Citrus Sinensis ID: 012901

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450----
MAEDTQKPAAAEEVAVEKPVAEKEKEQAPAPVPEPEAPEKRTEESAAAAGVEEVVEAEKPKPVEGEKIAQSASFKEESNVVGELPDPQKKALDELKQLIQDALNKHEFTAPPPPPPPAAKEEEKAPEAPPKEKEAAAEEQVVKAEEPKTGEEEKKPAVEVESKAPESEPAAPAEVEVVVEKVATVDEDGAKTVEAIEETIVAAKPEVEEAEVTTTKKEAEVAAPSDEQTKDKEAEVPPEKVFIWGIPLLGDDRSDTILLKFLRARDFKVKDAFTMIKNTVRWRNEFGIDAVLEEDLGNDLDKVVFMHGVDKEGHPVCYNVFGEFQNKELYHNNFSDDEKRTKFLKWRIQFLEKSIRKLDFSPSGICTIVQINDLKNSPGPAKRDLRIATNQAVHLLQDNYPEFVARQVFINVPWWYLAFNRMISPFLTQRTKSKFVFSGPSKSAETLFKYVYLL
ccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccHHHccccHHHHccccccccccccHHccccccccHHcccccccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccccccccccccccEEEEEccccccccEEEEEcccccccHHHccccccHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHcccccHHccccEEEEcccccHHHHHHHcccc
ccccccccccccccEEEEEcccccEEEccccccccccccccccccccccccccccccHccccccccccccccccccHcccHHHcccHHHHHHHHHHHHHHHHHHcccccccccccccccHccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccEEEEEEccccccccccHHHccccEEEcccccccccccccccHccccccccccccccccccccHHHEEcccccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccHHHHHcccccHHHEEEEcccccccccEEEEEcccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHccccccccccHHHHHHHHHHHHHHHHHccHHHHHHEEEEEccHHHHHHHHHHccccccccccEEEEEcccHHHHHHHHHcccc
maedtqkpaaaeevavekpvaekekeqapapvpepeapekrteeSAAAAGVEEvveaekpkpvegekiaqsasfkeesnvvgelpdpqKKALDELKQLIQDALNkheftapppppppaakeeekapeappkekEAAAEEQVVkaeepktgeeekkpaveveskapesepaapaEVEVVVEKVATVDEDGAKTVEAIEETIVAakpeveeaevtttkkeaevaapsdeqtkdkeaevppekvfiwgipllgddrsdTILLKFLRARDFKVKDAFTMIKNTVRWRNEFGIDAVleedlgndldKVVFMhgvdkeghpvcynvfgefqnkelyhnnfsddeKRTKFLKWRIQFLEKSIrkldfspsgictivqindlknspgpakrdlrIATNQAVHLLQDNYPEFVARQVFINVPWWYLAFNRMispfltqrtkskfvfsgpsksaeTLFKYVYLL
maedtqkpaaaeevavekpvaekekeqapapvpepeapekrTEESAAaagveevveaekpkpvegekiaqsasfkeesnvvgELPDPQKKALDELKQLIQDALNKHEFTAPPPPPPPAAKEEEKAPEAPPKEKEAAAEEQvvkaeepktgeeekkpaveveskapesepaapaevEVVVEKVATVDEDGAKTVEAIEEtivaakpeveeaevtttkkeaevaapsdeqtkdkeaevppekvfiwgipllgddrSDTILLKFlrardfkvkdaftMIKNTVRWRNEFGIDAVLEEDLGNDLDKVVFMHGVDKEGHPVCYNVFGEFQNKELYHNNFSDDEKRTKFLKWRIQFLEksirkldfspsgICTIVQINDLKNSPGPAKRDLRIATNQAVHLLQDNYPEFVARQVFINVPWWYLAFNRMISPFLTQRTKSKfvfsgpsksaetlfkyvYLL
MAEDTqkpaaaeevavekpvaekekeqapapvpepeapekRTeesaaaagveevveaekpkpvegeKIAQSASFKEESNVVGELPDPQKKALDELKQLIQDALNKHEFTapppppppaakeeekapeappkekeaaaeeqvvkaeepktgeeekkpaveveskapesepaapaevevvvekvaTVDEDGAKTVEAIEETIvaakpeveeaevtttkkeaevaapSDEQTKDKEAEVPPEKVFIWGIPLLGDDRSDTILLKFLRARDFKVKDAFTMIKNTVRWRNEFGIDAVLEEDLGNDLDKVVFMHGVDKEGHPVCYNVFGEFQNKELYHNNFSDDEKRTKFLKWRIQFLEKSIRKLDFSPSGICTIVQINDLKNSPGPAKRDLRIATNQAVHLLQDNYPEFVARQVFINVPWWYLAFNRMISPFLTQRTKSKFVFSGPSKSAETLFKYVYLL
********************************************************************************************************************************************************************************VVVEKVATV*******V*AI***I***************************************KVFIWGIPLLGDDRSDTILLKFLRARDFKVKDAFTMIKNTVRWRNEFGIDAVLEEDLGNDLDKVVFMHGVDKEGHPVCYNVFGEFQNKELYHNNFSDDEKRTKFLKWRIQFLEKSIRKLDFSPSGICTIVQINDLK*******RDLRIATNQAVHLLQDNYPEFVARQVFINVPWWYLAFNRMISPFLTQRTKSKFVFSG****AETLFKYVYL*
*************************************************************************************************************************************************************************************************************************************KDKEAEVPPEKVFIWGIPLLGDDRSDTILLKFLRARDFKVKDAFTMIKNTVRWRNEFGIDAVLEEDLGNDLDKVVFMHGVDKEGHPVCYNVFGEFQNKELYHNNFSDDEKRTKFLKWRIQFLEKSIRKLDFSPSGICTIVQINDLKNSPGPAKRDLRIATNQAVHLLQDNYPEFVARQVFINVPWWYLAFNRMISPFLTQRTKSKFVFSGPSKSAETLFKYVYLL
****************************************************EVVEAEKPKPVEGEKIAQSA***********LPDPQKKALDELKQLIQDALNKHEFTAP***************************************************************VEVVVEKVATVDEDGAKTVEAIEETIVAAKP******************************VPPEKVFIWGIPLLGDDRSDTILLKFLRARDFKVKDAFTMIKNTVRWRNEFGIDAVLEEDLGNDLDKVVFMHGVDKEGHPVCYNVFGEFQNKELYHNNFSDDEKRTKFLKWRIQFLEKSIRKLDFSPSGICTIVQINDLKNSPGPAKRDLRIATNQAVHLLQDNYPEFVARQVFINVPWWYLAFNRMISPFLTQRTKSKFVFSGPSKSAETLFKYVYLL
************EVAVEKPVAEKEKEQAPAP***********************************************NVVGELPDPQKKALDELKQLIQDALNKHE********************************************************************EVVVEKVAT**************************************************EVPPEKVFIWGIPLLGDDRSDTILLKFLRARDFKVKDAFTMIKNTVRWRNEFGIDAVLEEDLGNDLDKVVFMHGVDKEGHPVCYNVFGEFQNKELYHNNFSDDEKRTKFLKWRIQFLEKSIRKLDFSPSGICTIVQINDLKNSPGPAKRDLRIATNQAVHLLQDNYPEFVARQVFINVPWWYLAFNRMISPFLTQRTKSKFVFSGPSKSAETLFKYVYLL
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAEDTQKPAAAEEVAVEKPVAEKEKEQAPAPVPEPEAPEKRTEESAAAAGVEEVVEAEKPKPVEGEKIAQSASFKEESNVVGELPDPQKKALDELKQLIQDALNKHEFTAPPPPPPPAAKEEEKAPEAPPKEKEAAAEEQVVKAEEPKTGEEEKKPAVEVESKAPESEPAAPAEVEVVVEKVATVDEDGAKTVEAIEETIVAAKPEVEEAEVTTTKKEAEVAAPSDEQTKDKEAEVPPEKVFIWGIPLLGDDRSDTILLKFLRARDFKVKDAFTMIKNTVRWRNEFGIDAVLEEDLGNDLDKVVFMHGVDKEGHPVCYNVFGEFQNKELYHNNFSDDEKRTKFLKWRIQFLEKSIRKLDFSPSGICTIVQINDLKNSPGPAKRDLRIATNQAVHLLQDNYPEFVARQVFINVPWWYLAFNRMISPFLTQRTKSKFVFSGPSKSAETLFKYVYLL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query454 2.2.26 [Sep-21-2011]
Q9M0R2 668 Patellin-5 OS=Arabidopsis yes no 0.466 0.317 0.693 4e-97
Q56Z59 490 Patellin-3 OS=Arabidopsis no no 0.737 0.683 0.532 1e-96
Q56ZI2 683 Patellin-2 OS=Arabidopsis no no 0.685 0.455 0.478 1e-78
Q56WK6 573 Patellin-1 OS=Arabidopsis no no 0.922 0.731 0.416 4e-75
Q9SCU1 409 Patellin-6 OS=Arabidopsis no no 0.453 0.503 0.551 1e-67
Q94C59 540 Patellin-4 OS=Arabidopsis no no 0.504 0.424 0.481 2e-66
A5DEQ9336 Phosphatidylinositol tran N/A no 0.407 0.550 0.298 1e-19
Q6C9R9 362 Phosphatidylinositol tran yes no 0.392 0.491 0.303 3e-19
Q6BWE5344 Phosphatidylinositol tran yes no 0.389 0.514 0.312 5e-17
A3LPR9328 Phosphatidylinositol tran yes no 0.389 0.539 0.312 1e-16
>sp|Q9M0R2|PATL5_ARATH Patellin-5 OS=Arabidopsis thaliana GN=PATL5 PE=1 SV=2 Back     alignment and function desciption
 Score =  355 bits (911), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 147/212 (69%), Positives = 183/212 (86%)

Query: 240 KVFIWGIPLLGDDRSDTILLKFLRARDFKVKDAFTMIKNTVRWRNEFGIDAVLEEDLGND 299
           K  IWG+PLL DDR+D +LLKFLRARDFK ++A++M+  T++WR +F I+ +L+E+LG+D
Sbjct: 324 KTSIWGVPLLKDDRTDVVLLKFLRARDFKPQEAYSMLNKTLQWRIDFNIEELLDENLGDD 383

Query: 300 LDKVVFMHGVDKEGHPVCYNVFGEFQNKELYHNNFSDDEKRTKFLKWRIQFLEKSIRKLD 359
           LDKVVFM G DKE HPVCYNV+GEFQNK+LY   FSD+EKR +FL+WRIQFLEKSIR LD
Sbjct: 384 LDKVVFMQGQDKENHPVCYNVYGEFQNKDLYQKTFSDEEKRERFLRWRIQFLEKSIRNLD 443

Query: 360 FSPSGICTIVQINDLKNSPGPAKRDLRIATNQAVHLLQDNYPEFVARQVFINVPWWYLAF 419
           F   G+ TI Q+NDLKNSPGP K +LR+AT QA+HLLQDNYPEFV++Q+FINVPWWYLAF
Sbjct: 444 FVAGGVSTICQVNDLKNSPGPGKTELRLATKQALHLLQDNYPEFVSKQIFINVPWWYLAF 503

Query: 420 NRMISPFLTQRTKSKFVFSGPSKSAETLFKYV 451
            R+ISPF++QR+KSK VF+GPS+SAETL KY+
Sbjct: 504 YRIISPFMSQRSKSKLVFAGPSRSAETLLKYI 535
Carrier protein that may be involved in membrane-trafficking events associated with cell plate formation during cytokinesis. Binds to some hydrophobic molecules such as phosphoinositides and promotes their transfer between the different cellular sites.
Arabidopsis thaliana (taxid: 3702)
>sp|Q56Z59|PATL3_ARATH Patellin-3 OS=Arabidopsis thaliana GN=PATL3 PE=1 SV=2 Back     alignment and function description
>sp|Q56ZI2|PATL2_ARATH Patellin-2 OS=Arabidopsis thaliana GN=PATL2 PE=1 SV=2 Back     alignment and function description
>sp|Q56WK6|PATL1_ARATH Patellin-1 OS=Arabidopsis thaliana GN=PATL1 PE=1 SV=2 Back     alignment and function description
>sp|Q9SCU1|PATL6_ARATH Patellin-6 OS=Arabidopsis thaliana GN=PATL6 PE=2 SV=1 Back     alignment and function description
>sp|Q94C59|PATL4_ARATH Patellin-4 OS=Arabidopsis thaliana GN=PATL4 PE=1 SV=2 Back     alignment and function description
>sp|A5DEQ9|SFH5_PICGU Phosphatidylinositol transfer protein SFH5 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) GN=SFH5 PE=3 SV=2 Back     alignment and function description
>sp|Q6C9R9|SFH5_YARLI Phosphatidylinositol transfer protein SFH5 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SFH5 PE=3 SV=1 Back     alignment and function description
>sp|Q6BWE5|SFH5_DEBHA Phosphatidylinositol transfer protein SFH5 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=SFH5 PE=3 SV=2 Back     alignment and function description
>sp|A3LPR9|SFH5_PICST Phosphatidylinositol transfer protein SFH5 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) GN=SFH5 PE=3 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query454
255561582 627 Patellin-3, putative [Ricinus communis] 0.876 0.634 0.647 1e-139
82469976 604 patellin 1 [Cucurbita pepo] 0.951 0.715 0.602 1e-135
449526800 606 PREDICTED: patellin-3-like [Cucumis sati 0.975 0.731 0.592 1e-133
255568869 606 Patellin-3, putative [Ricinus communis] 0.861 0.645 0.605 1e-130
224122762513 predicted protein [Populus trichocarpa] 0.806 0.713 0.615 1e-130
359480790 576 PREDICTED: patellin-5-like [Vitis vinife 0.843 0.664 0.616 1e-122
356507414 557 PREDICTED: patellin-5-like [Glycine max] 0.918 0.748 0.547 1e-120
449457287 568 PREDICTED: patellin-3-like [Cucumis sati 0.900 0.720 0.546 1e-120
449533230468 PREDICTED: patellin-3-like, partial [Cuc 0.914 0.886 0.565 1e-119
356512904539 PREDICTED: patellin-3-like [Glycine max] 0.755 0.636 0.605 1e-119
>gi|255561582|ref|XP_002521801.1| Patellin-3, putative [Ricinus communis] gi|223539014|gb|EEF40611.1| Patellin-3, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 285/440 (64%), Positives = 317/440 (72%), Gaps = 42/440 (9%)

Query: 52  EEVVEAEKP--KPVEGE---KIAQSASFKEESNVVGELPDPQKKALDELKQLIQDALNKH 106
           E VVEA K   KP EG    KI+QS SFKEE+NVVGELP+ QKKALDE KQLIQ+ALNKH
Sbjct: 61  EAVVEAMKGEDKPKEGTEEVKISQSVSFKEETNVVGELPEAQKKALDEFKQLIQEALNKH 120

Query: 107 EFTAPPPPPPPAAKEEEKAPEAPPKEKEAAAEEQVVKAEEPKTGEEEKKPAVEVESKAP- 165
           EFTAPPPPP    KEEEK    P K +E   EE+   ++ P T EE K    E E+ AP 
Sbjct: 121 EFTAPPPPPS-PVKEEEKKVAEPEKTEEPKVEEKTT-SDAPSTSEEPKPVGAESETAAPP 178

Query: 166 -------------------------------ESEPAAPAEVEVVVEKVATVDEDGAKTVE 194
                                          +         EVVV K++TVDEDGAKTVE
Sbjct: 179 PPVMEVKEEEKVVEEKKEEKVEEKVDVKEETKEAAPVVVAEEVVVSKISTVDEDGAKTVE 238

Query: 195 AIEETIVAAKPEVEEAEVTTTKKEAEVAAPSDEQ---TKDKEAEVPPEKVFIWGIPLLGD 251
           AIEET+VA        E      +   AAP +E            PPE+VFIWGIP+LGD
Sbjct: 239 AIEETVVAVSAPPAAVEEPAAPAKEAEAAPVEETKAEETPAPPPPPPEEVFIWGIPILGD 298

Query: 252 DRSDTILLKFLRARDFKVKDAFTMIKNTVRWRNEFGIDAVLEEDLGNDLDKVVFMHGVDK 311
           ++SD ILLKFLRARDFKVKDAFTMIKNTVRWR EFGIDA+LEEDLGN+L+K VFMHG D 
Sbjct: 299 EKSDVILLKFLRARDFKVKDAFTMIKNTVRWRKEFGIDALLEEDLGNELEKAVFMHGFDT 358

Query: 312 EGHPVCYNVFGEFQNKELYHNNFSDDEKRTKFLKWRIQFLEKSIRKLDFSPSGICTIVQI 371
           EGHPVCYNVFG FQ KELY N F+D+EKR KFL+WRIQFLEKSIRKLDFSP+GICTIVQ+
Sbjct: 359 EGHPVCYNVFGAFQEKELYQNCFADEEKRVKFLRWRIQFLEKSIRKLDFSPNGICTIVQV 418

Query: 372 NDLKNSPGPAKRDLRIATNQAVHLLQDNYPEFVARQVFINVPWWYLAFNRMISPFLTQRT 431
           NDLKNSPGPAKR+LR ATNQA+ +LQDNYPEFVA+QVFINVPWWYLAFNRMISPFLTQRT
Sbjct: 419 NDLKNSPGPAKRELRQATNQALAILQDNYPEFVAKQVFINVPWWYLAFNRMISPFLTQRT 478

Query: 432 KSKFVFSGPSKSAETLFKYV 451
           KSKFVF+GPSKSAETLFKYV
Sbjct: 479 KSKFVFAGPSKSAETLFKYV 498

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|82469976|gb|ABB77236.1| patellin 1 [Cucurbita pepo] Back     alignment and taxonomy information
>gi|449526800|ref|XP_004170401.1| PREDICTED: patellin-3-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|255568869|ref|XP_002525405.1| Patellin-3, putative [Ricinus communis] gi|223535296|gb|EEF36972.1| Patellin-3, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224122762|ref|XP_002330469.1| predicted protein [Populus trichocarpa] gi|222871881|gb|EEF09012.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359480790|ref|XP_002271899.2| PREDICTED: patellin-5-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|356507414|ref|XP_003522462.1| PREDICTED: patellin-5-like [Glycine max] Back     alignment and taxonomy information
>gi|449457287|ref|XP_004146380.1| PREDICTED: patellin-3-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449533230|ref|XP_004173579.1| PREDICTED: patellin-3-like, partial [Cucumis sativus] Back     alignment and taxonomy information
>gi|356512904|ref|XP_003525154.1| PREDICTED: patellin-3-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query454
TAIR|locus:2207016 490 AT1G72160 "AT1G72160" [Arabido 0.471 0.436 0.724 6.1e-95
TAIR|locus:2141563 668 AT4G09160 "AT4G09160" [Arabido 0.466 0.317 0.693 5e-89
TAIR|locus:2009502 683 PATL2 "PATELLIN 2" [Arabidopsi 0.471 0.313 0.6 4e-81
TAIR|locus:2207001 573 PATL1 "AT1G72150" [Arabidopsis 0.555 0.439 0.505 8.6e-71
TAIR|locus:2098282 409 AT3G51670 "AT3G51670" [Arabido 0.488 0.542 0.521 8.7e-67
TAIR|locus:2204594 540 AT1G30690 [Arabidopsis thalian 0.480 0.403 0.488 2.3e-66
DICTYBASE|DDB_G0270022 444 DDB_G0270022 "cellular retinal 0.541 0.554 0.303 3.5e-27
SGD|S000004684304 SEC14 "Phosphatidylinositol/ph 0.411 0.615 0.299 5.3e-18
CGD|CAL0005528320 orf19.4897 [Candida albicans ( 0.414 0.587 0.28 5.8e-18
ZFIN|ZDB-GENE-060526-180 395 si:ch211-89f7.1 "si:ch211-89f7 0.429 0.493 0.287 2.9e-13
TAIR|locus:2207016 AT1G72160 "AT1G72160" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 853 (305.3 bits), Expect = 6.1e-95, Sum P(2) = 6.1e-95
 Identities = 155/214 (72%), Positives = 183/214 (85%)

Query:   238 PEKVFIWGIPLLGDDRSDTILLKFLRARDFKVKDAFTMIKNTVRWRNEFGIDAVLEEDLG 297
             PE+V IWGIPLL DDRSD +LLKFLRAR+FKVKD+F M+KNT++WR EF ID ++EEDL 
Sbjct:   147 PEEVKIWGIPLLEDDRSDVVLLKFLRAREFKVKDSFAMLKNTIKWRKEFKIDELVEEDLV 206

Query:   298 NDLDKVVFMHGVDKEGHPVCYNVFGEFQNKELYHNNFSDDEKRTKFLKWRIQFLEKSIRK 357
             +DLDKVVFMHG D+EGHPVCYNV+GEFQNKELY+  FSD+EKR  FL+ RIQFLE+SIRK
Sbjct:   207 DDLDKVVFMHGHDREGHPVCYNVYGEFQNKELYNKTFSDEEKRKHFLRTRIQFLERSIRK 266

Query:   358 LDFSPSGICTIVQINDLKNSPGPAKRDLRIATNQAVHLLQDNYPEFVARQVFINVPWWYL 417
             LDFS  G+ TI Q+ND+KNSPG  K++LR AT QAV LLQDNYPEFV +Q FINVPWWYL
Sbjct:   267 LDFSSGGVSTIFQVNDMKNSPGLGKKELRSATKQAVELLQDNYPEFVFKQAFINVPWWYL 326

Query:   418 AFNRMISPFLTQRTKSKFVFSGPSKSAETLFKYV 451
              F  +I PF+T R+KSK VF+GPS+SAETLFKY+
Sbjct:   327 VFYTVIGPFMTPRSKSKLVFAGPSRSAETLFKYI 360
GO:0005215 "transporter activity" evidence=ISS
GO:0005634 "nucleus" evidence=ISM
GO:0006810 "transport" evidence=IEA;ISS
GO:0016021 "integral to membrane" evidence=IEA
GO:0005886 "plasma membrane" evidence=IDA
GO:0005829 "cytosol" evidence=RCA
TAIR|locus:2141563 AT4G09160 "AT4G09160" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2009502 PATL2 "PATELLIN 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2207001 PATL1 "AT1G72150" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2098282 AT3G51670 "AT3G51670" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2204594 AT1G30690 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0270022 DDB_G0270022 "cellular retinaldehyde-binding/triple function domain-containing protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
SGD|S000004684 SEC14 "Phosphatidylinositol/phosphatidylcholine transfer protein" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
CGD|CAL0005528 orf19.4897 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-060526-180 si:ch211-89f7.1 "si:ch211-89f7.1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
gw1.135.50.1
hypothetical protein (383 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query454
cd00170157 cd00170, SEC14, Sec14p-like lipid-binding domain 2e-34
smart00516158 smart00516, SEC14, Domain in homologues of a S 1e-28
pfam00650152 pfam00650, CRAL_TRIO, CRAL/TRIO domain 1e-21
pfam0376548 pfam03765, CRAL_TRIO_N, CRAL/TRIO, N-terminal doma 2e-08
PTZ00121 2084 PTZ00121, PTZ00121, MAEBL; Provisional 3e-08
smart0110048 smart01100, CRAL_TRIO_N, CRAL/TRIO, N-terminal dom 6e-07
PRK108111068 PRK10811, rne, ribonuclease E; Reviewed 1e-06
PRK07003830 PRK07003, PRK07003, DNA polymerase III subunits ga 3e-06
PRK108111068 PRK10811, rne, ribonuclease E; Reviewed 4e-06
PRK108111068 PRK10811, rne, ribonuclease E; Reviewed 6e-06
PRK05306 746 PRK05306, infB, translation initiation factor IF-2 9e-06
PTZ00121 2084 PTZ00121, PTZ00121, MAEBL; Provisional 1e-05
PRK108111068 PRK10811, rne, ribonuclease E; Reviewed 1e-05
PRK108111068 PRK10811, rne, ribonuclease E; Reviewed 1e-05
PRK108111068 PRK10811, rne, ribonuclease E; Reviewed 1e-05
PTZ00121 2084 PTZ00121, PTZ00121, MAEBL; Provisional 2e-05
PRK108111068 PRK10811, rne, ribonuclease E; Reviewed 3e-05
PRK07994647 PRK07994, PRK07994, DNA polymerase III subunits ga 3e-05
PRK05035695 PRK05035, PRK05035, electron transport complex pro 4e-05
PRK108111068 PRK10811, rne, ribonuclease E; Reviewed 5e-05
PTZ00121 2084 PTZ00121, PTZ00121, MAEBL; Provisional 9e-05
PTZ001212084 PTZ00121, PTZ00121, MAEBL; Provisional 1e-04
PRK07994647 PRK07994, PRK07994, DNA polymerase III subunits ga 2e-04
PRK12323700 PRK12323, PRK12323, DNA polymerase III subunits ga 2e-04
COG5271 4600 COG5271, MDN1, AAA ATPase containing von Willebran 5e-04
PRK12323700 PRK12323, PRK12323, DNA polymerase III subunits ga 7e-04
PRK07764824 PRK07764, PRK07764, DNA polymerase III subunits ga 7e-04
PTZ001212084 PTZ00121, PTZ00121, MAEBL; Provisional 0.001
PRK07764824 PRK07764, PRK07764, DNA polymerase III subunits ga 0.001
TIGR02927579 TIGR02927, SucB_Actino, 2-oxoglutarate dehydrogena 0.001
PLN032371465 PLN03237, PLN03237, DNA topoisomerase 2; Provision 0.001
PRK07994647 PRK07994, PRK07994, DNA polymerase III subunits ga 0.002
PRK07994647 PRK07994, PRK07994, DNA polymerase III subunits ga 0.002
PRK13108460 PRK13108, PRK13108, prolipoprotein diacylglyceryl 0.002
PLN02226463 PLN02226, PLN02226, 2-oxoglutarate dehydrogenase E 0.002
PRK11854633 PRK11854, aceF, pyruvate dehydrogenase dihydrolipo 0.002
COG3064387 COG3064, TolA, Membrane protein involved in colici 0.003
>gnl|CDD|238099 cd00170, SEC14, Sec14p-like lipid-binding domain Back     alignment and domain information 
 Score =  125 bits (317), Expect = 2e-34
 Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 13/154 (8%)

Query: 298 NDLDKVVFMHGVDKEGHPVCYNVFGEFQNKELYHNNFSDDEKRTKFLKWRIQFLEKSIRK 357
            +L KV ++ G DKEG PV     G     +    +   +E     L++ +  LEK +++
Sbjct: 5   KELGKVGYLGGRDKEGRPVLIIRAG----NKDLSKSLDSEE----LLRYLVYTLEKLLQE 56

Query: 358 LDFSPSGICTIVQINDLKNSPGPAKRDLRIATNQAVHLLQDNYPEFVARQVFINVPWWYL 417
            D    G   I+   DLK               + + +LQDNYPE +     IN PW++ 
Sbjct: 57  DDEQVEGFVVII---DLKGLSLSHLLPDPSLLKKILKILQDNYPERLKAVYIINPPWFFK 113

Query: 418 AFNRMISPFLTQRTKSKFVFSGPSKSAETLFKYV 451
              +++ PFL+++T+ K VF G  K  E L KY+
Sbjct: 114 VLWKIVKPFLSEKTRKKIVFLGSDK--EELLKYI 145

Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to associate with G protein beta/gamma subunits. Length = 157
>gnl|CDD|214706 smart00516, SEC14, Domain in homologues of a S Back     alignment and domain information
>gnl|CDD|216042 pfam00650, CRAL_TRIO, CRAL/TRIO domain Back     alignment and domain information
>gnl|CDD|217718 pfam03765, CRAL_TRIO_N, CRAL/TRIO, N-terminal domain Back     alignment and domain information
>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional Back     alignment and domain information
>gnl|CDD|215024 smart01100, CRAL_TRIO_N, CRAL/TRIO, N-terminal domain Back     alignment and domain information
>gnl|CDD|236766 PRK10811, rne, ribonuclease E; Reviewed Back     alignment and domain information
>gnl|CDD|235906 PRK07003, PRK07003, DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>gnl|CDD|236766 PRK10811, rne, ribonuclease E; Reviewed Back     alignment and domain information
>gnl|CDD|236766 PRK10811, rne, ribonuclease E; Reviewed Back     alignment and domain information
>gnl|CDD|235401 PRK05306, infB, translation initiation factor IF-2; Validated Back     alignment and domain information
>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional Back     alignment and domain information
>gnl|CDD|236766 PRK10811, rne, ribonuclease E; Reviewed Back     alignment and domain information
>gnl|CDD|236766 PRK10811, rne, ribonuclease E; Reviewed Back     alignment and domain information
>gnl|CDD|236766 PRK10811, rne, ribonuclease E; Reviewed Back     alignment and domain information
>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional Back     alignment and domain information
>gnl|CDD|236766 PRK10811, rne, ribonuclease E; Reviewed Back     alignment and domain information
>gnl|CDD|236138 PRK07994, PRK07994, DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>gnl|CDD|235334 PRK05035, PRK05035, electron transport complex protein RnfC; Provisional Back     alignment and domain information
>gnl|CDD|236766 PRK10811, rne, ribonuclease E; Reviewed Back     alignment and domain information
>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional Back     alignment and domain information
>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional Back     alignment and domain information
>gnl|CDD|236138 PRK07994, PRK07994, DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>gnl|CDD|237057 PRK12323, PRK12323, DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>gnl|CDD|227596 COG5271, MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only] Back     alignment and domain information
>gnl|CDD|237057 PRK12323, PRK12323, DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>gnl|CDD|236090 PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional Back     alignment and domain information
>gnl|CDD|236090 PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>gnl|CDD|200219 TIGR02927, SucB_Actino, 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase Back     alignment and domain information
>gnl|CDD|215641 PLN03237, PLN03237, DNA topoisomerase 2; Provisional Back     alignment and domain information
>gnl|CDD|236138 PRK07994, PRK07994, DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>gnl|CDD|236138 PRK07994, PRK07994, DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>gnl|CDD|237284 PRK13108, PRK13108, prolipoprotein diacylglyceryl transferase; Reviewed Back     alignment and domain information
>gnl|CDD|177871 PLN02226, PLN02226, 2-oxoglutarate dehydrogenase E2 component Back     alignment and domain information
>gnl|CDD|236999 PRK11854, aceF, pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated Back     alignment and domain information
>gnl|CDD|225606 COG3064, TolA, Membrane protein involved in colicin uptake [Cell envelope biogenesis, outer membrane] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 454
KOG1470324 consensus Phosphatidylinositol transfer protein PD 100.0
KOG1471317 consensus Phosphatidylinositol transfer protein SE 100.0
PF00650159 CRAL_TRIO: CRAL/TRIO domain; InterPro: IPR001251 T 99.92
smart00516158 SEC14 Domain in homologues of a S. cerevisiae phos 99.89
cd00170157 SEC14 Sec14p-like lipid-binding domain. Found in s 99.86
PF13716149 CRAL_TRIO_2: Divergent CRAL/TRIO domain; PDB: 2D4Q 99.27
KOG4406 467 consensus CDC42 Rho GTPase-activating protein [Sig 98.36
PF0376555 CRAL_TRIO_N: CRAL/TRIO, N-terminal domain; InterPr 98.29
>KOG1470 consensus Phosphatidylinositol transfer protein PDR16 and related proteins [Lipid transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=5e-36  Score=299.99  Aligned_cols=186  Identities=32%  Similarity=0.553  Sum_probs=162.8

Q ss_pred             CCCCHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHcCCCC-cccchhhccc-cceeeeeccCCCCCeEEEEecccccccc
Q 012901          251 DDRSDTILLKFLRARDFKVKDAFTMIKNTVRWRNEFGIDA-VLEEDLGNDL-DKVVFMHGVDKEGHPVCYNVFGEFQNKE  328 (454)
Q Consensus       251 d~~dD~~LLRFLRArkfDVekA~~~Lk~~l~WRk~~~id~-i~~edl~~el-~k~~fl~G~Dk~GrPViy~rlg~~d~k~  328 (454)
                      .+++|.+|+||||||+||+++|.+||.++|.||+.+++.. +.++.+..++ .|.+|++|+|+.||||+|+++...    
T Consensus        45 ~~~~d~cllRfLrAr~wnv~kA~kml~~tL~WR~~~~~~~~~~~~Ev~~e~~tGK~yi~G~D~~gRPVl~~~~~~~----  120 (324)
T KOG1470|consen   45 KWCSDACLLRFLRARKWNVKKASKMLSNTLKWRRSFGPEEVIEADEVAAELETGKAYILGHDKDGRPVLYLRPRPH----  120 (324)
T ss_pred             hcCcHHHHHHHHHHcCCcHHHHHHHHHHHhHHHHhcCCccccCHHHHHHHhhcCcEEEecccCCCCeEEEEecCCC----
Confidence            4679999999999999999999999999999999999988 6666665454 478999999999999999975532    


Q ss_pred             cccccCCChHHHHHHHHHHHHHHHHHHHhhccCCCCeeEEEEEEeCCCCCCCCchhHHHHHHHHHHHHHhhcccccceEE
Q 012901          329 LYHNNFSDDEKRTKFLKWRIQFLEKSIRKLDFSPSGICTIVQINDLKNSPGPAKRDLRIATNQAVHLLQDNYPEFVARQV  408 (454)
Q Consensus       329 l~~~tf~d~e~~~~flr~~i~llE~~i~~ld~~~~gv~~iviIiDLkG~sgl~~~~l~~~iK~il~lLqd~YPErL~kI~  408 (454)
                       ++++.    +...+.|+++|+||.++..|   +.|+.++++++|++|+| +++.+ ..+.+.++.+||+|||+||+..+
T Consensus       121 -~qn~~----t~~~~~r~~Vy~mE~Ai~~l---p~~qe~~~~L~D~~~fs-~sN~d-~~~~k~~~~~lq~hYPErLg~a~  190 (324)
T KOG1470|consen  121 -RQNTK----TQKELERLLVYTLENAILFL---PPGQEQFVWLFDLTGFS-MSNPD-IKFLKELLHILQDHYPERLGKAL  190 (324)
T ss_pred             -CCCCC----CHHHHHHHHHHHHHHHHHhC---CCCcceEEEEEecccCc-ccCCC-cHHHHHHHHHHHHhChHHhhhhh
Confidence             12222    25788999999999998765   67899999999999997 66767 68999999999999999999999


Q ss_pred             EEeCChHHHHHHHHHhhcCCHhhhcceEEeCCCCCHHHHHhhhcc
Q 012901          409 FINVPWWYLAFNRMISPFLTQRTKSKFVFSGPSKSAETLFKYVYL  453 (454)
Q Consensus       409 IINaP~~f~~lwkiIKpFL~~kTr~KI~fl~~sk~~etLlk~Idp  453 (454)
                      |+|+||+|..+|++++|||++.|++||+|+.+   .+.|.+|||+
T Consensus       191 l~~~P~iF~~~wkiikpflDp~t~~Kv~F~~~---~~~l~~~~d~  232 (324)
T KOG1470|consen  191 LVNAPWIFQPFWKIIKPFLDPKTASKVKFVEP---KDDLSEYFDE  232 (324)
T ss_pred             hcCChHHHHHHHHHhhhccChhhhceeEEecC---hhHHHhhCCc
Confidence            99999999999999999999999999999985   4569999986

>KOG1471 consensus Phosphatidylinositol transfer protein SEC14 and related proteins [Lipid transport and metabolism] Back     alignment and domain information
>PF00650 CRAL_TRIO: CRAL/TRIO domain; InterPro: IPR001251 This entry defines the C-terminal of various retinaldehyde/retinal-binding proteins that may be functional components of the visual cycle Back     alignment and domain information
>smart00516 SEC14 Domain in homologues of a S Back     alignment and domain information
>cd00170 SEC14 Sec14p-like lipid-binding domain Back     alignment and domain information
>PF13716 CRAL_TRIO_2: Divergent CRAL/TRIO domain; PDB: 2D4Q_B 3PG7_B 2E2X_B 3P7Z_B 3PEG_A Back     alignment and domain information
>KOG4406 consensus CDC42 Rho GTPase-activating protein [Signal transduction mechanisms; Cytoskeleton] Back     alignment and domain information
>PF03765 CRAL_TRIO_N: CRAL/TRIO, N-terminal domain; InterPro: IPR008273 This entry defines the N-terminal of various retinaldehyde/retinal-binding proteins that may be functional components of the visual cycle Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query454
1aua_A296 Phosphatidylinositol Transfer Protein Sec14p From S 7e-16
4fmm_A360 Dimeric Sec14 Family Homolog 3 From Saccharomyces C 2e-14
3b74_A320 Crystal Structure Of Yeast Sec14 Homolog Sfh1 In Co 4e-12
3q8g_A320 Resurrection Of A Functional Phosphatidylinositol T 5e-12
1olm_E 403 Supernatant Protein Factor In Complex With Rrr-Alph 6e-10
1olm_A 403 Supernatant Protein Factor In Complex With Rrr-Alph 6e-10
1oip_A278 The Molecular Basis Of Vitamin E Retention: Structu 3e-08
1o6u_A 403 The Crystal Structure Of Human Supernatant Protein 2e-07
1r5l_A262 Crystal Structure Of Human Alpha-tocopherol Transfe 5e-07
3hx3_A316 Crystal Structure Of Cralbp Mutant R234w Length = 3 6e-05
3hy5_A316 Crystal Structure Of Cralbp Length = 316 8e-05
>pdb|1AUA|A Chain A, Phosphatidylinositol Transfer Protein Sec14p From Saccharomyces Cerevisiae Length = 296 Back     alignment and structure 
Iteration: 1

 Score = 82.0 bits (201), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 93/204 (45%), Gaps = 17/204 (8%)
Query: 255 DTILLKFLRARDFKVKDAFTMIKNTVRWRNEFGIDAVLEEDLGNDLDKVV------FMHG 308
           D+ LL+FLRAR F V+ A  M +N  +WR ++G D +L +D   D   ++      + H 
Sbjct: 52  DSTLLRFLRARKFDVQLAKEMFENCEKWRKDYGTDTIL-QDFHYDEKPLIAKFYPQYYHK 110
Query: 309 VDKEGHPVCYNVFGEFQNKELYHNNFSDDEKRTKFLKWR----IQF-LEKSIRKLDFSPS 363
            DK+G PV +   G     E+  N  + +E+  K L W     +Q+ L    R       
Sbjct: 111 TDKDGRPVYFEELGAVNLHEM--NKVTSEERMLKNLVWEYESVVQYRLPACSRAAGHLVE 168
Query: 364 GICTIVQINDLKNSPGPAKRDLRIATNQAVHLLQDNYPEFVARQVFINVPWWYLAFNRMI 423
             CTI+   DLK     +   +     +A ++ Q+ YPE + +   IN P+ +    R+ 
Sbjct: 169 TSCTIM---DLKGISISSAYSVMSYVREASYISQNYYPERMGKFYIINAPFGFSTAFRLF 225
Query: 424 SPFLTQRTKSKFVFSGPSKSAETL 447
            PFL   T SK    G S   E L
Sbjct: 226 KPFLDPVTVSKIFILGSSYQKELL 249
>pdb|4FMM|A Chain A, Dimeric Sec14 Family Homolog 3 From Saccharomyces Cerevisiae Presents Some Novel Features Of Structure That Lead To A Surprising "dimer- Monomer" State Change Induced By Substrate Binding Length = 360 Back     alignment and structure
>pdb|3B74|A Chain A, Crystal Structure Of Yeast Sec14 Homolog Sfh1 In Complex With Phosphatidylethanolamine Length = 320 Back     alignment and structure
>pdb|3Q8G|A Chain A, Resurrection Of A Functional Phosphatidylinositol Transfer Protein From A Pseudo-Sec14 Scaffold By Directed Evolution Length = 320 Back     alignment and structure
>pdb|1OLM|E Chain E, Supernatant Protein Factor In Complex With Rrr-Alpha-Tocopherylquinone: A Link Between Oxidized Vitamin E And Cholesterol Biosynthesis Length = 403 Back     alignment and structure
>pdb|1OLM|A Chain A, Supernatant Protein Factor In Complex With Rrr-Alpha-Tocopherylquinone: A Link Between Oxidized Vitamin E And Cholesterol Biosynthesis Length = 403 Back     alignment and structure
>pdb|1OIP|A Chain A, The Molecular Basis Of Vitamin E Retention: Structure Of Human Alpha-tocopherol Transfer Protein Length = 278 Back     alignment and structure
>pdb|1O6U|A Chain A, The Crystal Structure Of Human Supernatant Protein Factor Length = 403 Back     alignment and structure
>pdb|1R5L|A Chain A, Crystal Structure Of Human Alpha-tocopherol Transfer Protein Bound To Its Ligand Length = 262 Back     alignment and structure
>pdb|3HX3|A Chain A, Crystal Structure Of Cralbp Mutant R234w Length = 316 Back     alignment and structure
>pdb|3HY5|A Chain A, Crystal Structure Of Cralbp Length = 316 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query454
1aua_A296 Phosphatidylinositol transfer protein SEC14P; phos 3e-58
3q8g_A320 CRAL-TRIO domain-containing protein YKL091C; strin 6e-57
1olm_A 403 SEC14-like protein 2; lipid-binding protein, chole 5e-54
1r5l_A262 Alpha-TTP, protein (alpha-tocopherol transfer prot 7e-31
3hx3_A316 Retinaldehyde-binding protein 1; lipid transfer pr 2e-27
3gdb_A 937 Endo-D, putative uncharacterized protein SPR0440; 6e-11
3gdb_A 937 Endo-D, putative uncharacterized protein SPR0440; 8e-11
3gdb_A 937 Endo-D, putative uncharacterized protein SPR0440; 3e-09
3gdb_A 937 Endo-D, putative uncharacterized protein SPR0440; 2e-07
3gdb_A 937 Endo-D, putative uncharacterized protein SPR0440; 2e-05
2yhs_A 503 FTSY, cell division protein FTSY; cell cycle, prot 6e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-04
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-04
>1aua_A Phosphatidylinositol transfer protein SEC14P; phospholipid-binding protein, peripheral golgi membrane protein, phospholipid exchange; HET: BOG; 2.50A {Saccharomyces cerevisiae} SCOP: a.5.3.1 c.13.1.1 Length = 296 Back     alignment and structure
 Score =  192 bits (490), Expect = 3e-58
 Identities = 53/214 (24%), Positives = 90/214 (42%), Gaps = 16/214 (7%)

Query: 248 LLGDDRSDTILLKFLRARDFKVKDAFTMIKNTVRWRNEFGIDAVLEEDLGNDLDKVV--- 304
              +   D+ LL+FLRAR F V+ A  M +N  +WR ++G D +L++   ++   +    
Sbjct: 45  GFIERLDDSTLLRFLRARKFDVQLAKEMFENCEKWRKDYGTDTILQDFHYDEKPLIAKFY 104

Query: 305 --FMHGVDKEGHPVCYNVFGEFQNKELYHNNFSDDEKRTKFLKWRIQFLEKSIRKL---- 358
             + H  DK+G PV +   G     E+      +       LK  +   E  ++      
Sbjct: 105 PQYYHKTDKDGRPVYFEELGAVNLHEMNKVTSEER-----MLKNLVWEYESVVQYRLPAC 159

Query: 359 -DFSPSGICTIVQINDLKNSPGPAKRDLRIATNQAVHLLQDNYPEFVARQVFINVPWWYL 417
              +   + T   I DLK     +   +     +A ++ Q+ YPE + +   IN P+ + 
Sbjct: 160 SRAAGHLVETSCTIMDLKGISISSAYSVMSYVREASYISQNYYPERMGKFYIINAPFGFS 219

Query: 418 AFNRMISPFLTQRTKSKFVFSGPSKSAETLFKYV 451
              R+  PFL   T SK    G S   + L K +
Sbjct: 220 TAFRLFKPFLDPVTVSKIFILG-SSYQKELLKQI 252
>3q8g_A CRAL-TRIO domain-containing protein YKL091C; string motif, signaling protein, directed evoluti SEC14, phospholipid transporter, lipid; HET: PEE; 1.80A {Saccharomyces cerevisiae} PDB: 3b7n_A* 3b74_A* 3b7q_A* 3b7z_A* Length = 320 Back     alignment and structure
>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E* Length = 403 Back     alignment and structure
>1r5l_A Alpha-TTP, protein (alpha-tocopherol transfer protein); ataxia with vitamin E deficiency, transport protein; HET: MSE VIV; 1.50A {Homo sapiens} SCOP: a.5.3.1 c.13.1.1 PDB: 1oiz_A* 1oip_A* Length = 262 Back     alignment and structure
>3hx3_A Retinaldehyde-binding protein 1; lipid transfer protein, 11-CIS-retinal, bothnia dystrophy, acetylation, cytoplasm, disease mutation; HET: RET; 1.69A {Homo sapiens} PDB: 3hy5_A* Length = 316 Back     alignment and structure
>3gdb_A Endo-D, putative uncharacterized protein SPR0440; alpha-beta-barrels, cell WALL, peptidoglycan-anchor, secreted, hydrolase; HET: PGE; 1.87A {Streptococcus pneumoniae} PDB: 2xqx_A Length = 937 Back     alignment and structure
>3gdb_A Endo-D, putative uncharacterized protein SPR0440; alpha-beta-barrels, cell WALL, peptidoglycan-anchor, secreted, hydrolase; HET: PGE; 1.87A {Streptococcus pneumoniae} PDB: 2xqx_A Length = 937 Back     alignment and structure
>3gdb_A Endo-D, putative uncharacterized protein SPR0440; alpha-beta-barrels, cell WALL, peptidoglycan-anchor, secreted, hydrolase; HET: PGE; 1.87A {Streptococcus pneumoniae} PDB: 2xqx_A Length = 937 Back     alignment and structure
>3gdb_A Endo-D, putative uncharacterized protein SPR0440; alpha-beta-barrels, cell WALL, peptidoglycan-anchor, secreted, hydrolase; HET: PGE; 1.87A {Streptococcus pneumoniae} PDB: 2xqx_A Length = 937 Back     alignment and structure
>3gdb_A Endo-D, putative uncharacterized protein SPR0440; alpha-beta-barrels, cell WALL, peptidoglycan-anchor, secreted, hydrolase; HET: PGE; 1.87A {Streptococcus pneumoniae} PDB: 2xqx_A Length = 937 Back     alignment and structure
>2yhs_A FTSY, cell division protein FTSY; cell cycle, protein targeting, simibi class GTPase, GTP-BIND membrane, nucleotide-binding; 1.60A {Escherichia coli} PDB: 2qy9_A 2xxa_B* 1fts_A Length = 503 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query454
1aua_A296 Phosphatidylinositol transfer protein SEC14P; phos 100.0
1olm_A 403 SEC14-like protein 2; lipid-binding protein, chole 100.0
3q8g_A320 CRAL-TRIO domain-containing protein YKL091C; strin 100.0
1r5l_A262 Alpha-TTP, protein (alpha-tocopherol transfer prot 100.0
3hx3_A316 Retinaldehyde-binding protein 1; lipid transfer pr 100.0
3pg7_A 256 Neurofibromin; SEC lipid binding domain, PH domain 99.11
3peg_A 290 Neurofibromin; SEC14 domain, pleckstrin homology d 98.9
>1aua_A Phosphatidylinositol transfer protein SEC14P; phospholipid-binding protein, peripheral golgi membrane protein, phospholipid exchange; HET: BOG; 2.50A {Saccharomyces cerevisiae} SCOP: a.5.3.1 c.13.1.1 Back     alignment and structure
Probab=100.00  E-value=8.4e-38  Score=309.30  Aligned_cols=197  Identities=27%  Similarity=0.385  Sum_probs=163.6

Q ss_pred             CCCCCHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHcCCCCcccchhh---ccccc--eeeeeccCCCCCeEEEEecccc
Q 012901          250 GDDRSDTILLKFLRARDFKVKDAFTMIKNTVRWRNEFGIDAVLEEDLG---NDLDK--VVFMHGVDKEGHPVCYNVFGEF  324 (454)
Q Consensus       250 ~d~~dD~~LLRFLRArkfDVekA~~~Lk~~l~WRk~~~id~i~~edl~---~el~k--~~fl~G~Dk~GrPViy~rlg~~  324 (454)
                      +...||.+|+||||+|+||+++|.+||++++.||+.++++.++.+...   ..+.+  ..+++|+|++||||+|+++|++
T Consensus        47 ~~~~dd~~LlRFLrarkfdv~~A~~~l~~~l~wR~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~Dk~GrpV~i~~~g~~  126 (296)
T 1aua_A           47 IERLDDSTLLRFLRARKFDVQLAKEMFENCEKWRKDYGTDTILQDFHYDEKPLIAKFYPQYYHKTDKDGRPVYFEELGAV  126 (296)
T ss_dssp             CSSCSHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTGGGHHHHCCCTTHHHHGGGSCCEEEEECTTSCEEEEECGGGC
T ss_pred             CCCCchHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCcchhhhccccCcHHHHHHhCCceecccCCCCCEEEEEeeccC
Confidence            456799999999999999999999999999999999998877653221   12222  2468999999999999999999


Q ss_pred             cccccccccCCChHHHHHHHHHHHHHHHHHHHhhc-----cCCCCeeEEEEEEeCCCCCCCCch-hHHHHHHHHHHHHHh
Q 012901          325 QNKELYHNNFSDDEKRTKFLKWRIQFLEKSIRKLD-----FSPSGICTIVQINDLKNSPGPAKR-DLRIATNQAVHLLQD  398 (454)
Q Consensus       325 d~k~l~~~tf~d~e~~~~flr~~i~llE~~i~~ld-----~~~~gv~~iviIiDLkG~sgl~~~-~l~~~iK~il~lLqd  398 (454)
                      |.+.+++..     ..+++++++++++|.+++.+.     ..+..+.++++|+||+|++ +++. .+.++++.++.++|+
T Consensus       127 d~~~~~~~~-----~~~~~~~~~~~~~E~~~~~~~~~~s~~~g~~v~~~~~I~D~~g~s-~~~~~~~~~~~k~~~~~~q~  200 (296)
T 1aua_A          127 NLHEMNKVT-----SEERMLKNLVWEYESVVQYRLPACSRAAGHLVETSCTIMDLKGIS-ISSAYSVMSYVREASYISQN  200 (296)
T ss_dssp             CHHHHTTTC-----CHHHHHHHHHHHHHHHHHTHHHHHHHHHTSCCCCEEEEEECTTCC-HHHHHHHHHHHHHHHHHHHH
T ss_pred             ChHHhhccC-----CHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeEEEEEECCCCC-HHHHHHHHHHHHHHHHHHHH
Confidence            988765432     257899999999999876421     1134588999999999885 3222 235788999999999


Q ss_pred             hcccccceEEEEeCChHHHHHHHHHhhcCCHhhhcceEEeCCCCCHHHHHhhhcc
Q 012901          399 NYPEFVARQVFINVPWWYLAFNRMISPFLTQRTKSKFVFSGPSKSAETLFKYVYL  453 (454)
Q Consensus       399 ~YPErL~kI~IINaP~~f~~lwkiIKpFL~~kTr~KI~fl~~sk~~etLlk~Idp  453 (454)
                      |||+||+++||||+||+|+++|++++|||+++|++||+|+++ ++.+.|++|||+
T Consensus       201 ~YPerl~~i~iiN~P~~f~~~~~iikpfl~~~t~~KI~~~~~-~~~~~L~~~i~~  254 (296)
T 1aua_A          201 YYPERMGKFYIINAPFGFSTAFRLFKPFLDPVTVSKIFILGS-SYQKELLKQIPA  254 (296)
T ss_dssp             HSTTCEEEEEEESCCHHHHHHHHHHGGGSCHHHHTTEEECCS-CCHHHHTTTSCS
T ss_pred             hHHHhhCeEEEECchHHHHHHHHHHHhhcCHhhcceEEEeCc-ccHHHHHhhCCH
Confidence            999999999999999999999999999999999999999986 368899999985
>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E* Back     alignment and structure
>3q8g_A CRAL-TRIO domain-containing protein YKL091C; string motif, signaling protein, directed evoluti SEC14, phospholipid transporter, lipid; HET: PEE; 1.80A {Saccharomyces cerevisiae} PDB: 3b7n_A* 3b74_A* 3b7q_A* 3b7z_A* Back     alignment and structure
>1r5l_A Alpha-TTP, protein (alpha-tocopherol transfer protein); ataxia with vitamin E deficiency, transport protein; HET: MSE VIV; 1.50A {Homo sapiens} SCOP: a.5.3.1 c.13.1.1 PDB: 1oiz_A* 1oip_A* Back     alignment and structure
>3hx3_A Retinaldehyde-binding protein 1; lipid transfer protein, 11-CIS-retinal, bothnia dystrophy, acetylation, cytoplasm, disease mutation; HET: RET; 1.69A {Homo sapiens} PDB: 3hy5_A* Back     alignment and structure
>3pg7_A Neurofibromin; SEC lipid binding domain, PH domain, lipid binding protein; HET: PTY; 2.19A {Homo sapiens} PDB: 2e2x_A* 3p7z_A* 2d4q_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 454
d1olma3199 c.13.1.1 (A:76-274) Supernatant protein factor (SP 3e-30
d1auaa2203 c.13.1.1 (A:97-299) C-terminal domain of phosphati 5e-29
d1r5la2185 c.13.1.1 (A:91-275) Alpha-tocopherol transfer prot 1e-15
d1olma175 a.5.3.1 (A:1-75) Supernatant protein factor (SPF), 1e-13
d1auaa193 a.5.3.1 (A:4-96) N-terminal domain of phosphatidyl 1e-10
d1r5la166 a.5.3.1 (A:25-90) Alpha-tocopherol transfer protei 2e-10
>d1olma3 c.13.1.1 (A:76-274) Supernatant protein factor (SPF), middle domain {Human (Homo sapiens) [TaxId: 9606]} Length = 199 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: Supernatant protein factor (SPF), middle domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  114 bits (286), Expect = 3e-30
 Identities = 34/151 (22%), Positives = 64/151 (42%), Gaps = 11/151 (7%)

Query: 306 MHGVDKEGHPVCYNVFGEFQNKELYHNNFSDDEKRTKFLKWRIQFLEKSIRKLDFS---- 361
           M G D +G PV Y++ G    K L  +    D      L+ +++  E  +++        
Sbjct: 13  MCGYDLDGCPVWYDIIGPLDAKGLLFSASKQD-----LLRTKMRECELLLQECAHQTTKL 67

Query: 362 PSGICTIVQINDLKN-SPGPAKRDLRIATNQAVHLLQDNYPEFVARQVFINVPWWYLAFN 420
              + TI  I D +        +    A  + + + ++NYPE + R   +  P  +    
Sbjct: 68  GRKVETITIIYDCEGLGLKHLWKPAVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAY 127

Query: 421 RMISPFLTQRTKSKFVFSGPSKSAETLFKYV 451
            +I PFL++ T+ K +  G +   E L K++
Sbjct: 128 NLIKPFLSEDTRKKIMVLG-ANWKEVLLKHI 157
>d1auaa2 c.13.1.1 (A:97-299) C-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 203 Back     information, alignment and structure
>d1r5la2 c.13.1.1 (A:91-275) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]} Length = 185 Back     information, alignment and structure
>d1olma1 a.5.3.1 (A:1-75) Supernatant protein factor (SPF), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 75 Back     information, alignment and structure
>d1auaa1 a.5.3.1 (A:4-96) N-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 93 Back     information, alignment and structure
>d1r5la1 a.5.3.1 (A:25-90) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]} Length = 66 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query454
d1olma3199 Supernatant protein factor (SPF), middle domain {H 99.95
d1auaa2203 C-terminal domain of phosphatidylinositol transfer 99.94
d1r5la2185 Alpha-tocopherol transfer protein {Human (Homo sap 99.9
d1olma175 Supernatant protein factor (SPF), N-terminal domai 99.1
d1r5la166 Alpha-tocopherol transfer protein {Human (Homo sap 99.02
d1auaa193 N-terminal domain of phosphatidylinositol transfer 99.0
>d1olma3 c.13.1.1 (A:76-274) Supernatant protein factor (SPF), middle domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: Supernatant protein factor (SPF), middle domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.7e-28  Score=225.69  Aligned_cols=142  Identities=23%  Similarity=0.364  Sum_probs=123.2

Q ss_pred             eeeccCCCCCeEEEEecccccccccccccCCChHHHHHHHHHHHHHHHHHHHhhccC----CCCeeEEEEEEeCCCCCCC
Q 012901          305 FMHGVDKEGHPVCYNVFGEFQNKELYHNNFSDDEKRTKFLKWRIQFLEKSIRKLDFS----PSGICTIVQINDLKNSPGP  380 (454)
Q Consensus       305 fl~G~Dk~GrPViy~rlg~~d~k~l~~~tf~d~e~~~~flr~~i~llE~~i~~ld~~----~~gv~~iviIiDLkG~sgl  380 (454)
                      .+||+|++||||+|+++|++|.+++++..     ..+++++++++.+|.+++.+..+    +.++.++++|+||+|++ +
T Consensus        12 ~~~G~Dk~Grpv~~~r~g~~d~~~l~~~~-----~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~v~~~~~I~Dl~g~s-~   85 (199)
T d1olma3          12 GMCGYDLDGCPVWYDIIGPLDAKGLLFSA-----SKQDLLRTKMRECELLLQECAHQTTKLGRKVETITIIYDCEGLG-L   85 (199)
T ss_dssp             EEEEECTTSCEEEEEECTTCCHHHHHTTS-----CHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCCEEEEEECTTCC-G
T ss_pred             ccccCCCCCCEEEEEecccCChHHhhccC-----CHHHHHHHHHHHHHHHHHHHHHHHHhcCCccceEEEEEECCCCc-h
Confidence            37999999999999999999999886543     25789999999999998865432    46678999999999986 3


Q ss_pred             Cch--hHHHHHHHHHHHHHhhcccccceEEEEeCChHHHHHHHHHhhcCCHhhhcceEEeCCCCCHHHHHhhhcc
Q 012901          381 AKR--DLRIATNQAVHLLQDNYPEFVARQVFINVPWWYLAFNRMISPFLTQRTKSKFVFSGPSKSAETLFKYVYL  453 (454)
Q Consensus       381 ~~~--~l~~~iK~il~lLqd~YPErL~kI~IINaP~~f~~lwkiIKpFL~~kTr~KI~fl~~sk~~etLlk~Idp  453 (454)
                      ++.  ..++++++++.++|++||+|++++||||+||+|+++|+++++||+++|++||+|+++ ++.+.|++|||+
T Consensus        86 ~~~~~~~~~~l~~~~~~~q~~YPerl~~i~iiN~P~~f~~~w~ivk~fl~~~t~~KI~~~~~-~~~~~L~~~i~~  159 (199)
T d1olma3          86 KHLWKPAVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKIMVLGA-NWKEVLLKHISP  159 (199)
T ss_dssp             GGGCHHHHHHHHHHHHHHHHHSTTCEEEEEEESCCTTHHHHHHHHGGGSCHHHHHTEEECCT-THHHHHTTTSCG
T ss_pred             hhhccccHHHHHHHHHHHHHHHHHhhhheEEECCCHHHHHHHHHHHHhcCHHhhccEEEeCC-CCHHHHHHhCCH
Confidence            322  136889999999999999999999999999999999999999999999999999985 367899999985
>d1auaa2 c.13.1.1 (A:97-299) C-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1r5la2 c.13.1.1 (A:91-275) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1olma1 a.5.3.1 (A:1-75) Supernatant protein factor (SPF), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1r5la1 a.5.3.1 (A:25-90) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1auaa1 a.5.3.1 (A:4-96) N-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure