Citrus Sinensis ID: 012853

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-----
Protein Sequence
MGASGGKWVKALIGLKKPERDDQEKVGSKGKKWRLWRSSSGEMGSSWRSFKGINHKAAAVSEGSDSPRTDAFSAAMATVVRAPPKDFRAVRQEWAAIRIQTAFRGFLARRALRALKGVVRLQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSIEGQAVQDMMDKRRSQADILKEAEEGWCDSKGTLEDVKTKIQMRQEGAFKRERAIAYSLAQKQWTSNQNSNSRTNGSISSLKNQEFDKNSWGWSWLERWMAARPWETRLMEQSQADPSDSIPPLKSCADSLVGTRSRSSEPCPVKIRKNNVTTRISAKPPHMGQATRSSSSPSSEFRYDESSASSSICTSTTPISGNTGLASERTEESGNSRPNYMNLTESTKAKQRINQPSHRVQRQSMDEFQFLKRSAAFSNADSKSSAGSEPYSTNFSRPLYLPTRLDKSSVRPREQGSCLYD
Secondary Structure (PSIPRED)
cccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHcccccHHHHHccccccccEEEEEEcccccccccccccccccccccccccccccccccccHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHccccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHcHHHHHcccccccccccccHHccccccccccccccccccccccccccccccccccccccEcccccEEccccccccc
Coil and Loop (DISEMBL)
MGASGGKWVKALIglkkperddqekvgskgkkwrlwrsssgemgsswrsfkginhkaaavsegsdsprtDAFSAAMATvvrappkdfRAVRQEWAAIRIQTAFRGFLARRALRALKGVVRLQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSIEGQAVQDMMDKRRSQADILKEAeegwcdskgtleDVKTKIQMRQEGAFKRERAIAYSLAQKQwtsnqnsnsrtngsisslknqefdknswgWSWLERWMAArpwetrlmeqsqadpsdsipplkscadslvgtrsrssepcpvkirknnvttrisakpphmgqatrsssspssefrydessasssictsttpisgntglaserteesgnsrpnymnltestkakqrinqpshrvqrqsmDEFQFLkrsaafsnadskssagsepystnfsrplylptrldkssvrpreqgsclyd
Flexible Loop (DISEMBL)
mgasggkwvkaliglkkperddqekvgskgkkwrlwrsssgemgsswrSFKGINHKAAavsegsdsprTDAFSAAMATVVRAPPKDFRAVRQEWAAIRIQTAFRGFLARRALRALKGVvrlqalvrgrqvrkqaavTLRCMQALVRVQarvrarrvrmsiegqavqdmmdKRRSQADILKeaeegwcdskgtledvktKIQMRQEGAFKRERAIAYSLAqkqwtsnqnsnsrtngsisslknqefdknswGWSWLERWMAARPWETRLMEQSqadpsdsippLKSCADSLvgtrsrssepcpvkirknnvttrisakpphmgqatrsssspssEFRYDESsasssictsttpisgntglaserteesgnsrpnyMNLTestkakqrinqpshrvqrqSMDEFQFLKRSAAfsnadskssagsepystnfsrplylptrldkssvrpreqgsclyd
Low Complexity Region (SEG)
MGASGGKWVKALIGLKKPERDDQEKVGSKGKKWRLwrsssgemgsswrsFKGINHKAAAVSEGSDSPRTDAFSAAMATVVRAPPKDFRAVRQEWAAIRIQTafrgflarralralkgvvrlQALVRGRQVRKQAAVTLRCMQALvrvqarvrarrvrMSIEGQAVQDMMDKRRSQADILKEAEEGWCDSKGTLEDVKTKIQMRQEGAFKRERAIAYSLAQKQWTSNQNSNSRTNGSISSLKNQEFDKNSWGWSWLERWMAARPWETRLMEQSQADPSDSIPPLKSCADSLVGTRSRSSEPCPVKIRKNNVTTRISAKPPHMGQATRsssspssefrydessasssictsttpisGNTGLASERTEESGNSRPNYMNLTESTKAKQRINQPSHRVQRQSMDEFQFLKRSAAFSNADSKSSAGSEPYSTNFSRPLYLPTRLDKSSVRPREQGSCLYD
Disordered region (IsUnstruct)
*******WVKALI***************************************************************ATVVRAPPKDFRAVRQEWAAIRIQTAFRGFLARRALRALKGVVRLQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRM***************************WC**************************IAY******************************KNSWGWSWLERWMAARPWET*********************************************************************************************************************************************************************************************
Disordered Region (DISOPRED)
*GASGGKWVK********************************************************************************RQEWAAIRIQTAFRGFLARRALRALKGVV****************VTLRCMQ*************************************************************************************************************WSWLERWMAA**************************************************************************************************************************************************************************************************
Disordered Region (DISEMBL)
MGASGGKWVKALIGLKK*****************LWRSSSGEMGSSWRSFKGINHK************TDAFSAAMATVVRAPPKDFRAVRQEWAAIRIQTAFRGFLARRALRALKGVVRLQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSIEGQAVQDMMDKRRSQADILKEAEEGWCDSKGTLEDVKTKIQMRQEGAFKRERAIAYSLAQK**************SISSLKNQEFDKNSWGWSWLERWMAARPWETRLM***********PPLKSCA*************CPVKIRKNNVTTRISA********************************STTPISGN**************RPNYMNLTES***************RQSMDEFQFLKRSAA****************TNFSRPLYLPTRLD***************
Disordered Region (DISPRO)
******KWVKALIGLKKP************KKW*************************************************P*KDFRAVRQEWAAIRIQTAFRGFLARRALRALKGVVRLQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSIEGQAVQDMMDKRRSQADILK**E*GWCDSKGTLEDVKTKIQMRQEGAFKRERAIAYSLAQKQWTS***************KN****KNSWGWSWLERWMAARPWE***************************************************************************************************************************************************************************TRL**SSV***********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGASGGKWVKALIGLKKPERDDQEKVGSKGKKWRLWRSSSGEMGSSWRSFKGINHKAAAVSEGSDSPRTDAFSAAMATVVRAPPKDFRAVRQEWAAIRIQTAFRGFLARRALRALKGVVRLQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSIEGQAVQDMMDKRRSQADILKEAEEGWCDSKGTLEDVKTKIQMRQEGAFKRERAIAYSLAQKQWTSNQNSNSRTNGSISSLKNQEFDKNSWGWSWLERWMAARPWETRLMEQSQADPSDSIPPLKSCADSLVGTRSRSSEPCPVKIRKNNVTTRISAKPPHMGQATRSSSSPSSEFRYDESSASSSICTSTTPISGNTGLASERTEESGNSRPNYMNLTESTKAKQRINQPSHRVQRQSMDEFQFLKRSAAFSNADSKSSAGSEPYSTNFSRPLYLPTRLDKSSVRPREQGSCLYD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	455	2.2.26 [Sep-21-2011]
Q9SF32	454	Protein IQ-DOMAIN 1 OS=Ar	no	no	0.450	0.451	0.381	7e-33
Q8LPG9	668	Protein IQ-DOMAIN 14 OS=A	no	no	0.329	0.224	0.355	2e-22
Q8L4D8	587	Protein IQ-DOMAIN 31 OS=A	no	no	0.175	0.136	0.512	2e-15
Q9FXI5	794	Protein IQ-DOMAIN 32 OS=A	no	no	0.138	0.079	0.571	9e-13

>sp|Q9SF32|IQD1_ARATH Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana GN=IQD1 PE=1 SV=1

 Score =  142 bits (357), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 87/228 (38%), Positives = 128/228 (56%), Gaps = 23/228 (10%)

Query: 67  PRTDAFSAAMATV-VRAPPKDFRAVRQ-------------EWAAIRIQTAFRGFLARRAL 112
           P +D+ +A +A V V +PP    +V Q             E AAI IQ+ FRG LARR  
Sbjct: 68  PSSDSVTATVAHVLVDSPPSSPESVHQAIVVNRFAGKSKEEAAAILIQSTFRGHLARRES 127

Query: 113 RALKGVVRLQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSIEGQA-VQDMMDK 171
           + ++G  RL+ L+ G  V++QAA+TL+CMQ L RVQ+++R+RR+RMS E QA  + ++ K
Sbjct: 128 QVMRGQERLKLLMEGSVVQRQAAITLKCMQTLSRVQSQIRSRRIRMSEENQARHKQLLQK 187

Query: 172 RRSQADILKEAEEGWCDSKGTLEDVKTKIQMRQEGAFKRERAIAYSLAQKQWTSNQNSNS 231
              +   LK     W  S  + E V+  +  + E   +RERA+AY+   +Q   N  S S
Sbjct: 188 HAKELGGLKNG-GNWNYSNQSKEQVEAGMLHKYEATMRRERALAYAFTHQQ---NLKSFS 243

Query: 232 RTNGSISSLKNQEFDKNSWGWSWLERWMAARPWETRLMEQSQADPSDS 279
           +T   +      +    +WGWSWLERWMA RPWE+   EQ+  +  +S
Sbjct: 244 KTANPMF----MDPSNPTWGWSWLERWMAGRPWESSEKEQNTTNNDNS 287

Modulates expression of glucosinolate pathway genes. May associate with nucleic acids and regulate gene expression at the transcriptional or post-transcriptional level.
Arabidopsis thaliana (taxid: 3702)

>sp|Q8LPG9|IQD14_ARATH Protein IQ-DOMAIN 14 OS=Arabidopsis thaliana GN=IQD14 PE=1 SV=1

 Score =  107 bits (266), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 59/166 (35%), Positives = 102/166 (61%), Gaps = 16/166 (9%)

Query: 92  QEWAAIRIQTAFRGFLARRALRALKGVVRLQALVRGRQVRKQAAVTLRCMQALVRVQARV 151
           Q  +A +IQ AFRG++AR++ RALKG+VRLQ +VRG  V++Q    ++ MQ +VRVQ+++
Sbjct: 321 QHASATKIQGAFRGYMARKSFRALKGLVRLQGVVRGYSVKRQTINAMKYMQQVVRVQSQI 380

Query: 152 RARRVRMSIEGQAVQDMMDKRRSQADILKEAEEGWCDSKGTLEDVKTKIQMRQEGAFKRE 211
           ++RR++M +E QA    ++K  ++    +   + W DS  T E+  ++ Q + +   KRE
Sbjct: 381 QSRRIKM-LENQA---QVEKDEAKWAASEAGNDNWDDSVLTKEERDSRSQRKTDAIIKRE 436

Query: 212 RAIAYSLAQKQWTSNQNSNSRTNGSISSLKNQEFDKNSWGWSWLER 257
           R++AY+ ++K W          N   S+  N+ F +  W W+W++R
Sbjct: 437 RSMAYAYSRKLW---------KNSPKSTQDNRSFPQ--W-WNWVDR 470

May be involved in cooperative interactions with calmodulins or calmodulin-like proteins. May associate with nucleic acids and regulate gene expression at the transcriptional or post-transcriptional level.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8L4D8|IQD31_ARATH Protein IQ-DOMAIN 31 OS=Arabidopsis thaliana GN=IQD31 PE=1 SV=1

 Score = 84.0 bits (206), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 54/80 (67%)

Query: 86  DFRAVRQEWAAIRIQTAFRGFLARRALRALKGVVRLQALVRGRQVRKQAAVTLRCMQALV 145
           D   +++E AA  +Q AFRG+LARRA  ALKG++RLQAL+RG  VR+QA  TL  +  +V
Sbjct: 106 DAERIQREIAATSVQAAFRGYLARRAFWALKGIIRLQALIRGHLVRRQAVATLFSVMGIV 165

Query: 146 RVQARVRARRVRMSIEGQAV 165
           R+QA  R R +R S  G  V
Sbjct: 166 RLQAFARGREIRKSDIGVQV 185

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FXI5|IQD32_ARATH Protein IQ-DOMAIN 32 OS=Arabidopsis thaliana GN=IQD32 PE=1 SV=3

 Score = 75.1 bits (183), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 36/63 (57%), Positives = 44/63 (69%)

Query: 93  EWAAIRIQTAFRGFLARRALRALKGVVRLQALVRGRQVRKQAAVTLRCMQALVRVQARVR 152
           E   + IQ A RGFLARR L   K V++LQA VRG  VR QA  +LRC+QA+V++QA VR
Sbjct: 215 ESVIVVIQAAVRGFLARRELLRSKKVIKLQAAVRGHLVRSQAMGSLRCVQAIVKMQAMVR 274

Query: 153 ARR 155
           AR 
Sbjct: 275 ARH 277

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	455
225429506	449	PREDICTED: uncharacterized protein LOC10	0.982	0.995	0.787	0.0
147866673	992	hypothetical protein VITISV_003845 [Viti	0.982	0.450	0.783	0.0
255550069	452	calmodulin binding protein, putative [Ri	0.989	0.995	0.811	0.0
224088814	421	predicted protein [Populus trichocarpa]	0.914	0.988	0.775	1e-171
449447132	445	PREDICTED: uncharacterized protein LOC10	0.969	0.991	0.711	1e-156
296081641	404	unnamed protein product [Vitis vinifera]	0.859	0.967	0.76	1e-152
356506998	450	PREDICTED: protein IQ-DOMAIN 14-like [Gl	0.956	0.966	0.714	1e-148
356562169	413	PREDICTED: protein IQ-DOMAIN 14-like [Gl	0.883	0.973	0.671	1e-145
357465757	445	IQ domain-containing protein [Medicago t	0.956	0.977	0.712	1e-145
356554096	417	PREDICTED: uncharacterized protein LOC10	0.896	0.978	0.665	1e-140

>gi|225429506|ref|XP_002279054.1| PREDICTED: uncharacterized protein LOC100254187 [Vitis vinifera]

 Score =  677 bits (1747), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/457 (78%), Positives = 402/457 (87%), Gaps = 10/457 (2%)

Query: 1   MGASGGKWVKALIGLKKPERDDQEKVGSKGKKWRLWRSSSGEMGSSWRSFKGINHKAAAV 60
           MG SG KWVKALIGLKKPE+DD EKVG K KKWRLWRSSSGEMGSSWR FKG  H+A   
Sbjct: 1   MGGSG-KWVKALIGLKKPEKDDHEKVGGKSKKWRLWRSSSGEMGSSWRGFKG-GHRA--Y 56

Query: 61  SEGSDSPR--TDAFSAAMATVVRAPPKDFRAVRQEWAAIRIQTAFRGFLARRALRALKGV 118
           SEGSDS    TDAF+AA+ATVVRAPPKDFR VRQEWAAIRIQTAFRGFLARRALRALKGV
Sbjct: 57  SEGSDSSSVGTDAFTAAVATVVRAPPKDFRVVRQEWAAIRIQTAFRGFLARRALRALKGV 116

Query: 119 VRLQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSIEGQAVQDMMDKRRSQADI 178
           VRLQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMS+EGQAVQ ++D+RRSQAD+
Sbjct: 117 VRLQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSMEGQAVQKLLDERRSQADL 176

Query: 179 LKEAEEGWCDSKGTLEDVKTKIQMRQEGAFKRERAIAYSLAQKQWTSNQNSNSRTNGSIS 238
           LKEAEEGWCDSKGTL DVKTK+QMRQEGAFKRERAIAYSLAQKQW S+QN+NS+TN S+S
Sbjct: 177 LKEAEEGWCDSKGTLADVKTKLQMRQEGAFKRERAIAYSLAQKQWRSSQNANSQTNVSVS 236

Query: 239 SLKNQEFDKNSWGWSWLERWMAARPWETRLMEQSQADPSDSIPPLKSCADSLVGTRSRSS 298
           S+KN E DK+SWGWSWLERWMAA+PWE RLMEQ+  DPS++ PP K C + L GT S+SS
Sbjct: 237 SVKNHELDKSSWGWSWLERWMAAKPWENRLMEQAHTDPSETTPPFKHCMNPLSGTHSKSS 296

Query: 299 EPCPVKIRKNNVTTRISAKPPHMGQATRSSSSPSSEFRYDESSASSSICTSTTPISGNTG 358
           EP  VK+R+NNVTTRISAKPP +G  TRSSSSPSSEF+YDESSASSSICTS TP+SGNT 
Sbjct: 297 EPGSVKVRRNNVTTRISAKPPPIGLVTRSSSSPSSEFQYDESSASSSICTSATPVSGNTV 356

Query: 359 LASERTEESGNSRPNYMNLTESTKAKQRINQPSHRVQRQSMDEFQFLKRSAAFSNADSKS 418
           L S++TE+S N RP+YMNLTESTKAKQR    SHRVQRQSMDEFQFLK+S  + N D+KS
Sbjct: 357 LTSDKTEDSSNYRPSYMNLTESTKAKQR----SHRVQRQSMDEFQFLKKSGLYCNVDTKS 412

Query: 419 SAGSEPYSTNFSRPLYLPTRLDKSSVRPREQGSCLYD 455
           SAGS+P S NFS+PLYLPTR+DK+SV+ RE+ +C Y+
Sbjct: 413 SAGSDPPSVNFSKPLYLPTRMDKASVKVRERENCFYE 449

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147866673|emb|CAN83680.1| hypothetical protein VITISV_003845 [Vitis vinifera]

 Score =  673 bits (1737), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/457 (78%), Positives = 400/457 (87%), Gaps = 10/457 (2%)

Query: 1   MGASGGKWVKALIGLKKPERDDQEKVGSKGKKWRLWRSSSGEMGSSWRSFKGINHKAAAV 60
           MG SG KWVKALIGLKKPE+DD EKVG K KKWRLWRSSSGEMGSSWR FKG  H+A   
Sbjct: 544 MGGSG-KWVKALIGLKKPEKDDHEKVGGKSKKWRLWRSSSGEMGSSWRGFKG-GHRA--Y 599

Query: 61  SEGSDSPR--TDAFSAAMATVVRAPPKDFRAVRQEWAAIRIQTAFRGFLARRALRALKGV 118
           SEGSDS    TDAF+AA+ATVVRAPPK FR VRQEWAAIRIQTAFRGFLARRALRALKGV
Sbjct: 600 SEGSDSSSVGTDAFTAAVATVVRAPPKGFRVVRQEWAAIRIQTAFRGFLARRALRALKGV 659

Query: 119 VRLQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSIEGQAVQDMMDKRRSQADI 178
           VRLQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMS+EGQAVQ ++D+RRSQAD+
Sbjct: 660 VRLQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSMEGQAVQKLLDERRSQADL 719

Query: 179 LKEAEEGWCDSKGTLEDVKTKIQMRQEGAFKRERAIAYSLAQKQWTSNQNSNSRTNGSIS 238
           LKEAEEGWCDSKGTL DVKTK+QMRQEGAFKRERAIAYSLAQKQW S+QN+NS+TN S+S
Sbjct: 720 LKEAEEGWCDSKGTLADVKTKLQMRQEGAFKRERAIAYSLAQKQWRSSQNANSQTNVSVS 779

Query: 239 SLKNQEFDKNSWGWSWLERWMAARPWETRLMEQSQADPSDSIPPLKSCADSLVGTRSRSS 298
           S+KN E DK+SWGWSWLERWMAA+PWE RLMEQ+  DPS++ PP K C + L G  S+SS
Sbjct: 780 SVKNHELDKSSWGWSWLERWMAAKPWENRLMEQAHTDPSETTPPFKHCMNPLSGPHSKSS 839

Query: 299 EPCPVKIRKNNVTTRISAKPPHMGQATRSSSSPSSEFRYDESSASSSICTSTTPISGNTG 358
           EP  VK+R+NNVTTRISAKPP +G  TRSSSSPSSEF+YDESSASSSICTS TP+SGNT 
Sbjct: 840 EPGSVKVRRNNVTTRISAKPPPIGLVTRSSSSPSSEFQYDESSASSSICTSATPVSGNTV 899

Query: 359 LASERTEESGNSRPNYMNLTESTKAKQRINQPSHRVQRQSMDEFQFLKRSAAFSNADSKS 418
           L S++TE+S N RP+YMNLTESTKAKQR    SHRVQRQSMDEFQFLK+S  + N D+KS
Sbjct: 900 LTSDKTEDSSNYRPSYMNLTESTKAKQR----SHRVQRQSMDEFQFLKKSGVYCNVDTKS 955

Query: 419 SAGSEPYSTNFSRPLYLPTRLDKSSVRPREQGSCLYD 455
           SAGS+P S NFS+PLYLPTR+DK+SV+ RE+ +C Y+
Sbjct: 956 SAGSDPPSVNFSKPLYLPTRMDKASVKVRERENCFYE 992

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255550069|ref|XP_002516085.1| calmodulin binding protein, putative [Ricinus communis] gi|223544571|gb|EEF46087.1| calmodulin binding protein, putative [Ricinus communis]

 Score =  673 bits (1737), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/457 (81%), Positives = 406/457 (88%), Gaps = 7/457 (1%)

Query: 1   MGASGGKWVKALIGLKKPERDDQEKVGSKGKKWRLWRSSSGEMGSSWRSFKGINHKAAAV 60
           MGASG KWVK+LIGLKK +++D EKV  K KKW+LWRSSSG++ SSW+ FKG NH+AA+ 
Sbjct: 1   MGASG-KWVKSLIGLKKSDKEDYEKVNGKSKKWKLWRSSSGDL-SSWKGFKG-NHRAASE 57

Query: 61  SEGSDSPRTDAFSAAMATVVRAPPKDFRAVRQEWAAIRIQTAFRGFLARRALRALKGVVR 120
           + GS SP TDAFSAAMATVVRAPPKDFR VRQEWAAIRIQTAFRGFLARRALRALKGVVR
Sbjct: 58  ASGS-SPLTDAFSAAMATVVRAPPKDFRVVRQEWAAIRIQTAFRGFLARRALRALKGVVR 116

Query: 121 LQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSIEGQAVQDMMDKRRSQADILK 180
           LQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSIEGQAVQ M+D+ RS+AD+LK
Sbjct: 117 LQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSIEGQAVQKMLDEHRSKADLLK 176

Query: 181 EAEEGWCDSKGTLEDVKTKIQMRQEGAFKRERAIAYSLAQKQWTSNQNSNSRTNGSISSL 240
           +AEEGWCDSKGTLEDVKTK+QMRQEGAFKRERAIAYSLAQKQW SN +SN R+N S+SS 
Sbjct: 177 QAEEGWCDSKGTLEDVKTKLQMRQEGAFKRERAIAYSLAQKQWRSNPSSNGRSNSSLSSF 236

Query: 241 KNQEFDKNSWGWSWLERWMAARPWETRLMEQSQADPSDSIPPLKSCADSLVGTRSRSSEP 300
           KN EFDKNSWGWSWLERWMAA+PWETRLMEQSQ DPSDS PP KSCADSLV   S+SSE 
Sbjct: 237 KNHEFDKNSWGWSWLERWMAAKPWETRLMEQSQNDPSDSTPPPKSCADSLVMKHSKSSEQ 296

Query: 301 CPVKIRKNNVTTRISAKPPHMGQATRSSSSPSSEFRYDESSASSSICTSTTPISGNTGLA 360
             VK+RKNNVTTRISAKPP +G  TRSSSSPSSEFR DESSASSSICTS TPISGNTGLA
Sbjct: 297 SFVKVRKNNVTTRISAKPP-IGHVTRSSSSPSSEFRCDESSASSSICTSATPISGNTGLA 355

Query: 361 SERTEESGNSRPNYMNLTESTKAKQRI-NQPSHRVQRQSMDEFQFLKRSAAFSNADSKSS 419
           S+RTEESGNSRPNYMNLTESTKAK++I N  S+R+QRQSMDEFQFL+RSAAFSN DSKSS
Sbjct: 356 SDRTEESGNSRPNYMNLTESTKAKRKIYNHLSNRIQRQSMDEFQFLRRSAAFSNGDSKSS 415

Query: 420 AGSEPYSTNFSRPLYLPTRLDKSSVRP-REQGSCLYD 455
           AGS+P S N S+PL LPTRLDK+S++  R     LYD
Sbjct: 416 AGSDPSSVNLSKPLGLPTRLDKNSMKQFRGMDYPLYD 452

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224088814|ref|XP_002308551.1| predicted protein [Populus trichocarpa] gi|222854527|gb|EEE92074.1| predicted protein [Populus trichocarpa]

 Score =  609 bits (1570), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 331/427 (77%), Positives = 372/427 (87%), Gaps = 11/427 (2%)

Query: 1   MGASGGKWVKALIGLKKPERD-DQ-EKVGSKGKKWRLWRSSSGEMGSSWRSFKGINHKAA 58
           MGASG KWVK++IGLKK ++D DQ EKV  K KKW+LWRSSSG++GSSW+ FKG NH+AA
Sbjct: 1   MGASG-KWVKSIIGLKKSDKDQDQYEKVSGKSKKWKLWRSSSGDLGSSWKGFKG-NHRAA 58

Query: 59  AVSEGSDSPRTDAFSAAMATVVRAPPKDFRAVRQEWAAIRIQTAFRGFLARRALRALKGV 118
           + + GS SP  D F+AAMATVVRAPPKDFR VRQEWAAIRIQTAFRGFLARRALRALKGV
Sbjct: 59  SEASGS-SPLADPFTAAMATVVRAPPKDFRVVRQEWAAIRIQTAFRGFLARRALRALKGV 117

Query: 119 VRLQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSIEGQAVQDMMDKRRSQADI 178
           VRLQALVRGRQVRKQAAVTL+CMQALVRVQA VRARRVRMS+EGQAVQ+M+++RRS+AD+
Sbjct: 118 VRLQALVRGRQVRKQAAVTLKCMQALVRVQAHVRARRVRMSLEGQAVQNMLNERRSKADL 177

Query: 179 LKEAEEGWCDSKGTLEDVKTKIQMRQEGAFKRERAIAYSLAQKQWTSNQNSNSRTNGSIS 238
           LK AEEGWCD KGTLEDVK+K+QMRQEGAFKRERAIAYSLAQK    +  SN+R N S+ 
Sbjct: 178 LKHAEEGWCDRKGTLEDVKSKLQMRQEGAFKRERAIAYSLAQKV-CHHHISNTRPNNSVY 236

Query: 239 SLKNQEFDKNSWGWSWLERWMAARPWETRLMEQSQADPSDSIPPLKSCADSLVGTRSRSS 298
           S KN+EFDKNSWGWSWLERWMAA+PWETRLMEQ+  DPS + PP KSC D+   T S+S 
Sbjct: 237 SFKNEEFDKNSWGWSWLERWMAAKPWETRLMEQTHTDPSVTPPP-KSCVDA--STHSKSF 293

Query: 299 EPCPVKIRKNNVTTRISAKPPHMGQATRSSSSPSSEFRYDESSASSSICTSTTPISGNTG 358
           E   VK+RKNNVTTRISA+PP +G  TRSSSSPSSE R+DESSASSSICTSTTPISGNTG
Sbjct: 294 EQSSVKVRKNNVTTRISARPP-IGHVTRSSSSPSSEVRFDESSASSSICTSTTPISGNTG 352

Query: 359 LASERTEESGNSRPNYMNLTESTKAKQRI-NQPSHRVQRQSMDEFQFLKRSAAFSNADSK 417
           LAS++TEESGNSRPNYMNLTESTKAKQ   +   HR+QRQSMDEFQF K+SAAFSN DSK
Sbjct: 353 LASDKTEESGNSRPNYMNLTESTKAKQNTSSHLFHRIQRQSMDEFQFFKKSAAFSNGDSK 412

Query: 418 SSAGSEP 424
           SSAGS+P
Sbjct: 413 SSAGSDP 419

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449447132|ref|XP_004141323.1| PREDICTED: uncharacterized protein LOC101210019 [Cucumis sativus] gi|449524599|ref|XP_004169309.1| PREDICTED: uncharacterized LOC101210019 [Cucumis sativus]

 Score =  558 bits (1438), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 320/450 (71%), Positives = 375/450 (83%), Gaps = 9/450 (2%)

Query: 1   MGASGGKWVKALIGLKKPERDDQEKVGS-KGKKWRLWRSSSGEMGSSWRSFKGINHKAAA 59
           MG SG KW+K  IG +K +++D+EK+GS K KKW+LWRS SG++ ++W+ +KG  HKAA 
Sbjct: 1   MGGSG-KWMKVFIGQRKSDKEDKEKLGSTKTKKWKLWRSPSGDLSTAWKGYKG-GHKAA- 57

Query: 60  VSEGSDSPRT-DAFSAAMATVVRAPPKDFRAVRQEWAAIRIQTAFRGFLARRALRALKGV 118
            SEGSDSPR  D+F+AA+ATV+RAPP++FR VRQEWAAIRIQTAFRGFL+RRALRALKGV
Sbjct: 58  -SEGSDSPRAADSFTAAVATVLRAPPRNFRVVRQEWAAIRIQTAFRGFLSRRALRALKGV 116

Query: 119 VRLQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSIEGQAVQDMMDKRRSQADI 178
           VRLQALVRGR VRKQAAVTLRCMQALVRVQARVRARRVRMS+EGQAVQ +++  RS+AD+
Sbjct: 117 VRLQALVRGRLVRKQAAVTLRCMQALVRVQARVRARRVRMSVEGQAVQQLLNVHRSKADL 176

Query: 179 LKEAEEGWCDSKGTLEDVKTKIQMRQEGAFKRERAIAYSLAQKQWTSNQNSNSRTNGSIS 238
           LK+AEEGWCDSKGTLED+K+K+QMRQ+GAFKRERAIAYSL QKQ  +  NS SRTN SI 
Sbjct: 177 LKQAEEGWCDSKGTLEDIKSKLQMRQDGAFKRERAIAYSLVQKQLKAIPNSTSRTNASIY 236

Query: 239 SLKNQEFDKNSWGWSWLERWMAARPWETRLMEQSQADPSDSIPPLKSCADSLVGTRSRSS 298
           +LKN EFDKN+WGWSWLERWMAA+PWETRLMEQS+ +  D  PP KSC +S+V   S+ S
Sbjct: 237 ALKNYEFDKNNWGWSWLERWMAAKPWETRLMEQSRTESFDVTPPSKSCIESVVSKHSKGS 296

Query: 299 EPCPVKIRKNNVTTRISAKPPHMGQATRSSSSPSSEFRYDESSASSSICTSTTPISGNTG 358
           EP  VK+RKNNV+TRISAKPP  GQA RS SSPSS+F YDESSASSSICTSTTP SG+  
Sbjct: 297 EPGLVKVRKNNVSTRISAKPPSSGQA-RSCSSPSSDFWYDESSASSSICTSTTPASGHAF 355

Query: 359 LASERTEESGNSRPNYMNLTESTKAKQRIN-QPSHRVQRQSMDEFQFLKRSAAFSNADSK 417
              ERTE    SRP+YMNLTESTKAKQ+ N   SHRVQRQSMDE+QFL++SAAFSN DSK
Sbjct: 356 STIERTENGSYSRPSYMNLTESTKAKQKTNSHLSHRVQRQSMDEYQFLQKSAAFSNGDSK 415

Query: 418 SSAGSEPYSTNFSRPLYLPTRLDKSSVRPR 447
           SSAGS+     F +PL +PTR DK+  + R
Sbjct: 416 SSAGSDSSVNPF-KPLMMPTRSDKNGTKLR 444

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296081641|emb|CBI20646.3| unnamed protein product [Vitis vinifera]

 Score =  546 bits (1406), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 304/400 (76%), Positives = 341/400 (85%), Gaps = 9/400 (2%)

Query: 1   MGASGGKWVKALIGLKKPERDDQEKVGSKGKKWRLWRSSSGEMGSSWRSFKGINHKAAAV 60
           MG SG KWVKALIGLKKPE+DD EKVG K KKWRLWRSSSGEMGSSWR FKG  H+A   
Sbjct: 1   MGGSG-KWVKALIGLKKPEKDDHEKVGGKSKKWRLWRSSSGEMGSSWRGFKG-GHRA--Y 56

