Citrus Sinensis ID: 012895
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 454 | 2.2.26 [Sep-21-2011] | |||||||
| Q8S340 | 434 | Purple acid phosphatase 2 | yes | no | 0.859 | 0.898 | 0.753 | 0.0 | |
| Q9LXI4 | 437 | Purple acid phosphatase 2 | no | no | 0.876 | 0.910 | 0.668 | 1e-163 | |
| Q9LJU7 | 437 | Purple acid phosphatase 1 | no | no | 0.911 | 0.947 | 0.581 | 1e-146 | |
| Q9LXI7 | 427 | Probable purple acid phos | no | no | 0.874 | 0.929 | 0.580 | 1e-138 | |
| Q949Y3 | 475 | Bifunctional purple acid | no | no | 0.821 | 0.785 | 0.433 | 2e-82 | |
| O23244 | 466 | Purple acid phosphatase 2 | no | no | 0.830 | 0.809 | 0.436 | 6e-80 | |
| Q9SFU3 | 532 | Purple acid phosphatase 1 | no | no | 0.779 | 0.665 | 0.4 | 9e-80 | |
| Q6TPH1 | 458 | Purple acid phosphatase 2 | no | no | 0.707 | 0.700 | 0.434 | 3e-79 | |
| Q9C510 | 466 | Purple acid phosphatase 6 | no | no | 0.834 | 0.813 | 0.425 | 8e-79 | |
| Q09131 | 464 | Purple acid phosphatase O | no | no | 0.799 | 0.782 | 0.439 | 3e-77 |
| >sp|Q8S340|PPA22_ARATH Purple acid phosphatase 22 OS=Arabidopsis thaliana GN=PAP22 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 640 bits (1650), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 294/390 (75%), Positives = 341/390 (87%)
Query: 36 RQPPRSVIQTPNKRSESDPQQVHISLAAKDYIRVSWITDDKEAESVVEYGKLPGRYNTVA 95
RQPPR ++ N RS+SDPQQVHISLA KD++RV++IT+D + ESVVEYGK PG+Y+ A
Sbjct: 29 RQPPRPIVFVHNDRSKSDPQQVHISLAGKDHMRVTFITEDNKVESVVEYGKQPGKYDGKA 88
Query: 96 TGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCGGRGPEFSFKMPPANFPIEFAIVGD 155
TGE TSY++FFYKSGKIHHVKIGPL+ TTYYYRCGG GPEFSFK PP+ FP+EFAIVGD
Sbjct: 89 TGECTSYKYFFYKSGKIHHVKIGPLQANTTYYYRCGGNGPEFSFKTPPSTFPVEFAIVGD 148
Query: 156 LGQTEWTNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGN 215
LGQTEWT +TL H+ S+DYDVFLLPGDLSYAD QPLWDSFGRLVEP AS RPWMVTEGN
Sbjct: 149 LGQTEWTAATLSHINSQDYDVFLLPGDLSYADTHQPLWDSFGRLVEPLASKRPWMVTEGN 208
Query: 216 HEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQ 275
HEIE PII FK+YNARWLMP+ ES S+SNLYYSFD+AG H +MLGSYTDFD +S Q
Sbjct: 209 HEIEFFPIIEHTTFKSYNARWLMPHTESFSTSNLYYSFDVAGVHTVMLGSYTDFDCESDQ 268
Query: 276 YKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAG 335
Y+WL+ADLAK++RK TPW+ VLLHAPWYNTN AH+GEGESMR +ME LL+NARVDVVF+G
Sbjct: 269 YQWLQADLAKVDRKTTPWVVVLLHAPWYNTNEAHEGEGESMREAMESLLFNARVDVVFSG 328
Query: 336 HVHAYERFTRIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQESSFGHARLK 395
HVHAYERF R+Y+NKADPCGPI+ITIGDGGNREGLAL FK+P SPLS F+ESSFGH RLK
Sbjct: 329 HVHAYERFKRVYNNKADPCGPIHITIGDGGNREGLALSFKKPPSPLSEFRESSFGHGRLK 388
Query: 396 ILDETRAHWSWYRNNDSDAVIADEVRLESL 425
++D RAHWSW+RNNDS++++ADEV L+SL
Sbjct: 389 VMDGKRAHWSWHRNNDSNSLLADEVWLDSL 418
|
Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 2 |
| >sp|Q9LXI4|PPA21_ARATH Purple acid phosphatase 21 OS=Arabidopsis thaliana GN=PAP21 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 575 bits (1482), Expect = e-163, Method: Compositional matrix adjust.
Identities = 266/398 (66%), Positives = 314/398 (78%)
Query: 34 YIRQPPRSVIQTPNKRSESDPQQVHISLAAKDYIRVSWITDDKEAESVVEYGKLPGRYNT 93
+ R PPR + + R + PQQVHISLA KD++RV++ TDD S+VEYGK P +Y+
Sbjct: 31 FTRPPPRPLFIVSHGRPKFYPQQVHISLAGKDHMRVTYTTDDLNVASMVEYGKHPKKYDK 90
Query: 94 VATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCGGRGPEFSFKMPPANFPIEFAIV 153
GE TSY +FFY SGKIHHVKIGPL+P T YYYRCGG G EFSFK PP+ FPIEFA+
Sbjct: 91 KTAGESTSYTYFFYNSGKIHHVKIGPLKPNTKYYYRCGGHGDEFSFKTPPSKFPIEFAVA 150
Query: 154 GDLGQTEWTNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTE 213
GDLGQT+WT TLD + +D+DVFLLPGDLSYAD QPLWDSFGRL+E AS+RPWMVTE
Sbjct: 151 GDLGQTDWTVRTLDQIRKRDFDVFLLPGDLSYADTHQPLWDSFGRLLETLASTRPWMVTE 210
Query: 214 GNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDS 273
GNHEIES P +FK+YNARWLMP+ ES S SNLYYSFD+AG H +MLGSYT ++ S
Sbjct: 211 GNHEIESFPTNDHISFKSYNARWLMPHAESLSHSNLYYSFDVAGVHTVMLGSYTPYESHS 270
Query: 274 AQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVF 333
QY WL+ADL K++RKKTPW+ V++H PWY+TN AH GEGE MR+++E LLY A+VDVVF
Sbjct: 271 DQYHWLQADLRKVDRKKTPWLVVVMHTPWYSTNKAHYGEGEKMRSALESLLYRAQVDVVF 330
Query: 334 AGHVHAYERFTRIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQESSFGHAR 393
AGHVH YERF IY+ KADPCGP+YITIGDGGNREGLAL FK+P+SPLS F+ESSFGH R
Sbjct: 331 AGHVHTYERFKPIYNKKADPCGPMYITIGDGGNREGLALRFKKPQSPLSEFRESSFGHGR 390
Query: 394 LKILDETRAHWSWYRNNDSDAVIADEVRLESLSTSKQC 431
L+I+D RAHWSW+RNND + IADEV ES TS C
Sbjct: 391 LRIIDHKRAHWSWHRNNDEMSSIADEVSFESPRTSSHC 428
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9LJU7|PPA18_ARATH Purple acid phosphatase 18 OS=Arabidopsis thaliana GN=PAP18 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 517 bits (1332), Expect = e-146, Method: Compositional matrix adjust.
Identities = 243/418 (58%), Positives = 308/418 (73%), Gaps = 4/418 (0%)
Query: 12 VLLTICCVPQIMPHSHVSAEEYYIRQPPRSVIQTP-NKRSESDPQQVHISLAAKDYIRVS 70
+LL + I+ S +A + Y+R PR +Q P ++S S P+QVHISLA ++RV+
Sbjct: 6 ILLLVTLSVSIIFTS--AAADDYVRPKPRETLQFPWKQKSSSVPEQVHISLAGDKHMRVT 63
Query: 71 WITDDKEAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRC 130
W+T+DK + S VEYG PG+Y+ + GE TSY + Y+SGKIHH IGPLE T YYYRC
Sbjct: 64 WVTNDKSSPSFVEYGTSPGKYSYLGQGESTSYSYIMYRSGKIHHTVIGPLEADTVYYYRC 123
Query: 131 GGRGPEFSFKMPPANFPIEFAIVGDLGQTEWTNSTLDHVGSKDYDVFLLPGDLSYADFQQ 190
GG GPEF K PPA FPI FA+ GDLGQT WT STLDH+ Y V LLPGDLSYAD+ Q
Sbjct: 124 GGEGPEFHLKTPPAQFPITFAVAGDLGQTGWTKSTLDHIDQCKYAVHLLPGDLSYADYMQ 183
Query: 191 PLWDSFGRLVEPYASSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLY 250
WD+FG LV+P AS RPWMVT+GNHE ESIP I+ F ++N+RW MPYEESGS+SNLY
Sbjct: 184 HKWDTFGELVQPLASVRPWMVTQGNHEKESIPFIV-DEFVSFNSRWKMPYEESGSNSNLY 242
Query: 251 YSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQ 310
YSF++AG H IMLGSYTD+D S QY WLKADL+K++R++TPW+ VL H PWYN+N AHQ
Sbjct: 243 YSFEVAGVHAIMLGSYTDYDRYSDQYSWLKADLSKVDRERTPWLIVLFHVPWYNSNNAHQ 302
Query: 311 GEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGGNREGL 370
EG+ M ME LLY + VD+VF GHVHAYER R+ + K+DPCGP++ITIGDGGNREGL
Sbjct: 303 HEGDEMMAEMEPLLYASGVDIVFTGHVHAYERTKRVNNGKSDPCGPVHITIGDGGNREGL 362
Query: 371 ALEFKEPKSPLSMFQESSFGHARLKILDETRAHWSWYRNNDSDAVIADEVRLESLSTS 428
A ++K+P S+F+E+SFGH L++++ T A W+W+RN+D + +DEV L SL S
Sbjct: 363 ARKYKDPSPEWSVFREASFGHGELQMVNSTHALWTWHRNDDDEPTRSDEVWLNSLVNS 420
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9LXI7|PPA20_ARATH Probable purple acid phosphatase 20 OS=Arabidopsis thaliana GN=PAP20 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 491 bits (1263), Expect = e-138, Method: Compositional matrix adjust.
Identities = 235/405 (58%), Positives = 295/405 (72%), Gaps = 8/405 (1%)
Query: 34 YIRQPPRS--VIQTPNKRSESDPQQVHISLAAKDYIRVSWITDDKEAESVVEYGKLPGRY 91
Y RQ R VI N+ + P QVHISL D +R+SWIT + SVV YG + G+Y
Sbjct: 22 YDRQGTRKNLVIHPTNEDDPTFPDQVHISLVGPDKMRISWITQSSISPSVV-YGTVSGKY 80
Query: 92 NTVATGEHTSYQFFF-YKSGKIHHVKIGPLEPATTYYYRCGG--RGPEFSFKMPPANFPI 148
A G +SY + Y+SG+I+ V IGPL+P T YYY+CGG EFSF+ PP+ FPI
Sbjct: 81 EGSANGTSSSYHYLLIYRSGQINDVVIGPLKPNTVYYYKCGGPSSTQEFSFRTPPSKFPI 140
Query: 149 EFAIVGDLGQTEWTNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRP 208
+FA+ GDLG +EW+ STL+HV DYDVF+LPGDLSYA+ QPLWD+FGRLV+P AS RP
Sbjct: 141 KFAVSGDLGTSEWSKSTLEHVSKWDYDVFILPGDLSYANMYQPLWDTFGRLVQPLASQRP 200
Query: 209 WMVTEGNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTD 268
WMVT GNHE+E IPI+ + F AYN RW MP+EESGSSSNLYYSF++ G HIIMLGSYTD
Sbjct: 201 WMVTHGNHELEKIPILHSNPFTAYNKRWRMPFEESGSSSNLYYSFNVYGVHIIMLGSYTD 260
Query: 269 FDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGES--MRNSMEELLYN 326
F+ S QY+WL+ +L KI+RK TPW+ ++HAPWYN+N AHQGE ES M+ SME LLY
Sbjct: 261 FEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQGEKESVEMKESMETLLYK 320
Query: 327 ARVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQE 386
ARVD+VFAGHVHAYERF+R+Y +K D CGP+YI IGDGGN EGLA ++++P +S+F+E
Sbjct: 321 ARVDLVFAGHVHAYERFSRVYQDKFDKCGPVYINIGDGGNLEGLATKYRDPNPEISLFRE 380
Query: 387 SSFGHARLKILDETRAHWSWYRNNDSDAVIADEVRLESLSTSKQC 431
+SFGH +L + + T A W W+RN+D +V D V L SL C
Sbjct: 381 ASFGHGQLVVENATHARWEWHRNDDDVSVEKDSVWLTSLLADSSC 425
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q949Y3|PPA26_ARATH Bifunctional purple acid phosphatase 26 OS=Arabidopsis thaliana GN=PAP26 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 306 bits (785), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 176/406 (43%), Positives = 236/406 (58%), Gaps = 33/406 (8%)
Query: 54 PQQVHISLAAKD--YIRVSWITDDKEAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGK 111
PQQVHI+ D + +SW+T D+ S V YG + G+Y VA G + +Y F+ YKSG
Sbjct: 54 PQQVHITQGDYDGKAVIISWVTPDEPGSSQVHYGAVQGKYEFVAQGTYHNYTFYKYKSGF 113
Query: 112 IHHVKIGPLEPATTYYYRC--GGRGPEFSFKMPPANFP---IEFAIVGDLGQTEWTNSTL 166
IHH + LE T YYY+ G EF F PP P +F I+GD+GQT + STL
Sbjct: 114 IHHCLVSDLEHDTKYYYKIESGESSREFWFVTPPHVHPDASYKFGIIGDMGQTFNSLSTL 173
Query: 167 DHVGSKDYDVFLLPGDLSYADFQQ-----PLWDSFGRLVEPYASSRPWMVTEGNHEIESI 221
+H L GDLSYAD Q WDS+GR VE + +PW+ + GNHE++ +
Sbjct: 174 EHYMESGAQAVLFLGDLSYADRYQYNDVGVRWDSWGRFVERSTAYQPWLWSAGNHEVDYM 233
Query: 222 PI---ILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKW 278
P + P F+ Y R+ PY S SSS L+Y+ A AHII+L SY+ F + + Q+ W
Sbjct: 234 PYMGEVTP--FRNYLQRYTTPYLASKSSSPLWYAVRRASAHIIVLSSYSPFVKYTPQWHW 291
Query: 279 LKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVH 338
L +L +++R+KTPW+ VL+H P YN+N AH EGESMR + EE +VDV+FAGHVH
Sbjct: 292 LSEELTRVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFEEWFVQHKVDVIFAGHVH 351
Query: 339 AYERFTRIYDNK-----------ADPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQES 387
AYER RI + + D P+YIT+GDGGN+EGLA F EP+ S F+E+
Sbjct: 352 AYERSYRISNVRYNVSSGDRYPVPDKSAPVYITVGDGGNQEGLAGRFTEPQPDYSAFREA 411
Query: 388 SFGHARLKILDETRAHWSWYRNNDSDAVIADEVRLESLSTSKQCWG 433
S+GH+ L I + T A + W RN+D V DE L + Q WG
Sbjct: 412 SYGHSTLDIKNRTHAIYHWNRNDDGKKVATDEFVLHN-----QYWG 452
|
Metallo-phosphoesterase involved in phosphate metabolism. Acid phosphatase activity with phosphoenolpyruvate, inorganic pyrophosphate, phenyl-phosphate and p-nitrophenyl-phosphate as the most effective substrates. No activity with phytic acid, phosphocholine or bis-p-nitrophenyl-phosphate. Has a peroxidase activity at alkaline pH. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: 1 EC: . EC: 1 EC: . EC: 7 |
| >sp|O23244|PPA25_ARATH Purple acid phosphatase 25 OS=Arabidopsis thaliana GN=PAP25 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 298 bits (763), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 179/410 (43%), Positives = 241/410 (58%), Gaps = 33/410 (8%)
Query: 46 PNKRSESDPQQVHISLAAKDY----IRVSWITDDKEAES-VVEYGK-LPGRYNTVATGEH 99
P+ + P+QVHI DY I +SW+T A S VV Y K + G H
Sbjct: 43 PSPAGHNAPEQVHI--VQGDYNGRGIIISWVTPLNLAGSNVVTYWKAVDGDVKPKKKRGH 100
Query: 100 ---TSYQFFFYKSGKIHHVKIGPLEPATTYYYRCGGRGP--EFSFKMPPA---NFPIEFA 151
+SY+F+ Y SG +HH I LE T Y Y G G +FSF PP + P F
Sbjct: 101 ASTSSYRFYDYTSGFLHHATIKGLEYDTKYIYEVGTDGSVRQFSFTSPPKVGPDVPYTFG 160
Query: 152 IVGDLGQTEWTNSTLDHVGSK-DYDVFLLPGDLSYAD----FQQPLWDSFGRLVEPYASS 206
I+GDLGQT +N TL H S L PGDLSYAD Q WDS+GR VEP A+
Sbjct: 161 IIGDLGQTLASNETLYHYMSNPKGQAVLFPGDLSYADDHPNHDQRKWDSWGRFVEPCAAY 220
Query: 207 RPWMVTEGNHEIESIPII-LPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGS 265
+ ++ GNHEI+ +P I PHAFK Y R+ Y+ S S S L+YS A AHII+L S
Sbjct: 221 QTFIYAAGNHEIDFVPNIGEPHAFKPYIHRYHNAYKASKSISPLWYSIRRASAHIIVLSS 280
Query: 266 YTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLY 325
Y+ + + + QY WL+ +L K+NR++TPW+ V++H+PWYN+N H EGESMR E
Sbjct: 281 YSAYGKYTPQYVWLEQELKKVNREETPWLIVMVHSPWYNSNNYHYMEGESMRAMFESWFV 340
Query: 326 NARVDVVFAGHVHAYERFTRIYDNK-----------ADPCGPIYITIGDGGNREGLALEF 374
N++VD+V +GHVH+YER R+ + K DP PIYITIGDGGN EG+A F
Sbjct: 341 NSKVDLVLSGHVHSYERSERVSNIKYNITNGLSYPVKDPSAPIYITIGDGGNIEGIANSF 400
Query: 375 KEPKSPLSMFQESSFGHARLKILDETRAHWSWYRNNDSDAVIADEVRLES 424
+P+ S ++E+SFGHA L+I + T A+++W+RN D++ V AD + L +
Sbjct: 401 TDPQPSYSAYREASFGHAVLEIYNRTHAYYTWHRNQDNEPVAADSIMLHN 450
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9SFU3|PPA15_ARATH Purple acid phosphatase 15 OS=Arabidopsis thaliana GN=PAP15 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 298 bits (762), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 176/440 (40%), Positives = 232/440 (52%), Gaps = 86/440 (19%)
Query: 67 IRVSWIT------------DDKEAESVVEYGKLPGRYNTVATGEHTSYQFFF-------Y 107
I VSWIT D SVV++G L + A G Y + Y
Sbjct: 78 IWVSWITGEFQIGKKVKPLDPTSINSVVQFGTLRHSLSHEAKGHSLVYSQLYPFDGLLNY 137
Query: 108 KSGKIHHVKIGPLEPATTYYYRCGGRGPEFSFK------MP---PANFPIEFAIVGDLGQ 158
SG IHHV+I L+P+T YYYRCG K MP P+++P A+VGDLG
Sbjct: 138 TSGIIHHVRITGLKPSTIYYYRCGDPSRRAMSKIHHFRTMPVSSPSSYPGRIAVVGDLGL 197
Query: 159 TEWTNSTLDHVGSKDYDVFLLPGDLSYADFQ-----------------------QPLWDS 195
T T T+ H+ D+ LL GD+SYA+ QP WD
Sbjct: 198 TYNTTDTISHLIHNSPDLILLIGDVSYANLYLTNGTSSDCYSCSFPETPIHETYQPRWDY 257
Query: 196 FGRLVEPYASSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDI 255
+GR +E S P MV EGNHEIE F+AY++R+ P+ ESGSSS LYYSF+
Sbjct: 258 WGRFMENLTSKVPLMVIEGNHEIELQ--AENKTFEAYSSRFAFPFNESGSSSTLYYSFNA 315
Query: 256 AGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGES 315
G H +MLG+Y +D+ + QY+WLK DLAK++R TPW+ H PWY++ TAH E E
Sbjct: 316 GGIHFVMLGAYIAYDKSAEQYEWLKKDLAKVDRSVTPWLVASWHPPWYSSYTAHYREAEC 375
Query: 316 MRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGGNREGLALEFK 375
M+ +MEELLY+ D+VF GHVHAYER R+Y+ + DPCGP+YI IGDGGNRE +A+E
Sbjct: 376 MKEAMEELLYSYGTDIVFNGHVHAYERSNRVYNYELDPCGPVYIVIGDGGNREKMAIEHA 435
Query: 376 EP--KSP-------------------------------LSMFQESSFGHARLKILDETRA 402
+ K P S +ESSFGH L++ +ET A
Sbjct: 436 DDPGKCPEPLTTPDPVMGGFCAWNFTPSDKFCWDRQPDYSALRESSFGHGILEMKNETWA 495
Query: 403 HWSWYRNNDSDAVIADEVRL 422
W+WYRN DS + + D++ +
Sbjct: 496 LWTWYRNQDSSSEVGDQIYI 515
|
Acid phosphatase activity with p-nitrophenyl phosphate (pNPP), D-myoinositol 1-phosphate (Ins(1)P1), phytic acid and Myo-inositol hexakisphosphate. Low or no activity with Glc-6-P and ATP. Confers shoot growth stimulation, enhanced salt and osmotic stress tolerance, and ABA insensitivity. May modulate ascorbic acid (AsA) levels by controlling the input of myoinositol into this branch of AsA biosynthesis. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q6TPH1|PPA23_ARATH Purple acid phosphatase 23 OS=Arabidopsis thaliana GN=PAP23 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 296 bits (757), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 163/375 (43%), Positives = 208/375 (55%), Gaps = 54/375 (14%)
Query: 54 PQQVHISLAAKDYIRVSWITDD------------KEAESVVEYGKLPGRYNTVATGEHTS 101
P+Q+ ++L+ + VSW+T D S V YGK G Y G T
Sbjct: 65 PEQIALALSTPTSMWVSWVTGDAIVGKDVKPLDPSSIASEVWYGKEKGNYMLKKKGNATV 124
Query: 102 YQFFF-------YKSGKIHHVKIGPLEPATTYYYRCG-----GRGPEFSFKMPPA----N 145
Y + Y SG IHHV I LEP T YYYRCG E SF+ P
Sbjct: 125 YSQLYPSDGLLNYTSGIIHHVLIDGLEPETRYYYRCGDSSVPAMSEEISFETLPLPSKDA 184
Query: 146 FPIEFAIVGDLGQTEWTNSTLDHVGSKDYDVFLLPGDLSYAD------------------ 187
+P A VGDLG T T +T+DH+ D + ++ GDL+YA+
Sbjct: 185 YPHRIAFVGDLGLTSNTTTTIDHLMENDPSLVIIVGDLTYANQYRTIGGKGVPCFSCSFP 244
Query: 188 ------FQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYE 241
QP WD++GR +EP S P MV EGNHEIE P FK+Y+ R+ +P
Sbjct: 245 DAPIRETYQPRWDAWGRFMEPLTSKVPTMVIEGNHEIE--PQASGITFKSYSERFAVPAS 302
Query: 242 ESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLHAP 301
ESGS+SNLYYSFD G H +MLG+Y D++ QY WLK DL+K++R TPW+ +H P
Sbjct: 303 ESGSNSNLYYSFDAGGVHFVMLGAYVDYNNTGLQYAWLKEDLSKVDRAVTPWLVATMHPP 362
Query: 302 WYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYITI 361
WYN+ ++H E E MR MEELLY RVD+VFAGHVHAYER RIY+ DPCGP+YITI
Sbjct: 363 WYNSYSSHYQEFECMRQEMEELLYQYRVDIVFAGHVHAYERMNRIYNYTLDPCGPVYITI 422
Query: 362 GDGGNREGLALEFKE 376
GDGGN E + ++F +
Sbjct: 423 GDGGNIEKVDVDFAD 437
|
Acid phosphatase activity with ATP, ADP, dATP, pyrophosphate, polyphosphate, phosphoserine and phosphothreonine. Low or no activity with phosphotyrosine, AMP and phytate. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9C510|PPA6_ARATH Purple acid phosphatase 6 OS=Arabidopsis thaliana GN=PAP6 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 294 bits (753), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 174/409 (42%), Positives = 239/409 (58%), Gaps = 30/409 (7%)
Query: 46 PNKRSESDPQQVHISLAAKDY--IRVSWITDDKEAES-VVEY-----GKLPGRYNTVATG 97
P+ + P+QVH++ D + VSW+T A S VV Y G A
Sbjct: 42 PSPGGYNTPEQVHLTQGDHDGRGMIVSWVTPLNLAGSNVVTYWIATNGSDVKPAKKRAHA 101
Query: 98 EHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCGGRGP--EFSFKMPPA---NFPIEFAI 152
SY+F+ Y SG +HH I LE T Y Y G +FSF PP + P F I
Sbjct: 102 STKSYRFYDYSSGFLHHATIKGLEYDTKYIYEVGTDKSVRQFSFTTPPKIGPDVPYTFGI 161
Query: 153 VGDLGQTEWTNSTLDH-VGSKDYDVFLLPGDLSYAD----FQQPLWDSFGRLVEPYASSR 207
+GDLGQT +N TL H + + L GDLSYAD Q WD++GR +EP A+ +
Sbjct: 162 IGDLGQTYASNETLYHYMSNPKGQAVLFAGDLSYADDHPNHDQRKWDTWGRFMEPCAAYQ 221
Query: 208 PWMVTEGNHEIESIPII-LPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSY 266
P++ GNHEI+ +P I PHAFK Y R+ Y+ S S+S L+YS A AHII+L SY
Sbjct: 222 PFIFAAGNHEIDFVPNIGEPHAFKPYTHRYPNAYKASQSTSPLWYSVRRASAHIIVLSSY 281
Query: 267 TDFDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYN 326
+ + + + QY WL+ +L +NR++TPW+ V++H+PWYN+N H EGESMR E L N
Sbjct: 282 SAYGKYTPQYIWLEQELKNVNREETPWLIVIVHSPWYNSNNYHYMEGESMRVMFESWLVN 341
Query: 327 ARVDVVFAGHVHAYERFTRIYDNK-----------ADPCGPIYITIGDGGNREGLALEFK 375
++VD+V +GHVHAYER RI + K DP PIYITIGDGGN EG+A F
Sbjct: 342 SKVDLVLSGHVHAYERSERISNIKYNITNGLSSPVKDPNAPIYITIGDGGNIEGIANSFV 401
Query: 376 EPKSPLSMFQESSFGHARLKILDETRAHWSWYRNNDSDAVIADEVRLES 424
+P+ S ++E+SFGHA L+I++ T A ++W+RN D++ V AD + L +
Sbjct: 402 DPQPSYSAYREASFGHAVLEIMNRTHAQYTWHRNQDNEPVAADSIMLHN 450
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q09131|PPAF_SOYBN Purple acid phosphatase OS=Glycine max GN=PAP PE=1 SV=2 | Back alignment and function description |
|---|
Score = 289 bits (739), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 174/396 (43%), Positives = 223/396 (56%), Gaps = 33/396 (8%)
Query: 54 PQQVHIS---LAAKDYIRVSWITDDKEAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSG 110
PQQVHI+ L K I VSW+T D+ S V Y +A G+ +Y+FF Y SG
Sbjct: 54 PQQVHITQGDLVGKAVI-VSWVTVDEPGSSEVHYWSENSDKKKIAEGKLVTYRFFNYSSG 112
Query: 111 KIHHVKIGPLEPATTYYYRCG--GRGPEFSFKMPPA---NFPIEFAIVGDLGQTEWTNST 165
IHH I LE T YYY G +F F PP + P F ++GDLGQ+ +N T
Sbjct: 113 FIHHTTIRNLEYKTKYYYEVGLGNTTRQFWFVTPPEIGPDVPYTFGLIGDLGQSFDSNKT 172
Query: 166 LDH--VGSKDYDVFLLPGDLSYAD----FQQPLWDSFGRLVEPYASSRPWMVTEGNHEIE 219
L H + + L GDLSYAD WDS+GR E + +PW+ T GNHE
Sbjct: 173 LSHYELNPRKGQTVLFVGDLSYADNYPNHDNIRWDSWGRFTERSVAYQPWIWTAGNHENH 232
Query: 220 SIPII---LPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQY 276
P I +P FK Y R+ +PY+ S S+S +YS A AHII+L SY+ + + + QY
Sbjct: 233 FAPEIGETVP--FKPYTHRYHVPYKASQSTSPFWYSIKRASAHIIVLASYSAYGKYTPQY 290
Query: 277 KWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGH 336
KWL+ +L K+NR +TPW+ VL+H+PWYN+ H EGE+MR E +VDVVFAGH
Sbjct: 291 KWLEKELPKVNRTETPWLIVLMHSPWYNSYNYHYMEGETMRVMYEPWFVQYKVDVVFAGH 350
Query: 337 VHAYERFTRIYDNKA------------DPCGPIYITIGDGGNREGLALEFKEPKSPLSMF 384
VHAYER R+ N A D P+YITIGDGG EGLA EP+ S F
Sbjct: 351 VHAYERSERV-SNVAYNIVNGLCAPVNDKSAPVYITIGDGGTLEGLATNMTEPQPKYSAF 409
Query: 385 QESSFGHARLKILDETRAHWSWYRNNDSDAVIADEV 420
+E+SFGHA I + T AH+SW+RN D AV AD +
Sbjct: 410 REASFGHAIFDITNRTHAHYSWHRNQDGVAVEADSL 445
|
Glycine max (taxid: 3847) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 454 | ||||||
| 356537091 | 437 | PREDICTED: purple acid phosphatase 22-li | 0.878 | 0.913 | 0.751 | 0.0 | |
| 224134458 | 446 | predicted protein [Populus trichocarpa] | 0.922 | 0.939 | 0.735 | 0.0 | |
| 356570845 | 468 | PREDICTED: purple acid phosphatase 22-li | 0.889 | 0.863 | 0.740 | 0.0 | |
| 297740097 | 523 | unnamed protein product [Vitis vinifera] | 0.984 | 0.854 | 0.679 | 0.0 | |
| 225440924 | 449 | PREDICTED: purple acid phosphatase 22 [V | 0.984 | 0.995 | 0.679 | 0.0 | |
| 357511011 | 444 | Purple acid phosphatase [Medicago trunca | 0.933 | 0.954 | 0.697 | 0.0 | |
| 22331756 | 434 | purple acid phosphatase 22 [Arabidopsis | 0.859 | 0.898 | 0.753 | 0.0 | |
| 297820012 | 435 | ATPAP22/PAP22 [Arabidopsis lyrata subsp. | 0.859 | 0.896 | 0.743 | 1e-178 | |
| 7669956 | 426 | purple acid phosphatase-like protein [Ar | 0.841 | 0.896 | 0.735 | 1e-175 | |
| 356505350 | 379 | PREDICTED: purple acid phosphatase 22-li | 0.828 | 0.992 | 0.747 | 1e-171 |
| >gi|356537091|ref|XP_003537064.1| PREDICTED: purple acid phosphatase 22-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 300/399 (75%), Positives = 339/399 (84%)
Query: 34 YIRQPPRSVIQTPNKRSESDPQQVHISLAAKDYIRVSWITDDKEAESVVEYGKLPGRYNT 93
+ RQP R +I TP+KRS+SDPQQVHISL D++RVSWITDDK +ESVVEYG G Y+T
Sbjct: 27 FSRQPSRQLIFTPHKRSDSDPQQVHISLVGNDHMRVSWITDDKHSESVVEYGTKKGEYST 86
Query: 94 VATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCGGRGPEFSFKMPPANFPIEFAIV 153
ATGEHTSY +F Y+SGKIHHV IGPL+P T YYYRCGG G EFSFK PP PIEF +V
Sbjct: 87 KATGEHTSYHYFLYESGKIHHVVIGPLQPNTIYYYRCGGSGSEFSFKTPPLKLPIEFVVV 146
Query: 154 GDLGQTEWTNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTE 213
GDLGQTEWT STL HV SKDYDVFLLPGDLSYAD QPLWDSFGRLVEPYAS PWMVTE
Sbjct: 147 GDLGQTEWTTSTLKHVDSKDYDVFLLPGDLSYADTHQPLWDSFGRLVEPYASRIPWMVTE 206
Query: 214 GNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDS 273
GNHEIE+ PII P+ FKAYNARW MPY+ESGS+SNLYYSFD+A H+IMLGSYTDFD S
Sbjct: 207 GNHEIETFPIIQPNGFKAYNARWPMPYKESGSTSNLYYSFDVASTHVIMLGSYTDFDAHS 266
Query: 274 AQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVF 333
QY WL++DLAKI+RK+TPW+ LLHAPWYNTN AHQGEGE MR +MEELLY ARVD+VF
Sbjct: 267 QQYTWLQSDLAKIDRKRTPWVIALLHAPWYNTNEAHQGEGEDMRQAMEELLYEARVDLVF 326
Query: 334 AGHVHAYERFTRIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQESSFGHAR 393
AGHVHAYERFTRIYDNKAD CGP+Y+TIGDGGNREGLAL FK+P SPLS+++E SFGH R
Sbjct: 327 AGHVHAYERFTRIYDNKADSCGPLYVTIGDGGNREGLALSFKKPPSPLSLYREPSFGHGR 386
Query: 394 LKILDETRAHWSWYRNNDSDAVIADEVRLESLSTSKQCW 432
L+I++ET A+WSW+RNND+D +AD V +ESLS SK CW
Sbjct: 387 LRIVNETHAYWSWHRNNDTDTFVADGVWIESLSNSKACW 425
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224134458|ref|XP_002327410.1| predicted protein [Populus trichocarpa] gi|222835964|gb|EEE74385.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 653 bits (1684), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/419 (73%), Positives = 348/419 (83%)
Query: 21 QIMPHSHVSAEEYYIRQPPRSVIQTPNKRSESDPQQVHISLAAKDYIRVSWITDDKEAES 80
Q + S +E Y R P R++I T + ES+ QQVH+SL +D++RV+WITDDK A S
Sbjct: 18 QFTSQCYASKDESYSRPPARNIIFTAHHGLESEAQQVHVSLVGRDHMRVTWITDDKHAPS 77
Query: 81 VVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCGGRGPEFSFK 140
VEYGK PG YN +ATG+HTSY++FFY SGKIHHVKIGPLEP TTYYYRCGG GPE SFK
Sbjct: 78 TVEYGKQPGTYNAMATGDHTSYRYFFYSSGKIHHVKIGPLEPGTTYYYRCGGSGPELSFK 137
Query: 141 MPPANFPIEFAIVGDLGQTEWTNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLV 200
PPA P+EF ++GDLGQT WTNSTL HV S+DYDV LLPGDLSYAD QPLWDSFGRLV
Sbjct: 138 TPPATLPLEFVVIGDLGQTGWTNSTLAHVNSRDYDVLLLPGDLSYADTNQPLWDSFGRLV 197
Query: 201 EPYASSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHI 260
E YAS RPWMVTEGNHE E PII PH FKAYNARWLMPYEES SSSNLYYSF++ G H+
Sbjct: 198 EKYASQRPWMVTEGNHETEIFPIIQPHGFKAYNARWLMPYEESNSSSNLYYSFNVVGTHV 257
Query: 261 IMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSM 320
IMLGSYTDFDE S QYKWL+ADL I+RKKTPW+ VLLHAPWYNTN AHQGEGESMR +M
Sbjct: 258 IMLGSYTDFDEHSQQYKWLEADLGSIDRKKTPWVIVLLHAPWYNTNNAHQGEGESMRKAM 317
Query: 321 EELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSP 380
EELLY ARVDVVFAGHVHAYERF RIYDNK DPCGP+YITIGDGGNREGLAL F+ P SP
Sbjct: 318 EELLYKARVDVVFAGHVHAYERFARIYDNKVDPCGPVYITIGDGGNREGLALTFQNPASP 377
Query: 381 LSMFQESSFGHARLKILDETRAHWSWYRNNDSDAVIADEVRLESLSTSKQCWGITDGQE 439
LS+++E+SFGH RL+I+DETRAHWSW+RNNDS++ ADEV L+S+STS CW I D +E
Sbjct: 378 LSLYREASFGHGRLRIMDETRAHWSWHRNNDSNSFSADEVWLDSISTSTACWAIDDEKE 436
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356570845|ref|XP_003553594.1| PREDICTED: purple acid phosphatase 22-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 299/404 (74%), Positives = 342/404 (84%)
Query: 28 VSAEEYYIRQPPRSVIQTPNKRSESDPQQVHISLAAKDYIRVSWITDDKEAESVVEYGKL 87
+S E ++RQP +I TP+ RS SDPQQVHISL ++ +RVSWIT+DK AESVVEYG
Sbjct: 51 LSQENNFVRQPAAQLIITPHHRSHSDPQQVHISLVGQEKMRVSWITEDKHAESVVEYGTK 110
Query: 88 PGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCGGRGPEFSFKMPPANFP 147
G Y+ ATG +TSYQ+FFY SGKIH+V IGPL+P +TY+YRCGG GPEFSFK PP P
Sbjct: 111 AGEYSAKATGVYTSYQYFFYNSGKIHNVVIGPLQPGSTYFYRCGGSGPEFSFKTPPPRCP 170
Query: 148 IEFAIVGDLGQTEWTNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSR 207
IEF IVGDLGQTEWT STL H+ S DYDVFLLPGDLSYAD QQPLWDSFGRLVEPYAS R
Sbjct: 171 IEFVIVGDLGQTEWTASTLKHIDSSDYDVFLLPGDLSYADSQQPLWDSFGRLVEPYASKR 230
Query: 208 PWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYT 267
PWMVTEGNHEIE PII P F+AYNARW MP+++SGS+SNLYYSF++AG H+IMLGSYT
Sbjct: 231 PWMVTEGNHEIEIFPIIYPQGFQAYNARWPMPFQQSGSTSNLYYSFEVAGTHVIMLGSYT 290
Query: 268 DFDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNA 327
DFD S QY WL++DLA I+R KTPW+ VLLHAPWYNTN AHQGEGESMR +MEELLY A
Sbjct: 291 DFDSQSLQYTWLQSDLANIDRVKTPWVIVLLHAPWYNTNEAHQGEGESMRQAMEELLYEA 350
Query: 328 RVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQES 387
RVD+VFAGHVHAYERFTRIYDNKAD CGP+Y+TIGDGGNREGLAL FK P SPLS+++E
Sbjct: 351 RVDLVFAGHVHAYERFTRIYDNKADSCGPMYVTIGDGGNREGLALMFKNPSSPLSLYREP 410
Query: 388 SFGHARLKILDETRAHWSWYRNNDSDAVIADEVRLESLSTSKQC 431
SFGH RL+IL+ET AHWSW+RNND+DAV+AD V +ESLS+SK C
Sbjct: 411 SFGHGRLRILNETHAHWSWHRNNDADAVVADGVWIESLSSSKAC 454
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297740097|emb|CBI30279.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/456 (67%), Positives = 366/456 (80%), Gaps = 9/456 (1%)
Query: 1 MAKLWSPAAFRVLLTICCVPQIMPHSHVSAEEYYIRQPPRSVIQTPNKRSESDPQQVHIS 60
M K W +F LLTI Q +P SH S++ Y RQPPR +I TP+ RS+SDPQQVHIS
Sbjct: 75 MEKSWLTVSFH-LLTILSSIQ-LPRSHASSD--YSRQPPRRLIFTPHHRSDSDPQQVHIS 130
Query: 61 LAAKDYIRVSWITDDKEAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPL 120
L +D ++VSWITDDK A S+VEYGK+PG+Y ATGEHTSY +FFY SGKIHHV+IGPL
Sbjct: 131 LVGRDRMKVSWITDDKSARSIVEYGKMPGKYEASATGEHTSYNYFFYSSGKIHHVEIGPL 190
Query: 121 EPATTYYYRCGGRGPEFSFKMPPANFPIEFAIVGDLGQTEWTNSTLDHVGSKDYDVFLLP 180
E T YYYRCGG G EF FK PP++FPIEFA+VGDLGQTEWT STL HV +YDV LLP
Sbjct: 191 EAGTVYYYRCGGSGQEFYFKTPPSSFPIEFAVVGDLGQTEWTASTLTHVNRTNYDVLLLP 250
Query: 181 GDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPY 240
GDLSYAD QPLWD FGRLVEPYAS RPWMVTEGNHEIE PII P FKA+N+RW MP+
Sbjct: 251 GDLSYADSHQPLWDCFGRLVEPYASHRPWMVTEGNHEIEIFPIIYPDGFKAFNSRWPMPF 310
Query: 241 EESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLHA 300
+ESGS+SNLYYSF++AG H+IMLGSY +FDE SAQYKWLK DL K++R++TPW+ VL+HA
Sbjct: 311 QESGSTSNLYYSFEVAGCHVIMLGSYAEFDEKSAQYKWLKGDLGKVDRRRTPWLIVLIHA 370
Query: 301 PWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYIT 360
PWYNTN AH+GEGESMR +ME+LLY ARVDVVFAGHVHAYERFTR+Y NKAD CGPI++T
Sbjct: 371 PWYNTNLAHKGEGESMRKAMEKLLYEARVDVVFAGHVHAYERFTRVYKNKADECGPIHVT 430
Query: 361 IGDGGNREGLALEFKEPKSP-LSMFQESSFGHARLKILDETRAHWSWYRNNDSDAVIADE 419
IGDGGNREGLAL F++P S LS+++E SFGH RL+IL++T A WSW+RNNDSD ++AD
Sbjct: 431 IGDGGNREGLALTFEKPTSASLSVYREPSFGHGRLRILNQTHAFWSWHRNNDSDCILADS 490
Query: 420 VRLESLSTSKQCWGITDGQESSSSSSSSSVT-KDEL 454
+ L+SLS S+QC T Q+ +S SV DEL
Sbjct: 491 LWLQSLSVSRQC---TQFQQDQASLPLVSVNLNDEL 523
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225440924|ref|XP_002276940.1| PREDICTED: purple acid phosphatase 22 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/456 (67%), Positives = 366/456 (80%), Gaps = 9/456 (1%)
Query: 1 MAKLWSPAAFRVLLTICCVPQIMPHSHVSAEEYYIRQPPRSVIQTPNKRSESDPQQVHIS 60
M K W +F LLTI Q +P SH S++ Y RQPPR +I TP+ RS+SDPQQVHIS
Sbjct: 1 MEKSWLTVSFH-LLTILSSIQ-LPRSHASSD--YSRQPPRRLIFTPHHRSDSDPQQVHIS 56
Query: 61 LAAKDYIRVSWITDDKEAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPL 120
L +D ++VSWITDDK A S+VEYGK+PG+Y ATGEHTSY +FFY SGKIHHV+IGPL
Sbjct: 57 LVGRDRMKVSWITDDKSARSIVEYGKMPGKYEASATGEHTSYNYFFYSSGKIHHVEIGPL 116
Query: 121 EPATTYYYRCGGRGPEFSFKMPPANFPIEFAIVGDLGQTEWTNSTLDHVGSKDYDVFLLP 180
E T YYYRCGG G EF FK PP++FPIEFA+VGDLGQTEWT STL HV +YDV LLP
Sbjct: 117 EAGTVYYYRCGGSGQEFYFKTPPSSFPIEFAVVGDLGQTEWTASTLTHVNRTNYDVLLLP 176
Query: 181 GDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPY 240
GDLSYAD QPLWD FGRLVEPYAS RPWMVTEGNHEIE PII P FKA+N+RW MP+
Sbjct: 177 GDLSYADSHQPLWDCFGRLVEPYASHRPWMVTEGNHEIEIFPIIYPDGFKAFNSRWPMPF 236
Query: 241 EESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLHA 300
+ESGS+SNLYYSF++AG H+IMLGSY +FDE SAQYKWLK DL K++R++TPW+ VL+HA
Sbjct: 237 QESGSTSNLYYSFEVAGCHVIMLGSYAEFDEKSAQYKWLKGDLGKVDRRRTPWLIVLIHA 296
Query: 301 PWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYIT 360
PWYNTN AH+GEGESMR +ME+LLY ARVDVVFAGHVHAYERFTR+Y NKAD CGPI++T
Sbjct: 297 PWYNTNLAHKGEGESMRKAMEKLLYEARVDVVFAGHVHAYERFTRVYKNKADECGPIHVT 356
Query: 361 IGDGGNREGLALEFKEPKSP-LSMFQESSFGHARLKILDETRAHWSWYRNNDSDAVIADE 419
IGDGGNREGLAL F++P S LS+++E SFGH RL+IL++T A WSW+RNNDSD ++AD
Sbjct: 357 IGDGGNREGLALTFEKPTSASLSVYREPSFGHGRLRILNQTHAFWSWHRNNDSDCILADS 416
Query: 420 VRLESLSTSKQCWGITDGQESSSSSSSSSVT-KDEL 454
+ L+SLS S+QC T Q+ +S SV DEL
Sbjct: 417 LWLQSLSVSRQC---TQFQQDQASLPLVSVNLNDEL 449
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357511011|ref|XP_003625794.1| Purple acid phosphatase [Medicago truncatula] gi|355500809|gb|AES82012.1| Purple acid phosphatase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 643 bits (1659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 298/427 (69%), Positives = 346/427 (81%), Gaps = 3/427 (0%)
Query: 6 SPAAFRVLL-TICCVPQIMPHSHVSAEEYYIRQPPRSVIQTPNKRSESDPQQVHISLAAK 64
S F +LL TIC + + P +S E ++RQP +I TP++RS S+PQQVHISL K
Sbjct: 7 SLVMFPILLQTICFL--LFPQPLMSQENNFVRQPASQLIITPHQRSNSEPQQVHISLVGK 64
Query: 65 DYIRVSWITDDKEAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPAT 124
D +RVSWIT+DKE E++VEYG G Y+ GEHTSYQ+FFY SGKIH+ IGPLEP T
Sbjct: 65 DKMRVSWITEDKETETMVEYGTKAGEYSEKTMGEHTSYQYFFYNSGKIHNAVIGPLEPNT 124
Query: 125 TYYYRCGGRGPEFSFKMPPANFPIEFAIVGDLGQTEWTNSTLDHVGSKDYDVFLLPGDLS 184
TY+YRCGG GPEFSFK PP+ FPIEF IVGDLGQTEWT STL HV DYDVFL+PGDLS
Sbjct: 125 TYFYRCGGLGPEFSFKTPPSKFPIEFVIVGDLGQTEWTASTLKHVDKSDYDVFLIPGDLS 184
Query: 185 YADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEESG 244
YAD QQPLWDSFGRLVEPYAS RPWMVTEGNHEIE PII P F+AYN RW MP++ESG
Sbjct: 185 YADSQQPLWDSFGRLVEPYASKRPWMVTEGNHEIEIFPIIYPKGFEAYNTRWPMPFQESG 244
Query: 245 SSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYN 304
S+SNLYYSF++AG HIIMLGSY DF +S QY+WL+ DL KI+R KTPW+ ++HAPWY
Sbjct: 245 SNSNLYYSFEVAGVHIIMLGSYADFSVESQQYEWLQLDLTKIDRVKTPWVITMVHAPWYT 304
Query: 305 TNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDG 364
TN AHQGEGESMR +MEELL+ ARVD+VFAGHVHAYERFTRIY+NKAD CGP+Y+TIGDG
Sbjct: 305 TNEAHQGEGESMRQAMEELLFKARVDLVFAGHVHAYERFTRIYNNKADSCGPMYVTIGDG 364
Query: 365 GNREGLALEFKEPKSPLSMFQESSFGHARLKILDETRAHWSWYRNNDSDAVIADEVRLES 424
GNREGLAL FK P SPLS+F+E SFGH RL+IL+ET AHWSW+RNND DA++AD + +ES
Sbjct: 365 GNREGLALRFKNPPSPLSLFREPSFGHGRLRILNETHAHWSWHRNNDKDAIVADGIWIES 424
Query: 425 LSTSKQC 431
LS K C
Sbjct: 425 LSNLKAC 431
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|22331756|ref|NP_190850.2| purple acid phosphatase 22 [Arabidopsis thaliana] gi|75247769|sp|Q8S340.1|PPA22_ARATH RecName: Full=Purple acid phosphatase 22; Flags: Precursor gi|20257495|gb|AAM15917.1|AF492668_1 purple acid phosphatase [Arabidopsis thaliana] gi|332645476|gb|AEE78997.1| purple acid phosphatase 22 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 640 bits (1650), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 294/390 (75%), Positives = 341/390 (87%)
Query: 36 RQPPRSVIQTPNKRSESDPQQVHISLAAKDYIRVSWITDDKEAESVVEYGKLPGRYNTVA 95
RQPPR ++ N RS+SDPQQVHISLA KD++RV++IT+D + ESVVEYGK PG+Y+ A
Sbjct: 29 RQPPRPIVFVHNDRSKSDPQQVHISLAGKDHMRVTFITEDNKVESVVEYGKQPGKYDGKA 88
Query: 96 TGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCGGRGPEFSFKMPPANFPIEFAIVGD 155
TGE TSY++FFYKSGKIHHVKIGPL+ TTYYYRCGG GPEFSFK PP+ FP+EFAIVGD
Sbjct: 89 TGECTSYKYFFYKSGKIHHVKIGPLQANTTYYYRCGGNGPEFSFKTPPSTFPVEFAIVGD 148
Query: 156 LGQTEWTNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGN 215
LGQTEWT +TL H+ S+DYDVFLLPGDLSYAD QPLWDSFGRLVEP AS RPWMVTEGN
Sbjct: 149 LGQTEWTAATLSHINSQDYDVFLLPGDLSYADTHQPLWDSFGRLVEPLASKRPWMVTEGN 208
Query: 216 HEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQ 275
HEIE PII FK+YNARWLMP+ ES S+SNLYYSFD+AG H +MLGSYTDFD +S Q
Sbjct: 209 HEIEFFPIIEHTTFKSYNARWLMPHTESFSTSNLYYSFDVAGVHTVMLGSYTDFDCESDQ 268
Query: 276 YKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAG 335
Y+WL+ADLAK++RK TPW+ VLLHAPWYNTN AH+GEGESMR +ME LL+NARVDVVF+G
Sbjct: 269 YQWLQADLAKVDRKTTPWVVVLLHAPWYNTNEAHEGEGESMREAMESLLFNARVDVVFSG 328
Query: 336 HVHAYERFTRIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQESSFGHARLK 395
HVHAYERF R+Y+NKADPCGPI+ITIGDGGNREGLAL FK+P SPLS F+ESSFGH RLK
Sbjct: 329 HVHAYERFKRVYNNKADPCGPIHITIGDGGNREGLALSFKKPPSPLSEFRESSFGHGRLK 388
Query: 396 ILDETRAHWSWYRNNDSDAVIADEVRLESL 425
++D RAHWSW+RNNDS++++ADEV L+SL
Sbjct: 389 VMDGKRAHWSWHRNNDSNSLLADEVWLDSL 418
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297820012|ref|XP_002877889.1| ATPAP22/PAP22 [Arabidopsis lyrata subsp. lyrata] gi|297323727|gb|EFH54148.1| ATPAP22/PAP22 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 631 bits (1627), Expect = e-178, Method: Compositional matrix adjust.
Identities = 290/390 (74%), Positives = 337/390 (86%)
Query: 36 RQPPRSVIQTPNKRSESDPQQVHISLAAKDYIRVSWITDDKEAESVVEYGKLPGRYNTVA 95
R+PPR ++ N RS+ DPQQVH+SLA KD++RV++IT+D + ESVVEYGK PG+Y+ A
Sbjct: 30 REPPRPIVFVHNDRSKFDPQQVHVSLAGKDHMRVTFITEDNKVESVVEYGKQPGKYDGKA 89
Query: 96 TGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCGGRGPEFSFKMPPANFPIEFAIVGD 155
TGE TSY++ FYKSGKIHHVKIGPL+P TTYYYRCGG GPEFSFK PP+ FP+EFAIVGD
Sbjct: 90 TGECTSYKYIFYKSGKIHHVKIGPLQPNTTYYYRCGGNGPEFSFKTPPSTFPVEFAIVGD 149
Query: 156 LGQTEWTNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGN 215
LGQTEWT +TL + S+DYDVFLLPGDLSYAD QPLWDSFGRLVEP AS RPWMVTEGN
Sbjct: 150 LGQTEWTAATLSQIKSQDYDVFLLPGDLSYADTSQPLWDSFGRLVEPLASQRPWMVTEGN 209
Query: 216 HEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQ 275
HEIE PI FK+YNARWLMP+ ES S SNLYYSFD+AG H +MLGSYTDFD DS Q
Sbjct: 210 HEIEFFPIFEHTTFKSYNARWLMPHTESLSDSNLYYSFDVAGVHTVMLGSYTDFDSDSDQ 269
Query: 276 YKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAG 335
Y+WL+ADLAK++RK TPW+ VLLHAPWYNTN AH+GEGESMR +ME LL++ARVDVVF+G
Sbjct: 270 YQWLQADLAKVDRKTTPWVVVLLHAPWYNTNEAHEGEGESMRVAMECLLFSARVDVVFSG 329
Query: 336 HVHAYERFTRIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQESSFGHARLK 395
HVHAYERF R+Y+NKADPCGPIYITIGDGGNREGLAL FK+P SPLS ++ESSFGH RLK
Sbjct: 330 HVHAYERFKRVYNNKADPCGPIYITIGDGGNREGLALSFKKPPSPLSEYRESSFGHGRLK 389
Query: 396 ILDETRAHWSWYRNNDSDAVIADEVRLESL 425
++D RAHWSW+RNNDS++++ADEV LESL
Sbjct: 390 VMDGKRAHWSWHRNNDSNSLLADEVWLESL 419
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|7669956|emb|CAB89243.1| purple acid phosphatase-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 619 bits (1597), Expect = e-175, Method: Compositional matrix adjust.
Identities = 287/390 (73%), Positives = 334/390 (85%), Gaps = 8/390 (2%)
Query: 36 RQPPRSVIQTPNKRSESDPQQVHISLAAKDYIRVSWITDDKEAESVVEYGKLPGRYNTVA 95
RQPPR ++ N RS+SDPQQ D++RV++IT+D + ESVVEYGK PG+Y+ A
Sbjct: 29 RQPPRPIVFVHNDRSKSDPQQ--------DHMRVTFITEDNKVESVVEYGKQPGKYDGKA 80
Query: 96 TGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCGGRGPEFSFKMPPANFPIEFAIVGD 155
TGE TSY++FFYKSGKIHHVKIGPL+ TTYYYRCGG GPEFSFK PP+ FP+EFAIVGD
Sbjct: 81 TGECTSYKYFFYKSGKIHHVKIGPLQANTTYYYRCGGNGPEFSFKTPPSTFPVEFAIVGD 140
Query: 156 LGQTEWTNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGN 215
LGQTEWT +TL H+ S+DYDVFLLPGDLSYAD QPLWDSFGRLVEP AS RPWMVTEGN
Sbjct: 141 LGQTEWTAATLSHINSQDYDVFLLPGDLSYADTHQPLWDSFGRLVEPLASKRPWMVTEGN 200
Query: 216 HEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQ 275
HEIE PII FK+YNARWLMP+ ES S+SNLYYSFD+AG H +MLGSYTDFD +S Q
Sbjct: 201 HEIEFFPIIEHTTFKSYNARWLMPHTESFSTSNLYYSFDVAGVHTVMLGSYTDFDCESDQ 260
Query: 276 YKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAG 335
Y+WL+ADLAK++RK TPW+ VLLHAPWYNTN AH+GEGESMR +ME LL+NARVDVVF+G
Sbjct: 261 YQWLQADLAKVDRKTTPWVVVLLHAPWYNTNEAHEGEGESMREAMESLLFNARVDVVFSG 320
Query: 336 HVHAYERFTRIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQESSFGHARLK 395
HVHAYERF R+Y+NKADPCGPI+ITIGDGGNREGLAL FK+P SPLS F+ESSFGH RLK
Sbjct: 321 HVHAYERFKRVYNNKADPCGPIHITIGDGGNREGLALSFKKPPSPLSEFRESSFGHGRLK 380
Query: 396 ILDETRAHWSWYRNNDSDAVIADEVRLESL 425
++D RAHWSW+RNNDS++++ADEV L+SL
Sbjct: 381 VMDGKRAHWSWHRNNDSNSLLADEVWLDSL 410
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356505350|ref|XP_003521454.1| PREDICTED: purple acid phosphatase 22-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 609 bits (1570), Expect = e-171, Method: Compositional matrix adjust.
Identities = 281/376 (74%), Positives = 317/376 (84%)
Query: 67 IRVSWITDDKEAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTY 126
+RVSWIT+DK ESVVEYG G Y ATG HTSYQ+F Y SGKIH+V IGPL+P TTY
Sbjct: 1 MRVSWITEDKHTESVVEYGTKAGEYREKATGLHTSYQYFLYNSGKIHNVVIGPLQPGTTY 60
Query: 127 YYRCGGRGPEFSFKMPPANFPIEFAIVGDLGQTEWTNSTLDHVGSKDYDVFLLPGDLSYA 186
+YRCGG GP+FSFK PP FPIEF IVGDLGQTEWT STL HV S DYDVFLLPGDLSYA
Sbjct: 61 FYRCGGSGPDFSFKTPPPKFPIEFVIVGDLGQTEWTASTLKHVDSNDYDVFLLPGDLSYA 120
Query: 187 DFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEESGSS 246
D QQPLWDSFGRLVEPYAS RPWMVTEGNHEIES PII P F+AYNARW MP+++SGS+
Sbjct: 121 DSQQPLWDSFGRLVEPYASKRPWMVTEGNHEIESFPIIYPQGFQAYNARWPMPFQQSGST 180
Query: 247 SNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTN 306
SNLYYSF++ H IMLGSYTDFD S QY WL++DLA I+R KTPW+ VLLHAPWYNTN
Sbjct: 181 SNLYYSFEVTATHFIMLGSYTDFDAQSQQYTWLQSDLANIDRAKTPWVIVLLHAPWYNTN 240
Query: 307 TAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGGN 366
AHQGEGESMR +MEELLY ARVD+VFAGHVHAYERFTRIYDNKAD CGP+Y+TIGDGGN
Sbjct: 241 EAHQGEGESMRQAMEELLYEARVDLVFAGHVHAYERFTRIYDNKADSCGPMYVTIGDGGN 300
Query: 367 REGLALEFKEPKSPLSMFQESSFGHARLKILDETRAHWSWYRNNDSDAVIADEVRLESLS 426
REGLAL FK P SPLS+++E SFGH RL+IL+ET AHWSW+RNND+DAV+AD V +ESLS
Sbjct: 301 REGLALMFKNPPSPLSLYREPSFGHGRLRILNETHAHWSWHRNNDADAVVADGVWIESLS 360
Query: 427 TSKQCWGITDGQESSS 442
+SK C D Q++++
Sbjct: 361 SSKACSKTPDQQDAAN 376
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 454 | ||||||
| TAIR|locus:2083238 | 434 | PAP22 "purple acid phosphatase | 0.874 | 0.914 | 0.753 | 6.9e-173 | |
| TAIR|locus:2083218 | 437 | PAP21 "purple acid phosphatase | 0.876 | 0.910 | 0.668 | 1.1e-151 | |
| TAIR|locus:2085770 | 437 | PAP18 "purple acid phosphatase | 0.878 | 0.913 | 0.598 | 1.1e-137 | |
| TAIR|locus:2083288 | 427 | PAP20 [Arabidopsis thaliana (t | 0.874 | 0.929 | 0.580 | 9.3e-130 | |
| TAIR|locus:2184657 | 475 | PAP26 "AT5G34850" [Arabidopsis | 0.821 | 0.785 | 0.435 | 5.4e-79 | |
| TAIR|locus:2115345 | 466 | PAP25 "purple acid phosphatase | 0.788 | 0.768 | 0.444 | 3.1e-76 | |
| UNIPROTKB|Q09131 | 464 | PAP "Purple acid phosphatase" | 0.803 | 0.786 | 0.441 | 2.7e-75 | |
| TAIR|locus:2010753 | 466 | PAP6 "purple acid phosphatase | 0.713 | 0.695 | 0.456 | 6.5e-74 | |
| TAIR|locus:2005533 | 469 | PAP12 "AT2G27190" [Arabidopsis | 0.817 | 0.791 | 0.414 | 3.7e-71 | |
| TAIR|locus:2042689 | 468 | PAP10 "AT2G16430" [Arabidopsis | 0.806 | 0.782 | 0.417 | 6.1e-71 |
| TAIR|locus:2083238 PAP22 "purple acid phosphatase 22" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1680 (596.4 bits), Expect = 6.9e-173, P = 6.9e-173
Identities = 299/397 (75%), Positives = 346/397 (87%)
Query: 36 RQPPRSVIQTPNKRSESDPQQVHISLAAKDYIRVSWITDDKEAESVVEYGKLPGRYNTVA 95
RQPPR ++ N RS+SDPQQVHISLA KD++RV++IT+D + ESVVEYGK PG+Y+ A
Sbjct: 29 RQPPRPIVFVHNDRSKSDPQQVHISLAGKDHMRVTFITEDNKVESVVEYGKQPGKYDGKA 88
Query: 96 TGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCGGRGPEFSFKMPPANFPIEFAIVGD 155
TGE TSY++FFYKSGKIHHVKIGPL+ TTYYYRCGG GPEFSFK PP+ FP+EFAIVGD
Sbjct: 89 TGECTSYKYFFYKSGKIHHVKIGPLQANTTYYYRCGGNGPEFSFKTPPSTFPVEFAIVGD 148
Query: 156 LGQTEWTNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGN 215
LGQTEWT +TL H+ S+DYDVFLLPGDLSYAD QPLWDSFGRLVEP AS RPWMVTEGN
Sbjct: 149 LGQTEWTAATLSHINSQDYDVFLLPGDLSYADTHQPLWDSFGRLVEPLASKRPWMVTEGN 208
Query: 216 HEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQ 275
HEIE PII FK+YNARWLMP+ ES S+SNLYYSFD+AG H +MLGSYTDFD +S Q
Sbjct: 209 HEIEFFPIIEHTTFKSYNARWLMPHTESFSTSNLYYSFDVAGVHTVMLGSYTDFDCESDQ 268
Query: 276 YKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAG 335
Y+WL+ADLAK++RK TPW+ VLLHAPWYNTN AH+GEGESMR +ME LL+NARVDVVF+G
Sbjct: 269 YQWLQADLAKVDRKTTPWVVVLLHAPWYNTNEAHEGEGESMREAMESLLFNARVDVVFSG 328
Query: 336 HVHAYERFTRIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQESSFGHARLK 395
HVHAYERF R+Y+NKADPCGPI+ITIGDGGNREGLAL FK+P SPLS F+ESSFGH RLK
Sbjct: 329 HVHAYERFKRVYNNKADPCGPIHITIGDGGNREGLALSFKKPPSPLSEFRESSFGHGRLK 388
Query: 396 ILDETRAHWSWYRNNDSDAVIADEVRLESLSTSKQCW 432
++D RAHWSW+RNNDS++++ADEV L+SLSTS CW
Sbjct: 389 VMDGKRAHWSWHRNNDSNSLLADEVWLDSLSTSSSCW 425
|
|
| TAIR|locus:2083218 PAP21 "purple acid phosphatase 21" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1480 (526.0 bits), Expect = 1.1e-151, P = 1.1e-151
Identities = 266/398 (66%), Positives = 314/398 (78%)
Query: 34 YIRQPPRSVIQTPNKRSESDPQQVHISLAAKDYIRVSWITDDKEAESVVEYGKLPGRYNT 93
+ R PPR + + R + PQQVHISLA KD++RV++ TDD S+VEYGK P +Y+
Sbjct: 31 FTRPPPRPLFIVSHGRPKFYPQQVHISLAGKDHMRVTYTTDDLNVASMVEYGKHPKKYDK 90
Query: 94 VATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCGGRGPEFSFKMPPANFPIEFAIV 153
GE TSY +FFY SGKIHHVKIGPL+P T YYYRCGG G EFSFK PP+ FPIEFA+
Sbjct: 91 KTAGESTSYTYFFYNSGKIHHVKIGPLKPNTKYYYRCGGHGDEFSFKTPPSKFPIEFAVA 150
Query: 154 GDLGQTEWTNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTE 213
GDLGQT+WT TLD + +D+DVFLLPGDLSYAD QPLWDSFGRL+E AS+RPWMVTE
Sbjct: 151 GDLGQTDWTVRTLDQIRKRDFDVFLLPGDLSYADTHQPLWDSFGRLLETLASTRPWMVTE 210
Query: 214 GNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDS 273
GNHEIES P +FK+YNARWLMP+ ES S SNLYYSFD+AG H +MLGSYT ++ S
Sbjct: 211 GNHEIESFPTNDHISFKSYNARWLMPHAESLSHSNLYYSFDVAGVHTVMLGSYTPYESHS 270
Query: 274 AQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVF 333
QY WL+ADL K++RKKTPW+ V++H PWY+TN AH GEGE MR+++E LLY A+VDVVF
Sbjct: 271 DQYHWLQADLRKVDRKKTPWLVVVMHTPWYSTNKAHYGEGEKMRSALESLLYRAQVDVVF 330
Query: 334 AGHVHAYERFTRIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQESSFGHAR 393
AGHVH YERF IY+ KADPCGP+YITIGDGGNREGLAL FK+P+SPLS F+ESSFGH R
Sbjct: 331 AGHVHTYERFKPIYNKKADPCGPMYITIGDGGNREGLALRFKKPQSPLSEFRESSFGHGR 390
Query: 394 LKILDETRAHWSWYRNNDSDAVIADEVRLESLSTSKQC 431
L+I+D RAHWSW+RNND + IADEV ES TS C
Sbjct: 391 LRIIDHKRAHWSWHRNNDEMSSIADEVSFESPRTSSHC 428
|
|
| TAIR|locus:2085770 PAP18 "purple acid phosphatase 18" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1348 (479.6 bits), Expect = 1.1e-137, P = 1.1e-137
Identities = 240/401 (59%), Positives = 301/401 (75%)
Query: 29 SAEEYYIRQPPRSVIQTPNK-RSESDPQQVHISLAAKDYIRVSWITDDKEAESVVEYGKL 87
+A + Y+R PR +Q P K +S S P+QVHISLA ++RV+W+T+DK + S VEYG
Sbjct: 21 AAADDYVRPKPRETLQFPWKQKSSSVPEQVHISLAGDKHMRVTWVTNDKSSPSFVEYGTS 80
Query: 88 PGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCGGRGPEFSFKMPPANFP 147
PG+Y+ + GE TSY + Y+SGKIHH IGPLE T YYYRCGG GPEF K PPA FP
Sbjct: 81 PGKYSYLGQGESTSYSYIMYRSGKIHHTVIGPLEADTVYYYRCGGEGPEFHLKTPPAQFP 140
Query: 148 IEFAIVGDLGQTEWTNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSR 207
I FA+ GDLGQT WT STLDH+ Y V LLPGDLSYAD+ Q WD+FG LV+P AS R
Sbjct: 141 ITFAVAGDLGQTGWTKSTLDHIDQCKYAVHLLPGDLSYADYMQHKWDTFGELVQPLASVR 200
Query: 208 PWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYT 267
PWMVT+GNHE ESIP I+ F ++N+RW MPYEESGS+SNLYYSF++AG H IMLGSYT
Sbjct: 201 PWMVTQGNHEKESIPFIVDE-FVSFNSRWKMPYEESGSNSNLYYSFEVAGVHAIMLGSYT 259
Query: 268 DFDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNA 327
D+D S QY WLKADL+K++R++TPW+ VL H PWYN+N AHQ EG+ M ME LLY +
Sbjct: 260 DYDRYSDQYSWLKADLSKVDRERTPWLIVLFHVPWYNSNNAHQHEGDEMMAEMEPLLYAS 319
Query: 328 RVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQES 387
VD+VF GHVHAYER R+ + K+DPCGP++ITIGDGGNREGLA ++K+P S+F+E+
Sbjct: 320 GVDIVFTGHVHAYERTKRVNNGKSDPCGPVHITIGDGGNREGLARKYKDPSPEWSVFREA 379
Query: 388 SFGHARLKILDETRAHWSWYRNNDSDAVIADEVRLESLSTS 428
SFGH L++++ T A W+W+RN+D + +DEV L SL S
Sbjct: 380 SFGHGELQMVNSTHALWTWHRNDDDEPTRSDEVWLNSLVNS 420
|
|
| TAIR|locus:2083288 PAP20 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1273 (453.2 bits), Expect = 9.3e-130, P = 9.3e-130
Identities = 235/405 (58%), Positives = 295/405 (72%)
Query: 34 YIRQPPRS--VIQTPNKRSESDPQQVHISLAAKDYIRVSWITDDKEAESVVEYGKLPGRY 91
Y RQ R VI N+ + P QVHISL D +R+SWIT + SVV YG + G+Y
Sbjct: 22 YDRQGTRKNLVIHPTNEDDPTFPDQVHISLVGPDKMRISWITQSSISPSVV-YGTVSGKY 80
Query: 92 NTVATGEHTSYQFFF-YKSGKIHHVKIGPLEPATTYYYRCGGRGP--EFSFKMPPANFPI 148
A G +SY + Y+SG+I+ V IGPL+P T YYY+CGG EFSF+ PP+ FPI
Sbjct: 81 EGSANGTSSSYHYLLIYRSGQINDVVIGPLKPNTVYYYKCGGPSSTQEFSFRTPPSKFPI 140
Query: 149 EFAIVGDLGQTEWTNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRP 208
+FA+ GDLG +EW+ STL+HV DYDVF+LPGDLSYA+ QPLWD+FGRLV+P AS RP
Sbjct: 141 KFAVSGDLGTSEWSKSTLEHVSKWDYDVFILPGDLSYANMYQPLWDTFGRLVQPLASQRP 200
Query: 209 WMVTEGNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTD 268
WMVT GNHE+E IPI+ + F AYN RW MP+EESGSSSNLYYSF++ G HIIMLGSYTD
Sbjct: 201 WMVTHGNHELEKIPILHSNPFTAYNKRWRMPFEESGSSSNLYYSFNVYGVHIIMLGSYTD 260
Query: 269 FDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGES--MRNSMEELLYN 326
F+ S QY+WL+ +L KI+RK TPW+ ++HAPWYN+N AHQGE ES M+ SME LLY
Sbjct: 261 FEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQGEKESVEMKESMETLLYK 320
Query: 327 ARVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQE 386
ARVD+VFAGHVHAYERF+R+Y +K D CGP+YI IGDGGN EGLA ++++P +S+F+E
Sbjct: 321 ARVDLVFAGHVHAYERFSRVYQDKFDKCGPVYINIGDGGNLEGLATKYRDPNPEISLFRE 380
Query: 387 SSFGHARLKILDETRAHWSWYRNNDSDAVIADEVRLESLSTSKQC 431
+SFGH +L + + T A W W+RN+D +V D V L SL C
Sbjct: 381 ASFGHGQLVVENATHARWEWHRNDDDVSVEKDSVWLTSLLADSSC 425
|
|
| TAIR|locus:2184657 PAP26 "AT5G34850" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 794 (284.6 bits), Expect = 5.4e-79, P = 5.4e-79
Identities = 177/406 (43%), Positives = 237/406 (58%)
Query: 54 PQQVHISLAAKD--YIRVSWITDDKEAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGK 111
PQQVHI+ D + +SW+T D+ S V YG + G+Y VA G + +Y F+ YKSG
Sbjct: 54 PQQVHITQGDYDGKAVIISWVTPDEPGSSQVHYGAVQGKYEFVAQGTYHNYTFYKYKSGF 113
Query: 112 IHHVKIGPLEPATTYYYRC--GGRGPEFSFKMPPANFP---IEFAIVGDLGQTEWTNSTL 166
IHH + LE T YYY+ G EF F PP P +F I+GD+GQT + STL
Sbjct: 114 IHHCLVSDLEHDTKYYYKIESGESSREFWFVTPPHVHPDASYKFGIIGDMGQTFNSLSTL 173
Query: 167 DHVGSKDYDVFLLPGDLSYADFQQ-----PLWDSFGRLVEPYASSRPWMVTEGNHEIESI 221
+H L GDLSYAD Q WDS+GR VE + +PW+ + GNHE++ +
Sbjct: 174 EHYMESGAQAVLFLGDLSYADRYQYNDVGVRWDSWGRFVERSTAYQPWLWSAGNHEVDYM 233
Query: 222 PI---ILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKW 278
P + P F+ Y R+ PY S SSS L+Y+ A AHII+L SY+ F + + Q+ W
Sbjct: 234 PYMGEVTP--FRNYLQRYTTPYLASKSSSPLWYAVRRASAHIIVLSSYSPFVKYTPQWHW 291
Query: 279 LKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVH 338
L +L +++R+KTPW+ VL+H P YN+N AH EGESMR + EE +VDV+FAGHVH
Sbjct: 292 LSEELTRVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFEEWFVQHKVDVIFAGHVH 351
Query: 339 AYERFTRI----YDNKA-------DPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQES 387
AYER RI Y+ + D P+YIT+GDGGN+EGLA F EP+ S F+E+
Sbjct: 352 AYERSYRISNVRYNVSSGDRYPVPDKSAPVYITVGDGGNQEGLAGRFTEPQPDYSAFREA 411
Query: 388 SFGHARLKILDETRAHWSWYRNNDSDAVIADEVRLESLSTSKQCWG 433
S+GH+ L I + T A + W RN+D V DE L + Q WG
Sbjct: 412 SYGHSTLDIKNRTHAIYHWNRNDDGKKVATDEFVLHN-----QYWG 452
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| TAIR|locus:2115345 PAP25 "purple acid phosphatase 25" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 768 (275.4 bits), Expect = 3.1e-76, P = 3.1e-76
Identities = 171/385 (44%), Positives = 230/385 (59%)
Query: 67 IRVSWITDDKEAES-VVEYGK-LPGRYNTVATGEH---TSYQFFFYKSGKIHHVKIGPLE 121
I +SW+T A S VV Y K + G H +SY+F+ Y SG +HH I LE
Sbjct: 66 IIISWVTPLNLAGSNVVTYWKAVDGDVKPKKKRGHASTSSYRFYDYTSGFLHHATIKGLE 125
Query: 122 PATTYYYRCGGRGP--EFSFKMPPA---NFPIEFAIVGDLGQTEWTNSTLDHVGSKDY-D 175
T Y Y G G +FSF PP + P F I+GDLGQT +N TL H S
Sbjct: 126 YDTKYIYEVGTDGSVRQFSFTSPPKVGPDVPYTFGIIGDLGQTLASNETLYHYMSNPKGQ 185
Query: 176 VFLLPGDLSYAD----FQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPII-LPHAFK 230
L PGDLSYAD Q WDS+GR VEP A+ + ++ GNHEI+ +P I PHAFK
Sbjct: 186 AVLFPGDLSYADDHPNHDQRKWDSWGRFVEPCAAYQTFIYAAGNHEIDFVPNIGEPHAFK 245
Query: 231 AYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKK 290
Y R+ Y+ S S S L+YS A AHII+L SY+ + + + QY WL+ +L K+NR++
Sbjct: 246 PYIHRYHNAYKASKSISPLWYSIRRASAHIIVLSSYSAYGKYTPQYVWLEQELKKVNREE 305
Query: 291 TPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNK 350
TPW+ V++H+PWYN+N H EGESMR E N++VD+V +GHVH+YER R+ + K
Sbjct: 306 TPWLIVMVHSPWYNSNNYHYMEGESMRAMFESWFVNSKVDLVLSGHVHSYERSERVSNIK 365
Query: 351 -----------ADPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQESSFGHARLKILDE 399
DP PIYITIGDGGN EG+A F +P+ S ++E+SFGHA L+I +
Sbjct: 366 YNITNGLSYPVKDPSAPIYITIGDGGNIEGIANSFTDPQPSYSAYREASFGHAVLEIYNR 425
Query: 400 TRAHWSWYRNNDSDAVIADEVRLES 424
T A+++W+RN D++ V AD + L +
Sbjct: 426 THAYYTWHRNQDNEPVAADSIMLHN 450
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| UNIPROTKB|Q09131 PAP "Purple acid phosphatase" [Glycine max (taxid:3847)] | Back alignment and assigned GO terms |
|---|
Score = 759 (272.2 bits), Expect = 2.7e-75, P = 2.7e-75
Identities = 174/394 (44%), Positives = 222/394 (56%)
Query: 54 PQQVHIS---LAAKDYIRVSWITDDKEAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSG 110
PQQVHI+ L K I VSW+T D+ S V Y +A G+ +Y+FF Y SG
Sbjct: 54 PQQVHITQGDLVGKAVI-VSWVTVDEPGSSEVHYWSENSDKKKIAEGKLVTYRFFNYSSG 112
Query: 111 KIHHVKIGPLEPATTYYYRCG-GRGP-EFSFKMPPA---NFPIEFAIVGDLGQTEWTNST 165
IHH I LE T YYY G G +F F PP + P F ++GDLGQ+ +N T
Sbjct: 113 FIHHTTIRNLEYKTKYYYEVGLGNTTRQFWFVTPPEIGPDVPYTFGLIGDLGQSFDSNKT 172
Query: 166 LDH--VGSKDYDVFLLPGDLSYAD----FQQPLWDSFGRLVEPYASSRPWMVTEGNHEIE 219
L H + + L GDLSYAD WDS+GR E + +PW+ T GNHE
Sbjct: 173 LSHYELNPRKGQTVLFVGDLSYADNYPNHDNIRWDSWGRFTERSVAYQPWIWTAGNHENH 232
Query: 220 SIPIILPHA-FKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKW 278
P I FK Y R+ +PY+ S S+S +YS A AHII+L SY+ + + + QYKW
Sbjct: 233 FAPEIGETVPFKPYTHRYHVPYKASQSTSPFWYSIKRASAHIIVLASYSAYGKYTPQYKW 292
Query: 279 LKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVH 338
L+ +L K+NR +TPW+ VL+H+PWYN+ H EGE+MR E +VDVVFAGHVH
Sbjct: 293 LEKELPKVNRTETPWLIVLMHSPWYNSYNYHYMEGETMRVMYEPWFVQYKVDVVFAGHVH 352
Query: 339 AYERFTRIYDNKA------------DPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQE 386
AYER R+ N A D P+YITIGDGG EGLA EP+ S F+E
Sbjct: 353 AYERSERV-SNVAYNIVNGLCAPVNDKSAPVYITIGDGGTLEGLATNMTEPQPKYSAFRE 411
Query: 387 SSFGHARLKILDETRAHWSWYRNNDSDAVIADEV 420
+SFGHA I + T AH+SW+RN D AV AD +
Sbjct: 412 ASFGHAIFDITNRTHAHYSWHRNQDGVAVEADSL 445
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| TAIR|locus:2010753 PAP6 "purple acid phosphatase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 746 (267.7 bits), Expect = 6.5e-74, P = 6.5e-74
Identities = 158/346 (45%), Positives = 214/346 (61%)
Query: 101 SYQFFFYKSGKIHHVKIGPLEPATTYYYRCGGRGP--EFSFKMPPA---NFPIEFAIVGD 155
SY+F+ Y SG +HH I LE T Y Y G +FSF PP + P F I+GD
Sbjct: 105 SYRFYDYSSGFLHHATIKGLEYDTKYIYEVGTDKSVRQFSFTTPPKIGPDVPYTFGIIGD 164
Query: 156 LGQTEWTNSTLDHVGSKDY-DVFLLPGDLSYAD----FQQPLWDSFGRLVEPYASSRPWM 210
LGQT +N TL H S L GDLSYAD Q WD++GR +EP A+ +P++
Sbjct: 165 LGQTYASNETLYHYMSNPKGQAVLFAGDLSYADDHPNHDQRKWDTWGRFMEPCAAYQPFI 224
Query: 211 VTEGNHEIESIPII-LPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDF 269
GNHEI+ +P I PHAFK Y R+ Y+ S S+S L+YS A AHII+L SY+ +
Sbjct: 225 FAAGNHEIDFVPNIGEPHAFKPYTHRYPNAYKASQSTSPLWYSVRRASAHIIVLSSYSAY 284
Query: 270 DEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARV 329
+ + QY WL+ +L +NR++TPW+ V++H+PWYN+N H EGESMR E L N++V
Sbjct: 285 GKYTPQYIWLEQELKNVNREETPWLIVIVHSPWYNSNNYHYMEGESMRVMFESWLVNSKV 344
Query: 330 DVVFAGHVHAYERFTRIYDNK-----------ADPCGPIYITIGDGGNREGLALEFKEPK 378
D+V +GHVHAYER RI + K DP PIYITIGDGGN EG+A F +P+
Sbjct: 345 DLVLSGHVHAYERSERISNIKYNITNGLSSPVKDPNAPIYITIGDGGNIEGIANSFVDPQ 404
Query: 379 SPLSMFQESSFGHARLKILDETRAHWSWYRNNDSDAVIADEVRLES 424
S ++E+SFGHA L+I++ T A ++W+RN D++ V AD + L +
Sbjct: 405 PSYSAYREASFGHAVLEIMNRTHAQYTWHRNQDNEPVAADSIMLHN 450
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| TAIR|locus:2005533 PAP12 "AT2G27190" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 720 (258.5 bits), Expect = 3.7e-71, P = 3.7e-71
Identities = 164/396 (41%), Positives = 227/396 (57%)
Query: 52 SDPQQVHISLAAKDY--IRVSWITDDKEAESVVEYGKLPGRYNTVATGEHTSYQFFFYKS 109
+ PQQVH++ + + +SW+T K V+Y + A +Y+FF Y S
Sbjct: 58 NSPQQVHVTQGNHEGNGVIISWVTPVKPGSKTVQYWCENEKSRKQAEATVNTYRFFNYTS 117
Query: 110 GKIHHVKIGPLEPATTYYYRCG-GR-GPEFSFKMPPAN---FPIEFAIVGDLGQTEWTNS 164
G IHH I LE T YYY G G+ F F +PP + P F ++GDLGQT +NS
Sbjct: 118 GYIHHCLIDDLEFDTKYYYEIGSGKWSRRFWFFIPPKSGPDVPYTFGLIGDLGQTYDSNS 177
Query: 165 TLDH--VGSKDYDVFLLPGDLSYAD----FQQPLWDSFGRLVEPYASSRPWMVTEGNHEI 218
TL H + L GDLSYAD WD++GR VE + +PW+ T GNHEI
Sbjct: 178 TLSHYEMNPGKGQAVLFVGDLSYADRYPNHDNNRWDTWGRFVERSVAYQPWIWTAGNHEI 237
Query: 219 ESIPIILP-HAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYK 277
+ +P I FK + R+ P++ SGS S L+YS A A+II++ Y+ + + QYK
Sbjct: 238 DFVPDIGEIEPFKPFMNRYHTPHKASGSISPLWYSIKRASAYIIVMSCYSSYGIYTPQYK 297
Query: 278 WLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHV 337
WL+ +L +NR +TPW+ VL+H+P+Y++ H EGE++R E+ +VDVVFAGHV
Sbjct: 298 WLEKELQGVNRTETPWLIVLVHSPFYSSYVHHYMEGETLRVMYEQWFVKYKVDVVFAGHV 357
Query: 338 HAYERFTRI----YD--NK-----ADPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQE 386
HAYER R+ Y+ N +D PIYITIGDGGN EGL + +P+ S F+E
Sbjct: 358 HAYERSERVSNIAYNIVNGLCEPISDESAPIYITIGDGGNSEGLLTDMMQPQPKYSAFRE 417
Query: 387 SSFGHARLKILDETRAHWSWYRNNDSDAVIADEVRL 422
+SFGH L+I + T A++SW RN D +AV AD V L
Sbjct: 418 ASFGHGLLEIKNRTHAYFSWNRNQDGNAVAADSVWL 453
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| TAIR|locus:2042689 PAP10 "AT2G16430" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 718 (257.8 bits), Expect = 6.1e-71, P = 6.1e-71
Identities = 164/393 (41%), Positives = 223/393 (56%)
Query: 54 PQQVHIS---LAAKDYIRVSWITDDKEAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSG 110
PQQVHI+ + K I VSW+T + + + V Y K A G+ +Y+F+ Y SG
Sbjct: 59 PQQVHITQGDVEGKAVI-VSWVTQEAKGSNKVIYWKENSTKKHKAHGKTNTYKFYNYTSG 117
Query: 111 KIHHVKIGPLEPATTYYYRCG-GRGP-EFSFKMPPA---NFPIEFAIVGDLGQTEWTNST 165
IHH I LE T YYY G G+ +F F PP + P F ++GDLGQ+ +N T
Sbjct: 118 FIHHCPIRNLEYDTKYYYVLGVGQTERKFWFFTPPEIGPDVPYTFGLIGDLGQSYDSNIT 177
Query: 166 LDHVGSKDY--DVFLLPGDLSYAD----FQQPLWDSFGRLVEPYASSRPWMVTEGNHEIE 219
L H + L GD+SYAD WDS+GR E + +PW+ T GNHE++
Sbjct: 178 LTHYENNPTKGQAVLFVGDISYADTYPDHDNRRWDSWGRFAERSTAYQPWIWTTGNHELD 237
Query: 220 SIPIILPHA-FKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKW 278
P I + FK + R+ PY SGS+ +YS A+II+L SY+ + + + QY+W
Sbjct: 238 FAPEIGENRPFKPFTHRYRTPYRSSGSTEPFWYSIKRGPAYIIVLASYSAYGKYTPQYQW 297
Query: 279 LKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVH 338
L+ + K+NR +TPW+ VL+H+PWYN+ H EGE+MR E +VDVVFAGHVH
Sbjct: 298 LEEEFPKVNRTETPWLIVLMHSPWYNSYDYHYMEGETMRVMYEAWFVKYKVDVVFAGHVH 357
Query: 339 AYERFTRI----YD--NKA-----DPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQES 387
AYER R+ Y+ N D P+YITIGDGGN EGLA + EP+ S F+E+
Sbjct: 358 AYERSERVSNIAYNVVNGICTPVKDQSAPVYITIGDGGNIEGLATKMTEPQPKYSAFREA 417
Query: 388 SFGHARLKILDETRAHWSWYRNNDSDAVIADEV 420
SFGHA I + T AH+ W+RN+D AV D +
Sbjct: 418 SFGHAIFSIKNRTHAHYGWHRNHDGYAVEGDRM 450
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q8S340 | PPA22_ARATH | 3, ., 1, ., 3, ., 2 | 0.7538 | 0.8590 | 0.8986 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| GSVIVG00021635001 | SubName- Full=Chromosome chr8 scaffold_23, whole genome shotgun sequence; (449 aa) | ||||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 454 | |||
| PLN02533 | 427 | PLN02533, PLN02533, probable purple acid phosphata | 0.0 | |
| cd00839 | 294 | cd00839, MPP_PAPs, purple acid phosphatases of the | 1e-112 | |
| pfam00149 | 185 | pfam00149, Metallophos, Calcineurin-like phosphoes | 2e-20 | |
| pfam14008 | 62 | pfam14008, Metallophos_C, Iron/zinc purple acid ph | 3e-15 | |
| cd00838 | 131 | cd00838, MPP_superfamily, metallophosphatase super | 3e-10 | |
| cd07378 | 277 | cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 | 2e-08 | |
| COG1409 | 301 | COG1409, Icc, Predicted phosphohydrolases [General | 4e-08 | |
| cd07395 | 262 | cd07395, MPP_CSTP1, Homo sapiens CSTP1 and related | 7e-08 | |
| cd07402 | 240 | cd07402, MPP_GpdQ, Enterobacter aerogenes GpdQ and | 7e-05 |
| >gnl|CDD|215292 PLN02533, PLN02533, probable purple acid phosphatase | Back alignment and domain information |
|---|
Score = 547 bits (1411), Expect = 0.0
Identities = 241/405 (59%), Positives = 299/405 (73%), Gaps = 8/405 (1%)
Query: 34 YIRQPPRS--VIQTPNKRSESDPQQVHISLAAKDYIRVSWITDDKEAESVVEYGKLPGRY 91
Y R R VI N+ + P QVHISL D +R+SWIT D SVV YG + G+Y
Sbjct: 22 YDRPGTRKNLVIHPDNEDDPTHPDQVHISLVGPDKMRISWITQDSIPPSVV-YGTVSGKY 80
Query: 92 NTVATGEHTSYQFFF-YKSGKIHHVKIGPLEPATTYYYRCGG--RGPEFSFKMPPANFPI 148
A G +SY + Y+SG+I+ V IGPL+P T YYY+CGG EFSF+ PP+ FPI
Sbjct: 81 EGSANGTSSSYHYLLIYRSGQINDVVIGPLKPNTVYYYKCGGPSSTQEFSFRTPPSKFPI 140
Query: 149 EFAIVGDLGQTEWTNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRP 208
+FA+ GDLG +EWT STL+HV DYDVF+LPGDLSYA+F QPLWD+FGRLV+P AS RP
Sbjct: 141 KFAVSGDLGTSEWTKSTLEHVSKWDYDVFILPGDLSYANFYQPLWDTFGRLVQPLASQRP 200
Query: 209 WMVTEGNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTD 268
WMVT GNHE+E IPI+ P F AYNARW MP+EESGS+SNLYYSF++ G HIIMLGSYTD
Sbjct: 201 WMVTHGNHELEKIPILHPEKFTAYNARWRMPFEESGSTSNLYYSFNVYGVHIIMLGSYTD 260
Query: 269 FDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGES--MRNSMEELLYN 326
F+ S QY+WL+ +L KI+RK TPW+ ++HAPWYN+N AHQGE ES M+ SME LLY
Sbjct: 261 FEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQGEKESVGMKESMETLLYK 320
Query: 327 ARVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQE 386
ARVD+VFAGHVHAYERF R+Y K D CGP+YITIGDGGNREGLA ++ +PK +S+F+E
Sbjct: 321 ARVDLVFAGHVHAYERFDRVYQGKTDKCGPVYITIGDGGNREGLATKYIDPKPDISLFRE 380
Query: 387 SSFGHARLKILDETRAHWSWYRNNDSDAVIADEVRLESLSTSKQC 431
+SFGH +L ++D W+W+RN+D +V +D V L+SL T C
Sbjct: 381 ASFGHGQLNVVDANTMEWTWHRNDDDQSVASDSVWLKSLLTEPGC 425
|
Length = 427 |
| >gnl|CDD|163615 cd00839, MPP_PAPs, purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 333 bits (855), Expect = e-112
Identities = 127/298 (42%), Positives = 171/298 (57%), Gaps = 23/298 (7%)
Query: 145 NFPIEFAIVGDLGQ-TEWTNSTLDHVGS--KDYDVFLLPGDLSYADFQ--QPLWDSFGRL 199
+ P +FA+ GD+GQ T + +TLDH+ +YD L GDL+YAD WD+F R
Sbjct: 2 DTPFKFAVFGDMGQNTNNSTNTLDHLEKELGNYDAILHVGDLAYADGYNNGSRWDTFMRQ 61
Query: 200 VEPYASSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAH 259
+EP AS P+MVT GNHE + KA+ R+ P+ SGS+SNL+YSFD+ H
Sbjct: 62 IEPLASYVPYMVTPGNHEADYNFSFY--KIKAFFPRFRFPHSPSGSTSNLWYSFDVGPVH 119
Query: 260 IIMLGSYTDFDED---SAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQ--GEGE 314
+ L + DF D S QY WL+ADLAK++R KTPWI V+ H P Y +NT H EGE
Sbjct: 120 FVSLSTEVDFYGDGPGSPQYDWLEADLAKVDRSKTPWIIVMGHRPMYCSNTDHDDCIEGE 179
Query: 315 SMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKA--------DPCGPIYITIGDGGN 366
MR ++E+L Y VD+V +GHVHAYER +Y+ +P GP++I IG GGN
Sbjct: 180 KMRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVVGDCNPYSNPKGPVHIVIGAGGN 239
Query: 367 REGLALEFKEPKSPLSMFQESSFGHARLKILDETRAHWSWYRNNDSDAVIADEVRLES 424
EGL P S F+ES +G RL + + T H+ W RN+D V+ D +
Sbjct: 240 DEGLDPFSAPPP-AWSAFRESDYGFGRLTVHNSTHLHFEWIRNDDG--VVIDSFWIIK 294
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 294 |
| >gnl|CDD|215750 pfam00149, Metallophos, Calcineurin-like phosphoesterase | Back alignment and domain information |
|---|
Score = 87.9 bits (217), Expect = 2e-20
Identities = 33/195 (16%), Positives = 60/195 (30%), Gaps = 15/195 (7%)
Query: 150 FAIVGDL----GQTEWTNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYAS 205
++GDL + L+ +G D+ L GDL + +
Sbjct: 2 ILVIGDLHGGLDDLDLLLLLLELLGEPKPDLVLFLGDLVDRGPPSLEVLALL-FALKLKA 60
Query: 206 SRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGS 265
P + GNH+ +S L + ++ II L S
Sbjct: 61 PGPVYLVRGNHDFDSGNSELGFYLECAGLPYV----------LGNGDVSNGTVEIIGLSS 110
Query: 266 YTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLY 325
++L+ + +L+H P + + ++E+LL
Sbjct: 111 LYGKGGGLVWEEFLELLDLLLLAALVDGKILLVHGPLSPSLDSGDDIYLFGEEALEDLLK 170
Query: 326 NARVDVVFAGHVHAY 340
+ VD+V GH H
Sbjct: 171 DNGVDLVLRGHTHVP 185
|
This family includes a diverse range of phosphoesterases, including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this superfamily centre around the metal chelating residues. Length = 185 |
| >gnl|CDD|206178 pfam14008, Metallophos_C, Iron/zinc purple acid phosphatase-like protein C | Back alignment and domain information |
|---|
Score = 69.8 bits (172), Expect = 3e-15
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 355 GPIYITIGDGGNREGLALEFKEPKSPLSMFQESSFGHARLKILDETRAHWSWYRNNDSDA 414
P++I +G GN F +P+ P S F++S +G+ RL + + T +W + R+ D
Sbjct: 2 APVHIVVGAAGNGLD---PFPDPQPPWSAFRDSDYGYGRLTVHNRTHLYWEFVRS--DDG 56
Query: 415 VIADEV 420
+ D
Sbjct: 57 TVLDSF 62
|
This domain is found at the C-terminus of Purple acid phosphatase proteins. Length = 62 |
| >gnl|CDD|163614 cd00838, MPP_superfamily, metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 57.7 bits (139), Expect = 3e-10
Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 15/111 (13%)
Query: 259 HIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFV-------LLHAPWYNTNTAHQG 311
+++LG D + L A LA + P V L H P Y+
Sbjct: 29 FVLVLGDLVGDGPDPEE--VLAAALALLLLLGIPVYVVPGNHDILLTHGPPYDPLDELSP 86
Query: 312 EGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIG 362
+ + ++ ELL VD+V +GH H YER D G +YI G
Sbjct: 87 DEDPGSEALLELLEKYGVDLVLSGHTHVYERREP------DGGGTLYINPG 131
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 131 |
| >gnl|CDD|163621 cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 55.0 bits (133), Expect = 2e-08
Identities = 59/292 (20%), Positives = 88/292 (30%), Gaps = 76/292 (26%)
Query: 150 FAIVGDLGQTEWTNSTLDHVG--------SKDYDVFLLPGDLSY----ADFQQPLW-DSF 196
F +GD G + V D L GD Y P + +F
Sbjct: 3 FLALGDWG--GGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTF 60
Query: 197 GRLVEPYASSR---PWMVTEGNH--------EIESIPIILPHAFKAYNARWLMPYEESGS 245
+ Y++ PW + GNH +I+ + + RW MP
Sbjct: 61 ---EDVYSAPSLQVPWYLVLGNHDYSGNVSAQIDY-------TKRPNSPRWTMP------ 104
Query: 246 SSNLYYSFDIAG------AHIIML------GSYTDFD---------EDSAQYKWLKADLA 284
YY IM+ G+ D Q WL+ LA
Sbjct: 105 --AYYYRVSFPFPSSDTTVEFIMIDTVPLCGNSDDIASPYGPPNGKLAEEQLAWLEKTLA 162
Query: 285 KINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFT 344
W V+ H P Y ++ H G + + + LL +VD +GH H +
Sbjct: 163 A---STADWKIVVGHHPIY-SSGEH-GPTSCLVDRLLPLLKKYKVDAYLSGHDHNLQHI- 216
Query: 345 RIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQESSFGHARLKI 396
K D G ++ G G + S F S G A L++
Sbjct: 217 -----KDDGSGTSFVVSGAGSKARPSVKHIDKVPQFFSGFTSSGGGFAYLEL 263
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 277 |
| >gnl|CDD|224327 COG1409, Icc, Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Score = 54.2 bits (130), Expect = 4e-08
Identities = 33/181 (18%), Positives = 66/181 (36%), Gaps = 17/181 (9%)
Query: 163 NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRL---VEPYASSRPWMVTEGNHEIE 219
+ L + D+ ++ GDL + +P + + RL + P +V GNH+
Sbjct: 23 EALLAAIEQLKPDLLVVTGDL--TNDGEP--EEYRRLKELLARLELPAPVIVVPGNHDAR 78
Query: 220 SIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWL 279
+ + + + G+ S+ + + G + G + Q WL
Sbjct: 79 -----VVNGEAFSDQFFNRYAVLVGACSSGG--WRVIGLDSSVPGV-PLGRLGAEQLDWL 130
Query: 280 KADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELL--YNARVDVVFAGHV 337
+ LA + + VL H P + T + ++L + V +V +GH+
Sbjct: 131 EEALAAAPERAKDTVVVLHHHPLPSPGTGVDRVALRDAGELLDVLIAHGNDVRLVLSGHI 190
Query: 338 H 338
H
Sbjct: 191 H 191
|
Length = 301 |
| >gnl|CDD|163638 cd07395, MPP_CSTP1, Homo sapiens CSTP1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 53.1 bits (128), Expect = 7e-08
Identities = 35/141 (24%), Positives = 55/141 (39%), Gaps = 22/141 (15%)
Query: 208 PWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYT 267
P + GNH++ + P + K Y + G Y+SF + G I+L S
Sbjct: 88 PLVCVCGNHDVGNTPT--EESIKDYRDVF-------GDD---YFSFWVGGVFFIVLNSQL 135
Query: 268 DFD------EDSAQYKWLKADLAKINRKKTPWIFVLLHAPWY----NTNTAHQGEGESMR 317
FD AQ WL+ L + V H PW+ + ++ +S+R
Sbjct: 136 FFDPSEVPELAQAQDVWLEEQLEIAKESDCKHVIVFQHIPWFLEDPDEEDSYFNIPKSVR 195
Query: 318 NSMEELLYNARVDVVFAGHVH 338
+ + A V VF+GH H
Sbjct: 196 KPLLDKFKKAGVKAVFSGHYH 216
|
CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 262 |
| >gnl|CDD|163645 cd07402, MPP_GpdQ, Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 43.7 bits (104), Expect = 7e-05
Identities = 48/185 (25%), Positives = 74/185 (40%), Gaps = 33/185 (17%)
Query: 165 TLDHVGSK--DYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSR-PWMVTEGNHEIESI 221
L H+ + D+ L+ GDL+ +S+ RL E A+ P + GNH+
Sbjct: 30 VLAHINALHPRPDLVLVTGDLT----DDGSPESYERLRELLAALPIPVYLLPGNHD---- 81
Query: 222 PIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDS-----AQY 276
A +A P E + + Y D+ G +I+L S + + AQ
Sbjct: 82 ---DRAAMRAV-----FP-ELPPAPGFVQYVVDLGGWRLILLDS-SVPGQHGGELCAAQL 131
Query: 277 KWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNS---MEELLYNARVDVVF 333
WL+A LA+ K T V LH P + A + +RN+ L + V +
Sbjct: 132 DWLEAALAEAPDKPT---LVFLHHPPFPVGIAWM-DAIGLRNAEALAAVLARHPNVRAIL 187
Query: 334 AGHVH 338
GHVH
Sbjct: 188 CGHVH 192
|
GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 240 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 454 | |||
| PLN02533 | 427 | probable purple acid phosphatase | 100.0 | |
| KOG1378 | 452 | consensus Purple acid phosphatase [Carbohydrate tr | 100.0 | |
| cd00839 | 294 | MPP_PAPs purple acid phosphatases of the metalloph | 100.0 | |
| PTZ00422 | 394 | glideosome-associated protein 50; Provisional | 100.0 | |
| cd07378 | 277 | MPP_ACP5 Homo sapiens acid phosphatase 5 and relat | 100.0 | |
| cd07395 | 262 | MPP_CSTP1 Homo sapiens CSTP1 and related proteins, | 99.96 | |
| PF09423 | 453 | PhoD: PhoD-like phosphatase; InterPro: IPR018946 T | 99.96 | |
| COG3540 | 522 | PhoD Phosphodiesterase/alkaline phosphatase D [Ino | 99.96 | |
| KOG2679 | 336 | consensus Purple (tartrate-resistant) acid phospha | 99.94 | |
| cd07402 | 240 | MPP_GpdQ Enterobacter aerogenes GpdQ and related p | 99.93 | |
| cd07396 | 267 | MPP_Nbla03831 Homo sapiens Nbla03831 and related p | 99.92 | |
| PRK11148 | 275 | cyclic 3',5'-adenosine monophosphate phosphodieste | 99.92 | |
| cd07401 | 256 | MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metal | 99.88 | |
| cd07399 | 214 | MPP_YvnB Bacillus subtilis YvnB and related protei | 99.86 | |
| cd00842 | 296 | MPP_ASMase acid sphingomyelinase and related prote | 99.81 | |
| cd08163 | 257 | MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related | 99.79 | |
| PF00149 | 200 | Metallophos: Calcineurin-like phosphoesterase; Int | 99.76 | |
| cd07393 | 232 | MPP_DR1119 Deinococcus radiodurans DR1119 and rela | 99.73 | |
| cd07383 | 199 | MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase | 99.73 | |
| cd07392 | 188 | MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and rel | 99.72 | |
| TIGR03767 | 496 | P_acnes_RR metallophosphoesterase, PPA1498 family. | 99.71 | |
| TIGR03729 | 239 | acc_ester putative phosphoesterase. Members of thi | 99.7 | |
| COG1409 | 301 | Icc Predicted phosphohydrolases [General function | 99.67 | |
| cd07385 | 223 | MPP_YkuE_C Bacillus subtilis YkuE and related prot | 99.64 | |
| cd07388 | 224 | MPP_Tt1561 Thermus thermophilus Tt1561 and related | 99.62 | |
| cd07400 | 144 | MPP_YydB Bacillus subtilis YydB and related protei | 99.61 | |
| PRK11340 | 271 | phosphodiesterase YaeI; Provisional | 99.6 | |
| cd07404 | 166 | MPP_MS158 Microscilla MS158 and related proteins, | 99.57 | |
| KOG1432 | 379 | consensus Predicted DNA repair exonuclease SIA1 [G | 99.54 | |
| cd00840 | 223 | MPP_Mre11_N Mre11 nuclease, N-terminal metallophos | 99.54 | |
| TIGR03768 | 492 | RPA4764 metallophosphoesterase, RPA4764 family. Th | 99.5 | |
| PF14008 | 62 | Metallophos_C: Iron/zinc purple acid phosphatase-l | 99.42 | |
| cd00838 | 131 | MPP_superfamily metallophosphatase superfamily, me | 99.36 | |
| cd07379 | 135 | MPP_239FB Homo sapiens 239FB and related proteins, | 99.36 | |
| cd07397 | 238 | MPP_DevT Myxococcus xanthus DevT and related prote | 99.34 | |
| COG1408 | 284 | Predicted phosphohydrolases [General function pred | 99.32 | |
| PF12850 | 156 | Metallophos_2: Calcineurin-like phosphoesterase su | 99.23 | |
| cd08166 | 195 | MPP_Cdc1_like_1 uncharacterized subgroup related t | 99.23 | |
| KOG3770 | 577 | consensus Acid sphingomyelinase and PHM5 phosphate | 99.22 | |
| PRK05340 | 241 | UDP-2,3-diacylglucosamine hydrolase; Provisional | 99.2 | |
| COG2129 | 226 | Predicted phosphoesterases, related to the Icc pro | 99.17 | |
| cd07389 | 228 | MPP_PhoD Bacillus subtilis PhoD and related protei | 99.16 | |
| cd08165 | 156 | MPP_MPPE1 human MPPE1 and related proteins, metall | 99.16 | |
| cd07384 | 171 | MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and re | 99.11 | |
| cd00841 | 155 | MPP_YfcE Escherichia coli YfcE and related protein | 99.1 | |
| TIGR01854 | 231 | lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. | 99.1 | |
| cd07394 | 178 | MPP_Vps29 Homo sapiens Vps29 and related proteins, | 99.09 | |
| PF14582 | 255 | Metallophos_3: Metallophosphoesterase, calcineurin | 99.07 | |
| TIGR00583 | 405 | mre11 DNA repair protein (mre11). All proteins in | 99.06 | |
| TIGR00040 | 158 | yfcE phosphoesterase, MJ0936 family. Members of th | 98.98 | |
| cd00845 | 252 | MPP_UshA_N_like Escherichia coli UshA-like family, | 98.98 | |
| PRK09453 | 182 | phosphodiesterase; Provisional | 98.97 | |
| cd07403 | 129 | MPP_TTHA0053 Thermus thermophilus TTHA0053 and rel | 98.95 | |
| cd08164 | 193 | MPP_Ted1 Saccharomyces cerevisiae Ted1 and related | 98.86 | |
| PHA02546 | 340 | 47 endonuclease subunit; Provisional | 98.85 | |
| cd07406 | 257 | MPP_CG11883_N Drosophila melanogaster CG11883 and | 98.85 | |
| cd07410 | 277 | MPP_CpdB_N Escherichia coli CpdB and related prote | 98.81 | |
| cd07398 | 217 | MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and relat | 98.81 | |
| COG1768 | 230 | Predicted phosphohydrolase [General function predi | 98.8 | |
| cd00844 | 262 | MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-t | 98.76 | |
| cd07412 | 288 | MPP_YhcR_N Bacillus subtilis YhcR endonuclease and | 98.71 | |
| COG0420 | 390 | SbcD DNA repair exonuclease [DNA replication, reco | 98.65 | |
| cd07411 | 264 | MPP_SoxB_N Thermus thermophilus SoxB and related p | 98.62 | |
| cd07408 | 257 | MPP_SA0022_N Staphylococcus aureus SA0022 and rela | 98.6 | |
| COG0622 | 172 | Predicted phosphoesterase [General function predic | 98.6 | |
| COG2908 | 237 | Uncharacterized protein conserved in bacteria [Fun | 98.59 | |
| cd07409 | 281 | MPP_CD73_N CD73 ecto-5'-nucleotidase and related p | 98.54 | |
| cd07382 | 255 | MPP_DR1281 Deinococcus radiodurans DR1281 and rela | 98.49 | |
| KOG3662 | 410 | consensus Cell division control protein/predicted | 98.49 | |
| PRK04036 | 504 | DNA polymerase II small subunit; Validated | 98.45 | |
| TIGR00619 | 253 | sbcd exonuclease SbcD. This family is based on the | 98.42 | |
| cd07386 | 243 | MPP_DNA_pol_II_small_archeal_C archeal DNA polymer | 98.37 | |
| PRK10966 | 407 | exonuclease subunit SbcD; Provisional | 98.34 | |
| cd07424 | 207 | MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase do | 98.33 | |
| cd07425 | 208 | MPP_Shelphs Shewanella-like phosphatases, metallop | 98.32 | |
| cd07405 | 285 | MPP_UshA_N Escherichia coli UshA and related prote | 98.3 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 98.3 | |
| TIGR00282 | 266 | metallophosphoesterase, MG_246/BB_0505 family. A m | 98.27 | |
| PRK11439 | 218 | pphA serine/threonine protein phosphatase 1; Provi | 98.23 | |
| PRK09968 | 218 | serine/threonine-specific protein phosphatase 2; P | 98.18 | |
| cd07407 | 282 | MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and | 98.18 | |
| COG0737 | 517 | UshA 5'-nucleotidase/2',3'-cyclic phosphodiesteras | 98.09 | |
| cd07380 | 150 | MPP_CWF19_N Schizosaccharomyces pombe CWF19 and re | 98.07 | |
| PRK09558 | 551 | ushA bifunctional UDP-sugar hydrolase/5'-nucleotid | 97.98 | |
| TIGR01530 | 550 | nadN NAD pyrophosphatase/5'-nucleotidase NadN. Thi | 97.94 | |
| cd08162 | 313 | MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA | 97.9 | |
| cd07391 | 172 | MPP_PF1019 Pyrococcus furiosus PF1019 and related | 97.81 | |
| PHA02239 | 235 | putative protein phosphatase | 97.73 | |
| KOG2310 | 646 | consensus DNA repair exonuclease MRE11 [Replicatio | 97.71 | |
| TIGR00024 | 225 | SbcD_rel_arch putative phosphoesterase, SbcD/Mre11 | 97.7 | |
| PRK11907 | 814 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.66 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.64 | |
| COG1311 | 481 | HYS2 Archaeal DNA polymerase II, small subunit/DNA | 97.63 | |
| PRK09418 | 780 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.6 | |
| PRK00166 | 275 | apaH diadenosine tetraphosphatase; Reviewed | 97.45 | |
| COG4186 | 186 | Predicted phosphoesterase or phosphohydrolase [Gen | 97.41 | |
| KOG2863 | 456 | consensus RNA lariat debranching enzyme [RNA proce | 97.38 | |
| cd07423 | 234 | MPP_PrpE Bacillus subtilis PrpE and related protei | 97.36 | |
| cd07390 | 168 | MPP_AQ1575 Aquifex aeolicus AQ1575 and related pro | 97.31 | |
| PRK13625 | 245 | bis(5'-nucleosyl)-tetraphosphatase PrpE; Provision | 97.27 | |
| cd07387 | 257 | MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2 | 97.24 | |
| TIGR01390 | 626 | CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphod | 97.22 | |
| PRK09420 | 649 | cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosp | 97.22 | |
| cd07413 | 222 | MPP_PA3087 Pseudomonas aeruginosa PA3087 and relat | 97.18 | |
| COG1692 | 266 | Calcineurin-like phosphoesterase [General function | 97.17 | |
| cd07421 | 304 | MPP_Rhilphs Rhilph phosphatases, metallophosphatas | 97.13 | |
| cd07381 | 239 | MPP_CapA CapA and related proteins, metallophospha | 97.06 | |
| cd00144 | 225 | MPP_PPP_family phosphoprotein phosphatases of the | 96.95 | |
| PF00041 | 85 | fn3: Fibronectin type III domain; InterPro: IPR003 | 96.87 | |
| cd07422 | 257 | MPP_ApaH Escherichia coli ApaH and related protein | 96.84 | |
| COG5555 | 392 | Cytolysin, a secreted calcineurin-like phosphatase | 96.84 | |
| TIGR00668 | 279 | apaH bis(5'-nucleosyl)-tetraphosphatase (symmetric | 96.68 | |
| PF09587 | 250 | PGA_cap: Bacterial capsule synthesis protein PGA_c | 96.55 | |
| COG1407 | 235 | Predicted ICC-like phosphoesterases [General funct | 96.5 | |
| smart00854 | 239 | PGA_cap Bacterial capsule synthesis protein PGA_ca | 96.45 | |
| PF13277 | 253 | YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C. | 96.44 | |
| KOG3325 | 183 | consensus Membrane coat complex Retromer, subunit | 96.18 | |
| cd07416 | 305 | MPP_PP2B PP2B, metallophosphatase domain. PP2B (ca | 95.55 | |
| cd07420 | 321 | MPP_RdgC Drosophila melanogaster RdgC and related | 95.5 | |
| smart00156 | 271 | PP2Ac Protein phosphatase 2A homologues, catalytic | 95.37 | |
| KOG4419 | 602 | consensus 5' nucleotidase [Nucleotide transport an | 95.24 | |
| cd07415 | 285 | MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein | 95.19 | |
| KOG3947 | 305 | consensus Phosphoesterases [General function predi | 95.12 | |
| cd07414 | 293 | MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzyme | 95.04 | |
| cd07418 | 377 | MPP_PP7 PP7, metallophosphatase domain. PP7 is a p | 94.99 | |
| PTZ00239 | 303 | serine/threonine protein phosphatase 2A; Provision | 94.76 | |
| PTZ00244 | 294 | serine/threonine-protein phosphatase PP1; Provisio | 94.23 | |
| PTZ00480 | 320 | serine/threonine-protein phosphatase; Provisional | 93.86 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 93.71 | |
| PF04042 | 209 | DNA_pol_E_B: DNA polymerase alpha/epsilon subunit | 92.68 | |
| cd07417 | 316 | MPP_PP5_C PP5, C-terminal metallophosphatase domai | 92.66 | |
| smart00060 | 83 | FN3 Fibronectin type 3 domain. One of three types | 92.38 | |
| cd07419 | 311 | MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase a | 91.78 | |
| cd00063 | 93 | FN3 Fibronectin type 3 domain; One of three types | 89.21 | |
| KOG4221 | 1381 | consensus Receptor mediating netrin-dependent axon | 87.34 | |
| KOG3513 | 1051 | consensus Neural cell adhesion molecule L1 [Signal | 83.5 |
| >PLN02533 probable purple acid phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-82 Score=635.69 Aligned_cols=406 Identities=58% Similarity=1.098 Sum_probs=360.2
Q ss_pred CCCCcccccccCCCCCccccC--CCCCCCCCeeEEEEecCCCcEEEEEEeCCCCCccEEEEeecCCCCceEEEeEeEEEe
Q 012895 26 SHVSAEEYYIRQPPRSVIQTP--NKRSESDPQQVHISLAAKDYIRVSWITDDKEAESVVEYGKLPGRYNTVATGEHTSYQ 103 (454)
Q Consensus 26 ~~~~~~~~~~r~~~~~~~~~~--~~~~~~~p~~v~l~~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~ 103 (454)
+.++++.+|+||+|+...... ..+....|+||||++++.++|+|+|.|.+. ..+.|+||++++.++.++.|+.++|+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~qvhls~~~~~~m~V~W~T~~~-~~~~V~yG~~~~~l~~~a~g~~~~~~ 92 (427)
T PLN02533 14 VLAGNVLSYDRPGTRKNLVIHPDNEDDPTHPDQVHISLVGPDKMRISWITQDS-IPPSVVYGTVSGKYEGSANGTSSSYH 92 (427)
T ss_pred hhccCcccccCCCccccccccccCCCCCCCCceEEEEEcCCCeEEEEEECCCC-CCCEEEEecCCCCCcceEEEEEEEEe
Confidence 345578999999988755322 236788999999999999999999999974 56899999999888889998888887
Q ss_pred ee-eeecCeEEEEEECCCCCCCEEEEEeCc--cCceeEEECCCCCCCeEEEEEecCCCCCChHHHHHHhhcCCCCeEeec
Q 012895 104 FF-FYKSGKIHHVKIGPLEPATTYYYRCGG--RGPEFSFKMPPANFPIEFAIVGDLGQTEWTNSTLDHVGSKDYDVFLLP 180 (454)
Q Consensus 104 ~~-~~~~~~~~~~~l~gL~p~t~Y~Yrv~~--~s~~~~F~T~p~~~~~~f~~igD~~~~~~~~~~l~~i~~~~pd~vl~~ 180 (454)
+. .+.++++|+|+|+||+|+|+|+|||+. .+++++|+|+|...++||+++||+|...+...+++++.+.+|||||++
T Consensus 93 ~~~~~~~g~iH~v~l~~L~p~T~Y~Yrvg~~~~s~~~~F~T~p~~~~~~f~v~GDlG~~~~~~~tl~~i~~~~pD~vl~~ 172 (427)
T PLN02533 93 YLLIYRSGQINDVVIGPLKPNTVYYYKCGGPSSTQEFSFRTPPSKFPIKFAVSGDLGTSEWTKSTLEHVSKWDYDVFILP 172 (427)
T ss_pred ccccccCCeEEEEEeCCCCCCCEEEEEECCCCCccceEEECCCCCCCeEEEEEEeCCCCcccHHHHHHHHhcCCCEEEEc
Confidence 52 356899999999999999999999995 467899999998889999999999988777889999988999999999
Q ss_pred CccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCCCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEE
Q 012895 181 GDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHI 260 (454)
Q Consensus 181 GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~f 260 (454)
||++|++..+..|+.|.+.++++.+.+|+++++||||....+......+..|.++|.||.++.+...+.||+|++|++||
T Consensus 173 GDl~y~~~~~~~wd~f~~~i~~l~s~~P~m~~~GNHE~~~~~~~~~~~f~~y~~rf~mP~~~~g~~~~~yYSfd~g~vhf 252 (427)
T PLN02533 173 GDLSYANFYQPLWDTFGRLVQPLASQRPWMVTHGNHELEKIPILHPEKFTAYNARWRMPFEESGSTSNLYYSFNVYGVHI 252 (427)
T ss_pred CccccccchHHHHHHHHHHhhhHhhcCceEEeCccccccccccccCcCccchhhcccCCccccCCCCCceEEEEECCEEE
Confidence 99999988888999999999999888999999999999754432234677888999999876666678999999999999
Q ss_pred EEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCC--cHHHHHHHHHHHHhcCCcEEEecccc
Q 012895 261 IMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGE--GESMRNSMEELLYNARVDVVFAGHVH 338 (454)
Q Consensus 261 i~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~--~~~~~~~l~~ll~~~~v~lvl~GH~H 338 (454)
|+||++.++....+|++||+++|++.+++++||+|+++|+|+|++...+.+. ...+++.|+++|.+++||++|+||+|
T Consensus 253 I~Lds~~~~~~~~~Q~~WLe~dL~~~~r~~~pwiIv~~H~P~y~s~~~~~~~~~~~~~r~~le~Ll~~~~VdlvlsGH~H 332 (427)
T PLN02533 253 IMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQGEKESVGMKESMETLLYKARVDLVFAGHVH 332 (427)
T ss_pred EEEeCCccccCchHHHHHHHHHHHhhcccCCCEEEEEeCCCeeecccccCCcchhHHHHHHHHHHHHHhCCcEEEeccee
Confidence 9999998877789999999999999887778999999999999876554333 23578899999999999999999999
Q ss_pred cceeeecccCCCcCCCCcEEEEECCCCCCCCcccccCCCCCCCceeeecccCEEEEEEecCCeEEEEEEEecCCCceeee
Q 012895 339 AYERFTRIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQESSFGHARLKILDETRAHWSWYRNNDSDAVIAD 418 (454)
Q Consensus 339 ~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~~~~~~~~~~dg~~~~~D 418 (454)
.|+|+.|+++++.+++|++||++|+||+.+++...+..++|+|++|++.+|||++|+|.|.||+.|+|++++|++.++.|
T Consensus 333 ~YeR~~p~~~~~~~~~gpvyiv~G~gG~~e~~~~~~~~~~~~~s~~r~~~~G~~~l~v~n~t~l~~~~~~~~~~~~~~~D 412 (427)
T PLN02533 333 AYERFDRVYQGKTDKCGPVYITIGDGGNREGLATKYIDPKPDISLFREASFGHGQLNVVDANTMEWTWHRNDDDQSVASD 412 (427)
T ss_pred cccccccccCCccCCCCCEEEEeCCCccccccccccCCCCCCceeEEeccCCEEEEEEEcCCeEEEEEEecCCCCceeee
Confidence 99999999999999999999999999999987667888899999999999999999999999999999999999889999
Q ss_pred EEEEEEcCCCCCCC
Q 012895 419 EVRLESLSTSKQCW 432 (454)
Q Consensus 419 ~~~i~~~~~~~~~~ 432 (454)
+|||+|....++|.
T Consensus 413 ~~~i~~~~~~~~~~ 426 (427)
T PLN02533 413 SVWLKSLLTEPGCN 426 (427)
T ss_pred EEEEEeccCCCccC
Confidence 99999998889996
|
|
| >KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-77 Score=579.96 Aligned_cols=397 Identities=43% Similarity=0.678 Sum_probs=344.7
Q ss_pred CCCCCcccccccCCCCCccccCC-------CCCCCCCeeEEEEecC-CCcEEEEEEeCCCCCccEEEEeecCCC-----C
Q 012895 25 HSHVSAEEYYIRQPPRSVIQTPN-------KRSESDPQQVHISLAA-KDYIRVSWITDDKEAESVVEYGKLPGR-----Y 91 (454)
Q Consensus 25 ~~~~~~~~~~~r~~~~~~~~~~~-------~~~~~~p~~v~l~~~~-~~~~~v~W~t~~~~~~~~v~y~~~~~~-----~ 91 (454)
.+.++.+....|+. .+...++. +.....|+||||++++ .++|+|+|.|.+. ..+.|+|++.... .
T Consensus 10 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~peQvhlS~~~~~~~m~VswvT~~~-~~~~V~Yg~~~~~~~~~~~ 87 (452)
T KOG1378|consen 10 EINPKHTLHDINPL-PGTLHLLSESEQLTFPSVVNSPEQVHLSFTDNLNEMRVSWVTGDG-EENVVRYGEVKDKLDNSAA 87 (452)
T ss_pred eccCCCcccccccc-CcccccccccccccCcccCCCCCeEEEeccCCCCcEEEEEeCCCC-CCceEEEeecCCCcccccc
Confidence 34566677777776 44433333 3568899999999999 6699999999974 3489999977554 2
Q ss_pred ceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEeCcc---CceeEEECCCC-CCCeEEEEEecCCCCCChHHHHH
Q 012895 92 NTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCGGR---GPEFSFKMPPA-NFPIEFAIVGDLGQTEWTNSTLD 167 (454)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv~~~---s~~~~F~T~p~-~~~~~f~~igD~~~~~~~~~~l~ 167 (454)
+..+.+.+..|.+.++.++++|+|.+++|+|+|+||||||++ |++|+|+|||. ..+.+|+++||+|...+...++.
T Consensus 88 ~~~~~~~~~~y~~~~~~sg~ih~~~~~~L~~~t~YyY~~Gs~~~wS~~f~F~t~p~~~~~~~~~i~GDlG~~~~~~s~~~ 167 (452)
T KOG1378|consen 88 RGMTEAWTDGYANGWRDSGYIHDAVMKNLEPNTRYYYQVGSDLKWSEIFSFKTPPGQDSPTRAAIFGDMGCTEPYTSTLR 167 (452)
T ss_pred ccceEEEecccccccceeeeEeeeeecCCCCCceEEEEeCCCCCcccceEeECCCCccCceeEEEEccccccccccchHh
Confidence 334445555566666799999999999999999999999973 68999999995 68999999999999988877777
Q ss_pred Hhhc-CCCCeEeecCccccCCCCh-hhHHHHhhhhhhhhcCCCeeecCCCcccCCCCCCCcchhhhhhhhccCCCCCCCC
Q 012895 168 HVGS-KDYDVFLLPGDLSYADFQQ-PLWDSFGRLVEPYASSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEESGS 245 (454)
Q Consensus 168 ~i~~-~~pd~vl~~GDl~y~~~~~-~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 245 (454)
.+.. .++|+|||.|||+|++... .+||.|.++++++++.+|++++.||||++..+. ..|..|.++|.||.+++++
T Consensus 168 ~~~~~~k~d~vlhiGDlsYa~~~~n~~wD~f~r~vEp~As~vPymv~~GNHE~d~~~~---~~F~~y~~Rf~mP~~~s~s 244 (452)
T KOG1378|consen 168 NQEENLKPDAVLHIGDLSYAMGYSNWQWDEFGRQVEPIASYVPYMVCSGNHEIDWPPQ---PCFVPYSARFNMPGNSSES 244 (452)
T ss_pred HHhcccCCcEEEEecchhhcCCCCccchHHHHhhhhhhhccCceEEecccccccCCCc---ccccccceeeccCCCcCCC
Confidence 7764 4699999999999999988 699999999999999999999999999987654 2689999999999988887
Q ss_pred CCCceEEEEeCeEEEEEecccCCC--CCCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCC-CCCCcH--HHHHHH
Q 012895 246 SSNLYYSFDIAGAHIIMLGSYTDF--DEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTA-HQGEGE--SMRNSM 320 (454)
Q Consensus 246 ~~~~~ys~~~g~v~fi~Lds~~~~--~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~-~~~~~~--~~~~~l 320 (454)
..++||||++|++|||+|+|+.++ ..+.+|.+||+++|++++++++||+|++.|.|+|++... +..++. .+|..|
T Consensus 245 ~~~l~YSfd~G~vhfv~lsse~~~~~~~~~~QY~WL~~dL~~v~r~~tPWlIv~~HrP~Y~S~~~~~~reG~~~~~~~~L 324 (452)
T KOG1378|consen 245 DSNLYYSFDVGGVHFVVLSTETYYNFLKGTAQYQWLERDLASVDRKKTPWLIVQGHRPMYCSSNDAHYREGEFESMREGL 324 (452)
T ss_pred CCceeEEEeeccEEEEEEeccccccccccchHHHHHHHHHHHhcccCCCeEEEEecccceecCCchhhccCcchhhHHHH
Confidence 778999999999999999998774 356899999999999999865899999999999998875 555555 788999
Q ss_pred HHHHHhcCCcEEEecccccceeeecccCCCc----------CCCCcEEEEECCCCCCCCcccccCCCCCCCceeeecccC
Q 012895 321 EELLYNARVDVVFAGHVHAYERFTRIYDNKA----------DPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQESSFG 390 (454)
Q Consensus 321 ~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~----------~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G 390 (454)
+++|.+++||++|+||+|.|||++|++|.+. ++++|+||++|+||+.+++.. +..++|+|++||+.+||
T Consensus 325 E~l~~~~~VDvvf~GHvH~YER~~piyn~~~~~~~~~~~~~d~~aPvyI~~G~~G~~e~~~~-~~~~~p~~Sa~R~~dfG 403 (452)
T KOG1378|consen 325 EPLFVKYKVDVVFWGHVHRYERFCPIYNNTCGTGWGPVHLVDGMAPIYITVGDGGNHEHLDP-FSSPQPEWSAFREGDFG 403 (452)
T ss_pred HHHHHHhceeEEEeccceehhccchhhcceeeccCCcccccCCCCCEEEEEccCCcccccCc-ccCCCCcccccccccCC
Confidence 9999999999999999999999999999765 889999999999999998764 44589999999999999
Q ss_pred EEEEEEecCCeEEEEEEEecCCCceeeeEEEEEEcCC
Q 012895 391 HARLKILDETRAHWSWYRNNDSDAVIADEVRLESLST 427 (454)
Q Consensus 391 ~~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i~~~~~ 427 (454)
|++|++.|+||+.|+|+++.|+++++.|+|||.|+..
T Consensus 404 ~~~L~v~N~TH~~~~~~~~~d~~g~~~D~fwl~k~~~ 440 (452)
T KOG1378|consen 404 YTRLTAKNGTHAHVHWVRNSDASGVVIDSFWLIKDYR 440 (452)
T ss_pred eEEEEEecCceEEEEEEeccCCCceEeeeEEEEcccC
Confidence 9999999999999999999999999999999999965
|
|
| >cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-46 Score=363.71 Aligned_cols=275 Identities=45% Similarity=0.803 Sum_probs=220.2
Q ss_pred CCCeEEEEEecCCCC-CChHHHHHHhhc--CCCCeEeecCccccCCCCh--hhHHHHhhhhhhhhcCCCeeecCCCcccC
Q 012895 145 NFPIEFAIVGDLGQT-EWTNSTLDHVGS--KDYDVFLLPGDLSYADFQQ--PLWDSFGRLVEPYASSRPWMVTEGNHEIE 219 (454)
Q Consensus 145 ~~~~~f~~igD~~~~-~~~~~~l~~i~~--~~pd~vl~~GDl~y~~~~~--~~~~~~~~~~~~l~~~~P~~~v~GNHD~~ 219 (454)
+.++||+++||+|.. ....++++.+.+ .+|||||++||++|+++.. .+|+.|.+.++++...+|+++++||||..
T Consensus 2 ~~~~~f~v~gD~~~~~~~~~~~~~~l~~~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 81 (294)
T cd00839 2 DTPFKFAVFGDMGQNTNNSTNTLDHLEKELGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASYVPYMVTPGNHEAD 81 (294)
T ss_pred CCcEEEEEEEECCCCCCCcHHHHHHHHhccCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhcCCcEEcCcccccc
Confidence 468999999999973 456778888865 7999999999999987664 78999999999998889999999999996
Q ss_pred CCCCCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCC---CCCHHHHHHHHHHHHhhccCCCCeEEE
Q 012895 220 SIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDF---DEDSAQYKWLKADLAKINRKKTPWIFV 296 (454)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~---~~~~~Q~~WL~~~L~~~~~~~~~w~Iv 296 (454)
...... ....+..++.++........+.||+|++|+++||+|||.... ....+|++||+++|+++++++.+|+||
T Consensus 82 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~~~~q~~WL~~~L~~~~~~~~~~~iv 159 (294)
T cd00839 82 YNFSFY--KIKAFFPRFRFPHSPSGSTSNLWYSFDVGPVHFVSLSTEVDFYGDGPGSPQYDWLEADLAKVDRSKTPWIIV 159 (294)
T ss_pred cCCCCc--ccccccccccccCCCCCCCCCceEEEeeCCEEEEEEecccccccCCCCcHHHHHHHHHHHHhcccCCCeEEE
Confidence 543210 111111122233322233457899999999999999998654 467999999999999987656789999
Q ss_pred EEccccccCCCCCCC--CcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCC--------cCCCCcEEEEECCCCC
Q 012895 297 LLHAPWYNTNTAHQG--EGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNK--------ADPCGPIYITIGDGGN 366 (454)
Q Consensus 297 ~~H~P~~~~~~~~~~--~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~--------~~~~g~~yi~~G~gG~ 366 (454)
++|+|++........ .....++.|.++|++++|+++|+||+|.|+|++|+++++ .+++|++||++|+||+
T Consensus 160 ~~H~P~~~~~~~~~~~~~~~~~~~~l~~ll~~~~v~~vl~GH~H~y~r~~p~~~~~~~~~~~~~~~~~g~~yiv~G~~G~ 239 (294)
T cd00839 160 MGHRPMYCSNTDHDDCIEGEKMRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVVGDCNPYSNPKGPVHIVIGAGGN 239 (294)
T ss_pred EeccCcEecCccccccchhHHHHHHHHHHHHHhCCCEEEEccceeeEeechhhCCEeccccccccCCCccEEEEECCCcc
Confidence 999999987654322 234678999999999999999999999999999988754 4678999999999999
Q ss_pred CCCcccccCCCCCCCceeeecccCEEEEEEecCCeEEEEEEEecCCCceeeeEEEEEE
Q 012895 367 REGLALEFKEPKSPLSMFQESSFGHARLKILDETRAHWSWYRNNDSDAVIADEVRLES 424 (454)
Q Consensus 367 ~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i~~ 424 (454)
..+..... .+.++|++++...+||++|++.+.|+|+++|+++.+|+ ++|+|+|.|
T Consensus 240 ~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~t~l~~~~~~~~~g~--v~D~f~i~k 294 (294)
T cd00839 240 DEGLDPFS-APPPAWSAFRESDYGFGRLTVHNSTHLHFEWIRNDDGV--VIDSFWIIK 294 (294)
T ss_pred ccCcCccc-CCCCCceEEEeccCCEEEEEEEecCeEEEEEEECCCCe--EEEEEEEeC
Confidence 86532212 13368899999999999999999889999999988886 999999986
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver |
| >PTZ00422 glideosome-associated protein 50; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-34 Score=277.17 Aligned_cols=257 Identities=17% Similarity=0.283 Sum_probs=189.1
Q ss_pred CCCeEEEEEecCCCCCChHHHHHH-h----hcCCCCeEeecCccccCCCC---hhhHHH-Hhhhhhhhh--cCCCeeecC
Q 012895 145 NFPIEFAIVGDLGQTEWTNSTLDH-V----GSKDYDVFLLPGDLSYADFQ---QPLWDS-FGRLVEPYA--SSRPWMVTE 213 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~~~~~l~~-i----~~~~pd~vl~~GDl~y~~~~---~~~~~~-~~~~~~~l~--~~~P~~~v~ 213 (454)
...++|+++||+|.+...+..+++ | +..++||||.+||+++.+.. +++|+. |.+...... ..+||++++
T Consensus 24 ~~~l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~Pwy~vL 103 (394)
T PTZ00422 24 KAQLRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQIPFFTVL 103 (394)
T ss_pred CCeEEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhhCCCeEEeC
Confidence 788999999999976655554433 2 36799999999999843322 566765 444444333 358999999
Q ss_pred CCcccCCCCCCCcchhh------------------hhhhhccCCCCCCCCCCCceEEE----Ee-------------CeE
Q 012895 214 GNHEIESIPIILPHAFK------------------AYNARWLMPYEESGSSSNLYYSF----DI-------------AGA 258 (454)
Q Consensus 214 GNHD~~~~~~~~~~~~~------------------~~~~~~~~p~~~~~~~~~~~ys~----~~-------------g~v 258 (454)
||||+..+...+...+. ....+|.||. .||.+ .. ..+
T Consensus 104 GNHDy~Gn~~AQi~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP~--------~yY~~~~~f~~~~~~~~~~~~~~~~~v 175 (394)
T PTZ00422 104 GQADWDGNYNAELLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMPN--------YWYHYFTHFTDTSGPSLLKSGHKDMSV 175 (394)
T ss_pred CcccccCCchhhhccccccccccccccccccccccccCCCccCCc--------hhheeeeeeecccccccccccCCCCEE
Confidence 99999765543211111 1135788884 67754 21 128
Q ss_pred EEEEecccCC-----C-CCCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEE
Q 012895 259 HIIMLGSYTD-----F-DEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVV 332 (454)
Q Consensus 259 ~fi~Lds~~~-----~-~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lv 332 (454)
.||++||... + .....|++||+++|+.+.+ .++|+||++|||+|+++.. +....++..|+++|++|+||++
T Consensus 176 ~fifiDT~~l~~~~~~~~~~~~~w~~L~~~L~~a~k-~a~WkIVvGHhPIySsG~h--g~~~~L~~~L~PLL~ky~VdlY 252 (394)
T PTZ00422 176 AFIFIDTWILSSSFPYKKVSERAWQDLKATLEYAPK-IADYIIVVGDKPIYSSGSS--KGDSYLSYYLLPLLKDAQVDLY 252 (394)
T ss_pred EEEEEECchhcccCCccccCHHHHHHHHHHHHhhcc-CCCeEEEEecCceeecCCC--CCCHHHHHHHHHHHHHcCcCEE
Confidence 9999999532 1 1247899999999976543 6789999999999998753 2334688899999999999999
Q ss_pred EecccccceeeecccCCCcCCCCcEEEEECCCCCCCCcccccCCCCCCCceeeecccCEEEEEEecCCeEEEEEEEecCC
Q 012895 333 FAGHVHAYERFTRIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQESSFGHARLKILDETRAHWSWYRNNDS 412 (454)
Q Consensus 333 l~GH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~~~~~~~~~~dg 412 (454)
|+||+|.+|+.. .+++.||++|+||+..+.. . ..++++.|.....||..+++ +.+.+.++|++..+|
T Consensus 253 isGHDH~lq~i~--------~~gt~yIvSGaGs~~~~~~--~--~~~~~s~F~~~~~GF~~~~l-~~~~l~~~fid~~~G 319 (394)
T PTZ00422 253 ISGYDRNMEVLT--------DEGTAHINCGSGGNSGRKS--I--MKNSKSLFYSEDIGFCIHEL-NAEGMVTKFVSGNTG 319 (394)
T ss_pred EEccccceEEec--------CCCceEEEeCccccccCCC--C--CCCCCcceecCCCCEEEEEE-ecCEEEEEEEeCCCC
Confidence 999999999975 3589999999998754321 1 22455888888999999997 567999999976678
Q ss_pred CceeeeEEEEEEcCC
Q 012895 413 DAVIADEVRLESLST 427 (454)
Q Consensus 413 ~~~~~D~~~i~~~~~ 427 (454)
+ +++++++.++..
T Consensus 320 k--vL~~~~~~~~~~ 332 (394)
T PTZ00422 320 E--VLYTHKQPLKKR 332 (394)
T ss_pred c--EEEEeeecccch
Confidence 7 999999987754
|
|
| >cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-32 Score=262.58 Aligned_cols=240 Identities=22% Similarity=0.385 Sum_probs=171.9
Q ss_pred eEEEEEecCCCCC-ChH-HH---HHH-hhcCCCCeEeecCccccCCCC----hhhH-HHHhhhhhhhhcCCCeeecCCCc
Q 012895 148 IEFAIVGDLGQTE-WTN-ST---LDH-VGSKDYDVFLLPGDLSYADFQ----QPLW-DSFGRLVEPYASSRPWMVTEGNH 216 (454)
Q Consensus 148 ~~f~~igD~~~~~-~~~-~~---l~~-i~~~~pd~vl~~GDl~y~~~~----~~~~-~~~~~~~~~l~~~~P~~~v~GNH 216 (454)
++|+++||+|... ..+ .+ +.. +++.+|||||++||++|+++. ...| +.|.+.+..+...+|+++++|||
T Consensus 1 ~~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNH 80 (277)
T cd07378 1 LRFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPSLQVPWYLVLGNH 80 (277)
T ss_pred CeEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchhhcCCeEEecCCc
Confidence 5899999999852 222 22 222 235799999999999987764 2233 34555555454569999999999
Q ss_pred ccCCCCCCCcchhhh--hhhhccCCCCCCCCCCCceEEEEeC------eEEEEEecccCCC---------------CCCH
Q 012895 217 EIESIPIILPHAFKA--YNARWLMPYEESGSSSNLYYSFDIA------GAHIIMLGSYTDF---------------DEDS 273 (454)
Q Consensus 217 D~~~~~~~~~~~~~~--~~~~~~~p~~~~~~~~~~~ys~~~g------~v~fi~Lds~~~~---------------~~~~ 273 (454)
|+..+.... ..+.. +..+|.+| ..||+|+++ +++||+|||.... ..+.
T Consensus 81 D~~~~~~~~-~~~~~~~~~~~~~~~--------~~~y~~~~~~~~~~~~~~~i~LDt~~~~~~~~~~~~~~~~~~~~~~~ 151 (277)
T cd07378 81 DYSGNVSAQ-IDYTKRPNSPRWTMP--------AYYYRVSFPFPSSDTTVEFIMIDTVPLCGNSDDIASPYGPPNGKLAE 151 (277)
T ss_pred ccCCCchhe-eehhccCCCCCccCc--------chheEEEeecCCCCCEEEEEEEeChhHcCccccccccccCcchhhHH
Confidence 996432100 01111 12233333 479999988 7999999996421 1358
Q ss_pred HHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCCcCC
Q 012895 274 AQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADP 353 (454)
Q Consensus 274 ~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~ 353 (454)
+|++||+++|+++. .+|+||++|+|+++..... .....++.|.+++++++|+++|+||+|.+++..+ +.
T Consensus 152 ~Q~~wL~~~L~~~~---~~~~iv~~H~P~~~~~~~~--~~~~~~~~l~~l~~~~~v~~vl~GH~H~~~~~~~------~~ 220 (277)
T cd07378 152 EQLAWLEKTLAAST---ADWKIVVGHHPIYSSGEHG--PTSCLVDRLLPLLKKYKVDAYLSGHDHNLQHIKD------DG 220 (277)
T ss_pred HHHHHHHHHHHhcC---CCeEEEEeCccceeCCCCC--CcHHHHHHHHHHHHHcCCCEEEeCCcccceeeec------CC
Confidence 99999999999874 3799999999998765322 2245788999999999999999999999998764 13
Q ss_pred CCcEEEEECCCCCCCCcccccCCCCCCCceeeecccCEEEEEEecCCeEEEEEEE
Q 012895 354 CGPIYITIGDGGNREGLALEFKEPKSPLSMFQESSFGHARLKILDETRAHWSWYR 408 (454)
Q Consensus 354 ~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~~~~~~~~ 408 (454)
.++.||++|+||...+.........|.|..++...+||.+|+|.+ ..+.++|+.
T Consensus 221 ~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~Gy~~i~v~~-~~l~~~~~~ 274 (277)
T cd07378 221 SGTSFVVSGAGSKARPSVKHIDKVPQFFSGFTSSGGGFAYLELTK-EELTVRFYD 274 (277)
T ss_pred CCcEEEEeCCCcccCCCCCccCcccccccccccCCCCEEEEEEec-CEEEEEEEC
Confidence 589999999998876543222222345678888899999999965 599999986
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma |
| >cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-28 Score=233.36 Aligned_cols=227 Identities=20% Similarity=0.311 Sum_probs=161.2
Q ss_pred CCCeEEEEEecCCCCCC-----------------hHHHHHHhhcC--CCCeEeecCccccCCCCh----hhHHHHhhhhh
Q 012895 145 NFPIEFAIVGDLGQTEW-----------------TNSTLDHVGSK--DYDVFLLPGDLSYADFQQ----PLWDSFGRLVE 201 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~-----------------~~~~l~~i~~~--~pd~vl~~GDl~y~~~~~----~~~~~~~~~~~ 201 (454)
+.+++|+++||+|.+.. .+.+++.+.+. +||+||++||+++.+... .+|+.+.+.++
T Consensus 2 ~~~~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~ 81 (262)
T cd07395 2 SGPFYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLS 81 (262)
T ss_pred CCCEEEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHh
Confidence 46899999999987631 12345556555 999999999999876543 34556666666
Q ss_pred hhhcCCCeeecCCCcccCCCCCCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCC------CCCHHH
Q 012895 202 PYASSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDF------DEDSAQ 275 (454)
Q Consensus 202 ~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~------~~~~~Q 275 (454)
.+...+|+++++||||+...+. ...+..|...|. ..||++++++++||+|||.... ....+|
T Consensus 82 ~~~~~vp~~~i~GNHD~~~~~~--~~~~~~f~~~~g----------~~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~q 149 (262)
T cd07395 82 LLDPDIPLVCVCGNHDVGNTPT--EESIKDYRDVFG----------DDYFSFWVGGVFFIVLNSQLFFDPSEVPELAQAQ 149 (262)
T ss_pred hccCCCcEEEeCCCCCCCCCCC--hhHHHHHHHHhC----------CcceEEEECCEEEEEeccccccCccccccchHHH
Confidence 6655689999999999954332 122334443332 3588999999999999985421 235799
Q ss_pred HHHHHHHHHhhccCCCCeEEEEEccccccCCCCCC----CCcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCCc
Q 012895 276 YKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQ----GEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKA 351 (454)
Q Consensus 276 ~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~----~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~ 351 (454)
++||+++|+++++.+.+++||++|+|++....... ......+++|.++|++++|+++||||+|.+....
T Consensus 150 l~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~v~~GH~H~~~~~~------- 222 (262)
T cd07395 150 DVWLEEQLEIAKESDCKHVIVFQHIPWFLEDPDEEDSYFNIPKSVRKPLLDKFKKAGVKAVFSGHYHRNAGGR------- 222 (262)
T ss_pred HHHHHHHHHHHHhccCCcEEEEECcCCccCCCCCCcccCCcCHHHHHHHHHHHHhcCceEEEECccccCCceE-------
Confidence 99999999998643456899999999986443211 1223568899999999999999999999977643
Q ss_pred CCCCcEEEEECCCCCCCCcccccCCCCCCCceeeecccCEEEEEEecCCeEEEEEEE
Q 012895 352 DPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQESSFGHARLKILDETRAHWSWYR 408 (454)
Q Consensus 352 ~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~~~~~~~~ 408 (454)
..|+.|+++++.|.. +.. ...||..+++.. ..+.++|+.
T Consensus 223 -~~g~~~~~~~~~~~~------~~~----------~~~g~~~~~v~~-~~~~~~~~~ 261 (262)
T cd07395 223 -YGGLEMVVTSAIGAQ------LGN----------DKSGLRIVKVTE-DKIVHEYYS 261 (262)
T ss_pred -ECCEEEEEcCceecc------cCC----------CCCCcEEEEECC-Cceeeeeee
Confidence 137778877776642 111 235888999854 456787763
|
CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th |
| >PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: |
Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-27 Score=246.00 Aligned_cols=340 Identities=20% Similarity=0.260 Sum_probs=176.2
Q ss_pred EEecC-CCcEEEEEEeCCC----------CCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 59 ISLAA-KDYIRVSWITDDK----------EAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 59 l~~~~-~~~~~v~W~t~~~----------~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
|++|+ ..+.+|.|.+... +....+++.+++........+...+- ...++++++.|+||+|+|+|+
T Consensus 3 vasGdp~~~svilWtR~~~~~~~~~~~~~~~~V~~~va~d~~~~~~~~~~~~~~~----~~~d~t~~v~v~gL~p~t~Y~ 78 (453)
T PF09423_consen 3 VASGDPTPDSVILWTRVTPPAAAGGMPKAPVPVRWEVATDPEFSNVVRSGTVTTT----AERDFTVKVDVTGLQPGTRYY 78 (453)
T ss_dssp EEEE---SS-EEEEEE--SBGGTB---SS-EEEEEEEESSTTSSSEEEEEEEEE-----GGGTTEEEEEE-S--TT-EEE
T ss_pred ccccCCCCCEEEEEEEecCcccCCCCCCCcEEEEEEEECCCCccceEEecceecc----cCCCeEeecccCCCCCCceEE
Confidence 77888 6667778988865 34556667766666555555554332 267899999999999999999
Q ss_pred EEeCc-----cCceeEEECCCC--CCCeEEEEEecCCCCCChHHHHHHhhc-CCCCeEeecCccccCCCC----------
Q 012895 128 YRCGG-----RGPEFSFKMPPA--NFPIEFAIVGDLGQTEWTNSTLDHVGS-KDYDVFLLPGDLSYADFQ---------- 189 (454)
Q Consensus 128 Yrv~~-----~s~~~~F~T~p~--~~~~~f~~igD~~~~~~~~~~l~~i~~-~~pd~vl~~GDl~y~~~~---------- 189 (454)
||+.. .+..++|+|+|. ...+||++.||.+.......+++.|.+ .+|||+||+||.+|.+..
T Consensus 79 Y~~~~~~~~~~s~~g~~rT~p~~~~~~~r~a~~SC~~~~~~~~~~~~~~a~~~~~D~~l~lGD~IY~d~~~~~~~~~~~~ 158 (453)
T PF09423_consen 79 YRFVVDGGGQTSPVGRFRTAPDGDPDPFRFAFGSCQNYEDGYFPAYRRIAERDDPDFVLHLGDQIYEDGGGGYGNLSRRP 158 (453)
T ss_dssp EEEEE--TTEE---EEEE--TT-----EEEEEE----CCC---HHHHHHTT-S--SEEEE-S-SS----TTSS--TT---
T ss_pred EEEEEecCCCCCCceEEEcCCCCCCCceEEEEECCCCcccChHHHHHhhhccCCCcEEEEeCCeeeccCCcccccccccc
Confidence 99875 357899999986 357999999999875555788899987 699999999999998852
Q ss_pred -----------------hhhHHHH--hhhhhhhhcCCCeeecCCCcccCCCCCCC----------------cchhhhhhh
Q 012895 190 -----------------QPLWDSF--GRLVEPYASSRPWMVTEGNHEIESIPIIL----------------PHAFKAYNA 234 (454)
Q Consensus 190 -----------------~~~~~~~--~~~~~~l~~~~P~~~v~GNHD~~~~~~~~----------------~~~~~~~~~ 234 (454)
...|..+ ...++.+.+.+|+++++.+||+.++.... ...+..|.+
T Consensus 159 ~~r~~~p~~~~~~l~~yR~~y~~~~~~p~l~~~~~~~P~~~iwDDHdi~nn~~~~~~~~~~~~~~~~~~~~~~a~~ay~e 238 (453)
T PF09423_consen 159 IGRAPEPAHEAETLDDYRRRYRQYRSDPDLRRLHANVPWIMIWDDHDIGNNWWGDGAENHQDTSGDFQDRRRAAYQAYFE 238 (453)
T ss_dssp S-----SSSS--SHHHHHHHHHHHHT-HHHHHHHHHSEEEE---STTTSTT-BTTB-STT---HHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccHHHHHHHHHHHcCCHHHHHHhhcccEEEEccCceecccccCCccccccccccchHHHHHHHHHHHHh
Confidence 0112111 13455566779999999999997554310 011223333
Q ss_pred hccCCCCC-CCCCCCceEEEEeCe-EEEEEecccCCC---------------------CCCHHHHHHHHHHHHhhccCCC
Q 012895 235 RWLMPYEE-SGSSSNLYYSFDIAG-AHIIMLGSYTDF---------------------DEDSAQYKWLKADLAKINRKKT 291 (454)
Q Consensus 235 ~~~~p~~~-~~~~~~~~ys~~~g~-v~fi~Lds~~~~---------------------~~~~~Q~~WL~~~L~~~~~~~~ 291 (454)
+.+..... .+.....|++|.+|+ +.|++||+.... ..+.+|++||++.|.+. .+
T Consensus 239 ~~p~r~~~~~~~~~~~y~~~~~G~~~~~~~LD~R~~R~~~~~~~~~~~~~~~~~~~~~mLG~~Q~~wL~~~L~~s---~a 315 (453)
T PF09423_consen 239 YQPVRNPDPPGDQGRIYRSFRYGDLVEFFMLDTRSYRSPPPCDGPGDTCPAADDPSRTMLGEEQWDWLEDWLASS---QA 315 (453)
T ss_dssp HS---GGG-BTTB----EEEEETTTEEEEE--SSSS----CCCSSEE--HHHH-TT--SS-HHHHHHHHHHHHH-----S
T ss_pred hcCccCCCccCCCCceEEEEecCCceeEEEEechhccccccccccccccccccCCccCcCCHHHHHHHHHHHhcC---CC
Confidence 33222111 122346799999999 999999985321 13789999999999987 47
Q ss_pred CeEEEEEccccccCCCCC-----------CCCcHHHHHHHHHHHHhcCCc--EEEecccccceeeecccCCC--cCCC-C
Q 012895 292 PWIFVLLHAPWYNTNTAH-----------QGEGESMRNSMEELLYNARVD--VVFAGHVHAYERFTRIYDNK--ADPC-G 355 (454)
Q Consensus 292 ~w~Iv~~H~P~~~~~~~~-----------~~~~~~~~~~l~~ll~~~~v~--lvl~GH~H~y~r~~~~~~~~--~~~~-g 355 (454)
+|+||+.-.|+....... ...-...|++|.++|.+.++. ++|+|++|......-..+.. .... .
T Consensus 316 ~~kvi~s~v~~~~~~~~~~~~~~~~~~d~W~g~~~er~~Ll~~l~~~~~~~vV~LSGDvH~~~~~~~~~~~~~~~~~~~~ 395 (453)
T PF09423_consen 316 TWKVIGSSVPFSPLNFPDAAEGLPFNMDSWDGYPAERQRLLDFLRESGIRNVVFLSGDVHASAASRIPPDDADPPDGPGS 395 (453)
T ss_dssp SEEEEE-SS--S---SS-SS-S--EETTSGGGSHHHHHHHHHHHHHTT---EEEEE-SSSSEEEEEEESSTT---TTS-E
T ss_pred cEEEEEeCCceecccccccccccccCCCchhhCHHHHHHHHHHHHhhCCCCEEEEecCcchheeeecccccccccCCCCC
Confidence 899999988875432211 111235789999999888764 89999999965544222211 0111 1
Q ss_pred c-EEEEECCCCCCC-Cc------ccccCCCCCCCceeeecccCEEEEEEecCCeEEEEE
Q 012895 356 P-IYITIGDGGNRE-GL------ALEFKEPKSPLSMFQESSFGHARLKILDETRAHWSW 406 (454)
Q Consensus 356 ~-~yi~~G~gG~~~-~~------~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~~~~~~ 406 (454)
+ +-+++++=.+.. ++ ...+...+|...-++...+||..|++. ...++.+|
T Consensus 396 ~~~Ef~~s~vts~~~~~~~~~~~~~~~~~~np~~~~~~~~~~G~~~i~~~-~~~~~~~~ 453 (453)
T PF09423_consen 396 VGVEFTSSSVTSPGFGLGTSPALDRALDKANPHLKFADLRNFGYVEIDIT-PERVTAEW 453 (453)
T ss_dssp EEEEEE---SSTT-S-BSB-TTHHH-HHHH-TTEEEEE-B-EEEEEEEEE-TTEEEEEE
T ss_pred eEEEEECCCccCCCcccccchhhhhhhhhcCCceEEeECCCCcEEEEEEc-cceEEEEC
Confidence 2 223333211111 00 001112245534445578999999984 46777765
|
|
| >COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=238.66 Aligned_cols=277 Identities=21% Similarity=0.304 Sum_probs=203.8
Q ss_pred eeEEEEecC-CCcEEEEEEeCCC-------CCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEE
Q 012895 55 QQVHISLAA-KDYIRVSWITDDK-------EAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 55 ~~v~l~~~~-~~~~~v~W~t~~~-------~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 126 (454)
.+..|++|| .....|.|.+-++ +.+..+|+++++.+.+.+..++..+.. ..++.+++.++||+|++.|
T Consensus 39 F~~GVaSGDp~~~svviWTRl~P~p~~~g~~v~V~wEvs~~~~f~~ivr~gt~~a~p----~~dhtv~v~~~gL~P~~~y 114 (522)
T COG3540 39 FTHGVASGDPTATSVVIWTRLDPEPLNGGRPVPVIWEVSTDENFSNIVRKGTVIASP----ELDHTVHVDLRGLSPDQDY 114 (522)
T ss_pred cccccccCCCCCCeEEEEEccCCccccCCCCcceEEEecCCccHHHHHhcCCccCCc----ccCceEEEeccCCCCCceE
Confidence 445599999 6777889998751 567899999999988887777655444 6789999999999999999
Q ss_pred EEEeCc---cCceeEEECCCC-CCCeEEEEEecCCCCCC---hHHHHHHhhcCCCCeEeecCccccCCCCh---------
Q 012895 127 YYRCGG---RGPEFSFKMPPA-NFPIEFAIVGDLGQTEW---TNSTLDHVGSKDYDVFLLPGDLSYADFQQ--------- 190 (454)
Q Consensus 127 ~Yrv~~---~s~~~~F~T~p~-~~~~~f~~igD~~~~~~---~~~~l~~i~~~~pd~vl~~GDl~y~~~~~--------- 190 (454)
+||+.. .+..++|||+|. ...++|+.++|.....+ ..++++.|.+.+||||||+||.+|+++..
T Consensus 115 fYRf~~~~~~spvGrtrTapa~~~~i~~~~fa~ascQ~~~~gy~~aY~~ma~~~~D~viH~GDyIYeyg~~~~~~~~~~~ 194 (522)
T COG3540 115 FYRFKAGDERSPVGRTRTAPAPGRAIRFVWFADASCQGWEIGYMTAYKTMAKEEPDFVIHLGDYIYEYGPIPDEVSLNSW 194 (522)
T ss_pred EEEEeeCCccccccccccCCCCCCcchhhhhhhccccccccchhHHHHHHHhcCCCEEEEcCCeeeccCCcccccccccc
Confidence 999865 367899999998 67788888888755544 45788899999999999999999987651
Q ss_pred --------------------hhHHH--HhhhhhhhhcCCCeeecCCCcccCCCCCC---------Cc--------chhhh
Q 012895 191 --------------------PLWDS--FGRLVEPYASSRPWMVTEGNHEIESIPII---------LP--------HAFKA 231 (454)
Q Consensus 191 --------------------~~~~~--~~~~~~~l~~~~P~~~v~GNHD~~~~~~~---------~~--------~~~~~ 231 (454)
.+|.. ..+.++.+.+..||++.|.+||..++-.. .. ..+++
T Consensus 195 ~~~~~~~~~~~ei~TLddYR~rya~y~~D~nLqaahA~~Pwi~~WDDHEv~NN~~~~~~~nD~~~~~k~~~~r~a~A~qA 274 (522)
T COG3540 195 KNVVVTQHKSKEIETLDDYRGRYAYYKTDENLQAAHAAFPWIVQWDDHEVANNWSNSIDENDSRYDEKDFVLRAAAARQA 274 (522)
T ss_pred cccccCCCCCcceeeHHHHhhHHhhhcccHHHHHhhccCCEEEEeccccccccccccccccCCCCChHHHHHHHHHHHHH
Confidence 11111 22456667778999999999999865321 00 12234
Q ss_pred hhhhccCCCCCCC--CCCCceEEEEeCe-EEEEEecccCCC----------------------CCCHHHHHHHHHHHHhh
Q 012895 232 YNARWLMPYEESG--SSSNLYYSFDIAG-AHIIMLGSYTDF----------------------DEDSAQYKWLKADLAKI 286 (454)
Q Consensus 232 ~~~~~~~p~~~~~--~~~~~~ys~~~g~-v~fi~Lds~~~~----------------------~~~~~Q~~WL~~~L~~~ 286 (454)
|.+. ||-.... .....|.+|.+|+ +.|.+||+.... ..|..|.+||++.|..+
T Consensus 275 yyE~--mPiR~~~~p~~~~lYR~~tyG~La~~~~LDtR~YR~dqp~~dg~~~~~q~~~~~~~~mlG~~QeqWLk~~L~~S 352 (522)
T COG3540 275 YYEH--MPIRYSSLPTDGRLYRSFTYGPLADLFVLDTRSYRTDQPCGDGNPPNCQAVAGSAATMLGEQQEQWLKRGLGAS 352 (522)
T ss_pred HHHh--CccccccCCccceeeeeeccccccceeeeehhhhccccccCCCCcchhhhhhCccccchhhHHHHHHHhhhhhc
Confidence 4443 4443222 2357899999999 789999985321 13789999999999997
Q ss_pred ccCCCCeEEEEEcccccc----CC---CCC----CC-Cc-HHHHHHHHHHHHhcCCc--EEEecccccc
Q 012895 287 NRKKTPWIFVLLHAPWYN----TN---TAH----QG-EG-ESMRNSMEELLYNARVD--VVFAGHVHAY 340 (454)
Q Consensus 287 ~~~~~~w~Iv~~H~P~~~----~~---~~~----~~-~~-~~~~~~l~~ll~~~~v~--lvl~GH~H~y 340 (454)
++.|+|+....|+-. .. ... .+ ++ ...|+.|..++...++. ++|+|.+|..
T Consensus 353 ---katWnVia~q~~~~~~~~d~~~a~~~~~a~~D~wdGy~~~RerLl~fi~~~~~~N~V~LtgDvH~~ 418 (522)
T COG3540 353 ---KATWNVIAQQMPLGLVVFDGSPATEGQEANADGWDGYPAGRERLLRFIADRKIRNTVVLTGDVHYS 418 (522)
T ss_pred ---chhhhhhhhhcceeEeecCCCccccCccccccCcCCCcccHHHHHHHHHhcCCCCcEEEechhHHH
Confidence 778999999988621 11 000 00 11 24689999999998765 9999999973
|
|
| >KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.7e-26 Score=205.34 Aligned_cols=264 Identities=20% Similarity=0.342 Sum_probs=170.2
Q ss_pred EEECCCC-CCCeEEEEEecCCCCCC-hHHHH----HHh-hcCCCCeEeecCccccCCCChhhHHH-----Hhhhhhhhhc
Q 012895 138 SFKMPPA-NFPIEFAIVGDLGQTEW-TNSTL----DHV-GSKDYDVFLLPGDLSYADFQQPLWDS-----FGRLVEPYAS 205 (454)
Q Consensus 138 ~F~T~p~-~~~~~f~~igD~~~~~~-~~~~l----~~i-~~~~pd~vl~~GDl~y~~~~~~~~~~-----~~~~~~~l~~ 205 (454)
+|.-|+. ++.++|+++||+|..+. .+..+ ..| +..++||||-+||++|+++.....|. |.+....-.-
T Consensus 33 ~l~~p~~~dgslsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pSL 112 (336)
T KOG2679|consen 33 RLYDPAKSDGSLSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPSL 112 (336)
T ss_pred hhcCCCCCCCceEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCCChhHHhhhhhcccCccc
Confidence 3555555 68899999999986543 22221 222 36799999999999999887443332 2222211112
Q ss_pred CCCeeecCCCcccCCCCCCCcc-hhhhhhhhccCCCCCCCCCCCceEE----EEe--CeEEEEEecccCC-------CC-
Q 012895 206 SRPWMVTEGNHEIESIPIILPH-AFKAYNARWLMPYEESGSSSNLYYS----FDI--AGAHIIMLGSYTD-------FD- 270 (454)
Q Consensus 206 ~~P~~~v~GNHD~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~ys----~~~--g~v~fi~Lds~~~-------~~- 270 (454)
+.|||.+.||||+.++...+.. -+.....+|..|. .||. .+. -++.++++|+... +.
T Consensus 113 QkpWy~vlGNHDyrGnV~AQls~~l~~~d~RW~c~r--------sf~~~ae~ve~f~v~~~~f~~d~~~~~~~~~ydw~~ 184 (336)
T KOG2679|consen 113 QKPWYSVLGNHDYRGNVEAQLSPVLRKIDKRWICPR--------SFYVDAEIVEMFFVDTTPFMDDTFTLCTDDVYDWRG 184 (336)
T ss_pred ccchhhhccCccccCchhhhhhHHHHhhccceeccc--------HHhhcceeeeeeccccccchhhheeccccccccccc
Confidence 3799999999999876543211 1344445666553 2221 111 1234444444221 11
Q ss_pred ------CCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeee
Q 012895 271 ------EDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFT 344 (454)
Q Consensus 271 ------~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~ 344 (454)
....++.||+..|+++ .++|+||++|||+.+.+ +.+...+++++|.++|++++||++++||+|..|...
T Consensus 185 v~PR~~~~~~~l~~le~~L~~S---~a~wkiVvGHh~i~S~~--~HG~T~eL~~~LlPiL~~n~VdlY~nGHDHcLQhis 259 (336)
T KOG2679|consen 185 VLPRVKYLRALLSWLEVALKAS---RAKWKIVVGHHPIKSAG--HHGPTKELEKQLLPILEANGVDLYINGHDHCLQHIS 259 (336)
T ss_pred CChHHHHHHHHHHHHHHHHHHh---hcceEEEecccceehhh--ccCChHHHHHHHHHHHHhcCCcEEEecchhhhhhcc
Confidence 1367889999999998 77899999999997765 345667899999999999999999999999988865
Q ss_pred cccCCCcCCCCcEEEEECCCCCCCCcccccC-CCCCCCceeeecccCEEEEEEecCCeEEEEEEEecCCCceeeeEEEEE
Q 012895 345 RIYDNKADPCGPIYITIGDGGNREGLALEFK-EPKSPLSMFQESSFGHARLKILDETRAHWSWYRNNDSDAVIADEVRLE 423 (454)
Q Consensus 345 ~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~-~~~p~~~~~~~~~~G~~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i~ 423 (454)
-. ..++.|+++|+|... ....+.. .-.|+...|.-..-||.-+++ ....+++.|++. .|+ ++.+....
T Consensus 260 ~~------e~~iqf~tSGagSka-w~g~~~~~~~~p~~lkF~YdgqGfmsv~i-s~~e~~vvfyD~-~G~--~Lhk~~t~ 328 (336)
T KOG2679|consen 260 SP------ESGIQFVTSGAGSKA-WRGTDHNPEVNPKELKFYYDGQGFMSVEI-SHSEARVVFYDV-SGK--VLHKWSTS 328 (336)
T ss_pred CC------CCCeeEEeeCCcccc-cCCCccCCccChhheEEeeCCCceEEEEE-ecceeEEEEEec-cCc--eEEEeecc
Confidence 21 356777777766532 1111111 123454555544558998987 456899999974 576 66665444
Q ss_pred Ec
Q 012895 424 SL 425 (454)
Q Consensus 424 ~~ 425 (454)
|+
T Consensus 329 kr 330 (336)
T KOG2679|consen 329 KR 330 (336)
T ss_pred cc
Confidence 33
|
|
| >cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-24 Score=204.91 Aligned_cols=217 Identities=22% Similarity=0.279 Sum_probs=151.3
Q ss_pred EEEEEecCCCCCCh-------------HHHHHHhhcC--CCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecC
Q 012895 149 EFAIVGDLGQTEWT-------------NSTLDHVGSK--DYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTE 213 (454)
Q Consensus 149 ~f~~igD~~~~~~~-------------~~~l~~i~~~--~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~ 213 (454)
||++++|+|.+... +++++.+++. +||+||++||+++... ...|+.+.+.++++ .+|+++++
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~-~~~~~~~~~~l~~~--~~p~~~v~ 77 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGS-PESYERLRELLAAL--PIPVYLLP 77 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCC-HHHHHHHHHHHhhc--CCCEEEeC
Confidence 69999999987531 3455666655 9999999999998654 34566666666665 58999999
Q ss_pred CCcccCCCCCCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCC----CCCHHHHHHHHHHHHhhccC
Q 012895 214 GNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDF----DEDSAQYKWLKADLAKINRK 289 (454)
Q Consensus 214 GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~----~~~~~Q~~WL~~~L~~~~~~ 289 (454)
||||... .+ ...+..... .....+|+|+.++++||+||+.... ...++|++||++.|++..
T Consensus 78 GNHD~~~-------~~---~~~~~~~~~---~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~ql~wL~~~L~~~~-- 142 (240)
T cd07402 78 GNHDDRA-------AM---RAVFPELPP---APGFVQYVVDLGGWRLILLDSSVPGQHGGELCAAQLDWLEAALAEAP-- 142 (240)
T ss_pred CCCCCHH-------HH---HHhhccccc---cccccceeEecCCEEEEEEeCCCCCCcCCEECHHHHHHHHHHHHhCC--
Confidence 9999831 22 222211100 1235688999999999999986432 235899999999999874
Q ss_pred CCCeEEEEEccccccCCCCCC-CCcHHHHHHHHHHHHhc-CCcEEEecccccceeeecccCCCcCCCCcEEEEECCCCCC
Q 012895 290 KTPWIFVLLHAPWYNTNTAHQ-GEGESMRNSMEELLYNA-RVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGGNR 367 (454)
Q Consensus 290 ~~~w~Iv~~H~P~~~~~~~~~-~~~~~~~~~l~~ll~~~-~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~ 367 (454)
.+++|+++|+|++....... ......++++.+++.++ +++++|+||+|...... .+|+.++++|+.|..
T Consensus 143 -~~~~il~~H~pp~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~--------~~g~~~~~~gs~~~~ 213 (240)
T cd07402 143 -DKPTLVFLHHPPFPVGIAWMDAIGLRNAEALAAVLARHPNVRAILCGHVHRPIDGS--------WGGIPLLTAPSTCHQ 213 (240)
T ss_pred -CCCEEEEECCCCccCCchhhhhhhCCCHHHHHHHHhcCCCeeEEEECCcCchHHeE--------ECCEEEEEcCcceee
Confidence 23589999999876543111 11112468899999999 89999999999965544 257888888887653
Q ss_pred CCcccccCCCCCCCceeeecccCEEEEEEecC
Q 012895 368 EGLALEFKEPKSPLSMFQESSFGHARLKILDE 399 (454)
Q Consensus 368 ~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~ 399 (454)
+. +.+....+.+..+||..+.+.++
T Consensus 214 ------~~-~~~~~~~~~~~~~~~~~~~~~~~ 238 (240)
T cd07402 214 ------FA-PDLDDFALDALAPGYRALSLHED 238 (240)
T ss_pred ------ec-CCCCcccccccCCCCcEEEEecC
Confidence 32 22333444556779988887653
|
GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa |
| >cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.4e-24 Score=206.06 Aligned_cols=193 Identities=18% Similarity=0.238 Sum_probs=133.9
Q ss_pred eEEEEEecCCCCCCh--------------HHHHHHhhcCCCCeEeecCccccCCCCh--hhHHHHhhhhhhhhcCCCeee
Q 012895 148 IEFAIVGDLGQTEWT--------------NSTLDHVGSKDYDVFLLPGDLSYADFQQ--PLWDSFGRLVEPYASSRPWMV 211 (454)
Q Consensus 148 ~~f~~igD~~~~~~~--------------~~~l~~i~~~~pd~vl~~GDl~y~~~~~--~~~~~~~~~~~~l~~~~P~~~ 211 (454)
|||+++||+|..... .++++.+++.+||+||++||+++.+... ..|+.+.+.++.+ .+|+++
T Consensus 1 ~r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l--~~p~~~ 78 (267)
T cd07396 1 FRFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRL--KGPVHH 78 (267)
T ss_pred CeEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhc--CCCEEE
Confidence 699999999954321 2456677777899999999999765531 4455555555544 389999
Q ss_pred cCCCcccCCCCCCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCC-----------------------
Q 012895 212 TEGNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTD----------------------- 268 (454)
Q Consensus 212 v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~----------------------- 268 (454)
++||||...... . .+...+. ...+..||+|++++++||+||+...
T Consensus 79 v~GNHD~~~~~~----~--~~~~~~~------~~~~~~yysf~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (267)
T cd07396 79 VLGNHDLYNPSR----E--YLLLYTL------LGLGAPYYSFSPGGIRFIVLDGYDISALGRPEDTPKAENADDNSNLGL 146 (267)
T ss_pred ecCccccccccH----h--hhhcccc------cCCCCceEEEecCCcEEEEEeCCccccccCCCCChhhhhHHHhchhhh
Confidence 999999953211 0 0100010 1123569999999999999998531
Q ss_pred -----------CCCCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhc-CCcEEEecc
Q 012895 269 -----------FDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNA-RVDVVFAGH 336 (454)
Q Consensus 269 -----------~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~-~v~lvl~GH 336 (454)
.....+|++||+++|++... +..++||++|+|++..... .......++.+.+++.++ +|+++|+||
T Consensus 147 ~~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~-~~~~viV~~Hhp~~~~~~~-~~~~~~~~~~~~~ll~~~~~V~~v~~GH 224 (267)
T cd07396 147 YLSEPRFVDWNGGIGEEQLQWLRNELQEADA-NGEKVIIFSHFPLHPESTS-PHGLLWNHEEVLSILRAYGCVKACISGH 224 (267)
T ss_pred hccCccceeccCcCCHHHHHHHHHHHHHHHh-cCCeEEEEEeccCCCCCCC-ccccccCHHHHHHHHHhCCCEEEEEcCC
Confidence 12358999999999998754 2235899999998765431 111112357889999995 799999999
Q ss_pred cccceeeecccCCCcCCCCcEEEEECCC
Q 012895 337 VHAYERFTRIYDNKADPCGPIYITIGDG 364 (454)
Q Consensus 337 ~H~y~r~~~~~~~~~~~~g~~yi~~G~g 364 (454)
+|.++... .+|+.|+++|+-
T Consensus 225 ~H~~~~~~--------~~gi~~~~~~a~ 244 (267)
T cd07396 225 DHEGGYAQ--------RHGIHFLTLEGM 244 (267)
T ss_pred cCCCCccc--------cCCeeEEEechh
Confidence 99987543 258888887754
|
Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.8e-23 Score=201.05 Aligned_cols=238 Identities=17% Similarity=0.215 Sum_probs=151.2
Q ss_pred EECCCC-CCCeEEEEEecCCCCCC-------------hHHHHHHhhc--CCCCeEeecCccccCCCChhhHHHHhhhhhh
Q 012895 139 FKMPPA-NFPIEFAIVGDLGQTEW-------------TNSTLDHVGS--KDYDVFLLPGDLSYADFQQPLWDSFGRLVEP 202 (454)
Q Consensus 139 F~T~p~-~~~~~f~~igD~~~~~~-------------~~~~l~~i~~--~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~ 202 (454)
.+|++. ..++||++++|+|.... .+++++.+++ .+|||||++||+++... ...|+.+.+.+++
T Consensus 5 ~~~~~~~~~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~-~~~~~~~~~~l~~ 83 (275)
T PRK11148 5 LTLPLAGEARVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS-SEAYQHFAEGIAP 83 (275)
T ss_pred cccccCCCCCEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC-HHHHHHHHHHHhh
Confidence 456555 67899999999996321 1235566643 47999999999998543 3456666666665
Q ss_pred hhcCCCeeecCCCcccCCCCCCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCC----CCCCHHHHHH
Q 012895 203 YASSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTD----FDEDSAQYKW 278 (454)
Q Consensus 203 l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~----~~~~~~Q~~W 278 (454)
+ ..|+++++||||... .+..+.....+. ..++.+..++++||+||+... ...+.+|++|
T Consensus 84 l--~~Pv~~v~GNHD~~~-------~~~~~~~~~~~~--------~~~~~~~~~~~~~i~Lds~~~g~~~G~l~~~ql~w 146 (275)
T PRK11148 84 L--RKPCVWLPGNHDFQP-------AMYSALQDAGIS--------PAKHVLIGEHWQILLLDSQVFGVPHGELSEYQLEW 146 (275)
T ss_pred c--CCcEEEeCCCCCChH-------HHHHHHhhcCCC--------ccceEEecCCEEEEEecCCCCCCcCCEeCHHHHHH
Confidence 5 389999999999831 222211111111 123334445699999998542 1235899999
Q ss_pred HHHHHHhhccCCCCeEEEEEccccccCCCCCCC-CcHHHHHHHHHHHHhc-CCcEEEecccccceeeecccCCCcCCCCc
Q 012895 279 LKADLAKINRKKTPWIFVLLHAPWYNTNTAHQG-EGESMRNSMEELLYNA-RVDVVFAGHVHAYERFTRIYDNKADPCGP 356 (454)
Q Consensus 279 L~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~-~~~~~~~~l~~ll~~~-~v~lvl~GH~H~y~r~~~~~~~~~~~~g~ 356 (454)
|+++|++... +..||++|||++.....+.. ......++|.++++++ +|+++|+||+|...... -+|+
T Consensus 147 L~~~L~~~~~---~~~vv~~hH~P~~~~~~~~d~~~l~n~~~l~~ll~~~~~v~~vl~GH~H~~~~~~--------~~gi 215 (275)
T PRK11148 147 LERKLADAPE---RHTLVLLHHHPLPAGCAWLDQHSLRNAHELAEVLAKFPNVKAILCGHIHQELDLD--------WNGR 215 (275)
T ss_pred HHHHHhhCCC---CCeEEEEcCCCCCCCcchhhccCCCCHHHHHHHHhcCCCceEEEecccChHHhce--------ECCE
Confidence 9999998743 23567777665544332211 1123457899999998 89999999999854332 2477
Q ss_pred EEEEECCCCCCCCcccccCCCCCCCceeeecccCEEEEEEecCCeEEEEEEEecCC
Q 012895 357 IYITIGDGGNREGLALEFKEPKSPLSMFQESSFGHARLKILDETRAHWSWYRNNDS 412 (454)
Q Consensus 357 ~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~~~~~~~~~~dg 412 (454)
.++++++.+.. +....+.+ .+.....||..+++.+++.+..+.++.+++
T Consensus 216 ~~~~~ps~~~q------~~~~~~~~-~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~ 264 (275)
T PRK11148 216 RLLATPSTCVQ------FKPHCTNF-TLDTVAPGWRELELHADGSLETEVHRLADT 264 (275)
T ss_pred EEEEcCCCcCC------cCCCCCcc-ccccCCCcEEEEEEcCCCcEEEEEEEcCCC
Confidence 77766655432 22111221 122345699999987666677777766543
|
|
| >cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.9e-22 Score=187.61 Aligned_cols=185 Identities=16% Similarity=0.249 Sum_probs=123.6
Q ss_pred EEEEecCCCCCCh--------HHHHHHhhcCCCCeEeecCccccCCC--------ChhhHHHHhhhhhhhhc--CCCeee
Q 012895 150 FAIVGDLGQTEWT--------NSTLDHVGSKDYDVFLLPGDLSYADF--------QQPLWDSFGRLVEPYAS--SRPWMV 211 (454)
Q Consensus 150 f~~igD~~~~~~~--------~~~l~~i~~~~pd~vl~~GDl~y~~~--------~~~~~~~~~~~~~~l~~--~~P~~~ 211 (454)
|++++|+|.+... ..+++.+++.+||+||++||+++... ...+|+.|.+.+..... ..|++.
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 81 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWFD 81 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEEE
Confidence 7899999986542 12345667889999999999997442 24567777776654432 489999
Q ss_pred cCCCcccCCCCCCCcchhhhhhhhccCCCCCCCCCCCceEE--EEeCeEEEEEecccCC----------CCCCHHHHHHH
Q 012895 212 TEGNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYS--FDIAGAHIIMLGSYTD----------FDEDSAQYKWL 279 (454)
Q Consensus 212 v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys--~~~g~v~fi~Lds~~~----------~~~~~~Q~~WL 279 (454)
++||||+...... ......|........ ....+|. +..++++||+|||... .....+|++||
T Consensus 82 v~GNHD~~~~~~~-~~~~~~~~~y~~~~~-----~~~~~~~~~~~~~~~~~I~Ldt~~~~~~~~~~~~~g~l~~~ql~wL 155 (256)
T cd07401 82 IRGNHDLFNIPSL-DSENNYYRKYSATGR-----DGSFSFSHTTRFGNYSFIGVDPTLFPGPKRPFNFFGSLDKKLLDRL 155 (256)
T ss_pred eCCCCCcCCCCCc-cchhhHHHHhheecC-----CCccceEEEecCCCEEEEEEcCccCCCCCCCCceeccCCHHHHHHH
Confidence 9999999543321 111122222111110 0122333 3358999999999632 12458999999
Q ss_pred HHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecc
Q 012895 280 KADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRI 346 (454)
Q Consensus 280 ~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~ 346 (454)
+++|++... .+++||++|+|+....... .. ....+.++|++++|+++||||+|.+++..|+
T Consensus 156 ~~~L~~~~~--~~~~IV~~HhP~~~~~~~~---~~-~~~~~~~ll~~~~v~~vl~GH~H~~~~~~p~ 216 (256)
T cd07401 156 EKELEKSTN--SNYTIWFGHYPTSTIISPS---AK-SSSKFKDLLKKYNVTAYLCGHLHPLGGLEPV 216 (256)
T ss_pred HHHHHhccc--CCeEEEEEcccchhccCCC---cc-hhHHHHHHHHhcCCcEEEeCCccCCCcceee
Confidence 999997643 3579999999986532211 11 2223999999999999999999999985654
|
TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.3e-21 Score=176.22 Aligned_cols=149 Identities=18% Similarity=0.246 Sum_probs=111.9
Q ss_pred eEEEEEecCCCCCCh---------HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhh-cCCCeeecCCCcc
Q 012895 148 IEFAIVGDLGQTEWT---------NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYA-SSRPWMVTEGNHE 217 (454)
Q Consensus 148 ~~f~~igD~~~~~~~---------~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~-~~~P~~~v~GNHD 217 (454)
|||++++|+|..... ..+++.+.+.+||+||++||+++.+....+|+.+.+.++.+. ..+|+++++||||
T Consensus 1 f~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~GNHD 80 (214)
T cd07399 1 FTLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDKAGIPYSVLAGNHD 80 (214)
T ss_pred CEEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHHcCCcEEEECCCCc
Confidence 689999999875431 223444556789999999999987665678998888888887 4599999999999
Q ss_pred cCCCCCCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEEEE
Q 012895 218 IESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVL 297 (454)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~ 297 (454)
. ++.+|+. ...+|++||++.|++.+. +++||+
T Consensus 81 ~-----------------------------------------~~~ld~~----~~~~ql~WL~~~L~~~~~---~~~iv~ 112 (214)
T cd07399 81 L-----------------------------------------VLALEFG----PRDEVLQWANEVLKKHPD---RPAILT 112 (214)
T ss_pred c-----------------------------------------hhhCCCC----CCHHHHHHHHHHHHHCCC---CCEEEE
Confidence 3 1223321 248999999999998632 358999
Q ss_pred EccccccCCCCCCCC-----cHHHHHHHHHHHHhc-CCcEEEecccccceeee
Q 012895 298 LHAPWYNTNTAHQGE-----GESMRNSMEELLYNA-RVDVVFAGHVHAYERFT 344 (454)
Q Consensus 298 ~H~P~~~~~~~~~~~-----~~~~~~~l~~ll~~~-~v~lvl~GH~H~y~r~~ 344 (454)
+|+|++......... ....++.|.++++++ +|+++||||+|.+.+..
T Consensus 113 ~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~~~ 165 (214)
T cd07399 113 THAYLNCDDSRPDSIDYDSDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAGRTT 165 (214)
T ss_pred ecccccCCCCcCcccccccccccHHHHHHHHHhCCCCEEEEEccccCCCceEE
Confidence 999998654322111 123456788999999 79999999999987765
|
YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for |
| >cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.81 E-value=4e-19 Score=172.84 Aligned_cols=188 Identities=20% Similarity=0.299 Sum_probs=124.5
Q ss_pred EEecCCCCCC---hHHHHHHhhcC--CCCeEeecCccccCCCChhh--------HHHHhhhhhhhhcCCCeeecCCCccc
Q 012895 152 IVGDLGQTEW---TNSTLDHVGSK--DYDVFLLPGDLSYADFQQPL--------WDSFGRLVEPYASSRPWMVTEGNHEI 218 (454)
Q Consensus 152 ~igD~~~~~~---~~~~l~~i~~~--~pd~vl~~GDl~y~~~~~~~--------~~~~~~~~~~l~~~~P~~~v~GNHD~ 218 (454)
-+|+.+.... .+.+++.+++. +|||||++||+++.+..... +..+.+.++.....+|+++++||||.
T Consensus 42 ~~G~~~CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD~ 121 (296)
T cd00842 42 PWGDYGCDSPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHDS 121 (296)
T ss_pred CCcCcCCCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCCC
Confidence 3455543332 24567777665 99999999999987755221 33444555555567999999999999
Q ss_pred CCCCCCC-----cchhhhhhhhcc--CCCCCC-CCCCCceEEEE-eCeEEEEEecccCCC-----------CCCHHHHHH
Q 012895 219 ESIPIIL-----PHAFKAYNARWL--MPYEES-GSSSNLYYSFD-IAGAHIIMLGSYTDF-----------DEDSAQYKW 278 (454)
Q Consensus 219 ~~~~~~~-----~~~~~~~~~~~~--~p~~~~-~~~~~~~ys~~-~g~v~fi~Lds~~~~-----------~~~~~Q~~W 278 (454)
....... ...+..+.+.|. ++.+.. ....+.||++. .++++||+|||.... .....|++|
T Consensus 122 ~p~~~~~~~~~~~~~~~~~~~~w~~~l~~~~~~~~~~ggYY~~~~~~~l~vI~Lnt~~~~~~~~~~~~~~~~~~~~Ql~W 201 (296)
T cd00842 122 YPVNQFPPNNSPSWLYDALAELWKSWLPEEAEETFKKGGYYSVPVKPGLRVISLNTNLYYKKNFWLLGSNETDPAGQLQW 201 (296)
T ss_pred CcccccCCcccccHHHHHHHHHHHhhcCHHHHHHhhcceEEEEEcCCCeEEEEEeCccccccChhhhccCCCCHHHHHHH
Confidence 6533221 111222333332 222111 11246789988 788999999985321 224789999
Q ss_pred HHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcC--CcEEEecccccceee
Q 012895 279 LKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNAR--VDVVFAGHVHAYERF 343 (454)
Q Consensus 279 L~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~--v~lvl~GH~H~y~r~ 343 (454)
|+++|++++.++. .++|++|+|+....... .....++|.+++++|+ |.++|+||+|..+..
T Consensus 202 L~~~L~~a~~~~~-~v~I~~HiPp~~~~~~~---~~~~~~~~~~ii~~y~~~i~~~~~GH~H~d~~~ 264 (296)
T cd00842 202 LEDELQEAEQAGE-KVWIIGHIPPGVNSYDT---LENWSERYLQIINRYSDTIAGQFFGHTHRDEFR 264 (296)
T ss_pred HHHHHHHHHHCCC-eEEEEeccCCCCccccc---chHHHHHHHHHHHHHHHhhheeeecccccceEE
Confidence 9999999865333 48899999987653321 1346789999999997 778999999996544
|
Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but |
| >cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.4e-18 Score=164.21 Aligned_cols=169 Identities=18% Similarity=0.241 Sum_probs=111.8
Q ss_pred HHHHHhh-cCCCCeEeecCccccCCCC--hhhHH----HHhhhhhhhhcCCCeeecCCCcccCCCCCCCcchhhhhhhhc
Q 012895 164 STLDHVG-SKDYDVFLLPGDLSYADFQ--QPLWD----SFGRLVEPYASSRPWMVTEGNHEIESIPIILPHAFKAYNARW 236 (454)
Q Consensus 164 ~~l~~i~-~~~pd~vl~~GDl~y~~~~--~~~~~----~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~ 236 (454)
+.++.+. ..+||+||++||+++.+.. ..+|. .|.+.+.++....|++.++||||+.............|.+.|
T Consensus 35 ~~~~~~~~~l~PD~vv~lGDL~d~G~~~~~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDig~~~~~~~~~~~rf~~~F 114 (257)
T cd08163 35 RNWRYMQKQLKPDSTIFLGDLFDGGRDWADEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDIGFGNGVVLPVRQRFEKYF 114 (257)
T ss_pred HHHHHHHHhcCCCEEEEecccccCCeeCcHHHHHHHHHHHHHHhcCCCccceEEEeCCCcccCCCCCCCHHHHHHHHHHh
Confidence 3444443 4689999999999986543 23443 333333333224799999999998644332222445666666
Q ss_pred cCCCCCCCCCCCceEEEEeCeEEEEEecccCC-----CCCCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCC
Q 012895 237 LMPYEESGSSSNLYYSFDIAGAHIIMLGSYTD-----FDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQG 311 (454)
Q Consensus 237 ~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~-----~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~ 311 (454)
. ..++.+++++++||+||+... ......|.+||++.|+.... ..+ +||++|+|+|......++
T Consensus 115 g----------~~~~~~~~~~~~fV~Lds~~l~~~~~~~~~~~~~~~l~~~l~~~~~-~~p-~ILl~H~Plyr~~~~~cg 182 (257)
T cd08163 115 G----------PTSRVIDVGNHTFVILDTISLSNKDDPDVYQPPREFLHSFSAMKVK-SKP-RILLTHVPLYRPPNTSCG 182 (257)
T ss_pred C----------CCceEEEECCEEEEEEccccccCCcccccchhHHHHHHhhhhccCC-CCc-EEEEeccccccCCCCCCC
Confidence 4 236889999999999999532 12346799999999887543 333 899999999875432211
Q ss_pred ---C---------cHH-----HHHHHHHHHHhcCCcEEEecccccceeee
Q 012895 312 ---E---------GES-----MRNSMEELLYNARVDVVFAGHVHAYERFT 344 (454)
Q Consensus 312 ---~---------~~~-----~~~~l~~ll~~~~v~lvl~GH~H~y~r~~ 344 (454)
+ +.. -.+.-..+|++.++.+||+||+|.|=...
T Consensus 183 ~~re~~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~~C~~~ 232 (257)
T cd08163 183 PLRESKTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHDYCEVV 232 (257)
T ss_pred CccccCCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCCccceeE
Confidence 0 000 12444577888899999999999975543
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site |
| >PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11 | Back alignment and domain information |
|---|
Probab=99.76 E-value=1e-18 Score=154.69 Aligned_cols=189 Identities=21% Similarity=0.207 Sum_probs=102.1
Q ss_pred eEEEEEecCCCCCChH-----HHHHHhhcCCCCeEeecCccccCCCChhhHHHHh-hhhhhhhcCCCeeecCCCcccCCC
Q 012895 148 IEFAIVGDLGQTEWTN-----STLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFG-RLVEPYASSRPWMVTEGNHEIESI 221 (454)
Q Consensus 148 ~~f~~igD~~~~~~~~-----~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~-~~~~~l~~~~P~~~v~GNHD~~~~ 221 (454)
|||+++||+|...... .........++|+||++||+++.+.....+.... ..........|+++++||||+...
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~~ 80 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYSG 80 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHHH
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhcccccccccccccccee
Confidence 7999999999876543 2333445889999999999999877644433322 122334456999999999999532
Q ss_pred CCCCcchhhhhhhhccC---CCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEEEEE
Q 012895 222 PIILPHAFKAYNARWLM---PYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLL 298 (454)
Q Consensus 222 ~~~~~~~~~~~~~~~~~---p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~ 298 (454)
.. ........... ....................................+..|+............+++||++
T Consensus 81 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~ 156 (200)
T PF00149_consen 81 NS----FYGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLLEAKNDDPVIVFT 156 (200)
T ss_dssp HH----HHHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHHHEEEESEEEEEE
T ss_pred cc----ccccccccccccccccccccccCcceeeecccccccccccccccccccccchhcccccccccccccccceeEEE
Confidence 11 00001111100 000000000000111111122222221111111223333333322222222456899999
Q ss_pred ccccccCCCCCCC--CcHHHHHHHHHHHHhcCCcEEEecccccc
Q 012895 299 HAPWYNTNTAHQG--EGESMRNSMEELLYNARVDVVFAGHVHAY 340 (454)
Q Consensus 299 H~P~~~~~~~~~~--~~~~~~~~l~~ll~~~~v~lvl~GH~H~y 340 (454)
|+|++........ .....++.+..++.+++|+++|+||+|.|
T Consensus 157 H~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~GH~H~~ 200 (200)
T PF00149_consen 157 HHPPYSSSSDSSSYGNESKGREALEELLKKYNVDLVLSGHTHRY 200 (200)
T ss_dssp SSSSSTTSSSTHHHSSEEEHHHHHHHHHHHTTCSEEEEESSSSE
T ss_pred ecCCCCccccccccchhhccHHHHHHHHhhCCCCEEEeCceecC
Confidence 9999876543211 11246788999999999999999999986
|
The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C .... |
| >cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.73 E-value=1e-16 Score=150.10 Aligned_cols=191 Identities=16% Similarity=0.170 Sum_probs=116.9
Q ss_pred EEEEecCCCCC--------Ch---HHHHHHhhcC------CCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeec
Q 012895 150 FAIVGDLGQTE--------WT---NSTLDHVGSK------DYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVT 212 (454)
Q Consensus 150 f~~igD~~~~~--------~~---~~~l~~i~~~------~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v 212 (454)
+.+++|+|... .. .+.++.+.+. +||+||++||+++.... .......+.++.+ ..|++++
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~~-~~~~~~l~~l~~l--~~~v~~V 77 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMKL-EEAKLDLAWIDAL--PGTKVLL 77 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCCh-HHHHHHHHHHHhC--CCCeEEE
Confidence 35789999762 22 3445554433 99999999999854332 2222222333333 2578999
Q ss_pred CCCcccCCCCCCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccC----CC-------------CCCHHH
Q 012895 213 EGNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYT----DF-------------DEDSAQ 275 (454)
Q Consensus 213 ~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~----~~-------------~~~~~Q 275 (454)
+||||+... ....+.+.+.-. +..-.....+.++++.|++++... .+ .....|
T Consensus 78 ~GNHD~~~~------~~~~~~~~l~~~----~~~~~~n~~~~~~~i~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
T cd07393 78 KGNHDYWWG------SASKLRKALEES----RLALLFNNAYIDDDVAICGTRGWDNPGNPWPPINETLKVEEDEKIFERE 147 (232)
T ss_pred eCCccccCC------CHHHHHHHHHhc----CeEEeccCcEEECCEEEEEEEeeCCCCCccccccccccchhHHHHHHHH
Confidence 999998321 122222222100 000001234556788898876311 11 012568
Q ss_pred HHHHHHHHHhhccCC-CCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCCcCCC
Q 012895 276 YKWLKADLAKINRKK-TPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPC 354 (454)
Q Consensus 276 ~~WL~~~L~~~~~~~-~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~ 354 (454)
+.||++.|++..... ..++|+++|+|++.... ..+.+.+++++++++++|+||+|.+++..|+.. .-+
T Consensus 148 l~~l~~~L~~~~~~~~~~~~i~~~H~p~~~~~~--------~~~~~~~~~~~~~v~~vl~GH~H~~~~~~~~~~---~~~ 216 (232)
T cd07393 148 LERLELSLKAAKKREKEKIKIVMLHYPPANENG--------DDSPISKLIEEYGVDICVYGHLHGVGRDRAING---ERG 216 (232)
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEECCCCcCCCC--------CHHHHHHHHHHcCCCEEEECCCCCCcccccccc---eEC
Confidence 999999999875422 24689999999876432 124678888999999999999999888765531 125
Q ss_pred CcEEEEECCC
Q 012895 355 GPIYITIGDG 364 (454)
Q Consensus 355 g~~yi~~G~g 364 (454)
|+.|.++.++
T Consensus 217 gi~~~~~~~~ 226 (232)
T cd07393 217 GIRYQLVSAD 226 (232)
T ss_pred CEEEEEEcch
Confidence 7778777665
|
DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat |
| >cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.73 E-value=9.7e-17 Score=146.87 Aligned_cols=150 Identities=21% Similarity=0.284 Sum_probs=100.7
Q ss_pred CCeEEEEEecCCCCCCh------------HHHHHH-hhcCCCCeEeecCccccCCCChh-hHHHHhhhhhhhhc-CCCee
Q 012895 146 FPIEFAIVGDLGQTEWT------------NSTLDH-VGSKDYDVFLLPGDLSYADFQQP-LWDSFGRLVEPYAS-SRPWM 210 (454)
Q Consensus 146 ~~~~f~~igD~~~~~~~------------~~~l~~-i~~~~pd~vl~~GDl~y~~~~~~-~~~~~~~~~~~l~~-~~P~~ 210 (454)
+.+||++++|+|..... .+.++. ++..+||+||++||+++...... .+..+.++++.+.. .+|++
T Consensus 1 ~~~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~ 80 (199)
T cd07383 1 GKFKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWA 80 (199)
T ss_pred CceEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEE
Confidence 36899999999985432 122332 34679999999999998766532 35556666666544 49999
Q ss_pred ecCCCcccCCCCCCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhc--c
Q 012895 211 VTEGNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKIN--R 288 (454)
Q Consensus 211 ~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~--~ 288 (454)
+++||||.. -.....|++||+++|++.. +
T Consensus 81 ~~~GNHD~~-------------------------------------------------g~l~~~ql~wL~~~l~~~~~~~ 111 (199)
T cd07383 81 ATFGNHDGY-------------------------------------------------DWIRPSQIEWFKETSAALKKKY 111 (199)
T ss_pred EECccCCCC-------------------------------------------------CCCCHHHHHHHHHHHHHHhhcc
Confidence 999999910 0123789999999999873 1
Q ss_pred CCCCeEEEEEccccccCCCCCC---------CC---cHHHHHHH-HHHHHhcCCcEEEecccccceeee
Q 012895 289 KKTPWIFVLLHAPWYNTNTAHQ---------GE---GESMRNSM-EELLYNARVDVVFAGHVHAYERFT 344 (454)
Q Consensus 289 ~~~~w~Iv~~H~P~~~~~~~~~---------~~---~~~~~~~l-~~ll~~~~v~lvl~GH~H~y~r~~ 344 (454)
....+.++++|+|+......+. .+ .......+ ..+.+..+|+++|+||+|.++...
T Consensus 112 ~~~~~~l~f~H~P~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~v~~v~~GH~H~~~~~~ 180 (199)
T cd07383 112 GKPIPSLAFFHIPLPEYREVWEGKGKVPGINNEKVCCPKINSGLFKALLERGDVKGVFCGHDHGNDFCG 180 (199)
T ss_pred CCCCcceEEEecChHHHHhhhcccCCCCccCCcccCCCcCCcHHHHHHHHcCCeEEEEeCCCCCcceec
Confidence 1234689999999865432111 11 01122334 444466789999999999976544
|
DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP |
| >cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.1e-16 Score=144.84 Aligned_cols=167 Identities=13% Similarity=0.156 Sum_probs=104.0
Q ss_pred EEEEecCCCCCChHHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCCCCcchh
Q 012895 150 FAIVGDLGQTEWTNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPIILPHAF 229 (454)
Q Consensus 150 f~~igD~~~~~~~~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~ 229 (454)
++++||+|........ ..+++.++|+||++||+++.... ..+..+ +.++.+ ..|+++++||||... ..
T Consensus 1 i~~~sD~H~~~~~~~~-~~~~~~~~D~vv~~GDl~~~~~~-~~~~~~-~~l~~~--~~p~~~v~GNHD~~~-------~~ 68 (188)
T cd07392 1 ILAISDIHGDVEKLEA-IILKAEEADAVIVAGDITNFGGK-EAAVEI-NLLLAI--GVPVLAVPGNCDTPE-------IL 68 (188)
T ss_pred CEEEEecCCCHHHHHH-HHhhccCCCEEEECCCccCcCCH-HHHHHH-HHHHhc--CCCEEEEcCCCCCHH-------HH
Confidence 5789999976432222 34567899999999999975543 222222 333322 489999999999731 11
Q ss_pred hhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCC------CCCCHHHHHHHHHHHHhhccCCCCeEEEEEccccc
Q 012895 230 KAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTD------FDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWY 303 (454)
Q Consensus 230 ~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~------~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~ 303 (454)
.......... ....+.+++++|+++++... ....++|++|+ +.|... ..+.+|+++|+|++
T Consensus 69 ~~~~~~~~~~---------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-~~l~~~---~~~~~ilv~H~pp~ 135 (188)
T cd07392 69 GLLTSAGLNL---------HGKVVEVGGYTFVGIGGSNPTPFNTPIELSEEEIVSD-GRLNNL---LAKNLILVTHAPPY 135 (188)
T ss_pred HhhhcCcEec---------CCCEEEECCEEEEEeCCCCCCCCCCccccCHHHHHHh-hhhhcc---CCCCeEEEECCCCc
Confidence 1110000000 11235578899999987421 12357889998 444433 22348999999997
Q ss_pred cCCC-CCCCCcHHHHHHHHHHHHhcCCcEEEecccccce
Q 012895 304 NTNT-AHQGEGESMRNSMEELLYNARVDVVFAGHVHAYE 341 (454)
Q Consensus 304 ~~~~-~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~ 341 (454)
.... ..........+.+.+++++++++++||||+|...
T Consensus 136 ~~~~d~~~~~~~~g~~~l~~li~~~~~~~~l~GH~H~~~ 174 (188)
T cd07392 136 GTAVDRVSGGFHVGSKAIRKFIEERQPLLCICGHIHESR 174 (188)
T ss_pred CCcccccCCCCccCCHHHHHHHHHhCCcEEEEecccccc
Confidence 6311 1111101234788899999999999999999853
|
PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina |
| >TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.1e-16 Score=155.95 Aligned_cols=94 Identities=21% Similarity=0.344 Sum_probs=72.1
Q ss_pred CCceEEEE-eCeEEEEEecccCC-----CCCCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCC-----CCcHH
Q 012895 247 SNLYYSFD-IAGAHIIMLGSYTD-----FDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQ-----GEGES 315 (454)
Q Consensus 247 ~~~~ys~~-~g~v~fi~Lds~~~-----~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~-----~~~~~ 315 (454)
+..||+|+ .++++||+|||... -...++|++||+++|++. +.+++||++|||++....... +....
T Consensus 290 G~~YYSFd~~ggvrfIvLDSt~~~G~~~G~L~eeQL~WLeqeLa~a---~~k~VVVf~HHPp~s~g~~~~Dp~~pg~~~~ 366 (496)
T TIGR03767 290 GTGYYTFDIAGGVRGISMDTTNRAGGDEGSLGQTQFKWIKDTLRAS---SDTLFVLFSHHTSWSMVNELTDPVDPGEKRH 366 (496)
T ss_pred CCceEEEEeECCEEEEEEeCCCcCCCcCCccCHHHHHHHHHHHhcC---CCCCEEEEECCCCcccccccccccccccccc
Confidence 46799999 89999999999642 124699999999999976 335699999999886543221 11122
Q ss_pred HHHHHHHHHHhc-CCcEEEecccccceee
Q 012895 316 MRNSMEELLYNA-RVDVVFAGHVHAYERF 343 (454)
Q Consensus 316 ~~~~l~~ll~~~-~v~lvl~GH~H~y~r~ 343 (454)
..++|.++|+++ +|.++||||+|.....
T Consensus 367 n~~eLldLL~~ypnV~aVfsGHvH~n~i~ 395 (496)
T TIGR03767 367 LGTELVSLLLEHPNVLAWVNGHTHSNKIT 395 (496)
T ss_pred CHHHHHHHHhcCCCceEEEECCcCCCccc
Confidence 357899999998 7999999999986544
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202. |
| >TIGR03729 acc_ester putative phosphoesterase | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.5e-16 Score=147.33 Aligned_cols=176 Identities=15% Similarity=0.118 Sum_probs=107.4
Q ss_pred EEEEEecCCCCCCh-------HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCC
Q 012895 149 EFAIVGDLGQTEWT-------NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESI 221 (454)
Q Consensus 149 ~f~~igD~~~~~~~-------~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~ 221 (454)
||++++|+|..... ..+++.+.+.++|+||++||++... .....+.+.+..+ ...|+++++||||+...
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~---~~~~~~~~~l~~~-~~~pv~~v~GNHD~~~~ 76 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDF---QRSLPFIEKLQEL-KGIKVTFNAGNHDMLKD 76 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccch---hhHHHHHHHHHHh-cCCcEEEECCCCCCCCC
Confidence 68999999964221 2355666678899999999999642 1122233333322 34899999999998422
Q ss_pred CCCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCC--------------------------C-----
Q 012895 222 PIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDF--------------------------D----- 270 (454)
Q Consensus 222 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~--------------------------~----- 270 (454)
. .+..+.+.+. +. .-.+.++.+..++++|++++...++ .
T Consensus 77 ~-----~~~~~~~~~~-~~----~l~~~~~~~~~~~~~~ig~~gw~d~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 146 (239)
T TIGR03729 77 L-----TYEEIESNDS-PL----YLHNRFIDIPNTQWRIIGNNGWYDYSFSNDKTSKEILRWKKSFWFDRRIKRPMSDPE 146 (239)
T ss_pred C-----CHHHHHhccc-hh----hhcccccccCCCceEEEeeccceecccccccCHHHHHHhhhcEEeecccCCCCChHH
Confidence 1 1111221110 00 0012233344467888888842211 0
Q ss_pred CCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCC-------CCCCC-cHHHHHHHHHHHHhcCCcEEEecccccce
Q 012895 271 EDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNT-------AHQGE-GESMRNSMEELLYNARVDVVFAGHVHAYE 341 (454)
Q Consensus 271 ~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~-------~~~~~-~~~~~~~l~~ll~~~~v~lvl~GH~H~y~ 341 (454)
....|++||++.|++... ..+|+++|+|+..... .+... .....+.|.+++++++++++|+||+|.-.
T Consensus 147 ~~~~~l~~l~~~l~~~~~---~~~ivvtH~pP~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~~v~~~i~GH~H~~~ 222 (239)
T TIGR03729 147 RTAIVLKQLKKQLNQLDN---KQVIFVTHFVPHRDFIYVPMDHRRFDMFNAFLGSQHFGQLLVKYEIKDVIFGHLHRRF 222 (239)
T ss_pred HHHHHHHHHHHHHHhcCC---CCEEEEEcccchHHHhcCCCCCcchhhhhhccChHHHHHHHHHhCCCEEEECCccCCC
Confidence 126788999999987743 2389999999854211 11110 01124789999999999999999999854
|
Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system. |
| >COG1409 Icc Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.3e-15 Score=148.00 Aligned_cols=179 Identities=20% Similarity=0.294 Sum_probs=119.2
Q ss_pred eEEEEEecCCCC--CC-h----HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCC
Q 012895 148 IEFAIVGDLGQT--EW-T----NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIES 220 (454)
Q Consensus 148 ~~f~~igD~~~~--~~-~----~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~ 220 (454)
+||++|+|.|.. .. . ..+++.++..+||+||++||+++. +....++...++++......|++++|||||...
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~-~~~~~~~~~~~~l~~~~~~~~~~~vpGNHD~~~ 79 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTND-GEPEEYRRLKELLARLELPAPVIVVPGNHDARV 79 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCC-CCHHHHHHHHHHHhhccCCCceEeeCCCCcCCc
Confidence 589999999987 22 2 245567778899999999999987 445566666677774444589999999999853
Q ss_pred CCCCCcchhhhhhhhccCCCCCCCCCCCceEEEEe-CeEEEEEecccCC----CCCCHHHHHHHHHHHHhhccCCCCeEE
Q 012895 221 IPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDI-AGAHIIMLGSYTD----FDEDSAQYKWLKADLAKINRKKTPWIF 295 (454)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~-g~v~fi~Lds~~~----~~~~~~Q~~WL~~~L~~~~~~~~~w~I 295 (454)
. ....+...+.... ..+..... ++++++.+|+... ...+..|++||++.|++........+|
T Consensus 80 ~------~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~d~~~~~~~~G~~~~~q~~~l~~~l~~~~~~~~~~~v 146 (301)
T COG1409 80 V------NGEAFSDQFFNRY-------AVLVGACSSGGWRVIGLDSSVPGVPLGRLGAEQLDWLEEALAAAPERAKDTVV 146 (301)
T ss_pred h------HHHHhhhhhcccC-------cceEeeccCCceEEEEecCCCCCCCCCEECHHHHHHHHHHHHhCccccCceEE
Confidence 2 2223332222111 11111122 5689999998643 235699999999999987553112356
Q ss_pred EEEccccccCCCCCCCCcHHHHHHHHHHHHhcC--CcEEEecccccc
Q 012895 296 VLLHAPWYNTNTAHQGEGESMRNSMEELLYNAR--VDVVFAGHVHAY 340 (454)
Q Consensus 296 v~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~--v~lvl~GH~H~y 340 (454)
+++|+|+.................+..++..++ ++++|+||.|..
T Consensus 147 ~~~hh~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~vl~GH~H~~ 193 (301)
T COG1409 147 VLHHHPLPSPGTGVDRVALRDAGELLDVLIAHGNDVRLVLSGHIHLA 193 (301)
T ss_pred EecCCCCCCCCCccceeeeecchhHHHHHHhcCCceEEEEeCccccc
Confidence 676777655443322222233456777778888 999999999975
|
|
| >cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.64 E-value=4.3e-15 Score=138.41 Aligned_cols=185 Identities=17% Similarity=0.140 Sum_probs=112.6
Q ss_pred CeEEEEEecCCCCCCh-----HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCC
Q 012895 147 PIEFAIVGDLGQTEWT-----NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESI 221 (454)
Q Consensus 147 ~~~f~~igD~~~~~~~-----~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~ 221 (454)
++||++++|+|..... +++++.+.+.+||+||++||+++...... +.+.+.++.+....|+++++||||+...
T Consensus 1 ~~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~--~~~~~~l~~l~~~~~v~~v~GNHD~~~~ 78 (223)
T cd07385 1 GLRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVDVL--ELLLELLKKLKAPLGVYAVLGNHDYYSG 78 (223)
T ss_pred CCEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcchhh--HHHHHHHhccCCCCCEEEECCCcccccC
Confidence 4899999999986542 45666777889999999999998665432 3445556666556899999999999643
Q ss_pred CCCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEE--EEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEEEEEc
Q 012895 222 PIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHI--IMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLH 299 (454)
Q Consensus 222 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~f--i~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H 299 (454)
.. ..+....+...+.. -.+....++.++..+ +.++.. ....+++.+.+++.+. .++.|++.|
T Consensus 79 ~~---~~~~~~l~~~~v~~-----L~~~~~~~~~~~~~i~i~G~~~~------~~~~~~~~~~~~~~~~--~~~~I~l~H 142 (223)
T cd07385 79 DE---ENWIEALESAGITV-----LRNESVEISVGGATIGIAGVDDG------LGRRPDLEKALKGLDE--DDPNILLAH 142 (223)
T ss_pred ch---HHHHHHHHHcCCEE-----eecCcEEeccCCeEEEEEeccCc------cccCCCHHHHHhCCCC--CCCEEEEec
Confidence 22 01011111111111 012344555555443 333211 2223456666665433 346899999
Q ss_pred cccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCC--------------cCCCCcEEEEECCCC
Q 012895 300 APWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNK--------------ADPCGPIYITIGDGG 365 (454)
Q Consensus 300 ~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~--------------~~~~g~~yi~~G~gG 365 (454)
.|.+. .. +.+.++|++++||+|..|...+..... ...+..+||+.|.|.
T Consensus 143 ~P~~~----------------~~-~~~~~~dl~l~GHtHggqi~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~Vs~G~G~ 205 (223)
T cd07385 143 QPDTA----------------EE-AAAWGVDLQLSGHTHGGQIRLPGIGPLVLSKLARPYDYGLYRKGGSQLYVSRGLGT 205 (223)
T ss_pred CCChh----------------HH-hcccCccEEEeccCCCCEEeccccccccchhhcCcccceEEEECCEEEEEcCCccC
Confidence 98431 11 156789999999999988766543220 112346677777765
Q ss_pred C
Q 012895 366 N 366 (454)
Q Consensus 366 ~ 366 (454)
.
T Consensus 206 ~ 206 (223)
T cd07385 206 W 206 (223)
T ss_pred C
Confidence 4
|
YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia |
| >cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.8e-14 Score=132.70 Aligned_cols=173 Identities=11% Similarity=0.073 Sum_probs=105.2
Q ss_pred CCeEEEEEecCCCCCCh-HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhc-CCCeeecCCCcccCCCCC
Q 012895 146 FPIEFAIVGDLGQTEWT-NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYAS-SRPWMVTEGNHEIESIPI 223 (454)
Q Consensus 146 ~~~~f~~igD~~~~~~~-~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~-~~P~~~v~GNHD~~~~~~ 223 (454)
.+.|++++||+|.+... +++++.+++.++|+||++||+++.+.....+. ++++.+.. ..|+++++||||..
T Consensus 3 ~~~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~---~~l~~l~~l~~pv~~V~GNhD~~---- 75 (224)
T cd07388 3 TVRYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYA---AFFRILGEAHLPTFYVPGPQDAP---- 75 (224)
T ss_pred ceeEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHH---HHHHHHHhcCCceEEEcCCCChH----
Confidence 45789999999965322 34455555679999999999998653223333 33444433 27999999999972
Q ss_pred CCcchhhhhhhhcc----CCCCCCCCCCCceEEEEe-CeEEEEEecccCCC--CCCHHHH----HHHHH-HHHhhccCCC
Q 012895 224 ILPHAFKAYNARWL----MPYEESGSSSNLYYSFDI-AGAHIIMLGSYTDF--DEDSAQY----KWLKA-DLAKINRKKT 291 (454)
Q Consensus 224 ~~~~~~~~~~~~~~----~p~~~~~~~~~~~ys~~~-g~v~fi~Lds~~~~--~~~~~Q~----~WL~~-~L~~~~~~~~ 291 (454)
-.....+.|. .|.... - ... ...+ |+++|++|+..... ...++|. +||.+ .|+.......
T Consensus 76 ----v~~~l~~~~~~~~~~p~~~~-l-h~~--~~~~~g~~~~~GlGGs~~~~~e~sE~e~~~~~~~~~~~~l~~~~~~~~ 147 (224)
T cd07388 76 ----LWEYLREAYNAELVHPEIRN-V-HET--FAFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWELKD 147 (224)
T ss_pred ----HHHHHHHHhcccccCcccee-c-CCC--eEEecCCeEEEEecCCcCCCCCcCHHHHhhhhhhHHHHHHHHHHhCCC
Confidence 0111111221 121000 0 111 2334 55999999854332 2345542 56544 2222211122
Q ss_pred CeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccc
Q 012895 292 PWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVH 338 (454)
Q Consensus 292 ~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H 338 (454)
+..|+++|+||+..+..| .....+.++++++++.+++|||+|
T Consensus 148 ~~~VLv~H~PP~g~g~~h-----~GS~alr~~I~~~~P~l~i~GHih 189 (224)
T cd07388 148 YRKVFLFHTPPYHKGLNE-----QGSHEVAHLIKTHNPLVVLVGGKG 189 (224)
T ss_pred CCeEEEECCCCCCCCCCc-----cCHHHHHHHHHHhCCCEEEEcCCc
Confidence 348999999999874323 235788899999999999999999
|
This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets, |
| >cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.61 E-value=9.7e-15 Score=126.43 Aligned_cols=131 Identities=22% Similarity=0.296 Sum_probs=94.1
Q ss_pred EEEEecCCCCCChH-----------HHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcC-CCeeecCCCcc
Q 012895 150 FAIVGDLGQTEWTN-----------STLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASS-RPWMVTEGNHE 217 (454)
Q Consensus 150 f~~igD~~~~~~~~-----------~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~-~P~~~v~GNHD 217 (454)
|++++|+|.+.... .+++.+...++|+|+++||+++... ...|+.+.++++++... .|++.++||||
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~-~~~~~~~~~~~~~l~~~~~~~~~v~GNHD 79 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQRGL-PEEFEEAREFLDALPAPLEPVLVVPGNHD 79 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCCCC-HHHHHHHHHHHHHccccCCcEEEeCCCCe
Confidence 57899999865421 1345556789999999999998654 45677777778877654 69999999999
Q ss_pred cCCCCCCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEEEE
Q 012895 218 IESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVL 297 (454)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~ 297 (454)
. |++
T Consensus 80 ~----------------------------------------------------------------------------iv~ 83 (144)
T cd07400 80 V----------------------------------------------------------------------------IVV 83 (144)
T ss_pred E----------------------------------------------------------------------------EEE
Confidence 5 899
Q ss_pred EccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCCcCCCCcEEEEEC
Q 012895 298 LHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIG 362 (454)
Q Consensus 298 ~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G 362 (454)
+|+|++.......... ..++.+.+++.+++++++++||+|......-. ...+++.++.+|
T Consensus 84 ~Hhp~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~l~GH~H~~~~~~~~----~~~~~~~~~~aG 143 (144)
T cd07400 84 LHHPLVPPPGSGRERL-LDAGDALKLLAEAGVDLVLHGHKHVPYVGNIS----NAGGGLVVIGAG 143 (144)
T ss_pred ecCCCCCCCccccccC-CCHHHHHHHHHHcCCCEEEECCCCCcCeeecc----CCCCCEEEEecC
Confidence 9999977644221111 14578999999999999999999996544311 113455666555
|
YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv |
| >PRK11340 phosphodiesterase YaeI; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=5e-14 Score=134.92 Aligned_cols=168 Identities=17% Similarity=0.180 Sum_probs=100.4
Q ss_pred CCCCeEEEEEecCCCCCC-----hHHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCccc
Q 012895 144 ANFPIEFAIVGDLGQTEW-----TNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEI 218 (454)
Q Consensus 144 ~~~~~~f~~igD~~~~~~-----~~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 218 (454)
...++|+++++|+|.... ..++++.+++.+||+|+++||+++.+.. ..++.+.+.++.+.+..|+|+++||||+
T Consensus 46 ~~~~~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~~-~~~~~~~~~L~~L~~~~pv~~V~GNHD~ 124 (271)
T PRK11340 46 NAAPFKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMP-LNFSAFSDVLSPLAECAPTFACFGNHDR 124 (271)
T ss_pred CCCCcEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCcc-ccHHHHHHHHHHHhhcCCEEEecCCCCc
Confidence 356799999999998632 2345566678899999999999973322 2345566777777766899999999998
Q ss_pred CCCCCCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCe--EEEEEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEEE
Q 012895 219 ESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAG--AHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFV 296 (454)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~--v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv 296 (454)
...... ...+....+...+.. -.+....+..++ +.++++|.... +... ..+.+++ . ..+|+
T Consensus 125 ~~~~~~-~~~~~~~l~~~gi~l-----L~n~~~~i~~~~~~i~i~G~~d~~~---~~~~---~~~~~~~----~-~~~Il 187 (271)
T PRK11340 125 PVGTEK-NHLIGETLKSAGITV-----LFNQATVIATPNRQFELVGTGDLWA---GQCK---PPPASEA----N-LPRLV 187 (271)
T ss_pred ccCccc-hHHHHHHHHhcCcEE-----eeCCeEEEeeCCcEEEEEEecchhc---cCCC---hhHhcCC----C-CCeEE
Confidence 432110 001111111111110 013344455443 66777763211 1101 1111211 2 24899
Q ss_pred EEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecc
Q 012895 297 LLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRI 346 (454)
Q Consensus 297 ~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~ 346 (454)
+.|.|-+- +.+.+.++|++||||+|.-|...|.
T Consensus 188 L~H~P~~~-----------------~~~~~~~~dL~lsGHTHGGQi~lP~ 220 (271)
T PRK11340 188 LAHNPDSK-----------------EVMRDEPWDLMLCGHTHGGQLRVPL 220 (271)
T ss_pred EEcCCChh-----------------HhhccCCCCEEEeccccCCeEEccc
Confidence 99999421 1235578999999999998876553
|
|
| >cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.4e-14 Score=128.67 Aligned_cols=144 Identities=21% Similarity=0.248 Sum_probs=89.2
Q ss_pred EEEEecCCCCCChHHH-H-HHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCCCCcc
Q 012895 150 FAIVGDLGQTEWTNST-L-DHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPIILPH 227 (454)
Q Consensus 150 f~~igD~~~~~~~~~~-l-~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~ 227 (454)
|+++||+|.+...... + +.+...++|+++++||+++..... .+.. .........|+++++||||+.
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~~~-~~~~---~~~~~~~~~~v~~v~GNHD~~-------- 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTDAP-RFAP---LLLALKGFEPVIYVPGNHEFY-------- 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCcchH-HHHH---HHHhhcCCccEEEeCCCcceE--------
Confidence 5789999987543322 2 334577999999999999754332 2221 222333458999999999982
Q ss_pred hhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCC-CHHHHHHHHHHHHhhccCCCCeEEEEEccccccCC
Q 012895 228 AFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDE-DSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTN 306 (454)
Q Consensus 228 ~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~-~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~ 306 (454)
+.|++..-..++.. ..++.+|+.+++. +.+||++|+|++...
T Consensus 69 ------------------------------~~~~G~~~w~~~~~~~~~~~~~~~~d~~-------~~~vv~~HhpP~~~~ 111 (166)
T cd07404 69 ------------------------------VRIIGTTLWSDISLFGEAAARMRMNDFR-------GKTVVVTHHAPSPLS 111 (166)
T ss_pred ------------------------------EEEEeeecccccCccchHHHHhCCCCCC-------CCEEEEeCCCCCccc
Confidence 22222221112211 2344555555444 238999999998764
Q ss_pred CCCC---C-CcHHHHHHHHHHHHhcCCcEEEeccccccee
Q 012895 307 TAHQ---G-EGESMRNSMEELLYNARVDVVFAGHVHAYER 342 (454)
Q Consensus 307 ~~~~---~-~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r 342 (454)
.... . .....++.+.+++++.+|++++|||+|....
T Consensus 112 ~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~i~GH~H~~~~ 151 (166)
T cd07404 112 LAPQYGDSLVNAAFAVDLDDLILADPIDLWIHGHTHFNFD 151 (166)
T ss_pred cCccccCCCcchhhhhccHhHHhhcCCCEEEECCccccce
Confidence 3221 1 1123456677888889999999999998643
|
MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t |
| >KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.54 E-value=2e-12 Score=121.58 Aligned_cols=262 Identities=21% Similarity=0.279 Sum_probs=142.0
Q ss_pred eeEEECCCCCCCeEEEEEecCCCCCC--------------------hHHHHHHh-hcCCCCeEeecCccccCCCChhhHH
Q 012895 136 EFSFKMPPANFPIEFAIVGDLGQTEW--------------------TNSTLDHV-GSKDYDVFLLPGDLSYADFQQPLWD 194 (454)
Q Consensus 136 ~~~F~T~p~~~~~~f~~igD~~~~~~--------------------~~~~l~~i-~~~~pd~vl~~GDl~y~~~~~~~~~ 194 (454)
.++|+. .++||++.++|+|.+.. ..+.++++ +.++||||+++||+++....+..-.
T Consensus 45 ~lr~~~---~g~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g~~t~Da~~ 121 (379)
T KOG1432|consen 45 KLRFRE---DGTFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFGHSTQDAAT 121 (379)
T ss_pred eeeecC---CCceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCcccccccHhHHH
Confidence 455554 78899999999987643 11234443 5899999999999999755443333
Q ss_pred HHhhhhhhhh-cCCCeeecCCCcccCCCCCCCcchhhhhhhhccCCCCCC--CCCCCceE-EEEeCe-------------
Q 012895 195 SFGRLVEPYA-SSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEES--GSSSNLYY-SFDIAG------------- 257 (454)
Q Consensus 195 ~~~~~~~~l~-~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~--~~~~~~~y-s~~~g~------------- 257 (454)
.+.+.+.+.- .++||.+++||||-..... ...+..+.. .+|..-+ .+....-| -..+|+
T Consensus 122 sl~kAvaP~I~~~IPwA~~lGNHDdes~lt--r~ql~~~i~--~lP~s~~~v~p~dg~~~~~~g~gnyn~~i~~~~ds~~ 197 (379)
T KOG1432|consen 122 SLMKAVAPAIDRKIPWAAVLGNHDDESDLT--RLQLMKFIS--KLPYSLSQVNPPDGHMYIIDGFGNYNLQIEGAIDSEL 197 (379)
T ss_pred HHHHHhhhHhhcCCCeEEEecccccccccC--HHHHHHHHh--cCCCccccCCCcccceeeeecccceEEEeccCCCccc
Confidence 4555666644 4599999999999865432 111222211 1222110 00011111 111111
Q ss_pred -----EEEEEecccCC---------CC-CCHHHHHHHHHHHHhh---ccCCCC-eEEEEEccccc--cCCCC---C---C
Q 012895 258 -----AHIIMLGSYTD---------FD-EDSAQYKWLKADLAKI---NRKKTP-WIFVLLHAPWY--NTNTA---H---Q 310 (454)
Q Consensus 258 -----v~fi~Lds~~~---------~~-~~~~Q~~WL~~~L~~~---~~~~~~-w~Iv~~H~P~~--~~~~~---~---~ 310 (454)
..+++||+... |+ ..+.|..||+..-.+- +.+-.| --+++.|.|+- ..-.. . .
T Consensus 198 ~~~sv~~lyfld~~~~~s~~~~~~~Ydwik~sq~~wl~~~~~~~~~~~~~~~P~p~La~~HIP~~E~~~~~~~tp~~g~~ 277 (379)
T KOG1432|consen 198 ENKSVFNLYFLDSSSYTSVPPLLPGYDWIKESQLEWLSDTSKEFKEPNSKYNPQPGLAFFHIPLPEFLELESKTPLIGVF 277 (379)
T ss_pred ccCceeeEEEEecCCcccccccccCccchhhhhHHHHhhhhhhhhcccCccCCCCceEEEEcccHHHhhccCCCccccee
Confidence 34556665321 11 2578999999877331 111112 36899999962 21111 0 0
Q ss_pred CCc---HHHHHHHHHHHH-hcCCcEEEecccccceeeecccCCCcCCCCcEEEEECCCCCCCCcccccCCCCCCCceeee
Q 012895 311 GEG---ESMRNSMEELLY-NARVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQE 386 (454)
Q Consensus 311 ~~~---~~~~~~l~~ll~-~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~ 386 (454)
.++ ......+...|. .-+|++|+|||+|...--.+. ++.++++=|+|+...| +. .+.|. |
T Consensus 278 ~E~~~~~~~~sg~~~~L~~r~~Vk~vf~GHdHvNDfC~~~-------k~~~wlCygGgaGygg----Yg--~~gw~--R- 341 (379)
T KOG1432|consen 278 QEGVSASKHNSGFLTTLVNRGNVKGVFCGHDHVNDFCGEL-------KGELWLCYGGGAGYGG----YG--IGGWE--R- 341 (379)
T ss_pred eccccccccccHHHHHHHhccCcceEEeccccccceeccc-------CCeEEEEecCCCccCC----cC--cCCcc--c-
Confidence 011 122345556665 778999999999997655543 3547777665543322 11 12221 1
Q ss_pred cccCEEEEEEecCCeEEEEEEEecCCCceeeeEEEEE
Q 012895 387 SSFGHARLKILDETRAHWSWYRNNDSDAVIADEVRLE 423 (454)
Q Consensus 387 ~~~G~~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i~ 423 (454)
+-..+++.....-.-+|+|.+|+.-.++|.-.+-
T Consensus 342 ---r~Rv~e~d~~~~~IkTWKRl~d~~~~~~D~q~l~ 375 (379)
T KOG1432|consen 342 ---RARVFELDLNKDRIKTWKRLDDKPLSVIDYQLLY 375 (379)
T ss_pred ---ceEEEEccccccccceeeecCCCCcceeeeEEEe
Confidence 1123444222222346899988765566765443
|
|
| >cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.54 E-value=7.2e-14 Score=129.98 Aligned_cols=186 Identities=16% Similarity=0.103 Sum_probs=106.1
Q ss_pred EEEEEecCCCCCCh----------------HHHHHHhhcCCCCeEeecCccccCCCC-hhhHHHHhhhhhhhh-cCCCee
Q 012895 149 EFAIVGDLGQTEWT----------------NSTLDHVGSKDYDVFLLPGDLSYADFQ-QPLWDSFGRLVEPYA-SSRPWM 210 (454)
Q Consensus 149 ~f~~igD~~~~~~~----------------~~~l~~i~~~~pd~vl~~GDl~y~~~~-~~~~~~~~~~~~~l~-~~~P~~ 210 (454)
||++++|+|.+... .++++.+.+.+||+||++||+++.... ...+..+.+.++.+. ..+|++
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPVF 80 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCEE
Confidence 68999999986431 234455567899999999999986543 334556666666665 358999
Q ss_pred ecCCCcccCCCCCCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhccCC
Q 012895 211 VTEGNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKK 290 (454)
Q Consensus 211 ~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~ 290 (454)
+++||||....... ......+.. +................++..++.|++++..... ....+.++++..+.... .
T Consensus 81 ~~~GNHD~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~i~g~~~~~~~-~~~~~~~~~~~~~~~~~--~ 155 (223)
T cd00840 81 IIAGNHDSPSRLGA-LSPLLALSG-LHLVGVEEDVLTPLLLPKGGTGVAIYGLPYLRRS-RLRDLLADAELRPRPLD--P 155 (223)
T ss_pred EecCCCCCcccccc-ccchHhhCc-EEEEcccCcceeEEEeccCCeEEEEEECCCCCHH-HHHHHHHHHHHHhhccC--C
Confidence 99999999643221 000111110 0000000000011222334556888888753221 11233444444444433 2
Q ss_pred CCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceee
Q 012895 291 TPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERF 343 (454)
Q Consensus 291 ~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~ 343 (454)
....|+++|.|+.......... .......+...++|++++||.|..+..
T Consensus 156 ~~~~Il~~H~~~~~~~~~~~~~----~~~~~~~~~~~~~d~v~~GH~H~~~~~ 204 (223)
T cd00840 156 DDFNILLLHGGVAGAGPSDSER----APFVPEALLPAGFDYVALGHIHRPQII 204 (223)
T ss_pred CCcEEEEEeeeeecCCCCcccc----cccCcHhhcCcCCCEEECCCcccCeee
Confidence 3458999999976543321110 123344456788999999999986543
|
Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi |
| >TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family | Back alignment and domain information |
|---|
Probab=99.50 E-value=6.4e-13 Score=131.12 Aligned_cols=92 Identities=21% Similarity=0.258 Sum_probs=64.7
Q ss_pred CceEEEE-eCe--EEEEEecccCC-----------CCCCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCC----
Q 012895 248 NLYYSFD-IAG--AHIIMLGSYTD-----------FDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAH---- 309 (454)
Q Consensus 248 ~~~ys~~-~g~--v~fi~Lds~~~-----------~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~---- 309 (454)
..||+|+ .++ +++|+||+... -...++|++||+++|++... +.+++|+++|+|+.......
T Consensus 292 ~~yYsFd~~g~vplrvIvLDSt~~~~~~s~pG~~~G~Ld~eQLaWLe~~La~a~a-~~p~VVV~hHpPi~t~gi~~md~w 370 (492)
T TIGR03768 292 FACYSFVPKSDVPLKVIVLDDTQSEHDGSHDIHGHGSLDAKRWDWLKAELARGQA-DGQLMIIAAHIPIAVSPIGSEMEW 370 (492)
T ss_pred cceeEEecCCCcceEEEEECCCccccccCCCCCcceeeCHHHHHHHHHHHHhCcC-CCceEEEEeCCCcccCCccchhhh
Confidence 4599999 574 49999998641 11459999999999998864 44667888888876422211
Q ss_pred C---------CCcHHHHHHHHHHHHhc-CCcEEEecccccc
Q 012895 310 Q---------GEGESMRNSMEELLYNA-RVDVVFAGHVHAY 340 (454)
Q Consensus 310 ~---------~~~~~~~~~l~~ll~~~-~v~lvl~GH~H~y 340 (454)
. ........+|..+|.+| +|.++||||.|..
T Consensus 371 ~~~~~~~~~~L~n~~~~~eLlaLL~~hPnVla~LsGHvHrn 411 (492)
T TIGR03768 371 WLGAADANPDLQNAVSLTGLVTTLQKYPNLLMWIAGHRHLN 411 (492)
T ss_pred ccccccccccccccccHHHHHHHHhcCCCeEEEEcCCcccc
Confidence 0 00011124899999999 5889999999963
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes. |
| >PF14008 Metallophos_C: Iron/zinc purple acid phosphatase-like protein C; PDB: 3KBP_B 1KBP_B 4KBP_C 2QFP_B 2QFR_A 1XZW_B | Back alignment and domain information |
|---|
Probab=99.42 E-value=3.9e-13 Score=98.04 Aligned_cols=62 Identities=35% Similarity=0.737 Sum_probs=41.2
Q ss_pred CCcEEEEECCCCCCCCcccccCCCCCCCceeeecccCEEEEEEecCCeEEEEEEEecCCCceeeeEE
Q 012895 354 CGPIYITIGDGGNREGLALEFKEPKSPLSMFQESSFGHARLKILDETRAHWSWYRNNDSDAVIADEV 420 (454)
Q Consensus 354 ~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~~~~~~~~~~dg~~~~~D~~ 420 (454)
++|+||++|+||+ ++. .+..++|+|++++..+|||++|++.|.|+|+|+|++++||+ ++|+|
T Consensus 1 kapVhiv~G~aG~--~l~-~~~~~~~~wsa~r~~~~Gy~~l~v~N~T~l~~e~i~~~~g~--v~D~f 62 (62)
T PF14008_consen 1 KAPVHIVVGAAGN--GLD-PFPYPPPEWSAFRDSEYGYGRLTVANATHLHWEFIRSDDGS--VLDEF 62 (62)
T ss_dssp TS-EEEEE--S-T-------B-SS--TTEEEEE---EEEEEEE-SSSEEEEEEEETTS-T---CEE-
T ss_pred CCCEEEEECcCCC--Ccc-cccCCCCCeeeeeccccCEEEEEEEcCCeEEEEEEECCCCc--EecCC
Confidence 3799999999999 343 47678899999999999999999999999999999998887 99997
|
|
| >cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.36 E-value=7.8e-12 Score=105.15 Aligned_cols=116 Identities=25% Similarity=0.309 Sum_probs=83.9
Q ss_pred EEEecCCCCCChHHHH---HHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCCCCcc
Q 012895 151 AIVGDLGQTEWTNSTL---DHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPIILPH 227 (454)
Q Consensus 151 ~~igD~~~~~~~~~~l---~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~ 227 (454)
+++||+|......... ....+.++|+||++||+++....... ..+...........|+++++||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~GNHD---------- 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPDPEE-VLAAALALLLLLGIPVYVVPGNHD---------- 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCCchH-HHHHHHHHhhcCCCCEEEeCCCce----------
Confidence 4789999876544433 35567899999999999986665332 222222233334599999999999
Q ss_pred hhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCC
Q 012895 228 AFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNT 307 (454)
Q Consensus 228 ~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~ 307 (454)
|+++|.|++....
T Consensus 70 -------------------------------------------------------------------i~~~H~~~~~~~~ 82 (131)
T cd00838 70 -------------------------------------------------------------------ILLTHGPPYDPLD 82 (131)
T ss_pred -------------------------------------------------------------------EEEeccCCCCCch
Confidence 8999999876654
Q ss_pred CCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeee
Q 012895 308 AHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFT 344 (454)
Q Consensus 308 ~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~ 344 (454)
.........+..+..++.+.+++++|+||.|.+.+..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 83 ELSPDEDPGSEALLELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred hhcccchhhHHHHHHHHHHhCCCEEEeCCeecccccc
Confidence 3222222246788899999999999999999988765
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me |
| >cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.36 E-value=8.1e-12 Score=106.88 Aligned_cols=117 Identities=17% Similarity=0.203 Sum_probs=77.8
Q ss_pred EEEEEecCCCCCChHHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCCCCcch
Q 012895 149 EFAIVGDLGQTEWTNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPIILPHA 228 (454)
Q Consensus 149 ~f~~igD~~~~~~~~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~ 228 (454)
||+++||+|.... .+...++|+|+++||+++.... ..++.+.+.++.+. ..++++++||||...
T Consensus 1 ~i~~isD~H~~~~------~~~~~~~D~vi~~GD~~~~~~~-~~~~~~~~~l~~~~-~~~~~~v~GNHD~~~-------- 64 (135)
T cd07379 1 RFVCISDTHSRHR------TISIPDGDVLIHAGDLTERGTL-EELQKFLDWLKSLP-HPHKIVIAGNHDLTL-------- 64 (135)
T ss_pred CEEEEeCCCCCCC------cCcCCCCCEEEECCCCCCCCCH-HHHHHHHHHHHhCC-CCeEEEEECCCCCcC--------
Confidence 5899999997644 3345789999999999875432 33444555554442 123578999999720
Q ss_pred hhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCC
Q 012895 229 FKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTA 308 (454)
Q Consensus 229 ~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~ 308 (454)
. . . .+.|+++|.|++.....
T Consensus 65 -------------------~-------------------------------------~---~-~~~ilv~H~~p~~~~~~ 84 (135)
T cd07379 65 -------------------D-------------------------------------P---E-DTDILVTHGPPYGHLDL 84 (135)
T ss_pred -------------------C-------------------------------------C---C-CCEEEEECCCCCcCccc
Confidence 0 1 1 13789999998775432
Q ss_pred CCCCcHHHHHHHHHHHHhcCCcEEEecccccce
Q 012895 309 HQGEGESMRNSMEELLYNARVDVVFAGHVHAYE 341 (454)
Q Consensus 309 ~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~ 341 (454)
.........+.+.+++.+++++++++||+|...
T Consensus 85 ~~~~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~ 117 (135)
T cd07379 85 VSSGQRVGCEELLNRVQRVRPKLHVFGHIHEGY 117 (135)
T ss_pred cccCcccCCHHHHHHHHHHCCcEEEEcCcCCcC
Confidence 211111223567777888999999999999853
|
239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme |
| >cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.34 E-value=4.1e-11 Score=110.75 Aligned_cols=195 Identities=17% Similarity=0.199 Sum_probs=100.0
Q ss_pred eEEEEEecCCCCCChHHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCCCCcc
Q 012895 148 IEFAIVGDLGQTEWTNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPIILPH 227 (454)
Q Consensus 148 ~~f~~igD~~~~~~~~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~ 227 (454)
+|++++||+|.... ....+.++..+||+||++||+++.. ..+.+.+..+ ..|+++++||||....... ..
T Consensus 1 ~rIa~isDiHg~~~-~~~~~~l~~~~pD~Vl~~GDi~~~~------~~~~~~l~~l--~~p~~~V~GNHD~~~~~~~-~~ 70 (238)
T cd07397 1 LRIAIVGDVHGQWD-LEDIKALHLLQPDLVLFVGDFGNES------VQLVRAISSL--PLPKAVILGNHDAWYDATF-RK 70 (238)
T ss_pred CEEEEEecCCCCch-HHHHHHHhccCCCEEEECCCCCcCh------HHHHHHHHhC--CCCeEEEcCCCcccccccc-cc
Confidence 58999999997533 2334566678999999999998531 1222233322 3799999999998543210 00
Q ss_pred hhhhhhhhccCCCCCCCCCCCceE---EEEeCeEEEEEecccCC----------------CC--CCHHHHHHHHHHHHhh
Q 012895 228 AFKAYNARWLMPYEESGSSSNLYY---SFDIAGAHIIMLGSYTD----------------FD--EDSAQYKWLKADLAKI 286 (454)
Q Consensus 228 ~~~~~~~~~~~p~~~~~~~~~~~y---s~~~g~v~fi~Lds~~~----------------~~--~~~~Q~~WL~~~L~~~ 286 (454)
....+.+...... .... ..++....+.++.+... |. ..++-.+.+.+.++..
T Consensus 71 k~~~l~~~L~~lg-------~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi~s~~eA~~~ive~~~~~ 143 (238)
T cd07397 71 KGDRVQEQLELLG-------DLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGVISLEESAQRIIAAAKKA 143 (238)
T ss_pred hHHHHHHHHHHhC-------CcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCCCCHHHHHHHHHHHhhhc
Confidence 1222332221111 1111 11222222222222110 10 1123334444555433
Q ss_pred ccCCCCeEEEEEccccccCCCC--------CC----CCc-HHHHHHHHHHHHhcCCcEEEecccccceeeec-ccCC-Cc
Q 012895 287 NRKKTPWIFVLLHAPWYNTNTA--------HQ----GEG-ESMRNSMEELLYNARVDVVFAGHVHAYERFTR-IYDN-KA 351 (454)
Q Consensus 287 ~~~~~~w~Iv~~H~P~~~~~~~--------~~----~~~-~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~-~~~~-~~ 351 (454)
.. ..+ .|++.|.++...++. +. ..+ .++.+++..+-..-.++++++||.|.--+... +... ..
T Consensus 144 ~~-~~~-~VliaH~~~~G~g~~~~~~cg~d~~~~~~~~G~~~l~~ai~~~~~~~~~~l~~fGH~H~~l~~~~~~r~~~~~ 221 (238)
T cd07397 144 PP-DLP-LILLAHNGPSGLGSDAEDPCGRDWKPPGGDWGDPDLALAISQIQQGRQVPLVVFGHMHHRLRRGKGLRNMIAV 221 (238)
T ss_pred CC-CCC-eEEEeCcCCcCCCcccccccccccCCcCCCCCCHHHHHHHHHHhccCCCCEEEeCCccCcccccccccceeee
Confidence 22 223 799999998665421 10 011 24556665544334589999999998432221 1100 13
Q ss_pred CCCCcEEEEE
Q 012895 352 DPCGPIYITI 361 (454)
Q Consensus 352 ~~~g~~yi~~ 361 (454)
+..|++|+..
T Consensus 222 ~~~gt~y~N~ 231 (238)
T cd07397 222 DREGTVYLNA 231 (238)
T ss_pred cCCCeEEEec
Confidence 4578998854
|
DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy |
| >COG1408 Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.5e-11 Score=117.44 Aligned_cols=76 Identities=16% Similarity=0.181 Sum_probs=60.4
Q ss_pred CCCeEEEEEecCCCCCCh---HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCC
Q 012895 145 NFPIEFAIVGDLGQTEWT---NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESI 221 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~~---~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~ 221 (454)
..++++++++|+|..... .+.+..+.+..||+|+++||+++.. ....+..+.+.++++.+..++++++||||+...
T Consensus 42 ~~~~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~-~~~~~~~~~~~L~~L~~~~gv~av~GNHd~~~~ 120 (284)
T COG1408 42 LQGLKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGD-RPPGVAALALFLAKLKAPLGVFAVLGNHDYGVD 120 (284)
T ss_pred cCCeEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCC-CCCCHHHHHHHHHhhhccCCEEEEecccccccc
Confidence 578999999999987665 3445556678889999999999851 223456677888888888999999999999643
|
|
| >PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [] | Back alignment and domain information |
|---|
Probab=99.23 E-value=5e-11 Score=104.25 Aligned_cols=138 Identities=23% Similarity=0.319 Sum_probs=81.4
Q ss_pred eEEEEEecCCCCCCh-HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCCCCc
Q 012895 148 IEFAIVGDLGQTEWT-NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPIILP 226 (454)
Q Consensus 148 ~~f~~igD~~~~~~~-~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~ 226 (454)
+||+++||+|..... .++++.+ .++|+|+++||+++. ..+.+.++.+ |++++.||||..
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~~-------~~~~~~~~~~----~~~~v~GNHD~~------- 60 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFDP-------EEVLELLRDI----PVYVVRGNHDNW------- 60 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCSH-------HHHHHHHHHH----EEEEE--CCHST-------
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchhH-------HHHHHHHhcC----CEEEEeCCcccc-------
Confidence 699999999986432 3566666 579999999999862 3333333333 899999999962
Q ss_pred chhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCC
Q 012895 227 HAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTN 306 (454)
Q Consensus 227 ~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~ 306 (454)
. +....... + .+......-....|+++|.+++...
T Consensus 61 -~---~~~~~~~~----------~-------------------------------~~~~~~~~~~~~~i~~~H~~~~~~~ 95 (156)
T PF12850_consen 61 -A---FPNENDEE----------Y-------------------------------LLDALRLTIDGFKILLSHGHPYDVQ 95 (156)
T ss_dssp -H---HHSEECTC----------S-------------------------------SHSEEEEEETTEEEEEESSTSSSST
T ss_pred -c---chhhhhcc----------c-------------------------------cccceeeeecCCeEEEECCCCcccc
Confidence 1 11111000 0 0000000011347889998766532
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCCcCCCCcEEEEECCCCC
Q 012895 307 TAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGGN 366 (454)
Q Consensus 307 ~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~ 366 (454)
...+.+..++...+++++++||.|..+... .+++.++..|+-+.
T Consensus 96 --------~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~--------~~~~~~~~~Gs~~~ 139 (156)
T PF12850_consen 96 --------WDPAELREILSRENVDLVLHGHTHRPQVFK--------IGGIHVINPGSIGG 139 (156)
T ss_dssp --------TTHHHHHHHHHHTTSSEEEESSSSSEEEEE--------ETTEEEEEE-GSSS
T ss_pred --------cChhhhhhhhcccCCCEEEcCCcccceEEE--------ECCEEEEECCcCCC
Confidence 123456677789999999999999976654 24677787776543
|
; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A .... |
| >cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.23 E-value=6.6e-11 Score=105.94 Aligned_cols=108 Identities=14% Similarity=0.248 Sum_probs=70.0
Q ss_pred hhcCCCCeEeecCccccCCCCh--hhHHHHhhhhhhh---hcCCCeeecCCCcccCCCCCC-CcchhhhhhhhccCCCCC
Q 012895 169 VGSKDYDVFLLPGDLSYADFQQ--PLWDSFGRLVEPY---ASSRPWMVTEGNHEIESIPII-LPHAFKAYNARWLMPYEE 242 (454)
Q Consensus 169 i~~~~pd~vl~~GDl~y~~~~~--~~~~~~~~~~~~l---~~~~P~~~v~GNHD~~~~~~~-~~~~~~~~~~~~~~p~~~ 242 (454)
+...+||+|+++||+++.+... .+|....+.+.++ ...+|++.++||||+++.... ..+....|.+.|
T Consensus 38 ~~~l~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG~~~~~~~~~~v~RF~~~F------ 111 (195)
T cd08166 38 LNFVQPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIGGEEEDPIESKIRRFEKYF------ 111 (195)
T ss_pred HhccCCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcCCCCCCcCHHHHHHHHHhh------
Confidence 3467999999999999987652 2233322222222 224899999999999643210 011112222111
Q ss_pred CCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHH
Q 012895 243 SGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEE 322 (454)
Q Consensus 243 ~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ 322 (454)
|++.|.|+..... ..+..
T Consensus 112 ----------------------------------------------------i~lsH~P~~~~~~----------~~~~~ 129 (195)
T cd08166 112 ----------------------------------------------------IMLSHVPLLAEGG----------QALKH 129 (195)
T ss_pred ----------------------------------------------------eeeeccccccccc----------HHHHH
Confidence 8999999865332 26678
Q ss_pred HHHhcCCcEEEecccccceeee
Q 012895 323 LLYNARVDVVFAGHVHAYERFT 344 (454)
Q Consensus 323 ll~~~~v~lvl~GH~H~y~r~~ 344 (454)
++.+++++++|+||.|.+....
T Consensus 130 ~~~~~~p~~Ifs~H~H~s~~~~ 151 (195)
T cd08166 130 VVTDLDPDLIFSAHRHKSSIFM 151 (195)
T ss_pred HHHhcCceEEEEcCccceeeEE
Confidence 8899999999999999976554
|
A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R |
| >KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.22 E-value=3.9e-10 Score=114.09 Aligned_cols=172 Identities=24% Similarity=0.374 Sum_probs=104.2
Q ss_pred HHHHHhh--cCCCCeEeecCccccCCCChh----hH---HHHhhhhhhhhcCCCeeecCCCcccCCCCCCCc-----c--
Q 012895 164 STLDHVG--SKDYDVFLLPGDLSYADFQQP----LW---DSFGRLVEPYASSRPWMVTEGNHEIESIPIILP-----H-- 227 (454)
Q Consensus 164 ~~l~~i~--~~~pd~vl~~GDl~y~~~~~~----~~---~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~-----~-- 227 (454)
.+|++|+ ..++|+|+++||++..+.+.. .. ..+.+.+......+|+|+..||||......+.. .
T Consensus 199 s~L~~ike~~~~iD~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N~F~~~~~~~~~~ 278 (577)
T KOG3770|consen 199 SALDHIKENHKDIDYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVNLFAPGSVPKRHS 278 (577)
T ss_pred HHHHHHHhcCCCCCEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHhhcCCCCCcchhh
Confidence 4677776 334999999999998764411 11 122334444455799999999999975433211 1
Q ss_pred ---hhhhhhhhcc--CCCCCC-CCCCCceEE-EEeCeEEEEEecccCCC----------CCCHHHHHHHHHHHHhhccCC
Q 012895 228 ---AFKAYNARWL--MPYEES-GSSSNLYYS-FDIAGAHIIMLGSYTDF----------DEDSAQYKWLKADLAKINRKK 290 (454)
Q Consensus 228 ---~~~~~~~~~~--~p~~~~-~~~~~~~ys-~~~g~v~fi~Lds~~~~----------~~~~~Q~~WL~~~L~~~~~~~ 290 (454)
-|..+...|. +|.++. ....+.+|. ..+++.++|.||+..-+ .....|++|+..+|.+++.++
T Consensus 279 ~~wly~~~~~~W~~wlp~e~~~t~~kga~Y~~~~~~Glr~IslNt~~c~~~N~~L~~n~tdp~~~lqWf~~~L~~ae~~G 358 (577)
T KOG3770|consen 279 QLWLYKHLAGAWSTWLPAEAKETFLKGAYYLVLVIDGLRLISLNTNYCSAPNFWLYANQTDPIDQLQWFVDQLQEAESAG 358 (577)
T ss_pred hhHHHHHHHhhhhccCCHHHHhhhhcCcEEEEeecCCceEEEeccccccccceeeeecCCCchHHhhHHHHHHHHHHhcC
Confidence 0112222221 233211 112345565 44688999999985321 235788999999999987655
Q ss_pred CCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcC--CcEEEecccccce
Q 012895 291 TPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNAR--VDVVFAGHVHAYE 341 (454)
Q Consensus 291 ~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~--v~lvl~GH~H~y~ 341 (454)
.+ |=+++|.|+-.. ....+. ...+-.++.++. +...|.||.|.-+
T Consensus 359 ek-Vhil~HIPpG~~-~c~~~w----s~~f~~iv~r~~~tI~gqf~GH~h~d~ 405 (577)
T KOG3770|consen 359 EK-VHILGHIPPGDG-VCLEGW----SINFYRIVNRFRSTIAGQFYGHTHIDE 405 (577)
T ss_pred CE-EEEEEeeCCCCc-chhhhh----hHHHHHHHHHHHHhhhhhccccCccee
Confidence 44 889999997431 111122 234555555553 6678999999844
|
|
| >PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.9e-10 Score=108.38 Aligned_cols=174 Identities=17% Similarity=0.191 Sum_probs=92.1
Q ss_pred eEEEEEecCCCCCChH----HHHHHhh--cCCCCeEeecCccccCC----CChhhHHHHhhhhhhhhcC-CCeeecCCCc
Q 012895 148 IEFAIVGDLGQTEWTN----STLDHVG--SKDYDVFLLPGDLSYAD----FQQPLWDSFGRLVEPYASS-RPWMVTEGNH 216 (454)
Q Consensus 148 ~~f~~igD~~~~~~~~----~~l~~i~--~~~pd~vl~~GDl~y~~----~~~~~~~~~~~~~~~l~~~-~P~~~v~GNH 216 (454)
+|++++||+|.+.... ..++.+. ..+||+|+++||+++.- ..........+.++.+... +|+++++|||
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~g~~v~~v~GNH 80 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGEARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDSGVPCYFMHGNR 80 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhhhccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHcCCeEEEEeCCC
Confidence 5899999999875432 2344442 46899999999999631 1122234455666666655 8999999999
Q ss_pred ccCCCCCCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEEE
Q 012895 217 EIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFV 296 (454)
Q Consensus 217 D~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv 296 (454)
|.... ..+.+...+.. -+....+++++.++++.-..... .....++++.+.+... |...
T Consensus 81 D~~~~--------~~~~~~~g~~~------l~~~~~~~~~g~~i~l~HGd~~~-~~d~~y~~~r~~~r~~------~~~~ 139 (241)
T PRK05340 81 DFLLG--------KRFAKAAGMTL------LPDPSVIDLYGQRVLLLHGDTLC-TDDKAYQRFRRKVRNP------WLQW 139 (241)
T ss_pred chhhh--------HHHHHhCCCEE------eCCcEEEEECCEEEEEECCcccc-cCCHHHHHHHHHHhCH------HHHH
Confidence 97321 11222221110 01233466777777766432111 1123333333332221 1111
Q ss_pred EEccccccCC---------------C-CCCCCcHHHHHHHHHHHHhcCCcEEEeccccccee
Q 012895 297 LLHAPWYNTN---------------T-AHQGEGESMRNSMEELLYNARVDVVFAGHVHAYER 342 (454)
Q Consensus 297 ~~H~P~~~~~---------------~-~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r 342 (454)
+.|.+++... . ..........+.+.+++.+++++++++||+|.-..
T Consensus 140 ~~~~~p~~~~~~ia~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~ 201 (241)
T PRK05340 140 LFLALPLSIRLRIAAKMRAKSKAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAI 201 (241)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCcce
Confidence 1122211100 0 00000001125677888999999999999998544
|
|
| >COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.17 E-value=7.2e-10 Score=99.60 Aligned_cols=178 Identities=19% Similarity=0.205 Sum_probs=107.7
Q ss_pred CCeEEEEEecCCCCCCh-HHHHHHhhcCCCCeEeecCccc--cCCCChhhHHHHhhhhhhhh-cCCCeeecCCCcccCCC
Q 012895 146 FPIEFAIVGDLGQTEWT-NSTLDHVGSKDYDVFLLPGDLS--YADFQQPLWDSFGRLVEPYA-SSRPWMVTEGNHEIESI 221 (454)
Q Consensus 146 ~~~~f~~igD~~~~~~~-~~~l~~i~~~~pd~vl~~GDl~--y~~~~~~~~~~~~~~~~~l~-~~~P~~~v~GNHD~~~~ 221 (454)
..+|+++++|+|..... .+.++.++..++|+++++||++ +-+.....-+.. .++.+. ..+|+++++||.|...
T Consensus 2 ~~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~~~~~~~--~~e~l~~~~~~v~avpGNcD~~~- 78 (226)
T COG2129 2 KKMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGPKEVAEELN--KLEALKELGIPVLAVPGNCDPPE- 78 (226)
T ss_pred CcceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcCchHHHHhhh--HHHHHHhcCCeEEEEcCCCChHH-
Confidence 36899999999987543 4555556677999999999999 333321111110 034444 3499999999988731
Q ss_pred CCCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEeccc--CCC----CCCHHH-HHHHHHHHHhhccCCCCeE
Q 012895 222 PIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSY--TDF----DEDSAQ-YKWLKADLAKINRKKTPWI 294 (454)
Q Consensus 222 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~--~~~----~~~~~Q-~~WL~~~L~~~~~~~~~w~ 294 (454)
-.....+ ....- .--..+++++.|+++--. +.+ ...+++ +.-|++-+...+. .-.
T Consensus 79 ------v~~~l~~-~~~~v--------~~~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~~---~~~ 140 (226)
T COG2129 79 ------VIDVLKN-AGVNV--------HGRVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKADN---PVN 140 (226)
T ss_pred ------HHHHHHh-ccccc--------ccceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhcccC---cce
Confidence 1111111 11111 114567788888875321 111 122333 2344444444422 113
Q ss_pred EEEEccccccCCCCCCCC-cHHHHHHHHHHHHhcCCcEEEecccccceeee
Q 012895 295 FVLLHAPWYNTNTAHQGE-GESMRNSMEELLYNARVDVVFAGHVHAYERFT 344 (454)
Q Consensus 295 Iv~~H~P~~~~~~~~~~~-~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~ 344 (454)
|+++|+|||+....-... .......+.+++++.++.+.+|||+|.+.-..
T Consensus 141 Il~~HaPP~gt~~d~~~g~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d 191 (226)
T COG2129 141 ILLTHAPPYGTLLDTPSGYVHVGSKAVRKLIEEFQPLLGLHGHIHESRGID 191 (226)
T ss_pred EEEecCCCCCccccCCCCccccchHHHHHHHHHhCCceEEEeeeccccccc
Confidence 999999999876542111 23456788999999999999999999854443
|
|
| >cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.16 E-value=7.9e-10 Score=103.35 Aligned_cols=157 Identities=20% Similarity=0.160 Sum_probs=102.0
Q ss_pred EEEEEecCCCCCChHHHHHHhh----cCCCCeEeecCccccCCCC-------------------------hhhHHHH--h
Q 012895 149 EFAIVGDLGQTEWTNSTLDHVG----SKDYDVFLLPGDLSYADFQ-------------------------QPLWDSF--G 197 (454)
Q Consensus 149 ~f~~igD~~~~~~~~~~l~~i~----~~~pd~vl~~GDl~y~~~~-------------------------~~~~~~~--~ 197 (454)
||++.|+.+...........+. +.+||++|++||.+|++.. ...|..+ .
T Consensus 1 r~a~~SC~~~~~~~~~~~~~~~~~~~~~~~d~~l~~GD~IY~d~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Y~~~~~~ 80 (228)
T cd07389 1 RFAFGSCNKYESGYFNAYRALAYDHSEEDPDLFLHLGDQIYADDVGGLMPALIEGRPLEPAHEALTLEEYRERYRQYRSD 80 (228)
T ss_pred CEEEEECCCCCCCCcHHHHHHhhhccccCCCEEEEcCCeecccCCCcccccccCCcCcCCcccccCHHHHHHHHHHHcCC
Confidence 5888999877665555555664 7899999999999998852 0111111 1
Q ss_pred hhhhhhhcCCCeeecCCCcccCCCCCCC--------------cchhhhhhhhccCCCCCCC--CCCCceEEEEeCeE-EE
Q 012895 198 RLVEPYASSRPWMVTEGNHEIESIPIIL--------------PHAFKAYNARWLMPYEESG--SSSNLYYSFDIAGA-HI 260 (454)
Q Consensus 198 ~~~~~l~~~~P~~~v~GNHD~~~~~~~~--------------~~~~~~~~~~~~~p~~~~~--~~~~~~ys~~~g~v-~f 260 (454)
..++.+.+.+|++.++++||+.++.... ......|.+..+.+..... .....|+++.+|.. .|
T Consensus 81 p~~~~~~~~~p~~~iwDDHDi~~n~~~~~~~~~~~~~~~~~~~~a~~ay~e~~~~~~~~~~~~~~~~~y~~~~~G~~~~~ 160 (228)
T cd07389 81 PDLQRLLAQVPTIGIWDDHDIGDNWGGDGAWVQDSPVFYARKAAARQAYLEFQPVRNPSPRRGGRGGIYRSFRFGDLVDL 160 (228)
T ss_pred HHHHHHhhcCCEEEeccccccccccccccccccCcchHHHHHHHHHHHHHHHcCCCCCCccCCCCceEEEEEecCCcceE
Confidence 2345566779999999999997653320 1123345555544433222 23578999999996 99
Q ss_pred EEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcC--CcEEEecccc
Q 012895 261 IMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNAR--VDVVFAGHVH 338 (454)
Q Consensus 261 i~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~--v~lvl~GH~H 338 (454)
++||+.... ..+ ......|+++..++.+.+ -.++|+|++|
T Consensus 161 ~~lD~R~~R-------------------------------------d~W-~~~~~er~~l~~~~~~~~~~~vv~lSGDvH 202 (228)
T cd07389 161 ILLDTRTYR-------------------------------------DSW-DGYPAERERLLDLLAKRKIKNVVFLSGDVH 202 (228)
T ss_pred EEEeccccc-------------------------------------ccc-cccHHHHHHHHHHHHHhCCCCeEEEecHHH
Confidence 999987643 111 112346777777755543 3389999999
Q ss_pred cceee
Q 012895 339 AYERF 343 (454)
Q Consensus 339 ~y~r~ 343 (454)
.....
T Consensus 203 ~~~~~ 207 (228)
T cd07389 203 LAEAS 207 (228)
T ss_pred HHHHh
Confidence 85443
|
PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF |
| >cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.8e-10 Score=100.84 Aligned_cols=51 Identities=24% Similarity=0.303 Sum_probs=35.1
Q ss_pred hhcCCCCeEeecCccccCCCC--hhhHHHHhhhhhhhhc---CCCeeecCCCcccC
Q 012895 169 VGSKDYDVFLLPGDLSYADFQ--QPLWDSFGRLVEPYAS---SRPWMVTEGNHEIE 219 (454)
Q Consensus 169 i~~~~pd~vl~~GDl~y~~~~--~~~~~~~~~~~~~l~~---~~P~~~v~GNHD~~ 219 (454)
+.+.+||+|+++||+++.... ...|..+...+..+.. ..|+++++||||..
T Consensus 34 i~~~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 34 LWLLQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG 89 (156)
T ss_pred HHhcCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence 346899999999999976543 2345443333333322 47999999999984
|
MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to |
| >cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.11 E-value=4.8e-10 Score=99.68 Aligned_cols=51 Identities=24% Similarity=0.309 Sum_probs=35.9
Q ss_pred hcCCCCeEeecCccccCCCC--hhhHHHHhhhhhhhh-------cCCCeeecCCCcccCC
Q 012895 170 GSKDYDVFLLPGDLSYADFQ--QPLWDSFGRLVEPYA-------SSRPWMVTEGNHEIES 220 (454)
Q Consensus 170 ~~~~pd~vl~~GDl~y~~~~--~~~~~~~~~~~~~l~-------~~~P~~~v~GNHD~~~ 220 (454)
...+||+|+++||+++.... ...|....+.+..+. ..+|+++++||||+..
T Consensus 42 ~~~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 42 QRLKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred HhcCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 47899999999999986543 234554443333332 1589999999999953
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit |
| >cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.10 E-value=6.7e-10 Score=97.30 Aligned_cols=131 Identities=19% Similarity=0.226 Sum_probs=79.7
Q ss_pred EEEEEecCCCCCC-hHHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCCCCcc
Q 012895 149 EFAIVGDLGQTEW-TNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPIILPH 227 (454)
Q Consensus 149 ~f~~igD~~~~~~-~~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~ 227 (454)
|++++||+|.... ..++++.++. +|.|+++||+++...... +....|++.++||||...
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~--~d~ii~~GD~~~~~~~~~-----------~~~~~~~~~V~GNhD~~~------- 60 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD--VDLIIHAGDVLYPGPLNE-----------LELKAPVIAVRGNCDGEV------- 60 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC--CCEEEECCccccccccch-----------hhcCCcEEEEeCCCCCcC-------
Confidence 5899999997642 2234444433 999999999987543211 233478999999999831
Q ss_pred hhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCC
Q 012895 228 AFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNT 307 (454)
Q Consensus 228 ~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~ 307 (454)
+ ...+|. ...++++ .++|+++|.+......
T Consensus 61 -~-----~~~~p~---------~~~~~~~-----------------------------------g~~i~v~Hg~~~~~~~ 90 (155)
T cd00841 61 -D-----FPILPE---------EAVLEIG-----------------------------------GKRIFLTHGHLYGVKN 90 (155)
T ss_pred -C-----cccCCc---------eEEEEEC-----------------------------------CEEEEEECCccccccc
Confidence 0 001121 1111111 1368888887654321
Q ss_pred CCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCCcCCCCcEEEEECCCCC
Q 012895 308 AHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGGN 366 (454)
Q Consensus 308 ~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~ 366 (454)
. . .. ..++.+.++|++++||+|...... .+++.++..|+-|.
T Consensus 91 ~-------~-~~-~~~~~~~~~d~vi~GHtH~~~~~~--------~~~~~~inpGs~~~ 132 (155)
T cd00841 91 G-------L-DR-LYLAKEGGADVVLYGHTHIPVIEK--------IGGVLLLNPGSLSL 132 (155)
T ss_pred c-------h-hh-hhhhhhcCCCEEEECcccCCccEE--------ECCEEEEeCCCccC
Confidence 1 1 11 445677889999999999854332 24677887777654
|
YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph |
| >TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.8e-09 Score=99.76 Aligned_cols=69 Identities=20% Similarity=0.218 Sum_probs=47.5
Q ss_pred EEEecCCCCCCh----HHHHHHhhc--CCCCeEeecCccccCC----CChhhHHHHhhhhhhhhcC-CCeeecCCCcccC
Q 012895 151 AIVGDLGQTEWT----NSTLDHVGS--KDYDVFLLPGDLSYAD----FQQPLWDSFGRLVEPYASS-RPWMVTEGNHEIE 219 (454)
Q Consensus 151 ~~igD~~~~~~~----~~~l~~i~~--~~pd~vl~~GDl~y~~----~~~~~~~~~~~~~~~l~~~-~P~~~v~GNHD~~ 219 (454)
+++||+|.+... +..++.+.+ .+||+|+++||+++.- ......+.+.+.++.+... .|+++++||||..
T Consensus 2 ~~iSDlHl~~~~~~~~~~~l~~l~~~~~~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~~~~v~~v~GNHD~~ 81 (231)
T TIGR01854 2 LFISDLHLSPERPDITALFLDFLREEARKADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQGVPCYFMHGNRDFL 81 (231)
T ss_pred eEEEecCCCCCChhHHHHHHHHHHhhhccCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHCCCeEEEEcCCCchh
Confidence 689999987542 345555543 3899999999999731 1222234455566666653 8999999999983
|
This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown. |
| >cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.7e-08 Score=90.37 Aligned_cols=166 Identities=16% Similarity=0.205 Sum_probs=95.8
Q ss_pred EEEEEecCCCCCChH----HHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCCC
Q 012895 149 EFAIVGDLGQTEWTN----STLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPII 224 (454)
Q Consensus 149 ~f~~igD~~~~~~~~----~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~ 224 (454)
+++++||+|...... .+++.++..++|.|+++||+++ ... .+.++.+ ..|++.|.||||..
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~~~~d~iih~GDi~~----~~~----~~~l~~~--~~~~~~V~GN~D~~----- 65 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVPGKIQHVLCTGNLCS----KET----YDYLKTI--APDVHIVRGDFDEN----- 65 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhccCCCCEEEECCCCCC----HHH----HHHHHhh--CCceEEEECCCCcc-----
Confidence 478999999543321 3444454578999999999975 111 2223333 24799999999972
Q ss_pred CcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEEEEEcccccc
Q 012895 225 LPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYN 304 (454)
Q Consensus 225 ~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~ 304 (454)
+.+|. ...+++++ ++|.++|--.+.
T Consensus 66 -----------~~lp~---------~~~~~~~g-----------------------------------~~i~l~HG~~~~ 90 (178)
T cd07394 66 -----------LNYPE---------TKVITVGQ-----------------------------------FKIGLIHGHQVV 90 (178)
T ss_pred -----------ccCCC---------cEEEEECC-----------------------------------EEEEEEECCcCC
Confidence 02232 11222222 256666642221
Q ss_pred CCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCCcCCCCcEEEEECCCCCCCCcccccCCCCCCCcee
Q 012895 305 TNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSPLSMF 384 (454)
Q Consensus 305 ~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~ 384 (454)
.. . ..+.+..++++.++|++++||+|...... .+|.+++..|+-|.+.+. .. .
T Consensus 91 ~~-----~---~~~~~~~~~~~~~~dvii~GHTH~p~~~~--------~~g~~viNPGSv~~~~~~---~~-~------- 143 (178)
T cd07394 91 PW-----G---DPDSLAALQRQLDVDILISGHTHKFEAFE--------HEGKFFINPGSATGAFSP---LD-P------- 143 (178)
T ss_pred CC-----C---CHHHHHHHHHhcCCCEEEECCCCcceEEE--------ECCEEEEECCCCCCCCCC---CC-C-------
Confidence 11 0 12345556677889999999999854433 147778888876543110 00 0
Q ss_pred eecccCEEEEEEecCCeEEEEEEEecCCC
Q 012895 385 QESSFGHARLKILDETRAHWSWYRNNDSD 413 (454)
Q Consensus 385 ~~~~~G~~~l~v~~~~~~~~~~~~~~dg~ 413 (454)
.....|..|++. .....+++++..+++
T Consensus 144 -~~~~syail~~~-~~~~~~~~~~l~~~~ 170 (178)
T cd07394 144 -NVIPSFVLMDIQ-GSKVVTYVYQLIDGE 170 (178)
T ss_pred -CCCCeEEEEEec-CCeEEEEEEEEECCc
Confidence 011256777764 346777888775554
|
Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl |
| >PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.1e-09 Score=98.08 Aligned_cols=174 Identities=16% Similarity=0.197 Sum_probs=88.8
Q ss_pred CeEEEEEecCCCCCC-hHHHHHHhhcCCCCeEeecCccccCCCChhhHH--------------------------HHhhh
Q 012895 147 PIEFAIVGDLGQTEW-TNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWD--------------------------SFGRL 199 (454)
Q Consensus 147 ~~~f~~igD~~~~~~-~~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~--------------------------~~~~~ 199 (454)
+-+++.++|.+.... ..+++..+...+||+|+++||+.-......+|. .|++.
T Consensus 5 ~~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~~ 84 (255)
T PF14582_consen 5 VRKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFRI 84 (255)
T ss_dssp --EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHHH
T ss_pred chhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHHH
Confidence 347899999875432 234556666789999999999987655555555 44444
Q ss_pred hhhhhcCCCeeecCCCcccCCCCCCCcchhhhhhhhcc----CCCCCCCCCCCceEEEEeCeEEEEEecccC-CCC--C-
Q 012895 200 VEPYASSRPWMVTEGNHEIESIPIILPHAFKAYNARWL----MPYEESGSSSNLYYSFDIAGAHIIMLGSYT-DFD--E- 271 (454)
Q Consensus 200 ~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~----~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~-~~~--~- 271 (454)
+..+ .+|++++|||||... ...+++-+. .|.-. . -...+.+.-|...|+++.... +.. .
T Consensus 85 L~~~--~~p~~~vPG~~Dap~--------~~~lr~a~~~e~v~p~~~-~--vH~sf~~~~g~y~v~G~GGeI~~~~~~~~ 151 (255)
T PF14582_consen 85 LGEL--GVPVFVVPGNMDAPE--------RFFLREAYNAEIVTPHIH-N--VHESFFFWKGEYLVAGMGGEITDDQREEE 151 (255)
T ss_dssp HHCC---SEEEEE--TTS-SH--------HHHHHHHHHCCCC-TTEE-E---CTCEEEETTTEEEEEE-SEEESSS-BCS
T ss_pred HHhc--CCcEEEecCCCCchH--------HHHHHHHhccceecccee-e--eeeeecccCCcEEEEecCccccCCCcccc
Confidence 4443 399999999999831 111222221 12100 0 011122333447777775421 110 0
Q ss_pred -----CHHHHHHHHHHHHhhccCCCCeEEEEEcccc-ccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccce
Q 012895 272 -----DSAQYKWLKADLAKINRKKTPWIFVLLHAPW-YNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYE 341 (454)
Q Consensus 272 -----~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~-~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~ 341 (454)
.....+|..+.|...+ ..-+|++.|.|+ +..+..+ ...+.+..++++++.++++|||+|.-.
T Consensus 152 ~~LrYP~weaey~lk~l~elk---~~r~IlLfhtpPd~~kg~~h-----~GS~~V~dlIk~~~P~ivl~Ghihe~~ 219 (255)
T PF14582_consen 152 FKLRYPAWEAEYSLKFLRELK---DYRKILLFHTPPDLHKGLIH-----VGSAAVRDLIKTYNPDIVLCGHIHESH 219 (255)
T ss_dssp SS-EEEHHHHHHHHGGGGGCT---SSEEEEEESS-BTBCTCTBT-----TSBHHHHHHHHHH--SEEEE-SSS-EE
T ss_pred ccccchHHHHHHHHHHHHhcc---cccEEEEEecCCccCCCccc-----ccHHHHHHHHHhcCCcEEEecccccch
Confidence 1223344445555543 223788899999 3332222 234688899999999999999999754
|
|
| >TIGR00583 mre11 DNA repair protein (mre11) | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.1e-08 Score=102.49 Aligned_cols=243 Identities=14% Similarity=0.090 Sum_probs=120.7
Q ss_pred CCeEEEEEecCCCCCCh-------------HHHHHHhhcCCCCeEeecCccccCCCCh-hhHHHHhhhhhh---------
Q 012895 146 FPIEFAIVGDLGQTEWT-------------NSTLDHVGSKDYDVFLLPGDLSYADFQQ-PLWDSFGRLVEP--------- 202 (454)
Q Consensus 146 ~~~~f~~igD~~~~~~~-------------~~~l~~i~~~~pd~vl~~GDl~y~~~~~-~~~~~~~~~~~~--------- 202 (454)
+.+||++++|+|.+... .++++.+.+.++|+||++||+.+...+. .....+.+.+++
T Consensus 2 ~~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~~p~~ 81 (405)
T TIGR00583 2 DTIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLRSLRLYCLGDKPCE 81 (405)
T ss_pred CceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHhhccCCccc
Confidence 56999999999986321 2344455688999999999999876542 111222223322
Q ss_pred ------------------h-------hcCCCeeecCCCcccCCCCCCCcchhhhhhh------hccCCCCCCCCCCCc--
Q 012895 203 ------------------Y-------ASSRPWMVTEGNHEIESIPIILPHAFKAYNA------RWLMPYEESGSSSNL-- 249 (454)
Q Consensus 203 ------------------l-------~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~------~~~~p~~~~~~~~~~-- 249 (454)
+ ...+|+|++.||||....... ........ .|.... . ....
T Consensus 82 ~~~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p~~~~~--~~~l~lL~~~Glvnifgk~~---~-~~~i~~ 155 (405)
T TIGR00583 82 LEFLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDPSGDGL--LCALDLLHATGLVNYFGKVP---E-IDNIIV 155 (405)
T ss_pred hhhccchhhhcccccccccccccccccCCCCEEEEcCCCCCcccccc--ccHHHHHHhCCCEEEecccc---c-ccccee
Confidence 0 125899999999998532110 00001111 111000 0 0000
Q ss_pred -eEEEEeCe--EEEEEecccCCCCCCHHHH--HHHHHHHHhhcc---CCCCeEEEEEccccccCCCCCCCCcHHHHHHHH
Q 012895 250 -YYSFDIAG--AHIIMLGSYTDFDEDSAQY--KWLKADLAKINR---KKTPWIFVLLHAPWYNTNTAHQGEGESMRNSME 321 (454)
Q Consensus 250 -~ys~~~g~--v~fi~Lds~~~~~~~~~Q~--~WL~~~L~~~~~---~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~ 321 (454)
.-.+.-|+ +.+.+|.... .+.+ .|-+..+..... ....+.|++.|......... .. ..+
T Consensus 156 ~Pvll~kg~~~valyGl~~~~-----d~rl~~~f~~~~v~~~~p~~~~~~~fnIlv~Hq~~~~~~~~-----~~---ipe 222 (405)
T TIGR00583 156 SPILLQKGETKLALYGISNVR-----DERLVRTFKDNKVSFLRPNAGAEDWFNLLVLHQNHAAHTST-----SF---LPE 222 (405)
T ss_pred eeEEEecCCeeEEEecCCCCC-----HHHHHHHhhccchhhhccccCCCCceEEEEeCceecCCCCc-----cc---Cch
Confidence 01112222 4445544221 1111 121111111111 12235899999886322111 00 112
Q ss_pred HHHHhcCCcEEEecccccceeeecccCCCcCCCCcEEEEECCCCCCCCcccccCCCCCCCceeeecccCEEEEEEecCCe
Q 012895 322 ELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQESSFGHARLKILDETR 401 (454)
Q Consensus 322 ~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~ 401 (454)
.++ ..++|+|+.||.|..+.. +.. .+....+|. -+ |+..+ ..+... ....-|+..|+|. +..
T Consensus 223 ~ll-p~~fDYValGHiH~~~~~-p~~----~~~~~~~V~-yp-GS~v~--tSf~e~-------E~~~Kgv~lVeI~-~~~ 284 (405)
T TIGR00583 223 SFI-PDFFDLVIWGHEHECLPD-PVY----NPSDGFYVL-QP-GSTVA--TSLTPG-------EALPKHVFILNIK-GRK 284 (405)
T ss_pred hhh-hccCcEEEeccccccccc-ccc----cCCCCceEE-EC-CCccc--cccccc-------ccCCCEEEEEEEc-CCe
Confidence 333 346999999999985432 111 111222332 22 22221 122210 0122377888885 457
Q ss_pred EEEEEEEecCCCceeeeEEEEEEc
Q 012895 402 AHWSWYRNNDSDAVIADEVRLESL 425 (454)
Q Consensus 402 ~~~~~~~~~dg~~~~~D~~~i~~~ 425 (454)
..++++....-...+..++.+...
T Consensus 285 ~~~~~IpL~~vRpf~~~~i~l~~~ 308 (405)
T TIGR00583 285 FASKPIPLQTVRPFVMKEILLDKV 308 (405)
T ss_pred eEEEEeeCCCcccEEEEEEEhhhc
Confidence 888999987777777888877765
|
All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria. |
| >TIGR00040 yfcE phosphoesterase, MJ0936 family | Back alignment and domain information |
|---|
Probab=98.98 E-value=5.2e-09 Score=91.98 Aligned_cols=61 Identities=13% Similarity=0.210 Sum_probs=42.3
Q ss_pred eEEEEEecCCCCCCh-HHHHHHhhcC-CCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCccc
Q 012895 148 IEFAIVGDLGQTEWT-NSTLDHVGSK-DYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEI 218 (454)
Q Consensus 148 ~~f~~igD~~~~~~~-~~~l~~i~~~-~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 218 (454)
+|++++||+|..... +..++.++.. ++|.|+++||++. . ...+.++.+ ..|++++.||||.
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~----~----~~~~~l~~~--~~~~~~V~GN~D~ 63 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLTS----P----FVLKEFEDL--AAKVIAVRGNNDG 63 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCCC----H----HHHHHHHHh--CCceEEEccCCCc
Confidence 589999999975433 3344555555 8999999999972 1 122233322 3589999999997
|
Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required. |
| >cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.98 E-value=7.7e-09 Score=98.20 Aligned_cols=175 Identities=15% Similarity=0.097 Sum_probs=92.8
Q ss_pred eEEEEEecCCCCC------Ch----HHHHHHhhcCCCC-eEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCc
Q 012895 148 IEFAIVGDLGQTE------WT----NSTLDHVGSKDYD-VFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNH 216 (454)
Q Consensus 148 ~~f~~igD~~~~~------~~----~~~l~~i~~~~pd-~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNH 216 (454)
++|++++|+|... .. ...++++++.+|| +++.+||++....... +......++.+...-.-++++|||
T Consensus 1 l~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~-~~~~~~~~~~l~~~g~d~~~~GNH 79 (252)
T cd00845 1 LTILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPST-ATKGEANIELMNALGYDAVTIGNH 79 (252)
T ss_pred CEEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchh-ccCCcHHHHHHHhcCCCEEeeccc
Confidence 5899999999543 11 3566777777888 7789999987654421 212222333333333556788999
Q ss_pred ccCCCCCCCcchhhhhhhhccCCCCC---------C-CCCCCceEEEEeCeEE--EEEecccCCCC----------CCHH
Q 012895 217 EIESIPIILPHAFKAYNARWLMPYEE---------S-GSSSNLYYSFDIAGAH--IIMLGSYTDFD----------EDSA 274 (454)
Q Consensus 217 D~~~~~~~~~~~~~~~~~~~~~p~~~---------~-~~~~~~~ys~~~g~v~--fi~Lds~~~~~----------~~~~ 274 (454)
|+..... .+....+....|.-. . ......|..++.++++ |+++.+..... ....
T Consensus 80 e~d~g~~----~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~~~i~~~~g~kIgiiG~~~~~~~~~~~~~~~~~~~~~~ 155 (252)
T cd00845 80 EFDYGLD----ALAELYKDANFPVLSANLYDKDTGTGPPWAKPYKIIEVDGVKIGVIGLTTPDTPTYTPLGWIIGLPFED 155 (252)
T ss_pred cccccHH----HHHHHHHhCCCCEEEEeeeccCCCCCCCCcCCeEEEEECCEEEEEEEeccccceeecCCCcccCceecC
Confidence 9854321 233222222222100 0 0011235567778754 55554321100 0011
Q ss_pred HHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeccccccee
Q 012895 275 QYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYER 342 (454)
Q Consensus 275 Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r 342 (454)
..+.+++..++. +++...+|++.|.|... ...+.+.+ .++|++|+||.|....
T Consensus 156 ~~~~~~~~~~~~-~~~~D~vIvl~H~g~~~------------~~~la~~~--~giDlvlggH~H~~~~ 208 (252)
T cd00845 156 LAEAVAVAEELL-AEGADVIILLSHLGLDD------------DEELAEEV--PGIDVILGGHTHHLLE 208 (252)
T ss_pred HHHHHHHHHHHH-hCCCCEEEEEeccCccc------------hHHHHhcC--CCccEEEcCCcCcccC
Confidence 223343322222 23667899999987532 11222222 5899999999998653
|
This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich |
| >PRK09453 phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.9e-08 Score=89.39 Aligned_cols=69 Identities=14% Similarity=0.225 Sum_probs=45.9
Q ss_pred eEEEEEecCCCCCCh-HHHHHHhhcCCCCeEeecCccccCCCCh---h--hHHHHhhhhhhhhcCCCeeecCCCccc
Q 012895 148 IEFAIVGDLGQTEWT-NSTLDHVGSKDYDVFLLPGDLSYADFQQ---P--LWDSFGRLVEPYASSRPWMVTEGNHEI 218 (454)
Q Consensus 148 ~~f~~igD~~~~~~~-~~~l~~i~~~~pd~vl~~GDl~y~~~~~---~--~~~~~~~~~~~l~~~~P~~~v~GNHD~ 218 (454)
+|++++||+|..... +++++.+++.++|.|+++||+++.+... . ..+...+.++.+ ..+++++.||||.
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~--~~~v~~V~GNhD~ 75 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY--ADKIIAVRGNCDS 75 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhc--CCceEEEccCCcc
Confidence 589999999965322 3455666678999999999998643210 0 112223333322 2589999999997
|
|
| >cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.95 E-value=3.3e-09 Score=89.80 Aligned_cols=103 Identities=17% Similarity=0.213 Sum_probs=68.6
Q ss_pred EEEecCCCCCChHHHHHHh--hcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCCCCcch
Q 012895 151 AIVGDLGQTEWTNSTLDHV--GSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPIILPHA 228 (454)
Q Consensus 151 ~~igD~~~~~~~~~~l~~i--~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~ 228 (454)
+++||+|.. ...+..+ ...++|+++++||+.. ... +.++.+ ...|++++.||||
T Consensus 1 ~viSDtH~~---~~~~~~~~~~~~~~d~ii~~GD~~~-----~~~----~~~~~~-~~~~~~~V~GN~D----------- 56 (129)
T cd07403 1 LVISDTESP---ALYSPEIKVRLEGVDLILSAGDLPK-----EYL----EYLVTM-LNVPVYYVHGNHD----------- 56 (129)
T ss_pred CeeccccCc---cccchHHHhhCCCCCEEEECCCCCh-----HHH----HHHHHH-cCCCEEEEeCCCc-----------
Confidence 479999944 2233333 2578999999999842 111 222222 2468999999999
Q ss_pred hhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCC
Q 012895 229 FKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTA 308 (454)
Q Consensus 229 ~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~ 308 (454)
.+|+++|+|++.....
T Consensus 57 ----------------------------------------------------------------~~Ilv~H~pp~~~~~~ 72 (129)
T cd07403 57 ----------------------------------------------------------------VDILLTHAPPAGIGDG 72 (129)
T ss_pred ----------------------------------------------------------------cCEEEECCCCCcCcCc
Confidence 2588899988654321
Q ss_pred CCCCcHHHHHHHHHHHHhcCCcEEEeccccccee
Q 012895 309 HQGEGESMRNSMEELLYNARVDVVFAGHVHAYER 342 (454)
Q Consensus 309 ~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r 342 (454)
.. ......+.+.+++.+++++++|+||+|....
T Consensus 73 ~~-~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~ 105 (129)
T cd07403 73 ED-FAHRGFEAFLDFIDRFRPKLFIHGHTHLNYG 105 (129)
T ss_pred cc-ccccCHHHHHHHHHHHCCcEEEEcCcCCCcC
Confidence 11 1112356778888999999999999997444
|
TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.86 E-value=8.3e-09 Score=92.34 Aligned_cols=57 Identities=16% Similarity=0.256 Sum_probs=35.3
Q ss_pred HHHHHhh-cCCCCeEeecCccccCCCC-hhhHHH-Hhhhhhhhh-------------------cCCCeeecCCCcccCC
Q 012895 164 STLDHVG-SKDYDVFLLPGDLSYADFQ-QPLWDS-FGRLVEPYA-------------------SSRPWMVTEGNHEIES 220 (454)
Q Consensus 164 ~~l~~i~-~~~pd~vl~~GDl~y~~~~-~~~~~~-~~~~~~~l~-------------------~~~P~~~v~GNHD~~~ 220 (454)
.+++.+. ..+||.|+++||+++..-. +.+|.. +.++.+.+. ..+|++.++||||+..
T Consensus 34 ~~~~~~~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~V~GNHDIG~ 112 (193)
T cd08164 34 HIVSMMQFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLINIAGNHDVGY 112 (193)
T ss_pred HHHHHHHHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEEECCcccCCC
Confidence 3444443 6799999999999965311 334422 222222221 1388999999999954
|
Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the |
| >PHA02546 47 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=2.4e-07 Score=91.77 Aligned_cols=72 Identities=11% Similarity=0.153 Sum_probs=48.3
Q ss_pred eEEEEEecCCCCCCh-------------HHHHHHhhcCCCCeEeecCccccCCCC-h-hhHHHHhh-hhhhhhc-CCCee
Q 012895 148 IEFAIVGDLGQTEWT-------------NSTLDHVGSKDYDVFLLPGDLSYADFQ-Q-PLWDSFGR-LVEPYAS-SRPWM 210 (454)
Q Consensus 148 ~~f~~igD~~~~~~~-------------~~~l~~i~~~~pd~vl~~GDl~y~~~~-~-~~~~~~~~-~~~~l~~-~~P~~ 210 (454)
+||+++||+|.+... .++++.+.+.+||+||++||+++.... . .......+ +++.+.. .+|++
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~v~ 80 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGITLH 80 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCeEE
Confidence 689999999986432 123444458899999999999976422 1 22222222 2444433 58999
Q ss_pred ecCCCcccC
Q 012895 211 VTEGNHEIE 219 (454)
Q Consensus 211 ~v~GNHD~~ 219 (454)
+++||||..
T Consensus 81 ~I~GNHD~~ 89 (340)
T PHA02546 81 VLVGNHDMY 89 (340)
T ss_pred EEccCCCcc
Confidence 999999984
|
|
| >cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.85 E-value=5e-08 Score=92.80 Aligned_cols=175 Identities=14% Similarity=0.148 Sum_probs=91.6
Q ss_pred eEEEEEecCCCCCC-----------hHHHHHHhhcCCCC-eEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCC
Q 012895 148 IEFAIVGDLGQTEW-----------TNSTLDHVGSKDYD-VFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGN 215 (454)
Q Consensus 148 ~~f~~igD~~~~~~-----------~~~~l~~i~~~~pd-~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GN 215 (454)
+++++++|+|.-.. ....++++++.+++ ++|.+||++...... .+..-...++.+..--.-+.++||
T Consensus 1 ~~il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~-~~~~g~~~~~~l~~l~~d~~~~GN 79 (257)
T cd07406 1 FTILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLS-TATKGKQMVPVLNALGVDLACFGN 79 (257)
T ss_pred CeEEEEccceeecccCCCCcCCHHHHHHHHHHHHhcCCCEEEEECCCccCCccch-hhcCCccHHHHHHhcCCcEEeecc
Confidence 57889999873111 12456666667788 899999998654321 111111222222222234668999
Q ss_pred cccCCCCCCCcchhhhhhhhccCCCCC------CC-C---CCCceEEEEeCeEE--EEEecccCCC------CC---CHH
Q 012895 216 HEIESIPIILPHAFKAYNARWLMPYEE------SG-S---SSNLYYSFDIAGAH--IIMLGSYTDF------DE---DSA 274 (454)
Q Consensus 216 HD~~~~~~~~~~~~~~~~~~~~~p~~~------~~-~---~~~~~ys~~~g~v~--fi~Lds~~~~------~~---~~~ 274 (454)
||+..... .+.........|.-. .+ . .-..|.-++.++++ |+++.+.... .. ...
T Consensus 80 Hefd~g~~----~l~~~~~~~~~~~L~aNi~~~~~~~~~~~~~~~~i~~~~g~kIgviG~~~~~~~~~~~~~~~~~~~~d 155 (257)
T cd07406 80 HEFDFGED----QLQKRLGESKFPWLSSNVFDATGGGPLPNGKESAIIERAGVKIGLLGLVEEEWLETLTIDPEYVRYRD 155 (257)
T ss_pred cccccCHH----HHHHHHhhCCCCEEEEEEEECCCCcccCCCCCeEEEEECCeEEEEEEEecccccccccCCCCcceEcC
Confidence 99954321 222222222222110 00 0 12457778888855 5555432110 00 122
Q ss_pred HHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccce
Q 012895 275 QYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYE 341 (454)
Q Consensus 275 Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~ 341 (454)
-.+.+++.+++..+++.+.+|++.|.+... . ..+.+.+ .++|++|+||.|..+
T Consensus 156 ~~~~~~~~v~~~~~~~~D~iVvl~H~g~~~--------d----~~la~~~--~~iD~IlgGH~H~~~ 208 (257)
T cd07406 156 YVETARELVDELREQGADLIIALTHMRLPN--------D----KRLAREV--PEIDLILGGHDHEYI 208 (257)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEeccCchh--------h----HHHHHhC--CCCceEEecccceeE
Confidence 234444444333334678899999987421 0 1222222 479999999999865
|
CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th |
| >cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.2e-07 Score=91.37 Aligned_cols=182 Identities=15% Similarity=0.124 Sum_probs=93.1
Q ss_pred eEEEEEecCCCCCC-----------------hHHHHHHhhcCCCCeEee-cCccccCCCChhhHH------HHhhhhhhh
Q 012895 148 IEFAIVGDLGQTEW-----------------TNSTLDHVGSKDYDVFLL-PGDLSYADFQQPLWD------SFGRLVEPY 203 (454)
Q Consensus 148 ~~f~~igD~~~~~~-----------------~~~~l~~i~~~~pd~vl~-~GDl~y~~~~~~~~~------~~~~~~~~l 203 (454)
++|++++|+|..-. ....++++++.+|+.+++ +||++..... ..+. .....++.+
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~-~~~~~~~~~~~~~~~~~~l 79 (277)
T cd07410 1 LRILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPL-ADYYAKIEDGDPHPMIAAM 79 (277)
T ss_pred CeEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHH-HHHhhhcccCCCChHHHHH
Confidence 57899999985421 123556666778888877 9999875432 1111 001122222
Q ss_pred hcCCCeeecCCCcccCCCCCCCcchhhhhhhhccCCCC-------CCC-CCCCceEEEEeC-eEEE--EEecccCC--C-
Q 012895 204 ASSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYE-------ESG-SSSNLYYSFDIA-GAHI--IMLGSYTD--F- 269 (454)
Q Consensus 204 ~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~-------~~~-~~~~~~ys~~~g-~v~f--i~Lds~~~--~- 269 (454)
..--.-+.++||||+..... .+....+....|.- ..+ .....|.-++.+ ++++ |++-+... +
T Consensus 80 n~~g~d~~~lGNHe~d~g~~----~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~i~~~~~g~kVgviG~~~~~~~~~~ 155 (277)
T cd07410 80 NALGYDAGTLGNHEFNYGLD----YLDKVIKQANFPVLSANVIDADTGEPFLKPYVILERDVGVKVGIIGLTTPQIPNWE 155 (277)
T ss_pred HhcCCCEEeecccCcccCHH----HHHHHHHhCCCCEEEEEEEeCCCCCcccCCEEEEEecCCCEEEEEecCCccccccc
Confidence 22233466889999854321 22222222222211 001 112345667888 8554 44433210 0
Q ss_pred ----------CCCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHh-cCCcEEEecccc
Q 012895 270 ----------DEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYN-ARVDVVFAGHVH 338 (454)
Q Consensus 270 ----------~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~-~~v~lvl~GH~H 338 (454)
....+..++..++|++ ++.+.+|+++|.+........ .. .+.....+.++ .++|++|+||.|
T Consensus 156 ~~~~~~~~~~~d~~~~~~~~v~~lr~---~~~D~IIvl~H~g~~~~~~~~-~~---~~~~~~~la~~~~~vD~IlgGHsH 228 (277)
T cd07410 156 KPNLIGGLKFTDPVETAKKYVPKLRA---EGADVVVVLAHGGFERDLEES-LT---GENAAYELAEEVPGIDAILTGHQH 228 (277)
T ss_pred CcccCCCcEEcCHHHHHHHHHHHHHH---cCCCEEEEEecCCcCCCcccc-cC---CccHHHHHHhcCCCCcEEEeCCCc
Confidence 0011223444444443 356789999998764322100 01 11222334444 589999999999
Q ss_pred cce
Q 012895 339 AYE 341 (454)
Q Consensus 339 ~y~ 341 (454)
...
