Citrus Sinensis ID: 012844

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-----
MDSDESPSPPPQLTGVVIITLPPPNNPSLGKTITAYTLTDNSPQSQQTRHRQQQEHPLPPQLHPPQNSQFNFSLPMLFPGLPRKLFLFLAISIFALILYGSVFSYTLQDRYKSNNDDENKESFVFPLYHKFGIREVSQRDAEFKLGRFVDLDGESVVASVNDGIIRPHKSKINKKLVSSNAVAVDSSSIFPLRGNIYPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYKDSLCMEIQRNHKPGYCETCQQCDYEIEYADHSSSMGVLARDELHLTIENGSLTKPNVVFGCAYDQQGLLLNTLVKTDGILGLSRAKVSLPSQLASQGIIKNVVGHCLTTNAGGGGYMFLGHDLVPSWGMAWVPMLDSPFMELYHTEILKINYGSSPLNLGARNSQVGWALFDTGSSYTYFTKQAYSELIASVSTLIHVL
ccccccccccccEEEEEEEEcccccccccccEEEEEEEcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccHHccccccccccccccEEEEEEccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccEEEEEEEEcccccEEEEEEEcccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccEEEEEEEEEEEEEEccccccccccEEEEcEEcccccccccccccccEEccccccccHHHHcccccccccEEEEEccccccccEEEEEccccccccccEEEEcccccccccEEEEEEEEEEccEEEEccccccccccEEEEcccccccccHHHHHHHHHHHHHHHHcc
cccccccccccccEEEEEEEcccccccccccEEEEEEEcccccccccccccccccccccccccccccccEEEccHccccccHHHHHHHHHHHHHHHHHHHHHcHcHHHHHHcccccccccccEEEEEEEcccccccccccHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccEEEEEEEEccccccEEEEEEccccEEEEEcccccccccccccccccccccccccccccHHHHHcccccccccccccccEEEEEEEccccccEEEEEEEEEEEEccccEEEccEEEEEccccccccccccccccEEEEcccccccHHHHHHHccccccEEEEEEcccccccEEEEEcccccccccEEEEEEcccccccEEEEEEEEEEEccEEEEccccHccccEEEEEcccEEEcccHHHHHHHHHHHHHHHccc
mdsdespspppqltgvviitlpppnnpslgktitaytltdnspqsqqtrhrqqqehplppqlhppqnsqfnfslpmlfpglprKLFLFLAISIFALILYGSVFSYTLQDryksnnddenkesfvfplyhkfgirevsqrdaefklgrfvdldgesvvasvndgiirphkskINKKLvssnavavdsssifplrgniypdglYFTYMivgnpprpyyldmdtgsdltwiqcdapcsscakganplykprmgnilpykdslcmeiqrnhkpgycetcqqcdyeieyadhsssmgvlarDELHltiengsltkpnvvfgcaydqqgLLLNTLVKTdgilglsrakvslpsqlasqGIIKNVVGhclttnaggggymflghdlvpswgmawvpmldspfmeLYHTEILKInygssplnlgarnSQVGWALfdtgssytyFTKQAYSELIASVSTLIHVL
mdsdespspppqLTGVVIITLPPPNNPSLGKTITAYTLTDNSPQSQQTRHRQQQEHPLPPQLHPPQNSQFNFSLPMLFPGLPRKLFLFLAISIFALILYGSVFSYTLQDRYKSNNDDENKESFVFPLYHKFGIREVSQRDAEFKLgrfvdldgesvvasvndgiirphkskinkklvssnavavdsssifplrgNIYPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYKDSLCMEIQRNHKPGYCETCQQCDYEIEYADHSSSMGVLARDELHLTIENGSLTKPNVVFGCAYDQQGLLLNTLVKTDGILGLSRAKVSLPSQLASQGIIKNVVGHCLTTNAGGGGYMFLGHDLVPSWGMAWVPMLDSPFMELYHTEILKINYGSSPLNLGARNSQVGWALFDTGSSYTYFTKQAYSELIASVSTLIHVL
MDSDESPSPPPQLTGVVIITLPPPNNPSLGKTITAYTLTDNspqsqqtrhrqqqehplppqlhppqNSQFNFSLPMLFPGLPRKlflflaisifalilYGSVFSYTLQDRYKSNNDDENKESFVFPLYHKFGIREVSQRDAEFKLGRFVDLDGESVVASVNDGIIRPHKSKINKKLvssnavavdsssIFPLRGNIYPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYKDSLCMEIQRNHKPGYCETCQQCDYEIEYADHSSSMGVLARDELHLTIENGSLTKPNVVFGCAYDQQGLLLNTLVKTDGILGLSRAKVSLPSQLASQGIIKNVVGHCLTTNAGGGGYMFLGHDLVPSWGMAWVPMLDSPFMELYHTEILKINYGSSPLNLGARNSQVGWALFDTGSSYTYFTKQAYSELIASVSTLIHVL
***************VVIITL************************************************FNFSLPMLFPGLPRKLFLFLAISIFALILYGSVFSYTLQDRYK********ESFVFPLYHKFGIREVSQRDAEFKLGRFVDLDGESVVASVNDGIIRPHKSKINKKLVSSNAVAVDSSSIFPLRGNIYPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYKDSLCMEIQRNHKPGYCETCQQCDYEIEYADHSSSMGVLARDELHLTIENGSLTKPNVVFGCAYDQQGLLLNTLVKTDGILGLSRAKVSLPSQLASQGIIKNVVGHCLTTNAGGGGYMFLGHDLVPSWGMAWVPMLDSPFMELYHTEILKINYGSSPLNLGARNSQVGWALFDTGSSYTYFTKQAYSELIASVSTLIH**
**************GVVIITLPPPNNPSLGKTITAYTL****************************************PGLPRKLFLFLAISIFALILYGSVFS*****************************************************************************************GNIYPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYKDSLCME*************QQCDYEIEYADHSSSMGVLARDELHLTIENGSLTKPNVVFGCAYDQQGLLLNTLVKTDGILGLSRAKVSLPSQLASQGIIKNVVGHCLTTNAGGGGYMFLGHDLVPSWGMAWVPMLDSPFMELYHTEILKINYGSSPLNLGARNSQVGWALFDTGSSYTYFTKQAYSELIASVSTLIHVL
***********QLTGVVIITLPPPNNPSLGKTITAYTLTD*****************LPPQLHPPQNSQFNFSLPMLFPGLPRKLFLFLAISIFALILYGSVFSYTLQDRYKSNNDDENKESFVFPLYHKFGIREVSQRDAEFKLGRFVDLDGESVVASVNDGIIRPHKSKINKKLVSSNAVAVDSSSIFPLRGNIYPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYKDSLCMEIQRNHKPGYCETCQQCDYEIEYADHSSSMGVLARDELHLTIENGSLTKPNVVFGCAYDQQGLLLNTLVKTDGILGLSRAKVSLPSQLASQGIIKNVVGHCLTTNAGGGGYMFLGHDLVPSWGMAWVPMLDSPFMELYHTEILKINYGSSPLNLGARNSQVGWALFDTGSSYTYFTKQAYSELIASVSTLIHVL
********PPPQLTGVVIITLPPPNNPSLGKTITAYTLTDNS**************************QFNFSLPMLFPGLPRKLFLFLAISIFALILYGSVFSYTLQDRYKSNND**NKESFVFPLYHKFGIREVSQRDAEFKLGRFVDLDGESVVASVNDGIIRPHKSKINKKLVSSN***VDSSSIFPLRGNIYPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYKDSLCMEIQRNHKPGYCETCQQCDYEIEYADHSSSMGVLARDELHLTIENGSLTKPNVVFGCAYDQQGLLLNTLVKTDGILGLSRAKVSLPSQLASQGIIKNVVGHCLTTNAGGGGYMFLGHDLVPSWGMAWVPMLDSPFMELYHTEILKINYGSSPLNLGARNSQVGWALFDTGSSYTYFTKQAYSELIASVSTLIH**
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MDSDESPSPPPQLTGVVIITLPPPNNPSLGKTITAYTLTDNSPQSQQTRHRQQQEHPLPPQLHPPQNSQFNFSLPMLFPGLPRKLFLFLAISIFALILYGSVFSYTLQDRYKSNNDDENKESFVFPLYHKFGIREVSQRDAEFKLGRFVDLDGESVVASVNDGIIRPHKSKINKKLVSSNAVAVDSSSIFPLRGNIYPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYKDSLCMEIQRNHKPGYCETCQQCDYEIEYADHSSSMGVLARDELHLTIENGSLTKPNVVFGCAYDQQGLLLNTLVKTDGILGLSRAKVSLPSQLASQGIIKNVVGHCLTTNAGGGGYMFLGHDLVPSWGMAWVPMLDSPFMELYHTEILKINYGSSPLNLGARNSQVGWALFDTGSSYTYFTKQAYSELIASVSTLIHVL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query455 2.2.26 [Sep-21-2011]
Q0IU52 410 Aspartic proteinase Asp1 no no 0.558 0.619 0.410 1e-50
A2ZC67 410 Aspartic proteinase Asp1 N/A no 0.564 0.626 0.385 2e-44
Q9S9K4 475 Aspartic proteinase-like no no 0.549 0.526 0.336 9e-30
Q766C3437 Aspartic proteinase nepen N/A no 0.496 0.517 0.280 3e-18
Q766C2438 Aspartic proteinase nepen N/A no 0.589 0.611 0.262 7e-17
Q9LHE3470 Protein ASPARTIC PROTEASE no no 0.578 0.559 0.267 8e-17
Q9LX20 528 Aspartic proteinase-like no no 0.531 0.458 0.289 1e-16
Q3EBM5447 Probable aspartic proteas no no 0.547 0.557 0.268 1e-16
Q9LS40500 Protein ASPARTIC PROTEASE no no 0.503 0.458 0.265 8e-15
Q6XBF8437 Aspartic proteinase CDR1 no no 0.531 0.553 0.299 3e-14
>sp|Q0IU52|ASP1_ORYSJ Aspartic proteinase Asp1 OS=Oryza sativa subsp. japonica GN=ASP1 PE=2 SV=1 Back     alignment and function desciption
 Score =  201 bits (510), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 113/275 (41%), Positives = 163/275 (59%), Gaps = 21/275 (7%)

Query: 186 SSSIFPLRGNIYPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLY 245
           S+ +  L GN+YP G +F  M +G+P + Y+LD+DTGS LTW+QCDAPC++C    + LY
Sbjct: 22  SAVVLELHGNVYPIGHFFITMNIGDPAKSYFLDIDTGSTLTWLQCDAPCTNCNIVPHVLY 81

Query: 246 KPRMGNILPYKDSLCMEIQRN-HKPGYCETCQQCDYEIEYADHSSSMGVLARDELHLTIE 304
           KP    ++   DSLC ++  +  KP  C + +QCDY I+Y D SSSMGVL  D   L+  
Sbjct: 82  KPTPKKLVTCADSLCTDLYTDLGKPKRCGSQKQCDYVIQYVD-SSSMGVLVIDRFSLSAS 140

Query: 305 NGSLTKP-NVVFGCAYDQQGLLLNTLVKTDGILGLSRAKVSLPSQLASQGII-KNVVGHC 362
           NG  T P  + FGC YDQ     N  +  D ILGLSR KV+L SQL SQG+I K+V+GHC
Sbjct: 141 NG--TNPTTIAFGCGYDQGKKNRNVPIPVDSILGLSRGKVTLLSQLKSQGVITKHVLGHC 198

Query: 363 LTTNAGGGGYMFLGHDLVPSWGMAWVPMLDSPFMELYHTEILKINYGSSPLNLGARNSQV 422
           +++   GGG++F G   VP+ G+ W PM         + E    + G   L+  + +  +
Sbjct: 199 ISSK--GGGFLFFGDAQVPTSGVTWTPM---------NREHKYYSPGHGTLHFDSNSKAI 247

Query: 423 GWA----LFDTGSSYTYFTKQAYSELIASVSTLIH 453
             A    +FD+G++YTYF  Q Y   ++ V + ++
Sbjct: 248 SAAPMAVIFDSGATYTYFAAQPYQATLSVVKSTLN 282

Oryza sativa subsp. japonica (taxid: 39947)
EC: 3EC: .EC: 4EC: .EC: 2EC: 3EC: .EC: -
>sp|A2ZC67|ASP1_ORYSI Aspartic proteinase Asp1 OS=Oryza sativa subsp. indica GN=ASP1 PE=2 SV=2 Back     alignment and function description
>sp|Q9S9K4|ASPL2_ARATH Aspartic proteinase-like protein 2 OS=Arabidopsis thaliana GN=At1g65240 PE=1 SV=2 Back     alignment and function description
>sp|Q766C3|NEP1_NEPGR Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1 Back     alignment and function description
>sp|Q766C2|NEP2_NEPGR Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1 Back     alignment and function description
>sp|Q9LHE3|ASPG2_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 2 OS=Arabidopsis thaliana GN=ASPG2 PE=2 SV=1 Back     alignment and function description
>sp|Q9LX20|ASPL1_ARATH Aspartic proteinase-like protein 1 OS=Arabidopsis thaliana GN=At5g10080 PE=1 SV=1 Back     alignment and function description
>sp|Q3EBM5|ASPR1_ARATH Probable aspartic protease At2g35615 OS=Arabidopsis thaliana GN=At2g35615 PE=3 SV=1 Back     alignment and function description
>sp|Q9LS40|ASPG1_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana GN=ASPG1 PE=1 SV=1 Back     alignment and function description
>sp|Q6XBF8|CDR1_ARATH Aspartic proteinase CDR1 OS=Arabidopsis thaliana GN=CDR1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query455
255541790 583 protein with unknown function [Ricinus c 0.969 0.756 0.648 1e-165
224130234 603 predicted protein [Populus trichocarpa] 0.953 0.719 0.660 1e-162
449439393 570 PREDICTED: aspartic proteinase Asp1-like 0.958 0.764 0.546 1e-139
225455900 686 PREDICTED: aspartic proteinase Asp1-like 0.920 0.610 0.582 1e-138
356522749 1336 PREDICTED: lysine-specific histone demet 0.942 0.321 0.546 1e-134
356529585 1388 PREDICTED: lysine-specific histone demet 0.942 0.309 0.555 1e-133
297734190473 unnamed protein product [Vitis vinifera] 0.756 0.727 0.620 1e-123
297847186 578 aspartyl protease family protein [Arabid 0.949 0.747 0.517 1e-122
18402471 583 aspartyl protease [Arabidopsis thaliana] 0.949 0.740 0.504 1e-119
115448471 573 Os02g0730700 [Oryza sativa Japonica Grou 0.916 0.727 0.469 1e-102
>gi|255541790|ref|XP_002511959.1| protein with unknown function [Ricinus communis] gi|223549139|gb|EEF50628.1| protein with unknown function [Ricinus communis] Back     alignment and taxonomy information
 Score =  588 bits (1515), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 303/467 (64%), Positives = 355/467 (76%), Gaps = 26/467 (5%)

Query: 1   MDSDESPSPPPQLTGVVIITLPPPNNPSLGKTITAYTLTDNS-----PQSQQTR------ 49
           M+SD+  S       VVII+LPPPNNPSLGKTITA+TLTD+      PQS Q        
Sbjct: 1   MESDDQSSH----VKVVIISLPPPNNPSLGKTITAFTLTDDDHDATYPQSHQNHEQEPSI 56

Query: 50  ---HRQQQEHPLPPQLHPPQNSQFNFSLPMLFPGLPRKLFLFLAISIFALILYGSVFSYT 106
              HR+ Q     P L PPQN Q  FS   L+   PRKL   L IS+FA+I+Y S+FS T
Sbjct: 57  IQTHRESQLPVQSPSL-PPQNPQIQFSFSGLYFSTPRKLLFLLCISLFAVIVYRSLFSNT 115

Query: 107 LQDRYKSNND-DENKESFVFPLYHKFGIREVSQRDAEFKLGRFVDLDGESVVASVNDG-I 164
           L +   S++D DE  +SF+FPLYHKFGIRE+SQ + E K  R V    ES+VASVND  +
Sbjct: 116 LLELKVSDDDNDEKTKSFIFPLYHKFGIREISQSNLEHKSIRSVY--KESLVASVNDDDV 173

Query: 165 IRPHKSKINKKLVSSNAVAVDSSSIFPLRGNIYPDGLYFTYMIVGNPPRPYYLDMDTGSD 224
           I P++   N KL SSNA AVDSSS+FP+RGN+YPDGLYFTY++VGNPPRPYYLD+DT SD
Sbjct: 174 IVPNR---NYKLASSNAAAVDSSSVFPVRGNVYPDGLYFTYILVGNPPRPYYLDIDTASD 230

Query: 225 LTWIQCDAPCSSCAKGANPLYKPRMGNILPYKDSLCMEIQRNHKPGYCETCQQCDYEIEY 284
           LTWIQCDAPC+SCAKGAN LYKPR  NI+  KDSLC+E+ RN K GYCETCQQCDYEIEY
Sbjct: 231 LTWIQCDAPCTSCAKGANALYKPRRDNIVTPKDSLCVELHRNQKAGYCETCQQCDYEIEY 290

Query: 285 ADHSSSMGVLARDELHLTIENGSLTKPNVVFGCAYDQQGLLLNTLVKTDGILGLSRAKVS 344
           ADHSSSMGVLARDELHLT+ NGS T     FGCAYDQQGLLLNTLVKTDGILGLS+AKVS
Sbjct: 291 ADHSSSMGVLARDELHLTMANGSSTNLKFNFGCAYDQQGLLLNTLVKTDGILGLSKAKVS 350

Query: 345 LPSQLASQGIIKNVVGHCLTTNAGGGGYMFLGHDLVPSWGMAWVPMLDSPFMELYHTEIL 404
           LPSQLA++GII NVVGHCL  +  GGGYMFLG D VP WGM+WVPMLDSP ++ Y T+I+
Sbjct: 351 LPSQLANRGIINNVVGHCLANDVVGGGYMFLGDDFVPRWGMSWVPMLDSPSIDSYQTQIM 410

Query: 405 KINYGSSPLNLGARNSQVGWALFDTGSSYTYFTKQAYSELIASVSTL 451
           K+NYGS PL+LG +  +V   +FD+GSSYTYFTK+AYSEL+AS+  +
Sbjct: 411 KLNYGSGPLSLGGQERRVRRIVFDSGSSYTYFTKEAYSELVASLKQV 457

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224130234|ref|XP_002328687.1| predicted protein [Populus trichocarpa] gi|222838863|gb|EEE77214.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449439393|ref|XP_004137470.1| PREDICTED: aspartic proteinase Asp1-like [Cucumis sativus] gi|449486840|ref|XP_004157418.1| PREDICTED: aspartic proteinase Asp1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|225455900|ref|XP_002275943.1| PREDICTED: aspartic proteinase Asp1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|356522749|ref|XP_003530008.1| PREDICTED: lysine-specific histone demethylase 1 homolog 1-like [Glycine max] Back     alignment and taxonomy information
>gi|356529585|ref|XP_003533370.1| PREDICTED: lysine-specific histone demethylase 1 homolog 1-like [Glycine max] Back     alignment and taxonomy information
>gi|297734190|emb|CBI15437.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|297847186|ref|XP_002891474.1| aspartyl protease family protein [Arabidopsis lyrata subsp. lyrata] gi|297337316|gb|EFH67733.1| aspartyl protease family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|18402471|ref|NP_564539.1| aspartyl protease [Arabidopsis thaliana] gi|7770346|gb|AAF69716.1|AC016041_21 F27J15.15 [Arabidopsis thaliana] gi|13430540|gb|AAK25892.1|AF360182_1 unknown protein [Arabidopsis thaliana] gi|14532748|gb|AAK64075.1| unknown protein [Arabidopsis thaliana] gi|332194267|gb|AEE32388.1| aspartyl protease [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|115448471|ref|NP_001048015.1| Os02g0730700 [Oryza sativa Japonica Group] gi|46390468|dbj|BAD15929.1| putative nucellin-like aspartic protease [Oryza sativa Japonica Group] gi|46390864|dbj|BAD16368.1| putative nucellin-like aspartic protease [Oryza sativa Japonica Group] gi|113537546|dbj|BAF09929.1| Os02g0730700 [Oryza sativa Japonica Group] gi|215697021|dbj|BAG91015.1| unnamed protein product [Oryza sativa Japonica Group] gi|222623612|gb|EEE57744.1| hypothetical protein OsJ_08261 [Oryza sativa Japonica Group] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query455
TAIR|locus:2028466 583 AT1G49050 [Arabidopsis thalian 0.934 0.728 0.498 4.3e-109
TAIR|locus:2205861 405 AT1G44130 [Arabidopsis thalian 0.540 0.607 0.457 2.5e-58
TAIR|locus:2204725 466 AT1G77480 [Arabidopsis thalian 0.547 0.534 0.420 5.1e-51
TAIR|locus:2200365 475 AT1G65240 [Arabidopsis thalian 0.547 0.524 0.338 1.4e-30
TAIR|locus:2172661 493 AT5G22850 [Arabidopsis thalian 0.567 0.523 0.307 1.1e-29
TAIR|locus:2183617 482 AT5G36260 [Arabidopsis thalian 0.540 0.510 0.332 1.9e-29
TAIR|locus:2040545 512 AT2G36670 [Arabidopsis thalian 0.547 0.486 0.311 9.7e-29
TAIR|locus:2075512 488 AT3G02740 [Arabidopsis thalian 0.547 0.510 0.299 2.1e-27
TAIR|locus:2167776 631 AT5G43100 [Arabidopsis thalian 0.516 0.372 0.324 4.9e-26
TAIR|locus:2198753 485 AT1G05840 [Arabidopsis thalian 0.556 0.521 0.302 6.1e-26
TAIR|locus:2028466 AT1G49050 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1078 (384.5 bits), Expect = 4.3e-109, P = 4.3e-109
 Identities = 221/443 (49%), Positives = 282/443 (63%)

Query:    16 VVIITLPPPNNPSLGKTITAYTLTDNXXXXXXXXXXXXXXXXXXXXXXXXXNSQFNFSLP 75
             VVIITLPP ++PS GKTI+A+TLTD+                          S+  FS  
Sbjct:    17 VVIITLPPSDDPSQGKTISAFTLTDHDYPLEIPPEDNPNPSFQPDPLHRNQQSRLLFS-- 74

Query:    76 MLFPGLPRKXXXXXXXXXXXXXXYGSVFSYTLQ------DRYKSNNDDENKE--SFVFPL 127
              L    PR               Y SVF  ++Q      D    ++DD  +E  SFVFP+
Sbjct:    75 DLSMNSPRLVLGLLGISLLAVAFYASVFPNSVQMFRVSPDERNRDDDDNLRETASFVFPV 134

Query:   128 YHKFGIREVSQRDAEFKLGRFVDLDGESVVASVNDGIIRPHKSKINKKLXXXXXXXXXXX 187
             YHK   RE  +R  E  LG    L+ E+ V S++  ++ P   K+N  L           
Sbjct:   135 YHKLRAREFHERILEEDLG----LENENFVESMDLELVNP--VKVNDVLSTSAGSIDSST 188

Query:   188 XIFPLRGNIYPDGLYFTYMIVGNPP--RPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLY 245
              IFP+ GN+YPDGLY+T ++VG P   + Y+LD+DTGS+LTWIQCDAPC+SCAKGAN LY
Sbjct:   189 TIFPVGGNVYPDGLYYTRILVGKPEDGQYYHLDIDTGSELTWIQCDAPCTSCAKGANQLY 248

Query:   246 KPRMGNILPYKDSLCMEIQRNHKPGYCETCQQCDYEIEYADHSSSMGVLARDELHLTIEN 305
             KPR  N++   ++ C+E+QRN    +CE C QCDYEIEYADHS SMGVL +D+ HL + N
Sbjct:   249 KPRKDNLVRSSEAFCVEVQRNQLTEHCENCHQCDYEIEYADHSYSMGVLTKDKFHLKLHN 308

Query:   306 GSLTKPNVVFGCAYDQQGLLLNTLVKTDGILGLSRAKVSLPSQLASQGIIKNVVGHCLTT 365
             GSL + ++VFGC YDQQGLLLNTL+KTDGILGLSRAK+SLPSQLAS+GII NVVGHCL +
Sbjct:   309 GSLAESDIVFGCGYDQQGLLLNTLLKTDGILGLSRAKISLPSQLASRGIISNVVGHCLAS 368

Query:   366 NAGGGGYMFLGHDLVPSWGMAWVPMLDSPFMELYHTEILKINYGSSPLNLGARNSQVGWA 425
             +  G GY+F+G DLVPS GM WVPML    ++ Y  ++ K++YG   L+L   N +VG  
Sbjct:   369 DLNGEGYIFMGSDLVPSHGMTWVPMLHDSRLDAYQMQVTKMSYGQGMLSLDGENGRVGKV 428

Query:   426 LFDTGSSYTYFTKQAYSELIASV 448
             LFDTGSSYTYF  QAYS+L+ S+
Sbjct:   429 LFDTGSSYTYFPNQAYSQLVTSL 451
GO:0004190 "aspartic-type endopeptidase activity" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0006499 "N-terminal protein myristoylation" evidence=RCA
TAIR|locus:2205861 AT1G44130 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2204725 AT1G77480 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2200365 AT1G65240 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2172661 AT5G22850 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183617 AT5G36260 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2040545 AT2G36670 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2075512 AT3G02740 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2167776 AT5G43100 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2198753 AT1G05840 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.23LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
eugene3.00820068
hypothetical protein (604 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query455
cd05475273 cd05475, nucellin_like, Nucellins, plant aspartic 5e-96
cd05476265 cd05476, pepsin_A_like_plant, Chroloplast Nucleoid 1e-38
cd05472299 cd05472, cnd41_like, Chloroplast Nucleoids DNA-bin 6e-37
cd05471283 cd05471, pepsin_like, Pepsin-like aspartic proteas 8e-36
PLN03146431 PLN03146, PLN03146, aspartyl protease family prote 6e-24
cd05470109 cd05470, pepsin_retropepsin_like, Cellular and ret 4e-17
cd06096326 cd06096, Plasmepsin_5, Plasmepsins are a class of 6e-15
pfam00026316 pfam00026, Asp, Eukaryotic aspartyl protease 3e-11
cd05489 362 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibit 6e-09
cd05488320 cd05488, Proteinase_A_fungi, Fungal Proteinase A , 2e-07
cd05474295 cd05474, SAP_like, SAPs, pepsin-like proteinases s 4e-06
cd06097278 cd06097, Aspergillopepsin_like, Aspergillopepsin_l 2e-04
>gnl|CDD|133142 cd05475, nucellin_like, Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information 
 Score =  289 bits (742), Expect = 5e-96
 Identities = 116/242 (47%), Positives = 139/242 (57%), Gaps = 46/242 (19%)

Query: 200 GLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYKDSL 259
           G Y+  + +GNPP+PY+LD+DTGSDLTW+QCDAPC+ C                      
Sbjct: 1   GYYYVTINIGNPPKPYFLDIDTGSDLTWLQCDAPCTGC---------------------- 38

Query: 260 CMEIQRNHKPGYCETCQQCDYEIEYADHSSSMGVLARDELHLTIENGSLTKPNVVFGCAY 319
                            QCDYEIEYAD  SSMGVL  D   L + NGS  KP + FGC Y
Sbjct: 39  -----------------QCDYEIEYADGGSSMGVLVTDIFSLKLTNGSRAKPRIAFGCGY 81

Query: 320 DQQGLLLNTLVKTDGILGLSRAKVSLPSQLASQGIIKNVVGHCLTTNAGGGGYMFLGHDL 379
           DQQG LLN    TDGILGL R K+SLPSQLASQGIIKNV+GHCL++N  GGG++F G DL
Sbjct: 82  DQQGPLLNPPPPTDGILGLGRGKISLPSQLASQGIIKNVIGHCLSSN--GGGFLFFGDDL 139

Query: 380 VPSWGMAWVPMLDSPFMELYHTEILKINYGSSPLNLGARNSQVGWALFDTGSSYTYFTKQ 439
           VPS G+ W PM      + Y      + +   P        +    +FD+GSSYTYF  Q
Sbjct: 140 VPSSGVTWTPMRRESQKKHYSPGPASLLFNGQP-----TGGKGLEVVFDSGSSYTYFNAQ 194

Query: 440 AY 441
           AY
Sbjct: 195 AY 196

Nucellins are important regulators of nucellar cell's progressive degradation after ovule fertilization. This degradation is a characteristic of programmed cell death. Nucellins are plant aspartic proteases specifically expressed in nucellar cells during degradation. The enzyme is characterized by having two aspartic protease catalytic site motifs, the Asp-Thr-Gly-Ser in the N-terminal and Asp-Ser-Gly-Ser in the C-terminal region, and two other regions nearly identical to two regions of plant aspartic proteases. Aspartic proteases are bilobal enzymes, each lobe contributing a catalytic Asp residue, with an extended active site cleft localized between the two lobes of the molecule. One lobe may be evolved from the other through ancient gene-duplication event. Although the three-dimensional structures of the two lobes are very similar, the amino acid sequences are more divergent, except for the conserved catalytic site motif. Length = 273
>gnl|CDD|133143 cd05476, pepsin_A_like_plant, Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>gnl|CDD|133139 cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>gnl|CDD|133138 cd05471, pepsin_like, Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>gnl|CDD|178691 PLN03146, PLN03146, aspartyl protease family protein; Provisional Back     alignment and domain information
>gnl|CDD|133137 cd05470, pepsin_retropepsin_like, Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>gnl|CDD|133160 cd06096, Plasmepsin_5, Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>gnl|CDD|215663 pfam00026, Asp, Eukaryotic aspartyl protease Back     alignment and domain information
>gnl|CDD|133156 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>gnl|CDD|133155 cd05488, Proteinase_A_fungi, Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>gnl|CDD|133141 cd05474, SAP_like, SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>gnl|CDD|133161 cd06097, Aspergillopepsin_like, Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 455
PLN03146431 aspartyl protease family protein; Provisional 100.0
KOG1339398 consensus Aspartyl protease [Posttranslational mod 100.0
PTZ00165 482 aspartyl protease; Provisional 100.0
cd05478317 pepsin_A Pepsin A, aspartic protease produced in g 100.0
cd05490325 Cathepsin_D2 Cathepsin_D2, pepsin family of protei 100.0
cd05477318 gastricsin Gastricsins, asparate proteases produce 100.0
cd05488320 Proteinase_A_fungi Fungal Proteinase A , aspartic 100.0
cd05486316 Cathespin_E Cathepsin E, non-lysosomal aspartic pr 100.0
cd06096326 Plasmepsin_5 Plasmepsins are a class of aspartic p 100.0
cd06097278 Aspergillopepsin_like Aspergillopepsin_like, aspar 100.0
cd05485329 Cathepsin_D_like Cathepsin_D_like, pepsin family o 100.0
cd06098317 phytepsin Phytepsin, a plant homolog of mammalian 100.0
cd05475273 nucellin_like Nucellins, plant aspartic proteases 100.0
PTZ00147453 plasmepsin-1; Provisional 100.0
cd05472299 cnd41_like Chloroplast Nucleoids DNA-binding Prote 100.0
cd05487326 renin_like Renin stimulates production of angioten 100.0
cd05471283 pepsin_like Pepsin-like aspartic proteases, biloba 100.0
cd05473 364 beta_secretase_like Beta-secretase, aspartic-acid 100.0
PTZ00013450 plasmepsin 4 (PM4); Provisional 100.0
cd05489362 xylanase_inhibitor_I_like TAXI-I inhibits degradat 100.0
cd05476265 pepsin_A_like_plant Chroloplast Nucleoids DNA-bind 100.0
PF00026317 Asp: Eukaryotic aspartyl protease The Prosite entr 100.0
cd05474295 SAP_like SAPs, pepsin-like proteinases secreted fr 100.0
PF14543164 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 99.96
cd05470109 pepsin_retropepsin_like Cellular and retroviral pe 99.88
PF14541161 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 98.65
cd0548396 retropepsin_like_bacteria Bacterial aspartate prot 97.94
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 95.94
PF1365090 Asp_protease_2: Aspartyl protease 94.91
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 92.27
PF11925370 DUF3443: Protein of unknown function (DUF3443); In 90.65
cd0548491 retropepsin_like_LTR_2 Retropepsins_like_LTR, peps 88.99
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 82.72
PF1397572 gag-asp_proteas: gag-polyprotein putative aspartyl 82.42
PF1365090 Asp_protease_2: Aspartyl protease 81.27
>PLN03146 aspartyl protease family protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=4e-46  Score=390.57  Aligned_cols=247  Identities=30%  Similarity=0.558  Sum_probs=207.1

