYP 278

It has been proposed that MocD, MocE (Rieske-like ferredoxin), and MocF (ferredoxin reductase) under the regulation of MocR, act in concert to form a ferredoxin oxygenase system that demethylates 3-O-MSI to form scyllo-inosamine. This domain family appears to be structurally related to the membrane fatty acid desaturases and the alkane hydroxylases. They all share in common extensive hydrophobic regions that would be capable of spanning the membrane bilayer at least twice. Comparison of sequences also reveals the existence of three regions of conserved histidine cluster motifs that contain eight histidine residues: HXXXH, HXXHH, and HXXHH. These histidine residues are reported to be catalytically essential and proposed to be the ligands for the iron atoms contained within homologs, stearoyl CoA desaturase and alkane hydroxylase. Length = 285

>gnl|CDD|239587 cd03510, Rhizobitoxine-FADS-like, This CD includes the dihydrorhizobitoxine fatty acid desaturase (RtxC) characterized in Bradyrhizobium japonicum USDA110, and other related proteins

 Score = 47.7 bits (114), Expect = 2e-06
 Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 1/85 (1%)

Query: 137 DVVVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHL 196
           D +V+    A A    NW+ + L     G    AL +L HD  HG    + +LN  +G+ 
Sbjct: 1   DWLVIAAAVALALAWPNWLAYLLAVLLIGARQRALAILMHDAAHGLLFRNRRLNDFLGNW 60

Query: 197 LHS-SILVPYHGWRISHRTHHQNHG 220
           L +  I      +R SH  HH++ G
Sbjct: 61  LAAVPIFQSLAAYRRSHLKHHRHLG 85

Dihydrorhizobitoxine desaturase is reported to be involved in the final step of rhizobitoxine biosynthesis. This domain family appears to be structurally related to the membrane fatty acid desaturases and the alkane hydroxylases. They all share in common extensive hydrophobic regions that would be capable of spanning the membrane bilayer at least twice. Comparison of sequences also reveals the existence of three regions of conserved histidine cluster motifs that contain eight histidine residues: HXXXH, HXX(X)HH, and HXXHH. These histidine residues are reported to be catalytically essential and proposed to be the ligands for the iron atoms contained within homologs, stearoyl CoA desaturase and alkane hydroxylase. Length = 175

>gnl|CDD|239591 cd03514, CrtR_beta-carotene-hydroxylase, Beta-carotene hydroxylase (CrtR), the carotenoid zeaxanthin biosynthetic enzyme catalyzes the addition of hydroxyl groups to the beta-ionone rings of beta-carotene to form zeaxanthin and is found in bacteria and red algae

 Score = 39.7 bits (93), Expect = 0.001
 Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 11/94 (11%)

Query: 140 VVFGLAAAAAYLNNWV----VWPLYWAAQGTMFWALFVLG---HDCGHGSFSNDHKLNSV 192
           ++F ++ A  +L+ W       PL W        +L + G   HD  H + S +  +N +
Sbjct: 1   LLFLISMALVWLSTWGYVISYLPL-WVCFILNTLSLHLAGTVIHDASHKAASRNRWINEL 59

Query: 193 VGHLLHSSILVPYHGWRISHRTHHQNHGHVENDE 226
           +GH+   S       + +  R H Q+H H  + E
Sbjct: 60  IGHV---SAFFLGFPFPVFRRVHMQHHAHTNDPE 90

Carotenoids are important natural pigments; zeaxanthin and lutein are the only dietary carotenoids that accumulate in the macular region of the retina and lens. It is proposed that these carotenoids protect ocular tissues against photooxidative damage. CrtR does not show overall amino acid sequence similarity to the beta-carotene hydroxylases similar to CrtZ, an astaxanthin biosynthetic beta-carotene hydroxylase. However, CrtR does show sequence similarity to the green alga, Haematococcus pluvialis, beta-carotene ketolase (CrtW), which converts beta-carotene to canthaxanthin. Sequences of the CrtR_beta-carotene-hydroxylase domain family, as well as, the CrtW_beta-carotene-ketolase domain family appear to be structurally related to membrane fatty acid desaturases and alkane hydroxylases. They all share in common extensive hydrophobic regions that would be capable of spanning the membrane bilayer at least twice. Comparison of these sequences also reveals three regions of conserved histidine cluster motifs that contain eight histidine residues: HXXXH, HXXHH, and HXXHH. These histidine residues are reported to be catalytically essential and proposed to be the ligands for the iron atoms contained within homologs, stearoyl CoA desaturase and alkane hydroxylase. Length = 207

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	457
PLN02498	450	omega-3 fatty acid desaturase	100.0
PLN02505	381	omega-6 fatty acid desaturase	100.0
PLN02598	421	omega-6 fatty acid desaturase	100.0
cd03507	222	Delta12-FADS-like The Delta12 Fatty Acid Desaturas	100.0
COG3239	343	DesA Fatty acid desaturase [Lipid metabolism]	100.0
cd03511	285	Rhizopine-oxygenase-like This CD includes the puta	100.0
PLN03198	526	delta6-acyl-lipid desaturase; Provisional	100.0
PLN03199	485	delta6-acyl-lipid desaturase-like protein; Provisi	100.0
PF11960	136	DUF3474: Domain of unknown function (DUF3474); Int	100.0
cd03506	204	Delta6-FADS-like The Delta6 Fatty Acid Desaturase	100.0
cd03514	207	CrtR_beta-carotene-hydroxylase Beta-carotene hydro	100.0
cd03508	289	Delta4-sphingolipid-FADS-like The Delta4-sphingoli	99.97
cd03509	288	DesA_FADS-like Fatty acid desaturase protein famil	99.97
PF00487	257	FA_desaturase: Fatty acid desaturase This entry is	99.97
cd03510	175	Rhizobitoxine-FADS-like This CD includes the dihyd	99.97
PLN02579	323	sphingolipid delta-4 desaturase	99.97
cd03513	225	CrtW_beta-carotene-ketolase Beta-carotene ketolase	99.96
KOG4232	430	consensus Delta 6-fatty acid desaturase/delta-8 sp	99.94
KOG2987	324	consensus Fatty acid desaturase [Lipid transport a	99.82
cd03512	314	Alkane-hydroxylase Alkane hydroxylase is a bacteri	99.82
cd01060	122	Membrane-FADS-like The membrane fatty acid desatur	99.7
COG1398	289	OLE1 Fatty-acid desaturase [Lipid metabolism]	98.4
PLN02220	299	delta-9 acyl-lipid desaturase	98.17
KOG1600	321	consensus Fatty acid desaturase [Lipid transport a	97.19
cd03505	178	Delta9-FADS-like The Delta9 Fatty Acid Desaturase	97.05

>PLN02498 omega-3 fatty acid desaturase

Probab=100.00  E-value=3.7e-100  Score=782.23  Aligned_cols=445  Identities=84%  Similarity=1.476  Sum_probs=397.8

Q ss_pred             CccccccccCCCCCCCCCCCCCCCCC---C-CcccccCCccccccCCCCCcccCCCCCCCCcceeEeccccccccCCCch
Q 012763            1 MASWVLSECGLKPLPHIFPRPRTGIN---P-SKARFLHSKKSITDLKLPSVKCSGDFSRDRNWGLKVSAPLRVAPLEGED   76 (457)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (457)
                      ||+|||||||+||||++|++||+++.   | ++.++.+.++..+...+.  ..++++.|+|+|+++||+|++...+++|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (450)
T PLN02498          1 MASWVLSECGLRPLPRIYPRPRTGFISKNNLSKFRFLPSSKSYKRLPFD--LFSRGCSRERNWALNVSAPLTVPSGEEEE   78 (450)
T ss_pred             CchhhhhhccCcccccccCCCccccccCCCccccccccccccccccccc--cccccccccccceeeecccCcccCCCcch
Confidence            99999999999999999999998863   2 245555554332122221  23466779999999999999976565442


Q ss_pred             hhhhhccccCcCCCCCCccccCCCCCCCCCCCCCHHHHHHHccccccccCcchhHHHHHHHHHHHHHHHHHHHHhhhHHH
Q 012763           77 EEERINGVNGIGNNKGVEEEEGSEFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYVVRDVVVVFGLAAAAAYLNNWVV  156 (457)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ir~~ipk~~f~~~~~~s~~~l~~~~~~i~~l~~~a~~~~~w~~  156 (457)
                      +++   ..++.+      .+++.++++.++||||++|||++||+|||++|++|++.|+++|+++++++++++.+.++|++
T Consensus        79 ~~~---~~~~~~------~~~~~~~~~~~~p~~tl~dir~aIP~hcF~~s~~rs~~yv~~d~~vi~~l~~~a~~~~~w~~  149 (450)
T PLN02498         79 DEE---GVNGVG------EDEEGEFDPGAPPPFNLADIRAAIPKHCWVKNPWRSMSYVVRDVAVVFGLAAAAAYFNNWVV  149 (450)
T ss_pred             hhh---hhhhcc------cccccccCCCCCCCCCHHHHHHhCCHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence            321   222221      11234589999999999999999999999999999999999999999888888877788999


Q ss_pred             HHHHHHHHHHHHHHHHhhhcccccCCCcCCChhHHHHHHHHHhccccChhhHhHhhhccccCCCCCCCCCccccccHHHH
Q 012763          157 WPLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIY  236 (457)
Q Consensus       157 ~~l~~~~~G~~~~~l~vl~HD~~Hgs~~~~~~lN~~vG~l~~~~~g~p~~~wr~~H~~HH~~tn~~e~Dpd~~p~~~~~y  236 (457)
                      |+++|+++|++++++++++|||||+++|+++++|+++|++++.++++|+..||.+|+.||++||+.++||++.|.++++|
T Consensus       150 wpl~w~~~G~~~~gL~vl~HDcgHgsf~~~k~lNd~vG~ll~~~ll~py~~Wr~sH~~HH~~Tn~~e~D~~~~P~t~~~y  229 (450)
T PLN02498        150 WPLYWFAQGTMFWALFVLGHDCGHGSFSNNPKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIY  229 (450)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccccccccChHHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCCCCCCCcchHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhchhhhhhHHhhhhhhHHHHHHHHHHhCCCCCccccCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhChhhHHH
Q 012763          237 RTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLK  316 (457)
Q Consensus       237 ~~l~~~~r~~~~~~~~~ll~~p~yl~~r~~~~~~~~f~~~~~~f~~~er~~~~~s~l~~~~~~~~l~~l~~~~g~~~~l~  316 (457)
                      +.++...++.++..++++++||+|++.+..++.++||+|.+++|.++||.++++|.+++++++++++.++..+|++.+++
T Consensus       230 ~~l~~~~~~~~~~~~~~~~g~p~YL~~~~~g~~~sHF~p~s~lF~~~er~~V~~S~~~~~~~~~~l~~l~~~~G~~~~l~  309 (450)
T PLN02498        230 KSLDKVTRTLRFTLPFPMLAYPFYLWSRSPGKKGSHFHPDSDLFVPKERKDVITSTACWTAMAALLVCLSFVMGPIQMLK  309 (450)
T ss_pred             HhccccchHHHHHHHHHHHHHHHHHhhhccCCcCcccCCCcccCChhhhhheeeehHHHHHHHHHHHHHHHHHhHHHHHH
Confidence            98877777777777788899999999999888899999999999999999999999999988888888888899999999


Q ss_pred             HHhHhHHHHHHHHHHhhhhcccCCCCCCCCCCCCcccccccceEeeccccccccccccccCcccchhcCCCCCCCCHHHH
Q 012763          317 LYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEA  396 (457)
Q Consensus       317 ~~llP~li~~~~l~~v~~l~H~g~~~~vp~~~~~ew~~~r~~l~Tid~~~g~ln~l~~ninyHveHHLfP~IP~y~Lp~a  396 (457)
                      +|++|++++++|+.++||+||+++++++|+|+++||++.|++++|+||+|||+|++++||++|++||+||+||+|||+||
T Consensus       310 ~Y~vP~lv~~~WL~~iTyLhHt~~~~~iP~y~~~eWs~~rGaL~TvDR~yg~i~~l~H~I~tHV~HHlf~~IPhYhl~eA  389 (450)
T PLN02498        310 LYGIPYWIFVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLVEA  389 (450)
T ss_pred             HHHHHHHHHHHHHHHhhhhcccCCCCCCCCCCCCCcchhhccceeecCcccchhhhhcCcccchhhhccCCCCCcCHHHH
Confidence            99999999999999999999998888899999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhHHHHHhhhcCCCCCCCchhHHHHHHHHhhccEEEccCCcEEEEecCCCCCCCCCC
Q 012763          397 TEAARPVLGKYYREPKKSGPIPFNLFGDLIRSMSKDHYVSDNGDVVYYQTDPQLNGSSKS  456 (457)
Q Consensus       397 ~~~lkp~l~~~y~e~~~s~~lpy~~~~~l~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~  456 (457)
                      ++++|+++++||+|.++|||+|++++++|||++++|+|++|+|++++||+|+++++++++
T Consensus       390 t~aiK~~lg~yy~e~~~~~~~p~~~~~~l~r~~~~c~~v~~~~~v~~y~~~~~~~~~~~~  449 (450)
T PLN02498        390 TEAAKPVLGKYYREPKKSGPLPFHLLGSLIRSMKQDHYVSDTGDVVYYQTDPQLSGSSKE  449 (450)
T ss_pred             HHHHHHHhHHheecCCCCCCchhHHHHHHHHHhcceEEEeCCCCEEEEeccccccccccC
Confidence            999999999999999999999999999999999999999999999999999999987765

>PLN02505 omega-6 fatty acid desaturase

Probab=100.00  E-value=3.8e-66  Score=527.78  Aligned_cols=339  Identities=40%  Similarity=0.745  Sum_probs=293.8

Q ss_pred             CCCCCCCCCCCHHHHHHHccccccccCcchhHHHHHHHHHHHHHHHHHHH-Hh---h---hHHHHHHHHHHHHHHHHHHH
Q 012763          100 EFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYVVRDVVVVFGLAAAAA-YL---N---NWVVWPLYWAAQGTMFWALF  172 (457)
Q Consensus       100 ~~~~~~~~~~~l~~ir~~ipk~~f~~~~~~s~~~l~~~~~~i~~l~~~a~-~~---~---~w~~~~l~~~~~G~~~~~l~  172 (457)
                      +..|.++|++|++|||++||++||++|++|++.++++|+++++++++++. +.   +   .+++|+++|+++|+++.+++
T Consensus        22 ~~~~~~~p~~tl~~ir~aiP~~~f~~s~~rs~~~v~~d~~~i~~~~~~a~~~~~~~p~~~~~~l~~~~~~~~G~~~~~l~  101 (381)
T PLN02505         22 KRVPSSKPPFTLGDIKKAIPPHCFKRSVLRSFSYLVYDLLIAALLYYVATNYIPLLPGPLSYVAWPLYWAAQGCVLTGVW  101 (381)
T ss_pred             ccCCCCCCCccHHHHHHhCCHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHH
Confidence            45778899999999999999999999999999999999999988776554 22   2   24567888999999999999


Q ss_pred             hhhcccccCCCcCCChhHHHHHHHHHhccccChhhHhHhhhccccCCCCCCCCCccccccHHHHhhchh-----hhhhHH
Q 012763          173 VLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTLDS-----ATRFLR  247 (457)
Q Consensus       173 vl~HD~~Hgs~~~~~~lN~~vG~l~~~~~g~p~~~wr~~H~~HH~~tn~~e~Dpd~~p~~~~~y~~l~~-----~~r~~~  247 (457)
                      +++|||+|+++|+++++|+++|.+++.++++|+..||.+|+.||++||+.++|+++.|.++++++...+     ..++.+
T Consensus       102 vl~HDcgH~s~~~~~~lN~~vG~i~~~~ll~p~~~Wr~~H~~HH~~tn~~~~D~~~~P~~~~~~~~~~~~~~~p~~~~~~  181 (381)
T PLN02505        102 VIAHECGHHAFSDYQWLDDTVGLVLHSALLVPYFSWKYSHRRHHSNTGSLERDEVFVPKKKSALPWYSKYLNNPPGRLLH  181 (381)
T ss_pred             HHHHhhcchhhhCChHHHHHHHHHHHHHHcCCHHHHHHHHHHHhhccCCCCCCccccCcCHHHHhHHHHHhcChHHHHHH
Confidence            999999999999999999999999998999999999999999999999999999999877765542111     122211


Q ss_pred             hhhhhhHHHHHHHHHHhCCC----CCccccCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHhHhHH
Q 012763          248 FKIPFPLLAYPFYLWSRSPG----KTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYW  323 (457)
Q Consensus       248 ~~~~~~ll~~p~yl~~r~~~----~~~~~f~~~~~~f~~~er~~~~~s~l~~~~~~~~l~~l~~~~g~~~~l~~~llP~l  323 (457)
                       ....+.+|||+|++.+..+    +.++||+|.+++|.+++|.++++|.+++++++++++.++...|++.++++|++|++
T Consensus       182 -~~~~~~~G~p~yl~~~~~g~~~~~~~~hf~p~s~lf~~~er~~v~~S~~~i~~~~~~l~~~~~~~G~~~~l~~y~vP~l  260 (381)
T PLN02505        182 -IVVQLTLGWPLYLAFNVSGRPYDRFACHFDPYSPIFNDRERLQIYISDAGILAVSFGLYRLAAAKGLAWVLCVYGVPLL  260 (381)
T ss_pred             -HHHHHHhHHHHHHHhhhcCCCCCcccccCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence             1223457889998765544    23689999999999999999999999888887777777777899999999999999


Q ss_pred             HHHHHHHHhhhhcccCCCCCCCCCCCCcccccccceEeeccccccccccccccC-cccchhcCCCCCCCCHHHHHHHHhH
Q 012763          324 IFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWFNNIHHDIG-THVIHHLFPQIPHYHLIEATEAARP  402 (457)
Q Consensus       324 i~~~~l~~v~~l~H~g~~~~vp~~~~~ew~~~r~~l~Tid~~~g~ln~l~~nin-yHveHHLfP~IP~y~Lp~a~~~lkp  402 (457)
                      +++.|+.++||+||+  ++++|+++++||++.++++.|+|++|+|++++++||+ +|++||++|+||+|||+||++++|+
T Consensus       261 v~~~wlv~itylqHt--~~~ip~~~~~~W~~~rgAl~tvdr~yg~~~~l~h~I~~~Hv~HHl~srIP~Y~l~eA~~aik~  338 (381)
T PLN02505        261 IVNAFLVLITYLQHT--HPALPHYDSSEWDWLRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKP  338 (381)
T ss_pred             HHHHHHHHHHHHhcc--CCCCCccCCCCcChhhccceeccCcchHHHHHHccCCcccchhhccCCCCCCCHHHHHHHHHH
Confidence            999999999999999  4669999999999999999999999999999999996 9999999999999999999999999


Q ss_pred             HHHHhhhcCCCCCCCchhHHHHHHHHhhccEEEccC---CcEEEEecC
Q 012763          403 VLGKYYREPKKSGPIPFNLFGDLIRSMSKDHYVSDN---GDVVYYQTD  447 (457)
Q Consensus       403 ~l~~~y~e~~~s~~lpy~~~~~l~~s~~~~~~~~~~---g~~~~~~~~  447 (457)
                      +++++|++.+++      .+++||++.++|++++++   +++++|++.
T Consensus       339 ~lg~~y~~~~~~------~~~~l~~~~~~C~~v~~~~~~~~v~~~~~~  380 (381)
T PLN02505        339 ILGEYYQFDGTP------VYKALWREAKECIYVEPDEGGKGVFWYNNK  380 (381)
T ss_pred             HhHHHhcCCCCc------HHHHHHHHhcceEEeCcCCCCCceEEEecC
Confidence            999999987642      678999999999999887   478888764

>PLN02598 omega-6 fatty acid desaturase

Probab=100.00  E-value=6.8e-60  Score=487.42  Aligned_cols=328  Identities=27%  Similarity=0.513  Sum_probs=276.3

Q ss_pred             CCCCCCHHHHHHHccccccccCcchhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhcccccCCCc
Q 012763          105 APPPFKLADIRAAIPKHCWVKDPWKSMSYVVRDVVVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGHDCGHGSFS  184 (457)
Q Consensus       105 ~~~~~~l~~ir~~ipk~~f~~~~~~s~~~l~~~~~~i~~l~~~a~~~~~w~~~~l~~~~~G~~~~~l~vl~HD~~Hgs~~  184 (457)
                      .||+||++||+++||++||++|++|++.+++.+++++++.++++ ...+|+.++++++++|+.+.++++++|||+|+++|
T Consensus        74 ~~~~~tl~~i~~aiP~~~F~~s~~rs~~~l~~~i~~~~~~~~~~-~~~~w~~~~l~~~~~G~~~~~l~vl~Hec~H~s~~  152 (421)
T PLN02598         74 LPDNVTLKDVVKTLPKEVFEIDDFKAWKTVAITVTSYALGLAAI-AVAPWYLLPLAWAWLGTAITGFFVIGHDCGHNSFS  152 (421)
T ss_pred             CCCCcCHHHHHHhCCHHHcCCCHHHHHHHHHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCC
Confidence            46899999999999999999999999999999998874444332 33457788899999999999999999999999999


Q ss_pred             CCChhHHHHHHHHHhccccChhhHhHhhhccccCCCCCCCCCccccccHHHHhhchhhhhhHHhhhhhhHHHHHHHHHHh
Q 012763          185 NDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSR  264 (457)
Q Consensus       185 ~~~~lN~~vG~l~~~~~g~p~~~wr~~H~~HH~~tn~~e~Dpd~~p~~~~~y~~l~~~~r~~~~~~~~~ll~~p~yl~~r  264 (457)
                      +++++|+++|.+++.++++|+..||.+|+.||++||+.++|||+.|.++++|+..+.+.++.   . ...+| |+|++.+
T Consensus       153 ~~~~lN~~vG~~~~~~ll~p~~~wr~~H~~HH~~tn~~~~D~~~~p~t~~e~~~~~~~~r~l---~-~~~~G-P~yl~~~  227 (421)
T PLN02598        153 KNQLVEDIVGTIAFTPLIYPFEPWRIKHNTHHAHTNKLVMDTAWQPFRPHQFDNADPLRKAM---M-RAGMG-PLWWWAS  227 (421)
T ss_pred             CCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHccCcCCCCCCCCcCCcCHHHHhhcCHHHHHH---H-HHhHh-HHHHHHh
Confidence            99999999999999999999999999999999999999999999999998988655544432   1 12345 8877764


Q ss_pred             CCCCCccccCCCCCCCCchhhHHHHHHHHHHHHHH-HHHHHHHHHhChhhHHHHHhHhHHHHHHHHHHhhhhcccCCCCC
Q 012763          265 SPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMA-ALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDK  343 (457)
Q Consensus       265 ~~~~~~~~f~~~~~~f~~~er~~~~~s~l~~~~~~-~~l~~l~~~~g~~~~l~~~llP~li~~~~l~~v~~l~H~g~~~~  343 (457)
                      .......||++.  .|++++|.+++++.++.++++ +++..+....|.+.++.+|++|++++++|+++++++||+  +++
T Consensus       228 ~~~~~~~hf~~~--~f~~~er~~v~~S~~~v~~~~~~~l~~~~~~~G~~~~~~~ylvP~Lv~~~wl~~it~lhHt--~p~  303 (421)
T PLN02598        228 IGHWLFWHFDLN--KFRPQEVPRVKISLAAVFAFMALGLPPLLYTTGPVGFVKWWLMPWLGYHFWMSTFTMVHHT--APH  303 (421)
T ss_pred             hhcceeeccCcc--cCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCC
Confidence            422234677654  478888989888887766543 333333456788888999999999999999999999998  456


Q ss_pred             CCCCCCCcccccccceE-eeccccc-cccccccccCcccchhcCCCCCCCCHHHHHHHHhHHHHHhhhcCCCCCCCchhH
Q 012763          344 LPWYRGKEWSYLRGGLT-TLDRDYG-WFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPKKSGPIPFNL  421 (457)
Q Consensus       344 vp~~~~~ew~~~r~~l~-Tid~~~g-~ln~l~~ninyHveHHLfP~IP~y~Lp~a~~~lkp~l~~~y~e~~~s~~lpy~~  421 (457)
                      +|+++.+||++.++++. |++++++ |+++|++|||||++||+||+||+||||+|+++++++++++|+|...       .
T Consensus       304 ip~~~~~eW~~~~~al~~Tv~~~~~~~~~~L~hnIn~HV~HHLfP~IP~Y~lpea~~alk~~~g~~y~~~~~-------~  376 (421)
T PLN02598        304 IPFKQAREWNAAQAQLNGTVHCDYPAWIEFLCHDISVHIPHHISSKIPSYNLRKAHASLQENWGKHLNKATF-------N  376 (421)
T ss_pred             CCccccccccHhhhhhcCceecCCcHHHHHHHcCCccchhhhcCCCCCcchHHHHHHHHHHHhccccccCch-------h
Confidence            99999899999999986 9999886 7799999999999999999999999999999999999999998641       3


Q ss_pred             HHHHHHHhhccEEEccCCcEEEEecCCC
Q 012763          422 FGDLIRSMSKDHYVSDNGDVVYYQTDPQ  449 (457)
Q Consensus       422 ~~~l~~s~~~~~~~~~~g~~~~~~~~~~  449 (457)
                      ++.+++..++|++++++++.+.|++...
T Consensus       377 ~~~l~~~~~~C~~~d~~~~~~~f~~~~~  404 (421)
T PLN02598        377 WRLMKTILTQCHVYDKEKNYVPFDNLAP  404 (421)
T ss_pred             HHHHHHHhhheEEEcCCCCeeeccccCc
Confidence            7789999999988888888888887553

>cd03507 Delta12-FADS-like The Delta12 Fatty Acid Desaturase (Delta12-FADS)-like CD includes the integral-membrane enzymes, delta-12 acyl-lipid desaturases, oleate 12-hydroxylases, omega3 and omega6 fatty acid desaturases, and other related proteins, found in a wide range of organisms including higher plants, green algae, diatoms, nematodes, fungi, and bacteria

Probab=100.00  E-value=4.7e-40  Score=315.52  Aligned_cols=220  Identities=47%  Similarity=0.983  Sum_probs=175.1

Q ss_pred             cCcchhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhcccccCCCcCCChhHHHHHHHHHhccccC
Q 012763          125 KDPWKSMSYVVRDVVVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVP  204 (457)
Q Consensus       125 ~~~~~s~~~l~~~~~~i~~l~~~a~~~~~w~~~~l~~~~~G~~~~~l~vl~HD~~Hgs~~~~~~lN~~vG~l~~~~~g~p  204 (457)
                      ++.++++.+++.|+++++++++++....+|++++++++++|+.+.++++++|||+|+++++++++|+++|.+++.+++.|
T Consensus         1 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~l~He~~H~~~~~~~~~N~~~g~~~~~~~~~p   80 (222)
T cd03507           1 RSLFRSLSYLAPDILLLALLALAASLLLSWWLWPLYWIVQGLFLTGLFVLGHDCGHGSFSDNRRLNDIVGHILHSPLLVP   80 (222)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhhccCCcccccchhHHHHHHHHHHHHHhCC
Confidence            46789999999999998887776655567888888999999999999999999999999999999999999999999999


Q ss_pred             hhhHhHhhhccccCCCCCCCCCccccccHHHHhhchhhhhhHHhhhhhhHHHHHHHHHHhCCCCCccccCCCCCCCCchh
Q 012763          205 YHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSE  284 (457)
Q Consensus       205 ~~~wr~~H~~HH~~tn~~e~Dpd~~p~~~~~y~~l~~~~r~~~~~~~~~ll~~p~yl~~r~~~~~~~~f~~~~~~f~~~e  284 (457)
                      +..||..|+.||+++|+.++|+|+.|..+.++.......+   +.                                   
T Consensus        81 ~~~w~~~H~~HH~~~~~~~~D~~~~p~~~~~~~~~~~~~~---y~-----------------------------------  122 (222)
T cd03507          81 YHSWRISHNRHHAHTGNLEGDEVWVPVTEEEYAELPKRLP---YR-----------------------------------  122 (222)
T ss_pred             hHHHHHHHHHHHhccCCCCCCCcccCcCHHHhhcccccch---HH-----------------------------------
Confidence            9999999999999999999999999877766653221110   00                                   


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHhHhHHHHHHHHHHhhhhcccCCCCCCCCCCCCcccccccce-Eeec
Q 012763          285 RKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGL-TTLD  363 (457)
Q Consensus       285 r~~~~~s~l~~~~~~~~l~~l~~~~g~~~~l~~~llP~li~~~~l~~v~~l~H~g~~~~vp~~~~~ew~~~r~~l-~Tid  363 (457)
                         .....+.+. .++....+  ..+   ++++|++|+++.+.|+.+++++||+  ++++|++++++|++.+.|+ +|+|
T Consensus       123 ---~~~~~~~~~-~~g~~~~~--~~~---~~~~~~ip~l~~~~~l~~~t~l~H~--~~~~~~~~~~~w~~~~~q~~~t~~  191 (222)
T cd03507         123 ---LYRNPFLML-SLGWPYYL--LLN---VLLYYLIPYLVVNAWLVLITYLQHT--FPDIPWYRADEWNFAQAGLLGTVD  191 (222)
T ss_pred             ---HHHHHHHHH-HHHHHHHH--HHH---HHHHHHhHHHHHHHHHHeeeEecCC--CCCCCCcCccccchhhhcceeeee
Confidence               000000000 00000000  111   6779999999999999999999998  3558999888999866666 5888


Q ss_pred             cccc-cccccccccCcccchhcCCCCCCCCH
Q 012763          364 RDYG-WFNNIHHDIGTHVIHHLFPQIPHYHL  393 (457)
Q Consensus       364 ~~~g-~ln~l~~ninyHveHHLfP~IP~y~L  393 (457)
                      ++++ |++++++|+|||+|||+||+||+|||
T Consensus       192 ~~~~~~~~~l~~~i~~hv~HHlfP~iP~y~l  222 (222)
T cd03507         192 RDYGGWLNWLTHIIGTHVAHHLFPRIPHYNL  222 (222)
T ss_pred             ccccHHHHHHhcCCCcccchhcCCCCCcCcC
Confidence            8775 77999999999999999999999986

The expression of these proteins appears to be temperature dependent: decreases in temperature result in increased levels of fatty acid desaturation within membrane lipids subsequently altering cell membrane fluidity. An important enzyme for the production of polyunsaturates in plants is the oleate delta-12 desaturase (Arabidopsis FAD2) of the endoplasmic reticulum. This enzyme accepts l-acyl-2-oleoyl-sn-glycero-3-phosphocholine as substrate and requires NADH:cytochrome b oxidoreductase, cytochrome b, and oxygen for activity. FAD2 converts oleate(18:1) to linoleate (18:2) and is closely related to oleate 12-hydroxylase which cat

>COG3239 DesA Fatty acid desaturase [Lipid metabolism]

Probab=100.00  E-value=9.7e-39  Score=324.41  Aligned_cols=280  Identities=29%  Similarity=0.473  Sum_probs=192.4

Q ss_pred             CCCHHHHHHHccccccccCcchhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhcccccCCCcCCC
Q 012763          108 PFKLADIRAAIPKHCWVKDPWKSMSYVVRDVVVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGHDCGHGSFSNDH  187 (457)
Q Consensus       108 ~~~l~~ir~~ipk~~f~~~~~~s~~~l~~~~~~i~~l~~~a~~~~~w~~~~l~~~~~G~~~~~l~vl~HD~~Hgs~~~~~  187 (457)
                      ..+++++++.+|+.|++++..+....++...++++++.....++++|+.++++++++|+++.++++++|||+||+++|++
T Consensus        15 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~l~~~~~~~~l~~~~~v~Hd~~Hgs~~~~r   94 (343)
T COG3239          15 AAPLDSIRARLPKPRTRRDAIAILITFLALAGLWALLALSLAYWPSWWLLPLALLLAGLLLTGLFSVGHDCGHGSFFKNR   94 (343)
T ss_pred             ccchhhHHhhCccccccccHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhhccccchhhhh
Confidence            45788999999999999988888877777776666655555566668888888888999999999999999999999999


Q ss_pred             hhHHHHHHHHHhccccChhhHhHhhhccccCCCCCCCCCccccccHHHHhhchhhhhhHHhhhhhhHHHHHHHHHHhCCC
Q 012763          188 KLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPG  267 (457)
Q Consensus       188 ~lN~~vG~l~~~~~g~p~~~wr~~H~~HH~~tn~~e~Dpd~~p~~~~~y~~l~~~~r~~~~~~~~~ll~~p~yl~~r~~~  267 (457)
                      |+||++|++++.+.+.|+..||.+|++||++||+.|+|+|.       +...+...+...  ..+.++-.+.+.+...+.
T Consensus        95 ~iNd~ig~l~~~~~~~p~~~wR~~H~~HH~~t~~~~~d~~~-------~~~~~~~~~~~~--l~~~~i~~~~~~~~~~~~  165 (343)
T COG3239          95 WINDLIGHLAAALLLAPPVFWRISHNQHHAHTNILDDDPET-------YVSYPEQLRRGP--LRFQLIRLPWLAFGFGPR  165 (343)
T ss_pred             hHHHHHHHHHHHHHhcChhhhhhhHHHhhcccCCCCCCHHH-------HHhCchhhhhhh--HHHHHHHHHHHHHhhhhh
Confidence            99999999999988899999999999999999998888653       222211111100  001111111111111111


Q ss_pred             CCccccCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHH-hHhHHHHHHHHHHhhhhcccCCCCCCCC
Q 012763          268 KTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLY-GLPYWIFVMWLDLVTYLHHHGHEDKLPW  346 (457)
Q Consensus       268 ~~~~~f~~~~~~f~~~er~~~~~s~l~~~~~~~~l~~l~~~~g~~~~l~~~-llP~li~~~~l~~v~~l~H~g~~~~vp~  346 (457)
                      ....++...+..+.+.++...+.......+.+.+       ..+..+..+| ++|+++.+.|...+++++|. ++ .+++
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-------~~~~~l~~~~~~~p~l~~~~~~~~~~~~~h~-~~-~~~~  236 (343)
T COG3239         166 WALLHFELLEKLFKRSGKAPKAAALATLLAAIGL-------AALLALAFFWGLIPLLLVGLWLVLVLFVHHT-FD-LLPH  236 (343)
T ss_pred             hhhhhhhhhhhccCCcccchHHHHHHHHHHHHHH-------HHHHHHHHHHhHhHHHHHHHHHHHHHHhhcc-cc-cccc
Confidence            1111222212223333333333322222111111       1112223345 68999999999999999998 44 4777


Q ss_pred             CCCCcccccccceE-eeccccc-cccccccccCcccchhcCCCCCCCCHHHHHHHHhHHHH
Q 012763          347 YRGKEWSYLRGGLT-TLDRDYG-WFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLG  405 (457)
Q Consensus       347 ~~~~ew~~~r~~l~-Tid~~~g-~ln~l~~ninyHveHHLfP~IP~y~Lp~a~~~lkp~l~  405 (457)
                      ....+|++...++. |++.+++ +++++++|+|||+|||+||+||+|+||++|+.+++.++
T Consensus       237 ~~~~d~~~~~~~l~~~~~~~~~~~~~~l~~n~nyH~~HHl~P~vP~y~lp~~~~~~~~~~~  297 (343)
T COG3239         237 HGLEDWQWSDRALNARSNVDAPPLLRFLTGNINYHVEHHLFPDVPWYRLPRAHRLIKEALG  297 (343)
T ss_pred             cccccchHHHHHHhccCccCchHHHHHhcCCccccHhhhCCCCCchhhHHHHHHHHHHHcC
Confidence            66677766665554 4455555 67999999999999999999999999999999999888

>cd03511 Rhizopine-oxygenase-like This CD includes the putative hydrocarbon oxygenase, MocD, a bacterial rhizopine (3-O-methyl-scyllo-inosamine, 3-O-MSI) oxygenase, and other related proteins

Probab=100.00  E-value=2.6e-37  Score=307.31  Aligned_cols=267  Identities=19%  Similarity=0.183  Sum_probs=185.0

Q ss_pred             cccccCcchhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhcccccCCCcCCChhHHHHHHHHHhc
Q 012763          121 HCWVKDPWKSMSYVVRDVVVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSS  200 (457)
Q Consensus       121 ~~f~~~~~~s~~~l~~~~~~i~~l~~~a~~~~~w~~~~l~~~~~G~~~~~l~vl~HD~~Hgs~~~~~~lN~~vG~l~~~~  200 (457)
                      ++.++|+++++..++.++++++++++++.+..+++..+++.+++|+.+.+++.++|||+|++++++|++|+++|.+++.+
T Consensus         8 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~He~~H~~~~~~~~~N~~~g~l~~~~   87 (285)
T cd03511           8 QLMQRSDAPGLLDTALWLGALAVSGILIAWTWGSWWALPAFLVYGVLYAALFARWHECVHGTAFATRWLNDAVGQIAGLM   87 (285)
T ss_pred             HHhCCcchhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCchHHHHHHHHHHHH
Confidence            46789999999999999988877665554343343334445678999999999999999999999999999999999899


Q ss_pred             cccChhhHhHhhhccccCCCCCCCCCcccc-ccHHHHhhchhhhhhHHhhh-hhhHHHHHHHHHHhCCCCCccccCCCCC
Q 012763          201 ILVPYHGWRISHRTHHQNHGHVENDESWHP-LSEKIYRTLDSATRFLRFKI-PFPLLAYPFYLWSRSPGKTGSHFDPNSD  278 (457)
Q Consensus       201 ~g~p~~~wr~~H~~HH~~tn~~e~Dpd~~p-~~~~~y~~l~~~~r~~~~~~-~~~ll~~p~yl~~r~~~~~~~~f~~~~~  278 (457)
                      ++.|+..||..|+.||+++|++++|||... .++.       +.+...... ..........++....+..  ... .+.
T Consensus        88 ~~~~~~~~~~~H~~HH~~~~~~~~Dpd~~~~~~~~-------~~~~~~~~~g~~~~~~~l~~~~~~~~~~~--~~~-~~~  157 (285)
T cd03511          88 ILLPPDFFRWSHARHHRYTQIPGRDPELAVPRPPT-------LREYLLALSGLPYWWGKLRTVFRHAFGAV--SEA-EKP  157 (285)
T ss_pred             hcCChHHHHHHHHHHhcCcCCCCCCCCCCCCCchH-------HHHHHHHHhChHHHHHHHHHHHHHHhccc--ccc-cCC
Confidence            999999999999999999999999999742 2211       111111000 0000000000110000000  000 111


Q ss_pred             CCCchhhHHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHhHhHHHHHHHHHHhhhhcccCCCCCCCCCCCCcccccccc
Q 012763          279 LFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGG  358 (457)
Q Consensus       279 ~f~~~er~~~~~s~l~~~~~~~~l~~l~~~~g~~~~l~~~llP~li~~~~l~~v~~l~H~g~~~~vp~~~~~ew~~~r~~  358 (457)
                      .+.++++.+++.+..++++++++++++++..|++.++++|++|++++..++.+++++||.+.++.     +++   .+. 
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~wllP~l~~~~~~~~~~~~eH~~~~~~-----~~~---~~~-  228 (285)
T cd03511         158 FIPAEERPKVVREARAMLAVYAGLIALSLYLGSPLLVLVWGLPLLLGQPILRLFLLAEHGGCPED-----AND---LRN-  228 (285)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcc-----cch---hhh-
Confidence            22234456666676666666666666666778888888999999998888889999999975321     111   111 


Q ss_pred             eEeeccccccccccccccCcccchhcCCCCCCCCHHHHHHHHhHHHHHh
Q 012763          359 LTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKY  407 (457)
Q Consensus       359 l~Tid~~~g~ln~l~~ninyHveHHLfP~IP~y~Lp~a~~~lkp~l~~~  407 (457)
                      .+|+..+ +|++++++|+|||+|||+||+||+|+||++|+.+++.+++.
T Consensus       229 trs~~~~-~~~~~l~~n~nyH~eHHl~P~vP~y~Lp~~h~~L~~~~~~~  276 (285)
T cd03511         229 TRTTLTN-PPLRFLYWNMPYHAEHHMYPSVPFHALPKLHELIKDDLPVP  276 (285)
T ss_pred             hhhhhhh-HHHHHHHcCCchHHHHhcCCCCcHhHHHHHHHHHHHhCCCC
Confidence            2333222 57799999999999999999999999999999999988754

It has been proposed that MocD, MocE (Rieske-like ferredoxin), and MocF (ferredoxin reductase) under the regulation of MocR, act in concert to form a ferredoxin oxygenase system that demethylates 3-O-MSI to form scyllo-inosamine. This domain family appears to be structurally related to the membrane fatty acid desaturases and the alkane hydroxylases. They all share in common extensive hydrophobic regions that would be capable of spanning the membrane bilayer at least twice. Comparison of sequences also reveals the existence of three regions of conserved histidine cluster motifs that contain eight histidine residues: HXXXH, HXXHH, and HXXHH. These histidine residues are reported to be catalytically essential and proposed to be the ligands for the iron atoms contained within homologs, stearoyl CoA d

>PLN03198 delta6-acyl-lipid desaturase; Provisional

Probab=100.00  E-value=8.1e-38  Score=332.06  Aligned_cols=307  Identities=17%  Similarity=0.199  Sum_probs=204.2

Q ss_pred             HHHHHHHcc-ccccccCcchhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhcccccCCCcCCChh
Q 012763          111 LADIRAAIP-KHCWVKDPWKSMSYVVRDVVVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGHDCGHGSFSNDHKL  189 (457)
Q Consensus       111 l~~ir~~ip-k~~f~~~~~~s~~~l~~~~~~i~~l~~~a~~~~~w~~~~l~~~~~G~~~~~l~vl~HD~~Hgs~~~~~~l  189 (457)
                      .+++|+.+. .++|++++.+....++..++++++++++.+...+++..++.++++|+.+.++++++|||+|+++++++++
T Consensus       189 y~~Lr~~~~~~G~fk~~~~~y~~~l~~~i~l~a~~~~~~~~~~~~~~~ll~a~llgl~~~q~g~l~HD~~H~s~~~~~~~  268 (526)
T PLN03198        189 FRDLRALFLREQLFKSSKLYYVFKLLTNIAIFAASIAIICCSKSISAVLASACMMALCFQQCGWLSHDFLHNQVFETRWL  268 (526)
T ss_pred             HHHHHHHHHhccccccCcceeHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCcHH
Confidence            557777754 5899999988777776665555555544433333333455566789999999999999999999999999


Q ss_pred             HHHHHHHHH-hccccChhhHhHhhhccccCCCCCC-----CCCcccccc-----HHHHhhc--hhhhhhHHhhhh--hhH
Q 012763          190 NSVVGHLLH-SSILVPYHGWRISHRTHHQNHGHVE-----NDESWHPLS-----EKIYRTL--DSATRFLRFKIP--FPL  254 (457)
Q Consensus       190 N~~vG~l~~-~~~g~p~~~wr~~H~~HH~~tn~~e-----~Dpd~~p~~-----~~~y~~l--~~~~r~~~~~~~--~~l  254 (457)
                      |+++|.+++ .++|.|+.+||..|+.||.+||..+     +|||+...+     ++..+..  ..+.++.++..+  +++
T Consensus       269 n~~~g~~~~~~~~G~s~~~W~~~Hn~HH~~tN~~~~~~~~~DpDI~~~pl~~~~~~~~~~~~~~~~~~~~~yQh~~f~~l  348 (526)
T PLN03198        269 NEVVGYLIGNAVLGFSTGWWKEKHNLHHAAPNECDQLYQPIDEDIDTLPLIAWSKDILATVENKTFLRILQYQHLFFMAL  348 (526)
T ss_pred             HHHHHHHHHHhhcCCCHHHHHHHHHHhccCCCCCCccCCCCCCCcCccceeEechhhhhcchhhhHHHHHhhhhHHHHHH
Confidence            999999976 5689999999999999999999987     799986543     1111110  011122122111  111


Q ss_pred             H-HHHHHHHHhCCCCCccccCCCCCCCCchhhHHHHHHHHHHHHHHHHHH-HHHHHhChhhHHHHHhHhHHHHHHHHHHh
Q 012763          255 L-AYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLV-GLSFVMGPMQLLKLYGLPYWIFVMWLDLV  332 (457)
Q Consensus       255 l-~~p~yl~~r~~~~~~~~f~~~~~~f~~~er~~~~~s~l~~~~~~~~l~-~l~~~~g~~~~l~~~llP~li~~~~l~~v  332 (457)
                      + ...+.+...+.     .+....+ ..+.++.   ...+..++.+++.+ .+++..+.+..+.++++..++.++++.++
T Consensus       349 l~l~~~~~~~~s~-----~~~~~~~-~~~~~~~---~e~~~~l~~~~~~~~l~l~~~~~~~~l~~~~l~~~~~g~~l~~v  419 (526)
T PLN03198        349 LFFARGSWLFWSW-----RYTSTAK-LAPADRL---LEKGTILFHYFWFIGTACYLLPGWKPLVWMAVTELMCGMLLGFV  419 (526)
T ss_pred             HHHHHHHHHHHHH-----HHHhccc-cchHHHH---HHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhh
Confidence            1 11111100000     0000000 0111221   12222222222222 22334555556777888888999999999


Q ss_pred             hhhcccCCCCCCCCCCCCcccccccceE-eecccc-ccccccccccCcccchhcCCCCCCCCHHHHHHHHhHHHHHhhhc
Q 012763          333 TYLHHHGHEDKLPWYRGKEWSYLRGGLT-TLDRDY-GWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYRE  410 (457)
Q Consensus       333 ~~l~H~g~~~~vp~~~~~ew~~~r~~l~-Tid~~~-g~ln~l~~ninyHveHHLfP~IP~y~Lp~a~~~lkp~l~~~y~e  410 (457)
                      ++++|.+.+  +... .+  +|.+.|+. |.|... .|++||++|+|||+||||||+||++|||+    ++|+++++|+|
T Consensus       420 F~lnH~~~~--v~~~-~~--dw~~~Qv~tT~n~~~~~~~~wf~GGLN~QiEHHLFP~iP~~~l~~----i~piVk~~C~k  490 (526)
T PLN03198        420 FVLSHNGME--VYNK-SK--EFVNAQIVSTRDIKANIFNDWFTGGLNRQIEHHLFPTMPRHNLNK----IAPQVEAFCIK  490 (526)
T ss_pred             hhccccCCC--CCCC-Cc--CHHHHHHhcCcCcCCchHHHHhhcCCcccchhhcCCCCchhhHHH----HhHHHHHHHHH
Confidence            999999643  3322 22  56677774 444332 46799999999999999999999999999    79999999999


Q ss_pred             CCCCCCCchhHHHHHHHHhhcc-EEEccCCc
Q 012763          411 PKKSGPIPFNLFGDLIRSMSKD-HYVSDNGD  440 (457)
Q Consensus       411 ~~~s~~lpy~~~~~l~~s~~~~-~~~~~~g~  440 (457)
                      ++    +||+.. ++++++++. .+|++.|+
T Consensus       491 ~G----lpY~~~-~~~~a~~~~l~~L~~vg~  516 (526)
T PLN03198        491 HG----LVYEDV-SIAAGTCKVLKALKEVAE  516 (526)
T ss_pred             cC----CCCCCC-CHHHHHHHHHHHHHHHHH
Confidence            99    999888 899999998 88888876

>PLN03199 delta6-acyl-lipid desaturase-like protein; Provisional

Probab=100.00  E-value=4e-37  Score=325.72  Aligned_cols=317  Identities=16%  Similarity=0.167  Sum_probs=206.4

Q ss_pred             HHHHHHHcc-ccccccCcchhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhcccccCCCcCCChh
Q 012763          111 LADIRAAIP-KHCWVKDPWKSMSYVVRDVVVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGHDCGHGSFSNDHKL  189 (457)
Q Consensus       111 l~~ir~~ip-k~~f~~~~~~s~~~l~~~~~~i~~l~~~a~~~~~w~~~~l~~~~~G~~~~~l~vl~HD~~Hgs~~~~~~l  189 (457)
                      .+++|+.+. .++|+++++.....++..++++++.+++.++..+++...++++++|+.+.+++.++|||+|+++++++++
T Consensus       114 y~~L~~~v~~~g~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aillg~~~~~~g~l~HDa~H~~~~~~~~~  193 (485)
T PLN03199        114 YRDLRAKLIMMGMFKSNKMFYAYKCLFNMAIWAAACALVFYSDRFAMHIASALLLGLFFQQCGWLAHDFLHHQVFKKRKH  193 (485)
T ss_pred             HHHHHHHHHHcCCCCCCchHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhCCchH
Confidence            457888886 4889999877766555555555555554444556656666777889999999899999999999999999


Q ss_pred             HHHHHHHHH-hccccChhhHhHhhhccccCCCC-------CCCCCccccc-----cHHH---Hhhc-h--hhhhhHHhhh
Q 012763          190 NSVVGHLLH-SSILVPYHGWRISHRTHHQNHGH-------VENDESWHPL-----SEKI---YRTL-D--SATRFLRFKI  250 (457)
Q Consensus       190 N~~vG~l~~-~~~g~p~~~wr~~H~~HH~~tn~-------~e~Dpd~~p~-----~~~~---y~~l-~--~~~r~~~~~~  250 (457)
                      |+++|.+++ +++|.|..+|+..|+.||++||.       .++|||+...     +++.   ++.. .  ......++..
T Consensus       194 N~~~g~~~g~l~~G~S~~wW~~~Hn~HH~~tN~~~~~~~~~~~DPDI~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (485)
T PLN03199        194 GDLGGIFWGDLMQGFSMQWWKNKHNGHHAVPNLHCSSADAQDGDPDIDTMPLLAWSLKQAQSFREINADGKDSGFVKFAI  273 (485)
T ss_pred             HHHHHHHHHHhccCCChHHHHHHHhhhhcCcCcCccccCCCCCCCCCCCCceeeecHHHhhhHhhhhhhccccchhhHHH
Confidence            999998876 56899999999999999999997       4789998522     2111   1111 0  0001111111


Q ss_pred             hhh-HHHHHHHHHH------hC----CCCCccccCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHH-HHH--hChhhHHH
Q 012763          251 PFP-LLAYPFYLWS------RS----PGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGL-SFV--MGPMQLLK  316 (457)
Q Consensus       251 ~~~-ll~~p~yl~~------r~----~~~~~~~f~~~~~~f~~~er~~~~~s~l~~~~~~~~l~~l-~~~--~g~~~~l~  316 (457)
                      .++ ++.+|++.+.      .+    ............+ ..+++........++.++.+++.+.+ ++.  .+++..+.
T Consensus       274 ~~Qh~~~~p~l~l~~l~w~~~s~~~~~~~~~~~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~~~lp~~~~~~~~~~~l~  352 (485)
T PLN03199        274 KFQAFFYFPILLLARISWLNESFKCAFGLGAASENAALE-LEAKGLQYPLLEKAGILLHYAWMFTLSSGFGRFSFAYSAF  352 (485)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccc-cccchhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHH
Confidence            111 1122222111      10    0000000000000 11111122223323333332222222 222  45556677


Q ss_pred             HHhHhHHHHHHHHHHhhhhcccCCCCCCCCCCCCcccccccceE-eeccc------cccccccccccCcccchhcCCCCC
Q 012763          317 LYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLT-TLDRD------YGWFNNIHHDIGTHVIHHLFPQIP  389 (457)
Q Consensus       317 ~~llP~li~~~~l~~v~~l~H~g~~~~vp~~~~~ew~~~r~~l~-Tid~~------~g~ln~l~~ninyHveHHLfP~IP  389 (457)
                      ++++..++.++++.+++.++|.+++  ++. +++.-++.+.|+. |.|..      ..|++||+|++|||+||||||+||
T Consensus       353 ~~~~~~~~~g~~l~~~f~l~H~~~~--~~~-~~~~~d~~~~Qv~TT~n~~~~~~~~s~~~~wf~GGLN~QIEHHLFP~mp  429 (485)
T PLN03199        353 YFFTATASCGFFLAIVFGLGHNGMA--TYD-ADARPDFWKLQVTTTRNIIGGHGFPQAFVDWFCGGLQYQVDHHLFPMLP  429 (485)
T ss_pred             HHHHHHHHHhhHheEEEecCCcccc--ccC-CCCCccHHHHHHHhccCccCCCCCcchHHHHHhccchhhhhhhcCCCCc
Confidence            8888888999999999999999643  222 1222245577774 55543      137799999999999999999999


Q ss_pred             CCCHHHHHHHHhHHHHHhhhcCCCCCCCchhHHHHHHHHhhcc-EEEccCCc
Q 012763          390 HYHLIEATEAARPVLGKYYREPKKSGPIPFNLFGDLIRSMSKD-HYVSDNGD  440 (457)
Q Consensus       390 ~y~Lp~a~~~lkp~l~~~y~e~~~s~~lpy~~~~~l~~s~~~~-~~~~~~g~  440 (457)
                      ++|||+    ++|+++++|+|++    +||+..+ ++++++++ .++++.|+
T Consensus       430 ~~~y~~----i~piVk~~C~k~g----lpY~~~~-~~~a~~~~~~~L~~vg~  472 (485)
T PLN03199        430 RHNIAK----CHALVESFCKEWG----VKYHEAD-LVDGTMEVLHHLGKVAD  472 (485)
T ss_pred             hhhHHh----hhHHHHHHHHHhC----CCccccC-HHHHHHHHHHHHHHHHH
Confidence            999999    7999999999999    9999886 99999988 88888773

>PF11960 DUF3474: Domain of unknown function (DUF3474); InterPro: IPR021863 This presumed domain is functionally uncharacterised

Probab=100.00  E-value=1.4e-37  Score=266.65  Aligned_cols=131  Identities=73%  Similarity=1.202  Sum_probs=105.6

Q ss_pred             CccccccccCCCCCCCCCCCCCCCC----CCCcccccCCccccc-cCCCCCcccCCCCCCCCcceeEeccccccccCCCc
Q 012763            1 MASWVLSECGLKPLPHIFPRPRTGI----NPSKARFLHSKKSIT-DLKLPSVKCSGDFSRDRNWGLKVSAPLRVAPLEGE   75 (457)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (457)
                      ||+||||||||||||++|++||+++    +++++++.++++... ++.    ...+.+.++|+|++|||+|+++.+++||
T Consensus         1 MAswVLSECGlrPLp~iy~~pr~~~~s~~~~~~~r~~~~~~~~~~~~~----~~~~~~~~~r~w~l~VsaP~~~~~~~~e   76 (136)
T PF11960_consen    1 MASWVLSECGLRPLPRIYPRPRTGFISSTNPSKLRFLPSSKSVNLDSS----SPSSSGFRRRNWALNVSAPLRVPSVEEE   76 (136)
T ss_pred             CcceeecccCCCcCccccCCCCCcccccCCCCccccCCcccccccccc----ccccccccccCcceeeeccCcccccccc
Confidence            9999999999999999999999997    356777776654422 222    1234567889999999999999999877


Q ss_pred             hhhhhhccccCcCCCCCCccccCCCCCCCCCCCCCHHHHHHHccccccccCcchhHHHHHHHHHHHHHHHH
Q 012763           76 DEEERINGVNGIGNNKGVEEEEGSEFDPGAPPPFKLADIRAAIPKHCWVKDPWKSMSYVVRDVVVVFGLAA  146 (457)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ir~~ipk~~f~~~~~~s~~~l~~~~~~i~~l~~  146 (457)
                       +++    +.+.      .++++.+|||++||||||+|||++||+|||++|+||+++|+++|+++++++++
T Consensus        77 -~~~----~~~~------~~~~~~~fdp~apPPFtL~dIraAIPkHCf~k~~~rS~sYv~rDv~iv~gLAA  136 (136)
T PF11960_consen   77 -EEE----VSSN------KEEEEEEFDPGAPPPFTLADIRAAIPKHCFVKSPWRSMSYVVRDVAIVFGLAA  136 (136)
T ss_pred             -hhh----cccc------ccccccccCCCCCCCcCHHHHHhhcChhhcCCChHHHHHHHHHHHHHHHHhcC
Confidence             332    1111      13345679999999999999999999999999999999999999999988763

This domain is found in bacteria and eukaryotes. This domain is typically between 126 to 140 amino acids in length. This domain is found associated with PF00487 from PFAM. ; GO: 0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water, 0055114 oxidation-reduction process

>cd03506 Delta6-FADS-like The Delta6 Fatty Acid Desaturase (Delta6-FADS)-like CD includes the integral-membrane enzymes: delta-4, delta-5, delta-6, delta-8, delta-8-sphingolipid, and delta-11 desaturases found in vertebrates, higher plants, fungi, and bacteria

Probab=100.00  E-value=2.3e-34  Score=272.76  Aligned_cols=198  Identities=18%  Similarity=0.204  Sum_probs=145.0

Q ss_pred             HHHHHHHHHHHHHhhhcccccCCCcCCChhHHHHHHHHHhccccChhhHhHhhhccccCCCCCCCCCccccccHHHHhhc
Q 012763          160 YWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTL  239 (457)
Q Consensus       160 ~~~~~G~~~~~l~vl~HD~~Hgs~~~~~~lN~~vG~l~~~~~g~p~~~wr~~H~~HH~~tn~~e~Dpd~~p~~~~~y~~l  239 (457)
                      +++++|+.+.+++.++|||+|+++++++++|+++|.+++.++|.|+..||..|+.||++||+.++|||+.+.+...+.. 
T Consensus         3 ~ai~~g~~~~~~~~~~Hd~~H~~~~~~~~~n~~~g~~~~~~~g~s~~~w~~~H~~HH~~tn~~~~Dpd~~~~~~~~~~~-   81 (204)
T cd03506           3 LAILLGLFWAQGGFLAHDAGHGQVFKNRWLNKLLGLTVGNLLGASAGWWKNKHNVHHAYTNILGHDPDIDTLPLLARSE-   81 (204)
T ss_pred             HHHHHHHHHHHHHHHHHhccCccccCCchHHHHHHHHHHhccCCCHHHHHHHHhhhcCcCCCCCCCCCCCcCceEEecc-
Confidence            4456788888889999999999999999999999999999999999999999999999999999999986533211100 


Q ss_pred             hhhhhhHHhhhhhhHHHHHHHHHHhCCCCCccccCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHh
Q 012763          240 DSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYG  319 (457)
Q Consensus       240 ~~~~r~~~~~~~~~ll~~p~yl~~r~~~~~~~~f~~~~~~f~~~er~~~~~s~l~~~~~~~~l~~l~~~~g~~~~l~~~l  319 (457)
                          +.               .                 ...+..+.......+    ++..   +....     +.+|+
T Consensus        82 ----~~---------------~-----------------~~~~~~~~~~~~q~~----~~~~---~~~~~-----~~~~~  113 (204)
T cd03506          82 ----PA---------------F-----------------GKDQKKRFLHRYQHF----YFFP---LLALL-----LLAFL  113 (204)
T ss_pred             ----cc---------------c-----------------ccchHHHHHHHHHHH----HHHH---HHHHH-----HHHHH
Confidence                00               0                 000000111111110    0000   00001     66899


Q ss_pred             HhHHHHHHHHHHhhhhcccCCCCCCCCC-CCCcccccccceE-eecccc-ccccccccccCcccchhcCCCCCCCCHHHH
Q 012763          320 LPYWIFVMWLDLVTYLHHHGHEDKLPWY-RGKEWSYLRGGLT-TLDRDY-GWFNNIHHDIGTHVIHHLFPQIPHYHLIEA  396 (457)
Q Consensus       320 lP~li~~~~l~~v~~l~H~g~~~~vp~~-~~~ew~~~r~~l~-Tid~~~-g~ln~l~~ninyHveHHLfP~IP~y~Lp~a  396 (457)
                      +|.++.+.++.++++++|... + ++++ +++++++.+.|+. |+|... .|++|+++|+|||+||||||+||+++||+ 
T Consensus       114 ~~~~~~~~~l~~~~~~~H~~~-~-~~~~~~~~~~~w~~~q~~tt~~~~~~~~~~~l~ggln~qieHHLfP~ip~~~l~~-  190 (204)
T cd03506         114 VVQLAGGLWLAVVFQLNHFGM-P-VEDPPGESKNDWLERQVLTTRNITGSPFLDWLHGGLNYQIEHHLFPTMPRHNYPK-  190 (204)
T ss_pred             HHHHHHhhhhheEeecccccc-c-ccCCCCCcccCHHHHHHhCcccCCCCCHHHHHhcchhhHHHHhcCCCchhhhHHH-
Confidence            999999999999999999963 3 5553 4567788888774 666544 57899999999999999999999999999 


Q ss_pred             HHHHhHHHHHhhhcCC
Q 012763          397 TEAARPVLGKYYREPK  412 (457)
Q Consensus       397 ~~~lkp~l~~~y~e~~  412 (457)
                         +.+++++.|+|++
T Consensus       191 ---~~~~v~~~~~~~g  203 (204)
T cd03506         191 ---VAPLVRELCKKHG  203 (204)
T ss_pred             ---HHHHHHHHHHHhC
Confidence               5667777777765

These desaturases are required for the synthesis of highly unsaturated fatty acids (HUFAs), which are mainly esterified into phospholipids and contribute to maintaining membrane fluidity. While HUFAs may be required for cold tolerance in bacteria, plants and fish, the primary role of HUFAs in mammals is cell signaling. These enzymes are described as front-end desaturases because they introduce a double bond between the pre-exiting double bond and the carboxyl (front) end of the fatty acid. Various substrates are involved, with both acyl-coenzyme A (CoA) and acyl-lipid desaturases present in this CD. Acyl-lipid desaturases are localized in the membranes of cyanobacterial thylakoid, plant endoplasmic reticulum (ER), and plastid; an

>cd03514 CrtR_beta-carotene-hydroxylase Beta-carotene hydroxylase (CrtR), the carotenoid zeaxanthin biosynthetic enzyme catalyzes the addition of hydroxyl groups to the beta-ionone rings of beta-carotene to form zeaxanthin and is found in bacteria and red algae

Probab=100.00  E-value=2.7e-33  Score=265.96  Aligned_cols=185  Identities=25%  Similarity=0.357  Sum_probs=138.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhcccccCCCcCCChhHHHHHHHHHhccccChhhHhHhhhccccCCCCCCCCCccccc
Q 012763          152 NNWVVWPLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPL  231 (457)
Q Consensus       152 ~~w~~~~l~~~~~G~~~~~l~vl~HD~~Hgs~~~~~~lN~~vG~l~~~~~g~p~~~wr~~H~~HH~~tn~~e~Dpd~~p~  231 (457)
                      ..|+..++++++.|+.+.++++++|||+|++++++|++|+++|.+++.+++.|+..||..|+.||+++|+.++|||+.  
T Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~Hda~H~~~~~~~~~N~~~g~~~~~~~~~~~~~w~~~H~~HH~~~~~~~~DpD~~--   96 (207)
T cd03514          19 ISYLPLWVCFILNTLSLHLAGTVIHDASHKAASRNRWINELIGHVSAFFLGFPFPVFRRVHMQHHAHTNDPEKDPDHF--   96 (207)
T ss_pred             HccchHHHHHHHHHHHHHHHHHHHHHcccccccCCccHHHHHHHHHHHHHhCCHHHHHHHHHHHhcCcCcCCcCccHH--
Confidence            345555666677888889999999999999999999999999999998999999999999999999999999999963  


Q ss_pred             cHHHHhhchhhhhhHHhhhhhhHHHHHHHHHHhCCCCCccccCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCh
Q 012763          232 SEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGP  311 (457)
Q Consensus       232 ~~~~y~~l~~~~r~~~~~~~~~ll~~p~yl~~r~~~~~~~~f~~~~~~f~~~er~~~~~s~l~~~~~~~~l~~l~~~~g~  311 (457)
                          ..      ..              .                           ..  ..++++   ++....+..+.
T Consensus        97 ----~~------~~--------------~---------------------------~~--~~~~~~---~~~~~~~~~~~  120 (207)
T cd03514          97 ----LL------EW--------------L---------------------------VA--RSLFIT---LLVIAILFGFL  120 (207)
T ss_pred             ----HH------HH--------------H---------------------------HH--HHHHHH---HHHHHHHHHHH
Confidence                00      00              0                           00  001111   11111122345


Q ss_pred             hhHHHHHhHhHHHHHHHHHH-hhhhcccCCCCCCCCCCCCcccccccceEeeccccccccccccccCcccchhcCCCCCC
Q 012763          312 MQLLKLYGLPYWIFVMWLDL-VTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPH  390 (457)
Q Consensus       312 ~~~l~~~llP~li~~~~l~~-v~~l~H~g~~~~vp~~~~~ew~~~r~~l~Tid~~~g~ln~l~~ninyHveHHLfP~IP~  390 (457)
                      +..+++|++|.++.+.++.+ .++++|.+.++      +++|+..+.      ....+++++++|+|||+|||+||+||+
T Consensus       121 ~~~~l~~~iP~l~~~~~l~~~~~~~~H~~~~~------~~~~~~~~~------~~~~l~~~l~~~~nyH~~HHL~P~IP~  188 (207)
T cd03514         121 WELLNLWFLPALIVGTYLALFFDWLPHHPFEE------TQRWDNSRV------YPSKLLNPLIMGQNYHLVHHLWPSIPW  188 (207)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHheeeCccCCCC------ccchhhhhc------ccchhHheeecCCchhHHHhCCCCCch
Confidence            56788999999999999885 66888885432      234433211      111355999999999999999999999


Q ss_pred             CCHHHHHHHHhHHHHH
Q 012763          391 YHLIEATEAARPVLGK  406 (457)
Q Consensus       391 y~Lp~a~~~lkp~l~~  406 (457)
                      ||||++++++|+++++
T Consensus       189 y~Lp~a~~~~~~~~~~  204 (207)
T cd03514         189 YRYPEAYYANKPLLDA  204 (207)
T ss_pred             hhhHHHHHHhHHHHhh
Confidence            9999999999988764

Carotenoids are important natural pigments; zeaxanthin and lutein are the only dietary carotenoids that accumulate in the macular region of the retina and lens. It is proposed that these carotenoids protect ocular tissues against photooxidative damage. CrtR does not show overall amino acid sequence similarity to the beta-carotene hydroxylases similar to CrtZ, an astaxanthin biosynthetic beta-carotene hydroxylase. However, CrtR does show sequence similarity to the green alga, Haematococcus pluvialis, beta-carotene ketolase (CrtW), which converts beta-carotene to canthaxanthin. Sequences of the CrtR_beta-carotene-hydroxylase domain family, as well as, the CrtW_beta-carotene-ketolase domain family appear to be structurally related

>cd03508 Delta4-sphingolipid-FADS-like The Delta4-sphingolipid Fatty Acid Desaturase (Delta4-sphingolipid-FADS)-like CD includes the integral-membrane enzymes, dihydroceramide Delta-4 desaturase, involved in the synthesis of sphingosine; and the human membrane fatty acid (lipid) desaturase (MLD), reported to modulate biosynthesis of the epidermal growth factor receptor; and other related proteins

Probab=99.97  E-value=1.3e-30  Score=258.60  Aligned_cols=249  Identities=20%  Similarity=0.248  Sum_probs=152.0

Q ss_pred             ccccccCcchhHHHHHHHHHHHHHHHHHHHHhhhHHHH-HHHHHHHHHHHHHHHhhhcccccCCCcCCChhHHHHHHHHH
Q 012763          120 KHCWVKDPWKSMSYVVRDVVVVFGLAAAAAYLNNWVVW-PLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLH  198 (457)
Q Consensus       120 k~~f~~~~~~s~~~l~~~~~~i~~l~~~a~~~~~w~~~-~l~~~~~G~~~~~l~vl~HD~~Hgs~~~~~~lN~~vG~l~~  198 (457)
                      |++|++|++.....++..++.++++.++  ...+|+.. ++++++.|+++.++++++|||+|+++|+++++|+++|.+++
T Consensus         9 ~~L~~~~~~~~~~~~~~v~~~~~~~~~l--~~~sw~~~ll~a~vi~~~~~~~l~~l~Hd~~H~~~f~~~~~N~~~g~~~~   86 (289)
T cd03508           9 KKLFGPDPLTKWVVLGVVLLQIITAYLL--RDSSWWKILLVAYFFGGTINHSLFLAIHEISHNLAFGKPLWNRLFGIFAN   86 (289)
T ss_pred             HHhcCCCcchHHHHHHHHHHHHHHHHHH--hcCcHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhcCChHHHHHHHHHHH
Confidence            4788999988777766666555443322  23345544 44555667777899999999999999999999999999988


Q ss_pred             hccccChh-hHhHhhhccccCCCCCCCCCccccccH-HHHhhchhhhhhHHhhhhhhHHHHHHHHHHhCCCCCccccCCC
Q 012763          199 SSILVPYH-GWRISHRTHHQNHGHVENDESWHPLSE-KIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPN  276 (457)
Q Consensus       199 ~~~g~p~~-~wr~~H~~HH~~tn~~e~Dpd~~p~~~-~~y~~l~~~~r~~~~~~~~~ll~~p~yl~~r~~~~~~~~f~~~  276 (457)
                      .++|.|+. .||..|+.||+++|+.+.|||+.+..+ +.++..  ..+      .+....++++...|....   .    
T Consensus        87 ~~~g~p~~~~~r~~H~~HH~~~n~~~~DpDi~~~~~~~l~~~~--~g~------~~~~~~~~~~~~~rp~~~---~----  151 (289)
T cd03508          87 LPIGVPYSISFKKYHLEHHRYLGEDGLDTDIPTEFEGKLFSTV--LGK------AIWVTLQPFFYALRPLFV---R----  151 (289)
T ss_pred             HHhcCChhhHHHHHHHHhccCCCCCCCCCCcchHHHHHHHhCc--hHH------HHHHHHHHHHHHhccccc---C----
Confidence            99999998 599999999999999899999875221 222211  111      011112333333332111   0    


Q ss_pred             CCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHhHhHHHHHHHHHHhhhhcccCCCCCCCCCCCCcccccc
Q 012763          277 SDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLR  356 (457)
Q Consensus       277 ~~~f~~~er~~~~~s~l~~~~~~~~l~~l~~~~g~~~~l~~~llP~li~~~~l~~v~~l~H~g~~~~vp~~~~~ew~~~r  356 (457)
                         .++..+.. +.+.+..+++.   +++.+.+|++.++  |+++.+..+..+       |-    ..++...|+|+...
T Consensus       152 ---~~~~~~~~-~~n~~~~~~~~---~~l~~~~G~~~~l--yll~~~~~~~~~-------~p----~~g~~i~Eh~~~~~  211 (289)
T cd03508         152 ---PKPPTRLE-VINIVVQITFD---YLIYYFFGWKSLA--YLLLGSFLGGGL-------HP----LAGHFISEHYVFTG  211 (289)
T ss_pred             ---CCcchhHH-HHHHHHHHHHH---HHHHHHhCcHHHH--HHHHHHHHHHhh-------cc----cccccccccccccc
Confidence               01112222 23333222222   2234566776543  444444333210       11    12222234444332


Q ss_pred             cceEeeccccccccccccccCcccchhcCCCCCCCCHHHHHHHHhHHHHHhhhc
Q 012763          357 GGLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYRE  410 (457)
Q Consensus       357 ~~l~Tid~~~g~ln~l~~ninyHveHHLfP~IP~y~Lp~a~~~lkp~l~~~y~e  410 (457)
                      ....|.+ .|+|+|++++|+|||.|||+||+||+|+||++++.    .+++|.+
T Consensus       212 ~~~~t~S-~y~~~~~~~~n~~yH~~HH~~p~iP~~~Lp~~~~~----~~~~~~~  260 (289)
T cd03508         212 KGQETYS-YYGPLNLLTFNVGYHNEHHDFPYIPGTRLPKLRKI----APEFYDN  260 (289)
T ss_pred             cCcCCcc-chHHHHHHhhccChHHHhcCCCCCCcccHHHHHHH----CHHHHhC
Confidence            2122322 23889999999999999999999999999998776    4555655

These proteins are found in various eukaryotes including vertebrates, higher plants, and fungi. Studies show that MLD is localized to the endoplasmic reticulum. As with other members of this superfamily, this domain family has extensive hydrophobic regions that would be capable of spanning the membrane bilayer at least twice. Comparison of sequences also reveals the existence of three regions of conserved histidine cluster motifs that contain eight histidine residues: HXXXH, HXXHH, and HXXHH. These histidine residues are reported to be catalytically essential and proposed to be the ligands for

>cd03509 DesA_FADS-like Fatty acid desaturase protein family subgroup, a delta-12 acyl-lipid desaturase-like, DesA-like, yet uncharacterized subgroup of membrane fatty acid desaturase proteins found in alpha-, beta-, and gamma-proteobacteria

Probab=99.97  E-value=5.9e-30  Score=254.17  Aligned_cols=221  Identities=21%  Similarity=0.240  Sum_probs=134.4

Q ss_pred             HHHHHHHHHHHHHhhhcccccCCCcCCChhHHHHHHHHHhccccChhhHhHhhhccccCCC--CCCCCCccccccHHHHh
Q 012763          160 YWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHG--HVENDESWHPLSEKIYR  237 (457)
Q Consensus       160 ~~~~~G~~~~~l~vl~HD~~Hgs~~~~~~lN~~vG~l~~~~~g~p~~~wr~~H~~HH~~tn--~~e~Dpd~~p~~~~~y~  237 (457)
                      +.+++|......++++|||+|+++||+|++|+++|.++ ..++.|+..||.+|+.||+++|  ++++|||....+.++++
T Consensus        30 ~~~~~~~~~~~~~~l~Hd~~Hg~~~~~~~~N~~~g~~~-~~l~~p~~~wr~~H~~HH~~~nl~~~~~Dpd~~~~~~~~~~  108 (288)
T cd03509          30 ATLLLIPLAALHSSLQHELLHGHPTRSRWVNEALGYPP-LALWYPYTRYRDTHLAHHRDEDLTDPGDDPESNYLSPEQWA  108 (288)
T ss_pred             HHHHHHHHHHHHHHHHHHhhccCcccChHHHHHHHHHH-HHHhcCHHHHHHHHHHHcCCCCCCCCCCCCccceecHHHHh
Confidence            44556777777789999999999999999999999885 4556899999999999999999  44689998877777888


Q ss_pred             hchhhhhhHH-h-hhhhhH-HHHHHHH---HHhCCCCCccccCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCh
Q 012763          238 TLDSATRFLR-F-KIPFPL-LAYPFYL---WSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGP  311 (457)
Q Consensus       238 ~l~~~~r~~~-~-~~~~~l-l~~p~yl---~~r~~~~~~~~f~~~~~~f~~~er~~~~~s~l~~~~~~~~l~~l~~~~g~  311 (457)
                      ++..+++... . ..+... +..|.+.   ..+...          ..+.++++.....-....+..+++++.+....|+
T Consensus       109 ~~~~~~r~~~~~~~~~~~~~l~gp~l~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  178 (288)
T cd03509         109 RLPRWQRALLRANNTLLGRLILGPPLGLIAFARDEF----------RALRAGDRAALRAWLLHAALLAPLLAWLQLSAGI  178 (288)
T ss_pred             hCcHHHHHHHHHhhcchhHHhhhhHHHHHHHHHHHH----------HHhccccHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence            7766554431 1 111111 1113221   111110          0112223222211110001111111122222232


Q ss_pred             hhHHHHHhHhHHHHHH-HHHHhhhhcccCCCCCCCCCCCCcccccccceEeeccccccccccccccCcccchhcCCCCCC
Q 012763          312 MQLLKLYGLPYWIFVM-WLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPH  390 (457)
Q Consensus       312 ~~~l~~~llP~li~~~-~l~~v~~l~H~g~~~~vp~~~~~ew~~~r~~l~Tid~~~g~ln~l~~ninyHveHHLfP~IP~  390 (457)
                       . .++|++|.+..+. ...+.++.||.+.++  +  +        ....+++.+ ++++++++|+|||+|||++|+||+
T Consensus       179 -~-~~~~~l~~~~la~~~~~~~~~~Eh~~~~~--~--~--------~rs~~~~~~-~~~~~l~~ninyH~~HH~~P~vP~  243 (288)
T cd03509         179 -P-WWAYLLAVYYPALSLAKIRTFLEHRAHER--P--R--------GRTVINEAG-GPLRLLFLNNNLHVVHHDLPTLPW  243 (288)
T ss_pred             -H-HHHHHHHHHHHHHHHHhhchHhhccCCCC--c--c--------CCceeeeCc-HHHHHHHhcCCchHhhcCCCCCCc
Confidence             2 2233455544443 345667888885321  1  1        111122322 467999999999999999999999


Q ss_pred             CCHHHHHHHHhHHHHH
Q 012763          391 YHLIEATEAARPVLGK  406 (457)
Q Consensus       391 y~Lp~a~~~lkp~l~~  406 (457)
                      |+||++|+++++.+.+
T Consensus       244 y~Lp~~h~~~~~~~~~  259 (288)
T cd03509         244 YDLPRLYRARRDAYLR  259 (288)
T ss_pred             ccHHHHHHHhHHHHhh
Confidence            9999999998888554

Sequences of this domain family appear to be structurally related to membrane fatty acid desaturases and alkane hydroxylases. They all share in common extensive hydrophobic regions that would be capable of spanning the membrane bilayer at least twice. Comparison of these sequences also reveals three regions of conserved histidine cluster motifs that contain eight histidine residues: HXXXH, HXXHH, and HXXHH. These histidine residues are reported to be catalytically essential and proposed to be the ligands for the iron atoms contained within homologs, stearoyl CoA desaturase and alkane hydroxylase.

>PF00487 FA_desaturase: Fatty acid desaturase This entry is only a subset of the Pfam family

Probab=99.97  E-value=1e-30  Score=250.21  Aligned_cols=243  Identities=28%  Similarity=0.439  Sum_probs=147.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcccccCCCcCCChhHHHHHHHHHhccccChhhHhHhhhccccCCCCCCCCCccccccH
Q 012763          154 WVVWPLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSE  233 (457)
Q Consensus       154 w~~~~l~~~~~G~~~~~l~vl~HD~~Hgs~~~~~~lN~~vG~l~~~~~g~p~~~wr~~H~~HH~~tn~~e~Dpd~~p~~~  233 (457)
                      |+.+++++++.|..+.+++.++|||+|+++++++++|+++|.+++.+++.|+..||..|+.||+++|++++|||..+...
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~H~~~H~~~~~~~~~n~~l~~~~~~~~~~~~~~wr~~H~~HH~~~~~~~~Dpd~~~~~~   82 (257)
T PF00487_consen    3 WWWWLLALLLLGLSFARLFGLAHDAGHGAFFRSRWLNDLLGRLLGLPIGGPYSSWRISHNRHHHYTNNPDRDPDSWTRRL   82 (257)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccChHHHHHHHHHHHHhcCCHhHhheeeeccccccCCccccCccchhhh
Confidence            44455666677888889999999999999999999999999999999999999999999999999999888999764311


Q ss_pred             HHHhhchhhhhhHHhhhhhh--HHHHHHHHHHhCCCCCccccCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCh
Q 012763          234 KIYRTLDSATRFLRFKIPFP--LLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGP  311 (457)
Q Consensus       234 ~~y~~l~~~~r~~~~~~~~~--ll~~p~yl~~r~~~~~~~~f~~~~~~f~~~er~~~~~s~l~~~~~~~~l~~l~~~~g~  311 (457)
                      ..++.........++...+.  .+....+.........       ........+.......+.. +.++++++.....++
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  154 (257)
T PF00487_consen   83 PPHQPWRPLFSYRRFLFRFLLSLFFPIWYFIFFFRKRR-------MRRRRKRPRRYLILAALLL-ALLLALLAALFFFSP  154 (257)
T ss_pred             hhhhhhhhhhhhhhccccccccccccchhhhhhccccc-------cccccccchhHHHHHHHhh-hhhhhhhhhhccccc
Confidence            11111111111111111110  0000001100000000       0000001011112222222 222222222344555


Q ss_pred             hhHHHHHhHhHHHHHHHHHHhhhhcccCCCCCCCCCCCCcccccccceE-eecc-ccccccccccccCcccchhcCCCCC
Q 012763          312 MQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLT-TLDR-DYGWFNNIHHDIGTHVIHHLFPQIP  389 (457)
Q Consensus       312 ~~~l~~~llP~li~~~~l~~v~~l~H~g~~~~vp~~~~~ew~~~r~~l~-Tid~-~~g~ln~l~~ninyHveHHLfP~IP  389 (457)
                      +..+++|++|.++...++..+++++|.+.+. .+  ..+..++...++. +.+. ...+++++++|+|||+|||+||+||
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~HHl~P~vp  231 (257)
T PF00487_consen  155 WWALLLFLLPFLIGSFFLAFVTYLEHYGLDP-DD--NEDTRDFYYRQLPGSSNVHNSWWLNWLTGGLNYHIEHHLFPGVP  231 (257)
T ss_pred             ccchhHHHHHHhHHHHHHHHhhHHhhhcccc-cc--cccccceecccccccccccCchhhhccccCCCChHHhCCCCCcC
Confidence            6778889999999888888999999997532 11  1122233333432 2222 2257799999999999999999999


Q ss_pred             CCCHHHHHHHHhHHHHHh
Q 012763          390 HYHLIEATEAARPVLGKY  407 (457)
Q Consensus       390 ~y~Lp~a~~~lkp~l~~~  407 (457)
                      +++||++++.+++.++++
T Consensus       232 ~~~l~~~~~~~~~~~~~~  249 (257)
T PF00487_consen  232 WYNLPEAHPILKEVCPEY  249 (257)
T ss_pred             HHHHHHHHHHHHHHHHHc
Confidence            999999766655555443

; InterPro: IPR005804 Fatty acid desaturases are enzymes that catalyse the insertion of a double bond at the delta position of fatty acids. There seem to be two distinct families of fatty acid desaturases which do not seem to be evolutionary related. Family 1 is composed of: Stearoyl-CoA desaturase (SCD) (1.14.19.1 from EC) []. Family 2 is composed of: Bacterial fatty acid desaturases. Plant stearoyl-acyl-carrier-protein desaturase (1.14.19.1 from EC) [], this enzyme catalyzes the introduction of a double bond at the delta(9) position of steraoyl-ACP to produce oleoyl-ACP. This enzyme is responsible for the conversion of saturated fatty acids to unsaturated fatty acids in the synthesis of vegetable oils. Cyanobacterial DesA [], an enzyme that can introduce a second cis double bond at the delta(12) position of fatty acid bound to membranes glycerolipids. DesA is involved in chilling tolerance; the phase transition temperature of lipids of cellular membranes being dependent on the degree of unsaturation of fatty acids of the membrane lipids. This entry contains fatty acid desaturases belonging to Family 1. ; GO: 0006629 lipid metabolic process

>cd03510 Rhizobitoxine-FADS-like This CD includes the dihydrorhizobitoxine fatty acid desaturase (RtxC) characterized in Bradyrhizobium japonicum USDA110, and other related proteins

Probab=99.97  E-value=8.1e-31  Score=242.63  Aligned_cols=169  Identities=28%  Similarity=0.437  Sum_probs=131.7

Q ss_pred             HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhcccccCCCcCCChhHHHHHHHH-HhccccChhhHhHhhhcc
Q 012763          137 DVVVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLL-HSSILVPYHGWRISHRTH  215 (457)
Q Consensus       137 ~~~~i~~l~~~a~~~~~w~~~~l~~~~~G~~~~~l~vl~HD~~Hgs~~~~~~lN~~vG~l~-~~~~g~p~~~wr~~H~~H  215 (457)
                      ||++|+++++++.+.++|++++++++++|.++.++++++|||+|++++|++++|+++|.++ +.+++.|+..||..|+.|
T Consensus         1 ~w~~i~~~~~~~~~~~~~~~~~l~~~~~g~~~~~l~~l~Hea~H~~l~~~~~~N~~~g~~~~~~p~~~~~~~~r~~H~~H   80 (175)
T cd03510           1 DWLVIAAAVALALAWPNWLAYLLAVLLIGARQRALAILMHDAAHGLLFRNRRLNDFLGNWLAAVPIFQSLAAYRRSHLKH   80 (175)
T ss_pred             ChHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHhhhhCCHHHHHHHHHHH
Confidence            3566777777777788898888888899999999999999999999999999999999765 578999999999999999


Q ss_pred             ccCCCCCCCCCccccccHHHHhhchhhhhhHHhhhhhhHHHHHHHHHHhCCCCCccccCCCCCCCCchhhHHHHHHHHHH
Q 012763          216 HQNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCW  295 (457)
Q Consensus       216 H~~tn~~e~Dpd~~p~~~~~y~~l~~~~r~~~~~~~~~ll~~p~yl~~r~~~~~~~~f~~~~~~f~~~er~~~~~s~l~~  295 (457)
                      |+++|+ ++|||..                                                                  
T Consensus        81 H~~~~~-~~Dpd~~------------------------------------------------------------------   93 (175)
T cd03510          81 HRHLGT-EDDPDLA------------------------------------------------------------------   93 (175)
T ss_pred             hCccCC-CCCCcHH------------------------------------------------------------------
Confidence            999999 8999841                                                                  


Q ss_pred             HHHHHHHHHHHHHhChhhHHHHHhHhHHHHHHHH-HHhhhhcccCCCCCCCCCCCCcccccccceEeecccccccc-ccc
Q 012763          296 TAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWL-DLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWFN-NIH  373 (457)
Q Consensus       296 ~~~~~~l~~l~~~~g~~~~l~~~llP~li~~~~l-~~v~~l~H~g~~~~vp~~~~~ew~~~r~~l~Tid~~~g~ln-~l~  373 (457)
                                       .++++|++|+++....+ .+.+..+|.+.++.     ++..   ..+.+|+.  .+|++ +|.
T Consensus        94 -----------------~~~~~W~~P~~~~~~~~~~~~~~~eH~~~~~~-----~~~~---~~~tr~~~--~~~~~r~l~  146 (175)
T cd03510          94 -----------------LYLLLWLVPLLTVFPLIGRIREIAEHAGVPAD-----EDPD---ARNTRTTF--GGWIERLLF  146 (175)
T ss_pred             -----------------HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCC-----Ccch---hhcCcccc--ccHHHHHHH
Confidence                             23456777777766544 45567799875431     1110   01223332  25664 554


Q ss_pred             --cccCcccchhcCCCCCCCCHHHHHHH
Q 012763          374 --HDIGTHVIHHLFPQIPHYHLIEATEA  399 (457)
Q Consensus       374 --~ninyHveHHLfP~IP~y~Lp~a~~~  399 (457)
                        .|+|||.|||+||+||+|+||++|+.
T Consensus       147 ~p~~~~YH~eHHl~P~vP~~~Lp~~h~~  174 (175)
T cd03510         147 APHNINYHLEHHLFPAVPFYNLPKAHRI  174 (175)
T ss_pred             cccCCcHHHHHhCCcCCchhhHHHHHHh
Confidence              59999999999999999999999875

Dihydrorhizobitoxine desaturase is reported to be involved in the final step of rhizobitoxine biosynthesis. This domain family appears to be structurally related to the membrane fatty acid desaturases and the alkane hydroxylases. They all share in common extensive hydrophobic regions that would be capable of spanning the membrane bilayer at least twice. Comparison of sequences also reveals the existence of three regions of conserved histidine cluster motifs that contain eight histidine residues: HXXXH, HXX(X)HH, and HXXHH. These histidine residues are reported to be catalytically essential and proposed to be the ligands for the iron atoms contained within homologs, stearoyl CoA desaturase and alkane hydroxylase.

>PLN02579 sphingolipid delta-4 desaturase

Probab=99.97  E-value=2.5e-29  Score=252.42  Aligned_cols=266  Identities=20%  Similarity=0.229  Sum_probs=152.3

Q ss_pred             CCCCCCCCCC-HHHHHHHcc--ccccccCcchhHHHHHHHHHHHHHHHHHHHH--hhhHHHHHH-HHHHHHHHHHHHHhh
Q 012763          101 FDPGAPPPFK-LADIRAAIP--KHCWVKDPWKSMSYVVRDVVVVFGLAAAAAY--LNNWVVWPL-YWAAQGTMFWALFVL  174 (457)
Q Consensus       101 ~~~~~~~~~~-l~~ir~~ip--k~~f~~~~~~s~~~l~~~~~~i~~l~~~a~~--~~~w~~~~l-~~~~~G~~~~~l~vl  174 (457)
                      +...++|.-+ .++|.++.|  ++++..|+.....-++..    ++..+++++  ..+|+.+++ ++++.|+...+++++
T Consensus        16 w~~~~~~h~~rr~~il~~ype~~~l~~~d~~~~~k~~~~v----~~~~~~~~l~~~~~w~~~l~~a~~~~g~~~~~lf~~   91 (323)
T PLN02579         16 WSYTDEPHASRRREILSKYPQIKELFGPDPWAFPKIAAVV----LLQLCTATLLHDAGWPKILLVAYFFGGFLNHNLFLA   91 (323)
T ss_pred             ECCchhhHHHHHHHHHHhchHhhcccCCCchHHHHHHHHH----HHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            3344444323 346666667  367766665433222111    111122222  245665555 455677777888999


Q ss_pred             hcccccCCCcCCChhHHHHHHHHHhccccChh-hHhHhhhccccCCCCCCCCCccccccHHHHhhchhhhhhHHhhhhhh
Q 012763          175 GHDCGHGSFSNDHKLNSVVGHLLHSSILVPYH-GWRISHRTHHQNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFP  253 (457)
Q Consensus       175 ~HD~~Hgs~~~~~~lN~~vG~l~~~~~g~p~~-~wr~~H~~HH~~tn~~e~Dpd~~p~~~~~y~~l~~~~r~~~~~~~~~  253 (457)
                      +|||+|+++|+++++|+++|.++++++|.|+. +||..|+.||+++|..+.|||+...  .+++-.   +..+.  ..+.
T Consensus        92 ~HD~~Hg~~f~~~~~N~~lg~~~~l~~g~~~~~~~~~~H~~HH~~~n~~~~D~Di~t~--~E~~l~---~~~~~--~~~~  164 (323)
T PLN02579         92 IHELSHNLAFKTPVYNRWLGIFANLPIGIPMSVTFQKYHLEHHRFQGVDGIDMDIPSQ--GEARLV---RNTLS--KIVW  164 (323)
T ss_pred             HHHhhHhhhcCCHHHHHHHHHHHHHhhcCCHhHHHHHHHHHHccCCCCCCCCCCCCch--hhHHHH---HHHHH--HHHH
Confidence            99999999999999999999999889999997 7999999999999998999997532  222211   11110  0011


Q ss_pred             HHHHHHHHHHhCCCCCccccCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHhHhHHHHHHHHHHhh
Q 012763          254 LLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVT  333 (457)
Q Consensus       254 ll~~p~yl~~r~~~~~~~~f~~~~~~f~~~er~~~~~s~l~~~~~~~~l~~l~~~~g~~~~l~~~llP~li~~~~l~~v~  333 (457)
                      .+..++++..| +..    +.+     .+..+.. +++.++.+   ++.+++.+..|+..++ +.+++. .++..+.   
T Consensus       165 ~~~~~~f~~~r-p~~----~~~-----~~~~~~~-~in~~~~~---~~~~~l~~~~G~~~ll-yl~~~~-~~~~~lh---  225 (323)
T PLN02579        165 VFLQLFFYALR-PLF----VNP-----KPPGLWE-FINLLTQI---AFDAALVYFAGWKSLA-YLILST-FLGGGLH---  225 (323)
T ss_pred             HHHHHHHHHhh-HHh----hcc-----CCchHHH-HHHHHHHH---HHHHHHHHHHCHHHHH-HHHHHH-HHhcccc---
Confidence            12234433333 110    110     1112222 23333322   2223345556776644 222222 2221111   


Q ss_pred             hhcccCCCCCCCCCCCCcccccccceEeeccccccccccccccCcccchhcCCCCCCCCHHHHHHHHhHHHHHhhhc
Q 012763          334 YLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYRE  410 (457)
Q Consensus       334 ~l~H~g~~~~vp~~~~~ew~~~r~~l~Tid~~~g~ln~l~~ninyHveHHLfP~IP~y~Lp~a~~~lkp~l~~~y~e  410 (457)
                              +..++..++.|...+.+- |.. -||++|++++|+|||.|||+||.||+|+||+    ++++.+++|+.
T Consensus       226 --------p~~g~~~~ehy~~~~~~e-tys-yyg~ln~l~~NigYH~eHH~fP~IP~~~Lp~----l~~~~pe~y~~  288 (323)
T PLN02579        226 --------PMAGHFISEHYVFNPGQE-TYS-YYGPLNLLTWNVGYHNEHHDFPRIPGSKLHK----VKEIAPEYYDN  288 (323)
T ss_pred             --------cccceeeccceeccCCCC-cee-ehhHHHHHhhcccccHhhcCCCCCchhhHHH----HHHhCHHHHhC
Confidence                    111211122222222221 321 2489999999999999999999999999999    56678888875

>cd03513 CrtW_beta-carotene-ketolase Beta-carotene ketolase/oxygenase (CrtW, also known as CrtO), the carotenoid astaxanthin biosynthetic enzyme, initially catalyzes the addition of two keto groups to carbons C4 and C4' of beta-carotene

Probab=99.96  E-value=8.1e-29  Score=237.10  Aligned_cols=189  Identities=22%  Similarity=0.311  Sum_probs=129.2

Q ss_pred             HHHHHHHHHHHHHHHHhhhcccccCCCc-CCChhHHHHHHHHH-hccccChhhHhHhhhccccCCCCCCCCCccccccHH
Q 012763          157 WPLYWAAQGTMFWALFVLGHDCGHGSFS-NDHKLNSVVGHLLH-SSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEK  234 (457)
Q Consensus       157 ~~l~~~~~G~~~~~l~vl~HD~~Hgs~~-~~~~lN~~vG~l~~-~~~g~p~~~wr~~H~~HH~~tn~~e~Dpd~~p~~~~  234 (457)
                      .++.++++|+.+.++++++|||+|++++ +++++|+++|.+++ ++.+.|+..||..|+.||+++|++ +|||+.+.++.
T Consensus        32 ~~~~~~~~g~l~~glfi~~HDa~Hg~~~~~~~~~N~~iG~~~~~l~~g~~~~~~~~~H~~HH~~~~~~-~DpD~~~~~~~  110 (225)
T cd03513          32 IAAVVLLQTFLHTGLFIIAHDAMHGSLAPGNPRLNRAIGRLCLFLYAGFSYDRLLRKHHLHHRHPGTA-KDPDFHKGNPS  110 (225)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhccccCCchHHHHHHHHHHHHhhcCCHHHHHHHHHHHcCCCCCC-CCCCCCCCCCC
Confidence            3345566899999999999999999999 79999999999985 678999999999999999999996 99998764320


Q ss_pred             HHhhchhhhhhHHhhhhhhHHHHHHHHHHhCCCCCccccCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhChhhH
Q 012763          235 IYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQL  314 (457)
Q Consensus       235 ~y~~l~~~~r~~~~~~~~~ll~~p~yl~~r~~~~~~~~f~~~~~~f~~~er~~~~~s~l~~~~~~~~l~~l~~~~g~~~~  314 (457)
                               +..+++..          +.+.       +      +   ...+++.-.+++    .++ ......+...+
T Consensus       111 ---------~~~~wy~~----------f~~~-------y------~---~~~qli~l~ivw----~~~-l~~~~~~~~~~  150 (225)
T cd03513         111 ---------GFLPWYLH----------FMSN-------Y------F---GWRQLAILAAVW----LLL-LGLGSAPLANL  150 (225)
T ss_pred             ---------ChHHHHHH----------HHHh-------H------h---HHHHHHHHHHHH----HHH-HHHHcccHHHH
Confidence                     00111000          0000       0      0   011111111111    111 11112356678


Q ss_pred             HHHHhHhHHHHHHHHHHh-hhhcccCCCCCCCCCCCCcccccccceEeecccccccccc-ccccCcccchhcCCCCCCCC
Q 012763          315 LKLYGLPYWIFVMWLDLV-TYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWFNNI-HHDIGTHVIHHLFPQIPHYH  392 (457)
Q Consensus       315 l~~~llP~li~~~~l~~v-~~l~H~g~~~~vp~~~~~ew~~~r~~l~Tid~~~g~ln~l-~~ninyHveHHLfP~IP~y~  392 (457)
                      +++|++|.++.++++.++ |++.|..  .+.|..+.      + +.+|++. .+|++++ +.++|||.|||+||+||||+
T Consensus       151 ~~~~~~P~l~~~~~l~~f~T~lpH~~--~~~~~~~~------~-~a~~~~~-~~~~~~l~c~~fgyH~eHH~fP~~Pw~~  220 (225)
T cd03513         151 LLFWALPLILSSLQLFYFGTWLPHRP--GRGGFADR------H-RARSSRL-SPVLSFLTCYHFGYHHEHHLSPSTPWWR  220 (225)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCC--CCCCCCCc------c-cceecCc-cHHHHHHHHHhcCcchhhccCCCCCccc
Confidence            999999999999999887 8999973  33343221      1 1224321 2678886 48899999999999999999


Q ss_pred             HHHH
Q 012763          393 LIEA  396 (457)
Q Consensus       393 Lp~a  396 (457)
                      ||++
T Consensus       221 Lp~~  224 (225)
T cd03513         221 LPEL  224 (225)
T ss_pred             Cccc
Confidence            9985

Carotenoids are important natural pigments produced by many microorganisms and plants. Astaxanthin is reported to be an antioxidant, an anti-cancer agent, and an immune system stimulant. A number of bacteria and green algae can convert beta-carotene into astaxanthin by using several ketocarotenoids as intermediates and CrtW and a beta-carotene hydroxylase (CrtZ). CrtW initially converts beta-carotene to canthaxanthin via echinenone, and CrtZ initially mediates the conversion of beta-carotene to zeaxanthin via beta-cryptoxanthin. After a few more intermediates are formed, CrtW and CrtZ act in combination to produce astaxanthin. Sequences of this domain family appear to be structurally related to membrane fatty acid desaturases and alkane hydroxylases. Th

>KOG4232 consensus Delta 6-fatty acid desaturase/delta-8 sphingolipid desaturase [Lipid transport and metabolism]

Probab=99.94  E-value=8.6e-27  Score=234.43  Aligned_cols=302  Identities=15%  Similarity=0.160  Sum_probs=169.2

Q ss_pred             HHHHHHHccc-cccccCcchhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhcccccCCCcCCChh
Q 012763          111 LADIRAAIPK-HCWVKDPWKSMSYVVRDVVVVFGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGHDCGHGSFSNDHKL  189 (457)
Q Consensus       111 l~~ir~~ipk-~~f~~~~~~s~~~l~~~~~~i~~l~~~a~~~~~w~~~~l~~~~~G~~~~~l~vl~HD~~Hgs~~~~~~l  189 (457)
                      -+++|+.+++ ++++.++...+...+.+++..++.+.+.+     ...++.+++.|+.+++.++++||.||.+.+|++++
T Consensus       101 f~klr~~~~~~gl~~~~~~ffl~~~l~~i~~~~~a~~~i~-----~~~l~~a~Ll~~a~~Qs~~l~Hd~gH~~i~~~~~w  175 (430)
T KOG4232|consen  101 FRKLREKLEDMGLMDLNKTFFLHLLLLIILYLVLAWLLIY-----LLSLISAVLLGLAWAQSGWLQHDYGHLSIFKNSKW  175 (430)
T ss_pred             HHHHHHHHhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhcccccccccccccH
Confidence            4577777774 66666665555444444433322222221     11456777889999999999999999999999999


Q ss_pred             HHHHHHHHH-hccccChhhHhHhhhccccCCCCCCCCCccccccH---HHHhh--chhhhhhHH-hh---hhhhHHHHHH
Q 012763          190 NSVVGHLLH-SSILVPYHGWRISHRTHHQNHGHVENDESWHPLSE---KIYRT--LDSATRFLR-FK---IPFPLLAYPF  259 (457)
Q Consensus       190 N~~vG~l~~-~~~g~p~~~wr~~H~~HH~~tn~~e~Dpd~~p~~~---~~y~~--l~~~~r~~~-~~---~~~~ll~~p~  259 (457)
                      |+++..+.+ ...|.|..+|+..|+.||.++|..++|||+...+.   .....  .++.++... +.   ..+...+.|+
T Consensus       176 N~~~~~fv~n~L~G~sa~WW~~~H~~HHa~pN~~~~DpDi~~~P~fl~g~~~~~~~~k~krk~~~~~~qh~yf~~~~~p~  255 (430)
T KOG4232|consen  176 NHLAQKFVGNHLKGFSAAWWKSHHNQHHAAPNSLDKDPDIDFEPAFLLGDPNSHEYGKKKRKYTPYPEQHLYFFLIGPPF  255 (430)
T ss_pred             HHHHHHHHhhhcccccHHHHHHHHhhhhccCccCCCCccccccchhhhCCCchhhhcccceeEeecccceEEEEeccchH
Confidence            999999887 47899999999999999999999999999753221   00000  000111100 00   0011111122


Q ss_pred             HHHHhCCCCCccccCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHhHhH----HHHHHHHHHhh-h
Q 012763          260 YLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPY----WIFVMWLDLVT-Y  334 (457)
Q Consensus       260 yl~~r~~~~~~~~f~~~~~~f~~~er~~~~~s~l~~~~~~~~l~~l~~~~g~~~~l~~~llP~----li~~~~l~~v~-~  334 (457)
                      +..+-.. ....-+......+.+.++..-...-++.+...+           +.+..+..+|.    +.++.|...++ .
T Consensus       256 l~~~~~~-~~~~~~~~~~~~w~Dl~~~~~~~~~~~i~~~~~-----------~~~~~~~~L~~w~~r~~~~~~s~~v~l~  323 (430)
T KOG4232|consen  256 LRLMWFQ-QSIIFVQTNLLLWYDLYWPDRFYLRAFIYLHWG-----------WGLLLLSCLPNWPIRFLFSSWSFWVTLT  323 (430)
T ss_pred             HHHHHHH-HHHHHHHhHHHHHHHhhhhhhHHHhhHHHhcch-----------hhhHHHHhccCchHHHHHHHHHHHHHHh
Confidence            1110000 000000000000000011000000000000111           11111222222    22344444444 6


Q ss_pred             hcccCCCCCCCCCCCCcccccccce-Eeecccc-ccccccccccCcccchhcCCCCCCCCHHHHHHHHhHHHHHhhhcCC
Q 012763          335 LHHHGHEDKLPWYRGKEWSYLRGGL-TTLDRDY-GWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYREPK  412 (457)
Q Consensus       335 l~H~g~~~~vp~~~~~ew~~~r~~l-~Tid~~~-g~ln~l~~ninyHveHHLfP~IP~y~Lp~a~~~lkp~l~~~y~e~~  412 (457)
                      ++|+.  .++....+...+|...|+ +|+|+.. .|++||.+++|+|+||||||+||++||++    +.|.+++.|+|++
T Consensus       324 ~nH~~--~~i~~~~~i~~dw~~~Q~~tT~n~~~~~f~dwl~ghln~qieHHLFPtmpr~nL~~----v~P~Vke~c~k~~  397 (430)
T KOG4232|consen  324 MNHID--PEIYHEGDIRRDWFSLQLATTINVGPSKFSDWLSGHLNFQIEHHLFPTMPRHNLNK----VAPLVKELCKKHG  397 (430)
T ss_pred             hhccc--hhhccCCcchhhHHHHHHhhccccCchhHHHHHHhhhhhhHHhhcCCCCCccchHH----HHHHHHHHHHHcC
Confidence            78883  223222221133444455 3676543 58899999999999999999999999999    7999999999999


Q ss_pred             CCCCCchhHHHHHHHHhhcc-EEEccCCc
Q 012763          413 KSGPIPFNLFGDLIRSMSKD-HYVSDNGD  440 (457)
Q Consensus       413 ~s~~lpy~~~~~l~~s~~~~-~~~~~~g~  440 (457)
                          +||... .+++++... +-++++++
T Consensus       398 ----l~y~~~-~~~~~~~~~~~~lr~~~n  421 (430)
T KOG4232|consen  398 ----LPYREK-PHFEALGDIIQQLRNSAN  421 (430)
T ss_pred             ----Cccccc-hHHHHHHHHHHHhhhccc
Confidence                898544 777776654 44455554

>KOG2987 consensus Fatty acid desaturase [Lipid transport and metabolism]

Probab=99.82  E-value=1.4e-19  Score=170.62  Aligned_cols=266  Identities=21%  Similarity=0.349  Sum_probs=156.2

Q ss_pred             CCCCCCCCCCC-HHHHHHHcc--ccccccCcchhHHHHHHHHHHHHHHHHHHHHhh-hHHHHHHH--HHHHHHHHHHHHh
Q 012763          100 EFDPGAPPPFK-LADIRAAIP--KHCWVKDPWKSMSYVVRDVVVVFGLAAAAAYLN-NWVVWPLY--WAAQGTMFWALFV  173 (457)
Q Consensus       100 ~~~~~~~~~~~-l~~ir~~ip--k~~f~~~~~~s~~~l~~~~~~i~~l~~~a~~~~-~w~~~~l~--~~~~G~~~~~l~v  173 (457)
                      ++...++|..+ .++|.++-|  |.+|..||+.-+.-+...++-+.+++   ..-+ .| .|.+.  -++-|++-..++.
T Consensus        11 ~W~yTeePHasRR~eIL~kyPeIk~Lfg~dp~~kwvv~~~Vi~Q~~~~~---ll~dl~W-~~il~~AYf~gg~iNhsl~L   86 (324)
T KOG2987|consen   11 EWVYTEEPHASRRKEILAKYPEIKSLFGPDPNLKWVVLGMVILQILAAY---LLRDLDW-KWILFIAYFFGGFINHSLTL   86 (324)
T ss_pred             eEEecCCcchhHHHHHHHhChHHHHHhCCCcchHHHHHHHHHHHHHHHH---HHhcccH-HHHHHHHHHhhhhhchhHHH
Confidence            47778888885 669999999  68999999876533332222222111   1222 34 33332  2345666688888


Q ss_pred             hhcccccCCCcCC--ChhHHHHHHHHHhccccChh-hHhHhhhccccCCCCCCCCCccccccHH-HHhhchhhhhhHHhh
Q 012763          174 LGHDCGHGSFSND--HKLNSVVGHLLHSSILVPYH-GWRISHRTHHQNHGHVENDESWHPLSEK-IYRTLDSATRFLRFK  249 (457)
Q Consensus       174 l~HD~~Hgs~~~~--~~lN~~vG~l~~~~~g~p~~-~wr~~H~~HH~~tn~~e~Dpd~~p~~~~-~y~~l~~~~r~~~~~  249 (457)
                      ..||-+|...|.+  +-.|+++|.++.+|+|+|+. +.+..|..||++.+..+-|-|.....+. .+..  ...|.+  .
T Consensus        87 AIHeiSHN~aFg~~rpl~NR~~g~fANLPigvP~siSFkkYHleHHry~G~DgiDtDvPT~~Ea~~f~t--~~~K~i--w  162 (324)
T KOG2987|consen   87 AIHEISHNLAFGTNRPLYNRIFGFFANLPIGVPMSISFKKYHLEHHRYLGVDGIDTDVPTRFEAWLFDT--AFGKLI--W  162 (324)
T ss_pred             HHHHhhhhhhcccCchHHHHHHHHhhcCcccCceeeeehhhhhHHhHhcCCccccCCCCchhheehhhh--hhHHHH--H
Confidence            8999999999987  77999999999999999995 8999999999999998999997543321 1211  122221  1


Q ss_pred             hhhhHHHHHHHHHHhCCCCCccccCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHhHhHHHHHHHH
Q 012763          250 IPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWL  329 (457)
Q Consensus       250 ~~~~ll~~p~yl~~r~~~~~~~~f~~~~~~f~~~er~~~~~s~l~~~~~~~~l~~l~~~~g~~~~l~~~llP~li~~~~l  329 (457)
                      ..++    |++...|-.     -..|.     +-.+.++ ++++..+.+=   +.+...+||..++      +++.+.++
T Consensus       163 ~~lQ----pfFY~fRPl-----~i~pk-----p~t~me~-iN~iiQ~~fd---~li~~f~G~ksl~------Yll~~s~l  218 (324)
T KOG2987|consen  163 VTLQ----PFFYAFRPL-----FIYPK-----PPTDMEF-INTIIQLSFD---LLIVYFFGWKSLA------YLLASSFL  218 (324)
T ss_pred             HHHH----HHHHhhhhh-----eecCC-----CchHHHH-HHHHHHHHHH---HHHHHHHhHHHHH------HHHHHHHH
Confidence            1111    221111210     00111     1112222 2322222221   1223446665432      22222222


Q ss_pred             HHhhhhcccCCCCCCCCCCCCcccccccceEeeccccccccccccccCcccchhcCCCCCCCCHHHHHHHHhHHHHHhhh
Q 012763          330 DLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIEATEAARPVLGKYYR  409 (457)
Q Consensus       330 ~~v~~l~H~g~~~~vp~~~~~ew~~~r~~l~Tid~~~g~ln~l~~ninyHveHHLfP~IP~y~Lp~a~~~lkp~l~~~y~  409 (457)
                      +.-  + |    +..-+.-+|.+.+.+++ +|.. -||.+|+++.|.|||+|||-||.||.++||+    ++++-+|||.
T Consensus       219 g~g--L-H----P~aGHFisEHY~f~k~~-ETyS-YYGplN~~tfNvGYH~EHHDFP~Ipg~~Lp~----Vr~iApEyYd  285 (324)
T KOG2987|consen  219 GMG--L-H----PIAGHFISEHYMFKKGQ-ETYS-YYGPLNLLTFNVGYHVEHHDFPYIPGSRLPK----VREIAPEYYD  285 (324)
T ss_pred             cCC--C-C----cccchhhHhhhhhcCCc-ccee-eecceeeEEEecccccccccCCCCCccccHH----HHHhhHHHhc
Confidence            211  0 1    10011112222333333 2442 2599999999999999999999999999999    6888889997


Q ss_pred             c
Q 012763          410 E  410 (457)
Q Consensus       410 e  410 (457)
                      .
T Consensus       286 ~  286 (324)
T KOG2987|consen  286 N  286 (324)
T ss_pred             C
Confidence            5

>cd03512 Alkane-hydroxylase Alkane hydroxylase is a bacterial, integral-membrane di-iron enzyme that shares a requirement for iron and oxygen for activity similar to that of the non-heme integral-membrane acyl coenzyme A (CoA) desaturases and acyl lipid desaturases

Probab=99.82  E-value=1.5e-20  Score=189.03  Aligned_cols=243  Identities=23%  Similarity=0.261  Sum_probs=141.0

Q ss_pred             hHHHHHHHHHHHHHHHHHH-HhhhcccccCCCcCCChhHHHHHHHHHhccccChhhHhHhhh-ccccCCCCCCCCCcccc
Q 012763          153 NWVVWPLYWAAQGTMFWAL-FVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHR-THHQNHGHVENDESWHP  230 (457)
Q Consensus       153 ~w~~~~l~~~~~G~~~~~l-~vl~HD~~Hgs~~~~~~lN~~vG~l~~~~~g~p~~~wr~~H~-~HH~~tn~~e~Dpd~~p  230 (457)
                      +|+..+.+++..|+...++ ...+||++|    |++++|+++|.++..+.+  +..|+..|+ .||+++++ ++|||...
T Consensus        68 ~~~~~~~~~~~~G~~~g~i~~~~aHel~H----r~~~lnr~lg~~~~~~~~--~~~~~~~H~~~HH~~v~t-p~DP~tar  140 (314)
T cd03512          68 SALEKVGLILSLGLLSGVIGINTAHELIH----RRSRLERWLGKLLLASLL--YGHFAIEHVRGHHRYVAT-PEDPATAR  140 (314)
T ss_pred             cHHHHHHHHHHHHHHHHHhhHHHHHhccC----CCChHHHHHHHHHHHHhc--ccceeeeecccCCCCCCC-CCCccccc
Confidence            4555555556677766545 478888888    679999999999876554  445999998 89999998 79999764


Q ss_pred             ccHHHHhhchhhhhhHHhhhhhhHHHHHHHHHHhCCCCCccccCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 012763          231 LSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMG  310 (457)
Q Consensus       231 ~~~~~y~~l~~~~r~~~~~~~~~ll~~p~yl~~r~~~~~~~~f~~~~~~f~~~er~~~~~s~l~~~~~~~~l~~l~~~~g  310 (457)
                      ..+..|+-+.   |..  ...+ .-+|-.- -.|.. +.+.      +.+  .-+.+++...+    +.++++++++..+
T Consensus       141 ~ge~~y~f~~---r~~--~g~~-~~aw~~e-~~rl~-~~g~------~~~--~~~n~~l~~~~----~~~a~~~~~~~~~  200 (314)
T cd03512         141 RGESFYRFLP---RAL--VGSF-RSAWKLE-KKRLR-RKGR------SPW--SPRNEVLRYLA----LAVALLALAAALG  200 (314)
T ss_pred             cCccHHHHHH---HHH--HHHH-HHHHHHH-HHHHH-hcCC------CCC--ccchHHHHHHH----HHHHHHHHHHHHH
Confidence            4443443110   000  0000 0011000 00100 0010      000  11222222222    2233334444455


Q ss_pred             hhhHHHHHhHhHHHHHHHHHHhhhhcccCCCCCCCCCCCCcccccccceEeeccccccccccccccCcccchhcCCCCCC
Q 012763          311 PMQLLKLYGLPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPH  390 (457)
Q Consensus       311 ~~~~l~~~llP~li~~~~l~~v~~l~H~g~~~~vp~~~~~ew~~~r~~l~Tid~~~g~ln~l~~ninyHveHHLfP~IP~  390 (457)
                      .+..+.++++|.++....+..++|+||.|+..+ ...++ .++..+.+ -+-+.+....|++..|+++|.+||.+|++|+
T Consensus       201 g~~~l~~~l~~~~~g~~~l~~~nY~EHyGL~r~-~~~~g-r~e~~~~~-hSWNs~~~~~n~l~~nl~rHsdHH~~p~~~y  277 (314)
T cd03512         201 GLAGLLFLLIQAFYAKSLLELVNYIEHYGLLRK-KLANG-RYEPVGPR-HSWNSNHIVSNLLLFNLQRHSDHHAHPTRPY  277 (314)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc-cCCCC-ccccCCCc-cCcCcCcHHHHHHHHhcchhhhhccCCCCch
Confidence            566778889999888888899999999997432 11111 11111100 0222222345889999999999999999999


Q ss_pred             CCHHHHHHHHhHHHHHhhhcCCCCCCCchhHHHHHHHHhhcc
Q 012763          391 YHLIEATEAARPVLGKYYREPKKSGPIPFNLFGDLIRSMSKD  432 (457)
Q Consensus       391 y~Lp~a~~~lkp~l~~~y~e~~~s~~lpy~~~~~l~~s~~~~  432 (457)
                      +.|+...++  |.++.-|--.     +-..++|.+|+.+++.
T Consensus       278 ~~L~~~~~~--p~lP~~y~~m-----~~~al~P~lw~~~m~~  312 (314)
T cd03512         278 QALRPFPEA--PQLPSGYPVM-----ALLALIPPLWRRVMDP  312 (314)
T ss_pred             hhccCCccC--CCCCccHHHH-----HHHHHhhHHHHHhhcc
Confidence            999986553  5555444222     1234678888887654

The alk genes in Pseudomonas oleovorans encode conversion of alkanes to acyl CoA. The alkane omega-hydroxylase (AlkB) system is responsible for the initial oxidation of inactivated alkanes. It is a three-component system comprising a soluble NADH-rubredoxin reductase (AlkT), a soluble rubredoxin (AlkG), and the integral membrane oxygenase (AlkB). AlkB utilizes the oxygen rebound mechanism to hydroxylate alkanes. This mechanism involves homolytic cleavage of the C-H bond by an electrophilic metal-oxo intermediate to generate a substrate-based radical. As with other members of this superfamily, this domain family has extensive hydrophobic regions that would be capable of spanning the membrane bilayer at least twice. The active

>cd01060 Membrane-FADS-like The membrane fatty acid desaturase (Membrane_FADS)-like CD includes membrane FADSs, alkane hydroxylases, beta carotene ketolases (CrtW-like), hydroxylases (CrtR-like), and other related proteins

Probab=99.70  E-value=2.1e-17  Score=142.85  Aligned_cols=59  Identities=37%  Similarity=0.535  Sum_probs=55.8

Q ss_pred             HHHhhhcccccCCCcCCChhHHHHHHHHHhccccChhhHhHhhhccccCCCCCCCCCcc
Q 012763          170 ALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESW  228 (457)
Q Consensus       170 ~l~vl~HD~~Hgs~~~~~~lN~~vG~l~~~~~g~p~~~wr~~H~~HH~~tn~~e~Dpd~  228 (457)
                      ++..++|||+|+++++++++|++++.+++.+++.|+..|+..|+.||+++++.++|||.
T Consensus        14 ~~~~~~H~~~H~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~H~~HH~~~~~~~~D~~~   72 (122)
T cd01060          14 GLTVLAHELGHRSFFRSRWLNRLLGALLGLALGGSYGWWRRSHRRHHRYTNTPGKDPDS   72 (122)
T ss_pred             HHHHHHHHHhhhhhhccccHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCcCCCCCCCcc
Confidence            67789999999999999999999999999999999999999999999999997799984

They are present in all groups of organisms with the exception of archaea. Membrane FADSs are non-heme, iron-containing, oxygen-dependent enzymes involved in regioselective introduction of double bonds in fatty acyl aliphatic chains. They play an important role in the maintenance of the proper structure and functioning of biological membranes. Alkane hydroxylases are bacterial, integral-membrane di-iron enzymes that share a requirement for iron and oxygen for activity similar to that of membrane FADSs, and are involved in the initial oxidation of inactivated alkanes. Beta-carotene ketolase and beta-carotene hydroxylase are carotenoid biosynthetic enzymes for astaxanthin and zeaxanthin, respectively. This superfamily domain has extensive hydrophobic regions that would

>COG1398 OLE1 Fatty-acid desaturase [Lipid metabolism]

Probab=98.40  E-value=1.4e-05  Score=77.57  Aligned_cols=51  Identities=24%  Similarity=0.317  Sum_probs=41.6

Q ss_pred             hccc-ccCCCcCCChhHHHHHHHHHhccccChhhHhHhhhccccCCCCCCCCC
Q 012763          175 GHDC-GHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDE  226 (457)
Q Consensus       175 ~HD~-~Hgs~~~~~~lN~~vG~l~~~~~g~p~~~wr~~H~~HH~~tn~~e~Dp  226 (457)
                      -|-| +|+++.-.+++.-++.....+....|...|-..|+.||+++ +.+.||
T Consensus        66 ~HRl~sHRa~~~~k~Le~~la~~g~l~~~G~~~~W~~~HR~HHr~t-DTd~DP  117 (289)
T COG1398          66 LHRLWSHRAFKAHKWLEYVLAFWGALTTQGPAIEWVGIHRKHHRKT-DTDQDP  117 (289)
T ss_pred             hhhhhhhhhcccchHHHHHHHHHHHhhcCCCceeHHHHHHHhhccc-CCCCCC
Confidence            4655 78888888888877777766677788899999999999999 447777

>PLN02220 delta-9 acyl-lipid desaturase

Probab=98.17  E-value=3.3e-05  Score=77.31  Aligned_cols=51  Identities=24%  Similarity=0.210  Sum_probs=38.5

Q ss_pred             hcc-cccCCCcCCChhHHHHHHHHHhccccChhhHhHhhhccccCCCCCCCCC
Q 012763          175 GHD-CGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDE  226 (457)
Q Consensus       175 ~HD-~~Hgs~~~~~~lN~~vG~l~~~~~g~p~~~wr~~H~~HH~~tn~~e~Dp  226 (457)
                      .|= .+|+++--++++..++..+..+....+...|-..|+.||+++.+ ++||
T Consensus        76 yHRl~sHrsfka~~~l~~~la~~g~~a~Qgs~~~Wv~~HR~HH~~sDt-~~DP  127 (299)
T PLN02220         76 YHRNLAHRSFKLPKWLEYPFAYSALFALQGDPIDWVSTHRFHHQFTDS-DRDP  127 (299)
T ss_pred             HHHHHHhhcCcCcHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCC-CCCc
Confidence            343 47888887888876666665555556778999999999999966 6676

>KOG1600 consensus Fatty acid desaturase [Lipid transport and metabolism]

Probab=97.19  E-value=0.0052  Score=61.21  Aligned_cols=49  Identities=18%  Similarity=0.257  Sum_probs=36.9

Q ss_pred             cccCCCcCCChhHHHHHHHHHhccccChhhHhHhhhccccCCCCCCCCCc
Q 012763          178 CGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDES  227 (457)
Q Consensus       178 ~~Hgs~~~~~~lN~~vG~l~~~~~g~p~~~wr~~H~~HH~~tn~~e~Dpd  227 (457)
                      =+|.++.-++++.-++...-.+.+--+...|-..|+.||++|.+ ++||-
T Consensus        91 wsHRSyKa~kpLr~fla~~~~~A~Qg~~~~WvrdHR~HHk~tdT-D~DPh  139 (321)
T KOG1600|consen   91 WSHRSYKAPKPLRYFLAYCNTLAFQGDIIDWVRDHRVHHKFTDT-DADPH  139 (321)
T ss_pred             cccccccCCccHHHHHHHHHHHhccCChhHHHhhhhhhcccccc-CCCCC
Confidence            47888888888877776665544434455899999999999977 78873

>cd03505 Delta9-FADS-like The Delta9 Fatty Acid Desaturase (Delta9-FADS)-like CD includes the delta-9 and delta-11 acyl CoA desaturases found in various eukaryotes including vertebrates, insects, higher plants, and fungi

Probab=97.05  E-value=0.0042  Score=57.73  Aligned_cols=48  Identities=23%  Similarity=0.253  Sum_probs=39.6

Q ss_pred             cccCCCcCCChhHHHHHHHHHhccccChhhHhHhhhccccCCCCCCCCC
Q 012763          178 CGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDE  226 (457)
Q Consensus       178 ~~Hgs~~~~~~lN~~vG~l~~~~~g~p~~~wr~~H~~HH~~tn~~e~Dp  226 (457)
                      ..|+++.-++++..++..+..+....+...|...|+.||+++.+ ++||
T Consensus        27 ~aHrsfk~~~~l~~~l~~~g~~a~qgs~~~W~~~HR~HH~~sDt-~~DP   74 (178)
T cd03505          27 WAHRSFKAPKPLRIFLAILGSLAGQGSPLWWVADHRLHHRYSDT-DGDP   74 (178)
T ss_pred             HhhccCcCcHHHHHHHHHHHHHHcCcCHHHHHHHHHHhhcccCC-CCCC
Confidence            36899988888888777776666677888999999999999976 5676

The delta-9 acyl-lipid desaturases are found in a wide range of bacteria. These enzymes play essential roles in fatty acid metabolism and the regulation of cell membrane fluidity. Acyl-CoA desaturases are the enzymes involved in the CoA-bound desaturation of fatty acids. Mammalian stearoyl-CoA delta-9 desaturase is a key enzyme in the biosynthesis of monounsaturated fatty acids, and in yeast, the delta-9 acyl-CoA desaturase (OLE1) reaction accounts for all de nova unsaturated fatty acid production in Saccharomyces cerevisiae. These non-heme, iron-containing, ER membrane-bound enzymes are part of a three-component enzyme system involving cytochrome b5, cytochrome b5 reductase, and the delta-9 fatty acid desaturase. This complex catalyzes the NADH- and oxygen-dependent i

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00