T Consensus 229 ~~~ 231 (277)
T cd07410 229 RRF 231 (277)
T ss_pred ccc
Confidence 744
|
CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos |
| >cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.81 E-value=2.5e-08 Score=92.35 Aligned_cols=188 Identities=18% Similarity=0.208 Sum_probs=93.7
Q ss_pred EEEecCCCCCChH---HHHHHhh-c---CCCCeEeecCccccCCC--C---hhhHHH-HhhhhhhhhcCCCeeecCCCcc
Q 012895 151 AIVGDLGQTEWTN---STLDHVG-S---KDYDVFLLPGDLSYADF--Q---QPLWDS-FGRLVEPYASSRPWMVTEGNHE 217 (454)
Q Consensus 151 ~~igD~~~~~~~~---~~l~~i~-~---~~pd~vl~~GDl~y~~~--~---~~~~~~-~~~~~~~l~~~~P~~~v~GNHD 217 (454)
+++||+|.+.... .....+. . .++|.++++||+++.-. . ...... +..+++.+....++++++||||
T Consensus 1 ~~iSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~v~GNHD 80 (217)
T cd07398 1 LFISDLHLGDGGPAADFLLLFLLAALALGEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLADRGTRVYYVPGNHD 80 (217)
T ss_pred CEeeeecCCCCCCCHHHHHHHHHhhhccCCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHHHCCCeEEEECCCch
Confidence 4799999875432 2223322 2 59999999999996311 1 111112 2344444455689999999999
Q ss_pred cCCCCCCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEEEE
Q 012895 218 IESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVL 297 (454)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~ 297 (454)
..... .+........ .......+.+++.+++++-... +........|+...+..... .+.++.
T Consensus 81 ~~~~~--------~~~~~~~~~~-----~~~~~~~~~~~g~~~~~~HG~~-~d~~~~~~~~~~~~~~~~~~---~~~~~~ 143 (217)
T cd07398 81 FLLGD--------FFAEELGLIL-----LPDPLVHLELDGKRILLEHGDQ-FDTDDRAYQLLRRLGRNPYD---QLLFLN 143 (217)
T ss_pred HHHHh--------HHHHHcCCEE-----eccceEEEeeCCeEEEEECCCc-CchhHHHHHHHHHHhCcHHH---HHHHhc
Confidence 84211 1111111110 0011215677888888875432 22223333444433211100 000000
Q ss_pred Eccc---------ccc-----CCCCC-CCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCCcCCCCcEEEEEC
Q 012895 298 LHAP---------WYN-----TNTAH-QGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIG 362 (454)
Q Consensus 298 ~H~P---------~~~-----~~~~~-~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G 362 (454)
.+.. ... ..... ........+.+.+++.+++++++++||+|....... .+..|+++|
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~~~--------~~~~~~n~G 215 (217)
T cd07398 144 RPLNRRRGIAGGLRWSSRYLKKKVKKAVAIIDVFEEAVARLARRKGVDGVICGHTHRPALHEL--------DGKLYINLG 215 (217)
T ss_pred chHHHHHHHHHhhhhhhHHHHhCccchHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCCeEEE--------CCEEEEECC
Confidence 0000 000 00000 001113455666777889999999999998654431 366777776
Q ss_pred C
Q 012895 363 D 363 (454)
Q Consensus 363 ~ 363 (454)
+
T Consensus 216 ~ 216 (217)
T cd07398 216 D 216 (217)
T ss_pred C
Confidence 4
|
YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l |
| >COG1768 Predicted phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.7e-07 Score=80.58 Aligned_cols=162 Identities=22% Similarity=0.298 Sum_probs=86.3
Q ss_pred CCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCCCCcchhhhhhhhccCCCCCCCCCCCceE-
Q 012895 173 DYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYY- 251 (454)
Q Consensus 173 ~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~y- 251 (454)
.-|.|++.||+..+-..++.- .=++++..|. -.-+.+.||||+... . .....+. +|. ..+|
T Consensus 43 ~eDiVllpGDiSWaM~l~ea~-~Dl~~i~~LP--G~K~m~rGNHDYWw~-s-----~skl~n~--lp~-------~l~~~ 104 (230)
T COG1768 43 PEDIVLLPGDISWAMRLEEAE-EDLRFIGDLP--GTKYMIRGNHDYWWS-S-----ISKLNNA--LPP-------ILFYL 104 (230)
T ss_pred hhhEEEecccchhheechhhh-hhhhhhhcCC--CcEEEEecCCccccc-h-----HHHHHhh--cCc-------hHhhh
Confidence 458899999998754432211 1123444433 224679999999632 1 1111111 121 1111
Q ss_pred --EEEeCeEEEEEeccc----CCCCCCHHH--------HHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHH
Q 012895 252 --SFDIAGAHIIMLGSY----TDFDEDSAQ--------YKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMR 317 (454)
Q Consensus 252 --s~~~g~v~fi~Lds~----~~~~~~~~Q--------~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~ 317 (454)
.|.++++.+++.-.. .++....+| ..-|+..+.++-++...-.|||.|.|+++.....
T Consensus 105 n~~f~l~n~aI~G~RgW~s~~~~~e~~te~Deki~~RE~~RLrlsa~a~l~k~~~~fivM~HYPP~s~~~t~-------- 176 (230)
T COG1768 105 NNGFELLNYAIVGVRGWDSPSFDSEPLTEQDEKIFLREIGRLRLSADAALPKGVSKFIVMTHYPPFSDDGTP-------- 176 (230)
T ss_pred ccceeEeeEEEEEeecccCCCCCcCccchhHHHHHHHHHHHHHHHHHHhcccCcCeEEEEEecCCCCCCCCC--------
Confidence 244555555544221 112112222 2233332222222244458999999998764321
Q ss_pred HHHHHHHHhcCCcEEEecccccceeeecccCCCcCCCCcEEEEECC
Q 012895 318 NSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGD 363 (454)
Q Consensus 318 ~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G~ 363 (454)
..+.+++++++|+.++.||.|.-.|-.+-. .+-.|+-|+.+.+
T Consensus 177 ~~~sevlee~rv~~~lyGHlHgv~~p~~~~---s~v~Gi~y~Lvaa 219 (230)
T COG1768 177 GPFSEVLEEGRVSKCLYGHLHGVPRPNIGF---SNVRGIEYMLVAA 219 (230)
T ss_pred cchHHHHhhcceeeEEeeeccCCCCCCCCc---ccccCceEEEEec
Confidence 356778889999999999999877644311 1234677765543
|
|
| >cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.76 E-value=2.9e-07 Score=87.19 Aligned_cols=178 Identities=17% Similarity=0.217 Sum_probs=97.2
Q ss_pred EEEEecCCCCCChHHHHH---Hhh---cCCCCeEeecCccccCCCCh-----------hhHHHHhhhhhhhh-cCCCeee
Q 012895 150 FAIVGDLGQTEWTNSTLD---HVG---SKDYDVFLLPGDLSYADFQQ-----------PLWDSFGRLVEPYA-SSRPWMV 211 (454)
Q Consensus 150 f~~igD~~~~~~~~~~l~---~i~---~~~pd~vl~~GDl~y~~~~~-----------~~~~~~~~~~~~l~-~~~P~~~ 211 (454)
|++.||+|.. ...+++ .++ ..++|++|++||+....... ..+..|.+.+.... ..+|+++
T Consensus 1 i~v~Gd~HG~--~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~f 78 (262)
T cd00844 1 IAVEGCCHGE--LDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIF 78 (262)
T ss_pred CEEEecCCcc--HHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEE
Confidence 5789999974 333433 332 35799999999995322111 12223333333322 2477899
Q ss_pred cCCCcccCCCCCCCcchhhhhhhhccCCCCCCCCCCCceE-----EEEeCeEEEEEecccC---CCC--------CCHHH
Q 012895 212 TEGNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYY-----SFDIAGAHIIMLGSYT---DFD--------EDSAQ 275 (454)
Q Consensus 212 v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~y-----s~~~g~v~fi~Lds~~---~~~--------~~~~Q 275 (454)
+.||||... .+ .+ ++... ....+.+| .+++++++|..|.... ++. ..+.+
T Consensus 79 i~GNHE~~~-------~l---~~---l~~gg-~v~~Ni~~Lg~~~v~~~~GlrIaGLsG~~~~~~~~~~~~~~~~~t~~~ 144 (262)
T cd00844 79 IGGNHEASN-------YL---WE---LPYGG-WVAPNIYYLGYAGVVNFGGLRIAGLSGIYKSHDYRKGHFERPPYSEDT 144 (262)
T ss_pred ECCCCCCHH-------HH---Hh---hcCCC-eecCcEEEecCCCEEEECCeEEEEecccccccccccccccCCCCCHHH
Confidence 999999621 11 11 11100 00112332 3567889999997521 111 12333
Q ss_pred HHHHH-------HHHHhhccCCCCeEEEEEccccccCCCCCCCC---------------cHHHHHHHHHHHHhcCCcEEE
Q 012895 276 YKWLK-------ADLAKINRKKTPWIFVLLHAPWYNTNTAHQGE---------------GESMRNSMEELLYNARVDVVF 333 (454)
Q Consensus 276 ~~WL~-------~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~---------------~~~~~~~l~~ll~~~~v~lvl 333 (454)
+..+. ..|..... .. -|+++|.|+.......... .......+..++++.++.+.|
T Consensus 145 ~rs~y~~r~~~~~kl~~~~~-~v--DIlLSHdWP~gI~~~~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~ll~~lkPryhf 221 (262)
T cd00844 145 KRSAYHVRNIEVFKLKQLKQ-PI--DIFLSHDWPRGIYKHGDKKQLLRKKPFFRQDIESGTLGSPAAEELLKHLKPRYWF 221 (262)
T ss_pred HHHhhhhhHHHHHHHHhcCC-CC--cEEEeCCCCcchhhccchHHhhhcCccchhcccccCCCCHHHHHHHHHhCCCEEE
Confidence 33211 12222211 23 5999999987653311100 011345788899999999999
Q ss_pred eccccc-ceeeecc
Q 012895 334 AGHVHA-YERFTRI 346 (454)
Q Consensus 334 ~GH~H~-y~r~~~~ 346 (454)
+||.|. |++..+-
T Consensus 222 ~gH~H~~f~~~~~~ 235 (262)
T cd00844 222 SAHLHVKFAALVPH 235 (262)
T ss_pred EecCCcccceecCC
Confidence 999999 6766543
|
Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s |
| >cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.71 E-value=4.1e-07 Score=87.99 Aligned_cols=189 Identities=19% Similarity=0.174 Sum_probs=91.2
Q ss_pred eEEEEEecCCCCCC---------------hHHHHHHhhcCCCC-eEeecCccccCCCChhhHHHHhhhhhhhhcCCCeee
Q 012895 148 IEFAIVGDLGQTEW---------------TNSTLDHVGSKDYD-VFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMV 211 (454)
Q Consensus 148 ~~f~~igD~~~~~~---------------~~~~l~~i~~~~pd-~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~ 211 (454)
++|++++|+|..-. ....++++++..++ ++|.+||++........+..-...++.+..--.=+.
T Consensus 1 i~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g~Da~ 80 (288)
T cd07412 1 VQILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAMGVDAS 80 (288)
T ss_pred CeEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhhCCeee
Confidence 47899999985321 12345555555565 788899998644331111111112222222122256
Q ss_pred cCCCcccCCCCCCCcchhhhhhh----------------hccCCCC-------CCCC-CCCceEEEEeCeEE--EEEecc
Q 012895 212 TEGNHEIESIPIILPHAFKAYNA----------------RWLMPYE-------ESGS-SSNLYYSFDIAGAH--IIMLGS 265 (454)
Q Consensus 212 v~GNHD~~~~~~~~~~~~~~~~~----------------~~~~p~~-------~~~~-~~~~~ys~~~g~v~--fi~Lds 265 (454)
++||||+..... .+..+.+ .-..|.- ..+. .-..|.-+++++++ ||++-+
T Consensus 81 t~GNHefd~G~~----~l~~~~~~~~~~~~~~~~~~~~~~a~fp~l~aNv~~~~~~~~~~~py~i~~~~G~kIgviGl~~ 156 (288)
T cd07412 81 AVGNHEFDEGYA----ELLRRINGGCHPTTGCQAGYPFPGANFPYLAANVYDKGTGTPALPPYTIKDVGGVKVGFIGAVT 156 (288)
T ss_pred eecccccccCHH----HHHHHHhccCCccccccccccCcCCCCCEEEEeEEecCCCCcccCCEEEEEECCEEEEEEeecC
Confidence 889999964321 1111111 0011110 0000 11235556788854 555532
Q ss_pred cCC-C--C-------CCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHh--cCCcEEE
Q 012895 266 YTD-F--D-------EDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYN--ARVDVVF 333 (454)
Q Consensus 266 ~~~-~--~-------~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~--~~v~lvl 333 (454)
... . . .-..-.+.+++.+++.+.++.+.+|++.|........... .........+++.+ .++|++|
T Consensus 157 ~~~~~~~~~~~~~g~~f~d~~e~~~~~v~~lr~~~~D~IIvL~H~G~~~~~~~~~--~~~~~~~~~~l~~~~~~~iD~Il 234 (288)
T cd07412 157 KDTPNLVSPDGVAGLEFTDEVEAINAVAPELKAGGVDAIVVLAHEGGSTKGGDDT--CSAASGPIADIVNRLDPDVDVVF 234 (288)
T ss_pred CCccceeccccccCceEcCHHHHHHHHHHHHHHCCCCEEEEEeCCCCCCCCCCcc--ccccChhHHHHHhhcCCCCCEEE
Confidence 110 0 0 0022234455555554434677899999987543221110 00011122333444 3799999
Q ss_pred eccccccee
Q 012895 334 AGHVHAYER 342 (454)
Q Consensus 334 ~GH~H~y~r 342 (454)
+||.|....
T Consensus 235 gGHsH~~~~ 243 (288)
T cd07412 235 AGHTHQAYN 243 (288)
T ss_pred eCccCcccc
Confidence 999998543
|
YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi |
| >COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.2e-07 Score=95.89 Aligned_cols=73 Identities=21% Similarity=0.264 Sum_probs=53.9
Q ss_pred eEEEEEecCCCCC-C-------------hHHHHHHhhcCCCCeEeecCccccCCCChh-hHHHHhhhhhhhhc-CCCeee
Q 012895 148 IEFAIVGDLGQTE-W-------------TNSTLDHVGSKDYDVFLLPGDLSYADFQQP-LWDSFGRLVEPYAS-SRPWMV 211 (454)
Q Consensus 148 ~~f~~igD~~~~~-~-------------~~~~l~~i~~~~pd~vl~~GDl~y~~~~~~-~~~~~~~~~~~l~~-~~P~~~ 211 (454)
+||++++|+|.+. . ...+++.+.+.++||||++||+.+...+.. .-..+.+.++++.. .+|+++
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~~ 80 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPVVV 80 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcEEE
Confidence 6899999999982 1 123556667899999999999998765532 22345566666653 599999
Q ss_pred cCCCcccCC
Q 012895 212 TEGNHEIES 220 (454)
Q Consensus 212 v~GNHD~~~ 220 (454)
+.||||...
T Consensus 81 I~GNHD~~~ 89 (390)
T COG0420 81 IAGNHDSPS 89 (390)
T ss_pred ecCCCCchh
Confidence 999999854
|
|
| >cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.62 E-value=6.6e-07 Score=85.51 Aligned_cols=156 Identities=15% Similarity=0.132 Sum_probs=80.4
Q ss_pred HHHHHhhcC-CCCeE-eecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCCCCcchhhhhhhhccCCCC
Q 012895 164 STLDHVGSK-DYDVF-LLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYE 241 (454)
Q Consensus 164 ~~l~~i~~~-~pd~v-l~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~ 241 (454)
..++++++. .+|.+ +.+||++..... ..+......++.+. ..++.++.||||+..... .+....+.+..|.-
T Consensus 40 ~~v~~~~~~~~~~~l~l~~GD~~~gs~~-~~~~~g~~~~~~l~-~~g~da~~GNHefd~g~~----~l~~~~~~~~~~~l 113 (264)
T cd07411 40 TLIKRIRAERNPNTLLLDGGDTWQGSGE-ALYTRGQAMVDALN-ALGVDAMVGHWEFTYGPE----RVRELFGRLNWPFL 113 (264)
T ss_pred HHHHHHHHhcCCCeEEEeCCCccCCChH-HhhcCChhHHHHHH-hhCCeEEecccccccCHH----HHHHHHhhCCCCEE
Confidence 355666666 89977 569999965432 22222122222222 255555559999864322 33333333333321
Q ss_pred CC-------C-CCCCceEEEEeCe--EEEEEecccCCCC--C--------CHHHHHHHHHHHHhhc-cCCCCeEEEEEcc
Q 012895 242 ES-------G-SSSNLYYSFDIAG--AHIIMLGSYTDFD--E--------DSAQYKWLKADLAKIN-RKKTPWIFVLLHA 300 (454)
Q Consensus 242 ~~-------~-~~~~~~ys~~~g~--v~fi~Lds~~~~~--~--------~~~Q~~WL~~~L~~~~-~~~~~w~Iv~~H~ 300 (454)
.+ + ..-..|.-++.++ +.||++.+..... . .....+.+++.+.+.. .++.+.+|++.|.
T Consensus 114 ~aN~~~~~~~~~~~~~~~i~~~~g~kVgviG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~iI~l~H~ 193 (264)
T cd07411 114 AANVYDDEAGERVFPPYRIKEVGGVKIGVIGQTFPYVPIANPPRFTPGLTFGIREEELQEVVVKLRREEGVDVVVLLSHN 193 (264)
T ss_pred EEEEEeCCCCCcccCCEEEEEECCEEEEEEEeccCCcccccCcCCCCCcEECCHHHHHHHHHHHHHHhCCCCEEEEEecC
Confidence 10 0 0112355567888 4556665421100 0 1223445555533332 2356789999998
Q ss_pred ccccCCCCCCCCcHHHHHHHHHHHHh-cCCcEEEecccccc
Q 012895 301 PWYNTNTAHQGEGESMRNSMEELLYN-ARVDVVFAGHVHAY 340 (454)
Q Consensus 301 P~~~~~~~~~~~~~~~~~~l~~ll~~-~~v~lvl~GH~H~y 340 (454)
+... . ..+ .++ .++|++|+||.|..
T Consensus 194 g~~~--------~----~~l---a~~~~~iDlilgGH~H~~ 219 (264)
T cd07411 194 GLPV--------D----VEL---AERVPGIDVILSGHTHER 219 (264)
T ss_pred Cchh--------h----HHH---HhcCCCCcEEEeCccccc
Confidence 7421 0 122 222 47999999999974
|
SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy |
| >cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.60 E-value=6.9e-07 Score=85.02 Aligned_cols=182 Identities=18% Similarity=0.144 Sum_probs=91.1
Q ss_pred eEEEEEecCCCCCCh-----------HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCc
Q 012895 148 IEFAIVGDLGQTEWT-----------NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNH 216 (454)
Q Consensus 148 ~~f~~igD~~~~~~~-----------~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNH 216 (454)
+++++++|+|..... ...++++++.+.++++.+||++..... ..+..-...++.+...-.-+.++|||
T Consensus 1 i~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~-~~~~~g~~~~~~ln~~g~d~~~~GNH 79 (257)
T cd07408 1 ITILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPI-SDLDKGETIIKIMNAVGYDAVTPGNH 79 (257)
T ss_pred CEEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchh-hhhcCCcHHHHHHHhcCCcEEccccc
Confidence 589999999864211 234455554467899999999865332 11111112223332222234578999
Q ss_pred ccCCCCCCCcchhhhhhhhccCCCCC-------CCCC-CCceEEEEeC-e--EEEEEecccCC-C----C--CC---HHH
Q 012895 217 EIESIPIILPHAFKAYNARWLMPYEE-------SGSS-SNLYYSFDIA-G--AHIIMLGSYTD-F----D--ED---SAQ 275 (454)
Q Consensus 217 D~~~~~~~~~~~~~~~~~~~~~p~~~-------~~~~-~~~~ys~~~g-~--v~fi~Lds~~~-~----~--~~---~~Q 275 (454)
|+.... ..+..+.+.+..|.-. .+.. -..|.-++.+ + +-|+++-+... . . .+ ..-
T Consensus 80 efd~G~----~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~py~i~~~~~G~kIgviG~~~~~~~~~~~~~~~~~~~~~d~ 155 (257)
T cd07408 80 EFDYGL----DRLKELSKEADFPFLSANVYDNDTGKRVFKPYKIKELGNGVKVGVIGLTTPETATKTHPKNVKDVTFEDP 155 (257)
T ss_pred cccCCH----HHHHHHHhhCCCCEEEEEEEEcCCCCcccCCEEEEEcCCCCEEEEEeecCcCcccccCccccCCcEEecH
Confidence 995432 2333333333333310 0110 1124445777 6 55666644210 0 0 00 112
Q ss_pred HHHHHHH-HHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeccccccee
Q 012895 276 YKWLKAD-LAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYER 342 (454)
Q Consensus 276 ~~WL~~~-L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r 342 (454)
.+-+++. ..+..+++.+.+|++.|.+....... . ....+.+ .-.++|++|.||.|....
T Consensus 156 ~~~~~~~~v~~l~~~~~D~iIvl~H~G~~~~~~~---~---~~~~la~--~~~giDvIigGH~H~~~~ 215 (257)
T cd07408 156 IEEAKKVIVAALKAKGADVIVALGHLGVDRTSSP---W---TSTELAA--NVTGIDLIIDGHSHTTIE 215 (257)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEeCcCcCCCCCC---c---cHHHHHH--hCCCceEEEeCCCccccc
Confidence 2333333 22222336778999999886433110 0 1122222 124799999999998543
|
SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet |
| >COG0622 Predicted phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.60 E-value=3.1e-06 Score=74.77 Aligned_cols=63 Identities=14% Similarity=0.156 Sum_probs=45.3
Q ss_pred eEEEEEecCCCCCC-hHHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccC
Q 012895 148 IEFAIVGDLGQTEW-TNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIE 219 (454)
Q Consensus 148 ~~f~~igD~~~~~~-~~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~ 219 (454)
++++++||+|.... .....+.....++|+|||+||.+...... .+ +.. -..++++|.||.|..
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~~~----~l----~~~-~~~~i~~V~GN~D~~ 65 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFTLD----AL----EGG-LAAKLIAVRGNCDGE 65 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccchH----Hh----hcc-cccceEEEEccCCCc
Confidence 68999999998764 23455555678999999999999754321 11 110 137899999999984
|
|
| >COG2908 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.5e-07 Score=85.72 Aligned_cols=68 Identities=18% Similarity=0.160 Sum_probs=43.5
Q ss_pred EEEecCCCCCChH----HHHHHhhcC--CCCeEeecCccccCC----CChhhHHHHhhhhhhhhcC-CCeeecCCCccc
Q 012895 151 AIVGDLGQTEWTN----STLDHVGSK--DYDVFLLPGDLSYAD----FQQPLWDSFGRLVEPYASS-RPWMVTEGNHEI 218 (454)
Q Consensus 151 ~~igD~~~~~~~~----~~l~~i~~~--~pd~vl~~GDl~y~~----~~~~~~~~~~~~~~~l~~~-~P~~~v~GNHD~ 218 (454)
++|||.|.+.... -.++-++.. +.|.++++||+++.- .+...-++....+..+..+ .|+|+++||||+
T Consensus 1 lFISDlHL~~~~p~~t~~fl~Fl~~~a~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a~~G~~v~~i~GN~Df 79 (237)
T COG2908 1 LFISDLHLGPKRPALTAFFLDFLREEAAQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLARKGTRVYYIHGNHDF 79 (237)
T ss_pred CeeeccccCCCCcHHHHHHHHHHHhccccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHHHhcCCeEEEecCchHH
Confidence 3799999984432 233444433 559999999998632 1222223333444445444 999999999997
|
|
| >cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.54 E-value=1.3e-06 Score=84.25 Aligned_cols=173 Identities=15% Similarity=0.182 Sum_probs=90.8
Q ss_pred eEEEEEecCCCCCC----------------------hHHHHHHhhcCCCCe-EeecCccccCCCChhh--HHHHhhhhhh
Q 012895 148 IEFAIVGDLGQTEW----------------------TNSTLDHVGSKDYDV-FLLPGDLSYADFQQPL--WDSFGRLVEP 202 (454)
Q Consensus 148 ~~f~~igD~~~~~~----------------------~~~~l~~i~~~~pd~-vl~~GDl~y~~~~~~~--~~~~~~~~~~ 202 (454)
++|++.+|+|..-. ....++++++..++. ++.+||++........ .+...+.+..
T Consensus 1 l~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~ 80 (281)
T cd07409 1 LTILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNL 80 (281)
T ss_pred CEEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHh
Confidence 47889999885310 023455666667775 5559999875432111 1122223322
Q ss_pred hhcCCCeeecCCCcccCCCCCCCcchhhhhhhhccCCCCC------CC-----CCCCceEEEEeCeEE--EEEecccCC-
Q 012895 203 YASSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEE------SG-----SSSNLYYSFDIAGAH--IIMLGSYTD- 268 (454)
Q Consensus 203 l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~------~~-----~~~~~~ys~~~g~v~--fi~Lds~~~- 268 (454)
+. .. +.++||||+..... .+..+.+....|.-. .+ ..-..|.-++.++++ ||++-+...
T Consensus 81 ~g--~D-~~~lGNHefd~G~~----~l~~~~~~~~~p~l~aNv~~~~~~~~~~~~~~p~~i~~~~G~kIgviG~~~~~~~ 153 (281)
T cd07409 81 LG--YD-AMTLGNHEFDDGVE----GLAPFLNNLKFPVLSANIDTSNEPPLLDGLLKPSTILTVGGEKIGIIGYTTPDTT 153 (281)
T ss_pred cC--CC-EEEeccccccCCHH----HHHHHHHhCCCCEEEEeeecCCCccccccccCCeEEEEECCEEEEEEEEecCccc
Confidence 21 33 45789999965432 333333333333211 00 001235567788855 555543211
Q ss_pred -C-C--C---CHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccce
Q 012895 269 -F-D--E---DSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYE 341 (454)
Q Consensus 269 -~-~--~---~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~ 341 (454)
. . . -.+..+.+++.+++.+.++.+.+|++.|...- ....+.+.+ .++|++++||.|...
T Consensus 154 ~~~~~~~~~~~~d~~~~~~~~v~~lr~~~~D~II~l~H~G~~------------~d~~la~~~--~giD~IiggH~H~~~ 219 (281)
T cd07409 154 ELSSPGGKVKFLDEIEAAQKEADKLKAQGVNKIIALSHSGYE------------VDKEIARKV--PGVDVIVGGHSHTFL 219 (281)
T ss_pred ccccCCCceEECCHHHHHHHHHHHHHhcCCCEEEEEeccCch------------hHHHHHHcC--CCCcEEEeCCcCccc
Confidence 0 0 0 12334556666666655467788999998631 112222222 479999999999853
|
CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si |
| >cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.49 E-value=7.5e-06 Score=77.21 Aligned_cols=183 Identities=19% Similarity=0.223 Sum_probs=95.7
Q ss_pred EEEEEecCCCCCCh---HHHHHHhh-cCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCCC
Q 012895 149 EFAIVGDLGQTEWT---NSTLDHVG-SKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPII 224 (454)
Q Consensus 149 ~f~~igD~~~~~~~---~~~l~~i~-~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~ 224 (454)
|++++||.-..... ...+..++ +.++||+|..||++-.+.... ....+.+..+. +-+ .+.|||+++..
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~--~~~~~~L~~~G--~D~-iTlGNH~fD~g--- 72 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGIT--PKIAKELLSAG--VDV-ITMGNHTWDKK--- 72 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCC--HHHHHHHHhcC--CCE-EEecccccCcc---
Confidence 58999998433222 23444454 567999999999986542111 11222222221 444 46699999643
Q ss_pred Ccchhhhhhhhc---cCCCCC-CCCCCCceEEEEeCeEEEEEecc--cCCCCCCHHHHHHHHHHHHhhccCCCCeEEEEE
Q 012895 225 LPHAFKAYNARW---LMPYEE-SGSSSNLYYSFDIAGAHIIMLGS--YTDFDEDSAQYKWLKADLAKINRKKTPWIFVLL 298 (454)
Q Consensus 225 ~~~~~~~~~~~~---~~p~~~-~~~~~~~~ys~~~g~v~fi~Lds--~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~ 298 (454)
....+.+.. -.|.+- ...+...|.-++.++.++-+++- .........-.+-+++.+++.+. +.+.+||.+
T Consensus 73 ---el~~~l~~~~~~l~~aN~~~~~pg~~~~i~~~~G~kIaVigl~g~~~~~~~~~P~~~~~~~v~~lk~-~~D~IIV~~ 148 (255)
T cd07382 73 ---EILDFIDEEPRLLRPANYPPGTPGRGYGVVEVNGKKIAVINLMGRVFMPPLDNPFRAADELLEELKE-EADIIFVDF 148 (255)
T ss_pred ---hHHHHHhcCcCceEeeecCCCCCCCCeEEEEECCEEEEEEEEecccCCCcCCCHHHHHHHHHHHHhc-CCCEEEEEE
Confidence 122222211 111111 11123457777888866555442 21111112223446666666544 567899999
Q ss_pred ccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCCcCCCCcEEEE
Q 012895 299 HAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYIT 360 (454)
Q Consensus 299 H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~ 360 (454)
|.-.. ..+..+... -..+||+++.||+|..-.-.++ -|+|+.|++
T Consensus 149 H~g~t-----------sEk~ala~~-ldg~VdvIvGtHTHv~t~d~~i-----l~~gTa~it 193 (255)
T cd07382 149 HAEAT-----------SEKIALGWY-LDGRVSAVVGTHTHVQTADERI-----LPGGTAYIT 193 (255)
T ss_pred CCCCC-----------HHHHHHHHh-CCCCceEEEeCCCCccCCccEE-----eeCCeEEEe
Confidence 97421 112233321 2335999999999984222211 146888876
|
DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=98.49 E-value=1.3e-06 Score=86.00 Aligned_cols=113 Identities=15% Similarity=0.120 Sum_probs=73.6
Q ss_pred CCCeEEEEEecCCCCCCh------------------HHHHHHh-hcCCCCeEeecCccccCCCC--hhhHHHHhhhhhhh
Q 012895 145 NFPIEFAIVGDLGQTEWT------------------NSTLDHV-GSKDYDVFLLPGDLSYADFQ--QPLWDSFGRLVEPY 203 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~~------------------~~~l~~i-~~~~pd~vl~~GDl~y~~~~--~~~~~~~~~~~~~l 203 (454)
+..+|++.++|.|.-+.. +.....+ ...+||.++++||+.+++.+ .++|....+-++++
T Consensus 46 ~n~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkI 125 (410)
T KOG3662|consen 46 ENSTKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKI 125 (410)
T ss_pred CCceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEeccccccCccCChHHHHHHHHHHHHh
Confidence 578999999999875421 1122222 26799999999999986654 45664433333333
Q ss_pred h---cCCCeeecCCCcccCCCCCCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccC
Q 012895 204 A---SSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYT 267 (454)
Q Consensus 204 ~---~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~ 267 (454)
. ..+|++.++||||++.....-......|...|. +....|++++..|+++|+..
T Consensus 126 f~~k~~~~~~~i~GNhDIGf~~~~~~~~i~Rfe~~fg----------~~~r~f~v~~~tf~~~d~~~ 182 (410)
T KOG3662|consen 126 FGRKGNIKVIYIAGNHDIGFGNELIPEWIDRFESVFG----------PTERRFDVGNLTFVMFDSNA 182 (410)
T ss_pred hCCCCCCeeEEeCCccccccccccchhHHHHHHHhhc----------chhhhhccCCceeEEeeehh
Confidence 2 259999999999997654321112233433332 34566899999999999864
|
|
| >PRK04036 DNA polymerase II small subunit; Validated | Back alignment and domain information |
|---|
Probab=98.45 E-value=1.9e-06 Score=89.59 Aligned_cols=76 Identities=11% Similarity=0.174 Sum_probs=53.8
Q ss_pred CCCeEEEEEecCCCCCCh------HHHHHHhh---------cCCCCeEeecCccccCCCC-------------hhhHHHH
Q 012895 145 NFPIEFAIVGDLGQTEWT------NSTLDHVG---------SKDYDVFLLPGDLSYADFQ-------------QPLWDSF 196 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~~------~~~l~~i~---------~~~pd~vl~~GDl~y~~~~-------------~~~~~~~ 196 (454)
..++++++++|+|.+... +..++.+. ..+++.+|++||+++..+. ...++.+
T Consensus 241 ~~~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l 320 (504)
T PRK04036 241 DEKVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAA 320 (504)
T ss_pred CCccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHH
Confidence 567899999999976532 23344555 5679999999999974221 0123445
Q ss_pred hhhhhhhhcCCCeeecCCCcccCC
Q 012895 197 GRLVEPYASSRPWMVTEGNHEIES 220 (454)
Q Consensus 197 ~~~~~~l~~~~P~~~v~GNHD~~~ 220 (454)
.++++.+...+|+++++||||...
T Consensus 321 ~~~L~~L~~~i~V~~ipGNHD~~~ 344 (504)
T PRK04036 321 AEYLKQIPEDIKIIISPGNHDAVR 344 (504)
T ss_pred HHHHHhhhcCCeEEEecCCCcchh
Confidence 566777766789999999999853
|
|
| >TIGR00619 sbcd exonuclease SbcD | Back alignment and domain information |
|---|
Probab=98.42 E-value=5.5e-07 Score=85.38 Aligned_cols=72 Identities=17% Similarity=0.266 Sum_probs=51.6
Q ss_pred eEEEEEecCCCCCCh-------------HHHHHHhhcCCCCeEeecCccccCCCChh-hHHHHhhhhhhhhc-C-CCeee
Q 012895 148 IEFAIVGDLGQTEWT-------------NSTLDHVGSKDYDVFLLPGDLSYADFQQP-LWDSFGRLVEPYAS-S-RPWMV 211 (454)
Q Consensus 148 ~~f~~igD~~~~~~~-------------~~~l~~i~~~~pd~vl~~GDl~y~~~~~~-~~~~~~~~~~~l~~-~-~P~~~ 211 (454)
+||++++|+|.+... ..+++.+.+.++|+||++||+++...... ....+.+.++++.. . +|+++
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~~ 80 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIVV 80 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEEE
Confidence 689999999986431 12344455789999999999998665422 22335566666654 3 89999
Q ss_pred cCCCcccC
Q 012895 212 TEGNHEIE 219 (454)
Q Consensus 212 v~GNHD~~ 219 (454)
++||||..
T Consensus 81 i~GNHD~~ 88 (253)
T TIGR00619 81 ISGNHDSA 88 (253)
T ss_pred EccCCCCh
Confidence 99999984
|
This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). |
| >cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.37 E-value=4e-06 Score=79.14 Aligned_cols=69 Identities=13% Similarity=0.183 Sum_probs=46.7
Q ss_pred EEEecCCCCCCh--H----HHHHHhhcC-----CCCeEeecCccccCCCC-------------hhhHHHHhhhhhhhhcC
Q 012895 151 AIVGDLGQTEWT--N----STLDHVGSK-----DYDVFLLPGDLSYADFQ-------------QPLWDSFGRLVEPYASS 206 (454)
Q Consensus 151 ~~igD~~~~~~~--~----~~l~~i~~~-----~pd~vl~~GDl~y~~~~-------------~~~~~~~~~~~~~l~~~ 206 (454)
++++|+|.+... . ..++.+... ++|.|+++||+++.... ...+..+.++++.+...
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~ 81 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVPSH 81 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcccC
Confidence 689999975432 1 233444332 57999999999975210 11234455666777667
Q ss_pred CCeeecCCCcccC
Q 012895 207 RPWMVTEGNHEIE 219 (454)
Q Consensus 207 ~P~~~v~GNHD~~ 219 (454)
+|+++++||||..
T Consensus 82 ~~v~~ipGNHD~~ 94 (243)
T cd07386 82 IKIIIIPGNHDAV 94 (243)
T ss_pred CeEEEeCCCCCcc
Confidence 9999999999985
|
The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera |
| >PRK10966 exonuclease subunit SbcD; Provisional | Back alignment and domain information |
|---|
Probab=98.34 E-value=1.1e-06 Score=88.95 Aligned_cols=72 Identities=17% Similarity=0.226 Sum_probs=50.4
Q ss_pred eEEEEEecCCCCCCh-------------HHHHHHhhcCCCCeEeecCccccCCCChhhH-HHHhhhhhhhhc-CCCeeec
Q 012895 148 IEFAIVGDLGQTEWT-------------NSTLDHVGSKDYDVFLLPGDLSYADFQQPLW-DSFGRLVEPYAS-SRPWMVT 212 (454)
Q Consensus 148 ~~f~~igD~~~~~~~-------------~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~-~~~~~~~~~l~~-~~P~~~v 212 (454)
+||++++|+|.+... ..+++.+.+.+||+||++||+++........ ..+.+++..+.. .+|++++
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~~~~~v~~I 80 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQTGCQLVVL 80 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 689999999986321 1234455688999999999999765442221 234455555543 3899999
Q ss_pred CCCcccC
Q 012895 213 EGNHEIE 219 (454)
Q Consensus 213 ~GNHD~~ 219 (454)
+||||..
T Consensus 81 ~GNHD~~ 87 (407)
T PRK10966 81 AGNHDSV 87 (407)
T ss_pred cCCCCCh
Confidence 9999984
|
|
| >cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.1e-06 Score=80.81 Aligned_cols=64 Identities=25% Similarity=0.213 Sum_probs=42.5
Q ss_pred EEEEEecCCCCCCh-HHHHHHhhc-CCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccC
Q 012895 149 EFAIVGDLGQTEWT-NSTLDHVGS-KDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIE 219 (454)
Q Consensus 149 ~f~~igD~~~~~~~-~~~l~~i~~-~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~ 219 (454)
|++++||+|..... .++++.+.. .++|.++++||+++.+.... +.++.+.. .+++++.||||..
T Consensus 2 ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~~------~~~~~l~~-~~~~~v~GNhe~~ 67 (207)
T cd07424 2 RDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLIDRGPESL------ACLELLLE-PWFHAVRGNHEQM 67 (207)
T ss_pred CEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCHH------HHHHHHhc-CCEEEeECCChHH
Confidence 68999999965322 234444432 46999999999998654421 22333322 4689999999973
|
PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all |
| >cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.32 E-value=7.9e-07 Score=81.68 Aligned_cols=66 Identities=18% Similarity=0.086 Sum_probs=42.6
Q ss_pred EEEecCCCCCC-hHHHHHHhh--------cCCCCeEeecCccccCCCChhhHHHHhhhhhhhh-----cCCCeeecCCCc
Q 012895 151 AIVGDLGQTEW-TNSTLDHVG--------SKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYA-----SSRPWMVTEGNH 216 (454)
Q Consensus 151 ~~igD~~~~~~-~~~~l~~i~--------~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~-----~~~P~~~v~GNH 216 (454)
+++||+|.... ..++++.+. ..+.|.++++||+++.+....+ ..+.+..+. ...+++++.|||
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~---vl~~l~~l~~~~~~~~~~v~~l~GNH 77 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIE---ILWLLYKLEQEAAKAGGKVHFLLGNH 77 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHH---HHHHHHHHHHHHHhcCCeEEEeeCCC
Confidence 47999997643 234555443 2468999999999986654321 222222222 236799999999
Q ss_pred ccC
Q 012895 217 EIE 219 (454)
Q Consensus 217 D~~ 219 (454)
|..
T Consensus 78 E~~ 80 (208)
T cd07425 78 ELM 80 (208)
T ss_pred cHH
Confidence 984
|
This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal |
| >cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.1e-05 Score=77.88 Aligned_cols=187 Identities=17% Similarity=0.176 Sum_probs=88.2
Q ss_pred eEEEEEecCCCCCCh-----------HHHHHHhhcC----CC-CeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeee
Q 012895 148 IEFAIVGDLGQTEWT-----------NSTLDHVGSK----DY-DVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMV 211 (454)
Q Consensus 148 ~~f~~igD~~~~~~~-----------~~~l~~i~~~----~p-d~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~ 211 (454)
+++++.+|+|..-.. ...++++++. .+ -+++.+||++..... ..+..-...++.+..---=+.
T Consensus 1 ltIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~-~~~~~g~~~~~~~n~~g~Da~ 79 (285)
T cd07405 1 ITILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPE-SDLQDAEPDFRGMNLVGYDAM 79 (285)
T ss_pred CEEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchh-HHhcCcchHHHHHHhhCCcEE
Confidence 578999999874211 2345555432 33 478889999854332 111111111121221122345
Q ss_pred cCCCcccCCCCCCCcchhhhhhhhccCCCCC------CCC-CCCceEEEEeCeEE--EEEecccCC-C--C----CC---
Q 012895 212 TEGNHEIESIPIILPHAFKAYNARWLMPYEE------SGS-SSNLYYSFDIAGAH--IIMLGSYTD-F--D----ED--- 272 (454)
Q Consensus 212 v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~------~~~-~~~~~ys~~~g~v~--fi~Lds~~~-~--~----~~--- 272 (454)
++||||+..... .+.........|.-. .+. .-..|.-++.++++ ||++-+... . . .+
T Consensus 80 ~~GNHEfD~G~~----~L~~~~~~~~fp~l~aNv~~~~g~~~~~p~~i~~~~G~kIgviG~t~~~~~~~~~~~~~~~~~f 155 (285)
T cd07405 80 AVGNHEFDNPLE----VLRQQMKWANFPLLSANIYQESGERLFKPYALFDLGGLKIAVIGLTTDDTAKIGNPAYFEGIEF 155 (285)
T ss_pred eecccccccCHH----HHHHHHhhCCCCEEEEEEEecCCCCccCCeEEEEECCEEEEEEEecccccccccCcCCcCCcEE
Confidence 779999965422 222222211122110 011 11235567788855 455543110 0 0 00
Q ss_pred HHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccce
Q 012895 273 SAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYE 341 (454)
Q Consensus 273 ~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~ 341 (454)
....+=+++.+++.+.++.+.+|++.|......... .........+.+.+...++|++|.||.|...
T Consensus 156 ~d~~~~~~~~v~~lk~~~~D~VI~lsH~G~~~~~~~--~~~~~~~~~lA~~~~~~giD~IigGHsH~~~ 222 (285)
T cd07405 156 RPPIHEAKEVVPELKQEKPDIVIAATHMGHYDNGEH--GSNAPGDVEMARALPAGGLDLIVGGHSQDPV 222 (285)
T ss_pred cCHHHHHHHHHHHHHHcCCCEEEEEecccccCCccc--cccCchHHHHHHhcCCCCCCEEEeCCCCccc
Confidence 112222333333332236678999999886432210 1110111233333333589999999999854
|
UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs |
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.4e-05 Score=91.50 Aligned_cols=184 Identities=17% Similarity=0.142 Sum_probs=96.0
Q ss_pred CCeEEEEEecCCCCCCh----HHHHHHhhcCCCCeEee-cCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCC
Q 012895 146 FPIEFAIVGDLGQTEWT----NSTLDHVGSKDYDVFLL-PGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIES 220 (454)
Q Consensus 146 ~~~~f~~igD~~~~~~~----~~~l~~i~~~~pd~vl~-~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~ 220 (454)
..++|++++|+|..... ...++++++.+|+.+++ +||++..... ..+......++.+..--.-+.++||||+..
T Consensus 659 ~~l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~-~~~~~g~~~~~~ln~lg~d~~~~GNHEfd~ 737 (1163)
T PRK09419 659 WELTILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLY-SNLLKGLPVLKMMKEMGYDASTFGNHEFDW 737 (1163)
T ss_pred eEEEEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcch-hhhcCChHHHHHHhCcCCCEEEeccccccc
Confidence 45999999999954322 34566667778998766 9999865432 111111122233322233466999999964
Q ss_pred CCCCCcchhhhhhhhcc------------CCCC-------CCCC---CCCceEEEEeCeE--EEEEecccCC--CC-C--
Q 012895 221 IPIILPHAFKAYNARWL------------MPYE-------ESGS---SSNLYYSFDIAGA--HIIMLGSYTD--FD-E-- 271 (454)
Q Consensus 221 ~~~~~~~~~~~~~~~~~------------~p~~-------~~~~---~~~~~ys~~~g~v--~fi~Lds~~~--~~-~-- 271 (454)
... .+..+.+... .|.- ..+. .-..|.-++.+++ -||++-+... .. .
T Consensus 738 g~~----~l~~~l~~~~~~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~I~e~~G~kIgiiGltt~~~~~~~~p~~ 813 (1163)
T PRK09419 738 GPD----VLPDWLKGGGDPKNRHQFEKPDFPFVASNIYVKKTGKLVSWAKPYILVEVNGKKVGFIGLTTPETAYKTSPGN 813 (1163)
T ss_pred ChH----HHHHHHHhcccccccccccCCCCCEEEEEEEeCCCCccccccCCEEEEEECCEEEEEEEecccccccccCCCC
Confidence 432 2222211111 1110 0111 0124556678884 4566643210 00 0
Q ss_pred -----CHHHHHHHHHHHHhhc-cCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhc-CCcEEEecccccce
Q 012895 272 -----DSAQYKWLKADLAKIN-RKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNA-RVDVVFAGHVHAYE 341 (454)
Q Consensus 272 -----~~~Q~~WL~~~L~~~~-~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~-~v~lvl~GH~H~y~ 341 (454)
-....+.+++..++.+ .++.+.+|++.|......... .+ ....++.++. +||++|.||.|..-
T Consensus 814 ~~~l~f~d~~e~~~~~v~~Lr~~~~~D~VV~LsH~G~~~d~~~--~~-----~~~~~lA~~v~gIDvIigGHsH~~~ 883 (1163)
T PRK09419 814 VKNLEFKDPAEAAKKWVKELKEKEKVDAIIALTHLGSNQDRTT--GE-----ITGLELAKKVKGVDAIISAHTHTLV 883 (1163)
T ss_pred cCCcEEcCHHHHHHHHHHHHHhhcCCCEEEEEecCCccccccc--cc-----cHHHHHHHhCCCCCEEEeCCCCccc
Confidence 0122334444444443 236778999999886432111 11 1223344443 69999999999843
|
|
| >TIGR00282 metallophosphoesterase, MG_246/BB_0505 family | Back alignment and domain information |
|---|
Probab=98.27 E-value=5.9e-05 Score=71.38 Aligned_cols=190 Identities=21% Similarity=0.272 Sum_probs=102.3
Q ss_pred eEEEEEecCCCCCChH----HHHHHhh-cCCCCeEeecCccccCC-CChhhHHHHhhhhhhhhc-CCCeeecCCCcccCC
Q 012895 148 IEFAIVGDLGQTEWTN----STLDHVG-SKDYDVFLLPGDLSYAD-FQQPLWDSFGRLVEPYAS-SRPWMVTEGNHEIES 220 (454)
Q Consensus 148 ~~f~~igD~~~~~~~~----~~l~~i~-~~~pd~vl~~GDl~y~~-~~~~~~~~~~~~~~~l~~-~~P~~~v~GNHD~~~ 220 (454)
+|++++||.-.. ..+ ..+..++ +.++||++..||++-.+ +... +..+.+.. .+-++ +.|||+++.
T Consensus 1 m~ilfiGDi~G~-~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~------~~~~~L~~~GvDvi-T~GNH~~Dk 72 (266)
T TIGR00282 1 IKFLFIGDVYGK-AGRKIVKNNLPQLKSKYQADLVIANGENTTHGKGLTL------KIYEFLKQSGVNYI-TMGNHTWFQ 72 (266)
T ss_pred CeEEEEEecCCH-HHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCCH------HHHHHHHhcCCCEE-EccchhccC
Confidence 589999998432 223 3444454 56799999999998543 1111 12222222 25565 459999964
Q ss_pred CCCCCcchhhhhhhhccCCCCC-CCCCCCceEEEEeCeEEEEEecccC-CCC-C--CHHHHHHHHHHHHhhccCCCCeEE
Q 012895 221 IPIILPHAFKAYNARWLMPYEE-SGSSSNLYYSFDIAGAHIIMLGSYT-DFD-E--DSAQYKWLKADLAKINRKKTPWIF 295 (454)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~ys~~~g~v~fi~Lds~~-~~~-~--~~~Q~~WL~~~L~~~~~~~~~w~I 295 (454)
.... ....... +.-.|.+- .+..+..|..++.++.++-+++-.. .+. . ...-.+-+++.+++.+. +++.+|
T Consensus 73 ge~~--~~i~~~~-~~lrpanyp~~~pG~g~~i~~~nG~kiaVinl~G~~fm~~~~~~~Pf~~~d~~i~~lk~-~~d~II 148 (266)
T TIGR00282 73 KLIL--DVVINQK-DLVRPLNFDTSFAGKGSLVFEFNGAKIAVTNLQGTSVNLPFKTTNPFKVLKELINMLKK-DCDLIF 148 (266)
T ss_pred cHHH--HHHhccc-cccccCCCCCCCCCCCcEEEEECCEEEEEEECCCcccCCccccCCHHHHHHHHHHhhhc-CCCEEE
Confidence 3210 0011111 11112211 1122345666788876665555311 111 1 11223335555555443 466799
Q ss_pred EEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCCcCCCCcEEEE-ECCCCC
Q 012895 296 VLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYIT-IGDGGN 366 (454)
Q Consensus 296 v~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~-~G~gG~ 366 (454)
|.+|.-. ... +.....+-+.+|++|+.-|+|..---.++. |+|+.|++ +|.-|.
T Consensus 149 Vd~Haea-----------tsE-K~a~~~~ldg~vsaVvGtHtHV~TaD~~il-----~~gtayitD~Gm~G~ 203 (266)
T TIGR00282 149 VDFHAET-----------TSE-KNAFGMAFDGYVTAVVGTHTHVPTADLRIL-----PKGTAYITDVGMTGP 203 (266)
T ss_pred EEeCCCC-----------HHH-HHHHHHHhCCCccEEEeCCCCCCCCcceeC-----CCCCEEEecCCcccC
Confidence 9999642 112 444566677899999999999843222222 57899987 354444
|
A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase. |
| >PRK11439 pphA serine/threonine protein phosphatase 1; Provisional | Back alignment and domain information |
|---|
Probab=98.23 E-value=2.9e-06 Score=78.66 Aligned_cols=73 Identities=21% Similarity=0.121 Sum_probs=48.0
Q ss_pred EECCCCCCCeEEEEEecCCCCCC-hHHHHHHhhcC-CCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCc
Q 012895 139 FKMPPANFPIEFAIVGDLGQTEW-TNSTLDHVGSK-DYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNH 216 (454)
Q Consensus 139 F~T~p~~~~~~f~~igD~~~~~~-~~~~l~~i~~~-~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNH 216 (454)
|+..+...--|++++||+|.... ..++++.+... +.|-++++||+++.+.... +.++.+.. ..++.+.|||
T Consensus 8 ~~~~~~~~~~ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~------~vl~~l~~-~~~~~v~GNH 80 (218)
T PRK11439 8 YQRIAGHQWRHIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSL------RCLQLLEE-HWVRAVRGNH 80 (218)
T ss_pred eecccCCCCCeEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHH------HHHHHHHc-CCceEeeCch
Confidence 44444334448999999997643 34566666533 6899999999998765432 22222222 3467899999
Q ss_pred cc
Q 012895 217 EI 218 (454)
Q Consensus 217 D~ 218 (454)
|.
T Consensus 81 E~ 82 (218)
T PRK11439 81 EQ 82 (218)
T ss_pred HH
Confidence 97
|
|
| >PRK09968 serine/threonine-specific protein phosphatase 2; Provisional | Back alignment and domain information |
|---|
Probab=98.18 E-value=4.1e-06 Score=77.56 Aligned_cols=64 Identities=19% Similarity=0.239 Sum_probs=43.6
Q ss_pred eEEEEEecCCCCCC-hHHHHHHhh-cCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCccc
Q 012895 148 IEFAIVGDLGQTEW-TNSTLDHVG-SKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEI 218 (454)
Q Consensus 148 ~~f~~igD~~~~~~-~~~~l~~i~-~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 218 (454)
-|++++||+|.... .+++++.+. ..+.|.++++||+++.+.... +.++.+.. ..++.+.||||.
T Consensus 15 ~ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~------~~l~~l~~-~~~~~v~GNHE~ 80 (218)
T PRK09968 15 RHIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESL------NVLRLLNQ-PWFISVKGNHEA 80 (218)
T ss_pred CeEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHH------HHHHHHhh-CCcEEEECchHH
Confidence 38999999997643 234555554 457899999999998665432 22222222 357789999997
|
|
| >cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.18 E-value=4.7e-05 Score=73.25 Aligned_cols=179 Identities=17% Similarity=0.209 Sum_probs=88.2
Q ss_pred CCeEEEEEecCCCCCC----------h----HHHHHHhh----cCCCC-eEeecCccccCCCChh----hHHHHhhhhhh
Q 012895 146 FPIEFAIVGDLGQTEW----------T----NSTLDHVG----SKDYD-VFLLPGDLSYADFQQP----LWDSFGRLVEP 202 (454)
Q Consensus 146 ~~~~f~~igD~~~~~~----------~----~~~l~~i~----~~~pd-~vl~~GDl~y~~~~~~----~~~~~~~~~~~ 202 (454)
..++|++.+|+|.... . ...++.++ +.+++ ++|..||++....... .+....+.+.
T Consensus 4 ~~ltILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN- 82 (282)
T cd07407 4 GDINFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFR- 82 (282)
T ss_pred ceEEEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHH-
Confidence 5689999999985321 0 12233332 34565 5677999987543311 1222222332
Q ss_pred hhcCCCe-eecCCCcccCCCCCCCcchhhhhhhhccCCCCC------CC--C---CCCceEEEEeC-eEE--EEEecccC
Q 012895 203 YASSRPW-MVTEGNHEIESIPIILPHAFKAYNARWLMPYEE------SG--S---SSNLYYSFDIA-GAH--IIMLGSYT 267 (454)
Q Consensus 203 l~~~~P~-~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~------~~--~---~~~~~ys~~~g-~v~--fi~Lds~~ 267 (454)
..++ ++++||||+...... ...+..+.+....|.-. .. . ....|.-++.+ +++ ||++-+..
T Consensus 83 ---~mgyDa~tlGNHEFd~g~~~-l~~l~~~~~~~~fp~l~aNi~~~~~~~~~~~~~~~y~i~~~~~G~kIgiiGltt~~ 158 (282)
T cd07407 83 ---MMPYDLLTIGNHELYNYEVA-DDEYEGFVPSWGDRYLTSNVDITDDSGLLVPIGSRYRKFTTKHGLRVLAFGFLFDF 158 (282)
T ss_pred ---hcCCcEEeecccccCccccH-HHHHHHHHhhcCCCEEEEEEEEeCCCCcccccccceEEEEcCCCcEEEEEEEeccc
Confidence 2333 468999999533210 00111122222222110 00 0 11235556665 644 56553321
Q ss_pred C-------CCCC--HHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhc-CCc-EEEecc
Q 012895 268 D-------FDED--SAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNA-RVD-VVFAGH 336 (454)
Q Consensus 268 ~-------~~~~--~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~-~v~-lvl~GH 336 (454)
. +... ..+.+|+.+.|++. +.+.+|+++|....... ...+....+.++. ++| ++|.||
T Consensus 159 ~~~~~~~~f~d~~~~~~~~~v~~~l~~~---~~DvIIvlsH~G~~~d~--------~~~~~~~~la~~~~~id~~Ii~GH 227 (282)
T cd07407 159 KGAANGVTVQPVADVVQEPWFQDAINNE---DVDLILVLGHMPVRDDA--------EFKVLHDAIRKIFPDTPIQFLGGH 227 (282)
T ss_pred ccCCCCcEEcCHHHHHHHHHHHHHHHhc---CCCEEEEEeCCCCCCCc--------cHHHHHHHHHHhCCCCCEEEEeCC
Confidence 1 0111 12234777777632 56779999998753220 1111122333344 467 799999
Q ss_pred cccc
Q 012895 337 VHAY 340 (454)
Q Consensus 337 ~H~y 340 (454)
.|..
T Consensus 228 sH~~ 231 (282)
T cd07407 228 SHVR 231 (282)
T ss_pred cccc
Confidence 9974
|
YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at |
| >COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.09 E-value=7.9e-05 Score=78.26 Aligned_cols=182 Identities=16% Similarity=0.117 Sum_probs=99.0
Q ss_pred CCCeEEEEEecCCCCCC------------h----HHHHHHhhcC-CCCeEeecCccccCCCChhh---HHHHhhhhhhhh
Q 012895 145 NFPIEFAIVGDLGQTEW------------T----NSTLDHVGSK-DYDVFLLPGDLSYADFQQPL---WDSFGRLVEPYA 204 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~------------~----~~~l~~i~~~-~pd~vl~~GDl~y~~~~~~~---~~~~~~~~~~l~ 204 (454)
...++|++.+|+|..-. . ...++++++. +..++|.+||++........ .....+.+..+
T Consensus 24 ~~~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m- 102 (517)
T COG0737 24 TVKLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNAL- 102 (517)
T ss_pred ceeEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhc-
Confidence 56799999999986543 1 1234455444 44678889999976443221 11122222222
Q ss_pred cCCCeeecCCCcccCCCCCCCcchhhhhhhhccCCCC------C--CC-CCCCceEEEEeCe--EEEEEecccC--CC--
Q 012895 205 SSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYE------E--SG-SSSNLYYSFDIAG--AHIIMLGSYT--DF-- 269 (454)
Q Consensus 205 ~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~------~--~~-~~~~~~ys~~~g~--v~fi~Lds~~--~~-- 269 (454)
-.=+.+.||||+..... .+..+.+....|.- . .. ..-..|.-++.++ +-+|++.+.. .+
T Consensus 103 --~yDa~tiGNHEFd~g~~----~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~Py~I~~~~g~KIgiIG~~~~~~~~~~~ 176 (517)
T COG0737 103 --GYDAMTLGNHEFDYGLE----ALARLLDEAKFPVLSANVYDKNSTGPPFFKPYAIKEVGGVKIGIIGLTTPTIPTWEK 176 (517)
T ss_pred --CCcEEeecccccccCHH----HHHHHHhccCCceEEeeeEecCCCCccCcCCeEEEecCCeEEEEEEecCCccccccc
Confidence 23356999999965422 22333333333311 0 00 1124577788888 4566665411 11
Q ss_pred -C-----CCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeccccc
Q 012895 270 -D-----EDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHA 339 (454)
Q Consensus 270 -~-----~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~ 339 (454)
. .-....+++++.+.+.+.++.+.+|++.|.+............ ....... .++|+++.||.|.
T Consensus 177 ~~~~~~~~f~d~~e~~~~~i~elk~~~vD~iI~LsH~G~~~d~~~~~~~~-~~~~~~~-----~~iD~i~~GH~H~ 246 (517)
T COG0737 177 PNAIEGVTFRDPIEAAKKYIPELKGEGVDVIIALSHLGIEDDLELASEVP-GDVDVAV-----PGIDLIIGGHSHT 246 (517)
T ss_pred ccccCCcEEcCHHHHHHHHHHHHHhcCCCEEEEEeccCcCcccccccccc-ccccccc-----cCcceEeccCCcc
Confidence 1 1134567777777776654467799999998754422111100 0000000 3499999999996
|
|
| >cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.07 E-value=1.4e-05 Score=69.16 Aligned_cols=118 Identities=17% Similarity=0.132 Sum_probs=73.9
Q ss_pred EEEecCCCCCChHHHHHHhh-----cCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCCCC
Q 012895 151 AIVGDLGQTEWTNSTLDHVG-----SKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPIIL 225 (454)
Q Consensus 151 ~~igD~~~~~~~~~~l~~i~-----~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~ 225 (454)
+++||.+.. ..++++.++ +...|++|.+||+.-.......|..+.. ......+|.|++-|||+
T Consensus 1 LV~G~~~G~--l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~~~~y~~--g~~~~pipTyf~ggn~~-------- 68 (150)
T cd07380 1 LVCGDVNGR--LKALFEKVNTINKKKGPFDALLCVGDFFGDDEDDEELEAYKD--GSKKVPIPTYFLGGNNP-------- 68 (150)
T ss_pred CeeecCCcc--HHHHHHHHHHHhcccCCeeEEEEecCccCCccchhhHHHHhc--CCccCCCCEEEECCCCC--------
Confidence 478888754 344444442 5678999999999865443333333322 12223489999999997
Q ss_pred cchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEEEEEccccccC
Q 012895 226 PHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNT 305 (454)
Q Consensus 226 ~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~ 305 (454)
+.-|+++|.|++..
T Consensus 69 ------------------------------------------------------------------~~DILlTh~wP~gi 82 (150)
T cd07380 69 ------------------------------------------------------------------GVDILLTSEWPKGI 82 (150)
T ss_pred ------------------------------------------------------------------CCCEEECCCCchhh
Confidence 12478888887654
Q ss_pred CCCCCC-----CcHHHHHHHHHHHHhcCCcEEEeccccc-ceeeeccc
Q 012895 306 NTAHQG-----EGESMRNSMEELLYNARVDVVFAGHVHA-YERFTRIY 347 (454)
Q Consensus 306 ~~~~~~-----~~~~~~~~l~~ll~~~~v~lvl~GH~H~-y~r~~~~~ 347 (454)
...... ........+.+++++.++.+.||||.|. |||. |..
T Consensus 83 ~~~~~~~~~~~~~~~GS~~i~~l~~~lkPrYhf~gh~~~fyer~-Pf~ 129 (150)
T cd07380 83 SKLSKVPFEETLLICGSDLIAELAKKLKPRYHFAGLEGVFYERE-PYR 129 (150)
T ss_pred hhhCCCcccccccCCCCHHHHHHHHHcCCCeEeecCCCceEeec-Ccc
Confidence 211100 0112346777888899999999999995 5653 443
|
CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site |
| >PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed | Back alignment and domain information |
|---|
Probab=97.98 E-value=0.00015 Score=76.71 Aligned_cols=189 Identities=16% Similarity=0.192 Sum_probs=89.3
Q ss_pred CCCeEEEEEecCCCCCCh-----------HHHHHHhhc----CCC-CeEeecCccccCCCChhhHHHHhhhhhhhhcCCC
Q 012895 145 NFPIEFAIVGDLGQTEWT-----------NSTLDHVGS----KDY-DVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRP 208 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~~-----------~~~l~~i~~----~~p-d~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P 208 (454)
...++|++++|+|..... ...++++++ ..+ -++|.+||++..... ..+..-...++-+..--.
T Consensus 32 ~~~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~-s~~~~g~~~i~~mN~~g~ 110 (551)
T PRK09558 32 TYKITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPE-SDLQDAEPDFRGMNLIGY 110 (551)
T ss_pred ceEEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEh-hhhcCCchhHHHHhcCCC
Confidence 457899999999875321 123444432 234 467889999864321 111111111121222122
Q ss_pred eeecCCCcccCCCCCCCcchhhhhhhhccCCCC-------CCCC-CCCceEEEEeCeEE--EEEecccCC--C-CC----
Q 012895 209 WMVTEGNHEIESIPIILPHAFKAYNARWLMPYE-------ESGS-SSNLYYSFDIAGAH--IIMLGSYTD--F-DE---- 271 (454)
Q Consensus 209 ~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~-------~~~~-~~~~~ys~~~g~v~--fi~Lds~~~--~-~~---- 271 (454)
=+.++||||+..... .+..+......|.- ..+. .-..|.-++.++++ ||++-+... + ..
T Consensus 111 Da~tlGNHEFD~G~~----~L~~~~~~a~fp~l~aNv~~~~~g~~~~~py~i~~~~G~kIgiiG~~t~~~~~~~~~~~~~ 186 (551)
T PRK09558 111 DAMAVGNHEFDNPLS----VLRKQEKWAKFPFLSANIYQKSTGERLFKPYAIFDRQGLKIAVIGLTTEDTAKIGNPEYFT 186 (551)
T ss_pred CEEcccccccCcCHH----HHHHhhccCCCCEEEEEEEECCCCCcccCCeEEEEECCEEEEEEEEeccccccccCCCCcC
Confidence 345789999965422 22222222122211 0011 11345557888855 555533111 1 00
Q ss_pred ---CHHHHHHHHHHHHhhcc-CCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccc
Q 012895 272 ---DSAQYKWLKADLAKINR-KKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAY 340 (454)
Q Consensus 272 ---~~~Q~~WL~~~L~~~~~-~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y 340 (454)
-....+-+++..++.+. ++.+.+|++.|......... .........+.+-+...+||++|.||.|..
T Consensus 187 ~~~f~d~~e~a~~~v~~Lk~~~~~D~IV~LsH~G~~~~~~~--~~~~~~d~~la~~~~~~~IDvIlgGHsH~~ 257 (551)
T PRK09558 187 DIEFRDPAEEAKKVIPELKQTEKPDVIIALTHMGHYDDGEH--GSNAPGDVEMARSLPAGGLDMIVGGHSQDP 257 (551)
T ss_pred CceECCHHHHHHHHHHHHHhccCCCEEEEEeccccccCCcc--CCCCccHHHHHHhCCccCceEEEeCCCCcc
Confidence 01122233333333331 36778999999886432211 000001122222222237999999999974
|
|
| >TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN | Back alignment and domain information |
|---|
Probab=97.94 E-value=0.00016 Score=76.36 Aligned_cols=174 Identities=16% Similarity=0.140 Sum_probs=86.4
Q ss_pred eEEEEEecCCCCCC------------------h----HHHHHHhhcCCC-CeEeecCccccCCCChhhHHHHhhhhhhhh
Q 012895 148 IEFAIVGDLGQTEW------------------T----NSTLDHVGSKDY-DVFLLPGDLSYADFQQPLWDSFGRLVEPYA 204 (454)
Q Consensus 148 ~~f~~igD~~~~~~------------------~----~~~l~~i~~~~p-d~vl~~GDl~y~~~~~~~~~~~~~~~~~l~ 204 (454)
++|++++|+|..-. . ...++++++..+ -++|.+||++...... .+..-...++-+.
T Consensus 1 ltILhtND~Hg~l~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~n~l~ldaGD~~~gs~~~-~~~~g~~~i~~~N 79 (550)
T TIGR01530 1 LSIIHINDHHSHLEPEELEIALAGEQLKAAIGGFAALNAEINKLRAESKNALVLHAGDAIIGTLYF-TLFGGRADAALMN 79 (550)
T ss_pred CEEEEEccccccccCcccccccCCCccccccCCHHHHHHHHHHHHhhCCCeEEEECCCCCCCccch-hhcCCHHHHHHHh
Confidence 47888889875310 0 123455554444 4778899998654321 1111111122222
Q ss_pred cCCCeeecCCCcccCCCCCCCcchhhhhhhhccCCCCC------CCC----CCCceEEEEeCe--EEEEEecccCC-C--
Q 012895 205 SSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEE------SGS----SSNLYYSFDIAG--AHIIMLGSYTD-F-- 269 (454)
Q Consensus 205 ~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~------~~~----~~~~~ys~~~g~--v~fi~Lds~~~-~-- 269 (454)
.---=+.++||||+..... .+..+.+....|.-. ... .-..|.-+++++ +-||+|.+... .
T Consensus 80 ~~g~Da~~lGNHEFd~G~~----~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~p~~i~~~~g~kIgiiGl~~~~~~~~~ 155 (550)
T TIGR01530 80 AAGFDFFTLGNHEFDAGNE----GLKEFLEPLEIPVLSANVIPDAASILHGKWKPSAIFERAGEKIAIIGLDTVKKTVES 155 (550)
T ss_pred ccCCCEEEeccccccCCHH----HHHHHHHhCCCCEEEEeeecCCCcccccCcCceEEEEECCeEEEEEEeecCcccccc
Confidence 2223456899999965432 233332222222210 000 113455677887 56777754210 0
Q ss_pred -CCC-----HHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHh-cCCcEEEecccccce
Q 012895 270 -DED-----SAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYN-ARVDVVFAGHVHAYE 341 (454)
Q Consensus 270 -~~~-----~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~-~~v~lvl~GH~H~y~ 341 (454)
... ....+=+++..++.+.++.+.+|++.|..... .. .+.++ .+||++|.||.|..-
T Consensus 156 ~~~~~~~~f~d~~~~~~~~v~~Lk~~g~D~II~lsH~g~~~------------d~---~la~~~~~iD~IigGHsH~~~ 219 (550)
T TIGR01530 156 SSPGKDIKFIDEIAAAQIAANALKQQGINKIILLSHAGFEK------------NC---EIAQKINDIDVIVSGDSHYLL 219 (550)
T ss_pred cCCCCceEECCHHHHHHHHHHHHHhCCCCEEEEEecCCcHH------------HH---HHHhcCCCCCEEEeCCCCccc
Confidence 010 11222233333333333567799999975310 01 22333 379999999999853
|
This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc. |
| >cd08162 MPP_PhoA_N Synechococcus sp | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.00018 Score=70.33 Aligned_cols=71 Identities=11% Similarity=0.011 Sum_probs=38.7
Q ss_pred eEEEEEecCCCCCC----h---HHHHHHhhcC----C-CCeEeecCccccCCCChhh----------HHHHhhhhhhhhc
Q 012895 148 IEFAIVGDLGQTEW----T---NSTLDHVGSK----D-YDVFLLPGDLSYADFQQPL----------WDSFGRLVEPYAS 205 (454)
Q Consensus 148 ~~f~~igD~~~~~~----~---~~~l~~i~~~----~-pd~vl~~GDl~y~~~~~~~----------~~~~~~~~~~l~~ 205 (454)
++|++.+|+|.... . ..+++++++. . .-++|.+||++........ .....+++..+.
T Consensus 1 l~IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g- 79 (313)
T cd08162 1 LQLLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALG- 79 (313)
T ss_pred CeEEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccC-
Confidence 57899999987532 1 1235555432 3 3478899999864332111 111112222221
Q ss_pred CCCeeecCCCcccCCC
Q 012895 206 SRPWMVTEGNHEIESI 221 (454)
Q Consensus 206 ~~P~~~v~GNHD~~~~ 221 (454)
. =+.++||||+...
T Consensus 80 -~-Da~tlGNHEFD~G 93 (313)
T cd08162 80 -V-QAIALGNHEFDLG 93 (313)
T ss_pred -C-cEEeccccccccC
Confidence 2 2458999999654
|
strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat |
| >cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.81 E-value=2.6e-05 Score=69.45 Aligned_cols=52 Identities=13% Similarity=0.161 Sum_probs=33.8
Q ss_pred HHhhcCCCCeEeecCccccCCCCh--hhHHHHhhhhhhhhcCCCeeecCCCcccC
Q 012895 167 DHVGSKDYDVFLLPGDLSYADFQQ--PLWDSFGRLVEPYASSRPWMVTEGNHEIE 219 (454)
Q Consensus 167 ~~i~~~~pd~vl~~GDl~y~~~~~--~~~~~~~~~~~~l~~~~P~~~v~GNHD~~ 219 (454)
+.+.+.+||.++++||+++..... ..+.... ........+|+++++||||..
T Consensus 35 ~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 35 RLIEEYGPERLIILGDLKHSFGGLSRQEFEEVA-FLRLLAKDVDVILIRGNHDGG 88 (172)
T ss_pred HHHHhcCCCEEEEeCcccccccccCHHHHHHHH-HHHhccCCCeEEEEcccCccc
Confidence 334578999999999999754321 1122211 222333458999999999983
|
This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro |
| >PHA02239 putative protein phosphatase | Back alignment and domain information |
|---|
Probab=97.73 E-value=5.5e-05 Score=70.70 Aligned_cols=69 Identities=13% Similarity=0.194 Sum_probs=44.6
Q ss_pred eEEEEEecCCCCCC-hHHHHHHhhcC--CCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCccc
Q 012895 148 IEFAIVGDLGQTEW-TNSTLDHVGSK--DYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEI 218 (454)
Q Consensus 148 ~~f~~igD~~~~~~-~~~~l~~i~~~--~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 218 (454)
+|++++||+|.... ..++++.+... ..|.++++||+++.+.... +.+..+++.+....++++++||||.
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~--~v~~~l~~~~~~~~~~~~l~GNHE~ 72 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSK--DVVNYIFDLMSNDDNVVTLLGNHDD 72 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChH--HHHHHHHHHhhcCCCeEEEECCcHH
Confidence 47899999996432 23455555432 3599999999998665422 2222222322233679999999997
|
|
| >KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=97.71 E-value=6.1e-05 Score=75.58 Aligned_cols=45 Identities=22% Similarity=0.197 Sum_probs=34.4
Q ss_pred CCCeEEEEEecCCCCCCh-------------HHHHHHhhcCCCCeEeecCccccCCCC
Q 012895 145 NFPIEFAIVGDLGQTEWT-------------NSTLDHVGSKDYDVFLLPGDLSYADFQ 189 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~~-------------~~~l~~i~~~~pd~vl~~GDl~y~~~~ 189 (454)
...+||++..|.|.+... .+++.-+.+.+.|+||..||++..+.+
T Consensus 11 entirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNkP 68 (646)
T KOG2310|consen 11 ENTIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENKP 68 (646)
T ss_pred ccceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCCc
Confidence 567999999999987531 234444458899999999999987655
|
|
| >TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related | Back alignment and domain information |
|---|
Probab=97.70 E-value=7.1e-05 Score=69.49 Aligned_cols=69 Identities=17% Similarity=0.263 Sum_probs=48.4
Q ss_pred eEEEEEecCCCCCCh--------------HHHHHHh----hcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCe
Q 012895 148 IEFAIVGDLGQTEWT--------------NSTLDHV----GSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPW 209 (454)
Q Consensus 148 ~~f~~igD~~~~~~~--------------~~~l~~i----~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~ 209 (454)
-+.++++|+|.+... .++++.+ ...+||.||++||+.+.......|..+.++++.+. .++
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~~--~~v 92 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVTF--RDL 92 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhcC--CcE
Confidence 457899999986421 1344444 46789999999999975544344555555555443 589
Q ss_pred eecCCCccc
Q 012895 210 MVTEGNHEI 218 (454)
Q Consensus 210 ~~v~GNHD~ 218 (454)
+.++||||.
T Consensus 93 ~~V~GNHD~ 101 (225)
T TIGR00024 93 ILIRGNHDA 101 (225)
T ss_pred EEECCCCCC
Confidence 999999997
|
Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal. |
| >PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.0019 Score=70.43 Aligned_cols=184 Identities=16% Similarity=0.096 Sum_probs=90.1
Q ss_pred CCCeEEEEEecCCCCCCh-----------------HHHHHHhhcCCCC-eEeecCccccCCCChhhHH-----------H
Q 012895 145 NFPIEFAIVGDLGQTEWT-----------------NSTLDHVGSKDYD-VFLLPGDLSYADFQQPLWD-----------S 195 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~~-----------------~~~l~~i~~~~pd-~vl~~GDl~y~~~~~~~~~-----------~ 195 (454)
...+||+..+|+|..-.. ...++++++..+. ++|..||++.......... .
T Consensus 113 ~~~LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P 192 (814)
T PRK11907 113 TVDVRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHP 192 (814)
T ss_pred ceEEEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcchH
Confidence 346999999999865210 1245555545454 6788999997544321100 0
Q ss_pred HhhhhhhhhcCCCeeecCCCcccCCCCCCCcchhhhhhhhccCCCCC-------CCC-CCCceEEEEe-----Ce-----
Q 012895 196 FGRLVEPYASSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEE-------SGS-SSNLYYSFDI-----AG----- 257 (454)
Q Consensus 196 ~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~-------~~~-~~~~~ys~~~-----g~----- 257 (454)
..+.|..+ --=..++||||+..... .+..+.+....|.-. .+. .-..|.-++. ++
T Consensus 193 ~i~amN~L---GyDA~tLGNHEFDyG~d----~L~~~l~~a~fPvl~ANV~~~~~~~~~~~PY~I~e~~~~d~~G~~~~v 265 (814)
T PRK11907 193 MYAALEAL---GFDAGTLGNHEFNYGLD----YLEKVIATANMPIVNANVLDPTTGDFLYTPYTIVTKTFTDTEGKKVTL 265 (814)
T ss_pred HHHHHhcc---CCCEEEechhhcccCHH----HHHHHHHhCCCCEEEeeeeecCCCCccCCCeEEEEEEEecCCCcccce
Confidence 11222222 22356899999965432 222222222223210 010 0122333433 33
Q ss_pred -EEEEEecccC--CCCC--------CHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHh
Q 012895 258 -AHIIMLGSYT--DFDE--------DSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYN 326 (454)
Q Consensus 258 -v~fi~Lds~~--~~~~--------~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~ 326 (454)
+-||++-+.. .|.. -.+-.+.+++...+.+.++.+.+|++.|..+.........++ .-..+.+-
T Consensus 266 KIGiIGlvtp~~~~w~~~~l~g~v~f~D~veaa~~~v~~Lr~~GaDvIIaLsH~G~~~d~~~~~~En-----~~~~LA~v 340 (814)
T PRK11907 266 NIGITGIVPPQILNWDKANLEGKVIVRDAVEAVRDIIPTMRAAGADIVLVLSHSGIGDDQYEVGEEN-----VGYQIASL 340 (814)
T ss_pred EEEEEEeCchhhhhcccccccCCeEECCHHHHHHHHHHHHHhcCCCEEEEEeCCCcccccccccccc-----hhhHHhcC
Confidence 4566663311 1110 022234444544444444678899999987643211111111 11122223
Q ss_pred cCCcEEEecccccc
Q 012895 327 ARVDVVFAGHVHAY 340 (454)
Q Consensus 327 ~~v~lvl~GH~H~y 340 (454)
-+||++|.||.|..
T Consensus 341 ~GIDaIvgGHsH~~ 354 (814)
T PRK11907 341 SGVDAVVTGHSHAE 354 (814)
T ss_pred CCCCEEEECCCCCc
Confidence 47999999999983
|
|
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.0004 Score=79.71 Aligned_cols=186 Identities=16% Similarity=0.142 Sum_probs=91.0
Q ss_pred CCeEEEEEecCCCCCCh-----------------HHHHHHhhcCCCCeEee-cCccccCCCChhhHH----H-----Hhh
Q 012895 146 FPIEFAIVGDLGQTEWT-----------------NSTLDHVGSKDYDVFLL-PGDLSYADFQQPLWD----S-----FGR 198 (454)
Q Consensus 146 ~~~~f~~igD~~~~~~~-----------------~~~l~~i~~~~pd~vl~-~GDl~y~~~~~~~~~----~-----~~~ 198 (454)
..++|+..+|+|..-.. ...++++++..++.+++ .||++...... .|. . ...
T Consensus 40 ~~l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~~~n~llld~GD~~qGs~l~-~~~~~~~~~~~~~~~~ 118 (1163)
T PRK09419 40 VNIQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKENPNTLLVDNGDLIQGNPLG-EYAVKDNILFKNKTHP 118 (1163)
T ss_pred eEEEEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHhCCCeEEEeCCCccCCChhh-hHHhhhccccCCCcCH
Confidence 35899999999864210 23456666667776555 99999765421 110 0 001
Q ss_pred hhhhhhcCCCeeecCCCcccCCCCCCCcchhhhhhhhccCCCCC------CCC-CCCceEEEEe---------CeEE--E
Q 012895 199 LVEPYASSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEE------SGS-SSNLYYSFDI---------AGAH--I 260 (454)
Q Consensus 199 ~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~------~~~-~~~~~ys~~~---------g~v~--f 260 (454)
.++.+..---=+.++||||+..... .+....+....|.-. .+. .-..|--++. ++++ |
T Consensus 119 ~i~~mN~lgyDa~~lGNHEFd~G~~----~L~~~~~~a~fp~l~aNv~~~~~~~~~~py~I~~~~~~~~~g~~~gvkIgi 194 (1163)
T PRK09419 119 MIKAMNALGYDAGTLGNHEFNYGLD----FLDGTIKGANFPVLNANVKYKNGKNVYTPYKIKEKTVTDENGKKQGVKVGY 194 (1163)
T ss_pred HHHHHhhcCccEEeecccccccCHH----HHHHHHhcCCCCEEEeeeecCCCCcccCCEEEEEEEeeccCCCCCCeEEEE
Confidence 1111211122356899999964322 222222222222210 111 0123444455 5544 5
Q ss_pred EEecccC--CCC----CC----HHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHh-cCC
Q 012895 261 IMLGSYT--DFD----ED----SAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYN-ARV 329 (454)
Q Consensus 261 i~Lds~~--~~~----~~----~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~-~~v 329 (454)
|++-+.. .|. .+ ..-.+=+++.+.+.++++++.+|++.|...-...... + ......++.++ -+|
T Consensus 195 iG~~~p~~~~~~~~~~~g~~~~~d~v~~~~~~v~~lk~~gaDvII~l~H~G~~~~~~~~-~----~en~~~~la~~~~gI 269 (1163)
T PRK09419 195 IGFVPPQIMTWDKKNLKGKVEVKNIVEEANKTIPEMKKGGADVIVALAHSGIESEYQSS-G----AEDSVYDLAEKTKGI 269 (1163)
T ss_pred EecCCcchhhcchhhccCcEEECCHHHHHHHHHHHHHhcCCCEEEEEeccCcCCCCCCC-C----cchHHHHHHHhCCCC
Confidence 5553311 011 01 1112223344444433467889999998864322111 1 11233344444 379
Q ss_pred cEEEecccccce
Q 012895 330 DVVFAGHVHAYE 341 (454)
Q Consensus 330 ~lvl~GH~H~y~ 341 (454)
|+++.||.|...
T Consensus 270 D~Il~GHsH~~~ 281 (1163)
T PRK09419 270 DAIVAGHQHGLF 281 (1163)
T ss_pred cEEEeCCCcccc
Confidence 999999999853
|
|
| >COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00076 Score=67.62 Aligned_cols=76 Identities=11% Similarity=0.218 Sum_probs=54.9
Q ss_pred CCCeEEEEEecCCCCCCh------HHHHHHhh-----cCCCCeEeecCccccCCCC-------------hhhHHHHhhhh
Q 012895 145 NFPIEFAIVGDLGQTEWT------NSTLDHVG-----SKDYDVFLLPGDLSYADFQ-------------QPLWDSFGRLV 200 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~~------~~~l~~i~-----~~~pd~vl~~GDl~y~~~~-------------~~~~~~~~~~~ 200 (454)
...++.++++|.|.+... ...++.+. +.+...++.+||+++.-+- ..+|+.+.+++
T Consensus 223 ~e~v~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L 302 (481)
T COG1311 223 DERVYVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFL 302 (481)
T ss_pred CcceEEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHH
Confidence 577899999999986432 23445553 3456789999999974321 34566777777
Q ss_pred hhhhcCCCeeecCCCcccCC
Q 012895 201 EPYASSRPWMVTEGNHEIES 220 (454)
Q Consensus 201 ~~l~~~~P~~~v~GNHD~~~ 220 (454)
..+...+-++..|||||...
T Consensus 303 ~~vp~~I~v~i~PGnhDa~r 322 (481)
T COG1311 303 DQVPEHIKVFIMPGNHDAVR 322 (481)
T ss_pred hhCCCCceEEEecCCCCccc
Confidence 77777788999999999853
|
|
| >PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.0017 Score=70.72 Aligned_cols=56 Identities=27% Similarity=0.293 Sum_probs=30.9
Q ss_pred HHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhc-CCcEEEecccccce
Q 012895 280 KADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNA-RVDVVFAGHVHAYE 341 (454)
Q Consensus 280 ~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~-~v~lvl~GH~H~y~ 341 (454)
++.+.+.+.++++.+|++.|..+-..... .. +...... +.+. +||++|.||.|..-
T Consensus 234 ~~~v~~Lr~~GaDvIIaLsH~G~~~d~~~---~~--~ena~~~-l~~v~gID~IlgGHsH~~~ 290 (780)
T PRK09418 234 KKMVPKMKAEGADVIVALAHSGVDKSGYN---VG--MENASYY-LTEVPGVDAVLMGHSHTEV 290 (780)
T ss_pred HHHHHHHHhcCCCEEEEEeccCccccccc---cc--chhhhHH-HhcCCCCCEEEECCCCCcc
Confidence 33333333336778999999875432111 11 1011111 3443 79999999999853
|
|
| >PRK00166 apaH diadenosine tetraphosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00019 Score=68.66 Aligned_cols=66 Identities=20% Similarity=0.264 Sum_probs=45.2
Q ss_pred eEEEEEecCCCCCCh-HHHHHHhh-cCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCccc
Q 012895 148 IEFAIVGDLGQTEWT-NSTLDHVG-SKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEI 218 (454)
Q Consensus 148 ~~f~~igD~~~~~~~-~~~l~~i~-~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 218 (454)
+++++|||+|..... ..+++.+. ..+.|.++++||+++.+.... ...+.+..+ ..+++++.||||.
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s~---~vl~~l~~l--~~~~~~VlGNHD~ 68 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDSL---EVLRFVKSL--GDSAVTVLGNHDL 68 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCHH---HHHHHHHhc--CCCeEEEecChhH
Confidence 468999999976432 34566664 357899999999998665422 222333333 2468899999998
|
|
| >COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0023 Score=54.26 Aligned_cols=66 Identities=20% Similarity=0.198 Sum_probs=41.2
Q ss_pred EEEEEecCCCCCCh--------------HHHHHHhh-cCCC-CeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeec
Q 012895 149 EFAIVGDLGQTEWT--------------NSTLDHVG-SKDY-DVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVT 212 (454)
Q Consensus 149 ~f~~igD~~~~~~~--------------~~~l~~i~-~~~p-d~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v 212 (454)
.+-++||+|.+... ..++...+ --+| |.+.++||++...... ..+..++++|... ...+
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~---~~a~~IlerLnGr--khlv 79 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRE---RAAGLILERLNGR--KHLV 79 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccchh---hHHHHHHHHcCCc--EEEe
Confidence 35678999876431 22444443 2344 6788999998654432 2345566666544 4789
Q ss_pred CCCcccC
Q 012895 213 EGNHEIE 219 (454)
Q Consensus 213 ~GNHD~~ 219 (454)
+||||-.
T Consensus 80 ~GNhDk~ 86 (186)
T COG4186 80 PGNHDKC 86 (186)
T ss_pred eCCCCCC
Confidence 9999973
|
|
| >KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.0012 Score=63.39 Aligned_cols=173 Identities=21% Similarity=0.255 Sum_probs=97.2
Q ss_pred eEEEEEecCCCCCCh-HHHHHHhh---cCCCCeEeecCccccCCC--------ChhhHHHHhhhhhh----hhcCCCeee
Q 012895 148 IEFAIVGDLGQTEWT-NSTLDHVG---SKDYDVFLLPGDLSYADF--------QQPLWDSFGRLVEP----YASSRPWMV 211 (454)
Q Consensus 148 ~~f~~igD~~~~~~~-~~~l~~i~---~~~pd~vl~~GDl~y~~~--------~~~~~~~~~~~~~~----l~~~~P~~~ 211 (454)
+|+++-|++|..-+. .+++..+. ..++|++|++||+---.. ....|..+..+.+- +.+.+|.++
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 589999999875332 23444554 358999999999942111 12344443333332 334588899
Q ss_pred cCCCcccCCCCCCCcchhhhhhhhccCCCCCCCCCCCceE-----EEEeCeEEEEEecc---cCCCCC-------CH-H-
Q 012895 212 TEGNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYY-----SFDIAGAHIIMLGS---YTDFDE-------DS-A- 274 (454)
Q Consensus 212 v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~y-----s~~~g~v~fi~Lds---~~~~~~-------~~-~- 274 (454)
+=||||..+ |. +.+|+.+-- ..+.|| ...+|++|+-+|.. ..+|.. .. .
T Consensus 81 IGGNHEAsn-----------yL--~eLpyGGwV-ApNIyYlG~agVv~~~gvRIggiSGI~k~~dy~kgh~E~ppyn~st 146 (456)
T KOG2863|consen 81 IGGNHEASN-----------YL--QELPYGGWV-APNIYYLGYAGVVNFGGVRIGGISGIYKEHDYRKGHFEWPPYNNST 146 (456)
T ss_pred ecCchHHHH-----------HH--HhcccCcee-ccceEEeeecceEEECCEEEeeccchhhhhhcccCCCCCCCccchh
Confidence 999999832 11 233442111 124555 36788999988875 112211 00 0
Q ss_pred ------HHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcH-----------------HHHHHHHHHHHhcCCcE
Q 012895 275 ------QYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGE-----------------SMRNSMEELLYNARVDV 331 (454)
Q Consensus 275 ------Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~-----------------~~~~~l~~ll~~~~v~l 331 (454)
-+..=...|... +.|.-|.+.|.-+-.. .+.++.. -....++++|++.+...
T Consensus 147 iRsiYHvR~~dV~~Lkql---k~piDIfLSHDWP~GI--~~yGd~~~LLr~KPFFrqeie~~~LGSp~~~eLL~~LkP~y 221 (456)
T KOG2863|consen 147 IRSIYHVRISDVAKLKQL---KHPIDIFLSHDWPRGI--YYYGDKKQLLRLKPFFRQEIEEGKLGSPALEELLEDLKPQY 221 (456)
T ss_pred hhhhhhhhhhhhHHHHhh---cCcceEEeecCCCcch--hhcCCHHHHHhcCcHHHHHHhcCCcCChHHHHHHHHhCcch
Confidence 011111233344 3344588888643221 1222211 11357888999999999
Q ss_pred EEeccccc
Q 012895 332 VFAGHVHA 339 (454)
Q Consensus 332 vl~GH~H~ 339 (454)
+|+.|.|.
T Consensus 222 WfsAHLH~ 229 (456)
T KOG2863|consen 222 WFSAHLHV 229 (456)
T ss_pred hhhhhHhh
Confidence 99999997
|
|
| >cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.00027 Score=66.29 Aligned_cols=68 Identities=22% Similarity=0.243 Sum_probs=45.3
Q ss_pred eEEEEEecCCCCCC-hHHHHHHhhc----------CCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCc
Q 012895 148 IEFAIVGDLGQTEW-TNSTLDHVGS----------KDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNH 216 (454)
Q Consensus 148 ~~f~~igD~~~~~~-~~~~l~~i~~----------~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNH 216 (454)
.|++++||+|.... ..++++.+.. .+.|.++++||+++.+... ....+++..+.....++++.|||
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s---~evl~~l~~l~~~~~~~~v~GNH 77 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDS---PEVLRLVMSMVAAGAALCVPGNH 77 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCH---HHHHHHHHHHhhCCcEEEEECCc
Confidence 37999999997643 2446666531 1368999999999866532 22334444443334688999999
Q ss_pred cc
Q 012895 217 EI 218 (454)
Q Consensus 217 D~ 218 (454)
|.
T Consensus 78 E~ 79 (234)
T cd07423 78 DN 79 (234)
T ss_pred HH
Confidence 97
|
PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp |
| >cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.00034 Score=61.99 Aligned_cols=63 Identities=14% Similarity=0.121 Sum_probs=40.3
Q ss_pred EEEecCCCCCCh----------------HHHHHHhhc--CCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeec
Q 012895 151 AIVGDLGQTEWT----------------NSTLDHVGS--KDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVT 212 (454)
Q Consensus 151 ~~igD~~~~~~~----------------~~~l~~i~~--~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v 212 (454)
.+++|+|.+... ..+++.+.+ .++|.|+++||++........ .+.++.+ ..|++.+
T Consensus 2 ~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~~~~~----~~~l~~~--~~~~~~v 75 (168)
T cd07390 2 YFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGKAGTE----LELLSRL--NGRKHLI 75 (168)
T ss_pred eEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCChHHH----HHHHHhC--CCCeEEE
Confidence 468888876432 123444433 378999999999976543221 2233332 2689999
Q ss_pred CCCcccC
Q 012895 213 EGNHEIE 219 (454)
Q Consensus 213 ~GNHD~~ 219 (454)
+||||..
T Consensus 76 ~GNHD~~ 82 (168)
T cd07390 76 KGNHDSS 82 (168)
T ss_pred eCCCCch
Confidence 9999973
|
This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d |
| >PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.00037 Score=65.75 Aligned_cols=68 Identities=18% Similarity=0.236 Sum_probs=43.9
Q ss_pred eEEEEEecCCCCCCh-HHHHHHhhc---------CCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcc
Q 012895 148 IEFAIVGDLGQTEWT-NSTLDHVGS---------KDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHE 217 (454)
Q Consensus 148 ~~f~~igD~~~~~~~-~~~l~~i~~---------~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD 217 (454)
+|+.++||+|..... .++++.+.. ..-|.++++||+++.+.... ...+.+..+.....++++.||||
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~---~vl~~~~~~~~~~~~~~l~GNHE 77 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSL---RMIEIVWELVEKKAAYYVPGNHC 77 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChH---HHHHHHHHHhhCCCEEEEeCccH
Confidence 478999999975432 345555432 23478999999998765432 12233333333457899999999
Q ss_pred c
Q 012895 218 I 218 (454)
Q Consensus 218 ~ 218 (454)
.
T Consensus 78 ~ 78 (245)
T PRK13625 78 N 78 (245)
T ss_pred H
Confidence 6
|
|
| >cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0037 Score=58.94 Aligned_cols=133 Identities=14% Similarity=0.173 Sum_probs=74.4
Q ss_pred EEEEecCCCCCChH------HHHHHhh-----------cCCCCeEeecCccccCCCC-------------------hhhH
Q 012895 150 FAIVGDLGQTEWTN------STLDHVG-----------SKDYDVFLLPGDLSYADFQ-------------------QPLW 193 (454)
Q Consensus 150 f~~igD~~~~~~~~------~~l~~i~-----------~~~pd~vl~~GDl~y~~~~-------------------~~~~ 193 (454)
+++++|+|.+.... ..++.+. ..+..-+|++||.+..... ...+
T Consensus 2 i~~vSgL~ig~~~~~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (257)
T cd07387 2 IALVSGLGLGGNAESSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTKARYLTKKSSAASVEAV 81 (257)
T ss_pred EEEEcccccCCCccchHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccchhhhhhccccccchhhHHHH
Confidence 67889998765431 2233332 1234569999999975432 2234
Q ss_pred HHHhhhhhhhhcCCCeeecCCCcccCCCCCCCcchhhhhhhhccCCCC-CCCCCCCceEEEEeCeEEEEEecccC-----
Q 012895 194 DSFGRLVEPYASSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYE-ESGSSSNLYYSFDIAGAHIIMLGSYT----- 267 (454)
Q Consensus 194 ~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~ys~~~g~v~fi~Lds~~----- 267 (454)
+.+.+++..+...+|+..+|||||-..... ++..+. ...|+.... .+-..-..-|.|++++++|++.....
T Consensus 82 ~~ld~~l~~l~~~i~V~imPG~~Dp~~~~l-PQqplh--~~lfp~s~~~~~~~~vtNP~~~~i~g~~vLgtsGqni~Di~ 158 (257)
T cd07387 82 KELDNFLSQLASSVPVDLMPGEFDPANHSL-PQQPLH--RCLFPKSSNYSTLNLVTNPYEFSIDGVRVLGTSGQNVDDIL 158 (257)
T ss_pred HHHHHHHHhhhcCCeEEECCCCCCcccccC-CCCCCC--HHHhhcccccCCcEEeCCCeEEEECCEEEEEECCCCHHHHH
Confidence 556677888888899999999999854321 111111 011110000 00000122356899999999987532
Q ss_pred CCCCCHHHHHHHHHHHHh
Q 012895 268 DFDEDSAQYKWLKADLAK 285 (454)
Q Consensus 268 ~~~~~~~Q~~WL~~~L~~ 285 (454)
.+...+.-++.|+..|+-
T Consensus 159 ky~~~~~~l~~me~~L~w 176 (257)
T cd07387 159 KYSSLESRLDILERTLKW 176 (257)
T ss_pred HhCCCCCHHHHHHHHHHh
Confidence 122334446667776653
|
PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily |
| >TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0058 Score=65.50 Aligned_cols=45 Identities=22% Similarity=0.229 Sum_probs=27.1
Q ss_pred CCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHh-cCCcEEEecccccc
Q 012895 290 KTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYN-ARVDVVFAGHVHAY 340 (454)
Q Consensus 290 ~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~-~~v~lvl~GH~H~y 340 (454)
+.+.+|++.|...-....... . +.....+.+ -+||+++.||.|..
T Consensus 195 gaDvII~LsH~G~~~d~~~~~--~----en~~~~l~~v~gID~Il~GHsH~~ 240 (626)
T TIGR01390 195 GADIIVALAHSGISADPYQPG--A----ENSAYYLTKVPGIDAVLFGHSHAV 240 (626)
T ss_pred CCCEEEEEeccCcCCCccccc--c----chHHHHHhcCCCCCEEEcCCCCcc
Confidence 577899999987643211001 1 111112344 37999999999983
|
2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a |
| >PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0066 Score=65.28 Aligned_cols=58 Identities=19% Similarity=0.239 Sum_probs=32.3
Q ss_pred HHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHh-cCCcEEEecccccc
Q 012895 277 KWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYN-ARVDVVFAGHVHAY 340 (454)
Q Consensus 277 ~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~-~~v~lvl~GH~H~y 340 (454)
+-+++...+.+.++.+.+|++.|..+-........+ +.... +.+ -+||+++.||.|..
T Consensus 205 e~a~~~v~~Lk~~gaDvII~LsH~G~~~d~~~~~ae-----n~~~~-l~~v~gID~Il~GHsH~~ 263 (649)
T PRK09420 205 ETARKYVPEMKEKGADIVVAIPHSGISADPYKAMAE-----NSVYY-LSEVPGIDAIMFGHSHAV 263 (649)
T ss_pred HHHHHHHHHHHHcCCCEEEEEecCCcCCCCcccccc-----chhHH-HhcCCCCCEEEeCCCCcc
Confidence 334444444443367889999998763221100111 11112 234 37999999999984
|
|
| >cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.00052 Score=63.71 Aligned_cols=66 Identities=18% Similarity=0.254 Sum_probs=43.2
Q ss_pred EEEEecCCCCCCh-HHHHHHhhcC--------CCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCccc
Q 012895 150 FAIVGDLGQTEWT-NSTLDHVGSK--------DYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEI 218 (454)
Q Consensus 150 f~~igD~~~~~~~-~~~l~~i~~~--------~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 218 (454)
+.+|||+|..... .++++.+... ..|.++++||+++.+.... ...+.+..+...-.++++.||||.
T Consensus 1 ~~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~---~vl~~l~~l~~~~~~~~l~GNHE~ 75 (222)
T cd07413 1 YDFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIR---ELLEIVKSMVDAGHALAVMGNHEF 75 (222)
T ss_pred CEEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHH---HHHHHHHHhhcCCCEEEEEccCcH
Confidence 4689999976432 4456666321 4689999999998765432 223333333333468889999997
|
PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of |
| >COG1692 Calcineurin-like phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.06 Score=49.50 Aligned_cols=186 Identities=23% Similarity=0.287 Sum_probs=100.5
Q ss_pred eEEEEEecCCCCCChHHH----HHHhh-cCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCC
Q 012895 148 IEFAIVGDLGQTEWTNST----LDHVG-SKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIP 222 (454)
Q Consensus 148 ~~f~~igD~~~~~~~~~~----l~~i~-~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~ 222 (454)
+|++++||+-.. ..+.+ |..++ +.++||||..|-++-.+- .-.|+.+.++++ ..+-+ .+.|||=+....
T Consensus 1 mriLfiGDvvGk-~Gr~~v~~~Lp~lk~kyk~dfvI~N~ENaa~G~-Git~k~y~~l~~---~G~dv-iT~GNH~wd~~e 74 (266)
T COG1692 1 MRILFIGDVVGK-PGRKAVKEHLPQLKSKYKIDFVIVNGENAAGGF-GITEKIYKELLE---AGADV-ITLGNHTWDQKE 74 (266)
T ss_pred CeEEEEecccCc-chHHHHHHHhHHHHHhhcCcEEEEcCccccCCc-CCCHHHHHHHHH---hCCCE-EecccccccchH
Confidence 589999998433 23333 33343 568999999999985432 223444444333 22443 599999985321
Q ss_pred CCCcchhhhhhhhccCCCCCC-CCCCCceEEEEeCeEEEEEecc--cCCCC-CCHHHHHHHHHHHHhhccCCCCeEEEEE
Q 012895 223 IILPHAFKAYNARWLMPYEES-GSSSNLYYSFDIAGAHIIMLGS--YTDFD-EDSAQYKWLKADLAKINRKKTPWIFVLL 298 (454)
Q Consensus 223 ~~~~~~~~~~~~~~~~p~~~~-~~~~~~~ys~~~g~v~fi~Lds--~~~~~-~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~ 298 (454)
.. .+-.-..++--|.|-+ +..+..|+-|...+..+.+.|- ..... .-..-..-+++.|.+.+. +++.+||-+
T Consensus 75 i~---~~i~~~~~ilRP~N~p~~~~G~G~~~f~~ng~ki~V~Nl~Grv~m~~~~d~PF~~~d~l~~~~~~-~~~~iiVDF 150 (266)
T COG1692 75 IL---DFIDNADRILRPANYPDGTPGKGSRIFKINGKKLAVINLMGRVFMPPALDNPFKAADKLLDEIKL-GTDLIIVDF 150 (266)
T ss_pred HH---HHhhcccceeccCCCCCCCCcceEEEEEeCCcEEEEEEeeccccCccccCCHHHHHHHHHHhCcc-CCceEEEEc
Confidence 10 1111112222343321 2345667778887766555543 22111 122334456666666654 456788888
Q ss_pred ccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCCcCCCCcEEEE
Q 012895 299 HAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYIT 360 (454)
Q Consensus 299 H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~ 360 (454)
|.---+ ..++|- ++-+-+|.+|+-=|+|.-..-.++- ++|+.|++
T Consensus 151 HAEtTS-----------EK~a~g-~yldGrvsavvGTHTHV~TaD~rIL-----~~GTayiT 195 (266)
T COG1692 151 HAETTS-----------EKNAFG-WYLDGRVSAVVGTHTHVPTADERIL-----PKGTAYIT 195 (266)
T ss_pred cccchh-----------hhhhhh-eEEcCeEEEEEeccCccccccceec-----CCCcEEEe
Confidence 864211 111111 1223468899999999843222222 57888886
|
|
| >cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.00077 Score=64.24 Aligned_cols=67 Identities=15% Similarity=0.111 Sum_probs=43.1
Q ss_pred EEEEEecCCCCCCh-HHHHHHhhc------CCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCC---CeeecCCCccc
Q 012895 149 EFAIVGDLGQTEWT-NSTLDHVGS------KDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSR---PWMVTEGNHEI 218 (454)
Q Consensus 149 ~f~~igD~~~~~~~-~~~l~~i~~------~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~---P~~~v~GNHD~ 218 (454)
++.++||+|..... ..+++.+.. ...+.+|++||+++.+..... ..+++..+.... .++++.||||.
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~e---Vld~L~~l~~~~~~~~vv~LrGNHE~ 79 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRK---VIDFLISLPEKHPKQRHVFLCGNHDF 79 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHH---HHHHHHHhhhcccccceEEEecCChH
Confidence 68999999976442 445555532 235689999999987654322 223333333222 47889999995
|
Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol |
| >cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.02 Score=53.76 Aligned_cols=62 Identities=21% Similarity=0.257 Sum_probs=40.0
Q ss_pred HHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeee
Q 012895 277 KWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFT 344 (454)
Q Consensus 277 ~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~ 344 (454)
+-+++.+++.+. +.+++|++.|-..-.. .........+...+...++|+|+.||.|..+-..
T Consensus 162 ~~~~~~i~~lr~-~~D~vIv~~H~G~e~~-----~~p~~~~~~la~~l~~~G~D~IiG~H~Hv~q~~E 223 (239)
T cd07381 162 ERIAADIAEAKK-KADIVIVSLHWGVEYS-----YYPTPEQRELARALIDAGADLVIGHHPHVLQGIE 223 (239)
T ss_pred HHHHHHHHHHhh-cCCEEEEEecCcccCC-----CCCCHHHHHHHHHHHHCCCCEEEcCCCCcCCCeE
Confidence 446666666554 3788999999653111 1111233456666667799999999999876544
|
CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal |
| >cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0011 Score=61.47 Aligned_cols=66 Identities=18% Similarity=0.179 Sum_probs=42.9
Q ss_pred EEEecCCCCCCh-HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhc-CCCeeecCCCcccC
Q 012895 151 AIVGDLGQTEWT-NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYAS-SRPWMVTEGNHEIE 219 (454)
Q Consensus 151 ~~igD~~~~~~~-~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~-~~P~~~v~GNHD~~ 219 (454)
.++||+|..... .++++.+.....|.+|++||+++.+.... ...+.+..+.. ..+++.+.||||..
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdrg~~~~---~~l~~l~~~~~~~~~~~~l~GNHe~~ 68 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDRGPDSV---EVIDLLLALKILPDNVILLRGNHEDM 68 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCCCCCcH---HHHHHHHHhcCCCCcEEEEccCchhh
Confidence 379999965322 34555565668999999999998664321 22222222221 24799999999984
|
The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate |
| >PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes [] | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0079 Score=45.92 Aligned_cols=70 Identities=23% Similarity=0.339 Sum_probs=46.9
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCC----CCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDK----EAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~----~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
+|..+++.....+++.|.|..... ...-.|+|.......... ... .+.-...+.|++|+|+|.|.+
T Consensus 2 ~P~~l~v~~~~~~sv~v~W~~~~~~~~~~~~y~v~~~~~~~~~~~~------~~~----~~~~~~~~~i~~L~p~t~Y~~ 71 (85)
T PF00041_consen 2 APENLSVSNISPTSVTVSWKPPSSGNGPITGYRVEYRSVNSTSDWQ------EVT----VPGNETSYTITGLQPGTTYEF 71 (85)
T ss_dssp SSEEEEEEEECSSEEEEEEEESSSTSSSESEEEEEEEETTSSSEEE------EEE----EETTSSEEEEESCCTTSEEEE
T ss_pred cCcCeEEEECCCCEEEEEEECCCCCCCCeeEEEEEEEecccceeee------eee----eeeeeeeeeeccCCCCCEEEE
Confidence 578888988889999999999941 123466676554332011 111 111233678899999999999
Q ss_pred EeCc
Q 012895 129 RCGG 132 (454)
Q Consensus 129 rv~~ 132 (454)
||..
T Consensus 72 ~v~a 75 (85)
T PF00041_consen 72 RVRA 75 (85)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9874
|
They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A .... |
| >cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0019 Score=61.19 Aligned_cols=63 Identities=21% Similarity=0.233 Sum_probs=43.3
Q ss_pred EEEecCCCCCC-hHHHHHHhh-cCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCccc
Q 012895 151 AIVGDLGQTEW-TNSTLDHVG-SKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEI 218 (454)
Q Consensus 151 ~~igD~~~~~~-~~~~l~~i~-~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 218 (454)
.+|||+|.... .+++++.+. ..+.|.++++||+++.+.... +..+++..+. ..+..+.||||.
T Consensus 2 yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s~---evl~~l~~l~--~~v~~VlGNHD~ 66 (257)
T cd07422 2 YAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDSL---ETLRFVKSLG--DSAKTVLGNHDL 66 (257)
T ss_pred EEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCHH---HHHHHHHhcC--CCeEEEcCCchH
Confidence 58999997643 245666665 346899999999998665432 2233333332 368899999998
|
ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa |
| >COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion] | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0015 Score=60.72 Aligned_cols=168 Identities=21% Similarity=0.308 Sum_probs=97.1
Q ss_pred CCCeEeecCccccCCCCh-------hhHHHHh----hhhhhhhcCCCeeecCCCcccCCCCCCC-----cchhhhhhhh-
Q 012895 173 DYDVFLLPGDLSYADFQQ-------PLWDSFG----RLVEPYASSRPWMVTEGNHEIESIPIIL-----PHAFKAYNAR- 235 (454)
Q Consensus 173 ~pd~vl~~GDl~y~~~~~-------~~~~~~~----~~~~~l~~~~P~~~v~GNHD~~~~~~~~-----~~~~~~~~~~- 235 (454)
-|--++..||++++.+.+ .++..+. .-+.++.-..|+|.-.||||...+.... .+..+.|-+.
T Consensus 126 ~plGlV~ggDitddgggq~~qprEg~ql~qf~~RYsq~vG~~h~H~PvYvGlgnhdldq~gpph~~DWyRrElrdyve~~ 205 (392)
T COG5555 126 CPLGLVEGGDITDDGGGQSFQPREGNQLKQFELRYSQDVGNIHMHYPVYVGLGNHDLDQKGPPHSLDWYRRELRDYVENY 205 (392)
T ss_pred CceeEEeecceeccCCCcccCccccchhhchHhhhccCCCCceeeeeeEeccCchhhcccCCCCchhHHHHHHHHHHHhh
Confidence 345577788998866541 1111111 1112222348999999999997543210 1112222222
Q ss_pred ------ccCCCCC-CCCCCCceEEEEeCeEEEEEecccCCC-CC-CHHHHHHHHHHHHhhccCCCCeEEEEEccccc--c
Q 012895 236 ------WLMPYEE-SGSSSNLYYSFDIAGAHIIMLGSYTDF-DE-DSAQYKWLKADLAKINRKKTPWIFVLLHAPWY--N 304 (454)
Q Consensus 236 ------~~~p~~~-~~~~~~~~ys~~~g~v~fi~Lds~~~~-~~-~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~--~ 304 (454)
|..|... .-......||+++|+++.+-+-....- .. ...-+-||+.+|........+ ++++.|.-+- +
T Consensus 206 Hr~~vf~Kppvp~atYd~l~d~ySwdwgglhlvh~hrf~Gd~~~ga~sslpwlk~dl~~~aadgrp-v~LfqhyGwdtfs 284 (392)
T COG5555 206 HRSDVFWKPPVPPATYDQLKDRYSWDWGGLHLVHYHRFIGDAEPGANSSLPWLKVDLIYSAADGRP-VYLFQHYGWDTFS 284 (392)
T ss_pred cCcCcccCCCCCcccccccchheeccccceeEEEEeeeccccCCCccccCcceeccceeeccCCCc-eeehhhhCcccee
Confidence 2222111 111235578999999988877653221 11 133467999999876554555 8999998652 2
Q ss_pred CCCC--------CCCC------cHHHHHHHHHHHHhcCCcEEEecccccce
Q 012895 305 TNTA--------HQGE------GESMRNSMEELLYNARVDVVFAGHVHAYE 341 (454)
Q Consensus 305 ~~~~--------~~~~------~~~~~~~l~~ll~~~~v~lvl~GH~H~y~ 341 (454)
+..+ ..+. ....|..|...++-|+|...+.||-|.+.
T Consensus 285 teawdpAsrT~Dd~Gsgaphww~a~er~all~~lqGYNvvg~fhGhkhd~~ 335 (392)
T COG5555 285 TEAWDPASRTLDDTGSGAPHWWPAPERGALLFFLQGYNVVGTFHGHKHDFN 335 (392)
T ss_pred ccccCchhcccccCCCCCCCCCCCCCcchHHHhhcCceeEEeccccccccc
Confidence 2111 0111 12467889999999999999999999853
|
|
| >TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0023 Score=60.89 Aligned_cols=65 Identities=23% Similarity=0.263 Sum_probs=44.1
Q ss_pred EEEEEecCCCCCC-hHHHHHHhh-cCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCccc
Q 012895 149 EFAIVGDLGQTEW-TNSTLDHVG-SKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEI 218 (454)
Q Consensus 149 ~f~~igD~~~~~~-~~~~l~~i~-~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 218 (454)
+..+|||+|.... ...+++++. ....|-++++||+++.+.... ...+++..+. ..+..+.||||.
T Consensus 2 ~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~sl---evL~~l~~l~--~~~~~VlGNHD~ 68 (279)
T TIGR00668 2 ATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGSL---EVLRYVKSLG--DAVRLVLGNHDL 68 (279)
T ss_pred cEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHH---HHHHHHHhcC--CCeEEEEChhHH
Confidence 5679999997643 356677775 456799999999998765432 1223333332 235689999997
|
Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. |
| >PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.078 Score=50.14 Aligned_cols=64 Identities=17% Similarity=0.245 Sum_probs=44.8
Q ss_pred HHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeee
Q 012895 275 QYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFT 344 (454)
Q Consensus 275 Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~ 344 (454)
+.+.+.+++++.++ +.+++||+.|--.- +........+++...+-+.++|+|+.+|.|..+-..
T Consensus 169 ~~~~i~~~i~~~r~-~~D~vIv~~HwG~e-----~~~~p~~~q~~~a~~lidaGaDiIiG~HpHv~q~~E 232 (250)
T PF09587_consen 169 GIERIKEDIREARK-KADVVIVSLHWGIE-----YENYPTPEQRELARALIDAGADIIIGHHPHVIQPVE 232 (250)
T ss_pred hHHHHHHHHHHHhc-CCCEEEEEeccCCC-----CCCCCCHHHHHHHHHHHHcCCCEEEeCCCCcccceE
Confidence 45788888888873 78899999997421 111112344556666667899999999999977655
|
Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein []. |
| >COG1407 Predicted ICC-like phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.0055 Score=56.43 Aligned_cols=72 Identities=17% Similarity=0.137 Sum_probs=48.9
Q ss_pred CeEEEEEecCCCCCCh--------------H---HHHH-HhhcCCCCeEeecCccccCCCC--hhhHHHHhhhhhhhhcC
Q 012895 147 PIEFAIVGDLGQTEWT--------------N---STLD-HVGSKDYDVFLLPGDLSYADFQ--QPLWDSFGRLVEPYASS 206 (454)
Q Consensus 147 ~~~f~~igD~~~~~~~--------------~---~~l~-~i~~~~pd~vl~~GDl~y~~~~--~~~~~~~~~~~~~l~~~ 206 (454)
.-+.++++|+|.+... . ..++ -+...+|+-+|++||+-.+-.. ..+|.....+++.+...
T Consensus 19 ~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~~ 98 (235)
T COG1407 19 LGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDER 98 (235)
T ss_pred cCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhccC
Confidence 3578999999987431 1 2333 2357899999999999875543 34455554555544432
Q ss_pred CCeeecCCCcccC
Q 012895 207 RPWMVTEGNHEIE 219 (454)
Q Consensus 207 ~P~~~v~GNHD~~ 219 (454)
-++++.||||-.
T Consensus 99 -evi~i~GNHD~~ 110 (235)
T COG1407 99 -EVIIIRGNHDNG 110 (235)
T ss_pred -cEEEEeccCCCc
Confidence 599999999984
|
|
| >smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.067 Score=50.19 Aligned_cols=62 Identities=24% Similarity=0.288 Sum_probs=39.0
Q ss_pred HHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeee
Q 012895 277 KWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFT 344 (454)
Q Consensus 277 ~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~ 344 (454)
+-+++.+++.+. +.+++|++.|-..-... ........+...+.+.++|+|+.||.|..+...
T Consensus 160 ~~i~~~i~~lr~-~~D~vIv~~H~G~e~~~-----~p~~~~~~~A~~l~~~G~DvIiG~H~H~~~~~e 221 (239)
T smart00854 160 EKILADIARARK-KADVVIVSLHWGVEYQY-----EPTDEQRELAHALIDAGADVVIGHHPHVLQPIE 221 (239)
T ss_pred HHHHHHHHHHhc-cCCEEEEEecCccccCC-----CCCHHHHHHHHHHHHcCCCEEEcCCCCcCCceE
Confidence 335555555544 57889999997642111 111223455555556799999999999977554
|
This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein. |
| >PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.048 Score=50.73 Aligned_cols=177 Identities=21% Similarity=0.281 Sum_probs=85.8
Q ss_pred EEEecCCCCCChHH----HHHHhh-cCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCCCC
Q 012895 151 AIVGDLGQTEWTNS----TLDHVG-SKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPIIL 225 (454)
Q Consensus 151 ~~igD~~~~~~~~~----~l~~i~-~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~ 225 (454)
+++||.-.. ...+ .|..++ +.++||||..|.++-.+.- -....+.+++ ...+-+ .+.|||=+...
T Consensus 1 LfiGDIvG~-~Gr~~v~~~Lp~L~~~~~~DfVIaNgENaa~G~G-it~~~~~~L~---~~GvDv-iT~GNH~wdkk---- 70 (253)
T PF13277_consen 1 LFIGDIVGK-PGRRAVKEHLPELKEEYGIDFVIANGENAAGGFG-ITPKIAEELF---KAGVDV-ITMGNHIWDKK---- 70 (253)
T ss_dssp EEE-EBBCH-HHHHHHHHHHHHHGG--G-SEEEEE-TTTTTTSS---HHHHHHHH---HHT-SE-EE--TTTTSST----
T ss_pred CeEEecCCH-HHHHHHHHHHHHHHhhcCCCEEEECCcccCCCCC-CCHHHHHHHH---hcCCCE-EecCcccccCc----
Confidence 478887322 2233 344443 6799999999999854322 1111222221 122555 48999998532
Q ss_pred cchhhhhhh---hccCCCCCC-CCCCCceEEEEeCeEEEEEeccc--CCCCCCHHHHHHHHHHHHhhccCCCCeEEEEEc
Q 012895 226 PHAFKAYNA---RWLMPYEES-GSSSNLYYSFDIAGAHIIMLGSY--TDFDEDSAQYKWLKADLAKINRKKTPWIFVLLH 299 (454)
Q Consensus 226 ~~~~~~~~~---~~~~p~~~~-~~~~~~~ys~~~g~v~fi~Lds~--~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H 299 (454)
....|.. +.--|.|-+ +.++..|..++.++.++-++|-. ........-...+++.|++... +.+.+||=.|
T Consensus 71 --ei~~~i~~~~~ilRPaN~p~~~pG~G~~i~~~~g~kv~ViNl~Gr~fm~~~~~PF~~~d~~l~~l~~-~~~~iiVDFH 147 (253)
T PF13277_consen 71 --EIFDFIDKEPRILRPANYPPGTPGRGYRIFEKNGKKVAVINLMGRVFMPPIDCPFRAADRLLEELKE-ETDIIIVDFH 147 (253)
T ss_dssp --THHHHHHH-SSEE--TTS-TT-SSBSEEEEEETTEEEEEEEEE--TTS---S-HHHHHHHHHHH------SEEEEEEE
T ss_pred --HHHHHHhcCCCcEECCCCCCCCCcCcEEEEEECCEEEEEEECcccccCCCCCChHHHHHHHHHhccc-cCCEEEEEee
Confidence 2222222 222344322 34567889999998777777642 2222222334455555555422 6677888888
Q ss_pred cccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccc---eeeecccCCCcCCCCcEEEE
Q 012895 300 APWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAY---ERFTRIYDNKADPCGPIYIT 360 (454)
Q Consensus 300 ~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y---~r~~~~~~~~~~~~g~~yi~ 360 (454)
.= ......+| -.+-.-+|.+|+-=|+|.- +|.. |+|+-||+
T Consensus 148 AE-----------aTSEK~A~-g~~lDGrvsaV~GTHTHVqTaDerIL--------p~GTaYiT 191 (253)
T PF13277_consen 148 AE-----------ATSEKQAM-GWYLDGRVSAVVGTHTHVQTADERIL--------PGGTAYIT 191 (253)
T ss_dssp -S------------HHHHHHH-HHHHBTTBSEEEEESSSS-BS--EE---------TTS-EEES
T ss_pred cC-----------cHHHHHHH-HHHhCCcEEEEEeCCCCccCchhhcc--------CCCCEEEe
Confidence 52 12222333 3345668999999999983 3443 57999986
|
|
| >KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.096 Score=44.22 Aligned_cols=86 Identities=17% Similarity=0.317 Sum_probs=55.1
Q ss_pred HHHHHHHHhcCCcEEEecccccceeeecccCCCcCCCCcEEEEECCCCCCCCcccccCCCCCCCceeeecccCEEEEEEe
Q 012895 318 NSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQESSFGHARLKIL 397 (454)
Q Consensus 318 ~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~ 397 (454)
+.|.-+-++..||+.++||+|.++.+.. +|-.||..|++.... ...+ .......|..++|.
T Consensus 97 ~sL~~LaRqldvDILl~G~Th~f~Aye~--------eg~ffvnPGSaTGAf----n~~~-------t~~~~PSFvLmDiq 157 (183)
T KOG3325|consen 97 ESLALLARQLDVDILLTGHTHKFEAYEH--------EGKFFVNPGSATGAF----NVSD-------TDIIVPSFVLMDIQ 157 (183)
T ss_pred HHHHHHHHhcCCcEEEeCCceeEEEEEe--------CCcEEeCCCcccCCC----cccc-------cCCCCCceEEEEec
Confidence 4566666788999999999999988763 577788766653221 1111 11145677888886
Q ss_pred cCCeEEEEEEEecCCCceeeeEEEEEE
Q 012895 398 DETRAHWSWYRNNDSDAVIADEVRLES 424 (454)
Q Consensus 398 ~~~~~~~~~~~~~dg~~~~~D~~~i~~ 424 (454)
..+-..+-|.- -||+ |-.|.+...|
T Consensus 158 g~~~v~YvY~l-idge-VkVdki~ykK 182 (183)
T KOG3325|consen 158 GSTVVTYVYRL-IDGE-VKVDKIEYKK 182 (183)
T ss_pred CCEEEEEEeee-eCCc-EEEEEEEecC
Confidence 55555555433 3666 4577776654
|
|
| >cd07416 MPP_PP2B PP2B, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.021 Score=55.51 Aligned_cols=68 Identities=16% Similarity=0.203 Sum_probs=43.1
Q ss_pred EEEEEecCCCCCCh-HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCC--CeeecCCCcccC
Q 012895 149 EFAIVGDLGQTEWT-NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSR--PWMVTEGNHEIE 219 (454)
Q Consensus 149 ~f~~igD~~~~~~~-~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~--P~~~v~GNHD~~ 219 (454)
+++++||+|..... .++++.......+-++++||+++.+.... +. ...+..+.-.. -++.+.||||..
T Consensus 44 ~i~ViGDIHG~~~dL~~l~~~~g~~~~~~ylFLGDyVDRG~~s~--Ev-i~lL~~lki~~p~~v~lLRGNHE~~ 114 (305)
T cd07416 44 PVTVCGDIHGQFYDLLKLFEVGGSPANTRYLFLGDYVDRGYFSI--EC-VLYLWALKILYPKTLFLLRGNHECR 114 (305)
T ss_pred CEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEECCccCCCCChH--HH-HHHHHHHHhhcCCCEEEEeCCCcHH
Confidence 58999999966432 33555444455688999999998765422 12 22222332223 478899999984
|
PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G |
| >cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.022 Score=55.58 Aligned_cols=69 Identities=16% Similarity=0.154 Sum_probs=41.5
Q ss_pred EEEEEecCCCCCCh-HHHHHHhhcC-CCCeEeecCccccCCCChhhHHHHhhhhhhhhcC--CCeeecCCCcccCC
Q 012895 149 EFAIVGDLGQTEWT-NSTLDHVGSK-DYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASS--RPWMVTEGNHEIES 220 (454)
Q Consensus 149 ~f~~igD~~~~~~~-~~~l~~i~~~-~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~--~P~~~v~GNHD~~~ 220 (454)
++.++||+|..... ..+++..... .-+.+|++||+++.+...- +.+ .++-.+... --++.+.||||...
T Consensus 52 ~~~vvGDiHG~~~dL~~il~~~g~~~~~~~~lFLGDyVDRG~~s~--Evl-~ll~~lk~~~p~~v~llRGNHE~~~ 124 (321)
T cd07420 52 QVTICGDLHGKLDDLFLIFYKNGLPSPENPYVFNGDFVDRGKRSI--EIL-IILFAFFLVYPNEVHLNRGNHEDHI 124 (321)
T ss_pred CeEEEEeCCCCHHHHHHHHHHcCCCCccceEEEeccccCCCCCcH--HHH-HHHHHHhhcCCCcEEEecCchhhhh
Confidence 68999999976432 2334333222 2367999999999765422 222 222222212 34888999999853
|
RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all |
| >smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.029 Score=53.68 Aligned_cols=69 Identities=16% Similarity=0.096 Sum_probs=44.2
Q ss_pred eEEEEEecCCCCCCh-HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcC--CCeeecCCCcccC
Q 012895 148 IEFAIVGDLGQTEWT-NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASS--RPWMVTEGNHEIE 219 (454)
Q Consensus 148 ~~f~~igD~~~~~~~-~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~--~P~~~v~GNHD~~ 219 (454)
-+++++||+|..... ..+++.+.....+-++++||+++.+.... +. ...+..+.-. ..++.+.||||..
T Consensus 28 ~~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s~--e~-l~~l~~lk~~~p~~v~llrGNHE~~ 99 (271)
T smart00156 28 APVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFSI--EV-ILLLFALKILYPNRVVLLRGNHESR 99 (271)
T ss_pred CCEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccCCCCChH--HH-HHHHHHHHhcCCCCEEEEeccccHH
Confidence 358999999965432 34555555566788999999998665422 11 1222222222 3578999999984
|
Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members. |
| >KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.24 E-value=0.15 Score=52.69 Aligned_cols=182 Identities=20% Similarity=0.182 Sum_probs=87.9
Q ss_pred CCCeEEEEEecCCCCCC--------------hHH---HHHHh-hcCCCCeE-eecCccccCCCChhhHHHHhhhhhhhhc
Q 012895 145 NFPIEFAIVGDLGQTEW--------------TNS---TLDHV-GSKDYDVF-LLPGDLSYADFQQPLWDSFGRLVEPYAS 205 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~--------------~~~---~l~~i-~~~~pd~v-l~~GDl~y~~~~~~~~~~~~~~~~~l~~ 205 (454)
....+|..-+|+|..-. ..+ .++++ ....+|.+ +-+||+-+..++....+.-...-..+.+
T Consensus 40 ~~~~nf~hTtdthG~~~~h~~~~~~~~~~G~f~~f~~~~k~~a~~~~~dvl~~dtGD~hdGtg~sd~~~~~g~~t~~l~~ 119 (602)
T KOG4419|consen 40 WGQPNFIHTTDTHGWLGSHLRDARYDADFGDFAAFALRMKELADRKGVDVLLVDTGDLHDGTGLSDATDPPGIYTNFLFK 119 (602)
T ss_pred cccccceeeccccccccccccchhhhhhhhhHHHHHHHHHHHHhccCCCEEEEecccccCCceeeeccCCchHHHHHHHh
Confidence 45677888888764321 111 22222 35667765 5599998765542211110011111222
Q ss_pred CCC-eeecCCCcccCCCCCCCcchhhhhhhhccCCCCCC-----------CCCCCceEEEE-eCeEEEEEecccC-----
Q 012895 206 SRP-WMVTEGNHEIESIPIILPHAFKAYNARWLMPYEES-----------GSSSNLYYSFD-IAGAHIIMLGSYT----- 267 (454)
Q Consensus 206 ~~P-~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~-----------~~~~~~~ys~~-~g~v~fi~Lds~~----- 267 (454)
..| =..+.||||.+...-. ......|...|..|+-.+ .+....++.|. ..++.+..+..-.
T Consensus 120 ~~~yD~l~lGNHEl~~~~ve-~l~~~~f~~~~k~~~la~Nv~~~~~~~~~~p~~~~~~t~~t~~~~~v~~vG~~~~~f~~ 198 (602)
T KOG4419|consen 120 MMPYDILTLGNHELYQANVE-NLTEEYFLPAWKGPYLASNVQIFDSSNSFVPFGLEYATFLTPHGVVVLAVGFLCASFSG 198 (602)
T ss_pred cCccchhhhcchhhhhhhhh-ccchhhhhhhhccceeecceEEecCchhhccccccceEEeccCceEEEEEEEeeccccc
Confidence 233 3458999999643110 011112444444333211 01123344443 3333333322110
Q ss_pred -CCC------CCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHH-HHHHHHHhc-CCcE-EEeccc
Q 012895 268 -DFD------EDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRN-SMEELLYNA-RVDV-VFAGHV 337 (454)
Q Consensus 268 -~~~------~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~-~l~~ll~~~-~v~l-vl~GH~ 337 (454)
..+ ..-.|.+|-.+.++.- ..+.+|++.|.|.-... .++ .+.++...+ ++++ ||-||.
T Consensus 199 ~~n~~~v~~veei~~~~~~~~m~~~~---~idlii~lgH~~~~~~~---------e~~~~~~~ir~~~p~t~IqviGGHs 266 (602)
T KOG4419|consen 199 AANRTVVVPVEEITQSEWEQDMVNTT---DIDLIIALGHSPVRDDD---------EWKSLHAEIRKVHPNTPIQVIGGHS 266 (602)
T ss_pred cCCCcccccHHHHhccchHHHHhhcc---CccEEEEecccccccch---------hhhhHHHHHhhhCCCCceEEECchh
Confidence 111 1245677888777764 55668899999853221 112 333343334 5677 999999
Q ss_pred cc
Q 012895 338 HA 339 (454)
Q Consensus 338 H~ 339 (454)
|.
T Consensus 267 hi 268 (602)
T KOG4419|consen 267 HI 268 (602)
T ss_pred hh
Confidence 98
|
|
| >cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.19 E-value=0.028 Score=54.07 Aligned_cols=68 Identities=16% Similarity=0.199 Sum_probs=42.5
Q ss_pred EEEEEecCCCCCCh-HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcC--CCeeecCCCcccC
Q 012895 149 EFAIVGDLGQTEWT-NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASS--RPWMVTEGNHEIE 219 (454)
Q Consensus 149 ~f~~igD~~~~~~~-~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~--~P~~~v~GNHD~~ 219 (454)
.+.++||+|..... ..+++.......+-+|++||+++.+.... +. ...+..+.-. ..++.+.||||..
T Consensus 43 ~i~vvGDIHG~~~dL~~ll~~~~~~~~~~~lfLGDyVDRG~~s~--ev-l~ll~~lk~~~p~~v~llrGNHE~~ 113 (285)
T cd07415 43 PVTVCGDIHGQFYDLLELFRVGGDPPDTNYLFLGDYVDRGYYSV--ET-FLLLLALKVRYPDRITLLRGNHESR 113 (285)
T ss_pred CEEEEEeCCCCHHHHHHHHHHcCCCCCCeEEEEeEECCCCcCHH--HH-HHHHHHHhhcCCCcEEEEecccchH
Confidence 48899999965432 33455444445678999999998765422 11 1222223222 3589999999974
|
PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2 |
| >KOG3947 consensus Phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.12 E-value=0.65 Score=43.59 Aligned_cols=71 Identities=18% Similarity=0.209 Sum_probs=44.1
Q ss_pred CCCeEEEEEecCCCCCChHHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCC
Q 012895 145 NFPIEFAIVGDLGQTEWTNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIP 222 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~~~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~ 222 (454)
..-.||+.++|+|......+ .-..-|+++++||.+.-+-.+ +-..|.+.+-.+.-.. -+++.||||...+.
T Consensus 59 ~~~~r~VcisdtH~~~~~i~-----~~p~gDvlihagdfT~~g~~~-ev~~fn~~~gslph~y-KIVIaGNHELtFd~ 129 (305)
T KOG3947|consen 59 PGYARFVCISDTHELTFDIN-----DIPDGDVLIHAGDFTNLGLPE-EVIKFNEWLGSLPHEY-KIVIAGNHELTFDH 129 (305)
T ss_pred CCceEEEEecCcccccCccc-----cCCCCceEEeccCCccccCHH-HHHhhhHHhccCccee-eEEEeeccceeecc
Confidence 56789999999996543221 135788999999998744332 2223333333222112 35789999997653
|
|
| >cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.04 E-value=0.032 Score=53.91 Aligned_cols=68 Identities=21% Similarity=0.292 Sum_probs=42.8
Q ss_pred EEEEEecCCCCCC-hHHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcC--CCeeecCCCcccC
Q 012895 149 EFAIVGDLGQTEW-TNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASS--RPWMVTEGNHEIE 219 (454)
Q Consensus 149 ~f~~igD~~~~~~-~~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~--~P~~~v~GNHD~~ 219 (454)
.++++||+|.... ..++++.......+-+|++||+++.+.... +.+ ..+..+.-. ..++.+.||||..
T Consensus 51 ~i~viGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s~--e~i-~ll~~lk~~~p~~i~llrGNHE~~ 121 (293)
T cd07414 51 PLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSL--ETI-CLLLAYKIKYPENFFLLRGNHECA 121 (293)
T ss_pred ceEEEEecCCCHHHHHHHHHhcCCCCcceEEEEeeEecCCCCcH--HHH-HHHHHhhhhCCCcEEEEecccchh
Confidence 4889999996543 234555554555678999999998765422 111 122222222 2488899999985
|
PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg |
| >cd07418 MPP_PP7 PP7, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.99 E-value=0.036 Score=55.14 Aligned_cols=70 Identities=20% Similarity=0.209 Sum_probs=41.7
Q ss_pred eEEEEEecCCCCCCh-HHHHHHhhcCCC-CeEeecCccccCCCChhhHHHHhhhhhhhhcC--CCeeecCCCcccCC
Q 012895 148 IEFAIVGDLGQTEWT-NSTLDHVGSKDY-DVFLLPGDLSYADFQQPLWDSFGRLVEPYASS--RPWMVTEGNHEIES 220 (454)
Q Consensus 148 ~~f~~igD~~~~~~~-~~~l~~i~~~~p-d~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~--~P~~~v~GNHD~~~ 220 (454)
-++.++||+|..... ..+++.+..... +.+|++||+++.+.... +. ..++..+.-. .-++.+.||||...
T Consensus 66 ~~i~VvGDIHG~~~dL~~ll~~~g~~~~~~~ylFLGDyVDRGp~Sl--Ev-l~lL~~lki~~p~~v~lLRGNHE~~~ 139 (377)
T cd07418 66 CEVVVVGDVHGQLHDVLFLLEDAGFPDQNRFYVFNGDYVDRGAWGL--ET-FLLLLSWKVLLPDRVYLLRGNHESKF 139 (377)
T ss_pred CCEEEEEecCCCHHHHHHHHHHhCCCCCCceEEEeccccCCCCChH--HH-HHHHHHHhhccCCeEEEEeeeccccc
Confidence 368999999976432 234444332233 45899999998665422 12 1222223222 34889999999853
|
PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, |
| >PTZ00239 serine/threonine protein phosphatase 2A; Provisional | Back alignment and domain information |
|---|
Probab=94.76 E-value=0.048 Score=52.89 Aligned_cols=67 Identities=13% Similarity=0.230 Sum_probs=41.7
Q ss_pred EEEEecCCCCCCh-HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCC--CeeecCCCcccC
Q 012895 150 FAIVGDLGQTEWT-NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSR--PWMVTEGNHEIE 219 (454)
Q Consensus 150 f~~igD~~~~~~~-~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~--P~~~v~GNHD~~ 219 (454)
+.++||+|..... .++++.+.....+-++++||+++.+.... +. ...+..+.-.. -++.+.||||..
T Consensus 45 i~vvGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s~--ev-l~ll~~lk~~~p~~v~llrGNHE~~ 114 (303)
T PTZ00239 45 VNVCGDIHGQFYDLQALFKEGGDIPNANYIFIGDFVDRGYNSV--ET-MEYLLCLKVKYPGNITLLRGNHESR 114 (303)
T ss_pred EEEEEeCCCCHHHHHHHHHhcCCCCCceEEEeeeEcCCCCCHH--HH-HHHHHHhhhcCCCcEEEEecccchH
Confidence 8899999965432 33555444445677999999998765422 11 12222222222 488999999974
|
|
| >PTZ00244 serine/threonine-protein phosphatase PP1; Provisional | Back alignment and domain information |
|---|
Probab=94.23 E-value=0.055 Score=52.30 Aligned_cols=67 Identities=19% Similarity=0.326 Sum_probs=41.5
Q ss_pred EEEEecCCCCCCh-HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhh--hcCCCeeecCCCcccC
Q 012895 150 FAIVGDLGQTEWT-NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPY--ASSRPWMVTEGNHEIE 219 (454)
Q Consensus 150 f~~igD~~~~~~~-~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l--~~~~P~~~v~GNHD~~ 219 (454)
+.++||+|..... .++++.+.....+-++++||+++.+.... +.+ ..+-.+ .....++.+.||||..
T Consensus 54 ~~ViGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s~--evl-~ll~~lk~~~p~~v~llrGNHE~~ 123 (294)
T PTZ00244 54 VRVCGDTHGQYYDLLRIFEKCGFPPYSNYLFLGDYVDRGKHSV--ETI-TLQFCYKIVYPENFFLLRGNHECA 123 (294)
T ss_pred ceeeccCCCCHHHHHHHHHHcCCCCcccEEEeeeEecCCCCHH--HHH-HHHHHHhhccCCeEEEEecccchH
Confidence 7889999965432 34555554445567889999998765422 111 111111 1124588999999974
|
|
| >PTZ00480 serine/threonine-protein phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.86 E-value=0.085 Score=51.50 Aligned_cols=68 Identities=21% Similarity=0.289 Sum_probs=42.2
Q ss_pred EEEEEecCCCCCC-hHHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcC--CCeeecCCCcccC
Q 012895 149 EFAIVGDLGQTEW-TNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASS--RPWMVTEGNHEIE 219 (454)
Q Consensus 149 ~f~~igD~~~~~~-~~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~--~P~~~v~GNHD~~ 219 (454)
+++++||+|.... ..++++.......+-+|++||+++.+.... +.+ ..+..+.-. ..++.+.||||..
T Consensus 60 ~i~vvGDIHG~~~dL~~l~~~~g~~~~~~ylfLGDyVDRG~~s~--evl-~ll~~lki~~p~~v~llRGNHE~~ 130 (320)
T PTZ00480 60 PLKICGDVHGQYFDLLRLFEYGGYPPESNYLFLGDYVDRGKQSL--ETI-CLLLAYKIKYPENFFLLRGNHECA 130 (320)
T ss_pred CeEEEeecccCHHHHHHHHHhcCCCCcceEEEeceecCCCCCcH--HHH-HHHHHhcccCCCceEEEecccchh
Confidence 4889999996532 233555444445677899999998665421 221 222222222 3488999999984
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=93.71 E-value=0.26 Score=52.73 Aligned_cols=84 Identities=21% Similarity=0.370 Sum_probs=53.7
Q ss_pred CCCCCee---EEEEecCCCcEEEEEEeCCCCCccE----EEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCC
Q 012895 50 SESDPQQ---VHISLAAKDYIRVSWITDDKEAESV----VEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEP 122 (454)
Q Consensus 50 ~~~~p~~---v~l~~~~~~~~~v~W~t~~~~~~~~----v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p 122 (454)
+..+|.+ +|+.....++++++|.-++.+.... |+|-+.... ..+|.. ...-...++|+||+|
T Consensus 439 ~qa~ps~V~~~r~~~~~~~sitlsW~~p~~png~ildYEvky~ek~~~--------e~~~~~---~~t~~~~~ti~gL~p 507 (996)
T KOG0196|consen 439 NQAAPSPVSVLRQVSRTSDSITLSWSEPDQPNGVILDYEVKYYEKDED--------ERSYST---LKTKTTTATITGLKP 507 (996)
T ss_pred cccCCCccceEEEeeeccCceEEecCCCCCCCCcceeEEEEEeecccc--------ccceeE---EecccceEEeeccCC
Confidence 3445544 5665566899999999998665443 444433211 111111 112345688999999
Q ss_pred CCEEEEEeCc--------cCceeEEECCCC
Q 012895 123 ATTYYYRCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 123 ~t~Y~Yrv~~--------~s~~~~F~T~p~ 144 (454)
||.|-++|.. -|....|.|.|.
T Consensus 508 ~t~YvfqVRarT~aG~G~~S~~~~fqT~~~ 537 (996)
T KOG0196|consen 508 GTVYVFQVRARTAAGYGPYSGKHEFQTLPS 537 (996)
T ss_pred CcEEEEEEEEecccCCCCCCCceeeeecCc
Confidence 9999999963 367788998774
|
|
| >PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast | Back alignment and domain information |
|---|
Probab=92.68 E-value=0.13 Score=47.10 Aligned_cols=114 Identities=12% Similarity=0.074 Sum_probs=54.3
Q ss_pred EEEEecCCCCCCh--H----HHHHHhh-cCCCCeEeecCccccCCCChh---------hH-----HHHhhhhhhhhcCCC
Q 012895 150 FAIVGDLGQTEWT--N----STLDHVG-SKDYDVFLLPGDLSYADFQQP---------LW-----DSFGRLVEPYASSRP 208 (454)
Q Consensus 150 f~~igD~~~~~~~--~----~~l~~i~-~~~pd~vl~~GDl~y~~~~~~---------~~-----~~~~~~~~~l~~~~P 208 (454)
|++++|.+.+... . +.+..+. ..+|+.+|++|++++...... .. ..+.+.+..+...++
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 5788998877432 2 2334445 778999999999998543211 11 112223344445689
Q ss_pred eeecCCCcccCCCCCCCcchhhhh-hhhccCCCCCCCCCCCceEEEEeCeEEEEEecc
Q 012895 209 WMVTEGNHEIESIPIILPHAFKAY-NARWLMPYEESGSSSNLYYSFDIAGAHIIMLGS 265 (454)
Q Consensus 209 ~~~v~GNHD~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds 265 (454)
++.+||+||......+++..+... ........ .-.--..-+.+.++++.|.+...
T Consensus 81 vvlvPg~~D~~~~~~lPq~pl~~~~~~~~~~~~--~~~~~sNP~~~~i~~~~i~~~s~ 136 (209)
T PF04042_consen 81 VVLVPGPNDPTSSPVLPQPPLHSKLFPKLKKYS--NIHFVSNPCRISINGQEIGVTSG 136 (209)
T ss_dssp EEEE--TTCTT-S-SCSB----TTTTCHHCTTT--TEEE--CSEEEEETTEEEEE-SS
T ss_pred EEEeCCCccccccCCCCCCCCCHHHHhhhhhcC--ceEEeCCCeEEEEeCCcEEEECC
Confidence 999999999965533322222111 00000000 00000123557888888888764
|
In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G. |
| >cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=92.66 E-value=0.17 Score=49.44 Aligned_cols=69 Identities=14% Similarity=0.257 Sum_probs=40.4
Q ss_pred eEEEEEecCCCCCCh-HHHHHHhhcC-CCCeEeecCccccCCCChhhHHHHhhhhhhhhc--CCCeeecCCCcccC
Q 012895 148 IEFAIVGDLGQTEWT-NSTLDHVGSK-DYDVFLLPGDLSYADFQQPLWDSFGRLVEPYAS--SRPWMVTEGNHEIE 219 (454)
Q Consensus 148 ~~f~~igD~~~~~~~-~~~l~~i~~~-~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~--~~P~~~v~GNHD~~ 219 (454)
-++.++||+|..... .++++..... .-|-+|++||+++.+.... +.+ ..+-.+.- ..-++.+.||||..
T Consensus 60 ~~~~VvGDIHG~~~dL~~ll~~~g~~~~~~~ylFLGDyVDRG~~S~--Evl-~ll~~lki~~p~~v~lLRGNHE~~ 132 (316)
T cd07417 60 EKITVCGDTHGQFYDLLNIFELNGLPSETNPYLFNGDFVDRGSFSV--EVI-LTLFAFKLLYPNHFHLNRGNHETD 132 (316)
T ss_pred ceeEEeecccCCHHHHHHHHHhcCCCCccCeEEEEeeEecCCCChH--HHH-HHHHHhhhccCCceEEEeeccchH
Confidence 478999999965432 2344433222 2357999999998765422 222 11112211 13478899999973
|
Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel |
| >smart00060 FN3 Fibronectin type 3 domain | Back alignment and domain information |
|---|
Probab=92.38 E-value=1 Score=32.54 Aligned_cols=69 Identities=13% Similarity=0.232 Sum_probs=39.0
Q ss_pred eEEEEecCCCcEEEEEEeCCCCC--ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEeCc
Q 012895 56 QVHISLAAKDYIRVSWITDDKEA--ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCGG 132 (454)
Q Consensus 56 ~v~l~~~~~~~~~v~W~t~~~~~--~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv~~ 132 (454)
.+++.....+++.|.|....... .-.++|........ ....... .....+...|.+|+|++.|.++|..
T Consensus 6 ~~~~~~~~~~~~~v~W~~~~~~~~~~y~~~~~~~~~~~~----~~~~~~~----~~~~~~~~~i~~L~~~~~Y~v~v~a 76 (83)
T smart00060 6 NLRVTDVTSTSVTLSWEPPPDDGITGYIVGYRVEYREEG----SSWKEVN----VTPSSTSYTLTGLKPGTEYEFRVRA 76 (83)
T ss_pred cEEEEEEeCCEEEEEECCCCCCCCCccEEEEEEEEecCC----CccEEEE----ecCCccEEEEeCcCCCCEEEEEEEE
Confidence 35566555569999998553221 23455554432111 0000000 1111567889999999999999853
|
One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. |
| >cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=91.78 E-value=0.32 Score=47.51 Aligned_cols=68 Identities=21% Similarity=0.150 Sum_probs=39.2
Q ss_pred EEEEEecCCCCCCh-HHHHHHhhcC----CC----CeEeecCccccCCCChhhHHHHhhhhhhhhcC--CCeeecCCCcc
Q 012895 149 EFAIVGDLGQTEWT-NSTLDHVGSK----DY----DVFLLPGDLSYADFQQPLWDSFGRLVEPYASS--RPWMVTEGNHE 217 (454)
Q Consensus 149 ~f~~igD~~~~~~~-~~~l~~i~~~----~p----d~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~--~P~~~v~GNHD 217 (454)
.+.++||+|..... .++++.+... .. .-+|++||+++.+.... + ....+..+... .-++.+.||||
T Consensus 49 ~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~~~~~~~vfLGDyVDRGp~s~--e-vl~ll~~lk~~~p~~v~lLRGNHE 125 (311)
T cd07419 49 PIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGDIEYIDYLFLGDYVDRGSNSL--E-TICLLLALKVKYPNQIHLIRGNHE 125 (311)
T ss_pred CEEEEEeccCCHHHHHHHHHHcCCCcccccCCCcCceEEEECCccCCCCChH--H-HHHHHHHhhhcCCCcEEEeccccc
Confidence 37889999965432 3355444211 11 23789999998665422 1 12222223222 35788999999
Q ss_pred cC
Q 012895 218 IE 219 (454)
Q Consensus 218 ~~ 219 (454)
..
T Consensus 126 ~~ 127 (311)
T cd07419 126 DR 127 (311)
T ss_pred hH
Confidence 74
|
Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most |
| >cd00063 FN3 Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin | Back alignment and domain information |
|---|
Probab=89.21 E-value=3 Score=31.00 Aligned_cols=68 Identities=18% Similarity=0.320 Sum_probs=38.0
Q ss_pred eeEEEEecCCCcEEEEEEeCCCC----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEe
Q 012895 55 QQVHISLAAKDYIRVSWITDDKE----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRC 130 (454)
Q Consensus 55 ~~v~l~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv 130 (454)
..+.+.....+++.|.|...... ..-.|.|.......... .. ....-..++.|.+|.|++.|.++|
T Consensus 5 ~~~~~~~~~~~~~~v~W~~~~~~~~~~~~y~v~~~~~~~~~~~~-------~~---~~~~~~~~~~i~~l~p~~~Y~~~v 74 (93)
T cd00063 5 TNLRVTDVTSTSVTLSWTPPEDDGGPITGYVVEYREKGSGDWKE-------VE---VTPGSETSYTLTGLKPGTEYEFRV 74 (93)
T ss_pred CCcEEEEecCCEEEEEECCCCCCCCcceeEEEEEeeCCCCCCEE-------ee---ccCCcccEEEEccccCCCEEEEEE
Confidence 33444444578999999887432 12233443332111111 00 011245667889999999999998
Q ss_pred Cc
Q 012895 131 GG 132 (454)
Q Consensus 131 ~~ 132 (454)
..
T Consensus 75 ~a 76 (93)
T cd00063 75 RA 76 (93)
T ss_pred EE
Confidence 53
|
Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. |
| >KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=87.34 E-value=0.89 Score=50.88 Aligned_cols=80 Identities=26% Similarity=0.449 Sum_probs=49.5
Q ss_pred CCCCCeeEEEEecCCCcEEEEEEeCCCCCc-c-----EEEEeecCCCCc---eEEEeEeEEEeeeeeecCeEEEEEECCC
Q 012895 50 SESDPQQVHISLAAKDYIRVSWITDDKEAE-S-----VVEYGKLPGRYN---TVATGEHTSYQFFFYKSGKIHHVKIGPL 120 (454)
Q Consensus 50 ~~~~p~~v~l~~~~~~~~~v~W~t~~~~~~-~-----~v~y~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~gL 120 (454)
+...|+-|.+....+++++|.|..+..... . .++|++.+.... ..+.+. ...-.+++|
T Consensus 615 PsaPP~Nl~lev~sStsVrVsW~pP~~~t~ng~itgYkIRy~~~~~~~~~~~t~v~~n-------------~~~~l~~~L 681 (1381)
T KOG4221|consen 615 PSAPPQNLSLEVVSSTSVRVSWLPPPSETQNGQITGYKIRYRKLSREDEVNETVVKGN-------------TTQYLFNGL 681 (1381)
T ss_pred CCCCCcceEEEecCCCeEEEEccCCCcccccceEEEEEEEecccCcccccceeecccc-------------hhhhHhhcC
Confidence 455566699999999999999999864322 1 233443322111 111111 112246789
Q ss_pred CCCCEEEEEeCc--------cCceeEEECC
Q 012895 121 EPATTYYYRCGG--------RGPEFSFKMP 142 (454)
Q Consensus 121 ~p~t~Y~Yrv~~--------~s~~~~F~T~ 142 (454)
+|+|.|.+||.. .+++.+|.|+
T Consensus 682 ep~T~Y~vrIsa~t~nGtGpaS~w~~aeT~ 711 (1381)
T KOG4221|consen 682 EPNTQYRVRISAMTVNGTGPASEWVSAETP 711 (1381)
T ss_pred CCCceEEEEEEEeccCCCCCcccceeccCc
Confidence 999999999953 3567778775
|
|
| >KOG3513 consensus Neural cell adhesion molecule L1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=83.50 E-value=3.6 Score=46.00 Aligned_cols=75 Identities=19% Similarity=0.269 Sum_probs=51.2
Q ss_pred CCCCCCeeEEEEecCCCcEEEEEEeCC----CCCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCC
Q 012895 49 RSESDPQQVHISLAAKDYIRVSWITDD----KEAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPAT 124 (454)
Q Consensus 49 ~~~~~p~~v~l~~~~~~~~~v~W~t~~----~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 124 (454)
.+..+|+.+++...+.+++.|.|...- ....-.|+|+...+... ...... ..+-.-...|+||+|+|
T Consensus 818 ~P~~ap~~~~~~~~s~s~~~v~W~~~~~~nG~l~gY~v~Y~~~~~~~~-----~~~~~~----i~~~~~~~~ltgL~~~T 888 (1051)
T KOG3513|consen 818 EPPVAPTKLSAKPLSSSEVNLSWKPPLWDNGKLTGYEVKYWKINEKEG-----SLSRVQ----IAGNRTSWRLTGLEPNT 888 (1051)
T ss_pred CCCCCCccceeecccCceEEEEecCcCccCCccceeEEEEEEcCCCcc-----ccccee----ecCCcceEeeeCCCCCc
Confidence 446788888888888999999995442 23456888998765431 110111 12344557899999999
Q ss_pred EEEEEeCc
Q 012895 125 TYYYRCGG 132 (454)
Q Consensus 125 ~Y~Yrv~~ 132 (454)
.|++.|..
T Consensus 889 ~Y~~~vrA 896 (1051)
T KOG3513|consen 889 KYRFYVRA 896 (1051)
T ss_pred eEEEEEEE
Confidence 99999863
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 454 | ||||
| 4dsy_A | 426 | Crystal Structure Of Red Kidney Bean Purple Acid Ph | 9e-76 | ||
| 1kbp_A | 432 | Kidney Bean Purple Acid Phosphatase Length = 432 | 1e-75 | ||
| 2qfp_A | 424 | Crystal Structure Of Red Kidney Bean Purple Acid Ph | 1e-75 | ||
| 1xzw_A | 426 | Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPL | 7e-73 |
| >pdb|4DSY|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid Phosphatase In Complex With Maybridge Fragment Cc24201 Length = 426 | Back alignment and structure |
|
| >pdb|1KBP|A Chain A, Kidney Bean Purple Acid Phosphatase Length = 432 | Back alignment and structure |
|
| >pdb|2QFP|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid Phosphatase In Complex With Fluoride Length = 424 | Back alignment and structure |
|
| >pdb|1XZW|A Chain A, Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPLEX Length = 426 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 454 | |||
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 1e-133 | |
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 1e-131 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 9e-36 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 2e-35 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 2e-12 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 6e-12 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 2e-11 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 5e-08 | |
| 1uf3_A | 228 | Hypothetical protein TT1561; metallo-dependent pho | 8e-07 |
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* Length = 424 | Back alignment and structure |
|---|
Score = 389 bits (999), Expect = e-133
Identities = 162/398 (40%), Positives = 215/398 (54%), Gaps = 25/398 (6%)
Query: 50 SESDPQQVHISLAAK--DYIRVSWITDDKEAESVVEYGKLPGRYNTVATGEHTSYQFFFY 107
+ PQQVHI+ + +SW+T D+ S V Y +A G+ ++Y+FF Y
Sbjct: 15 GYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGKMSTYRFFNY 74
Query: 108 KSGKIHHVKIGPLEPATTYYYRCGGRG--PEFSFKMPPA---NFPIEFAIVGDLGQTEWT 162
SG IHH I L+ T YYY G R FSF PP + P F ++GDLGQ+ +
Sbjct: 75 SSGFIHHTTIRKLKYNTKYYYEVGLRNTTRRFSFITPPQTGLDVPYTFGLIGDLGQSFDS 134
Query: 163 NSTLDH--VGSKDYDVFLLPGDLSYAD----FQQPLWDSFGRLVEPYASSRPWMVTEGNH 216
N+TL H + K L GDLSYAD WD++GR E + +PW+ T GNH
Sbjct: 135 NTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNH 194
Query: 217 EIESIPII-LPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQ 275
EIE P I FK ++ R+ +PYE S S+S +YS A AHII+L SY+ + + Q
Sbjct: 195 EIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQ 254
Query: 276 YKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAG 335
Y WLK +L K+ R +TPW+ VL+H+P YN+ H EGE+MR E +VDVVFAG
Sbjct: 255 YTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAG 314
Query: 336 HVHAYERFTRIYDNKAD-----------PCGPIYITIGDGGNREGLALEFKEPKSPLSMF 384
HVHAYER R+ + P+YITIGD GN + +P+ S F
Sbjct: 315 HVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYGVIDSNMIQPQPEYSAF 374
Query: 385 QESSFGHARLKILDETRAHWSWYRNNDSDAVIADEVRL 422
+E+SFGH I + T AH+SW RN D AV AD V
Sbjct: 375 REASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWF 412
|
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 Length = 426 | Back alignment and structure |
|---|
Score = 384 bits (988), Expect = e-131
Identities = 161/412 (39%), Positives = 222/412 (53%), Gaps = 28/412 (6%)
Query: 39 PRSVIQTPNKRSESDPQQVHISLAAKDY--IRVSWITD-DKEAESVVEYGKLPGRYNTVA 95
V P+ + PQQVHI+ + + +SW T DK + V Y + A
Sbjct: 12 DSDVFAVPS--GYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKSQKRA 69
Query: 96 TGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCG--GRGPEFSFKMPPA---NFPIEF 150
G +Y+++ Y S IHH I LE T YYYR G +F F PP + P F
Sbjct: 70 MGTVVTYKYYNYTSAFIHHCTIKDLEYDTKYYYRLGFGDAKRQFWFVTPPKPGPDVPYVF 129
Query: 151 AIVGDLGQTEWTNSTLDHVGSK--DYDVFLLPGDLSYAD----FQQPLWDSFGRLVEPYA 204
++GD+GQT +N+TL H L GDLSY++ WD++GR E
Sbjct: 130 GLIGDIGQTHDSNTTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSERSV 189
Query: 205 SSRPWMVTEGNHEIESIPIILP-HAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIML 263
+ +PW+ T GNHEI+ P I F + R+ P+E SGS L+Y+ A AHII+L
Sbjct: 190 AYQPWIWTAGNHEIDYAPDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRASAHIIVL 249
Query: 264 GSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEEL 323
SY+ F + S QYKW ++L K+NR +TPW+ VL+HAP YN+ AH EGE+MR E
Sbjct: 250 SSYSGFVKYSPQYKWFTSELEKVNRSETPWLIVLVHAPLYNSYEAHYMEGEAMRAIFEPY 309
Query: 324 LYNARVDVVFAGHVHAYERFTRIYDNKAD-----------PCGPIYITIGDGGNREGLAL 372
+VD+VF+GHVH+YER R+ + + P+YITIGDGGN EGLA
Sbjct: 310 FVYYKVDIVFSGHVHSYERSERVSNVAYNIVNAKCTPVSDESAPVYITIGDGGNSEGLAS 369
Query: 373 EFKEPKSPLSMFQESSFGHARLKILDETRAHWSWYRNNDSDAVIADEVRLES 424
E +P+ S F+E+SFGH I + T AH+SW+RN D +V AD + L +
Sbjct: 370 EMTQPQPSYSAFREASFGHGIFDIKNRTHAHFSWHRNQDGASVEADSLWLLN 421
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* Length = 313 | Back alignment and structure |
|---|
Score = 133 bits (336), Expect = 9e-36
Identities = 52/316 (16%), Positives = 89/316 (28%), Gaps = 53/316 (16%)
Query: 144 ANFPIEFAIVGDLGQTEWTNSTLDH-----------VGSKDYDVFLLPGDLSYADFQQPL 192
+ F VGD G V + D L GD Y
Sbjct: 3 PTPILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDA 62
Query: 193 WDS------FGRLVEPYASSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMP------Y 240
D +P + PW V GNH+ + A+ + RW P
Sbjct: 63 KDKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLG-NVSAQIAYSKISKRWNFPSPYYRLR 121
Query: 241 EESGSSSNLYYSFDIAGAHIIML---------GSYTDFDEDSAQYKWLKADLAKINRKKT 291
+ S+ F + + + Q W+K LA K
Sbjct: 122 FKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAA---AKE 178
Query: 292 PWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKA 351
++ V H P ++ A G + + LL +V GH H +
Sbjct: 179 DYVLVAGHYPVWSI--AEHGPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQYLQ------- 229
Query: 352 DPCGPIYITIGDGGNREGLALEFKEPKSPLSMF----QESSFGHARLKILDETRAHWSWY 407
D G ++ G G + ++ + F + S G A ++I ++
Sbjct: 230 DENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVEI-TPKEMSVTYI 288
Query: 408 RNNDSDAVIADEVRLE 423
++ + +L
Sbjct: 289 ---EASGKSLFKTKLP 301
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} Length = 342 | Back alignment and structure |
|---|
Score = 133 bits (335), Expect = 2e-35
Identities = 48/309 (15%), Positives = 88/309 (28%), Gaps = 60/309 (19%)
Query: 147 PIEFAIVGDLG-----QTEWTNSTLDHVGSKDYDVFLLPGDLSY---ADFQQPLWDSFGR 198
+ FA +GD G Q + ++ + PG P W +
Sbjct: 3 QLRFASLGDWGKDTKGQILNAKYFKQFIKNERVTFIVSPGSNFIDGVKGLNDPAWKNLYE 62
Query: 199 LVEPYASS---RPWMVTEGNHEIE------------------SIPIILPHAFKAYNARWL 237
V P+ G + I A +W+
Sbjct: 63 DVYSEEKGDMYMPFFTVLGTRDWTGNYNAQLLKGQGIYIEKNGETSIEKDADATNYPKWI 122
Query: 238 MP---------YEESGSSSNLYYSFDIAGAHIIML------GSYTDFDEDSAQYKWLKAD 282
MP + S S + A I + ++ + LK+
Sbjct: 123 MPNYWYHYFTHFTVSSGPSIVKTGHKDLAAAFIFIDTWVLSSNFPYKKIHEKAWNDLKSQ 182
Query: 283 LAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYER 342
L+ +K +I V+ P Y++ + + + LL +A VD+ +GH + E
Sbjct: 183 LSV-AKKIADFIIVVGDQPIYSS--GYSRGSSYLAYYLLPLLKDAEVDLYISGHDNNMEV 239
Query: 343 FTRIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQESSFGHARLKILDETRA 402
+ +IT G G +G K+ S+F S G ++
Sbjct: 240 I--------EDNDMAHITCGSGSMSQGK----SGMKNSKSLFFSSDIGFCVHEL-SNNGI 286
Query: 403 HWSWYRNND 411
+ +
Sbjct: 287 VTKFVSSKK 295
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} Length = 443 | Back alignment and structure |
|---|
Score = 67.5 bits (164), Expect = 2e-12
Identities = 40/230 (17%), Positives = 77/230 (33%), Gaps = 36/230 (15%)
Query: 158 QTEWTNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPY-ASSRPWMVTEGNH 216
E T++ L V SK DV ++ GDL+ + ++ + + + + V GNH
Sbjct: 77 SDEITDAFLADVESKKTDVLIISGDLTN-NGEKTSHEELAKKLTQVEKNGTQVFVVPGNH 135
Query: 217 EI-------------ESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIA-GAHIIM 262
+I I P F + + S +L Y + ++M
Sbjct: 136 DINNPWARKFEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSKVWLLM 195
Query: 263 LGS------------YTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQ 310
L + T+ + W+K A + + +LH + N
Sbjct: 196 LDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKKNGAK-LIPVLHHNLTDHNDVI- 253
Query: 311 GEGESMRNSME--ELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIY 358
+G ++ + + + L +D +GH+H I K+ I
Sbjct: 254 QKGYTINYNQQVIDALTEGAMDFSLSGHIHT----QNIRSAKSTDGKEIT 299
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A Length = 274 | Back alignment and structure |
|---|
Score = 64.8 bits (158), Expect = 6e-12
Identities = 26/184 (14%), Positives = 56/184 (30%), Gaps = 27/184 (14%)
Query: 165 TLDHVG--SKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSR-PWMVTEGNHEIESI 221
+ + + D ++ GD+ + + + S P + GNH+
Sbjct: 31 VVSQLNALRERPDAVVVSGDIV----NCGRPEEYQVARQILGSLNYPLYLIPGNHDD--- 83
Query: 222 PIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGS----YTDFDEDSAQYK 277
F Y + ++N+ + D ++ + S +
Sbjct: 84 ----KALFLEYLQPL--CPQLGSDANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETIS 137
Query: 278 WLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNS---MEELLYNARVDVVFA 334
WL+A L + K + +H P A + + N + + + +F
Sbjct: 138 WLEAQLFEGGDKPA---TIFMHHPPLPLGNAQ-MDPIACENGHRLLALVERFPSLTRIFC 193
Query: 335 GHVH 338
GH H
Sbjct: 194 GHNH 197
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A Length = 330 | Back alignment and structure |
|---|
Score = 64.2 bits (156), Expect = 2e-11
Identities = 36/187 (19%), Positives = 64/187 (34%), Gaps = 34/187 (18%)
Query: 165 TLDHVGS--KDYDVFLLPGDLSYADFQQPLWDSFGRL---VEPYASSR--PWMVTEGNHE 217
L+ + D + GDL+ + ++ +L VEP+A+ + GNH+
Sbjct: 56 LLEQLNQSGLRPDAIVFTGDLA----DKGEPAAYRKLRGLVEPFAAQLGAELVWVMGNHD 111
Query: 218 IESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDED----S 273
+ + + S + L I G II+L + +
Sbjct: 112 D-------RAELRKFLLDE------APSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRA 158
Query: 274 AQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSME--ELLYNARVDV 331
+Q WL +LA T + LH P + +R+ +L V
Sbjct: 159 SQLGWLAEELATPAPDGT---ILALHHPPIPSVLDM-AVTVELRDQAALGRVLRGTDVRA 214
Query: 332 VFAGHVH 338
+ AGH+H
Sbjct: 215 ILAGHLH 221
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 Length = 322 | Back alignment and structure |
|---|
Score = 53.4 bits (127), Expect = 5e-08
Identities = 33/250 (13%), Positives = 61/250 (24%), Gaps = 60/250 (24%)
Query: 165 TLDHVGSKDYDVFLLPGDLSYADFQQPLWD--SFGRLVEPYAS-SRPWMVTEGNHEIESI 221
+ + + GD+ ++ + ++ + S GNHE +
Sbjct: 43 AVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAELDACSVDVHHVWGNHEFYNF 102
Query: 222 PI--ILPHAFKAYNARWLMPYEESGSSSNLYYSFDIA-GAHIIMLGSYTDFD-------- 270
+L + + Y F A ++L +Y
Sbjct: 103 SRPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESE 162
Query: 271 --------------------------------------EDSAQYKWLKADLAKINRKKTP 292
Q +WL A L + K+
Sbjct: 163 KHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQER 222
Query: 293 WIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKAD 352
+ + H P + + + L + V AGH H R T D
Sbjct: 223 -VLIFSHLPVHPCAADPICLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCT-------D 274
Query: 353 PCGPIYITIG 362
G +IT+
Sbjct: 275 SSGAQHITLE 284
|
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 Length = 228 | Back alignment and structure |
|---|
Score = 49.0 bits (116), Expect = 8e-07
Identities = 27/192 (14%), Positives = 50/192 (26%), Gaps = 16/192 (8%)
Query: 152 IVGDL-GQTEWTNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWM 210
+ G E + D L G+L + + +F R++ P
Sbjct: 10 ATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEA--HLPTA 67
Query: 211 VTEGNHEIESIPIILPHAFKAYNARWLMPY----EESGSSSNLYYSFDIAGAHIIMLGSY 266
G + + +A N + P E+ + Y G I G
Sbjct: 68 YVPGPQDAPIWEYLR----EAANVELVHPEMRNVHETFTFWRGPYLVAGVGGEIADEGEP 123
Query: 267 TDFDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYN 326
+ + + L + K L H Y+ QG + + L+
Sbjct: 124 EEHEALRYPAWVAEYRLKALWELKDYPKIFLFHTMPYHKGLNEQG-----SHEVAHLIKT 178
Query: 327 ARVDVVFAGHVH 338
+V
Sbjct: 179 HNPLLVLVAGKG 190
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 454 | |||
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 100.0 | |
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 100.0 | |
| 2yeq_A | 527 | Apased, PHOD, alkaline phosphatase D; hydrolase, p | 100.0 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 100.0 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 99.98 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 99.92 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 99.9 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 99.89 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 99.84 | |
| 1uf3_A | 228 | Hypothetical protein TT1561; metallo-dependent pho | 99.63 | |
| 2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, | 99.61 | |
| 2q8u_A | 336 | Exonuclease, putative; structural genomics, joint | 99.61 | |
| 1z2w_A | 192 | Vacuolar protein sorting 29; VPS29, retromer, phos | 99.46 | |
| 3rl5_A | 296 | Metallophosphoesterase mpped2; alpha-beta fold, me | 99.45 | |
| 2a22_A | 215 | Vacuolar protein sorting 29; alpha-beta-BETA-alpha | 99.44 | |
| 3av0_A | 386 | DNA double-strand break repair protein MRE11; DNA | 99.43 | |
| 3qfm_A | 270 | SAPH, putative uncharacterized protein; sandwich f | 99.4 | |
| 3tho_B | 379 | Exonuclease, putative; adenosine triphosphate, bac | 99.4 | |
| 1nnw_A | 252 | Hypothetical protein; structural genomics, PSI, pr | 99.39 | |
| 3ck2_A | 176 | Conserved uncharacterized protein (predicted phosp | 99.37 | |
| 1xm7_A | 195 | Hypothetical protein AQ_1665; structural genomics, | 99.27 | |
| 3rqz_A | 246 | Metallophosphoesterase; PSI-biology, midwest cente | 99.23 | |
| 2kkn_A | 178 | Uncharacterized protein; protein phosphatase 2A ho | 99.21 | |
| 1ii7_A | 333 | MRE11 nuclease; RAD50, DNA double-strand break rep | 99.2 | |
| 1s3l_A | 190 | Hypothetical protein MJ0936; phosphodiesterase, nu | 99.18 | |
| 3t1i_A | 431 | Double-strand break repair protein MRE11A; DNA rep | 99.17 | |
| 4fbk_A | 472 | DNA repair and telomere maintenance protein NBS1, | 99.17 | |
| 4fbw_A | 417 | DNA repair protein RAD32; DNA double-strand break | 99.16 | |
| 1su1_A | 208 | Hypothetical protein YFCE; structural genomics, ph | 98.87 | |
| 1hp1_A | 516 | 5'-nucleotidase; metallophosphatase, dinuclear, me | 98.83 | |
| 2z1a_A | 552 | 5'-nucleotidase; metal-binding, nucleotide-binding | 98.78 | |
| 3qfk_A | 527 | Uncharacterized protein; structural genomics, cent | 98.77 | |
| 4h2g_A | 546 | 5'-nucleotidase; dimer, hydrolase, phosphatase, ex | 98.63 | |
| 2wdc_A | 562 | SOXB, sulfur oxidation protein SOXB; sulfur-sulfur | 98.61 | |
| 3ztv_A | 579 | NAD nucleotidase, NADN; hydrolase, NAD pyrophospha | 98.59 | |
| 3ive_A | 509 | Nucleotidase; structural genomics, PSI-2, protein | 98.58 | |
| 1g5b_A | 221 | Serine/threonine protein phosphatase; bacteriophag | 98.56 | |
| 1t70_A | 255 | Phosphatase; crystal, X-RAY crystallography, struc | 98.3 | |
| 1t71_A | 281 | Phosphatase, conserved HYPO; crystal, X-RAY crysta | 98.28 | |
| 3gve_A | 341 | YFKN protein; alpha-beta-BETA-alpha sandwich, stru | 98.28 | |
| 2z06_A | 252 | Putative uncharacterized protein TTHA0625; metal b | 98.28 | |
| 3c9f_A | 557 | 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, p | 98.17 | |
| 3jyf_A | 339 | 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- n | 97.97 | |
| 4h1s_A | 530 | 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo | 97.85 | |
| 2qjc_A | 262 | Diadenosine tetraphosphatase, putative; putative d | 97.48 | |
| 2dfj_A | 280 | Diadenosinetetraphosphatase; helices and strands m | 97.37 | |
| 2edd_A | 123 | Netrin receptor DCC; tumor suppressor protein DCC, | 97.2 | |
| 2ede_A | 114 | Netrin receptor DCC; tumor suppressor protein DCC, | 97.2 | |
| 2edy_A | 103 | Receptor-type tyrosine-protein phosphatase F; LAR | 97.2 | |
| 2ie4_C | 309 | PP2A-alpha;, serine/threonine-protein phosphatase | 97.06 | |
| 2z72_A | 342 | Protein-tyrosine-phosphatase; cold-active enzyme, | 97.05 | |
| 2haz_A | 105 | N-CAM 1, neural cell adhesion molecule 1; fibronec | 97.0 | |
| 1x5f_A | 120 | Neogenin; RGM binding, fibronectin type III domain | 96.99 | |
| 1x5j_A | 113 | Neogenin; RGM binding, fibronectin type III domain | 96.94 | |
| 1x4y_A | 114 | Biregional cell adhesion molecule-related/DOWN- re | 96.93 | |
| 2djs_A | 108 | Ephrin type-B receptor 1; tyrosine-protein kinase | 96.93 | |
| 1fjm_A | 330 | Protein serine/threonine phosphatase-1 (alpha ISO | 96.92 | |
| 1x4x_A | 106 | Fibronectin type-III domain containing protein 3A; | 96.9 | |
| 2ed8_A | 106 | Netrin receptor DCC; tumor suppressor protein DCC, | 96.89 | |
| 2dm4_A | 108 | Sortilin-related receptor; beta-sandwich, sorting | 96.87 | |
| 1x5l_A | 111 | Ephrin type-A receptor 8; FN3 domain, structural g | 96.76 | |
| 3icf_A | 335 | PPT, serine/threonine-protein phosphatase T; IRO m | 96.75 | |
| 2ee2_A | 119 | Contactin-1; neural cell surface protein F3, glyco | 96.7 | |
| 1x5g_A | 116 | Neogenin; RGM binding, fibronectin type III domain | 96.68 | |
| 2dle_A | 104 | Receptor-type tyrosine-protein phosphatase ETA; pr | 96.64 | |
| 2dkm_A | 104 | Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, | 96.63 | |
| 1x5a_A | 107 | Ephrin type-A receptor 1; tyrosine-protein kinase | 96.62 | |
| 2rb8_A | 104 | Tenascin; beta sheet,loop design, alternative spli | 96.58 | |
| 2e7h_A | 109 | Ephrin type-B receptor 4; FN3 domain, tyrosine- pr | 96.57 | |
| 2ed7_A | 119 | Netrin receptor DCC; tumor suppressor protein DCC, | 96.55 | |
| 3e0j_A | 476 | DNA polymerase subunit delta-2; DNA polymerase del | 96.55 | |
| 3e7a_A | 299 | PP-1A, serine/threonine-protein phosphatase PP1-al | 96.54 | |
| 1va9_A | 122 | DOWN syndrome cell adhesion molecule like- protein | 96.53 | |
| 3h63_A | 315 | Serine/threonine-protein phosphatase 5; metalloenz | 96.53 | |
| 3ll8_A | 357 | Serine/threonine-protein phosphatase 2B catalytic | 96.53 | |
| 2dmk_A | 127 | Midline 2 isoform 2; midline defect 2, tripartite | 96.5 | |
| 2dju_A | 106 | Receptor-type tyrosine-protein phosphatase F; LAR | 96.5 | |
| 1x5x_A | 109 | Fibronectin type-III domain containing protein 3A; | 96.44 | |
| 2ed9_A | 124 | Netrin receptor DCC; tumor suppressor protein DCC, | 96.42 | |
| 1x5z_A | 115 | Receptor-type tyrosine-protein phosphatase delta; | 96.41 | |
| 3n1f_C | 102 | Cell adhesion molecule-related/DOWN-regulated BY; | 96.38 | |
| 1wfo_A | 130 | Sidekick 2; FN3, cell adhesion, structural genomic | 96.38 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 96.38 | |
| 1k85_A | 88 | Chitinase A1; fibronectin type III domain, chitin | 96.3 | |
| 2edx_A | 134 | Protein tyrosine phosphatase, receptor type, F; LA | 96.27 | |
| 1aui_A | 521 | Calcineurin, serine/threonine phosphatase 2B; hydr | 96.26 | |
| 2dbj_A | 124 | Proto-oncogene tyrosine-protein kinase MER precurs | 96.21 | |
| 3b83_A | 100 | Ten-D3; beta sheet, computational redesigned prote | 96.17 | |
| 1x5h_A | 132 | Neogenin; RGM binding, fibronectin type III domain | 96.15 | |
| 1wk0_A | 137 | KIAA0970 protein; fibronectin type III domain, str | 96.1 | |
| 3tes_A | 98 | Tencon; fibronectin type III domain, FN3, consensu | 96.09 | |
| 2yuw_A | 110 | Myosin binding protein C, SLOW type; fibronectin I | 96.08 | |
| 1x3d_A | 118 | Fibronectin type-III domain containing protein 3A; | 96.03 | |
| 2cuh_A | 115 | Tenascin-X; fibronectin type III domain, extracell | 96.0 | |
| 3teu_A | 98 | Fibcon; FN3 domain, fibronectin TPYE III domain, c | 96.0 | |
| 2dlh_A | 121 | Receptor-type tyrosine-protein phosphatase delta; | 95.98 | |
| 1x4z_A | 121 | Biregional cell adhesion molecule-related/DOWN- re | 95.98 | |
| 3k2m_C | 101 | Monobody HA4; engineered binding protein, antibody | 95.95 | |
| 2kbg_A | 114 | N-CAM 2, neural cell adhesion molecule 2; fibronec | 95.95 | |
| 3p4l_A | 211 | Neogenin; iron homeostasis, hemojuvelin receptor, | 95.94 | |
| 2ic2_A | 115 | CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin t | 95.94 | |
| 2crz_A | 110 | Fibronectin type-III domain containing protein 3A; | 95.88 | |
| 1uen_A | 125 | KIAA0343 protein; immunoglobulin-like beta-sandwic | 95.85 | |
| 2e3v_A | 122 | Neural cell adhesion molecule 1, 140 kDa isoform; | 95.85 | |
| 3mpc_A | 103 | FN3-like protein; fibronectin, FN(III), unknown fu | 95.83 | |
| 2cum_A | 105 | Tenascin-X; hexabrachion-like, fibronectin type II | 95.81 | |
| 3qwq_B | 114 | Adnectin; cell surface receptor, tyrosine kinase, | 95.67 | |
| 1qr4_A | 186 | Protein (tenascin); fibronectin type-III, heparin, | 95.65 | |
| 1x5y_A | 111 | Myosin binding protein C, fast-type; fast MYBP-C, | 95.63 | |
| 2dn7_A | 107 | Receptor-type tyrosine-protein phosphatase F; LAR | 95.63 | |
| 2ocf_D | 121 | Fibronectin; estrogen receptor, LBD, monobody, est | 95.61 | |
| 2ee3_A | 108 | Collagen alpha-1(XX) chain; KIAA1510, structural g | 95.59 | |
| 2cui_A | 112 | Tenascin-X; fibronectin type III domain, extracell | 95.53 | |
| 3t04_D | 103 | Monobody 7C12; engineered binding protein, antibod | 95.48 | |
| 2crm_A | 120 | Fibronectin type-III domain containing protein 3A; | 95.41 | |
| 3f7q_A | 234 | Integrin beta-4, GP150; hemidesmosome, cell adhesi | 95.35 | |
| 3qht_C | 97 | Monobody YSMB-1; fibronectin type III, yeast small | 95.34 | |
| 1ujt_A | 120 | KIAA1568 protein; fibronectin type III domain, str | 95.32 | |
| 2yux_A | 120 | Myosin-binding protein C, SLOW-type; fibronectin I | 95.32 | |
| 2db8_A | 110 | Tripartite motif protein 9, isoform 2; ring finger | 95.18 | |
| 1bpv_A | 112 | Titin, A71, connectin; fibronectin type III; NMR { | 95.17 | |
| 1qr4_A | 186 | Protein (tenascin); fibronectin type-III, heparin, | 95.17 | |
| 1wis_A | 124 | KIAA1514 protein; FNIII domain, sidekick-2, struct | 95.15 | |
| 1tdq_A | 283 | Tenascin-R; extracellular matrix, lecticans, tenas | 95.06 | |
| 2yrz_A | 118 | Integrin beta-4; GP150, CD104 antigen, structural | 94.98 | |
| 1wfu_A | 120 | Unnamed protein product; FN3 domain, similar to 17 | 94.97 | |
| 1tdq_A | 283 | Tenascin-R; extracellular matrix, lecticans, tenas | 94.96 | |
| 2qbw_A | 195 | PDZ-fibronectin fusion protein; fibronectin PDZ, u | 94.96 | |
| 1v5j_A | 108 | KIAA1355 protein, RSGI RUH-008; FN3 domain, human | 94.93 | |
| 3r8q_A | 290 | Fibronectin; heparin, FNIII, heparin binding, cell | 94.93 | |
| 2ibg_A | 214 | CG9211-PA, GH03927P; IHOG, fibronectin type III, p | 94.9 | |
| 1uey_A | 127 | KIAA0343 protein; immunoglobulin-like beta-sandwic | 94.86 | |
| 3lpw_A | 197 | A77-A78 domain from titin; intracellular FNIII-tan | 94.84 | |
| 3r8q_A | 290 | Fibronectin; heparin, FNIII, heparin binding, cell | 94.65 | |
| 1wf5_A | 121 | Sidekick 2 protein; FNIII domain, structural genom | 94.62 | |
| 2gee_A | 203 | Hypothetical protein; fibronectin, EIIIB, cancer, | 94.6 | |
| 1j8k_A | 94 | Fibronectin; EDA, TYPEIII domain, protein binding; | 94.58 | |
| 2edb_A | 116 | Netrin receptor DCC; tumor suppressor protein DCC, | 94.57 | |
| 3l5i_A | 290 | Interleukin-6 receptor subunit beta; cytokine rece | 94.52 | |
| 3n06_B | 210 | PRL-R, prolactin receptor; PH dependence, hematopo | 94.43 | |
| 2vkw_A | 209 | Neural cell adhesion molecule 1,140 kDa isoform; a | 94.41 | |
| 1uem_A | 117 | KIAA1568 protein; immunoglobulin-like beta-sandwic | 94.3 | |
| 2gee_A | 203 | Hypothetical protein; fibronectin, EIIIB, cancer, | 94.2 | |
| 2b5i_B | 214 | Interleukin-2 receptor beta chain; four-helix bund | 94.17 | |
| 3lpw_A | 197 | A77-A78 domain from titin; intracellular FNIII-tan | 94.15 | |
| 1cfb_A | 205 | Drosophila neuroglian; neural adhesion molecule; H | 94.13 | |
| 2ha1_A | 201 | Fibronectin; beta sandwich, protein-protein comple | 94.13 | |
| 1bqu_A | 215 | Protein (GP130); cytokine receptor, glycoprotein 1 | 94.09 | |
| 3p4l_A | 211 | Neogenin; iron homeostasis, hemojuvelin receptor, | 93.63 | |
| 2ibg_A | 214 | CG9211-PA, GH03927P; IHOG, fibronectin type III, p | 93.53 | |
| 1wfn_A | 119 | Sidekick 2; FN3, cell adhesion, structural genomic | 93.5 | |
| 1uc6_A | 109 | CNTF receptor, ciliary neurotrophic factor recepto | 93.25 | |
| 3fl7_A | 536 | Ephrin receptor; ATP-binding, kinase, nucleotide-b | 93.22 | |
| 2ekj_A | 105 | Collagen alpha-1(XX) chain; KIAA1510, structural g | 93.19 | |
| 1cd9_B | 215 | G-CSF-R, protein (G-CSF receptor); class1 cytokine | 93.13 | |
| 1i1r_A | 303 | GP130, interleukin-6 receptor beta chain; cytokine | 92.97 | |
| 2vkw_A | 209 | Neural cell adhesion molecule 1,140 kDa isoform; a | 92.76 | |
| 1cfb_A | 205 | Drosophila neuroglian; neural adhesion molecule; H | 92.74 | |
| 3t1w_A | 375 | Four-domain fibronectin fragment; human fibronecti | 92.69 | |
| 2w1n_A | 238 | O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrol | 92.53 | |
| 2h41_A | 95 | Fibronectin; beta sandwich, cell adhesion, structu | 92.04 | |
| 1fnf_A | 368 | Fibronectin; RGD, extracellular matrix, cell adhes | 91.96 | |
| 3csg_A | 461 | MBP, maltose-binding protein monobody YS1 fusion, | 91.88 | |
| 1eer_B | 227 | Epobp, erythropoietin receptor; signal transductio | 91.85 | |
| 1fnf_A | 368 | Fibronectin; RGD, extracellular matrix, cell adhes | 91.72 | |
| 1x5i_A | 126 | Neogenin; RGM binding, fibronectin type III domain | 91.57 | |
| 3up1_A | 223 | Interleukin-7 receptor subunit alpha; cytokine rec | 91.47 | |
| 3t1w_A | 375 | Four-domain fibronectin fragment; human fibronecti | 91.16 | |
| 2jll_A | 389 | NCAM2, neural cell adhesion molecule 2; immunoglob | 90.94 | |
| 2d9q_B | 313 | Granulocyte colony-stimulating factor receptor; cy | 90.85 | |
| 1wj3_A | 117 | KIAA1496 protein; beta sandwich, PANG, structural | 90.77 | |
| 3mtr_A | 215 | N-CAM-1, NCAM-1, neural cell adhesion molecule 1; | 89.73 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 89.62 | |
| 3flo_A | 460 | DNA polymerase alpha subunit B; protein-protein co | 89.12 | |
| 1oww_A | 98 | FN, fibronectin first type III module, CIG; fibron | 89.05 | |
| 3f7q_A | 234 | Integrin beta-4, GP150; hemidesmosome, cell adhesi | 88.37 | |
| 2q7n_A | 488 | Leukemia inhibitory factor receptor; cytokine cell | 87.66 | |
| 3fl7_A | 536 | Ephrin receptor; ATP-binding, kinase, nucleotide-b | 87.59 | |
| 1axi_B | 236 | HGHBP, growth hormone receptor; complex (hormone-r | 86.87 | |
| 2ha1_A | 201 | Fibronectin; beta sandwich, protein-protein comple | 86.79 | |
| 1zlg_A | 680 | Anosmin 1; insulin-like growth factor receptor Cys | 86.19 | |
| 3v6o_A | 206 | Leptin receptor; receptor-antibody complex, cytoki | 86.06 | |
| 3tgx_A | 219 | Interleukin-21 receptor; class I cytokine, class I | 85.55 | |
| 2v5y_A | 731 | Receptor-type tyrosine-protein phosphatase MU; mem | 85.35 | |
| 3l5i_A | 290 | Interleukin-6 receptor subunit beta; cytokine rece | 85.33 | |
| 1bqu_A | 215 | Protein (GP130); cytokine receptor, glycoprotein 1 | 84.99 | |
| 3lqm_A | 201 | Interleukin-10 receptor subunit beta; IL-10R2, com | 84.38 | |
| 1iar_B | 207 | Protein (interleukin-4 receptor alpha chain); cyto | 84.36 | |
| 1n26_A | 325 | IL-6 receptor alpha chain; transmembrane, glycopro | 84.06 | |
| 2jll_A | 389 | NCAM2, neural cell adhesion molecule 2; immunoglob | 83.78 | |
| 4doh_B | 206 | Interleukin-20 receptor subunit beta; IL10 family | 83.46 | |
| 2b5i_C | 199 | Cytokine receptor common gamma chain; four-helix b | 83.3 | |
| 3bpo_C | 314 | Interleukin-13 receptor alpha-1 chain; IL4, IL13, | 82.12 | |
| 3e0g_A | 483 | Leukemia inhibitory factor receptor; IG domain, cy | 81.46 | |
| 1zlg_A | 680 | Anosmin 1; insulin-like growth factor receptor Cys | 81.29 | |
| 3l5h_A | 589 | Interleukin-6 receptor subunit beta; IG-like, FNII | 80.46 | |
| 2erj_C | 247 | Cytokine receptor common gamma chain; immune syste | 80.4 | |
| 2gys_A | 419 | Cytokine receptor common beta chain; dimer of inte | 80.25 |
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-67 Score=538.27 Aligned_cols=378 Identities=42% Similarity=0.723 Sum_probs=327.9
Q ss_pred CCCCCCeeEEEEecC--CCcEEEEEEeC-CCCCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCE
Q 012895 49 RSESDPQQVHISLAA--KDYIRVSWITD-DKEAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATT 125 (454)
Q Consensus 49 ~~~~~p~~v~l~~~~--~~~~~v~W~t~-~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 125 (454)
.+..+|+||||++++ .++|+|+|+|. +.++.+.|+|++.++.+...+.++.++|.+....++++|+|+|+||+|||+
T Consensus 20 ~~~~~p~~v~l~~~~~~~~~~~v~W~t~~~~~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 99 (426)
T 1xzw_A 20 SGYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKSQKRAMGTVVTYKYYNYTSAFIHHCTIKDLEYDTK 99 (426)
T ss_dssp CSTTCCEEEEEEECSSSSSCEEEEEEESSCCTTTTEEEEEETTCCCCEEEECEEECCEETTEECCEEEEEEECCCCTTCE
T ss_pred CCCCCCceEEEEECCCCCCeEEEEEEeCCCCCCCCEEEEecCCCCCceEEEEEEEEEEecCCcCCEEEEEEECCCCCCCE
Confidence 467899999999998 59999999999 877899999999988888888888777776556789999999999999999
Q ss_pred EEEEeCc--cCceeEEECCCC---CCCeEEEEEecCCCCCChHHHHHHhhcC--CCCeEeecCccccCCCC----hhhHH
Q 012895 126 YYYRCGG--RGPEFSFKMPPA---NFPIEFAIVGDLGQTEWTNSTLDHVGSK--DYDVFLLPGDLSYADFQ----QPLWD 194 (454)
Q Consensus 126 Y~Yrv~~--~s~~~~F~T~p~---~~~~~f~~igD~~~~~~~~~~l~~i~~~--~pd~vl~~GDl~y~~~~----~~~~~ 194 (454)
|+|||+. .++.++|+|+|. ..++||+++||+|.......+++++.+. +|||||++||++|.++. ..+|+
T Consensus 100 Y~Yrv~~g~~s~~~~f~T~p~~~~~~~~~f~~~gD~~~~~~~~~~l~~i~~~~~~~D~vl~~GD~~y~~~~~~~~~~~~~ 179 (426)
T 1xzw_A 100 YYYRLGFGDAKRQFWFVTPPKPGPDVPYVFGLIGDIGQTHDSNTTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWD 179 (426)
T ss_dssp EEEEECCGGGCEEEEEECCCCCCTTCCEEEEEECSCTTBHHHHHHHHHHHHCTTCCSEEEECSCCCCGGGSGGGCTHHHH
T ss_pred EEEEECCCCccceeEEECCCCCCCCCCeEEEEEEeCCCCCchHHHHHHHHhCCCCCCEEEeCCChhhcccCCcccchHHH
Confidence 9999985 578999999985 5789999999999875556788888755 99999999999997654 46799
Q ss_pred HHhhhhhhhhcCCCeeecCCCcccCCCCCC-CcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCH
Q 012895 195 SFGRLVEPYASSRPWMVTEGNHEIESIPII-LPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDS 273 (454)
Q Consensus 195 ~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~ 273 (454)
.|.+.++++.+.+|+++++||||+...+.. ....+..|.++|.||.+..+...+.||+|++|+++||+||++..+..+.
T Consensus 180 ~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~ 259 (426)
T 1xzw_A 180 TWGRFSERSVAYQPWIWTAGNHEIDYAPDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRASAHIIVLSSYSGFVKYS 259 (426)
T ss_dssp HHHHHHHHHHTTSCEECCCCGGGCCCBGGGTBCSTTHHHHHHSCCCCGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTS
T ss_pred HHHHHHHHHHhcCCEEEeccccccccCCccccccCChhheEEEeCCcccCCCCCCCeEEEEECCEEEEEeeCcccCCCCH
Confidence 999999998888999999999999754311 1235677888999997654445678999999999999999988777789
Q ss_pred HHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCC---
Q 012895 274 AQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNK--- 350 (454)
Q Consensus 274 ~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~--- 350 (454)
+|++||+++|+++++++++|+||++|+|+++....+..++..+++.|+++|.+++|+++|+||+|.|+|..|+++++
T Consensus 260 ~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~~~r~~p~~~~~~~~ 339 (426)
T 1xzw_A 260 PQYKWFTSELEKVNRSETPWLIVLVHAPLYNSYEAHYMEGEAMRAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNI 339 (426)
T ss_dssp HHHHHHHHHHHHCCTTTCCEEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCS
T ss_pred HHHHHHHHHHHhhhhcCCCEEEEEeccCceeCCCcccCCCHHHHHHHHHHHHHhCCCEEEEcChhhheeeeeecCccccc
Confidence 99999999999987657889999999999987655555666789999999999999999999999999999987765
Q ss_pred --------cCCCCcEEEEECCCCCCCCcccccCCCCCCCceeeecccCEEEEEEecCCeEEEEEEEecCCCceeeeEEEE
Q 012895 351 --------ADPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQESSFGHARLKILDETRAHWSWYRNNDSDAVIADEVRL 422 (454)
Q Consensus 351 --------~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i 422 (454)
.+++|++||++|+||+.+++...+..++|+|++|+...+||++|+|.|++++.|+|++++||+.++.|+|||
T Consensus 340 ~~g~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~dg~~~~~D~~~i 419 (426)
T 1xzw_A 340 VNAKCTPVSDESAPVYITIGDGGNSEGLASEMTQPQPSYSAFREASFGHGIFDIKNRTHAHFSWHRNQDGASVEADSLWL 419 (426)
T ss_dssp TTCCCCCEECTTSCEEEEECCSCCTTCCCCCBCSSCCTTEEEEECCCEEEEEEECSSSEEEEEEEETTSCTTCCSEEEEE
T ss_pred cCCccccccCCCccEEEEeCCCccccccccccCCCCCCceeEEecCCCeEEEEEEcCCeEEEEEEECCCCCEEEeEEEEE
Confidence 346899999999999988765567778899999999999999999999999999999999999889999999
Q ss_pred EEcC
Q 012895 423 ESLS 426 (454)
Q Consensus 423 ~~~~ 426 (454)
.|+.
T Consensus 420 ~~~~ 423 (426)
T 1xzw_A 420 LNRY 423 (426)
T ss_dssp ECSC
T ss_pred Eecc
Confidence 9974
|
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-66 Score=529.63 Aligned_cols=384 Identities=42% Similarity=0.704 Sum_probs=326.0
Q ss_pred CCCCCCeeEEEEecC--CCcEEEEEEeCCCCCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEE
Q 012895 49 RSESDPQQVHISLAA--KDYIRVSWITDDKEAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 49 ~~~~~p~~v~l~~~~--~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 126 (454)
.+...|+||||++++ .++|+|+|.|.+.++.+.|+|++.++.+..++.|+.++|.+....++++|+|.|+||+|||+|
T Consensus 14 ~~~~~P~~v~l~~~~~~~~~~~v~W~t~~~~~~~~V~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 93 (424)
T 2qfp_A 14 PGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGKMSTYRFFNYSSGFIHHTTIRKLKYNTKY 93 (424)
T ss_dssp CSTTCCEEEEEEECSSSSSCEEEEEEESSSCCCCCEEEEESSSCCCEEECCEEECCBCSSCBCCEEEEEEECSCCTTCEE
T ss_pred CCCCCCceEEEEecCCCCCeEEEEEECCCCCCCCEEEEEeCCCCCceEEEEEEEEEEecCCCCCEEEEEEECCCCCCCEE
Confidence 356789999999998 589999999987778899999999888888888887777765567899999999999999999
Q ss_pred EEEeCc--cCceeEEECCCC---CCCeEEEEEecCCCCCChHHHHHHhhcC--CCCeEeecCccccCCCC----hhhHHH
Q 012895 127 YYRCGG--RGPEFSFKMPPA---NFPIEFAIVGDLGQTEWTNSTLDHVGSK--DYDVFLLPGDLSYADFQ----QPLWDS 195 (454)
Q Consensus 127 ~Yrv~~--~s~~~~F~T~p~---~~~~~f~~igD~~~~~~~~~~l~~i~~~--~pd~vl~~GDl~y~~~~----~~~~~~ 195 (454)
+|||+. .++.++|+|+|. ..++||+++||+|.......+++.+.+. +|||||++||++|.++. ...|+.
T Consensus 94 ~Yrv~~~~~s~~~~f~T~p~~~~~~~~~f~~igD~~~~~~~~~~l~~~~~~~~~~D~vl~~GDl~y~~~~~~~~~~~~~~ 173 (424)
T 2qfp_A 94 YYEVGLRNTTRRFSFITPPQTGLDVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDT 173 (424)
T ss_dssp EEEECCSSSCEEEEEECCCCCCTTCCEEEEEECSCTTBHHHHHHHHHHHTCSSCCCEEEECSCCSCGGGSGGGCTHHHHH
T ss_pred EEEECCCCccceEEEECCCCCCCCCCeEEEEEEeCCCCCChHHHHHHHHhCCCCCCEEEEcCccccccccccccchHHHH
Confidence 999986 478899999985 4689999999999875555677877654 99999999999997653 357888
Q ss_pred HhhhhhhhhcCCCeeecCCCcccCCCCCC-CcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCHH
Q 012895 196 FGRLVEPYASSRPWMVTEGNHEIESIPII-LPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSA 274 (454)
Q Consensus 196 ~~~~~~~l~~~~P~~~v~GNHD~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~ 274 (454)
|.++++++.+.+|+++++||||+...+.. ....+..|.++|.+|........+.||+|++|+++||+||++..+..+.+
T Consensus 174 ~~~~l~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~ 253 (424)
T 2qfp_A 174 WGRFTERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTP 253 (424)
T ss_dssp HHHHHHHHHTTSCEEECCCHHHHCCBGGGTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSH
T ss_pred HHHHHHHHHhcCCeEeecCCcccccCCcccccccchhhhhhccCCccccCCCCCcEEEEEECCEEEEEecCCccCCCcHH
Confidence 88889988888999999999999643221 11256778889999875444456789999999999999999877766789
Q ss_pred HHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCC----
Q 012895 275 QYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNK---- 350 (454)
Q Consensus 275 Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~---- 350 (454)
|++||+++|++.++++++|+||++|+|+++....+..++..+++.|+++|.+++|+++|+||+|.|+|..++++..
T Consensus 254 Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~ 333 (424)
T 2qfp_A 254 QYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKIT 333 (424)
T ss_dssp HHHHHHHHHHHCCTTTCCEEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSS
T ss_pred HHHHHHHHHhhhcccCCCEEEEEeCcCceecCcccccccHHHHHHHHHHHHHhCCcEEEECChhhhheeccccCcceecc
Confidence 9999999999987656789999999999987554444556788999999999999999999999999999876532
Q ss_pred -------cCCCCcEEEEECCCCCCCCcccccCCCCCCCceeeecccCEEEEEEecCCeEEEEEEEecCCCceeeeEEEEE
Q 012895 351 -------ADPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQESSFGHARLKILDETRAHWSWYRNNDSDAVIADEVRLE 423 (454)
Q Consensus 351 -------~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i~ 423 (454)
.++++++||++|+||+.+++...+..++|+|++|++..|||++|++.|.+++.|+|++++||+.++.|+|||.
T Consensus 334 ~g~~~~~~~~~~~vyi~~G~gg~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~~g~~~~~D~~~i~ 413 (424)
T 2qfp_A 334 NGLCTPVKDQSAPVYITIGDAGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFF 413 (424)
T ss_dssp SCCCSCEECTTSCEEEEECCSCTTSCCCCCBCSSCCTTEEEEECCCEEEEEEECSSSEEEEEEEETTSCTTCCSEEEEEE
T ss_pred CCccccccCCCCcEEEEecCCCCccccCccCCCCCCCcceEEecCCCEEEEEEEcCcEEEEEEEECCCCCEEeeeEEEEE
Confidence 2467999999999999987755677788999999999999999999999999999999999997778999999
Q ss_pred EcCCCCCCC
Q 012895 424 SLSTSKQCW 432 (454)
Q Consensus 424 ~~~~~~~~~ 432 (454)
|+...+.|.
T Consensus 414 ~~~~~~~~~ 422 (424)
T 2qfp_A 414 NRHWYPVDD 422 (424)
T ss_dssp CTTTCCCCC
T ss_pred ecccccccc
Confidence 997766664
|
| >2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-38 Score=329.64 Aligned_cols=348 Identities=20% Similarity=0.216 Sum_probs=236.3
Q ss_pred CeeEEEEecC-CCcEEEEEEeCCC-----------CCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCC
Q 012895 54 PQQVHISLAA-KDYIRVSWITDDK-----------EAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLE 121 (454)
Q Consensus 54 p~~v~l~~~~-~~~~~v~W~t~~~-----------~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~ 121 (454)
|....|++|+ .....|.|.+... +....+++.+++.+.+..+.|...+.. ..+++|+|.|+||+
T Consensus 8 ~f~~GvasGDp~~~~vilWtr~~p~~~~~~~~~~~~~~v~~eva~d~~f~~~v~~g~~~a~~----~~~~t~~v~v~gL~ 83 (527)
T 2yeq_A 8 PFTLGVASGDPLSDSVVLWTRLAPDPLNGGGMPKQAVPVKWEVAKDEHFRKIVRKGTEMAKP----SLAHSVHVEADGLE 83 (527)
T ss_dssp SCTTCEEEECCCSSCEEEEEECCSBGGGTBCCCSSCEEEEEEEESSTTSSSEEEEEEEEECG----GGTTEEEEEECSCC
T ss_pred CccccccccCCCCCeEEEEEecCCcccCCCCCCCCceEEEEEEecCCccccceEeeeEEecC----CCceEEEeecCCcC
Confidence 3334499999 4444588999842 123344555556666677777655443 67899999999999
Q ss_pred CCCEEEEEeCc---cCceeEEECCCC----CCCeEEEEEecCCCCCChHHHHHHhhcCCCCeEeecCccccCCCChh---
Q 012895 122 PATTYYYRCGG---RGPEFSFKMPPA----NFPIEFAIVGDLGQTEWTNSTLDHVGSKDYDVFLLPGDLSYADFQQP--- 191 (454)
Q Consensus 122 p~t~Y~Yrv~~---~s~~~~F~T~p~----~~~~~f~~igD~~~~~~~~~~l~~i~~~~pd~vl~~GDl~y~~~~~~--- 191 (454)
|||+|+|||.. .+.+++|+|+|. ..++||+++||.+.......++++|.+.+||||||+||++|++....
T Consensus 84 P~t~Y~Yr~~~~~~~S~~g~frT~P~~~~~~~~~rfa~~sc~~~~~g~~~~~~~ia~~~~D~vlhlGD~iY~d~~~~~~~ 163 (527)
T 2yeq_A 84 PNKVYYYRFKTGHELSPVGKTKTLPAPGANVPQMTFAFASCQQYEHGYYTAYKHMAKEKLDLVFHLGDYIYEYGPNEYVS 163 (527)
T ss_dssp TTCEEEEEEEETTEECCCEEEECCCCTTCCCCCEEEEEECCCCGGGCCCHHHHHHTTSCCSEEEECSCSSCCCCTTSSCC
T ss_pred CCCEEEEEEEeCCCcCCCceEEcCCCCCCCCCCeEEEEEecCCCCCCccHHHHHHHhcCCCEEEecCCcccCCCCCcccc
Confidence 99999999975 478899999987 26899999999986544457888888889999999999999875421
Q ss_pred ---------------------hHHHHh--hhhhhhhcCCCeeecCCCcccCCCCCCC--c-----chh-----hhhhhhc
Q 012895 192 ---------------------LWDSFG--RLVEPYASSRPWMVTEGNHEIESIPIIL--P-----HAF-----KAYNARW 236 (454)
Q Consensus 192 ---------------------~~~~~~--~~~~~l~~~~P~~~v~GNHD~~~~~~~~--~-----~~~-----~~~~~~~ 236 (454)
.|..+. ..++.+.+.+|+++++||||+.++.... . ..| .+++.+|
T Consensus 164 ~~~~~R~~~~~e~~tl~~yr~~y~~~~~dp~lq~~~a~~P~i~~wDDHE~~nn~~~~~~~~~~~~~~f~~rr~~A~~ay~ 243 (527)
T 2yeq_A 164 KTGNVRTHNSAEIITLQDYRNRHAQYRSDANLKAAHAAFPWVVTWDDHEVENNYANKIPEKGQSVEAFVLRRAAAYQAYY 243 (527)
T ss_dssp TTCCCSCCSSSSCCSHHHHHHHHHHHHTCHHHHHHHHHSEEEECCCSTTTSTTCBTTBCSTTCCHHHHHHHHHHHHHHHH
T ss_pred cccccccCCcccccCHHHHHHHHHHHhCCHHHHHHHhcCCEEEecccccccCCCCCCcccccCCcccHHHHHHHHHHHHH
Confidence 111111 2356667789999999999997652210 0 001 1233333
Q ss_pred -cCCCCC----CCCCCCceEEEEeCe-EEEEEecccCCC----------------------CCCHHHHHHHHHHHHhhcc
Q 012895 237 -LMPYEE----SGSSSNLYYSFDIAG-AHIIMLGSYTDF----------------------DEDSAQYKWLKADLAKINR 288 (454)
Q Consensus 237 -~~p~~~----~~~~~~~~ys~~~g~-v~fi~Lds~~~~----------------------~~~~~Q~~WL~~~L~~~~~ 288 (454)
.||... .+.....||+|++|+ ++||+||++... ..+.+|++||+++|+++
T Consensus 244 e~~P~~~~~~p~~~~~~~y~sf~~G~lv~~i~LDtR~yr~~~~~~~~~~~~~~~~~~~~~~~lG~~Q~~WL~~~L~~s-- 321 (527)
T 2yeq_A 244 EHMPLRISSLPNGPDMQLYRHFTYGNLASFNVLDTRQYRDDQANNDGNKPPSDESRNPNRTLLGKEQEQWLFNNLGSS-- 321 (527)
T ss_dssp HHSCCCGGGCCBTTBCCCCEEEEETTTEEEEECCSSSSCCCCGGGSSEECCCHHHHCTTCCSSCHHHHHHHHHHHHHC--
T ss_pred HhCCCCcccCCCCCCceEEEEEEcCCcceEEEEeccccccccccccccccccccccCCcccccCHHHHHHHHHHHhcC--
Confidence 244321 122347899999999 999999995421 14689999999999986
Q ss_pred CCCCeEEEEEccccccCCCCC--------CC--CcHHHHHHHHHHHHhcCCc--EEEecccccceeeecccCCCcCCC--
Q 012895 289 KKTPWIFVLLHAPWYNTNTAH--------QG--EGESMRNSMEELLYNARVD--VVFAGHVHAYERFTRIYDNKADPC-- 354 (454)
Q Consensus 289 ~~~~w~Iv~~H~P~~~~~~~~--------~~--~~~~~~~~l~~ll~~~~v~--lvl~GH~H~y~r~~~~~~~~~~~~-- 354 (454)
+++|+||+.|+|++...... .. .....|++|.++|.+++|+ ++|+||+|.+++...... ..++.
T Consensus 322 -~a~W~Iv~s~~p~~~~~~~~g~~~~~~~D~W~g~~~~R~~Ll~~l~~~~v~n~vvLsGDvH~~~~~~~~~~-~~~p~~~ 399 (527)
T 2yeq_A 322 -TAHWNVLAQQIFFAKWNFGTSASPIYSMDSWDGYPAQRERVINFIKSKNLNNVVVLTGDVHASWASNLHVD-FEKTSSK 399 (527)
T ss_dssp -CSSEEEEECSSCCSCCCSSCSSSCCEETTSGGGSHHHHHHHHHHHHHTTCCCEEEEECSSSSEEEEEEESS-TTCTTSC
T ss_pred -CCCeEEEEeCCcccccccCCCcccccCccchhccHHHHHHHHHHHHHhCCCCEEEEEcchHHHhHhhcccc-ccCCCCC
Confidence 67899999999998754211 00 1135799999999999984 999999999998753221 11222
Q ss_pred --CcEEEEECC--CCCCCCcc---cccCCCCCCCceeeecccCEEEEEEecCCeEEEEEEEecC
Q 012895 355 --GPIYITIGD--GGNREGLA---LEFKEPKSPLSMFQESSFGHARLKILDETRAHWSWYRNND 411 (454)
Q Consensus 355 --g~~yi~~G~--gG~~~~~~---~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~~~~~~~~~~d 411 (454)
++-+++++. ||....+. ..+...+|+ ..|.+...||..|+| +.+.++.+|+..++
T Consensus 400 ~~~~ef~~ssi~s~~~g~~~~~~~~~~~~~np~-~~~~~~~~Gy~~v~v-t~~~~~~~~~~v~~ 461 (527)
T 2yeq_A 400 IFGAEFVGTSITSGGNGADKRADTDQILKENPH-IQFFNDYRGYVRCTV-TPHQWKADYRVMPF 461 (527)
T ss_dssp EEEEEEECCCSSTTCSCBSBCTTHHHHHHHCTT-EEEEEBCEEEEEEEE-ETTEEEEEEEEESC
T ss_pred ceEEEEEcCCeeCCCCcccchhhhhhhhhcCCc-ceeeeCCCCEEEEEE-eccEEEEEEEEeCC
Confidence 344443322 11110000 011123455 345557889999998 55799999987765
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-35 Score=286.81 Aligned_cols=251 Identities=16% Similarity=0.258 Sum_probs=184.4
Q ss_pred CCeEEEEEecCCCCCChHHH-----HHHhhcCCCCeEeecCccccCCCC---hhhHHH-Hhhhhhhh--hcCCCeeecCC
Q 012895 146 FPIEFAIVGDLGQTEWTNST-----LDHVGSKDYDVFLLPGDLSYADFQ---QPLWDS-FGRLVEPY--ASSRPWMVTEG 214 (454)
Q Consensus 146 ~~~~f~~igD~~~~~~~~~~-----l~~i~~~~pd~vl~~GDl~y~~~~---~~~~~~-~~~~~~~l--~~~~P~~~v~G 214 (454)
..+||+++||+|.+...+.. .+.+++.+|||||++||++|.+.. ..+|.. |.+..+.+ ...+||++++|
T Consensus 2 ~~l~f~~igD~g~g~~~q~~va~~m~~~~~~~~pd~vl~~GD~~y~G~~~~~d~~~~~~f~~~~~~~~~~~~~P~~~vlG 81 (342)
T 3tgh_A 2 CQLRFASLGDWGKDTKGQILNAKYFKQFIKNERVTFIVSPGSNFIDGVKGLNDPAWKNLYEDVYSEEKGDMYMPFFTVLG 81 (342)
T ss_dssp CCEEEEECCSCBSCCHHHHHHHHHHHHHHHHTTCCEEEECSCSBTTCCCSTTCTHHHHHTTTTSCCGGGTTCSEEEECCC
T ss_pred ceEEEEEEecCCCCCchHHHHHHHHHHHHhhcCCCEEEECCCcccCCCCcCccHHHHHHHHHHhhhhhhhhCCCEEEeCC
Confidence 57999999999976544322 223346899999999999998432 345644 33333333 23599999999
Q ss_pred CcccCCCCCCCcchh-------------------hhhhhhccCCCCCCCCCCCceEEE----Ee---------C----eE
Q 012895 215 NHEIESIPIILPHAF-------------------KAYNARWLMPYEESGSSSNLYYSF----DI---------A----GA 258 (454)
Q Consensus 215 NHD~~~~~~~~~~~~-------------------~~~~~~~~~p~~~~~~~~~~~ys~----~~---------g----~v 258 (454)
|||+..+..... .+ .....+|.||. .||++ .. | .+
T Consensus 82 NHD~~~~~~aq~-~~~~~~~~~~~~~~~~~~~~~~~~~~rw~~P~--------~yY~~~~~f~~~~~~~~~~~g~~~~~v 152 (342)
T 3tgh_A 82 TRDWTGNYNAQL-LKGQGIYIEKNGETSIEKDADATNYPKWIMPN--------YWYHYFTHFTVSSGPSIVKTGHKDLAA 152 (342)
T ss_dssp HHHHTSCHHHHH-HHHHC---------------CCCSSCEEECSS--------SSEEEEEEEEEC---------CEEEEE
T ss_pred CCccCCCchHhh-hhhhcccccccccccccccccccCCCCccCCc--------ceEEEEEEeeccccccccccCCCCceE
Confidence 999976532110 11 11335677774 57764 32 3 39
Q ss_pred EEEEecccCCCC----------CCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcC
Q 012895 259 HIIMLGSYTDFD----------EDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNAR 328 (454)
Q Consensus 259 ~fi~Lds~~~~~----------~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~ 328 (454)
+||+|||..... ...+|++||+++|+ +++|+||++|||+|+.... +....+++.|+++|.+++
T Consensus 153 ~fi~LDT~~l~~~~~~~~~~~~~~~~Ql~WLe~~L~-----~~~~~IV~~HhP~~~~~~~--~~~~~l~~~l~~ll~~~~ 225 (342)
T 3tgh_A 153 AFIFIDTWVLSSNFPYKKIHEKAWNDLKSQLSVAKK-----IADFIIVVGDQPIYSSGYS--RGSSYLAYYLLPLLKDAE 225 (342)
T ss_dssp EEEECCTTTTSTTCSCHHHHHHHHHHHHHHHHHHHH-----HCSEEEEECSSCSSCSSTT--CCCHHHHHHTHHHHHHTT
T ss_pred EEEEEeCcccccCCcccccchHHHHHHHHHHHHhhc-----cCCcEEEEECCCCCCCCCC--CCcHHHHHHHHHHHHHcC
Confidence 999999964221 12589999999994 2479999999999987642 334567899999999999
Q ss_pred CcEEEecccccceeeecccCCCcCCCCcEEEEECCCCCCCCcccccCCCCCCCceeeecccCEEEEEEecCCeEEEEEEE
Q 012895 329 VDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQESSFGHARLKILDETRAHWSWYR 408 (454)
Q Consensus 329 v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~~~~~~~~ 408 (454)
|+++|+||+|.|++..+ .|+.||++|+||...+. .. ..++|+.|+...+||..+++ +.+.+.++|+.
T Consensus 226 VdlvlsGH~H~~~~~~~--------~g~~~iv~Ga~g~~~~~--~~--~~~~~s~f~~~~~Gf~~l~v-~~~~l~~~~~~ 292 (342)
T 3tgh_A 226 VDLYISGHDNNMEVIED--------NDMAHITCGSGSMSQGK--SG--MKNSKSLFFSSDIGFCVHEL-SNNGIVTKFVS 292 (342)
T ss_dssp CCEEEECSSSSEEEEEE--------TTEEEEEECCSSCCCCC--CS--SCCTTEEEEECSSEEEEEEE-ETTEEEEEEEE
T ss_pred CCEEEECCCcceeEEee--------CCcEEEEeCcccccccc--CC--CCCCcceeecCCCcEEEEEE-ECCEEEEEEEE
Confidence 99999999999999874 47999999998875421 11 23567899989999999998 45799999998
Q ss_pred ecCCCceeeeEEEEEEcCC
Q 012895 409 NNDSDAVIADEVRLESLST 427 (454)
Q Consensus 409 ~~dg~~~~~D~~~i~~~~~ 427 (454)
+.+|+ ++|+|+|.|+..
T Consensus 293 ~~~G~--vld~~~i~k~~~ 309 (342)
T 3tgh_A 293 SKKGE--VIYTHKLNIKKK 309 (342)
T ss_dssp TTTTE--EEEEEEEECCCC
T ss_pred CCCCc--EEEEEEEECCCC
Confidence 67887 999999999854
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=2e-31 Score=258.97 Aligned_cols=261 Identities=20% Similarity=0.291 Sum_probs=175.3
Q ss_pred CCCCCCCeEEEEEecCCCCCCh----------HHHHHH-hhcCCCCeEeecCccccCCCCh----hhHHHH-hhhhhhhh
Q 012895 141 MPPANFPIEFAIVGDLGQTEWT----------NSTLDH-VGSKDYDVFLLPGDLSYADFQQ----PLWDSF-GRLVEPYA 204 (454)
Q Consensus 141 T~p~~~~~~f~~igD~~~~~~~----------~~~l~~-i~~~~pd~vl~~GDl~y~~~~~----~~~~~~-~~~~~~l~ 204 (454)
|+| ..++||+++||+|..... .+.+.. ++..+|||||++||++|..+.. .+|... .+.+....
T Consensus 1 t~~-~~~~~~~~isD~h~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~ 79 (313)
T 1ute_A 1 TAP-TPILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPS 79 (313)
T ss_dssp --C-CCCEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGG
T ss_pred CCC-CCceEEEEEcccCCCCCccccCchHHHHHHHHHHHHHhcCCCEEEECCCccCcCCCCCcchHHHHHHHHHHcCchh
Confidence 445 578999999999986421 122333 3467999999999999865432 233222 22222111
Q ss_pred c-CCCeeecCCCcccCCCCCCCcchhhhhhhhccCCCCCCCCCCCceEEEEe------CeEEEEEecccCC---------
Q 012895 205 S-SRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDI------AGAHIIMLGSYTD--------- 268 (454)
Q Consensus 205 ~-~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~------g~v~fi~Lds~~~--------- 268 (454)
. .+|+++++||||+..+... ...+.....+|.+| ..||++.+ ++++||+||+...
T Consensus 80 l~~~p~~~v~GNHD~~~~~~~-~~~~~~~~~~~~~~--------~~~y~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~ 150 (313)
T 1ute_A 80 LRNVPWHVLAGNHDHLGNVSA-QIAYSKISKRWNFP--------SPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVS 150 (313)
T ss_dssp GTTCCEEECCCHHHHHSCHHH-HHHGGGTSTTEECC--------SSSEEEEEECTTSSCEEEEEECCHHHHHCCGGGSTT
T ss_pred hcCCCEEEECCCCccCCCccc-cccccccCCCccCc--------ccceEEEEecCCCCceEEEEEEEChHHhCcCccccc
Confidence 2 5899999999998532110 00111122344444 46888887 4899999998531
Q ss_pred --------CCCCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccc
Q 012895 269 --------FDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAY 340 (454)
Q Consensus 269 --------~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y 340 (454)
.....+|++||++.|++.. .+|+|+++|+|++..... .....+++.|.++|.+++|+++|+||+|.+
T Consensus 151 ~~~~~~~~~~~~~~q~~wL~~~L~~~~---~~~~iv~~H~p~~~~~~~--~~~~~~~~~l~~~l~~~~v~~~l~GH~H~~ 225 (313)
T 1ute_A 151 QQPERPRNLALARTQLAWIKKQLAAAK---EDYVLVAGHYPVWSIAEH--GPTHCLVKQLLPLLTTHKVTAYLCGHDHNL 225 (313)
T ss_dssp CSCCSCSCHHHHHHHHHHHHHHHHHCC---CSEEEEECSSCSSCCSSS--CCCHHHHHHTHHHHHHTTCSEEEECSSSSE
T ss_pred cccCCccccchHHHHHHHHHHHHHhCC---CCeEEEEECCCCccCCCC--CCcHHHHHHHHHHHHHcCCcEEEECChhhh
Confidence 0124799999999999873 479999999999876542 223356788999999999999999999999
Q ss_pred eeeecccCCCcCCCCcEEEEECCCCCCCCcccccCCCCCCCceeeec----ccCEEEEEEecCCeEEEEEEEecCCCcee
Q 012895 341 ERFTRIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQES----SFGHARLKILDETRAHWSWYRNNDSDAVI 416 (454)
Q Consensus 341 ~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~----~~G~~~l~v~~~~~~~~~~~~~~dg~~~~ 416 (454)
++..+ .+|+.||++|++|............++.+..|... ..||.+|++ +.+.+.++|+.. +|+ +
T Consensus 226 ~~~~~-------~~g~~~i~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gy~~l~v-~~~~~~~~~~~~-~g~--~ 294 (313)
T 1ute_A 226 QYLQD-------ENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVEI-TPKEMSVTYIEA-SGK--S 294 (313)
T ss_dssp EEEEC-------TTCCEEEEECBSSCCCCCCTTGGGSCTTCEEEEECCTTSCCEEEEEEE-CSSCEEEEEEET-TSC--E
T ss_pred hhccC-------CCCceEEEECCCcCcCccccccccCCCcccceeccCcCCCCceEEEEE-EcCEEEEEEEcC-CCc--E
Confidence 88763 35889999999886432111000111233445433 379999998 456899999985 776 8
Q ss_pred eeEEEEEEcCC
Q 012895 417 ADEVRLESLST 427 (454)
Q Consensus 417 ~D~~~i~~~~~ 427 (454)
+|+|+|.|...
T Consensus 295 ~~~~~l~~~~~ 305 (313)
T 1ute_A 295 LFKTKLPRRAR 305 (313)
T ss_dssp EEEEEECCCC-
T ss_pred EEEEEeccccC
Confidence 99999998754
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A | Back alignment and structure |
|---|
Probab=99.92 E-value=4.1e-24 Score=209.29 Aligned_cols=238 Identities=16% Similarity=0.155 Sum_probs=161.3
Q ss_pred CCCeEEEEEecCCCCCC-------------hHHHHHHhhc--CCCCeEeecCccccCCCChhhHHHHhhhhhhhhc--CC
Q 012895 145 NFPIEFAIVGDLGQTEW-------------TNSTLDHVGS--KDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYAS--SR 207 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~-------------~~~~l~~i~~--~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~--~~ 207 (454)
..++||+++||+|.... ..++++.+.+ .++|+||++||+++.+. ...|+.+.+.++++.. .+
T Consensus 23 ~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~~~-~~~~~~~~~~l~~l~~~~~~ 101 (330)
T 3ib7_A 23 RPDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGE-PAAYRKLRGLVEPFAAQLGA 101 (330)
T ss_dssp CCSEEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTTCC-HHHHHHHHHHHHHHHHHHTC
T ss_pred CCCeEEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCC-HHHHHHHHHHHHHHHhhcCC
Confidence 67899999999997422 1235566655 79999999999997654 3566677777776643 58
Q ss_pred CeeecCCCcccCCCCCCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCC----CCCCHHHHHHHHHHH
Q 012895 208 PWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTD----FDEDSAQYKWLKADL 283 (454)
Q Consensus 208 P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~----~~~~~~Q~~WL~~~L 283 (454)
|+++++||||+. ..+....... + ......+|.+++++++|++||+... .....+|++||++.|
T Consensus 102 pv~~v~GNHD~~-------~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~q~~wl~~~l 168 (330)
T 3ib7_A 102 ELVWVMGNHDDR-------AELRKFLLDE--A----PSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLGWLAEEL 168 (330)
T ss_dssp EEEECCCTTSCH-------HHHHHHHHCC--C----CCCSCCCEEEEETTEEEEECCCCCTTCCSBCCCHHHHHHHHHHT
T ss_pred CEEEeCCCCCCH-------HHHHHHhccc--c----cccCCcceEEEeCCEEEEEecCCCCCCCCCccCHHHHHHHHHHH
Confidence 999999999983 1222211111 1 1123578999999999999998642 124689999999999
Q ss_pred HhhccCCCCeEEEEEccccccCCCCCCC-CcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCCcCCCCcEEEEEC
Q 012895 284 AKINRKKTPWIFVLLHAPWYNTNTAHQG-EGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIG 362 (454)
Q Consensus 284 ~~~~~~~~~w~Iv~~H~P~~~~~~~~~~-~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G 362 (454)
+.... ..+|+++|||++........ .....++.|.+++.+++++++|+||+|..+... .+|+.+++.|
T Consensus 169 ~~~~~---~~~iv~~Hh~p~~~~~~~~~~~~~~~~~~l~~~l~~~~v~~v~~GH~H~~~~~~--------~~g~~~~~~g 237 (330)
T 3ib7_A 169 ATPAP---DGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNAT--------FVGIPVSVAS 237 (330)
T ss_dssp TSCCT---TCEEEECSSCSSCCSSGGGGGGSBSCHHHHHHHHTTSSEEEEEECSSSSCEEEE--------ETTEEEEECC
T ss_pred Hhccc---CCeEEEEECCCCCCCccccccccccCHHHHHHHHhccCceEEEECCCCCcccce--------ECCEEEEecC
Confidence 88743 23789999998765322110 011235789999999999999999999977543 1477787777
Q ss_pred CCCCCCCcccccCCCCCCCceeeecccCEEEEEEecCCeEEEEEEEecCCC
Q 012895 363 DGGNREGLALEFKEPKSPLSMFQESSFGHARLKILDETRAHWSWYRNNDSD 413 (454)
Q Consensus 363 ~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~~~~~~~~~~dg~ 413 (454)
+.+... ....+ ...........||..|++. ...+.++++..+.+.
T Consensus 238 s~~~~~----~~~~~-~g~~~~~~~~~gy~iv~i~-~~~~~~~~v~~~~~~ 282 (330)
T 3ib7_A 238 ATCYTQ----DLTVA-AGGTRGRDGAQGCNLVHVY-PDTVVHSVIPLGGGE 282 (330)
T ss_dssp CSSCEE----CTTSC-TTCCCEESCSCEEEEEEEC-SSCEEEEEEECSCCC
T ss_pred cceecc----CCCCC-CcceeccCCCCceEEEEEE-CCCeEEEEeccCCCC
Confidence 665421 11111 1111223345689999985 457888998865543
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.6e-22 Score=192.54 Aligned_cols=232 Identities=12% Similarity=0.117 Sum_probs=151.0
Q ss_pred eEEEEEecCCCCCC-------------hHHHHHHhhc--CCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeec
Q 012895 148 IEFAIVGDLGQTEW-------------TNSTLDHVGS--KDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVT 212 (454)
Q Consensus 148 ~~f~~igD~~~~~~-------------~~~~l~~i~~--~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v 212 (454)
+||++++|+|.... ..++++.+++ .++|+||++||+++.+. ...|+.+.+.++.+ .+|++++
T Consensus 1 mri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~~~-~~~~~~~~~~l~~l--~~p~~~v 77 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGR-PEEYQVARQILGSL--NYPLYLI 77 (274)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCC-HHHHHHHHHHHTTC--SSCEEEE
T ss_pred CEEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCC-HHHHHHHHHHHHhc--CCCEEEE
Confidence 68999999998641 1234555554 37899999999998554 34566666666554 4899999
Q ss_pred CCCcccCCCCCCCcchhh-hhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCC----CCCCHHHHHHHHHHHHhhc
Q 012895 213 EGNHEIESIPIILPHAFK-AYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTD----FDEDSAQYKWLKADLAKIN 287 (454)
Q Consensus 213 ~GNHD~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~----~~~~~~Q~~WL~~~L~~~~ 287 (454)
+||||... .+. .+...| ++.... .+..+|.++.++++|++||+... .....+|++||++.|++.
T Consensus 78 ~GNHD~~~-------~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~i~ld~~~~~~~~~~~~~~~~~wl~~~l~~~- 146 (274)
T 3d03_A 78 PGNHDDKA-------LFLEYLQPLC-PQLGSD--ANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEAQLFEG- 146 (274)
T ss_dssp CCTTSCHH-------HHHHHHGGGS-GGGCSC--GGGCCEEECSSSSEEEECCCCCTTCSSBCCCHHHHHHHHHHHHHH-
T ss_pred CCCCCCHH-------HHHHHhhhhh-cCcccC--CCceEEEEEeCCEEEEEEeCCCCCCCCCeeCHHHHHHHHHHHHhC-
Confidence 99999831 111 121111 111000 01357889999999999998642 224689999999999986
Q ss_pred cCCCCeEEEEEccccccCCCCCCC-CcHHHHHHHHHHHHhc-CCcEEEecccccceeeecccCCCcCCCCcEEEEECCCC
Q 012895 288 RKKTPWIFVLLHAPWYNTNTAHQG-EGESMRNSMEELLYNA-RVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGG 365 (454)
Q Consensus 288 ~~~~~w~Iv~~H~P~~~~~~~~~~-~~~~~~~~l~~ll~~~-~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG 365 (454)
+..++|+++|+|++.....+.. ......+.+.+++.++ +++++|+||+|..+.... .|+.++++++.+
T Consensus 147 --~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~~~--------~g~~~~~~pg~~ 216 (274)
T 3d03_A 147 --GDKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMTQY--------RQALISTLPGTV 216 (274)
T ss_dssp --TTSCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEEEE--------TTEEEEECCCSS
T ss_pred --CCCCEEEEECCCCcccCCcccCcccCcCHHHHHHHHHhCCCceEEEeCCCCCchhheE--------CCEEEEEcCCcc
Confidence 2346999999999875432111 0112356888999998 899999999999776541 354455444332
Q ss_pred CCCCcccccCCCCCCC-ceeeecccCEEEEEEecCCeEEEEEEEec
Q 012895 366 NREGLALEFKEPKSPL-SMFQESSFGHARLKILDETRAHWSWYRNN 410 (454)
Q Consensus 366 ~~~~~~~~~~~~~p~~-~~~~~~~~G~~~l~v~~~~~~~~~~~~~~ 410 (454)
.... .. .+.+ ..+.....||..+++.+ ..+.+++++..
T Consensus 217 ~~~~----~~--~~~~~~~~~~~~~gy~i~~i~~-~~~~~~~~~~~ 255 (274)
T 3d03_A 217 HQVP----YC--HADTDPYYDLSPASCLMHRQVG-EQWVSYQHSLA 255 (274)
T ss_dssp CBCC----CC--SSCCSCEEBCCCCEEEEEEEET-TEEEEEEEECS
T ss_pred eeec----cC--CCccccccccCCCceEEEEEeC-CcEEEEEEecC
Confidence 2111 11 1111 23444567999999865 47888888764
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 | Back alignment and structure |
|---|
Probab=99.89 E-value=2.4e-22 Score=195.43 Aligned_cols=225 Identities=16% Similarity=0.155 Sum_probs=146.6
Q ss_pred CCCeEEEEEecCCCCCCh--------------------HHHHHHhhcCCCCeEeecCccccCCCCh--hhHHHHhhhhhh
Q 012895 145 NFPIEFAIVGDLGQTEWT--------------------NSTLDHVGSKDYDVFLLPGDLSYADFQQ--PLWDSFGRLVEP 202 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~~--------------------~~~l~~i~~~~pd~vl~~GDl~y~~~~~--~~~~~~~~~~~~ 202 (454)
...+||++++|+|..... .++++.+.+.+||+||++||+++..... ..++.+...++.
T Consensus 3 ~~~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GD~~~~~~~~~~~~~~~~~~~~~~ 82 (322)
T 2nxf_A 3 DPVFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAE 82 (322)
T ss_dssp CCSEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHH
T ss_pred CCceEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccCCCCCcchHHHHHHHHHHHH
Confidence 357999999999986521 2344455568999999999999854311 013333334444
Q ss_pred hhc-CCCeeecCCCcccCCCCCCCcchhhhhhhhcc-------------CCCCCCCCCCCceEEEEe-CeEEEEEecccC
Q 012895 203 YAS-SRPWMVTEGNHEIESIPIILPHAFKAYNARWL-------------MPYEESGSSSNLYYSFDI-AGAHIIMLGSYT 267 (454)
Q Consensus 203 l~~-~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~-------------~p~~~~~~~~~~~ys~~~-g~v~fi~Lds~~ 267 (454)
+.. .+|+++++||||..... ...+.+.+. +|. .+..||+|+. ++++||+||+..
T Consensus 83 l~~~~~p~~~v~GNHD~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~y~~~~~~~~~~i~ld~~~ 151 (322)
T 2nxf_A 83 LDACSVDVHHVWGNHEFYNFS------RPSLLSSRLNSAQRTGTDTGSDLIG-----DDIYAYEFSPAPNFRFVLLDAYD 151 (322)
T ss_dssp HHTTCSEEEECCCHHHHHHCC------HHHHHTSTTCCCC------CEECGG-----GTCCCEEEEEETTEEEEECCTTS
T ss_pred HHhcCCcEEEecCCCCcccCC------HHHHhhhhCCcccccccccccccCC-----CCceEEEEecCCCEEEEEEcCce
Confidence 333 47999999999994211 112222222 121 1356899998 899999999854
Q ss_pred C----------------------------------------------CCCCHHHHHHHHHHHHhhccCCCCeEEEEEccc
Q 012895 268 D----------------------------------------------FDEDSAQYKWLKADLAKINRKKTPWIFVLLHAP 301 (454)
Q Consensus 268 ~----------------------------------------------~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P 301 (454)
. .....+|++||+++|++..++ ..++||++|+|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~~wL~~~L~~~~~~-~~~~iv~~H~p 230 (322)
T 2nxf_A 152 LSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHK-QERVLIFSHLP 230 (322)
T ss_dssp BCSSSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHHH-TCEEEEEESSC
T ss_pred ecccccCCCChhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHHHHHHHHHHHHHHhc-CCcEEEEEccC
Confidence 1 012489999999999987542 34589999999
Q ss_pred cccCCCCCCCCcHHHHHHHHHHHHhc-CCcEEEecccccceeeecccCCCcCCCCcEEEEECCCCCCCCcccccCCCCCC
Q 012895 302 WYNTNTAHQGEGESMRNSMEELLYNA-RVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSP 380 (454)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~l~~ll~~~-~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~ 380 (454)
++........ ....++.|.+++.++ +|+++|+||+|.+++... ..|+.|++.|+.- . . +
T Consensus 231 ~~~~~~~~~~-~~~~~~~~~~ll~~~~~v~~~~~GH~H~~~~~~~-------~~g~~~i~~~~~~-----~--~--~--- 290 (322)
T 2nxf_A 231 VHPCAADPIC-LAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTD-------SSGAQHITLEGVI-----E--T--P--- 290 (322)
T ss_dssp CCTTSSCGGG-SCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEEC-------TTSCEEEECCCGG-----G--C--C---
T ss_pred CCCCCCCccc-cccCHHHHHHHHhcCCCeEEEEcCCcCCCCceec-------cCCceEEEecchh-----h--C--C---
Confidence 9875432100 011357889999999 799999999999887651 2477787765431 1 1 1
Q ss_pred CceeeecccCEEEEEEecCCeEEEEEE
Q 012895 381 LSMFQESSFGHARLKILDETRAHWSWY 407 (454)
Q Consensus 381 ~~~~~~~~~G~~~l~v~~~~~~~~~~~ 407 (454)
....||..+++.+ ..+.+..+
T Consensus 291 -----~~~~~y~~v~~~~-~~~~~~~~ 311 (322)
T 2nxf_A 291 -----PHSHAFATAYLYE-DRMVMKGR 311 (322)
T ss_dssp -----TTSCEEEEEEECS-SEEEEEEE
T ss_pred -----CCCCcEEEEEEEC-CeEEEEec
Confidence 1134788888754 45666544
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.3e-19 Score=183.08 Aligned_cols=197 Identities=17% Similarity=0.217 Sum_probs=129.3
Q ss_pred CCCeEEEEEecCCCCCC-----------------------hH----HHHHHhhcCCCCeEeecCccccCCCChhhHHHHh
Q 012895 145 NFPIEFAIVGDLGQTEW-----------------------TN----STLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFG 197 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~-----------------------~~----~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~ 197 (454)
..++||++++|+|.... .. .+++.+++.+||+||++||+++.+.. ..++.+.
T Consensus 37 ~~~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~-~~~~~~~ 115 (443)
T 2xmo_A 37 DRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLTNNGEK-TSHEELA 115 (443)
T ss_dssp CCCEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCSEEEEESCCBSSCCH-HHHHHHH
T ss_pred CCCeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCH-HHHHHHH
Confidence 57899999999997532 12 23444556789999999999986543 3566666
Q ss_pred hhhhhhhc-CCCeeecCCCcccCCCCCCC----------cchhhhhhhhccCC-CCCC---CCCCCceEEEEeCeEEEEE
Q 012895 198 RLVEPYAS-SRPWMVTEGNHEIESIPIIL----------PHAFKAYNARWLMP-YEES---GSSSNLYYSFDIAGAHIIM 262 (454)
Q Consensus 198 ~~~~~l~~-~~P~~~v~GNHD~~~~~~~~----------~~~~~~~~~~~~~p-~~~~---~~~~~~~ys~~~g~v~fi~ 262 (454)
+.++.+.. .+|+++++||||+....... ......|.+.|... .... ......|+.+..++++|++
T Consensus 116 ~~l~~l~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~i~ 195 (443)
T 2xmo_A 116 KKLTQVEKNGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSKVWLLM 195 (443)
T ss_dssp HHHHHHHHTTCEEEEECCTTTSSCTTCEEEETTEEEECCCCCHHHHHHHTCCCCCTTCSEECSSSSCEEECSBSSEEEEE
T ss_pred HHHHHHHhCCCeEEEECCcCCCCCccccccCCcccccccccCHHHHHHHhhhcChhhhhccCCCCceEEEecCCCEEEEE
Confidence 66666643 58999999999995421100 00122333333211 0000 0011234445578899999
Q ss_pred ecccCC------------CCCCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCC-CcHHHHHHHHHHHHhcCC
Q 012895 263 LGSYTD------------FDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQG-EGESMRNSMEELLYNARV 329 (454)
Q Consensus 263 Lds~~~------------~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~-~~~~~~~~l~~ll~~~~v 329 (454)
||+... .....+|++||++.|++.... ...+|+++|+|++........ .....++.+.+++.+++|
T Consensus 196 Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~~-~~~~Iv~~H~p~~~~~~~~~~~~~~~~~~~l~~ll~~~~v 274 (443)
T 2xmo_A 196 LDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKKN-GAKLIPVLHHNLTDHNDVIQKGYTINYNQQVIDALTEGAM 274 (443)
T ss_dssp CCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHHT-TCEEEEECSSBSSCSSCC--CCSBCTTHHHHHHHHHHTTC
T ss_pred eeCCCcCcccccCCCCcCCccCHHHHHHHHHHHHHHHHc-CCeEEEEECCCCcccccccccccccccHHHHHHHHHHcCC
Confidence 998642 124689999999999987542 345899999999865432211 111246789999999999
Q ss_pred cEEEecccccceee
Q 012895 330 DVVFAGHVHAYERF 343 (454)
Q Consensus 330 ~lvl~GH~H~y~r~ 343 (454)
+++|+||+|.....
T Consensus 275 ~lvl~GH~H~~~~~ 288 (443)
T 2xmo_A 275 DFSLSGHIHTQNIR 288 (443)
T ss_dssp CEEEECSSCSCEEE
T ss_pred eEEEECCcccCchh
Confidence 99999999996654
|
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.63 E-value=5.1e-16 Score=143.13 Aligned_cols=171 Identities=10% Similarity=0.006 Sum_probs=99.8
Q ss_pred CCeEEEEEecCCCCCCh-HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCCC
Q 012895 146 FPIEFAIVGDLGQTEWT-NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPII 224 (454)
Q Consensus 146 ~~~~f~~igD~~~~~~~-~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~ 224 (454)
..+||+++||+|..... .++++.+.+.++|+||++||+++.......+..+.+.++.+ ..|+++++||||....
T Consensus 4 ~~mri~~iSD~H~~~~~~~~~~~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~l~~~--~~pv~~v~GNHD~~~~--- 78 (228)
T 1uf3_A 4 TVRYILATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEA--HLPTAYVPGPQDAPIW--- 78 (228)
T ss_dssp CCCEEEEEECCTTCHHHHHHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHHHHHHGGG--CSCEEEECCTTSCSHH---
T ss_pred ceEEEEEEeeccCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhc--CCcEEEECCCCCchhH---
Confidence 35899999999986422 23444455568999999999997653433333444433332 4799999999998421
Q ss_pred Ccchhhhhhhhc----cCCCCCCCCCCCceEEEEeC-eEEEEEecccC--CCCCCHHHH--------HHHHHHHHhhccC
Q 012895 225 LPHAFKAYNARW----LMPYEESGSSSNLYYSFDIA-GAHIIMLGSYT--DFDEDSAQY--------KWLKADLAKINRK 289 (454)
Q Consensus 225 ~~~~~~~~~~~~----~~p~~~~~~~~~~~ys~~~g-~v~fi~Lds~~--~~~~~~~Q~--------~WL~~~L~~~~~~ 289 (454)
..+...+ ..|.... .... .+.++ +++|++++... .+....+|+ .|+++.|++..
T Consensus 79 -----~~~~~~~~~~~~~~~~~~--l~~~--~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-- 147 (228)
T 1uf3_A 79 -----EYLREAANVELVHPEMRN--VHET--FTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWELK-- 147 (228)
T ss_dssp -----HHHHHHHHHHHHCTTEEE--CBTS--EEEETTTEEEEEECSEEESSSCCBSSSSCEEEHHHHHHHHGGGGGSC--
T ss_pred -----HHHHhhhhhhccCcceEE--cccc--eEeeCCCcEEecCCCCcCCCCccChhhcccchhhhHHHHHHHHHhCC--
Confidence 1111111 0111000 0011 24455 78999887421 111122222 33344444432
Q ss_pred CCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccc
Q 012895 290 KTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVH 338 (454)
Q Consensus 290 ~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H 338 (454)
..+.|+++|+|++....... ....+.+++.+++++++++||+|
T Consensus 148 -~~~~il~~H~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~GH~H 190 (228)
T 1uf3_A 148 -DYPKIFLFHTMPYHKGLNEQ-----GSHEVAHLIKTHNPLLVLVAGKG 190 (228)
T ss_dssp -SCCEEEEESSCBCBTTTBTT-----SBHHHHHHHHHHCCSEEEECCSS
T ss_pred -CCCeEEEEccCcccCCcccc-----CHHHHHHHHHHhCCCEEEEcccc
Confidence 23589999999876421111 12466778888899999999999
|
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.61 E-value=2.5e-15 Score=141.68 Aligned_cols=181 Identities=9% Similarity=0.087 Sum_probs=102.3
Q ss_pred CeEEEEEecCCCCCCh-HHHHHHhhcCCCCeEeecCccccCCCChhh-----------------------HHHHhhhhhh
Q 012895 147 PIEFAIVGDLGQTEWT-NSTLDHVGSKDYDVFLLPGDLSYADFQQPL-----------------------WDSFGRLVEP 202 (454)
Q Consensus 147 ~~~f~~igD~~~~~~~-~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~-----------------------~~~~~~~~~~ 202 (454)
++||+++||+|..... .++++.+...++|+||++||+++....... .+.+.++++.
T Consensus 5 ~mri~~iSDlH~~~~~~~~~l~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~ 84 (260)
T 2yvt_A 5 PRKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDKFFRE 84 (260)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHHHCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEeecCCChHHHHHHHHHHHhcCCCEEEECCCCCCccCcchhhhhhhhhhcccchhhhhHHHHHHHHHHHHHHHH
Confidence 5899999999986533 456666666799999999999975422100 0224445555
Q ss_pred hhc-CCCeeecCCCcccCCCCCCCcchhhhhhhhcc-CCCCCCCCCCCceEEEEeCeEEEEEecccCCC-CCCHHHHH--
Q 012895 203 YAS-SRPWMVTEGNHEIESIPIILPHAFKAYNARWL-MPYEESGSSSNLYYSFDIAGAHIIMLGSYTDF-DEDSAQYK-- 277 (454)
Q Consensus 203 l~~-~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~-~~~~~Q~~-- 277 (454)
+.. ..|+++++||||..... .+........ .|.. ..-.....+.+++++|++++..... ....+++.
T Consensus 85 l~~~~~pv~~v~GNHD~~~~~-----~~~~~~~~~~~~~~~---~~l~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 156 (260)
T 2yvt_A 85 IGELGVKTFVVPGKNDAPLKI-----FLRAAYEAETAYPNI---RVLHEGFAGWRGEFEVIGFGGLLTEHEFEEDFVLKY 156 (260)
T ss_dssp HHTTCSEEEEECCTTSCCHHH-----HHHHHHHTTTTCTTE---EECSSEEEEETTTEEEEEECSEEESSCCBSSSSCEE
T ss_pred HHhcCCcEEEEcCCCCchhhh-----hHHHHhhhccCCcce---EEecCcceEEECCEEEEecCCCcCCCCcCHHHHhhc
Confidence 544 48999999999984110 0001111110 0000 0001112367888999999753211 11122222
Q ss_pred --HHH----HHHHhhccCCCCeEEEEEccccccCCCCCC--CCcHHHHHHHHHHHHhcCCcEEEecccc
Q 012895 278 --WLK----ADLAKINRKKTPWIFVLLHAPWYNTNTAHQ--GEGESMRNSMEELLYNARVDVVFAGHVH 338 (454)
Q Consensus 278 --WL~----~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~--~~~~~~~~~l~~ll~~~~v~lvl~GH~H 338 (454)
|+. +.|.+.. . ...|+++|+|++....... .......+.+.+++.+++++++++||+|
T Consensus 157 ~~~~~~~~l~~l~~~~--~-~~~Il~~H~pp~~~~~d~~~~~~~~~~~~~l~~~~~~~~~~~vl~GH~H 222 (260)
T 2yvt_A 157 PRWYVEYILKFVNELK--P-RRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVG 222 (260)
T ss_dssp EHHHHHHHGGGGGGSC--C-CEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSC
T ss_pred chhhHHHHHHHHHhcC--C-CCEEEEECCCccccccccCcccccccCcHHHHHHHHHhCCCEEEECCcc
Confidence 443 2333221 2 2469999999875311110 0001122567778888999999999999
|
| >2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A | Back alignment and structure |
|---|
Probab=99.61 E-value=3.6e-15 Score=146.40 Aligned_cols=244 Identities=13% Similarity=0.103 Sum_probs=127.9
Q ss_pred CCCeEEEEEecCCCC----CC-------------hHHHHHHhhcCCCCeEeecCc-cccCCCCh-hhHHHHhhhhhhhhc
Q 012895 145 NFPIEFAIVGDLGQT----EW-------------TNSTLDHVGSKDYDVFLLPGD-LSYADFQQ-PLWDSFGRLVEPYAS 205 (454)
Q Consensus 145 ~~~~~f~~igD~~~~----~~-------------~~~~l~~i~~~~pd~vl~~GD-l~y~~~~~-~~~~~~~~~~~~l~~ 205 (454)
...+||++++|+|.+ .. ..++++.+.+.+||+||++|| +++..... .....+.+.++.+..
T Consensus 16 ~~~mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~~~~D~vliaGD~l~d~~~~~~~~~~~~~~~l~~L~~ 95 (336)
T 2q8u_A 16 LKELKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMR 95 (336)
T ss_dssp CCEEEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHHTCSEEEEESCSBSCSSCCCHHHHHHHHHHHHHHHH
T ss_pred cCceEEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHHhCCCEEEECCccccCCCCCCHHHHHHHHHHHHHHHh
Confidence 467999999999976 21 123444555789999999999 77644432 223455666666654
Q ss_pred CCCeeecCCCcccCCCCCCCcchhhhhhhhcc----CCCCCCCCCCCceEEEEeCeEEEEEecccCCC-------CCCHH
Q 012895 206 SRPWMVTEGNHEIESIPIILPHAFKAYNARWL----MPYEESGSSSNLYYSFDIAGAHIIMLGSYTDF-------DEDSA 274 (454)
Q Consensus 206 ~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~----~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~-------~~~~~ 274 (454)
.+|+++++||||... . ..+..+..... +..+. .....+.++.+++.|++++..... ....+
T Consensus 96 ~~pv~~i~GNHD~~~-~----~~~~~~l~~~g~nv~v~~~~---~~~~~~~~~~~~v~i~glp~~~~~~~~~~~~~~~~~ 167 (336)
T 2q8u_A 96 TAPVVVLPGNHDWKG-L----KLFGNFVTSISSDITFVMSF---EPVDVEAKRGQKVRILPFPYPDESEALRKNEGDFRF 167 (336)
T ss_dssp HSCEEECCC-------C----HHHHHHHHHHCSSEEECCSS---SCEEEECTTSCEEEEEEECCC-------CCSSHHHH
T ss_pred cCCEEEECCCCCccc-c----ccHHHHHHhcCCEEEEEecc---cccCceEEeCCCEEEEECCCCCHHHHHHHhhHHHHH
Confidence 489999999999853 1 12222222111 11100 000001122356888888643211 11246
Q ss_pred HHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCCcCCC
Q 012895 275 QYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPC 354 (454)
Q Consensus 275 Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~ 354 (454)
|++|+.+.|...-.....+.|+++|.|+....... .+.......+...+.+.++|++++||+|..+....
T Consensus 168 ~~~~~~~~l~~~~~~~~~~~Ill~H~~~~~~~~~~-~~~~~~~~~v~~~l~~~~~d~v~~GH~H~~~~~~~--------- 237 (336)
T 2q8u_A 168 FLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGYA-GIEQGREIIINRALIPSVVDYAALGHIHSFREIQK--------- 237 (336)
T ss_dssp HHHHHHHHHHHHHHTCSSEEEEEEESEETTCC---------CCCEECGGGSCTTSSEEEEESCSSCEEEEE---------
T ss_pred HHHHHHHHHHHhccCCCCCEEEEECccccCCCCCC-CccchhhcccCHHHccccCCEEEEccccCceEeCC---------
Confidence 78899888865310133579999999986432110 00000000111123346899999999999776531
Q ss_pred CcEEEEECCCCCCCCcccccCCCCCCCceeeecccCEEEEEEecCCeEEEEEEEecCCCceeeeEEEE
Q 012895 355 GPIYITIGDGGNREGLALEFKEPKSPLSMFQESSFGHARLKILDETRAHWSWYRNNDSDAVIADEVRL 422 (454)
Q Consensus 355 g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i 422 (454)
++..+.+|+.. +. .+... ...-||..+++.+.....++++.... . .+-.+.+
T Consensus 238 ~~~i~y~GS~~---~~--s~~e~--------~~~~~~~lv~i~~~~~~~v~~i~~~~-r--~~~~~~~ 289 (336)
T 2q8u_A 238 QPLTIYPGSLI---RI--DFGEE--------ADEKGAVFVELKRGEPPRYERIDASP-L--PLKTLYY 289 (336)
T ss_dssp TTEEEECCCSS---CC--SGGGT--------TCCCEEEEEEEETTSCCEEEEEECCC-C--CEEEEEE
T ss_pred CccEEECCCCc---CC--Ccccc--------CCCCEEEEEEEeCCCccEEEEEECCC-E--EEEEeec
Confidence 12223344321 11 12110 01347888998765567888888654 3 3444444
|
| >1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A | Back alignment and structure |
|---|
Probab=99.46 E-value=7.5e-12 Score=112.52 Aligned_cols=179 Identities=16% Similarity=0.168 Sum_probs=109.8
Q ss_pred CCeEEEEEecCCCCCC---hHHHHHH-hhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCC
Q 012895 146 FPIEFAIVGDLGQTEW---TNSTLDH-VGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESI 221 (454)
Q Consensus 146 ~~~~f~~igD~~~~~~---~~~~l~~-i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~ 221 (454)
..+||+++||+|.... ..+.+.. +...++|+|+++||++. . ...+.++.+. .|+++++||||...
T Consensus 9 ~mm~i~~iSD~H~~~~~~~~~~~l~~~~~~~~~d~ii~~GDl~~----~----~~~~~l~~~~--~~~~~v~GNhD~~~- 77 (192)
T 1z2w_A 9 DRMLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCT----K----ESYDYLKTLA--GDVHIVRGDFDENL- 77 (192)
T ss_dssp --CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCSEEEECSCCBS----H----HHHHHHHHHC--SEEEECCCTTCCCT-
T ss_pred cceEEEEEecCCCCccchhHHHHHHHHhccCCCCEEEEcCCCCC----H----HHHHHHHhcC--CCEEEEcCCcCccc-
Confidence 3489999999997532 2233443 34568999999999984 1 1223333332 58999999999831
Q ss_pred CCCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEEEEEccc
Q 012895 222 PIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLHAP 301 (454)
Q Consensus 222 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P 301 (454)
.+|. ...++. ..++|+++|.+
T Consensus 78 ---------------~lp~---------~~~~~~-----------------------------------~~~~i~l~Hg~ 98 (192)
T 1z2w_A 78 ---------------NYPE---------QKVVTV-----------------------------------GQFKIGLIHGH 98 (192)
T ss_dssp ---------------TSCS---------EEEEEE-----------------------------------TTEEEEEECSC
T ss_pred ---------------cCCc---------ceEEEE-----------------------------------CCEEEEEECCC
Confidence 1221 111111 12478899965
Q ss_pred cccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCCcCCCCcEEEEECCCCCCCCcccccCCCCCCC
Q 012895 302 WYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSPL 381 (454)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~ 381 (454)
++.... ..+.+..++.+.+++++++||+|...... .+++.++..|+.+.+.. . .+
T Consensus 99 ~~~~~~--------~~~~l~~~~~~~~~d~vi~GHtH~~~~~~--------~~~~~~inpGS~~~~~~---~-~~----- 153 (192)
T 1z2w_A 99 QVIPWG--------DMASLALLQRQFDVDILISGHTHKFEAFE--------HENKFYINPGSATGAYN---A-LE----- 153 (192)
T ss_dssp CCCBTT--------CHHHHHHHHHHHSSSEEECCSSCCCEEEE--------ETTEEEEECCCTTCCCC---S-SC-----
T ss_pred cCCCCC--------CHHHHHHHHHhcCCCEEEECCcCcCccEe--------ECCEEEEECCcccccCC---C-CC-----
Confidence 543211 12456677777899999999999854332 14677887777653211 0 00
Q ss_pred ceeeecccCEEEEEEecCCeEEEEEEEecCCCceeeeEEEEEE
Q 012895 382 SMFQESSFGHARLKILDETRAHWSWYRNNDSDAVIADEVRLES 424 (454)
Q Consensus 382 ~~~~~~~~G~~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i~~ 424 (454)
.....+|..|++.+ ..+.++++..+.++ ....++.+.|
T Consensus 154 ---~~~~~~y~il~~~~-~~~~~~~~~~~~~~-~~v~~~~~~~ 191 (192)
T 1z2w_A 154 ---TNIIPSFVLMDIQA-STVVTYVYQLIGDD-VKVERIEYKK 191 (192)
T ss_dssp ---SCCCCEEEEEEEET-TEEEEEEEEEETTE-EEEEEEEEEC
T ss_pred ---cCCCCcEEEEEEEC-CEEEEEEEEccCCE-EEEEEEEEcc
Confidence 01234788999854 57888988876654 4566666654
|
| >3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=6.5e-13 Score=126.38 Aligned_cols=204 Identities=12% Similarity=0.020 Sum_probs=111.0
Q ss_pred CCCeEEEEEecCCCCCChHHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCCC
Q 012895 145 NFPIEFAIVGDLGQTEWTNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPII 224 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~~~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~ 224 (454)
...+||+++||+|...... .-.++|+||++||+++.+. ..+++.+.+.++.+. ..|+++++||||+..+..+
T Consensus 57 ~~~mri~~iSD~H~~~~~l------~i~~~D~vi~aGDl~~~g~-~~e~~~~~~~L~~l~-~~~v~~V~GNHD~~~d~~~ 128 (296)
T 3rl5_A 57 AGHTRFVCISDTRSRTDGI------QMPYGDILLHTGDFTELGL-PSEVKKFNDWLGNLP-YEYKIVIAGNHELTFDKEF 128 (296)
T ss_dssp TTEEEEEEEBCCTTCCTTC------CCCSCSEEEECSCCSSSCC-HHHHHHHHHHHHTSC-CSEEEECCCTTCGGGCHHH
T ss_pred CCCeEEEEEeeCCCCcchh------ccCCCCEEEECCcccCCCC-HHHHHHHHHHHHhCC-CCeEEEEcCCcccccchhh
Confidence 5679999999999865321 3368999999999998654 334455555555542 2468999999999643221
Q ss_pred Cc----chhhhhhhhccCCC----CCCCCCCCce----EEEEeCeEEEEEecccCCCC---CCHHHHHHHHHHHHhhccC
Q 012895 225 LP----HAFKAYNARWLMPY----EESGSSSNLY----YSFDIAGAHIIMLGSYTDFD---EDSAQYKWLKADLAKINRK 289 (454)
Q Consensus 225 ~~----~~~~~~~~~~~~p~----~~~~~~~~~~----ys~~~g~v~fi~Lds~~~~~---~~~~Q~~WL~~~L~~~~~~ 289 (454)
-. ..+..+...-..+. +......+.. -...+++++|++..-...+. ...++.+++.+.......
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~~~~i~Gl~i~Gsp~tP~~~~~~f~~~~~~~~~~~~~~ip~- 207 (296)
T 3rl5_A 129 MADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQDSEVTVKGFRIYGAPWTPWFNGWGFNLPRGQSLLDKWNLIPE- 207 (296)
T ss_dssp HHHHTTSCGGGSHHHHTCCHHHHTTTGGGCTTSEECSSEEEEETTEEEEEECCBCC--CCTTBCCTTHHHHHHHTTSCT-
T ss_pred hhhhhcccccccccccccccchhhhHhhhcCCeEEecCCcEEECCEEEEEecCCCCCCCcCCCcchHHHHHHHHhhCCC-
Confidence 00 00000000000000 0000000111 23567889998865322111 111222244333333322
Q ss_pred CCCeEEEEEccccccCCCCCC-CCcHHHHHHHHHHH-HhcCCcEEEecccccceeeecccCCCcCCCCcEEEEECCCCC
Q 012895 290 KTPWIFVLLHAPWYNTNTAHQ-GEGESMRNSMEELL-YNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGGN 366 (454)
Q Consensus 290 ~~~w~Iv~~H~P~~~~~~~~~-~~~~~~~~~l~~ll-~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~ 366 (454)
+ ..|+++|.|++....... .......+.|.+.+ ++++++++++||+|....... .+++++|..|+-|.
T Consensus 208 ~--~dILvTH~PP~g~~D~~~~~~~~~G~~~L~~~i~~~~~p~l~v~GH~H~~~~~~~-------~g~t~vvNpGs~~~ 277 (296)
T 3rl5_A 208 G--TDILMTHGPPLGFRDWVPKELQRVGCVELLNTVQRRVRPKLHVFGGIHEGYGTMT-------DGYTTYINASTCTV 277 (296)
T ss_dssp T--CSEEEESSCBTTSSCEEGGGTEECSBHHHHHHHHHTTCCSEEEECSCGGGCEEEE-------CSSCEEEECBCSCT
T ss_pred C--CeEEEECCCccccccccccccCcCChHHHHHHHHHhcCCCEEEECCccCCCceEE-------ECCEEEEECCcCCc
Confidence 2 359999999987643110 00011224566666 689999999999998433221 24678887777654
|
| >2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.44 E-value=2.5e-12 Score=117.82 Aligned_cols=186 Identities=13% Similarity=0.193 Sum_probs=109.3
Q ss_pred CeEEEEEecCCCCCC---hHHHHHH-hhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCC
Q 012895 147 PIEFAIVGDLGQTEW---TNSTLDH-VGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIP 222 (454)
Q Consensus 147 ~~~f~~igD~~~~~~---~~~~l~~-i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~ 222 (454)
.+|++++||+|.... ..+.+.. +...++|+|+++||+++ ....+.++.+. .|+++++||||.....
T Consensus 25 ~m~i~~iSD~H~~~~~~~l~~~l~~~~~~~~~D~vi~~GDl~~--------~~~l~~l~~~~--~~v~~V~GNHD~~~~~ 94 (215)
T 2a22_A 25 GDLVLLIGDLKIPYGAKELPSNFRELLATDKINYVLCTGNVCS--------QEYVEMLKNIT--KNVYIVSGDLDSAIFN 94 (215)
T ss_dssp CEEEEEECCCCTTTTCSSCCGGGHHHHHCTTCCEEEECSCCCC--------HHHHHHHHHHC--SCEEECCCTTCCSCCB
T ss_pred CcEEEEEecCCCCCChHHHHHHHHHHHhcCCCCEEEECCCCCC--------HHHHHHHHHcC--CCEEEecCCCcCcccc
Confidence 689999999997542 2233333 35678999999999984 12233344332 6899999999984211
Q ss_pred CCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEEEEEcccc
Q 012895 223 IILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPW 302 (454)
Q Consensus 223 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~ 302 (454)
. . ..+.. .+| ....+ + ...++|+++|.++
T Consensus 95 ~--~---~~~~~--~lp---------~~~~~---------------------------------~--~~~~~i~l~Hg~~ 123 (215)
T 2a22_A 95 P--D---PESNG--VFP---------EYVVV---------------------------------Q--IGEFKIGLMHGNQ 123 (215)
T ss_dssp C--C---GGGTB--CCC---------SEEEE---------------------------------E--ETTEEEEEECSTT
T ss_pred c--C---hhhHh--hCC---------ceEEE---------------------------------e--cCCeEEEEEcCCc
Confidence 0 0 00000 001 00000 0 0124789999655
Q ss_pred ccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCCcCCCCcEEEEECCCCCCCCcccccCCCCCCCc
Q 012895 303 YNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSPLS 382 (454)
Q Consensus 303 ~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~ 382 (454)
+.... ..+.+..++.+.+++++++||+|...... .+++.++..|+.+.... ..+.
T Consensus 124 ~~~~~--------~~~~l~~~~~~~~~d~vl~GHtH~~~~~~--------~~~~~~inpGS~~~~~~----~~~~----- 178 (215)
T 2a22_A 124 VLPWD--------DPGSLEQWQRRLDCDILVTGHTHKLRVFE--------KNGKLFLNPGTATGAFS----ALTP----- 178 (215)
T ss_dssp SSSTT--------CHHHHHHHHHHHTCSEEEECSSCCCEEEE--------ETTEEEEECCCSSCCCC----TTST-----
T ss_pred cCCCC--------CHHHHHHHHhhcCCCEEEECCcCCCccEe--------eCCEEEEECCcccccCC----CCCC-----
Confidence 43211 12456677777899999999999854332 14677777777653210 0000
Q ss_pred eeeecccCEEEEEEecCCeEEEEEEEecCCCceeeeEEEEE
Q 012895 383 MFQESSFGHARLKILDETRAHWSWYRNNDSDAVIADEVRLE 423 (454)
Q Consensus 383 ~~~~~~~G~~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i~ 423 (454)
....+|..|++.+ ..+.++++..++++ ..+.+..+.
T Consensus 179 ---~~~~~y~il~i~~-~~i~~~~~~~~~~~-~~v~~~~~~ 214 (215)
T 2a22_A 179 ---DAPPSFMLMALQG-NKVVLYVYDLRDGK-TNVAMSEFS 214 (215)
T ss_dssp ---TCCCEEEEEEEET-TEEEEEEEEEETTE-EEEEEEEEE
T ss_pred ---CCCCcEEEEEEeC-CcEEEEEEEecCCe-EEEEEEEee
Confidence 1234788999854 57888888876665 345555444
|
| >3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=3.8e-12 Score=127.12 Aligned_cols=179 Identities=12% Similarity=-0.046 Sum_probs=98.8
Q ss_pred CCCeEEEEEecCCCCCC--------------hHHHHHHhhcCCCCeEeecCccccCCCC-hhhHHHHhhhhhhhhc-CCC
Q 012895 145 NFPIEFAIVGDLGQTEW--------------TNSTLDHVGSKDYDVFLLPGDLSYADFQ-QPLWDSFGRLVEPYAS-SRP 208 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~--------------~~~~l~~i~~~~pd~vl~~GDl~y~~~~-~~~~~~~~~~~~~l~~-~~P 208 (454)
..++||++++|+|.+.. ...+++.+...+||+||++||+++.... ...+..+.+.++.+.. .+|
T Consensus 18 ~~~mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~~~~D~VliaGDl~d~~~p~~~~~~~~~~~l~~L~~~~~p 97 (386)
T 3av0_A 18 GSHMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFNDLRPPVKALRIAMQAFKKLHENNIK 97 (386)
T ss_dssp CCCCEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHTTCCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHHTTCE
T ss_pred CCCeEEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHhcCCc
Confidence 67899999999998742 1234455567899999999999876543 2344556667777754 389
Q ss_pred eeecCCCcccCCCCCCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhcc
Q 012895 209 WMVTEGNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINR 288 (454)
Q Consensus 209 ~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~ 288 (454)
+++++||||....... ......+...+..-. ...++..+-+++.+++++...... .....+||...-....
T Consensus 98 v~~v~GNHD~~~~~~~-~~~~~~l~~~v~~l~------~~~v~~~~~~~v~i~gl~~~~~~~-~~~~~~~l~~l~~~~~- 168 (386)
T 3av0_A 98 VYIVAGNHEMPRRLGE-ESPLALLKDYVKILD------GKDVINVNGEEIFICGTYYHKKSK-REEMLDKLKNFESEAK- 168 (386)
T ss_dssp EEECCCGGGSCSSTTS-CCGGGGGTTTCEECS------EEEEEEETTEEEEEEEECCCCSTT-HHHHHHHHHHHHHHHH-
T ss_pred EEEEcCCCCCCccccc-cCHHHHHHHHeEEcC------CCcEEEeCCCCEEEEeCCCCCHHH-HHHHHHHHHHhhhhcc-
Confidence 9999999998532110 001111111110000 011221112458899998643321 1222334332111111
Q ss_pred CCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeccccccee
Q 012895 289 KKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYER 342 (454)
Q Consensus 289 ~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r 342 (454)
...+.|+++|+|+........... . .. +. ++|++++||+|..+.
T Consensus 169 -~~~~~Ill~H~~~~~~~~~~~~~~--~-~~----l~--~~d~v~~GH~H~~~~ 212 (386)
T 3av0_A 169 -NYKKKILMLHQGINPYIPLDYELE--H-FD----LP--KFSYYALGHIHKRIL 212 (386)
T ss_dssp -TCSSEEEEECCCCTTTSSSSCSSC--G-GG----SC--CCSEEEECSCCSCEE
T ss_pred -cCCCEEEEECcCccccCCCCcccC--H-HH----hh--hCCeEEccCCCCCcc
Confidence 123589999999754211100000 0 11 11 399999999998743
|
| >3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=2.1e-12 Score=122.53 Aligned_cols=221 Identities=13% Similarity=0.067 Sum_probs=120.5
Q ss_pred CCCeEEEEEecCCCCCC-hHHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCC
Q 012895 145 NFPIEFAIVGDLGQTEW-TNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPI 223 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~-~~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~ 223 (454)
..+.|++++||+|.... ..++++.+...++|.|+++||+++.+... ....+.++ ...|++++.||||...
T Consensus 9 ~~~~~i~~iSDiHg~~~~l~~vl~~~~~~~~D~ii~~GDlv~~g~~~---~~~~~~l~---~~~~~~~v~GNhD~~~--- 79 (270)
T 3qfm_A 9 MDMTKIALLSDIHGNTTALEAVLADARQLGVDEYWLLGDILMPGTGR---RRILDLLD---QLPITARVLGNWEDSL--- 79 (270)
T ss_dssp --CEEEEEECCCTTCHHHHHHHHHHHHHTTCCEEEECSCCSSSSSCS---HHHHHHHH---TSCEEEECCCHHHHHH---
T ss_pred ccccEEEEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCH---HHHHHHHH---ccCCEEEEcCChHHHH---
Confidence 46799999999996532 23566677777999999999999755432 22233333 3247899999999831
Q ss_pred CCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEEEEEccccc
Q 012895 224 ILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWY 303 (454)
Q Consensus 224 ~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~ 303 (454)
.......+.++.. ...+.. . ...+.......++++||+.........-....|+++|..+.
T Consensus 80 -----~~~~~~~~~~~~~-----~~~~~~----~-----~~~~~~~~L~~~~~~~L~~LP~~~~~~~~g~~i~lvHg~p~ 140 (270)
T 3qfm_A 80 -----WHGVRKELDSTRP-----SQRYLL----R-----QCQYVLEEISLEEIEVLHNQPLQIHRQFGDLTVGISHHLPD 140 (270)
T ss_dssp -----HHHHTTCSCTTSH-----HHHHHH----H-----HHHHHHTTSCHHHHHHHHSCCSEEEEEETTEEEEEESSBTT
T ss_pred -----HHhhccccCCCcH-----HHHHHH----H-----HHHHHHHHcCHHHHHHHHhCCCceEEEECCcEEEEEECCCC
Confidence 0000000000000 000000 0 00011123457899999864332211111246888897654
Q ss_pred cCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCCcCCCCcEEEEECCCCCCCCcccccCCCCCCCce
Q 012895 304 NTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSPLSM 383 (454)
Q Consensus 304 ~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~ 383 (454)
.... .........+.+..++.+.+++++|+||+|....... .++..+|..|+-|.+.. ..+.++
T Consensus 141 ~~~~-~~~~~~~~~~~l~~~~~~~~~d~~i~GHtH~~~~~~~-------~~~~~~iNpGSvg~pr~-----~~~~~~--- 204 (270)
T 3qfm_A 141 KNWG-RELIHTGKQEEFDRLVTHPPCDIAVYGHIHQQLLRYG-------TGGQLIVNPGSIGQPFF-----LDAQLR--- 204 (270)
T ss_dssp BSSS-STTSTTCCHHHHHHTTTTTTCSEEECCSSCSEEEEEC-------TTSCEEEEECCSSSCCC-----SSTTGG---
T ss_pred CCCC-ceecCCCcHHHHHHHhcccCCCEEEECCcCchHheec-------cCCEEEEECCCccCCCC-----CCcccc---
Confidence 3211 1111111235677777788999999999997433221 24788899999886532 111000
Q ss_pred eeecccCEEEEEEecCCeEEEEEEEec
Q 012895 384 FQESSFGHARLKILDETRAHWSWYRNN 410 (454)
Q Consensus 384 ~~~~~~G~~~l~v~~~~~~~~~~~~~~ 410 (454)
......|..|++.+.....++|++..
T Consensus 205 -~~~~asyaild~~~~~~~~v~~~rv~ 230 (270)
T 3qfm_A 205 -KDLRAQYMILEFDDKGLVDMDFRRVD 230 (270)
T ss_dssp -GCCCEEEEEEEEETTEEEEEEEEEEC
T ss_pred -CCCCCEEEEEEecCCCceEEEEEEeC
Confidence 01123678888765433577777653
|
| >3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C | Back alignment and structure |
|---|
Probab=99.40 E-value=3.1e-12 Score=127.39 Aligned_cols=188 Identities=14% Similarity=0.169 Sum_probs=102.9
Q ss_pred eEEEEEecCCCCCC----h-------------HHHHHHhhcCCCCeEeecCccc-cCCCC-hhhHHHHhhhhhhhhcCCC
Q 012895 148 IEFAIVGDLGQTEW----T-------------NSTLDHVGSKDYDVFLLPGDLS-YADFQ-QPLWDSFGRLVEPYASSRP 208 (454)
Q Consensus 148 ~~f~~igD~~~~~~----~-------------~~~l~~i~~~~pd~vl~~GDl~-y~~~~-~~~~~~~~~~~~~l~~~~P 208 (454)
+||++++|+|.+.. . ..+++.+...+||+||++||++ +.... ...+..+.+.+..+...+|
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D~vliaGDl~hd~~~~~~~~~~~~~~~l~~l~~~~~ 80 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMRTAP 80 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCSEEEECSCCBSCSSSCCHHHHHHHHHHHHHHHHHSC
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCCEEEECCCccccCCCCCHHHHHHHHHHHHHHHhCCC
Confidence 68999999998654 1 2233444578999999999999 54332 2344556666666654489
Q ss_pred eeecCCCcccCCCCCCCcchhhhhhhhccCCCCCCCCCCCceEEEE--eC-eEEEEEecccCCCC----CCHHHHHHHHH
Q 012895 209 WMVTEGNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFD--IA-GAHIIMLGSYTDFD----EDSAQYKWLKA 281 (454)
Q Consensus 209 ~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~--~g-~v~fi~Lds~~~~~----~~~~Q~~WL~~ 281 (454)
+++++||||.... .-+..+... ++.+.........+.+. .| .+.|+.+.-..... ....+.+|+.+
T Consensus 81 v~~i~GNHD~~~~-----~~~~~~~~~--~~~~~~~~~~~~~v~l~~~~G~~v~i~glp~~~~~~~~~~~~~~~~~~l~~ 153 (379)
T 3tho_B 81 VVVLPGNQDWKGL-----KLFGNFVTS--ISSDITFVMSFEPVDVEAKRGQKVRILPFPYPDESEALRKNEGDFRFFLES 153 (379)
T ss_dssp EEECCCTTSCTTH-----HHHHHHHHT--TCSSEEECCSSCCEEEECTTCCEEEEEEECCCCCC----CHHHHHHHHHHH
T ss_pred EEEEcCCCccccC-----ccccccccc--cCCcceeecccceEEEEcCCCCEEEEEECCCCCHHHHhhhhccchHHHHHH
Confidence 9999999996310 011111111 11110000001112222 23 47777775322111 13567889998
Q ss_pred HHHhhc---cCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceee
Q 012895 282 DLAKIN---RKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERF 343 (454)
Q Consensus 282 ~L~~~~---~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~ 343 (454)
.|++.. .....+.|+++|.++.........+. .....+...+...++|++++||+|..+..
T Consensus 154 ~l~~~~~~~~~~~~~~I~l~H~~v~g~~~~~~se~-~~~~~v~~~~~~~~~dyvalGH~H~~q~~ 217 (379)
T 3tho_B 154 RLNKLYEEALKKEDFAIFMGHFTVEGLAGYAGIEQ-GREIIINRALIPSVVDYAALGHIHSFREI 217 (379)
T ss_dssp HHHHHHHHHHTCSSEEEEEEESCBSCCCC--------CSCCBCGGGSCTTSSEEEEESCSSCEEE
T ss_pred HHHHHHHHhcCCCCCeEEEEeccccCCccCCCCcc-ccccccCHHHcCcCCCEEEcccccCCeEe
Confidence 887311 11335689999998754322000000 00011211222457999999999998654
|
| >1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A | Back alignment and structure |
|---|
Probab=99.39 E-value=5.6e-13 Score=125.10 Aligned_cols=187 Identities=7% Similarity=-0.017 Sum_probs=102.0
Q ss_pred eEEEEEecCCCCCC-hHHHHHHhh---cC--CCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCC
Q 012895 148 IEFAIVGDLGQTEW-TNSTLDHVG---SK--DYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESI 221 (454)
Q Consensus 148 ~~f~~igD~~~~~~-~~~~l~~i~---~~--~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~ 221 (454)
+|++++||+|.... ..++++.+. .. ++|+||++||+++.+.... ...+.+..+....|+++++||||....
T Consensus 2 m~i~~isD~H~~~~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~~g~~~~---~~~~~l~~l~~~~~~~~v~GNhD~~~~ 78 (252)
T 1nnw_A 2 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGLFPYPK---EVIEVIKDLTKKENVKIIRGKYDQIIA 78 (252)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSSCHH---HHHHHHHHHHHHSCEEEECCHHHHHHH
T ss_pred cEEEEEeecCCCHHHHHHHHHHHHhhhhccCCCCEEEEeCccCCCCCCHH---HHHHHHHhhHhhcCeeEEecchHHHhh
Confidence 68999999997532 234556665 55 8999999999997554322 223344444433689999999997311
Q ss_pred CCCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecc--cCCCCCCHHHHHHHHHHHHhhccCCCCeEEEEEc
Q 012895 222 PIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGS--YTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLH 299 (454)
Q Consensus 222 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds--~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H 299 (454)
.+...+. ... .. ..++..... ... +.......+|++||++........-....|+++|
T Consensus 79 ---------~~~~~~~-~~~------~~-~~~~~~~~~---~~~~~~~~~~l~~~~~~~L~~lp~~~~~~~~~~~i~~~H 138 (252)
T 1nnw_A 79 ---------MSDPHAT-DPG------YI-DKLELPGHV---KKALKFTWEKLGHEGREYLRDLPIYLVDKIGGNEVFGVY 138 (252)
T ss_dssp ---------HSCTTCS-SSG------GG-GGSSCCHHH---HHHHHHHHHHHHHHHHHHHHTSCSCEEEEETTEEEEEES
T ss_pred ---------ccccccC-Ccc------cc-cchhhhHHH---HHHHHHHHHHCCHHHHHHHHhCCceEEEeeCCcEEEEEc
Confidence 0000000 000 00 000000000 000 0000123578888876332221100123788999
Q ss_pred cccccCCCCCCCCcHHHHHHHHHHHHhc-CCcEEEecccccceeeecccCCCcCCCCcEEEEECCCCC
Q 012895 300 APWYNTNTAHQGEGESMRNSMEELLYNA-RVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGGN 366 (454)
Q Consensus 300 ~P~~~~~~~~~~~~~~~~~~l~~ll~~~-~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~ 366 (454)
++++...... .......+.+..++.++ +++++++||+|...... .+++++|..|+-|.
T Consensus 139 ~~p~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~vi~GHtH~~~~~~--------~~~~~~in~Gs~~~ 197 (252)
T 1nnw_A 139 GSPINPFDGE-VLAEQPTSYYEAIMRPVKDYEMLIVASPMYPVDAM--------TRYGRVVCPGSVGF 197 (252)
T ss_dssp SCSSCTTTCC-CCSSCCHHHHHHHHGGGTTSSEEEESTTCSEEEEE--------ETTEEEEEECCSSS
T ss_pred CCCCCCcccc-cCCCCCHHHHHHHHhcCCCCCEEEECCccccceEe--------cCCeEEEECCCccC
Confidence 8874322111 11111235677888888 99999999999854432 13678888887664
|
| >3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.37 E-value=2.5e-11 Score=107.49 Aligned_cols=159 Identities=14% Similarity=0.157 Sum_probs=100.9
Q ss_pred CeEEEEEecCCCCCC-hHHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCCCC
Q 012895 147 PIEFAIVGDLGQTEW-TNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPIIL 225 (454)
Q Consensus 147 ~~~f~~igD~~~~~~-~~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~ 225 (454)
.+|++++||+|.... ..++++.+.. ++|+|+++||+.+ +.++.+. .|+++++||||...
T Consensus 6 ~m~i~~isD~H~~~~~~~~~~~~~~~-~~d~i~~~GD~~~------------~~l~~l~--~~~~~v~GNhD~~~----- 65 (176)
T 3ck2_A 6 KQTIIVMSDSHGDSLIVEEVRDRYVG-KVDAVFHNGDSEL------------RPDSPLW--EGIRVVKGNMDFYA----- 65 (176)
T ss_dssp CEEEEEECCCTTCHHHHHHHHHHHTT-TSSEEEECSCCCS------------CTTCGGG--TTEEECCCTTCCST-----
T ss_pred CcEEEEEecCCCCHHHHHHHHHHhhc-CCCEEEECCCCch------------HHHHhhh--CCeEEecCcccchh-----
Confidence 489999999995421 1234455544 8999999999842 1223333 28999999999731
Q ss_pred cchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEEEEEccccccC
Q 012895 226 PHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNT 305 (454)
Q Consensus 226 ~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~ 305 (454)
.+|. .. .+.+ ..++|+++|.|++..
T Consensus 66 -----------~~p~---------~~--------~~~~---------------------------~~~~i~~~Hg~~~~~ 90 (176)
T 3ck2_A 66 -----------GYPE---------RL--------VTEL---------------------------GSTKIIQTHGHLFDI 90 (176)
T ss_dssp -----------TCCS---------EE--------EEEE---------------------------TTEEEEEECSGGGTT
T ss_pred -----------cCCc---------EE--------EEEE---------------------------CCeEEEEECCCccCC
Confidence 1121 00 0000 013789999988753
Q ss_pred CCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCCcCCCCcEEEEECCCCCCCCcccccCCCCCCCceee
Q 012895 306 NTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQ 385 (454)
Q Consensus 306 ~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~ 385 (454)
.. ..+.+.+++.+.+++++++||+|...... .+++.++..|+.|.+. +..|
T Consensus 91 ~~--------~~~~l~~~~~~~~~d~vi~GHtH~~~~~~--------~~~~~~inpGs~~~~~-------~~~~------ 141 (176)
T 3ck2_A 91 NF--------NFQKLDYWAQEEEAAICLYGHLHVPSAWL--------EGKILFLNPGSISQPR-------GTIR------ 141 (176)
T ss_dssp TT--------CSHHHHHHHHHTTCSEEECCSSCCEEEEE--------ETTEEEEEECCSSSCC-------TTCC------
T ss_pred CC--------CHHHHHHHHHhcCCCEEEECCcCCCCcEE--------ECCEEEEECCCCCcCC-------CCCC------
Confidence 21 11456777788999999999999855432 1467788888765421 1111
Q ss_pred ecccCEEEEEEecCCeEEEEEEEecCCC
Q 012895 386 ESSFGHARLKILDETRAHWSWYRNNDSD 413 (454)
Q Consensus 386 ~~~~G~~~l~v~~~~~~~~~~~~~~dg~ 413 (454)
..+|..+++. ...+.+++++. +|+
T Consensus 142 --~~~y~il~~~-~~~~~v~~~~~-~~~ 165 (176)
T 3ck2_A 142 --ECLYARVEID-DSYFKVDFLTR-DHE 165 (176)
T ss_dssp --SCCEEEEEEC-SSEEEEEEECT-TSC
T ss_pred --CCeEEEEEEc-CCEEEEEEEEE-CCE
Confidence 2478888874 45788888875 454
|
| >1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8 | Back alignment and structure |
|---|
Probab=99.27 E-value=3.4e-11 Score=108.44 Aligned_cols=137 Identities=15% Similarity=0.182 Sum_probs=84.5
Q ss_pred CeEEEEEecCCCCCCh--------------HHHHHHhhc--CCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCee
Q 012895 147 PIEFAIVGDLGQTEWT--------------NSTLDHVGS--KDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWM 210 (454)
Q Consensus 147 ~~~f~~igD~~~~~~~--------------~~~l~~i~~--~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~ 210 (454)
.+|++++||+|.+... ..+++.+++ .++|+|+++||+++.+ ..+..+.+.++.+. .|++
T Consensus 1 ~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vi~~GDl~~~~---~~~~~~~~~l~~l~--~~~~ 75 (195)
T 1xm7_A 1 NAMMYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHF---NDKNEYLRIWKALP--GRKI 75 (195)
T ss_dssp CCCEEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCS---CCTTSHHHHHHHSS--SEEE
T ss_pred CcEEEEEeccccCCCccccccCCCCHHHHHHHHHHHHHHhCCCCCEEEECCCCCCCc---hhHHHHHHHHHHCC--CCEE
Confidence 3689999999975432 123344443 5899999999999754 12233444455443 5899
Q ss_pred ecCCCcccCCCCCCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhccCC
Q 012895 211 VTEGNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKK 290 (454)
Q Consensus 211 ~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~ 290 (454)
+++||||... ..+...|. . +. +..||+ +. .
T Consensus 76 ~v~GNhD~~~---------~~~~~~~~--------------~----------l~----------~~~~l~----~~---~ 105 (195)
T 1xm7_A 76 LVMGNHDKDK---------ESLKEYFD--------------E----------IY----------DFYKII----EH---K 105 (195)
T ss_dssp EECCTTCCCH---------HHHTTTCS--------------E----------EE----------SSEEEE----EE---T
T ss_pred EEeCCCCCch---------hhhhhhhh--------------c----------hh----------HHHHHH----hc---C
Confidence 9999999831 11211110 0 00 111221 01 1
Q ss_pred CCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeccccccee
Q 012895 291 TPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYER 342 (454)
Q Consensus 291 ~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r 342 (454)
.++|+++|+|++....... ....+.+.+++.+++++++++||+|....
T Consensus 106 -~~~i~~~H~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~vi~GHtH~~~~ 153 (195)
T 1xm7_A 106 -GKRILLSHYPAKDPITERY---PDRQEMVREIYFKENCDLLIHGHVHWNRE 153 (195)
T ss_dssp -TEEEEEESSCSSCSSCCSC---HHHHHHHHHHHHHTTCSEEEECCCCCCSC
T ss_pred -CcEEEEEccCCcCCCcccc---cchHHHHHHHHHHcCCcEEEECCcCCCCc
Confidence 2479999999876543221 13457888889999999999999998544
|
| >3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0 | Back alignment and structure |
|---|
Probab=99.23 E-value=2.6e-11 Score=113.38 Aligned_cols=152 Identities=14% Similarity=0.137 Sum_probs=87.2
Q ss_pred CCeEEEEEecCCCCCCh-HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCCC
Q 012895 146 FPIEFAIVGDLGQTEWT-NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPII 224 (454)
Q Consensus 146 ~~~~f~~igD~~~~~~~-~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~ 224 (454)
..+|++++||+|..... .++++.+. ++|.++++||+++.+.... ...+.+..+ .+++++.||||.......
T Consensus 2 ~~mri~~isDiHg~~~~l~~~l~~~~--~~d~ii~~GDl~~~g~~~~---~~~~~l~~~---~~~~~v~GNhD~~~~~~~ 73 (246)
T 3rqz_A 2 NAMRILIISDVHANLVALEAVLSDAG--RVDDIWSLGDIVGYGPRPR---ECVELVRVL---APNISVIGNHDWACIGRL 73 (246)
T ss_dssp CCCCEEEECCCTTCHHHHHHHHHHHC--SCSEEEECSCCSSSSSCHH---HHHHHHHHH---CSSEECCCHHHHHHTCCC
T ss_pred CCcEEEEEeecCCCHHHHHHHHHhcc--CCCEEEECCCcCCCCCCHH---HHHHHHHhc---CCCEEEeCchHHHHhccC
Confidence 46899999999954321 23445554 9999999999997554322 223333333 236899999998421110
Q ss_pred CcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEEEEEcccccc
Q 012895 225 LPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYN 304 (454)
Q Consensus 225 ~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~ 304 (454)
.. . .+. .. .... +. +.......++++||++....... . .|+++|.++..
T Consensus 74 ~~---~----~~~-~~------~~~~------------~~-~~~~~l~~~~~~~L~~lp~~~~~-~---~i~~~Hg~p~~ 122 (246)
T 3rqz_A 74 SL---D----EFN-PV------ARFA------------SY-WTTMQLQAEHLQYLESLPNRMID-G---DWTVVHGSPRH 122 (246)
T ss_dssp CC---C------C-GG------GGCH------------HH-HHHHHCCHHHHHHHHHCCSEEEE-T---TEEEESSCSSS
T ss_pred Cc---c----ccC-HH------HHHH------------HH-HHHHHcCHHHHHHHHhCCcEEEE-C---CEEEEECCcCC
Confidence 00 0 000 00 0000 00 00012357889999864333322 1 47888987765
Q ss_pred CCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccc
Q 012895 305 TNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAY 340 (454)
Q Consensus 305 ~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y 340 (454)
..... ... ...+.++|.+++++++|+||+|..
T Consensus 123 ~~~~~-~~~---~~~~~~~l~~~~~~l~i~GHtH~p 154 (246)
T 3rqz_A 123 PIWEY-IYN---ARIAALNFPAFDTPLCFVGHTHVP 154 (246)
T ss_dssp TTTCC-CCS---HHHHHHHGGGCCSSEEECCSSSSE
T ss_pred ccccc-cCC---hHHHHHHHhccCCCEEEECCcCcc
Confidence 43111 111 256777889999999999999973
|
| >2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=99.21 E-value=4.8e-10 Score=99.32 Aligned_cols=62 Identities=18% Similarity=0.162 Sum_probs=43.8
Q ss_pred CCeEEEEEecCCCCC---ChHHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCccc
Q 012895 146 FPIEFAIVGDLGQTE---WTNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEI 218 (454)
Q Consensus 146 ~~~~f~~igD~~~~~---~~~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 218 (454)
.-+|++++||+|... ...+.++.+. .++|+|+++||+++. ...+.++.+. .|+++++||||.
T Consensus 21 ~mmri~~iSD~Hg~~~~~~l~~~l~~~~-~~~D~ii~~GD~~~~--------~~~~~l~~~~--~~v~~V~GNhD~ 85 (178)
T 2kkn_A 21 GVKRFLLISDSHVPVRMASLPDEILNSL-KEYDGVIGLGDYVDL--------DTVILLEKFS--KEFYGVHGNMDY 85 (178)
T ss_dssp -CEEEEEECCCCBTTTTCCCCHHHHHGG-GGCSEEEESSCBSCH--------HHHHHHHHHT--SSEEECCCSSSC
T ss_pred cceEEEEEecccCCCCHHHHHHHHHHHh-cCCCEEEECCCCCCH--------HHHHHHHhcC--CCEEEEECCCCc
Confidence 348999999999422 2345566654 789999999999851 2233334332 699999999997
|
| >1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A | Back alignment and structure |
|---|
Probab=99.20 E-value=7.6e-11 Score=115.29 Aligned_cols=72 Identities=22% Similarity=0.253 Sum_probs=53.5
Q ss_pred eEEEEEecCCCCCCh--------------HHHHHHhhcCCCCeEeecCccccCCCC-hhhHHHHhhhhhhhhc-CCCeee
Q 012895 148 IEFAIVGDLGQTEWT--------------NSTLDHVGSKDYDVFLLPGDLSYADFQ-QPLWDSFGRLVEPYAS-SRPWMV 211 (454)
Q Consensus 148 ~~f~~igD~~~~~~~--------------~~~l~~i~~~~pd~vl~~GDl~y~~~~-~~~~~~~~~~~~~l~~-~~P~~~ 211 (454)
+||++++|+|.+... .++++.+.+.+||+||++||+++.... ...+..+.+.++.+.. .+|+++
T Consensus 1 mkilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vl~~GDl~d~~~~~~~~~~~~~~~l~~l~~~~~~v~~ 80 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPVFA 80 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTTCCEEE
T ss_pred CEEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHhcCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHCCCcEEE
Confidence 689999999987531 234445567899999999999976433 2344556667777754 489999
Q ss_pred cCCCcccC
Q 012895 212 TEGNHEIE 219 (454)
Q Consensus 212 v~GNHD~~ 219 (454)
++||||..
T Consensus 81 v~GNHD~~ 88 (333)
T 1ii7_A 81 IEGNHDRT 88 (333)
T ss_dssp ECCTTTCC
T ss_pred eCCcCCCc
Confidence 99999985
|
| >1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A | Back alignment and structure |
|---|
Probab=99.18 E-value=9e-11 Score=105.21 Aligned_cols=63 Identities=14% Similarity=0.164 Sum_probs=44.5
Q ss_pred CeEEEEEecCCCCCC-hHHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccC
Q 012895 147 PIEFAIVGDLGQTEW-TNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIE 219 (454)
Q Consensus 147 ~~~f~~igD~~~~~~-~~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~ 219 (454)
.+|++++||+|.... ..++++.+...++|+|+++||+++. ...+.++.+ ..|+++++||||..
T Consensus 25 ~m~i~~iSD~Hg~~~~l~~~l~~~~~~~~D~ii~~GDl~~~--------~~~~~l~~l--~~~~~~V~GNhD~~ 88 (190)
T 1s3l_A 25 HMKIGIMSDTHDHLPNIRKAIEIFNDENVETVIHCGDFVSL--------FVIKEFENL--NANIIATYGNNDGE 88 (190)
T ss_dssp -CEEEEECCCTTCHHHHHHHHHHHHHSCCSEEEECSCCCST--------HHHHHGGGC--SSEEEEECCTTCCC
T ss_pred CeEEEEEeeCCCCHHHHHHHHHHHhhcCCCEEEECCCCCCH--------HHHHHHHhc--CCCEEEEeCCCcch
Confidence 499999999995321 1345566666899999999999852 122333332 37999999999983
|
| >3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.17 E-value=2.7e-09 Score=106.76 Aligned_cols=243 Identities=12% Similarity=0.085 Sum_probs=127.3
Q ss_pred CCCCCCeEEEEEecCCCCCCh-------------HHHHHHhhcCCCCeEeecCccccCCCC-hhhHHHHhhhhhhhh---
Q 012895 142 PPANFPIEFAIVGDLGQTEWT-------------NSTLDHVGSKDYDVFLLPGDLSYADFQ-QPLWDSFGRLVEPYA--- 204 (454)
Q Consensus 142 ~p~~~~~~f~~igD~~~~~~~-------------~~~l~~i~~~~pd~vl~~GDl~y~~~~-~~~~~~~~~~~~~l~--- 204 (454)
++....+||++++|+|.+... ..+++.+.+.+||+||++||+++.... ......+.+.++++.
T Consensus 27 ~~~~~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~~~~~~~~D~VliaGDlfd~~~~~~~~~~~~~~~L~r~~~~~ 106 (431)
T 3t1i_A 27 LDDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHENKPSRKTLHTCLELLRKYCMGD 106 (431)
T ss_dssp CCGGGEEEEEEECCCCBTTTSSCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBCS
T ss_pred CCCCCCEEEEEEeccCCCCcccccchhhhHHHHHHHHHHHHhhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHHhccC
Confidence 334678999999999986431 234555668899999999999976554 233344455555432
Q ss_pred -------------------------------cCCCeeecCCCcccCCCCCCCcchhhhhh------hhccCCCCCCCCCC
Q 012895 205 -------------------------------SSRPWMVTEGNHEIESIPIILPHAFKAYN------ARWLMPYEESGSSS 247 (454)
Q Consensus 205 -------------------------------~~~P~~~v~GNHD~~~~~~~~~~~~~~~~------~~~~~p~~~~~~~~ 247 (454)
..+|++++.||||....... ..+..+. ..|.... ...
T Consensus 107 ~~~~~~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~~g~~~--l~~~~lL~~~glv~~fg~~~----~~e 180 (431)
T 3t1i_A 107 RPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDPTGADA--LCALDILSCAGFVNHFGRSM----SVE 180 (431)
T ss_dssp SCCCCEECSCC------------------CCBCSCEEECCCSSSCCBTTTT--BCHHHHHHHHTSEEECCCCC----CSS
T ss_pred CcccceeccchhhccccccccccccccccccCCCcEEEEccCCCCcccccc--cCHHHHhccCCcEEEECCcC----ccc
Confidence 25999999999998532110 0111111 1121110 000
Q ss_pred Cc---eEEEEeCe--EEEEEecccCCCCCCHHHHHHHHHHHHh-----hcc---CCCCeEEEEEccccccCCCCCCCCcH
Q 012895 248 NL---YYSFDIAG--AHIIMLGSYTDFDEDSAQYKWLKADLAK-----INR---KKTPWIFVLLHAPWYNTNTAHQGEGE 314 (454)
Q Consensus 248 ~~---~ys~~~g~--v~fi~Lds~~~~~~~~~Q~~WL~~~L~~-----~~~---~~~~w~Iv~~H~P~~~~~~~~~~~~~ 314 (454)
.. ...+.-|+ +.+.++.. . ..+ .+.+.+.. ... ....+.|++.|......+....
T Consensus 181 ~i~~~Pv~l~~g~~~valyGl~~----~-~~~---~l~~~~~~~~v~~~~p~~~~~~~~~Ilv~H~~~~~~g~~~~---- 248 (431)
T 3t1i_A 181 KIDISPVLLQKGSTKIALYGLGS----I-PDE---RLYRMFVNKKVTMLRPKEDENSWFNLFVIHQNRSKHGSTNF---- 248 (431)
T ss_dssp CEEECCEEEEETTEEEEEEEECC----C-CHH---HHHHHHHTTCEEECCCSSCGGGEEEEEEECSCCSCSSSSSS----
T ss_pred ceeeEEEEEecCCEeEEEEeCCC----C-CHH---HHhhhhccccceeecccccCCCceEEEEECCCccCCCcccc----
Confidence 10 11233343 66666642 1 122 23333221 111 1223689999987632211110
Q ss_pred HHHHHHHHHHHhcCCcEEEecccccceeeecccCCCcCCCCcEEEEECCCCCCCCcccccCCCCCCCceeeecccCEEEE
Q 012895 315 SMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQESSFGHARL 394 (454)
Q Consensus 315 ~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l 394 (454)
+.+ -+...++|+++.||+|..+...... ...++..+-.|+-.. . .+.. -....-|+..|
T Consensus 249 -ip~----~l~~~~~Dyv~lGH~H~~~~~~~~~----~~~~~~i~yPGS~~~---~--s~~e-------~E~~~k~~~lv 307 (431)
T 3t1i_A 249 -IPE----QFLDDFIDLVIWGHEHECKIAPTKN----EQQLFYISQPGSSVV---T--SLSP-------GEAVKKHVGLL 307 (431)
T ss_dssp -CCG----GGSCTTCCEEEECSCCSCEEEEEEC----TTTCCEEEECCCSSC---C--SCCH-------HHHSCCEEEEE
T ss_pred -CCH----hHhhCCCCEEEeccccccccccccc----CCCCEEEEeCCCCcc---c--CcCc-------ccCCCCEEEEE
Confidence 111 1234579999999999976543111 012444343343211 1 1110 00123388899
Q ss_pred EEecCCeEEEEEEEecCCCceeeeEEEEEE
Q 012895 395 KILDETRAHWSWYRNNDSDAVIADEVRLES 424 (454)
Q Consensus 395 ~v~~~~~~~~~~~~~~dg~~~~~D~~~i~~ 424 (454)
++.+ ..+.++++..+.-..-+..++.+..
T Consensus 308 ei~~-~~~~ve~i~l~~~R~f~~~~v~l~~ 336 (431)
T 3t1i_A 308 RIKG-RKMNMHKIPLHTVRQFFMEDIVLAN 336 (431)
T ss_dssp EEET-TEEEEEEEECSSSCCEEEEEEEGGG
T ss_pred EEEC-CEEEEEEEECCCcceEEEEEEEEec
Confidence 9864 5788999987655544555555543
|
| >4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A* | Back alignment and structure |
|---|
Probab=99.17 E-value=1.8e-09 Score=108.38 Aligned_cols=244 Identities=14% Similarity=0.058 Sum_probs=123.9
Q ss_pred CCCCeEEEEEecCCCCCCh-------------HHHHHHhhcCCCCeEeecCccccCCCChh-hHHHHhhhhhh-------
Q 012895 144 ANFPIEFAIVGDLGQTEWT-------------NSTLDHVGSKDYDVFLLPGDLSYADFQQP-LWDSFGRLVEP------- 202 (454)
Q Consensus 144 ~~~~~~f~~igD~~~~~~~-------------~~~l~~i~~~~pd~vl~~GDl~y~~~~~~-~~~~~~~~~~~------- 202 (454)
....+||++++|+|.+... .++++.+.+.+||+||++||+++...... ....+.+.+++
T Consensus 73 ~~~~mrilhiSDlHLG~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~ps~~a~~~~~~~Lr~~~~g~~~ 152 (472)
T 4fbk_A 73 SENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGDKP 152 (472)
T ss_dssp CTTCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHBSSCC
T ss_pred CCCCeEEEEEecccCCCcccCcccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcccCCc
Confidence 3678999999999986431 24556666899999999999998665522 12222232222
Q ss_pred -----h----------------------hcCCCeeecCCCcccCCCCCCCcchhhhhhh------hccCCCCCCCCCCCc
Q 012895 203 -----Y----------------------ASSRPWMVTEGNHEIESIPIILPHAFKAYNA------RWLMPYEESGSSSNL 249 (454)
Q Consensus 203 -----l----------------------~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~------~~~~p~~~~~~~~~~ 249 (454)
| ...+|+|++.||||....... ........ .+.... ..++.
T Consensus 153 ~~~e~L~d~~~~~~~~~~~~vn~~dp~~~~gIpVf~I~GNHD~~~~~~~--~s~~~LL~~~g~v~l~g~~~----~~d~i 226 (472)
T 4fbk_A 153 CELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGDGR--YSALDILQVTGLVNYFGRVP----ENDNI 226 (472)
T ss_dssp CCCEEEEEC-----CCCSCSSSTTCTTBCBSSCEEECCCCCCSCCC--C--CCHHHHHHHTTSCEECCCCS----CSSSE
T ss_pred chheecchhhhhcccccccccccccccccCCCcEEEEecCCCCcccccc--ccHHHHhccCCcEEEeCCcc----cCCce
Confidence 1 125899999999998532210 00111111 111100 00010
Q ss_pred ---eEEEEeCe--EEEEEecccCCCCCCHHHH-HHHHHHHHh-hcc---CCCCeEEEEEccccccCCCCCCCCcHHHHHH
Q 012895 250 ---YYSFDIAG--AHIIMLGSYTDFDEDSAQY-KWLKADLAK-INR---KKTPWIFVLLHAPWYNTNTAHQGEGESMRNS 319 (454)
Q Consensus 250 ---~ys~~~g~--v~fi~Lds~~~~~~~~~Q~-~WL~~~L~~-~~~---~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~ 319 (454)
-..+..|+ +.+.++.-. . .+.+ .++.+.... ... ....+.|++.|........... ..+.
T Consensus 227 ~~~pv~l~kg~~~valyGl~y~----~-d~rl~r~~~e~~v~~~~p~~~~~~~~nIlvlH~~~~~~~~~~y-----ipe~ 296 (472)
T 4fbk_A 227 VVSPILLQKGFTKLALYGISNV----R-DERLYHSFRENKVKFLRPDLYRDEWFNLLTVHQNHSAHTPTSY-----LPES 296 (472)
T ss_dssp EECCEEEEETTEEEEEEECCCC----C-HHHHHHHHHTTCEEEEEESTTGGGEEEEEEEESCSCCSSTTSS-----CCGG
T ss_pred eEEEEEEEeCCceEEEEecCCC----c-hhhhhhhhhhhhhhhhCcccccCCceEEEEecCCccCCCcccc-----CChh
Confidence 11233443 555555321 1 2221 222221111 111 1233689999987654321110 0011
Q ss_pred HHHHHHhcCCcEEEecccccceeeecccCCCcCCCCcEEEEECCCCCCCCcccccCCCCCCCceeeecccCEEEEEEecC
Q 012895 320 MEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQESSFGHARLKILDE 399 (454)
Q Consensus 320 l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~ 399 (454)
+...++|+|+.||+|..+...... ..++...+..|+-. +. .+... + ...-|+..|++.+
T Consensus 297 ----ll~~g~DyValGH~H~~~~~~~~~----~~~g~~ivyPGS~~---~~--s~~e~--E-----~~~kg~~lveI~~- 355 (472)
T 4fbk_A 297 ----FIQDFYDFVLWGHEHECLIDGSYN----PTQKFTVVQPGSTI---AT--SLSPG--E-----TAPKHCGILNITG- 355 (472)
T ss_dssp ----GSCTTCSEEEEESCCSCEEEEEEE----TTTTEEEEECCCSS---CS--SCCGG--G-----CSCCEEEEEEEET-
T ss_pred ----hhhcCCCEEEecCcccceeeeccc----CCCCeEEEECCCcc---cc--ccCcc--C-----CCCCEEEEEEEEC-
Confidence 234579999999999966542100 01233333334321 11 11100 0 0234888999854
Q ss_pred CeEEEEEEEecCCCceeeeEEEEEE
Q 012895 400 TRAHWSWYRNNDSDAVIADEVRLES 424 (454)
Q Consensus 400 ~~~~~~~~~~~dg~~~~~D~~~i~~ 424 (454)
..+.++++..+.-..-+..++.+..
T Consensus 356 ~~v~ve~I~L~t~Rpf~~~~i~L~~ 380 (472)
T 4fbk_A 356 KDFHLEKIRLRTVRPFIMKDIILSE 380 (472)
T ss_dssp TEEEEEEEECSSSCCEEEEEEEGGG
T ss_pred CEEEEEEEECCCcccEEEEEEEEec
Confidence 5788999987665545555655543
|
| >4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B* | Back alignment and structure |
|---|
Probab=99.16 E-value=1.5e-09 Score=108.18 Aligned_cols=246 Identities=13% Similarity=0.053 Sum_probs=123.8
Q ss_pred CCCCeEEEEEecCCCCCCh-------------HHHHHHhhcCCCCeEeecCccccCCCChh-hHHHHhhhhhh-------
Q 012895 144 ANFPIEFAIVGDLGQTEWT-------------NSTLDHVGSKDYDVFLLPGDLSYADFQQP-LWDSFGRLVEP------- 202 (454)
Q Consensus 144 ~~~~~~f~~igD~~~~~~~-------------~~~l~~i~~~~pd~vl~~GDl~y~~~~~~-~~~~~~~~~~~------- 202 (454)
....+||++++|+|.+... .++++.+.+.+||+||++||+++...... ....+.+.+++
T Consensus 10 ~~~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~p~~~~~~~~~~~lr~~~~g~~~ 89 (417)
T 4fbw_A 10 NENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGDKP 89 (417)
T ss_dssp CTTCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBSSCC
T ss_pred CCCCeEEEEEEcCCCCCcccccccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcccCCc
Confidence 3678999999999987431 23555566889999999999997665422 12222233222
Q ss_pred -----h----------------------hcCCCeeecCCCcccCCCCCCCcchhhhhh-----hhccCCCCCCCCCCCc-
Q 012895 203 -----Y----------------------ASSRPWMVTEGNHEIESIPIILPHAFKAYN-----ARWLMPYEESGSSSNL- 249 (454)
Q Consensus 203 -----l----------------------~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~-----~~~~~p~~~~~~~~~~- 249 (454)
| ...+|+|++.||||....... ......+. ..+.... ..++.
T Consensus 90 ~~~e~L~d~~~~~~~~~~~~~n~~d~~~~~gIpV~~I~GNHD~~~~~~~-~s~~~lL~~~g~v~l~g~~~----~~~~i~ 164 (417)
T 4fbw_A 90 CELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGDGR-YSALDILQVTGLVNYFGRVP----ENDNIV 164 (417)
T ss_dssp CCCEECC------------CCGGGCTTBCBSSCEEECCCGGGC-----C-CCHHHHHHHTTSCEECCCCC-------CEE
T ss_pred ccceeccchhhhcccccccccccccccccCCCeEEEEecCCCCcccccc-ccHHHHhccCCeEEEeCCcc----cCCcee
Confidence 2 125999999999998532110 00011110 0111000 00010
Q ss_pred --eEEEEeCe--EEEEEecccCCCCCCHHHH-HHHHHHHHh-hcc---CCCCeEEEEEccccccCCCCCCCCcHHHHHHH
Q 012895 250 --YYSFDIAG--AHIIMLGSYTDFDEDSAQY-KWLKADLAK-INR---KKTPWIFVLLHAPWYNTNTAHQGEGESMRNSM 320 (454)
Q Consensus 250 --~ys~~~g~--v~fi~Lds~~~~~~~~~Q~-~WL~~~L~~-~~~---~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l 320 (454)
-..+..|+ +.+.++... . .+.+ .++.+.... ... ....+.|++.|............ . +
T Consensus 165 ~~pv~l~~g~~~valyG~~~~----~-d~rl~r~~~~~~v~~~~p~~~~~~~~nIlvlH~~~~~~~~~~yi-p----~-- 232 (417)
T 4fbw_A 165 VSPILLQKGFTKLALYGISNV----R-DERLYHSFRENKVKFLRPDLYRDEWFNLLTVHQNHSAHTPTSYL-P----E-- 232 (417)
T ss_dssp ECCEEEEETTEEEEEEEECCC----C-HHHHHHHHHTTCEEEEEESTTTTTSEEEEEEESCSSCSSSSSSC-C----G--
T ss_pred EEeEEEEecCceEEEEeccCC----c-hhhhhhhhhhhhhhhcCcccccCCceEEEEecCCccCCCCcccC-c----h--
Confidence 11233343 555556421 1 2221 222221111 111 13457899999876433211100 0 1
Q ss_pred HHHHHhcCCcEEEecccccceeeecccCCCcCCCCcEEEEECCCCCCCCcccccCCCCCCCceeeecccCEEEEEEecCC
Q 012895 321 EELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQESSFGHARLKILDET 400 (454)
Q Consensus 321 ~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~ 400 (454)
-+...++|+++.||+|..+...... ..+++..+..|+-.. . .+.. -....-|+..|++.+ .
T Consensus 233 --~l~~~~~DyvalGH~H~~~~~~~~~----~~~g~~i~~PGS~~~---~--s~~e-------~E~~~kg~~lvei~~-~ 293 (417)
T 4fbw_A 233 --SFIQDFYDFVLWGHEHECLIDGSYN----PTQKFTVVQPGSTIA---T--SLSP-------GETAPKHCGILNITG-K 293 (417)
T ss_dssp --GGSCTTCSEEEEESCCSCEEEEEEE----TTTTEEEEECCCSSC---S--SCCH-------HHHSCCEEEEEEEET-T
T ss_pred --hHhhcCCCEEEecCccccceecccc----CCCCEEEEECCCCCc---C--CCcc-------ccCCCCEEEEEEEEC-C
Confidence 1345679999999999966542100 012444444443221 1 1110 001234888999865 5
Q ss_pred eEEEEEEEecCCCceeeeEEEEEEc
Q 012895 401 RAHWSWYRNNDSDAVIADEVRLESL 425 (454)
Q Consensus 401 ~~~~~~~~~~dg~~~~~D~~~i~~~ 425 (454)
.+.++++..+.-..-+..++.+...
T Consensus 294 ~~~~e~i~l~~~Rpf~~~~v~L~~~ 318 (417)
T 4fbw_A 294 DFHLEKIRLRTVRPFIMKDIILSEV 318 (417)
T ss_dssp EEEEEEEECSSSCCEEEEEEEGGGC
T ss_pred EEEEEEEECCCcccEEEEEEEeecc
Confidence 6888998876545445666655443
|
| >1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=98.87 E-value=1.9e-08 Score=91.25 Aligned_cols=70 Identities=11% Similarity=0.129 Sum_probs=47.7
Q ss_pred CeEEEEEecCCCCCC-hHHHHHHhhcCCCCeEeecCccccCCCC---hhhH--HHHhhhhhhhhcCCCeeecCCCccc
Q 012895 147 PIEFAIVGDLGQTEW-TNSTLDHVGSKDYDVFLLPGDLSYADFQ---QPLW--DSFGRLVEPYASSRPWMVTEGNHEI 218 (454)
Q Consensus 147 ~~~f~~igD~~~~~~-~~~~l~~i~~~~pd~vl~~GDl~y~~~~---~~~~--~~~~~~~~~l~~~~P~~~v~GNHD~ 218 (454)
.+|++++||+|.... ..++++.++..++|+|+++||+++.+.. ...| ....+.++.+. .|+++++||||.
T Consensus 25 mmki~~iSD~H~~~~~l~~~l~~~~~~~~d~vi~~GDl~~~g~~~~~~~~~~~~~~~~~l~~~~--~~v~~V~GNHD~ 100 (208)
T 1su1_A 25 MMKLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEVA--HKVIAVRGNCDS 100 (208)
T ss_dssp CCEEEEECCCTTBHHHHHHHHHHHHHHTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTTG--GGEEECCCTTCC
T ss_pred cEEEEEEEcCCCCHHHHHHHHHHHHhcCCCEEEECCCccccCcccccccccCHHHHHHHHHhcC--CceEEEECCCch
Confidence 489999999996532 2345556656789999999999975432 1111 33344444432 589999999998
|
| >1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A | Back alignment and structure |
|---|
Probab=98.83 E-value=7.7e-09 Score=107.07 Aligned_cols=188 Identities=15% Similarity=0.146 Sum_probs=94.7
Q ss_pred CCCeEEEEEecCCCCCCh-----------HHHHHHhhcC----CC-CeEeecCccccCCCChh--hHHHHhhhhhhhhcC
Q 012895 145 NFPIEFAIVGDLGQTEWT-----------NSTLDHVGSK----DY-DVFLLPGDLSYADFQQP--LWDSFGRLVEPYASS 206 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~~-----------~~~l~~i~~~----~p-d~vl~~GDl~y~~~~~~--~~~~~~~~~~~l~~~ 206 (454)
...++|++++|+|..... ...++++++. ++ +++|.+||++....... ..+...+.+..+
T Consensus 6 ~~~l~Il~~~D~H~~~~~~~~~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~~~~~~~~~~~~~~~ln~l--- 82 (516)
T 1hp1_A 6 TYKITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLV--- 82 (516)
T ss_dssp CEEEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSCHHHHTTTTHHHHHHHHHH---
T ss_pred ceEEEEEEecccccCccCCCCCCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCcchhhhcCCcHHHHHHhcc---
Confidence 346899999999975321 2345555432 46 79999999985322110 112223334443
Q ss_pred CCeeecCCCcccCCCCCCCcchhhhhhhhccCCCCCC-------CC-CCCceEEEEeCe--EEEEEecccCC--CC-C--
Q 012895 207 RPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEES-------GS-SSNLYYSFDIAG--AHIIMLGSYTD--FD-E-- 271 (454)
Q Consensus 207 ~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~-------~~-~~~~~ys~~~g~--v~fi~Lds~~~--~~-~-- 271 (454)
-+-++++||||+.... ..+..+.+....|.-.. +. ....|..++.++ +-|+++.+... +. .
T Consensus 83 g~d~~~~GNHEfd~g~----~~l~~~~~~~~~~~l~aNv~~~~~g~~~~~~~~i~~~~G~kIgiiG~~~~~~~~~~~p~~ 158 (516)
T 1hp1_A 83 GYDAMAIGNHEFDNPL----TVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGNPEY 158 (516)
T ss_dssp TCCEEECCGGGGSSCH----HHHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEECTTTTTSSSCCS
T ss_pred CCCEEeeccccccCCH----HHHHHHHhhCCCCEEEeEEEECCCCCcccCCeEEEEECCEEEEEEEecccCcccccCcCc
Confidence 2447799999995321 12222222222222110 10 012355677887 55666654221 11 0
Q ss_pred --C---HHHHHHHHHHHHhhcc-CCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccce
Q 012895 272 --D---SAQYKWLKADLAKINR-KKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYE 341 (454)
Q Consensus 272 --~---~~Q~~WL~~~L~~~~~-~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~ 341 (454)
+ ..-.+-+++.+++.+. .+.+.+|+++|.|....... +........+.+.+...++|++|+||.|...
T Consensus 159 ~~~~~~~d~~~~~~~~v~~l~~~~~~d~iI~l~H~g~~~~~~~--~~~~~~~~~la~~~~~~~iDlilgGHtH~~~ 232 (516)
T 1hp1_A 159 FTDIEFRKPADEAKLVIQELQQTEKPDIIIAATHMGHYDNGEH--GSNAPGDVEMARALPAGSLAMIVGGHSQDPV 232 (516)
T ss_dssp CTTEEECCHHHHHHHHHHHHHHHTCCSEEEEEEESCCCGGGCC--TTSCCCHHHHHHHSCTTSSSEEECCSSCCBC
T ss_pred cCCcEEeCHHHHHHHHHHHHHhcCCCCEEEEEecCCccCCCcc--cccCchHHHHHHhCCCCceeEEECCCCCccc
Confidence 0 0111222333332221 14567999999997543211 1110111234433344569999999999854
|
| >2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=98.78 E-value=1.4e-08 Score=105.81 Aligned_cols=175 Identities=18% Similarity=0.098 Sum_probs=93.9
Q ss_pred CCCeEEEEEecCCCCCC------------------hHHHHHHhhcCCCC-eEeecCccccCCCChhhHHHHhhhhhhhhc
Q 012895 145 NFPIEFAIVGDLGQTEW------------------TNSTLDHVGSKDYD-VFLLPGDLSYADFQQPLWDSFGRLVEPYAS 205 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~------------------~~~~l~~i~~~~pd-~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~ 205 (454)
...+||++++|+|.... ....++++++.+|| ++|.+||++...... .+......++.+..
T Consensus 27 ~~~l~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r~~~~~~l~l~~GD~~~gs~~~-~~~~~~~~~~~ln~ 105 (552)
T 2z1a_A 27 GFTLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLYF-NQYRGLADRYFMHR 105 (552)
T ss_dssp -CEEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHHH-HHHTTHHHHHHHHH
T ss_pred CeeEEEEEEcccccCcccccccCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCcHHH-HHhCCcHHHHHHHh
Confidence 46799999999996411 12355666667788 889999998743221 11111122232322
Q ss_pred CCCeeecCCCcccCCCCCCCcchhhhhhhhccCCCCCC-----CC-----CCCceEEEEeCe--EEEEEecccC-----C
Q 012895 206 SRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEES-----GS-----SSNLYYSFDIAG--AHIIMLGSYT-----D 268 (454)
Q Consensus 206 ~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~-----~~-----~~~~~ys~~~g~--v~fi~Lds~~-----~ 268 (454)
--+-++++||||+.... ..+..+.+....|.-.. +. ....|..++.++ +.|+++.+.. .
T Consensus 106 lg~d~~~lGNHEfd~g~----~~l~~~l~~~~~~~L~aNv~~~~~~~~~~~~~~~~i~~~~G~kIgiiG~~~~~~~~~~~ 181 (552)
T 2z1a_A 106 LRYRAMALGNHEFDLGP----GPLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTTPDTREISN 181 (552)
T ss_dssp TTCCEEECCGGGGTTCH----HHHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEECTTHHHHSC
T ss_pred cCCCccccccccccCCH----HHHHHHHhhCCCCEEEEEEecCCCcccccccCCeEEEEECCEEEEEEEecccchhhccC
Confidence 23457899999995421 12333333222222110 00 012456677887 5566665421 0
Q ss_pred C--C----CCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHh-cCCcEEEecccccce
Q 012895 269 F--D----EDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYN-ARVDVVFAGHVHAYE 341 (454)
Q Consensus 269 ~--~----~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~-~~v~lvl~GH~H~y~ 341 (454)
. . ...++.+.+.++|++ ++.+.+|++.|.|.... ..+..+ .+||++|+||.|...
T Consensus 182 ~~~~~~~~d~~~~~~~~v~~l~~---~~~d~iIvL~H~g~~~d---------------~~la~~~~gvDlIlgGHtH~~~ 243 (552)
T 2z1a_A 182 PGPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGYGED---------------LKLARRLVGVQVIVGGHSHTLL 243 (552)
T ss_dssp CCTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHHHH---------------HHHHTTCSSCCEEEECSSCCCB
T ss_pred CCCCcEECCHHHHHHHHHHHHHh---cCCCEEEEEeCCCcchH---------------HHHHHhCCCccEEEeCCcCccc
Confidence 0 0 011333333334443 24567999999985210 122233 579999999999854
Q ss_pred e
Q 012895 342 R 342 (454)
Q Consensus 342 r 342 (454)
.
T Consensus 244 ~ 244 (552)
T 2z1a_A 244 G 244 (552)
T ss_dssp S
T ss_pred c
Confidence 3
|
| >3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=98.77 E-value=9.4e-08 Score=99.07 Aligned_cols=190 Identities=19% Similarity=0.182 Sum_probs=96.2
Q ss_pred CCCeEEEEEecCCCCCC-----------------hHHHHHHhhcCCCC-eEeecCccccCCCChhhHHH----Hhhhhhh
Q 012895 145 NFPIEFAIVGDLGQTEW-----------------TNSTLDHVGSKDYD-VFLLPGDLSYADFQQPLWDS----FGRLVEP 202 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~-----------------~~~~l~~i~~~~pd-~vl~~GDl~y~~~~~~~~~~----~~~~~~~ 202 (454)
...++|++++|+|.... ....++++++..++ ++|.+||++........... ....++.
T Consensus 17 ~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~~~~~~ 96 (527)
T 3qfk_A 17 GSNIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFLQGSPFCNYLIAHSGSSQPLVDF 96 (527)
T ss_dssp -CEEEEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHTTSSEEEEEECSCCSSSSHHHHHHHHTTCSSHHHHHH
T ss_pred CCcEEEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHhcCCCEEEEECCCcCCCcHHHHHHhhcccCcchHHHH
Confidence 46799999999996421 12456666677777 67779999864322110000 0122222
Q ss_pred hhcCCCeeecCCCcccCCCCCCCcchhhhhhhhccCCCCCC-----CC--CCCceEEEEeCe--EEEEEecccC--CCCC
Q 012895 203 YASSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEES-----GS--SSNLYYSFDIAG--AHIIMLGSYT--DFDE 271 (454)
Q Consensus 203 l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~-----~~--~~~~~ys~~~g~--v~fi~Lds~~--~~~~ 271 (454)
+..--+-++++||||+.... ..+..+.+....|.-.. +. ....|.-++.++ +-||++.+.. .+..
T Consensus 97 ln~lg~D~~t~GNHefd~G~----~~l~~~~~~~~~p~l~aNv~~~g~p~~~~py~i~e~~G~kIgviG~~~~~~~~~~~ 172 (527)
T 3qfk_A 97 YNRMAFDFGTLGNHEFNYGL----PYLKDTLRRLNYPVLCANIYENDSTLTDNGVKYFQVGDQTVGVIGLTTQFIPHWEQ 172 (527)
T ss_dssp HHHTCCCEECCCGGGGTTCH----HHHHHHHHHCSSCBCCSSEEETTEESSSCSEEEEEETTEEEEEEEEECTTGGGTSC
T ss_pred HHhcCCcEEeccccccccCH----HHHHHHHHhCCCCEEEeEeeeCCCCccCCCEEEEEECCEEEEEEEeccCCcccccC
Confidence 32223345689999985432 13333333333332211 10 012356677887 4556665421 1110
Q ss_pred --------CHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCC------CCCcHHHHHHHHHHHHhcCCcEEEeccc
Q 012895 272 --------DSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAH------QGEGESMRNSMEELLYNARVDVVFAGHV 337 (454)
Q Consensus 272 --------~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~------~~~~~~~~~~l~~ll~~~~v~lvl~GH~ 337 (454)
-....+.+++.+++.+. +.+.+|+++|.+.-...... .++. ...++.+-+ ..+||++|+||.
T Consensus 173 ~~~~~g~~~~d~~~~~~~~v~~l~~-~~D~iIvl~H~G~~~d~~~~~~~~~~~~e~--~~~~la~~~-~~giDlIlgGHt 248 (527)
T 3qfk_A 173 PEHIQSLTFHSAFEILQQYLPEMKR-HADIIVVCYHGGFEKDLESGTPTEVLTGEN--EGYAMLEAF-SKDIDIFITGHQ 248 (527)
T ss_dssp HHHHTTEEECCHHHHHHHHHHHHHH-HCSEEEEEEECCCSBCTTTCCBSSCCSSSC--CHHHHHHHH-GGGCSEEECCSS
T ss_pred ccccCCcEEcCHHHHHHHHHHHHHh-CCCEEEEEeCcCcccccccCccccccccch--HHHHHHHhc-CCCCcEEEECCC
Confidence 01223444444444432 56778999998753221100 1111 111232222 247999999999
Q ss_pred cccee
Q 012895 338 HAYER 342 (454)
Q Consensus 338 H~y~r 342 (454)
|....
T Consensus 249 H~~~~ 253 (527)
T 3qfk_A 249 HRQIA 253 (527)
T ss_dssp CCEEE
T ss_pred Ccccc
Confidence 98543
|
| >4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A* | Back alignment and structure |
|---|
Probab=98.63 E-value=6.8e-08 Score=100.51 Aligned_cols=176 Identities=14% Similarity=0.141 Sum_probs=93.6
Q ss_pred CCCeEEEEEecCCCCCC---------------------hHHHHHHhhcCCC-CeEeecCccccCCCChh--hHHHHhhhh
Q 012895 145 NFPIEFAIVGDLGQTEW---------------------TNSTLDHVGSKDY-DVFLLPGDLSYADFQQP--LWDSFGRLV 200 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~---------------------~~~~l~~i~~~~p-d~vl~~GDl~y~~~~~~--~~~~~~~~~ 200 (454)
...++|++++|+|.... ....++++++.+| +++|.+||++....... ......+.+
T Consensus 23 ~~~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l 102 (546)
T 4h2g_A 23 PWELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHFM 102 (546)
T ss_dssp CEEEEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHHHHHHTTHHHHHHH
T ss_pred ceEEEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhhCCCEEEEECCccCCCchhhhhhCChHHHHHH
Confidence 46799999999985321 1234566665566 58999999997543211 112223333
Q ss_pred hhhhcCCCeeecCCCcccCCCCCCCcchhh-hhhhhccCCCCCCC---C---------CCCceEEEEeCeEE--EEEecc
Q 012895 201 EPYASSRPWMVTEGNHEIESIPIILPHAFK-AYNARWLMPYEESG---S---------SSNLYYSFDIAGAH--IIMLGS 265 (454)
Q Consensus 201 ~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~-~~~~~~~~p~~~~~---~---------~~~~~ys~~~g~v~--fi~Lds 265 (454)
..+ -+-++++||||+.... ..+. .+.+....|..... . ....|.-++.++++ ||++.+
T Consensus 103 n~l---g~d~~~~GNHEfd~g~----~~l~~~~~~~~~~~~l~aNv~~~~~~~p~~~~~~~~~~i~~~~G~kIgiiG~~~ 175 (546)
T 4h2g_A 103 NAL---RYDAMALGNHEFDNGV----EGLIEPLLKEAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVGYTS 175 (546)
T ss_dssp HHH---TCSEEECCGGGGTTHH----HHHHTTTTTTCSSCEECSSEEECHHHHHHHBTTBBSEEEEEETTEEEEEEEEEC
T ss_pred Hhc---CCcEEeccCcccccCH----HHHHHHHHhhcCCCEEEEEeecCCCCCccccccCCCeEEEEECCEEEEEEEecc
Confidence 333 2336789999995321 1122 22222222221110 0 01345667788754 555543
Q ss_pred cCC--C-CCC-----HHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeccc
Q 012895 266 YTD--F-DED-----SAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHV 337 (454)
Q Consensus 266 ~~~--~-~~~-----~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~ 337 (454)
... + ... ....+.+++.+++.+.++.+.+|++.|.+... ...+...+ .+||++|+||.
T Consensus 176 ~~~~~~~~~~~~~~~~d~~~~~~~~v~~l~~~g~D~iI~l~H~g~~~------------d~~la~~~--~giDlIlgGHt 241 (546)
T 4h2g_A 176 KETPFLSNPGTNLVFEDEITALQPEVDKLKTLNVNKIIALGHSGFEM------------DKLIAQKV--RGVDVVVGGHS 241 (546)
T ss_dssp TTHHHHSCCCSSEEECCHHHHHHHHHHHHHHTTCCCEEEEEESCHHH------------HHHHHHHS--TTCCEEECCSS
T ss_pred cccccccCCCCCcEEccHHHHHHHHHHHHHhcCCCEEEEEeccCccc------------hHHHHHhC--CCCcEEEeCCc
Confidence 210 0 000 12344455555554433567799999987421 12222222 37999999999
Q ss_pred ccce
Q 012895 338 HAYE 341 (454)
Q Consensus 338 H~y~ 341 (454)
|...
T Consensus 242 H~~~ 245 (546)
T 4h2g_A 242 NTFL 245 (546)
T ss_dssp CCCC
T ss_pred Cccc
Confidence 9843
|
| >2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A | Back alignment and structure |
|---|
Probab=98.61 E-value=4.9e-07 Score=94.18 Aligned_cols=150 Identities=12% Similarity=0.063 Sum_probs=78.4
Q ss_pred HHHHhhcC--C--CC-eEeecCccccCCCChhhH---HHHhhhhhhhhcCCCeeecCCCcccCCCCCCCcchhhhhhhhc
Q 012895 165 TLDHVGSK--D--YD-VFLLPGDLSYADFQQPLW---DSFGRLVEPYASSRPWMVTEGNHEIESIPIILPHAFKAYNARW 236 (454)
Q Consensus 165 ~l~~i~~~--~--pd-~vl~~GDl~y~~~~~~~~---~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~ 236 (454)
.++++++. + || ++|.+||++..... ..+ ....+.+..+. .+++ + ||||+.... ..+..+.+.+
T Consensus 110 ~v~~~r~~~~~~gpd~Lll~~GD~~~gs~~-~~~~~g~~~~~~ln~lg--~d~~-~-GNHEfd~G~----~~l~~~l~~~ 180 (562)
T 2wdc_A 110 LIRDQKARVEAEGGKALVLDGGDTWTNSGL-SLLTRGEAVVRWQNLVG--VDHM-V-SHWEWTLGR----ERVEELLGLF 180 (562)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSCCSSSSHH-HHHHTTHHHHHHHHHHT--CCEE-C-CSGGGGGCH----HHHHHHHHHC
T ss_pred HHHHHHhhhhcCCCCEEEEeCCCCCCcchh-hhhhCCHHHHHHHHhhC--CcEE-e-cchhcccCH----HHHHHHHHhC
Confidence 34555443 4 88 88999999974331 111 22334444443 5665 7 999985321 2333333333
Q ss_pred cCCCCCC-------CC-CCCceEEEEeCe--EEEEEecccC-----------C--CCCCHHHHHHHHHHHHhhccCCCCe
Q 012895 237 LMPYEES-------GS-SSNLYYSFDIAG--AHIIMLGSYT-----------D--FDEDSAQYKWLKADLAKINRKKTPW 293 (454)
Q Consensus 237 ~~p~~~~-------~~-~~~~~ys~~~g~--v~fi~Lds~~-----------~--~~~~~~Q~~WL~~~L~~~~~~~~~w 293 (454)
..|.-.. +. .-..|.-++.++ +-||++.+.. . +....+..+-+.++|++ ++.+.
T Consensus 181 ~~p~L~aNv~~~~~~~~~~~py~i~e~~G~kIgiiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~---~~~d~ 257 (562)
T 2wdc_A 181 RGEFLSYNIVDDLFGDPLFPAYRIHRVGPYALAVVGASYPYVKVSHPESFTEGLSFALDERRLQEAVDKARA---EGANA 257 (562)
T ss_dssp CSEECCSSCEETTTCCBSSCSEEEEEETTEEEEEEEECCTTHHHHSCGGGGTTEECCCCHHHHHHHHHHHHH---TTCSE
T ss_pred CCCEEEEEEEecCCCCcccCCeEEEEECCeEEEEEeeccCcccccccccccCCcEEeCHHHHHHHHHHHHHH---CCCCE
Confidence 3332211 10 012355667777 5566665421 0 11122333322333332 25567
Q ss_pred EEEEEccccccCCCCCCCCcHHHHHHHHHHHHh-cCCcEEEecccccce
Q 012895 294 IFVLLHAPWYNTNTAHQGEGESMRNSMEELLYN-ARVDVVFAGHVHAYE 341 (454)
Q Consensus 294 ~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~-~~v~lvl~GH~H~y~ 341 (454)
+|++.|.|... .. .+.++ .++|++|+||.|...
T Consensus 258 iIvLsH~g~~~------------d~---~la~~~~giDlIlgGHtH~~~ 291 (562)
T 2wdc_A 258 VVLLSHNGMQL------------DA---ALAERIRGIDLILSGHTHDLT 291 (562)
T ss_dssp EEEEECSCHHH------------HH---HHHTTSSSCCEEEECSSCCCC
T ss_pred EEEEeCCCCcc------------hH---HHHhcCCCCcEEEeCCCCCCC
Confidence 99999998521 01 23333 479999999999854
|
| >3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A* | Back alignment and structure |
|---|
Probab=98.59 E-value=2.5e-07 Score=96.89 Aligned_cols=175 Identities=17% Similarity=0.143 Sum_probs=93.5
Q ss_pred CCeEEEEEecCCCCCCh----------------------HHHHHHhhcCCCC-eEeecCccccCCCChh--hHHHHhhhh
Q 012895 146 FPIEFAIVGDLGQTEWT----------------------NSTLDHVGSKDYD-VFLLPGDLSYADFQQP--LWDSFGRLV 200 (454)
Q Consensus 146 ~~~~f~~igD~~~~~~~----------------------~~~l~~i~~~~pd-~vl~~GDl~y~~~~~~--~~~~~~~~~ 200 (454)
-.++|++++|+|..... ...++++++..++ ++|.+||++....... ......+.+
T Consensus 11 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l 90 (579)
T 3ztv_A 11 VELSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKYKNPLVLHAGDAITGTLYFTLFGGSADAAVM 90 (579)
T ss_dssp EEEEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSCSSHHHHTTTTHHHHHHH
T ss_pred eEEEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCceeeeecCCHHHHHHH
Confidence 45899999999954211 2345566655666 8899999997542111 112222333
Q ss_pred hhhhcCCCeeecCCCcccCCCCCCCcchhhhhhhhccCCCCCC------CCC----CCceEEEEeCe--EEEEEecc-c-
Q 012895 201 EPYASSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEES------GSS----SNLYYSFDIAG--AHIIMLGS-Y- 266 (454)
Q Consensus 201 ~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~------~~~----~~~~ys~~~g~--v~fi~Lds-~- 266 (454)
..+ -+-++++||||+.... ..+..+.+....|.... +.. -..|.-++.++ +-||++.+ .
T Consensus 91 n~l---g~D~~tlGNHEfd~G~----~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~i~~~~G~kIgviG~t~~~~ 163 (579)
T 3ztv_A 91 NAG---NFHYFTLGNHEFDAGN----EGLLKLLEPLKIPVLSANVIPDKSSILYNKWKPYDIFTVDGEKIAIIGLDTVNK 163 (579)
T ss_dssp HHH---TCSEEECCSGGGTTHH----HHHHHHHTTCCSCEECSSEEECTTSTTTTSCBSEEEEEETTEEEEEEEEECSHH
T ss_pred Hhc---CcCeeeccccccccCH----HHHHHHHHhcCCCeeeeeEeccCCcccccccCCeEEEEECCEEEEEEEEEcCCc
Confidence 333 3345789999985321 12333333333332110 110 12355677887 55667643 1
Q ss_pred ----CCCCCC---HHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeccccc
Q 012895 267 ----TDFDED---SAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHA 339 (454)
Q Consensus 267 ----~~~~~~---~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~ 339 (454)
.....+ ....+-+++.+++.+.++.+.+|+++|.+... ...+...+ .+||++|+||.|.
T Consensus 164 ~~~~~~p~~~~~f~d~~~~~~~~v~~lk~~g~d~iI~l~H~G~~~------------d~~la~~~--~giDlIlgGHtH~ 229 (579)
T 3ztv_A 164 TVNSSSPGKDVKFYDEIATAQIMANALKQQGINKIILLSHAGSEK------------NIEIAQKV--NDIDVIVTGDSHY 229 (579)
T ss_dssp HHHHSCCCTTEEECCHHHHHHHHHHHHHTTTCCCEEEEEETCHHH------------HHHHHHHC--SSCCEEEECSSCC
T ss_pred cccccCCCCCceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCchh------------hHHHHHhC--CCCCEEEeCCCCc
Confidence 011100 22334455555555443567799999987421 11222211 3799999999998
Q ss_pred ce
Q 012895 340 YE 341 (454)
Q Consensus 340 y~ 341 (454)
..
T Consensus 230 ~~ 231 (579)
T 3ztv_A 230 LY 231 (579)
T ss_dssp EE
T ss_pred cc
Confidence 55
|
| >3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A* | Back alignment and structure |
|---|
Probab=98.58 E-value=3.1e-07 Score=94.75 Aligned_cols=186 Identities=16% Similarity=0.168 Sum_probs=95.0
Q ss_pred CCeEEEEEecCCCCCCh-------------------HHHHHHhhcCCCCeEee-cCccccCCCChhhHHHHhhhhhhhhc
Q 012895 146 FPIEFAIVGDLGQTEWT-------------------NSTLDHVGSKDYDVFLL-PGDLSYADFQQPLWDSFGRLVEPYAS 205 (454)
Q Consensus 146 ~~~~f~~igD~~~~~~~-------------------~~~l~~i~~~~pd~vl~-~GDl~y~~~~~~~~~~~~~~~~~l~~ 205 (454)
..++|++++|+|..... ...++++++.+++.+++ +||++..... ..+......++.+..
T Consensus 5 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~~~~~llldaGD~~~g~~~-~~~~~g~~~~~~ln~ 83 (509)
T 3ive_A 5 KDVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFTGPYI-SSLTKGKAIIDIMNT 83 (509)
T ss_dssp EEEEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHH-HHTTTTHHHHHHHTT
T ss_pred eEEEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhcCCCeEEEECCCCCCCchh-hhhcCChHHHHHHHh
Confidence 45899999999853210 23556666778887776 9999864211 111111122333333
Q ss_pred CCCeeecCCCcccCCCCCCCcchhhhhhhhccCCCCC-------CCCC--CCceEEEEeCe--EEEEEeccc-----CCC
Q 012895 206 SRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEE-------SGSS--SNLYYSFDIAG--AHIIMLGSY-----TDF 269 (454)
Q Consensus 206 ~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~-------~~~~--~~~~ys~~~g~--v~fi~Lds~-----~~~ 269 (454)
.-+-++++||||+.... ..+..+.+....|.-. .+.. ...|.-++.++ +-||++-+. ..+
T Consensus 84 lg~D~~tlGNHEfd~G~----~~l~~~l~~~~~p~l~aNv~~~~~~~p~~~~py~i~e~~G~kIgiiG~t~~~~~~~~~~ 159 (509)
T 3ive_A 84 MPFDAVTIGNHEFDHGW----DNTLLQLSQAKFPIVQGNIFYQNSSKSFWDKPYTIIEKDGVKIGVIGLHGVFAFNDTVS 159 (509)
T ss_dssp SCCSEECCCGGGGTTCH----HHHHHHHTTCSSCBCCCSEEETTSCCBSSSCSEEEEEETTEEEEEEEEECHHHHHHHSC
T ss_pred cCCcEEeecccccccCH----HHHHHHHhhCCCCEEEEEEEECCCCCccCcCCeEEEEECCEEEEEEecccCcccccccc
Confidence 34556789999985432 1223333322223211 0110 13355677887 555666321 000
Q ss_pred ---CC---CHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCC----CcHHHHHHHHHHHHh-cCCcEEEecccc
Q 012895 270 ---DE---DSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQG----EGESMRNSMEELLYN-ARVDVVFAGHVH 338 (454)
Q Consensus 270 ---~~---~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~----~~~~~~~~l~~ll~~-~~v~lvl~GH~H 338 (454)
.. .....+.+++.+++.+. +.+.+|+++|.+.-........ ...... ..+.++ .++|++|+||.|
T Consensus 160 ~~~~~g~~~~d~~~~~~~~v~~Lk~-~~D~iIvl~H~G~~~~~~~~~~~~~~~~~~~d---~~la~~~~giDlIlgGHtH 235 (509)
T 3ive_A 160 AATRVGIEARDEIKWLQRYIDELKG-KVDLTVALIHEGVPARQSSMGGTDVRRALDKD---IQTASQVKGLDILITGHAH 235 (509)
T ss_dssp GGGCTTEEECCHHHHHHHHHHHHTT-TCSEEEEEEECSSCCCCCCC---CCCCCCHHH---HHHHHHCSSCCEEEEESSC
T ss_pred cccCCCCEEcCHHHHHHHHHHHHHh-cCCEEEEEeccCcCCccccccccccccccchH---HHHHhcCCCCcEEEeCCcC
Confidence 00 12334555555555544 3677899999875321110000 001111 223333 369999999999
Q ss_pred cc
Q 012895 339 AY 340 (454)
Q Consensus 339 ~y 340 (454)
..
T Consensus 236 ~~ 237 (509)
T 3ive_A 236 VG 237 (509)
T ss_dssp CC
T ss_pred cc
Confidence 73
|
| >1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=98.56 E-value=4.4e-08 Score=89.72 Aligned_cols=68 Identities=24% Similarity=0.215 Sum_probs=45.8
Q ss_pred CCCeEEEEEecCCCCCC-hHHHHHHhhc-CCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccC
Q 012895 145 NFPIEFAIVGDLGQTEW-TNSTLDHVGS-KDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIE 219 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~-~~~~l~~i~~-~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~ 219 (454)
...+|++++||+|.... ..++++.+.. .++|.++++||+++.+.... +.++.+. ..+++++.||||..
T Consensus 10 ~~~~~i~visDiHg~~~~l~~~l~~~~~~~~~d~~i~~GD~~~~g~~~~------~~~~~l~-~~~~~~v~GNhd~~ 79 (221)
T 1g5b_A 10 SKYRNIWVVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVDRGAENV------ECLELIT-FPWFRAVRGNHEQM 79 (221)
T ss_dssp GGCSCEEEECCCTTCHHHHHHHHHHHTCCTTTCEEEECSCCSSSSSCHH------HHHGGGG-STTEEECCCHHHHH
T ss_pred CCCceEEEEEcCCCCHHHHHHHHHHccCCCCCCEEEEeCCccCCCCChH------HHHHHHh-cCCEEEEccCcHHH
Confidence 34579999999996432 2345555544 47899999999997654321 1222222 25899999999973
|
| >1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=98.30 E-value=1.2e-05 Score=74.54 Aligned_cols=180 Identities=20% Similarity=0.205 Sum_probs=94.1
Q ss_pred eEEEEEecCCCCCCh----HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCC
Q 012895 148 IEFAIVGDLGQTEWT----NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPI 223 (454)
Q Consensus 148 ~~f~~igD~~~~~~~----~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~ 223 (454)
+|++++||.=. ... ...++++++.. |++|..|+.+..+.... ....+.+..+. +-+ .+.||||++..
T Consensus 1 m~ilf~GDv~g-~~G~~~~~~~l~~lr~~~-d~vi~nge~~~~G~g~~--~~~~~~l~~~G--~Da-~TlGNHefD~~-- 71 (255)
T 1t70_A 1 MRVLFIGDVFG-QPGRRVLQNHLPTIRPQF-DFVIVNMENSAGGFGMH--RDAARGALEAG--AGC-LTLGNHAWHHK-- 71 (255)
T ss_dssp CEEEEECCBBH-HHHHHHHHHHHHHHGGGC-SEEEEECTBTTTTSSCC--HHHHHHHHHHT--CSE-EECCTTTTSST--
T ss_pred CEEEEEeccCC-hHHHHHHHHHHHHHHhhC-CEEEECCCCccCCcCCC--HHHHHHHHhCC--CCE-EEeccccccCc--
Confidence 58999999832 122 23556665555 99999888876543211 12223333332 344 47799999642
Q ss_pred CCcchhhhhhhhcc----CCCCC--CCCCCCceEEEEeCe--EEEEEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEE
Q 012895 224 ILPHAFKAYNARWL----MPYEE--SGSSSNLYYSFDIAG--AHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIF 295 (454)
Q Consensus 224 ~~~~~~~~~~~~~~----~p~~~--~~~~~~~~ys~~~g~--v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~I 295 (454)
....|.+... .|.|- .+.....|.-++.++ +-+|.|-+......-..-.+-+++.+++. +.+.+|
T Consensus 72 ----~l~~~l~~~~~~~~~~aN~~~~~~pg~g~~I~~~~G~kIgVigl~g~~~~~~~~~p~~~~~~~v~~l---~~d~II 144 (255)
T 1t70_A 72 ----DIYPMLSEDTYPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNPFRTMDALLERD---DLGTVF 144 (255)
T ss_dssp ----THHHHHHTTCSCEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCHHHHHHHHTTCS---SCCEEE
T ss_pred ----hHHHHHhhCCCcEEEEeccCCCCCCCCCeEEEEECCEEEEEEEeecCcCcccccCHHHHHHHHHHHh---CCCEEE
Confidence 1122221111 13221 122234566788887 44555544321111222233455555554 456789
Q ss_pred EEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCCcCCCCcEEEE
Q 012895 296 VLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYIT 360 (454)
Q Consensus 296 v~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~ 360 (454)
+.+|.- .....+.+.. .-.-+||+++.||+|....-..+. ++|+.|++
T Consensus 145 v~~H~e-----------~t~Ek~~la~-~~dg~vd~VvGgHTHv~~~d~~il-----~~gt~~i~ 192 (255)
T 1t70_A 145 VDFHAE-----------ATSEKEAMGW-HLAGRVAAVIGTHTHVPTADTRIL-----KGGTAYQT 192 (255)
T ss_dssp EEEECS-----------CHHHHHHHHH-HHTTSSSEEEEESSCSCBSCCEEE-----TTTEEEES
T ss_pred EEeCCC-----------ChHHHHHHHH-hCCCCeEEEEeCCCCcCCCceEEc-----CCCeEEEE
Confidence 999941 1112223332 223469999999999844322211 35777765
|
| >1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=98.28 E-value=1.1e-05 Score=75.80 Aligned_cols=185 Identities=18% Similarity=0.156 Sum_probs=96.9
Q ss_pred CCeEEEEEecCCCCCCh---HHHHHHhhcC-CCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCC
Q 012895 146 FPIEFAIVGDLGQTEWT---NSTLDHVGSK-DYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESI 221 (454)
Q Consensus 146 ~~~~f~~igD~~~~~~~---~~~l~~i~~~-~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~ 221 (454)
..+|++++||.+..... ...++++++. ++|+++..||.+..+... .....+.+..+. +- ..+.||||++..
T Consensus 3 ~~m~ilf~GDv~G~~G~~~l~~~l~~lr~~~~~d~vi~Ngen~~gG~g~--~~~~~~~ln~~G--~D-a~TlGNHefD~g 77 (281)
T 1t71_A 3 NSIKFIFLGDVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTHGKGL--SLKHYEFLKEAG--VN-YITMGNHTWFQK 77 (281)
T ss_dssp CCCEEEEECEEBHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTTTSSC--CHHHHHHHHHHT--CC-EEECCTTTTCCG
T ss_pred ceEEEEEECCcCChHHHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCc--CHHHHHHHHhcC--CC-EEEEccCcccCC
Confidence 35899999999743211 2234555433 689999999998755321 122233333332 33 357899999644
Q ss_pred CCCCcchhhhhhhh--c----cCCCCCCCC-CCCceEEEEeCe--EEEEEecccCCCC--CCHHHHHHHHHHHHhhccCC
Q 012895 222 PIILPHAFKAYNAR--W----LMPYEESGS-SSNLYYSFDIAG--AHIIMLGSYTDFD--EDSAQYKWLKADLAKINRKK 290 (454)
Q Consensus 222 ~~~~~~~~~~~~~~--~----~~p~~~~~~-~~~~~ys~~~g~--v~fi~Lds~~~~~--~~~~Q~~WL~~~L~~~~~~~ 290 (454)
.. ...|.+. . +.|...... ....|.-++.++ +-+|.|-+...+. ....-.+.+++.++ +++
T Consensus 78 ~~-----~~~~l~~~~~v~~aN~p~~~~~~~~g~g~~I~e~~G~kIgVIgl~g~~~f~~~~~~~pf~~a~~~v~---~~~ 149 (281)
T 1t71_A 78 LD-----LAVVINKKDLVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPFKTTNPFKVLKELIL---KRD 149 (281)
T ss_dssp GG-----HHHHTTCTTEECBSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSSCBCCHHHHHHHHHT---TCC
T ss_pred cc-----HHHHhhhcCEEeeccCCcccccccCCCCeEEEEECCEEEEEEEeeccccccCccccCHHHHHHHHHh---hcC
Confidence 11 1112111 1 122211000 234566788887 4455554432122 11222444555555 236
Q ss_pred CCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCCcCCCCcEEEE
Q 012895 291 TPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYIT 360 (454)
Q Consensus 291 ~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~ 360 (454)
.+.+|+..|.-. ....+.+... -..+||+|+.||+|....-..+ -++|+.|++
T Consensus 150 ~diIIv~~H~g~-----------t~Ek~~la~~-~dg~VD~VvGgHTHv~t~d~~i-----l~~gt~~i~ 202 (281)
T 1t71_A 150 CDLHIVDFHAET-----------TSEKNAFCMA-FDGYVTTIFGTHTHVPSADLRI-----TPKGSAYIT 202 (281)
T ss_dssp CSEEEEEEECSC-----------HHHHHHHHHH-HTTTSSEEEEESSSSCCTTCEE-----CTTSCEEES
T ss_pred CCEEEEEeCCCc-----------hHHHHHHHHh-CCCCeEEEEeCCCCcCCCceEE-----ecCCcEEEe
Confidence 778999999521 1122233321 2346999999999985432221 135788876
|
| >3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.28 E-value=8.4e-06 Score=79.39 Aligned_cols=186 Identities=13% Similarity=0.084 Sum_probs=89.9
Q ss_pred CCeEEEEEecCCCCCCh-----------------HHHHHHhhcCCCC-eEeecCccccCCCChhhHHHHh----------
Q 012895 146 FPIEFAIVGDLGQTEWT-----------------NSTLDHVGSKDYD-VFLLPGDLSYADFQQPLWDSFG---------- 197 (454)
Q Consensus 146 ~~~~f~~igD~~~~~~~-----------------~~~l~~i~~~~pd-~vl~~GDl~y~~~~~~~~~~~~---------- 197 (454)
..++|++.+|+|..-.. ...++++++..++ ++|.+||++..... ..|....
T Consensus 10 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~~~llld~GD~~qGs~~-~~~~~~~~~~~g~~~g~ 88 (341)
T 3gve_A 10 VHLSILATTDIHANMMDYDYYSDKETADFGLARTAQLIQKHREQNPNTLLVDNGDLIQGNPL-GEYAVKYQKDDIISGTK 88 (341)
T ss_dssp EEEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSSHH-HHHHHHHHHHHHHHTSS
T ss_pred eEEEEEEEeccCCCccCccccCCCccccCCHHHHHHHHHHHHhcCCCEEEEecCccCCCcHH-HHHhhhccccccccccc
Confidence 35899999999864211 2345666655665 56789999964321 1111110
Q ss_pred --hhhhhhhcCCCeeecCCCcccCCCCCCCcchhhhhhhhccCCCCC------CCCC-CCceEEEEe-----C----e--
Q 012895 198 --RLVEPYASSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEE------SGSS-SNLYYSFDI-----A----G-- 257 (454)
Q Consensus 198 --~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~------~~~~-~~~~ys~~~-----g----~-- 257 (454)
..++.+..--.=++++||||+..... .+..+.....+|.-. .+.. -..|.-++. + +
T Consensus 89 ~~~~~~~ln~lg~Da~tlGNHEfd~G~~----~L~~~~~~~~fp~l~aNv~~~~g~~~~~py~I~~~~~~~~~G~~~gvk 164 (341)
T 3gve_A 89 THPIISVMNALKYDAGTLGNHEFNYGLD----FLDGTIKGADFPIVNANVKTTSGENRYTPYVINEKTLIDENGNEQKVK 164 (341)
T ss_dssp CCHHHHHHHHTTCCBEECCGGGGTTCHH----HHHHHHHTCSSCEECSSEECTTSCBSSCCEEEEEEEEECTTSCEEEEE
T ss_pred ccHHHHHHHhhCCCeeeccchhhccCHH----HHHHHHHhcCCCEEEEeeECCCCCCccCCeEEEEEeeeccCCCcCCeE
Confidence 11222222223346799999964321 333333333333211 1111 122434454 2 4
Q ss_pred EEEEEecccCC--CC--------CCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhc
Q 012895 258 AHIIMLGSYTD--FD--------EDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNA 327 (454)
Q Consensus 258 v~fi~Lds~~~--~~--------~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~ 327 (454)
+-||++-+... +. ....-.+.+++.+++.+.++.+.+|+++|...-........+. ....|.+-+ .
T Consensus 165 IgviG~t~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~Lk~~g~D~II~l~H~G~~~d~~~~~~e~--~~~~lA~~v--~ 240 (341)
T 3gve_A 165 VGYIGFVPPQIMTWDKKNLEGQVQVQDIVESANETIPKMKAEGADVIIALAHTGIEKQAQSSGAEN--AVFDLATKT--K 240 (341)
T ss_dssp EEEEEECCTTHHHHTHHHHTTTCEECCHHHHHHHHHHHHHHTTCSEEEEEECCCCCSSCCCTTCSS--CHHHHHHHC--S
T ss_pred EEEEEeccCcccccccccccCceEEcCHHHHHHHHHHHHHhcCCCEEEEEeccCccccccccccch--hHHHHHhcC--C
Confidence 45566644210 00 0011223344444444333577899999987632211111111 111222222 4
Q ss_pred CCcEEEecccccc
Q 012895 328 RVDVVFAGHVHAY 340 (454)
Q Consensus 328 ~v~lvl~GH~H~y 340 (454)
++|++|.||.|..
T Consensus 241 giD~IigGHsH~~ 253 (341)
T 3gve_A 241 GIDAIISGHQHGL 253 (341)
T ss_dssp CCCEEEECSSCCE
T ss_pred CCcEEEECCCCcc
Confidence 7999999999985
|
| >2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A | Back alignment and structure |
|---|
Probab=98.28 E-value=1.9e-05 Score=72.88 Aligned_cols=181 Identities=16% Similarity=0.232 Sum_probs=95.3
Q ss_pred eEEEEEecCCCCCC---hHHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCCC
Q 012895 148 IEFAIVGDLGQTEW---TNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPII 224 (454)
Q Consensus 148 ~~f~~igD~~~~~~---~~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~ 224 (454)
+|++++||.=.... -...+.++++.. |++|..|..+..+.... ....+.+..+. +-++ +.||||++..
T Consensus 1 m~ilfiGDi~g~~G~~~v~~~l~~lr~~~-d~vi~ngen~~~G~g~~--~~~~~~l~~~G--~D~~-T~GNHefD~~--- 71 (252)
T 2z06_A 1 MRVLFIGDVMAEPGLRAVGLHLPDIRDRY-DLVIANGENAARGKGLD--RRSYRLLREAG--VDLV-SLGNHAWDHK--- 71 (252)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHGGGC-SEEEEECTTTTTTSSCC--HHHHHHHHHHT--CCEE-ECCTTTTSCT---
T ss_pred CEEEEEEecCCcccHHHHHHHHHHHHhhC-CEEEEeCCCccCCCCcC--HHHHHHHHhCC--CCEE-EeccEeeECc---
Confidence 58999999832211 134556666666 99888776665443211 22233333332 4454 7899999643
Q ss_pred Ccchhhhhhhhc--cCCCCC-CCCCCCceEEEEeCeEEEEEec--ccCCCCCCHHHHHHHHHHHHhhccCCCCeEEEEEc
Q 012895 225 LPHAFKAYNARW--LMPYEE-SGSSSNLYYSFDIAGAHIIMLG--SYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLH 299 (454)
Q Consensus 225 ~~~~~~~~~~~~--~~p~~~-~~~~~~~~ys~~~g~v~fi~Ld--s~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H 299 (454)
....|.+.. -.|.|- .+.+...|.-++.++.++-+++ ..........-.+-+++.+++.+ .+.+|+.+|
T Consensus 72 ---~l~~~l~~~~~vrpaN~~~~~pg~~~~i~~~~G~kIgVi~l~g~~~~~~~~~pf~~~~~~v~~lk---~d~IIv~~H 145 (252)
T 2z06_A 72 ---EVYALLESEPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRALDRLLEEEK---ADYVLVEVH 145 (252)
T ss_dssp ---THHHHHHHSSEECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHHHHHHHHHCC---CSEEEEEEE
T ss_pred ---hHHHHhccCCceEeecCCCCCCCCCeEEEEECCEEEEEEEcccccCccccCCHHHHHHHHHHHhC---CCEEEEEeC
Confidence 122222211 112221 1122356777888886655544 32211111222334555565553 567999999
Q ss_pred cccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCCcCCCCcEEEE
Q 012895 300 APWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYIT 360 (454)
Q Consensus 300 ~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~ 360 (454)
.-. ....+.+.. .-.-+||+|+.||+|....-..+ -++|+.|++
T Consensus 146 ~g~-----------tsek~~la~-~~dg~Vd~VvGgHTHv~t~d~~i-----l~~gt~~it 189 (252)
T 2z06_A 146 AEA-----------TSEKMALAH-YLDGRASAVLGTHTHVPTLDATR-----LPKGTLYQT 189 (252)
T ss_dssp CSC-----------HHHHHHHHH-HHBTTBSEEEEESSCSCBSCCEE-----CTTSCEEES
T ss_pred CCc-----------HHHHHHHHH-hCCCCeEEEEcCCCCcCCCccEE-----cCCCcEeec
Confidence 531 111222332 23346999999999984332222 246788876
|
| >3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=98.17 E-value=3.3e-05 Score=80.10 Aligned_cols=183 Identities=18% Similarity=0.155 Sum_probs=89.4
Q ss_pred CCCeEEEEEecCCCCCC--------------hHHHHHHhh----cCCCCe-EeecCccccCCCChhhHH--HHhhhhhhh
Q 012895 145 NFPIEFAIVGDLGQTEW--------------TNSTLDHVG----SKDYDV-FLLPGDLSYADFQQPLWD--SFGRLVEPY 203 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~--------------~~~~l~~i~----~~~pd~-vl~~GDl~y~~~~~~~~~--~~~~~~~~l 203 (454)
...++|++++|+|.... ...+...++ +.+++. +|.+||++....... +. .-...++.+
T Consensus 13 ~~~l~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~Gs~~~~-~~~~~g~~~~~~l 91 (557)
T 3c9f_A 13 WNDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSD-ITSPNGLKSTPIF 91 (557)
T ss_dssp CCSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHH-SSSSTTTTTHHHH
T ss_pred ceEEEEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCCccchh-hcccCCHHHHHHH
Confidence 56799999999987421 112222332 367884 789999996432111 00 001122222
Q ss_pred hcCCCeeecCCCcccCCCCCCCcchhhhhhhhccCCCCCC--------CC---CCCceEEEEe--Ce--EEEEEecccCC
Q 012895 204 ASSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEES--------GS---SSNLYYSFDI--AG--AHIIMLGSYTD 268 (454)
Q Consensus 204 ~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~--------~~---~~~~~ys~~~--g~--v~fi~Lds~~~ 268 (454)
..--.=++++||||+...... ...+....+....|.-.. +. ....|.-++. ++ +-||++.+...
T Consensus 92 n~lg~Da~tlGNHEfD~G~~~-l~~~~~~l~~a~fp~L~ANv~~~~~~g~~~~~~~py~I~e~~~~G~kIgiiGlt~~~~ 170 (557)
T 3c9f_A 92 IKQDYDLLTIGNHELYLWENS-KQEYETVVNHFQDKYVCSNVDIRLDNGLFVPLGLKYKYFTTPIRGIRVMAFGFLFDFK 170 (557)
T ss_dssp TTSCCSEECCCGGGSSSHHHH-HHHHHHHHHHTTTTBBCSSEEEECTTSCEEESSBSCEEEECTTTCCEEEEEECCCCCC
T ss_pred HhcCCCEEeecchhcccchHH-HHHHHHHHHhCCCCEEEeecccccccCCccccCCCeEEEEEccCCEEEEEEEeecCCC
Confidence 222234568999999542110 001211222223332211 10 1123556777 77 55566544211
Q ss_pred CC------CCHHH---HHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHh--cCCcE-EEecc
Q 012895 269 FD------EDSAQ---YKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYN--ARVDV-VFAGH 336 (454)
Q Consensus 269 ~~------~~~~Q---~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~--~~v~l-vl~GH 336 (454)
.. ....+ .+|+++.+ +++.+.+|+++|.+.-... .. . ......+.+ .++|+ +|.||
T Consensus 171 ~~~~~~~~~d~~e~i~~~~v~~l~----~~~~D~IIvL~H~G~~~~~------d~-~-~~~~~~lA~~~~giDilIlgGH 238 (557)
T 3c9f_A 171 RFNSGTRVTPMAETIHEPWFQEAL----KHEVDLIIIVGHTPISHNW------GE-F-YQVHQYLRQFFPDTIIQYFGGH 238 (557)
T ss_dssp CCCTTEEECCHHHHTTSHHHHHHT----TSCCSEEEEECSSCCCTTT------CH-H-HHHHHHHHHHCTTSEEEEEECS
T ss_pred CCCCCcEECCHHHHHHHHHHHHHH----hcCCCEEEEecccCccccC------cc-c-cHHHHHHHHhCCCCCEEEECCC
Confidence 00 01111 13555433 2256789999998852000 11 1 222232333 47994 99999
Q ss_pred cccce
Q 012895 337 VHAYE 341 (454)
Q Consensus 337 ~H~y~ 341 (454)
.|...
T Consensus 239 tH~~~ 243 (557)
T 3c9f_A 239 SHIRD 243 (557)
T ss_dssp SCCEE
T ss_pred CCCCC
Confidence 99863
|
| >3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=97.97 E-value=5.3e-05 Score=73.59 Aligned_cols=185 Identities=16% Similarity=0.108 Sum_probs=89.0
Q ss_pred CCeEEEEEecCCCCCCh-----------------HHHHHHhhcCCCC-eEeecCccccCCCChhhHHHHh--------hh
Q 012895 146 FPIEFAIVGDLGQTEWT-----------------NSTLDHVGSKDYD-VFLLPGDLSYADFQQPLWDSFG--------RL 199 (454)
Q Consensus 146 ~~~~f~~igD~~~~~~~-----------------~~~l~~i~~~~pd-~vl~~GDl~y~~~~~~~~~~~~--------~~ 199 (454)
-.++|++.+|+|..-.. ...++++++..++ ++|..||++..... ..|.... ..
T Consensus 7 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~n~llld~GD~~qGs~~-~~~~~~~~~~~g~~~p~ 85 (339)
T 3jyf_A 7 VDLRIMETTDLHSNMMDFDYYKDAATEKFGLVRTASLIEQARAEVKNSVLVDNGDVIQGSPL-GDYMAAKGLKEGDVHPV 85 (339)
T ss_dssp EEEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHTCSCEEEEECSCCSSSSHH-HHHHHHHCCCTTCCCHH
T ss_pred eeEEEEEEeeCCCCcccccccCCCccccCCHHHHHHHHHHHHhhCCCEEEEECCCCCCCchh-HHhhhhcccccccchHH
Confidence 35889999999864211 2355666666666 67889999964321 1111110 11
Q ss_pred hhhhhcCCCeeecCCCcccCCCCCCCcchhhhhhhhccCCCCC-------CCCC-CCceEEEEe-----C----e--EEE
Q 012895 200 VEPYASSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEE-------SGSS-SNLYYSFDI-----A----G--AHI 260 (454)
Q Consensus 200 ~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~-------~~~~-~~~~ys~~~-----g----~--v~f 260 (454)
++.+..--.=+.++||||+..... .+..+.+....|.-. .+.. -..|.-++. + + +-|
T Consensus 86 ~~~mn~lg~D~~t~GNHEfd~G~~----~l~~~~~~a~fp~l~aNv~~~~~g~~~~~py~I~~~~v~~~~G~~~gvkIgv 161 (339)
T 3jyf_A 86 YKAMNTLNYAVGNLGNHEFNYGLD----FLHKALAGAKFPYVNANIIDAKTGKPMFTPYLIQDTRVVDSDGQIHTLRIGY 161 (339)
T ss_dssp HHHHTTSCCSEEECCGGGGTTCHH----HHHHHHHTCSSCEECSSEEETTTSSBSSCCEEEEEEEEECTTSCEEEEEEEE
T ss_pred HHHHHhcCCCEEecchhhhhccHH----HHHHHHHhcCCceeeeeeeecCCCCcccCCeEEEEEEeeccCCCcCCeEEEE
Confidence 222222223356789999964321 233333332333211 1110 122434444 3 4 556
Q ss_pred EEecccCC--CC----CC----HHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHh-cCC
Q 012895 261 IMLGSYTD--FD----ED----SAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYN-ARV 329 (454)
Q Consensus 261 i~Lds~~~--~~----~~----~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~-~~v 329 (454)
|++-+..- +. .+ ..-.+-+++.+++.+.++.+.+|+++|...-........+.. . . ++.+ -++
T Consensus 162 iG~~~p~~~~~~~~~~~g~~~~~d~~e~~~~~v~~lr~~g~D~II~l~H~G~~~d~~~~~~en~--~-~---~~~~v~gI 235 (339)
T 3jyf_A 162 IGFVPPQIMTWDKANLNGKVTVNDITETARKYIPEMRAKGADVVVVVAHSGLSADPYQAMAENS--V-Y---YLSQVPGV 235 (339)
T ss_dssp EEECCTTHHHHTHHHHTTTEEECCHHHHHHHHHHHHHHTTCSEEEEEECCCCCCSCCCTTCSCC--H-H---HHTTSTTC
T ss_pred EecccCcccccccccccCCeEEcCHHHHHHHHHHHHHhcCCCEEEEEeccCccccccccccchh--H-H---HHhhCCCC
Confidence 66644210 00 00 111233344443333335778999999876221110001111 0 1 1222 479
Q ss_pred cEEEecccccce
Q 012895 330 DVVFAGHVHAYE 341 (454)
Q Consensus 330 ~lvl~GH~H~y~ 341 (454)
|++|.||.|...
T Consensus 236 D~IlgGHsH~~~ 247 (339)
T 3jyf_A 236 DAIMFGHAHAVF 247 (339)
T ss_dssp CEEEECSSCSEE
T ss_pred CEEEeCCCcccc
Confidence 999999999843
|
| >4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.85 E-value=0.00018 Score=74.35 Aligned_cols=172 Identities=15% Similarity=0.165 Sum_probs=85.2
Q ss_pred CeEEEEEecCCCCCC---------------------hHHHHHHhhcCCCC-eEeecCccccCCCChhh--HHHHhhhhhh
Q 012895 147 PIEFAIVGDLGQTEW---------------------TNSTLDHVGSKDYD-VFLLPGDLSYADFQQPL--WDSFGRLVEP 202 (454)
Q Consensus 147 ~~~f~~igD~~~~~~---------------------~~~~l~~i~~~~pd-~vl~~GDl~y~~~~~~~--~~~~~~~~~~ 202 (454)
.++|++++|+|..-. ....++++++.+++ ++|.+||++........ .....+.+..
T Consensus 3 ~LtILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~~~r~~~~n~llldaGD~~qGs~~~~~~~g~~~i~~mN~ 82 (530)
T 4h1s_A 3 ELTILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHFMNA 82 (530)
T ss_dssp EEEEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSSHHHHHHTTHHHHHHHHH
T ss_pred EEEEEEEcccccCCcccCcccccccccccccCcHHHHHHHHHHHHhhCcCeEEEEeCCcccchHHHHHhCChHHHHHHhc
Confidence 478999999985321 01345566666666 56779999975432111 1111122222
Q ss_pred hhcCCCeeecCCCcccCCCCCCCcchh-hhhhhhccCCCCCCC------------CCCCceEEEEeCeEE--EEEecccC
Q 012895 203 YASSRPWMVTEGNHEIESIPIILPHAF-KAYNARWLMPYEESG------------SSSNLYYSFDIAGAH--IIMLGSYT 267 (454)
Q Consensus 203 l~~~~P~~~v~GNHD~~~~~~~~~~~~-~~~~~~~~~p~~~~~------------~~~~~~ys~~~g~v~--fi~Lds~~ 267 (454)
+ -.=+.++||||+..... .+ ..+......|.-... ..-..|.-++.++++ ||++-+..
T Consensus 83 l---gyDa~~lGNHEFd~G~~----~l~~~~~~~a~fp~L~aNv~~~~~~~~~~~~~~~py~I~~~~g~kIgviGltt~~ 155 (530)
T 4h1s_A 83 L---RYDAMALGNHEFDNGVE----GLIEPLLKEAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVGYTSKE 155 (530)
T ss_dssp T---TCCEEECCGGGGTTTTH----HHHTTTTTTCSSCEECTTEEECTTHHHHHTTTSBSEEEEEETTEEEEEEEEECTT
T ss_pred c---CCCEEEEchhhhccCHH----HHHHHHHhhCCCCEEEEeeeccCCcccccCCcccceEEEEeccEEEeeccccccc
Confidence 2 23356899999964322 11 112222222221110 001235667888754 55554321
Q ss_pred -----CCCCC---HHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhc-CCcEEEecccc
Q 012895 268 -----DFDED---SAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNA-RVDVVFAGHVH 338 (454)
Q Consensus 268 -----~~~~~---~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~-~v~lvl~GH~H 338 (454)
....+ ....+-+++.+++.+.++.+.+|++.|...- .... +.++. ++|+++.||.|
T Consensus 156 ~~~~~~~~~~~~f~d~v~~~~~~v~~Lr~~g~D~II~LsH~G~~------------~d~~---la~~v~giD~IlgGHsH 220 (530)
T 4h1s_A 156 TPFLSNPGTNLVFEDEITALQPEVDKLKTLNVNKIIALGHSGFE------------MDKL---IAQKVRGVDVVVGGHSN 220 (530)
T ss_dssp HHHHSCCCTTEEECCHHHHHHHHHHHHHHTTCCCEEEEEESCHH------------HHHH---HHHHSTTCCEEECCSSC
T ss_pred eeeeccCCCCcccCcHHHHHHHHHhhhhhcCCCEEEEeccCCch------------HHHH---HHhcCCCCCeeccCCcc
Confidence 00000 1122223333333222356779999997531 1112 23333 79999999999
Q ss_pred cc
Q 012895 339 AY 340 (454)
Q Consensus 339 ~y 340 (454)
..
T Consensus 221 ~~ 222 (530)
T 4h1s_A 221 TF 222 (530)
T ss_dssp CC
T ss_pred ce
Confidence 74
|
| >2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=97.48 E-value=5.3e-05 Score=70.98 Aligned_cols=64 Identities=25% Similarity=0.208 Sum_probs=43.0
Q ss_pred eEEEEEecCCCCCC-hHHHHHHhhcCCC-CeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCccc
Q 012895 148 IEFAIVGDLGQTEW-TNSTLDHVGSKDY-DVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEI 218 (454)
Q Consensus 148 ~~f~~igD~~~~~~-~~~~l~~i~~~~p-d~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 218 (454)
.|++++||+|.... ..++++.+....+ |.+|++||+++.+.... + ..+.+.. .+++++.||||.
T Consensus 19 ~~i~visDiHg~~~~l~~~l~~~~~~~~~d~ii~~GD~vd~g~~~~--~-~l~~l~~----~~~~~v~GNHd~ 84 (262)
T 2qjc_A 19 GRVIIVGDIHGCRAQLEDLLRAVSFKQGSDTLVAVGDLVNKGPDSF--G-VVRLLKR----LGAYSVLGNHDA 84 (262)
T ss_dssp SCEEEECCCTTCHHHHHHHHHHHTCCTTTSEEEECSCCSSSSSCHH--H-HHHHHHH----HTCEECCCHHHH
T ss_pred CeEEEEeCCCCCHHHHHHHHHHHhccCCCCEEEEecCCCCCCCCHH--H-HHHHHHH----CCCEEEeCcChH
Confidence 48999999995421 2345555555555 99999999998654322 1 2222222 479999999998
|
| >2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00012 Score=69.13 Aligned_cols=67 Identities=21% Similarity=0.213 Sum_probs=44.3
Q ss_pred eEEEEEecCCCCCC-hHHHHHHhhc-CCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccC
Q 012895 148 IEFAIVGDLGQTEW-TNSTLDHVGS-KDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIE 219 (454)
Q Consensus 148 ~~f~~igD~~~~~~-~~~~l~~i~~-~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~ 219 (454)
++++++||+|.... ...+++.+.. .++|.++++||+++.+.... ...+.+..+. .+++.+.||||..
T Consensus 1 M~i~vigDiHG~~~~l~~ll~~~~~~~~~d~~v~lGD~vdrG~~s~---~~l~~l~~l~--~~~~~v~GNHe~~ 69 (280)
T 2dfj_A 1 MATYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVARGPGSL---DVLRYVKSLG--DSVRLVLGNHDLH 69 (280)
T ss_dssp -CEEEECCCCSCHHHHHHHHHHTTCCTTTCEEEECSCCSSSSSCHH---HHHHHHHHTG--GGEEECCCHHHHH
T ss_pred CeEEEEecCCCCHHHHHHHHHHhCCCCCCCEEEEeCCcCCCCCccH---HHHHHHHhCC--CceEEEECCCcHH
Confidence 47899999996532 2344555544 57899999999998665422 1223333332 3799999999973
|
| >2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.20 E-value=0.0024 Score=52.12 Aligned_cols=82 Identities=16% Similarity=0.090 Sum_probs=55.2
Q ss_pred CCCCCeeEEEEecCCCcEEEEEEeCCCCC--------ccEEEEeecCCCC--ceEEEeEeEEEeeeeeecCeEEEEEECC
Q 012895 50 SESDPQQVHISLAAKDYIRVSWITDDKEA--------ESVVEYGKLPGRY--NTVATGEHTSYQFFFYKSGKIHHVKIGP 119 (454)
Q Consensus 50 ~~~~p~~v~l~~~~~~~~~v~W~t~~~~~--------~~~v~y~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~g 119 (454)
....|..+++.....+++.|+|.....+. .-.|+|....... ...... ....++|+|
T Consensus 18 pp~~P~~l~~~~~s~tsi~lsW~~p~~~~~~i~~~~~~Y~v~y~~~~~~~~~~~~~~~-------------~~~~~~v~g 84 (123)
T 2edd_A 18 PMLPPVGVQAVALTHDAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSASAKYKSEDT-------------TSLSYTATG 84 (123)
T ss_dssp SSCCCEEEEEEEEETTEEEEEEECSSSCSSCCCSCCCCEEEEEEETTCTTCCCCCEEE-------------SSSEEEEES
T ss_pred CCCCCcceEEEEcCCCeEEEEecCCCCCcccccCcCceEEEEEEECCCCCccEEEEeC-------------CceEEEecC
Confidence 45678889988888999999999654222 4467787653211 111110 133578999
Q ss_pred CCCCCEEEEEeCc--------cCceeEEECCCC
Q 012895 120 LEPATTYYYRCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 120 L~p~t~Y~Yrv~~--------~s~~~~F~T~p~ 144 (454)
|+|+|.|.++|.. .+....|+|.+.
T Consensus 85 L~P~T~Y~f~V~A~n~~g~g~~S~~v~~~T~~~ 117 (123)
T 2edd_A 85 LKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEA 117 (123)
T ss_dssp CCTTCEEEEEEEECCSSSCCCCCCCEEEECCCS
T ss_pred CCCCCEEEEEEEEeCCCcccCCCCCEEEEccCC
Confidence 9999999999853 356778888764
|
| >2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.20 E-value=0.0031 Score=50.12 Aligned_cols=85 Identities=18% Similarity=0.200 Sum_probs=55.1
Q ss_pred CCCCCeeEEEEec--CCCcEEEEEEeCCCCC----ccEEEEeecCCCC--ceEEEeEeEEEeeeeeecCeEEEEEECCCC
Q 012895 50 SESDPQQVHISLA--AKDYIRVSWITDDKEA----ESVVEYGKLPGRY--NTVATGEHTSYQFFFYKSGKIHHVKIGPLE 121 (454)
Q Consensus 50 ~~~~p~~v~l~~~--~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~ 121 (454)
....|..+.+... ..+++.|.|....... .-.|+|....... ...... ...-...+.|++|+
T Consensus 8 P~~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~----------~~~~~~~~~i~~L~ 77 (114)
T 2ede_A 8 PTSAPKDLTVITREGKPRAVIVSWQPPLEANGKITAYILFYTLDKNIPIDDWIMET----------ISGDRLTHQIMDLN 77 (114)
T ss_dssp CCSCCEEEEEEECSSCSSCEEEEEECCSSCSSCCSEEEEEEESCSSSCTTTSEEEE----------EETTCCEEEECSCC
T ss_pred CCCCCcceEEEEccCCCCEEEEEECCCCCCCCceeEEEEEEEeCCCCCccceEEEE----------ECCCceEEEEcCCC
Confidence 3457888888877 5789999999875322 3466776543211 111110 11223457889999
Q ss_pred CCCEEEEEeCc--------cCceeEEECCCC
Q 012895 122 PATTYYYRCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 122 p~t~Y~Yrv~~--------~s~~~~F~T~p~ 144 (454)
|++.|.+||.. .+....|+|++.
T Consensus 78 p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 108 (114)
T 2ede_A 78 LDTMYYFRIQARNSKGVGPLSDPILFRTLKV 108 (114)
T ss_dssp SSCEEEEEEEEECSSCBCCCCCCEEEECCCS
T ss_pred CCCEEEEEEEEEeCCcCcCCcccEEEEecCC
Confidence 99999999953 356778888764
|
| >2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00076 Score=52.64 Aligned_cols=80 Identities=15% Similarity=0.247 Sum_probs=50.2
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCC--CC----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCC
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDD--KE----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPAT 124 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~--~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 124 (454)
...|..+++.....+++.|.|.... .. ..-.|+|............+ -...+.|++|+|++
T Consensus 9 p~~P~~l~~~~~~~~si~l~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~~~~~~-------------~~~~~~i~~L~p~t 75 (103)
T 2edy_A 9 SGFPQNLHVTGLTTSTTELAWDPPVLAERNGRIISYTVVFRDINSQQELQNIT-------------TDTRFTLTGLKPDT 75 (103)
T ss_dssp SCCCEEEECSSBCSSCEECEEECCCTTSCSSCCCEEEEEEEETTSCCEEEEEE-------------SSSCCEECSCCTTC
T ss_pred CCCCeeeEEEecCCCEEEEEECCCCCcCCCCcEeEEEEEEEECCCCccEEEcC-------------CcceEEEcCCCCCC
Confidence 3467777776666889999999872 11 23456676554422111111 12235789999999
Q ss_pred EEEEEeCc--------cCceeEEECCC
Q 012895 125 TYYYRCGG--------RGPEFSFKMPP 143 (454)
Q Consensus 125 ~Y~Yrv~~--------~s~~~~F~T~p 143 (454)
.|.+||.. .+....|+|.|
T Consensus 76 ~Y~~~V~A~n~~G~g~~S~~~~~~T~p 102 (103)
T 2edy_A 76 TYDIKVRAWTSKGSGPLSPSIQSRTMP 102 (103)
T ss_dssp CEEEECCEECSSCBCCCCCCCCCCCCC
T ss_pred EEEEEEEEECCCCCCCCCCCEEEEecc
Confidence 99999964 24556677765
|
| >2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C* | Back alignment and structure |
|---|
Probab=97.06 E-value=0.00052 Score=65.58 Aligned_cols=70 Identities=16% Similarity=0.149 Sum_probs=45.8
Q ss_pred CeEEEEEecCCCCCCh-HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcC--CCeeecCCCcccC
Q 012895 147 PIEFAIVGDLGQTEWT-NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASS--RPWMVTEGNHEIE 219 (454)
Q Consensus 147 ~~~f~~igD~~~~~~~-~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~--~P~~~v~GNHD~~ 219 (454)
..++.++||+|..... .++++.+.....+.++++||+++.+....+ ....+..+... ..++.+.||||..
T Consensus 49 ~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vflGD~VDRG~~s~e---vl~lL~~lk~~~p~~v~~lrGNHE~~ 121 (309)
T 2ie4_C 49 RCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVE---TVTLLVALKVRYRERITILRGNHESR 121 (309)
T ss_dssp CSSEEEECCCTTCHHHHHHHHHHHCCTTTSCEEECSCCSSSSTTHHH---HHHHHHHHHHHCTTTEEECCCTTSST
T ss_pred cCCEEEEecCCCCHHHHHHHHHHcCCCCCCEEEEeCCccCCCCChHH---HHHHHHHHHhhCCCcEEEEeCCCCHH
Confidence 3569999999965322 344555555567889999999987654322 22333333222 3499999999985
|
| >2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A | Back alignment and structure |
|---|
Probab=97.05 E-value=0.00049 Score=66.91 Aligned_cols=72 Identities=13% Similarity=-0.038 Sum_probs=45.8
Q ss_pred CCCeEEEEEecCCCCCCh-HHHHHHhhc--------CCCCeEeecCccccCCCChhhHHHHhhhhhhhh-----cCCCee
Q 012895 145 NFPIEFAIVGDLGQTEWT-NSTLDHVGS--------KDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYA-----SSRPWM 210 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~~-~~~l~~i~~--------~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~-----~~~P~~ 210 (454)
....+++++||+|..... ..+++.+.. .++|.++++||+++.+....+ ....+..+. ...+++
T Consensus 68 ~~~~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~s~e---vl~~l~~l~~~~~~~~~~v~ 144 (342)
T 2z72_A 68 LGIKKVVALSDVHGQYDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNE---VLWFMYQLDQQARDAGGMVH 144 (342)
T ss_dssp CCCCEEEEECCCTTCHHHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSCHHH---HHHHHHHHHHHHHHTTCEEE
T ss_pred cCCCCEEEEECCCCCHHHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCCCHHH---HHHHHHHHHHHHhhCCCeEE
Confidence 456899999999965322 233443321 157999999999986654321 222333332 224699
Q ss_pred ecCCCcccC
Q 012895 211 VTEGNHEIE 219 (454)
Q Consensus 211 ~v~GNHD~~ 219 (454)
.+.||||..
T Consensus 145 ~v~GNHE~~ 153 (342)
T 2z72_A 145 LLMGNHEQM 153 (342)
T ss_dssp ECCCHHHHH
T ss_pred EEecCCcHH
Confidence 999999984
|
| >2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0048 Score=48.44 Aligned_cols=82 Identities=17% Similarity=0.153 Sum_probs=51.0
Q ss_pred CeeEEEEecCCCcEEEEEEeCCCC-----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 54 PQQVHISLAAKDYIRVSWITDDKE-----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 54 p~~v~l~~~~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
|..+.+.....+ +.|+|..+... ..-.|+|.......+...... .. ..+-...+.|++|+|+|.|.+
T Consensus 10 P~~~~~~~~~~~-v~l~W~~P~~~~G~pi~~Y~v~~~~~~~~~~~~~~~~---~~----~~~~~~~~~i~~L~p~t~Y~~ 81 (105)
T 2haz_A 10 PSIDQVEPYSST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYD---AK----EASMEGIVTIVGLKPETTYAV 81 (105)
T ss_dssp CEEEEEEECSSC-EEEEEECCSCCTTSCCCEEEEEEEETTCCCCEEEEEE---HH----HHHHHSEEEECSCCTTCEEEE
T ss_pred CCCCEEEEcCCc-EEEEEcCCcccCCccccEEEEEEEECCCCCCccceEE---cc----ccCCccEEEECCCCCCCEEEE
Confidence 777777766666 99999987432 123577766543322111000 00 111234567999999999999
Q ss_pred EeCc--------cCceeEEECCC
Q 012895 129 RCGG--------RGPEFSFKMPP 143 (454)
Q Consensus 129 rv~~--------~s~~~~F~T~p 143 (454)
||.. .+....|+|.|
T Consensus 82 rV~A~n~~G~g~~S~~~~~~T~p 104 (105)
T 2haz_A 82 RLAALNGKGLGEISAASEFKTQP 104 (105)
T ss_dssp EEEEEETTEECCCCCCEEEECCC
T ss_pred EEEEEcCCccCCCcCCEeeEEec
Confidence 9963 35677899877
|
| >1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0072 Score=48.39 Aligned_cols=83 Identities=25% Similarity=0.335 Sum_probs=54.8
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCC-CC----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDD-KE----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~-~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 126 (454)
..|..+++.....+++.|.|.... .. ..-.|+|.......+.... ....-...+.|++|+|+|.|
T Consensus 19 ~~P~~l~~~~~~~~sv~l~W~~p~~~~~g~i~~Y~v~~~~~~~~~~~~~~----------~~~~~~~~~~i~~L~p~t~Y 88 (120)
T 1x5f_A 19 SAPRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVEN----------TSHPGEMQVTIQNLMPATVY 88 (120)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCEEEE----------CSSTTCSEEEECSCCTTCEE
T ss_pred CCCCCcEEEecCCCEEEEEECCCCCCCCCcEEEEEEEEEECCCCCceEEE----------eccCCccEEEeCCCCCCCEE
Confidence 467888888777899999998874 22 2346777665432221110 01122445789999999999
Q ss_pred EEEeCc--------cCceeEEECCCC
Q 012895 127 YYRCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 127 ~Yrv~~--------~s~~~~F~T~p~ 144 (454)
.+||.. .+....|+|.+.
T Consensus 89 ~~~V~A~n~~G~g~~S~~~~~~T~~~ 114 (120)
T 1x5f_A 89 IFRVMAQNKHGSGESSAPLRVETQPE 114 (120)
T ss_dssp EEEEEEECSSCEEEECCCEEEECCCC
T ss_pred EEEEEEECCCccCCCCCCEEEEeCCC
Confidence 999963 256677888654
|
| >1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0023 Score=51.37 Aligned_cols=83 Identities=14% Similarity=0.105 Sum_probs=53.0
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCCCC--------ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCC
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDKEA--------ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEP 122 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~~~--------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p 122 (454)
...|..|++.....+++.|+|.-..... .-.|+|.......... .. ...-...++|+||+|
T Consensus 9 p~~P~~l~~~~~s~tsi~lsW~~p~~~~~~~~~~~~~Y~v~y~~~~~~~~~~--------~~---~~~~~~~~~i~gL~P 77 (113)
T 1x5j_A 9 MMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKY--------KN---ANATTLSYLVTGLKP 77 (113)
T ss_dssp CCCCEEEEEEEEETTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSSCCC--------EE---CCBCSSEEEEESCCT
T ss_pred CCCCcceEEEEecCCEEEEEecCCCCccccccCcCceEEEEEEECCCCCeEE--------EE---EecCcCEEEeCCCCC
Confidence 4578889988888999999998764321 3456676531111100 00 111233578999999
Q ss_pred CCEEEEEeCc--------cCceeEEECCCC
Q 012895 123 ATTYYYRCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 123 ~t~Y~Yrv~~--------~s~~~~F~T~p~ 144 (454)
+|.|.++|.. .+....++|.+.
T Consensus 78 ~T~Y~f~V~A~~~~G~g~~S~~v~~~T~~~ 107 (113)
T 1x5j_A 78 NTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 107 (113)
T ss_dssp TCEECCEEEEECSSCBCCCCCCCCEECCCS
T ss_pred CcEEEEEEEEecCCccCCCcccEEeeccCC
Confidence 9999999863 345667777653
|
| >1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0054 Score=48.89 Aligned_cols=83 Identities=12% Similarity=0.083 Sum_probs=53.2
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCC------CCccEEEEeecCCC---CceEEEeEeEEEeeeeeecCeEEEEEECCCC
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDK------EAESVVEYGKLPGR---YNTVATGEHTSYQFFFYKSGKIHHVKIGPLE 121 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~------~~~~~v~y~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~ 121 (454)
...|..+.+.....+++.|.|..... ...-.|+|...... ...... ..+-...++|++|+
T Consensus 9 ~~~P~~~~~~~~~~~si~l~W~~p~~~~~~g~i~gY~v~y~~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L~ 77 (114)
T 1x4y_A 9 VAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDM-----------VEGDRYWHSISHLQ 77 (114)
T ss_dssp CSCCEEEEEECSSSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCCEE-----------EETTCCEEEECSCC
T ss_pred CCCCeEEEEEecCCCEEEEEEeCCCchhcCCccceEEEEEEECCCCCCcceeeEe-----------cCCcEeEEEcCCCC
Confidence 35677788877778999999998741 12246667554332 111000 01112357899999
Q ss_pred CCCEEEEEeCc--------cCceeEEECCCC
Q 012895 122 PATTYYYRCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 122 p~t~Y~Yrv~~--------~s~~~~F~T~p~ 144 (454)
|+|.|.+||.. .+....|+|++.
T Consensus 78 p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~~~ 108 (114)
T 1x4y_A 78 PETSYDIKMQCFNEGGESEFSNVMICETKAR 108 (114)
T ss_dssp TTCEEEEEEEEECTTCCCCCCCCEEEECCCC
T ss_pred CCCEEEEEEEEEcCCccCCCcCCEEEEeCCC
Confidence 99999999953 356778888764
|
| >2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0034 Score=49.44 Aligned_cols=81 Identities=14% Similarity=0.201 Sum_probs=51.4
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCCC----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKEA----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
.|..+++.....+++.|.|.-+.... .-.|+|............. ..-...+.|++|+|++.|.+
T Consensus 10 ~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~-----------~~~~~~~~l~~L~p~t~Y~~ 78 (108)
T 2djs_A 10 TVPIMHQVSATMRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSMA-----------RSQTNTARIDGLRPGMVYVV 78 (108)
T ss_dssp CCSCCEEEEECSSEEEEECCCCSCCSSCEEEEEEEEEETTSCSTTCEEE-----------EESSSEEEEESCCTTCEEEE
T ss_pred CCcceEEEecCCCEEEEEECCCCCCCCeEEEEEEEEEECCCCCcceeEE-----------ecCccEEEEcCCCCCCEEEE
Confidence 45566677667889999998875432 2345565544321111100 01123467899999999999
Q ss_pred EeCc--------cCceeEEECCCC
Q 012895 129 RCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 129 rv~~--------~s~~~~F~T~p~ 144 (454)
||.. .+....|+|+++
T Consensus 79 ~V~A~n~~G~g~~S~~~~~~T~~~ 102 (108)
T 2djs_A 79 QVRARTVAGYGKFSGKMCFQTLTD 102 (108)
T ss_dssp EEEEEESSCEEEECCCEEEECCCS
T ss_pred EEEEEeCCEECCCCCCEEEEeCCC
Confidence 9963 356778999875
|
| >1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=96.92 E-value=0.00082 Score=64.70 Aligned_cols=69 Identities=20% Similarity=0.221 Sum_probs=45.0
Q ss_pred eEEEEEecCCCCCCh-HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhc--CCCeeecCCCcccC
Q 012895 148 IEFAIVGDLGQTEWT-NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYAS--SRPWMVTEGNHEIE 219 (454)
Q Consensus 148 ~~f~~igD~~~~~~~-~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~--~~P~~~v~GNHD~~ 219 (454)
.++.++||+|..... ..+++.+.....+-+|++||+++.+....+ ...++..+.. .-.++.+.||||..
T Consensus 57 ~~i~viGDIHG~~~~L~~ll~~~g~~~~~~~vflGD~VDRG~~s~e---vl~lL~~lk~~~p~~v~~lrGNHE~~ 128 (330)
T 1fjm_A 57 APLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLE---TICLLLAYKIKYPENFFLLRGNHECA 128 (330)
T ss_dssp SSEEEECBCTTCHHHHHHHHHHHCSTTSSCEEECSCCSSSSSCHHH---HHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred CceEEecCCCCCHHHHHHHHHHhCCCCcceEEeCCCcCCCCCChHH---HHHHHHHhhhhcCCceEEecCCchHh
Confidence 468999999976422 345555555567889999999987654321 2233333321 23589999999974
|
| >1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0026 Score=50.11 Aligned_cols=79 Identities=23% Similarity=0.350 Sum_probs=49.2
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCCC----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKEA----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
.|..+.+.....+++.|.|......+ .-.|+|............+ ....+.|++|+|+|.|.|
T Consensus 10 ~P~~~~~~~~s~~sv~l~W~~p~~~g~~i~~Y~v~~~~~~~~~~~~~~~-------------~~~~~~v~~L~p~t~Y~f 76 (106)
T 1x4x_A 10 QCKPPQVTCRSATCAQVNWEVPLSNGTDVTEYRLEWGGVEGSMQICYCG-------------PGLSYEIKGLSPATTYYC 76 (106)
T ss_dssp CCCCCCCEEEETTEEEEECCCCSCSSSCCCEEEEEEESSTTSCCEEEEE-------------SCSEEEEESCCSSCEEEE
T ss_pred CCCCCEEEEcCCCEEEEEEcCCCCCCCcceEEEEEEEcCCCceEEEEeC-------------CcceEEEcCCCCCCEEEE
Confidence 34445566556889999998775322 2356666543222111111 112467899999999999
Q ss_pred EeCc--------cCceeEEECCCC
Q 012895 129 RCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 129 rv~~--------~s~~~~F~T~p~ 144 (454)
||.. .+....|+|++.
T Consensus 77 rV~A~n~~G~g~~S~~v~~~T~~~ 100 (106)
T 1x4x_A 77 RVQALSVVGAGPFSEVVACVTPPS 100 (106)
T ss_dssp EEEEECSSCCCCBCCCEEEECCCC
T ss_pred EEEEEcCCcCCCCcCCEEEECCCC
Confidence 9863 356778888764
|
| >2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0082 Score=46.94 Aligned_cols=78 Identities=9% Similarity=0.028 Sum_probs=51.7
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCC----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKE----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
.|..+++.....+++.|.|...... ..-.|+|............ .. ...+.|++|+|+|.|.+
T Consensus 10 ~P~~l~~~~~~~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~-----------~~--~~~~~i~~L~p~t~Y~~ 76 (106)
T 2ed8_A 10 PVENLQAVSTSPTSILITWEPPAYANGPVQGYRLFCTEVSTGKEQNIE-----------VD--GLSYKLEGLKKFTEYSL 76 (106)
T ss_dssp CCEEEEEECSSTTEEEEEEECCSSCSSCCCEEEEEEEETTTCCEEEEE-----------EC--SSCEEEESCCTTCEEEE
T ss_pred CCceeEEEecCCCEEEEEECCCCCCCCCeeEEEEEEEECCCCceEEEe-----------CC--ccEEEECCCCCCCEEEE
Confidence 6788888877789999999977422 2346667655433221111 11 23467899999999999
Q ss_pred EeCc--------cCceeEEECCC
Q 012895 129 RCGG--------RGPEFSFKMPP 143 (454)
Q Consensus 129 rv~~--------~s~~~~F~T~p 143 (454)
||.. .+....|+|.+
T Consensus 77 ~V~A~n~~G~g~~S~~~~~~T~~ 99 (106)
T 2ed8_A 77 RFLAYNRYGPGVSTDDITVVTLS 99 (106)
T ss_dssp EEEEECSSCEEEECCCEEEECCC
T ss_pred EEEEEeCCccCCCcCCEEEEcCC
Confidence 9963 24567788854
|
| >2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.87 E-value=0.011 Score=46.40 Aligned_cols=79 Identities=19% Similarity=0.228 Sum_probs=51.2
Q ss_pred CCCeeEEEEec--CCCcEEEEEEeCCCCCc----cEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCE
Q 012895 52 SDPQQVHISLA--AKDYIRVSWITDDKEAE----SVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATT 125 (454)
Q Consensus 52 ~~p~~v~l~~~--~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 125 (454)
..|..+.+... ..+++.|.|.-...... -.|+|.......+.... .. ...+.|++|+|+|.
T Consensus 9 ~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~-----------~~--~~~~~l~~L~p~t~ 75 (108)
T 2dm4_A 9 DAPRNLQLSLPREAEGVIVGHWAPPIHTHGLIREYIVEYSRSGSKMWASQR-----------AA--SNFTEIKNLLVNTL 75 (108)
T ss_dssp TSCEEEEEECCTTCSSCEEEEEECCSCCSSCEEEEEEEEEETTCSCCEEEE-----------ES--SSEEEECSCCSSCE
T ss_pred cCCcCeEEEEeccCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCeEEec-----------CC--ccEEEeCCCCCCCE
Confidence 36778877763 47899999998753222 35556655432222211 11 12578999999999
Q ss_pred EEEEeCc--------cCceeEEECCC
Q 012895 126 YYYRCGG--------RGPEFSFKMPP 143 (454)
Q Consensus 126 Y~Yrv~~--------~s~~~~F~T~p 143 (454)
|.+||.. .+....|+|.+
T Consensus 76 Y~~~V~A~n~~G~g~~S~~~~~~T~~ 101 (108)
T 2dm4_A 76 YTVRVAAVTSRGIGNWSDSKSITTIK 101 (108)
T ss_dssp EEEEEEEEESSCEEEECCCEEEECCS
T ss_pred EEEEEEEECCCceeCCCCCEEEECCC
Confidence 9999963 35667788854
|
| >1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0063 Score=47.97 Aligned_cols=81 Identities=11% Similarity=0.197 Sum_probs=50.6
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCC----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKE----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
.|..+++.....+++.|.|...... ..-.|+|............. ..-...+.|++|+|++.|.+
T Consensus 13 ~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~-----------~~~~~~~~i~~L~p~t~Y~~ 81 (111)
T 1x5l_A 13 QVVVIRQERAGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQSYSTL-----------KAVTTRATVSGLKPGTRYVF 81 (111)
T ss_dssp CCCCEECSCBCSSCEEEEECCCSCCCSCCCEEEEEEEESSSCCSSCEEE-----------EESSSEEEECSCCTTCEEEE
T ss_pred CCceEEEEEcCCCEEEEEECCCCCCCCEEEEEEEEEEECCCCceeEEEe-----------cCCCCEEEEcCCCCCCEEEE
Confidence 3555555555588999999876432 23456676554211111100 01123567899999999999
Q ss_pred EeCc--------cCceeEEECCCC
Q 012895 129 RCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 129 rv~~--------~s~~~~F~T~p~ 144 (454)
||.. .+....|+|++.
T Consensus 82 ~V~A~n~~G~g~~S~~~~~~T~~~ 105 (111)
T 1x5l_A 82 QVRARTSAGCGRFSQAMEVETGKP 105 (111)
T ss_dssp CEEEEETTEECCCCCCEEEECCCT
T ss_pred EEEEEeCCcCCCCcccEEEEcCCC
Confidence 9963 357788999875
|
| >3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0021 Score=61.79 Aligned_cols=72 Identities=15% Similarity=0.214 Sum_probs=45.6
Q ss_pred CCCeEEEEEecCCCCCCh-HHHHHHhhcCCC-CeEeecCccccCCCChhhHHHHhhhhhhhhc--CCCeeecCCCcccC
Q 012895 145 NFPIEFAIVGDLGQTEWT-NSTLDHVGSKDY-DVFLLPGDLSYADFQQPLWDSFGRLVEPYAS--SRPWMVTEGNHEIE 219 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~~-~~~l~~i~~~~p-d~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~--~~P~~~v~GNHD~~ 219 (454)
....|++++||+|..... .++++.+..... +.+|++||+++.+....+ ....+..+.. ...++.+.||||..
T Consensus 61 ~~~~ri~viGDIHG~~~~L~~ll~~~g~~~~~~~~vflGD~VDRG~~s~e---vl~lL~~lk~~~p~~v~llrGNHE~~ 136 (335)
T 3icf_A 61 TPDVKISVCGDTHGQFYDVLNLFRKFGKVGPKHTYLFNGDFVDRGSWSCE---VALLFYCLKILHPNNFFLNRGNHESD 136 (335)
T ss_dssp STTCEEEEECCCTTCHHHHHHHHHHHCCCBTTEEEEECSCCSSSSTTHHH---HHHHHHHHHHHCTTTEEECCCTTSSH
T ss_pred ccCceEEEEecCCCCHHHHHHHHHHcCCCCCCcEEEEeCCccCCCcChHH---HHHHHHHHhhhCCCcEEEecCchhhh
Confidence 467899999999976432 344555543333 469999999987654321 1222222221 24589999999963
|
| >2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.70 E-value=0.01 Score=47.56 Aligned_cols=85 Identities=15% Similarity=0.210 Sum_probs=52.8
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCC--CCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDK--EAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
...|..+++.....+++.|.|..... ...-.|+|............ .. ..+-...+.|++|+|+|.|.+
T Consensus 19 ~~~P~~l~~~~~~~~sv~l~W~~p~~g~i~~Y~v~~~~~~~~~~~~~~-----~~----~~~~~~~~~i~~L~p~t~Y~~ 89 (119)
T 2ee2_A 19 SEAPTEVGVKVLSSSEISVHWEHVLEKIVESYQIRYWAAHDKEEAANR-----VQ----VTSQEYSARLENLLPDTQYFI 89 (119)
T ss_dssp CCCCCSCEEEEEETTEEEEECCCCSCTTCCEEEEEEEESSSCGGGCEE-----EE----EETTCSEEEECSCCTTCEEEE
T ss_pred CCCCCcEEEEEccCCEEEEEecCCCCCccceEEEEEEECCCcccCcEE-----EE----cCCCEeEEEECCCCCCCEEEE
Confidence 34566777777678999999988743 22346667654322111000 00 111234578999999999999
Q ss_pred EeCc--------cCceeEEECCCC
Q 012895 129 RCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 129 rv~~--------~s~~~~F~T~p~ 144 (454)
||.. .+....|+|.+.
T Consensus 90 ~V~A~n~~G~g~~S~~~~~~T~~~ 113 (119)
T 2ee2_A 90 EVGACNSAGCGPPSDMIEAFTKKA 113 (119)
T ss_dssp EEEEECSSSCCCCCCCEEEECCCC
T ss_pred EEEEEcCCccCCCCCCEEEECCCC
Confidence 9953 355677888653
|
| >1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.68 E-value=0.005 Score=49.00 Aligned_cols=80 Identities=16% Similarity=0.175 Sum_probs=52.2
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
..|..+++.....+++.|.|...... ..-.|+|.......+..... ....+.|++|+|+|.|.
T Consensus 19 ~~P~~l~~~~~~~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~-------------~~~~~~i~~L~p~t~Y~ 85 (116)
T 1x5g_A 19 GPAPNLRAYAASPTSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQDVDV-------------SSHSYTINGLKKYTEYS 85 (116)
T ss_dssp CCCSSCEEEEEETTEEEEECCCCSCCSSCCSEEEEEEEETTCCCCCCEEE-------------CSSEEEECSCCTTCEEE
T ss_pred cCCCccEEEecCCCEEEEEEeCCCCCCCcccEEEEEEEECCCCccEEEec-------------CCceEEEcCCCCCCEEE
Confidence 35667777777789999999876422 23467776654332211111 12356789999999999
Q ss_pred EEeCc--------cCceeEEECCCC
Q 012895 128 YRCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 128 Yrv~~--------~s~~~~F~T~p~ 144 (454)
+||.. .+....|+|.+.
T Consensus 86 ~~V~A~n~~G~g~~S~~~~~~T~~~ 110 (116)
T 1x5g_A 86 FRVVAYNKHGPGVSTPDVAVRTLSD 110 (116)
T ss_dssp EEEEEECSSCCCCBCCCCCEECCCS
T ss_pred EEEEEEcCCCcCCCCCCEEEECCCC
Confidence 99853 245667888653
|
| >2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.64 E-value=0.017 Score=45.45 Aligned_cols=78 Identities=13% Similarity=0.103 Sum_probs=48.7
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCCC----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKEA----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
..|..+++.....+++.++|.....+. .-.|.|..... ..... .-...++|+||+|||.|.
T Consensus 9 s~v~~l~v~~~t~~Sv~LsW~~p~~~~~~i~~Y~v~~~~~~~--~~~~~-------------~~~t~~~i~gL~PgT~Y~ 73 (104)
T 2dle_A 9 IQVFDVTAVNISATSLTLIWKVSDNESSSNYTYKIHVAGETD--SSNLN-------------VSEPRAVIPGLRSSTFYN 73 (104)
T ss_dssp CBEEEEEEEEECSSCEEEEEEESCSTTCCSCEEEEEEECSSC--EEEEE-------------ESSSEEECCSCCSSCEEE
T ss_pred CCCceEEEEEeecCEEEEEEcCCCCCCCceEEEEEEEECCCC--eEEEc-------------CCCCEEEECCCCCCCEEE
Confidence 345566776666899999998764332 24566653311 01100 112457899999999999
Q ss_pred EEeCc-------cCceeEEECCCC
Q 012895 128 YRCGG-------RGPEFSFKMPPA 144 (454)
Q Consensus 128 Yrv~~-------~s~~~~F~T~p~ 144 (454)
++|.. .+....++|.|.
T Consensus 74 ~~V~A~~~~~~~~p~~~~~~T~p~ 97 (104)
T 2dle_A 74 ITVCPVLGDIEGTPGFLQVHTPPV 97 (104)
T ss_dssp EEEEEESSSCCCBCEEEEEECCCC
T ss_pred EEEEEEECCcccCCeeEEEEccCC
Confidence 99863 133556778764
|
| >2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.63 E-value=0.0067 Score=47.60 Aligned_cols=83 Identities=12% Similarity=0.232 Sum_probs=51.2
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCCCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEeC
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKEAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCG 131 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv~ 131 (454)
..|..+++.....+++.|+|.-......-.|+|.......+.... ... ...- .+.|+||+|+|.|.++|.
T Consensus 10 ~~P~~l~~~~~~~~sv~lsW~~p~~~~~Y~v~y~~~~~~~~~~~~----~~~----~~~~--~~~l~~L~p~t~Y~~~V~ 79 (104)
T 2dkm_A 10 PPPRALTLAAVTPRTVHLTWQPSAGATHYLVRCSPASPKGEEEER----EVQ----VGRP--EVLLDGLEPGRDYEVSVQ 79 (104)
T ss_dssp CCCCCCEEEEECSSEEEEECCCCSSCSEEEEEEEESSSCCSSCCE----EEE----ESSS--EEEEESCCTTCCEEEEEE
T ss_pred CCCceeEEEecCCCEEEEEEeCCCCCCeEEEEEEECCCCCCcceE----EEe----cCCC--EEEECCCCCCCEEEEEEE
Confidence 467778888777899999997664333456667654332111000 000 1112 688999999999999986
Q ss_pred c-------cCceeEEECCCC
Q 012895 132 G-------RGPEFSFKMPPA 144 (454)
Q Consensus 132 ~-------~s~~~~F~T~p~ 144 (454)
. ......++|.|.
T Consensus 80 A~~~~~~s~p~~~~~~T~p~ 99 (104)
T 2dkm_A 80 SLRGPEGSEARGIRARTPTS 99 (104)
T ss_dssp EECSSSBCCCEEEECCCCCC
T ss_pred EECCCCCCCCEEEEEEcCCC
Confidence 3 123445677653
|
| >1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0047 Score=48.84 Aligned_cols=78 Identities=15% Similarity=0.248 Sum_probs=48.2
Q ss_pred CCeeEEEEecCCCcEEEEE--EeCCCC---CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 53 DPQQVHISLAAKDYIRVSW--ITDDKE---AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W--~t~~~~---~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
.|..+++.....+++.|.| ..+... ..-.|+|....+ . ..+... .. . ++|.||+|+|.|.
T Consensus 12 ~p~~l~~~~~~~~sv~l~W~~~~P~~~ng~~~Y~v~y~~~~~--------~-~~~~~~--~~--~--~~i~~L~p~t~Y~ 76 (107)
T 1x5a_A 12 SGLSLKLVKKEPRQLELTWAGSRPRNPGGNLSYELHVLNQDE--------E-WHQMVL--EP--R--VLLTKLQPDTTYI 76 (107)
T ss_dssp CSCCCCEEEEETTEEEEECCCCCSSCCSSCCEEEEEEECSSC--------E-EEEEES--SS--E--EEEESCCSSCEEE
T ss_pred CCCceEEEecCCCEEEEEECCCCCCCCCCceEEEEEEEeCCC--------C-ceEEEe--cc--e--EEECCCCCCCEEE
Confidence 4455566666689999999 655332 223455654311 0 011111 11 1 7899999999999
Q ss_pred EEeCc--------cCceeEEECCCCC
Q 012895 128 YRCGG--------RGPEFSFKMPPAN 145 (454)
Q Consensus 128 Yrv~~--------~s~~~~F~T~p~~ 145 (454)
+||.. .+....|+|.++.
T Consensus 77 f~V~A~~~~G~g~~S~~~~~~T~~~~ 102 (107)
T 1x5a_A 77 VRVRTLTPLGPGPFSPDHEFRTSPPS 102 (107)
T ss_dssp EEEEEECSSSCCCCCCCEEEECCCCS
T ss_pred EEEEEECCCccCCCCCCEEEEECCCC
Confidence 99963 3567789997753
|
| >2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A | Back alignment and structure |
|---|
Probab=96.58 E-value=0.016 Score=45.41 Aligned_cols=82 Identities=17% Similarity=0.228 Sum_probs=51.0
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCC-CceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGR-YNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYR 129 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yr 129 (454)
..|..+.+.....+++.|+|.-.... ..-.|+|...... ...... ..+-...+.|+||+|||.|.++
T Consensus 4 ~~P~~l~v~~~t~~sv~lsW~~p~~~i~~Y~v~y~~~~~~~~~~~~~-----------v~~~~~~~~l~~L~p~t~Y~~~ 72 (104)
T 2rb8_A 4 DAPSQIEVKDVTDTTALITWMPPSQPVDGFELTYGIKDVPGDRTTID-----------LTEDENQYSIGNLKPDTEYEVS 72 (104)
T ss_dssp CCCEEEEEESCCSSCEEEEEECCSSCCSEEEEEEEETTCTTCCEEEE-----------EETTCCEEEECSCCTTCEEEEE
T ss_pred CCCCccEEEEecCCeEEEEEcCCCCccceEEEEEEECcCCCceEEEE-----------cCCCcCEEEeCCCCCCCEEEEE
Confidence 35778888877789999999776422 2346777654311 111110 1112335679999999999999
Q ss_pred eCc-------cCceeEEECCCC
Q 012895 130 CGG-------RGPEFSFKMPPA 144 (454)
Q Consensus 130 v~~-------~s~~~~F~T~p~ 144 (454)
|.. ......|+|.+.
T Consensus 73 V~A~~~~g~s~p~~~~~~T~~~ 94 (104)
T 2rb8_A 73 LISRRGDMSSNPAKETFTTGLA 94 (104)
T ss_dssp EEEEETTEECCCEEEEEECCC-
T ss_pred EEEEeCCccCCCEEEEEECCCC
Confidence 863 123456888664
|
| >2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0066 Score=47.93 Aligned_cols=80 Identities=10% Similarity=0.185 Sum_probs=51.7
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCC----CccEEEEeecCC--CCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEE
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKE----AESVVEYGKLPG--RYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 126 (454)
.|..+++.....+++.|.|.-.... ..-.|+|..... ....... . ... ..+.|++|+|++.|
T Consensus 10 ~p~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~-~---------~~~--~~~~i~~L~p~t~Y 77 (109)
T 2e7h_A 10 AVSDIRVTRSSPSSLSLAWAVPRAPSGAVLDYEVKYHEKGAEGPSSVRFL-K---------TSE--NRAELRGLKRGASY 77 (109)
T ss_dssp CCCCCEEEEEETTEEEEECCCCCCSSSCCCEEEEEEEETTCCSTTTSEEE-E---------ESS--SEEEEESCCTTSCE
T ss_pred CCCccEEEecCCCEEEEEeCCCCCCCCcEeEEEEEEEECCCCCCceeEEE-c---------cCC--CEEEECCCCCCCeE
Confidence 3566777766789999999877432 234667766541 1111111 0 111 25788999999999
Q ss_pred EEEeCc--------cCceeEEECCCC
Q 012895 127 YYRCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 127 ~Yrv~~--------~s~~~~F~T~p~ 144 (454)
.+||.. .+....|+|.+.
T Consensus 78 ~~~V~A~n~~G~g~~S~~~~~~T~~~ 103 (109)
T 2e7h_A 78 LVQVRARSEAGYGPFGQEHHSQTQLD 103 (109)
T ss_dssp EEEEEEECSSCBCCCCSCEECCCCCC
T ss_pred EEEEEEEeCCccCCCCCCEEEEcCCC
Confidence 999953 356778888775
|
| >2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.55 E-value=0.01 Score=47.39 Aligned_cols=83 Identities=17% Similarity=0.316 Sum_probs=53.2
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCCCc----cEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKEAE----SVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
..|..+++.....+++.|.|.-...... -.|+|............ ....-...+.|++|+|++.|.
T Consensus 19 ~~P~~l~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~----------~~~~~~~~~~i~~L~p~t~Y~ 88 (119)
T 2ed7_A 19 SAPRDVVPVLVSSRFVRLSWRPPAEAKGNIQTFTVFFSREGDNRERALN----------TTQPGSLQLTVGNLKPEAMYT 88 (119)
T ss_dssp CCCSCCEEEEECSSCEEEECCCCSCCSSCEEEEEEEEEESSCCCCEEEE----------CCCTTCCEEEECSCCSSSEEE
T ss_pred cCCcceEEEecCCCEEEEEEeCCCCCCCcEEEEEEEEEeCCCCcceeeE----------eecCCceEEEeCCCCCCCEEE
Confidence 4677788887778999999987643222 34556554332221110 011224457899999999999
Q ss_pred EEeCc--------cCceeEEECCCC
Q 012895 128 YRCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 128 Yrv~~--------~s~~~~F~T~p~ 144 (454)
+||.. .+....++|.+.
T Consensus 89 ~~V~A~n~~G~g~~S~~~~~~T~~~ 113 (119)
T 2ed7_A 89 FRVVAYNEWGPGESSQPIKVATQPE 113 (119)
T ss_dssp ECCEEEESSCBCSCCCCEEEECCCC
T ss_pred EEEEEEcCCccCCCcCCEEEEeCCC
Confidence 99853 356677888654
|
| >3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.55 E-value=0.021 Score=57.17 Aligned_cols=138 Identities=13% Similarity=0.107 Sum_probs=79.4
Q ss_pred CCCeEEEEEecCCCCCCh---HH----HHHHhh-----------cCCCCeEeecCccccCCCC-----------------
Q 012895 145 NFPIEFAIVGDLGQTEWT---NS----TLDHVG-----------SKDYDVFLLPGDLSYADFQ----------------- 189 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~~---~~----~l~~i~-----------~~~pd~vl~~GDl~y~~~~----------------- 189 (454)
....++++++|+|.+... .. .++.+. ..++.-+|++||.+.....
T Consensus 198 ~~~~~ialVSGL~igs~~~~~~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~~~~e~~~~~~y~~~~~~~ 277 (476)
T 3e0j_A 198 DTDRFVLLVSGLGLGGGGGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRDSINKAKYLTKKTQA 277 (476)
T ss_dssp SSCCEEEEECCCCBTSSCHHHHHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC-------------CHHHHHH
T ss_pred CCCCEEEEECCcccCCCcccchHHHHHHHHHHcCCCCCccccchhhceeEEEEECCccccccccchhhhhhhccccccch
Confidence 456799999999988753 11 223332 3467889999999975422
Q ss_pred --hhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCCCCcchhhhhhhhccCCCC-CCCCCCCceEEEEeCeEEEEEeccc
Q 012895 190 --QPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYE-ESGSSSNLYYSFDIAGAHIIMLGSY 266 (454)
Q Consensus 190 --~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~ys~~~g~v~fi~Lds~ 266 (454)
...++.+.+++..+...+|+..+|||||-.+. .+++..+.. ..|..... .+-..-..-|.+++++++|++....
T Consensus 278 ~~~~~~~~ld~~L~~l~~~i~V~lmPG~~DP~~~-~lPQqplh~--~lfp~s~~~~~~~~vtNP~~~~i~G~~~LgtsGq 354 (476)
T 3e0j_A 278 ASVEAVKMLDEILLQLSASVPVDVMPGEFDPTNY-TLPQQPLHP--CMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQ 354 (476)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCEEEECCTTSSSCS-SSSCCCCCT--TSCHHHHTSTTEEECCSSEEEEETTEEEEECSSH
T ss_pred hhHHHHHHHHHHHHhcccCceEEecCCCCCcccc-cCCCCCcCH--HHhhhhhhcCccEEeCCCeEEEECCEEEEEECCC
Confidence 02345566777788888999999999998532 211111110 00100000 0000012245689999999988642
Q ss_pred C-----CCCCCHHHHHHHHHHHHh
Q 012895 267 T-----DFDEDSAQYKWLKADLAK 285 (454)
Q Consensus 267 ~-----~~~~~~~Q~~WL~~~L~~ 285 (454)
. .+...+.-++.|++.|+.
T Consensus 355 nidDi~ky~~~~~~l~~me~~Lkw 378 (476)
T 3e0j_A 355 NVSDIFRYSSMEDHLEILEWTLRV 378 (476)
T ss_dssp HHHHHHHHSCCCCHHHHHHHHHHB
T ss_pred CHHHHHhcCCCCCHHHHHHHHHHH
Confidence 1 012234566788888865
|
| >3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* | Back alignment and structure |
|---|
Probab=96.54 E-value=0.0029 Score=59.90 Aligned_cols=68 Identities=21% Similarity=0.246 Sum_probs=44.1
Q ss_pred EEEEEecCCCCCCh-HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhh--cCCCeeecCCCcccC
Q 012895 149 EFAIVGDLGQTEWT-NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYA--SSRPWMVTEGNHEIE 219 (454)
Q Consensus 149 ~f~~igD~~~~~~~-~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~--~~~P~~~v~GNHD~~ 219 (454)
+++++||+|..... .++++.+.....+-++++||+++.+....+ . ...+..+. ....++.+.||||..
T Consensus 57 ~i~viGDIHG~~~~L~~ll~~~g~~~~~~~vfLGD~VDrG~~s~e--v-l~lL~~lk~~~p~~v~~lrGNHE~~ 127 (299)
T 3e7a_A 57 PLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLE--T-ICLLLAYKIKYPENFFLLRGNHECA 127 (299)
T ss_dssp SEEEECBCTTCHHHHHHHHHHHCSTTSSCEEECSCCSSSSSCHHH--H-HHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred CEEEEecCCCCHHHHHHHHHHhCCCCCccEEeCCcccCCCCCcHH--H-HHHHHHHHhhCCCcEEEEecCchhh
Confidence 58999999976432 344555555566889999999987665321 1 22222222 123589999999973
|
| >1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.53 E-value=0.015 Score=46.58 Aligned_cols=87 Identities=14% Similarity=0.169 Sum_probs=54.6
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCC--C----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDK--E----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATT 125 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~--~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 125 (454)
..|..+++.....+++.|.|..... . ..-.|+|............ .... ...+-...+.|++|+|+|.
T Consensus 17 ~~P~~~~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~i~~L~p~t~ 90 (122)
T 1va9_A 17 GPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYS--IVEM----KATGDSEVYTLDNLKKFAQ 90 (122)
T ss_dssp SCCEEEEEEECSSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCB--CCBC----CCCSSEEEEEEESCCSSCC
T ss_pred CCCcceEEEeccCCEEEEEEeCCCCcCCCCcEeEEEEEEEECCCCCCcceE--EEEE----ecCCceeEEEeCCCCCCCE
Confidence 4678888887778999999998853 1 2345667655432111000 0000 0123356778999999999
Q ss_pred EEEEeCc--------cCceeEEECCCC
Q 012895 126 YYYRCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 126 Y~Yrv~~--------~s~~~~F~T~p~ 144 (454)
|.+||.. .+....|+|++.
T Consensus 91 Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 117 (122)
T 1va9_A 91 YGVVVQAFNRAGTGPSSSEINATTLES 117 (122)
T ss_dssp EEEEEEEEETTEECCCCCCEECCCCSS
T ss_pred EEEEEEEEcCCCCCCCccCEEEEeCCC
Confidence 9999963 245667777653
|
| >3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A | Back alignment and structure |
|---|
Probab=96.53 E-value=0.0033 Score=59.94 Aligned_cols=71 Identities=13% Similarity=0.149 Sum_probs=44.1
Q ss_pred CCeEEEEEecCCCCCC-hHHHHHHhhcC-CCCeEeecCccccCCCChhhHHHHhhhhhhhhc--CCCeeecCCCcccC
Q 012895 146 FPIEFAIVGDLGQTEW-TNSTLDHVGSK-DYDVFLLPGDLSYADFQQPLWDSFGRLVEPYAS--SRPWMVTEGNHEIE 219 (454)
Q Consensus 146 ~~~~f~~igD~~~~~~-~~~~l~~i~~~-~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~--~~P~~~v~GNHD~~ 219 (454)
...|++++||+|.... ..++++..... ..+.++++||+++.+....+ . ...+..+.. ...++.+.||||..
T Consensus 58 ~~~ri~viGDIHG~~~~L~~ll~~~g~~~~~~~~vflGD~VDRG~~s~e--v-l~lL~~lk~~~p~~v~~lrGNHE~~ 132 (315)
T 3h63_A 58 ETEKITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVE--V-ILTLFGFKLLYPDHFHLLRGNHETD 132 (315)
T ss_dssp TTCEEEEECCCTTCHHHHHHHHHHHCCCBTTBCEEEESCCSSSSTTHHH--H-HHHHHHHHHHSTTTEEEECCTTSSH
T ss_pred CCceEEEEecCCCCHHHHHHHHHHhCCCCCCCEEEEeCCccCCCcChHH--H-HHHHHHhhhhcCCcEEEEecCcccc
Confidence 4578999999997632 23344444333 33569999999987654321 1 222232221 23588999999964
|
| >3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A | Back alignment and structure |
|---|
Probab=96.53 E-value=0.0023 Score=61.94 Aligned_cols=69 Identities=16% Similarity=0.187 Sum_probs=44.6
Q ss_pred eEEEEEecCCCCCC-hHHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcC--CCeeecCCCcccC
Q 012895 148 IEFAIVGDLGQTEW-TNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASS--RPWMVTEGNHEIE 219 (454)
Q Consensus 148 ~~f~~igD~~~~~~-~~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~--~P~~~v~GNHD~~ 219 (454)
.+++++||+|.... ..++++.......+-++++||+++.+....+ . ...+..+... -.++.+.||||..
T Consensus 70 ~pi~ViGDIHG~~~dL~~ll~~~g~~~~~~~vfLGD~VDRG~~s~E--v-l~lL~~lk~~~p~~v~llrGNHE~~ 141 (357)
T 3ll8_A 70 APVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIE--C-VLYLWALKILYPKTLFLLRGNHECR 141 (357)
T ss_dssp SSEEEECCCTTCHHHHHHHHHHHCCTTTCCEEECSCCSSSSTTHHH--H-HHHHHHHHHHCTTTEEECCCTTSSH
T ss_pred ccceeeccCCCCHHHHHHHHHhcCCCCCcEEEECCCccCCCcChHH--H-HHHHHHhhhhcCCcEEEEeCchhhh
Confidence 35899999997642 2344554445667889999999987654321 1 2222223222 3488999999974
|
| >2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.50 E-value=0.014 Score=47.58 Aligned_cols=82 Identities=21% Similarity=0.354 Sum_probs=51.5
Q ss_pred CCCCe-eEEEEecCCCcEEEEEEeCCCCC-cc-EEEEeecCC-----------CCceEEEeEeEEEeeeeeecCeEEEEE
Q 012895 51 ESDPQ-QVHISLAAKDYIRVSWITDDKEA-ES-VVEYGKLPG-----------RYNTVATGEHTSYQFFFYKSGKIHHVK 116 (454)
Q Consensus 51 ~~~p~-~v~l~~~~~~~~~v~W~t~~~~~-~~-~v~y~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (454)
...|. .+++.....++++|.|..+.... .. .++|..... ..+..... .. ....+
T Consensus 16 P~~P~~~~~~~~~~~~sv~L~W~~p~~~g~~~Y~~~Y~~~~~~~~~~~~~~~~~~w~~~~~----------~~--~~~~~ 83 (127)
T 2dmk_A 16 PNPPSIREELCTASHDTITVHWISDDEFSISSYELQYTIFTGQANFISLYNSVDSWMIVPN----------IK--QNHYT 83 (127)
T ss_dssp CCCCEEEEEEEEEETTEEEEEEECSCCSSEEEEEEEEEEESCCSCHHHHHHTGGGSEEEEE----------EC--SSEEE
T ss_pred CcCCCCCCEEEeeeCCEEEEEECCCCCCCccceEEEEEEecccccccccccCCCCcEEeec----------cc--CCeEE
Confidence 34676 77777777999999999886433 23 677764110 11111110 01 12356
Q ss_pred ECCCCCCCEEEEEeCc-------cCceeEEECCCC
Q 012895 117 IGPLEPATTYYYRCGG-------RGPEFSFKMPPA 144 (454)
Q Consensus 117 l~gL~p~t~Y~Yrv~~-------~s~~~~F~T~p~ 144 (454)
|+||+|++.|.|||.. .+....++|++.
T Consensus 84 v~gL~p~t~Y~frV~A~N~~G~~~S~~v~~~T~~~ 118 (127)
T 2dmk_A 84 VHGLQSGTRYIFIVKAINQAGSRNSEPTRLKTNSQ 118 (127)
T ss_dssp EESCCSSCEEEEEEEEEESSCEEECCCEEEECCSS
T ss_pred ECCCCCCCEEEEEEEEEeCCCCCCCcCeEeEeCCC
Confidence 8899999999999964 245667888763
|
| >2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.50 E-value=0.013 Score=45.54 Aligned_cols=81 Identities=11% Similarity=0.166 Sum_probs=51.4
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCC--CCccEEEEeecCCCC-ceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDK--EAESVVEYGKLPGRY-NTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~--~~~~~v~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
..|..+.+.....+++.|.|..... ...-.|+|....... +.... ......+.|++|+|++.|.|
T Consensus 9 ~~P~~~~~~~~~~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~~~~------------~~~~~~~~i~~L~p~t~Y~~ 76 (106)
T 2dju_A 9 KPPIDLVVTETTATSVTLTWDSGNSEPVTYYGIQYRAAGTEGPFQEVD------------GVATTRYSIGGLSPFSEYAF 76 (106)
T ss_dssp CCCEEEEEEEEETTEEEEEEECCCSSCCSEEEEEEEETTCCSCCCCBC------------CCCSSEEEEESCCTTCEEEE
T ss_pred cCCCCcEEEeccCCEEEEEEcCCCCCCceEEEEEEEECCCCCCeEEcc------------CCCccEEEEeCCCCCcEEEE
Confidence 4677777777678899999997631 133466776554321 11111 01122457889999999999
Q ss_pred EeCc--------cCceeEEECCCC
Q 012895 129 RCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 129 rv~~--------~s~~~~F~T~p~ 144 (454)
||.. .+....++|.+.
T Consensus 77 ~V~A~n~~G~~~~S~~~~~~T~~~ 100 (106)
T 2dju_A 77 RVLAVNSIGRGPPSEAVRARTGEQ 100 (106)
T ss_dssp EEEEECSSCBCCCCCCEEEECCCS
T ss_pred EEEEEeCCccCCCcccEEeEcCCC
Confidence 9963 245667888653
|
| >1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.44 E-value=0.013 Score=46.13 Aligned_cols=80 Identities=13% Similarity=0.212 Sum_probs=48.3
Q ss_pred CeeEEEEecCCCcEEEEEEeCCCC-----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 54 PQQVHISLAAKDYIRVSWITDDKE-----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 54 p~~v~l~~~~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
|..+.+.....+++.|.|...... ..-.|+|.............. .. ...++|++|+|++.|.|
T Consensus 11 P~~p~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~---------~~--~~~~~v~~L~p~t~Y~f 79 (109)
T 1x5x_A 11 PASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYD---------GE--DLAYTVKNLRRSTKYKF 79 (109)
T ss_dssp CCCCEEEEECSSEEEEECCCCSSCCSSSSCEEEEEECCSSSSCCCEEEEE---------ES--CSEEEEESCCSSCEEEE
T ss_pred CCCCEEEEccCCEEEEEEcCCCCCCCCcccEEEEEEecCCCCcceEEeEe---------CC--ccEEEECCCCCCCEEEE
Confidence 333346666688999999876432 224666765543212111100 11 23467899999999999
Q ss_pred EeCc--------cCceeEEECCCC
Q 012895 129 RCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 129 rv~~--------~s~~~~F~T~p~ 144 (454)
||.. .+....++|.+.
T Consensus 80 rV~A~n~~G~s~~S~~~~~~T~~~ 103 (109)
T 1x5x_A 80 KVIAYNSEGKSNPSEVVEFTTCPD 103 (109)
T ss_dssp EEEEECSSCEEEECCCEEEECCCC
T ss_pred EEEEEeCCCCcCCccCEEeEeCCC
Confidence 9964 245667788653
|
| >2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.42 E-value=0.015 Score=46.68 Aligned_cols=81 Identities=16% Similarity=0.248 Sum_probs=53.2
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCC--C----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCC
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDK--E----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPAT 124 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~--~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 124 (454)
...|..+.+.....+++.|.|..... . ..-.|+|........... ...-...+.|.+|+|+|
T Consensus 29 ~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~------------~~~~~~~~~i~~L~p~t 96 (124)
T 2ed9_A 29 SAPPQNVSLEVVNSRSIKVSWLPPPSGTQNGFITGYKIRHRKTTRRGEMET------------LEPNNLWYLFTGLEKGS 96 (124)
T ss_dssp SSCCBSCCEEEEETTEEEEECBCCCTTTCCSCCCEEEEEEEESSSSCCEEE------------ECSSCSEEEEECCCSSC
T ss_pred CCCCeeeEEEEcCCCEEEEEEECcCCcCCCcEEeEEEEEEEECCCCcceEE------------ecCCcCEEEEcCCCCCC
Confidence 34677777877778999999988753 1 224566766543322111 11223456789999999
Q ss_pred EEEEEeCc--------cCceeEEECCC
Q 012895 125 TYYYRCGG--------RGPEFSFKMPP 143 (454)
Q Consensus 125 ~Y~Yrv~~--------~s~~~~F~T~p 143 (454)
.|.+||.. .+....|+|+.
T Consensus 97 ~Y~~~V~A~n~~G~g~~S~~~~~~T~e 123 (124)
T 2ed9_A 97 QYSFQVSAMTVNGTGPPSNWYTAETPE 123 (124)
T ss_dssp EEEECEEEECSSCBCCCCCCEEEECCC
T ss_pred EEEEEEEEEcCCccCCCCCCEEEECCC
Confidence 99999853 35667788865
|
| >1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.41 E-value=0.009 Score=47.34 Aligned_cols=81 Identities=17% Similarity=0.250 Sum_probs=52.0
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC--CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE--AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYR 129 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yr 129 (454)
..|..+++.....+++.|.|...... ..-.|+|............. .. ...+.|++|+|+|.|.+|
T Consensus 19 ~~P~~l~~~~~~~~sv~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~~~----------~~--~~~~~i~~L~p~t~Y~~~ 86 (115)
T 1x5z_A 19 GQPLNFKAEPESETSILLSWTPPRSDTIANYELVYKDGEHGEEQRITI----------EP--GTSYRLQGLKPNSLYYFR 86 (115)
T ss_dssp CCCEEEEEECSSSSEEEEEEECCSCCCCCEEEECBEESSSCCCBCCEE----------CS--SSEEEEECCCTTCEEEEC
T ss_pred CCCccCEeeeCCCCEEEEEEcCCCCCCccEEEEEEEeCCCCCceEEec----------CC--CcEEEECCCCCCCeEEEE
Confidence 36788888777789999999887532 23355565443222111000 11 245678999999999999
Q ss_pred eCc--------cCceeEEECCCC
Q 012895 130 CGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 130 v~~--------~s~~~~F~T~p~ 144 (454)
|.. .+....|+|.+.
T Consensus 87 V~A~n~~G~g~~S~~~~~~T~~~ 109 (115)
T 1x5z_A 87 LAARSPQGLGASTAEISARTMQS 109 (115)
T ss_dssp EEEECSSCEEEECCCEEEECCCC
T ss_pred EEEECCCcccCCCcCEEEecCCC
Confidence 963 256677888654
|
| >3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C | Back alignment and structure |
|---|
Probab=96.38 E-value=0.024 Score=44.24 Aligned_cols=72 Identities=14% Similarity=0.149 Sum_probs=46.0
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCC------CCccEEEEeecCCCC--ceEEEeEeEEEeeeeeecCeEEEEEECCCCC
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDK------EAESVVEYGKLPGRY--NTVATGEHTSYQFFFYKSGKIHHVKIGPLEP 122 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~------~~~~~v~y~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p 122 (454)
..+|..+.+.....+++.|+|.-... ...-.|.|....... ..... .. .. -...+.|++|+|
T Consensus 5 ~~~P~~~~~~~~s~tsi~v~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~~~~~----~v-----~~-~~~~~~l~~L~p 74 (102)
T 3n1f_C 5 ITGPHIAYTEAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYKRD----VV-----EG-SKQWHMIGHLQP 74 (102)
T ss_dssp CSCCEEEEEEECSSSCEEEEEECCC-----CCCCEEEEEEEETTCCCGGGCEEE----EE-----ET-TCSEEEECSCCT
T ss_pred CCCCceeEEEEcCCCEEEEEeECCChhhcCCccceEEEEEEECCCCCCCceEEE----EE-----cC-CceEEECCCCCC
Confidence 35788888888889999999987742 122367787654321 11100 00 11 122468999999
Q ss_pred CCEEEEEeCc
Q 012895 123 ATTYYYRCGG 132 (454)
Q Consensus 123 ~t~Y~Yrv~~ 132 (454)
+|.|.++|..
T Consensus 75 ~t~Y~v~V~A 84 (102)
T 3n1f_C 75 ETSYDIKMQC 84 (102)
T ss_dssp TCEEEEEEEE
T ss_pred CCEEEEEEEE
Confidence 9999999863
|
| >1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.38 E-value=0.0093 Score=48.52 Aligned_cols=83 Identities=10% Similarity=0.141 Sum_probs=53.0
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCCC----ccEEEEeecCCCCc-eEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKEA----ESVVEYGKLPGRYN-TVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 126 (454)
..|..+++.....+++.|.|....... .-.|+|........ .... ....-...+.|++|+|+|.|
T Consensus 29 ~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~----------~~~~~~~~~~i~~L~p~t~Y 98 (130)
T 1wfo_A 29 GPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVE----------VLAPSARQYTATGLKPESVY 98 (130)
T ss_dssp CCCCCCEEEEECSSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSCCCEE----------EECTTCCEEEEESCCSSSEE
T ss_pred CCCCceEEEecCCCEEEEEEcCCCCCCCceEEEEEEEEECCCCCceEEEE----------EeCCCceEEEEcCCCCCCEE
Confidence 467778888777899999998774322 34566765532211 1000 01223455778999999999
Q ss_pred EEEeCc--------cCceeEEECCCC
Q 012895 127 YYRCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 127 ~Yrv~~--------~s~~~~F~T~p~ 144 (454)
.+||.. .+....|+|.+.
T Consensus 99 ~~~V~A~n~~G~g~~S~~~~~~T~~~ 124 (130)
T 1wfo_A 99 LFRITAQTRKGWGEAAEALVVTTEKR 124 (130)
T ss_dssp EEEEEEECSSCEEEEEEEEEECCSSC
T ss_pred EEEEEEEeCCcCCCCcccEEEecCCC
Confidence 999964 244567888654
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=96.38 E-value=0.0044 Score=63.02 Aligned_cols=70 Identities=13% Similarity=0.177 Sum_probs=44.1
Q ss_pred CCeEEEEEecCCCCCC-hHHHHHHhhcCC-CCeEeecCccccCCCChhhHHHHhhhhhhh--hcCCCeeecCCCccc
Q 012895 146 FPIEFAIVGDLGQTEW-TNSTLDHVGSKD-YDVFLLPGDLSYADFQQPLWDSFGRLVEPY--ASSRPWMVTEGNHEI 218 (454)
Q Consensus 146 ~~~~f~~igD~~~~~~-~~~~l~~i~~~~-pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l--~~~~P~~~v~GNHD~ 218 (454)
...+++++||+|.... ...+++.+.... .|.+|++||+++.+.... +.+ ..+..+ .....++.+.||||.
T Consensus 211 ~~~~~~vigDiHG~~~~l~~~l~~~~~~~~~~~~v~lGD~vdrG~~s~--e~~-~~l~~l~~~~~~~~~~lrGNHE~ 284 (477)
T 1wao_1 211 ETEKITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSV--EVI-LTLFGFKLLYPDHFHLLRGNHET 284 (477)
T ss_dssp SSCEEEEECBCTTCHHHHHHHHHHHCCCBTTBCEEEESCCSSSSTTHH--HHH-HHHHHHHHHSTTTEEEECCTTSS
T ss_pred CCcceEEEeCCCCCHHHHHHHHHHcCCCCCcCeEEEeccccCCCcchH--HHH-HHHHHHHhhCCCceEeecCCccH
Confidence 4589999999997632 233445544333 356999999998765432 122 222222 123579999999996
|
| >1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.30 E-value=0.041 Score=41.34 Aligned_cols=66 Identities=18% Similarity=0.350 Sum_probs=41.0
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCCCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEeC
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKEAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCG 131 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv~ 131 (454)
..|..+++.....+++.++|...... .....|....+. ... .. ... -...+++|+||+.|+|+|.
T Consensus 5 ~~P~~l~~~~~~~~sv~L~W~~~~~~-~~i~~Y~v~~~~-~~~--~~---------~~~--~~~~~~~L~~~t~Y~~~V~ 69 (88)
T 1k85_A 5 TAPTNLASTAQTTSSITLSWTASTDN-VGVTGYDVYNGT-ALA--TT---------VTG--TTATISGLAADTSYTFTVK 69 (88)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSCC-SSEEEEEEEESS-SEE--EE---------ESS--SEEEECCCCSSCEEEEEEE
T ss_pred CCCCccEEEeccCCEEEEEECCCCCC-CCccEEEEEECC-EEE--ee---------cCC--CEEEeCCCCCCCEEEEEEE
Confidence 46777888777789999999877432 234444432111 111 11 111 1356889999999999996
Q ss_pred c
Q 012895 132 G 132 (454)
Q Consensus 132 ~ 132 (454)
.
T Consensus 70 A 70 (88)
T 1k85_A 70 A 70 (88)
T ss_dssp E
T ss_pred E
Confidence 4
|
| >2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.27 E-value=0.029 Score=45.62 Aligned_cols=85 Identities=19% Similarity=0.203 Sum_probs=51.8
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeC--CCCC----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCC
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITD--DKEA----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPAT 124 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~--~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 124 (454)
...|..+++.....+++.|.|... .... .-.|+|............ .. ........++|++|+|+|
T Consensus 19 ~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~-----~~---~~~~~~~~~~i~~L~p~t 90 (134)
T 2edx_A 19 SAPPQKVMCVSMGSTTVRVSWVPPPADSRNGVITQYSVAYEAVDGEDRGRHV-----VD---GISREHSSWDLVGLEKWT 90 (134)
T ss_dssp SSCSEEEEEECSSSSEEEEEEECCCSTTCSSCEEEEEEEEEESSSSCCCCEE-----EC---CCBTTCSEEEEESCCTTC
T ss_pred CCCCcccEEEeCCCCEEEEEecCCCccCCCCceeEEEEEEEECCCCCcccEE-----EE---eeCCCccEEEeCCCCCCC
Confidence 346788888777788999999987 3222 224455544322111000 00 012234567889999999
Q ss_pred EEEEEeCc--------cCceeEEECCC
Q 012895 125 TYYYRCGG--------RGPEFSFKMPP 143 (454)
Q Consensus 125 ~Y~Yrv~~--------~s~~~~F~T~p 143 (454)
.|.+||.. .+....|+|.+
T Consensus 91 ~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 117 (134)
T 2edx_A 91 EYRVWVRAHTDVGPGPESSPVLVRTDE 117 (134)
T ss_dssp EEEEEEEEEETTBCCCCCCCEEEECCC
T ss_pred EEEEEEEEEcCCCcCCCCCCEEeecCC
Confidence 99999853 24566788854
|
| >1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=96.26 E-value=0.0037 Score=63.10 Aligned_cols=69 Identities=16% Similarity=0.188 Sum_probs=43.1
Q ss_pred eEEEEEecCCCCCCh-HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcC--CCeeecCCCcccC
Q 012895 148 IEFAIVGDLGQTEWT-NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASS--RPWMVTEGNHEIE 219 (454)
Q Consensus 148 ~~f~~igD~~~~~~~-~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~--~P~~~v~GNHD~~ 219 (454)
.+++++||+|..... ..+++.......+-+|++||+++.+....+ ...++..+... -.++.+.||||..
T Consensus 83 ~pI~VIGDIHGq~~dL~~LL~~~g~p~~d~yVFLGDyVDRGp~S~E---vl~lL~aLk~~~P~~v~lLRGNHE~~ 154 (521)
T 1aui_A 83 APVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIE---CVLYLWALKILYPKTLFLLRGNHECR 154 (521)
T ss_dssp SSEEEECCCTTCHHHHHHHHHHHCCTTTCCEEECSCCSSSSSCHHH---HHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred cceeeccCCCCCHHHHHHHHHhcCCCCcceEEEcCCcCCCCCCHHH---HHHHHHHHhhhCCCeEEEecCCccHH
Confidence 468999999976432 234442224456889999999987665321 12222223222 3489999999974
|
| >2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.21 E-value=0.049 Score=43.88 Aligned_cols=86 Identities=12% Similarity=0.119 Sum_probs=50.8
Q ss_pred CCCCCeeEEEEe-cCCCcEEEEEEeC--CCCCcc----EEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCC
Q 012895 50 SESDPQQVHISL-AAKDYIRVSWITD--DKEAES----VVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEP 122 (454)
Q Consensus 50 ~~~~p~~v~l~~-~~~~~~~v~W~t~--~~~~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p 122 (454)
+...|..+++.. ...+++.|.|.-. ...... .|+|........ .. +.. ....-...+.|++|+|
T Consensus 18 P~~~P~~~~~~~~~s~~sv~l~W~pp~~~~~~g~i~~Y~v~~~~~~~~~~----~~---~~~--~~~~~~~~~~l~~L~p 88 (124)
T 2dbj_A 18 PSVAPLNVTVFLNESSDNVDIRWMKPPTKQQDGELVGYRISHVWQSAGIS----KE---LLE--EVGQNGSRARISVQVH 88 (124)
T ss_dssp CCSCCEEEEEEECSSSSEEEEEEECCSCCSTTCCEEEEEEEEEEEETTEE----EE---EEE--EEESTTSCEEEECCCS
T ss_pred CCCCCcceEEEecCCCCEEEEEEcCCCcccCCCeEeEEEEEEEECCCCCc----cc---eEE--EeCCCcceEEecCCCC
Confidence 345778888873 5588999999987 322212 344432211100 00 000 0011223567899999
Q ss_pred CCEEEEEeCc--------cCceeEEECCCC
Q 012895 123 ATTYYYRCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 123 ~t~Y~Yrv~~--------~s~~~~F~T~p~ 144 (454)
++.|.+||.. .+....|+|++.
T Consensus 89 ~t~Y~~~V~A~n~~G~Gp~S~~~~~~T~~~ 118 (124)
T 2dbj_A 89 NATCTVRIAAVTRGGVGPFSDPVKIFIPAH 118 (124)
T ss_dssp SSEEEECEEEEESSCBCCCCCCEEEECCCS
T ss_pred CCEEEEEEEEECCCccCCCCCCEEEEcCCC
Confidence 9999999963 356788999875
|
| >3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.17 E-value=0.047 Score=42.23 Aligned_cols=69 Identities=20% Similarity=0.289 Sum_probs=46.0
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCCC-ceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEe
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGRY-NTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRC 130 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv 130 (454)
.|..+.+.....+++.|+|.-+..+ ..-.|+|....... ..... ...-...++|+||+|+|.|.+||
T Consensus 4 ~P~~l~~~~~~~~sv~lsW~pP~~~i~~Y~v~y~~~~~~~~~~~~~-----------~~~~~t~~~i~~L~p~t~Y~~~V 72 (100)
T 3b83_A 4 PPFNIKVTNITLTTAVVTWQPPILPIEGILVTFGRKNDPSDETTVD-----------LTSSITSLTLTNLEPNTTYEIRI 72 (100)
T ss_dssp CCEEEEEESCCSSCEEEEEECCSSCCSEEEEEEEESSCTTTCEEEE-----------ECTTEEEEEECSCCTTCEEEEEE
T ss_pred cCCccEEEEecCCEEEEEEcCCcccCCEEEEEEEECCCCCCceEEE-----------ECCcceEEEECCCCCCCEEEEEE
Confidence 5777888777789999999876432 23467776544221 11110 12234567899999999999999
Q ss_pred Cc
Q 012895 131 GG 132 (454)
Q Consensus 131 ~~ 132 (454)
..
T Consensus 73 ~A 74 (100)
T 3b83_A 73 VA 74 (100)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.15 E-value=0.039 Score=44.79 Aligned_cols=83 Identities=18% Similarity=0.270 Sum_probs=51.7
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCC--CCccEEE----EeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCC
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDK--EAESVVE----YGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPAT 124 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~--~~~~~v~----y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 124 (454)
...|..+.+.....+++.|.|..... ....... |...... ...... ...+....++|++|+|+|
T Consensus 19 ~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~------~~~~~~----~~~~~~~~~~i~~L~p~t 88 (132)
T 1x5h_A 19 SAAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRK------SDVTET----LVSGTQLSQLIEGLDRGT 88 (132)
T ss_dssp CCCCEEEEEECCSSSEEEEEEECCCTTTCCSCEEEEBCEEEETTEE------EEEECC----BCCTTCCEEEEECCCSSC
T ss_pred CCCCeeeEEEeCCCCEEEEEEeCCCCcCCCceEeEEEEEEEECCCC------CccEEE----EeCCCccEEEeCCCCCCC
Confidence 34677888877778999999998853 2222333 3332210 000000 022334567889999999
Q ss_pred EEEEEeCc--------cCceeEEECCC
Q 012895 125 TYYYRCGG--------RGPEFSFKMPP 143 (454)
Q Consensus 125 ~Y~Yrv~~--------~s~~~~F~T~p 143 (454)
.|.+||.. .+....|+|++
T Consensus 89 ~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 115 (132)
T 1x5h_A 89 EYNFRVAALTINGTGPATDWLSAETFE 115 (132)
T ss_dssp EEEEECEEEETTEEEEECCCEEEECCS
T ss_pred EEEEEEEEEcCCccCCCCcCEEeEcCc
Confidence 99999863 35667888866
|
| >1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.10 E-value=0.01 Score=49.42 Aligned_cols=32 Identities=16% Similarity=0.264 Sum_probs=26.0
Q ss_pred EEEEECCCCCCCEEEEEeCc--------cCceeEEECCCC
Q 012895 113 HHVKIGPLEPATTYYYRCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 113 ~~~~l~gL~p~t~Y~Yrv~~--------~s~~~~F~T~p~ 144 (454)
..++|+||+|+|.|.+||.. .|....|+|++.
T Consensus 82 ts~~v~~L~P~T~Y~~rV~A~n~~G~G~~S~~~~f~T~~~ 121 (137)
T 1wk0_A 82 TNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSC 121 (137)
T ss_dssp SEEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCCS
T ss_pred cEEEEcCCCCCCEEEEEEEEEeCCCcCCCCCCEEEECCCC
Confidence 45789999999999999953 356778999764
|
| >3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic} | Back alignment and structure |
|---|
Probab=96.09 E-value=0.026 Score=43.65 Aligned_cols=70 Identities=20% Similarity=0.366 Sum_probs=44.5
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEeC
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCG 131 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv~ 131 (454)
+|..+.+.....+++.|+|..+..+ ..-.|+|........... .. ..+-.-.+.|+||+|+|.|.++|.
T Consensus 4 ~P~~l~v~~~t~~Sv~lsW~~p~~~i~~Y~v~y~~~~~~~~~~~----~~------~~~~~t~~~l~gL~P~t~Y~~~V~ 73 (98)
T 3tes_A 4 APKNLVVSEVTEDSLRLSWTAPDAAFDSFMIQYQESEKVGEAIN----LT------VPGSERSYDLTGLKPGTEYTVSIY 73 (98)
T ss_dssp CCEEEEEESCCSSCEEEEEECCTTSCSEEEEEEEETTBCSCCEE----EE------EETTCSEEEECSCCTTCEEEEEEE
T ss_pred CCCceEEEecCCCeEEEEecCCcCccceEEEEEEECCCCCceEE----EE------cCCCcCEEEECCCCCCCEEEEEEE
Confidence 4667777766689999999977532 234677776542111110 00 111233578999999999999986
Q ss_pred c
Q 012895 132 G 132 (454)
Q Consensus 132 ~ 132 (454)
.
T Consensus 74 A 74 (98)
T 3tes_A 74 G 74 (98)
T ss_dssp E
T ss_pred E
Confidence 4
|
| >2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.08 E-value=0.023 Score=44.68 Aligned_cols=71 Identities=18% Similarity=0.189 Sum_probs=44.3
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC-C----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE-A----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~-~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 126 (454)
..|..+.+.....+++.|.|...... . .-.|+|.......+.... . ........+|++|+|++.|
T Consensus 9 ~~P~~l~~~~~~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~~~~w~~~~-~---------~~~~~~~~~v~~L~p~t~Y 78 (110)
T 2yuw_A 9 SPPTLLTVDSVTDTTVTMRWRPPDHIGAAGLDGYVLEYCFEGTEDWIVAN-K---------DLIDKTKFTITGLPTDAKI 78 (110)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSSCCSSCEEEEEEEEEETTCSSEEECC-S---------SCCCSSEEEECSCCTTCEE
T ss_pred CCCCccEEEeccCCeEEEEECCCCCCCCCCccEEEEEEEECCCccceEec-c---------ccCccCEEEECCCCCCCEE
Confidence 46777778777789999999976432 1 134556554332221110 0 1112334678999999999
Q ss_pred EEEeCc
Q 012895 127 YYRCGG 132 (454)
Q Consensus 127 ~Yrv~~ 132 (454)
.|||..
T Consensus 79 ~frV~A 84 (110)
T 2yuw_A 79 FVRVKA 84 (110)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999974
|
| >1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.03 E-value=0.029 Score=44.64 Aligned_cols=81 Identities=19% Similarity=0.243 Sum_probs=48.8
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCCCcc----EEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKEAES----VVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
.|..+.+.....+++.|.|......... .|+|.............. ... ..++|.+|+|++.|.|
T Consensus 20 ~P~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~---------~~~--~~~~v~~L~p~t~Y~f 88 (118)
T 1x3d_A 20 IPNPPRIANRTKNSLTLQWKAPSDNGSKIQNFVLEWDEGKGNGEFCQCYM---------GSQ--KQFKITKLSPAMGCKF 88 (118)
T ss_dssp CCCCCEEEEEETTEEEEECCCCCCCSSCEEEEEEEECTTTSSSCCEEEEE---------ESC--SEEEEESCCTTCEEEE
T ss_pred CCCCcEEeccCCCEEEEEECCCCCCCCcceEEEEEEecCCCCCCeEEeec---------cCC--cEEEeCCCCCCCEEEE
Confidence 4566667666688999999887533333 344543332111111100 111 3457899999999999
Q ss_pred EeCc--------cCceeEEECCCC
Q 012895 129 RCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 129 rv~~--------~s~~~~F~T~p~ 144 (454)
||.. .+....|+|.+.
T Consensus 89 rV~A~n~~G~s~~S~~~~~~T~~~ 112 (118)
T 1x3d_A 89 RLSARNDYGTSGFSEEVLYYTSGC 112 (118)
T ss_dssp ECCEEESSCBCCCCCCEEEECSCC
T ss_pred EEEEEECCCCCCCccCEEEEcCCC
Confidence 9963 245667777653
|
| >2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.00 E-value=0.041 Score=43.75 Aligned_cols=81 Identities=12% Similarity=0.136 Sum_probs=50.2
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEe
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRC 130 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv 130 (454)
..|..+++.....+++.|+|.-+... ..-.|+|........ .. . ..+-...+.|++|+|+|.|.++|
T Consensus 9 ~~P~~l~~~~~t~~sv~lsW~~p~~~i~~Y~v~y~~~~~~~~-~~-------~----v~~~~t~~~l~~L~P~t~Y~~~V 76 (115)
T 2cuh_A 9 DGPTQLRALNLTEGFAVLHWKPPQNPVDTYDIQVTAPGAPPL-QA-------E----TPGSAVDYPLHDLVLHTNYTATV 76 (115)
T ss_dssp SSCEEEECCCCSSSCEEEEEECCSSCCSEEEEEEECSSSCCE-EE-------E----EETTCSEEEECSCCSSSEEEEEE
T ss_pred CCCcceEEEeccCCeEEEEEECCCCCccEEEEEEEcCCCCcE-EE-------E----ECCCccEEEEeCCCCCCEEEEEE
Confidence 45677777666689999999876422 234577765432111 10 0 11123457899999999999998
Q ss_pred Cc-------cCceeEEECCCC
Q 012895 131 GG-------RGPEFSFKMPPA 144 (454)
Q Consensus 131 ~~-------~s~~~~F~T~p~ 144 (454)
.. ......|+|.+.
T Consensus 77 ~A~~~~~~s~~~~~~~~T~~~ 97 (115)
T 2cuh_A 77 RGLRGPNLTSPASITFTTGLE 97 (115)
T ss_dssp EEEETTEECCCEEEEEESCCC
T ss_pred EEEeCCCcCCCEEEEEEeCCC
Confidence 63 123456888653
|
| >3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic} | Back alignment and structure |
|---|
Probab=96.00 E-value=0.047 Score=41.86 Aligned_cols=71 Identities=17% Similarity=0.244 Sum_probs=46.1
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEe
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRC 130 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv 130 (454)
..|..+.+.....+++.|+|..+... ..-.|+|............ . ...-...+.|.+|+|++.|.++|
T Consensus 3 ~~P~~l~v~~~~~~sv~l~W~~p~~~i~~Y~v~y~~~~~~~~~~~~----~------~~~~~~~~~i~~L~p~t~Y~~~V 72 (98)
T 3teu_A 3 DAPTDLQVTNVTDTSITVSWTPPSATITGYRITYTPSNGPGEPKEL----T------VPPSSTSVTITGLTPGVEYVVSV 72 (98)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSSCCSEEEEEEEETTSCSCCEEE----E------ECTTCSEEEECSCCTTCEEEEEE
T ss_pred CCCCceEEEEecCCEEEEEEeCCCCcccEEEEEEEECCCCCceEEE----E------cCCCcCEEEecCCCCCCEEEEEE
Confidence 35778888877789999999987432 2346778754332111110 0 11223457899999999999999
Q ss_pred Cc
Q 012895 131 GG 132 (454)
Q Consensus 131 ~~ 132 (454)
..
T Consensus 73 ~A 74 (98)
T 3teu_A 73 YA 74 (98)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.98 E-value=0.013 Score=46.89 Aligned_cols=83 Identities=19% Similarity=0.269 Sum_probs=50.8
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCCCCcc----EEEEeecCCCC--ceEEEeEeEEEeeeeeecCeEEEEEECCCCCCC
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDKEAES----VVEYGKLPGRY--NTVATGEHTSYQFFFYKSGKIHHVKIGPLEPAT 124 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~~~~~----~v~y~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 124 (454)
...|..+.+.....+++.|.|......... .|+|....... ..... ...-...+.|++|+|+|
T Consensus 19 ~~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p~t 87 (121)
T 2dlh_A 19 SSAPRDVQARMLSSTTILVQWKEPEEPNGQIQGYRVYYTMDPTQHVNNWMKH-----------NVADSQITTIGNLVPQK 87 (121)
T ss_dssp CSCCEEEEECCCSSSBCCEEEECCSCCCSCEEEEEEECCSCTTSCTTTSCCC-----------CCSSCSEECCBSCCSSC
T ss_pred CCCCcccEEEecCCCEEEEEECCCCCCCCcEeEEEEEEEeCCCCCccccEEE-----------ecCCceEEEecCCCCCC
Confidence 346777777766789999999987533222 34444332110 00000 01123356889999999
Q ss_pred EEEEEeCc--------cCceeEEECCCC
Q 012895 125 TYYYRCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 125 ~Y~Yrv~~--------~s~~~~F~T~p~ 144 (454)
.|.+||.. .+....|+|++.
T Consensus 88 ~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 115 (121)
T 2dlh_A 88 TYSVKVLAFTSIGDGPLSSDIQVITQTG 115 (121)
T ss_dssp EEEEEEEEEESSCBCCCCCCEEEECCCC
T ss_pred EEEEEEEEEeCCccCCCCCCEEEECCCC
Confidence 99999953 355678888653
|
| >1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.98 E-value=0.027 Score=45.12 Aligned_cols=72 Identities=28% Similarity=0.338 Sum_probs=45.0
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC----CccEEEEeecC-CCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE----AESVVEYGKLP-GRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 126 (454)
..|..+.+.....+++.|.|.-.... ..-.|+|.... ...+...... ...-...++|++|+|++.|
T Consensus 19 ~~P~~~~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~---------~~~~~~~~~v~~L~p~t~Y 89 (121)
T 1x4z_A 19 EAPDRPTISTASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATSA---------IPPSRLSVEITGLEKGISY 89 (121)
T ss_dssp CCCCCCEEEECCSSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEEEE---------ECTTCCEEEEESCCTTCEE
T ss_pred ccCCCCEEEEccCCEEEEEEECCCCCCCcceEEEEEEEECCCCCceEEeecc---------cCCCcCEEEECCCCCCCEE
Confidence 45666777777788999999844322 23467777654 2222222111 1222345678999999999
Q ss_pred EEEeCc
Q 012895 127 YYRCGG 132 (454)
Q Consensus 127 ~Yrv~~ 132 (454)
.|||..
T Consensus 90 ~frV~A 95 (121)
T 1x4z_A 90 KFRVRA 95 (121)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999964
|
| >3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A | Back alignment and structure |
|---|
Probab=95.95 E-value=0.032 Score=43.32 Aligned_cols=69 Identities=17% Similarity=0.188 Sum_probs=45.0
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCC---CCccEEEEeecCCCC-ceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDK---EAESVVEYGKLPGRY-NTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~---~~~~~v~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
.|..+++.....+++.|.|..+.. ...-.|+|....+.. ..... ...-...++|+||+|+|.|.+
T Consensus 7 ~P~~l~v~~~t~~Sv~l~W~~p~~~~~i~~Y~v~y~~~~~~~~~~~~~-----------v~~~~t~~~l~~L~p~t~Y~~ 75 (101)
T 3k2m_C 7 VPTKLEVVAATPTSLLISWDAPMSSSSVYYYRITYGETGGNSPVQEFT-----------VPYSSSTATISGLSPGVDYTI 75 (101)
T ss_dssp SSCEEEEEEEETTEEEEEECCCCTTSCCCEEEEEEEETTCSSCCEEEE-----------EETTCCEEEECSCCTTCEEEE
T ss_pred CCcceEEeecCCCEEEEEecCCCCCCceeeEEEEEEECCCCCccEEEE-----------cCCCccEEEECCCCCCCEEEE
Confidence 567788877779999999987641 123467777654321 11110 011234678999999999999
Q ss_pred EeCc
Q 012895 129 RCGG 132 (454)
Q Consensus 129 rv~~ 132 (454)
+|..
T Consensus 76 ~V~A 79 (101)
T 3k2m_C 76 TVYA 79 (101)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9864
|
| >2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.95 E-value=0.016 Score=46.56 Aligned_cols=73 Identities=18% Similarity=0.289 Sum_probs=45.8
Q ss_pred cCCCcEEEEEEeCCCCC----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEeCc-----
Q 012895 62 AAKDYIRVSWITDDKEA----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCGG----- 132 (454)
Q Consensus 62 ~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv~~----- 132 (454)
.+.+++.|.|......+ .-.|+|.......+..... .++-...++|.+|+|++.|.+||..
T Consensus 19 ~~~~sv~L~W~p~~dggsPI~~Y~I~yr~~~~~~w~~~~~----------~~~~~~~~~l~~L~p~t~Y~frV~A~N~~G 88 (114)
T 2kbg_A 19 SSGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLEKK----------VQGNKDHIILEHLQWTMGYEVQITAANRLG 88 (114)
T ss_dssp CSTTCEEEEECCCCCSSSCCSEEEEEEEESSCCSCCEEEE----------EETTTCCEEECCCCTTCCEEEEEEEECTTS
T ss_pred cCCCEEEEEEECCCCCCCcccEEEEEEEeCCCCCcEEeEE----------cCCCcCEEEEcCCCCCCEEEEEEEEEeCCc
Confidence 35899999997643222 2478888764433332211 1112234679999999999999964
Q ss_pred --cCceeEEECCCC
Q 012895 133 --RGPEFSFKMPPA 144 (454)
Q Consensus 133 --~s~~~~F~T~p~ 144 (454)
......|+|++.
T Consensus 89 ~s~pS~~~~~T~~~ 102 (114)
T 2kbg_A 89 YSEPTVYEFSMPPK 102 (114)
T ss_dssp CEEEEEEEECCCCC
T ss_pred CcCCcCCEEEcCCC
Confidence 123467888664
|
| >3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A | Back alignment and structure |
|---|
Probab=95.94 E-value=0.047 Score=48.19 Aligned_cols=83 Identities=14% Similarity=0.124 Sum_probs=52.5
Q ss_pred CCCCCeeEEEEecCCCcEEEEEEeCCC--------CCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCC
Q 012895 50 SESDPQQVHISLAAKDYIRVSWITDDK--------EAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLE 121 (454)
Q Consensus 50 ~~~~p~~v~l~~~~~~~~~v~W~t~~~--------~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~ 121 (454)
+...|..+.+.....+++.|+|.-+.. ...-.|+|............. ..-...+.|++|+
T Consensus 4 P~~~P~~l~~~~~~~~si~l~W~~p~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~-----------~~~~~~~~i~~L~ 72 (211)
T 3p4l_A 4 PMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNA-----------NATTLSYLVTGLK 72 (211)
T ss_dssp CCCCCEEEEEEECSSSCEEEEEECTTSCTTCCCCSSCEEEEEEEECC---CCCEEE-----------EESSSEEEECSCC
T ss_pred CCCCCCCEEEEecCCCeEEEEEeCCCCCcccccCCCcEEEEEEEECCCCcceEEEe-----------CCCceEEEecCcC
Confidence 345788888888889999999997431 123567776544321111110 1113356789999
Q ss_pred CCCEEEEEeCc--------cCceeEEECCC
Q 012895 122 PATTYYYRCGG--------RGPEFSFKMPP 143 (454)
Q Consensus 122 p~t~Y~Yrv~~--------~s~~~~F~T~p 143 (454)
|+|.|.++|.. .+....|+|++
T Consensus 73 p~t~Y~~~V~A~n~~g~~~~S~~~~~~t~~ 102 (211)
T 3p4l_A 73 PNTLYEFSVMVTKGRRSSTWSMTAHGTTFE 102 (211)
T ss_dssp TTCEEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred CCCEEEEEEEEEcCCCCCccceeEeeeccc
Confidence 99999999863 24567788854
|
| >2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.94 E-value=0.057 Score=43.15 Aligned_cols=73 Identities=15% Similarity=0.288 Sum_probs=38.2
Q ss_pred EEecCCCcEEEEEEeCCCCCcc----EEEEeecCC-CCceEEEeEeEEEeee--eeecCeEEEEEECCCCCCCEEEEEeC
Q 012895 59 ISLAAKDYIRVSWITDDKEAES----VVEYGKLPG-RYNTVATGEHTSYQFF--FYKSGKIHHVKIGPLEPATTYYYRCG 131 (454)
Q Consensus 59 l~~~~~~~~~v~W~t~~~~~~~----~v~y~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~gL~p~t~Y~Yrv~ 131 (454)
+.....+++.|.|.-+...+.. .|+|...+. ..+.... ....+... ....+-...++|++|+|++.|.+||.
T Consensus 11 v~~~~~~sv~L~W~~P~~~G~pI~~Y~Ve~r~~~~~~~w~~~~-~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~FRV~ 89 (115)
T 2ic2_A 11 VTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTN-DNIPYGKPKWNSELGKSFTASVTDLKPQHTYRFRIL 89 (115)
T ss_dssp EEECC---EEEEEEEECCSSCCEEEEEEEEEECC---CCEEEE-EEEECCSCSCSSSSEEEEEEEECSCCSSEEEEEEEE
T ss_pred eEEEeCCEEEEEEcCCCCCCCCCceEEEEEEECCCCCCceECc-ccccccccccccccCceeEEEeCCCCCCCEEEEEEE
Confidence 5556688999999987544443 455655421 2222221 11110000 00112334678999999999999996
Q ss_pred c
Q 012895 132 G 132 (454)
Q Consensus 132 ~ 132 (454)
.
T Consensus 90 A 90 (115)
T 2ic2_A 90 A 90 (115)
T ss_dssp E
T ss_pred E
Confidence 4
|
| >2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.88 E-value=0.022 Score=44.86 Aligned_cols=80 Identities=13% Similarity=0.110 Sum_probs=47.4
Q ss_pred CCeeEEEE-ecCCCcEEEEEEeCCC-C----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEE
Q 012895 53 DPQQVHIS-LAAKDYIRVSWITDDK-E----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 53 ~p~~v~l~-~~~~~~~~v~W~t~~~-~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 126 (454)
.|..+.+. ....+++.|.|..... . ..-.|+|.......+..... . ....++|++|+|++.|
T Consensus 11 ~P~~~~~~~~~~~~sv~l~W~~P~~~~~~~i~~Y~v~~~~~~~~~~~~~~~----------~--~~~~~~v~~L~p~t~Y 78 (110)
T 2crz_A 11 PCLPPRLQGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVYQ----------G--SEVECTVSSLLPGKTY 78 (110)
T ss_dssp CCCCCEECSCCCSSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCEEEEE----------E--SCSEEEEESCCTTCEE
T ss_pred CCCCceeccccCCCEEEEEeCCCCCCCCceeEEEEEEEEeCCCCceEEEEe----------C--CcEEEEECCcCCCCEE
Confidence 44555553 3347899999976532 1 23467776543332222210 1 1234578999999999
Q ss_pred EEEeCc--------cCceeEEECCCC
Q 012895 127 YYRCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 127 ~Yrv~~--------~s~~~~F~T~p~ 144 (454)
.|||.. .+....++|.+.
T Consensus 79 ~frV~A~n~~G~g~~S~~~~~~T~~~ 104 (110)
T 2crz_A 79 SFRLRAANKMGFGPFSEKCDITTAPG 104 (110)
T ss_dssp EECCEEECSSCBCCCCCCEEEECCCS
T ss_pred EEEEEEEcCCccCCCCCccccccCCC
Confidence 999963 345667777553
|
| >1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.85 E-value=0.026 Score=45.36 Aligned_cols=88 Identities=17% Similarity=0.212 Sum_probs=52.2
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCC---C---CccEEEEeecCCCCc---eEEEeEeEEEeeeeeecCeEEEEEECCCC
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDK---E---AESVVEYGKLPGRYN---TVATGEHTSYQFFFYKSGKIHHVKIGPLE 121 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~---~---~~~~v~y~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~gL~ 121 (454)
...|..+++.....+++.|.|..... . ..-.|+|........ ......... ..+-...+.|++|+
T Consensus 15 ~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~gY~v~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~i~~L~ 88 (125)
T 1uen_A 15 MVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILT------FQGSKTHGMLPGLE 88 (125)
T ss_dssp CCCCSSCEEEEEETTEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCEEEEE------EESSCSEEEEESCC
T ss_pred CCCCceeEEEecCCcEEEEEEcCCCchhcCceEeEEEEEEEECCCCcccccccccceEEE------ecCCccEEEeCCCC
Confidence 34677777777678899999987631 1 123556655443221 000000001 11223467889999
Q ss_pred CCCEEEEEeCc--------cCceeEEECCCC
Q 012895 122 PATTYYYRCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 122 p~t~Y~Yrv~~--------~s~~~~F~T~p~ 144 (454)
|+|.|.+||.. .+....|+|++.
T Consensus 89 p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 119 (125)
T 1uen_A 89 PFSHYTLNVRVVNGKGEGPASPDRVFNTPEG 119 (125)
T ss_dssp SSCEEEEEEEEEESSCEEEECCCEEEECCCC
T ss_pred CCCEEEEEEEEecCCCCCCCCCCEEEECCCC
Confidence 99999999863 245677888653
|
| >2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.85 E-value=0.06 Score=43.31 Aligned_cols=84 Identities=17% Similarity=0.152 Sum_probs=48.9
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCCC-c----cEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKEA-E----SVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~~-~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
.|..+.+.....+ +.|.|.-..... . -.|+|.......+....... . ...-...++|++|+|+|.|.
T Consensus 10 ~P~~~~~~~~~~t-v~l~W~~P~~~~G~pI~~Y~v~~~~~~~~~~~~~~~~~---~----~~~~~~~~~i~~L~p~t~Y~ 81 (122)
T 2e3v_A 10 SPSIDQVEPYSST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDA---K----EASMEGIVTIVGLKPETTYA 81 (122)
T ss_dssp CCEEEEEEECSSC-EEEEEECCCCC--CCEEEEEEEEEETTCCSCEEEEEEH---H----HHHTTTEEEECSCCTTCEEE
T ss_pred CCCccEEEecCCc-EEEEECCCCcCCCCcceEEEEEEEECCCCCcccceeee---e----ecCccceEEeCCCCCCCEEE
Confidence 3777777766666 999999774322 2 34556554432221110000 0 01112356789999999999
Q ss_pred EEeCc--------cCceeEEECCCC
Q 012895 128 YRCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 128 Yrv~~--------~s~~~~F~T~p~ 144 (454)
+||.. .+....|+|.|.
T Consensus 82 ~rV~A~n~~G~g~~S~~~~~~t~~~ 106 (122)
T 2e3v_A 82 VRLAALNGKGLGEISAASEFKTQPV 106 (122)
T ss_dssp EEEEEEETTEECCCCCCEEEECCCC
T ss_pred EEEEEEeCCccCCCcccccccccCC
Confidence 99963 245566777553
|
| >3mpc_A FN3-like protein; fibronectin, FN(III), unknown function; 1.60A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=95.83 E-value=0.051 Score=42.61 Aligned_cols=68 Identities=21% Similarity=0.294 Sum_probs=40.5
Q ss_pred CCCeeEEEEec-CCCcEEEEEEeCCCCCccEEEEeecC--CCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 52 SDPQQVHISLA-AKDYIRVSWITDDKEAESVVEYGKLP--GRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 52 ~~p~~v~l~~~-~~~~~~v~W~t~~~~~~~~v~y~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
.+|..+.+... +.+++.|+|..... ......|.... ..+...+.+.. .. ..+.++|++|++|+|
T Consensus 6 ~aP~~l~a~~~~~~~~v~LsW~~~~~-~~~Y~VyR~~~~~~~~~~i~~~~~--------~t----sy~d~~l~~g~~Y~Y 72 (103)
T 3mpc_A 6 AFPTGLSAVLDSSGNTANLTWNAAPG-ANSYNVKRSTKSGGPYTTIATNIT--------ST----NYTDTGVATGTKYYY 72 (103)
T ss_dssp CCCEEEEEEECTTSCCEEEEEECCTT-CSEEEEEEESSTTCCCEEEEEEEC--------SS----EEEETTCCTTCCCEE
T ss_pred CCCceeEEEEeCCCCEEEEEEECCCC-CCEEEEEEecCCCCCcEEEeecCC--------CC----EEEECCCCCCCEEEE
Confidence 46777777765 36789999998753 34444454432 22233222110 11 123479999999999
Q ss_pred EeCc
Q 012895 129 RCGG 132 (454)
Q Consensus 129 rv~~ 132 (454)
+|..
T Consensus 73 ~V~A 76 (103)
T 3mpc_A 73 VVSA 76 (103)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9963
|
| >2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.81 E-value=0.098 Score=40.80 Aligned_cols=80 Identities=16% Similarity=0.201 Sum_probs=51.0
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEe
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRC 130 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv 130 (454)
..|..+++.....+++.|+|.-.... ..-.|+|....+. .... . ...-...+.|++|+|+|.|.++|
T Consensus 9 ~~P~~l~v~~~~~~sv~lsW~~p~~~i~~Y~i~y~~~~~~-~~~~-------~----~~~~~ts~~l~~L~p~t~Y~~~V 76 (105)
T 2cum_A 9 EAPRDLEAKEVTPRTALLTWTEPPVRPAGYLLSFHTPGGQ-TQEI-------L----LPGGITSHQLLGLFPSTSYNARL 76 (105)
T ss_dssp CCCEEEEEESCCSSCEEEEEECCSSCCSEEEEEEECTTSC-EEEE-------E----ECSSCSEEEECSCCTTCEEEEEE
T ss_pred CCCCceEEEeccCCEEEEEEcCCCCccceEEEEEEeCCCc-eEEE-------E----ECCCccEEEECCCCCCCEEEEEE
Confidence 45777777777789999999876422 2345777654321 1111 0 11223467899999999999998
Q ss_pred Cc-------cCceeEEECCC
Q 012895 131 GG-------RGPEFSFKMPP 143 (454)
Q Consensus 131 ~~-------~s~~~~F~T~p 143 (454)
.. ......|+|..
T Consensus 77 ~A~~~~g~s~~~~~~~~T~~ 96 (105)
T 2cum_A 77 QAMWGQSLLPPVSTSFTTGG 96 (105)
T ss_dssp EEEBTTBCCCCEEEEEECCC
T ss_pred EEEeCCcccCCEEEEEEeCC
Confidence 63 23456788854
|
| >3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D* | Back alignment and structure |
|---|
Probab=95.67 E-value=0.048 Score=43.58 Aligned_cols=71 Identities=20% Similarity=0.374 Sum_probs=46.7
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEe
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRC 130 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv 130 (454)
..|..+.+.....+++.|+|...... ..-.|+|....+..... . .. ..+-...++|+||+|+|.|.++|
T Consensus 5 ~~P~~L~v~~~t~~Sv~lsW~~p~g~i~~Y~v~y~~~~~~~~~~---~---~~----v~~~~ts~~l~gL~P~T~Y~v~V 74 (114)
T 3qwq_B 5 DVPRDLEVVAATPTSLLISWDSGRGSYQYYRITYGETGGNSPVQ---E---FT----VPGPVHTATISGLKPGVDYTITV 74 (114)
T ss_dssp CCCEEEEEEEEETTEEEEEEECCSCCCSEEEEEEEESSCSSCCE---E---EE----EETTCCEEEECSCCTTCEEEEEE
T ss_pred CCCCceEEEecCCCEEEEEEcCCcCcccEEEEEEEECCCCCccE---E---EE----eCCCcCEEEeCCCCCCCEEEEEE
Confidence 46778888877799999999886422 34567787654321110 0 00 11223457899999999999998
Q ss_pred Cc
Q 012895 131 GG 132 (454)
Q Consensus 131 ~~ 132 (454)
..
T Consensus 75 ~A 76 (114)
T 3qwq_B 75 YA 76 (114)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=95.65 E-value=0.054 Score=46.71 Aligned_cols=83 Identities=19% Similarity=0.211 Sum_probs=50.5
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEE
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYR 129 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yr 129 (454)
...|..+.+.....+++.|.|.-.... ..-.|+|............ ..+-...+.|++|+|++.|.++
T Consensus 95 p~~P~~l~~~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p~t~Y~~~ 163 (186)
T 1qr4_A 95 VGSPKGISFSDITENSATVSWTPPRSRVDSYRVSYVPITGGTPNVVT-----------VDGSKTRTKLVKLVPGVDYNVN 163 (186)
T ss_dssp CCCCSCEEEESCCSSCEEEEECCCSSCCSEEEEEEEETTCCCCEEEE-----------EETTCCEEEECSCCSSCEEEEE
T ss_pred CCCCCccEEEEeCCCEEEEEEECCCCcccEEEEEEEeCCCCCceEEE-----------cCCCcCEEEEcCCCCCCEEEEE
Confidence 346677777766789999999876422 3346667655432111111 1112345678999999999999
Q ss_pred eCc-------cCceeEEECCCC
Q 012895 130 CGG-------RGPEFSFKMPPA 144 (454)
Q Consensus 130 v~~-------~s~~~~F~T~p~ 144 (454)
|.. ......|+|+|+
T Consensus 164 V~A~~~~g~s~p~~~~~~T~pd 185 (186)
T 1qr4_A 164 IISVKGFEESEPISGILKTALD 185 (186)
T ss_dssp EEEEETTEECCCEEEEEEC---
T ss_pred EEEEcCCCcCcCEEEEEEecCC
Confidence 963 234557888763
|
| >1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.63 E-value=0.028 Score=44.30 Aligned_cols=71 Identities=17% Similarity=0.214 Sum_probs=44.9
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC-----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE-----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 126 (454)
..|..+.+.....+++.|.|.-.... ..-.|+|.......+.... . ...-...++|++|+|++.|
T Consensus 10 ~~P~~l~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~w~~~~-~---------~~~~~~~~~v~~L~p~t~Y 79 (111)
T 1x5y_A 10 SAPQHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPAN-K---------EPVERCGFTVKDLPTGARI 79 (111)
T ss_dssp CCCEEEEEEEECSSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEESS-S---------SCBSSSEEEEECCCTTCCE
T ss_pred cCCCCCEEEeccCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEcc-c---------cCCcccEEEECCCCCCCEE
Confidence 46777888777789999999976432 2245666654432222110 0 0111334678899999999
Q ss_pred EEEeCc
Q 012895 127 YYRCGG 132 (454)
Q Consensus 127 ~Yrv~~ 132 (454)
.|||..
T Consensus 80 ~frV~A 85 (111)
T 1x5y_A 80 LFRVVG 85 (111)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999974
|
| >2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.63 E-value=0.083 Score=40.95 Aligned_cols=68 Identities=18% Similarity=0.253 Sum_probs=43.2
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCCC----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKEA----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
.|. +.|.....+++.|.|....... .-.|+|............ ...-....+|++|+|++.|.+
T Consensus 10 ~p~-~~v~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p~t~Y~~ 77 (107)
T 2dn7_A 10 RPT-MMISTTAMNTALLQWHPPKELPGELLGYRLQYCRADEARPNTID-----------FGKDDQHFTVTGLHKGTTYIF 77 (107)
T ss_dssp CCE-EEEEECSTTEEEEEEECCSSCSSCCCEEEEEEEETTCSSCEEEE-----------EETTCCEEEEECCCTTCEEEE
T ss_pred CCc-EeEEecCCCEEEEEECCCCCCCCceeEEEEEEEECCCCCCEEEE-----------eCCCccEEEeCCCCCCCEEEE
Confidence 344 6676667889999999874322 346777655433222211 111233567899999999999
Q ss_pred EeCc
Q 012895 129 RCGG 132 (454)
Q Consensus 129 rv~~ 132 (454)
||..
T Consensus 78 ~V~A 81 (107)
T 2dn7_A 78 RLAA 81 (107)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9964
|
| >2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.61 E-value=0.054 Score=43.71 Aligned_cols=72 Identities=17% Similarity=0.259 Sum_probs=46.9
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEE
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYR 129 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yr 129 (454)
...|..+.+.....+++.|.|.-.... ..-.|+|....+....... . ..+-...++|+||+|+|.|.++
T Consensus 29 ~~~P~~l~v~~~t~~Si~lsW~~p~~~i~~Y~V~y~~~~~~~~~~~~----~------v~~~~t~~~l~gL~P~t~Y~~~ 98 (121)
T 2ocf_D 29 SDVPTKLEVVAATPTSLLISWDAPAVTVRYYRITYGETGGNSPVQEF----T------VPGSKSTATISGLKPGVDYTIT 98 (121)
T ss_dssp CCSCEEEEEEEECSSCEEEEEECCSSCCCEEEEEEEETTTCSCBEEE----E------EETTCCEEEECCCCTTCEEEEE
T ss_pred CCCCCccEEEecCCCEEEEEEcCCCCCCcEEEEEEEECCCCCccEEE----E------eCCCcCEEEeCCCCCCCEEEEE
Confidence 457888888888899999999876422 2346667665432111000 0 1112346789999999999999
Q ss_pred eCc
Q 012895 130 CGG 132 (454)
Q Consensus 130 v~~ 132 (454)
|..
T Consensus 99 V~A 101 (121)
T 2ocf_D 99 VYA 101 (121)
T ss_dssp EEE
T ss_pred EEE
Confidence 864
|
| >2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.59 E-value=0.042 Score=43.46 Aligned_cols=82 Identities=21% Similarity=0.231 Sum_probs=51.7
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEE
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYR 129 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yr 129 (454)
...|..+++.....+++.|+|.-.... ..-.|+|....+....... ..+-...+.|++|+|+|.|..+
T Consensus 8 ~~pP~~l~~~~vt~tsi~vsW~pp~~~i~~Y~I~y~~~~~~~~~~~~-----------v~~~~t~~~l~~L~p~T~Y~v~ 76 (108)
T 2ee3_A 8 LAPPRHLGFSDVSHDAARVFWEGAPRPVRLVRVTYVSSEGGHSGQTE-----------APGNATSAMLGPLSSSTTYTVR 76 (108)
T ss_dssp CCCSSCEEEESCCSSCEEEEESCCSSCCSEEEEEEEETTTCCBCCEE-----------EETTCCEEEECSCCSSCEEEEE
T ss_pred CCCCceEEEEEccCCeEEEEeeCCCCCccEEEEEEEeCCCCceeEEE-----------cCCCcCEEEcCCCCCCCEEEEE
Confidence 356777888777799999999765422 3447778766442211111 0111235689999999999999
Q ss_pred eCc-----c--CceeEEECCC
Q 012895 130 CGG-----R--GPEFSFKMPP 143 (454)
Q Consensus 130 v~~-----~--s~~~~F~T~p 143 (454)
|.. . .....|+|.+
T Consensus 77 V~A~~~~g~s~p~~~~~~T~~ 97 (108)
T 2ee3_A 77 VTCLYPGGGSSTLTGRVTTKK 97 (108)
T ss_dssp EEEECTTSCEEEEEEEEECCC
T ss_pred EEEEeCCCcCCCccCEEEeCC
Confidence 853 1 1234688853
|
| >2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.53 E-value=0.032 Score=44.50 Aligned_cols=89 Identities=11% Similarity=0.132 Sum_probs=51.3
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCC-Cce-EEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGR-YNT-VATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
...|..+++.-...+++.|+|...... ..-.|+|....+. ... ...+...... .++-...++|+||+|+|.|.
T Consensus 9 pp~p~~L~v~~~T~~Si~LsW~~p~g~v~~Y~i~y~~~~~~~~e~~~~~~~~~~~~----v~~~~t~~~l~gL~PgT~Y~ 84 (112)
T 2cui_A 9 RPRLSQLSVTDVTTSSLRLNWEAPPGAFDSFLLRFGVPSPSTLEPHPRPLLQRELM----VPGTRHSAVLRDLRSGTLYS 84 (112)
T ss_dssp CCCCCCCEEESCCSSCEEEECCCCTTSCSEEEEEEECCCCSSSCCCSSCCCCEEEE----EETTCCEEEECSCCTTCEEE
T ss_pred CCCCCceEEEeecCCeEEEEECCCCCCccEEEEEEEeCCCCccccccccCcceEEE----cCCCcCEEEeCCCCCCCEEE
Confidence 345667778877799999999876422 3457788755331 000 0000000000 11223467899999999999
Q ss_pred EEeCcc-------CceeEEECCC
Q 012895 128 YRCGGR-------GPEFSFKMPP 143 (454)
Q Consensus 128 Yrv~~~-------s~~~~F~T~p 143 (454)
++|... ......+|.+
T Consensus 85 ~~V~A~~~~~~s~p~~~~~~T~~ 107 (112)
T 2cui_A 85 LTLYGLRGPHKADSIQGTARTLS 107 (112)
T ss_dssp EEEEEECSSSEEEEEEEEEECCC
T ss_pred EEEEEEECCcccCCEEEEEEECC
Confidence 998531 2334566654
|
| >3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.48 E-value=0.029 Score=43.83 Aligned_cols=71 Identities=18% Similarity=0.289 Sum_probs=45.2
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
..|..+++.....+++.|+|.....+ ..-.|+|........... .. ..+-...++|+||+|+|.|.
T Consensus 9 ~~P~~l~v~~~t~~Sv~lsW~~p~~~~g~i~~Y~v~y~~~~~~~~~~~------~~----v~~~~ts~~l~~L~p~t~Y~ 78 (103)
T 3t04_D 9 SVPTKLEVVDATPTSLKISWDAYYSSWQNVKYYRITYGETGGDSPVQE------FT----VPGYYSTATISGLKPGVDYT 78 (103)
T ss_dssp CCCCSCEEEEEETTEEEEECTTTTTTSCCCCEEEEEEEETTCSSCCEE------EE----EETTCCEEEECSCCTTCCEE
T ss_pred CCCceeEEEecCCCEEEEEccCCCCCCCccceEEEEEEECCCCCccEE------EE----cCCCcCEEEeCCCCCCCEEE
Confidence 35667777777799999999876521 223677876532111110 00 11123467899999999999
Q ss_pred EEeCc
Q 012895 128 YRCGG 132 (454)
Q Consensus 128 Yrv~~ 132 (454)
++|..
T Consensus 79 ~~V~A 83 (103)
T 3t04_D 79 ITVYA 83 (103)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99864
|
| >2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.41 E-value=0.026 Score=45.16 Aligned_cols=79 Identities=15% Similarity=0.188 Sum_probs=46.4
Q ss_pred CCeeEEEE-ecCCCcEEEEEEeCCCC-----CccEEEEeecCCC-CceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCE
Q 012895 53 DPQQVHIS-LAAKDYIRVSWITDDKE-----AESVVEYGKLPGR-YNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATT 125 (454)
Q Consensus 53 ~p~~v~l~-~~~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 125 (454)
.|..+.+. ....+++.|.|...... ..-.|+|...... .+.... .+-.....|++|+|++.
T Consensus 20 ~P~~~~~~~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~~~~~~~------------~~~~~~~~v~~L~p~t~ 87 (120)
T 2crm_A 20 IPVKPSVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMIY------------SGATREHLCDRLNPGCF 87 (120)
T ss_dssp CCCCCEEEEEEETTEEEEECCCCTTCCSSCCCEEEEEEEESSSSCCCEEEE------------CSSCSEEEECSCCTTSC
T ss_pred CCCCCEEeeccCCCEEEEEECCCCcCCCCeeeEEEEEEccCCCCcCCEEEE------------eccccEEEECCCCCCCE
Confidence 44444455 34478999999876432 2345666654331 121111 11133467899999999
Q ss_pred EEEEeCc--------cCceeEEECCC
Q 012895 126 YYYRCGG--------RGPEFSFKMPP 143 (454)
Q Consensus 126 Y~Yrv~~--------~s~~~~F~T~p 143 (454)
|.|||.. .+....++|++
T Consensus 88 Y~frV~A~n~~G~s~~S~~~~~~T~~ 113 (120)
T 2crm_A 88 YRLRVYCISDGGQSAVSESLLVQTPA 113 (120)
T ss_dssp EEEEEEEEETTEECCCCCCCCCCCCC
T ss_pred EEEEEEEEcCCccCCCcccEEEEcCC
Confidence 9999964 24455666644
|
| >3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A | Back alignment and structure |
|---|
Probab=95.35 E-value=0.13 Score=46.10 Aligned_cols=82 Identities=16% Similarity=0.168 Sum_probs=53.6
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCC-CCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEE
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDK-EAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYR 129 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yr 129 (454)
...|..+.+.....+++.|+|.-... ...-.|+|.............. .....+.|++|+|+|.|.++
T Consensus 6 ~~~P~~l~~~~~~~~si~l~W~~p~g~i~~Y~v~~~~~~~~~~~~~~~~-----------~~~~~~~i~~L~p~t~Y~~~ 74 (234)
T 3f7q_A 6 LGAPQNPNAKAAGSRKIHFNWLPPSGKPMGYRVKYWIQGDSESEAHLLD-----------SKVPSVELTNLYPYCDYEMK 74 (234)
T ss_dssp CCCCEEEEEEECSSSCEEEEEECCSSCCCEEEEEEEETTSCGGGCEEEE-----------ESSSEEEECSCCTTCEEEEE
T ss_pred CCCCcceEEEEcCCCEEEEEEECCCCccceEEEEEEECCCCccceEEEc-----------CCccEEEECCCCCCCEEEEE
Confidence 45788888888889999999998742 2334677776543222111100 11234678999999999999
Q ss_pred eCc--------cCceeEEECCC
Q 012895 130 CGG--------RGPEFSFKMPP 143 (454)
Q Consensus 130 v~~--------~s~~~~F~T~p 143 (454)
|.. .+....|+|++
T Consensus 75 V~A~n~~G~g~~s~~~~~~T~~ 96 (234)
T 3f7q_A 75 VCAYGAQGEGPYSSLVSCRTHQ 96 (234)
T ss_dssp EEEEETTEECCCCCCEEEECCC
T ss_pred EEEEeCCCcCCCCCeEEEEcCC
Confidence 853 24566788854
|
| >3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene} | Back alignment and structure |
|---|
Probab=95.34 E-value=0.033 Score=42.86 Aligned_cols=70 Identities=20% Similarity=0.294 Sum_probs=45.0
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCCC-ceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGRY-NTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYR 129 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yr 129 (454)
..|..+++.....+++.|+|...... ..-.|+|....+.. ..... ..+-...+.|+||+|+|.|.++
T Consensus 6 ~~P~~l~v~~~t~~Si~lsW~~p~~~i~~Y~v~y~~~~~~~~~~~~~-----------v~~~~t~~~l~~L~p~t~Y~v~ 74 (97)
T 3qht_C 6 SVPTKLEVVAATPTSLLISWDASSSSVSYYRITYGETGGNSPVQEFT-----------VPGSSSTATISGLSPGVDYTIT 74 (97)
T ss_dssp CSSSSCEEEEEETTEEEEECCCCCSSCCEEEEEEEESSSCSCCEEEE-----------EETTCCEEEECSCCTTCEEEEE
T ss_pred CCCCceEEEecCCCEEEEEEeCCCCCCCEEEEEEEECCCCCccEEEE-----------eCCCcCEEEeCCCCCCCEEEEE
Confidence 35666777777789999999876322 23467777654321 11110 1122345789999999999999
Q ss_pred eCc
Q 012895 130 CGG 132 (454)
Q Consensus 130 v~~ 132 (454)
|..
T Consensus 75 V~A 77 (97)
T 3qht_C 75 VYA 77 (97)
T ss_dssp EEE
T ss_pred EEE
Confidence 864
|
| >1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.32 E-value=0.073 Score=42.96 Aligned_cols=79 Identities=14% Similarity=0.168 Sum_probs=47.5
Q ss_pred eEEEEec---CCCcEEEEEEeCCCCC---ccEEEEeecCC---CCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEE
Q 012895 56 QVHISLA---AKDYIRVSWITDDKEA---ESVVEYGKLPG---RYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 56 ~v~l~~~---~~~~~~v~W~t~~~~~---~~~v~y~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 126 (454)
+|++... ..+++.|+|.-....+ .-.|.|..... ....... . ...+-...+.|+||+|+|.|
T Consensus 18 ~v~l~~~~a~sstsi~vsW~~~~~~g~i~gY~V~Y~~~~~~~~~~~~~~~-~--------v~~~~~~~~~l~~L~p~T~Y 88 (120)
T 1ujt_A 18 LVRLHNPVVLTPTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQATSSWQNL-D--------AKVPTERSAVLVNLKKGVTY 88 (120)
T ss_dssp CEEECCCCCCBTTEEEEEEEESSCCSSCCEEEEEEEESSSSSTTTCCEEE-E--------CCCTTCCEEEEESCCSSEEE
T ss_pred EEEeeccEEccCceEEEEEccCCCCCcEeeEEEEEEECCCCCCCCccEEE-E--------ecCCCcCEEEECCCCCCCEE
Confidence 4455433 3789999999642221 23677876643 1111100 0 01222456789999999999
Q ss_pred EEEeCc--------cCceeEEECCC
Q 012895 127 YYRCGG--------RGPEFSFKMPP 143 (454)
Q Consensus 127 ~Yrv~~--------~s~~~~F~T~p 143 (454)
.++|.. .|....|+|+.
T Consensus 89 ~~~V~A~n~~G~Gp~S~~v~~~T~e 113 (120)
T 1ujt_A 89 EIKVRPYFNEFQGMDSESKTVRTTE 113 (120)
T ss_dssp EEEEEEESSSCCCCCCCCEEEEECS
T ss_pred EEEEEEECCCccCCCCCCEEEECCC
Confidence 999853 35667788865
|
| >2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.32 E-value=0.057 Score=43.19 Aligned_cols=70 Identities=14% Similarity=0.175 Sum_probs=45.5
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC-----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE-----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 126 (454)
..|..+.+.....+++.|.|..+... ..-.|+|.......+..... ..-...+.|++|+|++.|
T Consensus 19 ~~P~~l~~~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~w~~~~~-----------~~~~~~~~v~~L~p~t~Y 87 (120)
T 2yux_A 19 GPPQIVKIEDVWGENVALTWTPPKDDGNAAITGYTIQKADKKSMEWFTVIE-----------HYHRTSATITELVIGNEY 87 (120)
T ss_dssp CCCSCEEEEEEETTEEEEEECCCSCCCSSCCCCCCEEEEETTTCCCEEEES-----------SCCSSCCEECCCCSSEEE
T ss_pred CcCCCCEEEEecCCEEEEEEcCCCcCCCCCceEEEEEEEECCCCceEEeee-----------cCCcCEEEECCCCCCCEE
Confidence 46777777766788999999876422 22467777654333322211 111234578999999999
Q ss_pred EEEeCc
Q 012895 127 YYRCGG 132 (454)
Q Consensus 127 ~Yrv~~ 132 (454)
.|||..
T Consensus 88 ~frV~A 93 (120)
T 2yux_A 88 YFRVFS 93 (120)
T ss_dssp EEEECC
T ss_pred EEEEEE
Confidence 999975
|
| >2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.18 E-value=0.016 Score=45.81 Aligned_cols=70 Identities=14% Similarity=0.138 Sum_probs=43.1
Q ss_pred CCCcEEEEEEeCCCC----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEeCc------
Q 012895 63 AKDYIRVSWITDDKE----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCGG------ 132 (454)
Q Consensus 63 ~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv~~------ 132 (454)
..+++.|.|...... ..-.|+|.......+..... +.....+|++|+|++.|.|||..
T Consensus 23 ~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~------------~~~~~~~v~~L~p~t~Y~frV~A~n~~G~ 90 (110)
T 2db8_A 23 HNNSATLSWKQPPLSTVPADGYILELDDGNGGQFREVYV------------GKETMCTVDGLHFNSTYNARVKAFNKTGV 90 (110)
T ss_dssp SSSEEEECCBCCTTCCSCCSEEEEEECCSSSSCCEEEEE------------ESCSCEEEECCCSSSCCEEEEEEECSSCB
T ss_pred CCCEEEEEECCCCCCCCCccEEEEEEEeCCCCceEEEEe------------CCcCEEEECCCCCCCEEEEEEEEEeCCcC
Confidence 368899999877532 23456776543222221110 01123568899999999999863
Q ss_pred --cCceeEEECCCC
Q 012895 133 --RGPEFSFKMPPA 144 (454)
Q Consensus 133 --~s~~~~F~T~p~ 144 (454)
.++...|+|++.
T Consensus 91 s~~S~~~~~~T~~~ 104 (110)
T 2db8_A 91 SPYSKTLVLQTSEG 104 (110)
T ss_dssp CCCCSCEECCCCCC
T ss_pred CCCCCCEEEEcCCC
Confidence 356677888664
|
| >1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.17 E-value=0.028 Score=44.79 Aligned_cols=70 Identities=14% Similarity=0.144 Sum_probs=42.3
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCC-----CCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDK-----EAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~-----~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
.|..+.+.....+++.|.|..... ...-.|+|...+...+..+... ......++|+||+|++.|.
T Consensus 13 ~P~~P~v~~v~~~sv~L~W~~P~~~gg~~i~~Y~Ve~~~~~~~~w~~~~~~----------~~~~~~~~v~~L~p~t~Y~ 82 (112)
T 1bpv_A 13 PPGKPVPLNITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANFS----------NILENEFTVSGLTEDAAYE 82 (112)
T ss_dssp CCCCCEEEEEETTEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCEECCCS----------CCCSSEEEECSCCSSCCEE
T ss_pred CCCCCEEEEeeCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEeecc----------cCccCEEEECCCCCCCEEE
Confidence 344444555568899999985421 1345788876543323221100 1112245789999999999
Q ss_pred EEeCc
Q 012895 128 YRCGG 132 (454)
Q Consensus 128 Yrv~~ 132 (454)
|||..
T Consensus 83 frV~A 87 (112)
T 1bpv_A 83 FRVIA 87 (112)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99964
|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=95.17 E-value=0.13 Score=44.10 Aligned_cols=87 Identities=11% Similarity=0.157 Sum_probs=53.9
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEe
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRC 130 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv 130 (454)
..|..+++.....+++.|.|.-.... ..-.|+|....+. .... . ...-...+.|++|+|++.|.|+|
T Consensus 8 ~~P~~l~~~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~-~~~~-------~----~~~~~~~~~i~~L~p~t~Y~~~V 75 (186)
T 1qr4_A 8 DNPKDLEVSDPTETTLSLRWRRPVAKFDRYRLTYVSPSGK-KNEM-------E----IPVDSTSFILRGLDAGTEYTISL 75 (186)
T ss_dssp CCCEEEEEESCCSSEEEEEEECCSSCCSEEEEEEECTTCC-EEEE-------E----ECTTCSEEEEESCCSSCEEEEEE
T ss_pred cCCCceEEEecCCCEEEEEEeCCCCCccEEEEEEEeCCCC-eeEE-------E----CCCCCCEEEECCCCCCCEEEEEE
Confidence 46778888877789999999976432 3456777643221 1110 0 11122345789999999999999
Q ss_pred Cc-------cCceeEEECCCC-CCCeEE
Q 012895 131 GG-------RGPEFSFKMPPA-NFPIEF 150 (454)
Q Consensus 131 ~~-------~s~~~~F~T~p~-~~~~~f 150 (454)
.. ......++|+|. ...+++
T Consensus 76 ~a~~~~~~s~~~~~~~~t~p~~P~~l~~ 103 (186)
T 1qr4_A 76 VAEKGRHKSKPTTIKGSTVVGSPKGISF 103 (186)
T ss_dssp EEESSSCBCCCEEEEEECCCCCCSCEEE
T ss_pred EEEcCCccCCCEEEEEECCCCCCCccEE
Confidence 63 123466778764 334444
|
| >1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.15 E-value=0.074 Score=42.82 Aligned_cols=73 Identities=15% Similarity=0.148 Sum_probs=45.0
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCCC----ccEEEEeec---CCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCC
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKEA----ESVVEYGKL---PGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPAT 124 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 124 (454)
..|..+.+.....+++.|.|.-..... .-.|+|... ....+...... . .......++|.+|+|++
T Consensus 19 ~~P~~l~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~w~~~~~~----~----~~~~~~~~~v~~L~p~t 90 (124)
T 1wis_A 19 GPPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQL----S----NEPDARSMEVPDLNPFT 90 (124)
T ss_dssp CCCEEEEEESCCSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEEEE----E----SCTTCSEEEECSCCTTS
T ss_pred ccCCCCEEEEecCCEEEEEEECCCCCCCcccEEEEEEEECCCCCCCCCeEeeeE----c----cCCCceEEEeCCCCCCC
Confidence 467778887767899999996553222 346777652 22222221100 0 11223457889999999
Q ss_pred EEEEEeCc
Q 012895 125 TYYYRCGG 132 (454)
Q Consensus 125 ~Y~Yrv~~ 132 (454)
.|.|||..
T Consensus 91 ~Y~frV~A 98 (124)
T 1wis_A 91 CYSFRMRQ 98 (124)
T ss_dssp EECCCCEE
T ss_pred EEEEEEEE
Confidence 99999863
|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=95.06 E-value=0.36 Score=44.31 Aligned_cols=96 Identities=13% Similarity=0.156 Sum_probs=57.6
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCC-CCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEE
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDK-EAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYR 129 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yr 129 (454)
...|..+.+.....+++.|.|..... ...-.|+|....+.......-. ...+-...+.|++|+|++.|.++
T Consensus 105 p~~P~~l~~~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~~~~--------~~~~~~~~~~i~~L~p~t~Y~~~ 176 (283)
T 1tdq_A 105 IDAPKNLRVGSRTATSLDLEWDNSEAEAQEYKVVYSTLAGEQYHEVLVP--------KGIGPTTKTTLTDLVPGTEYGVG 176 (283)
T ss_dssp CCCCEEEEEEEECSSCEEEEEECCSSCCSEEEEEEEETTCCCCEEEEEE--------CCSSSEEEEEECSCCTTCEEEEE
T ss_pred CCCCCceEEEecCCCeEEEEecCCCCCccEEEEEEEeCCCCcceEEECC--------CCCcccceEEEecCCCCCEEEEE
Confidence 45678888877778999999998742 2345677766543222111100 01111566789999999999999
Q ss_pred eCc-------cCceeEEECCCC-CCCeEEEEEe
Q 012895 130 CGG-------RGPEFSFKMPPA-NFPIEFAIVG 154 (454)
Q Consensus 130 v~~-------~s~~~~F~T~p~-~~~~~f~~ig 154 (454)
|.. ......+.|.|. ...+++..++
T Consensus 177 V~A~n~~g~s~~~~~~~~t~~~~P~~l~~~~~~ 209 (283)
T 1tdq_A 177 ISAVMNSKQSIPATMNARTELDSPRDLMVTASS 209 (283)
T ss_dssp EEEEETTEECCCEEEEEECCCCCCEEEEEEEEC
T ss_pred EEEEeCCCCCcceEEEecCCCCCCCccEEeEec
Confidence 964 123345666553 2334444433
|
| >2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.98 E-value=0.045 Score=43.46 Aligned_cols=71 Identities=24% Similarity=0.306 Sum_probs=43.4
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCCC---ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKEA---ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
..|..+++.....+++.|.|......+ .-.|+|.......+.... ....-...+.|++|+|++.|.+
T Consensus 19 ~~P~~l~~~~~~~~sv~l~W~~p~~~g~i~~Y~v~~~~~~~~~~~~~~----------~~~~~~~~~~i~~L~p~t~Y~~ 88 (118)
T 2yrz_A 19 DTPTRLVFSALGPTSLRVSWQEPRCERPLQGYSVEYQLLNGGELHRLN----------IPNPAQTSVVVEDLLPNHSYVF 88 (118)
T ss_dssp CCCCCCEECCCBTTEEEEECCCCCCSSCEEEEEEEEEBSSSCCEEEEE----------ESCTTCCEEEEESCCTTCEEEE
T ss_pred CCCCceEEEeCCCCEEEEEeCCCCCCCCccEEEEEEEECCCCceEEEE----------cCCCCcCEEEeCCCCCCCEEEE
Confidence 356666666666899999998775432 234555543332111110 0112234567899999999999
Q ss_pred EeCc
Q 012895 129 RCGG 132 (454)
Q Consensus 129 rv~~ 132 (454)
||..
T Consensus 89 ~V~A 92 (118)
T 2yrz_A 89 RVRA 92 (118)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9964
|
| >1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.97 E-value=0.041 Score=44.52 Aligned_cols=31 Identities=26% Similarity=0.301 Sum_probs=24.5
Q ss_pred EEEECCCCCCCEEEEEeCc--------cCceeEEECCCC
Q 012895 114 HVKIGPLEPATTYYYRCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 114 ~~~l~gL~p~t~Y~Yrv~~--------~s~~~~F~T~p~ 144 (454)
.++|++|+|+|.|.|||.. .+....++|.++
T Consensus 76 ~~~v~gL~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 114 (120)
T 1wfu_A 76 RHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRE 114 (120)
T ss_dssp EEEEESCCTTCEEEEEEEEECSSSCEEECCCEEEECCCC
T ss_pred EEEECCCCCCCEEEEEEEEECCCCCCCCCccEeeEcCCC
Confidence 3678999999999999964 256677888764
|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=94.96 E-value=0.21 Score=45.90 Aligned_cols=94 Identities=13% Similarity=0.222 Sum_probs=57.6
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCC-CCCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEe
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDD-KEAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRC 130 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~-~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv 130 (454)
..|..+.+.....+++.|.|.-.. ....-.|+|.......... ... ...-...+.|++|+|++.|.++|
T Consensus 16 ~~P~~l~~~~~~~~sv~l~W~~~~~~~~~Y~v~~~~~~~~~~~~------~~~----~~~~~~~~~i~~L~p~t~Y~~~V 85 (283)
T 1tdq_A 16 DGPTQILVRDVSDTVAFVEWTPPRAKVDFILLKYGLVGGEGGKT------TFR----LQPPLSQYSVQALRPGSRYEVSI 85 (283)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSSCCSEEEEEEEESSSSCCCE------EEE----ECTTCSEEEECSCCTTCEEEEEE
T ss_pred CCCcEEEEEecCCCeEEEEEECCCCceeEEEEEEEEecCCCCcE------EEE----eCCCCCEEEecCCCCCCEEEEEE
Confidence 467788888777899999999875 2234567775433211110 000 11223456789999999999999
Q ss_pred Cc-------cCceeEEECCCC-CCCeEEEEEec
Q 012895 131 GG-------RGPEFSFKMPPA-NFPIEFAIVGD 155 (454)
Q Consensus 131 ~~-------~s~~~~F~T~p~-~~~~~f~~igD 155 (454)
.. ......|.|+|. ...+++..+++
T Consensus 86 ~a~~~~g~s~~~~~~~~t~p~~P~~l~~~~~~~ 118 (283)
T 1tdq_A 86 SAVRGTNESDASSTQFTTEIDAPKNLRVGSRTA 118 (283)
T ss_dssp EEEETTEECCCEEEEEECCCCCCEEEEEEEECS
T ss_pred EEECCCCCCCCeeEEEECCCCCCCceEEEecCC
Confidence 64 123456888774 33344444443
|
| >2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A | Back alignment and structure |
|---|
Probab=94.96 E-value=0.056 Score=47.52 Aligned_cols=72 Identities=17% Similarity=0.212 Sum_probs=45.8
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEE
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYR 129 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yr 129 (454)
...|..+++.....+++.|+|..+... ..-.|.|............ . .++-...++|+||+|+|.|.++
T Consensus 104 ~~~P~~l~v~~~t~~si~l~W~~p~~~i~~Y~v~y~~~~~~~~~~~~----~------v~~~~t~~~l~gL~p~t~Y~~~ 173 (195)
T 2qbw_A 104 SSVPTNLEVVAATPTSLLISWDASYYGVSYYRITYGETGGNSPVQEF----T------VPYSSSTATISGLKPGVDYTIT 173 (195)
T ss_dssp CCSSCCCEEEEEETTEEEEECCCCCSSCSEEEEEEEETTCCSCCEEE----E------EETTCSEEEECSCCTTCEEEEE
T ss_pred CCCCcccEEEeCCCCEEEEEEeCCCCCccEEEEEEEECCCCCcceEE----E------eCCCCCEEEeCCCCCCCEEEEE
Confidence 356777888777799999999766422 2346777655432111100 0 1112345789999999999999
Q ss_pred eCc
Q 012895 130 CGG 132 (454)
Q Consensus 130 v~~ 132 (454)
|..
T Consensus 174 V~A 176 (195)
T 2qbw_A 174 VYA 176 (195)
T ss_dssp EEE
T ss_pred EEE
Confidence 863
|
| >1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.93 E-value=0.13 Score=40.60 Aligned_cols=81 Identities=12% Similarity=0.056 Sum_probs=50.1
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
..|..+.+.. ..+++.+.|.-+... ..-.|+|... +..+...... ...-..+..|.+|+|++.|.
T Consensus 9 ~pP~~l~v~~-~~~sv~L~W~pP~~~~~~I~gY~vey~~~-~~~W~~~~~~---------~~~~~t~~~v~~L~pg~~Y~ 77 (108)
T 1v5j_A 9 SPPRGLVAVR-TPRGVLLHWDPPELVPKRLDGYVLEGRQG-SQGWEVLDPA---------VAGTETELLVPGLIKDVLYE 77 (108)
T ss_dssp CCCEEEEEEE-CSSSEEEEEECCSCCSSCCCBEEEEEEET-TCCCEEEEEE---------ECSSCCEEECCCCCTTSCEE
T ss_pred CCCcceEEEE-eCCEEEEEECCCCCCCCCCcEEEEEEEeC-CCCcEEeeee---------cCCCcCEEEeCCCCCCCEEE
Confidence 5677777765 367899999988642 2346788773 2223322211 11223456689999999999
Q ss_pred EEeCc--------cCceeEEECCC
Q 012895 128 YRCGG--------RGPEFSFKMPP 143 (454)
Q Consensus 128 Yrv~~--------~s~~~~F~T~p 143 (454)
+||.. .|+...++|..
T Consensus 78 FRV~A~n~~G~s~pS~~~~v~T~~ 101 (108)
T 1v5j_A 78 FRLVAFAGSFVSDPSNTANVSTSG 101 (108)
T ss_dssp CCBEEEETTEEEEECSCCCCCCSS
T ss_pred EEEEEEcCCCCcCCCCCEEEEeCC
Confidence 99964 24455555543
|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A | Back alignment and structure |
|---|
Probab=94.93 E-value=0.25 Score=45.69 Aligned_cols=93 Identities=17% Similarity=0.155 Sum_probs=57.9
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCC-CCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEe
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDK-EAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRC 130 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv 130 (454)
..|..+.+...+.+++.|.|..... ...-.|+|....+....... ...-...+.|++|+|++.|.++|
T Consensus 114 ~~P~~l~~~~~~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p~t~Y~~~V 182 (290)
T 3r8q_A 114 SPPRRARVTDATETTITISWRTKTETITGFQVDAVPANGQTPIQRT-----------IKPDVRSYTITGLQPGTDYKIYL 182 (290)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSCCCCEEEEEEEESSSCCCEEEE-----------ECTTCSEEEECSCCTTCEEEEEE
T ss_pred CCCceeEEEEcCCCeEEEEEeCCCCcccEEEEEEEECCCCcceEEe-----------cCCCccEEEECCCCCCCEEEEEE
Confidence 5788888887778999999998753 23456667655432211111 11123346789999999999999
Q ss_pred Cc-------cCceeEEECCCC-CCCeEEEEEec
Q 012895 131 GG-------RGPEFSFKMPPA-NFPIEFAIVGD 155 (454)
Q Consensus 131 ~~-------~s~~~~F~T~p~-~~~~~f~~igD 155 (454)
.. ......+.|+|. ...+++..+++
T Consensus 183 ~A~n~~g~s~~~~~~~~t~p~~P~~l~~~~~~~ 215 (290)
T 3r8q_A 183 YTLNDNARSSPVVIDASTAIDAPSNLRFLATTP 215 (290)
T ss_dssp EEEETTEECCCEEEEEECCCCCCEEEEEEEEET
T ss_pred EEEeCCcccCCEEEEecCCCCCCCccEEEeeCC
Confidence 63 123455677664 33455544443
|
| >2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A | Back alignment and structure |
|---|
Probab=94.90 E-value=0.094 Score=46.17 Aligned_cols=80 Identities=18% Similarity=0.159 Sum_probs=48.5
Q ss_pred CCeeEEEEecCCCcEEEEEEeCC--C---CCccEEEEeecCCC-CceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEE
Q 012895 53 DPQQVHISLAAKDYIRVSWITDD--K---EAESVVEYGKLPGR-YNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~--~---~~~~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 126 (454)
.|..+.+.....+++.|.|.... . ...-.|+|...... ......- ...-....+|++|+|++.|
T Consensus 118 ~P~~~~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~----------~~~~~~~~~i~~L~p~t~Y 187 (214)
T 2ibg_A 118 VPELLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKATI----------EGAHARSFKIAPLETATMY 187 (214)
T ss_dssp CCEECCCBCCSSSCEEEEEECCTTCCGGGCCEEEEEEEETTCCSCCEEEEE----------ECTTCCEEEECSCCTTCEE
T ss_pred CCcccEEEEccCCeEEEEEeCCCccCCCCcceEEEEEEECCCCcceEEeec----------cCCcceEEEeCCCCCCCEE
Confidence 46666655556889999999873 1 12345667655431 1111110 1111234578999999999
Q ss_pred EEEeCc--------cCceeEEECC
Q 012895 127 YYRCGG--------RGPEFSFKMP 142 (454)
Q Consensus 127 ~Yrv~~--------~s~~~~F~T~ 142 (454)
.|||.. .+....++|.
T Consensus 188 ~~~V~A~n~~G~g~~S~~~~~~T~ 211 (214)
T 2ibg_A 188 EFKLQSFSAASASEFSALKQGRTQ 211 (214)
T ss_dssp EEEEEEECSSCBCCCCCCEEEECC
T ss_pred EEEEEEEcCCccCCCcceEeeEec
Confidence 999963 2456677774
|
| >1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.86 E-value=0.25 Score=39.61 Aligned_cols=83 Identities=13% Similarity=0.191 Sum_probs=47.9
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCCCCc----cEEEEeecCCC-CceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCE
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDKEAE----SVVEYGKLPGR-YNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATT 125 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 125 (454)
...|..+.+.....+++.|.|.-...... -.|+|...... ........ . ...... .+.+|+|++.
T Consensus 17 P~~P~~~~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~w~~~~~---~-----~~~~~~--~i~~L~p~t~ 86 (127)
T 1uey_A 17 PNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE---V-----SGTQTT--AQLNLSPYVN 86 (127)
T ss_dssp CCCCEEEEEECCSSSCEEEEEECCCCCSSCEEEEEEEEEBTTTCTTCEEEEEE---E-----ESSCCE--EEECCCTTCE
T ss_pred CcCCCCcEEEEccCCEEEEEEECCCCCCCCceEEEEEEEECCCCCCccEEEee---e-----CCCceE--EEecCCCCCE
Confidence 34778888877778999999996643332 34556543211 11111111 0 111122 3569999999
Q ss_pred EEEEeCc--------cCce-eEEECCC
Q 012895 126 YYYRCGG--------RGPE-FSFKMPP 143 (454)
Q Consensus 126 Y~Yrv~~--------~s~~-~~F~T~p 143 (454)
|.|||.. .+.. ..|+|++
T Consensus 87 Y~frV~A~n~~G~s~~S~~~~~~~T~~ 113 (127)
T 1uey_A 87 YSFRVMAVNSIGKSLPSEASEQYLTKA 113 (127)
T ss_dssp ECCEEEEEESSCBCCCCSCCCCEECCC
T ss_pred EEEEEEEEeCCccCCccccccceEcCC
Confidence 9999963 2333 4677754
|
| >3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.84 E-value=0.18 Score=43.36 Aligned_cols=70 Identities=16% Similarity=0.292 Sum_probs=45.8
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC-----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE-----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 126 (454)
..|..+++.....+++.|.|...... ..-.|+|.............. .-...+.|++|+|++.|
T Consensus 7 ~~P~~l~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-----------~~~~~~~~~~L~p~t~Y 75 (197)
T 3lpw_A 7 GPPQDLKVKEVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVATN-----------CHKTSWKVDQLQEGCSY 75 (197)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSCCTTSCCCEEEEEEEETTCSSCEEEEEE-----------ECSSEEEECCCCTTCEE
T ss_pred CCCCCcEEEEecCCEEEEEEcCCccCCCCcccEEEEEEEECCCCccEEeecC-----------CCccEEEEcCCCCCCEE
Confidence 46777888777789999999987321 234677766543332222111 01234678999999999
Q ss_pred EEEeCc
Q 012895 127 YYRCGG 132 (454)
Q Consensus 127 ~Yrv~~ 132 (454)
.|||..
T Consensus 76 ~~~V~a 81 (197)
T 3lpw_A 76 YFRVLA 81 (197)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999963
|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A | Back alignment and structure |
|---|
Probab=94.65 E-value=0.31 Score=45.07 Aligned_cols=85 Identities=9% Similarity=0.023 Sum_probs=54.2
Q ss_pred CCCCCCeeEEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 49 RSESDPQQVHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 49 ~~~~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
.....|..+.+.....+++.|.|...+.. ..-.|+|............ . ...-...+.|++|+|++.|.
T Consensus 19 ~~p~~P~~l~~~~~~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~~------~----~~~~~~~~~i~~L~p~t~Y~ 88 (290)
T 3r8q_A 19 PAIPAPTDLKFTQVTPTSLSAQWTPPNVQLTGYRVRVTPKEKTGPMKEI------N----LAPDSSSVVVSGLMVATKYE 88 (290)
T ss_dssp -CCCCCEEEEEEEECSSCEEEEEECCSSCCCEEEEEEEESSSSSCCEEE------E----ECTTCCEEEECSCCSSCEEE
T ss_pred CCCCCCCceEEEECCCCEEEEEEeCCCCCeeEEEEEEEeCCCCCceEEE------E----cCCCccEEEeCCCCCCCEEE
Confidence 34567888888888899999999987532 3356777665432211111 0 11223457789999999999
Q ss_pred EEeCcc-------CceeEEECCC
Q 012895 128 YRCGGR-------GPEFSFKMPP 143 (454)
Q Consensus 128 Yrv~~~-------s~~~~F~T~p 143 (454)
|+|... .....|+|.+
T Consensus 89 ~~V~a~~~~g~s~~s~~~~~t~~ 111 (290)
T 3r8q_A 89 VSVYALKDTLTSRPAQGVVTTLE 111 (290)
T ss_dssp EEEEEEETTEECCCEEEEEECCC
T ss_pred EEEEEEeCCCCCCCcceeEecCC
Confidence 998631 1234577754
|
| >1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.62 E-value=0.095 Score=41.65 Aligned_cols=70 Identities=20% Similarity=0.278 Sum_probs=40.6
Q ss_pred CCeeE--EEEecCCCcEEEEEEeCCCCCc----cEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEE
Q 012895 53 DPQQV--HISLAAKDYIRVSWITDDKEAE----SVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 53 ~p~~v--~l~~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 126 (454)
.|..+ .+.....+++.|.|.-...... -.|+|.... ..+...... ...-...++|++|+|++.|
T Consensus 20 ~P~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~-~~~~~~~~~---------~~~~~~~~~v~~L~p~t~Y 89 (121)
T 1wf5_A 20 APEHPVATLSTVERRAINLTWTKPFDGNSPLIRYILEMSENN-APWTVLLAS---------VDPKATSVTVKGLVPARSY 89 (121)
T ss_dssp CCSSCEEEECSSSTTEEEEECCCCCCCSSCEEEEEEEEECTT-CCCEEEESS---------CCTTCCEEEEESCCTTCEE
T ss_pred cCCCcceeeEeccCCEEEEEEcCCCCCCCcceEEEEEEEcCC-CCceEeEcc---------cCCCccEEEECCcCCCCEE
Confidence 45555 4544557899999987643332 344554442 111111000 1122345788999999999
Q ss_pred EEEeCc
Q 012895 127 YYRCGG 132 (454)
Q Consensus 127 ~Yrv~~ 132 (454)
.|||..
T Consensus 90 ~frV~A 95 (121)
T 1wf5_A 90 QFRLCA 95 (121)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999964
|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A | Back alignment and structure |
|---|
Probab=94.60 E-value=0.3 Score=42.69 Aligned_cols=70 Identities=10% Similarity=0.084 Sum_probs=45.1
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCC--CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEe
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKE--AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRC 130 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv 130 (454)
.|..+.+.....+++.|.|.-.... ..-.|+|...+........ . ...-.....|++|+|++.|.++|
T Consensus 25 ~P~~l~~~~~~~~sv~lsW~~p~~~~i~~Y~v~~~~~~~~~~~~~~-~---------~~~~~~~~~i~~L~p~t~Y~~~V 94 (203)
T 2gee_A 25 QPTDLSFVDITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFED-F---------VDSSVGYYTVTGLEPGIDYDISV 94 (203)
T ss_dssp CCEEEEEECCTTTCEEEEEECCSSSSCCEEEEEEEESSSSSCCEEE-E---------EETTCCEEEECSCCTTCEEEEEE
T ss_pred CCCccEEEecCCCEEEEEecCCCCCCccEEEEEEEECCCCCCceeE-E---------cCCCccEEEeCCCCCCCEEEEEE
Confidence 5777777777789999999987531 2346777665433221111 0 01122356789999999999999
Q ss_pred Cc
Q 012895 131 GG 132 (454)
Q Consensus 131 ~~ 132 (454)
..
T Consensus 95 ~a 96 (203)
T 2gee_A 95 YT 96 (203)
T ss_dssp EE
T ss_pred EE
Confidence 63
|
| >1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.58 E-value=0.074 Score=40.34 Aligned_cols=70 Identities=16% Similarity=0.313 Sum_probs=43.6
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEeC
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCG 131 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv~ 131 (454)
.|..+++.....+++.|+|.-.... ..-.|+|....+... . ... ...+-...++|+||+|||.|.++|.
T Consensus 4 ~P~~l~~~~~~~~si~lsW~~p~~~i~~Y~v~y~~~~~~~~-----~--~~~---~~~~~~~~~~l~~L~p~t~Y~~~V~ 73 (94)
T 1j8k_A 4 RPKGLAFTDVDVDSIKIAWESPQGQVSRYRVTYSSPEDGIH-----E--LFP---APDGEEDTAELQGLRPGSEYTVSVV 73 (94)
T ss_dssp CCCCCEEEEEETTEEEEECCCCSSCCSCEEEEEEETTTEEE-----E--ECC---CCCSSCCEEEECSCCCCSEEEEEEE
T ss_pred CCCccEEEeecCCEEEEEEcCCCCCcceEEEEEEeCCCCCc-----e--EEe---cCCCCccEEEeCCCCCCCEEEEEEE
Confidence 4667777776789999999665321 234666765432100 0 000 0112345678999999999999986
Q ss_pred c
Q 012895 132 G 132 (454)
Q Consensus 132 ~ 132 (454)
.
T Consensus 74 A 74 (94)
T 1j8k_A 74 A 74 (94)
T ss_dssp E
T ss_pred E
Confidence 4
|
| >2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.57 E-value=0.21 Score=39.56 Aligned_cols=68 Identities=19% Similarity=0.322 Sum_probs=43.7
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
..|..+++.... +++.|+|.-...+ ..-.|+|..... ...... ...-....+|++|+|++.|.
T Consensus 19 ~~P~~l~~~~~~-~sv~l~W~~P~~~ng~i~gY~i~y~~~~~-~~~~~~-----------~~~~~~~~~l~~L~p~t~Y~ 85 (116)
T 2edb_A 19 DQPSSLHVRPQT-NCIIMSWTPPLNPNIVVRGYIIGYGVGSP-YAETVR-----------VDSKQRYYSIERLESSSHYV 85 (116)
T ss_dssp CCCSCEEEEECS-SCEEEEECCCSCTTBCCCEEEEEEEESST-TSEEEE-----------EETTCCEEEECSCCSSSBEE
T ss_pred CCCCCeEEEECC-CEEEEEEcCCCCCCCceeEEEEEEEeCCC-CeEEEE-----------eCCCeeEEEeCCCCCCCEEE
Confidence 377888888777 9999999877433 124566764221 111110 11123456789999999999
Q ss_pred EEeCc
Q 012895 128 YRCGG 132 (454)
Q Consensus 128 Yrv~~ 132 (454)
+||..
T Consensus 86 ~~V~A 90 (116)
T 2edb_A 86 ISLKA 90 (116)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99964
|
| >3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A | Back alignment and structure |
|---|
Probab=94.52 E-value=0.13 Score=47.70 Aligned_cols=78 Identities=22% Similarity=0.322 Sum_probs=48.4
Q ss_pred CeeEEEEecCCCcEEEEEEeC--C----CCCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 54 PQQVHISLAAKDYIRVSWITD--D----KEAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 54 p~~v~l~~~~~~~~~v~W~t~--~----~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
|.++.+.....+++.|+|.-. + ....-.|+|....+.. .... ...-....+|++|+|++.|.
T Consensus 200 ~p~~~~~~~~~~sv~l~W~~~~~~~~~g~i~~Y~v~~~~~~~~~-~~~~-----------~~~~~~~~~~~~L~p~t~Y~ 267 (290)
T 3l5i_A 200 GPTVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGNE-TAVN-----------VDSSHTEYTLSSLTSDTLYM 267 (290)
T ss_dssp CCCEEEEEECSSCEEEEECCCCHHHHSSCCCEEEEEEEETTSCC-EEEE-----------EETTCSEEEECSCCTTCEEE
T ss_pred CCeeeEeeccCCEEEEEEcCCChhccCCEEEEEEEEEEeCCCCe-EEEE-----------eCCCceEEEeCCCCCCCEEE
Confidence 336666666688999999732 1 1123456676654321 1110 11123356799999999999
Q ss_pred EEeCc-------cCceeEEECCC
Q 012895 128 YRCGG-------RGPEFSFKMPP 143 (454)
Q Consensus 128 Yrv~~-------~s~~~~F~T~p 143 (454)
++|.. .+....|+|+|
T Consensus 268 ~~V~A~n~~Gg~~s~~~~~~T~~ 290 (290)
T 3l5i_A 268 VRMAAYTDEGGKDGPEFTFTTPK 290 (290)
T ss_dssp EEEEEEETTEEEECCCEEEECCC
T ss_pred EEEEEEeCCCCCCCCceEeecCC
Confidence 99953 35677888875
|
| >3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A | Back alignment and structure |
|---|
Probab=94.43 E-value=0.31 Score=42.83 Aligned_cols=82 Identities=15% Similarity=0.253 Sum_probs=52.7
Q ss_pred CCCCeeEEEEecC----CCcEEEEEEeCCCCC--------ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEEC
Q 012895 51 ESDPQQVHISLAA----KDYIRVSWITDDKEA--------ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIG 118 (454)
Q Consensus 51 ~~~p~~v~l~~~~----~~~~~v~W~t~~~~~--------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 118 (454)
...|..+.+...+ .+++.|.|....... .-.|+|....+..+.... ........|.
T Consensus 103 p~pP~~l~~~~~~~~~~~~~l~l~W~~p~~~~~~~g~~~~~Y~v~y~~~~~~~~~~~~------------~~~~~~~~l~ 170 (210)
T 3n06_B 103 PDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEIHF------------AGQQTEFKIL 170 (210)
T ss_dssp CCCCEEEEEEEECCSSSCCEEEEEEECCTTCCCTTSSCCEEEEEEEECTTCSSCEEEE------------EETCSEEEEC
T ss_pred cCCCceEEEEEecCcCCCceEEEEcCCCCCccccCCeEEEEEEEEEecCCCCCCEEEe------------ccCceEEEEe
Confidence 4577778887643 588999999875321 235667655432222111 0112356789
Q ss_pred CCCCCCEEEEEeCc---------cCceeEEECCCC
Q 012895 119 PLEPATTYYYRCGG---------RGPEFSFKMPPA 144 (454)
Q Consensus 119 gL~p~t~Y~Yrv~~---------~s~~~~F~T~p~ 144 (454)
+|+|++.|.+||.. +|....|+||..
T Consensus 171 ~L~p~t~Y~v~Vra~~~~g~wS~wS~~~~~~Tp~~ 205 (210)
T 3n06_B 171 SLHPGQKYLVQVRCKPDHGYWSAWSPATFIQIPSD 205 (210)
T ss_dssp CCCTTCEEEEEEEEEESSSCCCCCCCCEEEECCTT
T ss_pred ccCCCCEEEEEEEEecCCCcccCCCCceeEECcCC
Confidence 99999999999852 466788999653
|
| >2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A | Back alignment and structure |
|---|
Probab=94.41 E-value=0.17 Score=44.31 Aligned_cols=84 Identities=18% Similarity=0.134 Sum_probs=50.2
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCC-----CCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDK-----EAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~-----~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 126 (454)
..|..+.+..... ++.|.|..... ...-.|+|.......+....-.. ...+......|++|+|+|.|
T Consensus 10 ~~P~~~~~~~~~~-s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~~~~~~~~~-------~~~~~~~~~~i~~L~p~t~Y 81 (209)
T 2vkw_A 10 SSPSIDQVEPYSS-TAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDA-------KEASMEGIVTIVGLKPETTY 81 (209)
T ss_dssp CCCEEEEEEECSS-CEEEEEECCSCCCSSCCCEEEEEEEESSCCCCEEEEEEH-------HHHHHHSEEEECCCCTTCEE
T ss_pred cCCcccEeeeccC-eEEEEEcCCCcCCCcceeEEEEEEeeCCCCCceEeEeec-------cCCCccceEEeCCCCCCCeE
Confidence 3577777766655 68999998742 12345777765433222211100 00112235678999999999
Q ss_pred EEEeCc--------cCceeEEECCC
Q 012895 127 YYRCGG--------RGPEFSFKMPP 143 (454)
Q Consensus 127 ~Yrv~~--------~s~~~~F~T~p 143 (454)
.|||.. .+....|+|.+
T Consensus 82 ~~~V~A~n~~G~~~~s~~~~~~T~~ 106 (209)
T 2vkw_A 82 AVRLAALNGKGLGEISAASEFKTQP 106 (209)
T ss_dssp EEEEEEEETTEECCCCCCEEEECCC
T ss_pred EEEEEEEcCCcccCCcccccccccC
Confidence 999963 24456678754
|
| >1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.30 E-value=0.096 Score=41.32 Aligned_cols=71 Identities=14% Similarity=0.211 Sum_probs=42.5
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCCC----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKEA----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
..|..+.+.....+++.|.|....... .-.|+|.............. .. ....+.|++|+|++.|.
T Consensus 17 ~~P~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~--------~~--~~~~~~i~~L~p~t~Y~ 86 (117)
T 1uem_A 17 GPPSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVAN--------HV--KTTLYTVRGLRPNTIYL 86 (117)
T ss_dssp BCCCCCEEEEECSSCEEEECCCCBCSSSCCCEEEEEEEETTTEEEEEEEEE--------EE--CSSEEEECSCCTTCEEE
T ss_pred cCCCCCEEEEecCCEEEEEEeCCCCCCcCceEEEEEEEECCCCCceeEccc--------cc--CcCEEEECCCCCCCEEE
Confidence 356677777667889999998764222 24566654421111111000 01 12246789999999999
Q ss_pred EEeCc
Q 012895 128 YRCGG 132 (454)
Q Consensus 128 Yrv~~ 132 (454)
|||..
T Consensus 87 frV~A 91 (117)
T 1uem_A 87 FMVRA 91 (117)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99964
|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A | Back alignment and structure |
|---|
Probab=94.20 E-value=0.26 Score=43.17 Aligned_cols=70 Identities=19% Similarity=0.293 Sum_probs=46.0
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCC--CCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEe
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDK--EAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRC 130 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv 130 (454)
.|..+.+...+.+++.|.|..... ...-.|+|....+....... . ...-...+.|+||+|+|.|.++|
T Consensus 116 ~P~~l~~~~~~~~sv~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~~------~----~~~~~~~~~i~~L~p~t~Y~~~V 185 (203)
T 2gee_A 116 PPTDLRFTNIGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVAEL------S----ISPSDNAVVLTNLLPGTEYVVSV 185 (203)
T ss_dssp CCEEEEEEEEETTEEEEEEECCSSCCCSEEEEEEEETTCGGGCEEE------E----ECTTCCEEEECSCCTTCEEEEEE
T ss_pred CCCceEEEEcCCCEEEEEEcCCCCCCccEEEEEEEECCCCCccEEE------E----cCCCcCEEEECCCCCCCEEEEEE
Confidence 678888877778999999998742 23456777664332111100 0 12224456789999999999999
Q ss_pred Cc
Q 012895 131 GG 132 (454)
Q Consensus 131 ~~ 132 (454)
..
T Consensus 186 ~A 187 (203)
T 2gee_A 186 SS 187 (203)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B* | Back alignment and structure |
|---|
Probab=94.17 E-value=0.21 Score=44.55 Aligned_cols=84 Identities=15% Similarity=0.173 Sum_probs=54.0
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC------CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE------AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATT 125 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 125 (454)
..|.-+++...+.+...|+|..+... -.-.|+|...... +..... .. .....+.+.|.+|.|||.
T Consensus 107 ~pP~~l~~~~~~~~~l~lsW~~p~~~~~~~~~l~Yevry~~~~~~-w~~~~~--~~------~~~~~~~~~l~~L~p~t~ 177 (214)
T 2b5i_B 107 MAPISLQVVHVETHRCNISWEISQASHYFERHLEFEARTLSPGHT-WEEAPL--LT------LKQKQEWICLETLTPDTQ 177 (214)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSCCGGGTTCEEEEEEEECTTSC-STTSCC--EE------ECSCCCEEEECSCCTTCE
T ss_pred CCCceEEEEEecCCeEEEEECCCCccccCCCceEEEEEEecCCCC-hheeee--ee------ecccceEEEeccCCCCCE
Confidence 56788888877778899999987532 1345667665331 111100 00 112244677899999999
Q ss_pred EEEEeCc------------cCceeEEECCCC
Q 012895 126 YYYRCGG------------RGPEFSFKMPPA 144 (454)
Q Consensus 126 Y~Yrv~~------------~s~~~~F~T~p~ 144 (454)
|..||.. +|....|+|.|.
T Consensus 178 Y~vqVRa~~~~~~~G~WS~WS~~~~~~T~~~ 208 (214)
T 2b5i_B 178 YEFQVRVKPLQGEFTTWSPWSQPLAFRTKPA 208 (214)
T ss_dssp EEEEEEEEESCCSSCCCCCCCCCEEEECCC-
T ss_pred EEEEEEEeeCCCCCCCccCCCCCEEEEcCCC
Confidence 9999862 356788999875
|
| >3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.15 E-value=0.21 Score=42.93 Aligned_cols=70 Identities=14% Similarity=0.255 Sum_probs=45.8
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCCC-----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCE
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDKE-----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATT 125 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 125 (454)
...|..+.+...+.+++.|.|...... ..-.|+|.......+..... . -.....|++|+|++.
T Consensus 103 p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~----------~--~~~~~~~~~L~p~t~ 170 (197)
T 3lpw_A 103 PLPPGKITLMDVTRNSVSLSWEKPEHDGGSRILGYIVEMQTKGSDKWATCAT----------V--KVTEATITGLIQGEE 170 (197)
T ss_dssp CCCCSCEEEEEECSSCEEEEECCCSCCTTSCCCEEEEEEEETTCSCCEEEEE----------E--SSSEEEECCCCTTCE
T ss_pred CCCCcccEEEeccCCeEEEEecCCCcCCCCcccEEEEEEEeCCCCceEEeec----------c--cccEEEeCCcCCCCE
Confidence 356778888777789999999976432 22466676554332222111 0 122357899999999
Q ss_pred EEEEeCc
Q 012895 126 YYYRCGG 132 (454)
Q Consensus 126 Y~Yrv~~ 132 (454)
|.|+|..
T Consensus 171 Y~~~V~A 177 (197)
T 3lpw_A 171 YSFRVSA 177 (197)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999974
|
| >1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=94.13 E-value=0.23 Score=43.32 Aligned_cols=73 Identities=10% Similarity=0.045 Sum_probs=45.6
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCC--C----CCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCC
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDD--K----EAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPAT 124 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~--~----~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 124 (454)
...|..+.+.....+++.|.|.... . ...-.|+|.............. .........|++|+|++
T Consensus 105 ~~~P~~~~~~~~~~~sv~l~W~~p~~~~~ng~i~~Y~v~~~~~~~~~~~~~~~~---------~~~~~~~~~i~~L~p~t 175 (205)
T 1cfb_A 105 FKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNI---------FDWRQNNIVIADQPTFV 175 (205)
T ss_dssp SCCCSCCEEECSSTTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCCEEEEE---------CCTTCCEEEECSCCSSC
T ss_pred CCCCeeeEeecCCCCeEEEEEECCCccccCCCceEEEEEEEECCCCCCcEEEEe---------cCCCccEEEEcCCCCCc
Confidence 3467777777777889999998764 1 1234666766544321111000 11123456789999999
Q ss_pred EEEEEeCc
Q 012895 125 TYYYRCGG 132 (454)
Q Consensus 125 ~Y~Yrv~~ 132 (454)
.|.+||..
T Consensus 176 ~Y~~~V~A 183 (205)
T 1cfb_A 176 KYLIKVVA 183 (205)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999964
|
| >2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.13 E-value=0.14 Score=44.67 Aligned_cols=69 Identities=16% Similarity=0.232 Sum_probs=44.3
Q ss_pred CCeeEEEEecC--CCcEEEEEEeCC--CCCccEEEEeecCCCCc-eEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 53 DPQQVHISLAA--KDYIRVSWITDD--KEAESVVEYGKLPGRYN-TVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 53 ~p~~v~l~~~~--~~~~~v~W~t~~--~~~~~~v~y~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
.|.++.+.... .+++.|.|.... ....-.|+|........ .... ..+-...+.|+||+|++.|.
T Consensus 2 ~P~~l~v~~v~~~~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p~t~Y~ 70 (201)
T 2ha1_A 2 GPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKEAT-----------IPGHLNSYTIKGLKPGVVYE 70 (201)
T ss_dssp CCCEEECCSCSCCSSCEEEEEECCSSTTCCEEEEEEEETTCSSCCEEEE-----------ECTTCCEEEECSCCTTEEEE
T ss_pred CceeEEEEecCCCCCEEEEEEeCCCCCCceEEEEEEEECCCCCceEEEe-----------cCCCccEEEecCCCCCCEEE
Confidence 46677777655 889999999873 12345677775433211 1111 11123367899999999999
Q ss_pred EEeCc
Q 012895 128 YRCGG 132 (454)
Q Consensus 128 Yrv~~ 132 (454)
+||..
T Consensus 71 ~~V~a 75 (201)
T 2ha1_A 71 GQLIS 75 (201)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99964
|
| >1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A | Back alignment and structure |
|---|
Probab=94.09 E-value=0.15 Score=44.99 Aligned_cols=85 Identities=13% Similarity=0.187 Sum_probs=51.2
Q ss_pred CCCCeeEEEEec--CCCcEEEEEEeCCCCC----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCC
Q 012895 51 ESDPQQVHISLA--AKDYIRVSWITDDKEA----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPAT 124 (454)
Q Consensus 51 ~~~p~~v~l~~~--~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 124 (454)
...|..+.+... ..+++.|.|....... .-.|+|.......+...... ....-.....|++|+|+|
T Consensus 104 p~pP~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~~~~~~~~--------~~~~~~~~~~i~~L~p~t 175 (215)
T 1bqu_A 104 PNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE--------DTASTRSSFTVQDLKPFT 175 (215)
T ss_dssp CCCCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCGG--------GGCSCCSEEEECSCCSSE
T ss_pred CCCCCceEEEEecCCCceEEEEEeCCCCCCcceEEEEEEEccCCCCCceEeccc--------cccCccceEEeCCCCCCC
Confidence 346777888764 4789999998764321 24566765543222211100 001223456789999999
Q ss_pred EEEEEeCc-----------cCceeEEECCC
Q 012895 125 TYYYRCGG-----------RGPEFSFKMPP 143 (454)
Q Consensus 125 ~Y~Yrv~~-----------~s~~~~F~T~p 143 (454)
.|.+||.. ++....++|++
T Consensus 176 ~Y~~~V~A~n~~g~g~~S~~S~~~~~~T~~ 205 (215)
T 1bqu_A 176 EYVFRIRCMKEDGKGYWSDWSEEASGITYE 205 (215)
T ss_dssp EEEEEEEEEETTSCSCCCCCCCCEEEEECC
T ss_pred EEEEEEEEccCCCCCccCCCCCcccccccc
Confidence 99999853 23456677765
|
| >3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A | Back alignment and structure |
|---|
Probab=93.63 E-value=0.28 Score=43.03 Aligned_cols=84 Identities=19% Similarity=0.283 Sum_probs=51.1
Q ss_pred CCCCCeeEEEEecC--CCcEEEEEEeCCCC----CccEEEEeecCCCCc--eEEEeEeEEEeeeeeecCeEEEEEECCCC
Q 012895 50 SESDPQQVHISLAA--KDYIRVSWITDDKE----AESVVEYGKLPGRYN--TVATGEHTSYQFFFYKSGKIHHVKIGPLE 121 (454)
Q Consensus 50 ~~~~p~~v~l~~~~--~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~gL~ 121 (454)
+...|..+.+...+ .+++.|.|.-...+ ..-.|+|........ .... . ..+-...+.|++|+
T Consensus 105 P~~~P~~~~~~~~~~s~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~-~---------~~~~~~~~~i~~L~ 174 (211)
T 3p4l_A 105 PTSPPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIE-P---------VVGNRLTHQIQELT 174 (211)
T ss_dssp CCSCCEEEEEEEETTEEEEEEEEEECCTTCCSCCCEEEEEEESCTTSCGGGSEEE-E---------EESSCSEEEECCCC
T ss_pred CCCCCcceEEEecCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCceEEE-E---------ecCCeeEEEEcCCC
Confidence 34478888888774 68999999976432 223566765443211 1110 0 11123356789999
Q ss_pred CCCEEEEEeCc--------cCceeEEECCC
Q 012895 122 PATTYYYRCGG--------RGPEFSFKMPP 143 (454)
Q Consensus 122 p~t~Y~Yrv~~--------~s~~~~F~T~p 143 (454)
|++.|.++|.. .++...|+|..
T Consensus 175 p~t~Y~~~V~A~n~~G~g~~S~~v~~~~~~ 204 (211)
T 3p4l_A 175 LDTPYYFKIQARNSKGMGPMSEAVQFRTPK 204 (211)
T ss_dssp TTCEEEEEEEEEETTEECCCCCCEEEECC-
T ss_pred CCCEEEEEEEEEcCCccCCCCCCEEccCcc
Confidence 99999999963 24555666543
|
| >2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A | Back alignment and structure |
|---|
Probab=93.53 E-value=0.2 Score=44.05 Aligned_cols=80 Identities=19% Similarity=0.301 Sum_probs=43.6
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCCC----ccEEEEeecCCCCceEEEeEeEEEeee--eeecCeEEEEEECCCCCCCEE
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKEA----ESVVEYGKLPGRYNTVATGEHTSYQFF--FYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~gL~p~t~Y 126 (454)
.|..+++.....+++.|.|.-..... .-.|+|...+.............+... .....-...+.|++|+|+|.|
T Consensus 4 pP~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y 83 (214)
T 2ibg_A 4 PPTPPNVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQHTY 83 (214)
T ss_dssp CCCCCEEEEEETTEEEEEEEEECCSSCCEEEEEEEEEESSSSCCCEECSCCEECCSSSCSSSSEEEEEEEECSCCTTCEE
T ss_pred CCCCCEeeEecCCEEEEEEECCCCCCCCceEEEEEEEECCCCCcCcccccccCccccccccccCcceeEEecCCcCCCEE
Confidence 45555566556889999998775322 234556554321111111110000000 000123456789999999999
Q ss_pred EEEeCc
Q 012895 127 YYRCGG 132 (454)
Q Consensus 127 ~Yrv~~ 132 (454)
.|||..
T Consensus 84 ~~~V~A 89 (214)
T 2ibg_A 84 RFRILA 89 (214)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999864
|
| >1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.50 E-value=0.14 Score=40.48 Aligned_cols=70 Identities=14% Similarity=0.211 Sum_probs=43.1
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCCC----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKEA----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
.|..+++.....+++.|.|....... .-.|+|........... . ....-...+.|++|+|++.|.+
T Consensus 20 ~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~----~------~~~~~~~~~~i~~L~p~t~Y~~ 89 (119)
T 1wfn_A 20 PVGHLSFSEILDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNTRVT----H------YLPNVTLEYRVTGLTALTTYTI 89 (119)
T ss_dssp CCSCCEEESCCSSEEEEECCCCTTCCSCCCEEEEEEEESSCGGGCCC----E------EECSSCCEEEEESCCTTCEEEE
T ss_pred CCCceEEEECCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCceEE----E------EeCCCceEEEEcCCCCCCEEEE
Confidence 46667776666889999998764322 23566655432111000 0 0112344567899999999999
Q ss_pred EeCc
Q 012895 129 RCGG 132 (454)
Q Consensus 129 rv~~ 132 (454)
||..
T Consensus 90 ~V~A 93 (119)
T 1wfn_A 90 EVAA 93 (119)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9964
|
| >1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.25 E-value=0.37 Score=37.65 Aligned_cols=69 Identities=13% Similarity=0.100 Sum_probs=45.0
Q ss_pred CCCeeEEEEecC--CCcEEEEEEeCCC---C----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCC
Q 012895 52 SDPQQVHISLAA--KDYIRVSWITDDK---E----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEP 122 (454)
Q Consensus 52 ~~p~~v~l~~~~--~~~~~v~W~t~~~---~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p 122 (454)
..|..+.+.... .+++.|.|..+.. + -.-.|+|.......+...... . ...+.|.+|+|
T Consensus 9 ~pP~~l~v~~~~~~~~~l~lsW~~P~~w~~~~~~~l~Y~v~y~~~~~~~w~~~~~~----------~--~~~~~l~~L~p 76 (109)
T 1uc6_A 9 DPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVELS----------N--GTAHTITDAYA 76 (109)
T ss_dssp CCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCCEEES----------S--CSEEEETTCCS
T ss_pred CCCcceEEEEcCCCCCEEEEEECCCCCccCCCcEEEEEEEEEEECCCCCcEEEecc----------c--CCEEEEeCCCC
Confidence 467777777643 6899999998753 1 235677776654322221110 1 13467899999
Q ss_pred CCEEEEEeCc
Q 012895 123 ATTYYYRCGG 132 (454)
Q Consensus 123 ~t~Y~Yrv~~ 132 (454)
|+.|.+||..
T Consensus 77 ~t~Y~~~VRa 86 (109)
T 1uc6_A 77 GKEYIIQVAA 86 (109)
T ss_dssp SSCEEEEEEC
T ss_pred CCEEEEEEEE
Confidence 9999999964
|
| >3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* | Back alignment and structure |
|---|
Probab=93.22 E-value=0.32 Score=49.91 Aligned_cols=81 Identities=19% Similarity=0.266 Sum_probs=50.1
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCCC----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKEA----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
..|..+.+.....+++.|+|..+..+. .-.|+|............ ..-...++|++|+|+|.|.
T Consensus 442 ~~Ps~~~~~~~s~tSV~LsW~pP~~~ng~I~~Y~V~y~~~~~~~~~~~v------------~~~~ts~~l~gL~P~T~Y~ 509 (536)
T 3fl7_A 442 TEPPKVRLEGRSTTSLSVSWSIPPPQQSRVWKYEVTYRKKGDSNSYNVR------------RTEGFSVTLDDLAPDTTYL 509 (536)
T ss_dssp CCCCEEEEEECCC-CCEEEEECCTTTTTTCSEEEEEEEEC--CCCCEEE------------EESSSEEECCSCCSSCEEE
T ss_pred cCCCCCceeeccCCeEEEEEECCcCCCCcccEEEEEEEECCCCceEEEE------------cCCCCEEEECCCCCCCEEE
Confidence 457777775555889999999764322 346777665432111100 1112346789999999999
Q ss_pred EEeCc--------cCceeEEECCCC
Q 012895 128 YRCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 128 Yrv~~--------~s~~~~F~T~p~ 144 (454)
+||.. .|....|+|++.
T Consensus 510 frVrA~n~~G~Gp~S~~v~~~T~~~ 534 (536)
T 3fl7_A 510 VQVQALTQEGQGAGSKVHEFQTLSP 534 (536)
T ss_dssp EEEEEECC---CEECCCEEEECCC-
T ss_pred EEEEEEcCCcccCCCCCEEEEeCCC
Confidence 99963 356788999774
|
| >2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.19 E-value=0.051 Score=42.44 Aligned_cols=72 Identities=21% Similarity=0.286 Sum_probs=45.5
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEE
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYR 129 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yr 129 (454)
...|..+++.....+++.|+|...... ..-.|+|.......... . .. ..+-...++|+||+|+|.|.++
T Consensus 8 p~~P~~l~v~~~t~~si~lsW~~p~g~i~~Y~v~y~~~~~~~~~~---~---~~----v~~~~~~~~l~~L~p~t~Y~~~ 77 (105)
T 2ekj_A 8 RSPPSNLALASETPDSLQVSWTPPLGRVLHYWLTYAPASGLGPEK---S---VS----VPGARSHVTLPDLQAATKYRVL 77 (105)
T ss_dssp CCCCEEEEEEEEETTEEEEEEECCSSCCSBBCBBCCCTTSCSCCC---C---BC----CBTTSSEEEECSCCSSCCCBCB
T ss_pred CCCCCceEEEeCCCCEEEEEEeCCCCcceEEEEEEEECCCCCccE---E---EE----eCCCcCEEEeCCCCCCCEEEEE
Confidence 346788888877799999999887422 23355565443211000 0 00 1122345689999999999999
Q ss_pred eCc
Q 012895 130 CGG 132 (454)
Q Consensus 130 v~~ 132 (454)
|..
T Consensus 78 V~A 80 (105)
T 2ekj_A 78 VSA 80 (105)
T ss_dssp BCB
T ss_pred EEE
Confidence 974
|
| >1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A | Back alignment and structure |
|---|
Probab=93.13 E-value=0.34 Score=42.66 Aligned_cols=83 Identities=14% Similarity=0.208 Sum_probs=51.0
Q ss_pred CCCCeeEEEEec------CCCcEEEEEEeCCCCC----ccEEEEe-ecCCCCceEEEeEeEEEeeeeeecCeEEEEEECC
Q 012895 51 ESDPQQVHISLA------AKDYIRVSWITDDKEA----ESVVEYG-KLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGP 119 (454)
Q Consensus 51 ~~~p~~v~l~~~------~~~~~~v~W~t~~~~~----~~~v~y~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 119 (454)
...|..+.+... ..+++.|.|..+.... .-.|+|. ......+..+.. ..+....+.|.+
T Consensus 109 p~pP~~~~~~~~~~~~~~~~~~~~l~W~~p~~~~~~~l~Y~v~y~~~~~~~~w~~~~~----------~~~~~~~~~l~~ 178 (215)
T 1cd9_B 109 LEPPMLQALDIGPDVVSHQPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLVFH----------LPSSKDQFELCG 178 (215)
T ss_dssp CCCCEEEECCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSTTCCCEEEEE----------EESCEEEEEECC
T ss_pred eCCCcEEEEEEeccccCCCCCeEEEEEeCCCCCCeEEEEEEEEEccCCCCCCcEEEec----------ccCcceEEEEcC
Confidence 456777776654 4678999998774322 3456776 443332222211 011235678999
Q ss_pred CCCCCEEEEEeCc-----------cCceeEEECCC
Q 012895 120 LEPATTYYYRCGG-----------RGPEFSFKMPP 143 (454)
Q Consensus 120 L~p~t~Y~Yrv~~-----------~s~~~~F~T~p 143 (454)
|+|+|.|.+||.. +|....|+|+.
T Consensus 179 L~p~t~Y~~~Vra~~~~g~G~wS~wS~~~~~~T~e 213 (215)
T 1cd9_B 179 LHQAPVYTLQMRCIRSSLPGFWSPWSPGLQLRPTM 213 (215)
T ss_dssp CCSCSCEEEEEEEEESSSCCCCCCCCCCEEECCCC
T ss_pred CCCCCEEEEEEEeeECCCCCCCcCCCCccceecCC
Confidence 9999999999852 35566777765
|
| >1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A | Back alignment and structure |
|---|
Probab=92.97 E-value=0.32 Score=45.47 Aligned_cols=85 Identities=13% Similarity=0.187 Sum_probs=52.5
Q ss_pred CCCCeeEEEEec--CCCcEEEEEEeCCCCC----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCC
Q 012895 51 ESDPQQVHISLA--AKDYIRVSWITDDKEA----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPAT 124 (454)
Q Consensus 51 ~~~p~~v~l~~~--~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 124 (454)
...|..+.+... ..+++.|.|..+.... .-.|+|.......+..+... ....-.....|++|+|+|
T Consensus 200 p~pP~~~~v~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~w~~~~~~--------~~~~~~~~~~l~~L~p~t 271 (303)
T 1i1r_A 200 PNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE--------DTASTRSSFTVQDLKPFT 271 (303)
T ss_dssp CCCCEEEEEECCSSSSSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCGG--------GGCSCCSEEEECSCCTTC
T ss_pred cCCCcceEEEEecCCCCEEEEEECCCCCCCcccEEEEEEEEeCCCCCceEEccc--------cCCCceeEEEeCCCCCCC
Confidence 346777777654 3689999999775321 23667766543222221100 001223456799999999
Q ss_pred EEEEEeCc-----------cCceeEEECCC
Q 012895 125 TYYYRCGG-----------RGPEFSFKMPP 143 (454)
Q Consensus 125 ~Y~Yrv~~-----------~s~~~~F~T~p 143 (454)
.|.+||.. +|+...|+|+.
T Consensus 272 ~Y~~rV~A~n~~G~G~~S~wS~~~~~~T~e 301 (303)
T 1i1r_A 272 EYVFRIRCMKEDGKGYWSDWSEEASGITYE 301 (303)
T ss_dssp EEEEEEEEEETTSCSCCCCCCCCEEEECCC
T ss_pred EEEEEEEeccCCCCCCcCCCCCccceeCCc
Confidence 99999863 35667788865
|
| >2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A | Back alignment and structure |
|---|
Probab=92.76 E-value=0.37 Score=42.14 Aligned_cols=71 Identities=18% Similarity=0.196 Sum_probs=44.3
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCCC----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEE
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDKE----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 126 (454)
...|..+.+.....+++.|.|..+... ..-.|+|............ ...-...+.|++|+|++.|
T Consensus 110 P~~P~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p~t~Y 178 (209)
T 2vkw_A 110 PSAPKLEGQMGEDGNSIKVNLIKQDDGGSPIRHYLVRYRALSSEWKPEIR-----------LPSGSDHVMLKSLDWNAEY 178 (209)
T ss_dssp CCCCEEEEEECTTSSCEEEEEECCCCTTSCCCEEEEEEEETTSCCCCCEE-----------ECTTCCEEEECSCCTTCEE
T ss_pred CCCCcccccccccCCeEEEEEECcccCCCCCceEEEEEECCCCCCceeee-----------cCCCccEEEecCCCCCCEE
Confidence 346667776666689999999987322 2346677662221111110 1112234678999999999
Q ss_pred EEEeCc
Q 012895 127 YYRCGG 132 (454)
Q Consensus 127 ~Yrv~~ 132 (454)
.|||..
T Consensus 179 ~~~V~A 184 (209)
T 2vkw_A 179 EVYVVA 184 (209)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999964
|
| >1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=92.74 E-value=0.49 Score=41.16 Aligned_cols=70 Identities=11% Similarity=0.195 Sum_probs=42.8
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC----CccEEEEeecCCC-CceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE----AESVVEYGKLPGR-YNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 126 (454)
..|..+.+.. ..+++.|.|.-.... ..-.|+|...... .+...... .++......+ +|+|+|.|
T Consensus 7 ~~P~~~~~~~-~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~---------~~~~~~~~~~-~L~p~t~Y 75 (205)
T 1cfb_A 7 NAPKLTGITC-QADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEK---------VPNTDSSFVV-QMSPWANY 75 (205)
T ss_dssp CCCEEEEEEE-CSSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEEEE---------EETTCSEEEE-ECCSSEEE
T ss_pred CCCCCcEEEe-cCCEEEEEEECcccCCCceEEEEEEEecCCCCCCceeeeec---------cCCCceEEEE-eCCCCCEE
Confidence 4678888888 899999999987422 2345677654321 12111111 0111123345 89999999
Q ss_pred EEEeCc
Q 012895 127 YYRCGG 132 (454)
Q Consensus 127 ~Yrv~~ 132 (454)
.|||..
T Consensus 76 ~~~V~A 81 (205)
T 1cfb_A 76 TFRVIA 81 (205)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999863
|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B | Back alignment and structure |
|---|
Probab=92.69 E-value=0.37 Score=46.29 Aligned_cols=72 Identities=14% Similarity=0.185 Sum_probs=46.5
Q ss_pred CCCeeEEEEecCCC-cEEEEEEeCCC--CCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 52 SDPQQVHISLAAKD-YIRVSWITDDK--EAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 52 ~~p~~v~l~~~~~~-~~~v~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
..|..+.+.....+ ++.|.|.-... ...-.|+|....+......... ...-...+.|++|+|++.|.|
T Consensus 4 ~~P~~l~~~~~~~~~sv~l~W~~~~~~~~~~Y~v~~~~~~~~~~~~~~~~---------~~~~~~~~~i~~L~p~t~Y~~ 74 (375)
T 3t1w_A 4 SPPTNLHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLEEV---------VHADQSSCTFDNLSPGLEYNV 74 (375)
T ss_dssp CCCEEEEEEEETTTTEEEEEEECCSCSSCCEEEEEEEETTCTTSCCEEEE---------EETTCCEEEECCCCTTCCEEE
T ss_pred CCCCccEEEecCCCeEEEEEEeCCCCCCeeeEEEEEEECCCCCCcceeEE---------cCCCccEEEEcCCcCCCEEEE
Confidence 46788888877777 99999998752 2345677776543211111100 111234567899999999999
Q ss_pred EeCc
Q 012895 129 RCGG 132 (454)
Q Consensus 129 rv~~ 132 (454)
+|..
T Consensus 75 ~V~a 78 (375)
T 3t1w_A 75 SVYT 78 (375)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9964
|
| >2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens} | Back alignment and structure |
|---|
Probab=92.53 E-value=0.98 Score=40.09 Aligned_cols=76 Identities=16% Similarity=0.269 Sum_probs=47.0
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCCCccEEEEeecCCCCceE--EEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKEAESVVEYGKLPGRYNTV--ATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYR 129 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yr 129 (454)
..|..++.+....+++.++|..+.. ....-.|..--+. ... ..++.++ .+++||+|+|.|.||
T Consensus 152 ~Pp~NL~At~VT~tSVtLsW~aP~~-~~GI~gY~ly~~g-~~v~~v~~~~ts-------------yt~~gLk~~TeYsF~ 216 (238)
T 2w1n_A 152 NPVRDFKASEINKKNVTVTWTEPET-TEGLEGYILYKDG-KKVAEIGKDETS-------------YTFKKLNRHTIYNFK 216 (238)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSC-CTTEEEEEEEETT-EEEEEEETTCCE-------------EEECSCCTTCEEEEE
T ss_pred CCCCceEEEEccCCeEEEEecCCCC-CCCceeEEEEeCC-ceeEEeeccceE-------------EEecCCCCCCEEEEE
Confidence 5677788888889999999999853 3233444432111 111 1111122 347899999999999
Q ss_pred eCc--------cCceeEEECC
Q 012895 130 CGG--------RGPEFSFKMP 142 (454)
Q Consensus 130 v~~--------~s~~~~F~T~ 142 (454)
|.. ..+...+||.
T Consensus 217 V~A~d~~G~~Ss~e~vtVrTl 237 (238)
T 2w1n_A 217 IAAKYSNGEVSSKESLTLRTA 237 (238)
T ss_dssp EEEEETTSCBCCCEEEEEECC
T ss_pred EEEEeCCCCccccCcEEEEec
Confidence 963 2344566663
|
| >2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A | Back alignment and structure |
|---|
Probab=92.04 E-value=0.091 Score=40.51 Aligned_cols=60 Identities=18% Similarity=0.197 Sum_probs=37.5
Q ss_pred CCCcEEEEEEeCCCC-CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEeCc
Q 012895 63 AKDYIRVSWITDDKE-AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCGG 132 (454)
Q Consensus 63 ~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv~~ 132 (454)
..+++.|+|...... ..-.|+|....+...... .. .++-...+.|+||.|||.|..+|..
T Consensus 18 t~~S~~lsW~~p~~~v~~Y~I~y~~~~g~~~~~~------~~----v~g~~~s~~l~~L~PgT~Y~V~v~a 78 (95)
T 2h41_A 18 TASSFVVSWVSASDTVSGFRVEYELSEEGDEPQY------LD----LPSTATSVNIPDLLPGRKYIVNVYQ 78 (95)
T ss_dssp GGGCEEEECCCSCTTEEEEEEEEEETTTCCCCEE------EE----EETTCCEEEECSCCTTCEEEEEEEE
T ss_pred CCCeEEEEECCCCCCccEEEEEEEeCCCCCcceE------EE----CCCCccEEEECCCCCCCEEEEEEEE
Confidence 367899999877533 345677876643211100 00 1223445789999999999988753
|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A | Back alignment and structure |
|---|
Probab=91.96 E-value=0.52 Score=45.07 Aligned_cols=72 Identities=14% Similarity=0.185 Sum_probs=45.7
Q ss_pred CCCeeEEEEecCCC-cEEEEEEeCCC--CCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 52 SDPQQVHISLAAKD-YIRVSWITDDK--EAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 52 ~~p~~v~l~~~~~~-~~~v~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
..|..+.+.....+ ++.|.|..... ...-.|+|....+......... ...-...+.|++|+|++.|.|
T Consensus 3 ~~P~~l~~~~~~~~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~---------~~~~~~~~~i~~L~p~t~Y~~ 73 (368)
T 1fnf_A 3 SPPTNLHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLEEV---------VHADQSSCTFDNLSPGLEYNV 73 (368)
T ss_dssp CCCEEEEEEECSSSSCEEEEEECCSCSSCCEEEEEEEETTTCSSCCEEEE---------ECTTCCEEECCCCCTTSCEEE
T ss_pred CCCcceEEEecCCCcEEEEEEeCCCCCCceEEEEEEEECCCCCCceeEEE---------ecCCcCEEEECCCCCCCEEEE
Confidence 46778888876654 69999998742 2345777776544211111100 112234578999999999999
Q ss_pred EeCc
Q 012895 129 RCGG 132 (454)
Q Consensus 129 rv~~ 132 (454)
||..
T Consensus 74 ~V~a 77 (368)
T 1fnf_A 74 SVYT 77 (368)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9964
|
| >3csg_A MBP, maltose-binding protein monobody YS1 fusion, MMBP; engineered binding protein, antibody mimic, synthetic protein interface; 1.80A {Escherichia coli} PDB: 2obg_A 3csb_A* 3a3c_A* 3d4g_A* 3d4c_A* 3ef7_A* | Back alignment and structure |
|---|
Probab=91.88 E-value=0.31 Score=48.78 Aligned_cols=71 Identities=18% Similarity=0.256 Sum_probs=46.5
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCC--CCccEEEEeecCCCC-ceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDK--EAESVVEYGKLPGRY-NTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~--~~~~~v~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
-..|..+|+.-...++++|+|..+.. ...-.|+|....... .... . .+.-..+++|+||+|||.|.
T Consensus 370 l~~~~~l~~~~~~~~s~~l~W~~p~~~~~~~y~v~y~~~~~~~~~~~~-----~------~~~~~~~~~i~~L~p~t~Y~ 438 (461)
T 3csg_A 370 SSVPTNLEVVAATPTSLLISWDASYSSSVSYYRITYGETGGNSPVQEF-----T------VPGSKSTATISGLSPGVDYT 438 (461)
T ss_dssp CCSSCCCEEEEECSSCEEEECCCTTGGGCSEEEEEEEETTCCSCCEEE-----E------EETTCCEEEECSCCTTCEEE
T ss_pred cCCCcceEEeccCCCeEEEEecCCCCCcceEEEEEEEECCCCccceEE-----E------ecCCCceEEecCCCCCCEEE
Confidence 34677888888889999999987611 123466676654221 0110 0 11223568999999999999
Q ss_pred EEeCc
Q 012895 128 YRCGG 132 (454)
Q Consensus 128 Yrv~~ 132 (454)
.+|..
T Consensus 439 ~~v~a 443 (461)
T 3csg_A 439 ITVYA 443 (461)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99864
|
| >1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A | Back alignment and structure |
|---|
Probab=91.85 E-value=1 Score=40.16 Aligned_cols=71 Identities=14% Similarity=0.156 Sum_probs=45.9
Q ss_pred CCCCeeEEEEecC-CCcEEEEEEeCCCCC-----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCC
Q 012895 51 ESDPQQVHISLAA-KDYIRVSWITDDKEA-----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPAT 124 (454)
Q Consensus 51 ~~~p~~v~l~~~~-~~~~~v~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 124 (454)
...|..+++...+ .+++.|.|..+.... .-.|+|....+..+.... . ...-...+.|.+|+||+
T Consensus 122 p~pP~~l~~~~~~~~~~l~v~W~~P~~~~~~~~l~Yev~y~~~~~~~w~~~~-~---------~~~~~~~~~l~~L~p~t 191 (227)
T 1eer_B 122 LDAPVGLVARLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGQGAGSVQRV-E---------ILEGRTECVLSNLRGRT 191 (227)
T ss_dssp CCCCEEEEEEECSSTTCEEEEEECCSSCSCGGGEEEEEEEECCSSSCCCCEE-E---------ECTTCCEEEECCCCSSC
T ss_pred cCcCcceEEEEcCCCCeEEEEEcCCCCcccccceEEEEEEEcCCCCCcEEEE-E---------EecCceEEEEcccCCCC
Confidence 4578888888875 789999999875321 246667655432222110 0 01112356789999999
Q ss_pred EEEEEeC
Q 012895 125 TYYYRCG 131 (454)
Q Consensus 125 ~Y~Yrv~ 131 (454)
.|..||.
T Consensus 192 ~Y~vqVR 198 (227)
T 1eer_B 192 RYTFAVR 198 (227)
T ss_dssp EEEEEEE
T ss_pred eEEEEEE
Confidence 9999986
|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A | Back alignment and structure |
|---|
Probab=91.72 E-value=1.3 Score=42.20 Aligned_cols=94 Identities=11% Similarity=0.021 Sum_probs=54.7
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEe
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRC 130 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv 130 (454)
..|..+.+.....+++.|.|...... ..-.|+|............ . ...-.....|++|+|++.|.|+|
T Consensus 187 ~~P~~l~~~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~~----~------~~~~~~~~~i~~L~p~t~Y~~~V 256 (368)
T 1fnf_A 187 DSPTGIDFSDITANSFTVHWIAPRATITGYRIRHHPEHFSGRPRED----R------VPHSRNSITLTNLTPGTEYVVSI 256 (368)
T ss_dssp CCCEEEEEESCCSSEEEEEEECCSSCCSEEEEEEECSCCSSCCEEE----E------EETTCCEEEEESCCTTCEEEEEE
T ss_pred CCCCccEEEEccCCEEEEEEeCCCCCcCEEEEEEecCCCCCCccEE----E------eCCCcCEEEECCCCCCCEEEEEE
Confidence 46777777766789999999886432 2346667655432111100 0 11123346788999999999999
Q ss_pred Ccc-------CceeEEECCCC-CCCeEEEEEec
Q 012895 131 GGR-------GPEFSFKMPPA-NFPIEFAIVGD 155 (454)
Q Consensus 131 ~~~-------s~~~~F~T~p~-~~~~~f~~igD 155 (454)
... .....+.|+|. ...+++..+++
T Consensus 257 ~A~n~~g~~~~~~~~~~t~p~~P~~l~~~~~~~ 289 (368)
T 1fnf_A 257 VALNGREESPLLIGQQSTVSDVPRDLEVVAATP 289 (368)
T ss_dssp EEEETTEECCCEEEEEECCCCSCEEEEEEEEET
T ss_pred EEEeCCccCCcccccccCCCCCCCeeEEEecCC
Confidence 641 12234667664 23344444443
|
| >1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=91.57 E-value=0.28 Score=39.47 Aligned_cols=68 Identities=19% Similarity=0.284 Sum_probs=43.2
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCCC----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKEA----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
..|..+++.... +++.|+|.-..... .-.|+|... ....... . ...-....+|++|+|+|.|.
T Consensus 29 ~~P~~l~~~~~~-~sv~l~W~~P~~~~g~i~~Y~v~y~~~-~~~~~~~-------~----~~~~~~~~~i~~L~p~t~Y~ 95 (126)
T 1x5i_A 29 EVPSSLHVRPLV-TSIVVSWTPPENQNIVVRGYAIGYGIG-SPHAQTI-------K----VDYKQRYYTIENLDPSSHYV 95 (126)
T ss_dssp CSCSEEEEEEET-TEEEEEEECCSCTTBCCCEEEEEECSS-CGGGEEE-------E----CCTTCCEEEECSCCSSCEEC
T ss_pred CCCCeeEEEecC-CEEEEEEcCCCCCCCCEeEEEEEEEcC-CCCceEE-------E----eCCCeeEEEEeCCCCCCEEE
Confidence 377888888775 89999999875331 235556531 1111100 0 12234557899999999999
Q ss_pred EEeCc
Q 012895 128 YRCGG 132 (454)
Q Consensus 128 Yrv~~ 132 (454)
++|..
T Consensus 96 ~~V~A 100 (126)
T 1x5i_A 96 ITLKA 100 (126)
T ss_dssp CEEEE
T ss_pred EEEEE
Confidence 99964
|
| >3up1_A Interleukin-7 receptor subunit alpha; cytokine receptor, fibronectin type 3 fold, membrane and SOL glycosylation, immune system; HET: NAG FUC NGA; 2.15A {Homo sapiens} PDB: 3di3_B* 3di2_B* | Back alignment and structure |
|---|
Probab=91.47 E-value=0.95 Score=40.65 Aligned_cols=83 Identities=17% Similarity=0.214 Sum_probs=52.7
Q ss_pred CCCCeeEEEEecC-CCcEEEEEEeCCCC------CccEEEEeecCC-CCceEEEeEeEEEeeeeeecCeEEEEEECCCCC
Q 012895 51 ESDPQQVHISLAA-KDYIRVSWITDDKE------AESVVEYGKLPG-RYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEP 122 (454)
Q Consensus 51 ~~~p~~v~l~~~~-~~~~~v~W~t~~~~------~~~~v~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p 122 (454)
...|..+.|.... ...+.|.|..+..+ -.-.|+|..... ..+.... .......+.+.+|+|
T Consensus 113 PdPP~nLtv~~~~~~~~l~LsW~~P~~~~~~~~~L~YEVrYr~~~~~~~W~~v~-----------~~~t~~~i~l~~L~P 181 (223)
T 3up1_A 113 PEAPFDLSVVYREGANDFVVTFNTSHLQKKYVKVLMHDVAYRQEKDENKWTHVN-----------LSSTKLTLLQRKLQP 181 (223)
T ss_dssp CCCCEEEEEEEETTTTEEEEEEECGGGGCSSSCCEEEEEEEEESSCSSCCEEEE-----------ESSSEEEEEGGGSCT
T ss_pred cCCCcceEEEEEcCCCCEEEEECCCCCCCCcceeEEEEEEEEeCCCCCceEEEE-----------ecCceeEEeccccCC
Confidence 4467778887765 67799999988422 134566766532 2222211 111233456789999
Q ss_pred CCEEEEEeCc------------cCceeEEECCCC
Q 012895 123 ATTYYYRCGG------------RGPEFSFKMPPA 144 (454)
Q Consensus 123 ~t~Y~Yrv~~------------~s~~~~F~T~p~ 144 (454)
+|.|..||.. +|....|+|++.
T Consensus 182 gt~Y~vqVR~r~~~~~~G~WSeWS~~~~~~T~~~ 215 (223)
T 3up1_A 182 AAMYEIKVRSIPDHYFKGFWSEWSPSYYFRTPEI 215 (223)
T ss_dssp TCEEEEEEEEEECSSCCBCCCCCCCCEEEECCCC
T ss_pred CcEEEEEEEEeeCCCCCCCCCCCCCCeEEECCCC
Confidence 9999999852 356678999764
|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B | Back alignment and structure |
|---|
Probab=91.16 E-value=0.98 Score=43.26 Aligned_cols=82 Identities=17% Similarity=0.196 Sum_probs=50.9
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCC--CCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEe
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDK--EAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRC 130 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv 130 (454)
.|..+.+...+.+++.|.|..... ...-.|+|............ . ..+-.....|++|+|++.|.|+|
T Consensus 189 ~p~~l~~~~~~~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~~------~----~~~~~~~~~i~~L~p~t~Y~~~V 258 (375)
T 3t1w_A 189 PPTDLRFTNIGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVAEL------S----ISPSDNAVVLTNLLPGTEYVVSV 258 (375)
T ss_dssp CCEEEEEESCCSSCEEEEEECCSSCCCCEEEEEEEEGGGTTCCEEE------E----ECTTCCEEEECSCCTTCEEEEEE
T ss_pred CCceeEEEecccCEEEEEEcCCCCCCccEEEEEEEeCCCCCCcEEE------E----cCCCcCEEEeCCCCCCCEEEEEE
Confidence 677777776778999999998632 23456777655422111100 0 11223456789999999999999
Q ss_pred Cc-------cCceeEEECCCC
Q 012895 131 GG-------RGPEFSFKMPPA 144 (454)
Q Consensus 131 ~~-------~s~~~~F~T~p~ 144 (454)
.. ......++|+|.
T Consensus 259 ~A~~~~g~s~~~~~~~~t~p~ 279 (375)
T 3t1w_A 259 SSVYEQHESTPLRGRQKTGLD 279 (375)
T ss_dssp EEEETTEECCCEEEEEECCCC
T ss_pred EEEcCCCcCCceeeEEecCCC
Confidence 63 122345667663
|
| >2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A | Back alignment and structure |
|---|
Probab=90.94 E-value=0.65 Score=44.58 Aligned_cols=79 Identities=18% Similarity=0.283 Sum_probs=45.4
Q ss_pred eEEEEecCCCcEEEEEEeCCCCC----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEeC
Q 012895 56 QVHISLAAKDYIRVSWITDDKEA----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCG 131 (454)
Q Consensus 56 ~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv~ 131 (454)
.+.......+++.|.|.-..... .-.|+|.......+... .. ..+-.....|++|+|++.|.|||.
T Consensus 298 ~~~~~~~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~----~~------~~~~~~~~~i~~L~~~t~Y~~~V~ 367 (389)
T 2jll_A 298 SIHGQPSSGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLE----KK------VQGNKDHIILEHLQWTMGYEVQIT 367 (389)
T ss_dssp CEEEEEETTTEEEEEECCCCCCSSCCCEEEEEEEC-----CCBC----CE------ECTTCCEEEECSCCTTCEEEEEEE
T ss_pred ccccccCcCCEEEEEEECCCCCCCcccEEEEEEEeCCCCcceeE----ee------ccCCcceEEeCCcCCCCEEEEEEE
Confidence 35555556899999998654322 24566655322111100 00 122234567899999999999996
Q ss_pred c-------cCceeEEECCCC
Q 012895 132 G-------RGPEFSFKMPPA 144 (454)
Q Consensus 132 ~-------~s~~~~F~T~p~ 144 (454)
. ......|+|+|.
T Consensus 368 A~n~~G~s~~s~~~~~T~~~ 387 (389)
T 2jll_A 368 AANRLGYSEPTVYEFSMPPK 387 (389)
T ss_dssp EEC-CCBCCCEEEEEECCCC
T ss_pred EEcCCcCCCceeeEecCCCC
Confidence 3 123457888764
|
| >2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=90.85 E-value=0.88 Score=42.62 Aligned_cols=83 Identities=11% Similarity=0.103 Sum_probs=50.8
Q ss_pred CCCCeeEEEEec------CCCcEEEEEEeCCCCC----ccEEEEe-ecCCCCceEEEeEeEEEeeeeeecCeEEEEEECC
Q 012895 51 ESDPQQVHISLA------AKDYIRVSWITDDKEA----ESVVEYG-KLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGP 119 (454)
Q Consensus 51 ~~~p~~v~l~~~------~~~~~~v~W~t~~~~~----~~~v~y~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 119 (454)
...|..+.+... ..+++.|.|..+.... .-.|+|. ..+...+..+.. .....+.+.|.+
T Consensus 203 p~pP~~~~~~~~~~~~~~~~~~l~l~W~~p~~~~~~~l~Y~v~y~~~~~~~~w~~~~~----------~~~~~~~~~l~~ 272 (313)
T 2d9q_B 203 LEPPMLRTMDPSPEAAPPQAGCLQLSWEPWQPGLHINQKCELRHKPQRGEASWALVGP----------LPLEALQYELCG 272 (313)
T ss_dssp CCCCEEEECCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSSCCCCEEEEE----------ECSCEEEEEECS
T ss_pred cCcCceeEEEEecccccCCCCeEEEEECCCCCCCceeEEEEEEEccCCCCCCcEEccc----------ccCcceEEEEeC
Confidence 345666665543 3578999999864221 3467776 443333322211 112346678999
Q ss_pred CCCCCEEEEEeCc-----------cCceeEEECCC
Q 012895 120 LEPATTYYYRCGG-----------RGPEFSFKMPP 143 (454)
Q Consensus 120 L~p~t~Y~Yrv~~-----------~s~~~~F~T~p 143 (454)
|+|+|.|.+||.. +|....|+|+.
T Consensus 273 L~p~t~Y~~rVra~~~~g~G~wS~wS~~~~~~T~~ 307 (313)
T 2d9q_B 273 LLPATAYTLQIRCIRWPLPGHWSDWSPSLELRTTE 307 (313)
T ss_dssp CCSCCCEEEEEEEEECSSCCCCCCCCCCEEECCCC
T ss_pred CCCCCeEEEEEEeeECCCCCccCCCCCccceeCCc
Confidence 9999999999862 24556777765
|
| >1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=90.77 E-value=0.63 Score=36.88 Aligned_cols=79 Identities=10% Similarity=0.108 Sum_probs=46.3
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCC--CCC----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCC
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDD--KEA----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPAT 124 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~--~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 124 (454)
...|..+.+.. ..+++.|.|.-.. ... .-.|.|............ ... +.+.+. |+|++
T Consensus 19 ~~~P~~v~~~~-~~~si~l~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~~~-----------~~~--~~~~~~-L~~~t 83 (117)
T 1wj3_A 19 SQPPGNVVWNA-TDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQVLN-----------TNK--TSAELV-LPIKE 83 (117)
T ss_dssp CCCCCSCBCCE-ETTEEEEECCCCCCCSSSCCEEEEEEEEEESSCSSCEEEE-----------ESS--SEEEEE-CCCSS
T ss_pred CCCCccEEEEE-eCCEEEEEEcCCCccccCCceeEEEEEEEECCCCCCeEEe-----------CCC--cEEEEE-CCCCC
Confidence 34566555555 5678999998772 121 234556654432221111 111 245566 99999
Q ss_pred EEEEEeCc--------cCceeEEECCCC
Q 012895 125 TYYYRCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 125 ~Y~Yrv~~--------~s~~~~F~T~p~ 144 (454)
.|.+||.. .++...|+|...
T Consensus 84 ~Y~~~V~A~n~~G~Gp~S~~v~~~T~~~ 111 (117)
T 1wj3_A 84 DYIIEVKATTDGGDGTSSEQIRIPRITS 111 (117)
T ss_dssp CEEEEEEEEESSCCCCBCCCEEECCCCC
T ss_pred EEEEEEEEECCCccCCCCCCEEEEcCCC
Confidence 99999963 255677888653
|
| >3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=89.73 E-value=1.1 Score=38.95 Aligned_cols=84 Identities=17% Similarity=0.152 Sum_probs=48.2
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCC-Cc----cEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKE-AE----SVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~-~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
.|..+.+. ....++.+.|...... .. -.|+|...+...+....-.. . .........|.+|+|++.|.
T Consensus 116 ~p~~~~~~-~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~~~~---~----~~~~~~~l~i~~L~~~~~y~ 187 (215)
T 3mtr_A 116 SPSIDQVE-PYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDA---K----EASMEGIVTIVGLKPETTYA 187 (215)
T ss_dssp CCEEEEEE-EETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEEEEEH---H----HHHHHTEEEEECCCTTCEEE
T ss_pred CCcceEEE-EecceEEEEEecCCccCCCceEEEEEEEEECCCCccccccccc---c----cccccccEEECCCCCCCEEE
Confidence 45555443 2367889999855321 21 24677666543332221110 0 00011456789999999999
Q ss_pred EEeCc--------cCceeEEECCCC
Q 012895 128 YRCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 128 Yrv~~--------~s~~~~F~T~p~ 144 (454)
|||.. .+....|+|+|.
T Consensus 188 ~~~~A~N~~G~s~~S~~~~v~T~p~ 212 (215)
T 3mtr_A 188 VRLAALNGKGLGEISAASEFKTQPV 212 (215)
T ss_dssp EEEEEEESSCBCCCCCCEEEECCC-
T ss_pred EEEEEEeCCcccCcccceeeEeccc
Confidence 99953 356778999885
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=89.62 E-value=1.4 Score=45.58 Aligned_cols=68 Identities=15% Similarity=0.155 Sum_probs=47.3
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCC-C----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKE-A----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~-~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
.|..+.+.-.+.++++++|..+... + .-.||+...++..|..+. .+ .. -..+++||.||+.|.
T Consensus 12 pP~~P~v~~~~~~sv~L~W~~P~~DGgs~I~~Y~vE~~~~~~~~W~~v~-~~---------~~--t~~~V~~L~~g~~Y~ 79 (573)
T 3uto_A 12 PPRFPIIENILDEAVILSWKPPALDGGSLVTNYTIEKREAMGGSWSPCA-KS---------RY--TYTTIEGLRAGKQYE 79 (573)
T ss_dssp CCEEEEEEEECSSCEEEEEECCSCCSSSCCCEEEEEEEESSSCCCEEEE-EE---------SS--SEEEECCCCTTCEEE
T ss_pred cCCCCEEEEeeCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEec-cc---------cC--CEEEeCCCCCCCcEe
Confidence 4556667777789999999987422 2 246788877766665543 21 11 135689999999999
Q ss_pred EEeCc
Q 012895 128 YRCGG 132 (454)
Q Consensus 128 Yrv~~ 132 (454)
|||..
T Consensus 80 FRV~A 84 (573)
T 3uto_A 80 FRIIA 84 (573)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99963
|
| >3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=89.12 E-value=0.62 Score=46.43 Aligned_cols=74 Identities=7% Similarity=0.062 Sum_probs=49.5
Q ss_pred CCeEEEEEecCCCCCCh------HHHHHHhhcC-CCCeEeecCccccCCCC----------------hhhHHHHh-hhh-
Q 012895 146 FPIEFAIVGDLGQTEWT------NSTLDHVGSK-DYDVFLLPGDLSYADFQ----------------QPLWDSFG-RLV- 200 (454)
Q Consensus 146 ~~~~f~~igD~~~~~~~------~~~l~~i~~~-~pd~vl~~GDl~y~~~~----------------~~~~~~~~-~~~- 200 (454)
.++++++.+......++ .+.++.++.. +||.+|++|.+++.... ...++.++ ..+
T Consensus 146 ~~l~ivvAsGPyT~sdnl~yepL~~Ll~~v~~~~kPdvLIL~GPFvD~~hp~i~~G~~p~~~~~~~~~~t~~~lF~~~i~ 225 (460)
T 3flo_A 146 SSLKVIVTCGPYFANDNFSLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASGKLPNFPQFKTQPKTLDELFLKLFT 225 (460)
T ss_dssp SCEEEEEEESCCSCSSCCCCHHHHHHHHHCCCCCCCSEEEEESCSSBTTCHHHHHTCCCCCTTCSSCCSSHHHHHHHHTH
T ss_pred CCcEEEEEeCCccCCCccChHHHHHHHHHHHhccCCCEEEEecCcccccCcccccCcccccccccccccCHHHHHHHHHH
Confidence 67999999987654432 3566666664 89999999999976531 12333333 232
Q ss_pred ---hhhhcCCCeeecCCCcccC
Q 012895 201 ---EPYASSRPWMVTEGNHEIE 219 (454)
Q Consensus 201 ---~~l~~~~P~~~v~GNHD~~ 219 (454)
+.+...+.++.+||+||..
T Consensus 226 ~il~~l~~~t~VVlVPS~rD~~ 247 (460)
T 3flo_A 226 PILKTISPHIQTVLIPSTKDAI 247 (460)
T ss_dssp HHHTTSCTTSEEEEECCTTBTT
T ss_pred HHHHhccCCCEEEEeCCccccc
Confidence 3333346699999999995
|
| >1oww_A FN, fibronectin first type III module, CIG; fibronectin type III module, structural protein; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=89.05 E-value=2 Score=32.47 Aligned_cols=79 Identities=18% Similarity=0.272 Sum_probs=46.7
Q ss_pred CCCeeEEEEecC--CCcEEEEEEeCCCC--CccEEEEeecCCC-CceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEE
Q 012895 52 SDPQQVHISLAA--KDYIRVSWITDDKE--AESVVEYGKLPGR-YNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 52 ~~p~~v~l~~~~--~~~~~v~W~t~~~~--~~~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 126 (454)
.-|.|+.++-.. .++--|.|..+..+ ..-.+.|...... .+..+. -++....-+|+||+||..|
T Consensus 6 ~gpa~v~is~~~s~pdsh~iqW~~~s~s~I~eyiL~~R~k~~~g~Wke~~-----------Ip~h~nSYtI~GL~P~~~Y 74 (98)
T 1oww_A 6 SGPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKEAT-----------IPGHLNSYTIKGLKPGVVY 74 (98)
T ss_dssp CCCCEEECCCCSSCTTCEEEEEECCSSSCEEEEEEEEEETTCSSCCEEEE-----------ECSSCCEEEECSCCSSEEE
T ss_pred CcceEEEecCCCCCCCccceEEecCCCCCceEEEEEEEEcCCCCceeEEE-----------ecCccceEEEecCCCCcEE
Confidence 345566665544 67888899888532 2334445544332 122221 2334555679999999999
Q ss_pred EEEeCc-----cC--ceeEEEC
Q 012895 127 YYRCGG-----RG--PEFSFKM 141 (454)
Q Consensus 127 ~Yrv~~-----~s--~~~~F~T 141 (454)
.-+|-+ ++ ..|.|.|
T Consensus 75 E~qv~S~~ryG~~Evs~f~FtT 96 (98)
T 1oww_A 75 EGQLISIQQYGHQEVTRFDFTT 96 (98)
T ss_dssp EEEEEEEESSSCEEEEEEEEEE
T ss_pred EEEEEEeeccCcccceEEEEEe
Confidence 998853 11 2566765
|
| >3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A | Back alignment and structure |
|---|
Probab=88.37 E-value=0.49 Score=42.30 Aligned_cols=76 Identities=17% Similarity=0.305 Sum_probs=45.6
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
..|..+++...+.+++.|.|.-.... ..-.|+|.......... +...... ..........|++|+|++.|.
T Consensus 100 ~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~i~~L~p~t~Y~ 174 (234)
T 3f7q_A 100 SEPGRLAFNVVSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPI--GPMKKVL---VDNPKNRMLLIENLRESQPYR 174 (234)
T ss_dssp CCCCCCEEEECSSSCEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBS--SCCEECC---CSCTTCCEEEEECCCTTCCEE
T ss_pred CCCCccEEEEecCCEEEEEEcCCCCCCCceeEEEEEEEECCCCCCcc--CcceEEE---ecCCcceEEEeCCCCCCCeEE
Confidence 34777888877789999999876432 12366676554322110 0000000 011223456789999999999
Q ss_pred EEeCc
Q 012895 128 YRCGG 132 (454)
Q Consensus 128 Yrv~~ 132 (454)
++|..
T Consensus 175 ~~V~A 179 (234)
T 3f7q_A 175 YTVKA 179 (234)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99963
|
| >2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=87.66 E-value=0.97 Score=45.75 Aligned_cols=87 Identities=17% Similarity=0.224 Sum_probs=53.5
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCCCC----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEE
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDKEA----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 126 (454)
...|..+++.....+++.|.|..+.... .-.|+|.......+.. .. ... ....-.+.+.|.+|+|+|.|
T Consensus 387 P~PP~nl~v~~~s~~sl~LsW~pP~~~~g~~l~YeV~Yr~~~~~~w~~-~~---~~~---~~~~~~~~v~l~~L~P~T~Y 459 (488)
T 2q7n_A 387 PHDPTSLKVKDINSTVVTFSWYLPGNFTKINLLCQIEICKANSKKEVR-NA---TIR---GAEDSTYHVAVDKLNPYTAY 459 (488)
T ss_dssp CCCCEEEEEEECSTTCEEEEEEEEEECSSSEEEEEEEEBCTTSCCEEE-EE---EEE---CCEEEEEEEEECSCCSSCCB
T ss_pred CCCCeEEEEEecCCCEEEEEEeCCCCCCCcceEEEEEEEECCCCCceE-EE---EEe---cCCCcEEEEEeCCCCCCceE
Confidence 4567888887767889999999875322 2346666554322211 00 000 00113456789999999999
Q ss_pred EEEeCc----------cCceeEEECCCC
Q 012895 127 YYRCGG----------RGPEFSFKMPPA 144 (454)
Q Consensus 127 ~Yrv~~----------~s~~~~F~T~p~ 144 (454)
.+||.. +|+...|+|+++
T Consensus 460 ~~rVRA~~~g~G~WS~WS~~v~~~T~e~ 487 (488)
T 2q7n_A 460 TFRVRCSSKTFWKWSRWSDEKRHLTTEA 487 (488)
T ss_dssp BCCEEEEESSCSSCCCCCCCCCBCCCCC
T ss_pred EEEEEEEECCCCCCCCCcCCEeEECCCC
Confidence 999852 345567888763
|
| >3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* | Back alignment and structure |
|---|
Probab=87.59 E-value=2.7 Score=42.98 Aligned_cols=108 Identities=14% Similarity=0.186 Sum_probs=57.2
Q ss_pred cccCCCCCccccCCCCCCCCCeeEEEEecCCCcEEEEEEeCCCCC-----ccEEEEeecCCCCc-eEEEeEeEEEeeeee
Q 012895 34 YIRQPPRSVIQTPNKRSESDPQQVHISLAAKDYIRVSWITDDKEA-----ESVVEYGKLPGRYN-TVATGEHTSYQFFFY 107 (454)
Q Consensus 34 ~~r~~~~~~~~~~~~~~~~~p~~v~l~~~~~~~~~v~W~t~~~~~-----~~~v~y~~~~~~~~-~~~~~~~~~~~~~~~ 107 (454)
+.|.. .....++-.....+|..+. .....+++.|.|.-+.... .-.|+|........ ....+....+... .
T Consensus 318 ~~ra~-~d~~~~~ct~pPsaP~nl~-~~vs~tSv~LsW~pP~~~gG~~i~~Y~V~~~~~~~~~~~~~~c~~~~~~~~~-~ 394 (536)
T 3fl7_A 318 FFRAP-QDPASMPCTRPPSAPHYLT-AVGMGAKVELRWTPPQDSGGREDIVYSVTCEQCWPESGECGPCEASVRYSEP-P 394 (536)
T ss_dssp CBCCT-TCCTTSCCBCCCCCBSCEE-EECCTTSEEEEECCBSCCCSCSCCEEEEEEEEECC-CCCEEECCTTCEESSC-S
T ss_pred ccccC-CCccccccccCCCcccceE-EEecCCEEEEEEeCCcCCCCCceeEEEEEEEeccCCCCcccccCCCceEEEe-e
Confidence 44544 3333444445667787774 4455889999998765322 23555654321100 0000000111100 0
Q ss_pred ecCeEEEEEECCCCCCCEEEEEeCc-----------cCceeEEECCCC
Q 012895 108 KSGKIHHVKIGPLEPATTYYYRCGG-----------RGPEFSFKMPPA 144 (454)
Q Consensus 108 ~~~~~~~~~l~gL~p~t~Y~Yrv~~-----------~s~~~~F~T~p~ 144 (454)
...-...++|++|+|+|.|.+||.. .+....++|+|.
T Consensus 395 ~~~~~ts~tI~gL~P~T~Y~frV~A~N~~G~~sps~~s~~v~v~T~~~ 442 (536)
T 3fl7_A 395 HGLTRTSVTVSDLEPHMNYTFTVEARNGVSGLVTSRSFRTASVSINQT 442 (536)
T ss_dssp SSBCSSEEEEECCCTTCEEEEEEEEECTTGGGCSCCCEEEEEEECCSC
T ss_pred cCCccceeEeCCCCCCCEEEEEEEEEecCCCCCCCCccceeEEeeccc
Confidence 1122456789999999999999953 123456788664
|
| >1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A | Back alignment and structure |
|---|
Probab=86.87 E-value=0.97 Score=40.75 Aligned_cols=80 Identities=15% Similarity=0.178 Sum_probs=47.1
Q ss_pred CCCCeeEEEEecC--C----CcEEEEEEeCCCC--------CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEE
Q 012895 51 ESDPQQVHISLAA--K----DYIRVSWITDDKE--------AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVK 116 (454)
Q Consensus 51 ~~~p~~v~l~~~~--~----~~~~v~W~t~~~~--------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (454)
...|..+.++... . ..+.|.|..+... -.-.|+|.......+.... ......+.
T Consensus 131 p~pP~~l~~~~~~~s~~~~~~~l~lsW~~P~~~~~~~g~~~l~Yevry~~~~~~~w~~~~------------~~~~~~~~ 198 (236)
T 1axi_B 131 PDPPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETKWKMMD------------PILTTSVP 198 (236)
T ss_dssp CCCCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTCSSCEECC------------CBSSSEEE
T ss_pred cCCCcccEEEEEecccCCCCceEEEEECCCCCccccCCceeeEEEEEEEECCCCceEEEe------------ccCCCEEE
Confidence 4467777655433 2 3489999988532 1235666655432222111 01124567
Q ss_pred ECCCCCCCEEEEEeCc----------cCceeEEECC
Q 012895 117 IGPLEPATTYYYRCGG----------RGPEFSFKMP 142 (454)
Q Consensus 117 l~gL~p~t~Y~Yrv~~----------~s~~~~F~T~ 142 (454)
|.+|+||+.|..||.. +|....|+||
T Consensus 199 l~~L~p~t~Y~vqVRa~~~~gg~ws~WS~~~~~~~p 234 (236)
T 1axi_B 199 VYSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTLP 234 (236)
T ss_dssp EEEEETTSCEEEEEEEEETTSSCCCCCCCCEEECCC
T ss_pred EeccCCCCEEEEEEEEEECCCCCcCCCCCCEEEECC
Confidence 8899999999999963 2455667665
|
| >2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=86.79 E-value=0.82 Score=39.57 Aligned_cols=66 Identities=17% Similarity=0.174 Sum_probs=38.7
Q ss_pred EEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEeCc
Q 012895 57 VHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCGG 132 (454)
Q Consensus 57 v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv~~ 132 (454)
+.+.....+++.|.|.-.... ..-.|+|........... .. ..+-...+.|+||+|++.|.++|..
T Consensus 118 l~~~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~------~~----v~~~~~~~~i~~L~p~t~Y~~~V~A 184 (201)
T 2ha1_A 118 ESVTEITASSFVVSWVSASDTVSGFRVEYELSEEGDEPQY------LD----LPSTATSVNIPDLLPGRKYIVNVYQ 184 (201)
T ss_dssp SSCCCCCSCCEEEECCCSCTTEEEEEEEEEETTTCCCCEE------EE----EETTCCEEEECSCCTTCEEEEEEEE
T ss_pred eEEEecCCCeEEEEEeCCCCCccEEEEEEEECCCCCceeE------EE----cCCceeEEEeCCCCCCCEEEEEEEE
Confidence 344444578999999776432 223566764322111100 00 1122345789999999999999864
|
| >1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=86.19 E-value=3 Score=43.85 Aligned_cols=78 Identities=13% Similarity=0.224 Sum_probs=44.3
Q ss_pred CCCCCeeEEEEec--CCC---cEEEEEEeCCCCC----ccEEEEeec-CCCCceEEEeEeEEEeeeeeecCeEEEEEECC
Q 012895 50 SESDPQQVHISLA--AKD---YIRVSWITDDKEA----ESVVEYGKL-PGRYNTVATGEHTSYQFFFYKSGKIHHVKIGP 119 (454)
Q Consensus 50 ~~~~p~~v~l~~~--~~~---~~~v~W~t~~~~~----~~~v~y~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 119 (454)
....|..+.+... ..+ ++.|.|.-+.... .-.|+|... ....... ........ ..+-...++|++
T Consensus 266 pp~~P~~l~~~~~~~~~~g~~sv~l~W~pP~~~~g~i~~Y~V~~~~~~~~~~~~~-~~~~~~~~----v~~~~~~~~l~~ 340 (680)
T 1zlg_A 266 APPAPANLRLANSTVNSDGSVTVTIVWDLPEEPDIPVHHYKVFWSWMVSSKSLVP-TKKKRRKT----TDGFQNSVILEK 340 (680)
T ss_pred CCCCCCceEeeeeeecCCCceEEEEEecCCCCCCCceeEEEEEEEecccccccCC-ccceEEEE----EcCCeeEEEeCC
Confidence 4557788888776 566 9999999654222 234556521 1000000 00000000 123346688999
Q ss_pred CCCCCEEEEEeCc
Q 012895 120 LEPATTYYYRCGG 132 (454)
Q Consensus 120 L~p~t~Y~Yrv~~ 132 (454)
|+|+|.|.+||..
T Consensus 341 L~p~t~Y~~~V~A 353 (680)
T 1zlg_A 341 LQPDCDYVVELQA 353 (680)
T ss_pred CCCCCEEEEEEEE
Confidence 9999999999963
|
| >3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=86.06 E-value=1.8 Score=37.87 Aligned_cols=72 Identities=13% Similarity=0.128 Sum_probs=39.6
Q ss_pred CCCCeeEEEEec-CCCcEEEEEEeCCCCC---ccEEEEeecCC-CCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCE
Q 012895 51 ESDPQQVHISLA-AKDYIRVSWITDDKEA---ESVVEYGKLPG-RYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATT 125 (454)
Q Consensus 51 ~~~p~~v~l~~~-~~~~~~v~W~t~~~~~---~~~v~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 125 (454)
...|..+++... ..+.+.|.|..+..+. .-.|+|..... ..+..... ...-...+.|.+|+|||.
T Consensus 110 p~pP~~l~v~~~~~~~~l~l~W~~P~~~~~~l~yev~y~~~~~~~~w~~~~~----------~~~~~~~~~l~~L~p~t~ 179 (206)
T 3v6o_A 110 PLPPSSVKAEITINIGLLKISWEKPVFPENNLQFQIRYGLSGKEVQWKMYEV----------YDAKSKSVSLPVPDLCAV 179 (206)
T ss_dssp CCCCCSCEEEEETTTTEEEEEC--------CEEEEEEEEESSSSCCCEEEEE----------CC---CEEEECCSCTTSC
T ss_pred CCCCCceEeEEecCCCeEEEEECCCCCCCCcEEEEEEEEECCCCCceEEEec----------ccCcceeEEeecCCCCCE
Confidence 345666677665 4789999999875321 34566765542 12222111 011123577899999999
Q ss_pred EEEEeCc
Q 012895 126 YYYRCGG 132 (454)
Q Consensus 126 Y~Yrv~~ 132 (454)
|..||..
T Consensus 180 Y~vqVRa 186 (206)
T 3v6o_A 180 YAVQVRC 186 (206)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999864
|
| >3tgx_A Interleukin-21 receptor; class I cytokine, class I cytokine receptor, sugarbridge, fibronectine domain, signaling, cytokine-cytokine receptor; HET: MAN FUL NAG BMA FUC; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=85.55 E-value=2.7 Score=37.32 Aligned_cols=85 Identities=11% Similarity=0.166 Sum_probs=51.8
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCCC---------CccEEEEeecCCCCceEE-EeEeEEEeeeeeecCeEEEEEECCC
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDKE---------AESVVEYGKLPGRYNTVA-TGEHTSYQFFFYKSGKIHHVKIGPL 120 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~~---------~~~~v~y~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~gL 120 (454)
...|..+.+.. .+.+.|.|..+... -.-.|+|..... .+..+ .... . ........+.+.+|
T Consensus 101 p~PP~nltv~~--~~~l~lsW~~P~~~p~~~~~~~~L~Yevryr~~~~-~W~~~~~~~~--~----~~~~~~~~~~~~~L 171 (219)
T 3tgx_A 101 PAPPFDVTVTF--SGQYQISWRSDYEDPAFYMLKGKLQYELQYRNRGD-PWAVSPRRKL--I----SVDSRSVSLLPLEF 171 (219)
T ss_dssp CCCCEEEEEEE--SSSEEEEEECGGGSGGGGGGTTSEEEEEEEEETTS-CTTSCCEEEE--E----CSSCSEEEECTTSS
T ss_pred eCCCCceEEEe--CCCEEEEEeCCcCCccccccccCEEEEEEEecCCC-Cceeccccee--E----ecCCCEEEEEeccC
Confidence 34566666763 46899999987431 134577776653 22111 1110 0 01234556778899
Q ss_pred CCCCEEEEEeCc--------------cCceeEEECCCC
Q 012895 121 EPATTYYYRCGG--------------RGPEFSFKMPPA 144 (454)
Q Consensus 121 ~p~t~Y~Yrv~~--------------~s~~~~F~T~p~ 144 (454)
.||+.|..||.. +|....|+|+++
T Consensus 172 ~p~t~Y~vqVRa~~~~g~~~~G~WSeWS~~~~~~T~~~ 209 (219)
T 3tgx_A 172 RKDSSYELQVRAGPMPGSSYQGTWSEWSDPVIFQTQSE 209 (219)
T ss_dssp CSSCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCC-
T ss_pred CCCCEEEEEEEEeeCCCCCCCCcCcCCCCCeEEECCch
Confidence 999999999842 256788999875
|
| >2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=85.35 E-value=2.5 Score=44.81 Aligned_cols=88 Identities=15% Similarity=0.144 Sum_probs=55.0
Q ss_pred CCCCCeeEEEEecCCCcEEEEEEeCCCC------CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCC
Q 012895 50 SESDPQQVHISLAAKDYIRVSWITDDKE------AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPA 123 (454)
Q Consensus 50 ~~~~p~~v~l~~~~~~~~~v~W~t~~~~------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~ 123 (454)
....|..+.+.....+++.|.|.-.... ..-.|+|.......+...... ... ...-...+.|++|+|+
T Consensus 359 p~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~~~~~~y~v~y~~~~~~~~~~~~~~--~~~----~~~~~~~~~i~~L~p~ 432 (731)
T 2v5y_A 359 PMRGPRKLEVVEVKSRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREEV--SWD----TENSHPQHTITNLSPY 432 (731)
T ss_dssp CSCCCEEEEEEEECSSCEEEEEECCCHHHHCSSSCEEEEEEEEESSSSEEEEEEE--ECC----SSCSSCEEEECSCCSS
T ss_pred CCCCCceeEEEeccCCeEEEEEECCCcccccceeeeEEEEEEEccCCCCccceeE--EEE----ecCCcceEEECCCCCC
Confidence 3467888888877889999999886321 134577776543221111100 001 1223445789999999
Q ss_pred CEEEEEeCc-------cCceeEEECCC
Q 012895 124 TTYYYRCGG-------RGPEFSFKMPP 143 (454)
Q Consensus 124 t~Y~Yrv~~-------~s~~~~F~T~p 143 (454)
|.|.+||.. .+....++|++
T Consensus 433 t~Y~~~V~A~n~~G~s~S~~~~~~T~~ 459 (731)
T 2v5y_A 433 TNVSVKLILMNPEGRKESQELIVQTDE 459 (731)
T ss_dssp CEEEEEEEEECSSCEEECCCEEEECCC
T ss_pred CEEEEEEEEEcCCCCCCCceEEEEccC
Confidence 999999863 24566788754
|
| >3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A | Back alignment and structure |
|---|
Probab=85.33 E-value=4.2 Score=37.04 Aligned_cols=73 Identities=12% Similarity=0.166 Sum_probs=43.1
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCC-CCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEe
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDK-EAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRC 130 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv 130 (454)
..|..+++...+ +++.|+|.-... ...-.|+|........... .+.. ....-.....+++|+|++.|.+||
T Consensus 103 ~p~~~~~~~~~~-~si~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~-----~~~~--~~~~~~~~~~~~~L~p~t~Y~~~V 174 (290)
T 3l5i_A 103 HPVMDLKAFPKD-NMLWVEWTTPRESVKKYILEWCVLSDKAPCIT-----DWQQ--EDGTVHRTYLRGNLAESKCYLITV 174 (290)
T ss_dssp CCCEEEEEEEET-TEEEEEEECCSSCCCEEEEEEEEECSSSCCCC-----EEEE--EETTCSEEECCSCCCTTCEEEEEE
T ss_pred CccceeEEEeCC-CeEEEEEeCCCCCCCcEEEEEEECCCCCCCCc-----CeEE--ccCCCcceEEecCcCCccEEEEEE
Confidence 344556655544 699999998754 2345677776544311000 0000 012234456789999999999999
Q ss_pred Cc
Q 012895 131 GG 132 (454)
Q Consensus 131 ~~ 132 (454)
..
T Consensus 175 ~A 176 (290)
T 3l5i_A 175 TP 176 (290)
T ss_dssp EE
T ss_pred EE
Confidence 63
|
| >1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A | Back alignment and structure |
|---|
Probab=84.99 E-value=1.8 Score=37.74 Aligned_cols=71 Identities=6% Similarity=0.042 Sum_probs=44.1
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCCCC---ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCC-CCCCEE
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDKEA---ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPL-EPATTY 126 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL-~p~t~Y 126 (454)
...|..+.+...+.+++.++|....... .-.|+|........ .+. ....-...+.|.+| .|++.|
T Consensus 8 P~~P~~l~~~~~~~~sv~l~W~~p~~~~~~~~Y~v~~~~~~~~~~-----~~~------~~~~~~~~~~i~~L~~~~t~Y 76 (215)
T 1bqu_A 8 PEKPKNLSCIVNEGKKMRCEWDGGRETHLETNFTLKSEWATHKFA-----DCK------AKRDTPTSCTVDYSTVYFVNI 76 (215)
T ss_dssp CCCCEEEEEEEETTSCCEEEEECCSCCSSCCEEEEEEEETTEECC-----CEE------CCSSCTTEEECSSCCCTTSCE
T ss_pred CCCCEeeEeEECCCCcEEEEcCCCCCCCCCceEEEEEEEcCCCcc-----ccc------cccCCcceEEEcCCccccccE
Confidence 4567777777666789999999875432 33555544321100 000 01222356789999 999999
Q ss_pred EEEeCc
Q 012895 127 YYRCGG 132 (454)
Q Consensus 127 ~Yrv~~ 132 (454)
.+||..
T Consensus 77 ~~~V~A 82 (215)
T 1bqu_A 77 EVWVEA 82 (215)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999964
|
| >3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens} | Back alignment and structure |
|---|
Probab=84.38 E-value=3.8 Score=35.66 Aligned_cols=77 Identities=18% Similarity=0.202 Sum_probs=45.4
Q ss_pred CeeEEEEecCCCcEEEEEEeCCCC--------------CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECC
Q 012895 54 PQQVHISLAAKDYIRVSWITDDKE--------------AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGP 119 (454)
Q Consensus 54 p~~v~l~~~~~~~~~v~W~t~~~~--------------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 119 (454)
|-.|++... .+++.|.|..+..+ -.-.|.|...+......... . ...+.|.+
T Consensus 96 PP~v~~~~~-~~si~v~w~~P~~~~~~~~~~~~~~~~~l~Y~v~y~~~~~~~~~~~~~----------~---~~~~~l~~ 161 (201)
T 3lqm_A 96 PPGMQVEVL-ADCLHMRFLAPKIENEYETWTMKNVYNSWTYNVQYWKQGTDEKFQITP----------Q---YDFEVLRN 161 (201)
T ss_dssp CCEEEEEEE-TTEEEEEEECCEEECSSCEEEHHHHCTTCEEEEEEEETTCCCCEEECC----------S---SSEEEECS
T ss_pred CCEEEEEEe-CCEEEEEEcCCCccCCCcccCHHHhCCceEEEEEEEECCCCcEEEEEe----------c---CceEEEec
Confidence 335776433 67999999876411 12345565543322211110 1 12478999
Q ss_pred CCCCCEEEEEeCc----------cCceeEEECCCC
Q 012895 120 LEPATTYYYRCGG----------RGPEFSFKMPPA 144 (454)
Q Consensus 120 L~p~t~Y~Yrv~~----------~s~~~~F~T~p~ 144 (454)
|+|+|.|..+|.. .|+...|+|.+.
T Consensus 162 L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~~ 196 (201)
T 3lqm_A 162 LEPWTTYCVQVRGFLPDRNKAGEWSEPVCEQTTHD 196 (201)
T ss_dssp CCTTCEEEEEEEEEETTTTEECCCCCCEEEECCCG
T ss_pred CCCCCcEEEEEEEEeccCCCCCCcCCCEeEEeCCC
Confidence 9999999999853 245566777653
|
| >1iar_B Protein (interleukin-4 receptor alpha chain); cytokine receptor,interleukin-4, cytokine/receptor complex; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_B* 3bpn_B* 3bpo_B* | Back alignment and structure |
|---|
Probab=84.36 E-value=3.8 Score=35.83 Aligned_cols=86 Identities=9% Similarity=0.066 Sum_probs=43.7
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCCC-------CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCC
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDKE-------AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPA 123 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~~-------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~ 123 (454)
...|..+.+....+....|.|..+... -.-.|+|....+..... .... ........+.+.+|.||
T Consensus 98 p~PP~nl~~~~~~~~~l~l~W~~p~~~~~~~~~~L~yev~y~~~~~~~~~~-~~~~-------~~~~~~~~~~~~~L~p~ 169 (207)
T 1iar_B 98 PRAPGNLTVHTNVSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFR-IYNV-------TYLEPSLRIAASTLKSG 169 (207)
T ss_dssp CCCCEEEEEC----CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSCSCEE-EEEE-------CSSCCEEEECC-----C
T ss_pred cCCCCCeEEEEccCCCEEEEECCCCCccccccccEEEEEEEccCCCchhhe-eeee-------ecCCcEEEEEHHHCCCC
Confidence 456677777754456899999987421 12467777654322211 1110 02234555667799999
Q ss_pred CEEEEEeCc-----------cCceeEEECCCC
Q 012895 124 TTYYYRCGG-----------RGPEFSFKMPPA 144 (454)
Q Consensus 124 t~Y~Yrv~~-----------~s~~~~F~T~p~ 144 (454)
+.|..||.. +|....|+|+++
T Consensus 170 ~~Y~vqVR~k~~~~~G~WSeWS~~~~~~t~~~ 201 (207)
T 1iar_B 170 ISYRARVRAWAQAYNTTWSEWSPSTKWHNSYR 201 (207)
T ss_dssp CCEEEEEEEECGGGTCCCCCCCCCEEEC----
T ss_pred CEEEEEEEEecCCCCCCCCCCCcCeEEECCCC
Confidence 999999862 456778888653
|
| >1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A | Back alignment and structure |
|---|
Probab=84.06 E-value=3.3 Score=38.90 Aligned_cols=70 Identities=13% Similarity=0.117 Sum_probs=45.2
Q ss_pred CCCCeeEEEEecC--CCcEEEEEEeCCCC------CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCC
Q 012895 51 ESDPQQVHISLAA--KDYIRVSWITDDKE------AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEP 122 (454)
Q Consensus 51 ~~~p~~v~l~~~~--~~~~~v~W~t~~~~------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p 122 (454)
...|..+.+.... .+++.|+|...... -.-.|+|.......+..+.. ......+.|.+|+|
T Consensus 197 P~pP~~l~v~~~~~~~~sv~lsW~~p~~~~~~~~~~~Y~V~yr~~~~~~W~~~~~-----------~~~~~~~~l~~L~p 265 (325)
T 1n26_A 197 PDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWMV-----------KDLQHHCVIHDAWS 265 (325)
T ss_dssp CCCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCCEEEEC-----------GGGCSEEEESSCCT
T ss_pred CCCCcceEEEEecCCCCEEEEEECCCCccCCCcEeEEEEEEEEeCCCCCCEEEcc-----------cCCceEEEEeCCCC
Confidence 3567788887754 46999999987531 12356776654333322211 11224567899999
Q ss_pred CCEEEEEeC
Q 012895 123 ATTYYYRCG 131 (454)
Q Consensus 123 ~t~Y~Yrv~ 131 (454)
++.|.+||.
T Consensus 266 ~t~Y~~rVr 274 (325)
T 1n26_A 266 GLRHVVQLR 274 (325)
T ss_dssp TCCEEEEEE
T ss_pred CCeEEEEEE
Confidence 999999996
|
| >2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A | Back alignment and structure |
|---|
Probab=83.78 E-value=12 Score=35.32 Aligned_cols=81 Identities=23% Similarity=0.263 Sum_probs=49.2
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC-Cc----cEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE-AE----SVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~-~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 126 (454)
..|..+.+.....+++.|.|...... +. -.|+|...+...+.... ..+......|.+|+|++.|
T Consensus 197 ~~P~~~~~~~~~~~~~~l~w~~p~~~~g~pi~~y~v~~~~~~~~~~~~~~-----------~~~~~~~~~i~~l~~~~~y 265 (389)
T 2jll_A 197 SSPYGVKIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVASEIWKIVR-----------SHGVQTMVVLNNLEPNTTY 265 (389)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSCCTTSCEEEEEEEEEETTCSCCEEEE-----------CSTTCSEEEECSCCTTCEE
T ss_pred CCCcceEEeeccCCEEEEEEeCCCCCCCcceEEEEEEEEECCCcccEEee-----------ccCCcceEEECCccCCCEE
Confidence 35556666666678999999854321 21 24566655433222111 1222345678999999999
Q ss_pred EEEeCc--------cCceeEEECCC
Q 012895 127 YYRCGG--------RGPEFSFKMPP 143 (454)
Q Consensus 127 ~Yrv~~--------~s~~~~F~T~p 143 (454)
.|+|.. .+....|+|.+
T Consensus 266 ~~~v~A~N~~G~~~~s~~~~~~t~~ 290 (389)
T 2jll_A 266 EIRVAAVNGKGQGDYSKIEIFQTLP 290 (389)
T ss_dssp EEEEEEEESSCBCCCCCCEEEECCC
T ss_pred EEEEEEEcCCccCCCCcceEEEecC
Confidence 999853 24456777744
|
| >4doh_B Interleukin-20 receptor subunit beta; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=83.46 E-value=2.3 Score=37.34 Aligned_cols=70 Identities=11% Similarity=0.075 Sum_probs=43.6
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCCCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEeC
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKEAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCG 131 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv~ 131 (454)
..|-.+.|. .+.+++.|.|......-.-.|.|+..+........ .. . .....+.|.+|+|+|.|..+|.
T Consensus 110 i~PP~v~v~-~~~~~i~V~~~~p~~~l~Y~v~y~~~~~~~~~~~~----~~-----~-~~~~~~~i~~L~p~t~Ycv~Vr 178 (206)
T 4doh_B 110 LTRPGMEIT-KDGFHLVIELEDLGPQFEFLVAYWRREPGAEEHVK----MV-----R-SGGIPVHLETMEPGAAYCVKAQ 178 (206)
T ss_dssp CCCCCEEEE-EETTEEEEEECCCCTTCEEEEEEEESSSSCCCEEE----EE-----C-CSSSEEEEEECCSSSCEEEEEE
T ss_pred cCCCeEEEE-eCCCEEEEEecCCCCcEEEEEEEEEcCCCceeEEe----EE-----c-cCCeEEEEeCCCCCCcEEEEEE
Confidence 445557776 45889999998653333556778776543221110 00 0 0123477999999999999986
Q ss_pred c
Q 012895 132 G 132 (454)
Q Consensus 132 ~ 132 (454)
.
T Consensus 179 a 179 (206)
T 4doh_B 179 T 179 (206)
T ss_dssp E
T ss_pred E
Confidence 3
|
| >2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C* | Back alignment and structure |
|---|
Probab=83.30 E-value=4.4 Score=35.07 Aligned_cols=70 Identities=13% Similarity=0.215 Sum_probs=46.1
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCCC--CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDKE--AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
...|..+++.......+.|.|..+... -.-.|+|....+..+...... ......|.+|.|++.|..
T Consensus 99 P~pP~~l~~~~~~~~~l~l~W~~p~~~~~l~yev~y~~~~~~~w~~~~~~------------~~~~~~l~~l~p~~~Y~v 166 (199)
T 2b5i_C 99 PWAPENLTLHKLSESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQSVD------------YRHKFSLPSVDGQKRYTF 166 (199)
T ss_dssp CCCCEEEEEEEEETTEEEEEEECSSCSTTCEEEEEEEETTCSSCEEEEEC------------SSCEEEECSCCTTSCEEE
T ss_pred cCCCcEEEEEECCCCCEEEEECCCCCCCceEEEEEEeecCCcccEEEecc------------CceEEEecCCCCCcEEEE
Confidence 446777778776667899999998521 234688877544333322111 123456789999999999
Q ss_pred EeCc
Q 012895 129 RCGG 132 (454)
Q Consensus 129 rv~~ 132 (454)
||..
T Consensus 167 qVR~ 170 (199)
T 2b5i_C 167 RVRS 170 (199)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9864
|
| >3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C* | Back alignment and structure |
|---|
Probab=82.12 E-value=5.9 Score=36.85 Aligned_cols=81 Identities=15% Similarity=0.054 Sum_probs=44.9
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCCCC----ccEEEEeecCCCCceEEEeEeEE--EeeeeeecCeEEEEEECCCCCCC
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDKEA----ESVVEYGKLPGRYNTVATGEHTS--YQFFFYKSGKIHHVKIGPLEPAT 124 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~gL~p~t 124 (454)
...|..+++. ...+++.|+|..+.... .-.|+|.......+......... .............+.|.+|+|+|
T Consensus 200 P~pP~~l~~~-~~~~~l~lsW~~P~~~~~~~l~Yev~y~~~~~~~w~~~~~~~~~c~~~~~~~~~~~~~~~~l~~L~p~t 278 (314)
T 3bpo_C 200 PDPPHIKNLS-FHNDDLYVQWENPQNFISRCLFYEVEVNNSQTETHNVFYVQEAKCENPEFERNVENTSCFMVPGVLPDT 278 (314)
T ss_dssp CCCCEEEEEE-EETTEEEEEEECCTTCCGGGEEEEEEEEC--CCCEEEEEESCCCCCCTTSSCCCSSEEEEEEESCCTTS
T ss_pred eCCCCEEEEE-EcCCcEEEEEeCCCccCCceEEEEEEEEECCCCcceEEecccccccccccccccCCceEEEEccCCCCC
Confidence 4567778886 44679999999885322 23566765543322211100000 00000011235667899999999
Q ss_pred EEEEEeCc
Q 012895 125 TYYYRCGG 132 (454)
Q Consensus 125 ~Y~Yrv~~ 132 (454)
.|.+||..
T Consensus 279 ~Y~~qVra 286 (314)
T 3bpo_C 279 LNTVRIRV 286 (314)
T ss_dssp CEEEEEEE
T ss_pred EEEEEEEe
Confidence 99999864
|
| >3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=81.46 E-value=1 Score=45.38 Aligned_cols=86 Identities=13% Similarity=0.091 Sum_probs=52.8
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCCC----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEE
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDKE----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 126 (454)
...|..+++.....+++.|.|..+... -.-.|+|.......... .+... ....-.+.+.|.+|+|+|.|
T Consensus 382 P~PP~nl~v~~~~stsl~LsW~~P~~~~~~~L~YeVrYr~~~~~~~~~------~vsv~-~~~~~~~s~~l~~L~PgT~Y 454 (483)
T 3e0g_A 382 PHTPTSFKVKDINSTAVKLSWHLPGNFAKINFLCEIEIKKSNSVQEQR------NVTIQ-GVENSSYLVALDKLNPYTLY 454 (483)
T ss_dssp CCCCEEEEECCSSSSSCCEEEECCSCCTTSBCCCEEEEECSSSCCCEE------ECCCB-CCSSSBCCCCCCSCCSSSSC
T ss_pred CCCCeeeEEEEecCCeEEEEECCCCCCCCceEEEEEEEEECCCCCceE------EEEEe-ccCCceeEEEEeccCCCcEE
Confidence 356777777655578999999987532 23578887664322111 01100 00112345678999999999
Q ss_pred EEEeCc----------cCceeEEECCC
Q 012895 127 YYRCGG----------RGPEFSFKMPP 143 (454)
Q Consensus 127 ~Yrv~~----------~s~~~~F~T~p 143 (454)
..||.. +|+...|+|++
T Consensus 455 ~vrVRA~~~g~g~WSeWS~~~~f~T~E 481 (483)
T 3e0g_A 455 TFRIRCSTETFWKWSKWSNKKQHLTTE 481 (483)
T ss_dssp EEEEECCCSSCCCCCCCCCCCCCCCCC
T ss_pred EEEEEEeeCCCCCcCCCCCceeeECCC
Confidence 999863 24556777765
|
| >1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=81.29 E-value=3.4 Score=43.47 Aligned_cols=68 Identities=15% Similarity=0.230 Sum_probs=40.9
Q ss_pred CC-eeEEEEecCCCcEEEEEEeCCC----CCccEEEEeecCC--------CCceEEEeEeEEEeeeeeecCeEEEEEECC
Q 012895 53 DP-QQVHISLAAKDYIRVSWITDDK----EAESVVEYGKLPG--------RYNTVATGEHTSYQFFFYKSGKIHHVKIGP 119 (454)
Q Consensus 53 ~p-~~v~l~~~~~~~~~v~W~t~~~----~~~~~v~y~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 119 (454)
.| ..+.+.....+++.|.|..... +..-.|+|....+ ..+..+.. .....+.|++
T Consensus 162 ~P~~~l~v~~~~~~sv~l~W~pp~~~~~~~i~Y~V~~r~~~g~~~~~~~~~~w~~v~~------------~~~~~~~i~~ 229 (680)
T 1zlg_A 162 KPRKELRFTELQSGQLEVKWSSKFNISIEPVIYVVQRRWNYGIHPSEDDATHWQTVAQ------------TTDERVQLTD 229 (680)
T ss_pred cccccceEEeccCceEEEEEeCCCCCCCCCEEEEEEEEECCCCCcCccccCceEEEEe------------cCCCeEEeCC
Confidence 45 5666766668899999997621 1123556654421 01111110 1123467899
Q ss_pred CCCCCEEEEEeCc
Q 012895 120 LEPATTYYYRCGG 132 (454)
Q Consensus 120 L~p~t~Y~Yrv~~ 132 (454)
|+|+|.|.|||..
T Consensus 230 L~P~t~Y~frV~A 242 (680)
T 1zlg_A 230 IRPSRWYQFRVAA 242 (680)
T ss_pred CCCCCEEEEEEEE
Confidence 9999999999853
|
| >3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=80.46 E-value=0.85 Score=46.82 Aligned_cols=85 Identities=13% Similarity=0.178 Sum_probs=49.6
Q ss_pred CCCCeeEEEEec--CCCcEEEEEEeCCCC----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCC
Q 012895 51 ESDPQQVHISLA--AKDYIRVSWITDDKE----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPAT 124 (454)
Q Consensus 51 ~~~p~~v~l~~~--~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 124 (454)
...|..+.+... ..+++.|+|...... ..-.|+|.......+...... ..........|.+|+|+|
T Consensus 199 p~pP~~~~~~~~~~~~~~v~l~W~~p~~~~~~~~~Y~v~~~~~~~~~w~~~~~~--------~~~~~~~~~~i~~L~p~t 270 (589)
T 3l5h_A 199 PNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE--------DTASTRSSFTVQDLKPFT 270 (589)
T ss_dssp CCCCCSCEEECTTTCTTCEEEECCCCGGGGTSCEEEEEEEEETTCSCCBCCCTT--------SSCSCCSEEEECSCCSSC
T ss_pred cCCCceEEEEecCCCCCeEEEEeCCCCCCCeeeEEEEEEECCCCCCCcEEEccc--------cCcCceeEEEECCCCCCC
Confidence 345666777533 378999999876422 124566665543222211000 011223456789999999
Q ss_pred EEEEEeCc-----------cCceeEEECCC
Q 012895 125 TYYYRCGG-----------RGPEFSFKMPP 143 (454)
Q Consensus 125 ~Y~Yrv~~-----------~s~~~~F~T~p 143 (454)
.|.+||.. ++....|+|++
T Consensus 271 ~Y~~~V~a~~~~g~g~~S~~S~~~~~~T~~ 300 (589)
T 3l5h_A 271 EYVFRIRCMKEDGKGYWSDWSEEASGITYE 300 (589)
T ss_dssp CEEEEEEEEESSSCSCCCCCCCCBCCCCCC
T ss_pred EEEEEEEEEeCCCCCccCCCCCccccccCc
Confidence 99999963 13455677754
|
| >2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=80.40 E-value=7.3 Score=35.23 Aligned_cols=69 Identities=13% Similarity=0.218 Sum_probs=45.1
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCCCC--ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDKEA--ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~~~--~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
...|..+++.......+.|.|..+.... .-.|+|....+..+...... ......|.+|.|++.|..
T Consensus 137 P~PP~nl~v~~~~~~~l~l~W~~P~~~~~L~Yevry~~~~~~~W~~~~~~------------~~~~~~l~~L~p~~~Y~v 204 (247)
T 2erj_C 137 PWAPENLTLHKLSESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQSVD------------YRHKFSLPSVDGQKRYTF 204 (247)
T ss_dssp CCCCEEEEEEESSSSCEEEEEECSSCCTTEEEEEEEECSSCSSCEEEEEC------------SSCEEEESCCCTTSCEEE
T ss_pred eCCCCeEEEEECCCCcEEEEECCCCCCCcEEEEEEEeeCCCCCCEEEecC------------CceEEEecCCCCCCEEEE
Confidence 4467778887766778999999985211 23577876544333332211 123456789999999999
Q ss_pred EeC
Q 012895 129 RCG 131 (454)
Q Consensus 129 rv~ 131 (454)
||.
T Consensus 205 qVR 207 (247)
T 2erj_C 205 RVR 207 (247)
T ss_dssp EEE
T ss_pred EEE
Confidence 986
|
| >2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A | Back alignment and structure |
|---|
Probab=80.25 E-value=17 Score=35.34 Aligned_cols=84 Identities=21% Similarity=0.267 Sum_probs=49.5
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCCCC----------ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCC
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDKEA----------ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPL 120 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~~~----------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL 120 (454)
...|..|.+...+ +.+.|+|..+.... .-.|+|.... ..+..+... . .....+.+.+.+|
T Consensus 109 p~pP~~l~v~~~~-~~~~l~W~~p~~~~~~~~~~~~~l~Y~v~yr~~~-~~w~~~~~~----~----~~~~~~~~~~~~L 178 (419)
T 2gys_A 109 PPEPRDLQISTDQ-DHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQ-DSWEDAAIL----L----SNTSQATLGPEHL 178 (419)
T ss_dssp CCCCEEEEEEEET-TEEEEEEECCC-----CCSCGGGEEEEEEEEETT-SCSTTCEEE----E----ESSSEEEECTTTC
T ss_pred CCCCCceEEEecC-CeEEEEECCCccccccchhccCceEEEEEEccCC-CChhheeee----c----ccceEEEechhhc
Confidence 4567888888765 69999999875321 1356666554 222111110 0 1122333334499
Q ss_pred CCCCEEEEEeCc--------------cCceeEEECCCC
Q 012895 121 EPATTYYYRCGG--------------RGPEFSFKMPPA 144 (454)
Q Consensus 121 ~p~t~Y~Yrv~~--------------~s~~~~F~T~p~ 144 (454)
.|++.|..||.. +|....|+|++.
T Consensus 179 ~p~~~Y~~rVra~~~~g~~~~G~wS~WS~~~~~~t~~~ 216 (419)
T 2gys_A 179 MPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPG 216 (419)
T ss_dssp CTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCC
T ss_pred CCCCeEEEEEEEecCCCCCCCcccCCCCCceeeecccc
Confidence 999999999862 235577888765
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 454 | ||||
| d2qfra2 | 312 | d.159.1.1 (A:121-432) Plant purple acid phosphatas | 2e-78 | |
| d2qfra1 | 112 | b.1.12.1 (A:9-120) Purple acid phosphatase, N-term | 2e-28 | |
| d1xzwa1 | 119 | b.1.12.1 (A:1-119) Purple acid phosphatase, N-term | 1e-26 | |
| d1utea_ | 302 | d.159.1.1 (A:) Mammalian purple acid phosphatase { | 9e-18 | |
| d2nxfa1 | 320 | d.159.1.12 (A:3-322) Uncharacterized C17orf48 homo | 6e-07 | |
| d1uf3a_ | 228 | d.159.1.6 (A:) Hypothetical protein TT1561 {Thermu | 4e-06 | |
| d3d03a1 | 271 | d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ | 5e-05 | |
| d2hy1a1 | 256 | d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide pho | 8e-04 |
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 244 bits (623), Expect = 2e-78
Identities = 126/295 (42%), Positives = 166/295 (56%), Gaps = 18/295 (6%)
Query: 147 PIEFAIVGDLGQTEWTNSTLDH--VGSKDYDVFLLPGDLSYAD----FQQPLWDSFGRLV 200
P F ++GDLGQ+ +N+TL H + K L GDLSYAD WD++GR
Sbjct: 7 PYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFT 66
Query: 201 EPYASSRPWMVTEGNHEIESIPII-LPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAH 259
E + +PW+ T GNHEIE P I FK ++ R+ +PYE S S+S +YS A AH
Sbjct: 67 ERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAH 126
Query: 260 IIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNS 319
II+L SY+ + + QY WLK +L K+ R +TPW+ VL+H+P YN+ H EGE+MR
Sbjct: 127 IIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTK 186
Query: 320 MEELLYNARVDVVFAGHVHAYERFTRIYDNKA-----------DPCGPIYITIGDGGNRE 368
E +VDVVFAGHVHAYER R+ + D P+YITIGD GN
Sbjct: 187 FEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYG 246
Query: 369 GLALEFKEPKSPLSMFQESSFGHARLKILDETRAHWSWYRNNDSDAVIADEVRLE 423
+ +P+ S F+E+SFGH I + T AH+SW RN D AV AD V
Sbjct: 247 VIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFF 301
|
| >d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 112 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 106 bits (266), Expect = 2e-28
Identities = 36/94 (38%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 54 PQQVHISLAAKDY--IRVSWITDDKEAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGK 111
PQQVHI+ + +SW+T D+ S V Y +A G+ ++Y+FF Y SG
Sbjct: 19 PQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGKMSTYRFFNYSSGF 78
Query: 112 IHHVKIGPLEPATTYYYRCG--GRGPEFSFKMPP 143
IHH I L+ T YYY G FSF PP
Sbjct: 79 IHHTTIRKLKYNTKYYYEVGLRNTTRRFSFITPP 112
|
| >d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]} Length = 119 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Score = 101 bits (254), Expect = 1e-26
Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Query: 54 PQQVHISLAAKDY--IRVSWIT-DDKEAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSG 110
PQQVHI+ + + +SW T DK + V Y + A G +Y+++ Y S
Sbjct: 25 PQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKSQKRAMGTVVTYKYYNYTSA 84
Query: 111 KIHHVKIGPLEPATTYYYRCG--GRGPEFSFKMPP 143
IHH I LE T YYYR G +F F PP
Sbjct: 85 FIHHCTIKDLEYDTKYYYRLGFGDAKRQFWFVTPP 119
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Score = 81.4 bits (199), Expect = 9e-18
Identities = 48/312 (15%), Positives = 85/312 (27%), Gaps = 53/312 (16%)
Query: 147 PIEFAIVGDLG-----------QTEWTNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDS 195
+ F VGD G + + V + D L GD Y D
Sbjct: 4 ILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDK 63
Query: 196 ------FGRLVEPYASSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMP-----YEESG 244
+P + PW V GNH+ + A+ + RW P
Sbjct: 64 RFQETFEDVFSDPSLRNVPWHVLAGNHDHL-GNVSAQIAYSKISKRWNFPSPYYRLRFKI 122
Query: 245 SSSNLYYSFDIAGAHIIMLGSYTDFDED----------SAQYKWLKADLAKINRKKTPWI 294
SN+ + + + S + Q W+K LA
Sbjct: 123 PRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAAAKEDYVLVA 182
Query: 295 FVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPC 354
+ + A G + + LL +V GH H + D
Sbjct: 183 G-----HYPVWSIAEHGPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQYLQ-------DEN 230
Query: 355 GPIYITIGDGGNREGLALEFKEPKSPL----SMFQESSFGHARLKILDETRAHWSWYRNN 410
G ++ G G + ++ + + S G A ++I ++
Sbjct: 231 GLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVEI-TPKEMSVTYI--- 286
Query: 411 DSDAVIADEVRL 422
++ + +L
Sbjct: 287 EASGKSLFKTKL 298
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Score = 49.0 bits (115), Expect = 6e-07
Identities = 31/249 (12%), Positives = 59/249 (23%), Gaps = 60/249 (24%)
Query: 166 LDHVGSKDYDVFLLPGDLSYAD--FQQPLWDSFGRLVEPYAS-SRPWMVTEGNHEIESIP 222
+ + + GD+ + + ++ + S GNHE +
Sbjct: 42 VLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAELDACSVDVHHVWGNHEFYNFS 101
Query: 223 ---IILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSY------------- 266
++ A + G Y ++L +Y
Sbjct: 102 RPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESEK 161
Query: 267 ---------------------------------TDFDEDSAQYKWLKADLAKINRKKTPW 293
+ Q +WL A L + K+
Sbjct: 162 HTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQERV 221
Query: 294 IFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADP 353
+ + H P + + + L + V AGH H R T
Sbjct: 222 L-IFSHLPVHPCAADPICLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTDSS------ 274
Query: 354 CGPIYITIG 362
G +IT+
Sbjct: 275 -GAQHITLE 282
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} Length = 228 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Score = 45.5 bits (106), Expect = 4e-06
Identities = 23/195 (11%), Positives = 41/195 (21%), Gaps = 8/195 (4%)
Query: 151 AIVGDL-GQTEWTNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPW 209
+ G E + D L G+L D + P
Sbjct: 9 LATSNPMGDLEALEKFVKLAPDTGADAIALIGNL--MPKAAKSRDYAAFFRILSEAHLPT 66
Query: 210 MVTEGNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDF 269
G + + A + E+ + Y G I G +
Sbjct: 67 AYVPGPQDAPIWEYLREAANVELVHPEMRNVHETFTFWRGPYLVAGVGGEIADEGEPEEH 126
Query: 270 DEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARV 329
+ + L + K L H Y+ Q + + L+
Sbjct: 127 EALRYPAWVAEYRLKALWELKDYPKIFLFHTMPYHKGLNEQ-----GSHEVAHLIKTHNP 181
Query: 330 DVVFAGHVHAYERFT 344
+V
Sbjct: 182 LLVLVAGKGQKHEML 196
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Score = 42.8 bits (99), Expect = 5e-05
Identities = 21/177 (11%), Positives = 50/177 (28%), Gaps = 17/177 (9%)
Query: 173 DYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSR-PWMVTEGNHEIESIPIILPHAFKA 231
D ++ GD+ + + + S P + GNH+ ++ F
Sbjct: 41 RPDAVVVSGDIV----NCGRPEEYQVARQILGSLNYPLYLIPGNHDDKA-------LFLE 89
Query: 232 YNARWLMPYEESGSSSNLYYSFDIAGAHIIMLG-SYTDFDEDSAQYKWLKADLAKINRKK 290
Y ++N+ + D ++ + S + + + A++
Sbjct: 90 YLQPLCPQL--GSDANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEAQLFEGG 147
Query: 291 TPWIFVLLHAPWYNTNTAHQGEGESM--RNSMEELLYNARVDVVFAGHVHAYERFTR 345
+ +H P A + + + +F GH H+
Sbjct: 148 DKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMTQY 204
|
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 38.6 bits (88), Expect = 8e-04
Identities = 26/171 (15%), Positives = 46/171 (26%), Gaps = 16/171 (9%)
Query: 173 DYDVFLLPGDLS-YADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPIILPHAFKA 231
D + GDL+ + + GNH+
Sbjct: 45 RPDAIVFTGDLADKGEPAAYRKLRGLVEPFAAQLGAELVWVMGNHD-------------D 91
Query: 232 YNARWLMPYEESGSSSNLYYSFDIAGAHIIMLG-SYTDFDEDSAQYKWLKADLAKINRKK 290
+E+ S + L I G II+L S + L ++
Sbjct: 92 RAELRKFLLDEAPSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLGWLAEELATPA 151
Query: 291 TPWIFVLLHAPWYNTNT-AHQGEGESMRNSMEELLYNARVDVVFAGHVHAY 340
+ LH P + + ++ +L V + AGH+H
Sbjct: 152 PDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYS 202
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 454 | |||
| d2qfra2 | 312 | Plant purple acid phosphatase, catalytic domain {K | 100.0 | |
| d1utea_ | 302 | Mammalian purple acid phosphatase {Pig (Sus scrofa | 100.0 | |
| d2hy1a1 | 256 | Rv0805 cyclic nucleotide phosphodiesterase {Mycoba | 99.91 | |
| d3d03a1 | 271 | Glycerophosphodiesterase GpdQ {Enterobacter aeroge | 99.89 | |
| d2qfra1 | 112 | Purple acid phosphatase, N-terminal domain {Kidney | 99.87 | |
| d2nxfa1 | 320 | Uncharacterized C17orf48 homolog zgc:64213 {Zebraf | 99.86 | |
| d1xzwa1 | 119 | Purple acid phosphatase, N-terminal domain {Sweet | 99.84 | |
| d1uf3a_ | 228 | Hypothetical protein TT1561 {Thermus thermophilus | 99.71 | |
| d2yvta1 | 257 | Uncharacterized protein Aq_1956 {Aquifex aeolicus | 99.7 | |
| d1z2wa1 | 182 | Vacuolar protein sorting 29, VPS29 {Mouse (Mus mus | 99.38 | |
| d2a22a1 | 193 | Vacuolar protein sorting 29, VPS29 {Cryptosporidiu | 99.35 | |
| d1ii7a_ | 333 | Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 99.28 | |
| d1s3la_ | 165 | Putative phosphodiesterase MJ0936 {Methanococcus j | 99.2 | |
| d1nnwa_ | 251 | Hypothetical protein PF1291 {Archaeon Pyrococcus f | 99.18 | |
| d3ck2a1 | 173 | Uncharacterized protein SP1879 {Streptococcus pneu | 99.14 | |
| d1su1a_ | 184 | Phosphodiesterase yfcE {Escherichia coli [TaxId: 5 | 98.74 | |
| d1xm7a_ | 188 | Hypothetical protein aq_1666 {Aquifex aeolicus [Ta | 98.73 | |
| d1usha2 | 337 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.51 | |
| d3c9fa2 | 322 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.27 | |
| d2z1aa2 | 302 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 97.98 | |
| d1tdqa2 | 92 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 97.57 | |
| d1x5xa1 | 96 | Fibronectin type-III domain containing protein 3a, | 97.5 | |
| d2b5ib2 | 104 | Interleukin-2 receptor beta chain {Human (Homo sap | 97.46 | |
| d1x4xa1 | 93 | Fibronectin type-III domain containing protein 3a, | 97.39 | |
| d1qg3a1 | 92 | Integrin beta-4 subunit {Human (Homo sapiens) [Tax | 97.31 | |
| d2djsa1 | 95 | Ephrin type-B receptor 1 {Human (Homo sapiens) [Ta | 97.29 | |
| d2vkwa2 | 93 | Neural cell adhesion molecule 1, NCAM {Human (Homo | 97.29 | |
| d1x5fa1 | 107 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 97.26 | |
| d2ibga1 | 95 | Hedgehog receptor iHog {Fruit fly (Drosophila mela | 97.2 | |
| d1x5aa1 | 94 | Ephrin type-A receptor 1 {Mouse (Mus musculus) [Ta | 97.15 | |
| d1x5ka1 | 111 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 97.13 | |
| d1g5ba_ | 219 | lambda ser/thr protein phosphatase {Bacteriophage | 97.12 | |
| d1qr4a2 | 88 | Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | 97.09 | |
| d1tena_ | 90 | Tenascin {Human (Homo sapiens) [TaxId: 9606]} | 97.06 | |
| d1owwa_ | 93 | Fibronectin, different Fn3 modules {Human (Homo sa | 97.05 | |
| d1x5la1 | 98 | Ephrin type-A receptor 8 {Human (Homo sapiens) [Ta | 97.03 | |
| d1fnfa3 | 89 | Fibronectin, different Fn3 modules {Human (Homo sa | 97.01 | |
| d2cuha1 | 102 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 96.99 | |
| d1tdqa1 | 93 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 96.95 | |
| d1k85a_ | 88 | Fibronectin type III domain from chitinase A1. {Ba | 96.93 | |
| d2haza1 | 101 | Neural cell adhesion molecule 1, NCAM {Human (Homo | 96.9 | |
| d2cuma1 | 93 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 96.89 | |
| d1fnha2 | 90 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.88 | |
| d1iarb2 | 101 | Interleukin-4 receptor alpha chain {Human (Homo sa | 96.88 | |
| d1fnfa2 | 91 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.88 | |
| d1fnha1 | 90 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.88 | |
| d1x5za1 | 102 | Receptor-type tyrosine-protein phosphatase delta, | 96.87 | |
| d1x4ya1 | 101 | Brother of CDO precursor (BOC) {Mouse (Mus musculu | 96.84 | |
| d1qr4a1 | 87 | Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | 96.83 | |
| d1fnha3 | 89 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.81 | |
| d2b5ic1 | 95 | Cytokine receptor common gamma chain {Human (Homo | 96.81 | |
| d2gysa2 | 114 | Common beta-chain in the GM-CSF, IL-3 and IL-5 rec | 96.79 | |
| d1va9a1 | 109 | Down syndrome cell adhesion molecule-like protein | 96.76 | |
| d1cd9b2 | 106 | Granulocyte colony-stimulating factor (GC-SF) rece | 96.76 | |
| d2d9qb2 | 105 | Granulocyte colony-stimulating factor (GC-SF) rece | 96.74 | |
| d1x4za1 | 108 | Brother of CDO precursor (BOC) {Mouse (Mus musculu | 96.73 | |
| d1x5ga1 | 103 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.72 | |
| d1tdqa3 | 86 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 96.72 | |
| d1t70a_ | 255 | Putative phosphatase DR1281 {Deinococcus radiodura | 96.7 | |
| d2z06a1 | 252 | Hypothetical protein TTHA0625 {Thermus thermophilu | 96.65 | |
| d1t71a_ | 281 | Hypothetical protein MPN349 {Mycoplasma pneumoniae | 96.57 | |
| d1erna2 | 105 | Erythropoietin (EPO) receptor {Human (Homo sapiens | 96.57 | |
| d1x5ja1 | 100 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.52 | |
| d1uena_ | 125 | KIAA0343 protein {Human (Homo sapiens) [TaxId: 960 | 96.52 | |
| d1x5ya1 | 98 | Myosin binding protein C, fast-type {Mouse (Mus mu | 96.51 | |
| d1fnfa1 | 94 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.5 | |
| d2cuia1 | 101 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 96.46 | |
| d1f6fb2 | 103 | Prolactin receptor {Rat (Rattus norvegicus) [TaxId | 96.4 | |
| d1x5ha1 | 119 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.33 | |
| d2ic2a1 | 107 | Hedgehog receptor iHog {Fruit fly (Drosophila mela | 96.31 | |
| d3d48r2 | 104 | Prolactin receptor {Human (Homo sapiens) [TaxId: 9 | 96.31 | |
| d1j8ka_ | 94 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.3 | |
| d1v5ja_ | 108 | KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} | 96.24 | |
| d2crza1 | 97 | Fibronectin type-III domain containing protein 3a, | 96.23 | |
| d2fnba_ | 95 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.22 | |
| d1wf5a1 | 108 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 96.16 | |
| d1cfba1 | 100 | Neuroglian, two amino proximal Fn3 repeats {Drosop | 96.14 | |
| d1bpva_ | 104 | Type I titin module {Human (Homo sapiens) [TaxId: | 96.08 | |
| d1bqua2 | 115 | Cytokine receptor gp130 cytokine-binding domains { | 95.94 | |
| d1x3da1 | 105 | Fibronectin type-III domain containing protein 3a, | 95.92 | |
| d1cfba2 | 105 | Neuroglian, two amino proximal Fn3 repeats {Drosop | 95.82 | |
| d1uema_ | 117 | KIAA1568 protein {Human (Homo sapiens) [TaxId: 960 | 95.7 | |
| d1wfua_ | 120 | Fibronectin type 3 and ankyrin repeat domains 1 pr | 95.65 | |
| d2crma1 | 107 | Fibronectin type-III domain containing protein 3a, | 95.57 | |
| d1wisa1 | 111 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 95.53 | |
| d1qg3a2 | 103 | Integrin beta-4 subunit {Human (Homo sapiens) [Tax | 95.51 | |
| d1wk0a_ | 137 | Fibronectin type-III domain containing protein 3a, | 95.51 | |
| d1ueya_ | 127 | KIAA0343 protein {Human (Homo sapiens) [TaxId: 960 | 95.44 | |
| d1ujta_ | 120 | KIAA1568 protein {Human (Homo sapiens) [TaxId: 960 | 95.4 | |
| d1fnaa_ | 91 | Fibronectin, different Fn3 modules {Human (Homo sa | 95.38 | |
| d1wfoa1 | 117 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 95.36 | |
| d1n26a3 | 104 | Interleukin-6 receptor alpha chain, domains 2 and | 95.29 | |
| d2dn7a1 | 94 | Receptor-type tyrosine-protein phosphatase F, PTPR | 95.0 | |
| d1wfna1 | 106 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 94.92 | |
| d1x5ia1 | 113 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 94.91 | |
| d1cd9b1 | 107 | Granulocyte colony-stimulating factor (GC-SF) rece | 94.91 | |
| d1uc6a_ | 109 | Ciliary neurotrophic factor receptor alpha {Human | 94.55 | |
| d1axib2 | 106 | Growth hormone receptor {Human (Homo sapiens) [Tax | 94.54 | |
| d1wfta_ | 123 | Host cell factor 2, HCF-2 {Mouse (Mus musculus) [T | 94.26 | |
| d3c5wc1 | 288 | Protein phosphatase 2A catalytic subunit alpha iso | 93.38 | |
| d1jk7a_ | 294 | Protein phosphatase-1 (PP-1) {Human (Homo sapiens) | 93.36 | |
| d2dtge1 | 102 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 92.42 | |
| d1auia_ | 473 | Protein phosphatase-2B (PP-2B, calcineurin A subun | 92.36 | |
| d1s95a_ | 324 | Serine/threonine protein phosphatase 5, PP5 {Human | 92.3 | |
| d2gysa4 | 100 | Common beta-chain in the GM-CSF, IL-3 and IL-5 rec | 92.16 | |
| d1bqua1 | 95 | Cytokine receptor gp130 cytokine-binding domains { | 90.45 | |
| d2cspa1 | 117 | Rim binding protein 2 {Human (Homo sapiens) [TaxId | 90.0 | |
| d1fyhb1 | 98 | Interferon-gamma receptor alpha chain {Human (Homo | 89.6 | |
| d3d85d3 | 94 | The p40 domain of interleukin-12 (IL-12 beta chain | 87.52 | |
| d2dtge2 | 196 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 84.2 | |
| d1wj3a_ | 117 | Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxI | 83.91 | |
| d2dtge3 | 125 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 82.6 | |
| d1y6kr1 | 99 | Interleukin-10 receptor 1, IL-10R1 {Human (Homo sa | 81.12 |
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=100.00 E-value=4.6e-56 Score=430.90 Aligned_cols=286 Identities=44% Similarity=0.761 Sum_probs=248.4
Q ss_pred ECCCCCCCeEEEEEecCCCCCChHHHHHHh--hcCCCCeEeecCccccCCCC----hhhHHHHhhhhhhhhcCCCeeecC
Q 012895 140 KMPPANFPIEFAIVGDLGQTEWTNSTLDHV--GSKDYDVFLLPGDLSYADFQ----QPLWDSFGRLVEPYASSRPWMVTE 213 (454)
Q Consensus 140 ~T~p~~~~~~f~~igD~~~~~~~~~~l~~i--~~~~pd~vl~~GDl~y~~~~----~~~~~~~~~~~~~l~~~~P~~~v~ 213 (454)
+|.| +.|+||+++||+|......+++..+ ...+|||||++||++|+++. ..+|+.|++.++++...+|+++++
T Consensus 1 ~~g~-~~p~~F~v~GD~g~~~~~~~~~~~~~~~~~~pdfvl~~GDl~Y~~~~~~~~~~~wd~~~~~~~~~~~~~P~~~~~ 79 (312)
T d2qfra2 1 QTGL-DVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQPWIWTA 79 (312)
T ss_dssp CCCS-SCCEEEEEECSCCSBHHHHHHHHHHHHCSSCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTSCEEECC
T ss_pred CCCC-CCCEEEEEEeeCCCCCchHHHHHHHHHcCCCCCEEEECCCCCcCCCCcccchHHHHHHHHHHHHHhhcceEEEec
Confidence 3555 6899999999999877766676654 46789999999999986553 468999999999998889999999
Q ss_pred CCcccCCCCCC-CcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhccCCCC
Q 012895 214 GNHEIESIPII-LPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTP 292 (454)
Q Consensus 214 GNHD~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~ 292 (454)
||||+...+.. ....+..|..+|.+|.+......+.||+|++|+++||+||++..+..+.+|++||+++|+++++++++
T Consensus 80 GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~ 159 (312)
T d2qfra2 80 GNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETP 159 (312)
T ss_dssp CGGGTCCBGGGTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHTCCTTTCC
T ss_pred ccccccccccccccccccchhhhccCCccccCCCCCceEEEEECCEEEEEeeccccccchHHHHHHHHHHHHHHhhcCCC
Confidence 99998543321 13467788899999987666667889999999999999999988888899999999999998887889
Q ss_pred eEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCC-----------cCCCCcEEEEE
Q 012895 293 WIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNK-----------ADPCGPIYITI 361 (454)
Q Consensus 293 w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~-----------~~~~g~~yi~~ 361 (454)
|+||++|+|+|++...+......+|+.|+++|.+++||++|+||+|.|||++|+++++ .+++|++||++
T Consensus 160 w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~Vdlv~~GH~H~YeRt~p~~~~~~~~~~~~~~~~~~~~g~vyiv~ 239 (312)
T d2qfra2 160 WLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITI 239 (312)
T ss_dssp EEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCCCSCEECTTSCEEEEE
T ss_pred EEEEEccccccccCCCCcccchhHHHHHHHHHHHcCcEEEEEccCcceEEEeeccCCcccccCCccccccCCCcCEEEEE
Confidence 9999999999998776656667789999999999999999999999999999998764 24679999999
Q ss_pred CCCCCCCCcccccCCCCCCCceeeecccCEEEEEEecCCeEEEEEEEecCCCceeeeEEEEEEcC
Q 012895 362 GDGGNREGLALEFKEPKSPLSMFQESSFGHARLKILDETRAHWSWYRNNDSDAVIADEVRLESLS 426 (454)
Q Consensus 362 G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i~~~~ 426 (454)
|+||+.++....+..++|.|++|++.+|||++|+|.|.|+|.|+|+++.||+.++.|+|||.|..
T Consensus 240 G~gG~~~~~~~~~~~~~~~~s~~~~~~~G~~~l~v~n~t~l~~~~~~~~d~~~~~~D~~~i~~~~ 304 (312)
T d2qfra2 240 GDAGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFFNRH 304 (312)
T ss_dssp CCSCTTSCCCCCBCSSCCTTEEEEECCCEEEEEEECSSSEEEEEEEESSSCTTCCSEEEEEECTT
T ss_pred CcCCCcccccccccCCCCCeeEEEecCCCEEEEEEEcCCeEEEEEEECCCCCEEeeeEEEEEeCC
Confidence 99998877666777888999999999999999999999999999999999997777999999985
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=100.00 E-value=9.4e-33 Score=264.51 Aligned_cols=255 Identities=21% Similarity=0.280 Sum_probs=177.1
Q ss_pred CCeEEEEEecCCCCCCh-----------HHHHHHhhcCCCCeEeecCccccCCCC----hhhHHHHhhhh-h-hhhcCCC
Q 012895 146 FPIEFAIVGDLGQTEWT-----------NSTLDHVGSKDYDVFLLPGDLSYADFQ----QPLWDSFGRLV-E-PYASSRP 208 (454)
Q Consensus 146 ~~~~f~~igD~~~~~~~-----------~~~l~~i~~~~pd~vl~~GDl~y~~~~----~~~~~~~~~~~-~-~l~~~~P 208 (454)
..+||+++||+|..... ..+.+.+++.+|||||++||++|.++. ..+|....+.+ . .....+|
T Consensus 3 ~~~~F~vigD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfvl~~GD~vy~~g~~~~~~~~~~~~~~~~~~~~~~~~~P 82 (302)
T d1utea_ 3 PILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRNVP 82 (302)
T ss_dssp CCEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGTTCC
T ss_pred CCeEEEEEecCCCCCCcccccHHHHHHHHHHHHHHhhCCCCEEEECCCCCCCCCCCcccHHHHHHHHHHHhhhhhhcCCc
Confidence 57999999999865442 123344557899999999999987654 33444433221 2 2334699
Q ss_pred eeecCCCcccCCCCCCCcchhhhhhhhccCCCCCCCCCCCceEEEEe------CeEEEEEecccCC---------C----
Q 012895 209 WMVTEGNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDI------AGAHIIMLGSYTD---------F---- 269 (454)
Q Consensus 209 ~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~------g~v~fi~Lds~~~---------~---- 269 (454)
+++++||||+..+... ...+..+..++.+| ..||.+.+ ++++|+++|+... .
T Consensus 83 ~~~~~GNHD~~~~~~~-~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~ldt~~~~~~~~~~~~~~~~~ 153 (302)
T d1utea_ 83 WHVLAGNHDHLGNVSA-QIAYSKISKRWNFP--------SPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPER 153 (302)
T ss_dssp EEECCCHHHHHSCHHH-HHHGGGTSTTEECC--------SSSEEEEEECTTSSCEEEEEECCHHHHHCCGGGSTTCSCCS
T ss_pred eEEeeccccccccccc-ccchhhccccccCC--------CcccceeecccCCCCcEEEEEccceeEeecccccccccccc
Confidence 9999999998643220 01122333344444 34666654 3699999997310 0
Q ss_pred ----CCCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeeec
Q 012895 270 ----DEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTR 345 (454)
Q Consensus 270 ----~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~ 345 (454)
....+|++||+++|+++ +.+|+|+++|||+++.... ......+..|.++|.+++|+++||||+|.|+|+..
T Consensus 154 ~~~~~~~~~Q~~WL~~~L~~~---~~~~~iv~~h~~~~~~~~~--~~~~~~~~~~~~ll~~~~v~~~~~GH~H~~~r~~~ 228 (302)
T d1utea_ 154 PRNLALARTQLAWIKKQLAAA---KEDYVLVAGHYPVWSIAEH--GPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQYLQD 228 (302)
T ss_dssp CSCHHHHHHHHHHHHHHHHHC---CCSEEEEECSSCSSCCSSS--CCCHHHHHHTHHHHHHTTCSEEEECSSSSEEEEEC
T ss_pred cccchhHHHHHHHHHHHHHhh---ccCceEEEEeccccccCCC--CCchhhhhhhhHHHHhcCceEEEeCCCcceEEEec
Confidence 02368999999999987 5679999999999876542 33456789999999999999999999999999874
Q ss_pred ccCCCcCCCCcEEEEECCCCCCCCcccccCCCCCCCce----eeecccCEEEEEEecCCeEEEEEEEecCCCceeeeEEE
Q 012895 346 IYDNKADPCGPIYITIGDGGNREGLALEFKEPKSPLSM----FQESSFGHARLKILDETRAHWSWYRNNDSDAVIADEVR 421 (454)
Q Consensus 346 ~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~----~~~~~~G~~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~ 421 (454)
++++.||++|+||............+..... .....+||.+|+| +.+.++++|+. .+|+ ++|+++
T Consensus 229 -------~~~~~~i~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~~~v-~~~~l~~~~~~-~~G~--~~~~~~ 297 (302)
T d1utea_ 229 -------ENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVEI-TPKEMSVTYIE-ASGK--SLFKTK 297 (302)
T ss_dssp -------TTCCEEEEECBSSCCCCCCTTGGGSCTTCEEEEECCTTSCCEEEEEEE-CSSCEEEEEEE-TTSC--EEEEEE
T ss_pred -------CCccEEEEeCCCCCCCCCccccccCCCcccceeecccCCcceEEEEEE-ECCEEEEEEEe-CCCC--EEEEEE
Confidence 5688999999988754322222211111111 2235779999998 55799999987 4787 889999
Q ss_pred EEEc
Q 012895 422 LESL 425 (454)
Q Consensus 422 i~~~ 425 (454)
|.++
T Consensus 298 ~~~~ 301 (302)
T d1utea_ 298 LPRR 301 (302)
T ss_dssp ECCC
T ss_pred ecCC
Confidence 9876
|
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.91 E-value=1.5e-23 Score=195.95 Aligned_cols=224 Identities=17% Similarity=0.188 Sum_probs=140.6
Q ss_pred CCeEEEEEecCCCCCCh-------------HHHHHHhh--cCCCCeEeecCccccCCCChhhHHHHhhhhhhhhc--CCC
Q 012895 146 FPIEFAIVGDLGQTEWT-------------NSTLDHVG--SKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYAS--SRP 208 (454)
Q Consensus 146 ~~~~f~~igD~~~~~~~-------------~~~l~~i~--~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~--~~P 208 (454)
..|||++++|+|..... +++++.++ ..+|||||++||+++.+. ..+|+.+.+.++++.. .+|
T Consensus 3 ~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~pD~vl~~GDl~~~g~-~~~~~~~~~~l~~~~~~~~~p 81 (256)
T d2hy1a1 3 PDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGE-PAAYRKLRGLVEPFAAQLGAE 81 (256)
T ss_dssp CSEEEEEECCCCBC----------CHHHHHHHHHHHHHHHTCCCSEEEECSCCBSSCC-HHHHHHHHHHHHHHHHHHTCE
T ss_pred CCEEEEEEeeCccCCCCcccccCcCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCC-hhHHHHHHHHhhhhhhhcCCC
Confidence 57999999999974321 23455554 458999999999997554 4567777776665543 489
Q ss_pred eeecCCCcccCCCCCCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCC----CCCHHHHHHHHHHHH
Q 012895 209 WMVTEGNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDF----DEDSAQYKWLKADLA 284 (454)
Q Consensus 209 ~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~----~~~~~Q~~WL~~~L~ 284 (454)
+++++||||.. ..+..+ +.... ......+|.+..++++|++|||.... ....+|++||++.|+
T Consensus 82 ~~~v~GNHD~~-------~~~~~~---~~~~~---~~~~~~~~~~~~~~~~~~~ldt~~~~~~~g~~~~~~~~wl~~~L~ 148 (256)
T d2hy1a1 82 LVWVMGNHDDR-------AELRKF---LLDEA---PSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLGWLAEELA 148 (256)
T ss_dssp EEECCCTTSCH-------HHHHHH---TTCCC---CCCSCCCEEEEETTEEEEECCCBCTTCSSBCCCHHHHHHHHHHHT
T ss_pred EEEEcccccch-------hhhhhh---hcccc---ccccccceEEEecccceeeeeeeecCCcCCcccHHHHHHHHHHHH
Confidence 99999999962 222222 21111 11235678899999999999986432 245899999999998
Q ss_pred hhccCCCCeEEEEEccccccCCCCCC-CCcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCCcCCCCcEEEEECC
Q 012895 285 KINRKKTPWIFVLLHAPWYNTNTAHQ-GEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGD 363 (454)
Q Consensus 285 ~~~~~~~~w~Iv~~H~P~~~~~~~~~-~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G~ 363 (454)
+... +.+||++|||++....... .......+.+.+++++++++++||||+|...... -+|+.|+++++
T Consensus 149 ~~~~---~~~iv~~Hhpp~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~GH~H~~~~~~--------~~gi~~~~~~s 217 (256)
T d2hy1a1 149 TPAP---DGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNAT--------FVGIPVSVASA 217 (256)
T ss_dssp SCCT---TCEEEECSSCSSCCSSHHHHTTSBCCHHHHHHHHTTSSEEEEEECSSSSCEEEE--------ETTEEEEECCC
T ss_pred hhhc---cCceeeeecCCcccccccccccccccHHHHHHHHhccCceEEEccccchhhceE--------ECCEEEEEcCC
Confidence 7633 3489999999876543110 1111235788899999999999999999755433 14777776654
Q ss_pred CCCCCCcccccCCCCCCCceeeecccCEEEEEEecC
Q 012895 364 GGNREGLALEFKEPKSPLSMFQESSFGHARLKILDE 399 (454)
Q Consensus 364 gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~ 399 (454)
..... .+. ..+..........||..+++..+
T Consensus 218 ~~~~~----~~~-~~~~~~~~~~~~~g~~lv~v~~d 248 (256)
T d2hy1a1 218 TCYTQ----DLT-VAAGGTRGRDGAQGCNLVHVYPD 248 (256)
T ss_dssp CC------------------------CEEEEEECSS
T ss_pred ccccc----ccc-CCCCCcccccCCCCEEEEEEECC
Confidence 32211 111 11111222334568888888543
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Probab=99.89 E-value=7e-22 Score=186.18 Aligned_cols=192 Identities=15% Similarity=0.193 Sum_probs=129.4
Q ss_pred eEEEEEecCCCCCCh-------------HHHHHHhh--cCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeec
Q 012895 148 IEFAIVGDLGQTEWT-------------NSTLDHVG--SKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVT 212 (454)
Q Consensus 148 ~~f~~igD~~~~~~~-------------~~~l~~i~--~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v 212 (454)
++|++++|+|..... +++++.++ ..+||+||++||+++.+. ...|+.+.+.++++ .+|++++
T Consensus 1 M~i~hiSD~Hl~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~D~vv~~GDl~~~~~-~~~y~~~~~~l~~l--~~p~~~i 77 (271)
T d3d03a1 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGR-PEEYQVARQILGSL--NYPLYLI 77 (271)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCC-HHHHHHHHHHHTTC--SSCEEEE
T ss_pred CEEEEEecCcCCCCccccccCcCHHHHHHHHHHHHHhcCCCCCEEEECcccCcCCc-chhHHHHHHHHhcc--CCCEEEE
Confidence 689999999964321 23555564 468999999999998554 45666666666655 3899999
Q ss_pred CCCcccCCCCCCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCC----CCCHHHHHHHHHHHHhhcc
Q 012895 213 EGNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDF----DEDSAQYKWLKADLAKINR 288 (454)
Q Consensus 213 ~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~----~~~~~Q~~WL~~~L~~~~~ 288 (454)
+||||.. ..+..+...+. +.. ........|.++.++++||+||+.... ....+|++||+++|++...
T Consensus 78 ~GNHD~~-------~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~i~ldt~~~~~~~~~l~~~ql~wL~~~L~~~~~ 148 (271)
T d3d03a1 78 PGNHDDK-------ALFLEYLQPLC-PQL-GSDANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEAQLFEGGD 148 (271)
T ss_dssp CCTTSCH-------HHHHHHHGGGS-GGG-CSCGGGCCEEECSSSSEEEECCCCCTTCSSBCCCHHHHHHHHHHHHHHTT
T ss_pred ecCccch-------HHHHHHhhhhh-hcc-ccccCcceEEEecCCeEEEecccccCCCCcceecHHHHHHHHHHHhhhcc
Confidence 9999973 22222221111 100 011124567788889999999986432 2468999999999998632
Q ss_pred CCCCeEEEEEccccccCCCCCCCC-cHHHHHHHHHHHHhc-CCcEEEecccccceeeecccCCCcCCCCcEEEEEC
Q 012895 289 KKTPWIFVLLHAPWYNTNTAHQGE-GESMRNSMEELLYNA-RVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIG 362 (454)
Q Consensus 289 ~~~~w~Iv~~H~P~~~~~~~~~~~-~~~~~~~l~~ll~~~-~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G 362 (454)
+++||++|||++......... .....++|.+++.++ +|+++||||+|...... -+|+.++++.
T Consensus 149 ---~~~iv~~Hh~p~~~~~~~~d~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~~--------~~g~~~~~~p 213 (271)
T d3d03a1 149 ---KPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMTQ--------YRQALISTLP 213 (271)
T ss_dssp ---SCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEEE--------ETTEEEEECC
T ss_pred ---ceeEEEeccCccccCccccccccccchHHHHHHHHhcCCeEEEEeCCcchhhceE--------ECCEEEEEcC
Confidence 347889999988665432211 112356899999998 69999999999865544 1466666543
|
| >d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.87 E-value=6.1e-22 Score=159.79 Aligned_cols=95 Identities=38% Similarity=0.625 Sum_probs=85.3
Q ss_pred CCCCCCeeEEEEecC--CCcEEEEEEeCCCCCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEE
Q 012895 49 RSESDPQQVHISLAA--KDYIRVSWITDDKEAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 49 ~~~~~p~~v~l~~~~--~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 126 (454)
+..++|+||||++++ .++|+|+|+|.+.+..+.|+||++++.++..+.+...+|.+.+...+++|+|+|+||+|||+|
T Consensus 14 ~~~~~P~qvhlt~~~~~~tsm~VsW~T~~~~~~~~V~yg~~~~~~~~~a~~~~~~~~~~~~~~~~~h~v~Lt~L~P~T~Y 93 (112)
T d2qfra1 14 PGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGKMSTYRFFNYSSGFIHHTTIRKLKYNTKY 93 (112)
T ss_dssp CSTTCCEEEEEEECSSSSSCEEEEEEESSSCCCCEEEEEESSSCCCEEEECEEECCBCSSCBCCEEEEEEECSCCTTCEE
T ss_pred CCCCCCccEEEeCcCCCCCEEEEEEECCCCCCCcEEEEEECCCCCCcEEEEEEEEEEecccCCcEEEEEEECCCCCCCEE
Confidence 467899999999997 589999999987788899999999988888899888777766667889999999999999999
Q ss_pred EEEeCc--cCceeEEECCC
Q 012895 127 YYRCGG--RGPEFSFKMPP 143 (454)
Q Consensus 127 ~Yrv~~--~s~~~~F~T~p 143 (454)
+|||+. +|++++|+|+|
T Consensus 94 ~YrVG~~~~S~~~~F~T~P 112 (112)
T d2qfra1 94 YYEVGLRNTTRRFSFITPP 112 (112)
T ss_dssp EEEECCSSSCEEEEEECCC
T ss_pred EEEECCCCceeeEEEEcCC
Confidence 999997 48899999998
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Probab=99.86 E-value=2.1e-21 Score=184.59 Aligned_cols=230 Identities=16% Similarity=0.129 Sum_probs=140.9
Q ss_pred eEEEEEecCCCCCC--------------------hHHHHHHhhcCCCCeEeecCccccCCCC--hhhHHHHhhhhhhhhc
Q 012895 148 IEFAIVGDLGQTEW--------------------TNSTLDHVGSKDYDVFLLPGDLSYADFQ--QPLWDSFGRLVEPYAS 205 (454)
Q Consensus 148 ~~f~~igD~~~~~~--------------------~~~~l~~i~~~~pd~vl~~GDl~y~~~~--~~~~~~~~~~~~~l~~ 205 (454)
|||++++|+|.... ..++++.+++.+|||||++||+++.... ......+.+..+.+..
T Consensus 4 f~f~~isD~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~i~~~~~DfVv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~ 83 (320)
T d2nxfa1 4 FTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAELDA 83 (320)
T ss_dssp EEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHHHHT
T ss_pred EEEEEEecCCCCCCCCccccccccchhhHHHHHHHHHHHHHHhhCCCCEEEECCCCCCCCCcchhHHHHHHHHHHHHHHH
Confidence 99999999996421 1234566678899999999999974321 1111223333333332
Q ss_pred -CCCeeecCCCcccCCCCCCCcchhhhhh---hhc--cCCCCCCCCCCCceEEEEeCeEEEEEecccCC-----------
Q 012895 206 -SRPWMVTEGNHEIESIPIILPHAFKAYN---ARW--LMPYEESGSSSNLYYSFDIAGAHIIMLGSYTD----------- 268 (454)
Q Consensus 206 -~~P~~~v~GNHD~~~~~~~~~~~~~~~~---~~~--~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~----------- 268 (454)
.+|+++++||||....... ....... ..+ .......+......+....++++|+.+++...
T Consensus 84 ~~~p~~~v~GNHD~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (320)
T d2nxfa1 84 CSVDVHHVWGNHEFYNFSRP--SLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESEK 161 (320)
T ss_dssp TCSEEEECCCHHHHHHCCHH--HHHTSTTCCCC------CEECGGGTCCCEEEEEETTEEEEECCTTSBCSSSSCTTSHH
T ss_pred cCCCEEEecccCccccccch--hcccccccchhhhcccccccccCCCCccceeecCCCeEEEEecCcccccccccccccc
Confidence 4899999999998532210 0000000 000 00000001112445667888999999986311
Q ss_pred -----------------------------------CCCCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCc
Q 012895 269 -----------------------------------FDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEG 313 (454)
Q Consensus 269 -----------------------------------~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~ 313 (454)
...+.+|++||+++|++++++ ..++|+++|+|+..........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~-~~~viv~~H~p~~~~~~~~~~~- 239 (320)
T d2nxfa1 162 HTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHK-QERVLIFSHLPVHPCAADPICL- 239 (320)
T ss_dssp HHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHHH-TCEEEEEESSCCCTTSSCGGGS-
T ss_pred cccccceeeecccccceecccccccccccccccccccccHHHHHHHHHHHHhhhhc-CCceEEEECCCCccCCCCCccc-
Confidence 012588999999999987653 3468999999987654422111
Q ss_pred HHHHHHHHHHHHhc-CCcEEEecccccceeeecccCCCcCCCCcEEEEECCCCCCCCcccccCCCCCCCceeeecccCEE
Q 012895 314 ESMRNSMEELLYNA-RVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQESSFGHA 392 (454)
Q Consensus 314 ~~~~~~l~~ll~~~-~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~ 392 (454)
....++|.++|.++ +|+++|+||+|..++... .+|+.||++|+.. ... ....+|.
T Consensus 240 ~~~~~~~~~~l~~~~~V~~v~~GH~H~~~~~~~-------~~g~~~i~~~~~~-------~~~----------~~~~~~~ 295 (320)
T d2nxfa1 240 AWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTD-------SSGAQHITLEGVI-------ETP----------PHSHAFA 295 (320)
T ss_dssp CTTHHHHHHHHHTCTTEEEEEECSCTTCEEEEC-------TTSCEEEECCCGG-------GCC----------TTSCEEE
T ss_pred hhhHHHHHHHHHhCCCeeEEEeCCcCCcCeeec-------cCCCEEEECCeee-------cCC----------CCCCCEE
Confidence 12357789999998 599999999998776542 3588888775421 111 1124778
Q ss_pred EEEEecCCeEEEEE
Q 012895 393 RLKILDETRAHWSW 406 (454)
Q Consensus 393 ~l~v~~~~~~~~~~ 406 (454)
.++|..+ .+.++-
T Consensus 296 ~~~v~~d-~~~~~~ 308 (320)
T d2nxfa1 296 TAYLYED-RMVMKG 308 (320)
T ss_dssp EEEECSS-EEEEEE
T ss_pred EEEEECC-EEEEEE
Confidence 8888654 566653
|
| >d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Probab=99.84 E-value=1.1e-20 Score=153.97 Aligned_cols=95 Identities=35% Similarity=0.519 Sum_probs=83.1
Q ss_pred CCCCCCeeEEEEecC--CCcEEEEEEeCC-CCCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCE
Q 012895 49 RSESDPQQVHISLAA--KDYIRVSWITDD-KEAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATT 125 (454)
Q Consensus 49 ~~~~~p~~v~l~~~~--~~~~~v~W~t~~-~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 125 (454)
....+|+||||++++ .++|+|+|+|.. .++.+.|+||++++.++..+.+....|...+...+|+|+|+|+||+|||+
T Consensus 20 ~~~~~P~qvhl~~~~~~~tsm~VsW~T~~~~~~~~~V~yG~~~~~~~~~a~g~s~~~~~~~~~~~~~H~v~LtgL~P~T~ 99 (119)
T d1xzwa1 20 SGYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKSQKRAMGTVVTYKYYNYTSAFIHHCTIKDLEYDTK 99 (119)
T ss_dssp CSTTCCEEEEEEECSSSSSCEEEEEEESSCCTTTTEEEEEETTCCCCEEEECEEECCEETTEECCEEEEEEECCCCTTCE
T ss_pred CCCCCCCEEEEEecCCCCCEEEEEEECCCCCCCCCEEEEcCCCCCCccEEEEEEEEeecccccCCeEEEEEECCCCCCCE
Confidence 456789999999997 689999999954 34667999999999899999888777776666788999999999999999
Q ss_pred EEEEeCc--cCceeEEECCC
Q 012895 126 YYYRCGG--RGPEFSFKMPP 143 (454)
Q Consensus 126 Y~Yrv~~--~s~~~~F~T~p 143 (454)
|+|||++ ++++++|+|+|
T Consensus 100 Y~YrVG~~~~S~~~~F~T~P 119 (119)
T d1xzwa1 100 YYYRLGFGDAKRQFWFVTPP 119 (119)
T ss_dssp EEEEECCGGGCEEEEEECCC
T ss_pred EEEEECCCCccceEEEeCCC
Confidence 9999997 47899999998
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Probab=99.71 E-value=2.2e-17 Score=149.70 Aligned_cols=178 Identities=11% Similarity=0.025 Sum_probs=113.3
Q ss_pred CeEEEEEecCCCCCCh-HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCCCC
Q 012895 147 PIEFAIVGDLGQTEWT-NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPIIL 225 (454)
Q Consensus 147 ~~~f~~igD~~~~~~~-~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~ 225 (454)
+-+++++||+|..... +++++.+.+.++|+||++||+++......++..+.+.+..+ .+|+++++||||......
T Consensus 5 ~~~i~~~sd~hg~~eale~~~~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~~~L~~~--~~pv~~i~GNHD~~~~~~-- 80 (228)
T d1uf3a_ 5 VRYILATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEA--HLPTAYVPGPQDAPIWEY-- 80 (228)
T ss_dssp CCEEEEEECCTTCHHHHHHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHHHHHHGGG--CSCEEEECCTTSCSHHHH--
T ss_pred ccEEEEEeCCCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCccchHHHHhhhhhccc--cceEEEEecCCCchhhhh--
Confidence 4578899999976432 45666667789999999999998666555555555544443 489999999999732110
Q ss_pred cchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCC----------CCCCHHHHHHHHHHHHhhccCCCCeEE
Q 012895 226 PHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTD----------FDEDSAQYKWLKADLAKINRKKTPWIF 295 (454)
Q Consensus 226 ~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~----------~~~~~~Q~~WL~~~L~~~~~~~~~w~I 295 (454)
....+......+.. ......+.+..+++.++.++.... ......|..|+.+.++... ..+.|
T Consensus 81 --~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~i 152 (228)
T d1uf3a_ 81 --LREAANVELVHPEM---RNVHETFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWELK---DYPKI 152 (228)
T ss_dssp --HHHHHHHHHHCTTE---EECBTSEEEETTTEEEEEECSEEESSSCCBSSSSCEEEHHHHHHHHGGGGGSC---SCCEE
T ss_pred --hhhhcccccccccc---cccceeeeeccCCEEEEecCCccccCcCcchhhhhhhhHHHHHHHHHHHhhcc---CCceE
Confidence 00111111100100 001223456667788888765321 1124678888888887653 23479
Q ss_pred EEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccce
Q 012895 296 VLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYE 341 (454)
Q Consensus 296 v~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~ 341 (454)
+++|+|++.....+. ..+.+.++++++++++++|||+|..+
T Consensus 153 l~~H~p~~~~~~~~~-----~~~~~~~~~~~~~~~lvl~GH~H~~~ 193 (228)
T d1uf3a_ 153 FLFHTMPYHKGLNEQ-----GSHEVAHLIKTHNPLLVLVAGKGQKH 193 (228)
T ss_dssp EEESSCBCBTTTBTT-----SBHHHHHHHHHHCCSEEEECCSSCEE
T ss_pred EEEeeeccCcccccc-----ccHHHHHHHHhcCCcEEEEcccccch
Confidence 999999876543322 12467778899999999999999743
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Probab=99.70 E-value=4.3e-17 Score=150.31 Aligned_cols=185 Identities=10% Similarity=0.087 Sum_probs=108.3
Q ss_pred CeEEEEEecCCCCCCh-HHHHHHhhcCCCCeEeecCccccCCCChhhHH-----------------------HHhhhhhh
Q 012895 147 PIEFAIVGDLGQTEWT-NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWD-----------------------SFGRLVEP 202 (454)
Q Consensus 147 ~~~f~~igD~~~~~~~-~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~-----------------------~~~~~~~~ 202 (454)
|.||+++||+|..... .++++.+.+.+||+||++||+++.......|. .+...++.
T Consensus 2 ~~ri~~isD~h~~~~~l~~l~~~~~~~~~D~vli~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~d~~~~~~~~~~ 81 (257)
T d2yvta1 2 PRKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDKFFRE 81 (257)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHHHCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHhhcCCCEEEEecccCCCCCCCHHHHHHHHhhhhhceeeeccccccchhhHHHHHHH
Confidence 6799999999976543 45666777889999999999997543322222 12233444
Q ss_pred hhc-CCCeeecCCCcccCCCCCCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCC-------CC--C
Q 012895 203 YAS-SRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDF-------DE--D 272 (454)
Q Consensus 203 l~~-~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~-------~~--~ 272 (454)
+.. .+|+++++||||...... ....+......+. .......+.+..+++.|+++++.... .. .
T Consensus 82 L~~~~~pv~~i~GNHD~~~~~~----~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (257)
T d2yvta1 82 IGELGVKTFVVPGKNDAPLKIF----LRAAYEAETAYPN---IRVLHEGFAGWRGEFEVIGFGGLLTEHEFEEDFVLKYP 154 (257)
T ss_dssp HHTTCSEEEEECCTTSCCHHHH----HHHHHHTTTTCTT---EEECSSEEEEETTTEEEEEECSEEESSCCBSSSSCEEE
T ss_pred HHhcCCcEEEEeCCCcchhhHH----HHHhccccccccc---cccccceeEEecCCeEEEEeccccCCccccchhhhhhh
Confidence 443 389999999999731100 1111111111111 00012233444566888877653211 01 1
Q ss_pred HHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCC--cHHHHHHHHHHHHhcCCcEEEecccccce
Q 012895 273 SAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGE--GESMRNSMEELLYNARVDVVFAGHVHAYE 341 (454)
Q Consensus 273 ~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~--~~~~~~~l~~ll~~~~v~lvl~GH~H~y~ 341 (454)
..+..|++..++.. +...+|+++|+|++.+....... .....+.+.+++++++++++++||+|...
T Consensus 155 ~~~~~~~~~~~~~~---~~~~~Il~~H~pp~~~~~~~~~~~~~~~g~~~l~~~l~~~~~~~~~~GHiH~~~ 222 (257)
T d2yvta1 155 RWYVEYILKFVNEL---KPRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVGKGH 222 (257)
T ss_dssp HHHHHHHGGGGGGS---CCCEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSCCEE
T ss_pred hhHHHHHHHHhhhc---ccccEEEEEccccccccccccccchhhhhhHHHHHhhhhcCCcEEEEEeecCCe
Confidence 23334444444433 33458999999997654322111 11234678899999999999999999743
|
| >d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.38 E-value=2.2e-11 Score=106.10 Aligned_cols=178 Identities=15% Similarity=0.143 Sum_probs=108.7
Q ss_pred eEEEEEecCCCCCCh----HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCC
Q 012895 148 IEFAIVGDLGQTEWT----NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPI 223 (454)
Q Consensus 148 ~~f~~igD~~~~~~~----~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~ 223 (454)
+|++++||+|..... ..+.+.++..++|.|+++||++. . ...+.++.+. .|++++.||||...
T Consensus 1 MkI~viSD~H~~~~~~~l~~~~~~~~~~~~~D~Ii~~GDi~~----~----e~l~~l~~~~--~~v~~V~GN~D~~~--- 67 (182)
T d1z2wa1 1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCT----K----ESYDYLKTLA--GDVHIVRGDFDENL--- 67 (182)
T ss_dssp CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCSEEEECSCCBS----H----HHHHHHHHHC--SEEEECCCTTCCCT---
T ss_pred CEEEEEeecCCCCcchhhHHHHHHHhcccCCCEEEEccCccc----h----hhHHHHHhhC--CceEEEeCCcCccc---
Confidence 689999999965322 23333345668999999999983 1 1223333332 57899999999731
Q ss_pred CCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEEEEEccccc
Q 012895 224 ILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWY 303 (454)
Q Consensus 224 ~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~ 303 (454)
..|. .-.++++ .++|.++|.+.+
T Consensus 68 -------------~~p~---------~~~~~~~-----------------------------------g~~i~~~Hg~~~ 90 (182)
T d1z2wa1 68 -------------NYPE---------QKVVTVG-----------------------------------QFKIGLIHGHQV 90 (182)
T ss_dssp -------------TSCS---------EEEEEET-----------------------------------TEEEEEECSCCC
T ss_pred -------------ccce---------EEEEEEc-----------------------------------CcEEEEEeCCCC
Confidence 1221 1111111 135777786654
Q ss_pred cCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCCcCCCCcEEEEECCCCCCCCcccccCCCCCCCce
Q 012895 304 NTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSPLSM 383 (454)
Q Consensus 304 ~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~ 383 (454)
.... ..+.+..++...++|++++||+|...... -+++++|..|+-|.+.+. .-.++
T Consensus 91 ~~~~--------~~~~l~~~~~~~~~divi~GHTH~p~~~~--------~~~~~~iNPGSv~~pr~~--~~~~~------ 146 (182)
T d1z2wa1 91 IPWG--------DMASLALLQRQFDVDILISGHTHKFEAFE--------HENKFYINPGSATGAYNA--LETNI------ 146 (182)
T ss_dssp CBTT--------CHHHHHHHHHHHSSSEEECCSSCCCEEEE--------ETTEEEEECCCTTCCCCS--SCSCC------
T ss_pred CCCC--------CHHHHHHHHhccCCCEEEECCcCcceEEE--------ECCEEEEeCCCCCCCCCC--CCCCC------
Confidence 3221 12456677788899999999999854332 247888888876654210 00111
Q ss_pred eeecccCEEEEEEecCCeEEEEEEEecCCCceeeeEEEEEEc
Q 012895 384 FQESSFGHARLKILDETRAHWSWYRNNDSDAVIADEVRLESL 425 (454)
Q Consensus 384 ~~~~~~G~~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i~~~ 425 (454)
...|..|++. +..+.+..++... +.+..+++.++|.
T Consensus 147 ----~~syaild~~-~~~v~~~~~~l~~-~~v~~~~~~~~~~ 182 (182)
T d1z2wa1 147 ----IPSFVLMDIQ-ASTVVTYVYQLIG-DDVKVERIEYKKS 182 (182)
T ss_dssp ----CCEEEEEEEE-TTEEEEEEEEEET-TEEEEEEEEEECC
T ss_pred ----CCEEEEEEEe-CCEEEEEEEEecC-CcEEEEEEEEEcC
Confidence 2247788874 4677777776544 4467888888763
|
| >d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Cryptosporidium parvum [TaxId: 5807]
Probab=99.35 E-value=5.9e-11 Score=104.49 Aligned_cols=183 Identities=13% Similarity=0.189 Sum_probs=107.5
Q ss_pred EEEEecCCCCCCh----HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCCCC
Q 012895 150 FAIVGDLGQTEWT----NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPIIL 225 (454)
Q Consensus 150 f~~igD~~~~~~~----~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~ 225 (454)
++++||+|..... ..+.+.+...++|.||++||++.. ...+.++.+. .++++|.||||......
T Consensus 6 IlviSD~H~~~~~~~l~~~~~~~~~~~~vD~ii~~GDi~~~--------~~l~~l~~l~--~~v~~V~GN~D~~~~~~-- 73 (193)
T d2a22a1 6 VLLIGDLKIPYGAKELPSNFRELLATDKINYVLCTGNVCSQ--------EYVEMLKNIT--KNVYIVSGDLDSAIFNP-- 73 (193)
T ss_dssp EEEECCCCTTTTCSSCCGGGHHHHHCTTCCEEEECSCCCCH--------HHHHHHHHHC--SCEEECCCTTCCSCCBC--
T ss_pred EEEEeCCCCCcccchhhHHHHHHhccCCCCEEEECCCCCCH--------HHHHHHHhhC--CCEEEEcCCCCcchhhh--
Confidence 7899999964322 234445567899999999999741 1223334332 46889999999743211
Q ss_pred cchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEEEEEccccccC
Q 012895 226 PHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNT 305 (454)
Q Consensus 226 ~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~ 305 (454)
-..+.. ..| ....+.+++ ++|.+.|...+..
T Consensus 74 ---~~~~~~--~lp---------~~~~~~~~~-----------------------------------~~i~l~H~~~~~~ 104 (193)
T d2a22a1 74 ---DPESNG--VFP---------EYVVVQIGE-----------------------------------FKIGLMHGNQVLP 104 (193)
T ss_dssp ---CGGGTB--CCC---------SEEEEEETT-----------------------------------EEEEEECSTTSSS
T ss_pred ---hHHHHh--hCC---------ccEEEEECC-----------------------------------EEEEEEeccCCCC
Confidence 011111 112 122232222 3566667543322
Q ss_pred CCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCCcCCCCcEEEEECCCCCCCCcccccCCCCCCCceee
Q 012895 306 NTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQ 385 (454)
Q Consensus 306 ~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~ 385 (454)
.. ..+.+..++.+.++|++++||+|...... -+++++|..|+-|.+.. ....+
T Consensus 105 ~~--------~~~~l~~~~~~~~~dvvi~GHTH~~~~~~--------~~g~~~iNPGSvg~pr~--~~~~~--------- 157 (193)
T d2a22a1 105 WD--------DPGSLEQWQRRLDCDILVTGHTHKLRVFE--------KNGKLFLNPGTATGAFS--ALTPD--------- 157 (193)
T ss_dssp TT--------CHHHHHHHHHHHTCSEEEECSSCCCEEEE--------ETTEEEEECCCSSCCCC--TTSTT---------
T ss_pred CC--------CHHHHHHHHhhcCCCEEEEcCccCceEEE--------ECCEEEEECCCCCcCcC--CCCCC---------
Confidence 11 12567777888899999999999854432 24778888888765421 00111
Q ss_pred ecccCEEEEEEecCCeEEEEEEEecCCCceeeeEEEEE
Q 012895 386 ESSFGHARLKILDETRAHWSWYRNNDSDAVIADEVRLE 423 (454)
Q Consensus 386 ~~~~G~~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i~ 423 (454)
....|..|++. +..+.+++++..+++ +-++...+.
T Consensus 158 -~~~syaild~~-~~~v~v~~y~l~~~~-~~~~~~~~~ 192 (193)
T d2a22a1 158 -APPSFMLMALQ-GNKVVLYVYDLRDGK-TNVAMSEFS 192 (193)
T ss_dssp -CCCEEEEEEEE-TTEEEEEEEEEETTE-EEEEEEEEE
T ss_pred -CCCEEEEEEEE-CCEEEEEEEEecCCe-EEEEEEEEe
Confidence 12367889974 568888888877665 334444443
|
| >d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DNA double-strand break repair nuclease domain: Mre11 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=99.28 E-value=4e-12 Score=121.04 Aligned_cols=73 Identities=22% Similarity=0.250 Sum_probs=51.9
Q ss_pred eEEEEEecCCCCCCh--------------HHHHHHhhcCCCCeEeecCccccCCCC-hhhHHHHhhhhhhhhc-CCCeee
Q 012895 148 IEFAIVGDLGQTEWT--------------NSTLDHVGSKDYDVFLLPGDLSYADFQ-QPLWDSFGRLVEPYAS-SRPWMV 211 (454)
Q Consensus 148 ~~f~~igD~~~~~~~--------------~~~l~~i~~~~pd~vl~~GDl~y~~~~-~~~~~~~~~~~~~l~~-~~P~~~ 211 (454)
+||+++||+|.+... .++++.+.+.++|+||++||+++.... ......+.+.++.+.. .+|+++
T Consensus 1 Mkilh~SDlHlG~~~~~~~~~~~~~~~~l~~iv~~a~~~~~D~vli~GDlfd~~~~~~~~~~~~~~~~~~l~~~~i~v~~ 80 (333)
T d1ii7a_ 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPVFA 80 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTTCCEEE
T ss_pred CEEEEEecCcCCCCCcCchhHHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHhhHHhcCCcEEE
Confidence 699999999976432 123444457899999999999975433 2333445556666654 389999
Q ss_pred cCCCcccCC
Q 012895 212 TEGNHEIES 220 (454)
Q Consensus 212 v~GNHD~~~ 220 (454)
++||||...
T Consensus 81 i~GNHD~~~ 89 (333)
T d1ii7a_ 81 IEGNHDRTQ 89 (333)
T ss_dssp ECCTTTCCS
T ss_pred eCCCCcccc
Confidence 999999853
|
| >d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Putative phosphodiesterase MJ0936 species: Methanococcus jannaschii [TaxId: 2190]
Probab=99.20 E-value=5.4e-11 Score=102.03 Aligned_cols=62 Identities=15% Similarity=0.179 Sum_probs=45.1
Q ss_pred eEEEEEecCCCCCC-hHHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccC
Q 012895 148 IEFAIVGDLGQTEW-TNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIE 219 (454)
Q Consensus 148 ~~f~~igD~~~~~~-~~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~ 219 (454)
+|++++||+|.... .+++++.+++.++|.|+++||++.. ..+ +.+.. ...|++.+.||||..
T Consensus 1 MkI~iiSDiHgn~~al~~vl~~~~~~~~D~ii~~GD~~~~----~~~----~~l~~--~~~~~~~v~GN~D~~ 63 (165)
T d1s3la_ 1 MKIGIMSDTHDHLPNIRKAIEIFNDENVETVIHCGDFVSL----FVI----KEFEN--LNANIIATYGNNDGE 63 (165)
T ss_dssp CEEEEECCCTTCHHHHHHHHHHHHHSCCSEEEECSCCCST----HHH----HHGGG--CSSEEEEECCTTCCC
T ss_pred CEEEEEEeCCCCHHHHHHHHHHHHhcCCCEEEECCCccCH----HHH----HHHhh--cCccEEEEccccccc
Confidence 69999999996532 3567777788899999999999842 111 11121 237899999999974
|
| >d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Phosphoesterase-related domain: Hypothetical protein PF1291 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=99.18 E-value=7.7e-11 Score=107.42 Aligned_cols=190 Identities=7% Similarity=-0.044 Sum_probs=95.1
Q ss_pred eEEEEEecCCCCCC-hHHHHHHhh-----cCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCC
Q 012895 148 IEFAIVGDLGQTEW-TNSTLDHVG-----SKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESI 221 (454)
Q Consensus 148 ~~f~~igD~~~~~~-~~~~l~~i~-----~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~ 221 (454)
++++++||+|.... .+++++.+. ..++|.||++||+++.+... ....+.+..+....++++++||||...
T Consensus 1 v~I~visDiHg~~~~l~~~l~~i~~~~~~~~~~D~ii~~GDlvd~G~~~---~evi~~l~~l~~~~~v~~v~GNHD~~~- 76 (251)
T d1nnwa_ 1 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGLFPYP---KEVIEVIKDLTKKENVKIIRGKYDQII- 76 (251)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSSCH---HHHHHHHHHHHHHSCEEEECCHHHHHH-
T ss_pred CEEEEEEccccCHHHHHHHHHHHHHhhccCCCCcEEEEecCcCCCCCCc---HHHHHHHHHHhhcCCEEEEeccHHHHH-
Confidence 58999999995432 244555553 34679999999999865432 233455555555568999999999631
Q ss_pred CCCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEEEEEccc
Q 012895 222 PIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLHAP 301 (454)
Q Consensus 222 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P 301 (454)
..+......+... ..... .+... ..++ +.......+++.||+............-.+++.|++
T Consensus 77 --------~~~~~~~~~~~~~----~~~~~---~~~~~-~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~H~~ 139 (251)
T d1nnwa_ 77 --------AMSDPHATDPGYI----DKLEL---PGHVK-KALK-FTWEKLGHEGREYLRDLPIYLVDKIGGNEVFGVYGS 139 (251)
T ss_dssp --------HHSCTTCSSSGGG----GGSSC---CHHHH-HHHH-HHHHHHHHHHHHHHHTSCSCEEEEETTEEEEEESSC
T ss_pred --------Hhccccccccchh----hhhcc---chhHH-HhhH-HHhhhcCHHHHHHHHhcccceEEeeCCCcEEEEecC
Confidence 0000000000000 00000 00000 0000 000001234455554332221111111268888988
Q ss_pred cccCCCCCCCCcHHHHHHHHHHHHhc-CCcEEEecccccceeeecccCCCcCCCCcEEEEECCCCCC
Q 012895 302 WYNTNTAHQGEGESMRNSMEELLYNA-RVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGGNR 367 (454)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~l~~ll~~~-~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~ 367 (454)
+........... .....+...+... +++++++||+|.-.... .++..++..|+-|.+
T Consensus 140 p~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~vv~GHtH~~~~~~--------~~~~~~in~Gsvg~~ 197 (251)
T d1nnwa_ 140 PINPFDGEVLAE-QPTSYYEAIMRPVKDYEMLIVASPMYPVDAM--------TRYGRVVCPGSVGFP 197 (251)
T ss_dssp SSCTTTCCCCSS-CCHHHHHHHHGGGTTSSEEEESTTCSEEEEE--------ETTEEEEEECCSSSC
T ss_pred ccCcccchhhhh-hHHHHHhhhcccccCceEEEEeccceEEEEE--------eeeeecccccccccc
Confidence 765443222111 1223333344433 58999999999843332 146778888887754
|
| >d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Uncharacterized protein SP1879 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.14 E-value=2.3e-09 Score=92.27 Aligned_cols=159 Identities=13% Similarity=0.147 Sum_probs=99.4
Q ss_pred CeEEEEEecCCCCCCh-HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCCCC
Q 012895 147 PIEFAIVGDLGQTEWT-NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPIIL 225 (454)
Q Consensus 147 ~~~f~~igD~~~~~~~-~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~ 225 (454)
..|++++||+|..... +++++.+ ..++|.|+++||+.+..... + ..++.++.||||...
T Consensus 3 ~~kI~viSD~Hgn~~al~~vl~~~-~~~~D~iih~GD~~~~~~~~------------~--~~~~~~V~GN~D~~~----- 62 (173)
T d3ck2a1 3 KQTIIVMSDSHGDSLIVEEVRDRY-VGKVDAVFHNGDSELRPDSP------------L--WEGIRVVKGNMDFYA----- 62 (173)
T ss_dssp CEEEEEECCCTTCHHHHHHHHHHH-TTTSSEEEECSCCCSCTTCG------------G--GTTEEECCCTTCCST-----
T ss_pred CCEEEEEeccCCCHHHHHHHHHHh-hcCCCEEEECCcccCcccch------------h--hcCCeEEecCccccc-----
Confidence 5799999999964321 2344433 45799999999998643321 1 147889999999731
Q ss_pred cchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEEEEEccccccC
Q 012895 226 PHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNT 305 (454)
Q Consensus 226 ~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~ 305 (454)
..|. ...+++++ ..|.++|..++..
T Consensus 63 -----------~~~~---------~~~~~~~~-----------------------------------~~~~~~Hg~~~~~ 87 (173)
T d3ck2a1 63 -----------GYPE---------RLVTELGS-----------------------------------TKIIQTHGHLFDI 87 (173)
T ss_dssp -----------TCCS---------EEEEEETT-----------------------------------EEEEEECSGGGTT
T ss_pred -----------ccce---------EEEEEECC-----------------------------------EEEEEEeCcCCCC
Confidence 1121 11122221 3567777655543
Q ss_pred CCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCCcCCCCcEEEEECCCCCCCCcccccCCCCCCCceee
Q 012895 306 NTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQ 385 (454)
Q Consensus 306 ~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~ 385 (454)
... .+.+..++.+.++|++++||+|...... .+++++|..|+-|.+.+ ..+
T Consensus 88 ~~~--------~~~l~~~~~~~~~dvvi~GHTH~p~~~~--------~~~~~~iNPGSvg~pr~-----~~~-------- 138 (173)
T d3ck2a1 88 NFN--------FQKLDYWAQEEEAAICLYGHLHVPSAWL--------EGKILFLNPGSISQPRG-----TIR-------- 138 (173)
T ss_dssp TTC--------SHHHHHHHHHTTCSEEECCSSCCEEEEE--------ETTEEEEEECCSSSCCT-----TCC--------
T ss_pred CCC--------HHHHHHHHHhcCCCEEEeCCcCcceEEE--------ECCEEEEECCCCCCCCC-----CCC--------
Confidence 221 1356677788899999999999854433 14788999998875421 111
Q ss_pred ecccCEEEEEEecCCeEEEEEEEecCCC
Q 012895 386 ESSFGHARLKILDETRAHWSWYRNNDSD 413 (454)
Q Consensus 386 ~~~~G~~~l~v~~~~~~~~~~~~~~dg~ 413 (454)
...|+.|++. ...+.++|+.. |++
T Consensus 139 --~~syail~~~-~~~~~v~~~~~-d~~ 162 (173)
T d3ck2a1 139 --ECLYARVEID-DSYFKVDFLTR-DHE 162 (173)
T ss_dssp --SCCEEEEEEC-SSEEEEEEECT-TSC
T ss_pred --CCEEEEEEEe-CCEEEEEEEEe-CCe
Confidence 1256788874 46788888864 554
|
| >d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Phosphodiesterase yfcE species: Escherichia coli [TaxId: 562]
Probab=98.74 E-value=4.9e-08 Score=84.38 Aligned_cols=71 Identities=13% Similarity=0.169 Sum_probs=46.0
Q ss_pred eEEEEEecCCCCCC-hHHHHHHhhcCCCCeEeecCccccCCCChh-hHH-HHhhhhhhhhc-CCCeeecCCCccc
Q 012895 148 IEFAIVGDLGQTEW-TNSTLDHVGSKDYDVFLLPGDLSYADFQQP-LWD-SFGRLVEPYAS-SRPWMVTEGNHEI 218 (454)
Q Consensus 148 ~~f~~igD~~~~~~-~~~~l~~i~~~~pd~vl~~GDl~y~~~~~~-~~~-~~~~~~~~l~~-~~P~~~v~GNHD~ 218 (454)
+|++++||+|.... .+++++.+.+.++|.||++||++..+.... ... .....++.+.. ..|++.+.||||.
T Consensus 2 Mki~iiSDiHg~~~al~~vl~~~~~~~~D~iv~~GDiv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNhD~ 76 (184)
T d1su1a_ 2 MKLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEVAHKVIAVRGNCDS 76 (184)
T ss_dssp CEEEEECCCTTBHHHHHHHHHHHHHHTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTTGGGEEECCCTTCC
T ss_pred cEEEEEeecCCCHHHHHHHHHHHhhcCCCEEEEcCcccccCccchhhhccCcHHHHHHHHhcCCcEEEecCCCCc
Confidence 69999999995432 245666677789999999999986443211 000 00112222222 2689999999997
|
| >d1xm7a_ d.159.1.8 (A:) Hypothetical protein aq_1666 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Hypothetical protein aq 1666 domain: Hypothetical protein aq 1666 species: Aquifex aeolicus [TaxId: 63363]
Probab=98.73 E-value=7.1e-08 Score=83.82 Aligned_cols=133 Identities=17% Similarity=0.208 Sum_probs=78.6
Q ss_pred EEEEecCCCCCCh--------------HHHHHHhhc--CCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecC
Q 012895 150 FAIVGDLGQTEWT--------------NSTLDHVGS--KDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTE 213 (454)
Q Consensus 150 f~~igD~~~~~~~--------------~~~l~~i~~--~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~ 213 (454)
+.++||+|.+... ..+++..++ .+.|.|+++||+++...... .+.+++++|.. ..+.+.
T Consensus 4 i~fiSD~Hfgh~~i~~~r~f~~~~~~~~~ii~~wn~~V~~~D~v~~LGD~~~~~~~~~---~~~~~l~~L~g--~~~lI~ 78 (188)
T d1xm7a_ 4 MYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHFNDKN---EYLRIWKALPG--RKILVM 78 (188)
T ss_dssp EEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCSCCTT---SHHHHHHHSSS--EEEEEC
T ss_pred EEEEeCcCCCCcchhhcCCCCCHHHHHHHHHHHHHhhcCCCCEEEEeCCccccCCCHH---HHHHHHHHCCC--ceEEEe
Confidence 3469999975322 234444443 46799999999997543322 23445565543 468899
Q ss_pred CCcccCCCCCCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhccCCCCe
Q 012895 214 GNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPW 293 (454)
Q Consensus 214 GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w 293 (454)
||||.. .......+... ..++ ..+-.+ . -
T Consensus 79 GNHD~~---------~~~~~~~~~~~--------~~~~-------~~~~~~-------------------------g--~ 107 (188)
T d1xm7a_ 79 GNHDKD---------KESLKEYFDEI--------YDFY-------KIIEHK-------------------------G--K 107 (188)
T ss_dssp CTTCCC---------HHHHTTTCSEE--------ESSE-------EEEEET-------------------------T--E
T ss_pred cCCCch---------hhhhhhchhhH--------HHHH-------HHhhhC-------------------------C--e
Confidence 999973 11111111000 0011 111110 1 1
Q ss_pred EEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccce
Q 012895 294 IFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYE 341 (454)
Q Consensus 294 ~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~ 341 (454)
.|+++|.|+....... .......+..+..+.+++++|+||+|...
T Consensus 108 ~i~l~H~P~~~~~~~~---~~~~~~~~~~~~~~~~~~~~lhGH~H~~~ 152 (188)
T d1xm7a_ 108 RILLSHYPAKDPITER---YPDRQEMVREIYFKENCDLLIHGHVHWNR 152 (188)
T ss_dssp EEEEESSCSSCSSCCS---CHHHHHHHHHHHHHTTCSEEEECCCCCCS
T ss_pred EEEEEeCCCccccccc---cccchhHHHHHHHhcCceEEEEeeccCCc
Confidence 6999999986543321 22345677888899999999999999743
|
| >d1usha2 d.159.1.2 (A:26-362) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.51 E-value=2.8e-07 Score=87.58 Aligned_cols=183 Identities=15% Similarity=0.164 Sum_probs=92.9
Q ss_pred CeEEEEEecCCCCCCh-----------HHHHHHh----hcCCCCe-EeecCccccCCCChh--hHHHHhhhhhhhhcCCC
Q 012895 147 PIEFAIVGDLGQTEWT-----------NSTLDHV----GSKDYDV-FLLPGDLSYADFQQP--LWDSFGRLVEPYASSRP 208 (454)
Q Consensus 147 ~~~f~~igD~~~~~~~-----------~~~l~~i----~~~~pd~-vl~~GDl~y~~~~~~--~~~~~~~~~~~l~~~~P 208 (454)
.++|++++|+|..-.. ...++.+ ++.+++. +|.+||++....... ......+.+..+. .
T Consensus 8 ~ltILhtnD~Hg~l~~~~~~~~g~a~~~~~i~~~r~~~~~~~~~~l~ldaGD~~~gs~~s~~~~g~~~~~~mn~~g---~ 84 (337)
T d1usha2 8 KITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLVG---Y 84 (337)
T ss_dssp EEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCSSSCHHHHTTTTHHHHHHHHHHT---C
T ss_pred EEEEEEEeecccCCcCCCCCCcCHHHHHHHHHHHHHHHHhcCCCEEEEECCCCcccCHHHHHhCChHHHHHHHhcC---C
Confidence 4789999999853211 1234443 3456664 555999985432111 1122223333332 2
Q ss_pred eeecCCCcccCCCCCCCcchhhhhhhhccCCCCC-------CC-CCCCceEEEEeCeEE--EEEecccCC-------C--
Q 012895 209 WMVTEGNHEIESIPIILPHAFKAYNARWLMPYEE-------SG-SSSNLYYSFDIAGAH--IIMLGSYTD-------F-- 269 (454)
Q Consensus 209 ~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~-------~~-~~~~~~ys~~~g~v~--fi~Lds~~~-------~-- 269 (454)
=..++||||+.... ..+..+......|.-. .+ ..-..|.-++.++++ ||++-+... .
T Consensus 85 Da~~~GNHEfd~G~----~~l~~~~~~~~~p~l~aN~~~~~~~~~~~~py~I~~~~g~kVgviG~~~~~~~~~~~~~~~~ 160 (337)
T d1usha2 85 DAMAIGNHEFDNPL----TVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGNPEYFT 160 (337)
T ss_dssp CEEECCGGGGSSCH----HHHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEECTTTTTSSSCCCCT
T ss_pred eEEEechhhhccch----HHHHHHHHhcCceEeeccccccccccccccceeeeecCCeEEEeecccccccccccCccccc
Confidence 24678999996432 2333333333433211 01 112345567888855 466633110 0
Q ss_pred ----CCCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccc
Q 012895 270 ----DEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAY 340 (454)
Q Consensus 270 ----~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y 340 (454)
....+..+...++|++.+ +.+.+|+++|.+........... .....+...+...+||+++.||.|..
T Consensus 161 ~~~~~d~~~~~~~~~~~l~~~~--~~D~iI~lsH~G~~~d~~~~~~~--~~~~~la~~~~~~~vD~IvgGHsH~~ 231 (337)
T d1usha2 161 DIEFRKPADEAKLVIQELQQTE--KPDIIIAATHMGHYDNGEHGSNA--PGDVEMARALPAGSLAMIVGGHSQDP 231 (337)
T ss_dssp TEEECCHHHHHHHHHHHHHHHT--CCSEEEEEEESCCCGGGCCTTSC--CCHHHHHHHSCTTSSSEEECCSSCCB
T ss_pred CcccccHHHHHHHHHHHHhhcc--CCCEEEEecccCccccccccccc--chhHHHHHhCcccCceEEecCccCcc
Confidence 011233333334454332 56789999999865433211111 11233444444458999999999974
|
| >d3c9fa2 d.159.1.2 (A:16-337) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Candida albicans [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Candida albicans [TaxId: 5476]
Probab=98.27 E-value=3.7e-06 Score=79.06 Aligned_cols=183 Identities=20% Similarity=0.236 Sum_probs=86.9
Q ss_pred CCCeEEEEEecCCCCCC--------------hHHHHHHh----hcCCCCe-EeecCccccCCCChhhHHHHhhhhhhhhc
Q 012895 145 NFPIEFAIVGDLGQTEW--------------TNSTLDHV----GSKDYDV-FLLPGDLSYADFQQPLWDSFGRLVEPYAS 205 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~--------------~~~~l~~i----~~~~pd~-vl~~GDl~y~~~~~~~~~~~~~~~~~l~~ 205 (454)
-+.++|++.+|+|..-. .......+ ++.+++. +|.+||++...........-...+-++..
T Consensus 9 ~~~l~iLhtnD~Hg~l~~~~~~~~~~~~~gg~a~~~~~~~~~~~~~~~~~llldaGD~~~Gt~~~~~~~~~G~~~~~~mn 88 (322)
T d3c9fa2 9 WNDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPIFI 88 (322)
T ss_dssp CCSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHHHT
T ss_pred cCEEEEEEEeccccCCCCccccccccCccccHHHHHHHHHHHHHhcCCCEEEEECCccCCCCchhhhcccCChHHHHHHh
Confidence 36799999999986321 01122222 3466774 55699999743221100000122223333
Q ss_pred CCCe-eecCCCcccCCCCCCCcchhhhhhhhccCCCCCC--------CC---CCCceEEEEeC--eEEEEEecccCCCC-
Q 012895 206 SRPW-MVTEGNHEIESIPIILPHAFKAYNARWLMPYEES--------GS---SSNLYYSFDIA--GAHIIMLGSYTDFD- 270 (454)
Q Consensus 206 ~~P~-~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~--------~~---~~~~~ys~~~g--~v~fi~Lds~~~~~- 270 (454)
.+++ ++++||||+...... ...+......+..|.-.+ +. ....|..+..+ ++.++++.......
T Consensus 89 ~lgyDa~t~GNHEfd~g~~~-l~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~~~y~i~~~~~~~i~i~g~~~~~~~~~ 167 (322)
T d3c9fa2 89 KQDYDLLTIGNHELYLWENS-KQEYETVVNHFQDKYVCSNVDIRLDNGLFVPLGLKYKYFTTPIRGIRVMAFGFLFDFKR 167 (322)
T ss_dssp TSCCSEECCCGGGSSSHHHH-HHHHHHHHHHTTTTBBCSSEEEECTTSCEEESSBSCEEEECTTTCCEEEEEECCCCCCC
T ss_pred ccCCcEEeecceecccchHH-HHHHHHHHHhcCCCEEeeeEEecCCCCcccccCCceEEEEECCCcEEEEEEeecccccc
Confidence 4444 678999999543210 001112222333343211 00 12345556655 37777775432211
Q ss_pred --C-----CHH---HHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhc-C-CcEEEecccc
Q 012895 271 --E-----DSA---QYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNA-R-VDVVFAGHVH 338 (454)
Q Consensus 271 --~-----~~~---Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~-~-v~lvl~GH~H 338 (454)
. ... +..|+.+.+ +++.+.+|+++|.++-... . ........+.+.. + ++++|.||.|
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~D~IV~l~H~g~~~d~------~-~~~~~~~~la~~~~~~~~~iigGHsH 236 (322)
T d3c9fa2 168 FNSGTRVTPMAETIHEPWFQEAL----KHEVDLIIIVGHTPISHNW------G-EFYQVHQYLRQFFPDTIIQYFGGHSH 236 (322)
T ss_dssp CCTTEEECCHHHHTTSHHHHHHT----TSCCSEEEEECSSCCCTTT------C-HHHHHHHHHHHHCTTSEEEEEECSSC
T ss_pred CCCCcEEeCHHHHHHHHHHHHHH----hCCCCEEEEEecCCccccc------c-ccchHHHHHHHhCCCCCEEEeccccc
Confidence 1 111 123333332 2366778999998753211 1 1112222222222 3 4469999999
Q ss_pred c
Q 012895 339 A 339 (454)
Q Consensus 339 ~ 339 (454)
.
T Consensus 237 ~ 237 (322)
T d3c9fa2 237 I 237 (322)
T ss_dssp C
T ss_pred c
Confidence 6
|
| >d2z1aa2 d.159.1.2 (A:28-329) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Thermus thermophilus [TaxId: 274]
Probab=97.98 E-value=7.9e-05 Score=68.98 Aligned_cols=172 Identities=17% Similarity=0.081 Sum_probs=87.3
Q ss_pred CeEEEEEecCCCCCC------------------hHHHHHHhhcCCCC-eEeecCccccCCCChhhHHHHhhhhhhhhcCC
Q 012895 147 PIEFAIVGDLGQTEW------------------TNSTLDHVGSKDYD-VFLLPGDLSYADFQQPLWDSFGRLVEPYASSR 207 (454)
Q Consensus 147 ~~~f~~igD~~~~~~------------------~~~~l~~i~~~~pd-~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~ 207 (454)
.++|++.+|+|..-. ....++++++..++ ++|-+||++..... ..+..-...++.+..--
T Consensus 2 tl~IlhtnD~Hg~l~~~~~~~~~~~~~~gG~ar~~t~i~~~r~~~~~~l~ldaGD~~~Gs~~-~~~~~g~~~~~~~n~~g 80 (302)
T d2z1aa2 2 TLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLY-FNQYRGLADRYFMHRLR 80 (302)
T ss_dssp EEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHH-HHHHTTHHHHHHHHHTT
T ss_pred EEEEEEEcccccCcccccccccCCccccCcHHHHHHHHHHHHHhCCCeEEEEcCCCCCCCHh-HhhhcchhHHHHHHhcc
Confidence 368999999985421 12345666555554 56779999864321 11111111222222223
Q ss_pred CeeecCCCcccCCCCCCCcchhhhhhhhccCCCCCC------C----CCCCceEEEEeCeEEE--EEecccC--------
Q 012895 208 PWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEES------G----SSSNLYYSFDIAGAHI--IMLGSYT-------- 267 (454)
Q Consensus 208 P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~------~----~~~~~~ys~~~g~v~f--i~Lds~~-------- 267 (454)
.=..++||||+..... .+..+.....+|.-.. . ..-..|..++.+++++ |++-+..
T Consensus 81 yDa~~~GNHEfd~G~~----~l~~~~~~~~~p~l~aNi~~~~~~~~~~~~~~y~i~~~~g~kIgiiG~~t~~~~~~~~~~ 156 (302)
T d2z1aa2 81 YRAMALGNHEFDLGPG----PLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTTPDTREISNPG 156 (302)
T ss_dssp CCEEECCGGGGTTCHH----HHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEECTTHHHHSCCC
T ss_pred cccccccchhhhcChh----HHHHHhhhcccceeEeeeeccccccccCccceeEEEEECCeEEEEEeccccccccccccc
Confidence 3466999999964322 2222222222222110 0 0123466678888655 4443310
Q ss_pred -C--CCCCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhc-CCcEEEecccccce
Q 012895 268 -D--FDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNA-RVDVVFAGHVHAYE 341 (454)
Q Consensus 268 -~--~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~-~v~lvl~GH~H~y~ 341 (454)
. +....+..++..+.|++ ++.+.+|++.|.... .-..+.++. ++|+++.||.|...
T Consensus 157 ~~~~~~d~~~~~~~~~~~l~~---~~~DiiV~l~H~g~~---------------~d~~la~~~~giD~ii~gh~h~~~ 216 (302)
T d2z1aa2 157 PTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGYG---------------EDLKLARRLVGVQVIVGGHSHTLL 216 (302)
T ss_dssp TTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHH---------------HHHHHHTTCSSCCEEEECSSCCCB
T ss_pred CcccccCHHHHHHHHHHHhhc---cCCCEEEEeeccCcc---------------hhhHHHhcCCCeeeeecCccceee
Confidence 0 01112333444444443 255679999998631 112233333 69999999999844
|
| >d1tdqa2 b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.57 E-value=0.00055 Score=50.53 Aligned_cols=72 Identities=18% Similarity=0.276 Sum_probs=50.0
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEeC
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCG 131 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv~ 131 (454)
+|..+.+...+.+++.|.|.-+..+ ..-.|+|....+......... ...+-...+.|+||+|++.|.++|.
T Consensus 3 aP~~l~v~~~~~~sv~v~W~~p~~~~~~y~v~y~~~~~~~~~~~~~~--------~~~~~~~~~~i~~L~p~t~Y~~~V~ 74 (92)
T d1tdqa2 3 APKNLRVGSRTATSLDLEWDNSEAEAQEYKVVYSTLAGEQYHEVLVP--------KGIGPTTKTTLTDLVPGTEYGVGIS 74 (92)
T ss_dssp CCEEEEEEEECSSCEEEEEECCSSCCSEEEEEEEETTCCCCEEEEEE--------CCSSSEEEEEECSCCTTCEEEEEEE
T ss_pred cCcCCEEEEecCCEEEEEEEecCCcccceEEEEEEcCCCcceeeEEE--------ecCCCeeEEEECCccCCCEEEEEEE
Confidence 6888888888899999999876533 445677876554322221111 1233456789999999999999996
Q ss_pred c
Q 012895 132 G 132 (454)
Q Consensus 132 ~ 132 (454)
.
T Consensus 75 a 75 (92)
T d1tdqa2 75 A 75 (92)
T ss_dssp E
T ss_pred E
Confidence 4
|
| >d1x5xa1 b.1.2.1 (A:8-103) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.50 E-value=0.00018 Score=53.77 Aligned_cols=81 Identities=12% Similarity=0.190 Sum_probs=49.0
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCCC----c-cEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKEA----E-SVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~~----~-~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
.|..+.+...+.+++.|.|..+.... . -.++|.............. .. ...+.|+||+|++.|.
T Consensus 3 ~P~~~~v~~~~~~si~l~W~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~---------~~--~~~~~v~~L~p~t~Y~ 71 (96)
T d1x5xa1 3 MPASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYD---------GE--DLAYTVKNLRRSTKYK 71 (96)
T ss_dssp CCCCCEEEEECSSEEEEECCCCSSCCSSSSCEEEEEECCSSSSCCCEEEEE---------ES--CSEEEEESCCSSCEEE
T ss_pred cCCCCEEEEecCCEEEEEEEeecccCcceEeeeEEEeeeccceeeeEEeec---------CC--CCEEEECCCCCCCEEE
Confidence 45556677777899999998653221 1 2344443333222221111 11 1235688999999999
Q ss_pred EEeCc--------cCceeEEECCCC
Q 012895 128 YRCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 128 Yrv~~--------~s~~~~F~T~p~ 144 (454)
|||.. .|....|+|.|+
T Consensus 72 ~rV~A~n~~G~s~~S~~~~~~T~pd 96 (96)
T d1x5xa1 72 FKVIAYNSEGKSNPSEVVEFTTCPD 96 (96)
T ss_dssp EEEEEECSSCEEEECCCEEEECCCC
T ss_pred EEEEEEcCCcEeCCCCCEEEEeCcC
Confidence 99963 356778888874
|
| >d2b5ib2 b.1.2.1 (B:104-207) Interleukin-2 receptor beta chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-2 receptor beta chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.46 E-value=0.0003 Score=53.32 Aligned_cols=82 Identities=13% Similarity=0.197 Sum_probs=53.5
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCCC------ccEEEEeecCCCCce-EEEeEeEEEeeeeeecCeEEEEEECCCCCCC
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKEA------ESVVEYGKLPGRYNT-VATGEHTSYQFFFYKSGKIHHVKIGPLEPAT 124 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~~------~~~v~y~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 124 (454)
.+|..+++...+.+++.|+|....... .-.|+|......... .... .......+.|.+|+|+|
T Consensus 4 ~pP~~l~v~~~~~~s~~l~W~~p~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----------~~~~~~~~~i~~L~p~t 73 (104)
T d2b5ib2 4 MAPISLQVVHVETHRCNISWEISQASHYFERHLEFEARTLSPGHTWEEAPLLT----------LKQKQEWICLETLTPDT 73 (104)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSCCGGGTTCEEEEEEEECTTSCSTTSCCEE----------ECSCCCEEEECSCCTTC
T ss_pred CCCCCcEEEEEeCCEEEEEEccccccccccceeEEEEEEecccccceeeeEEe----------cCCCcEEEEECCCCCCC
Confidence 368889999998999999998875321 124556554432111 1100 12233446789999999
Q ss_pred EEEEEeCc------------cCceeEEECCC
Q 012895 125 TYYYRCGG------------RGPEFSFKMPP 143 (454)
Q Consensus 125 ~Y~Yrv~~------------~s~~~~F~T~p 143 (454)
.|.+||.. +|....|+|.|
T Consensus 74 ~Y~~rVra~~~~g~~g~wS~wS~~v~~~T~P 104 (104)
T d2b5ib2 74 QYEFQVRVKPLQGEFTTWSPWSQPLAFRTKP 104 (104)
T ss_dssp EEEEEEEEEESCCSSCCCCCCCCCEEEECCC
T ss_pred EEEEEEEEEECCCCCCCCCCCcCCEEEECCC
Confidence 99999863 25567888876
|
| >d1x4xa1 b.1.2.1 (A:8-100) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.39 E-value=0.00016 Score=53.92 Aligned_cols=73 Identities=25% Similarity=0.386 Sum_probs=47.1
Q ss_pred EEecCCCcEEEEEEeCCCCC----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEeCc--
Q 012895 59 ISLAAKDYIRVSWITDDKEA----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCGG-- 132 (454)
Q Consensus 59 l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv~~-- 132 (454)
|.....+++.|.|..+.... .-.|+|............+. .....|++|+|++.|.+||..
T Consensus 9 v~~~s~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-------------~~~~~i~~L~p~t~Y~~~V~A~n 75 (93)
T d1x4xa1 9 VTCRSATCAQVNWEVPLSNGTDVTEYRLEWGGVEGSMQICYCGP-------------GLSYEIKGLSPATTYYCRVQALS 75 (93)
T ss_dssp CEEEETTEEEEECCCCSCSSSCCCEEEEEEESSTTSCCEEEEES-------------CSEEEEESCCSSCEEEEEEEEEC
T ss_pred EEEeCCCeEEEEEEecccCCCeeEEEEEEEccCCCcceEeecCC-------------ccEEEEcccceeeEEEEEEEEEE
Confidence 44455789999998654322 24566665554433322221 123468999999999999953
Q ss_pred ------cCceeEEECCCC
Q 012895 133 ------RGPEFSFKMPPA 144 (454)
Q Consensus 133 ------~s~~~~F~T~p~ 144 (454)
.+....|+|+|.
T Consensus 76 ~~G~s~~S~~~~~~Tpps 93 (93)
T d1x4xa1 76 VVGAGPFSEVVACVTPPS 93 (93)
T ss_dssp SSCCCCBCCCEEEECCCC
T ss_pred CCcCcCCCCcEEEEeCCC
Confidence 356788999873
|
| >d1qg3a1 b.1.2.1 (A:1126-1217) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Integrin beta-4 subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.31 E-value=0.00079 Score=49.74 Aligned_cols=80 Identities=16% Similarity=0.192 Sum_probs=53.6
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEe
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRC 130 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv 130 (454)
.+|..+.+...+.+++.|.|.-+... ..-.|+|.............. .....+.|++|+|+|.|.+||
T Consensus 3 ~aP~n~~~~~~s~~si~l~W~~p~~~~~~Y~i~y~~~~~~~~~~~~~~-----------~~~~~~~i~~L~p~t~Y~~~V 71 (92)
T d1qg3a1 3 GAPQNPNAKAAGSRKIHFNWLPPSGKPMGYRVKYWIQGDSESEAHLLD-----------SKVPSVELTNLYPYCDYEMKV 71 (92)
T ss_dssp CCCEEEEEEECSTTCEEEEEECCSSCCCEEEEEEEETTSCGGGCEEEE-----------ESSSEEEECSCCTTCEEEEEE
T ss_pred CcCCCCEEEEccCCEEEEEEEecCCCccceEEeeeeccccccEEEEec-----------CCccEEEECCCCCCcEEEEEE
Confidence 46788888888899999999876432 345677776654322221111 112356789999999999999
Q ss_pred Cc--------cCceeEEECC
Q 012895 131 GG--------RGPEFSFKMP 142 (454)
Q Consensus 131 ~~--------~s~~~~F~T~ 142 (454)
.. .|....|+|+
T Consensus 72 ~A~n~~G~g~~S~~~~~~T~ 91 (92)
T d1qg3a1 72 CAYGAQGEGPYSSLVSCRTH 91 (92)
T ss_dssp EEECSSCBCCCCCCEEEECC
T ss_pred EEEeCCcCcCCCCCEEEEcC
Confidence 63 3456667764
|
| >d2djsa1 b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-B receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.29 E-value=0.00039 Score=51.81 Aligned_cols=80 Identities=14% Similarity=0.212 Sum_probs=50.0
Q ss_pred CeeEEEEecCCCcEEEEEEeCCCCCccE----EEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEE
Q 012895 54 PQQVHISLAAKDYIRVSWITDDKEAESV----VEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYR 129 (454)
Q Consensus 54 p~~v~l~~~~~~~~~v~W~t~~~~~~~~----v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yr 129 (454)
|..+++.....+++.|.|.-+....... |+|.............. .....+.|++|+|++.|.+|
T Consensus 4 ~~~l~~~~~t~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~-----------~~~~~~~i~~L~p~t~Y~~~ 72 (95)
T d2djsa1 4 VPIMHQVSATMRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSMAR-----------SQTNTARIDGLRPGMVYVVQ 72 (95)
T ss_dssp CSCCEEEEECSSEEEEECCCCSCCSSCEEEEEEEEEETTSCSTTCEEEE-----------ESSSEEEEESCCTTCEEEEE
T ss_pred CCccEEEeecCCEEEEEEEECCCCCcceEEeeeeeeeeccCcceeEeec-----------CCccEEEEeecCCccEEEEE
Confidence 4456677777899999998765433333 44444433222111111 01234678999999999999
Q ss_pred eCc--------cCceeEEECCCC
Q 012895 130 CGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 130 v~~--------~s~~~~F~T~p~ 144 (454)
|.. .|+...|+|.|+
T Consensus 73 V~A~n~~G~g~~S~~~~~~T~~d 95 (95)
T d2djsa1 73 VRARTVAGYGKFSGKMCFQTLTD 95 (95)
T ss_dssp EEEEESSCEEEECCCEEEECCCS
T ss_pred EEEEcCCCCCCCCCCEEEEeCCC
Confidence 963 356778898874
|
| >d2vkwa2 b.1.2.1 (A:601-693) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neural cell adhesion molecule 1, NCAM species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.29 E-value=0.00099 Score=49.44 Aligned_cols=79 Identities=18% Similarity=0.255 Sum_probs=51.6
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCCC----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKEA----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
.|..+.+...+.+++.|.|.-..... .-.|+|....+....... ......++.|++|+|++.|.+
T Consensus 3 ~P~~~~~~~~~~~sv~l~W~~p~~~~~~I~~Y~i~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p~t~Y~~ 71 (93)
T d2vkwa2 3 APKLEGQMGEDGNSIKVNLIKQDDGGSPIRHYLVRYRALSSEWKPEIR-----------LPSGSDHVMLKSLDWNAEYEV 71 (93)
T ss_dssp CCEEEEEECTTSSCEEEEEECCCCTTSCCCEEEEEEEETTSCCCCCEE-----------ECTTCCEEEECSCCTTCEEEE
T ss_pred CCccCEeEEcCCCEEEEEeeCCCCCcCceEEEEEEeeecCcceeeeee-----------ccCCceEEEEeccccceEEEE
Confidence 56777777777899999999875432 346777766543221111 122234577899999999999
Q ss_pred EeCc-------cCceeEEECC
Q 012895 129 RCGG-------RGPEFSFKMP 142 (454)
Q Consensus 129 rv~~-------~s~~~~F~T~ 142 (454)
||.. ......|+|.
T Consensus 72 ~V~A~N~~G~s~ps~~~~~T~ 92 (93)
T d2vkwa2 72 YVVAENQQGKSKAAHFVFRTA 92 (93)
T ss_dssp EEEEEETTEECCCEEEEEECC
T ss_pred EEEEEcCCCCcCCEeEEEEec
Confidence 9964 2235667774
|
| >d1x5fa1 b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.26 E-value=0.0011 Score=50.64 Aligned_cols=82 Identities=26% Similarity=0.359 Sum_probs=53.7
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCCC-----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKEA-----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 126 (454)
..|..+.+.....+++.|.|.-+.... .-.|.|.......+..... .......++|++|.|++.|
T Consensus 12 ~~P~~l~~~~~~~~sv~lsW~~P~~~~~~~i~~Y~v~~~~~~~~~~~~~~~----------~~~~~~~~~~~~L~p~t~Y 81 (107)
T d1x5fa1 12 SAPRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVENT----------SHPGEMQVTIQNLMPATVY 81 (107)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCEEEEC----------SSTTCSEEEECSCCTTCEE
T ss_pred cCCCccEEEEecCCEEEEEEECCccCCCCceEEEEEEEEeCCCCceEEEEE----------eCCCccEEEecCCCCCCEE
Confidence 468888888888999999998652211 2356666544333222211 1223456789999999999
Q ss_pred EEEeCc--------cCceeEEECCC
Q 012895 127 YYRCGG--------RGPEFSFKMPP 143 (454)
Q Consensus 127 ~Yrv~~--------~s~~~~F~T~p 143 (454)
.+||.. .+....++|.|
T Consensus 82 ~~rV~A~n~~G~g~~S~~i~v~T~~ 106 (107)
T d1x5fa1 82 IFRVMAQNKHGSGESSAPLRVETQP 106 (107)
T ss_dssp EEEEEEECSSCEEEECCCEEEECCC
T ss_pred EEEEEEEeCCCCcCCCCCEEEECCC
Confidence 999964 24566777766
|
| >d2ibga1 b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Hedgehog receptor iHog species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=97.20 E-value=0.00066 Score=50.61 Aligned_cols=71 Identities=17% Similarity=0.238 Sum_probs=44.7
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCCC-----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKEA-----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
.|..+.+.....+++.|.|..+.... .-.|+|.............. .........|+||+|+|.|.
T Consensus 9 ~P~~~~v~~~s~tsv~l~W~~P~~~~~~~i~gY~i~y~~~~~~~~~~~~~~---------~~~~~~~~~i~~L~p~t~Y~ 79 (95)
T d2ibga1 9 VPELLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKATI---------EGAHARSFKIAPLETATMYE 79 (95)
T ss_dssp CCEECCCBCCSSSCEEEEEECCTTCCGGGCCEEEEEEEETTCCSCCEEEEE---------ECTTCCEEEECSCCTTCEEE
T ss_pred CCcCeEEEEeCCCEEEEEEEeeeeccCCcccccceeEeeeeecceeeeeec---------cCCceeEEEEeeccCCeEEE
Confidence 45666666666899999998653222 13677876544322111100 12234567899999999999
Q ss_pred EEeCc
Q 012895 128 YRCGG 132 (454)
Q Consensus 128 Yrv~~ 132 (454)
+||..
T Consensus 80 ~~V~A 84 (95)
T d2ibga1 80 FKLQS 84 (95)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99864
|
| >d1x5aa1 b.1.2.1 (A:8-101) Ephrin type-A receptor 1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-A receptor 1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.15 E-value=0.00043 Score=51.87 Aligned_cols=77 Identities=14% Similarity=0.195 Sum_probs=47.9
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCC-CCc----cEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDK-EAE----SVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~-~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 126 (454)
..|..+++.....+++.|+|.-... ... -.|+|....+. .... .. ..+++|+||+|+|.|
T Consensus 4 ~~p~~L~~~~~~~~si~vsW~~p~~~~~~~~i~Y~i~~~~~~~~--~~~~-----------~~--~t~~~i~~L~p~t~Y 68 (94)
T d1x5aa1 4 LSGLSLKLVKKEPRQLELTWAGSRPRNPGGNLSYELHVLNQDEE--WHQM-----------VL--EPRVLLTKLQPDTTY 68 (94)
T ss_dssp CCSCCCCEEEEETTEEEEECCCCCSSCCSSCCEEEEEEECSSCE--EEEE-----------ES--SSEEEEESCCSSCEE
T ss_pred CCCCceEEEEcCCCEEEEEEecccCCCCCcEEEEEEEEecCCce--EEEe-----------ec--cCEEEECCCCCCCEE
Confidence 3555666777779999999976532 122 23334333221 1100 11 124678999999999
Q ss_pred EEEeCc--------cCceeEEECCC
Q 012895 127 YYRCGG--------RGPEFSFKMPP 143 (454)
Q Consensus 127 ~Yrv~~--------~s~~~~F~T~p 143 (454)
.+||.. .|+...|+|.|
T Consensus 69 ~~rV~A~n~~G~g~~S~~~~~~T~P 93 (94)
T d1x5aa1 69 IVRVRTLTPLGPGPFSPDHEFRTSP 93 (94)
T ss_dssp EEEEEEECSSSCCCCCCCEEEECCC
T ss_pred EEEEEEEcCCcCcCCCCCEEEEeCC
Confidence 999963 36778899876
|
| >d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.13 E-value=0.0018 Score=49.28 Aligned_cols=84 Identities=18% Similarity=0.264 Sum_probs=51.0
Q ss_pred CCCCeeEEEEecC--CCcEEEEEEeCCCCC----ccEEEEeecCCCCceE-EEeEeEEEeeeeeecCeEEEEEECCCCCC
Q 012895 51 ESDPQQVHISLAA--KDYIRVSWITDDKEA----ESVVEYGKLPGRYNTV-ATGEHTSYQFFFYKSGKIHHVKIGPLEPA 123 (454)
Q Consensus 51 ~~~p~~v~l~~~~--~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~gL~p~ 123 (454)
...|..+.+.... .+++.|.|.-+.... .-.|.|.......... .... ..+-.+...|.+|+|+
T Consensus 12 ~~pP~~~~v~~~~~~~~sv~v~W~~P~~~~g~i~~Y~i~~~~~~~~~~~~~~~~~---------~~~~~~~~~i~~L~p~ 82 (111)
T d1x5ka1 12 TSPPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIEP---------VVGNRLTHQIQELTLD 82 (111)
T ss_dssp CSCCEEEEEEECSSCTTCEEEEEECCSCCSSCCCEEEEEEESCSSSCTTTSEEEE---------ESTTCSEEEECSCCSS
T ss_pred CCCCCCcEEEEecCCCCEEEEEEEccccCCCceeeeEEeeeecCCCCcceeEEEE---------eCCCeeEEEECCCCCC
Confidence 3457777777654 779999998764332 2245555443321110 0000 1222334678999999
Q ss_pred CEEEEEeCc--------cCceeEEECCC
Q 012895 124 TTYYYRCGG--------RGPEFSFKMPP 143 (454)
Q Consensus 124 t~Y~Yrv~~--------~s~~~~F~T~p 143 (454)
+.|.+||.. .|+...|+|+.
T Consensus 83 t~Y~~~V~A~n~~G~g~~S~~v~~~T~~ 110 (111)
T d1x5ka1 83 TPYYFKIQARNSKGMGPMSEAVQFRTPK 110 (111)
T ss_dssp SEEEEEEEEECSSCBCCCCCCEEEECCC
T ss_pred CEEEEEEEEEcCCCCcCCCCCEEEECCC
Confidence 999999963 35677888875
|
| >d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: lambda ser/thr protein phosphatase species: Bacteriophage lambda [TaxId: 10710]
Probab=97.12 E-value=0.00017 Score=63.10 Aligned_cols=63 Identities=25% Similarity=0.322 Sum_probs=44.1
Q ss_pred EEEEEecCCCCCCh-HHHHHHhh-cCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCccc
Q 012895 149 EFAIVGDLGQTEWT-NSTLDHVG-SKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEI 218 (454)
Q Consensus 149 ~f~~igD~~~~~~~-~~~l~~i~-~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 218 (454)
|+.++||+|..... .++++.+. ....|.++++||+++.+.... ...+++ ...-+.++.||||.
T Consensus 14 rI~vIgDIHG~~~~L~~lL~~i~~~~~~d~lv~lGD~vDrGp~s~---~vl~~l----~~~~~~~i~GNHE~ 78 (219)
T d1g5ba_ 14 NIWVVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVDRGAENV---ECLELI----TFPWFRAVRGNHEQ 78 (219)
T ss_dssp CEEEECCCTTCHHHHHHHHHHHTCCTTTCEEEECSCCSSSSSCHH---HHHGGG----GSTTEEECCCHHHH
T ss_pred eEEEEEecccCHHHHHHHHHHcCCCCCCCEEEEeCCccccCccHH---HHHHHh----hccccccccCcHHH
Confidence 78999999976432 45667775 356789999999998765432 112222 23458899999997
|
| >d1qr4a2 b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=97.09 E-value=0.0014 Score=47.97 Aligned_cols=69 Identities=22% Similarity=0.293 Sum_probs=46.8
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEeC
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCG 131 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv~ 131 (454)
.|..+.+.....+++.|.|.....+ ..-.|+|............- ..-...+.|+||+|++.|.++|.
T Consensus 3 ~P~~l~v~~v~~~s~~l~W~~~~~~~~~Y~i~~~~~~~~~~~~~~~-----------~~~~~~~~i~~L~p~t~Y~~~V~ 71 (88)
T d1qr4a2 3 SPKGISFSDITENSATVSWTPPRSRVDSYRVSYVPITGGTPNVVTV-----------DGSKTRTKLVKLVPGVDYNVNII 71 (88)
T ss_dssp CCSCEEEESCCSSCEEEEECCCSSCCSEEEEEEEETTCCCCEEEEE-----------ETTCCEEEECSCCSSCEEEEEEE
T ss_pred CCcceEEEEecCCEEEEEEEcccEeeceEEEEEEeccCCceEEEEe-----------cCCccEEEECCCCCCCEEEEEEE
Confidence 5677778777799999999866432 44577787665433222211 11223578999999999999986
Q ss_pred c
Q 012895 132 G 132 (454)
Q Consensus 132 ~ 132 (454)
.
T Consensus 72 a 72 (88)
T d1qr4a2 72 S 72 (88)
T ss_dssp E
T ss_pred E
Confidence 4
|
| >d1tena_ b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.06 E-value=0.002 Score=47.24 Aligned_cols=70 Identities=17% Similarity=0.237 Sum_probs=47.2
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEeC
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCG 131 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv~ 131 (454)
+|..+++.....+++.|.|.-+..+ ..-.|+|....+....... . ..+-...+.|.||+||+.|.++|.
T Consensus 4 ~P~~l~v~~~s~~s~~l~W~~p~~~~~~y~v~~~~~~~~~~~~~~------~----~~~~~~~~~i~~L~p~t~Y~~~V~ 73 (90)
T d1tena_ 4 APSQIEVKDVTDTTALITWFKPLAEIDGIELTYGIKDVPGDRTTI------D----LTEDENQYSIGNLKPDTEYEVSLI 73 (90)
T ss_dssp CCEEEEEESCCSSCEEEEEECCSSCCSEEEEEEEETTCTTCCEEE------E----EETTCCEEEECSCCTTCEEEEEEE
T ss_pred CCCCcEEEEecCCEEEEEEEeCceEeccEEEEEEEcCCCceeEEE------E----ecCCcceeeEeeecCCCEEEEEEE
Confidence 5788888877799999999876433 3457777765443222110 0 112234568999999999999986
Q ss_pred c
Q 012895 132 G 132 (454)
Q Consensus 132 ~ 132 (454)
.
T Consensus 74 a 74 (90)
T d1tena_ 74 S 74 (90)
T ss_dssp E
T ss_pred E
Confidence 4
|
| >d1owwa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.05 E-value=0.00095 Score=49.83 Aligned_cols=80 Identities=14% Similarity=0.224 Sum_probs=51.4
Q ss_pred CCeeEEEEecC--CCcEEEEEEeCCCC--CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 53 DPQQVHISLAA--KDYIRVSWITDDKE--AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 53 ~p~~v~l~~~~--~~~~~v~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
+|.++.|+... .+++.|+|..+... ..-.|+|....+....... . .++-...++|+||+||+.|.+
T Consensus 2 aP~~~~vt~~~~~~~s~~vsW~~P~~~~i~~Y~i~y~~~~~~~~~~~~------~----v~~~~~~~~l~gL~P~t~Y~v 71 (93)
T d1owwa_ 2 GPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKEA------T----IPGHLNSYTIKGLKPGVVYEG 71 (93)
T ss_dssp CCCEEECCCCSSCTTCEEEEEECCSSSCEEEEEEEEEETTCSSCCEEE------E----ECSSCCEEEECSCCSSEEEEE
T ss_pred cCcccEEEEccCCCCEEEEEeecccccceeEEEEEEeeccccceeeee------c----cCCCccEEEECCcccCcEEEE
Confidence 57788887766 58999999987421 2356778765433221110 0 223345678999999999999
Q ss_pred EeCc-------cCceeEEECC
Q 012895 129 RCGG-------RGPEFSFKMP 142 (454)
Q Consensus 129 rv~~-------~s~~~~F~T~ 142 (454)
+|.. +.....|+|.
T Consensus 72 ~v~av~~~G~s~~~~~~~tT~ 92 (93)
T d1owwa_ 72 QLISIQQYGHQEVTRFDFTTT 92 (93)
T ss_dssp EEEEEESSSCEEEEEEEEEEC
T ss_pred EEEEEeCCCccCcEEEEEEec
Confidence 9863 1234667763
|
| >d1x5la1 b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-A receptor 8 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.03 E-value=0.00078 Score=50.65 Aligned_cols=79 Identities=11% Similarity=0.203 Sum_probs=50.2
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCC----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKE----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
.|..+++...+.+++.|.|..+... ..-.|+|...+........- .......+|+||+|++.|.+
T Consensus 6 ~p~~~~~~~~s~~si~v~W~~P~~~~g~i~~Y~v~y~~~~~~~~~~~~~-----------~~~~~~~~i~~L~p~t~Y~~ 74 (98)
T d1x5la1 6 QVVVIRQERAGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQSYSTL-----------KAVTTRATVSGLKPGTRYVF 74 (98)
T ss_dssp CCCCEECSCBCSSCEEEEECCCSCCCSCCCEEEEEEEESSSCCSSCEEE-----------EESSSEEEECSCCTTCEEEE
T ss_pred CCCceEEEeccCCEEEEEEECCCCCCCCEEEEEEEeecccccceeeEEe-----------cCCceEEEECCCCCCCEEEE
Confidence 4556666666689999999876533 23457777654332221110 01124567899999999999
Q ss_pred EeCc--------cCceeEEECC
Q 012895 129 RCGG--------RGPEFSFKMP 142 (454)
Q Consensus 129 rv~~--------~s~~~~F~T~ 142 (454)
||.. .+....|+|.
T Consensus 75 ~V~a~n~~G~g~~S~~v~~~T~ 96 (98)
T d1x5la1 75 QVRARTSAGCGRFSQAMEVETG 96 (98)
T ss_dssp CEEEEETTEECCCCCCEEEECC
T ss_pred EEEEEcCCCCcCCCCCEEEEcC
Confidence 9953 3566778873
|
| >d1fnfa3 b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.01 E-value=0.0016 Score=47.65 Aligned_cols=70 Identities=13% Similarity=0.133 Sum_probs=47.5
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEeC
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCG 131 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv~ 131 (454)
.|..+.+...+.+++.|.|.-+..+ ..-.|+|............ . .+.-...+.|++|+|++.|.++|.
T Consensus 3 ~P~~l~v~~vt~~sv~l~W~~p~~~~~~Y~i~~~~~~~~~~~~~~-~---------v~~~~~~~~i~~L~p~t~Y~~~V~ 72 (89)
T d1fnfa3 3 SPTGIDFSDITANSFTVHWIAPRATITGYRIRHHPEHFSGRPRED-R---------VPHSRNSITLTNLTPGTEYVVSIV 72 (89)
T ss_dssp CCEEEEEESCCSSEEEEEEECCSSCCSEEEEEEECSCCSSCCEEE-E---------EETTCCEEEEESCCTTCEEEEEEE
T ss_pred cCcCCEEEEecCCEEEEEEEeCCCEEeeEEEEEEECCCCCceEEE-E---------ECCCccEEEECCCcccCEEEEEEE
Confidence 5778888877799999999876433 3456788766543322111 0 112234568899999999999996
Q ss_pred c
Q 012895 132 G 132 (454)
Q Consensus 132 ~ 132 (454)
.
T Consensus 73 a 73 (89)
T d1fnfa3 73 A 73 (89)
T ss_dssp E
T ss_pred E
Confidence 4
|
| >d2cuha1 b.1.2.1 (A:8-109) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.99 E-value=0.0015 Score=49.26 Aligned_cols=80 Identities=11% Similarity=0.125 Sum_probs=51.9
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEeC
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCG 131 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv~ 131 (454)
+|+.+++.....+++.|.|...... ..-.|+|...++...... ..+-.....|+||+|||.|.++|.
T Consensus 3 ~P~~l~~~~~t~~si~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~------------~~~~~~~~~l~~L~p~t~Y~~~V~ 70 (102)
T d2cuha1 3 GPTQLRALNLTEGFAVLHWKPPQNPVDTYDIQVTAPGAPPLQAE------------TPGSAVDYPLHDLVLHTNYTATVR 70 (102)
T ss_dssp SCEEEECCCCSSSCEEEEEECCSSCCSEEEEEEECSSSCCEEEE------------EETTCSEEEECSCCSSSEEEEEEE
T ss_pred CCCccEEEEeCCCEEEEEEEeeeccceeeEEEEEeccccceeee------------eeeeeeeEEEccEEeeEEEEEEEE
Confidence 5778888777799999999876433 345677765443221111 011223567999999999999996
Q ss_pred c-------cCceeEEECCCC
Q 012895 132 G-------RGPEFSFKMPPA 144 (454)
Q Consensus 132 ~-------~s~~~~F~T~p~ 144 (454)
. ......|+|++.
T Consensus 71 a~~~~~~s~~~~~~~~T~~~ 90 (102)
T d2cuha1 71 GLRGPNLTSPASITFTTGLE 90 (102)
T ss_dssp EEETTEECCCEEEEEESCCC
T ss_pred EEeCCCCcCCEEEEEECCCC
Confidence 3 223457888653
|
| >d1tdqa1 b.1.2.1 (A:1-93) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.95 E-value=0.0029 Score=46.72 Aligned_cols=71 Identities=14% Similarity=0.308 Sum_probs=47.6
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEe
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRC 130 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv 130 (454)
.+|..+.+.....+++.|+|.-+..+ ..-.|.|........... .. ...-...+.|.||+|+++|.++|
T Consensus 5 ~~P~~l~v~~v~~~si~v~W~~p~~~~~~y~i~~~~~~~~~~~~~------~~----~~~~~~~~~i~~L~p~t~Y~v~V 74 (93)
T d1tdqa1 5 DGPTQILVRDVSDTVAFVEWTPPRAKVDFILLKYGLVGGEGGKTT------FR----LQPPLSQYSVQALRPGSRYEVSI 74 (93)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSSCCSEEEEEEEESSSSCCCEE------EE----ECTTCSEEEECSCCTTCEEEEEE
T ss_pred CcCCCCEEEEeCCCEEEEEEEccccCCCceEEEEEeccCcceeeE------EE----eCCCceEEEEeCcccceEEEEEE
Confidence 46888888888888999999866443 345677776544322111 11 12223456899999999999999
Q ss_pred Cc
Q 012895 131 GG 132 (454)
Q Consensus 131 ~~ 132 (454)
..
T Consensus 75 ~a 76 (93)
T d1tdqa1 75 SA 76 (93)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >d1k85a_ b.1.2.1 (A:) Fibronectin type III domain from chitinase A1. {Bacillus circulans [TaxId: 1397]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type III domain from chitinase A1. species: Bacillus circulans [TaxId: 1397]
Probab=96.93 E-value=0.0037 Score=45.72 Aligned_cols=66 Identities=20% Similarity=0.366 Sum_probs=41.9
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCCCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEeC
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKEAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCG 131 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv~ 131 (454)
.+|..+.+.....+++.|+|.-... ......|....+. ..... ... -...++||+|++.|.|||.
T Consensus 5 ~~P~~l~~~~~~~~sv~lsW~~p~~-~~~i~~Y~i~~~~-~~~~~-----------~~~--t~~~~~~L~p~t~Y~~~V~ 69 (88)
T d1k85a_ 5 TAPTNLASTAQTTSSITLSWTASTD-NVGVTGYDVYNGT-ALATT-----------VTG--TTATISGLAADTSYTFTVK 69 (88)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSC-CSSEEEEEEEESS-SEEEE-----------ESS--SEEEECCCCSSCEEEEEEE
T ss_pred CCCCCcEEEEecCCEEEEEEeCCCC-CCCEEEEEEEccc-eEEEe-----------cCC--CEEEECCCCCCCEEEEEEE
Confidence 4678888887778999999976532 2345555443211 11111 111 1346899999999999996
Q ss_pred c
Q 012895 132 G 132 (454)
Q Consensus 132 ~ 132 (454)
.
T Consensus 70 A 70 (88)
T d1k85a_ 70 A 70 (88)
T ss_dssp E
T ss_pred E
Confidence 4
|
| >d2haza1 b.1.2.1 (A:489-589) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neural cell adhesion molecule 1, NCAM species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.90 E-value=0.0026 Score=47.86 Aligned_cols=83 Identities=17% Similarity=0.149 Sum_probs=48.6
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCCC-----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKEA-----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
.|.-..+ ....+++.|.|.-+.... .-.|+|................ .......+.|+||+|++.|.
T Consensus 5 ~P~~~~~-~~~~~sv~l~W~~P~~~gg~~I~~Y~v~~~~~~~~~~~~~~~~~~-------~~~~~~~~~i~~L~p~t~Y~ 76 (101)
T d2haza1 5 SPSIDQV-EPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAK-------EASMEGIVTIVGLKPETTYA 76 (101)
T ss_dssp CCEEEEE-EECSSCEEEEEECCSCCTTSCCCEEEEEEEETTCCCCEEEEEEHH-------HHHHHSEEEECSCCTTCEEE
T ss_pred CCccCEE-EeeCCEEEEEEeCCCcCccccEEEEEEEEeecCCcceeeeeeeee-------cccceeEEEecCCCCCeEEE
Confidence 4543333 334678999999764322 2356676654432222111100 11122346899999999999
Q ss_pred EEeCc--------cCceeEEECCC
Q 012895 128 YRCGG--------RGPEFSFKMPP 143 (454)
Q Consensus 128 Yrv~~--------~s~~~~F~T~p 143 (454)
+||.. .+....|+|.|
T Consensus 77 frV~A~N~~G~g~~S~~~~~~T~P 100 (101)
T d2haza1 77 VRLAALNGKGLGEISAASEFKTQP 100 (101)
T ss_dssp EEEEEEETTEECCCCCCEEEECCC
T ss_pred EEEEEEeCCcCcCCCCceeEEeCC
Confidence 99963 35667788877
|
| >d2cuma1 b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.89 E-value=0.0032 Score=46.39 Aligned_cols=69 Identities=16% Similarity=0.225 Sum_probs=45.9
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEe
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRC 130 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv 130 (454)
..|..+.+.....+++.|.|..+..+ ..-.|+|....+.. ... . .......+.|.||+||+.|.++|
T Consensus 3 ~~P~~l~~~~~~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~-~~~-------~----~~~~~~~~~i~~L~p~t~Y~~~V 70 (93)
T d2cuma1 3 EAPRDLEAKEVTPRTALLTWTEPPVRPAGYLLSFHTPGGQT-QEI-------L----LPGGITSHQLLGLFPSTSYNARL 70 (93)
T ss_dssp CCCEEEEEESCCSSCEEEEEECCSSCCSEEEEEEECTTSCE-EEE-------E----ECSSCSEEEECSCCTTCEEEEEE
T ss_pred CcCCCCEEEEeCCCEEEEEEEccccccccEEEEEEcccccc-EEE-------E----ECCCccEEEEeCccCCCEEEEEE
Confidence 35777777777789999999887533 44567776654321 111 0 11223456899999999999999
Q ss_pred Cc
Q 012895 131 GG 132 (454)
Q Consensus 131 ~~ 132 (454)
..
T Consensus 71 ~a 72 (93)
T d2cuma1 71 QA 72 (93)
T ss_dssp EE
T ss_pred EE
Confidence 63
|
| >d1fnha2 b.1.2.1 (A:93-182) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.88 E-value=0.0038 Score=45.75 Aligned_cols=70 Identities=21% Similarity=0.253 Sum_probs=47.1
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEe
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRC 130 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv 130 (454)
..|..+++.....+++.|.|.-+..+ ..-.|+|....+....... ...-.....|++|+||+.|.++|
T Consensus 3 spP~~l~v~~~~~~si~v~W~~p~~~~~~Y~i~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p~t~Y~~~V 71 (90)
T d1fnha2 3 SPPRRARVTDATETTITISWRTKTETITGFQVDAVPANGQTPIQRT-----------IKPDVRSYTITGLQPGTDYKIYL 71 (90)
T ss_dssp CCCEEEEEEEECSSEEEEEEECCSSCCCCEEEEEEESSSSCCEEEE-----------CCTTCSEEEEESCCTTCEEEEEE
T ss_pred CcCCCCEEEEecCCEEEEEEECCCCCCceeEEEEEEccCCceEEEe-----------cCCCccEEEeCCCCCCcEEEEEE
Confidence 35788889888899999999865433 3446677665443222111 11223455789999999999998
Q ss_pred Cc
Q 012895 131 GG 132 (454)
Q Consensus 131 ~~ 132 (454)
..
T Consensus 72 ~a 73 (90)
T d1fnha2 72 YT 73 (90)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >d1iarb2 b.1.2.1 (B:97-197) Interleukin-4 receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-4 receptor alpha chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.88 E-value=0.0025 Score=47.75 Aligned_cols=73 Identities=10% Similarity=0.081 Sum_probs=40.1
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCCCc-------cEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCC
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKEAE-------SVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPAT 124 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~~~-------~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 124 (454)
.+|..|.|.....+++.|.|..+..... -.|+|....+..+...... ....-...+.|.+|+|+|
T Consensus 3 ~~P~~l~v~~~~~~s~~v~W~~P~~~~~~~~~~~~y~v~y~~~~~~~~~~~~~~--------~~~~~~~~~~i~~L~p~t 74 (101)
T d1iarb2 3 RAPGNLTVHTNVSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFRIYNV--------TYLEPSLRIAASTLKSGI 74 (101)
T ss_dssp CCCEEEEEC----CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSCSCEEEEEE--------CSSCCEEEECC-----CC
T ss_pred ccCCcCEEEEEeCCeEEEEEccccCCCCccceeeEEEEeeecccceeeeeeeee--------ccCccceEEEECCCCCCC
Confidence 3677777776678899999998743221 3677766654433222111 122334567899999999
Q ss_pred EEEEEeCc
Q 012895 125 TYYYRCGG 132 (454)
Q Consensus 125 ~Y~Yrv~~ 132 (454)
.|.+||..
T Consensus 75 ~Y~~rVrA 82 (101)
T d1iarb2 75 SYRARVRA 82 (101)
T ss_dssp CEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999974
|
| >d1fnfa2 b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.88 E-value=0.0046 Score=45.18 Aligned_cols=70 Identities=19% Similarity=0.293 Sum_probs=46.2
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCC--CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEe
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKE--AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRC 130 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv 130 (454)
.|..+++...+.+++.|.|.-.... ..-.|+|....+....... . ..+-...+.|+||+|+|.|.++|
T Consensus 3 pP~~l~~~~~~~~sv~l~W~~p~~~~~~~y~v~y~~~~~~~~~~~~------~----~~~~~~~~~i~~L~p~t~Y~~~V 72 (91)
T d1fnfa2 3 PPTDLRFTNIGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVAEL------S----ISPSDNAVVLTNLLPGTEYVVSV 72 (91)
T ss_dssp CCEEEEEESCCSSCEEEEEECCTTCCCSEEEEEEEETTCTTCCEEE------E----ECTTCCEEEECSCCTTCEEEEEE
T ss_pred cCCceEEEEeCCCEEEEEEEecCCCCcceeEEEEEECCCCccEEEE------E----eCCCceEEEEeceeCCCEEEEEE
Confidence 4777888877799999999876422 2346778765543222111 0 12233457899999999999999
Q ss_pred Cc
Q 012895 131 GG 132 (454)
Q Consensus 131 ~~ 132 (454)
..
T Consensus 73 ~a 74 (91)
T d1fnfa2 73 SS 74 (91)
T ss_dssp EE
T ss_pred EE
Confidence 63
|
| >d1fnha1 b.1.2.1 (A:3-92) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.88 E-value=0.0025 Score=46.64 Aligned_cols=70 Identities=11% Similarity=0.091 Sum_probs=46.0
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEeC
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCG 131 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv~ 131 (454)
.|..+.+...+.+++.|.|...... ..-.++|............ . ...-....+|+||+||+.|.+||.
T Consensus 2 pP~~l~~~~v~~~si~l~W~~p~~~~~~~~i~~~~~~~~~~~~~~-~---------~~~~~~~~~i~~L~p~t~Y~~~V~ 71 (90)
T d1fnha1 2 APTDLKFTQVTPTSLSAQWTPPNVQLTGYRVRVTPKEKTGPMKEI-N---------LAPDSSSVVVSGLMVATKYEVSVY 71 (90)
T ss_dssp CCEEEEEEEECSSCEEEEEECCSSCCSEEEEEEEESSSCSCCCEE-E---------ECTTCCEEEECSCCTTCEEEEEEE
T ss_pred CCCCEEEEEecCCEEEEEEEccceeccceEEEEEeeeCCCceEEE-E---------eCCCCeEEEEecccCceEEEEEEE
Confidence 4778888888899999999887533 3456667655432221111 0 111123468999999999999996
Q ss_pred c
Q 012895 132 G 132 (454)
Q Consensus 132 ~ 132 (454)
.
T Consensus 72 a 72 (90)
T d1fnha1 72 A 72 (90)
T ss_dssp E
T ss_pred E
Confidence 4
|
| >d1x5za1 b.1.2.1 (A:8-109) Receptor-type tyrosine-protein phosphatase delta, PTPRD {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Receptor-type tyrosine-protein phosphatase delta, PTPRD species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.87 E-value=0.0014 Score=49.43 Aligned_cols=80 Identities=19% Similarity=0.294 Sum_probs=49.5
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC--CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE--AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYR 129 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yr 129 (454)
..|..+.+.....+++.|+|..+... ..-.|+|............. ... ....|+||+|++.|.+|
T Consensus 12 ~~P~~~~~~~~~~~si~l~W~~p~~~~i~~Y~i~y~~~~~~~~~~~~~----------~~~--~~~~i~~L~p~t~Y~~~ 79 (102)
T d1x5za1 12 GQPLNFKAEPESETSILLSWTPPRSDTIANYELVYKDGEHGEEQRITI----------EPG--TSYRLQGLKPNSLYYFR 79 (102)
T ss_dssp CCCEEEEEECSSSSEEEEEEECCSCCCCCEEEECBEESSSCCCBCCEE----------CSS--SEEEEECCCTTCEEEEC
T ss_pred cCCCCeEEEEccCCEEEEEEECCCCCCccceEEEEEeCCCCceEEEEc----------CCc--CEEEECCCCCCCEEEEE
Confidence 36788888877789999999875321 22355565543321111110 111 23568999999999999
Q ss_pred eCc--------cCceeEEECCC
Q 012895 130 CGG--------RGPEFSFKMPP 143 (454)
Q Consensus 130 v~~--------~s~~~~F~T~p 143 (454)
|.. .+....|+|+.
T Consensus 80 V~A~n~~G~g~~S~~v~~~T~e 101 (102)
T d1x5za1 80 LAARSPQGLGASTAEISARTMQ 101 (102)
T ss_dssp EEEECSSCEEEECCCEEEECCC
T ss_pred EEEEcCCCEeCCCCCEEEEcCC
Confidence 863 24556677753
|
| >d1x4ya1 b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Brother of CDO precursor (BOC) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.84 E-value=0.0023 Score=47.96 Aligned_cols=83 Identities=12% Similarity=0.120 Sum_probs=52.2
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC------CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE------AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATT 125 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 125 (454)
.+|..+++.....+++.|.|...... ..-.|.|...++.......... ..+......|.+|+|++.
T Consensus 3 ~~P~~~~~~~~s~tsi~v~W~~~~~~~~~~~i~~Y~v~y~~~~~~~~~~~~~~~--------~~~~~~~~~i~~L~p~t~ 74 (101)
T d1x4ya1 3 AGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDM--------VEGDRYWHSISHLQPETS 74 (101)
T ss_dssp SCCEEEEEECSSSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCCEE--------EETTCCEEEECSCCTTCE
T ss_pred CCCcccEEEEEcCCEEEEEEecCcccccccceEEEEEEeeeccceeeeeeeEEE--------EcCCeeEEEEcCCCCCCE
Confidence 57888889988899999999865321 1235677665433221111000 112223456899999999
Q ss_pred EEEEeCc--------cCceeEEECC
Q 012895 126 YYYRCGG--------RGPEFSFKMP 142 (454)
Q Consensus 126 Y~Yrv~~--------~s~~~~F~T~ 142 (454)
|.+||.. .|+...++|.
T Consensus 75 Y~~~v~a~n~~G~s~~S~~~~~~T~ 99 (101)
T d1x4ya1 75 YDIKMQCFNEGGESEFSNVMICETK 99 (101)
T ss_dssp EEEEEEEECTTCCCCCCCCEEEECC
T ss_pred EEEEEEEEcCCCCCCCCCcEEEEcc
Confidence 9999963 3566777774
|
| >d1qr4a1 b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=96.83 E-value=0.0038 Score=45.37 Aligned_cols=68 Identities=13% Similarity=0.218 Sum_probs=46.7
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEeC
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCG 131 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv~ 131 (454)
+|..+++.....+++.|.|.-+... ..-.|+|.......... . .+.-.....|+||+|++.|.++|.
T Consensus 2 aP~~l~v~~~t~~sv~v~W~~p~~~~~~Y~v~~~~~~~~~~~~------~------~~~~~~~~~~~~L~p~t~Y~v~V~ 69 (87)
T d1qr4a1 2 NPKDLEVSDPTETTLSLRWRRPVAKFDRYRLTYVSPSGKKNEM------E------IPVDSTSFILRGLDAGTEYTISLV 69 (87)
T ss_dssp CCEEEEEESCCSSEEEEEEECCSSCCSEEEEEEECTTCCEEEE------E------ECTTCSEEEEESCCSSCEEEEEEE
T ss_pred cCcCcEEEEecCCEEEEEEECCCCCcceeEEEeecCCcceeEE------e------CCCCcCEEEECCCCcCCEEEEEEE
Confidence 6888888888899999999976533 34577777654321111 0 112234568999999999999986
Q ss_pred c
Q 012895 132 G 132 (454)
Q Consensus 132 ~ 132 (454)
.
T Consensus 70 a 70 (87)
T d1qr4a1 70 A 70 (87)
T ss_dssp E
T ss_pred E
Confidence 3
|
| >d1fnha3 b.1.2.1 (A:183-271) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.81 E-value=0.0016 Score=47.64 Aligned_cols=70 Identities=19% Similarity=0.258 Sum_probs=46.4
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEeC
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCG 131 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv~ 131 (454)
+|..+.+.....+++.|.|.-+... ..-.|+|........... . ....-...+.|++|.||+.|.+||.
T Consensus 3 aP~nl~v~~~~~~s~~l~W~~p~~~i~~Y~i~~~~~~~~~~~~~-~---------~~~~~~~~~~~~~L~p~t~Y~~~V~ 72 (89)
T d1fnha3 3 APSNLRFLATTPNSLLVSWQPPRARITGYIIKYEKPGSPPREVV-P---------RPRPGVTEATITGLEPGTEYTIYVI 72 (89)
T ss_dssp CCEEEEEEEEETTEEEEEEECCSSCCSEEEEEEECTTSCCEECT-T---------CCCTTCCEEEEESCCTTCEEEEEEE
T ss_pred cCcCCEEEEecCCEEEEEEeCCCcCCceEEEEEeeccCCccEEE-E---------EcCCCccEEEEEeeeCCCEEEEEEE
Confidence 5778888877799999999876433 334677776543211100 0 0112234578899999999999996
Q ss_pred c
Q 012895 132 G 132 (454)
Q Consensus 132 ~ 132 (454)
.
T Consensus 73 a 73 (89)
T d1fnha3 73 A 73 (89)
T ss_dssp E
T ss_pred E
Confidence 4
|
| >d2b5ic1 b.1.2.1 (C:130-224) Cytokine receptor common gamma chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor common gamma chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.81 E-value=0.0026 Score=47.32 Aligned_cols=69 Identities=13% Similarity=0.216 Sum_probs=48.5
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC--CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE--AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYR 129 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yr 129 (454)
.+|+.+.|.....+++.|.|..+... -.-.|+|............ . . .....+|.+|.|++.|.+|
T Consensus 4 ~~P~nl~v~~~~~~~v~l~W~~p~~~~~~~y~v~y~~~~~~~~~~~~-~---------~--~~~~~~~~~L~p~t~Y~fr 71 (95)
T d2b5ic1 4 WAPENLTLHKLSESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQS-V---------D--YRHKFSLPSVDGQKRYTFR 71 (95)
T ss_dssp CCCEEEEEEEEETTEEEEEEECSSCSTTCEEEEEEEETTCSSCEEEE-E---------C--SSCEEEECSCCTTSCEEEE
T ss_pred cCCCCCEEEEEeCCEEEEEECCCCCceeEEEEEEEEcCCCceeeEee-e---------c--ccceeEcCCCCCCCEEEEE
Confidence 47888888877789999999987532 3457788776543322211 1 1 1235778999999999999
Q ss_pred eCc
Q 012895 130 CGG 132 (454)
Q Consensus 130 v~~ 132 (454)
|..
T Consensus 72 VRa 74 (95)
T d2b5ic1 72 VRS 74 (95)
T ss_dssp EEE
T ss_pred EEE
Confidence 975
|
| >d2gysa2 b.1.2.1 (A:104-217) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.79 E-value=0.0052 Score=47.03 Aligned_cols=83 Identities=22% Similarity=0.336 Sum_probs=51.8
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCCC----------ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCC
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKEA----------ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLE 121 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~~----------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~ 121 (454)
..|..|+|... .+++.|+|..+.... .-.|+|.............. .......+.+.+|.
T Consensus 7 ~pP~nl~v~~~-~~~~~lsW~~P~~~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~L~ 76 (114)
T d2gysa2 7 PEPRDLQISTD-QDHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQDSWEDAAILL---------SNTSQATLGPEHLM 76 (114)
T ss_dssp CCCEEEEEEEE-TTEEEEEEECCC-----CCSCGGGEEEEEEEEETTSCSTTCEEEE---------ESSSEEEECTTTCC
T ss_pred CcCCCeEEEEe-CCEEEEECCCCcccccccceeeeEEEEEEEEeccCCceEEEEEee---------ccCceEEEEeCCCC
Confidence 36777887643 568999999874321 12466666543322111111 12234467889999
Q ss_pred CCCEEEEEeCc--------------cCceeEEECCCC
Q 012895 122 PATTYYYRCGG--------------RGPEFSFKMPPA 144 (454)
Q Consensus 122 p~t~Y~Yrv~~--------------~s~~~~F~T~p~ 144 (454)
|++.|.+||.. +|+...|+|+|.
T Consensus 77 p~t~Y~~rVRa~~~~g~~~~g~wS~WS~~v~~~t~pg 113 (114)
T d2gysa2 77 PSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPG 113 (114)
T ss_dssp TTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCC
T ss_pred CCcEEEEEEEEEeCCCCCCCCCccCCcCCEeeeCcCC
Confidence 99999999952 356788999884
|
| >d1va9a1 b.1.2.1 (A:8-116) Down syndrome cell adhesion molecule-like protein 1, DSCAML1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Down syndrome cell adhesion molecule-like protein 1, DSCAML1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.76 E-value=0.0033 Score=47.65 Aligned_cols=77 Identities=16% Similarity=0.193 Sum_probs=48.8
Q ss_pred CCCCCeeEEEEecCCCcEEEEEEeCCCCC------ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCC
Q 012895 50 SESDPQQVHISLAAKDYIRVSWITDDKEA------ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPA 123 (454)
Q Consensus 50 ~~~~p~~v~l~~~~~~~~~v~W~t~~~~~------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~ 123 (454)
+...|..+.+...+.+++.|.|....... .-.|+|.............. . ........++.|++|+|+
T Consensus 8 P~~pP~~v~v~~~~~~si~l~W~~p~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~i~~L~p~ 81 (109)
T d1va9a1 8 PDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIV--E----MKATGDSEVYTLDNLKKF 81 (109)
T ss_dssp CSSCCEEEEEEECSSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCBCC--B----CCCCSSEEEEEEESCCSS
T ss_pred CCCCCcCcEEEEecCCEEEEEEcCCCCCCCCCcEEEEEEEEeeccccccceeeee--E----EecCCCeeEEEECCCCcc
Confidence 34568889998888999999999763221 12566665543221110000 0 012334567789999999
Q ss_pred CEEEEEeCc
Q 012895 124 TTYYYRCGG 132 (454)
Q Consensus 124 t~Y~Yrv~~ 132 (454)
|.|.+||..
T Consensus 82 t~Y~~~V~a 90 (109)
T d1va9a1 82 AQYGVVVQA 90 (109)
T ss_dssp CCEEEEEEE
T ss_pred eEEEEEEEE
Confidence 999999964
|
| >d1cd9b2 b.1.2.1 (B:108-213) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.76 E-value=0.003 Score=47.97 Aligned_cols=64 Identities=11% Similarity=0.088 Sum_probs=38.3
Q ss_pred EEEecCCCcEEEEEEeCCCCCc----cEEEEeecCCCC-ceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEeC
Q 012895 58 HISLAAKDYIRVSWITDDKEAE----SVVEYGKLPGRY-NTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCG 131 (454)
Q Consensus 58 ~l~~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv~ 131 (454)
.+...+.+++.|.|........ -.|+|....+.. +..+. . ...-.+...|++|.|+|.|.+||.
T Consensus 15 ~~~~~~~~~i~v~W~pp~~~~~~~~~Y~i~y~~~~~~~~w~~v~-~---------~~~~~~~~~l~~L~p~t~Y~frVr 83 (106)
T d1cd9b2 15 DVVSHQPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLVF-H---------LPSSKDQFELCGLHQAPVYTLQMR 83 (106)
T ss_dssp -----CCSCEEEEEECCGGGTTSCEEEEEEEEESSTTCCCEEEE-E---------EESCEEEEEECCCCSCSCEEEEEE
T ss_pred eEecCCCCEEEEEEcCcccCCccceEEEEEEeeccccccceeee-c---------ccCCceEEEEeccCCCeEEEEEEE
Confidence 3455557899999987643332 377787654332 22221 1 112345567899999999999995
|
| >d2d9qb2 b.1.2.1 (B:204-308) Granulocyte colony-stimulating factor (GC-SF) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.74 E-value=0.0034 Score=47.48 Aligned_cols=69 Identities=13% Similarity=0.114 Sum_probs=39.7
Q ss_pred CeeEEEEecCCCcEEEEEEeCCCCC----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEE
Q 012895 54 PQQVHISLAAKDYIRVSWITDDKEA----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYR 129 (454)
Q Consensus 54 p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yr 129 (454)
|..+.+...+.+++.|.|.-..... .-.|+|....+......... ..+-.+...|++|+|+|.|.+|
T Consensus 10 P~~p~~~~~~~~~v~l~W~pp~~~~~~~~~y~i~y~~~~~~~~~~~~~~---------~~~~~~~~~i~~L~p~t~Y~fr 80 (105)
T d2d9qb2 10 DPSPEAAPPQAGCLQLSWEPWQPGLHINQKCELRHKPQRGEASWALVGP---------LPLEALQYELCGLLPATAYTLQ 80 (105)
T ss_dssp CC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSSCCCCEEEEE---------ECSCEEEEEECSCCSCCCEEEE
T ss_pred CCCCEeecCCCCeEEEEEcCCCCCCceeEEEEEEEEecCCccceeeeec---------ccCCcceeEEecccCCeEEEEE
Confidence 3334455556889999998764322 24566776544322222111 2334566789999999999999
Q ss_pred eC
Q 012895 130 CG 131 (454)
Q Consensus 130 v~ 131 (454)
|.
T Consensus 81 Vr 82 (105)
T d2d9qb2 81 IR 82 (105)
T ss_dssp EE
T ss_pred EE
Confidence 95
|
| >d1x4za1 b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Brother of CDO precursor (BOC) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.73 E-value=0.0029 Score=48.26 Aligned_cols=72 Identities=25% Similarity=0.321 Sum_probs=43.7
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCC----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKE----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
.|..+.+...+.+++.|.|.-.... ..-.|+|............... .......++|++|+|++.|.|
T Consensus 13 ~P~~~~v~~~~~~sv~l~W~p~~~~g~~I~~Y~v~~~~~~~~~~~~~~~~~--------~~~~~~~~~v~~L~p~t~Y~f 84 (108)
T d1x4za1 13 APDRPTISTASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATSA--------IPPSRLSVEITGLEKGISYKF 84 (108)
T ss_dssp CCCCCEEEECCSSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEEEE--------ECTTCCEEEEESCCTTCEEEE
T ss_pred cCCCCEEEEccCCEEEEEEECCCCCCCccEEEEEEEEecCCCCceEEEEEe--------ecCCccEEEECCCCCCCEEEE
Confidence 5566667767788999999543222 2245667655443222211110 122334567899999999999
Q ss_pred EeCc
Q 012895 129 RCGG 132 (454)
Q Consensus 129 rv~~ 132 (454)
||..
T Consensus 85 rV~A 88 (108)
T d1x4za1 85 RVRA 88 (108)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9975
|
| >d1x5ga1 b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.72 E-value=0.0026 Score=47.95 Aligned_cols=77 Identities=17% Similarity=0.179 Sum_probs=48.6
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCCC----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKEA----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
.|..+.+.....+++.|+|..+.... .-.|+|...+.......... .....|+||+|+|.|.+
T Consensus 13 ~P~~l~v~~~s~~si~l~W~~P~~~~g~i~~Y~v~~~~~~~~~~~~~~~~-------------~~~~~i~~L~p~t~Y~~ 79 (103)
T d1x5ga1 13 PAPNLRAYAASPTSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQDVDVS-------------SHSYTINGLKKYTEYSF 79 (103)
T ss_dssp CCSSCEEEEEETTEEEEECCCCSCCSSCCSEEEEEEEETTCCCCCCEEEC-------------SSEEEECSCCTTCEEEE
T ss_pred cCCCcEEEEccCCEEEEEEECCcCCCccEEEEEEEEEeCCCceeEEEecc-------------ccEEecCCCCCCCEEEE
Confidence 56667777777899999998654321 23466766544332222111 12356899999999999
Q ss_pred EeCc--------cCceeEEECC
Q 012895 129 RCGG--------RGPEFSFKMP 142 (454)
Q Consensus 129 rv~~--------~s~~~~F~T~ 142 (454)
+|.. .|....++|.
T Consensus 80 ~V~A~n~~G~g~~S~~v~v~T~ 101 (103)
T d1x5ga1 80 RVVAYNKHGPGVSTPDVAVRTL 101 (103)
T ss_dssp EEEEECSSCCCCBCCCCCEECC
T ss_pred EEEEEcCCcCcCCCCCEEEEcC
Confidence 9863 2345566664
|
| >d1tdqa3 b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.72 E-value=0.0034 Score=45.63 Aligned_cols=68 Identities=13% Similarity=0.284 Sum_probs=46.6
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEeC
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCG 131 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv~ 131 (454)
.|..+.+.....+++.|.|.-.... ..-.|+|....+....... .+-..++.|+||.|||.|.++|.
T Consensus 3 ~P~nl~v~~~~~~s~~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~~------------~~~~~~~~~~~L~p~t~Y~v~V~ 70 (86)
T d1tdqa3 3 SPRDLMVTASSETSISLIWTKASGPIDHYRITFTPSSGISSEVTV------------PRDRTSYTLTDLEPGAEYIISIT 70 (86)
T ss_dssp CCEEEEEEEECSSCEEEEEECCCSCCSEEEEEEECSSSCCEEEEE------------ESSCSEEEECCCCTTCCEEEEEE
T ss_pred cCCCCEEEEecCCEEEEEEeCCCCCccceEEEEecccccceEEEe------------CCCccEEEECCCccccEEEEEEE
Confidence 5778888888899999999887533 3457778765432221111 11223578999999999999986
Q ss_pred c
Q 012895 132 G 132 (454)
Q Consensus 132 ~ 132 (454)
.
T Consensus 71 a 71 (86)
T d1tdqa3 71 A 71 (86)
T ss_dssp E
T ss_pred E
Confidence 4
|
| >d1t70a_ d.159.1.9 (A:) Putative phosphatase DR1281 {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Putative phosphatase DR1281 species: Deinococcus radiodurans [TaxId: 1299]
Probab=96.70 E-value=0.016 Score=50.57 Aligned_cols=177 Identities=19% Similarity=0.249 Sum_probs=99.6
Q ss_pred eEEEEEecCCCCCChH----HHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCC
Q 012895 148 IEFAIVGDLGQTEWTN----STLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPI 223 (454)
Q Consensus 148 ~~f~~igD~~~~~~~~----~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~ 223 (454)
+|++++||.-.. ... +.|..++ .+.||||..|.++-.+.- -..+.+.++++ ..+-+ .+.|||=+...
T Consensus 1 MkILfiGDIvG~-~Gr~~v~~~Lp~lk-~~~DfVIaNgENaa~G~G-it~~~~~~l~~---~GvDv-iT~GNH~wdkk-- 71 (255)
T d1t70a_ 1 MRVLFIGDVFGQ-PGRRVLQNHLPTIR-PQFDFVIVNMENSAGGFG-MHRDAARGALE---AGAGC-LTLGNHAWHHK-- 71 (255)
T ss_dssp CEEEEECCBBHH-HHHHHHHHHHHHHG-GGCSEEEEECTBTTTTSS-CCHHHHHHHHH---HTCSE-EECCTTTTSST--
T ss_pred CeEEEEecCCCH-HHHHHHHHHhHHHH-hhCCEEEECCccCCCCcC-CCHHHHHHHHH---cCCcE-EEcCchhhcch--
Confidence 589999998322 223 3344454 468999999999864321 11122222221 23555 48999998532
Q ss_pred CCcchhhhhh----hhccCCCCC--CCCCCCceEEEEeCeEEEEEecc--cCCCCCCHHHHHHHHHHHHhhccCCCCeEE
Q 012895 224 ILPHAFKAYN----ARWLMPYEE--SGSSSNLYYSFDIAGAHIIMLGS--YTDFDEDSAQYKWLKADLAKINRKKTPWIF 295 (454)
Q Consensus 224 ~~~~~~~~~~----~~~~~p~~~--~~~~~~~~ys~~~g~v~fi~Lds--~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~I 295 (454)
....|. .+...|.+- .+.++..|+.++..+.++.++|- .........-..-+++.|++. +.+.+|
T Consensus 72 ----ei~~~i~~~~~~ilRP~N~p~~~~PG~G~~i~~~~g~ki~ViNl~Gr~fM~~~d~PF~~~d~~l~~~---~~~~i~ 144 (255)
T d1t70a_ 72 ----DIYPMLSEDTYPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNPFRTMDALLERD---DLGTVF 144 (255)
T ss_dssp ----THHHHHHTTCSCEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCHHHHHHHHTTCS---SCCEEE
T ss_pred ----hHHHHHhhcchhhhhhhccCCCCCCCceEEEEeeccCcEEEEEeccccccCcccCHHHHHHHHHhhc---CCCeEE
Confidence 222332 122334332 23456778888888866666653 221122222334455555543 455678
Q ss_pred EEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccc---eeeecccCCCcCCCCcEEEE
Q 012895 296 VLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAY---ERFTRIYDNKADPCGPIYIT 360 (454)
Q Consensus 296 v~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y---~r~~~~~~~~~~~~g~~yi~ 360 (454)
|=+|.= ......+|. .+-+-+|.+|+-=|+|.- +|.. |+|+-|++
T Consensus 145 VDfHaE-----------aTSEK~A~g-~~ldGrvsav~GTHTHV~TaD~rIl--------p~GTay~T 192 (255)
T d1t70a_ 145 VDFHAE-----------ATSEKEAMG-WHLAGRVAAVIGTHTHVPTADTRIL--------KGGTAYQT 192 (255)
T ss_dssp EEEECS-----------CHHHHHHHH-HHHTTSSSEEEEESSCSCBSCCEEE--------TTTEEEES
T ss_pred EEccch-----------hHHHHHHHH-hhhcCcEEEEEecCcccccccceEe--------cCCcEEEe
Confidence 888852 222333433 334568999999999983 3333 57898986
|
| >d2z06a1 d.159.1.10 (A:1-252) Hypothetical protein TTHA0625 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TTHA0625-like domain: Hypothetical protein TTHA0625 species: Thermus thermophilus [TaxId: 274]
Probab=96.65 E-value=0.027 Score=48.93 Aligned_cols=186 Identities=18% Similarity=0.266 Sum_probs=100.4
Q ss_pred eEEEEEecCCCCCChHH----HHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCC
Q 012895 148 IEFAIVGDLGQTEWTNS----TLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPI 223 (454)
Q Consensus 148 ~~f~~igD~~~~~~~~~----~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~ 223 (454)
+|++++||.-.. ..++ .|..++ .+.||||..|.++-.+.- -..+.+.+++ ...+-+ .+.|||=+....
T Consensus 1 MkiLfiGDIvG~-~Gr~~v~~~Lp~Lk-~~~DfVIaNgENaa~G~G-it~k~~~~L~---~~GVDv-IT~GNH~wdkke- 72 (252)
T d2z06a1 1 MRVLFIGDVMAE-PGLRAVGLHLPDIR-DRYDLVIANGENAARGKG-LDRRSYRLLR---EAGVDL-VSLGNHAWDHKE- 72 (252)
T ss_dssp CEEEEECCBCHH-HHHHHHHHHHHHHG-GGCSEEEEECTTTTTTSS-CCHHHHHHHH---HHTCCE-EECCTTTTSCTT-
T ss_pred CeEEEEeccCCH-HHHHHHHHHhHHHH-hhCCEEEEeeeccCCCcC-CCHHHHHHHH---HhCCCE-EEcCcccccchh-
Confidence 589999998432 2233 334443 468999999999764321 1111222221 123555 489999985321
Q ss_pred CCcchhhhhhh--hccCCCCC-CCCCCCceEEEEeCeEEEEEecc--cCCCCCCHHHHHHHHHHHHhhccCCCCeEEEEE
Q 012895 224 ILPHAFKAYNA--RWLMPYEE-SGSSSNLYYSFDIAGAHIIMLGS--YTDFDEDSAQYKWLKADLAKINRKKTPWIFVLL 298 (454)
Q Consensus 224 ~~~~~~~~~~~--~~~~p~~~-~~~~~~~~ys~~~g~v~fi~Lds--~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~ 298 (454)
...|.+ +.-.|.|- .+.++..|+.++.++.++.++|- .......+.-..-+++.+.+. +.+.+||=+
T Consensus 73 -----i~~~i~~~~llRP~N~p~~~PG~G~~i~~~~g~ki~ViNl~Gr~fm~~~d~PF~~~d~~~~~~---~~~~i~VDf 144 (252)
T d2z06a1 73 -----VYALLESEPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRALDRLLEEE---KADYVLVEV 144 (252)
T ss_dssp -----HHHHHHHSSEECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHHHHHHHHHC---CCSEEEEEE
T ss_pred -----hhhhhccccccchhhccCCCCCCcEEEEccCCceEEEEEecccccCCCCCCHHHHHHHHHhhc---CccEEEEEc
Confidence 112221 22234332 23455678888888877777663 211111222233344444433 456678888
Q ss_pred ccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCCcCCCCcEEEE-ECCCCC
Q 012895 299 HAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYIT-IGDGGN 366 (454)
Q Consensus 299 H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~-~G~gG~ 366 (454)
|.= ......+|. .+-.-+|.+|+-=|+|.--.-.++ -|+|+-|++ .|.-|.
T Consensus 145 HaE-----------aTSEK~A~g-~~ldGrvsavvGTHTHV~TaD~rI-----Lp~GTayiTDvGM~G~ 196 (252)
T d2z06a1 145 HAE-----------ATSEKMALA-HYLDGRASAVLGTHTHVPTLDATR-----LPKGTLYQTDVGMTGT 196 (252)
T ss_dssp ECS-----------CHHHHHHHH-HHHBTTBSEEEEESSCSCBSCCEE-----CTTSCEEESCCCCBEE
T ss_pred ccc-----------hhhhheeee-EecCCCEEEEEecCccccccccEE-----ecCCeEEEccCccccc
Confidence 852 222333333 334568999999999983221111 157999986 344443
|
| >d1t71a_ d.159.1.9 (A:) Hypothetical protein MPN349 {Mycoplasma pneumoniae [TaxId: 2104]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Hypothetical protein MPN349 species: Mycoplasma pneumoniae [TaxId: 2104]
Probab=96.57 E-value=0.026 Score=49.97 Aligned_cols=183 Identities=20% Similarity=0.207 Sum_probs=98.3
Q ss_pred CCeEEEEEecCCCCCChHHH----HHHhh-cCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCC
Q 012895 146 FPIEFAIVGDLGQTEWTNST----LDHVG-SKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIES 220 (454)
Q Consensus 146 ~~~~f~~igD~~~~~~~~~~----l~~i~-~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~ 220 (454)
..+|++++||.-.. ..+.+ |..++ +.++||||..|.++-.+.- -..+.+.+++ ...+-+ .+.|||=+..
T Consensus 3 ~~MkILfiGDIvG~-~GR~~v~~~Lp~Lr~~~~iDfVIaNgENaa~G~G-it~k~~~eL~---~~GvDv-IT~GNH~wd~ 76 (281)
T d1t71a_ 3 NSIKFIFLGDVYGK-AGRNIIKNNLAQLKSKYQADLVIVNAENTTHGKG-LSLKHYEFLK---EAGVNY-ITMGNHTWFQ 76 (281)
T ss_dssp CCCEEEEECEEBHH-HHHHHHHTTHHHHHHHHTCSEEEEECTBTTTTSS-CCHHHHHHHH---HHTCCE-EECCTTTTCC
T ss_pred ccceEEEEEccCCH-HHHHHHHHHhHHHHHHhCCCEEEECCccCCCCcC-CCHHHHHHHH---HhCCcE-EEcCchhhhc
Confidence 46899999998322 23333 33343 6799999999999864321 1112222221 123555 4899998853
Q ss_pred CCCCCcchhhhhh---hhccCCCCC-----CCCCCCceEEEEeCeEEEEEeccc--CCCC--CCHHHHHHHHHHHHhhcc
Q 012895 221 IPIILPHAFKAYN---ARWLMPYEE-----SGSSSNLYYSFDIAGAHIIMLGSY--TDFD--EDSAQYKWLKADLAKINR 288 (454)
Q Consensus 221 ~~~~~~~~~~~~~---~~~~~p~~~-----~~~~~~~~ys~~~g~v~fi~Lds~--~~~~--~~~~Q~~WL~~~L~~~~~ 288 (454)
. ....|. .+.-.|.|- .+.++..|..++.++.++.++|-. .... .-.....-+++.+.+
T Consensus 77 k------ei~~~i~~~~~llRP~N~p~~~p~~~pG~G~~i~~~~~~~i~Vinl~G~~fm~~~~~~~pf~~~~~~~~~--- 147 (281)
T d1t71a_ 77 K------LDLAVVINKKDLVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPFKTTNPFKVLKELILK--- 147 (281)
T ss_dssp G------GGHHHHTTCTTEECBSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSSCBCCHHHHHHHHHTT---
T ss_pred h------hhHHHHhhcccccccccccccccCCCCCceEEEEEccccceeeeeeccccccccccccHHHHHHHHhhcc---
Confidence 2 222222 122223331 123456688888877666666532 1111 112223334444433
Q ss_pred CCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCCcCCCCcEEEE
Q 012895 289 KKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYIT 360 (454)
Q Consensus 289 ~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~ 360 (454)
.+.+.+||=+|.= ......+|. .+-+-+|.+|+-=|+|.----.++ -++|+-|++
T Consensus 148 ~~~d~i~VDfHaE-----------ATSEK~A~g-~~lDGrvsaVvGTHTHV~TaD~rI-----Lp~GTAyiT 202 (281)
T d1t71a_ 148 RDCDLHIVDFHAE-----------TTSEKNAFC-MAFDGYVTTIFGTHTHVPSADLRI-----TPKGSAYIT 202 (281)
T ss_dssp CCCSEEEEEEECS-----------CHHHHHHHH-HHHTTTSSEEEEESSSSCCTTCEE-----CTTSCEEES
T ss_pred cCCCeEEEEeccc-----------hhhhhhhhe-eeeCCcEEEEEecCcccccCcccc-----ccCCeEEEe
Confidence 2566788888852 222333333 334568999999999983211111 257899986
|
| >d1erna2 b.1.2.1 (A:117-221) Erythropoietin (EPO) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Erythropoietin (EPO) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.57 E-value=0.011 Score=44.34 Aligned_cols=71 Identities=13% Similarity=0.149 Sum_probs=43.5
Q ss_pred CCCeeEEEEecC-CCcEEEEEEeCCCC--C---ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCE
Q 012895 52 SDPQQVHISLAA-KDYIRVSWITDDKE--A---ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATT 125 (454)
Q Consensus 52 ~~p~~v~l~~~~-~~~~~v~W~t~~~~--~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 125 (454)
..|..+.+.... ...+.|.|..+... . .-.|+|.......+..... ...-...+.|.+|+|+|.
T Consensus 6 dPP~nl~v~~~~~~~~l~v~W~~P~~~~~~~~~~Y~v~y~~~~~~~~~~~~~----------~~~~~t~~~i~~L~p~t~ 75 (105)
T d1erna2 6 DAPVGLVARLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGNGAGSVQRVE----------ILEGRTECVLSNLRGRTR 75 (105)
T ss_dssp CCCEEEEEEECCC-CCEEEEEECSSSCSCGGGEEEEEEEEEC-CCCEEEEEE----------ECTTCCEEEECSCCSSCE
T ss_pred CCCCCCEEEEecCCCcEEEEeeeccccccceEEEEEEEEecCCCCCceEEEe----------ecCCccEEEEeCCCCCcE
Confidence 467788888876 66799999876422 1 1366676654332221111 111123567999999999
Q ss_pred EEEEeCc
Q 012895 126 YYYRCGG 132 (454)
Q Consensus 126 Y~Yrv~~ 132 (454)
|.+||..
T Consensus 76 Y~~rVRa 82 (105)
T d1erna2 76 YTFAVRA 82 (105)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999953
|
| >d1x5ja1 b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.52 E-value=0.0032 Score=46.95 Aligned_cols=70 Identities=17% Similarity=0.231 Sum_probs=43.5
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCCC--------ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCC
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKEA--------ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPA 123 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~~--------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~ 123 (454)
..|..|.+.....+++.|+|.....+. .-.|+|...+.......... .. ...+.|.||+|+
T Consensus 3 ~pP~~v~~~~~s~tsi~v~W~~p~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~---------~~--~~~~~i~~L~p~ 71 (100)
T d1x5ja1 3 MPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNAN---------AT--TLSYLVTGLKPN 71 (100)
T ss_dssp CCCEEEEEEEEETTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSSCCCEECC---------BC--SSEEEEESCCTT
T ss_pred CCCcCeEEEEecCCEEEEEEcCCccccccceeeEEEEEEEeeecCCCcceeEecC---------CC--ccEEEECCCCCC
Confidence 357788888888999999998643211 22455555443222111111 11 124678999999
Q ss_pred CEEEEEeCc
Q 012895 124 TTYYYRCGG 132 (454)
Q Consensus 124 t~Y~Yrv~~ 132 (454)
|.|.+||..
T Consensus 72 t~Y~~~V~a 80 (100)
T d1x5ja1 72 TLYEFSVMV 80 (100)
T ss_dssp CEECCEEEE
T ss_pred CEEEEEEEE
Confidence 999999963
|
| >d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.52 E-value=0.0029 Score=49.32 Aligned_cols=87 Identities=17% Similarity=0.228 Sum_probs=51.7
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC---C---ccEEEEeecCCCCc---eEEEeEeEEEeeeeeecCeEEEEEECCCCC
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE---A---ESVVEYGKLPGRYN---TVATGEHTSYQFFFYKSGKIHHVKIGPLEP 122 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~---~---~~~v~y~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p 122 (454)
..|+.|.+.....+++.|.|...... . ...+.|........ ......... ..+-..+++|.+|+|
T Consensus 16 ~~P~~v~v~~~~~~si~l~W~~p~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~i~~L~p 89 (125)
T d1uena_ 16 VAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILT------FQGSKTHGMLPGLEP 89 (125)
T ss_dssp CCCSSCEEEEEETTEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCEEEEE------EESSCSEEEEESCCS
T ss_pred CCCcccEEEEecCCEEEEEEeCccCCCCCcceeeEEeEEEeecCCccceeecccceEEE------eCCCccEEEECCCCC
Confidence 45777888877789999999765311 1 12344443322111 111111111 122344688999999
Q ss_pred CCEEEEEeCc--------cCceeEEECCCC
Q 012895 123 ATTYYYRCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 123 ~t~Y~Yrv~~--------~s~~~~F~T~p~ 144 (454)
+|.|.+||.. .+....|+|++.
T Consensus 90 ~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 119 (125)
T d1uena_ 90 FSHYTLNVRVVNGKGEGPASPDRVFNTPEG 119 (125)
T ss_dssp SCEEEEEEEEEESSCEEEECCCEEEECCCC
T ss_pred CCEEEEEEEEEeCCcccCCCCCEEEECCCC
Confidence 9999999963 356778999764
|
| >d1x5ya1 b.1.2.1 (A:8-105) Myosin binding protein C, fast-type {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Myosin binding protein C, fast-type species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.51 E-value=0.0029 Score=47.35 Aligned_cols=71 Identities=17% Similarity=0.203 Sum_probs=46.0
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC-----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE-----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 126 (454)
..|..+.+.....+++.|.|.-+... ..-.|+|...+...+..... .......++|+||+||+.|
T Consensus 3 ~~P~~~~v~~~~~~sv~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~----------~~~~~~~~~v~~L~~~~~Y 72 (98)
T d1x5ya1 3 SAPQHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANK----------EPVERCGFTVKDLPTGARI 72 (98)
T ss_dssp CCCEEEEEEEECSSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEESSS----------SCBSSSEEEEECCCTTCCE
T ss_pred CCCcCcEEEEccCCEEEEEEECCCcCCCCCceEEEEEEEecCcceeEEeee----------ecCceeEEEECCCcCCeEE
Confidence 46778888877789999999865322 22466777665433322110 1111234578999999999
Q ss_pred EEEeCc
Q 012895 127 YYRCGG 132 (454)
Q Consensus 127 ~Yrv~~ 132 (454)
.|||..
T Consensus 73 ~frV~A 78 (98)
T d1x5ya1 73 LFRVVG 78 (98)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999975
|
| >d1fnfa1 b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.50 E-value=0.0096 Score=43.93 Aligned_cols=72 Identities=14% Similarity=0.196 Sum_probs=45.8
Q ss_pred CCCeeEEEEecC-CCcEEEEEEeCCCC--CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 52 SDPQQVHISLAA-KDYIRVSWITDDKE--AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 52 ~~p~~v~l~~~~-~~~~~v~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
..|..+++.... .+.+.|.|.-...+ ..-.|+|....+.......- . ..+-...+.|+||+|||.|..
T Consensus 3 ~PP~~l~v~~~~~ts~i~v~W~~p~~~~i~~Y~v~y~~~~~~~~~~~~~-----~----~~~~~~~~~i~~L~p~t~Y~v 73 (94)
T d1fnfa1 3 SPPTNLHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLEE-----V----VHADQSSCTFDNLSPGLEYNV 73 (94)
T ss_dssp CCCEEEEEEECSSSSCEEEEEECCSCSSCCEEEEEEEETTTCSSCCEEE-----E----ECTTCCEEECCCCCTTSCEEE
T ss_pred CcCcCcEEEEecCCCEEEEEeeCCCCCCeeEEEEEEEEecccCceEEEE-----E----eCCCccEEEECCCCCCCEEEE
Confidence 457888888665 56689999876432 23467787654332211110 0 122345678999999999999
Q ss_pred EeCc
Q 012895 129 RCGG 132 (454)
Q Consensus 129 rv~~ 132 (454)
+|..
T Consensus 74 ~V~a 77 (94)
T d1fnfa1 74 SVYT 77 (94)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9864
|
| >d2cuia1 b.1.2.1 (A:6-106) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.46 E-value=0.0021 Score=48.22 Aligned_cols=77 Identities=13% Similarity=0.160 Sum_probs=46.2
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCCCceEEE--eEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGRYNTVAT--GEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
..|..+++.-.+.+++.|.|...... ....|+|............ ....... ..+-.....|.+|+|++.|.+
T Consensus 5 p~~~~l~v~~~t~~sv~v~W~pp~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~v~~L~p~t~Y~~ 80 (101)
T d2cuia1 5 PRLSQLSVTDVTTSSLRLNWEAPPGAFDSFLLRFGVPSPSTLEPHPRPLLQRELM----VPGTRHSAVLRDLRSGTLYSL 80 (101)
T ss_dssp CCCCCCEEESCCSSCEEEECCCCTTSCSEEEEEEECCCCSSSCCCSSCCCCEEEE----EETTCCEEEECSCCTTCEEEE
T ss_pred cCCCCcEEEEECCCEEEEEEEeccccccceEEEEEecCCCceeeccCCcceeEee----cccceeEEEeCCCCcCCEEEE
Confidence 35667778877789999999655322 3457777765432111100 0001111 223344567899999999999
Q ss_pred EeCc
Q 012895 129 RCGG 132 (454)
Q Consensus 129 rv~~ 132 (454)
+|..
T Consensus 81 ~V~a 84 (101)
T d2cuia1 81 TLYG 84 (101)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9964
|
| >d1f6fb2 b.1.2.1 (B:101-203) Prolactin receptor {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Prolactin receptor species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.40 E-value=0.016 Score=43.22 Aligned_cols=68 Identities=15% Similarity=0.226 Sum_probs=41.6
Q ss_pred CCeeEEEEec----CCCcEEEEEEeCCCC----C----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCC
Q 012895 53 DPQQVHISLA----AKDYIRVSWITDDKE----A----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPL 120 (454)
Q Consensus 53 ~p~~v~l~~~----~~~~~~v~W~t~~~~----~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL 120 (454)
.|..+.+... ..+++.|+|..+... . .-.|+|...+...+...... ....+.|.+|
T Consensus 5 pP~nl~~~~~~~~~~~~~v~vsW~pP~~~~~~~~~~~l~Y~v~~~~~~~~~~~~~~~~------------~~~~~~i~~L 72 (103)
T d1f6fb2 5 PPRNLTLEVKQLKDKKTYLWVKWSPPTITDVKTGWFTMEYEIRLKPEEAEEWEIHFTG------------HQTQFKVFDL 72 (103)
T ss_dssp CCEEEEEEEC----CCCCEEEEEECCTTSCTTTTSSCEEEEEEEEESSCSCCEEEEEE------------TCSEEEECCC
T ss_pred CCCCCEEEEEecccCCCEEEEEECCCCcccCCCCcEEEEEEEEEEeCCCcceeeeccc------------ceeEEEeCCC
Confidence 4565555432 267899999987421 1 23556666554433322111 1235678999
Q ss_pred CCCCEEEEEeCc
Q 012895 121 EPATTYYYRCGG 132 (454)
Q Consensus 121 ~p~t~Y~Yrv~~ 132 (454)
.||+.|.+||..
T Consensus 73 ~p~t~Y~~rVra 84 (103)
T d1f6fb2 73 YPGQKYLVQTRC 84 (103)
T ss_dssp CTTCEEEEEEEE
T ss_pred CcceEEEEEEEE
Confidence 999999999963
|
| >d1x5ha1 b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.33 E-value=0.0048 Score=47.75 Aligned_cols=83 Identities=18% Similarity=0.298 Sum_probs=51.2
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC-Cc-cE----EEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE-AE-SV----VEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATT 125 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~-~~-~~----v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 125 (454)
..|..+.+...+.+++.|.|...... .. .. |+|...... ..... . ...+-...+.|+||+|++.
T Consensus 13 ~~P~~v~~~~~~~~si~v~W~~p~~~~~ng~i~~Y~v~y~~~~~~------~~~~~-~---~~~~~~~~~~i~~L~p~t~ 82 (119)
T d1x5ha1 13 AAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRK------SDVTE-T---LVSGTQLSQLIEGLDRGTE 82 (119)
T ss_dssp CCCEEEEEECCSSSEEEEEEECCCTTTCCSCEEEEBCEEEETTEE------EEEEC-C---BCCTTCCEEEEECCCSSCE
T ss_pred CCCcCeEEEEecCcEEEEEEEcccccCCCCCEEEEEEEEeecccc------cceee-e---ecCCCccEEEeCCCCCCCE
Confidence 46888888888889999999865321 11 22 333332210 00000 0 1223345678999999999
Q ss_pred EEEEeCc--------cCceeEEECCCC
Q 012895 126 YYYRCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 126 Y~Yrv~~--------~s~~~~F~T~p~ 144 (454)
|.+||.. .|....|+|++.
T Consensus 83 Y~~~V~A~n~~G~G~~S~~~~~~T~~~ 109 (119)
T d1x5ha1 83 YNFRVAALTINGTGPATDWLSAETFES 109 (119)
T ss_dssp EEEECEEEETTEEEEECCCEEEECCSS
T ss_pred EEEEEEEEcCCcCCCCCCCEEEEeCCC
Confidence 9999963 356778888654
|
| >d2ic2a1 b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Hedgehog receptor iHog species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.31 E-value=0.007 Score=45.83 Aligned_cols=77 Identities=16% Similarity=0.271 Sum_probs=40.3
Q ss_pred eEEEEecCCCcEEEEEEeCCCCCcc----EEEEeecCCCCc-eEEEeEeEE-EeeeeeecCeEEEEEECCCCCCCEEEEE
Q 012895 56 QVHISLAAKDYIRVSWITDDKEAES----VVEYGKLPGRYN-TVATGEHTS-YQFFFYKSGKIHHVKIGPLEPATTYYYR 129 (454)
Q Consensus 56 ~v~l~~~~~~~~~v~W~t~~~~~~~----~v~y~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~l~gL~p~t~Y~Yr 129 (454)
.+.+.-...+++.|+|..+...+.. .|+|........ ......... ..............+|+||+|++.|.+|
T Consensus 5 ~p~v~~~~~~sv~l~W~~P~~~g~~I~~Y~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~fr 84 (107)
T d2ic2a1 5 PPNVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQHTYRFR 84 (107)
T ss_dssp CCEEEECC---EEEEEEEECCSSCCEEEEEEEEEECC---CCEEEEEEEECCSCSCSSSSEEEEEEEECSCCSSEEEEEE
T ss_pred CCEEEEEECCEEEEEEEeCccccCCceEEEEEEEeccCCCcceEEEeeeeccceeeeecccceeEEEECCCcCCcEEEEE
Confidence 3346666688999999987544333 355554433222 222111100 0000112334567899999999999999
Q ss_pred eCc
Q 012895 130 CGG 132 (454)
Q Consensus 130 v~~ 132 (454)
|..
T Consensus 85 V~A 87 (107)
T d2ic2a1 85 ILA 87 (107)
T ss_dssp EEE
T ss_pred EEE
Confidence 964
|
| >d3d48r2 b.1.2.1 (R:101-204) Prolactin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Prolactin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.31 E-value=0.016 Score=43.15 Aligned_cols=78 Identities=15% Similarity=0.257 Sum_probs=43.3
Q ss_pred CCeeEEEEec----CCCcEEEEEEeCCCC----Ccc----EEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCC
Q 012895 53 DPQQVHISLA----AKDYIRVSWITDDKE----AES----VVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPL 120 (454)
Q Consensus 53 ~p~~v~l~~~----~~~~~~v~W~t~~~~----~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL 120 (454)
.|..+.+... ..+++.|.|..+... ... .++|............ ......+.|.+|
T Consensus 5 pP~~l~~~~~~~~~~~~~l~v~W~pP~~~~~~~~~~~~~Y~~~~~~~~~~~~~~~~------------~~~~~~~~i~~L 72 (104)
T d3d48r2 5 PPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEIHF------------AGQQTEFKILSL 72 (104)
T ss_dssp CCEEEEEECC------CCEEEEEECCTTCCCTTSSCCEEEEEEEEETTCSSCEEEE------------EETCSEEEECC-
T ss_pred CCCCCEEEEEeccCCCCeEEEEEeCCccccCCCCcEEEEEeeccccccccceeeec------------cccccEEEECCC
Confidence 5666666532 267899999986421 112 3444444332222111 112334678999
Q ss_pred CCCCEEEEEeCc---------cCceeEEECC
Q 012895 121 EPATTYYYRCGG---------RGPEFSFKMP 142 (454)
Q Consensus 121 ~p~t~Y~Yrv~~---------~s~~~~F~T~ 142 (454)
+|+|.|.+||.. +|+...|+||
T Consensus 73 ~p~t~Y~~rVrA~n~~G~ws~wS~~~~v~tP 103 (104)
T d3d48r2 73 HPGQKYLVQVRCKPDHGYWSAWSPATFIQIP 103 (104)
T ss_dssp -CCCEEEEEEEEEESSSCCCCCCCCEEEECC
T ss_pred CCCCEEEEEEEEEeCCCCCCCCcCCEEEECc
Confidence 999999999963 3566677776
|
| >d1j8ka_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.30 E-value=0.0037 Score=46.05 Aligned_cols=70 Identities=14% Similarity=0.314 Sum_probs=44.9
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEeC
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCG 131 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv~ 131 (454)
.|..+.+...+.+++.|.|.-+... ..-.++|.......... .. ..........|+||.|||.|.++|.
T Consensus 4 ~P~~l~v~~vt~~sv~l~W~~p~~~~~~y~i~~~~~~~~~~~~-------~~---~~~~~~~~~~i~~L~p~t~Y~~~V~ 73 (94)
T d1j8ka_ 4 RPKGLAFTDVDVDSIKIAWESPQGQVSRYRVTYSSPEDGIHEL-------FP---APDGEEDTAELQGLRPGSEYTVSVV 73 (94)
T ss_dssp CCCCCEEEEEETTEEEEECCCCSSCCSCEEEEEEETTTEEEEE-------CC---CCCSSCCEEEECSCCCCSEEEEEEE
T ss_pred CCCCCEEEEecCCEEEEEEeCCCccccceEEEEEeecCCCceE-------EE---ecCCCccEEEECCCCCCCEEEEEEE
Confidence 5667777777799999999765432 34466676554321110 00 1223345578899999999999996
Q ss_pred c
Q 012895 132 G 132 (454)
Q Consensus 132 ~ 132 (454)
.
T Consensus 74 a 74 (94)
T d1j8ka_ 74 A 74 (94)
T ss_dssp E
T ss_pred E
Confidence 3
|
| >d1v5ja_ b.1.2.1 (A:) KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1355 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.24 E-value=0.011 Score=44.82 Aligned_cols=70 Identities=14% Similarity=0.125 Sum_probs=42.9
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
..|..+.+.. ..+++.|.|.-.... ..-.|+|....... ...... .....+.+.|.+|.|++.|.
T Consensus 9 sPP~~~~~~~-t~~si~l~W~pp~~~~~~i~~Y~v~~~~~~~~~-~~~~~~---------~~~~~~~~~i~~L~p~t~Y~ 77 (108)
T d1v5ja_ 9 SPPRGLVAVR-TPRGVLLHWDPPELVPKRLDGYVLEGRQGSQGW-EVLDPA---------VAGTETELLVPGLIKDVLYE 77 (108)
T ss_dssp CCCEEEEEEE-CSSSEEEEEECCSCCSSCCCBEEEEEEETTCCC-EEEEEE---------ECSSCCEEECCCCCTTSCEE
T ss_pred CcCCCeEEEE-cCCEEEEEEEecccCCCceeEEEEEeeeeeeee-eecccc---------ccceeeeEEEEeccCCcEEE
Confidence 3456665543 467899999865422 12366777654322 211111 12234566789999999999
Q ss_pred EEeCc
Q 012895 128 YRCGG 132 (454)
Q Consensus 128 Yrv~~ 132 (454)
|||..
T Consensus 78 ~rV~A 82 (108)
T d1v5ja_ 78 FRLVA 82 (108)
T ss_dssp CCBEE
T ss_pred EEEEE
Confidence 99964
|
| >d2crza1 b.1.2.1 (A:8-104) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.23 E-value=0.0054 Score=45.71 Aligned_cols=68 Identities=16% Similarity=0.184 Sum_probs=42.8
Q ss_pred CCcEEEEEEeCCCC-----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEeCc------
Q 012895 64 KDYIRVSWITDDKE-----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCGG------ 132 (454)
Q Consensus 64 ~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv~~------ 132 (454)
.+++.|+|..+... ..-.|+|.......+..+.. .. ...++|.+|+|++.|.|||..
T Consensus 16 ~~sv~l~W~~P~~~gg~~i~~Y~v~~~~~~~~~~~~~~~----------~~--~~~~~v~~L~p~t~Y~frV~A~N~~G~ 83 (97)
T d2crza1 16 AKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVYQ----------GS--EVECTVSSLLPGKTYSFRLRAANKMGF 83 (97)
T ss_dssp SSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCEEEEE----------ES--CSEEEEESCCTTCEEEECCEEECSSCB
T ss_pred CCEEEEEEeCCCcCCCCceeEEEEEEEcCcCCceeEeec----------CC--ceEEEEcCCCCCEEEEEEEEEecCCeE
Confidence 67899999865321 23466676554433322211 11 223578999999999999963
Q ss_pred --cCceeEEECCC
Q 012895 133 --RGPEFSFKMPP 143 (454)
Q Consensus 133 --~s~~~~F~T~p 143 (454)
.++...++|.|
T Consensus 84 s~~S~~~~~~T~p 96 (97)
T d2crza1 84 GPFSEKCDITTAP 96 (97)
T ss_dssp CCCCCCEEEECCC
T ss_pred cCCcCCCeEEeCc
Confidence 35667788876
|
| >d2fnba_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.22 E-value=0.0052 Score=45.36 Aligned_cols=70 Identities=9% Similarity=0.034 Sum_probs=43.8
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCC--CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEe
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKE--AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRC 130 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv 130 (454)
.|..+.+.-...+++.|.|.-.... ..-.|+|............ . ...-.....|+||+||+.|.++|
T Consensus 8 ~P~~l~v~~~t~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~~-~---------~~~~~t~~~i~~L~p~t~Y~~~V 77 (95)
T d2fnba_ 8 QLTDLSFVDITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFED-F---------VDSSVGYYTVTGLEPGIDYDISV 77 (95)
T ss_dssp CCTTCEEECCCSSCEEEECCCCCCSSCCEEEEEEEEETSCCEEEEE-E---------CCSSCSEEEECCCCTTSEEEEEE
T ss_pred cCCCeEEEEEcCCEEEEEEEecCCceEEeEEEEEEEeeccceEEEE-E---------eCCCCeEEEEecccCCEEEEEEE
Confidence 3556667666789999999765422 2335666655432221111 0 12223456799999999999999
Q ss_pred Cc
Q 012895 131 GG 132 (454)
Q Consensus 131 ~~ 132 (454)
..
T Consensus 78 ~a 79 (95)
T d2fnba_ 78 IT 79 (95)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >d1wf5a1 b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.16 E-value=0.0053 Score=46.67 Aligned_cols=70 Identities=19% Similarity=0.322 Sum_probs=39.9
Q ss_pred CCeeEEEEec--CCCcEEEEEEeCCCCCc----cEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEE
Q 012895 53 DPQQVHISLA--AKDYIRVSWITDDKEAE----SVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 53 ~p~~v~l~~~--~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 126 (454)
+|..+.+... +.+++.|.|..+..... -.|+|........ ..... .......+.|+||+|++.|
T Consensus 13 ~P~~p~~~~~~~~~~sv~l~W~~P~~~~~~I~~Y~v~~~~~~~~~~-~~~~~---------~~~~~~~~~i~~L~p~t~Y 82 (108)
T d1wf5a1 13 APEHPVATLSTVERRAINLTWTKPFDGNSPLIRYILEMSENNAPWT-VLLAS---------VDPKATSVTVKGLVPARSY 82 (108)
T ss_dssp CCSSCEEEECSSSTTEEEEECCCCCCCSSCEEEEEEEEECTTCCCE-EEESS---------CCTTCCEEEEESCCTTCEE
T ss_pred CCCCCEEEEEeccCCEEEEEEECCCCCCCccEEEEEEEEeccCCce-EEeee---------ecCCccEEEECCCCCCCEE
Confidence 3433334443 37889999987643322 3455655443211 11111 1222334678999999999
Q ss_pred EEEeCc
Q 012895 127 YYRCGG 132 (454)
Q Consensus 127 ~Yrv~~ 132 (454)
.|||..
T Consensus 83 ~frV~A 88 (108)
T d1wf5a1 83 QFRLCA 88 (108)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999964
|
| >d1cfba1 b.1.2.1 (A:610-709) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neuroglian, two amino proximal Fn3 repeats species: Drosophila melanogaster [TaxId: 7227]
Probab=96.14 E-value=0.0086 Score=44.57 Aligned_cols=71 Identities=13% Similarity=0.187 Sum_probs=42.8
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
.+|..+.+... .+++.|+|.-.... ..-.|+|................ .. ...+.+.+|+|++.|.
T Consensus 7 ~~P~~~~v~~~-~~sv~lsW~pp~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~-------~~--~~~~~~~~L~p~t~Y~ 76 (100)
T d1cfba1 7 NAPKLTGITCQ-ADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKV-------PN--TDSSFVVQMSPWANYT 76 (100)
T ss_dssp CCCEEEEEEEC-SSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEEEEE-------ET--TCSEEEEECCSSEEEE
T ss_pred CcCcCcEEEEc-CCEEEEEEcCCcccccceEEEEEEEecCCCCceeeEEeeec-------CC--ceEEEEecCCCCCEEE
Confidence 46777887654 57899999865432 23466776554433222211110 11 1234577999999999
Q ss_pred EEeCc
Q 012895 128 YRCGG 132 (454)
Q Consensus 128 Yrv~~ 132 (454)
|||..
T Consensus 77 frV~A 81 (100)
T d1cfba1 77 FRVIA 81 (100)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99975
|
| >d1bpva_ b.1.2.1 (A:) Type I titin module {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Type I titin module species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.08 E-value=0.0039 Score=46.90 Aligned_cols=70 Identities=14% Similarity=0.156 Sum_probs=41.9
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCC-----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKE-----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
.|..+.+...+.+++.|+|..+... ..-.++|.......+..... ...-.....++||+|+|.|.
T Consensus 5 pP~~p~~~~~t~~sv~lsW~~P~~~~g~~i~~y~~~~~~~~~~~~~~~~~----------~~~~~~~~~i~~L~p~t~Y~ 74 (104)
T d1bpva_ 5 PPGKPVPLNITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANF----------SNILENEFTVSGLTEDAAYE 74 (104)
T ss_dssp CCCCCEEEEEETTEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCEECCC----------SCCCSSEEEECSCCSSCCEE
T ss_pred CCCCCEEEEecCCEEEEEEEeccccCcceEEEEEEEeecccccceeEEEe----------eccceeEEEEcCCCCCCEEE
Confidence 3444555555688999999865322 22456666554332221110 11123345789999999999
Q ss_pred EEeCc
Q 012895 128 YRCGG 132 (454)
Q Consensus 128 Yrv~~ 132 (454)
|||..
T Consensus 75 frV~A 79 (104)
T d1bpva_ 75 FRVIA 79 (104)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99974
|
| >d1bqua2 b.1.2.1 (A:100-214) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor gp130 cytokine-binding domains species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.94 E-value=0.0086 Score=45.75 Aligned_cols=83 Identities=13% Similarity=0.195 Sum_probs=49.4
Q ss_pred CCeeEEEEecC--CCcEEEEEEeCCCCC----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEE
Q 012895 53 DPQQVHISLAA--KDYIRVSWITDDKEA----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 53 ~p~~v~l~~~~--~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 126 (454)
.|..+.+...+ .+++.|.|.-..... .-.|+|....+......... ...+-...+.|++|.|++.|
T Consensus 7 pP~~~~v~~~~~~~~si~v~W~~p~~~~~~~~~Y~v~y~~~~~~~~~~~~~~--------~~~~~~~~~~i~~L~~~t~Y 78 (115)
T d1bqua2 7 PPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE--------DTASTRSSFTVQDLKPFTEY 78 (115)
T ss_dssp CCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCGG--------GGCSCCSEEEECSCCSSEEE
T ss_pred CCCCCEEEEeccCCCEEEEEEeeccccccceeeeeeeeeeeeeeeeeccccc--------cccccccEEeeCCCccCcEE
Confidence 56677777544 788999998643221 24566665544332211100 11223456789999999999
Q ss_pred EEEeCc-----------cCceeEEECCC
Q 012895 127 YYRCGG-----------RGPEFSFKMPP 143 (454)
Q Consensus 127 ~Yrv~~-----------~s~~~~F~T~p 143 (454)
.+||.. ++....++|+.
T Consensus 79 ~~~V~a~~~~G~g~~S~~S~~~~~~T~~ 106 (115)
T d1bqua2 79 VFRIRCMKEDGKGYWSDWSEEASGITYE 106 (115)
T ss_dssp EEEEEEEETTSCSCCCCCCCCEEEEECC
T ss_pred EEEEEEEeCCCccCCcCCcCCEEEECCC
Confidence 999952 23456677754
|
| >d1x3da1 b.1.2.1 (A:8-112) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.92 E-value=0.012 Score=44.32 Aligned_cols=80 Identities=15% Similarity=0.214 Sum_probs=47.5
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCCCccEEE----EeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKEAESVVE----YGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~~~~~v~----y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
..|..+.+.....+++.|+|.-.......... |.............. . ......+.+|+|++.|.
T Consensus 12 ~~P~~~~~~~~~~~sv~l~W~pp~~~~~~i~~Y~i~~~~~~~~~~~~~~~~---------~--~~~~~~~~~L~p~t~Y~ 80 (105)
T d1x3da1 12 DIPNPPRIANRTKNSLTLQWKAPSDNGSKIQNFVLEWDEGKGNGEFCQCYM---------G--SQKQFKITKLSPAMGCK 80 (105)
T ss_dssp CCCCCCEEEEEETTEEEEECCCCCCCSSCEEEEEEEECTTTSSSCCEEEEE---------E--SCSEEEEESCCTTCEEE
T ss_pred cCCCCCEEEEccCCEEEEEEECCCCCcCccEEEEEEEecCCCcceeEEEec---------C--CccEEEecCCcCCcEEE
Confidence 35667777777789999999876543333333 332222211111111 1 12245678999999999
Q ss_pred EEeCc--------cCceeEEECC
Q 012895 128 YRCGG--------RGPEFSFKMP 142 (454)
Q Consensus 128 Yrv~~--------~s~~~~F~T~ 142 (454)
+||.. .|+...|+|.
T Consensus 81 frV~A~N~~G~s~~S~~~~~~T~ 103 (105)
T d1x3da1 81 FRLSARNDYGTSGFSEEVLYYTS 103 (105)
T ss_dssp EECCEEESSCBCCCCCCEEEECS
T ss_pred EEEEEECCCeEcCCCCcEEEECC
Confidence 99974 2455666664
|
| >d1cfba2 b.1.2.1 (A:710-814) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neuroglian, two amino proximal Fn3 repeats species: Drosophila melanogaster [TaxId: 7227]
Probab=95.82 E-value=0.015 Score=43.71 Aligned_cols=73 Identities=10% Similarity=0.053 Sum_probs=45.6
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCC---C---CCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCC
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDD---K---EAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPAT 124 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~---~---~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 124 (454)
...|..|.+.....+++.|+|.-.. . ...-.|.|............ . ..........|.+|+|++
T Consensus 5 ~~~P~~v~~~~~~~~si~v~W~p~~~~~~ng~i~~Y~I~y~~~~~~~~~~~~-~--------~~~~~~~~~~i~~L~p~t 75 (105)
T d1cfba2 5 FKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENN-N--------IFDWRQNNIVIADQPTFV 75 (105)
T ss_dssp SCCCSCCEEECSSTTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCCEEE-E--------ECCTTCCEEEECSCCSSC
T ss_pred CCCCcCeEEEEccCCeEEEEEeCCChhhcCceEEEEEEEeeeeccccceeEE-E--------ecCCCccEEEECCCCCCC
Confidence 3467778888777899999996421 1 12335667655432221111 0 012334467899999999
Q ss_pred EEEEEeCc
Q 012895 125 TYYYRCGG 132 (454)
Q Consensus 125 ~Y~Yrv~~ 132 (454)
.|.+||..
T Consensus 76 ~Y~~~V~A 83 (105)
T d1cfba2 76 KYLIKVVA 83 (105)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999974
|
| >d1uema_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1568 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.70 E-value=0.0097 Score=45.81 Aligned_cols=70 Identities=13% Similarity=0.197 Sum_probs=41.8
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCCC----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKEA----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
.|..+.+.....+++.|.|.-..... .-.|+|.............. ... ....+|++|+|++.|.+
T Consensus 18 pP~~~~v~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~--------~~~--~~~~~v~~L~p~t~Y~f 87 (117)
T d1uema_ 18 PPSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVAN--------HVK--TTLYTVRGLRPNTIYLF 87 (117)
T ss_dssp CCCCCEEEEECSSCEEEECCCCBCSSSCCCEEEEEEEETTTEEEEEEEEE--------EEC--SSEEEECSCCTTCEEEE
T ss_pred CCCCCEEEEccCCEEEEEEECCCcCCCCeEEEEEEEeccCCceeeEEecc--------ccc--cccceECCCCCCCEEEE
Confidence 56677777777889999996443221 23555654433211111100 011 12457899999999999
Q ss_pred EeCc
Q 012895 129 RCGG 132 (454)
Q Consensus 129 rv~~ 132 (454)
||..
T Consensus 88 rV~A 91 (117)
T d1uema_ 88 MVRA 91 (117)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9964
|
| >d1wfua_ b.1.2.1 (A:) Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.65 E-value=0.003 Score=49.13 Aligned_cols=31 Identities=26% Similarity=0.301 Sum_probs=23.9
Q ss_pred EEEECCCCCCCEEEEEeCc--------cCceeEEECCCC
Q 012895 114 HVKIGPLEPATTYYYRCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 114 ~~~l~gL~p~t~Y~Yrv~~--------~s~~~~F~T~p~ 144 (454)
..+|++|+|++.|.+||.. .++...|+|++.
T Consensus 76 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 114 (120)
T d1wfua_ 76 RHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRE 114 (120)
T ss_dssp EEEEESCCTTCEEEEEEEEECSSSCEEECCCEEEECCCC
T ss_pred EEeCCCCCCCcEeeEEEEEEeCCcEeCCCCCEEEEeCCC
Confidence 3578999999999999964 256677888654
|
| >d2crma1 b.1.2.1 (A:8-114) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.57 E-value=0.016 Score=43.51 Aligned_cols=69 Identities=16% Similarity=0.182 Sum_probs=40.0
Q ss_pred CCCcEEEEEEeCCCC-----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEeCc-----
Q 012895 63 AKDYIRVSWITDDKE-----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCGG----- 132 (454)
Q Consensus 63 ~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv~~----- 132 (454)
..+++.|.|..+... ..-.|+|............. ..-.....|.||+||+.|.+||..
T Consensus 24 ~~~sv~l~W~~P~~~~g~~~~~y~v~~~~~~~~~~~~~~~-----------~~~~~~~~i~~L~p~t~Y~~rV~A~n~~G 92 (107)
T d2crma1 24 HSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMIY-----------SGATREHLCDRLNPGCFYRLRVYCISDGG 92 (107)
T ss_dssp ETTEEEEECCCCTTCCSSCCCEEEEEEEESSSSCCCEEEE-----------CSSCSEEEECSCCTTSCEEEEEEEEETTE
T ss_pred cCCEEEEEEEECccCCcceEEEEEEEEEeecCCCcEEEee-----------cCCccEEEEeccCCCCEEEEEEEEECCCc
Confidence 478999999865322 12355555443322222111 111233578999999999999964
Q ss_pred ---cCceeEEECC
Q 012895 133 ---RGPEFSFKMP 142 (454)
Q Consensus 133 ---~s~~~~F~T~ 142 (454)
.|+...|+||
T Consensus 93 ~s~~S~~v~v~Tp 105 (107)
T d2crma1 93 QSAVSESLLVQTP 105 (107)
T ss_dssp ECCCCCCCCCCCC
T ss_pred CcCCCCcEEEECC
Confidence 2344556664
|
| >d1wisa1 b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.53 E-value=0.018 Score=43.42 Aligned_cols=75 Identities=13% Similarity=0.052 Sum_probs=44.8
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCCC----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKEA----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
.|..+.+.....+++.|.|.-..... .-.|+|.............. ... ..........|.||+|++.|.+
T Consensus 13 ~P~~~~~~~~~~~sv~l~W~pp~~~~~~i~~y~v~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~v~~L~p~t~Y~f 87 (111)
T d1wisa1 13 PPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLI-HQL----SNEPDARSMEVPDLNPFTCYSF 87 (111)
T ss_dssp CCEEEEEESCCSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEE-EEE----ESCTTCSEEEECSCCTTSEECC
T ss_pred CCCCCEEEEcCCCEEEEEEeCCCCCCCceeEEEEeeeecccCCCcceeee-eee----ecccceeEEEeCCCCCCCEEEE
Confidence 67788887777899999998654322 23556654433222110000 000 0222334567899999999999
Q ss_pred EeCc
Q 012895 129 RCGG 132 (454)
Q Consensus 129 rv~~ 132 (454)
||..
T Consensus 88 rV~A 91 (111)
T d1wisa1 88 RMRQ 91 (111)
T ss_dssp CCEE
T ss_pred EEEE
Confidence 9864
|
| >d1qg3a2 b.1.2.1 (A:1218-1320) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Integrin beta-4 subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.51 E-value=0.0045 Score=46.40 Aligned_cols=75 Identities=16% Similarity=0.296 Sum_probs=44.7
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCCC----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKEA----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
.|..+.+.....+++.|.|.-..... .-.|+|.......... +...... ....-...++|.||+|++.|.+
T Consensus 5 ~P~~~~~~~~~~~sv~v~W~~P~~~~g~i~~Y~i~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~i~~L~p~t~Y~~ 79 (103)
T d1qg3a2 5 EPGRLAFNVVSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPI--GPMKKVL---VDNPKNRMLLIENLRESQPYRY 79 (103)
T ss_dssp CCCCCEEEEEETTEEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBC--SCCEEEE---ECCTTCCEEEECCCCTTCCEEE
T ss_pred cCCCcEEEEecCCEEEEEEEECccCCCCceEEEEEeeccccccccc--cceEEEE---ecCCCceEEEEeecCCCCEEEE
Confidence 56777777777999999998664322 2345665544321110 0000000 0112234678999999999999
Q ss_pred EeCc
Q 012895 129 RCGG 132 (454)
Q Consensus 129 rv~~ 132 (454)
||..
T Consensus 80 ~V~A 83 (103)
T d1qg3a2 80 TVKA 83 (103)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9964
|
| >d1wk0a_ b.1.2.1 (A:) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.51 E-value=0.012 Score=46.65 Aligned_cols=31 Identities=16% Similarity=0.267 Sum_probs=24.6
Q ss_pred EEEEECCCCCCCEEEEEeCc--------cCceeEEECCC
Q 012895 113 HHVKIGPLEPATTYYYRCGG--------RGPEFSFKMPP 143 (454)
Q Consensus 113 ~~~~l~gL~p~t~Y~Yrv~~--------~s~~~~F~T~p 143 (454)
..++|++|+|+|.|.+||.. .++...|+|++
T Consensus 82 ~~~~i~~L~P~t~Y~f~V~A~n~~G~g~~S~~~~~~T~~ 120 (137)
T d1wk0a_ 82 TNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLS 120 (137)
T ss_dssp SEEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCC
T ss_pred cEEEECCCCCCcEEEEEEEEEcCCcccCCCCCEEEECCC
Confidence 35689999999999999963 35667799964
|
| >d1ueya_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.44 E-value=0.024 Score=44.00 Aligned_cols=71 Identities=14% Similarity=0.249 Sum_probs=43.4
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCCCc----cEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKEAE----SVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
..|..+++...+.+++.|.|.-...... ..++|.............. .....+...|.+|+|++.|.
T Consensus 18 ~~P~~~~v~~~~~~sv~l~W~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~i~~L~p~t~Y~ 88 (127)
T d1ueya_ 18 NPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQT---------EVSGTQTTAQLNLSPYVNYS 88 (127)
T ss_dssp CCCEEEEEECCSSSCEEEEEECCCCCSSCEEEEEEEEEBTTTCTTCEEEEE---------EEESSCCEEEECCCTTCEEC
T ss_pred cCCCCcEEEEecCCeEEEEEeCCcccccceEeeeeeeccccccceeEEEEe---------ecCCceEEEECCCccCCEEE
Confidence 3688888888889999999986643322 2344443332222211111 01122335678999999999
Q ss_pred EEeC
Q 012895 128 YRCG 131 (454)
Q Consensus 128 Yrv~ 131 (454)
+||.
T Consensus 89 frV~ 92 (127)
T d1ueya_ 89 FRVM 92 (127)
T ss_dssp CEEE
T ss_pred EEEE
Confidence 9996
|
| >d1ujta_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1568 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.40 E-value=0.019 Score=44.40 Aligned_cols=71 Identities=14% Similarity=0.146 Sum_probs=44.2
Q ss_pred CCcEEEEEEeCCCCC---ccEEEEeecCCCC----ceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEeCc----
Q 012895 64 KDYIRVSWITDDKEA---ESVVEYGKLPGRY----NTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCGG---- 132 (454)
Q Consensus 64 ~~~~~v~W~t~~~~~---~~~v~y~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv~~---- 132 (454)
.+++.|+|.-..... .-.|.|....... +.... ....-....+|.||+|+|.|.+||..
T Consensus 29 ~tsi~v~W~~p~~~~~i~gY~v~y~~~~~~~~~~~~~~~~----------v~~~~~~s~~i~~L~p~t~Y~f~V~A~n~~ 98 (120)
T d1ujta_ 29 PTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQATSSWQNLD----------AKVPTERSAVLVNLKKGVTYEIKVRPYFNE 98 (120)
T ss_dssp TTEEEEEEEESSCCSSCCEEEEEEEESSSSSTTTCCEEEE----------CCCTTCCEEEEESCCSSEEEEEEEEEESSS
T ss_pred CCeEEEEecCCCCCCcEEEEEEEeeecccCCCCcceEEEE----------eccCceeEEEECCCCCCCEEEEEEEEEeCC
Confidence 789999998764322 2457776543221 11111 01223445678999999999999853
Q ss_pred ----cCceeEEECCCC
Q 012895 133 ----RGPEFSFKMPPA 144 (454)
Q Consensus 133 ----~s~~~~F~T~p~ 144 (454)
.|....++|+++
T Consensus 99 G~G~~S~~~~~~T~e~ 114 (120)
T d1ujta_ 99 FQGMDSESKTVRTTEE 114 (120)
T ss_dssp CCCCCCCCEEEEECSS
T ss_pred cCcCCCCCEEEEeCCC
Confidence 356677888764
|
| >d1fnaa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.38 E-value=0.02 Score=41.67 Aligned_cols=65 Identities=17% Similarity=0.235 Sum_probs=41.1
Q ss_pred EEEecCCCcEEEEEEeCCCC-CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEeCc
Q 012895 58 HISLAAKDYIRVSWITDDKE-AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCGG 132 (454)
Q Consensus 58 ~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv~~ 132 (454)
++.....+++.|.|..+..+ ..-.|+|....+....... . .++-...+.|+||+||+.|.++|..
T Consensus 4 ~v~~~t~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~~------~----~~~~~t~~~l~~L~p~t~Y~~~V~a 69 (91)
T d1fnaa_ 4 EVVAATPTSLLISWDAPAVTVRYYRITYGETGGNSPVQEF------T----VPGSKSTATISGLKPGVDYTITVYA 69 (91)
T ss_dssp EEEEECSSCEEEECCCCSSCCSEEEEEEEETTCCSCCEEE------E----EETTCCEEEECSCCTTCEEEEEEEE
T ss_pred EEEEeCCCEEEEEEEccceEecEEEEEEEcCCCCceeEEE------E----eCCCccEEEeCCCCCCCEEEEEEEE
Confidence 45555688999999866433 3457777765443222110 0 1112335789999999999999864
|
| >d1wfoa1 b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.36 E-value=0.019 Score=44.00 Aligned_cols=72 Identities=13% Similarity=0.170 Sum_probs=44.3
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
..|..+.+.....+++.|.|.-+... ..-.|+|.............. ...-.....|++|+|+|.|.
T Consensus 22 ~~P~~~~~~~~~~~sv~v~W~~P~~~~g~i~~Y~i~y~~~~~~~~~~~~~~---------~~~~~~~~~i~~L~p~t~Y~ 92 (117)
T d1wfoa1 22 GPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVEV---------LAPSARQYTATGLKPESVYL 92 (117)
T ss_dssp CCCCCCEEEEECSSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSCCCEEE---------ECTTCCEEEEESCCSSSEEE
T ss_pred cCCCCcEEEEecCCEEEEEEECCCCCCCceEEEeeeeeeccCCCceEeEEe---------cCCceEEEEECCCCCCCEEE
Confidence 46777777777799999999765432 223566765543222111100 11122345689999999999
Q ss_pred EEeCc
Q 012895 128 YRCGG 132 (454)
Q Consensus 128 Yrv~~ 132 (454)
+||..
T Consensus 93 ~~V~A 97 (117)
T d1wfoa1 93 FRITA 97 (117)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99964
|
| >d1n26a3 b.1.2.1 (A:196-299) Interleukin-6 receptor alpha chain, domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-6 receptor alpha chain, domains 2 and 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.29 E-value=0.04 Score=40.98 Aligned_cols=70 Identities=13% Similarity=0.161 Sum_probs=44.4
Q ss_pred CCCeeEEEEecC--CCcEEEEEEeCCC--CC----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCC
Q 012895 52 SDPQQVHISLAA--KDYIRVSWITDDK--EA----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPA 123 (454)
Q Consensus 52 ~~p~~v~l~~~~--~~~~~v~W~t~~~--~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~ 123 (454)
..|..+.|...+ .+.+.|+|..+.. .. .-.|+|.......+.... ..+......|.+|+|+
T Consensus 3 ~pP~~l~v~~~~~~~~~l~v~W~~P~~~~~~~~~~~y~v~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p~ 71 (104)
T d1n26a3 3 DPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWM-----------VKDLQHHCVIHDAWSG 71 (104)
T ss_dssp CCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCCEEEE-----------CGGGCSEEEESSCCTT
T ss_pred cCCCCCEEEEEecCCCEEEEEEEeeeecCCCceeEEEEEEEeeCCCCceeeec-----------cccceEEEEECCCCCC
Confidence 357777787654 6789999997531 11 245667655443322221 1122345678999999
Q ss_pred CEEEEEeCc
Q 012895 124 TTYYYRCGG 132 (454)
Q Consensus 124 t~Y~Yrv~~ 132 (454)
+.|.+||..
T Consensus 72 t~Y~~rVra 80 (104)
T d1n26a3 72 LRHVVQLRA 80 (104)
T ss_dssp CCEEEEEEE
T ss_pred CEEEEEEEE
Confidence 999999963
|
| >d2dn7a1 b.1.2.1 (A:8-101) Receptor-type tyrosine-protein phosphatase F, PTPRF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Receptor-type tyrosine-protein phosphatase F, PTPRF species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.00 E-value=0.079 Score=38.37 Aligned_cols=65 Identities=17% Similarity=0.217 Sum_probs=40.3
Q ss_pred EEEEecCCCcEEEEEEeCCCCC----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEeCc
Q 012895 57 VHISLAAKDYIRVSWITDDKEA----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCGG 132 (454)
Q Consensus 57 v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv~~ 132 (454)
+.+.....+++.|.|.-+.... .-.|+|............- ..-.....|++|+|++.|.+||..
T Consensus 6 ~~~~~~~~~sv~l~W~pP~~~~g~i~~Y~i~~~~~~~~~~~~~~~-----------~~~~~~~~i~~L~p~t~Y~~~V~A 74 (94)
T d2dn7a1 6 MMISTTAMNTALLQWHPPKELPGELLGYRLQYCRADEARPNTIDF-----------GKDDQHFTVTGLHKGTTYIFRLAA 74 (94)
T ss_dssp EEEEECSTTEEEEEEECCSSCSSCCCEEEEEEEETTCSSCEEEEE-----------ETTCCEEEEECCCTTCEEEEEEEE
T ss_pred EeEEEEeCCEEEEEEeCCCCCCCceEEEEEEEEEcCCCCcEEEEc-----------CCCccEEEEEccCCeeEEEEEEEE
Confidence 3355555889999999764322 2456676655433222211 112234568999999999999974
|
| >d1wfna1 b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.92 E-value=0.024 Score=42.48 Aligned_cols=70 Identities=14% Similarity=0.216 Sum_probs=42.9
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCC----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKE----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
.|..+.+...+.+++.|.|...... ..-.|+|............ ...+-.....|+||+|++.|.+
T Consensus 13 ~p~~l~~~~~~~~sv~l~W~~P~~~ng~i~~Y~i~~~~~~~~~~~~~~----------~~~~~~~~~~i~~L~p~t~Y~~ 82 (106)
T d1wfna1 13 PVGHLSFSEILDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNTRVTH----------YLPNVTLEYRVTGLTALTTYTI 82 (106)
T ss_dssp CCSCCEEESCCSSEEEEECCCCTTCCSCCCEEEEEEEESSCGGGCCCE----------EECSSCCEEEEESCCTTCEEEE
T ss_pred CCCCcEEEEecCCEEEEEEECCCCCCCcEEeEEEEEEECCCCcceEEE----------ecCCCeeEEEEccCCCCCEEEE
Confidence 5666777766788999999865432 1234566554332111000 0122234567899999999999
Q ss_pred EeCc
Q 012895 129 RCGG 132 (454)
Q Consensus 129 rv~~ 132 (454)
||..
T Consensus 83 ~V~A 86 (106)
T d1wfna1 83 EVAA 86 (106)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9964
|
| >d1x5ia1 b.1.2.1 (A:8-120) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.91 E-value=0.027 Score=42.79 Aligned_cols=79 Identities=20% Similarity=0.235 Sum_probs=48.2
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCCC----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKEA----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
..|..+++..+ .+++.|.|.-..... .-.|+|+..... ..... ...-....+|.+|+|++.|.
T Consensus 22 ~~P~~~~~~~~-~~si~v~W~~p~~~~g~i~~Y~i~~~~~~~~-~~~~~-----------~~~~~~~~~i~~L~p~t~Y~ 88 (113)
T d1x5ia1 22 EVPSSLHVRPL-VTSIVVSWTPPENQNIVVRGYAIGYGIGSPH-AQTIK-----------VDYKQRYYTIENLDPSSHYV 88 (113)
T ss_dssp CSCSEEEEEEE-TTEEEEEEECCSCTTBCCCEEEEEECSSCGG-GEEEE-----------CCTTCCEEEECSCCSSCEEC
T ss_pred CCCEeeeeeeC-CCEEEEEEEccccCCccEEEEEEEeeecccc-ceeee-----------eeCCccEEEEeccccCcEEE
Confidence 46777877654 578999999654322 235666554322 11111 12233456799999999999
Q ss_pred EEeCcc-----C--ceeEEECCC
Q 012895 128 YRCGGR-----G--PEFSFKMPP 143 (454)
Q Consensus 128 Yrv~~~-----s--~~~~F~T~p 143 (454)
+||... + ..-.++|.|
T Consensus 89 ~~V~A~n~~G~g~~~~~~~~T~P 111 (113)
T d1x5ia1 89 ITLKAFNNVGEGIPLYESAVTRP 111 (113)
T ss_dssp CEEEEECSSCBCCCCCCCEECCC
T ss_pred EEEEEECCCcCCCCeeeEEEeCC
Confidence 999641 2 234577766
|
| >d1cd9b1 b.1.2.1 (B:1-107) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.91 E-value=0.074 Score=39.62 Aligned_cols=80 Identities=5% Similarity=-0.024 Sum_probs=46.3
Q ss_pred CCCeeEE-EEecCCCcEEEEEEeCCCCC---ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 52 SDPQQVH-ISLAAKDYIRVSWITDDKEA---ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 52 ~~p~~v~-l~~~~~~~~~v~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
..|+.+. ++....++|+++|.-..... ...+.|.................. .........+.+++|+|++.|.
T Consensus 6 ~~P~~v~~i~~~~~~sv~~sW~p~~d~~~~~~y~~~y~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~L~~~t~Y~ 82 (107)
T d1cd9b1 6 ASPSNLSCLMHLTTNSLVCQWEPGPETHLPTSFILKSFRSRADCQYQGDTIPDCV---AKKRQNNCSIPRKNLLLYQYMA 82 (107)
T ss_dssp CCCEEEEEEEETTTTEEEEEEECCSCCSSCCEEEEEEEECCGGGCSCCCEEEEEE---CCTTCCEEEEEGGGCCTTSCEE
T ss_pred CCCcCCEEEEecCCCEEEEEEcCCCCCCCCcceeEEEEEeecccceeeeeeeeec---cccCccccEEEcCCCCcCceEE
Confidence 4677776 45555889999998653322 234555544322111110000000 0123456678899999999999
Q ss_pred EEeCccC
Q 012895 128 YRCGGRG 134 (454)
Q Consensus 128 Yrv~~~s 134 (454)
+||....
T Consensus 83 frV~A~N 89 (107)
T d1cd9b1 83 IWVQAEN 89 (107)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 9997543
|
| >d1uc6a_ b.1.2.1 (A:) Ciliary neurotrophic factor receptor alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ciliary neurotrophic factor receptor alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.55 E-value=0.052 Score=40.62 Aligned_cols=68 Identities=13% Similarity=0.088 Sum_probs=41.9
Q ss_pred CCeeEEEEecC--CCcEEEEEEeCCCCC-------ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCC
Q 012895 53 DPQQVHISLAA--KDYIRVSWITDDKEA-------ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPA 123 (454)
Q Consensus 53 ~p~~v~l~~~~--~~~~~v~W~t~~~~~-------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~ 123 (454)
.|..+.+.... .+++.|.|..+.... .-.++|............. .-.....|.+|+|+
T Consensus 10 PP~~l~v~~~~~~~~~l~l~W~~P~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~------------~~~~~~~i~~L~~~ 77 (109)
T d1uc6a_ 10 PPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVEL------------SNGTAHTITDAYAG 77 (109)
T ss_dssp CCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCCEEE------------SSCSEEEETTCCSS
T ss_pred CCCCCEEEEEecCCCEEEEEEeCCcccCCCCeeEEEEEEEEeecCCCceEEecc------------CCceeEEeCCCCCC
Confidence 56777777544 678999999864211 2345555444332222111 11234678999999
Q ss_pred CEEEEEeCc
Q 012895 124 TTYYYRCGG 132 (454)
Q Consensus 124 t~Y~Yrv~~ 132 (454)
|.|.+||..
T Consensus 78 t~Y~~rVrA 86 (109)
T d1uc6a_ 78 KEYIIQVAA 86 (109)
T ss_dssp SCEEEEEEC
T ss_pred CEEEEEEEE
Confidence 999999964
|
| >d1axib2 b.1.2.1 (B:131-236) Growth hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Growth hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.54 E-value=0.038 Score=41.49 Aligned_cols=67 Identities=16% Similarity=0.195 Sum_probs=39.7
Q ss_pred CCeeEEEEecC------CCcEEEEEEeCCCC----C----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEEC
Q 012895 53 DPQQVHISLAA------KDYIRVSWITDDKE----A----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIG 118 (454)
Q Consensus 53 ~p~~v~l~~~~------~~~~~v~W~t~~~~----~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 118 (454)
.|..+.++... ..++.|+|.-+... . .-.|+|....+..+..... .....+.|+
T Consensus 3 PP~~l~~t~~~~s~~~~~~~v~vsW~pP~~~~~~~~~~~l~Y~v~y~~~~~~~w~~~~~------------~~~~~~~i~ 70 (106)
T d1axib2 3 PPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETKWKMMDP------------ILTTSVPVY 70 (106)
T ss_dssp CCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTCSSCEECCC------------BSSSEEEEE
T ss_pred CCCCceeeEeeeccccccCeEEEEEcCCCccCCCCCeeEEEEEEeeeecCCccceeeee------------cccceEEEC
Confidence 35555555332 34689999976321 1 2356666655443322211 112356789
Q ss_pred CCCCCCEEEEEeC
Q 012895 119 PLEPATTYYYRCG 131 (454)
Q Consensus 119 gL~p~t~Y~Yrv~ 131 (454)
+|+|++.|.+||.
T Consensus 71 ~L~~~t~Y~frVR 83 (106)
T d1axib2 71 SLKVDKEYEVRVR 83 (106)
T ss_dssp EEETTSCEEEEEE
T ss_pred CCCCCCEEEEEEE
Confidence 9999999999995
|
| >d1wfta_ b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Host cell factor 2, HCF-2 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.26 E-value=0.12 Score=39.67 Aligned_cols=88 Identities=16% Similarity=0.076 Sum_probs=49.9
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC----CccEEEEeecCCCCce-----EE----EeEeEEEeeeeeecCeEEEEEEC
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE----AESVVEYGKLPGRYNT-----VA----TGEHTSYQFFFYKSGKIHHVKIG 118 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~-----~~----~~~~~~~~~~~~~~~~~~~~~l~ 118 (454)
.+|..|.+.. ..+++.|+|.-+... ..-.|+|......... .. .+..+... ..+-.....|.
T Consensus 9 ~aP~~v~v~~-~~~si~l~W~~P~~~~g~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~i~ 83 (123)
T d1wfta_ 9 GAPSTVRISK-NVDGIHLSWEPPTSPSGNILEYSAYLAIRTAQMQDNPSQLVFMRIYCGLKTSCT----VTAGQLANAHI 83 (123)
T ss_dssp CCCEEEEEEE-CSSEEEEEEECCSSCCSSCCCEEEEEEECSSCCCSCSCCCEEEEEEEESCSEEE----EEHHHHTTCCC
T ss_pred cCCcccEEEe-CCCEEEEEecCchhcCCceEEEEEEEEECCCCCccccceeeeEEEecCCceeEe----ecCCccEEEEc
Confidence 4678888765 478899999965432 2346777665432111 00 00000111 01111223678
Q ss_pred CCCCCCEEEEEeCc--------cCceeEEECCCC
Q 012895 119 PLEPATTYYYRCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 119 gL~p~t~Y~Yrv~~--------~s~~~~F~T~p~ 144 (454)
+|+|++.|.+||.. .++...|+|...
T Consensus 84 ~L~p~t~Y~frV~A~N~~G~Gp~S~~~~~~t~~~ 117 (123)
T d1wfta_ 84 DYTSRPAIVFRISAKNEKGYGPATQIRWLQGNSK 117 (123)
T ss_dssp BCSSSCEEEEEEEEBSSSSBCCCEEEEEECCSCC
T ss_pred CCCCCCEEEEEEEEecCCcCCCCCCcEEEEecCC
Confidence 99999999999964 245567777553
|
| >d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.38 E-value=0.062 Score=48.19 Aligned_cols=68 Identities=18% Similarity=0.196 Sum_probs=40.3
Q ss_pred EEEEecCCCCCCh-HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhh-hhhhcCCCeeecCCCcccC
Q 012895 150 FAIVGDLGQTEWT-NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLV-EPYASSRPWMVTEGNHEIE 219 (454)
Q Consensus 150 f~~igD~~~~~~~-~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~-~~l~~~~P~~~v~GNHD~~ 219 (454)
+.++||+|....+ ..+++......-.-.|++||+++.+... .+.+.-++ -.+.-..-++.+.||||..
T Consensus 47 v~VvGDlHG~~~DL~~if~~~g~p~~~~ylFLGDYVDRG~~s--lEvl~lL~alKi~~P~~v~lLRGNHE~~ 116 (288)
T d3c5wc1 47 VTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYS--VETVTLLVALKVRYRERITILRGNHESR 116 (288)
T ss_dssp EEEECBCTTCHHHHHHHHHHHCCTTTSCEEECSCCCCSSSSH--HHHHHHHHHHHHHCTTTEEECCCTTSSH
T ss_pred eEEEeeCCCCHHHHHHHHHhcCCCccceEEecCcccCCCCcc--eeHHHHHHHHHhhCCCeEEEeccCCccc
Confidence 8899999976432 2333333232234589999999876653 22221111 1122224699999999974
|
| >d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-1 (PP-1) species: Human (Homo sapiens), beta isoform [TaxId: 9606]
Probab=93.36 E-value=0.068 Score=48.05 Aligned_cols=68 Identities=19% Similarity=0.268 Sum_probs=40.8
Q ss_pred EEEEecCCCCCCh-HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhh-hhhcCCCeeecCCCcccC
Q 012895 150 FAIVGDLGQTEWT-NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVE-PYASSRPWMVTEGNHEIE 219 (454)
Q Consensus 150 f~~igD~~~~~~~-~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~-~l~~~~P~~~v~GNHD~~ 219 (454)
+.++||+|....+ ..+++......-.-.|++||+++.+... .+.+.-++. .+.-..-++...||||..
T Consensus 54 v~VvGDiHG~~~DL~~if~~~g~p~~~~ylFLGDYVDRG~~s--lE~i~lL~aLKi~~P~~v~lLRGNHE~~ 123 (294)
T d1jk7a_ 54 LKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQS--LETICLLLAYKIKYPENFFLLRGNHECA 123 (294)
T ss_dssp EEEECBCTTCHHHHHHHHHHHCCTTSSCEEECSCCSSSSSCH--HHHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred eEEEEECCCChHhHHHHHhhcCCCccceEEeeccccCCCccc--hHHHHHHHHHHhhCCCeEEEecCCcccc
Confidence 7899999976432 2334333333344589999999876542 233221111 122225599999999985
|
| >d2dtge1 b.1.2.1 (E:808-909) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.42 E-value=0.0027 Score=47.90 Aligned_cols=81 Identities=11% Similarity=0.079 Sum_probs=44.3
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCCCccEEEEeec----CCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKEAESVVEYGKL----PGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~~~~~v~y~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
.|..|.+.....+++.|.|..+..+....+.|... ...... ..... ......+...|.+|+|++ |.+
T Consensus 7 ~P~~v~~~~~~~~sv~l~W~pP~~~ng~i~~Y~v~y~~~~~~~~~----~~~~~----~~~~~~~~~~~~~L~~~t-Y~~ 77 (102)
T d2dtge1 7 IVGPVTHEIFENNVVHLMWQEPKEPNGLIVLYEVSYRRYGDEELH----LCDTR----KHFALERGCRLRGLSPGN-YSV 77 (102)
T ss_dssp CCCCCCCCSSSSSCCCCCCCCCCSCSSCEEEECCCCBSSSBCCCC----CCCCS----SSCCCTTCCCCCSCCSSE-ECC
T ss_pred CCCCCEEEEECCCEEEEEEEeCCCCcceEEEeeeEEEecCCCCce----eeeee----ecccceEEEEEeccceee-EEE
Confidence 34444455555789999998765443345555432 111100 00000 122334557789999975 999
Q ss_pred EeCc--------cCceeEEECC
Q 012895 129 RCGG--------RGPEFSFKMP 142 (454)
Q Consensus 129 rv~~--------~s~~~~F~T~ 142 (454)
||.. .|+...|.|+
T Consensus 78 rV~A~n~~G~g~~S~~v~f~~~ 99 (102)
T d2dtge1 78 RIRATSLAGNGSWTEPTYFYVT 99 (102)
T ss_dssp CCCEEETTBCCCCCCCCEECCC
T ss_pred EEEEEcCCccCCCCCCEEEEcc
Confidence 9863 2455666664
|
| >d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-2B (PP-2B, calcineurin A subunit) species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.36 E-value=0.094 Score=49.94 Aligned_cols=68 Identities=18% Similarity=0.231 Sum_probs=39.2
Q ss_pred EEEEecCCCCCCh-HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhh-hhhhcCCCeeecCCCcccC
Q 012895 150 FAIVGDLGQTEWT-NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLV-EPYASSRPWMVTEGNHEIE 219 (454)
Q Consensus 150 f~~igD~~~~~~~-~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~-~~l~~~~P~~~v~GNHD~~ 219 (454)
+.++||+|....+ .++++......-.-.|++||+++.+...- +.+.-++ -.+.-..-++.+.||||..
T Consensus 72 v~VvGDIHGq~~DLl~If~~~G~P~~~~yLFLGDYVDRG~~Sl--EvlllL~aLKi~yP~~V~LLRGNHE~~ 141 (473)
T d1auia_ 72 VTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSI--ECVLYLWALKILYPKTLFLLRGNHECR 141 (473)
T ss_dssp EEEECCCTTCHHHHHHHHHHHCCTTTCCEEECSCCSSSSSCHH--HHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred EEEEEeCCCCHHHHHHHHHHcCCCCcceEEecCccccCCcccH--HHHHHHHHHHHhCCCeEEEeCCCCccH
Confidence 7899999976432 23333332222334789999998766522 2211111 1122224699999999963
|
| >d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Serine/threonine protein phosphatase 5, PP5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.30 E-value=0.1 Score=47.53 Aligned_cols=67 Identities=15% Similarity=0.196 Sum_probs=39.6
Q ss_pred EEEEEecCCCCCChHHHHHHhh--cCCC--CeEeecCccccCCCChhhHHHHhhhh-hhhhcCCCeeecCCCcccC
Q 012895 149 EFAIVGDLGQTEWTNSTLDHVG--SKDY--DVFLLPGDLSYADFQQPLWDSFGRLV-EPYASSRPWMVTEGNHEIE 219 (454)
Q Consensus 149 ~f~~igD~~~~~~~~~~l~~i~--~~~p--d~vl~~GDl~y~~~~~~~~~~~~~~~-~~l~~~~P~~~v~GNHD~~ 219 (454)
.+.++||+|.... .++.-++ ...+ .-.|++||+++.+.. ..+.+.-++ -.+.-..-++.+.||||..
T Consensus 61 pv~VvGDiHGq~~--DL~~if~~~g~p~~~~~ylFLGDYVDRG~~--slEvi~lL~~lKi~yP~~v~LLRGNHE~~ 132 (324)
T d1s95a_ 61 KITVCGDTHGQFY--DLLNIFELNGLPSETNPYIFNGDFVDRGSF--SVEVILTLFGFKLLYPDHFHLLRGNHETD 132 (324)
T ss_dssp EEEEECCCTTCHH--HHHHHHHHHCCCBTTBCEEEESCCSSSSTT--HHHHHHHHHHHHHHSTTTEEEECCTTSSH
T ss_pred CEEEEEECCCCHH--HHHHHHHHCCCCCCCCeEEEecccccCcCc--ceeehHHHHHHHHhCCCcEEeccCCcccc
Confidence 6889999997642 3333332 1222 348999999987654 223322111 1122224599999999984
|
| >d2gysa4 b.1.2.1 (A:317-416) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.16 E-value=0.072 Score=39.14 Aligned_cols=68 Identities=21% Similarity=0.340 Sum_probs=36.7
Q ss_pred CeeEEEEecCCCcEEEEEEeCCCCC-----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 54 PQQVHISLAAKDYIRVSWITDDKEA-----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 54 p~~v~l~~~~~~~~~v~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
|.-++|+.. .+++.|.|..+.... .-.|+|....+......... ..-...+.|.+|+|++.|.+
T Consensus 8 Pp~l~v~~~-~~s~~l~W~~P~~~~~~~~~~Y~v~y~~~~~~~~~~~~~~----------~~~~~~~~l~~L~p~t~Y~~ 76 (100)
T d2gysa4 8 PPSLQVTKD-GDSYSLRWETMKMRYEHIDHTFEIQYRKDTATWKDSKTET----------LQNAHSMALPALEPSTRYWA 76 (100)
T ss_dssp CCEEEEC----CCCEEEEEC--------CEEEEEEEECSSSCSTTSCEEE----------EESCSEEECCCCCSSCCCEE
T ss_pred CCccEEEEC-CCEEEEEEecCcccCCccceEEEEEEeecccceeceeecc----------cCCceEEEeCCCCCCCeEEE
Confidence 444555543 467999998875322 24677765543311111000 00123577899999999999
Q ss_pred EeCc
Q 012895 129 RCGG 132 (454)
Q Consensus 129 rv~~ 132 (454)
||..
T Consensus 77 rVRa 80 (100)
T d2gysa4 77 RVRV 80 (100)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9964
|
| >d1bqua1 b.1.2.1 (A:5-99) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor gp130 cytokine-binding domains species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.45 E-value=0.36 Score=34.75 Aligned_cols=73 Identities=4% Similarity=0.023 Sum_probs=43.8
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC---CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE---AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~---~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
..|.-+.+...+.++++++|.-.... ..-.|+|............ . ...-.....+.+|.|++.|++
T Consensus 5 ~~P~n~~~~~~~~~si~~~W~p~~~~~~~~~y~v~~~~~~~~~~~~~~------~----~~~~~~~~~~~~L~~~~~Y~f 74 (95)
T d1bqua1 5 EKPKNLSCIVNEGKKMRCEWDGGRETHLETNFTLKSEWATHKFADCKA------K----RDTPTSCTVDYSTVYFVNIEV 74 (95)
T ss_dssp CCCEEEEEEEETTSCCEEEEECCSCCSSCCEEEEEEEETTEECCCEEC------C----SSCTTEEECSSCCCTTSCEEE
T ss_pred CCCeeeEEEEccCCEEEEEEeCcccCCCceEEEEEEEEcccceeEeec------c----cccceeeeeeeecCCCcEEEE
Confidence 46777888877888999999876433 2335555544321111110 0 111112235679999999999
Q ss_pred EeCccC
Q 012895 129 RCGGRG 134 (454)
Q Consensus 129 rv~~~s 134 (454)
||....
T Consensus 75 ~V~A~N 80 (95)
T d1bqua1 75 WVEAEN 80 (95)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 997543
|
| >d2cspa1 b.1.2.1 (A:8-124) Rim binding protein 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Rim binding protein 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.00 E-value=0.099 Score=39.80 Aligned_cols=73 Identities=18% Similarity=0.214 Sum_probs=43.5
Q ss_pred CCCCeeEEEEecC-CCcEEEEEEeCCC------CCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCC
Q 012895 51 ESDPQQVHISLAA-KDYIRVSWITDDK------EAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPA 123 (454)
Q Consensus 51 ~~~p~~v~l~~~~-~~~~~v~W~t~~~------~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~ 123 (454)
...|..|.+.... .+++.|+|.-... .....+.|....+........ ....-...+.|++|+|+
T Consensus 11 p~pP~~v~v~~~~s~~si~vsW~PP~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~---------~~~~~~~~~~i~~L~~~ 81 (117)
T d2cspa1 11 PAPPQDVTVQAGVTPATIRVSWRPPVLTPTGLSNGANVTGYGVYAKGQRVAEVI---------FPTADSTAVELVRLRSL 81 (117)
T ss_dssp CCCCEEEEECCCSSTTEEEEEEECCCCCTTSCSSSSCEEEEEEESSSSEEEEEC---------CTTCSEEEEESHHHHHH
T ss_pred CCCCCccEEEEecCCCEEEEEEcCCCccccCcccccceEEEEEEeecccceeee---------eeccceeeeeccCCCCC
Confidence 3467777775544 6789999986421 123456676433221111100 12233456789999999
Q ss_pred CEEEEEeCc
Q 012895 124 TTYYYRCGG 132 (454)
Q Consensus 124 t~Y~Yrv~~ 132 (454)
+.|.+||..
T Consensus 82 t~Y~v~V~A 90 (117)
T d2cspa1 82 EAKGVTVRT 90 (117)
T ss_dssp TCSCBEEEE
T ss_pred cEEEEEEEE
Confidence 999999864
|
| >d1fyhb1 b.1.2.1 (B:12-109) Interferon-gamma receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interferon-gamma receptor alpha chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.60 E-value=0.73 Score=33.02 Aligned_cols=72 Identities=15% Similarity=0.073 Sum_probs=40.9
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCCCccE--EEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEe
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKEAESV--VEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRC 130 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~~~~~--v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv 130 (454)
+|..|.+...+. .+++.|.-+...+... ++|-......+....... ..........+.+|.+++.|++||
T Consensus 3 ~P~nv~v~s~n~-~~~L~W~pP~~~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~l~~~~~Y~fRV 74 (98)
T d1fyhb1 3 TPTNVTIESYNM-NPIVYWEYQIMPQVPVFTVEVKNYGVKNSEWIDACI-------NISHHYCNISDHVGDPSNSLWVRV 74 (98)
T ss_dssp CCEEEEEECBSS-CCEEEEECCCCSSCCEEEEEEEETTCSSSCCEEEEE-------EESSSEEECGGGCCSTTSCEEEEE
T ss_pred cCCceEEEEeCC-cEEEEECCCCCCCCCceeEEEEEeccccceeEEeee-------ecccceeeeEecccCCCCEEEEEE
Confidence 577777766654 4579999875443332 333333222211111110 123344556788999999999999
Q ss_pred Cc
Q 012895 131 GG 132 (454)
Q Consensus 131 ~~ 132 (454)
..
T Consensus 75 ~A 76 (98)
T d1fyhb1 75 KA 76 (98)
T ss_dssp EE
T ss_pred EE
Confidence 75
|
| >d3d85d3 b.1.2.1 (D:212-305) The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.52 E-value=0.45 Score=34.33 Aligned_cols=65 Identities=12% Similarity=0.061 Sum_probs=35.4
Q ss_pred CCeeEEEEecC-CCcEEEEEEeCCCCC--------ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCC
Q 012895 53 DPQQVHISLAA-KDYIRVSWITDDKEA--------ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPA 123 (454)
Q Consensus 53 ~p~~v~l~~~~-~~~~~v~W~t~~~~~--------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~ 123 (454)
.|+.|.|.... .+.+.|.|..+.... .-.|+|.............. . .+ +..|.|+
T Consensus 4 PP~nl~v~~~~~~~~l~v~W~~P~~~~~~~~~~~L~Yev~y~~~~~~~~~~~~~~----------~-~t----~~~L~p~ 68 (94)
T d3d85d3 4 PPKNLQLKPLKNSRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSKREKKDRVFT----------D-KT----SATVICR 68 (94)
T ss_dssp CCEEEEEEEC----CEEEEEECCTTSCSCTTTSCEEEEEEEECC------CEEEE----------S-SS----EEEECCC
T ss_pred CCcccEEEEecCCCeEEEEecCCCCcCCCCCeEEEEEEEEEEECCCCccEEeccc----------c-ce----EEEecCC
Confidence 57788887754 677999999885311 23566665443222211111 1 11 1247899
Q ss_pred CEEEEEeCc
Q 012895 124 TTYYYRCGG 132 (454)
Q Consensus 124 t~Y~Yrv~~ 132 (454)
+.|.+||..
T Consensus 69 ~~Y~v~VRa 77 (94)
T d3d85d3 69 KNASISVRA 77 (94)
T ss_dssp SSCEEEEEE
T ss_pred CCEEEEEEE
Confidence 999999974
|
| >d2dtge2 b.1.2.1 (E:593-807) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.20 E-value=0.34 Score=38.92 Aligned_cols=31 Identities=19% Similarity=0.137 Sum_probs=24.2
Q ss_pred EEEEECCCCCCCEEEEEeCc-----------cCceeEEECCC
Q 012895 113 HHVKIGPLEPATTYYYRCGG-----------RGPEFSFKMPP 143 (454)
Q Consensus 113 ~~~~l~gL~p~t~Y~Yrv~~-----------~s~~~~F~T~p 143 (454)
....|+||+|+|.|.++|.. .+....|||.|
T Consensus 155 ~~~~i~~L~p~t~Y~~~V~A~n~~~~~~~~s~s~~~~~rT~P 196 (196)
T d2dtge2 155 ESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTMP 196 (196)
T ss_dssp SEEEECSSCSSCEEEECCEEESCSSSSCCBCCCCCEEEECCC
T ss_pred EEEEECCCCCCCEEEEEEEEEECCCCCCCccCcceEEeeCCC
Confidence 35779999999999999852 23556788876
|
| >d1wj3a_ b.1.2.1 (A:) Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Contactin 3 (KIAA1496) species: Human (Homo sapiens) [TaxId: 9606]
Probab=83.91 E-value=0.79 Score=34.20 Aligned_cols=56 Identities=13% Similarity=0.067 Sum_probs=31.4
Q ss_pred CCCcEEEEEEeCCC--CC----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEeCc
Q 012895 63 AKDYIRVSWITDDK--EA----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCGG 132 (454)
Q Consensus 63 ~~~~~~v~W~t~~~--~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv~~ 132 (454)
+.+++.|.|..... .. .-.|+|............ . . . ...+.+|+|++.|.+||..
T Consensus 30 ~~~~i~v~W~~~~~~~~~g~i~~Y~v~y~~~~~~~~~~~~-~----------~-~--~~~~~~L~p~t~Y~~~V~A 91 (117)
T d1wj3a_ 30 TDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQVLN-T----------N-K--TSAELVLPIKEDYIIEVKA 91 (117)
T ss_dssp ETTEEEEECCCCCCCSSSCCEEEEEEEEEESSCSSCEEEE-E----------S-S--SEEEEECCCSSCEEEEEEE
T ss_pred cCCEEEEEEeecccccCCCceeEEEEEEEecCCCceeeee-c----------e-e--eEEEeeccCCcEEEEEEEE
Confidence 37889999986421 11 234555554432222111 1 1 1 1234589999999999964
|
| >d2dtge3 b.1.2.1 (E:468-592) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=82.60 E-value=0.38 Score=36.52 Aligned_cols=23 Identities=17% Similarity=0.024 Sum_probs=18.7
Q ss_pred CeEEEEEECCCCCCCEEEEEeCc
Q 012895 110 GKIHHVKIGPLEPATTYYYRCGG 132 (454)
Q Consensus 110 ~~~~~~~l~gL~p~t~Y~Yrv~~ 132 (454)
.......|+||+|+|.|.++|..
T Consensus 79 ~~~~~~~l~~L~p~T~Y~~~V~A 101 (125)
T d2dtge3 79 QNHPGWLMRGLKPWTQYAIFVKT 101 (125)
T ss_dssp SSCCEEEECSCCSSCBCCBEEEE
T ss_pred CccCEEEECCCccCCEEEEEEEE
Confidence 34456789999999999999863
|
| >d1y6kr1 b.1.2.1 (R:2-100) Interleukin-10 receptor 1, IL-10R1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-10 receptor 1, IL-10R1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=81.12 E-value=0.95 Score=32.79 Aligned_cols=72 Identities=10% Similarity=-0.068 Sum_probs=43.2
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCCC---ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEE
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKEA---ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYR 129 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yr 129 (454)
.|+.|+|...+. .+++.|.-+.... .-.|||.......+..+..-.. .........+.+|.++..|++|
T Consensus 6 ~P~nv~~~s~n~-~~~L~W~pp~~~g~~~~Y~Ve~~~~~~~~W~~v~~c~~-------~t~~~~~~~~~~l~~~~~Y~fR 77 (99)
T d1y6kr1 6 SPPSVWFEAEFF-HHILHWTPIPQQSESTCYEVALLRYGIESWNSISQCSQ-------TLSYDLTAVTLDLYHSNGYRAR 77 (99)
T ss_dssp CCSCEEEEEETT-EEEEEECCCTTCCTTCEEEEEEEETTSCCCEEEEEEES-------SSEEECGGGGTTGGGSSCEEEE
T ss_pred CCCcceEEEECC-EEEEEEcCCCCcCCCCEEEEEEEECCCcceEEEEeecc-------ccccceeeeeeecCCCCEEEEE
Confidence 477777766654 5789997554322 4578887665554554432110 0001111246789999999999
Q ss_pred eCc
Q 012895 130 CGG 132 (454)
Q Consensus 130 v~~ 132 (454)
|..
T Consensus 78 VrA 80 (99)
T d1y6kr1 78 VRA 80 (99)
T ss_dssp EEE
T ss_pred EEE
Confidence 974
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