Query: 61  SEGSDSPR--TDAFSAAMATVVRAPPKDFRAVRQEWAAIRIQTAFRGFLARRALRALKGV 118
           SEGSDS    TDAF+AA+ATVVRAPPKDFR VRQEWAAIRIQTAFRGFLARRALRALKGV
Sbjct: 57  SEGSDSSSVGTDAFTAAVATVVRAPPKDFRVVRQEWAAIRIQTAFRGFLARRALRALKGV 116

Query: 119 VRLQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSIEGQAVQDMMDKRRSQADI 178
           VRLQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMS+EGQAVQ ++D+RRSQAD+
Sbjct: 117 VRLQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSMEGQAVQKLLDERRSQADL 176

Query: 179 LKEAEEGWCDSKGTLEDVKTKIQMRQEGAFKRERAIAYSLAQKQWTSNQNSNSRTNGSIS 238
           LKEAEEGWCDSKGTL DVKTK+QMRQEGAFKRERAIAYSLAQKQW S+QN+NS+TN S+S
Sbjct: 177 LKEAEEGWCDSKGTLADVKTKLQMRQEGAFKRERAIAYSLAQKQWRSSQNANSQTNVSVS 236

Query: 239 SLKNQEFDKNSWGWSWLERWMAARPWETRLMEQSQADPSDSIPPLKSCADSLVGTRSRSS 298
           S+KN E DK+SWGWSWLERWMAA+PWE RLMEQ+  DPS++ PP K C + L GT S+SS
Sbjct: 237 SVKNHELDKSSWGWSWLERWMAAKPWENRLMEQAHTDPSETTPPFKHCMNPLSGTHSKSS 296

Query: 299 EPCPVKIRKNNVTTRISAKPPHMGQATRSSSSPSSEFRYDESSASSSICTSTTPISGNT- 357
           EP  VK+R+NNVTTRISAKPP +G  TRSSSSPSSEF+YDESSASSSICTS TP+SGNT 
Sbjct: 297 EPGSVKVRRNNVTTRISAKPPPIGLVTRSSSSPSSEFQYDESSASSSICTSATPVSGNTK 356

Query: 358 -GL-ASERTEESGNSRPNYMNLTESTKAKQRINQPSHRVQ 395
            GL  +  T+ S  S P  +N ++      R+++ S +V+
Sbjct: 357 SGLYCNVDTKSSAGSDPPSVNFSKPLYLPTRMDKASVKVR 396

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356506998|ref|XP_003522259.1| PREDICTED: protein IQ-DOMAIN 14-like [Glycine max]

 Score =  530 bits (1364), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 330/462 (71%), Positives = 378/462 (81%), Gaps = 27/462 (5%)

Query: 1   MGASGGKWVKALIGLKKPERDDQEKVGS-KGKKWRLWRSSSGEMGSSWRSFKGINHKAAA 59
           MGASG KWVKALIGLKKP++DD  K G  K K+WRLWRSSSG+ G SW+ FKG N++AA+
Sbjct: 1   MGASG-KWVKALIGLKKPDKDDHVKEGGGKSKRWRLWRSSSGDTGGSWKGFKGGNYRAAS 59

Query: 60  VSEGSDSP------RTDAFSAAMATVVRAPPKDFRAVRQEWAAIRIQTAFRGFLARRALR 113
                 SP         AF+AA+ATVVRAPPKDFR V+QEWAAIRIQTAFR FLARRALR
Sbjct: 60  EVGSDSSPPVVAADADAAFTAAVATVVRAPPKDFRLVKQEWAAIRIQTAFRAFLARRALR 119

Query: 114 ALKGVVRLQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSIEGQAVQDMMDKRR 173
           ALKGVVR+QALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSIEGQAVQ+++++RR
Sbjct: 120 ALKGVVRIQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSIEGQAVQNLLNERR 179

Query: 174 SQADILKEAEEGWCDSKGTLEDVKTKIQMRQEGAFKRERAIAYSLAQKQWTSNQNSNSRT 233
           S+ D+LK+AEEGWCDS+GTLEDVKTKIQMRQEGAFKRERA+AYSLA KQ  S  +SNSRT
Sbjct: 180 SKLDLLKQAEEGWCDSRGTLEDVKTKIQMRQEGAFKRERAMAYSLAHKQCRSTPSSNSRT 239

Query: 234 NGSISSLKNQEFDKNSWGWSWLERWMAARPWETRLME--QSQADPSDSIPPLKSCADSLV 291
           N S SSLK+ E +K + GWSWLERWMAA+PWE+RLME  QSQA+  D  P  K   +S V
Sbjct: 240 NASFSSLKSHEMNKANGGWSWLERWMAAKPWESRLMEQSQSQAEALDKTPTPKKFVESFV 299

Query: 292 GTRSRSSEPCPVKIRKNNVTTRISAKPPHMGQATRSSSSPSSEFRYDESSASSSICTSTT 351
              S +S+PC VK++KNNVTTR+ A+PP +GQATRSSSSPSSEFRYDESSASSSICTSTT
Sbjct: 300 ---SSNSKPCTVKVKKNNVTTRVFARPPLVGQATRSSSSPSSEFRYDESSASSSICTSTT 356

Query: 352 PISGNTGLASERTEES-GN--SRPNYMNLTESTKAKQRI--NQPSHRVQR-QSMDEFQFL 405
           P+SGNT    +RTE+S GN  +RPNYMNLT+STKAKQ+   N   +R QR QSMDEFQFL
Sbjct: 357 PMSGNT---CDRTEDSNGNAVARPNYMNLTQSTKAKQKTSSNHVYNRAQRQQSMDEFQFL 413

Query: 406 KRSAAFSNADSKSSAGSEPYSTNFSRPLYLPTRLDKSSVRPR 447
           KR+A FSN DSKS+AGS+P S NFSRPL+    LDKSSV  R
Sbjct: 414 KRAAVFSNGDSKSTAGSDP-SINFSRPLH----LDKSSVMTR 450

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356562169|ref|XP_003549344.1| PREDICTED: protein IQ-DOMAIN 14-like [Glycine max]

 Score =  521 bits (1341), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 304/453 (67%), Positives = 353/453 (77%), Gaps = 51/453 (11%)

Query: 1   MGASGGKWVKALIGLKKPERDDQEKVGSKGKKWRLWRSSSGEMGSSWRSFKGINHKAAAV 60
           MGASG KWVKALIGL     +++  +G K KKWRLW+SSS           G N      
Sbjct: 1   MGASG-KWVKALIGL-----NNKSDLGGKKKKWRLWKSSSA----------GENR----- 39

Query: 61  SEGSD---SPRTDAFSAAMATVVRAPPKDFRAVRQEWAAIRIQTAFRGFLARRALRALKG 117
           S+G+D   S  +D+F+ A+ATVVRAPPKDF+ ++QEWAA +IQTAFR FLARRALRALKG
Sbjct: 40  SQGNDYASSVASDSFNFAVATVVRAPPKDFKLLKQEWAATQIQTAFRAFLARRALRALKG 99

Query: 118 VVRLQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSIEGQAVQDMMDKRRSQAD 177
           VVRLQALVRGR VRKQAAVTLRCMQALVRVQARVRARRVRMSIEGQAVQ M+++RR++A+
Sbjct: 100 VVRLQALVRGRLVRKQAAVTLRCMQALVRVQARVRARRVRMSIEGQAVQIMLNERRTKAE 159

Query: 178 ILKEAEEGWCDSKGTLEDVKTKIQMRQEGAFKRERAIAYSLAQKQWTSNQNSNSRTNGSI 237
           ++K+AEEGWCDSKG+L+DVKTK+QMRQEGAFKRERAIAYSLA KQW S   SNSR N   
Sbjct: 160 LIKQAEEGWCDSKGSLKDVKTKLQMRQEGAFKRERAIAYSLAHKQWRSTPISNSRANA-- 217

Query: 238 SSLKNQEFDKNSWGWSWLERWMAARPWETRLMEQS-QADPSDSI---PPLKSCADSLVGT 293
            +L N E DK +WGWSWLERWMAA+PWE+RLMEQ+  AD ++     PP K C DS   +
Sbjct: 218 -ALNNHEMDKANWGWSWLERWMAAKPWESRLMEQTHHADATEKTPPPPPPKKCVDS---S 273

Query: 294 RSRSSEPCPVKIRKNNVTTRISAKPPHMGQATRSSSSPSSEFRYDES-SASSSICTSTTP 352
            S++SE C +KIRKNNV+TRISA+PPH+GQATR SSSPSSEF YDES S SSSICTSTTP
Sbjct: 274 NSKTSELCNIKIRKNNVSTRISARPPHIGQATRLSSSPSSEFHYDESCSNSSSICTSTTP 333

Query: 353 ISGNTGLASERTEESGNSRPNYMNLTESTKAKQRI-NQPSHRVQR-QSMDEFQFLKRSAA 410
           I        +RTE+S NSRP+YMNLTESTKAKQ+  N   +R QR QSMDEFQFLKR+A 
Sbjct: 334 I------PCDRTEDSNNSRPSYMNLTESTKAKQKTSNHQYNRSQRQQSMDEFQFLKRTAV 387

Query: 411 FSNADSKSSAGSEPYSTNFSRPLYLPTRLDKSS 443
           FSNA       S+P STNFSRPLYLPT +DKSS
Sbjct: 388 FSNA-------SDP-STNFSRPLYLPTYMDKSS 412

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357465757|ref|XP_003603163.1| IQ domain-containing protein [Medicago truncatula] gi|355492211|gb|AES73414.1| IQ domain-containing protein [Medicago truncatula]

 Score =  520 bits (1339), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 324/455 (71%), Positives = 369/455 (81%), Gaps = 20/455 (4%)

Query: 1   MGASGGKWVKALIGLKKPERDDQE-KVGSKGKKWRLWRSSSGEMGSSWRSFKGINHKAAA 59
           MGASG KWVKALIG KKP++D+Q  K G K KKWRLWRSS G+  SSW+ FK  +HKAA 
Sbjct: 1   MGASG-KWVKALIGFKKPDKDEQHVKEGGKSKKWRLWRSSPGD-NSSWKGFKTNHHKAA- 57

Query: 60  VSEGSDSPRTDAFSAAMAT-VVRAPPKDFRAVRQEWAAIRIQTAFRGFLARRALRALKGV 118
            SEGS+SP       A    VVRA PKDFR VRQEWA IRIQT FR FLARRALRALK V
Sbjct: 58  -SEGSESPTAAEAYTAAVATVVRAQPKDFRLVRQEWAVIRIQTTFRAFLARRALRALKAV 116

Query: 119 VRLQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSIEGQAVQDMMDKRRSQADI 178
           VR+QALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMS+EGQAVQ+M+++RRS+ ++
Sbjct: 117 VRIQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSMEGQAVQNMLNERRSKLEL 176

Query: 179 LKEAEEGWCDSKGTLEDVKTKIQMRQEGAFKRERAIAYSLAQKQWTSNQNSNSRTNGSIS 238
           LKEAEEGWCDS GTL+DVK+KIQMRQEGAFKRERA+AYSLAQKQ     ++NSRTN S S
Sbjct: 177 LKEAEEGWCDSIGTLDDVKSKIQMRQEGAFKRERALAYSLAQKQCRPTSSTNSRTNTSFS 236

Query: 239 SLKNQEFDKNSWGWSWLERWMAARPWETRLMEQSQADPSDSI--PPLKSCADSLVGTRSR 296
           +L+N E ++ + GWSWLERWMAA+PWETRLMEQS A+  +    PP K  A+  V   S 
Sbjct: 237 TLRNHEMNRANGGWSWLERWMAAKPWETRLMEQSHAESLEKTPPPPPKKFAEPFV---SS 293

Query: 297 SSEPCPVKIRKNNVTTRISAK-PPHMGQATRSSSSPSSEFRYDESSASSSICTSTTPISG 355
           + +PC VK++KNNVTTRISAK PPH+GQATRSSSSPSSEFRYDESSASSSICTSTTP+SG
Sbjct: 294 NLKPCSVKVKKNNVTTRISAKPPPHIGQATRSSSSPSSEFRYDESSASSSICTSTTPMSG 353

Query: 356 NTGLASERTEESGNS-RPNYMNLTESTKAKQR--INQPSHRVQR-QSMDEFQFLKRSAAF 411
           NT    ERTE+S NS RPNYMNLT+STKAK +   NQ  +R QR QSMDEFQF+KR+A F
Sbjct: 354 NT---CERTEDSCNSTRPNYMNLTKSTKAKLKSGSNQMYNRAQRQQSMDEFQFMKRAAVF 410

Query: 412 SNADSKSSAGSEPYSTNFSRPLYLPTRLDKSSVRP 446
           SN DSKS A S+ +S NFSRPL LPT+ DKSSVRP
Sbjct: 411 SNGDSKSIAASD-HSLNFSRPLRLPTQSDKSSVRP 444

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356554096|ref|XP_003545385.1| PREDICTED: uncharacterized protein LOC100787102 [Glycine max]

 Score =  503 bits (1295), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 300/451 (66%), Positives = 353/451 (78%), Gaps = 43/451 (9%)

Query: 1   MGASGGKWVKALIGLKKPERDDQEKVGSKGKKWRLWR-SSSGEMGSSWRSFKGINHKAAA 59
           MGASG KWVKALIGL     +++  +G K KKWRLW+ SS+GE  S        ++  A+
Sbjct: 1   MGASG-KWVKALIGL-----NNKNDLGGKKKKWRLWKISSAGENRSQ-------DYDYAS 47

Query: 60  VSEGSDSPRTDAFSAAMATVVRAPPKDFRAVRQEWAAIRIQTAFRGFLARRALRALKGVV 119
           V+       +D+F+AA+ATVVRAPPKDF+ ++QEWAA RIQTAFR FLARRALRALKGVV
Sbjct: 48  VA-------SDSFNAAVATVVRAPPKDFKLLKQEWAATRIQTAFRAFLARRALRALKGVV 100

Query: 120 RLQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSIEGQAVQDMMDKRRSQADIL 179
           RLQALVRGR VRKQAAVTLRCMQALVRVQARVRARRVRMSIEGQAVQ+M+++RR++A+++
Sbjct: 101 RLQALVRGRLVRKQAAVTLRCMQALVRVQARVRARRVRMSIEGQAVQNMLNERRTKAELI 160

Query: 180 KEAEEGWCDSKGTLEDVKTKIQMRQEGAFKRERAIAYSLAQKQWTSNQNSNSRTNGSISS 239
           K+AEEGWCDSKG+LEDVKTK+QMRQEGAFKRERAIAYSLA KQW S   SNSR N   ++
Sbjct: 161 KQAEEGWCDSKGSLEDVKTKLQMRQEGAFKRERAIAYSLAHKQWRSTPISNSRAN---AT 217

Query: 240 LKNQEFDKNSWGWSWLERWMAARPWETRLMEQSQ---ADPSDSIPPLKSCADSLVGTRSR 296
           L NQ+ DK +WGWSWLERWMAA+PWE+RLMEQ+    A      PP K C DS   + S+
Sbjct: 218 LNNQDTDKANWGWSWLERWMAAKPWESRLMEQTHHANATEKTPPPPPKKCVDS---SNSK 274

Query: 297 SSEPCPVKIRKNNVTTRISAKPPHMGQATRSSSSPSSEFRYDESSASSSICTSTTPISGN 356
           +SEPC VKIRKNNV+TRISA+PP + QA   SSSPSSEF YDESS SSSICTSTTPISG+
Sbjct: 275 TSEPCNVKIRKNNVSTRISARPPLIWQANHLSSSPSSEFHYDESSNSSSICTSTTPISGS 334

Query: 357 TGLASERTEESGNSRPNYMNLTESTKAKQRINQP----SHRVQRQSMDEFQFLKRSAAFS 412
             L  +RTE++ N+RP+YMNLTESTKAKQ+ N      SHR  +QSMDEFQFLKR+A FS
Sbjct: 335 AALPCDRTEDTNNTRPSYMNLTESTKAKQKTNNHQYNRSHR--QQSMDEFQFLKRTAVFS 392