Q ss_pred             CCceEEEEEEEcCCCceEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCcc---ccCCCccccccccCCCCCCCcC
Q 012844          198 PDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNI---LPYKDSLCMEIQRNHKPGYCET  274 (455)
Q Consensus       198 ~~~~Y~~~I~IGTPpQ~~~v~~DTGSs~lWV~~~~~C~~C~~~~~~~ydps~Sst---v~C~~~~C~~~~~~~~~~~C~~  274 (455)
                      .+++|+++|.||||||++.|+|||||+++||+|. +|..|..+.++.|||++|+|   ++|+++.|......   ..|..
T Consensus        81 ~~~~Y~v~i~iGTPpq~~~vi~DTGS~l~Wv~C~-~C~~C~~~~~~~fdps~SST~~~~~C~s~~C~~~~~~---~~c~~  156 (431)
T PLN03146         81 NGGEYLMNISIGTPPVPILAIADTGSDLIWTQCK-PCDDCYKQVSPLFDPKKSSTYKDVSCDSSQCQALGNQ---ASCSD  156 (431)
T ss_pred             CCccEEEEEEcCCCCceEEEEECCCCCcceEcCC-CCcccccCCCCcccCCCCCCCcccCCCCcccccCCCC---CCCCC
Confidence            4679999999999999999999999999999999 99999988889999999987   89999999866532   45766


Q ss_pred             CCCceeeeecCCCCeeeeEEEEEEEEEeecCC-CccccceEEEEEEcccccccccccccceeeecCCCCCCchhHhhhcC
Q 012844          275 CQQCDYEIEYADHSSSMGVLARDELHLTIENG-SLTKPNVVFGCAYDQQGLLLNTLVKTDGILGLSRAKVSLPSQLASQG  353 (455)
Q Consensus       275 ~~~c~~~i~YgdGs~~~G~l~~Dtv~l~~~~g-~~~~~~~~FG~a~~~~g~~~~~~~~~dGILGLg~~~~S~~~qL~~~g  353 (455)
                      .+.|.|.+.|+||+.+.|.+++|+|+|+...+ ...++++.|||++...+.+.   ...+||||||++..|+++||... 
T Consensus       157 ~~~c~y~i~Ygdgs~~~G~l~~Dtltlg~~~~~~~~v~~~~FGc~~~~~g~f~---~~~~GilGLG~~~~Sl~sql~~~-  232 (431)
T PLN03146        157 ENTCTYSYSYGDGSFTKGNLAVETLTIGSTSGRPVSFPGIVFGCGHNNGGTFD---EKGSGIVGLGGGPLSLISQLGSS-  232 (431)
T ss_pred             CCCCeeEEEeCCCCceeeEEEEEEEEeccCCCCcceeCCEEEeCCCCCCCCcc---CCCceeEecCCCCccHHHHhhHh-
Confidence            66799999999998889999999999965322 24688999999998776543   25799999999999999999753 


Q ss_pred             CcceeEEEEecCC---CCCCceEEeCCcCCCCC-CceEEEccCCCCCccEEEEEeEEEECCeeeecCcccC---CCccEE
Q 012844          354 IIKNVVGHCLTTN---AGGGGYMFLGHDLVPSW-GMAWVPMLDSPFMELYHTEILKINYGSSPLNLGARNS---QVGWAL  426 (455)
Q Consensus       354 ~I~~vFS~~L~~~---~~~~G~L~fGg~~~~~g-~l~~tPl~~~~~~~~y~v~l~~Isvgg~~l~~~~~~~---~~~~aI  426 (455)
                       +.++||+||.+.   ....|.|+||+..++.+ ++.|+||+.+....+|.|.|++|+||++.+.++...+   ..+.+|
T Consensus       233 -~~~~FSycL~~~~~~~~~~g~l~fG~~~~~~~~~~~~tPl~~~~~~~~y~V~L~gIsVgg~~l~~~~~~~~~~~~g~~i  311 (431)
T PLN03146        233 -IGGKFSYCLVPLSSDSNGTSKINFGTNAIVSGSGVVSTPLVSKDPDTFYYLTLEAISVGSKKLPYTGSSKNGVEEGNII  311 (431)
T ss_pred             -hCCcEEEECCCCCCCCCCcceEEeCCccccCCCCceEcccccCCCCCeEEEeEEEEEECCEECcCCccccccCCCCcEE
Confidence             556999999752   23589999999765544 5899999854324789999999999999988755422   235899


Q ss_pred             EeccccCeeecHHHHHHHHHHHHhhhh
Q 012844          427 FDTGSSYTYFTKQAYSELIASVSTLIH  453 (455)
Q Consensus       427 iDTGTt~t~LP~~~y~~l~~~i~~~v~  453 (455)
                      |||||++++||+++|++|.++|.+++.
T Consensus       312 iDSGTt~t~Lp~~~y~~l~~~~~~~~~  338 (431)
T PLN03146        312 IDSGTTLTLLPSDFYSELESAVEEAIG  338 (431)
T ss_pred             EeCCccceecCHHHHHHHHHHHHHHhc
Confidence            999999999999999999999988763

>KOG1339 consensus Aspartyl protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PTZ00165 aspartyl protease; Provisional Back     alignment and domain information
>cd05478 pepsin_A Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>cd05490 Cathepsin_D2 Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information
>cd05477 gastricsin Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information
>cd05488 Proteinase_A_fungi Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>cd05486 Cathespin_E Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information
>cd06096 Plasmepsin_5 Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>cd06097 Aspergillopepsin_like Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>cd05485 Cathepsin_D_like Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>cd06098 phytepsin Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information
>cd05475 nucellin_like Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>PTZ00147 plasmepsin-1; Provisional Back     alignment and domain information
>cd05472 cnd41_like Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>cd05487 renin_like Renin stimulates production of angiotensin and thus affects blood pressure Back     alignment and domain information
>cd05471 pepsin_like Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>cd05473 beta_secretase_like Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease Back     alignment and domain information
>PTZ00013 plasmepsin 4 (PM4); Provisional Back     alignment and domain information
>cd05489 xylanase_inhibitor_I_like TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>cd05476 pepsin_A_like_plant Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>PF00026 Asp: Eukaryotic aspartyl protease The Prosite entry also includes Pfam:PF00077 Back     alignment and domain information
>cd05474 SAP_like SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>PF14543 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 3VLB_A 3VLA_A 3AUP_D 1T6G_A 1T6E_X 2B42_A Back     alignment and domain information
>cd05470 pepsin_retropepsin_like Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>PF14541 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 3HD8_A 1T6G_A 1T6E_X 2B42_A 3VLB_A 3VLA_A Back     alignment and domain information
>cd05483 retropepsin_like_bacteria Bacterial aspartate proteases, retropepsin-like protease family Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>PF11925 DUF3443: Protein of unknown function (DUF3443); InterPro: IPR021847 This family of proteins are functionally uncharacterised Back     alignment and domain information
>cd05484 retropepsin_like_LTR_2 Retropepsins_like_LTR, pepsin-like aspartate proteases Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>PF13975 gag-asp_proteas: gag-polyprotein putative aspartyl protease Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query455
3vla_A 413 Crystal Structure Of Edgp Length = 413 2e-05
3vlb_A 413 Crystal Structure Of Xeg-Edgp Length = 413 2e-05
3apr_E325 Binding Of A Reduced Peptide Inhibitor To The Aspar 2e-04
2ewy_A 383 Crystal Structure Of Human Bace2 In Complex With A 4e-04
>pdb|3VLA|A Chain A, Crystal Structure Of Edgp Length = 413 Back     alignment and structure 
Iteration: 1

 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/194 (23%), Positives = 75/194 (38%), Gaps = 25/194 (12%)
Query: 217 LDMDTGSDLTWIQCDAPCSSCAKGANPLYKP---RMGNILPYKDSLCMEIQRNHKPGYCE 273
           L +D G    W+ CD          +  Y+P   R           C +     +PG C 
Sbjct: 37  LVVDLGGRFLWVDCDQ------NYVSSTYRPVRCRTSQCSLSGSIACGDCFNGPRPG-CN 89
Query: 274 TCQQCDYEIEYADHSSSMGVLARDELHLTIENGS-----LTKPNVVFGCAYDQQGLLLNT 328
                 +      ++++ G +A D + +   +GS     +T P  +F CA     LL N 
Sbjct: 90  NNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCA--PTSLLQNL 147
Query: 329 LVKTDGILGLSRAKVSLPSQLASQGIIKNVVGHCLTTNAGGGGYMFLGHD--------LV 380
                G+ GL R +++LPSQ AS    K     CL+ +      +  G+D        +V
Sbjct: 148 ASGVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIV 207
Query: 381 PSWGMAWVPMLDSP 394
               + + P+L +P
Sbjct: 208 SDKTLTYTPLLTNP 221
>pdb|3VLB|A Chain A, Crystal Structure Of Xeg-Edgp Length = 413 Back     alignment and structure
>pdb|3APR|E Chain E, Binding Of A Reduced Peptide Inhibitor To The Aspartic Proteinase From Rhizopus Chinensis. Implications For A Mechanism Of Action Length = 325 Back     alignment and structure
>pdb|2EWY|A Chain A, Crystal Structure Of Human Bace2 In Complex With A Hydroxyethylenamine Transition-State Inhibitor Length = 383 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query455
3aup_A 403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 5e-52
3vla_A 413 EDGP; extracellular, inhibitor, plant protein; HET 5e-47
1t6e_X 381 Xylanase inhibitor; two beta-barrel domain structu 2e-44
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 5e-13
3lpj_A 455 Beta-secretase 1; alzheimer'S, aspartyl protease, 6e-13
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 1e-12
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 1e-12
2qp8_A 395 Beta-secretase 1; BACE1, protease, alternative spl 4e-12
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 6e-12
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 8e-12
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 2e-11
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 4e-11
2ewy_A 383 Beta-secretase 2; BACE2, aspartic protease, hydrol 6e-11
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 2e-10
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 3e-10
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 4e-10
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 5e-10
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 6e-10
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 1e-09
1qdm_A 478 Prophytepsin; aspartic proteinases, saposin-like d 2e-09
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 2e-09
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 6e-09
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 7e-09
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 1e-08
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 1e-08
1wkr_A 340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 3e-08
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 1e-07
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 2e-07
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 4e-07
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 9e-07
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 1e-06
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 6e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Length = 403 Back     alignment and structure
 Score =  179 bits (455), Expect = 5e-52
 Identities = 49/285 (17%), Positives = 88/285 (30%), Gaps = 29/285 (10%)

Query: 186 SSSIFPLRGNIYPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLY 245
           +  + P++ +    GL++  +    P     + +D   +  W+ C+    S      P  
Sbjct: 8   NLVVLPVQND-GSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCE-QQYSSKTYQAPFC 65

Query: 246 KPRMGNILPYKDSLCMEIQRNHKPGYCETCQQCDYEIEYADHSSSMGVLARDELHLTIEN 305
                +        C+      +PG C                + +G L  D L +    
Sbjct: 66  HSTQCS--RANTHQCLSCPAASRPG-CHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQ 122

Query: 306 GS-------LTKPNVVFGCAYDQQGLLLNTLVKTDGILGLSRAKVSLPSQLASQGIIKNV 358
           GS       +T P  +F CA             T G+ GL  A +SLP+QLAS   ++  
Sbjct: 123 GSTQQLGPLVTVPQFLFSCAPSFLV-QKGLPRNTQGVAGLGHAPISLPNQLASHFGLQRQ 181

Query: 359 VGHCLTTNAGGGGYMFLGHDLVP---------SWGMAWVPMLDSPFMELYHTEILKINYG 409
              CL+      G +  G                 +A+ P+  +   E Y+  +  I   
Sbjct: 182 FTTCLSRYPTSKGAIIFGDAPNNMRQFQNQDIFHDLAFTPLTITLQGE-YNVRVNSIRIN 240

Query: 410 SSPLN------LGARNSQVGWALFDTGSSYTYFTKQAYSELIASV 448
              +            S  G  +  T + +    +  Y       
Sbjct: 241 QHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVF 285
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Length = 413 Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Length = 381 Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Length = 342 Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Length = 455 Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Length = 342 Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Length = 334 Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Length = 395 Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} PDB: 3tne_A* Length = 339 Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Length = 453 Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Length = 239 Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Length = 370 Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Length = 383 Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Length = 361 Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Length = 324 Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Length = 323 Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Length = 351 Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Length = 329 Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Length = 375 Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Length = 478 Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Length = 451 Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Length = 329 Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Length = 329 Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Length = 325 Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Length = 329 Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Length = 340 Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Length = 325 Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Length = 323 Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Length = 383 Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Length = 341 Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Length = 330 Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Length = 323 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query455
3vla_A 413 EDGP; extracellular, inhibitor, plant protein; HET 100.0
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 100.0
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 100.0
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 100.0
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 100.0
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 100.0
4aa9_A320 Chymosin; hydrolase, aspartic peptidase, rennet; H 100.0
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 100.0
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 100.0
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 100.0
3aup_A 403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 100.0
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 100.0
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 100.0
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 100.0
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 100.0
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 100.0
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 100.0
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 100.0
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 100.0
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 100.0
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 100.0
1t6e_X 381 Xylanase inhibitor; two beta-barrel domain structu 100.0
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 100.0
1qdm_A 478 Prophytepsin; aspartic proteinases, saposin-like d 100.0
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 100.0
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 100.0
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 100.0
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 100.0
2ewy_A 383 Beta-secretase 2; BACE2, aspartic protease, hydrol 100.0
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 100.0
2qp8_A 395 Beta-secretase 1; BACE1, protease, alternative spl 100.0
3lpj_A 455 Beta-secretase 1; alzheimer'S, aspartyl protease, 100.0
3vf3_A 402 Beta-secretase 1; structure-based drug design, hyd 100.0
1wkr_A 340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 100.0
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 99.86
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 99.83
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Back     alignment and structure
Probab=100.00  E-value=1.5e-44  Score=375.41  Aligned_cols=252  Identities=22%  Similarity=0.329  Sum_probs=207.6

Q ss_pred             CCceeeeeccCCCCCceEEEEEEEcCCCceEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCccccCCCccccccc
Q 012844          185 DSSSIFPLRGNIYPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYKDSLCMEIQ  264 (455)
Q Consensus       185 ~s~~~~Pl~g~~~~~~~Y~~~I~IGTPpQ~~~v~~DTGSs~lWV~~~~~C~~C~~~~~~~ydps~Sstv~C~~~~C~~~~  264 (455)
                      .+.+.+||+++. .+++|+++|.||||||+|.|+|||||+++||+|. +|          |..+..+.+.|.+..|....
T Consensus         6 ~~~~~~pv~~d~-~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~-~c----------~~Sst~~~v~C~s~~C~~~~   73 (413)
T 3vla_A            6 PSALVVPVKKDA-STLQYVTTINQRTPLVSENLVVDLGGRFLWVDCD-QN----------YVSSTYRPVRCRTSQCSLSG   73 (413)
T ss_dssp             CSEEEEEEEECT-TTCCEEEEEEETTTTEEEEEEEETTCSSEEEECS-SS----------CCCTTCEECBTTSHHHHHTT
T ss_pred             CccEEEEeeecC-CCCeEEEEEEcCCCCcceEEEEeCCChhhhcccC-CC----------CCCCCcCccCCCcccccccc
Confidence            467889999884 6899999999999999999999999999999998 66          23333345999999998654


Q ss_pred             cCCCC--------CCCcCCCCceeeeec-CCCCeeeeEEEEEEEEEeecCCC-----ccccceEEEEEEccccccccccc
Q 012844          265 RNHKP--------GYCETCQQCDYEIEY-ADHSSSMGVLARDELHLTIENGS-----LTKPNVVFGCAYDQQGLLLNTLV  330 (455)
Q Consensus       265 ~~~~~--------~~C~~~~~c~~~i~Y-gdGs~~~G~l~~Dtv~l~~~~g~-----~~~~~~~FG~a~~~~g~~~~~~~  330 (455)
                      .. .+        ..|. .+.|.|.+.| +||+.+.|++++|+|+|+..+|.     ..++++.|||++.+.....  ..
T Consensus        74 ~~-~~~~c~s~~~~~c~-~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~--~~  149 (413)
T 3vla_A           74 SI-ACGDCFNGPRPGCN-NNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNL--AS  149 (413)
T ss_dssp             CC-EEECCSSCCBTTBC-SSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTS--CT
T ss_pred             cC-CCcccccCCCCCCC-CCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCc--cc
Confidence            32 11        1233 2579999999 58889999999999999866553     4678999999998632111  25


Q ss_pred             ccceeeecCCCCCCchhHhhhcCCcceeEEEEecCCCCCCceEEeCCcCC-------CCCC-ceEEEccCCCC-------
Q 012844          331 KTDGILGLSRAKVSLPSQLASQGIIKNVVGHCLTTNAGGGGYMFLGHDLV-------PSWG-MAWVPMLDSPF-------  395 (455)
Q Consensus       331 ~~dGILGLg~~~~S~~~qL~~~g~I~~vFS~~L~~~~~~~G~L~fGg~~~-------~~g~-l~~tPl~~~~~-------  395 (455)
                      ..|||||||++.+|++.||.++++|+++||+||.+....+|+|+|||++.       +.++ +.|+||+.++.       
T Consensus       150 ~~dGIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~  229 (413)
T 3vla_A          150 GVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATST  229 (413)
T ss_dssp             TCCEEEECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCC
T ss_pred             ccccccccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCCcccccccc
Confidence            68999999999999999999999889999999998656789999999863       4677 99999997632       


Q ss_pred             ----CccEEEEEeEEEECCeeeecCcccC-----CCccEEEeccccCeeecHHHHHHHHHHHHhhh
Q 012844          396 ----MELYHTEILKINYGSSPLNLGARNS-----QVGWALFDTGSSYTYFTKQAYSELIASVSTLI  452 (455)
Q Consensus       396 ----~~~y~v~l~~Isvgg~~l~~~~~~~-----~~~~aIiDTGTt~t~LP~~~y~~l~~~i~~~v  452 (455)
                          ..+|.|.|++|+||++.+.+++..+     ..+++||||||++++||+++|++|+++|.+++
T Consensus       230 ~~~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~  295 (413)
T 3vla_A          230 QGEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKES  295 (413)
T ss_dssp             TTCCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHH
T ss_pred             ccCCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHh
Confidence                2699999999999999998764332     23689999999999999999999999999876
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Back     alignment and structure
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Back     alignment and structure
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A* Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Back     alignment and structure
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ... Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 455
d1t6ex_ 381 b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Tr 6e-30
d3cmsa_323 b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos 3e-20
d2apra_325 b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus 6e-20
d2qp8a1 387 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Hum 7e-19
g1b5f.1326 b.50.1.2 (A:,B:) Plant acid proteinase, phytepsin 8e-19
g1lya.1338 b.50.1.2 (A:,B:) Cathepsin D {Human (Homo sapiens) 2e-18
d1oewa_330 b.50.1.2 (A:) Endothiapepsin {Chestnut blight fung 2e-18
d1dpja_329 b.50.1.2 (A:) Acid protease {Baker's yeast (Saccha 5e-18
d1j71a_334 b.50.1.2 (A:) Acid protease {Yeast (Candida tropic 6e-18
d1eaga_342 b.50.1.2 (A:) Acid protease {Yeast (Candida albica 2e-17
g1htr.1372 b.50.1.2 (P:,B:) Pepsin(ogen) {Human (Homo sapiens 3e-17
d1am5a_324 b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus mo 4e-17
d1qdma2337 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase 5e-17
d1izea_323 b.50.1.2 (A:) Acid protease {Fungus (Aspergillus o 2e-16
d3psga_370 b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxI 2e-16
d1bxoa_323 b.50.1.2 (A:) Acid protease {Fungus (Penicillium j 9e-16
d1mppa_357 b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840] 1e-15
d2bjua1329 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrad 7e-15
d1wkra_ 340 b.50.1.2 (A:) Acid protease {Irpex lacteus (Polypo 1e-14
d1miqa_373 b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading e 2e-14
d1smra_335 b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mu 5e-14
d1hrna_337 b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Ho 3e-12
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 381 Back     information, alignment and structure

class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Xylanase inhibitor TAXI-I
species: Wheat (Triticum aestivum) [TaxId: 4565]

 Score =  117 bits (294), Expect = 6e-30
 Identities = 47/256 (18%), Positives = 75/256 (29%), Gaps = 15/256 (5%)

Query: 197 YPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYK 256
               LY      G       L +D    L W  CD      A+   P   P       Y 
Sbjct: 11  PATSLYTIPFHDGAS-----LVLDVAGPLVWSTCD-GGQPPAE--IPCSSPTCLLANAYP 62

Query: 257 DSLCMEIQRNHKPGYCETCQQCDYEIEYADHSSSMGVLARDELHLTIENGSLTKPNVVFG 316
              C                   Y       + + G L+         +GS     V  G
Sbjct: 63  APGC---PAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVG 119

Query: 317 CAYD--QQGLLLNTLVKTDGILGLSRAKVSLPSQLASQGIIKNVVGHCLTTNAGGGGYMF 374
                    LL +    + G+ GL+ + ++LP+Q+AS   + N    CL T   G     
Sbjct: 120 VLAACAPSKLLASLPRGSTGVAGLANSGLALPAQVASAQKVANRFLLCLPTGGPGVAIFG 179

Query: 375 LGHDLVP--SWGMAWVPMLDSPFMELYHTEILKINYGSSPLNLGARNSQVGWALFDTGSS 432
            G    P  +  M + P++       ++     I  G + + +       G  +  T   
Sbjct: 180 GGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEGALATGGVMLSTRLP 239

Query: 433 YTYFTKQAYSELIASV 448
           Y       Y  L+ + 
Sbjct: 240 YVLLRPDVYRPLMDAF 255
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Length = 323 Back     information, alignment and structure
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Length = 325 Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Length = 387 Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Length = 329 Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 334 Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Length = 342 Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Length = 324 Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 337 Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Length = 323 Back     information, alignment and structure
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Length = 370 Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Length = 323 Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Length = 357 Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Length = 329 Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Length = 340 Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Length = 373 Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Length = 335 Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query455
d3psga_370 Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} 100.0
g1htr.1372 Pepsin(ogen) {Human (Homo sapiens), progastricsin 100.0
d2apra_325 Acid protease {Bread mold (Rhizopus chinensis) [Ta 100.0
d1dpja_329 Acid protease {Baker's yeast (Saccharomyces cerevi 100.0
d1oewa_330 Endothiapepsin {Chestnut blight fungus (Endothia p 100.0
d1am5a_324 Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 100.0
d1miqa_373 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d1mppa_357 Pepsin {Mucor pusillus [TaxId: 4840]} 100.0
d1j71a_334 Acid protease {Yeast (Candida tropicalis) [TaxId: 100.0
d1smra_335 Chymosin (synonym: renin) {Mouse (Mus musculus) [T 100.0
d1eaga_342 Acid protease {Yeast (Candida albicans) [TaxId: 54 100.0
d1t6ex_ 381 Xylanase inhibitor TAXI-I {Wheat (Triticum aestivu 100.0
d1hrna_337 Chymosin (synonym: renin) {Human (Homo sapiens) [T 100.0
d1izea_323 Acid protease {Fungus (Aspergillus oryzae) [TaxId: 100.0
d2qp8a1 387 beta-secretase (memapsin) {Human (Homo sapiens) [T 100.0
d2bjua1329 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d1bxoa_323 Acid protease {Fungus (Penicillium janthinellum), 100.0
d3cmsa_323 Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId 100.0
g1lya.1338 Cathepsin D {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1wkra_ 340 Acid protease {Irpex lacteus (Polyporus tulipifera 100.0
d1qdma2337 Plant acid proteinase, phytepsin {Barley (Hordeum 99.98
g1b5f.1326 Plant acid proteinase, phytepsin {Cynara carduncul 99.98
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Pepsin(ogen)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=100.00  E-value=1.1e-40  Score=337.85  Aligned_cols=229  Identities=24%  Similarity=0.395  Sum_probs=195.4

Q ss_pred             ceeeeeccCCCCCceEEEEEEEcCCCceEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCccccCCCccccccccC
Q 012844          187 SSIFPLRGNIYPDGLYFTYMIVGNPPRPYYLDMDTGSDLTWIQCDAPCSSCAKGANPLYKPRMGNILPYKDSLCMEIQRN  266 (455)
Q Consensus       187 ~~~~Pl~g~~~~~~~Y~~~I~IGTPpQ~~~v~~DTGSs~lWV~~~~~C~~C~~~~~~~ydps~Sstv~C~~~~C~~~~~~  266 (455)
                      ....||.+  +.|.+|+++|.||||||+|.|+|||||+++||+|. +|..|.+..++.|||++|+++.          . 
T Consensus        45 ~~~~~l~n--~~d~~Y~~~i~iGtP~Q~~~vi~DTGSs~~Wv~~~-~C~~~~~~~~~~yd~~~Sst~~----------~-  110 (370)
T d3psga_          45 IGDEPLEN--YLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSV-YCSSLACSDHNQFNPDDSSTFE----------A-  110 (370)
T ss_dssp             SCCCTTGG--GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSGGGTTSCCBCGGGCTTCE----------E-
T ss_pred             cccccccc--ccCCEEEEEEEEcCCCeEEEEEEeCCCCCeEEECc-cCCCcccccccccCCCcccccc----------c-
Confidence            34457775  45789999999999999999999999999999999 9999999999999999998832          1 


Q ss_pred             CCCCCCcCCCCceeeeecCCCCeeeeEEEEEEEEEeecCCCccccceEEEEEEcccccccccccccceeeecCCCC----
Q 012844          267 HKPGYCETCQQCDYEIEYADHSSSMGVLARDELHLTIENGSLTKPNVVFGCAYDQQGLLLNTLVKTDGILGLSRAK----  342 (455)
Q Consensus       267 ~~~~~C~~~~~c~~~i~YgdGs~~~G~l~~Dtv~l~~~~g~~~~~~~~FG~a~~~~g~~~~~~~~~dGILGLg~~~----  342 (455)
                               ..|.|.+.|++| .+.|.++.|++.+    ++.++.++.|||++...+.+.. ....+||+|||+..    
T Consensus       111 ---------~~~~~~~~Yg~G-s~~G~~~~d~~~~----~~~~~~~~~f~~~~~~~~~~~~-~~~~~Gi~gl~~~~~~~~  175 (370)
T d3psga_         111 ---------TSQELSITYGTG-SMTGILGYDTVQV----GGISDTNQIFGLSETEPGSFLY-YAPFDGILGLAYPSISAS  175 (370)
T ss_dssp             ---------EEEEEEEESSSC-EEEEEEEEEEEEE----TTEEEEEEEEEEECSCCCGGGG-GCSCSEEEECSCGGGCGG
T ss_pred             ---------CCCcEEEEeCCc-eEEEEEEEEEEee----eceeeeeeEEEEEeeccCceec-ccccccccccccCccccc
Confidence                     278999999999 6899999999999    5778999999999988766543 45789999999864    


Q ss_pred             --CCchhHhhhcCCc-ceeEEEEecCCCCCCceEEeCCcC--CCCCCceEEEccCCCCCccEEEEEeEEEECCeeeecCc
Q 012844          343 --VSLPSQLASQGII-KNVVGHCLTTNAGGGGYMFLGHDL--VPSWGMAWVPMLDSPFMELYHTEILKINYGSSPLNLGA  417 (455)
Q Consensus       343 --~S~~~qL~~~g~I-~~vFS~~L~~~~~~~G~L~fGg~~--~~~g~l~~tPl~~~~~~~~y~v~l~~Isvgg~~l~~~~  417 (455)
                        .+++.+|.++|+| +++||+|+.+....+|.|+|||++  ++.+++.|+|+...   .+|.+.+.++.++|+.+... 
T Consensus       176 ~~~~~~~~l~~~~~i~~~~fs~~l~~~~~~~g~l~~Gg~d~~~~~~~l~~~p~~~~---~~w~v~~~~i~v~g~~~~~~-  251 (370)
T d3psga_         176 GATPVFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVSVE---GYWQITLDSITMDGETIACS-  251 (370)
T ss_dssp             GCCCHHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECSEE---TTEEEEECEEESSSSEEECT-
T ss_pred             CCCchhhhhhhhcccccceeEEEeecCCCCCceEecCCcCchhcccceeEEeeccc---ceEEEEEeeEEeCCeEEecC-
Confidence              4578899999999 999999999877788999999995  57799999999765   59999999999999877643 


Q ss_pred             ccCCCccEEEeccccCeeecHHHHHHHHHHHHhh
Q 012844          418 RNSQVGWALFDTGSSYTYFTKQAYSELIASVSTL  451 (455)
Q Consensus       418 ~~~~~~~aIiDTGTt~t~LP~~~y~~l~~~i~~~  451 (455)
                         ....+||||||++++||+++|++|.++|.+.
T Consensus       252 ---~~~~aiiDSGTs~~~lp~~~~~~i~~~l~~~  282 (370)
T d3psga_         252 ---GGCQAIVDTGTSLLTGPTSAIANIQSDIGAS  282 (370)
T ss_dssp             ---TCEEEEECTTCCSEEEEHHHHHHHHHHTTCE
T ss_pred             ---CCccEEEecCCceEeCCHHHHHHHHHHhCCe
Confidence               2358999999999999999999999998764
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure