Citrus Sinensis ID: 012776

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450------

MASDGSKQGGGFFASIAAGWSTFGSAMSKSVNGLLGYEGLEVVNPEGSTEDAEDEARRGRWKQEERDNYWKMMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIYFAYRRAWKPFNPVLGETFEMVNHGGVTFIAEQVSHHPPMSAGHAENEHFIYDVTSKLRTKFLGNSIDVYPVGRTRVTLKRDGVVLDLVPPPTKVHNLIFGRTWIDSPGDMVMTNLTTGDKVVLYFQPCGWFGAGRYEVDGYVYDAAEQPKILMTGKWNESMSYQPCDSEGEPLPGTELKEVWRVADAPEDDKYQYTYFTHKLNSFDTAPKKLLPSDSRLRPDRYALEKGDLSKAGSEKSRLEERQRAEKRIREAKDDMFTPKWFDLSDEVTPTPWGDLEVYRYNGKYSELRATLDNSESLGEINPETTEFNPWQYEDSAAE

cccccccccccccEEEcccccccccccccccccccccccccccccccccccHHHHHHHcccccccccHHHHHHHHccccccccccccccccccccHHHHHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHHHHccccccccccccccccEEEEEEcccEEEEEEccccccccEEEEEEccccEEEEEcccccccccEEEEEEEcEEEEEEEcccccEEEEEcccEEEEEEEEccEEEEccccEEEEEcccccEEEEEEEEccccccccEEEEEEEEcccccEEEEEEEEEccEEEEEEcccccccccccccEEEEEccccccccccccccccccccccccccccccccccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccccEEccEEEcccccccccccccEEEEcccHHHHccccccccccccccccccccccccccccccc

ccccccccccccHHHHHccccccccHHHccccccccccccEEEcccccccccccccccccccccccccHHHHHHHHccHcccccccccEEEcccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccccccccccccEEEccccccEEEEEEccccccEEEEEEcccccEEEEEEEEcccccccEEEEEEEEEEEEEEcccccEEEEccccEEEEEEEEccEEEccccEEEEEEcccccEEEEEEEEcccccccccEEEEEEEEccccEEEEEEEcccccEEEEccccccccccccccEEEEEccccccccccccHHHHHHHHcccccccccccccccccHcHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEcccccccccccccEEEEccccHHHHHcccccccccccccEEEccccccccccccc

masdgskqgggfFASIAAGWSTFGSAMSKSvngllgyeglevvnpegstedaedEARRGRWKQEERDNYWKMMQKYIGAdvqslvtlpvfisepnSVLQRMAELMEYSHLldladecedpyMRLVYASSWALSIYFAYRRawkpfnpvlgeTFEMVNHGGVTFIaeqvshhppmsaghaenehfIYDVTSKLRTKFlgnsidvypvgrtrvtlkrdgvvldlvppptkvhnlifgrtwidspgdmvmtnlttgdkvvlyfqpcgwfgagryevdgyvydaaeqpkilmtgkwnesmsyqpcdsegeplpgtelkevwrvadapeddkyqYTYFThklnsfdtapkkllpsdsrlrpdryalekgdlskagsekSRLEERQRAEKRIREakddmftpkwfdlsdevtptpwgdlevyryngkyselratldnseslgeinpettefnpwqyedsaae

masdgskqggGFFASIAAGWSTFGSAMSKSVNGLLGYEGLEvvnpegstedaedearrgrwkqeerdNYWKMMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIYFAYRRAWKPFNPVLGETFEMVNHGGVTFIAEQVSHHPPMSAGHAENEHFIYDVTSKLRTKFLgnsidvypvgrtrvtlkrdgvvldlvppptkvhnlifgrtwidspGDMVMTNLTTGDKVVLYFQPCGWFGAGRYEVDGYVYDAAEQPKILMTGKWNESMSYQPCDSEGEPLPGTELKEVWRVADAPEDDKYQYTYFthklnsfdtapkkllpsdsrlrpdryalekgdlskagseksrleerQRAEKRireakddmftpkwfdlsdevtptpwgdLEVYRYNGKYSELRAtldnseslgeinpettefnpwqyedsaae

**********GFFASIAAGWSTFGSAMSKSVNGLLGYEGLEVV***********************DNYWKMMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIYFAYRRAWKPFNPVLGETFEMVNHGGVTFIAEQVSH********AENEHFIYDVTSKLRTKFLGNSIDVYPVGRTRVTLKRDGVVLDLVPPPTKVHNLIFGRTWIDSPGDMVMTNLTTGDKVVLYFQPCGWFGAGRYEVDGYVYDAAEQPKILMTGKWN*******************LKEVWRVADAPEDDKYQYTYFTHKLNSF*****************************************************FTPKWFDLSDEVTPTPWGDLEVYRYNGKYSELR******************************

*********************************************************************WKMMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIYFAYRRAWKPFNPVLGETFEMVNHGGVTFIAEQVSHHPPMSAGHAENEHFIYDVTSKLRTKFLGNSIDVYPVGRTRVTLKRDGVVLDLVPPPTKVHNLIFGRTWIDSPGDMVMTNLTTGDKVVLYFQPCGWFGAGRYEVDGYVYDAAEQPKILMTGKWNESMSYQPCD*******GTELKEVWRVADAPEDDKYQYTYFTHKLNSFDTAPKKLLPSDSRLRPDRYALEKGDLSKAGSEKSRLEE****************TPKWFDLSDEVTPTPWGDLEVYRYNGKYSELRATLDNSESLGEINPETTEFN**********

********GGGFFASIAAGWSTFGSAMSKSVNGLLGYEGLEVVNP******************EERDNYWKMMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIYFAYRRAWKPFNPVLGETFEMVNHGGVTFIAEQVSHHPPMSAGHAENEHFIYDVTSKLRTKFLGNSIDVYPVGRTRVTLKRDGVVLDLVPPPTKVHNLIFGRTWIDSPGDMVMTNLTTGDKVVLYFQPCGWFGAGRYEVDGYVYDAAEQPKILMTGKWNESM*********EPLPGTELKEVWRVADAPEDDKYQYTYFTHKLNSFDTAPKKLLPSDSRLRPDRYALEKG********************RIREAKDDMFTPKWFDLSDEVTPTPWGDLEVYRYNGKYSELRATLDNSESLGEINPETTEFNPWQYEDSAAE

*********************************LLGYEGLE*VNP**********ARRGR***EERDNYWKMMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIYFAYRRAWKPFNPVLGETFEMVNHGGVTFIAEQVSHHPPMSAGHAENEHFIYDVTSKLRTKFLGNSIDVYPVGRTRVTLKRDGVVLDLVPPPTKVHNLIFGRTWIDSPGDMVMTNLTTGDKVVLYFQPCGWFGAGRYEVDGYVYDAAEQPKILMTGKWNESMSYQPCDSEGEPLPGTELKEVWRVADAPEDDKYQYTYFTHKLNSFDTAPKKLLPSDSRLRPDRYALEKGDLSKAGSEKSRLEERQRAEKRIREAKDDMFTPKWFDLSDEVTPTPWGDLEVYRYNGKYSELRATLDNSESLGEINPETTEFNPWQYE*****

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MASDGSKQGGGFFASIAAGWSTFGSAMSKSVNGLLGYEGLEVVNPEGSTEDAEDEARRGRWKQEERDNYWKMMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIYFAYRRAWKPFNPVLGETFEMVNHGGVTFIAEQVSHHPPMSAGHAENEHFIYDVTSKLRTKFLGNSIDVYPVGRTRVTLKRDGVVLDLVPPPTKVHNLIFGRTWIDSPGDMVMTNLTTGDKVVLYFQPCGWFGAGRYEVDGYVYDAAEQPKILMTGKWNESMSYQPCDSEGEPLPGTELKEVWRVADAPEDDKYQYTYFTHKLNSFDTAPKKLLPSDSRLRPDRYALEKGDLSKAGSxxxxxxxxxxxxxxxxxxxxxMFTPKWFDLSDEVTPTPWGDLEVYRYNGKYSELRATLDNSESLGEINPETTEFNPWQYEDSAAE

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		456	2.2.26 [Sep-21-2011]
Q9LZM1		453	Oxysterol-binding protein	yes	no	0.993	1.0	0.782	0.0
Q9SR33		458	Oxysterol-binding protein	no	no	0.962	0.958	0.786	0.0
Q93Y40		457	Oxysterol-binding protein	no	no	1.0	0.997	0.743	0.0
Q54QP6		402	Oxysterol-binding protein	yes	no	0.807	0.915	0.373	7e-61
Q8K4M9		950	Oxysterol-binding protein	yes	no	0.763	0.366	0.342	2e-56
Q9BXW6		950	Oxysterol-binding protein	yes	no	0.758	0.364	0.335	4e-56
Q9H4L5		887	Oxysterol-binding protein	no	no	0.747	0.384	0.356	4e-56
Q54ID7		571	Oxysterol-binding protein	no	no	0.769	0.614	0.331	6e-56
Q91XL9		950	Oxysterol-binding protein	no	no	0.763	0.366	0.340	9e-56
Q9BZF3		934	Oxysterol-binding protein	no	no	0.706	0.344	0.371	4e-54

>sp\|Q9LZM1\|ORP3A_ARATH Oxysterol-binding protein-related protein 3A OS=Arabidopsis thaliana GN=ORP3A PE=1 SV=1	Back alignment and function desciption

 Score =  772 bits (1993), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/455 (78%), Positives = 412/455 (90%), Gaps = 2/455 (0%)

Query: 1   MASDGSKQGGGFFASIAAGWSTFGSAMSKSVNGLLGYEGLEVVNPEGSTEDAEDEARRGR 60
           MAS+  K GGGFFAS+A+  + FGSAMSKSVNGL+GYEGLEV+NPEGST+DAE+EA RGR
Sbjct: 1   MASNDPKNGGGFFASLASSITNFGSAMSKSVNGLMGYEGLEVINPEGSTDDAEEEAGRGR 60

Query: 61  WKQEERDNYWKMMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDP 120
           WKQEERD YWKMMQKYIG+DV S+VTLPV I EP ++LQ+MAELMEYS+LLD+AD+ EDP
Sbjct: 61  WKQEERDGYWKMMQKYIGSDVTSMVTLPVIIFEPMTMLQKMAELMEYSYLLDMADKTEDP 120

Query: 121 YMRLVYASSWALSIYFAYRRAWKPFNPVLGETFEMVNHGGVTFIAEQVSHHPPMSAGHAE 180
           YMR+VYASSWA+S+Y+AY+R WKPFNP+LGET+EM NH G+ FIAEQV HHPPMSAGHAE
Sbjct: 121 YMRMVYASSWAISVYYAYQRTWKPFNPILGETYEMTNHNGINFIAEQVCHHPPMSAGHAE 180

Query: 181 NEHFIYDVTSKLRTKFLGNSIDVYPVGRTRVTLKRDGVVLDLVPPPTKVHNLIFGRTWID 240
           NEHF YD TSKL+TKFLGNSIDVYPVGRTRVTLKRDGVVLDLVPP TKVHNLIFGRTW+D
Sbjct: 181 NEHFAYDCTSKLKTKFLGNSIDVYPVGRTRVTLKRDGVVLDLVPPLTKVHNLIFGRTWVD 240

Query: 241 SPGDMVMTNLTTGDKVVLYFQPCGWFGAGRYEVDGYVYDAAEQPKILMTGKWNESMSYQP 300
           SPG+MVMTNLTTGDKVVLYFQPCGWFG+GRYEVDGYVY++AE+PK+LMTGKWNES+SYQP
Sbjct: 241 SPGEMVMTNLTTGDKVVLYFQPCGWFGSGRYEVDGYVYNSAEEPKMLMTGKWNESLSYQP 300

Query: 301 CDSEGEPLPGTELKEVWRVADAPEDDKYQYTYFTHKLNSFDTAPKKLLPSDSRLRPDRYA 360
           CD+EGEPLPGTELKEVW+VA+AP++DKYQYT+F HK+NSFDTAPKKLL SDSRLRPDRYA
Sbjct: 301 CDAEGEPLPGTELKEVWKVAEAPKNDKYQYTHFAHKINSFDTAPKKLLSSDSRLRPDRYA 360

Query: 361 LEKGDLSKAGSEKSRLEERQRAEKRIREAKDDMFTPKWFDLSDEVTPTPWGDLEVYRYNG 420
           LE GD+SK+G EKS LE+RQRAEK+ RE K   F PKWFD ++EVTPTPWGDLEVY++NG
Sbjct: 361 LEMGDMSKSGFEKSSLEDRQRAEKKSREEKGQKFAPKWFDETEEVTPTPWGDLEVYQFNG 420

Query: 421 KYSELRATLDNSESLGEINPETTEFNPWQYEDSAA 455
           KYS  RAT +NSE   ++  + T+FNPWQ++D +A
Sbjct: 421 KYSVHRATAENSEDTTDV--KLTQFNPWQFQDLSA 453

Oxysterol-binding protein that may be involved in the transport of sterols between the ER and the Golgi. Binds beta-sitosterol. Required for ovule fertilization.
Arabidopsis thaliana (taxid: 3702)

>sp\|Q9SR33\|ORP3B_ARATH Oxysterol-binding protein-related protein 3B OS=Arabidopsis thaliana GN=ORP3B PE=2 SV=1	Back alignment and function description

>sp\|Q93Y40\|ORP3C_ARATH Oxysterol-binding protein-related protein 3C OS=Arabidopsis thaliana GN=ORP3C PE=2 SV=1	Back alignment and function description

>sp\|Q54QP6\|OSB8_DICDI Oxysterol-binding protein 8 OS=Dictyostelium discoideum GN=osbH PE=1 SV=1	Back alignment and function description

>sp\|Q8K4M9\|OSBL1_RAT Oxysterol-binding protein-related protein 1 OS=Rattus norvegicus GN=Osbpl1a PE=1 SV=1	Back alignment and function description

>sp\|Q9BXW6\|OSBL1_HUMAN Oxysterol-binding protein-related protein 1 OS=Homo sapiens GN=OSBPL1A PE=1 SV=2	Back alignment and function description

>sp\|Q9H4L5\|OSBL3_HUMAN Oxysterol-binding protein-related protein 3 OS=Homo sapiens GN=OSBPL3 PE=1 SV=1	Back alignment and function description

>sp\|Q54ID7\|OSB11_DICDI Oxysterol-binding protein 11 OS=Dictyostelium discoideum GN=osbK PE=3 SV=1	Back alignment and function description

>sp\|Q91XL9\|OSBL1_MOUSE Oxysterol-binding protein-related protein 1 OS=Mus musculus GN=Osbpl1a PE=1 SV=2	Back alignment and function description

>sp\|Q9BZF3\|OSBL6_HUMAN Oxysterol-binding protein-related protein 6 OS=Homo sapiens GN=OSBPL6 PE=1 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		456
255583115		456	oxysterol binding protein, putative [Ric	1.0	1.0	0.782	0.0
356558019		456	PREDICTED: oxysterol-binding protein-rel	1.0	1.0	0.778	0.0
297806135		453	hypothetical protein ARALYDRAFT_324883 [	0.993	1.0	0.784	0.0
15241681		453	Oxysterol-binding family protein [Arabid	0.993	1.0	0.782	0.0
225434911		456	PREDICTED: oxysterol-binding protein-rel	1.0	1.0	0.774	0.0
297829460		456	oxysterol-binding family protein [Arabid	0.982	0.982	0.783	0.0
15232633		458	OSBP(oxysterol binding protein)-related	0.962	0.958	0.786	0.0
297793497		457	oxysterol-binding family protein [Arabid	1.0	0.997	0.757	0.0
343172148		455	oxysterol-binding protein, partial [Sile	0.980	0.982	0.762	0.0
359482105		499	PREDICTED: oxysterol-binding protein-rel	0.969	0.885	0.769	0.0

>gi\|255583115\|ref\|XP_002532324.1\| oxysterol binding protein, putative [Ricinus communis] gi\|223527967\|gb\|EEF30051.1\| oxysterol binding protein, putative [Ricinus communis]	Back alignment and taxonomy information

 Score =  779 bits (2012), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/456 (78%), Positives = 417/456 (91%)

Query: 1   MASDGSKQGGGFFASIAAGWSTFGSAMSKSVNGLLGYEGLEVVNPEGSTEDAEDEARRGR 60
           MA +  KQ GGFF+SIA+  S FG+AMS+SVNGLLGYEGLEV+NPEG  EDAE+EA+RGR
Sbjct: 1   MAPNDPKQSGGFFSSIASSLSNFGTAMSRSVNGLLGYEGLEVINPEGGNEDAEEEAKRGR 60

Query: 61  WKQEERDNYWKMMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDP 120
           W+QE+RD+YWKMMQKYIG+DV S+VTLPV I EP S+LQ+MAELMEYSHLLDLADECEDP
Sbjct: 61  WRQEDRDSYWKMMQKYIGSDVTSMVTLPVLIFEPMSMLQKMAELMEYSHLLDLADECEDP 120

Query: 121 YMRLVYASSWALSIYFAYRRAWKPFNPVLGETFEMVNHGGVTFIAEQVSHHPPMSAGHAE 180
           YMRLVYA+S+ +S+Y+AY+R WKPFNP+LGET+E+VNHGG+TFI+EQVSHHPP+SAGHAE
Sbjct: 121 YMRLVYAASFFISVYYAYQRTWKPFNPILGETYELVNHGGLTFISEQVSHHPPISAGHAE 180

Query: 181 NEHFIYDVTSKLRTKFLGNSIDVYPVGRTRVTLKRDGVVLDLVPPPTKVHNLIFGRTWID 240
           +EHF YD+TSK++TKFLGNSI++YP+GRTRVTLKRDGVVLDLVPP TKV NLIFGRTWID
Sbjct: 181 SEHFTYDITSKVKTKFLGNSIEIYPLGRTRVTLKRDGVVLDLVPPLTKVSNLIFGRTWID 240

Query: 241 SPGDMVMTNLTTGDKVVLYFQPCGWFGAGRYEVDGYVYDAAEQPKILMTGKWNESMSYQP 300
           SPG+MV+TN+TTGDKVVLYFQPCGWFGAGRYEVDGYVY++AE+PK+LMTGKWNESMSYQP
Sbjct: 241 SPGEMVLTNMTTGDKVVLYFQPCGWFGAGRYEVDGYVYNSAEEPKVLMTGKWNESMSYQP 300

Query: 301 CDSEGEPLPGTELKEVWRVADAPEDDKYQYTYFTHKLNSFDTAPKKLLPSDSRLRPDRYA 360
           CD EGEP PGTELKEVWRVA+AP++DKYQ+T+F HK+NSFDTAPKKLL SDSRLRPDRYA
Sbjct: 301 CDLEGEPRPGTELKEVWRVAEAPKNDKYQFTHFAHKINSFDTAPKKLLASDSRLRPDRYA 360

Query: 361 LEKGDLSKAGSEKSRLEERQRAEKRIREAKDDMFTPKWFDLSDEVTPTPWGDLEVYRYNG 420
           LEKGDLSKAG EKS LEERQRAEKR REAK   F PKWFD + E+ PTPWGDLEVY+YNG
Sbjct: 361 LEKGDLSKAGHEKSSLEERQRAEKRNREAKGQQFVPKWFDQTSEIHPTPWGDLEVYQYNG 420

Query: 421 KYSELRATLDNSESLGEINPETTEFNPWQYEDSAAE 456
           KY+E R+ +D+S+S+ EI+  + EFNPWQY+ +AAE
Sbjct: 421 KYTEHRSAVDSSDSIEEIHFGSIEFNPWQYDSAAAE 456

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|356558019\|ref\|XP_003547306.1\| PREDICTED: oxysterol-binding protein-related protein 3C-like [Glycine max]	Back alignment and taxonomy information

>gi\|297806135\|ref\|XP_002870951.1\| hypothetical protein ARALYDRAFT_324883 [Arabidopsis lyrata subsp. lyrata] gi\|297316788\|gb\|EFH47210.1\| hypothetical protein ARALYDRAFT_324883 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi|15241681|ref|NP_195830.1| Oxysterol-binding family protein [Arabidopsis thaliana] gi|75264475|sp|Q9LZM1.1|ORP3A_ARATH RecName: Full=Oxysterol-binding protein-related protein 3A; AltName: Full=OSBP-related protein 3A; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 18 gi|7340684|emb|CAB82983.1| putative protein [Arabidopsis thaliana] gi|15292811|gb|AAK92774.1| unknown protein [Arabidopsis thaliana] gi|20258867|gb|AAM14105.1| putative oxysterol-binding protein [Arabidopsis thaliana] gi|332003048|gb|AED90431.1| Oxysterol-binding family protein [Arabidopsis thaliana]

Back alignment and taxonomy information

>gi\|225434911\|ref\|XP_002283434.1\| PREDICTED: oxysterol-binding protein-related protein 3C [Vitis vinifera] gi\|297746058\|emb\|CBI16114.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|297829460\|ref\|XP_002882612.1\| oxysterol-binding family protein [Arabidopsis lyrata subsp. lyrata] gi\|297328452\|gb\|EFH58871.1\| oxysterol-binding family protein [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi|15232633|ref|NP_187541.1| OSBP(oxysterol binding protein)-related protein 3B [Arabidopsis thaliana] gi|75266215|sp|Q9SR33.1|ORP3B_ARATH RecName: Full=Oxysterol-binding protein-related protein 3B; AltName: Full=OSBP-related protein 3B gi|6478922|gb|AAF14027.1|AC011436_11 putative oxysterol-binding protein [Arabidopsis thaliana] gi|17065254|gb|AAL32781.1| putative oxysterol-binding protein [Arabidopsis thaliana] gi|20260050|gb|AAM13372.1| putative oxysterol-binding protein [Arabidopsis thaliana] gi|332641227|gb|AEE74748.1| OSBP(oxysterol binding protein)-related protein 3B [Arabidopsis thaliana]

Back alignment and taxonomy information

>gi\|297793497\|ref\|XP_002864633.1\| oxysterol-binding family protein [Arabidopsis lyrata subsp. lyrata] gi\|297310468\|gb\|EFH40892.1\| oxysterol-binding family protein [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|343172148\|gb\|AEL98778.1\| oxysterol-binding protein, partial [Silene latifolia]	Back alignment and taxonomy information

>gi\|359482105\|ref\|XP_002267148.2\| PREDICTED: oxysterol-binding protein-related protein 3A [Vitis vinifera]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		456
TAIR\|locus:2185163		453	UNE18 "UNFERTILIZED EMBRYO SAC	0.993	1.0	0.782	7.7e-206
TAIR\|locus:2083594		458	ORP3B "OSBP(oxysterol binding	0.969	0.965	0.786	4.4e-203
TAIR\|locus:2148368		457	ORP3C "OSBP(oxysterol binding	1.0	0.997	0.746	5.8e-201
UNIPROTKB\|F1SBB0		743	OSBPL1A "Oxysterol-binding pro	0.504	0.309	0.390	1.2e-59
DICTYBASE\|DDB_G0283709		402	osbH "oxysterol binding family	0.837	0.950	0.374	2.2e-59
UNIPROTKB\|Q9BXW6		950	OSBPL1A "Oxysterol-binding pro	0.504	0.242	0.394	1.5e-58
UNIPROTKB\|E2RMD4		950	OSBPL1A "Oxysterol-binding pro	0.504	0.242	0.394	2e-58
ZFIN\|ZDB-GENE-091116-46		467	osbpl2a "oxysterol binding pro	0.537	0.524	0.368	2.9e-58
UNIPROTKB\|E1BLV1		952	OSBPL1A "Oxysterol-binding pro	0.504	0.241	0.394	4.1e-58
MGI\|MGI:1927551		950	Osbpl1a "oxysterol binding pro	0.504	0.242	0.394	6.5e-58

TAIR\|locus:2185163 UNE18 "UNFERTILIZED EMBRYO SAC 18" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1991 (705.9 bits), Expect = 7.7e-206, P = 7.7e-206
 Identities = 356/455 (78%), Positives = 412/455 (90%)

Query:     1 MASDGSKQGGGFFASIAAGWSTFGSAMSKSVNGLLGYEGLEVVNPEGSTEDAEDEARRGR 60
             MAS+  K GGGFFAS+A+  + FGSAMSKSVNGL+GYEGLEV+NPEGST+DAE+EA RGR
Sbjct:     1 MASNDPKNGGGFFASLASSITNFGSAMSKSVNGLMGYEGLEVINPEGSTDDAEEEAGRGR 60

Query:    61 WKQEERDNYWKMMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDP 120
             WKQEERD YWKMMQKYIG+DV S+VTLPV I EP ++LQ+MAELMEYS+LLD+AD+ EDP
Sbjct:    61 WKQEERDGYWKMMQKYIGSDVTSMVTLPVIIFEPMTMLQKMAELMEYSYLLDMADKTEDP 120

Query:   121 YMRLVYASSWALSIYFAYRRAWKPFNPVLGETFEMVNHGGVTFIAEQVSHHPPMSAGHAE 180
             YMR+VYASSWA+S+Y+AY+R WKPFNP+LGET+EM NH G+ FIAEQV HHPPMSAGHAE
Sbjct:   121 YMRMVYASSWAISVYYAYQRTWKPFNPILGETYEMTNHNGINFIAEQVCHHPPMSAGHAE 180