Query: 413 NADSKSSAGSEPYSTNFSRPLYLPTRLDKSS 443
           N        S+P STNF RPLYLPT +DK S
Sbjct: 393 N------GASDP-STNFCRPLYLPTYMDKRS 416

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	455
TAIR|locus:2057459	416	IQD6 "AT2G26180" [Arabidopsis	0.8	0.875	0.507	1.5e-92
TAIR|locus:2030225	414	iqd8 "AT1G72670" [Arabidopsis	0.672	0.739	0.418	2.3e-64
TAIR|locus:2018837	371	IQD7 "AT1G17480" [Arabidopsis	0.459	0.563	0.397	1.5e-41
TAIR|locus:2090409	422	IQD5 "AT3G22190" [Arabidopsis	0.562	0.606	0.342	2.8e-34
TAIR|locus:2086385	259	IQD10 "AT3G15050" [Arabidopsis	0.435	0.764	0.293	8.7e-23
TAIR|locus:2143503	461	iqd2 "AT5G03040" [Arabidopsis	0.564	0.557	0.323	1.1e-22
TAIR|locus:2055430	263	iqd9 "AT2G33990" [Arabidopsis	0.465	0.806	0.252	1.5e-20
TAIR|locus:2200945	527	IQD18 "AT1G01110" [Arabidopsis	0.432	0.373	0.309	2.1e-17
TAIR|locus:2100504	430	IQD3 "AT3G52290" [Arabidopsis	0.619	0.655	0.282	2.5e-17
TAIR|locus:2134628	534	iqd17 "AT4G00820" [Arabidopsis	0.439	0.374	0.311	2.2e-14

TAIR|locus:2057459 IQD6 "AT2G26180" [Arabidopsis thaliana (taxid:3702)]

 Score = 922 (329.6 bits), Expect = 1.5e-92, P = 1.5e-92
 Identities = 199/392 (50%), Positives = 247/392 (63%)

Query:     1 MGASGGKWVKALIGLKKPERDDQEKVGSKGKKWRLXXXXXXXXXXXXXXFKGINHKAAAV 60
             MGASG KWVK++IGLKK E+D+ EK   K KKW+L              +KG   K  + 
Sbjct:     1 MGASG-KWVKSIIGLKKLEKDEIEKGNGKNKKWKLWRTTSVDS------WKGFRGKHRSD 53

Query:    61 SEGSDSPRTDAFSAAMATVVRAPPKDFRAVRQEWAAIRIQTXXXXXXXXXXXXXXXXXXX 120
             S+G DS  +  +SAA+ATV+RAPPKDF+AVR+EWAAIRIQT                   
Sbjct:    54 SDGVDS--STVYSAAVATVLRAPPKDFKAVREEWAAIRIQTAFRGFLARRALRALKGIVR 111

Query:   121 XQALVRGRQVRKQAAVTLRCMQALXXXXXXXXXXXXXMSIEGQAVQDMMDKRRSQADILK 180
              QALVRGRQVRKQAAVTLRCMQAL             M++EGQAVQ ++D+ R+++D+LK
Sbjct:   112 LQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMTVEGQAVQKLLDEHRTKSDLLK 171

Query:   181 EAEEGWCDSKGTLEDVKTKIQMRQEGAFKRERAIAYSLAQKQWTSNQNSNSRTNGSISSL 240
             E EEGWCD KGT++D+K+K+Q RQEGAFKRERA+AY+LAQKQW S  +SN +TN SIS L
Sbjct:   172 EVEEGWCDRKGTVDDIKSKLQQRQEGAFKRERALAYALAQKQWRSTTSSNLKTNSSISYL 231

Query:   241 KNQEFDKNSWGWSWLERWMAARPWETRLMEQSQADPSDSIPPLKSCADSLVGTRSRSSEP 300
             K+QEFDKNSWGWSWLERWMAARPWETRLM+    D + + PPL            +S E 
Sbjct:   232 KSQEFDKNSWGWSWLERWMAARPWETRLMDT--VDTAATPPPLPH-------KHLKSPET 282

Query:   301 CPV-KIRKNNVTTRISAKPP-HMGQATRXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNTG 358
               V ++R+NNVTTR+SAKPP HM                                 G TG
Sbjct:   283 ADVVQVRRNNVTTRVSAKPPPHM-------LSSSPGYEFNESSGSSSICTSTTPVSGKTG 335

Query:   359 LASERTEESGNS-RPNYMNLTESTKAKQRINQ 389
             L S+ +       +P+YM+LTESTKAK+R N+
Sbjct:   336 LVSDNSSSQAKKHKPSYMSLTESTKAKRRTNR 367

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2030225 iqd8 "AT1G72670" [Arabidopsis thaliana (taxid:3702)]

 Score = 581 (209.6 bits), Expect = 2.3e-64, Sum P(2) = 2.3e-64
 Identities = 137/327 (41%), Positives = 182/327 (55%)

Query:     1 MGASGGKWVKALIGLKKPERDDQEKVGSKGKKWRLXXXXXXXXXXXXXXFKGINHKAAAV 60
             MG SG  W+K+LI  KK   DDQEK   K KKW+L              FK         
Sbjct:     1 MGGSGN-WIKSLITNKKNITDDQEK-NIK-KKWKLWRTSSEGLISSSKGFKSRGGSYGTP 57

Query:    61 SEGSDSPR---TDAFSAAMATVVRAPPKDFRAVRQEWAAIRIQTXXXXXXXXXXXXXXXX 117
             S GSD P     D+F+AA+A V+RAPPKDF  V++EWAA RIQ                 
Sbjct:    58 SLGSDPPSFSADDSFTAAVAAVIRAPPKDFFLVKREWAATRIQAAFRAFLARQALRALKA 117

Query:   118 XXXXQALVRGRQVRKQAAVTLRCMQALXXXXXXXXXXXXXMSIEGQAVQDMMDKRRSQAD 177
                 QA+ RGRQVRKQA VTLRCMQAL                +GQ ++   D+++   D
Sbjct:   118 VVRIQAIFRGRQVRKQADVTLRCMQALVRVQARVRAHCNRGPSDGQELEKPSDQQKD--D 175

Query:   178 ILKEAEEGWCDSKGTLEDVKTKIQMRQEGAFKRERAIAYSLAQKQWTSNQNSNSRTNGSI 237
               K+AE+GWCDS G++ +V+TK+QMRQEGA KRERA+ Y+L  +  T    + +   GS+
Sbjct:   176 PAKQAEKGWCDSPGSINEVRTKLQMRQEGAIKRERAMVYALTHQPRTCPSPAKASKQGSV 235

Query:   238 SSLKNQEFDKNSWGWSWLERWMAARPWETRLMEQSQADPSDSIPPLKSCADSLVGTRSRS 297
                KN    K+S GW+WL+RW+A RPWE RLME     P++S       +++   + S  
Sbjct:   236 K--KNNGSCKSSPGWNWLDRWVADRPWEGRLME----GPTNS-------SENARKSESSV 282

Query:   298 SEPCPVKIRKNNVTTRISAKPPHMGQA 324
             SE   V++RKNN+TTR+ A+PP M  +
Sbjct:   283 SEHDTVQVRKNNLTTRVLARPPPMSSS 309

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0000226 "microtubule cytoskeleton organization" evidence=RCA

GO:0000911 "cytokinesis by cell plate formation" evidence=RCA

TAIR|locus:2018837 IQD7 "AT1G17480" [Arabidopsis thaliana (taxid:3702)]

 Score = 385 (140.6 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
 Identities = 91/229 (39%), Positives = 125/229 (54%)

Query:     1 MGASGGKWVKALIGLKKPERDDQEKVGSKG--KKWRLXXXXXXXXXXXXXXFKGINHKAA 58
             MG SG  W+++LI  +KP  D QEK+  K   KKW+L               +G     A
Sbjct:     1 MGGSGN-WIRSLISNRKPVNDQQEKLSDKSSKKKWKLWRISSESLASSSFKSRG---SYA 56

Query:    59 AVSEGSDSPR---TDAFSAAMATVVRAPPKDFRAVRQEWAAIRIQTXXXXXXXXXXXXXX 115
             A S GS+ P     +AF+ AMA ++RAPP+DF  V++EWA+ RIQ               
Sbjct:    57 ASSLGSELPSFSADEAFTTAMAALIRAPPRDFLMVKREWASTRIQAAFRAFLARQAFRAL 116

Query:   116 XXXXXXQALVRGRQVRKQAAVTLRCMQALXXXXXXXXXXXXXMSIEGQAVQDMMDKRRSQ 175
                   QA+ RGRQVRKQAAVTLRCMQAL             +    +A  D ++ +   
Sbjct:   117 KAVVRIQAIFRGRQVRKQAAVTLRCMQALVRVQSR-------VRAHRRAPSDSLELK--- 166

Query:   176 ADILKEAEEGWCDSKGTLEDVKTKIQMRQEGAFKRERAIAYSLAQKQWT 224
              D +K+ E+GWC S  ++++VKTK+QM+QEGA KRERA+ Y+L  +  T
Sbjct:   167 -DPVKQTEKGWCGSPRSIKEVKTKLQMKQEGAIKRERAMVYALTHQSRT 214

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2090409 IQD5 "AT3G22190" [Arabidopsis thaliana (taxid:3702)]

 Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
 Identities = 97/283 (34%), Positives = 139/283 (49%)

Query:     1 MGASGGKWVKALIGLKKPER------DDQEKVGSKGKKWRLXXXXXXXXXXXXXXFKGIN 54
             MGASG +W+KAL+G  K ++      D+  KV +K +  R               F+  N
Sbjct:     1 MGASG-RWIKALVGFTKSDKSRSSKKDENVKVATKSRFGR-KNSVDFDFEKFQDGFEDSN 58

Query:    55 HKAAAVSEGSDSPRTDAFSAAMATVVRAPPKDFRAVRQEWAAIRIQTXXXXXXXXXXXXX 114
              ++   +  S S    ++             D ++ R+  AA RIQT             
Sbjct:    59 TRSMVDTGVSTSTSLQSYGGVAY--------DEQS-RENRAATRIQTAYRGFLARRALRA 109

Query:   115 XXXXXXXQALVRGRQVRKQAAVTLRCMQALXXXXXXXXXXXXXMSIE--GQAVQDMMDKR 172
                    QALVRG  VRKQAAVTLRCMQAL             +++E   +  Q  + ++
Sbjct:   110 LKGLVRLQALVRGHAVRKQAAVTLRCMQALVRVQARVRARRVRLALELESETSQQTLQQQ 169

Query:   173 RSQADILKEAEEGWCDSKGTLEDVKTKIQMRQEGAFKRERAIAYSLAQKQWTSNQNSNSR 232
              +    ++E EEGWCDS G++E ++ K+  RQE A KRERA+AY+L   QW +     S 
Sbjct:   170 LADEARVREIEEGWCDSIGSVEQIQAKLLKRQEAAAKRERAMAYALTH-QWQAGTRLLSA 228

Query:   233 TNGSISSLKNQEFDKNSWGWSWLERWMAARPWETRLMEQSQAD 275
              +G        + DKN+WGW+WLERWMA RPWE R ++ +  D
Sbjct:   229 HSGF-------QPDKNNWGWNWLERWMAVRPWENRFLDSNLRD 264

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2086385 IQD10 "AT3G15050" [Arabidopsis thaliana (taxid:3702)]

 Score = 229 (85.7 bits), Expect = 8.7e-23, Sum P(2) = 8.7e-23
 Identities = 61/208 (29%), Positives = 91/208 (43%)

Query:    93 EWAAIRIQTXXXXXXXXXXXXXXXXXXXXQALVRGRQVRKQAAVTLRCMQALXXXXXXXX 152
             E A IRIQ                      +L++G  V  Q +  L  + +         
Sbjct:    50 EVAVIRIQKAFRAFKARKRLCSLKSARRFNSLIQGHTVMNQTSTALNVIHSWYDIQNQIR 109

Query:   153 XXXXXMSIEGQAVQDMMDKRRSQADILKEAEEGWCDSKGTLEDVKTKIQMRQEGAFKRER 212
                  M  +G+     ++ R      L E E  WC    T+E++  KIQ ++E   KRER
Sbjct:   110 ARRLYMVTQGRLQHKRLENRLKLEIKLHELEVEWCGGSETMEEILAKIQQKEEATVKRER 169

Query:   213 AIAYSLAQKQWTSNQNSNSRTNGSISSLKNQEFDKNSWGWSWLERWMAARPWETRLMEQS 272
             A+AY+ +  QW +N    ++  G  S        K SWGWSW ERW+AARPWE R     
Sbjct:   170 AMAYAFSH-QWRANA---TQYLGQASF----NLGKESWGWSWKERWIAARPWEIRAQCYV 221

Query:   273 QADPSDSIPPLKSCADSLVGTRSRSSEP 300
                   S  P KS  ++++ T++ S++P
Sbjct:   222 VKPIKPSKKPEKSSPNNVI-TKT-SAKP 247

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2143503 iqd2 "AT5G03040" [Arabidopsis thaliana (taxid:3702)]

 Score = 263 (97.6 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
 Identities = 92/284 (32%), Positives = 129/284 (45%)

Query:    57 AAAVS-EGSDSPRTDAFSAAMATVVRAPPKDFRAV-RQEWAAIRIQTXXXXXXXXXXXXX 114
             A AV+   +D P   + S+A   V RA P  F     +E AAI IQT             
Sbjct:    78 ADAVNVTATDVPVVPS-SSAPGVVRRATPTRFAGKSNEEAAAILIQTIFRGYLARRALRA 136

Query:   115 XXXXXXXQALVRGRQVRKQAAVTLRCMQALXXXXXXXXXXXXXMSIEGQAVQ-DMMDKRR 173
                    + L+ G  V++QAA TL+CMQ L             MS E QA Q  ++ K  
Sbjct:   137 MRGLVRLKLLMEGSVVKRQAANTLKCMQTLSRVQSQIRARRIRMSEENQARQKQLLQKHA 196

Query:   174 SQADILKEAEEGWCDSKGTLEDVKTKIQMRQEGAFKRERAIAYSLAQKQ-WTSNQNSNSR 232
              +   LK  +  W DS  + E V+  +  + E   +RERA+AYS + +Q W +N  S   
Sbjct:   197 KELAGLKNGDN-WNDSIQSKEKVEANLLSKYEATMRRERALAYSYSHQQNWKNNSKSG-- 253

Query:   233 TNGSISSLKNQEFDKNSWGWSWLERWMAARPWETRLMEQSQADPSDSIPPLKS------C 286
              N       N      +WGWSWLERWMA RP E+   EQS ++ +D+   +K        
Sbjct:   254 -NPMFMDPSNP-----TWGWSWLERWMAGRPLESSEKEQSNSN-NDNAASVKGSINRNEA 306

Query:   287 ADSLVGTRSRSSEP-CPVKIR--KNNVTTRISAKPP-HMGQATR 326
             A SL  TR+ S++P  P   R    N  +  S   P  + Q++R
Sbjct:   307 AKSL--TRNGSTQPNTPSSARGTPRNKNSFFSPPTPSRLNQSSR 348

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0006007 "glucose catabolic process" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

TAIR|locus:2055430 iqd9 "AT2G33990" [Arabidopsis thaliana (taxid:3702)]

 Score = 220 (82.5 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
 Identities = 57/226 (25%), Positives = 96/226 (42%)

Query:    62 EGSDSPRTDAFSAAMATVVRAPPKDFRAVRQEWAAIRIQTXXXXXXXXXXXXXXXXXXXX 121
             +G++  +T A      +  +      R+  ++WAA RIQT                    
Sbjct:    18 QGTEKKKTSAVKPKKGSKKKGTSLVTRS--EDWAATRIQTAFKAYKARKSLRRLKGIARA 75

Query:   122 QALVRGRQVRKQAAVTLRCMQALXXXXXXXXXXXXXMSIEGQAVQDMMDKRRSQADILKE 181
             +     + V+ QA VTLR + +              M  E +     ++ ++     L +
Sbjct:    76 KLSTEKQSVKNQAVVTLRYLHSWSKIQSEIKARRVCMVTEWRLKNKRLEHQQKLEAKLHD 135

Query:   182 AEEGWCDSKGTLEDVKTKIQMRQEGAFKRERAIAYSLAQKQWTSNQNSNSRTNGSISSLK 241
              E  W     T +++  +I  R+E   KRERA+AY+ +  QW        + +G    L 
Sbjct:   136 VEVEWNGGSETKDEILERILQREEATIKRERALAYAFSH-QW--------KADGKTQWLG 186

Query:   242 NQEFDKNSWGWSWLERWMAARPWETRLM---EQSQADPSDSIPPLK 284
             + E    +WGWSW ERW++ARPWE R     ++ ++  +DS  P K
Sbjct:   187 SYELGNTNWGWSWKERWISARPWEVRYSVTPKKPKSSKTDSNSPAK 232

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0000394 "RNA splicing, via endonucleolytic cleavage and ligation" evidence=RCA

GO:0009086 "methionine biosynthetic process" evidence=RCA

GO:0048573 "photoperiodism, flowering" evidence=RCA

TAIR|locus:2200945 IQD18 "AT1G01110" [Arabidopsis thaliana (taxid:3702)]

 Score = 222 (83.2 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
 Identities = 69/223 (30%), Positives = 102/223 (45%)

Query:    74 AAMATVVRAPPKDFRAVRQEWAAIRIQTXXXXXXXXXXXXXXXXXXXXQALVRGRQVRKQ 133
             A  A+   AP + + A R+ +AA+ IQT                    QALVRG  VRKQ
Sbjct:   103 ATSASKTLAPRRIYYA-RENYAAVVIQTSFRGYLARRALRALKGLVKLQALVRGHNVRKQ 161

Query:   134 AAVTLRCMQALXXXXXXXXXXXXXMSIEGQ---------AV------QDMMDKRRSQADI 178
             A +TLRCMQAL             +S +G          AV      QD+ D R+S +  
Sbjct:   162 AKMTLRCMQALVRVQSRVLDQRKRLSHDGSRKSAFSDSHAVFESRYLQDLSD-RQSMSRE 220

Query:   179 LKEAEEGWCDSKGTLEDVKTKIQMRQEGAFKRERA-IAYSLAQKQWTSNQNSNSRTNGSI 237
                A E W D   T++ VK  +Q R++ A + ++  ++ + +QK W        RT G+ 
Sbjct:   221 GSSAAEDWDDRPHTIDAVKVMLQRRRDTALRHDKTNLSQAFSQKMW--------RTVGNQ 272

Query:   238 SSLKNQEFDKNSWGWSWLERWMAARPWETRLMEQSQADPSDSI 280
             S+  + E +       WL+RWMA RPW+ R   ++  D   S+
Sbjct:   273 STEGHHEVELEEERPKWLDRWMATRPWDKRASSRASVDQRVSV 315

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2100504 IQD3 "AT3G52290" [Arabidopsis thaliana (taxid:3702)]

 Score = 234 (87.4 bits), Expect = 2.5e-17, P = 2.5e-17
 Identities = 90/319 (28%), Positives = 131/319 (41%)

Query:     5 GGKWVKALIGLKKPE-RDDQEKVGSKGKKWRLXXXXXXXXXXXXXXFKGINHKAAAVSEG 63
             G  W  A+     PE +  +E+   K KKW                +     K A + E 
Sbjct:     2 GKSWFSAVKKALSPEPKQKKEQKPHKSKKW-FGKSKKLDVTNSGAAYSPRTVKDAKLKEI 60

Query:    64 SDSPRTDAFSAAMATV------VRAPPKDFRAVR------------QEWAAIRIQTXXXX 105
              +     A+S A+AT       V A       VR            +E AAI+IQT    
Sbjct:    61 EEQQSRHAYSVAIATAAAAEAAVAAAQAAAEVVRLSALSRFPGKSMEEIAAIKIQTAFRG 120

Query:   106 XXXXXXXXXXXXXXXXQALVRGRQVRKQAAVTLRCMQALXXXXXXXXXXXXXMSIEGQAV 165
                             ++LV+G+ VR+QA  TL+ MQ L             +S + QA+
Sbjct:   121 YMARRALRALRGLVRLKSLVQGKCVRRQATSTLQSMQTLARVQYQIRERRLRLSEDKQAL 180

Query:   166 QDMMDKRRSQADILKEAEEGWCDSKGTLEDVKTKIQMRQEGAFKRERAIAYSLA-QKQWT 224
                + ++ ++ D  K  E  W DS  + E V+  +  +Q    +RE+A+AY+ + Q  W 
Sbjct:   181 TRQLQQKHNK-DFDKTGEN-WNDSTLSREKVEANMLNKQVATMRREKALAYAFSHQNTW- 237

Query:   225 SNQNSNSRTNGSISSLKNQEF-DKNS--WGWSWLERWMAARPWETRLMEQSQADPSDSIP 281
                  NS   GS      Q F D N+  WGWSWLERWMAARP E   +    A+   S  
Sbjct:   238 ----KNSTKMGS------QTFMDPNNPHWGWSWLERWMAARPNENHSLTPDNAEKDSSAR 287

Query:   282 PLKSCADSLVGTRSRSSEP 300
              + S A S +  R ++  P
Sbjct:   288 SVASRAMSEMIPRGKNLSP 306

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2134628 iqd17 "AT4G00820" [Arabidopsis thaliana (taxid:3702)]

 Score = 211 (79.3 bits), Expect = 2.2e-14, P = 2.2e-14
 Identities = 72/231 (31%), Positives = 104/231 (45%)

Query:    91 RQEWAAIRIQTXXXXXXXXXXXXXXXXXXXXQALVRGRQVRKQAAVTLRCMQALXXXXXX 150
             R+++AA+ IQT                    QALVRG  VRKQA +TLRCMQAL      
Sbjct:   130 REDYAAVVIQTGFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQSR 189

Query:   151 XXXXXXXMSIEGQA------VQDMMDKRRSQ--ADILKEAEEG------WCDSKGTLEDV 196
                    +S +G         Q +++ R  Q  +D    + EG      W D   T+E+V
Sbjct:   190 VLDQRKRLSHDGSRKSAFSDTQSVLESRYLQEISDRRSMSREGSSIAEDWDDRPHTIEEV 249

Query:   197 KTKIQMRQEGAFKRERAIAYSLAQKQWTSNQNSNSRTNGSISSLKNQEFDKNSWGWSWLE 256
             K  +Q R++ A +RE   + S A     S+Q    RT GS S+    E+++      WL+
Sbjct:   250 KAMLQQRRDNALRRESNNSISQA----FSHQVR--RTRGSYST--GDEYEEERP--KWLD 299

Query:   257 RWMAARPWETRLMEQSQADPS------DSIPPLKSCADSLVGTR-SRSSEP 300
             RWMA++PW+ R     +  P       D+  P  +  +S  G   SRS  P
Sbjct:   300 RWMASKPWDKRASTDQRVPPVYKTVEIDTSQPYLTRGNSRTGASPSRSQRP 350

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00032189001 SubName- Full=Chromosome chr4 scaffold_6, whole genome shotgun sequence; (430 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	455
KOG0160	862	consensus Myosin class V heavy chain [Cytoskeleton	97.88
PF00612	21	IQ: IQ calmodulin-binding motif; InterPro: IPR0000	97.85
PF13178	102	DUF4005: Protein of unknown function (DUF4005)	97.68
KOG0160	862	consensus Myosin class V heavy chain [Cytoskeleton	97.6
smart00015	26	IQ Short calmodulin-binding motif containing conse	97.32
KOG0520	975	consensus Uncharacterized conserved protein, conta	97.0
PTZ00014	821	myosin-A; Provisional	96.75
KOG0164	1001	consensus Myosin class I heavy chain [Cytoskeleton	96.4
COG5022	1463	Myosin heavy chain [Cytoskeleton]	95.72
PF00612	21	IQ: IQ calmodulin-binding motif; InterPro: IPR0000	95.42
PTZ00014	821	myosin-A; Provisional	94.04
KOG2128	1401	consensus Ras GTPase-activating protein family - I	93.97
smart00015	26	IQ Short calmodulin-binding motif containing conse	92.87
KOG0520	975	consensus Uncharacterized conserved protein, conta	88.88
COG5022	1463	Myosin heavy chain [Cytoskeleton]	88.26
KOG4427	1096	consensus E3 ubiquitin protein ligase [Posttransla	84.31
KOG0377	631	consensus Protein serine/threonine phosphatase RDG	82.85

>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton]

Probab=97.88  E-value=4.7e-05  Score=86.26  Aligned_cols=69  Identities=29%  Similarity=0.348  Sum_probs=56.0

Q ss_pred             HHHHHHHHHHHHHHhhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhh
Q 012853           90 VRQEWAAIRIQTAFRGFLARRALRALK-GVVRLQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSIEG  162 (455)
Q Consensus        90 ~ree~AAI~IQsafRgylARR~~raLk-giVrLQAlvRG~lvRrq~~~tlr~~~AaVrIQa~vRg~raR~~~~g  162 (455)
                      .....+++.||+.||+|++|+.|..++ +++.||+++||++.|+.   .+ ...|++.||..+|++..|+.+..
T Consensus       670 ~vl~~~~~~iq~~~r~~~~r~~f~~~r~~~~~~Q~~~rG~~~r~~---~~-~~~aai~~q~~~r~~~~r~~y~~  739 (862)
T KOG0160|consen  670 DVLSAAKVLIQRQIRGYLARKKFLQLRSAVIIIQAYSRGVLARRE---TE-REAAAIGIQKECRSYLNRRRYRA  739 (862)
T ss_pred             HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHh---hH-HHHHHHHhHHHHHHHHHHHHHHH
Confidence            345678888999999999999996555 99999999999999982   23 66788888888888888877654

>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K

Probab=97.85  E-value=1.9e-05  Score=49.77  Aligned_cols=21  Identities=48%  Similarity=0.718  Sum_probs=18.8

Q ss_pred             HHHHHHHHHHHhhHHHHHHHH
Q 012853           93 EWAAIRIQTAFRGFLARRALR  113 (455)
Q Consensus        93 e~AAI~IQsafRgylARR~~r  113 (455)
                      +.|||+||+.||||++|+.|+
T Consensus         1 ~~aai~iQ~~~R~~~~Rk~~k   21 (21)
T PF00612_consen    1 RKAAIIIQSYWRGYLARKRYK   21 (21)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHhcC
Confidence            468999999999999999884

The IQ motif, which can be present in one or more copies, serves as a binding site for different EF-hand proteins including the essential and regulatory myosin light chains, calmodulin (CaM), and CaM-like proteins [, ].Many IQ motifs are protein kinase C (PKC) phosphorylation sites [, ]. Resolution of the 3D structure of scallop myosin has shown that the IQ motif forms a basic amphipathic helix []. Some proteins known to contain an IQ motif are listed below: A number of conventional and unconventional myosins. Neuromodulin (GAP-43). This protein is associated with nerve growth. It is a major component of the motile "growth cones" that form the tips of elongating axons. Neurogranin (NG/p17). Acts as a "third messenger" substrate of protein kinase C-mediated molecular cascades during synaptic development and remodeling. Sperm surface protein Sp17. Ras GTPase-activating-like protein IQGAP1. IQGAP1 contains 4 IQ motifs. This entry covers the entire IQ motif.; GO: 0005515 protein binding; PDB: 2DFS_A 2IX7_C 1OE9_A 1W7J_A 1W7I_A 1KQM_A 1KK7_A 1WDC_A 1DFL_A 1B7T_A ....

>PF13178 DUF4005: Protein of unknown function (DUF4005)

Probab=97.68  E-value=3.5e-05  Score=66.79  Aligned_cols=19  Identities=53%  Similarity=0.670  Sum_probs=17.9

Q ss_pred             CCCcccchhhhHHhhhhcC
Q 012853          371 RPNYMNLTESTKAKQRINQ  389 (455)
Q Consensus       371 ~PsYM~lT~S~kAK~r~~~  389 (455)
                      .|+||+.|||+|||+|.++
T Consensus        34 ~PsYMa~TeSakAK~RsqS   52 (102)
T PF13178_consen   34 LPSYMAATESAKAKARSQS   52 (102)
T ss_pred             CCCccchhhhhhhhhhccC
Confidence            8999999999999999874

>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton]

Probab=97.60  E-value=0.00027  Score=80.32  Aligned_cols=79  Identities=24%  Similarity=0.280  Sum_probs=67.7

Q ss_pred             hHHhhCCchhH----HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 012853           77 ATVVRAPPKDF----RAVRQEWAAIRIQTAFRGFLARRALRALKGVVRLQALVRGRQVRKQAAVTLRCMQALVRVQARVR  152 (455)
Q Consensus        77 ~~v~~~~~~~~----e~~ree~AAI~IQsafRgylARR~~raLkgiVrLQAlvRG~lvRrq~~~tlr~~~AaVrIQa~vR  152 (455)
                      ++++|+.++.+    .+++...+++.||+.+||+++|+......+.|.||..+|+++.|+++   .....+++.||+.+|
T Consensus       676 ~~~iq~~~r~~~~r~~f~~~r~~~~~~Q~~~rG~~~r~~~~~~~aai~~q~~~r~~~~r~~y---~~~~~~~~~~qs~~r  752 (862)
T KOG0160|consen  676 KVLIQRQIRGYLARKKFLQLRSAVIIIQAYSRGVLARRETEREAAAIGIQKECRSYLNRRRY---RALIPASITIQSGVR  752 (862)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
Confidence            45688888776    34567899999999999999998444445999999999999999999   667789999999999


Q ss_pred             HHHHHH
Q 012853          153 ARRVRM  158 (455)
Q Consensus       153 g~raR~  158 (455)
                      +..+|.
T Consensus       753 ~~~~r~  758 (862)
T KOG0160|consen  753 AMLARN  758 (862)
T ss_pred             HHHhcc
Confidence            999997

>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues

Probab=97.32  E-value=0.00019  Score=47.30  Aligned_cols=22  Identities=50%  Similarity=0.738  Sum_probs=19.8

Q ss_pred             HHHHHHHHHHHHhhHHHHHHHH
Q 012853           92 QEWAAIRIQTAFRGFLARRALR  113 (455)
Q Consensus        92 ee~AAI~IQsafRgylARR~~r  113 (455)
                      ++.+|++||+.||||++|+.|+
T Consensus         2 ~~~aa~~IQa~~Rg~~~r~~y~   23 (26)
T smart00015        2 LTRAAIIIQAAWRGYLARKRYK   23 (26)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhh
Confidence            4789999999999999999984

Calmodulin-binding motif.

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]

Probab=97.00  E-value=0.001  Score=76.13  Aligned_cols=74  Identities=32%  Similarity=0.385  Sum_probs=62.0

Q ss_pred             HHHHHHHHHHHHhhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH-------HHHHhHHHHHHHHHHHHHHHHhhhhh
Q 012853           92 QEWAAIRIQTAFRGFLARRALRALK-GVVRLQALVRGRQVRKQAAVT-------LRCMQALVRVQARVRARRVRMSIEGQ  163 (455)
Q Consensus        92 ee~AAI~IQsafRgylARR~~raLk-giVrLQAlvRG~lvRrq~~~t-------lr~~~AaVrIQa~vRg~raR~~~~g~  163 (455)
                      -..||..||..||||+.|+.|..++ -+|+||+.+||+.+|++|...       .+-.-++-++|+.+|++..|...+.+
T Consensus       809 ~~~aa~~iq~~f~~yk~r~~~l~tr~p~v~iqa~~rg~q~r~dy~ki~wSv~~lek~~lrwR~k~~g~Rgfk~~~~~e~~  888 (975)
T KOG0520|consen  809 DPAAASRIQKKFRGYKQRKEFLSTRQPIVKIQAAVRGYQVRKDYRKITWSVGVLEKLILRWRRKGKGFRGFKGRALFEEQ  888 (975)
T ss_pred             chhHHHHhhhhhhhHHhhhhhcccCCccccchhhhhchhHhhhhheechhhhHHHHHHHHHHHhhhhhcccccccchhcc
Confidence            3578999999999999999997776 999999999999999999632       12466778899999999998887765


Q ss_pred             hH
Q 012853          164 AV  165 (455)
Q Consensus       164 ~~  165 (455)
                      ..
T Consensus       889 ~~  890 (975)
T KOG0520|consen  889 ET  890 (975)
T ss_pred             cc
Confidence            43

>PTZ00014 myosin-A; Provisional

Probab=96.75  E-value=0.0029  Score=72.25  Aligned_cols=41  Identities=20%  Similarity=0.169  Sum_probs=34.4

Q ss_pred             HHHHHHHHHHhhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Q 012853           94 WAAIRIQTAFRGFLARRALRALK-GVVRLQALVRGRQVRKQA  134 (455)
Q Consensus        94 ~AAI~IQsafRgylARR~~raLk-giVrLQAlvRG~lvRrq~  134 (455)
                      ..++.||++||||++|+.|..++ ++++||+.+||+++++..
T Consensus       778 ~~~~~iq~~~r~~~~r~~~~~~~~~~~~iQ~~~R~~l~~~~~  819 (821)
T PTZ00014        778 PLVSVLEALILKIKKKRKVRKNIKSLVRIQAHLRRHLVIAEI  819 (821)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            47889999999999999996654 899999999999888753

>KOG0164 consensus Myosin class I heavy chain [Cytoskeleton]

Probab=96.40  E-value=0.014  Score=65.43  Aligned_cols=63  Identities=22%  Similarity=0.295  Sum_probs=47.0

Q ss_pred             HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhh
Q 012853           90 VRQEWAAIRIQTAFRGFLARRALRALKGVVRLQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSIEG  162 (455)
Q Consensus        90 ~ree~AAI~IQsafRgylARR~~raLkgiVrLQAlvRG~lvRrq~~~tlr~~~AaVrIQa~vRg~raR~~~~g  162 (455)
                      .+.-.-|+.||++||||++|..|+.++++..|-.++|.+.++-          .+-.||.++|+++.++.+..
T Consensus       693 ~~l~~lvtllQK~~RG~~~R~ry~rmka~~~ii~wyR~~K~ks----------~v~el~~~~rg~k~~r~ygk  755 (1001)
T KOG0164|consen  693 ERLPSLVTLLQKAWRGWLARQRYRRMKASATIIRWYRRYKLKS----------YVQELQRRFRGAKQMRDYGK  755 (1001)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHhhhhccccCC
Confidence            3445679999999999999999999985555444888554432          34578999999988776543

>COG5022 Myosin heavy chain [Cytoskeleton]

Probab=95.72  E-value=0.1  Score=62.35  Aligned_cols=69  Identities=25%  Similarity=0.304  Sum_probs=52.5

Q ss_pred             HHHHHHHHHHHHHHhhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHh
Q 012853           90 VRQEWAAIRIQTAFRGFLARRAL-RALKGVVRLQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMS  159 (455)
Q Consensus        90 ~ree~AAI~IQsafRgylARR~~-raLkgiVrLQAlvRG~lvRrq~~~tlr~~~AaVrIQa~vRg~raR~~  159 (455)
                      ......|++||++|||++.|++| ++++.+..+|...+|..+|+.+ ..-....+.+++|..+|...-|..
T Consensus       742 ~~~~~~~~~iq~aiR~~~~rrr~~~~~k~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~r~~  811 (1463)
T COG5022         742 AKLDNIATRIQRAIRGRYLRRRYLQALKRIKKIQVIQHGFRLRRLV-DYELKWRLFIKLQPLLSLLGSRKE  811 (1463)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhc-ccchHHHhHHHhhHHhHHHhhHHH
Confidence            45678999999999999999999 6677888888888888888655 333345567777777776655543

>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K

Probab=95.42  E-value=0.02  Score=35.98  Aligned_cols=19  Identities=32%  Similarity=0.417  Sum_probs=13.9

Q ss_pred             HHHHHHHHHHHHHHHHHHH
Q 012853          116 KGVVRLQALVRGRQVRKQA  134 (455)
Q Consensus       116 kgiVrLQAlvRG~lvRrq~  134 (455)
                      +++|.||+.+||+++|+++
T Consensus         2 ~aai~iQ~~~R~~~~Rk~~   20 (21)
T PF00612_consen    2 KAAIIIQSYWRGYLARKRY   20 (21)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhc
Confidence            3677777777777777765

The IQ motif, which can be present in one or more copies, serves as a binding site for different EF-hand proteins including the essential and regulatory myosin light chains, calmodulin (CaM), and CaM-like proteins [, ].Many IQ motifs are protein kinase C (PKC) phosphorylation sites [, ]. Resolution of the 3D structure of scallop myosin has shown that the IQ motif forms a basic amphipathic helix []. Some proteins known to contain an IQ motif are listed below: A number of conventional and unconventional myosins. Neuromodulin (GAP-43). This protein is associated with nerve growth. It is a major component of the motile "growth cones" that form the tips of elongating axons. Neurogranin (NG/p17). Acts as a "third messenger" substrate of protein kinase C-mediated molecular cascades during synaptic development and remodeling. Sperm surface protein Sp17. Ras GTPase-activating-like protein IQGAP1. IQGAP1 contains 4 IQ motifs. This entry covers the entire IQ motif.; GO: 0005515 protein binding; PDB: 2DFS_A 2IX7_C 1OE9_A 1W7J_A 1W7I_A 1KQM_A 1KK7_A 1WDC_A 1DFL_A 1B7T_A ....

>PTZ00014 myosin-A; Provisional

Probab=94.04  E-value=0.14  Score=58.92  Aligned_cols=40  Identities=28%  Similarity=0.350  Sum_probs=35.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHh
Q 012853          117 GVVRLQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMS  159 (455)
Q Consensus       117 giVrLQAlvRG~lvRrq~~~tlr~~~AaVrIQa~vRg~raR~~  159 (455)
                      .++.||+++||++.|+.+   ++..+++++||+.+|++.+++.
T Consensus       779 ~~~~iq~~~r~~~~r~~~---~~~~~~~~~iQ~~~R~~l~~~~  818 (821)
T PTZ00014        779 LVSVLEALILKIKKKRKV---RKNIKSLVRIQAHLRRHLVIAE  818 (821)
T ss_pred             HHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhc
Confidence            567899999999999998   5668899999999999998754

>KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms]

Probab=93.97  E-value=0.15  Score=60.83  Aligned_cols=70  Identities=31%  Similarity=0.433  Sum_probs=57.2

Q ss_pred             HHHHHHHHHHHHhhHHH---HHHH--HHHHHHHHHHHHHHHHHHHHHHHHHH----HHHhHHHHHHHHHHHHHHHHhhh
Q 012853           92 QEWAAIRIQTAFRGFLA---RRAL--RALKGVVRLQALVRGRQVRKQAAVTL----RCMQALVRVQARVRARRVRMSIE  161 (455)
Q Consensus        92 ee~AAI~IQsafRgylA---RR~~--raLkgiVrLQAlvRG~lvRrq~~~tl----r~~~AaVrIQa~vRg~raR~~~~  161 (455)
                      +....+-||..||||+.   +..|  ...+.+|.+|++.||+++|+.+...+    .+|...+.||+.+|.+..|..+.
T Consensus       564 ~~P~~~diq~~vr~~~~~~~~~~~~~~~~~evv~~qs~~R~~lsrk~~~~~~q~~~~~~~~~i~iqs~~r~f~~r~~y~  642 (1401)
T KOG2128|consen  564 QTPFVVDIQALVRGILQYIPRDVYLDSAKKEVVKFQSLTRGALSRKKYSRKLQYFKDNMTKIIKIQSKIRKFPNRKDYK  642 (1401)
T ss_pred             cCchHHHHHHHHHHHhhhchHHHHHHHhhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhhhHHHHHHHHHhcccchHHH
Confidence            67788999999999995   2222  33469999999999999999886433    47999999999999999887765

>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues

Probab=92.87  E-value=0.12  Score=33.91  Aligned_cols=19  Identities=32%  Similarity=0.410  Sum_probs=14.7

Q ss_pred             HHHHHHHHHHHHHHHHHHH
Q 012853          116 KGVVRLQALVRGRQVRKQA  134 (455)
Q Consensus       116 kgiVrLQAlvRG~lvRrq~  134 (455)
                      ++++.||+.+||+++|+.+
T Consensus         4 ~aa~~IQa~~Rg~~~r~~y   22 (26)
T smart00015        4 RAAIIIQAAWRGYLARKRY   22 (26)
T ss_pred             HHHHHHHHHHHHHHHHHhh
Confidence            4677888888888888776

Calmodulin-binding motif.

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]

Probab=88.88  E-value=0.84  Score=53.22  Aligned_cols=67  Identities=27%  Similarity=0.342  Sum_probs=45.9

Q ss_pred             HHHHHHHHHHHhhHHHHHHHHHH-------H----HHHHHHHHHHHHHHHHHH----------------------HHHHH
Q 012853           93 EWAAIRIQTAFRGFLARRALRAL-------K----GVVRLQALVRGRQVRKQA----------------------AVTLR  139 (455)
Q Consensus        93 e~AAI~IQsafRgylARR~~raL-------k----giVrLQAlvRG~lvRrq~----------------------~~tlr  139 (455)
                      ..-+|+||+++|||..|+.|+.+       +    ..-++|.-+||+..|+.+                      ....+
T Consensus       833 r~p~v~iqa~~rg~q~r~dy~ki~wSv~~lek~~lrwR~k~~g~Rgfk~~~~~e~~~~a~t~~e~~yd~yKq~~~~~~~r  912 (975)
T KOG0520|consen  833 RQPIVKIQAAVRGYQVRKDYRKITWSVGVLEKLILRWRRKGKGFRGFKGRALFEEQETAATVIEDCYDFYKQLRKQTEER  912 (975)
T ss_pred             CCccccchhhhhchhHhhhhheechhhhHHHHHHHHHHHhhhhhcccccccchhccccccchHHHHHHHHHHHHHHHHHH
Confidence            35578888888888888888543       1    333557777777665432                      12344


Q ss_pred             HHhHHHHHHHHHHHHHHHHh
Q 012853          140 CMQALVRVQARVRARRVRMS  159 (455)
Q Consensus       140 ~~~AaVrIQa~vRg~raR~~  159 (455)
                      ..+|+++||+.+|.+.++..
T Consensus       913 ~~~A~~~VQsm~rs~~a~qq  932 (975)
T KOG0520|consen  913 LTRAVVRVQSMFRSPKAQQQ  932 (975)
T ss_pred             HHHHHHHHHHHhcCHHHHHH
Confidence            57899999999999988843

>COG5022 Myosin heavy chain [Cytoskeleton]

Probab=88.26  E-value=5.8  Score=48.25  Aligned_cols=85  Identities=21%  Similarity=0.276  Sum_probs=53.0

Q ss_pred             hhhhhhhhHHhhCCchhHHHHHHHHHHHHHHHHHh----hHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 012853           70 DAFSAAMATVVRAPPKDFRAVRQEWAAIRIQTAFR----GFLARRAL---RALKGVVRLQALVRGRQVRKQAAVTLRCMQ  142 (455)
Q Consensus        70 ~~~~~~~~~v~~~~~~~~e~~ree~AAI~IQsafR----gylARR~~---raLkgiVrLQAlvRG~lvRrq~~~tlr~~~  142 (455)
                      +++-..+++.+|+..|++=..|+..++.++|..++    |++.|+.+   .-++..++||.+++...-|+.+   .....
T Consensus       741 d~~~~~~~~~iq~aiR~~~~rrr~~~~~k~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~r~~~---~~~~~  817 (1463)
T COG5022         741 DAKLDNIATRIQRAIRGRYLRRRYLQALKRIKKIQVIQHGFRLRRLVDYELKWRLFIKLQPLLSLLGSRKEY---RSYLA  817 (1463)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccchHHHhHHHhhHHhHHHhhHHHH---HHHHH
Confidence            44555667788998886645555566665555554    77777666   2235888888888888888877   33444


Q ss_pred             HHHHHH-HHHHHHHHH
Q 012853          143 ALVRVQ-ARVRARRVR  157 (455)
Q Consensus       143 AaVrIQ-a~vRg~raR  157 (455)
                      .++.+| ...+...++
T Consensus       818 ~i~~lq~~i~~~~~~~  833 (1463)
T COG5022         818 CIIKLQKTIKREKKLR  833 (1463)
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            455566 333333333

>KOG4427 consensus E3 ubiquitin protein ligase [Posttranslational modification, protein turnover, chaperones]

Probab=84.31  E-value=1.4  Score=50.44  Aligned_cols=26  Identities=35%  Similarity=0.473  Sum_probs=22.9

Q ss_pred             HHHHHHHHHHHHHHHHhhHHHHHHHH
Q 012853           88 RAVRQEWAAIRIQTAFRGFLARRALR  113 (455)
Q Consensus        88 e~~ree~AAI~IQsafRgylARR~~r  113 (455)
                      -..|.+.||+.||.+||||++|+.|+
T Consensus        25 ~qrrr~~aa~~iq~~lrsyl~Rkk~~   50 (1096)
T KOG4427|consen   25 YQRRREAAALFIQRVLRSYLVRKKAQ   50 (1096)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34678999999999999999999984

>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]

Probab=82.85  E-value=2.1  Score=46.41  Aligned_cols=35  Identities=34%  Similarity=0.232  Sum_probs=28.8

Q ss_pred             HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 012853           90 VRQEWAAIRIQTAFRGFLARRALRALKGVVRLQAL  124 (455)
Q Consensus        90 ~ree~AAI~IQsafRgylARR~~raLkgiVrLQAl  124 (455)
                      .|...||+.||++||+|.||...+..-....+|++
T Consensus        14 ~raikaAilIQkWYRr~~ARle~rrr~twqIFqsl   48 (631)
T KOG0377|consen   14 TRAIKAAILIQKWYRRYEARLEARRRCTWQIFQSL   48 (631)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhHH
Confidence            34578999999999999999988776666677775

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	455
2ycu_A	995	Non muscle myosin 2C, alpha-actinin; motor protein	1e-10
2ycu_A	995	Non muscle myosin 2C, alpha-actinin; motor protein	2e-08
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	1e-09
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	3e-08
1g8x_A	1010	Myosin II heavy chain fused to alpha-actinin 3; mo	9e-09
2ix7_C	58	Myosin-5A; contractIle protein/metal binding, acti	4e-08
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	7e-07
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	1e-06
1kk8_A	837	Myosin heavy chain, striated muscle; actin-detache	4e-05

>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* Length = 995

 Score = 62.4 bits (152), Expect = 1e-10
 Identities = 20/142 (14%), Positives = 43/142 (30%), Gaps = 17/142 (11%)

Query: 88  RAVRQEWAAI--RIQTAFRGFLARRA----LRALKGVVRLQALVRGRQVRKQAAVTLRCM 141
           RA  Q  +    R     +    ++A          +  +Q+ +   +  K+        
Sbjct: 754 RASEQTKSDYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTE-KPPKG 812

Query: 142 QALVRVQARVRARRVRMSIEGQAVQDMMDKRRSQADILKEAEEGWCDSKGTLEDVKTKIQ 201
           Q +  ++A   + + ++          + KR                +   LE  + +  
Sbjct: 813 QEVSELEAIYNSLQTKLR---------LIKREPFVAPAGLTPNEIDSTWSALEKAEQEHA 863

Query: 202 MRQEGAFKRERAIAYSLAQKQW 223
                  KR++ IA  L QK  
Sbjct: 864 EALRIELKRQKKIA-VLLQKYN 884

>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* Length = 995

 Score = 55.8 bits (135), Expect = 2e-08
 Identities = 11/164 (6%), Positives = 40/164 (24%), Gaps = 7/164 (4%)

Query: 85  KDFRAVRQE-WAAIRIQTAFRGFLARRALRAL---KGVVRLQALVRGRQVRKQAAVTLRC 140
           +     R    +   +Q+        +        + V  L+A+    Q + +       
Sbjct: 778 QASLESRDFGDSIESVQSFMNAHKEYKKTEKPPKGQEVSELEAIYNSLQTKLRLIKREPF 837

Query: 141 MQALVRVQARVRARRVRMSIEGQAVQDMMDKRRSQADILKEAEEGWCDSKGTLEDVKTKI 200
           +         + +    +    Q   + +     +   +    + +      LE+     
Sbjct: 838 VAPAGLTPNEIDSTWSALEKAEQEHAEALRIELKRQKKIAVLLQKYNRILKKLEN---WA 894

Query: 201 QMRQEGAFKRERAIAYSLAQKQWTSNQNSNSRTNGSISSLKNQE 244
             +       E   + +  Q +  + +  +           +  
Sbjct: 895 TTKSVYLGSNETGDSITAVQAKLKNLEAFDGECQSLEGQSNSDL 938

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080

 Score = 59.7 bits (145), Expect = 1e-09
 Identities = 33/146 (22%), Positives = 55/146 (37%), Gaps = 10/146 (6%)

Query: 86  DFRAVRQEWAAIRIQTAFRGFLARRA-LRALKGVVRLQALVRGRQVRKQAAVTLRCMQAL 144
             RA +   A IRIQ   RG+L R+  +R  +  + +Q  VRG Q R  A   LR  +A 
Sbjct: 761 KIRADKLRAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARCYATF-LRRTRAA 819

Query: 145 VRVQARVRARRVR--------MSIEGQAVQDMMDKRRSQADILKEAEEGWCDSKGTLEDV 196
           + +Q   R   VR         +I  QA+      R     +L+E +             
Sbjct: 820 IIIQKFQRMYVVRKRYQCMRDATIALQALLRGYLVRNKYQMMLREHKSIIIQKHVRGWLA 879

Query: 197 KTKIQMRQEGAFKRERAIAYSLAQKQ 222
           +       +     +      +A+++
Sbjct: 880 RVHYHRTLKAIVYLQCCYRRMMAKRE 905

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080

 Score = 55.1 bits (133), Expect = 3e-08
 Identities = 28/130 (21%), Positives = 51/130 (39%), Gaps = 15/130 (11%)

Query: 85  KDFRAVRQEWAAIRIQTAFRGFLARRALRALK-GVVRLQALVRGRQVRKQAAVTLRCMQA 143
                +R+  AAI IQ   R ++ R+  + ++   + LQAL+RG  VR +  + LR    
Sbjct: 808 CYATFLRRTRAAIIIQKFQRMYVVRKRYQCMRDATIALQALLRGYLVRNKYQMMLR-EHK 866

Query: 144 LVRVQARVRARRVRMS--------IEGQAVQDMMDKRRSQADILKEAEEGWCDSKGTLED 195
            + +Q  VR    R+         +  Q     M  +R +   LK        S    + 
Sbjct: 867 SIIIQKHVRGWLARVHYHRTLKAIVYLQCCYRRMMAKR-ELKKLKIEAR----SVERYKK 921

Query: 196 VKTKIQMRQE 205
           +   ++ +  
Sbjct: 922 LHIGLENKIM 931

>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1 Length = 1010

 Score = 57.0 bits (138), Expect = 9e-09
 Identities = 23/198 (11%), Positives = 54/198 (27%), Gaps = 21/198 (10%)

Query: 88  RAVRQEWAAIRIQTAFRGFLARRALRALK----------GVVRLQALVRGRQVRKQAAVT 137
           R  R      +     R     + +   +           +  +Q+ +   +  K+    
Sbjct: 758 REQRLGSEQTKSDYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTE-K 816

Query: 138 LRCMQALVRVQARVRARRVRMSIEGQAVQDMMDKRRSQADILKEAEEGWCDSKGTLEDVK 197
               Q +  ++A   + + ++          + KR                +   LE  +
Sbjct: 817 PPKGQEVSELEAIYNSLQTKLR---------LIKREPFVAPAGLTPNEIDSTWSALEKAE 867

Query: 198 TKIQMRQEGAFKRERAIAYSLAQKQWTSNQNSNSRTNGSISSLKNQEFDKNSWGWSWLER 257
            +         KR++ IA  L QK     +   +        L + E   +        +
Sbjct: 868 QEHAEALRIELKRQKKIAVLL-QKYNRILKKLENWATTKSVYLGSNETGDSITAVQAKLK 926

Query: 258 WMAARPWETRLMEQSQAD 275
            + A   E + +E     
Sbjct: 927 NLEAFDGECQSLEGQSNS 944

>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58

 Score = 48.7 bits (117), Expect = 4e-08
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 2/54 (3%)

Query: 91  RQEWAAIRIQTAFRGFLARRA-LRALKGVVRLQALVRGRQVRKQAAVTLRCMQA 143
           +   A IRIQ   RG+L R+  L   +  + +Q  VRG Q R  A   LR  +A
Sbjct: 3   KLRAACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYAK-FLRRTKA 55

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184

 Score = 51.0 bits (122), Expect = 7e-07
 Identities = 27/141 (19%), Positives = 47/141 (33%), Gaps = 8/141 (5%)

Query: 88  RAVRQEWAAIRIQTAFRGFLARRALRALK----GVVRLQALVRGRQVRKQAAVTLRCMQA 143
           R ++     I  Q   RG+LAR+A    +     +  +Q  VR                 
Sbjct: 787 RDLKITDVIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMNVXHWPWMXLFFXI 846

Query: 144 LVRVQ-ARVRARRVRMSIEGQAVQDMMDKRRSQADILKEAEEGWCDSKGTLEDVKTKIQM 202
              ++  R          E Q  ++   K  ++   L++     C+ K  L+    K+Q 
Sbjct: 847 XPLLKVTRQEEEMQAKDEELQRTKERQQKAEAELKELEQKHTQLCEEKNLLQ---EKLQA 903

Query: 203 RQEGAFKRERAIAYSLAQKQW 223
             E   + E       A+KQ 
Sbjct: 904 ETELYAEAEEMRVRLAAKKQE 924

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184

 Score = 50.2 bits (120), Expect = 1e-06
 Identities = 21/138 (15%), Positives = 54/138 (39%), Gaps = 8/138 (5%)

Query: 85  KDFRAVRQEW-AAIRIQTAFRGFLAR----RALRALKGVVRLQALVRGRQVRKQAAVTLR 139
           K F   +Q+  +   IQ   R F+                 L+   +  +++ +     R
Sbjct: 809 KAFAKRQQQLESIFCIQYNVRSFMNVXHWPWMXLFFXIXPLLKVTRQEEEMQAKDEELQR 868

Query: 140 CMQALVRVQARVRARRVRMSIEGQAVQDMMDKRRSQADILKEAEE---GWCDSKGTLEDV 196
             +   + +A ++    + +   +    + +K +++ ++  EAEE        K  LE++
Sbjct: 869 TKERQQKAEAELKELEQKHTQLCEEKNLLQEKLQAETELYAEAEEMRVRLAAKKQELEEI 928

Query: 197 KTKIQMRQEGAFKRERAI 214
             +++ R E   +R + +
Sbjct: 929 LHEMEARIEEEEERSQQL 946

>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ... Length = 837

 Score = 45.0 bits (107), Expect = 4e-05
 Identities = 14/68 (20%), Positives = 27/68 (39%), Gaps = 8/68 (11%)

Query: 86  DFRAVRQEWAAIRIQTAFRGFLARRALRALK----GVVRLQALVRGRQVRKQAAVTLRCM 141
           + R  R        Q   RG+L R+A + L+    G+  +Q  +R   V +      +  
Sbjct: 772 EMRDERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRN----WQWW 827

Query: 142 QALVRVQA 149
           +   +V+ 
Sbjct: 828 KLYSKVKP 835

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	455
2ix7_C	58	Myosin-5A; contractIle protein/metal binding, acti	99.19
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	98.98
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	98.91
1n2d_C	48	IQ2 and IQ3 motifs from MYO2P, A class V myosin; p	98.81
1n2d_C	48	IQ2 and IQ3 motifs from MYO2P, A class V myosin; p	98.5
2ix7_C	58	Myosin-5A; contractIle protein/metal binding, acti	98.1
2l53_B	31	CAM, voltage-gated sodium channel type V alpha iso	97.54
1wdc_A	64	Scallop myosin; calcium binding protein, muscle pr	97.5
2kxw_B	27	Sodium channel protein type 2 subunit alpha; actio	97.46
2bl0_A	63	Major plasmodial myosin heavy chain; muscle protei	97.44
1wdc_A	64	Scallop myosin; calcium binding protein, muscle pr	97.4
2bl0_A	63	Major plasmodial myosin heavy chain; muscle protei	97.36
1kk8_A	837	Myosin heavy chain, striated muscle; actin-detache	97.11
1kk8_A	837	Myosin heavy chain, striated muscle; actin-detache	96.28
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	96.13
3gn4_A	148	Myosin-VI; unconventional myosin, motility, lever	95.31
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	95.03
4dck_A	168	Sodium channel protein type 5 subunit alpha; IQ-mo	90.96
4anj_A	1052	Unconventional myosin-VI, green fluorescent prote;	90.01
1w7j_A	795	Myosin VA; motor protein, unconventional myosin, m	89.98

>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus}

Probab=99.19  E-value=5.4e-11  Score=90.84  Aligned_cols=54  Identities=35%  Similarity=0.466  Sum_probs=47.4

Q ss_pred             HHHHHHHHHHHHHhhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 012853           91 RQEWAAIRIQTAFRGFLARRALRALK-GVVRLQALVRGRQVRKQAAVTLRCMQALV  145 (455)
Q Consensus        91 ree~AAI~IQsafRgylARR~~raLk-giVrLQAlvRG~lvRrq~~~tlr~~~AaV  145 (455)
                      +.+.|||+||++||||++|+.|..++ ++|.||+++||+++|+.+ ..++...|++
T Consensus         3 ~~~~aai~IQ~~~Rg~~~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~-~~~r~~~aA~   57 (58)
T 2ix7_C            3 KLRAACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYA-KFLRRTKAAT   57 (58)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHcCcc
Confidence            46789999999999999999998887 999999999999999998 5566666654

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}

Probab=98.98  E-value=9e-10  Score=125.68  Aligned_cols=71  Identities=28%  Similarity=0.384  Sum_probs=44.6

Q ss_pred             HHHHHHHHHHHHHHhhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhh
Q 012853           90 VRQEWAAIRIQTAFRGFLARRALRALK-GVVRLQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSIE  161 (455)
Q Consensus        90 ~ree~AAI~IQsafRgylARR~~raLk-giVrLQAlvRG~lvRrq~~~tlr~~~AaVrIQa~vRg~raR~~~~  161 (455)
                      +++..||++||++||||++|+.|..++ +++.||+++||+++|+++ ..++...|++.||+.||++.+|+.+.
T Consensus       813 lr~~~AAi~IQs~~Rg~~~Rk~y~~lr~aai~IQs~~Rg~laRr~~-~~lr~~~aav~IQ~~~Rg~l~R~~y~  884 (1080)
T 2dfs_A          813 LRRTRAAIIIQKFQRMYVVRKRYQCMRDATIALQALLRGYLVRNKY-QMMLREHKSIIIQKHVRGWLARVHYH  884 (1080)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHTTTHHHHHTT
T ss_pred             cccchhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            345566666666666666666665554 666777777777777666 33444556666666666666665543

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}

Probab=98.91  E-value=3.8e-09  Score=120.59  Aligned_cols=70  Identities=33%  Similarity=0.412  Sum_probs=63.7

Q ss_pred             HHHHHHHHHHHHhhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhh
Q 012853           92 QEWAAIRIQTAFRGFLARRALRALK-GVVRLQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSIEG  162 (455)
Q Consensus        92 ee~AAI~IQsafRgylARR~~raLk-giVrLQAlvRG~lvRrq~~~tlr~~~AaVrIQa~vRg~raR~~~~g  162 (455)
                      ...||++||++||||++|+.|..++ +++.||+++||+++|+++ ..++...|+++||+.||+|.+|+.+..
T Consensus       767 l~~aa~~IQa~~Rg~l~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~-~~lr~~~AAi~IQs~~Rg~~~Rk~y~~  837 (1080)
T 2dfs_A          767 LRAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARCYA-TFLRRTRAAIIIQKFQRMYVVRKRYQC  837 (1080)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhcc-cccccchhHHHHHHHHhhHHHHHHHHH
Confidence            4689999999999999999997776 999999999999999998 567889999999999999999988764

>1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae}

Probab=98.81  E-value=8.6e-09  Score=75.59  Aligned_cols=42  Identities=26%  Similarity=0.370  Sum_probs=34.1

Q ss_pred             HHHHHHHHHHHhhHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH
Q 012853           93 EWAAIRIQTAFRGFLARRALRALK---GVVRLQALVRGRQVRKQA  134 (455)
Q Consensus        93 e~AAI~IQsafRgylARR~~raLk---giVrLQAlvRG~lvRrq~  134 (455)
                      ..|||.||+.||||++|+.|..++   +++.||+++||+++|+.+
T Consensus         3 r~a~i~iQ~~~Rg~l~R~~~~~~~~~~aai~IQ~~~Rg~~~Rk~y   47 (48)
T 1n2d_C            3 SQAIKYLQNNIKGFIIRQRVNDEMKVNCATLLQAAYRGHSIRANV   47 (48)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhh
Confidence            458899999999999999986553   788888888888888765

>1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae}

Probab=98.50  E-value=3.2e-07  Score=67.12  Aligned_cols=44  Identities=18%  Similarity=0.267  Sum_probs=39.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhh
Q 012853          116 KGVVRLQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSI  160 (455)
Q Consensus       116 kgiVrLQAlvRG~lvRrq~~~tlr~~~AaVrIQa~vRg~raR~~~  160 (455)
                      +++|.||+.+||+++|+.+ ..++...|+++||+.|||+.+|+.+
T Consensus         4 ~a~i~iQ~~~Rg~l~R~~~-~~~~~~~aai~IQ~~~Rg~~~Rk~y   47 (48)
T 1n2d_C            4 QAIKYLQNNIKGFIIRQRV-NDEMKVNCATLLQAAYRGHSIRANV   47 (48)
T ss_dssp             HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhHHHHHhh
Confidence            4899999999999999999 5577778999999999999999754

>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus}

Probab=98.10  E-value=1.2e-05  Score=61.07  Aligned_cols=44  Identities=30%  Similarity=0.354  Sum_probs=39.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhh
Q 012853          116 KGVVRLQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSIEG  162 (455)
Q Consensus       116 kgiVrLQAlvRG~lvRrq~~~tlr~~~AaVrIQa~vRg~raR~~~~g  162 (455)
                      .+++.||+.+||+++|+.|   +....+++.||+.+||+.+|+.+..
T Consensus         6 ~aai~IQ~~~Rg~~~Rk~~---~~~r~aai~IQ~~~Rg~~aR~~~~~   49 (58)
T 2ix7_C            6 AACIRIQKTIRGWLLRKRY---LCMQRAAITVQRYVRGYQARCYAKF   49 (58)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5899999999999999999   5556799999999999999987654

>2l53_B CAM, voltage-gated sodium channel type V alpha isoform variant; calmodulin, IQ motif, complex, Ca-binding protein; NMR {Homo sapiens}

Probab=97.54  E-value=5e-05  Score=51.90  Aligned_cols=22  Identities=45%  Similarity=0.608  Sum_probs=20.3

Q ss_pred             HHHHHHHHHHHHHhhHHHHHHH
Q 012853           91 RQEWAAIRIQTAFRGFLARRAL  112 (455)
Q Consensus        91 ree~AAI~IQsafRgylARR~~  112 (455)
                      +||.||++||.+||+|+.|+.+
T Consensus         4 ~Ee~aA~vIQrA~R~yl~rr~~   25 (31)
T 2l53_B            4 SEEVSAMVIQRAFRRHLLQRSL   25 (31)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhh
Confidence            6899999999999999999875

>1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A

Probab=97.50  E-value=0.00026  Score=54.81  Aligned_cols=40  Identities=28%  Similarity=0.371  Sum_probs=21.8

Q ss_pred             HHHHHHHHHHHhhHHHHHHHHHH----HHHHHHHHHHHHHHHHH
Q 012853           93 EWAAIRIQTAFRGFLARRALRAL----KGVVRLQALVRGRQVRK  132 (455)
Q Consensus        93 e~AAI~IQsafRgylARR~~raL----kgiVrLQAlvRG~lvRr  132 (455)
                      ...++.||+++|||++|+.|..+    .++..||..+|+++.++
T Consensus         6 ~~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~l~   49 (64)
T 1wdc_A            6 SKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLR   49 (64)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            34556666666666666666443    14445555555555544

>2kxw_B Sodium channel protein type 2 subunit alpha; action potential, amino acid motifs, animals, autism, biomol brain chemistry; NMR {Rattus norvegicus}

Probab=97.46  E-value=6e-05  Score=50.01  Aligned_cols=21  Identities=38%  Similarity=0.621  Sum_probs=19.1

Q ss_pred             HHHHHHHHHHHHHhhHHHHHH
Q 012853           91 RQEWAAIRIQTAFRGFLARRA  111 (455)
Q Consensus        91 ree~AAI~IQsafRgylARR~  111 (455)
                      +||.||++||.+||+|+.++.
T Consensus         4 ~Ee~aA~vIQrA~R~yl~~~~   24 (27)
T 2kxw_B            4 QEEVSAIVIQRAYRRYLLKQK   24 (27)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHHHHHHHHhh
Confidence            689999999999999999864

>2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=97.44  E-value=0.00021  Score=55.22  Aligned_cols=42  Identities=24%  Similarity=0.094  Sum_probs=19.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHh
Q 012853          118 VVRLQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMS  159 (455)
Q Consensus       118 iVrLQAlvRG~lvRrq~~~tlr~~~AaVrIQa~vRg~raR~~  159 (455)
                      ++.||+.+||+++|+.+...+....|+..||..+|++..++.
T Consensus         7 ~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~lr~   48 (63)
T 2bl0_A            7 VKVVQAAARGWVERKHFRQAREKSVSARIIQDNIRAYLEFKN   48 (63)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            334444444444444443333334444455555555554443

>1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A

Probab=97.40  E-value=0.00038  Score=53.83  Aligned_cols=46  Identities=24%  Similarity=0.172  Sum_probs=40.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhh
Q 012853          116 KGVVRLQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSIE  161 (455)
Q Consensus       116 kgiVrLQAlvRG~lvRrq~~~tlr~~~AaVrIQa~vRg~raR~~~~  161 (455)
                      ..++.||+.+||+++|+.+...+....|+..||..+|++..++...
T Consensus         7 ~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~l~~w~   52 (64)
T 1wdc_A            7 KIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNWQ   52 (64)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCh
Confidence            3788999999999999999777777888889999999999887654

>2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=97.36  E-value=0.00033  Score=54.15  Aligned_cols=43  Identities=21%  Similarity=0.157  Sum_probs=36.8

Q ss_pred             HHHHHHHHHHHHhhHHHHHHHHHH----HHHHHHHHHHHHHHHHHHH
Q 012853           92 QEWAAIRIQTAFRGFLARRALRAL----KGVVRLQALVRGRQVRKQA  134 (455)
Q Consensus        92 ee~AAI~IQsafRgylARR~~raL----kgiVrLQAlvRG~lvRrq~  134 (455)
                      ....++.||+++|||++|+.|..+    .++..||..+|+++.++..
T Consensus         3 l~~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~lr~w   49 (63)
T 2bl0_A            3 IGEIVKVVQAAARGWVERKHFRQAREKSVSARIIQDNIRAYLEFKNW   49 (63)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence            356789999999999999999665    3888999999999987743

>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...

Probab=97.11  E-value=0.00067  Score=75.96  Aligned_cols=44  Identities=27%  Similarity=0.339  Sum_probs=33.8

Q ss_pred             HHHHHHHHHHHHHhhHHHHHHHHHH----HHHHHHHHHHHHHHHHHHH
Q 012853           91 RQEWAAIRIQTAFRGFLARRALRAL----KGVVRLQALVRGRQVRKQA  134 (455)
Q Consensus        91 ree~AAI~IQsafRgylARR~~raL----kgiVrLQAlvRG~lvRrq~  134 (455)
                      +...+|++||++||||++|+.|+.+    .+++.||..+||+++||..
T Consensus       777 ~l~~~~~~iQa~~Rg~l~R~~~~k~~~~r~a~~~IQ~~~R~~~~~r~~  824 (837)
T 1kk8_A          777 RLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNW  824 (837)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcch
Confidence            3456788899999999999988665    3777778888887777654

>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...

Probab=96.28  E-value=0.0086  Score=67.09  Aligned_cols=47  Identities=23%  Similarity=0.140  Sum_probs=40.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhh
Q 012853          116 KGVVRLQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSIEG  162 (455)
Q Consensus       116 kgiVrLQAlvRG~lvRrq~~~tlr~~~AaVrIQa~vRg~raR~~~~g  162 (455)
                      +.++.||+.+||+++|+++...+....|++.||+.||++.+|+.+.-
T Consensus       780 ~~~~~iQa~~Rg~l~R~~~~k~~~~r~a~~~IQ~~~R~~~~~r~~~w  826 (837)
T 1kk8_A          780 KIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNWQW  826 (837)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchHH
Confidence            37889999999999999996555567899999999999999987543

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A

Probab=96.13  E-value=0.0057  Score=70.47  Aligned_cols=42  Identities=26%  Similarity=0.269  Sum_probs=37.1

Q ss_pred             HHHHHHHHHHHHhhHHHHHHHHHH----HHHHHHHHHHHHHHHHHH
Q 012853           92 QEWAAIRIQTAFRGFLARRALRAL----KGVVRLQALVRGRQVRKQ  133 (455)
Q Consensus        92 ee~AAI~IQsafRgylARR~~raL----kgiVrLQAlvRG~lvRrq  133 (455)
                      ...+|+.||++||||++|+.|..+    .+++.||..+||++.|+.
T Consensus       791 l~~~~~~iQ~~~Rg~l~R~~~~k~~~~~~a~~~iQ~~~r~~~~~k~  836 (1184)
T 1i84_S          791 ITDVIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMNVXH  836 (1184)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            347899999999999999999665    399999999999999875

>3gn4_A Myosin-VI; unconventional myosin, motility, lever ARM, 3-helix bundle, actin-binding, ATP-binding, calmodulin-binding, coiled coil; 2.70A {Sus scrofa}

Probab=95.31  E-value=0.02  Score=51.89  Aligned_cols=34  Identities=26%  Similarity=0.515  Sum_probs=22.6

Q ss_pred             HHHHHHHHHHHHhhHHHHHHHHH-HHHHHHHHHHH
Q 012853           92 QEWAAIRIQTAFRGFLARRALRA-LKGVVRLQALV  125 (455)
Q Consensus        92 ee~AAI~IQsafRgylARR~~ra-LkgiVrLQAlv  125 (455)
                      ...|+|+||+++||||+|+.++- +.|+.++.++.
T Consensus        44 R~~~~i~iQktvR~~L~rkkhkPRi~g~~kv~~L~   78 (148)
T 3gn4_A           44 RAEACIKMQKTIRMWLCKRRHKPRIDGLVKVGTLK   78 (148)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            45677777777777777777733 35666665554

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A

Probab=95.03  E-value=0.057  Score=62.30  Aligned_cols=45  Identities=22%  Similarity=0.192  Sum_probs=39.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhh
Q 012853          116 KGVVRLQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSI  160 (455)
Q Consensus       116 kgiVrLQAlvRG~lvRrq~~~tlr~~~AaVrIQa~vRg~raR~~~  160 (455)
                      ..++.||+.+||+++|+.+...+....|++.||+.||+|..++.+
T Consensus       793 ~~~~~iQ~~~Rg~l~R~~~~k~~~~~~a~~~iQ~~~r~~~~~k~~  837 (1184)
T 1i84_S          793 DVIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMNVXHW  837 (1184)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            378899999999999999966555678999999999999998764

>4dck_A Sodium channel protein type 5 subunit alpha; IQ-motif, EF-hand, voltage-gated sodium channel regulation, CTD binds to FGF13 and CAM. CAM binds to Ca2+.; 2.20A {Homo sapiens} PDB: 2kbi_A

Probab=90.96  E-value=0.21  Score=46.01  Aligned_cols=27  Identities=41%  Similarity=0.559  Sum_probs=22.9

Q ss_pred             HHHHHHHHHHHHHHHHhhHHHHHHHHH
Q 012853           88 RAVRQEWAAIRIQTAFRGFLARRALRA  114 (455)
Q Consensus        88 e~~ree~AAI~IQsafRgylARR~~ra  114 (455)
                      ...+++.||++||.+||.|+.|+.++.
T Consensus       125 ~~~~e~~aA~~IQra~R~~~~r~~~~~  151 (168)
T 4dck_A          125 RRKHEEVSAMVIQRAFRRHLLQRSLKH  151 (168)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccccc
Confidence            456789999999999999998887754

>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}

Probab=90.01  E-value=0.53  Score=54.05  Aligned_cols=41  Identities=10%  Similarity=0.114  Sum_probs=31.8

Q ss_pred             HHHHHHHHHHHHhhHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Q 012853           92 QEWAAIRIQTAFRGFLARRALRALK-GVVRLQALVRGRQVRKQ  133 (455)
Q Consensus        92 ee~AAI~IQsafRgylARR~~raLk-giVrLQAlvRG~lvRrq  133 (455)
                      ...+|+.||. +|||++|+.|+.++ +++.+|.+.|+...|+.
T Consensus       774 ~~~~~~~iq~-~r~~l~r~~~~k~~~~a~~i~~~~r~~~~r~~  815 (1052)
T 4anj_A          774 PDHLAELVKR-VNHWLICSRWKKVQWCSLSVIKLKNKIKYRAE  815 (1052)
T ss_dssp             HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4577777775 79999999997776 88888888888765554

>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A

Probab=89.98  E-value=0.23  Score=55.42  Aligned_cols=25  Identities=36%  Similarity=0.582  Sum_probs=22.1

Q ss_pred             HHHHHHHHHHHHhhHHHHHHHHHHH
Q 012853           92 QEWAAIRIQTAFRGFLARRALRALK  116 (455)
Q Consensus        92 ee~AAI~IQsafRgylARR~~raLk  116 (455)
                      ...+|++||++||||++|+.|+.++
T Consensus       767 l~~~~~~iQ~~~Rg~l~R~~~~~~r  791 (795)
T 1w7j_A          767 LRAACIRIQKTIRGWLMRKKYMRMR  791 (795)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4568999999999999999998876

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	455
d2mysa2	794	c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain	2e-06
d1kk8a2	789	c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain	1e-05

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 794

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

 Score = 47.8 bits (113), Expect = 2e-06
 Identities = 14/71 (19%), Positives = 26/71 (36%), Gaps = 8/71 (11%)

Query: 86  DFRAVRQEWAAIRIQTAFRGFLARRALRAL----KGVVRLQALVRGRQVRKQAAVTLRCM 141
           + R  +        Q   RGFL R   RA+    + +  +Q  VR     K        M
Sbjct: 728 EMRDDKLAEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVK----HWPWM 783

Query: 142 QALVRVQARVR 152
           +   +++  ++
Sbjct: 784 KLFFKIKPLLK 794

>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 789

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

 Score = 45.5 bits (107), Expect = 1e-05
 Identities = 13/51 (25%), Positives = 22/51 (43%), Gaps = 4/51 (7%)

Query: 86  DFRAVRQEWAAIRIQTAFRGFLARRALRALK----GVVRLQALVRGRQVRK 132
           + R  R        Q   RG+L R+A + L+    G+  +Q  +R   V +
Sbjct: 724 EMRDERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLR 774

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	455
d1kk8a2	789	Myosin S1, motor domain {Bay scallop (Aequipecten	97.41
d2mysa2	794	Myosin S1, motor domain {Chicken (Gallus gallus),	97.39
d2mysa2	794	Myosin S1, motor domain {Chicken (Gallus gallus),	96.73
d1kk8a2	789	Myosin S1, motor domain {Bay scallop (Aequipecten	96.21
d1w7ja2	730	Myosin S1, motor domain {Chicken (Gallus gallus),	91.39

>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=97.41  E-value=7.2e-05  Score=80.42  Aligned_cols=43  Identities=26%  Similarity=0.339  Sum_probs=36.7

Q ss_pred             HHHHHHHHHHHHhhHHHHHHHHHHH----HHHHHHHHHHHHHHHHHH
Q 012853           92 QEWAAIRIQTAFRGFLARRALRALK----GVVRLQALVRGRQVRKQA  134 (455)
Q Consensus        92 ee~AAI~IQsafRgylARR~~raLk----giVrLQAlvRG~lvRrq~  134 (455)
                      ...+|+.||++||||++|+.|+.++    +++.||..+||+++||.+
T Consensus       730 l~~~~~~IQ~~~R~~~~Rk~y~k~r~~~~ai~~iQ~~~R~~~~rr~~  776 (789)
T d1kk8a2         730 LSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNW  776 (789)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence            4678999999999999999997765    677888888888888765

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

Probab=97.39  E-value=9.5e-05  Score=79.51  Aligned_cols=43  Identities=28%  Similarity=0.239  Sum_probs=36.4

Q ss_pred             HHHHHHHHHHHHhhHHHHHHHHHH----HHHHHHHHHHHHHHHHHHH
Q 012853           92 QEWAAIRIQTAFRGFLARRALRAL----KGVVRLQALVRGRQVRKQA  134 (455)
Q Consensus        92 ee~AAI~IQsafRgylARR~~raL----kgiVrLQAlvRG~lvRrq~  134 (455)
                      ...+|+.||++||||++|+.|+.+    .+++.||+.+||+++||.+
T Consensus       734 l~~~~~~IQ~~~Rg~l~Rk~~~~~~~~r~a~~~IQ~~~R~~~~~r~~  780 (794)
T d2mysa2         734 LAEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVKHW  780 (794)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            457899999999999999999654    2888889999999888765

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

Probab=96.73  E-value=0.0013  Score=70.38  Aligned_cols=46  Identities=17%  Similarity=0.091  Sum_probs=40.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhh
Q 012853          116 KGVVRLQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSIE  161 (455)
Q Consensus       116 kgiVrLQAlvRG~lvRrq~~~tlr~~~AaVrIQa~vRg~raR~~~~  161 (455)
                      +.++.||+++||+++|+++...+....|++.||+.+|++++|+.+.
T Consensus       736 ~~~~~IQ~~~Rg~l~Rk~~~~~~~~r~a~~~IQ~~~R~~~~~r~~~  781 (794)
T d2mysa2         736 EIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVKHWP  781 (794)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH
Confidence            4788999999999999999766666789999999999999988753

>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=96.21  E-value=0.0046  Score=66.11  Aligned_cols=46  Identities=24%  Similarity=0.172  Sum_probs=38.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhh
Q 012853          116 KGVVRLQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSIE  161 (455)
Q Consensus       116 kgiVrLQAlvRG~lvRrq~~~tlr~~~AaVrIQa~vRg~raR~~~~  161 (455)
                      +.++.||+++||+++|+++........|++.||+.+|++.+|+.+.
T Consensus       732 ~~~~~IQ~~~R~~~~Rk~y~k~r~~~~ai~~iQ~~~R~~~~rr~~~  777 (789)
T d1kk8a2         732 KIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNWQ  777 (789)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccH
Confidence            4788999999999999999543334568899999999999998764

>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), Va isoform [TaxId: 9031]

Probab=91.39  E-value=0.073  Score=55.88  Aligned_cols=26  Identities=35%  Similarity=0.594  Sum_probs=21.0

Q ss_pred             HHHHHHHHHHHHHhhHHHHHHHHHHH
Q 012853           91 RQEWAAIRIQTAFRGFLARRALRALK  116 (455)
Q Consensus        91 ree~AAI~IQsafRgylARR~~raLk  116 (455)
                      +...+||+||++||||++||.|..+|
T Consensus       704 ~l~~~~~~iQ~~~R~~l~Rk~~~r~r  729 (730)
T d1w7ja2         704 KLRAACIRIQKTIRGWLMRKKYMRMR  729 (730)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            34568899999999999999987654