Query:   181 NEHFIYDVTSKLRTKFLGNSIDVYPVGRTRVTLKRDGVVLDLVPPPTKVHNLIFGRTWID 240
             NEHF YD TSKL+TKFLGNSIDVYPVGRTRVTLKRDGVVLDLVPP TKVHNLIFGRTW+D
Sbjct:   181 NEHFAYDCTSKLKTKFLGNSIDVYPVGRTRVTLKRDGVVLDLVPPLTKVHNLIFGRTWVD 240

Query:   241 SPGDMVMTNLTTGDKVVLYFQPCGWFGAGRYEVDGYVYDAAEQPKILMTGKWNESMSYQP 300
             SPG+MVMTNLTTGDKVVLYFQPCGWFG+GRYEVDGYVY++AE+PK+LMTGKWNES+SYQP
Sbjct:   241 SPGEMVMTNLTTGDKVVLYFQPCGWFGSGRYEVDGYVYNSAEEPKMLMTGKWNESLSYQP 300

Query:   301 CDSEGEPLPGTELKEVWRVADAPEDDKYQYTYFTHKLNSFDTAPKKLLPSDSRLRPDRYA 360
             CD+EGEPLPGTELKEVW+VA+AP++DKYQYT+F HK+NSFDTAPKKLL SDSRLRPDRYA
Sbjct:   301 CDAEGEPLPGTELKEVWKVAEAPKNDKYQYTHFAHKINSFDTAPKKLLSSDSRLRPDRYA 360

Query:   361 LEKGDLSKAGSEKSRLEERQRAEKRIREAKDDMFTPKWFDLSDEVTPTPWGDLEVYRYNG 420
             LE GD+SK+G EKS LE+RQRAEK+ RE K   F PKWFD ++EVTPTPWGDLEVY++NG
Sbjct:   361 LEMGDMSKSGFEKSSLEDRQRAEKKSREEKGQKFAPKWFDETEEVTPTPWGDLEVYQFNG 420

Query:   421 KYSELRATLDNSESLGEINPETTEFNPWQYEDSAA 455
             KYS  RAT +NSE   ++  + T+FNPWQ++D +A
Sbjct:   421 KYSVHRATAENSEDTTDV--KLTQFNPWQFQDLSA 453

GO:0005634 "nucleus" evidence=ISM

GO:0008142 "oxysterol binding" evidence=ISS

GO:0008202 "steroid metabolic process" evidence=ISS

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0032934 "sterol binding" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=RCA

TAIR\|locus:2083594 ORP3B "OSBP(oxysterol binding protein)-related protein 3B" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2148368 ORP3C "OSBP(oxysterol binding protein)-related protein 3C" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

UNIPROTKB\|F1SBB0 OSBPL1A "Oxysterol-binding protein" [Sus scrofa (taxid:9823)]	Back alignment and assigned GO terms

DICTYBASE\|DDB_G0283709 osbH "oxysterol binding family protein, member 8" [Dictyostelium discoideum (taxid:44689)]	Back alignment and assigned GO terms

UNIPROTKB\|Q9BXW6 OSBPL1A "Oxysterol-binding protein-related protein 1" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|E2RMD4 OSBPL1A "Oxysterol-binding protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-091116-46 osbpl2a "oxysterol binding protein-like 2a" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

UNIPROTKB\|E1BLV1 OSBPL1A "Oxysterol-binding protein" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

MGI\|MGI:1927551 Osbpl1a "oxysterol binding protein-like 1A" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q93Y40	ORP3C_ARATH	No assigned EC number	0.7439	1.0	0.9978	no	no
Q54QP6	OSB8_DICDI	No assigned EC number	0.3730	0.8070	0.9154	yes	no
Q9SR33	ORP3B_ARATH	No assigned EC number	0.7868	0.9627	0.9585	no	no
Q9LZM1	ORP3A_ARATH	No assigned EC number	0.7824	0.9934	1.0	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		456
pfam01237		335	pfam01237, Oxysterol_BP, Oxysterol-binding protein	1e-141

>gnl\|CDD\|216381 pfam01237, Oxysterol_BP, Oxysterol-binding protein	Back alignment and domain information

 Score =  407 bits (1048), Expect = e-141
 Identities = 145/343 (42%), Positives = 205/343 (59%), Gaps = 15/343 (4%)

Query: 88  PVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIYFA--YRRAWKPF 145
           PVF +EP S+LQR+AE +EY  LLD A + +DP  R++Y +++A+S Y +   RR  KPF
Sbjct: 1   PVFFNEPLSLLQRLAEDLEYPDLLDKAAKEDDPLERMLYVAAFAVSTYSSTRKRRTKKPF 60

Query: 146 NPVLGETFEMVNH-GGVTFIAEQVSHHPPMSAGHAENEHFIYDVTSKLRTKFLGNSIDVY 204
           NP+LGETFE+V   GG  FI+EQVSHHPP+SA HAE++ +    +S  ++KF G SI+V 
Sbjct: 61  NPLLGETFELVREDGGFRFISEQVSHHPPISAYHAESKGWTLWGSSAPKSKFWGKSIEVK 120

Query: 205 PVGRTRVTLKRDGVVLDLVPPPTKVHNLIFGRTWIDSPGDMVMTNLTTGDKVVLYFQPCG 264
           P G   +TLK+ G       P T +HN+IFG+ +++  G+M + N TTG K V+ F+  G
Sbjct: 121 PEGHAHLTLKKTGEHYTWTKPTTHIHNIIFGKPYVELYGEMYIKNSTTGYKAVIEFKKKG 180

Query: 265 WFGAGRYEVDGYVYDAAEQPKILMTGKWNESMSYQPCDSEGEPLPGTELKEVWRVADAPE 324
           WF   + EV+G VYD   +    ++GKWNES+  +   S        E K +W+    P 
Sbjct: 181 WFSGRKNEVEGKVYDKKGKVLYTISGKWNESLYIKKVKSS-----TGEKKLLWKANPLPP 235

Query: 325 D--DKYQYTYFTHKLNSFDTAPK-KLLPSDSRLRPDRYALEKGDLSKAGSEKSRLEERQR 381
           +    Y +T F   LN      K +L P+DSRLRPD+ ALE+GD  +A  EK RLEE+QR
Sbjct: 236 NSEKVYGFTKFAIPLNELTPELKEELPPTDSRLRPDQRALEEGDYDEAEEEKLRLEEKQR 295

Query: 382 AEKRIREAKDDMFTPKWFDLSDEVTPTPWGDLEVYRYNGKYSE 424
             ++ RE K + + P+WF    +    P    E + Y G Y E
Sbjct: 296 ERRKEREEKGEEWKPRWFVKVKD----PLTGEEDWVYKGGYWE 334

Length = 335

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		456
KOG1737		799	consensus Oxysterol-binding protein [Lipid transpo	100.0
KOG2209		445	consensus Oxysterol-binding protein [Signal transd	100.0
PF01237		354	Oxysterol_BP: Oxysterol-binding protein ; InterPro	100.0
KOG2210		392	consensus Oxysterol-binding protein [Signal transd	100.0

>KOG1737 consensus Oxysterol-binding protein [Lipid transport and metabolism]	Back alignment and domain information

Probab=100.00  E-value=7.1e-102  Score=838.27  Aligned_cols=419  Identities=41%  Similarity=0.654  Sum_probs=384.3

Q ss_pred             CCCcceeeecccccccccccccccccccCCCCCcccCCCC-CCcchhhhhhhcccccccchhHHHHHHhccCcccCCCcc
Q 012776            8 QGGGFFASIAAGWSTFGSAMSKSVNGLLGYEGLEVVNPEG-STEDAEDEARRGRWKQEERDNYWKMMQKYIGADVQSLVT   86 (456)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~g~~~~e~~~siw~~lk~~IG~DLts~vs   86 (456)
                      .+.+++.+.+|+++..+.++..++++..........+++. +.++...+......+.+.+.++|++||++||+||| +|+
T Consensus       372 ~~s~~~~s~~s~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~rr~~lp~~~~~~~~islw~~~k~~iGkDls-kv~  450 (799)
T KOG1737|consen  372 EGSEDEESYTSDISDNGSSDALSADGDKSSQALNEKVPSGSGAEVARRTNLPAPSKPSSSISLWSILRNNIGKDLS-KVS  450 (799)
T ss_pred             cccccccccccccccCCCccccccccccccccccccccccccccccccccCCCCcCcCCCccHHHHHhhccccccc-ccc
Confidence            3456888999988888888888888877776666666665 22222222222323466778999999999999998 599


Q ss_pred             cCcccccccchHHHhhhccccHHHHhhhhcCCChHHHHHHHHHHHhhhhh-hccccCCCCCCCCCCeEEEEecC-cEEEE
Q 012776           87 LPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIYF-AYRRAWKPFNPVLGETFEMVNHG-GVTFI  164 (456)
Q Consensus        87 lPv~i~EP~S~LQr~ae~~ey~~lL~~Aa~~~dp~eRm~~V~af~iS~~~-~~~r~~KPfNPILGETfe~~~~~-g~~fi  164 (456)
                      |||.||||+|+|||++|+|||++||++|++++||++||++|+||++|+|. ..+|.+|||||||||||||.+.+ |+|||
T Consensus       451 ~PV~~nEP~S~LQr~~EdlEYs~LLd~A~~~~d~~~R~~~vaafavS~Ya~t~~r~~KPFNPlLgETyE~~r~dkg~rf~  530 (799)
T KOG1737|consen  451 MPVEFNEPLSLLQRVAEDLEYSELLDKAANYEDPLERMVYVAAFAVSSYSSTSRRTAKPFNPLLGETYEMDRPDKGLRFF  530 (799)
T ss_pred             cceecCCcchHHHHhhhhccchhhhHHHHhcCCcHHHHHHHHHHHhhhcchhcccccCCCCcccccceEeeccCCceeee
Confidence            99999999999999999999999999999999999999999999999994 46799999999999999999854 89999


Q ss_pred             eeecccCCcceEEEEeCceEEEEEeeeeeeeEEeeEEEEEEeeEEEEEEcCCcEEEEEeCCCceeeeeeccceeEecCCc
Q 012776          165 AEQVSHHPPMSAGHAENEHFIYDVTSKLRTKFLGNSIDVYPVGRTRVTLKRDGVVLDLVPPPTKVHNLIFGRTWIDSPGD  244 (456)
Q Consensus       165 aEQVSHHPPISAf~~e~~~~~~~~~~~~kskF~G~Sv~v~~~G~~~l~l~~~ge~Y~~~~P~~~v~nii~G~~~ve~~G~  244 (456)
                      +|||||||||+|+|||+++|.|++++.+++||||+||+|.|+|..+|+|+.+|++|+|.+|++.|+|||+|++|+|++|+
T Consensus       531 sEqVSHhPPi~A~h~es~~w~~~~ds~~~sKF~Gksi~v~P~G~l~l~~~~~G~~~~w~kvtt~v~nii~Gk~~~D~~ge  610 (799)
T KOG1737|consen  531 SEQVSHHPPISACHAESNNWTFWGDSKVKSKFWGKSIEVPPLGILHVTLKNIGEHYSWAKVTTTVHNIILGKLWVDHYGE  610 (799)
T ss_pred             eeeeccCCCcccccccCCCceeeccccccccccccceeecCCceEEEEEcCCCccccccCccceecceeecccccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEeCCCC-CEEEEEEeeCccccCceeEEEEEEECCCCCceEEEeeeecceeeeeeCCCCCCcCCCCCceEEEeeccCC
Q 012776          245 MVMTNLTTG-DKVVLYFQPCGWFGAGRYEVDGYVYDAAEQPKILMTGKWNESMSYQPCDSEGEPLPGTELKEVWRVADAP  323 (456)
Q Consensus       245 ~~I~~~~tg-~~a~i~F~~~~~~g~~~~~V~G~V~~~~g~~~~~i~G~W~~~l~~~~~~~~g~~l~~~~~~~lW~~~~~p  323 (456)
                      |.|++++++ ++|.|+|++.+||+.+.++|.|.|++.+|++++++.|+|++.|++..++..|.+.+.+..+++|++++.|
T Consensus       611 ~~i~n~~~~~~~c~L~F~~~~~~~~~~~ev~g~V~~~s~~~~~~l~GkW~e~~~~~~~~~~~~~~~~~~~~~iWk~~~~P  690 (799)
T KOG1737|consen  611 MEITNHTTGSDKCKLKFVKAGYFSRNAREVEGSVRNKSGKKVEVLTGKWDESLYYFKVDKVGLPEPETSEKLIWKANDLP  690 (799)
T ss_pred             EEEecCCCCcceeEEEEeeecccCCCcceeEEEEeCCCCceeEEEeeeehhhhhhccccccccccCCccceeeeecCCCC
Confidence            999999999 7999999999999999999999999999999999999999999999999888888888899999999999


Q ss_pred             CCCccccceeecccCCCCCCC-CcCCCCCcccchhhHHHHcCCchhhHHHHHHHHHHHHHHHHHHHhcCCCceecceeec
Q 012776          324 EDDKYQYTYFTHKLNSFDTAP-KKLLPSDSRLRPDRYALEKGDLSKAGSEKSRLEERQRAEKRIREAKDDMFTPKWFDLS  402 (456)
Q Consensus       324 ~~~~~~ft~fa~~lN~~~~~~-~~l~PtDSR~R~D~~aLe~Gd~~~A~~eK~~LEe~QR~~rk~R~~~~~~w~Pr~F~~~  402 (456)
                      ++.+|+||.||++||++++.+ +.|+|||||+|||+|+||+|+|++|..||.+|||+||++|+.|++.+.+|+||||.+.
T Consensus       691 kn~~y~ft~fai~LNel~p~l~~~lpPTDSRlRPDqr~lE~G~~~~a~~EK~rlEe~QR~~r~~re~~~~~~~prwF~~~  770 (799)
T KOG1737|consen  691 KNNKYNFTGFAIELNELTPHLKKLLPPTDSRLRPDQRALENGEYDEANAEKLRLEEKQRARRRKREENGEEYEPRWFEKV  770 (799)
T ss_pred             CCcccccchhheecccCCchhhccCCCCCcccCcchhhhhccChhhhhhhhHhHHHHHHHHHHHHHhhcccccccccccc
Confidence            999999999999999999855 5677899999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCcceEEEcCcchhccccCCCCCC
Q 012776          403 DEVTPTPWGDLEVYRYNGKYSELRATLDNSES  434 (456)
Q Consensus       403 ~d~~~~~~~~~~~~~y~g~Yw~~r~~~~~~~~  434 (456)
                      .++.+       .|+|+|+||++|++.+|..+
T Consensus       771 ~~~~~-------~~~~ng~Ywe~r~~~d~~~~  795 (799)
T KOG1737|consen  771 KDPST-------YWVYNGGYWEAREKQDWKDC  795 (799)
T ss_pred             CCCcc-------eEEecCchheeecccCcccc
Confidence            87642       79999999999999999865

>KOG2209 consensus Oxysterol-binding protein [Signal transduction mechanisms]	Back alignment and domain information

>PF01237 Oxysterol_BP: Oxysterol-binding protein ; InterPro: IPR000648 A number of eukaryotic proteins that seem to be involved with sterol synthesis and/or its regulation have been found [] to be evolutionary related	Back alignment and domain information

>KOG2210 consensus Oxysterol-binding protein [Signal transduction mechanisms]	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		456
1zht_A		438	Structure Of Yeast Oxysterol Binding Protein Osh4 I		4e-10
3spw_A		436	Structure Of Osh4pKES1P IN COMPLEX WITH PHOSPHATIDY		4e-10
1zi7_A		406	Structure Of Truncated Yeast Oxysterol Binding Prot		4e-07

>pdb|1ZHT|A Chain A, Structure Of Yeast Oxysterol Binding Protein Osh4 In Complex With 7-Hydroxycholesterol Length = 438

Back alignment and structure

Iteration: 1

Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 75/318 (23%), Positives = 131/318 (41%), Gaps = 45/318 (14%) Query: 116 ECEDPYM-RLVYASSWALSI----YFAYRRAW----KPFNPVLGETF-------EMVNHG 159 E E P + R++ + W +S Y + + KP NP LGE F E G Sbjct: 77 EVESPELARMLAVTKWFISTLKSQYCSRNESLGSEKKPLNPFLGELFVGKWENKEHPEFG 136 Query: 160 GVTFIAEQVSHHPPMSAGHAENEHFIYDVT--SKLRTKFLGN-SIDVYPVGRTRVTLKRD 216 ++EQVSHHPP++A N+ + ++++ F + + V G T + +K + Sbjct: 137 ETVLLSEQVSHHPPVTAFSIFNDKNKVKLQGYNQIKASFTKSLMLTVKQFGHTMLDIKDE 196 Query: 217 GVVLDLVPPPTKVHNLIFGRTWIDSPGDMVMTNLTTGDKVVLYFQPCGWFGAGRYEVDGY 276 + + PPP + ++ +++ G + + +TG V+ F G+F + Sbjct: 197 SYL--VTPPPLHIEGILVASPFVELEGKSYIQS-STGLLCVIEFSGRGYFSGKKNSFKAR 253 Query: 277 VY----DAAEQPKILMT--GKWNESMSYQPCDSEGEPLPGTELKEVWRVADAPEDDKYQY 330 +Y D+ ++ K L T G+W+ S + + E + + A P + Sbjct: 254 IYKDSKDSKDKEKALYTISGQWSGSSKIIKANKKEES------RLFYDAARIPAEH---- 303 Query: 331 TYFTHKLNSFDTAPKKLLPSDSRLRPDRYALEKGDLSKAGSEKSRLEERQRAEKRIREAK 390 LN + L S A++ GD + K+ LEE QR ++ EAK Sbjct: 304 ------LNVKPLEEQHPLESRKAWYDVAGAIKLGDFNLIAKTKTELEETQRELRKEEEAK 357 Query: 391 DDMFTPKWF-DLSDEVTP 407 + +WF D VTP Sbjct: 358 GISWQRRWFKDFDYSVTP 375

PyMOL of 1zht

>pdb|3SPW|A Chain A, Structure Of Osh4pKES1P IN COMPLEX WITH PHOSPHATIDYLINOSITOL 4- Phosphate Length = 436

Back alignment and structure

>pdb|1ZI7|A Chain A, Structure Of Truncated Yeast Oxysterol Binding Protein Osh4 Length = 406

Back alignment and structure

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		456
1zhx_A		438	KES1 protein; oxysterol,sterol binding protein, li	1e-103
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-07
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-06
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-05

>1zhx_A KES1 protein; oxysterol,sterol binding protein, lipid binding protein; HET: HC3; 1.50A {Saccharomyces cerevisiae} SCOP: d.338.1.1 PDB: 1zht_A* 1zhw_A* 1zhy_A* 1zhz_A* 3spw_A* 1zi7_A Length = 438	Back alignment and structure

 Score =  313 bits (802), Expect = e-103
 Identities = 82/431 (19%), Positives = 145/431 (33%), Gaps = 65/431 (15%)

Query: 49  TEDAEDEARRGRWKQEERDNYWKMMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYS 108
             D    A    W       + K +      D+ S ++ P FI  P S+ +      E+ 
Sbjct: 2   AMDPSQYASSSSWTS-----FLKSIAS-FNGDL-SSLSAPPFILSPISLTEFSQYWAEHP 54

Query: 109 HLLDLADECED----------------PYMRLVYASSWALSIY--------FAYRRAWKP 144
            L        D                   R++  + W +S           +     KP
Sbjct: 55  ELFLEPSFINDDNYKEHCLIDPEVESPELARMLAVTKWFISTLKSQYCSRNESLGSEKKP 114

Query: 145 FNPVLGETFEMV-------NHGGVTFIAEQVSHHPPMSAGHAENE--HFIYDVTSKLRTK 195
            NP LGE F            G    ++EQVSHHPP++A    N+         ++++  
Sbjct: 115 LNPFLGELFVGKWENKEHPEFGETVLLSEQVSHHPPVTAFSIFNDKNKVKLQGYNQIKAS 174

Query: 196 FLGNSIDVYPVGRTRVTLKRDGVVLDLVPPPTKVHNLIFGRTWIDSPGDMVMTNLTTGDK 255
           F   S+ +         L        + PPP  +  ++    +++  G   + + +TG  
Sbjct: 175 FTK-SLMLTVKQFGHTMLDIKDESYLVTPPPLHIEGILVASPFVELEGKSYIQS-STGLL 232

Query: 256 VVLYFQPCGWFGAGRYEVDGYVYDAA------EQPKILMTGKWNESMSYQPCDSEGEPLP 309
            V+ F   G+F   +      +Y  +      E+    ++G+W+ S      + + E   
Sbjct: 233 CVIEFSGRGYFSGKKNSFKARIYKDSKDSKDKEKALYTISGQWSGSSKIIKANKKEES-- 290

Query: 310 GTELKEVWRVADAPEDDKYQYTYFTHKLNSFDTAPKKLLPSDSRLRPDRYALEKGDLSKA 369
               +  +  A  P             LN      +  L S         A++ GD +  
Sbjct: 291 ----RLFYDAARIP----------AEHLNVKPLEEQHPLESRKAWYDVAGAIKLGDFNLI 336

Query: 370 GSEKSRLEERQRAEKRIREAKDDMFTPKWFDLSDEVTPTPWGDLEVYRYNGKYSELRATL 429
              K+ LEE QR  ++  EAK   +  +WF   D  + TP     V   +  + +L + L
Sbjct: 337 AKTKTELEETQRELRKEEEAKGISWQRRWFKDFDY-SVTPEEGALVPEKDDTFLKLASAL 395

Query: 430 DNSESLGEINP 440
           + S        
Sbjct: 396 NLSTKNAPSGT 406

PyMOL of 1zhx

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		456
1zhx_A		438	KES1 protein; oxysterol,sterol binding protein, li	100.0

>1zhx_A KES1 protein; oxysterol,sterol binding protein, lipid binding protein; HET: HC3; 1.50A {Saccharomyces cerevisiae} SCOP: d.338.1.1 PDB: 1zht_A* 1zhw_A* 1zhy_A* 1zhz_A* 3spw_A* 1zi7_A	Back alignment and structure

Probab=100.00  E-value=9e-90  Score=716.75  Aligned_cols=319  Identities=24%  Similarity=0.404  Sum_probs=285.5

Q ss_pred             ccchhHHHHHHhccCc---ccCCCcccCcccccccchHHHhhhccccHHHHhhhhcCC----------C------hHHHH
Q 012776           64 EERDNYWKMMQKYIGA---DVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECE----------D------PYMRL  124 (456)
Q Consensus        64 e~~~siw~~lk~~IG~---DLts~vslPv~i~EP~S~LQr~ae~~ey~~lL~~Aa~~~----------d------p~eRm  124 (456)
                      ..+.|+|+.++++||+   ||++ |+|||+||||+|+||+++++|+|++||++|+..+          |      |++||
T Consensus         8 ~~~~s~w~~~lK~i~k~g~DLSk-IslPv~i~EP~SlLE~~~~~~e~~dLL~~aa~~~~~~~~a~~~~D~~~~~~p~eRm   86 (438)
T 1zhx_A            8 YASSSSWTSFLKSIASFNGDLSS-LSAPPFILSPISLTEFSQYWAEHPELFLEPSFINDDNYKEHCLIDPEVESPELARM   86 (438)
T ss_dssp             HTTSHHHHHHHHTTTTCCSCGGG-SCCCGGGEEEEEGGGGGGGGCSCHHHHHGGGGCCTTTGGGSCTTCTTCSCHHHHHH
T ss_pred             cccccHHHHHHHHhhhcCCChhh-cccCchhcCCccHHHHHHHhhhhHHHHhhhhhcccccccccccCCccccCCHHHHH
Confidence            3568999888778865   9975 9999999999999999999999999999988766          9      99999


Q ss_pred             HHHHHHHhhhhhh-c-------cccCCCCCCCCCCeEEEEecC------c-EEEEeeecccCCcceEEEEeCc--eEEEE
Q 012776          125 VYASSWALSIYFA-Y-------RRAWKPFNPVLGETFEMVNHG------G-VTFIAEQVSHHPPMSAGHAENE--HFIYD  187 (456)
Q Consensus       125 ~~V~af~iS~~~~-~-------~r~~KPfNPILGETfe~~~~~------g-~~fiaEQVSHHPPISAf~~e~~--~~~~~  187 (456)
                      ++|++|+||+|+. +       .+.+|||||||||||+|.+++      | ++|||||||||||||||||+|+  +|.++
T Consensus        87 ~~V~af~lS~~~~~y~~~~~~~~~~kKPfNPiLGETFe~~~~d~~~~~~g~~~~iaEQVSHHPPISA~~~e~~~~g~~~~  166 (438)
T 1zhx_A           87 LAVTKWFISTLKSQYCSRNESLGSEKKPLNPFLGELFVGKWENKEHPEFGETVLLSEQVSHHPPVTAFSIFNDKNKVKLQ  166 (438)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSSCCEEECCCTTCEEEEEECCTTCTTTCCEEEEEEEEEETTEEEEEEEEETTTTEEEE
T ss_pred             HHHHHHHHhhhhhhcccccccccccccCcCCcccceEEEEecCccCCCCCcEEEEEEeccCCCCeeEEEEEcCCCCEEEE
Confidence            9999999999864 2       578999999999999999854      5 8999999999999999999996  58999


Q ss_pred             EeeeeeeeEEee-EEEEEEeeEEEEEEcCCcEEEEEeCCCceeeeeeccceeEecCCcEEEEeCCCCCEEEEEEeeCccc
Q 012776          188 VTSKLRTKFLGN-SIDVYPVGRTRVTLKRDGVVLDLVPPPTKVHNLIFGRTWIDSPGDMVMTNLTTGDKVVLYFQPCGWF  266 (456)
Q Consensus       188 ~~~~~kskF~G~-Sv~v~~~G~~~l~l~~~ge~Y~~~~P~~~v~nii~G~~~ve~~G~~~I~~~~tg~~a~i~F~~~~~~  266 (456)
                      ++..+++||+|+ ||+|.+.|.++|+|.  ||+|+|++|+++|+|||+|++|+|++|+|+|+| +||++|+|+|+++|||
T Consensus       167 g~~~~kskF~G~~Sv~v~~~G~~~l~l~--~E~Y~~t~P~~~v~gIi~G~~~vE~~G~~~I~~-~tg~~~~l~F~~kg~f  243 (438)
T 1zhx_A          167 GYNQIKASFTKSLMLTVKQFGHTMLDIK--DESYLVTPPPLHIEGILVASPFVELEGKSYIQS-STGLLCVIEFSGRGYF  243 (438)
T ss_dssp             EEEEEEEEECTTCCEEEEEECCEEEEET--TEEEEEECCCEEEECTTTTCCEEEECSEEEEEE-TTSCEEEEEEECSSSS
T ss_pred             EEeeeEEEEcCceEEEEEcceEEEEEEC--CcEEEEecCcEEEEEEEecceeEecCCeEEEEc-CCCCEEEEEEcCCCCc
Confidence            999999999999 999999999999997  899999999999999999999999999999999 7999999999999999


Q ss_pred             cCceeEEEEEEECC------CCCceEEEeeeecceeeeeeCCCCCCcCCCCCceEEEeeccCCCCCccccceeecccCCC
Q 012776          267 GAGRYEVDGYVYDA------AEQPKILMTGKWNESMSYQPCDSEGEPLPGTELKEVWRVADAPEDDKYQYTYFTHKLNSF  340 (456)
Q Consensus       267 g~~~~~V~G~V~~~------~g~~~~~i~G~W~~~l~~~~~~~~g~~l~~~~~~~lW~~~~~p~~~~~~ft~fa~~lN~~  340 (456)
                      |++.+.|+|.|++.      +++++++|+|+|++.|++......      .+...+|++.+.|...      +  .+.  
T Consensus       244 ~g~~n~v~G~I~~~~~~~~~~~~~l~~i~G~W~~~l~i~~~~~~------~~~~~~~~~~~~~~~~------~--~v~--  307 (438)
T 1zhx_A          244 SGKKNSFKARIYKDSKDSKDKEKALYTISGQWSGSSKIIKANKK------EESRLFYDAARIPAEH------L--NVK--  307 (438)
T ss_dssp             CSSSSEEEEEEESSTTGGGCGGGCSEEEEEETTSEEEEEETTCG------GGCEEEEETTTSCCCC------C--BCC--
T ss_pred             CCCccEEEEEEEcCCcccCCCCcEEEEEEEEEcceEEEEeCCCC------ccceEEeccCCCCCcc------c--cCC--
Confidence            99999999999985      567899999999999999765321      1146799988765421      1  121  


Q ss_pred             CCCCCcCCCCCccc--chhhHHHHcCCchhhHHHHHHHHHHHHHHHHHHHhcCCCceecceeecCC
Q 012776          341 DTAPKKLLPSDSRL--RPDRYALEKGDLSKAGSEKSRLEERQRAEKRIREAKDDMFTPKWFDLSDE  404 (456)
Q Consensus       341 ~~~~~~l~PtDSR~--R~D~~aLe~Gd~~~A~~eK~~LEe~QR~~rk~R~~~~~~w~Pr~F~~~~d  404 (456)
                       + ...++|+|||+  |||++||++||++.|+++|.+|||+||++||+|+++|++|+||||++.++
T Consensus       308 -p-~e~q~ptdSR~~Wr~d~~ale~Gd~d~A~~eK~rLEe~QR~~rk~re~~g~~w~Pr~F~~~~~  371 (438)
T 1zhx_A          308 -P-LEEQHPLESRKAWYDVAGAIKLGDFNLIAKTKTELEETQRELRKEEEAKGISWQRRWFKDFDY  371 (438)
T ss_dssp             -C-GGGCCTTBHHHHTHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCSSEEEEEC
T ss_pred             -C-hhhCCCcccchhhHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccceEEECCc
Confidence             1 13568999998  89999999999999999999999999999999999999999999999876

PyMOL of 1zhx

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		456
d1zhxa1		433	d.338.1.1 (A:2-434) Oxysterol-binding protein homo	5e-87

>d1zhxa1 d.338.1.1 (A:2-434) Oxysterol-binding protein homolog 4, KES1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 433	Back information, alignment and structure


class: Alpha and beta proteins (a+b)
fold: Oxysterol-binding protein-like
superfamily: Oxysterol-binding protein-like
family: Oxysterol-binding protein
domain: Oxysterol-binding protein homolog 4, KES1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  270 bits (692), Expect = 5e-87
 Identities = 83/439 (18%), Positives = 142/439 (32%), Gaps = 65/439 (14%)

Query: 63  QEERDNYWKMMQKYIGADVQSL--VTLPVFISEPNSVLQRMAELMEYSHLLDLADECED- 119
           Q    + W    K I +    L  ++ P FI  P S+ +      E+  L        D 
Sbjct: 2   QYASSSSWTSFLKSIASFNGDLSSLSAPPFILSPISLTEFSQYWAEHPELFLEPSFINDD 61

Query: 120 ---------------PYMRLVYASSWALSIY--------FAYRRAWKPFNPVLGETFEMV 156
                             R++  + W +S           +     KP NP LGE F   
Sbjct: 62  NYKEHCLIDPEVESPELARMLAVTKWFISTLKSQYCSRNESLGSEKKPLNPFLGELFVGK 121

Query: 157 -------NHGGVTFIAEQVSHHPPMSAGHAENEHFIYDVTSKLRTK-FLGNSIDVYPVGR 208
                    G    ++EQVSHHPP++A    N+     +    + K     S+ +     
Sbjct: 122 WENKEHPEFGETVLLSEQVSHHPPVTAFSIFNDKNKVKLQGYNQIKASFTKSLMLTVKQF 181

Query: 209 TRVTLKRDGVVLDLVPPPTKVHNLIFGRTWIDSPGDMVMTNLTTGDKVVLYFQPCGWFGA 268
               L        + PPP  +  ++    +++  G   + + +TG   V+ F   G+F  
Sbjct: 182 GHTMLDIKDESYLVTPPPLHIEGILVASPFVELEGKSYIQS-STGLLCVIEFSGRGYFSG 240

Query: 269 GRYEVDGYVYDAA------EQPKILMTGKWNESMSYQPCDSEGEPLPGTELKEVWRVADA 322
            +      +Y  +      E+    ++G+W+ S      + + E       +  +  A  
Sbjct: 241 KKNSFKARIYKDSKDSKDKEKALYTISGQWSGSSKIIKANKKEES------RLFYDAARI 294

Query: 323 PEDDKYQYTYFTHKLNSFDTAPKKLLPSDSRLRPDRYALEKGDLSKAGSEKSRLEERQRA 382
           P             LN      +  L S         A++ GD +     K+ LEE QR 
Sbjct: 295 P----------AEHLNVKPLEEQHPLESRKAWYDVAGAIKLGDFNLIAKTKTELEETQRE 344

Query: 383 EKRIREAKDDMFTPKWF-DLSDEVTP----TPWGDLEVY---RYNGKYSELRATLDNSES 434
            ++  EAK   +  +WF D    VTP          + +         S   A       
Sbjct: 345 LRKEEEAKGISWQRRWFKDFDYSVTPEEGALVPEKDDTFLKLASALNLSTKNAPSGTLVG 404

Query: 435 LGEINPETTEFNPWQYEDS 453
             E   E      W+++  
Sbjct: 405 DKEDRKEDLSSIHWRFQRE 423

PyMOL of d1zhxa1

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		456
d1zhxa1		433	Oxysterol-binding protein homolog 4, KES1 {Baker's	100.0

>d1zhxa1 d.338.1.1 (A:2-434) Oxysterol-binding protein homolog 4, KES1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Oxysterol-binding protein-like
superfamily: Oxysterol-binding protein-like
family: Oxysterol-binding protein
domain: Oxysterol-binding protein homolog 4, KES1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.8e-85  Score=683.42  Aligned_cols=347  Identities=22%  Similarity=0.327  Sum_probs=286.0

Q ss_pred             cchhHHHHHHhcc---CcccCCCcccCcccccccchHHHhhhccccHHHHhhhhcCCC----------------hHHHHH
Q 012776           65 ERDNYWKMMQKYI---GADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECED----------------PYMRLV  125 (456)
Q Consensus        65 ~~~siw~~lk~~I---G~DLts~vslPv~i~EP~S~LQr~ae~~ey~~lL~~Aa~~~d----------------p~eRm~  125 (456)
                      ...|.|+.++|+|   |+||++ ||||++||||+|+|||+|++|+|++||++|+.++|                |++||+
T Consensus         4 ~~~s~w~~flk~i~s~~~DLs~-is~P~~i~eP~S~Le~~a~~~ey~~Ll~~aa~~~d~~~~~~~~~~~~~e~~p~eRm~   82 (433)
T d1zhxa1           4 ASSSSWTSFLKSIASFNGDLSS-LSAPPFILSPISLTEFSQYWAEHPELFLEPSFINDDNYKEHCLIDPEVESPELARML   82 (433)
T ss_dssp             TTSHHHHHHHHTTTTCCSCGGG-SCCCGGGEEEEEGGGGGGGGCSCHHHHHGGGGCCTTTGGGSCTTCTTCSCHHHHHHH
T ss_pred             ccccHHHHHHHHHhhcCCccce-eeeCceecccccHHHHHHHHHhhHHHHHHHhhcccccccccccccccccCCHHHHHH
Confidence            4568997776666   779986 99999999999999999999999999999997666                899999


Q ss_pred             HHHHHHhhhhhh--------ccccCCCCCCCCCCeEEEEecC-------cEEEEeeecccCCcceEEEEeCc--eEEEEE
Q 012776          126 YASSWALSIYFA--------YRRAWKPFNPVLGETFEMVNHG-------GVTFIAEQVSHHPPMSAGHAENE--HFIYDV  188 (456)
Q Consensus       126 ~V~af~iS~~~~--------~~r~~KPfNPILGETfe~~~~~-------g~~fiaEQVSHHPPISAf~~e~~--~~~~~~  188 (456)
                      +|++|+||+|+.        ..+.+|||||||||||+|.+.+       +++|||||||||||||||||+++  +|.+++
T Consensus        83 ~V~~f~lS~~~~~~~~~~~~~~~~kKPfNPiLGETfe~~~~d~~~~~~~~~~~iaEQVSHHPPIsA~~~~~~~~~~~~~g  162 (433)
T d1zhxa1          83 AVTKWFISTLKSQYCSRNESLGSEKKPLNPFLGELFVGKWENKEHPEFGETVLLSEQVSHHPPVTAFSIFNDKNKVKLQG  162 (433)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHSSCCEEECCCTTCEEEEEECCTTCTTTCCEEEEEEEEEETTEEEEEEEEETTTTEEEEE
T ss_pred             HHHHHHHHHhhhhhcccccccccccCCCCCcccceEEEEEecCCCCcCCcEEEEEeCCCCCCcceeEEEEcCCCCEEEEE
Confidence            999999999964        3578999999999999998743       58999999999999999999986  499999


Q ss_pred             eeeeeeeEEeeEEEEEEeeEEEEEEcCCcEEEEEeCCCceeeeeeccceeEecCCcEEEEeCCCCCEEEEEEeeCccccC
Q 012776          189 TSKLRTKFLGNSIDVYPVGRTRVTLKRDGVVLDLVPPPTKVHNLIFGRTWIDSPGDMVMTNLTTGDKVVLYFQPCGWFGA  268 (456)
Q Consensus       189 ~~~~kskF~G~Sv~v~~~G~~~l~l~~~ge~Y~~~~P~~~v~nii~G~~~ve~~G~~~I~~~~tg~~a~i~F~~~~~~g~  268 (456)
                      +..++++|.| ++.|.+.|..++.|..++|+|+|++|+++|+|||+|++|+|+.|+|+|+| +||++|+|+|+++||||+
T Consensus       163 ~~~~~~~f~~-s~~i~~~g~~~~~l~~~~E~Y~~~~P~~~i~gii~G~~~vE~~G~~~I~~-~tg~~a~i~f~~kg~fsg  240 (433)
T d1zhxa1         163 YNQIKASFTK-SLMLTVKQFGHTMLDIKDESYLVTPPPLHIEGILVASPFVELEGKSYIQS-STGLLCVIEFSGRGYFSG  240 (433)
T ss_dssp             EEEEEEEECT-TCCEEEEEECCEEEEETTEEEEEECCCEEEECTTTTCCEEEECSEEEEEE-TTSCEEEEEEECSSSSCS
T ss_pred             Eeeeeeeecc-eEEEEEcceEEEEEEecCcEEEEecCCEEEEEEEcCCceEEecceEEEEe-CCCCEEEEEEcCCCccCC
Confidence            9999999955 56666677777777778999999999999999999999999999999998 799999999999999999


Q ss_pred             ceeEEEEEEECCCC------CceEEEeeeecceeeeeeCCCCCCcCCCCCceEEEeeccCCCCCccccceeecccCCCCC
Q 012776          269 GRYEVDGYVYDAAE------QPKILMTGKWNESMSYQPCDSEGEPLPGTELKEVWRVADAPEDDKYQYTYFTHKLNSFDT  342 (456)
Q Consensus       269 ~~~~V~G~V~~~~g------~~~~~i~G~W~~~l~~~~~~~~g~~l~~~~~~~lW~~~~~p~~~~~~ft~fa~~lN~~~~  342 (456)
                      +.+.|+|.|++.++      +++++|.|.|++.+.+......      .+...+|+.++.|.           ..|.+.+
T Consensus       241 ~~~~v~g~I~~~~~~~~~~~~~l~~i~G~W~~~~~~~~~~~~------~~~~~~~d~~~~~~-----------~~~~~~p  303 (433)
T d1zhxa1         241 KKNSFKARIYKDSKDSKDKEKALYTISGQWSGSSKIIKANKK------EESRLFYDAARIPA-----------EHLNVKP  303 (433)
T ss_dssp             SSSEEEEEEESSTTGGGCGGGCSEEEEEETTSEEEEEETTCG------GGCEEEEETTTSCC-----------CCCBCCC
T ss_pred             CcceEEEEEEeCCCCCccccceeEEEecccCceEEEEeCCCC------CcceEEEeCCcCCc-----------ccccCCC
Confidence            99999999998765      3579999999999998765322      12356777665543           3344433


Q ss_pred             CC-CcCCCCCcccchhhHHHHcCCchhhHHHHHHHHHHHHHHHHHHHhcCCCceecceeecCCCCCCCCCCcceEEEcCc
Q 012776          343 AP-KKLLPSDSRLRPDRYALEKGDLSKAGSEKSRLEERQRAEKRIREAKDDMFTPKWFDLSDEVTPTPWGDLEVYRYNGK  421 (456)
Q Consensus       343 ~~-~~l~PtDSR~R~D~~aLe~Gd~~~A~~eK~~LEe~QR~~rk~R~~~~~~w~Pr~F~~~~d~~~~~~~~~~~~~y~g~  421 (456)
                      .. ...+|||+|+|||++||++||++.|+++|.+|||+||++||+|+++|+.|+||||++..++.+.. .+...+.=.-.
T Consensus       304 ~e~~~p~eS~~~wr~d~~ale~Gd~d~A~~eK~~LEe~QR~~Rk~re~~g~~w~Pr~F~~~~~~~~~~-~~~~~~~~~~~  382 (433)
T d1zhxa1         304 LEEQHPLESRKAWYDVAGAIKLGDFNLIAKTKTELEETQRELRKEEEAKGISWQRRWFKDFDYSVTPE-EGALVPEKDDT  382 (433)
T ss_dssp             GGGCCTTBHHHHTHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCSSEEEEECSSSCC-TTSBCCCTTCH
T ss_pred             cccCCCCCCccccHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcEeccCCCCCcc-ccccCCccchH
Confidence            21 12234555578999999999999999999999999999999999999999999999988764311 11111222334


Q ss_pred             chhccccCCCC
Q 012776          422 YSELRATLDNS  432 (456)
Q Consensus       422 Yw~~r~~~~~~  432 (456)
                      |.+.+....|+
T Consensus       383 ~~~l~~~~~~~  393 (433)
T d1zhxa1         383 FLKLASALNLS  393 (433)
T ss_dssp             HHHHHHHHTBC
T ss_pred             HHHHhhccCCc
Confidence            66666655554

PyMOL of d1zhxa1