Citrus Sinensis ID: 012960
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 452 | 2.2.26 [Sep-21-2011] | |||||||
| P43297 | 462 | Cysteine proteinase RD21a | no | no | 0.842 | 0.824 | 0.493 | 1e-109 | |
| P25776 | 458 | Oryzain alpha chain OS=Or | no | no | 0.845 | 0.834 | 0.482 | 1e-106 | |
| P25777 | 466 | Oryzain beta chain OS=Ory | no | no | 0.827 | 0.802 | 0.457 | 2e-98 | |
| Q7XR52 | 490 | Cysteine protease 1 OS=Or | no | no | 0.794 | 0.732 | 0.488 | 2e-95 | |
| P25251 | 328 | Cysteine proteinase COT44 | N/A | no | 0.688 | 0.948 | 0.509 | 9e-95 | |
| O65493 | 355 | Xylem cysteine proteinase | no | no | 0.716 | 0.912 | 0.501 | 3e-94 | |
| Q9LM66 | 356 | Xylem cysteine proteinase | no | no | 0.716 | 0.910 | 0.497 | 2e-93 | |
| Q94B08 | 376 | Germination-specific cyst | no | no | 0.696 | 0.837 | 0.501 | 2e-92 | |
| Q9LT77 | 362 | Probable cysteine protein | no | no | 0.688 | 0.859 | 0.486 | 9e-91 | |
| P20721 | 346 | Low-temperature-induced c | N/A | no | 0.672 | 0.878 | 0.524 | 8e-90 |
| >sp|P43297|RD21A_ARATH Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1 | Back alignment and function desciption |
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Score = 396 bits (1018), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/405 (49%), Positives = 260/405 (64%), Gaps = 24/405 (5%)
Query: 23 SDINELFETWCKQHGKAYSSEQ--EKQQRLKIFEDNYAFVTQHNNMGNSSFTLSLNAFAD 80
+++ ++E W +HGKA S EK +R +IF+DN FV +HN N S+ L L FAD
Sbjct: 44 AEVMSIYEAWLVKHGKAQSQNSLVEKDRRFEIFKDNLRFVDEHNEK-NLSYRLGLTRFAD 102
Query: 81 LTHQEFKASFLGFSAASIDHDRRRNASVQSPGNLRD-VPASIDWRKKGAVTEVKDQASCG 139
LT+ E+++ +LG A ++ R S++ + D +P SIDWRKKGAV EVKDQ CG
Sbjct: 103 LTNDEYRSKYLG---AKMEKKGERRTSLRYEARVGDELPESIDWRKKGAVAEVKDQGGCG 159
Query: 140 ACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIKNHGID 199
+CWAFS GA+EGIN+IVTG L++LSEQEL+DCD SYN GC GGLMDYA++F+IKN GID
Sbjct: 160 SCWAFSTIGAVEGINQIVTGDLITLSEQELVDCDTSYNEGCNGGLMDYAFEFIIKNGGID 219
Query: 200 TEKDYPYRGQAGQCNKQKVLHFLTSFVLQLNRHIVTIDGYKDVPENNEKQLLQAVVAQPV 259
T+KDYPY+G G C++ ++ N +VTID Y+DVP +E+ L +AV QP+
Sbjct: 220 TDKDYPYKGVDGTCDQ-----------IRKNAKVVTIDSYEDVPTYSEESLKKAVAHQPI 268
Query: 260 SVGICGSERAFQLYSSGIFTGPCSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGY 319
S+ I RAFQLY SGIF G C T LDH V+ VGY +ENG DYWI++NSWG+SWG +GY
Sbjct: 269 SIAIEAGGRAFQLYDSGIFDGSCGTQLDHGVVAVGYGTENGKDYWIVRNSWGKSWGESGY 328
Query: 320 MHMQRNTGNSLGICGINMLASYPTKTGQ------NPPPSPPPGPTRCSLLTYCAAGETCC 373
+ M RN +S G CGI + SYP K G+ PPSP PT+C C TCC
Sbjct: 329 LRMARNIASSSGKCGIAIEPSYPIKNGENPPNPGPSPPSPIKPPTQCDSYYTCPESNTCC 388
Query: 374 CGSSILGICLSWKCCGFSSAVCCSDHRYCCPSNYPICDSVRHQCL 418
C C +W CC +A CC D+ CCP YP+CD + CL
Sbjct: 389 CLFEYGKYCFAWGCCPLEAATCCDDNYSCCPHEYPVCDLDQGTCL 433
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Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 4EC: .EC: 2EC: 2EC: .EC: - |
| >sp|P25776|ORYA_ORYSJ Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2 | Back alignment and function description |
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| >sp|P25777|ORYB_ORYSJ Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q7XR52|CYSP1_ORYSJ Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2 | Back alignment and function description |
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| >sp|P25251|CYSP4_BRANA Cysteine proteinase COT44 (Fragment) OS=Brassica napus PE=2 SV=1 | Back alignment and function description |
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| >sp|O65493|XCP1_ARATH Xylem cysteine proteinase 1 OS=Arabidopsis thaliana GN=XCP1 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9LM66|XCP2_ARATH Xylem cysteine proteinase 2 OS=Arabidopsis thaliana GN=XCP2 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q94B08|GCP1_ARATH Germination-specific cysteine protease 1 OS=Arabidopsis thaliana GN=GCP1 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q9LT77|CPR1_ARATH Probable cysteine proteinase At3g19400 OS=Arabidopsis thaliana GN=At3g19400 PE=2 SV=1 | Back alignment and function description |
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| >sp|P20721|CYSPL_SOLLC Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 452 | ||||||
| 224085750 | 436 | predicted protein [Populus trichocarpa] | 0.962 | 0.997 | 0.682 | 1e-173 | |
| 317106666 | 441 | JHL18I08.3 [Jatropha curcas] | 0.915 | 0.938 | 0.687 | 1e-168 | |
| 449469929 | 431 | PREDICTED: cysteine proteinase RD21a-lik | 0.878 | 0.921 | 0.711 | 1e-161 | |
| 225458143 | 436 | PREDICTED: cysteine proteinase RD21a [Vi | 0.949 | 0.983 | 0.632 | 1e-157 | |
| 18391078 | 437 | xylem bark cysteine peptidase 3 [Arabido | 0.907 | 0.938 | 0.646 | 1e-157 | |
| 255538788 | 422 | cysteine protease, putative [Ricinus com | 0.896 | 0.959 | 0.677 | 1e-157 | |
| 14600257 | 437 | papain-like cysteine peptidase XBCP3 [Ar | 0.907 | 0.938 | 0.643 | 1e-156 | |
| 297843784 | 439 | hypothetical protein ARALYDRAFT_471096 [ | 0.944 | 0.972 | 0.635 | 1e-156 | |
| 2160175 | 416 | Strong similarity to Dianthus cysteine p | 0.845 | 0.918 | 0.661 | 1e-152 | |
| 356509992 | 439 | PREDICTED: oryzain alpha chain-like [Gly | 0.900 | 0.927 | 0.663 | 1e-150 |
| >gi|224085750|ref|XP_002307688.1| predicted protein [Populus trichocarpa] gi|222857137|gb|EEE94684.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 614 bits (1584), Expect = e-173, Method: Compositional matrix adjust.
Identities = 308/451 (68%), Positives = 357/451 (79%), Gaps = 16/451 (3%)
Query: 1 MNSLAFFLLSILLLSSLPLNYCSDINELFETWCKQHGKAYSSEQEKQQRLKIFEDNYAFV 60
MN L F L++L+ P SDI++LFETWCK+HGK+Y+S++E+ RLK+FEDNY FV
Sbjct: 1 MNFLYIFALTLLISVLSPSTSSSDISQLFETWCKEHGKSYTSQEERSHRLKVFEDNYDFV 60
Query: 61 TQHNNMGNSSFTLSLNAFADLTHQEFKASFLGFSAASIDHDRRRNASVQSPGNLRDVPAS 120
T+HN+ GNSS++L+LNAFADLTH EFK S LG SAA ++ R +++ G + D+PAS
Sbjct: 61 TKHNSKGNSSYSLALNAFADLTHHEFKTSRLGLSAAPLNLAHR---NLEITGVVGDIPAS 117
Query: 121 IDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGC 180
IDWR KG VT VKDQ SCGACW+FSATGAIEGINKIVTGSLVSLSEQELI+CD+SYN GC
Sbjct: 118 IDWRNKGVVTNVKDQGSCGACWSFSATGAIEGINKIVTGSLVSLSEQELIECDKSYNDGC 177
Query: 181 GGGLMDYAYQFVIKNHGIDTEKDYPYRGQAGQCNKQKVLHFLTSFVLQLNRHIVTIDGYK 240
GGGLMDYA+QFVI NHGIDTE+DYPYR + G CNK + + R +VTID Y
Sbjct: 178 GGGLMDYAFQFVINNHGIDTEEDYPYRARDGTCNKDR-----------MKRRVVTIDKYV 226
Query: 241 DVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSSGIFTGPCSTSLDHAVLIVGYDSENG 300
DVPENNEKQLLQAV AQPVSVGICGSERAFQ+YS GIFTGPCSTSLDHAVLIVGY SENG
Sbjct: 227 DVPENNEKQLLQAVAAQPVSVGICGSERAFQMYSKGIFTGPCSTSLDHAVLIVGYGSENG 286
Query: 301 VDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTKTGQNPPPSPPPGPTRC 360
VDYWI+KNSWG WGM GYMHMQRN+GNS G+CGINMLASYP KT NPPP PPPGPT+C
Sbjct: 287 VDYWIVKNSWGTGWGMRGYMHMQRNSGNSQGVCGINMLASYPVKTSPNPPPPPPPGPTKC 346
Query: 361 SLLTYCAAGETCCCGSSILGICLSWKCCGFSSAVCCSDHRYCCPSNYPICDSVRHQCLTR 420
+LLTYCAAGETCCC GIC+SWKCCG SAVCC D +CCP +YP+CD+ ++ C R
Sbjct: 347 NLLTYCAAGETCCCARKFFGICISWKCCGLDSAVCCKDRLHCCPHDYPVCDTDKNMCFKR 406
Query: 421 LTGNVTAAEAIEMRGSSWKFGSWSSFIDAWF 451
GN T EAIE + +S KFGSW S +AW
Sbjct: 407 -AGNATRMEAIEGK-TSGKFGSWISLPEAWI 435
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|317106666|dbj|BAJ53169.1| JHL18I08.3 [Jatropha curcas] | Back alignment and taxonomy information |
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| >gi|449469929|ref|XP_004152671.1| PREDICTED: cysteine proteinase RD21a-like [Cucumis sativus] gi|449529596|ref|XP_004171784.1| PREDICTED: cysteine proteinase RD21a-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|225458143|ref|XP_002280937.1| PREDICTED: cysteine proteinase RD21a [Vitis vinifera] gi|302142569|emb|CBI19772.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|18391078|ref|NP_563855.1| xylem bark cysteine peptidase 3 [Arabidopsis thaliana] gi|110741821|dbj|BAE98853.1| papain-like cysteine peptidase XBCP3 [Arabidopsis thaliana] gi|111074448|gb|ABH04597.1| At1g09850 [Arabidopsis thaliana] gi|332190386|gb|AEE28507.1| xylem bark cysteine peptidase 3 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|255538788|ref|XP_002510459.1| cysteine protease, putative [Ricinus communis] gi|223551160|gb|EEF52646.1| cysteine protease, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|14600257|gb|AAK71314.1|AF388175_1 papain-like cysteine peptidase XBCP3 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|297843784|ref|XP_002889773.1| hypothetical protein ARALYDRAFT_471096 [Arabidopsis lyrata subsp. lyrata] gi|297335615|gb|EFH66032.1| hypothetical protein ARALYDRAFT_471096 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|2160175|gb|AAB60738.1| Strong similarity to Dianthus cysteine proteinase (gb|U17135) [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|356509992|ref|XP_003523725.1| PREDICTED: oryzain alpha chain-like [Glycine max] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 452 | ||||||
| TAIR|locus:2024362 | 437 | XBCP3 "xylem bark cysteine pep | 0.862 | 0.892 | 0.653 | 3.4e-148 | |
| TAIR|locus:2825832 | 462 | RD21A "responsive to dehydrati | 0.842 | 0.824 | 0.483 | 2.8e-105 | |
| TAIR|locus:2090614 | 452 | AT3G19390 [Arabidopsis thalian | 0.856 | 0.856 | 0.485 | 5.8e-105 | |
| TAIR|locus:2167821 | 463 | RD21B "esponsive to dehydratio | 0.840 | 0.820 | 0.484 | 2.3e-103 | |
| TAIR|locus:2122113 | 355 | XCP1 "xylem cysteine peptidase | 0.676 | 0.861 | 0.523 | 4.1e-88 | |
| TAIR|locus:2030427 | 356 | XCP2 "xylem cysteine peptidase | 0.679 | 0.862 | 0.510 | 9.9e-87 | |
| TAIR|locus:2090629 | 362 | AT3G19400 [Arabidopsis thalian | 0.688 | 0.859 | 0.486 | 6.2e-85 | |
| TAIR|locus:2117979 | 356 | AT4G23520 [Arabidopsis thalian | 0.679 | 0.862 | 0.495 | 5.8e-82 | |
| TAIR|locus:2128243 | 364 | AT4G11310 [Arabidopsis thalian | 0.674 | 0.837 | 0.487 | 3.8e-78 | |
| TAIR|locus:2128253 | 371 | AT4G11320 [Arabidopsis thalian | 0.674 | 0.822 | 0.481 | 5.5e-77 |
| TAIR|locus:2024362 XBCP3 "xylem bark cysteine peptidase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1447 (514.4 bits), Expect = 3.4e-148, P = 3.4e-148
Identities = 264/404 (65%), Positives = 315/404 (77%)
Query: 24 DINELFETWCKQHGKAYSSEQEKQQRLKIFEDNYAFVTQHNNMGNSSFTLSLNAFADLTH 83
DI+ELF+ WC++HGK Y SE+E+QQR++IF+DN+ FVTQHN + N++++LSLNAFADLTH
Sbjct: 27 DISELFDDWCQKHGKTYGSEEERQQRIQIFKDNHDFVTQHNLITNATYSLSLNAFADLTH 86
Query: 84 QEFKASFLGFSAASIDHDRRRNASVQSPGNLRDVPASIDWRKKGAVTEVKDQASCGACWA 143
EFKAS LG S ++ QS G VP S+DWRKKGAVT VKDQ SCGACW+
Sbjct: 87 HEFKASRLGLSVSAPSVIMASKG--QSLGGSVKVPDSVDWRKKGAVTNVKDQGSCGACWS 144
Query: 144 FSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIKNHGIDTEKD 203
FSATGA+EGIN+IVTG L+SLSEQELIDCD+SYN+GC GGLMDYA++FVIKNHGIDTEKD
Sbjct: 145 FSATGAMEGINQIVTGDLISLSEQELIDCDKSYNAGCNGGLMDYAFEFVIKNHGIDTEKD 204
Query: 204 YPYRGQAGQCNKQKVLHFLTSFVLQLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGI 263
YPY+ + G C K K L + +VTID Y V N+EK L++AV AQPVSVGI
Sbjct: 205 YPYQERDGTCKKDK-----------LKQKVVTIDSYAGVKSNDEKALMEAVAAQPVSVGI 253
Query: 264 CGSERAFQLYSSGIFTGPCSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQ 323
CGSERAFQLYSSGIF+GPCSTSLDHAVLIVGY S+NGVDYWI+KNSWG+SWGM+G+MHMQ
Sbjct: 254 CGSERAFQLYSSGIFSGPCSTSLDHAVLIVGYGSQNGVDYWIVKNSWGKSWGMDGFMHMQ 313
Query: 324 RNTGNSLGICGINMLASYPTKTGQNXXXXXXXXXTRCSLLTYCAAGETCCCGSSILGICL 383
RNT NS G+CGINMLASYP KT N T+C+L TYC++GETCCC + G+C
Sbjct: 314 RNTENSDGVCGINMLASYPIKTHPNPPPPSPPGPTKCNLFTYCSSGETCCCARELFGLCF 373
Query: 384 SWKCCGFSSAVCCSDHRYCCPSNYPICDSVRHQCLTRLTGNVTA 427
SWKCC SAVCC D R+CCP +YP+CD+ R CL + TGN TA
Sbjct: 374 SWKCCEIESAVCCKDGRHCCPHDYPVCDTTRSLCLKK-TGNFTA 416
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| TAIR|locus:2825832 RD21A "responsive to dehydration 21A" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2090614 AT3G19390 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2167821 RD21B "esponsive to dehydration 21B" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2122113 XCP1 "xylem cysteine peptidase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2030427 XCP2 "xylem cysteine peptidase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2090629 AT3G19400 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2117979 AT4G23520 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2128243 AT4G11310 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2128253 AT4G11320 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.4.22 | 0.766 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 452 | |||
| pfam00112 | 213 | pfam00112, Peptidase_C1, Papain family cysteine pr | 1e-116 | |
| cd02248 | 210 | cd02248, Peptidase_C1A, Peptidase C1A subfamily (M | 1e-102 | |
| smart00645 | 175 | smart00645, Pept_C1, Papain family cysteine protea | 8e-81 | |
| PTZ00200 | 448 | PTZ00200, PTZ00200, cysteine proteinase; Provision | 3e-74 | |
| PTZ00021 | 489 | PTZ00021, PTZ00021, falcipain-2; Provisional | 2e-68 | |
| PTZ00203 | 348 | PTZ00203, PTZ00203, cathepsin L protease; Provisio | 3e-60 | |
| cd02619 | 223 | cd02619, Peptidase_C1, C1 Peptidase family (MEROPS | 7e-36 | |
| cd02620 | 236 | cd02620, Peptidase_C1A_CathepsinB, Cathepsin B gro | 7e-30 | |
| cd02621 | 243 | cd02621, Peptidase_C1A_CathepsinC, Cathepsin C; al | 2e-25 | |
| cd02698 | 239 | cd02698, Peptidase_C1A_CathepsinX, Cathepsin X; th | 1e-24 | |
| smart00848 | 57 | smart00848, Inhibitor_I29, Cathepsin propeptide in | 4e-23 | |
| pfam08246 | 58 | pfam08246, Inhibitor_I29, Cathepsin propeptide inh | 2e-22 | |
| COG4870 | 372 | COG4870, COG4870, Cysteine protease [Posttranslati | 6e-18 | |
| smart00277 | 51 | smart00277, GRAN, Granulin | 3e-11 | |
| pfam00396 | 43 | pfam00396, Granulin, Granulin | 3e-10 | |
| PTZ00364 | 548 | PTZ00364, PTZ00364, dipeptidyl-peptidase I precurs | 1e-09 | |
| PTZ00049 | 693 | PTZ00049, PTZ00049, cathepsin C-like protein; Prov | 7e-08 | |
| PTZ00462 | 1004 | PTZ00462, PTZ00462, Serine-repeat antigen protein; | 3e-05 |
| >gnl|CDD|215726 pfam00112, Peptidase_C1, Papain family cysteine protease | Back alignment and domain information |
|---|
Score = 339 bits (872), Expect = e-116
Identities = 121/229 (52%), Positives = 141/229 (61%), Gaps = 18/229 (7%)
Query: 117 VPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSY 176
+P S DWR+KGAVT VKDQ CG+CWAFSA GA+EG I TG LVSLSEQ+L+DCD
Sbjct: 1 LPESFDWREKGAVTPVKDQGQCGSCWAFSAVGALEGRYCIKTGKLVSLSEQQLVDCDTG- 59
Query: 177 NSGCGGGLMDYAYQFVIKNHGIDTEKDYPYRGQAGQCNKQKVLHFLTSFVLQLNRHIVTI 236
N+GC GGL D A++++ KN GI TE DYPY G C +K N I
Sbjct: 60 NNGCNGGLPDNAFEYIKKNGGIVTESDYPYTAHDGTCKFKKS-----------NSKYAKI 108
Query: 237 DGYKDVPENNEKQLLQAVVA-QPVSVGICGSERAFQLYSSGIFTGP-CSTSLDHAVLIVG 294
GY DVP N+E+ L A+ PVSV I E FQLY SG++ CS LDHAVLIVG
Sbjct: 109 KGYGDVPYNDEEALQAALAKNGPVSVAIDAYEDDFQLYKSGVYKHTECSGELDHAVLIVG 168
Query: 295 YDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPT 343
Y +ENGV YWI+KNSWG WG NGY + R CGI ASYP
Sbjct: 169 YGTENGVPYWIVKNSWGTDWGENGYFRIARGVNE----CGIASEASYPI 213
|
Length = 213 |
| >gnl|CDD|239068 cd02248, Peptidase_C1A, Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W) | Back alignment and domain information |
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| >gnl|CDD|214761 smart00645, Pept_C1, Papain family cysteine protease | Back alignment and domain information |
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| >gnl|CDD|240310 PTZ00200, PTZ00200, cysteine proteinase; Provisional | Back alignment and domain information |
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| >gnl|CDD|240232 PTZ00021, PTZ00021, falcipain-2; Provisional | Back alignment and domain information |
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| >gnl|CDD|185513 PTZ00203, PTZ00203, cathepsin L protease; Provisional | Back alignment and domain information |
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| >gnl|CDD|239110 cd02619, Peptidase_C1, C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase) | Back alignment and domain information |
|---|
| >gnl|CDD|239111 cd02620, Peptidase_C1A_CathepsinB, Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag) | Back alignment and domain information |
|---|
| >gnl|CDD|239112 cd02621, Peptidase_C1A_CathepsinC, Cathepsin C; also known as Dipeptidyl Peptidase I (DPPI), an atypical papain-like cysteine peptidase with chloride dependency and dipeptidyl aminopeptidase activity, resulting from its tetrameric structure which limits substrate access | Back alignment and domain information |
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| >gnl|CDD|239149 cd02698, Peptidase_C1A_CathepsinX, Cathepsin X; the only papain-like lysosomal cysteine peptidase exhibiting carboxymonopeptidase activity | Back alignment and domain information |
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| >gnl|CDD|214853 smart00848, Inhibitor_I29, Cathepsin propeptide inhibitor domain (I29) | Back alignment and domain information |
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| >gnl|CDD|219764 pfam08246, Inhibitor_I29, Cathepsin propeptide inhibitor domain (I29) | Back alignment and domain information |
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| >gnl|CDD|227207 COG4870, COG4870, Cysteine protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
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| >gnl|CDD|197621 smart00277, GRAN, Granulin | Back alignment and domain information |
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| >gnl|CDD|215898 pfam00396, Granulin, Granulin | Back alignment and domain information |
|---|
| >gnl|CDD|240381 PTZ00364, PTZ00364, dipeptidyl-peptidase I precursor; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|240244 PTZ00049, PTZ00049, cathepsin C-like protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|185641 PTZ00462, PTZ00462, Serine-repeat antigen protein; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 452 | |||
| KOG1542 | 372 | consensus Cysteine proteinase Cathepsin F [Posttra | 100.0 | |
| PTZ00203 | 348 | cathepsin L protease; Provisional | 100.0 | |
| PTZ00021 | 489 | falcipain-2; Provisional | 100.0 | |
| PTZ00200 | 448 | cysteine proteinase; Provisional | 100.0 | |
| KOG1543 | 325 | consensus Cysteine proteinase Cathepsin L [Posttra | 100.0 | |
| cd02621 | 243 | Peptidase_C1A_CathepsinC Cathepsin C; also known a | 100.0 | |
| cd02698 | 239 | Peptidase_C1A_CathepsinX Cathepsin X; the only pap | 100.0 | |
| cd02248 | 210 | Peptidase_C1A Peptidase C1A subfamily (MEROPS data | 100.0 | |
| cd02620 | 236 | Peptidase_C1A_CathepsinB Cathepsin B group; compos | 100.0 | |
| PF00112 | 219 | Peptidase_C1: Papain family cysteine protease This | 100.0 | |
| PTZ00364 | 548 | dipeptidyl-peptidase I precursor; Provisional | 100.0 | |
| PTZ00049 | 693 | cathepsin C-like protein; Provisional | 100.0 | |
| smart00645 | 174 | Pept_C1 Papain family cysteine protease. | 100.0 | |
| cd02619 | 223 | Peptidase_C1 C1 Peptidase family (MEROPS database | 100.0 | |
| PTZ00462 | 1004 | Serine-repeat antigen protein; Provisional | 100.0 | |
| KOG1544 | 470 | consensus Predicted cysteine proteinase TIN-ag [Ge | 100.0 | |
| KOG4296 | 90 | consensus Epithelin/granulin [Signal transduction | 99.96 | |
| COG4870 | 372 | Cysteine protease [Posttranslational modification, | 99.95 | |
| cd00585 | 437 | Peptidase_C1B Peptidase C1B subfamily (MEROPS data | 99.87 | |
| smart00277 | 51 | GRAN Granulin. | 99.86 | |
| PF00396 | 43 | Granulin: Granulin; InterPro: IPR000118 Metazoan g | 99.69 | |
| PF08246 | 58 | Inhibitor_I29: Cathepsin propeptide inhibitor doma | 99.68 | |
| PF03051 | 438 | Peptidase_C1_2: Peptidase C1-like family This fami | 99.57 | |
| smart00848 | 57 | Inhibitor_I29 Cathepsin propeptide inhibitor domai | 99.52 | |
| COG3579 | 444 | PepC Aminopeptidase C [Amino acid transport and me | 98.5 | |
| PF13529 | 144 | Peptidase_C39_2: Peptidase_C39 like family; PDB: 3 | 96.93 | |
| PF08127 | 41 | Propeptide_C1: Peptidase family C1 propeptide; Int | 95.94 | |
| PF05543 | 175 | Peptidase_C47: Staphopain peptidase C47; InterPro: | 95.55 | |
| PF14399 | 317 | Transpep_BrtH: NlpC/p60-like transpeptidase | 87.61 | |
| COG4990 | 195 | Uncharacterized protein conserved in bacteria [Fun | 81.82 |
| >KOG1542 consensus Cysteine proteinase Cathepsin F [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-80 Score=595.72 Aligned_cols=299 Identities=42% Similarity=0.781 Sum_probs=264.5
Q ss_pred hhHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhccCCCCceEEecccCCccchHHhhhhhcCcCCCcccccc
Q 012960 23 SDINELFETWCKQHGKAYSSEQEKQQRLKIFEDNYAFVTQHNNMGNSSFTLSLNAFADLTHQEFKASFLGFSAASIDHDR 102 (452)
Q Consensus 23 ~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~s~~lg~N~fsDlt~eEf~~~~l~~~~~~~~~~~ 102 (452)
....+.|..|+.+|+|+|.+.+|...|+.||+.|+..++++++....+..+|+|+|||||+|||++++++.+.. .....
T Consensus 65 l~~~~~F~~F~~kf~r~Y~s~eE~~~Rl~iF~~N~~~a~~~q~~d~gsA~yGvtqFSDlT~eEFkk~~l~~~~~-~~~~~ 143 (372)
T KOG1542|consen 65 LGLEDSFKLFTIKFGRSYASREEHAHRLSIFKHNLLRAERLQENDPGSAEYGVTQFSDLTEEEFKKIYLGVKRR-GSKLP 143 (372)
T ss_pred cchHHHHHHHHHhcCcccCcHHHHHHHHHHHHHHHHHHHHhhhcCccccccCccchhhcCHHHHHHHhhccccc-cccCc
Confidence 34588999999999999999999999999999999999999988556999999999999999999999887763 11111
Q ss_pred cCCccccCCCCCCCCCCeeecCCCCCcccccCCCCCcchHHHHHHHHHHHHHHHHhCCccccChHHHhhhcCCCCCCCCC
Q 012960 103 RRNASVQSPGNLRDVPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGG 182 (452)
Q Consensus 103 ~~~~~~~~~~~~~~lP~s~Dwr~~g~vtpVkdQg~cGsCWAfA~~~alE~~~~~~~~~~~~lS~q~lvdc~~~~~~gC~G 182 (452)
....... ......||++||||++|.||||||||+||||||||+++++|++++|++|++++||||||+||+. .++||+|
T Consensus 144 ~~~~~~~-~~~~~~lP~~fDWR~kgaVTpVKnQG~CGSCWAFS~tG~vEga~~i~~g~LvsLSEQeLvDCD~-~d~gC~G 221 (372)
T KOG1542|consen 144 GDAAEAP-IEPGESLPESFDWRDKGAVTPVKNQGMCGSCWAFSTTGAVEGAWAIATGKLVSLSEQELVDCDS-CDNGCNG 221 (372)
T ss_pred cccccCc-CCCCCCCCcccchhccCCccccccCCcCcchhhhhhhhhhhhHHHhhcCcccccchhhhhcccC-cCCcCCC
Confidence 1111111 1345789999999999999999999999999999999999999999999999999999999996 5899999
Q ss_pred CchHHHHHHHHHhCCcCCCCCCCCCCCCC-CccccccccchhhhhhccccceEEeeeeEecCCChHHHHHHHHH-cCCeE
Q 012960 183 GLMDYAYQFVIKNHGIDTEKDYPYRGQAG-QCNKQKVLHFLTSFVLQLNRHIVTIDGYKDVPENNEKQLLQAVV-AQPVS 260 (452)
Q Consensus 183 G~~~~a~~~~~~~~Gi~~e~~yPY~~~~~-~C~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~lk~al~-~gPV~ 260 (452)
|.+..||+|+++.+|+..|++|||++..+ .|...+ ....+.|++|..++ .||++|.+.|. +|||+
T Consensus 222 Gl~~nA~~~~~~~gGL~~E~dYPY~g~~~~~C~~~~------------~~~~v~I~~f~~l~-~nE~~ia~wLv~~GPi~ 288 (372)
T KOG1542|consen 222 GLMDNAFKYIKKAGGLEKEKDYPYTGKKGNQCHFDK------------SKIVVSIKDFSMLS-NNEDQIAAWLVTFGPLS 288 (372)
T ss_pred CChhHHHHHHHHhCCccccccCCccccCCCccccch------------hhceEEEeccEecC-CCHHHHHHHHHhcCCeE
Confidence 99999999988999999999999999888 898876 56778999999998 58888888776 59999
Q ss_pred EEEEcCchhhhccCCceEeC---CCCCC-CCceEEEEEEeecC-CeeEEEEEcCCCCCCCCCcEEEEEecCCCCCCcccc
Q 012960 261 VGICGSERAFQLYSSGIFTG---PCSTS-LDHAVLIVGYDSEN-GVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGI 335 (452)
Q Consensus 261 v~i~~~~~~f~~Y~sGiy~~---~~~~~-~~HaV~IVGyg~~~-g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI 335 (452)
|+|++ ..+|.|.+||+.+ .|+.. ++|||+|||||..+ .++|||||||||++|||+||+|+.||+| .|||
T Consensus 289 vgiNa--~~mQ~YrgGV~~P~~~~Cs~~~~~HaVLlvGyG~~g~~~PYWIVKNSWG~~WGE~GY~~l~RG~N----~CGi 362 (372)
T KOG1542|consen 289 VGINA--KPMQFYRGGVSCPSKYICSPKLLNHAVLLVGYGSSGYEKPYWIVKNSWGTSWGEKGYYKLCRGSN----ACGI 362 (372)
T ss_pred EEEch--HHHHHhcccccCCCcccCCccccCceEEEEeecCCCCCCceEEEECCccccccccceEEEecccc----cccc
Confidence 99996 5799999999977 68765 89999999999987 8999999999999999999999999975 8999
Q ss_pred cccccccc
Q 012960 336 NMLASYPT 343 (452)
Q Consensus 336 ~~~~~~p~ 343 (452)
+.+++-++
T Consensus 363 ~~mvss~~ 370 (372)
T KOG1542|consen 363 ADMVSSAA 370 (372)
T ss_pred ccchhhhh
Confidence 99987554
|
|
| >PTZ00203 cathepsin L protease; Provisional | Back alignment and domain information |
|---|
| >PTZ00021 falcipain-2; Provisional | Back alignment and domain information |
|---|
| >PTZ00200 cysteine proteinase; Provisional | Back alignment and domain information |
|---|
| >KOG1543 consensus Cysteine proteinase Cathepsin L [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd02621 Peptidase_C1A_CathepsinC Cathepsin C; also known as Dipeptidyl Peptidase I (DPPI), an atypical papain-like cysteine peptidase with chloride dependency and dipeptidyl aminopeptidase activity, resulting from its tetrameric structure which limits substrate access | Back alignment and domain information |
|---|
| >cd02698 Peptidase_C1A_CathepsinX Cathepsin X; the only papain-like lysosomal cysteine peptidase exhibiting carboxymonopeptidase activity | Back alignment and domain information |
|---|
| >cd02248 Peptidase_C1A Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W) | Back alignment and domain information |
|---|
| >cd02620 Peptidase_C1A_CathepsinB Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag) | Back alignment and domain information |
|---|
| >PF00112 Peptidase_C1: Papain family cysteine protease This is family C1 in the peptidase classification | Back alignment and domain information |
|---|
| >PTZ00364 dipeptidyl-peptidase I precursor; Provisional | Back alignment and domain information |
|---|
| >PTZ00049 cathepsin C-like protein; Provisional | Back alignment and domain information |
|---|
| >smart00645 Pept_C1 Papain family cysteine protease | Back alignment and domain information |
|---|
| >cd02619 Peptidase_C1 C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase) | Back alignment and domain information |
|---|
| >PTZ00462 Serine-repeat antigen protein; Provisional | Back alignment and domain information |
|---|
| >KOG1544 consensus Predicted cysteine proteinase TIN-ag [General function prediction only] | Back alignment and domain information |
|---|
| >KOG4296 consensus Epithelin/granulin [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG4870 Cysteine protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd00585 Peptidase_C1B Peptidase C1B subfamily (MEROPS database nomenclature); composed of eukaryotic bleomycin hydrolases (BH) and bacterial aminopeptidases C (pepC) | Back alignment and domain information |
|---|
| >smart00277 GRAN Granulin | Back alignment and domain information |
|---|
| >PF00396 Granulin: Granulin; InterPro: IPR000118 Metazoan granulins [] are a family of cysteine-rich peptides of about 6 Kd which may have multiple biological activity | Back alignment and domain information |
|---|
| >PF08246 Inhibitor_I29: Cathepsin propeptide inhibitor domain (I29); InterPro: IPR013201 Peptide proteinase inhibitors can be found as single domain proteins or as single or multiple domains within proteins; these are referred to as either simple or compound inhibitors, respectively | Back alignment and domain information |
|---|
| >PF03051 Peptidase_C1_2: Peptidase C1-like family This family is a subfamily of the Prosite entry; InterPro: IPR004134 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >smart00848 Inhibitor_I29 Cathepsin propeptide inhibitor domain (I29) | Back alignment and domain information |
|---|
| >COG3579 PepC Aminopeptidase C [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PF13529 Peptidase_C39_2: Peptidase_C39 like family; PDB: 3ERV_A | Back alignment and domain information |
|---|
| >PF08127 Propeptide_C1: Peptidase family C1 propeptide; InterPro: IPR012599 This domain is found at the N-terminal of cathepsin B and cathepsin B-like peptidases that belong to MEROPS peptidase subfamily C1A | Back alignment and domain information |
|---|
| >PF05543 Peptidase_C47: Staphopain peptidase C47; InterPro: IPR008750 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >PF14399 Transpep_BrtH: NlpC/p60-like transpeptidase | Back alignment and domain information |
|---|
| >COG4990 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 452 | ||||
| 2fo5_A | 262 | Crystal Structure Of Recombinant Barley Cysteine En | 2e-70 | ||
| 1s4v_A | 229 | The 2.0 A Crystal Structure Of The Kdel-Tailed Cyst | 1e-69 | ||
| 1cqd_A | 221 | The 2.1 Angstrom Structure Of A Cysteine Protease W | 5e-69 | ||
| 3p5w_A | 220 | Actinidin From Actinidia Arguta Planch (Sarusashi) | 1e-68 | ||
| 1aec_A | 218 | Crystal Structure Of Actinidin-E-64 Complex+ Length | 9e-68 | ||
| 3p5u_A | 220 | Actinidin From Actinidia Arguta Planch (Sarusashi) | 1e-67 | ||
| 1pci_A | 322 | Procaricain Length = 322 | 2e-67 | ||
| 1iwd_A | 215 | Proposed Amino Acid Sequence And The 1.63 Angstrom | 7e-66 | ||
| 2act_A | 220 | Crystallographic Refinement Of The Structure Of Act | 6e-65 | ||
| 3tnx_A | 363 | Structure Of The Precursor Of A Thermostable Varian | 4e-64 | ||
| 2pns_A | 208 | 1.9 Angstrom Resolution Crystal Structure Of A Plan | 6e-62 | ||
| 1o0e_A | 208 | 1.9 Angstrom Crystal Structure Of A Plant Cysteine | 7e-62 | ||
| 2c0y_A | 315 | The Crystal Structure Of A Cys25ala Mutant Of Human | 2e-60 | ||
| 7pck_A | 314 | Crystal Structure Of Wild Type Human Procathepsin K | 2e-60 | ||
| 3bcn_A | 209 | Crystal Structure Of A Papain-Like Cysteine Proteas | 3e-59 | ||
| 2o6x_A | 310 | Crystal Structure Of Procathepsin L1 From Fasciola | 1e-58 | ||
| 1cjl_A | 312 | Crystal Structure Of A Cysteine Protease Proform Le | 5e-58 | ||
| 1cs8_A | 316 | Crystal Structure Of Procathepsin L Length = 316 | 6e-58 | ||
| 3u8e_A | 222 | Crystal Structure Of Cysteine Protease From Bulbs O | 2e-57 | ||
| 3qt4_A | 329 | Structure Of Digestive Procathepsin L 3 Of Tenebrio | 4e-57 | ||
| 1yal_A | 218 | Carica Papaya Chymopapain At 1.7 Angstroms Resoluti | 5e-57 | ||
| 1ppo_A | 216 | Determination Of The Structure Of Papaya Protease O | 7e-56 | ||
| 1meg_A | 216 | Crystal Structure Of A Caricain D158e Mutant In Com | 2e-55 | ||
| 2bdz_A | 214 | Mexicain From Jacaratia Mexicana Length = 214 | 2e-55 | ||
| 3f75_A | 224 | Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In | 5e-54 | ||
| 3hwn_A | 258 | Cathepsin L With Az13010160 Length = 258 | 2e-53 | ||
| 2b1m_A | 246 | Crystal Structure Of A Papain-Fold Protein Without | 8e-53 | ||
| 3h7d_A | 215 | The Crystal Structure Of The Cathepsin K Variant M5 | 2e-51 | ||
| 3ioq_A | 213 | Crystal Structure Of The Carica Candamarcensis Cyst | 3e-51 | ||
| 2f7d_A | 215 | A Mutant Rabbit Cathepsin K With A Nitrile Inhibito | 8e-51 | ||
| 1u9v_A | 217 | Crystal Structure Of The Cysteine Protease Human Ca | 1e-50 | ||
| 1mem_A | 215 | Crystal Structure Of Cathepsin K Complexed With A P | 1e-50 | ||
| 1snk_A | 214 | Cathepsin K Complexed With Carbamate Derivatized No | 1e-50 | ||
| 1vsn_A | 215 | Crystal Structure Of A Potent Small Molecule Inhibi | 1e-50 | ||
| 2f1g_A | 220 | Cathepsin S In Complex With Non-Covalent 2-(Benzoxa | 1e-50 | ||
| 1ms6_A | 222 | Dipeptide Nitrile Inhibitor Bound To Cathepsin S. L | 3e-50 | ||
| 3n3g_A | 217 | 4-(3-Trifluoromethylphenyl)-Pyrimidine-2-Carbonitri | 3e-50 | ||
| 3ovx_A | 218 | Cathepsin S In Complex With A Covalent Inhibitor Wi | 3e-50 | ||
| 2g6d_A | 217 | Human Cathepsin S Mutant With Vinyl Sulfone Inhibit | 4e-50 | ||
| 2fq9_A | 225 | Cathepsin S With Nitrile Inhibitor Length = 225 | 4e-50 | ||
| 2fye_A | 217 | Mutant Human Cathepsin S With Irreversible Inhibito | 5e-50 | ||
| 1khp_A | 212 | Monoclinic Form Of Papain/zlfg-dam Covalent Complex | 6e-50 | ||
| 3ovz_A | 213 | Cathepsin K In Complex With A Covalent Inhibitor Wi | 6e-50 | ||
| 1npz_A | 217 | Crystal Structures Of Cathepsin S Inhibitor Complex | 6e-50 | ||
| 1pip_A | 212 | Crystal Structure Of Papain-Succinyl-Gln-Val-Val-Al | 1e-49 | ||
| 3qj3_A | 331 | Structure Of Digestive Procathepsin L2 Proteinase F | 2e-49 | ||
| 1ppp_A | 212 | Crystal Structure Of Papain-E64-C Complex. Binding | 3e-49 | ||
| 3kwn_A | 219 | Cathepsin S In Complex With Thioether Acetamide P3 | 3e-49 | ||
| 3iej_A | 222 | Pyrazole-Based Cathepsin S Inhibitors With Arylalky | 3e-49 | ||
| 3mpe_A | 220 | Crystal Structure Of Human Cathepsin-S C25s Mutant | 3e-49 | ||
| 1glo_A | 217 | Crystal Structure Of Cys25ser Mutant Of Human Cathe | 4e-49 | ||
| 3ima_A | 212 | Complex Strcuture Of Tarocystatin And Papain Length | 7e-49 | ||
| 2cio_A | 212 | The High Resolution X-Ray Structure Of Papain Compl | 7e-49 | ||
| 1stf_E | 212 | The Refined 2.4 Angstroms X-Ray Crystal Structure O | 2e-48 | ||
| 3of8_A | 221 | Structural Basis For Reversible And Irreversible In | 2e-48 | ||
| 3h89_A | 220 | A Combined Crystallographic And Molecular Dynamics | 4e-48 | ||
| 3hha_A | 220 | Crystal Structure Of Cathepsin L In Complex With Az | 4e-48 | ||
| 2nqd_B | 221 | Crystal Structure Of Cysteine Protease Inhibitor, C | 1e-47 | ||
| 3iv2_A | 220 | Crystal Structure Of Mature Apo-Cathepsin L C25a Mu | 2e-47 | ||
| 3bc3_A | 220 | Exploring Inhibitor Binding At The S Subsites Of Ca | 4e-47 | ||
| 3kse_A | 220 | Unreduced Cathepsin L In Complex With Stefin A Leng | 4e-47 | ||
| 1fh0_A | 221 | Crystal Structure Of Human Cathepsin V Complexed Wi | 7e-47 | ||
| 1gec_E | 216 | Glycyl Endopeptidase-complex With Benzyloxycarbonyl | 8e-47 | ||
| 3h6s_A | 221 | Strucure Of Clitocypin - Cathepsin V Complex Length | 6e-46 | ||
| 2vhs_A | 217 | Cathsilicatein, A Chimera Length = 217 | 4e-45 | ||
| 8pch_A | 220 | Crystal Structure Of Porcine Cathepsin H Determined | 7e-44 | ||
| 2p7u_A | 215 | The Crystal Structure Of Rhodesain, The Major Cyste | 7e-40 | ||
| 1aim_A | 215 | Cruzain Inhibited By Benzoyl-Tyrosine-Alanine-Fluor | 1e-36 | ||
| 1ewp_A | 215 | Cruzain Bound To Mor-Leu-Hpq Length = 215 | 2e-36 | ||
| 1icf_A | 175 | Crystal Structure Of Mhc Class Ii Associated P41 Ii | 5e-36 | ||
| 3iut_A | 221 | The Crystal Structure Of Cruzain In Complex With A | 6e-36 | ||
| 3hd3_A | 215 | High Resolution Crystal Structure Of Cruzain Bound | 6e-36 | ||
| 1mhw_A | 175 | Design Of Non-covalent Inhibitors Of Human Cathepsi | 5e-35 | ||
| 1yvb_A | 241 | The Plasmodium Falciparum Cysteine Protease Falcipa | 4e-34 | ||
| 3pnr_A | 240 | Structure Of Pbicp-C In Complex With Falcipain-2 Le | 3e-33 | ||
| 1m6d_A | 214 | Crystal Structure Of Human Cathepsin F Length = 214 | 5e-32 | ||
| 3bpm_A | 243 | Crystal Structure Of Falcipain-3 With Its Inhibitor | 2e-31 | ||
| 1xkg_A | 312 | Crystal Structure Of The Major House Dust Mite Alle | 2e-25 | ||
| 3d6s_A | 223 | Crystal Structure Of Mite Allergen Der F 1 Length = | 1e-24 | ||
| 3pdf_A | 441 | Discovery Of Novel Cyanamide-Based Inhibitors Of Ca | 5e-21 | ||
| 3rvw_A | 222 | Crystal Structure Of Der P 1 Complexed With Fab 4c1 | 6e-21 | ||
| 2as8_A | 222 | Crystal Structure Of Mature And Fully Active Der P | 6e-21 | ||
| 3f5v_A | 222 | C2 Crystal Form Of Mite Allergen Der P 1 Length = 2 | 8e-20 | ||
| 1jqp_A | 438 | Dipeptidyl Peptidase I (Cathepsin C), A Tetrameric | 1e-19 | ||
| 1deu_A | 277 | Crystal Structure Of Human Procathepsin X: A Cystei | 5e-18 | ||
| 3qsd_A | 254 | Structure Of Cathepsin B1 From Schistosoma Mansoni | 5e-18 | ||
| 1ef7_A | 242 | Crystal Structure Of Human Cathepsin X Length = 242 | 2e-17 | ||
| 1pbh_A | 317 | Crystal Structure Of Human Recombinant Procathepsin | 2e-15 | ||
| 3k9m_A | 254 | Cathepsin B In Complex With Stefin A Length = 254 | 2e-15 | ||
| 3ai8_B | 256 | Cathepsin B In Complex With The Nitroxoline Length | 2e-15 | ||
| 1gmy_A | 261 | Cathepsin B Complexed With Dipeptidyl Nitrile Inhib | 2e-15 | ||
| 1cpj_A | 260 | Crystal Structures Of Recombinant Rat Cathepsin B A | 4e-14 | ||
| 1cte_A | 254 | Crystal Structures Of Recombinant Rat Cathepsin B A | 6e-14 | ||
| 3cbj_A | 266 | Chagasin-cathepsin B Complex Length = 266 | 6e-14 | ||
| 4hwy_A | 340 | Trypanosoma Brucei Procathepsin B Solved From 40 Fs | 2e-13 | ||
| 3hhi_A | 325 | Crystal Structure Of Cathepsin B From T. Brucei In | 3e-13 | ||
| 3mor_A | 317 | Crystal Structure Of Cathepsin B From Trypanosoma B | 4e-13 | ||
| 1mir_A | 322 | Rat Procathepsin B Length = 322 | 8e-13 | ||
| 1k3b_C | 69 | Crystal Structure Of Human Dipeptidyl Peptidase I ( | 2e-10 | ||
| 1ito_A | 256 | Crystal Structure Analysis Of Bovine Spleen Catheps | 2e-10 | ||
| 1qdq_A | 253 | X-Ray Crystal Structure Of Bovine Cathepsin B-Ca074 | 2e-10 | ||
| 3f75_P | 106 | Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In | 1e-09 | ||
| 1k3b_B | 164 | Crystal Structure Of Human Dipeptidyl Peptidase I ( | 8e-09 | ||
| 1sp4_B | 205 | Crystal Structure Of Ns-134 In Complex With Bovine | 6e-08 | ||
| 1huc_B | 205 | The Refined 2.15 Angstroms X-Ray Crystal Structure | 3e-07 | ||
| 1icf_B | 42 | Crystal Structure Of Mhc Class Ii Associated P41 Ii | 1e-06 | ||
| 2wbf_X | 265 | Crystal Structure Analysis Of Sera5e From Plasmodiu | 4e-05 | ||
| 3ch2_X | 265 | Crystal Structure Analysis Of Sera5e From Plasmodiu | 5e-05 | ||
| 2jye_A | 72 | Human Granulin A Length = 72 | 9e-04 |
| >pdb|2FO5|A Chain A, Crystal Structure Of Recombinant Barley Cysteine Endoprotease B Isoform 2 (Ep-B2) In Complex With Leupeptin Length = 262 | Back alignment and structure |
|
| >pdb|1S4V|A Chain A, The 2.0 A Crystal Structure Of The Kdel-Tailed Cysteine Endopeptidase Functioning In Programmed Cell Death Of Ricinus Communis Endosperm Length = 229 | Back alignment and structure |
| >pdb|1CQD|A Chain A, The 2.1 Angstrom Structure Of A Cysteine Protease With Proline Specificity From Ginger Rhizome, Zingiber Officinale Length = 221 | Back alignment and structure |
| >pdb|3P5W|A Chain A, Actinidin From Actinidia Arguta Planch (Sarusashi) Length = 220 | Back alignment and structure |
| >pdb|1AEC|A Chain A, Crystal Structure Of Actinidin-E-64 Complex+ Length = 218 | Back alignment and structure |
| >pdb|3P5U|A Chain A, Actinidin From Actinidia Arguta Planch (Sarusashi) Length = 220 | Back alignment and structure |
| >pdb|1PCI|A Chain A, Procaricain Length = 322 | Back alignment and structure |
| >pdb|1IWD|A Chain A, Proposed Amino Acid Sequence And The 1.63 Angstrom X-ray Crystal Structure Of A Plant Cysteine Protease Ervatamin B: Insight Into The Structural Basis Of Its Stability And Substrate Specificity Length = 215 | Back alignment and structure |
| >pdb|2ACT|A Chain A, Crystallographic Refinement Of The Structure Of Actinidin At 1.7 Angstroms Resolution By Fast Fourier Least-Squares Methods Length = 220 | Back alignment and structure |
| >pdb|3TNX|A Chain A, Structure Of The Precursor Of A Thermostable Variant Of Papain At 2.6 Angstroem Resolution Length = 363 | Back alignment and structure |
| >pdb|2PNS|A Chain A, 1.9 Angstrom Resolution Crystal Structure Of A Plant Cysteine Protease Ervatamin-C Refinement With Cdna Derived Amino Acid Sequence Length = 208 | Back alignment and structure |
| >pdb|1O0E|A Chain A, 1.9 Angstrom Crystal Structure Of A Plant Cysteine Protease Ervatamin C Length = 208 | Back alignment and structure |
| >pdb|2C0Y|A Chain A, The Crystal Structure Of A Cys25ala Mutant Of Human Procathepsin S Length = 315 | Back alignment and structure |
| >pdb|7PCK|A Chain A, Crystal Structure Of Wild Type Human Procathepsin K Length = 314 | Back alignment and structure |
| >pdb|3BCN|A Chain A, Crystal Structure Of A Papain-Like Cysteine Protease Ervatamin-A Complexed With Irreversible Inhibitor E-64 Length = 209 | Back alignment and structure |
| >pdb|2O6X|A Chain A, Crystal Structure Of Procathepsin L1 From Fasciola Hepatica Length = 310 | Back alignment and structure |
| >pdb|1CJL|A Chain A, Crystal Structure Of A Cysteine Protease Proform Length = 312 | Back alignment and structure |
| >pdb|1CS8|A Chain A, Crystal Structure Of Procathepsin L Length = 316 | Back alignment and structure |
| >pdb|3U8E|A Chain A, Crystal Structure Of Cysteine Protease From Bulbs Of Crocus Sativus At 1.3 A Resolution Length = 222 | Back alignment and structure |
| >pdb|3QT4|A Chain A, Structure Of Digestive Procathepsin L 3 Of Tenebrio Molitor Larval Midgut Length = 329 | Back alignment and structure |
| >pdb|1YAL|A Chain A, Carica Papaya Chymopapain At 1.7 Angstroms Resolution Length = 218 | Back alignment and structure |
| >pdb|1PPO|A Chain A, Determination Of The Structure Of Papaya Protease Omega Length = 216 | Back alignment and structure |
| >pdb|1MEG|A Chain A, Crystal Structure Of A Caricain D158e Mutant In Complex With E-64 Length = 216 | Back alignment and structure |
| >pdb|2BDZ|A Chain A, Mexicain From Jacaratia Mexicana Length = 214 | Back alignment and structure |
| >pdb|3F75|A Chain A, Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In Complex With Its Propeptide Length = 224 | Back alignment and structure |
| >pdb|3HWN|A Chain A, Cathepsin L With Az13010160 Length = 258 | Back alignment and structure |
| >pdb|2B1M|A Chain A, Crystal Structure Of A Papain-Fold Protein Without The Catalytic Cysteine From Seeds Of Pachyrhizus Erosus Length = 246 | Back alignment and structure |
| >pdb|3H7D|A Chain A, The Crystal Structure Of The Cathepsin K Variant M5 In Compl Chondroitin-4-Sulfate Length = 215 | Back alignment and structure |
| >pdb|3IOQ|A Chain A, Crystal Structure Of The Carica Candamarcensis Cysteine Protease Cms1ms2 In Complex With E-64 Length = 213 | Back alignment and structure |
| >pdb|2F7D|A Chain A, A Mutant Rabbit Cathepsin K With A Nitrile Inhibitor Length = 215 | Back alignment and structure |
| >pdb|1U9V|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin K In Complex With The Covalent Inhibitor Nvp-Abe854 Length = 217 | Back alignment and structure |
| >pdb|1MEM|A Chain A, Crystal Structure Of Cathepsin K Complexed With A Potent Vinyl Sulfone Inhibitor Length = 215 | Back alignment and structure |
| >pdb|1SNK|A Chain A, Cathepsin K Complexed With Carbamate Derivatized Norleucine Aldehyde Length = 214 | Back alignment and structure |
| >pdb|1VSN|A Chain A, Crystal Structure Of A Potent Small Molecule Inhibitor Bound To Cathepsin K Length = 215 | Back alignment and structure |
| >pdb|2F1G|A Chain A, Cathepsin S In Complex With Non-Covalent 2-(Benzoxazol-2-Ylamino)- Acetamide Length = 220 | Back alignment and structure |
| >pdb|1MS6|A Chain A, Dipeptide Nitrile Inhibitor Bound To Cathepsin S. Length = 222 | Back alignment and structure |
| >pdb|3N3G|A Chain A, 4-(3-Trifluoromethylphenyl)-Pyrimidine-2-Carbonitrile As Cathepsin S Inhibitors: N3, Not N1 Is Critically Important Length = 217 | Back alignment and structure |
| >pdb|3OVX|A Chain A, Cathepsin S In Complex With A Covalent Inhibitor With An Aldehyde Warhead Length = 218 | Back alignment and structure |
| >pdb|2G6D|A Chain A, Human Cathepsin S Mutant With Vinyl Sulfone Inhibitor Cra- 14009 Length = 217 | Back alignment and structure |
| >pdb|2FQ9|A Chain A, Cathepsin S With Nitrile Inhibitor Length = 225 | Back alignment and structure |
| >pdb|2FYE|A Chain A, Mutant Human Cathepsin S With Irreversible Inhibitor Cra- 14013 Length = 217 | Back alignment and structure |
| >pdb|1KHP|A Chain A, Monoclinic Form Of Papain/zlfg-dam Covalent Complex Length = 212 | Back alignment and structure |
| >pdb|3OVZ|A Chain A, Cathepsin K In Complex With A Covalent Inhibitor With A Ketoamide Warhead Length = 213 | Back alignment and structure |
| >pdb|1NPZ|A Chain A, Crystal Structures Of Cathepsin S Inhibitor Complexes Length = 217 | Back alignment and structure |
| >pdb|1PIP|A Chain A, Crystal Structure Of Papain-Succinyl-Gln-Val-Val-Ala-Ala-P- Nitroanilide Complex At 1.7 Angstroms Resolution: Noncovalent Binding Mode Of A Common Sequence Of Endogenous Thiol Protease Inhibitors Length = 212 | Back alignment and structure |
| >pdb|3QJ3|A Chain A, Structure Of Digestive Procathepsin L2 Proteinase From Tenebrio Molitor Larval Midgut Length = 331 | Back alignment and structure |
| >pdb|1PPP|A Chain A, Crystal Structure Of Papain-E64-C Complex. Binding Diversity Of E64-C To Papain S2 And S3 Subsites Length = 212 | Back alignment and structure |
| >pdb|3KWN|A Chain A, Cathepsin S In Complex With Thioether Acetamide P3 Inhibitor Length = 219 | Back alignment and structure |
| >pdb|3IEJ|A Chain A, Pyrazole-Based Cathepsin S Inhibitors With Arylalkynes As P1 Binding Elements Length = 222 | Back alignment and structure |
| >pdb|3MPE|A Chain A, Crystal Structure Of Human Cathepsin-S C25s Mutant With Bound Drug Length = 220 | Back alignment and structure |
| >pdb|1GLO|A Chain A, Crystal Structure Of Cys25ser Mutant Of Human Cathepsin S Length = 217 | Back alignment and structure |
| >pdb|3IMA|A Chain A, Complex Strcuture Of Tarocystatin And Papain Length = 212 | Back alignment and structure |
| >pdb|2CIO|A Chain A, The High Resolution X-Ray Structure Of Papain Complexed With Fragments Of The Trypanosoma Brucei Cysteine Protease Inhibitor Icp Length = 212 | Back alignment and structure |
| >pdb|1STF|E Chain E, The Refined 2.4 Angstroms X-Ray Crystal Structure Of Recombinant Human Stefin B In Complex With The Cysteine Proteinase Papain: A Novel Type Of Proteinase Inhibitor Interaction Length = 212 | Back alignment and structure |
| >pdb|3OF8|A Chain A, Structural Basis For Reversible And Irreversible Inhibition Of Human Cathepsin L By Their Respective Dipeptidyl Glyoxal And Diazomethylketone Inhibitors Length = 221 | Back alignment and structure |
| >pdb|3H89|A Chain A, A Combined Crystallographic And Molecular Dynamics Study Of Cathepsin-L Retro-Binding Inhibitors(Compound 4) Length = 220 | Back alignment and structure |
| >pdb|3HHA|A Chain A, Crystal Structure Of Cathepsin L In Complex With Az12878478 Length = 220 | Back alignment and structure |
| >pdb|2NQD|B Chain B, Crystal Structure Of Cysteine Protease Inhibitor, Chagasin, In Complex With Human Cathepsin L Length = 221 | Back alignment and structure |
| >pdb|3IV2|A Chain A, Crystal Structure Of Mature Apo-Cathepsin L C25a Mutant Length = 220 | Back alignment and structure |
| >pdb|3BC3|A Chain A, Exploring Inhibitor Binding At The S Subsites Of Cathepsin L Length = 220 | Back alignment and structure |
| >pdb|3KSE|A Chain A, Unreduced Cathepsin L In Complex With Stefin A Length = 220 | Back alignment and structure |
| >pdb|1FH0|A Chain A, Crystal Structure Of Human Cathepsin V Complexed With An Irreversible Vinyl Sulfone Inhibitor Length = 221 | Back alignment and structure |
| >pdb|1GEC|E Chain E, Glycyl Endopeptidase-complex With Benzyloxycarbonyl-leucine-valine- Glycine-methylene Covalently Bound To Cysteine 25 Length = 216 | Back alignment and structure |
| >pdb|3H6S|A Chain A, Strucure Of Clitocypin - Cathepsin V Complex Length = 221 | Back alignment and structure |
| >pdb|2VHS|A Chain A, Cathsilicatein, A Chimera Length = 217 | Back alignment and structure |
| >pdb|8PCH|A Chain A, Crystal Structure Of Porcine Cathepsin H Determined At 2.1 Angstrom Resolution: Location Of The Mini-Chain C-Terminal Carboxyl Group Defines Cathepsin H Aminopeptidase Function Length = 220 | Back alignment and structure |
| >pdb|2P7U|A Chain A, The Crystal Structure Of Rhodesain, The Major Cysteine Protease Of T. Brucei Rhodesiense, Bound To Inhibitor K777 Length = 215 | Back alignment and structure |
| >pdb|1AIM|A Chain A, Cruzain Inhibited By Benzoyl-Tyrosine-Alanine-Fluoromethylketone Length = 215 | Back alignment and structure |
| >pdb|1EWP|A Chain A, Cruzain Bound To Mor-Leu-Hpq Length = 215 | Back alignment and structure |
| >pdb|1ICF|A Chain A, Crystal Structure Of Mhc Class Ii Associated P41 Ii Fragment In Complex With Cathepsin L Length = 175 | Back alignment and structure |
| >pdb|3IUT|A Chain A, The Crystal Structure Of Cruzain In Complex With A Tetrafluorophenoxymethyl Ketone Inhibitor Length = 221 | Back alignment and structure |
| >pdb|3HD3|A Chain A, High Resolution Crystal Structure Of Cruzain Bound To The Vinyl Sulfone Inhibitor Smdc-256047 Length = 215 | Back alignment and structure |
| >pdb|1MHW|A Chain A, Design Of Non-covalent Inhibitors Of Human Cathepsin L. From The 96- Residue Proregion To Optimized Tripeptides Length = 175 | Back alignment and structure |
| >pdb|1YVB|A Chain A, The Plasmodium Falciparum Cysteine Protease Falcipain-2 Length = 241 | Back alignment and structure |
| >pdb|3PNR|A Chain A, Structure Of Pbicp-C In Complex With Falcipain-2 Length = 240 | Back alignment and structure |
| >pdb|1M6D|A Chain A, Crystal Structure Of Human Cathepsin F Length = 214 | Back alignment and structure |
| >pdb|3BPM|A Chain A, Crystal Structure Of Falcipain-3 With Its Inhibitor, Leupeptin Length = 243 | Back alignment and structure |
| >pdb|1XKG|A Chain A, Crystal Structure Of The Major House Dust Mite Allergen Der P 1 In Its Pro Form At 1.61 A Resolution Length = 312 | Back alignment and structure |
| >pdb|3D6S|A Chain A, Crystal Structure Of Mite Allergen Der F 1 Length = 223 | Back alignment and structure |
| >pdb|3PDF|A Chain A, Discovery Of Novel Cyanamide-Based Inhibitors Of Cathepsin C Length = 441 | Back alignment and structure |
| >pdb|3RVW|A Chain A, Crystal Structure Of Der P 1 Complexed With Fab 4c1 Length = 222 | Back alignment and structure |
| >pdb|2AS8|A Chain A, Crystal Structure Of Mature And Fully Active Der P 1 Allergen Length = 222 | Back alignment and structure |
| >pdb|3F5V|A Chain A, C2 Crystal Form Of Mite Allergen Der P 1 Length = 222 | Back alignment and structure |
| >pdb|1JQP|A Chain A, Dipeptidyl Peptidase I (Cathepsin C), A Tetrameric Cysteine Protease Of The Papain Family Length = 438 | Back alignment and structure |
| >pdb|1DEU|A Chain A, Crystal Structure Of Human Procathepsin X: A Cysteine Protease With The Proregion Covalently Linked To The Active Site Cysteine Length = 277 | Back alignment and structure |
| >pdb|3QSD|A Chain A, Structure Of Cathepsin B1 From Schistosoma Mansoni In Complex With Ca074 Inhibitor Length = 254 | Back alignment and structure |
| >pdb|1EF7|A Chain A, Crystal Structure Of Human Cathepsin X Length = 242 | Back alignment and structure |
| >pdb|1PBH|A Chain A, Crystal Structure Of Human Recombinant Procathepsin B At 3.2 Angstrom Resolution Length = 317 | Back alignment and structure |
| >pdb|3K9M|A Chain A, Cathepsin B In Complex With Stefin A Length = 254 | Back alignment and structure |
| >pdb|3AI8|B Chain B, Cathepsin B In Complex With The Nitroxoline Length = 256 | Back alignment and structure |
| >pdb|1GMY|A Chain A, Cathepsin B Complexed With Dipeptidyl Nitrile Inhibitor Length = 261 | Back alignment and structure |
| >pdb|1CPJ|A Chain A, Crystal Structures Of Recombinant Rat Cathepsin B And A Cathepsin B-Inhibitor Complex: Implications For Structure- Based Inhibitor Design Length = 260 | Back alignment and structure |
| >pdb|1CTE|A Chain A, Crystal Structures Of Recombinant Rat Cathepsin B And A Cathepsin B-Inhibitor Complex: Implications For Structure- Based Inhibitor Design Length = 254 | Back alignment and structure |
| >pdb|3CBJ|A Chain A, Chagasin-cathepsin B Complex Length = 266 | Back alignment and structure |
| >pdb|4HWY|A Chain A, Trypanosoma Brucei Procathepsin B Solved From 40 Fs Free-electron Laser Pulse Data By Serial Femtosecond X-ray Crystallography Length = 340 | Back alignment and structure |
| >pdb|3HHI|A Chain A, Crystal Structure Of Cathepsin B From T. Brucei In Complex With Ca074 Length = 325 | Back alignment and structure |
| >pdb|3MOR|A Chain A, Crystal Structure Of Cathepsin B From Trypanosoma Brucei Length = 317 | Back alignment and structure |
| >pdb|1MIR|A Chain A, Rat Procathepsin B Length = 322 | Back alignment and structure |
| >pdb|1K3B|C Chain C, Crystal Structure Of Human Dipeptidyl Peptidase I (Cathepsin C): Exclusion Domain Added To An Endopeptidase Framework Creates The Machine For Activation Of Granular Serine Proteases Length = 69 | Back alignment and structure |
| >pdb|1ITO|A Chain A, Crystal Structure Analysis Of Bovine Spleen Cathepsin B- E64c Complex Length = 256 | Back alignment and structure |
| >pdb|1QDQ|A Chain A, X-Ray Crystal Structure Of Bovine Cathepsin B-Ca074 Complex Length = 253 | Back alignment and structure |
| >pdb|3F75|P Chain P, Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In Complex With Its Propeptide Length = 106 | Back alignment and structure |
| >pdb|1K3B|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase I (Cathepsin C): Exclusion Domain Added To An Endopeptidase Framework Creates The Machine For Activation Of Granular Serine Proteases Length = 164 | Back alignment and structure |
| >pdb|1SP4|B Chain B, Crystal Structure Of Ns-134 In Complex With Bovine Cathepsin B: A Two Headed Epoxysuccinyl Inhibitor Extends Along The Whole Active Site Cleft Length = 205 | Back alignment and structure |
| >pdb|1HUC|B Chain B, The Refined 2.15 Angstroms X-Ray Crystal Structure Of Human Liver Cathepsin B: The Structural Basis For Its Specificity Length = 205 | Back alignment and structure |
| >pdb|1ICF|B Chain B, Crystal Structure Of Mhc Class Ii Associated P41 Ii Fragment In Complex With Cathepsin L Length = 42 | Back alignment and structure |
| >pdb|2WBF|X Chain X, Crystal Structure Analysis Of Sera5e From Plasmodium Falciparum With Loop 690-700 Ordered Length = 265 | Back alignment and structure |
| >pdb|3CH2|X Chain X, Crystal Structure Analysis Of Sera5e From Plasmodium Falciparum Length = 265 | Back alignment and structure |
| >pdb|2JYE|A Chain A, Human Granulin A Length = 72 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1 Length = 322 | Back alignment and structure |
|---|
Score = 504 bits (1300), Expect = e-180
Identities = 143/336 (42%), Positives = 190/336 (56%), Gaps = 16/336 (4%)
Query: 9 LSILLLSSLPLNYCSDINELFETWCKQHGKAYSSEQEKQQRLKIFEDNYAFVTQHNNMGN 68
SI+ S L + +LF +W H K Y + EK R +IF+DN ++ + N N
Sbjct: 2 FSIVGYSQDDLTSTERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETN-KKN 60
Query: 69 SSFTLSLNAFADLTHQEFKASFLGFSAASIDHDRRRNASVQSPGNLRDVPASIDWRKKGA 128
+S+ L LN FADL++ EF ++G + + ++ ++P ++DWRKKGA
Sbjct: 61 NSYWLGLNEFADLSNDEFNEKYVGSLIDA--TIEQSYDEEFINEDIVNLPENVDWRKKGA 118
Query: 129 VTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYA 188
VT V+ Q SCG+CWAFSA +EGINKI TG LV LSEQEL+DC+R + GC GG YA
Sbjct: 119 VTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCERR-SHGCKGGYPPYA 177
Query: 189 YQFVIKNHGIDTEKDYPYRGQAGQCNKQKVLHFLTSFVLQLNRHIVTIDGYKDVPENNEK 248
++V KN GI YPY+ + G C ++V IV G V NNE
Sbjct: 178 LEYVAKN-GIHLRSKYPYKAKQGTCRAKQV-----------GGPIVKTSGVGRVQPNNEG 225
Query: 249 QLLQAVVAQPVSVGICGSERAFQLYSSGIFTGPCSTSLDHAVLIVGYDSENGVDYWIIKN 308
LL A+ QPVSV + R FQLY GIF GPC T +D AV VGY G Y +IKN
Sbjct: 226 NLLNAIAKQPVSVVVESKGRPFQLYKGGIFEGPCGTKVDGAVTAVGYGKSGGKGYILIKN 285
Query: 309 SWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 344
SWG +WG GY+ ++R GNS G+CG+ + YPTK
Sbjct: 286 SWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPTK 321
|
| >2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens} Length = 315 | Back alignment and structure |
|---|
| >1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A Length = 314 | Back alignment and structure |
|---|
| >3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} Length = 331 | Back alignment and structure |
|---|
| >2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica} Length = 310 | Back alignment and structure |
|---|
| >3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor} Length = 329 | Back alignment and structure |
|---|
| >1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A* Length = 316 | Back alignment and structure |
|---|
| >1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1 Length = 312 | Back alignment and structure |
|---|
| >2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare} Length = 262 | Back alignment and structure |
|---|
| >1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1 Length = 221 | Back alignment and structure |
|---|
| >1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1 Length = 229 | Back alignment and structure |
|---|
| >1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A* Length = 216 | Back alignment and structure |
|---|
| >1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1 Length = 215 | Back alignment and structure |
|---|
| >2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana} Length = 214 | Back alignment and structure |
|---|
| >1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E* Length = 218 | Back alignment and structure |
|---|
| >3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} Length = 213 | Back alignment and structure |
|---|
| >2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ... Length = 212 | Back alignment and structure |
|---|
| >2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A* Length = 246 | Back alignment and structure |
|---|
| >3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Length = 224 | Back alignment and structure |
|---|
| >2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A Length = 241 | Back alignment and structure |
|---|
| >3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A* Length = 243 | Back alignment and structure |
|---|
| >3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ... Length = 218 | Back alignment and structure |
|---|
| >3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ... Length = 215 | Back alignment and structure |
|---|
| >8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A* Length = 220 | Back alignment and structure |
|---|
| >3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ... Length = 215 | Back alignment and structure |
|---|
| >1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1 Length = 214 | Back alignment and structure |
|---|
| >2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ... Length = 220 | Back alignment and structure |
|---|
| >1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A* Length = 208 | Back alignment and structure |
|---|
| >3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C* Length = 441 | Back alignment and structure |
|---|
| >2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X Length = 265 | Back alignment and structure |
|---|
| >3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} Length = 222 | Back alignment and structure |
|---|
| >3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} PDB: 3mor_A* Length = 325 | Back alignment and structure |
|---|
| >1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A Length = 277 | Back alignment and structure |
|---|
| >3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} PDB: 3s3q_A* 3s3r_A* Length = 254 | Back alignment and structure |
|---|
| >3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A Length = 317 | Back alignment and structure |
|---|
| >3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa} Length = 291 | Back alignment and structure |
|---|
| >3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ... Length = 266 | Back alignment and structure |
|---|
| >3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Length = 106 | Back alignment and structure |
|---|
| >2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster} Length = 80 | Back alignment and structure |
|---|
| >2jye_A Granulin A; epithelin, human, stack of hairpins, alternative splicing, cytokine, glycoprotein, polymorphism, secreted; NMR {Homo sapiens} Length = 72 | Back alignment and structure |
|---|
| >2jyt_A Granulin-5, granulin C; epithelin, human, stack of hairpins, alternative splicing, cytokine, glycoprotein, polymorphism, secreted; NMR {Homo sapiens} PDB: 2jyu_A Length = 69 | Back alignment and structure |
|---|
| >2jyv_A Granulin-2, granulin F; granulin C, epithelin, human, stack of hairpins, alternative splicing, cytokine, glycoprotein, polymorphism, secreted; NMR {Homo sapiens} Length = 72 | Back alignment and structure |
|---|
| >3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} Length = 383 | Back alignment and structure |
|---|
| >3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} Length = 383 | Back alignment and structure |
|---|
| >2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A Length = 457 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 452 | |||
| 3tnx_A | 363 | Papain; hydrolase, cytoplasm for recombinant expre | 100.0 | |
| 1pci_A | 322 | Procaricain; zymogen, hydrolase, thiol protease; 3 | 100.0 | |
| 3qj3_A | 331 | Cathepsin L-like protein; hydrolase, proteinase, l | 100.0 | |
| 1by8_A | 314 | Protein (procathepsin K); hydrolase(sulfhydryl pro | 100.0 | |
| 2c0y_A | 315 | Procathepsin S; proenzyme, proteinase, hydrolase, | 100.0 | |
| 3qt4_A | 329 | Cathepsin-L-like midgut cysteine proteinase; hydro | 100.0 | |
| 1cs8_A | 316 | Human procathepsin L; prosegment, propeptide, inhi | 100.0 | |
| 2o6x_A | 310 | Procathepsin L1, secreted cathepsin L 1; hydrolase | 100.0 | |
| 1xkg_A | 312 | DER P I, major mite fecal allergen DER P 1; major | 100.0 | |
| 3pdf_A | 441 | Cathepsin C, dipeptidyl peptidase 1; two domains, | 100.0 | |
| 3hhi_A | 325 | Cathepsin B-like cysteine protease; occluding loop | 100.0 | |
| 1cqd_A | 221 | Protein (protease II); cysteine protease, glycopro | 100.0 | |
| 3p5u_A | 220 | Actinidin; SAD, cysteine proteinases, hydrolase; 1 | 100.0 | |
| 1s4v_A | 229 | Cysteine endopeptidase; KDEL ER retention signal, | 100.0 | |
| 2fo5_A | 262 | Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cyst | 100.0 | |
| 1ppo_A | 216 | Protease omega; hydrolase(thiol protease); 1.80A { | 100.0 | |
| 1iwd_A | 215 | Ervatamin B; cysteine protease, alpha-beta protein | 100.0 | |
| 1yal_A | 218 | Chymopapain; hydrolase, thiol protease; 1.70A {Car | 100.0 | |
| 3pbh_A | 317 | Procathepsin B; thiol protease, cysteine protease, | 100.0 | |
| 3u8e_A | 222 | Papain-like cysteine protease; papain-like cystein | 100.0 | |
| 2b1m_A | 246 | SPE31; papain-like, sugar binding protein; HET: NA | 100.0 | |
| 3kwz_A | 215 | Cathepsin K; enzyme inhibitor, covalent reversible | 100.0 | |
| 2cio_A | 212 | Papain; hydrolase/inhibitor, complex hydrolase/inh | 100.0 | |
| 2bdz_A | 214 | Mexicain; cysteine protease, peptidase_C1, papain- | 100.0 | |
| 3ioq_A | 213 | CMS1MS2; caricaceae, cysteine protease, papain fam | 100.0 | |
| 3ovx_A | 218 | Cathepsin S; hydrolase, covalent inhibitor, aldehy | 100.0 | |
| 1o0e_A | 208 | Ervatamin C; plant cysteine protease, two domain, | 100.0 | |
| 3f75_A | 224 | Toxopain-2, cathepsin L protease; medical structur | 100.0 | |
| 2xu3_A | 220 | Cathepsin L1; hydrolase, drug design, thiol protea | 100.0 | |
| 2oul_A | 241 | Falcipain 2; cysteine protease, inhibitor, macromo | 100.0 | |
| 3bwk_A | 243 | Cysteine protease falcipain-3; malaria, hydrolase; | 100.0 | |
| 8pch_A | 220 | Cathepsin H; hydrolase, protease, cysteine protein | 100.0 | |
| 1m6d_A | 214 | Cathepsin F, catsf; papain family cysteine proteas | 100.0 | |
| 3i06_A | 215 | Cruzipain; autocatalytic cleavage, glycoprotein, p | 100.0 | |
| 3f5v_A | 222 | DER P 1 allergen; allergy, asthma, DUST mites, gly | 100.0 | |
| 3cbj_A | 266 | Cathepsin B; cathepsin B, occluding loop, chagas d | 100.0 | |
| 3qsd_A | 254 | Cathepsin B-like peptidase (C01 family); cysteine | 100.0 | |
| 1deu_A | 277 | Procathepsin X; cysteine protease, proregion, pros | 100.0 | |
| 2wbf_X | 265 | Serine-repeat antigen protein; SERA, malaria, vacu | 100.0 | |
| 3ois_A | 291 | Cysteine protease; alpha and beta, hydrolase; HET: | 100.0 | |
| 2cb5_A | 453 | Protein (bleomycin hydrolase); aminopeptidase, cys | 100.0 | |
| 2e01_A | 457 | Cysteine proteinase 1; bleomycin hydrolase, thiol | 100.0 | |
| 3pw3_A | 383 | Aminopeptidase C; bleomycin, cysteine proteinase f | 100.0 | |
| 2jye_A | 72 | Granulin A; epithelin, human, stack of hairpins, a | 99.92 | |
| 2jyv_A | 72 | Granulin-2, granulin F; granulin C, epithelin, hum | 99.89 | |
| 2jyt_A | 69 | Granulin-5, granulin C; epithelin, human, stack of | 99.88 | |
| 3f75_P | 106 | Toxopain-2, cathepsin L propeptide; medical struct | 99.75 | |
| 2l95_A | 80 | Crammer, LP06209P; cysteine proteinase inhibitor, | 99.7 | |
| 1fwo_A | 35 | Oryzain beta chain; beta-hairpin stack fold, granu | 99.46 | |
| 1g26_A | 31 | Granulin A, HGA; granulin/epithelin protein repeat | 99.12 | |
| 1i8x_A | 30 | Granulin-1; two beta-hairpin stack, cytokine; NMR | 99.05 | |
| 1pxv_A | 183 | Cysteine protease; hydrolase; 1.80A {Staphylococcu | 96.96 | |
| 1x9y_A | 367 | Cysteine proteinase; half-barrel, barrel-sandwich- | 96.74 | |
| 1cv8_A | 174 | Staphopain; cysteine protease, thiol protease, pap | 96.36 | |
| 3erv_A | 236 | Putative C39-like peptidase; structural genomics, | 87.58 |
| >3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya} | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-84 Score=649.12 Aligned_cols=304 Identities=43% Similarity=0.782 Sum_probs=268.9
Q ss_pred chhHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhccCCCCceEEecccCCccchHHhhhhhcCcCCCccccc
Q 012960 22 CSDINELFETWCKQHGKAYSSEQEKQQRLKIFEDNYAFVTQHNNMGNSSFTLSLNAFADLTHQEFKASFLGFSAASIDHD 101 (452)
Q Consensus 22 ~~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~s~~lg~N~fsDlt~eEf~~~~l~~~~~~~~~~ 101 (452)
++.+.++|++||++|+|+|.+.+|+.+|+.||++|+++|++||++ +.+|++|+|+|+|||.|||++++++.........
T Consensus 59 ~~~~~~lf~~f~~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~~N~~-~~sy~~g~N~FaDlT~eEf~~~~~~~~~~~~~~~ 137 (363)
T 3tnx_A 59 TERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKK-NNSYWLGLNVFADMSNDEFKEKYTGSIAGNYTTT 137 (363)
T ss_dssp HHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHTTS-CCSEEECSCTTTTSCHHHHHHHHSCSSCSCCCCS
T ss_pred HHHHHHHHHHHHHHcCCcCCCHHHHHHHHHHHHHHHHHHHHHHcC-CCCeEEeccccccCCHHHHHHHhccccccccccc
Confidence 667889999999999999999999999999999999999999998 8899999999999999999999988665432211
Q ss_pred ccCCccccCCCCCCCCCCeeecCCCCCcccccCCCCCcchHHHHHHHHHHHHHHHHhCCccccChHHHhhhcCCCCCCCC
Q 012960 102 RRRNASVQSPGNLRDVPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCG 181 (452)
Q Consensus 102 ~~~~~~~~~~~~~~~lP~s~Dwr~~g~vtpVkdQg~cGsCWAfA~~~alE~~~~~~~~~~~~lS~q~lvdc~~~~~~gC~ 181 (452)
........ .....+||++||||++|+||||||||.||||||||++++||++++++++.++.||||+|+||+. .+.||+
T Consensus 138 ~~~~~~~~-~~~~~~lP~s~DWR~~g~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~LSeQ~LvdC~~-~~~GC~ 215 (363)
T 3tnx_A 138 ELSYEEVL-NDGDVNIPEYVDWRQKGAVTPVKNQGSCGSAWAFSAVSTIESIIKIRTGNLNEYSEQELLDCDR-RSYGCN 215 (363)
T ss_dssp SSSSSCCC-CCSCCCCCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTB
T ss_pred cccccccc-CcccCCCCcceecccCCCCCCCccCCcCCchhhhhhcccHHHHHHHHcCCCCCcCHHHHhcccC-CCCCCC
Confidence 11111111 2234579999999999999999999999999999999999999999999999999999999987 478999
Q ss_pred CCchHHHHHHHHHhCCcCCCCCCCCCCCCCCccccccccchhhhhhccccceEEeeeeEecCCChHHHHHHHHHcCCeEE
Q 012960 182 GGLMDYAYQFVIKNHGIDTEKDYPYRGQAGQCNKQKVLHFLTSFVLQLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSV 261 (452)
Q Consensus 182 GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~lk~al~~gPV~v 261 (452)
||++..|++|+.+ .||++|++|||.+.++.|.... ......++.++..++..++.+|+.+|++|||+|
T Consensus 216 GG~~~~a~~yi~~-~Gi~~e~~yPY~~~~~~c~~~~-----------~~~~~~~~~~~~~~~~~~e~~l~~~v~~gPvsv 283 (363)
T 3tnx_A 216 GGYPWSALQLVAQ-YGIHYRNTYPYEGVQRYCRSRE-----------KGPYAAKTDGVRQVQPYNEGALLYSIANQPVSV 283 (363)
T ss_dssp CCCHHHHHHHHHH-TCBCBTTTSCCCSSCCCCCGGG-----------GCSCSBCCCEEEEECSSCHHHHHHHHTTSCEEE
T ss_pred CCChHHHHhHHHh-cCccccccCCCcCcCCCcccCC-----------CCCceeeccceEEcchhhHHHHHHHHHcCCcEE
Confidence 9999999999865 5999999999999888776544 233345677788888889999999999999999
Q ss_pred EEEcCchhhhccCCceEeCCCCCCCCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCCCcccccccccc
Q 012960 262 GICGSERAFQLYSSGIFTGPCSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASY 341 (452)
Q Consensus 262 ~i~~~~~~f~~Y~sGiy~~~~~~~~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~ 341 (452)
+|++...+|++|++|||+.+|++.+||||+|||||+ +|||||||||++|||+|||||+||.++..|+|||++.|+|
T Consensus 284 ai~a~~~~F~~Y~sGVy~~~~~~~lnHaV~iVGyG~----~YWIVKNSWGt~WGe~GY~rI~Rg~~~~~~~CGI~~~a~y 359 (363)
T 3tnx_A 284 VLEAAGKDFQLYRGGIFVGPCGNKVDHAVAAVGYGP----NYILIRNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFY 359 (363)
T ss_dssp EECCCSHHHHTEEEEEECCCCCSCCCEEEEEEEEET----TEEEEECSBCTTSTBTTEEEEECCSCCSSCGGGTTSCEEE
T ss_pred EEEecchhhhCCCCCEECCCCCCCCCeEEEEEEcCC----CcEEEEeCCCCccccCcEEEEEcCCCCCCCcCCccceeee
Confidence 999887899999999999889888999999999986 5999999999999999999999999888899999999999
Q ss_pred ccc
Q 012960 342 PTK 344 (452)
Q Consensus 342 p~~ 344 (452)
|++
T Consensus 360 Pik 362 (363)
T 3tnx_A 360 PVK 362 (363)
T ss_dssp EEC
T ss_pred ccc
Confidence 985
|
| >1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1 | Back alignment and structure |
|---|
| >3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0 | Back alignment and structure |
|---|
| >1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A | Back alignment and structure |
|---|
| >2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
| >3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor} | Back alignment and structure |
|---|
| >1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A* | Back alignment and structure |
|---|
| >2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica} | Back alignment and structure |
|---|
| >1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1 | Back alignment and structure |
|---|
| >3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C* | Back alignment and structure |
|---|
| >3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A* | Back alignment and structure |
|---|
| >1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1 | Back alignment and structure |
|---|
| >1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1 | Back alignment and structure |
|---|
| >2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare} | Back alignment and structure |
|---|
| >1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A* | Back alignment and structure |
|---|
| >1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1 | Back alignment and structure |
|---|
| >1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E* | Back alignment and structure |
|---|
| >3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A | Back alignment and structure |
|---|
| >3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0 | Back alignment and structure |
|---|
| >2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A* | Back alignment and structure |
|---|
| >3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ... | Back alignment and structure |
|---|
| >2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ... | Back alignment and structure |
|---|
| >2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana} | Back alignment and structure |
|---|
| >3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1 | Back alignment and structure |
|---|
| >3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ... | Back alignment and structure |
|---|
| >1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A* | Back alignment and structure |
|---|
| >3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0 | Back alignment and structure |
|---|
| >2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ... | Back alignment and structure |
|---|
| >2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A | Back alignment and structure |
|---|
| >3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A* | Back alignment and structure |
|---|
| >8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A* | Back alignment and structure |
|---|
| >1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1 | Back alignment and structure |
|---|
| >3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ... | Back alignment and structure |
|---|
| >3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ... | Back alignment and structure |
|---|
| >3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A* | Back alignment and structure |
|---|
| >1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A | Back alignment and structure |
|---|
| >2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X | Back alignment and structure |
|---|
| >3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa} | Back alignment and structure |
|---|
| >2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A | Back alignment and structure |
|---|
| >2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A | Back alignment and structure |
|---|
| >3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} | Back alignment and structure |
|---|
| >2jye_A Granulin A; epithelin, human, stack of hairpins, alternative splicing, cytokine, glycoprotein, polymorphism, secreted; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2jyv_A Granulin-2, granulin F; granulin C, epithelin, human, stack of hairpins, alternative splicing, cytokine, glycoprotein, polymorphism, secreted; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2jyt_A Granulin-5, granulin C; epithelin, human, stack of hairpins, alternative splicing, cytokine, glycoprotein, polymorphism, secreted; NMR {Homo sapiens} PDB: 2jyu_A | Back alignment and structure |
|---|
| >3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} | Back alignment and structure |
|---|
| >2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster} | Back alignment and structure |
|---|
| >1fwo_A Oryzain beta chain; beta-hairpin stack fold, granulin/epithelin-like protein repeats, hydrolase; NMR {Synthetic} SCOP: g.3.16.1 | Back alignment and structure |
|---|
| >1g26_A Granulin A, HGA; granulin/epithelin protein repeats, beta-hairpin stack, cytokine; NMR {Synthetic} SCOP: g.3.16.1 | Back alignment and structure |
|---|
| >1i8x_A Granulin-1; two beta-hairpin stack, cytokine; NMR {Synthetic} SCOP: g.3.16.1 PDB: 1qgm_A 1i8y_A | Back alignment and structure |
|---|
| >1pxv_A Cysteine protease; hydrolase; 1.80A {Staphylococcus aureus} SCOP: d.3.1.1 PDB: 1y4h_A | Back alignment and structure |
|---|
| >1x9y_A Cysteine proteinase; half-barrel, barrel-sandwich-hybrid, hydrolase; 2.50A {Staphylococcus aureus} SCOP: d.3.1.1 d.17.1.4 | Back alignment and structure |
|---|
| >1cv8_A Staphopain; cysteine protease, thiol protease, papain family; HET: E64; 1.75A {Staphylococcus aureus} SCOP: d.3.1.1 | Back alignment and structure |
|---|
| >3erv_A Putative C39-like peptidase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Bacillus anthracis} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 452 | ||||
| d1cs8a_ | 316 | d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens | 3e-71 | |
| d1yala_ | 218 | d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [ | 2e-65 | |
| d1s4va_ | 224 | d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor | 6e-63 | |
| d1cqda_ | 216 | d.3.1.1 (A:) Proline-specific cysteine protease {G | 4e-62 | |
| d1xkga1 | 302 | d.3.1.1 (A:4-305) Major mite fecal allergen der p | 6e-61 | |
| d1ppoa_ | 216 | d.3.1.1 (A:) Caricain (protease omega) {Papaya (Ca | 1e-60 | |
| d1iwda_ | 215 | d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia | 3e-59 | |
| d1aeca_ | 218 | d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwi | 4e-59 | |
| d1o0ea_ | 208 | d.3.1.1 (A:) Ervatamin C {East indian rosebay (Erv | 2e-58 | |
| d2h7ja1 | 217 | d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sa | 3e-58 | |
| d2oula1 | 241 | d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falcip | 1e-57 | |
| d1m6da_ | 214 | d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [Ta | 6e-56 | |
| g8pch.1 | 228 | d.3.1.1 (P:,A:) Cathepsin H {Pig (Sus scrofa) [Tax | 7e-55 | |
| d2r6na1 | 215 | d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sa | 1e-54 | |
| d1fh0a_ | 221 | d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens | 6e-54 | |
| d1khqa_ | 212 | d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId | 2e-53 | |
| d1gmya_ | 254 | d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens | 1e-51 | |
| d1me4a_ | 215 | d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 56 | 5e-48 | |
| d1deua_ | 275 | d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens | 2e-46 | |
| g1k3b.1 | 233 | d.3.1.1 (B:,C:) Cathepsin C (dipeptidyl peptidase | 2e-42 | |
| d3gcba_ | 458 | d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (S | 6e-09 | |
| d2cb5a_ | 453 | d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapi | 6e-08 | |
| d1fwoa_ | 35 | g.3.16.1 (A:) Oryzain beta chain {Rice (Oryza sati | 0.001 |
| >d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 9606]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Cysteine proteinases superfamily: Cysteine proteinases family: Papain-like domain: (Pro)cathepsin L species: Human (Homo sapiens) [TaxId: 9606]
Score = 226 bits (575), Expect = 3e-71
Identities = 128/336 (38%), Positives = 172/336 (51%), Gaps = 33/336 (9%)
Query: 19 LNYCSDINELFETWCKQHGKAYSSEQEKQQRLKIFEDNYAFVTQHN---NMGNSSFTLSL 75
L + + + W H + Y E+ R ++E N + HN G SFT+++
Sbjct: 2 LTFDHSLEAQWTKWKAMHNRLYGMN-EEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAM 60
Query: 76 NAFADLTHQEFKASFLGFSAASIDHDRRRNASVQSPGNLRDVPASIDWRKKGAVTEVKDQ 135
NAF D+T +EF+ GF + + R V + P S+DWR+KG VT VK+Q
Sbjct: 61 NAFGDMTSEEFRQVMNGFQ-----NRKPRKGKVFQEPLFYEAPRSVDWREKGYVTPVKNQ 115
Query: 136 ASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSY-NSGCGGGLMDYAYQFVIK 194
CG+CWAFSATGA+EG TG L+SLSEQ L+DC N GC GGLMDYA+Q+V
Sbjct: 116 GQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQD 175
Query: 195 NHGIDTEKDYPYRGQAGQCNKQKVLHFLTSFVLQLNRHIVTIDGYKDVPENNEKQLLQAV 254
N G+D+E+ YPY C ++ V D EK L++AV
Sbjct: 176 NGGLDSEESYPYEATEESCKYN-------------PKYSVANDAGFVDIPKQEKALMKAV 222
Query: 255 VAQ-PVSVGICGSERAFQLYSSGIFTGP--CSTSLDHAVLIVGYDSE----NGVDYWIIK 307
P+SV I +F Y GI+ P S +DH VL+VGY E + YW++K
Sbjct: 223 ATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVK 282
Query: 308 NSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPT 343
NSWG WGM GY+ M ++ N CGI ASYPT
Sbjct: 283 NSWGEEWGMGGYVKMAKDRRN---HCGIASAASYPT 315
|
| >d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} Length = 218 | Back information, alignment and structure |
|---|
| >d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean (Ricinus communis) [TaxId: 3988]} Length = 224 | Back information, alignment and structure |
|---|
| >d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger rhizome (Zingiber officinale) [TaxId: 94328]} Length = 216 | Back information, alignment and structure |
|---|
| >d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1 {House-dust mite (Dermatophagoides pteronyssinus) [TaxId: 6956]} Length = 302 | Back information, alignment and structure |
|---|
| >d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica papaya) [TaxId: 3649]} Length = 216 | Back information, alignment and structure |
|---|
| >d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia coronaria) [TaxId: 52861]} Length = 215 | Back information, alignment and structure |
|---|
| >d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit (Actinidia chinensis) [TaxId: 3625]} Length = 218 | Back information, alignment and structure |
|---|
| >d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia coronaria) [TaxId: 52861]} Length = 208 | Back information, alignment and structure |
|---|
| >d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
| >d2oula1 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falciparum [TaxId: 5833]} Length = 241 | Back information, alignment and structure |
|---|
| >d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} Length = 214 | Back information, alignment and structure |
|---|
| >d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 9606]} Length = 215 | Back information, alignment and structure |
|---|
| >d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 9606]} Length = 221 | Back information, alignment and structure |
|---|
| >d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]} Length = 212 | Back information, alignment and structure |
|---|
| >d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 9606]} Length = 254 | Back information, alignment and structure |
|---|
| >d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]} Length = 215 | Back information, alignment and structure |
|---|
| >d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 9606]} Length = 275 | Back information, alignment and structure |
|---|
| >d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId: 4932]} Length = 458 | Back information, alignment and structure |
|---|
| >d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 9606]} Length = 453 | Back information, alignment and structure |
|---|
| >d1fwoa_ g.3.16.1 (A:) Oryzain beta chain {Rice (Oryza sativa) [TaxId: 4530]} Length = 35 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 452 | |||
| d1cs8a_ | 316 | (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 960 | 100.0 | |
| d1xkga1 | 302 | Major mite fecal allergen der p 1 {House-dust mite | 100.0 | |
| d1ppoa_ | 216 | Caricain (protease omega) {Papaya (Carica papaya) | 100.0 | |
| d1yala_ | 218 | Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} | 100.0 | |
| d1cqda_ | 216 | Proline-specific cysteine protease {Ginger rhizome | 100.0 | |
| d1s4va_ | 224 | Vignain (bean endopeptidase) {Castor bean (Ricinus | 100.0 | |
| d2oula1 | 241 | Falcipain 2 {Plasmodium falciparum [TaxId: 5833]} | 100.0 | |
| d2h7ja1 | 217 | (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 960 | 100.0 | |
| d1iwda_ | 215 | Ervatamin B {Adam's apple (Ervatamia coronaria) [T | 100.0 | |
| d1khqa_ | 212 | Papain {Papaya (Carica papaya) [TaxId: 3649]} | 100.0 | |
| d2r6na1 | 215 | (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 960 | 100.0 | |
| d1aeca_ | 218 | Actinidin {Chinese gooseberry or kiwifruit (Actini | 100.0 | |
| d1o0ea_ | 208 | Ervatamin C {East indian rosebay (Ervatamia corona | 100.0 | |
| g8pch.1 | 228 | Cathepsin H {Pig (Sus scrofa) [TaxId: 9823]} | 100.0 | |
| d1fh0a_ | 221 | (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 960 | 100.0 | |
| d1m6da_ | 214 | Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1me4a_ | 215 | Cruzain {Trypanosoma cruzi [TaxId: 5693]} | 100.0 | |
| g1k3b.1 | 233 | Cathepsin C (dipeptidyl peptidase I), catalytic do | 100.0 | |
| d1deua_ | 275 | (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 960 | 100.0 | |
| d1gmya_ | 254 | (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 960 | 100.0 | |
| d3gcba_ | 458 | Bleomycin hydrolase {Baker's yeast (Saccharomyces | 99.67 | |
| d2cb5a_ | 453 | Bleomycin hydrolase {Human (Homo sapiens) [TaxId: | 99.56 | |
| d1fwoa_ | 35 | Oryzain beta chain {Rice (Oryza sativa) [TaxId: 45 | 99.47 | |
| d1g26a_ | 31 | N-terminal domain of granulin-1 {Human (Homo sapie | 99.07 | |
| d1i8ya_ | 28 | N-terminal domain of granulin-1 {Carp (Cyprinus ca | 98.26 | |
| d1pxva_ | 183 | Staphopain SspB {Staphylococcus aureus [TaxId: 128 | 92.62 | |
| d1cv8a_ | 173 | Staphopain StpA {Staphylococcus aureus [TaxId: 128 | 90.29 |
| >d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Cysteine proteinases superfamily: Cysteine proteinases family: Papain-like domain: (Pro)cathepsin L species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-74 Score=575.46 Aligned_cols=301 Identities=42% Similarity=0.823 Sum_probs=256.2
Q ss_pred chhHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhccC---CCCceEEecccCCccchHHhhhhhcCcCCCcc
Q 012960 22 CSDINELFETWCKQHGKAYSSEQEKQQRLKIFEDNYAFVTQHNNM---GNSSFTLSLNAFADLTHQEFKASFLGFSAASI 98 (452)
Q Consensus 22 ~~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~~N~~---~~~s~~lg~N~fsDlt~eEf~~~~l~~~~~~~ 98 (452)
+..+..+|++||++|+|+|.+ +|+.+|++||.+|+++|++||++ ++.+|+||+|+|+|||.|||++++++......
T Consensus 5 ~~~l~~~F~~f~~~~~K~Y~~-~ee~~R~~iF~~N~~~I~~~N~~~~~~~~~~~~g~N~fsDlt~eEf~~~~~~~~~~~~ 83 (316)
T d1cs8a_ 5 DHSLEAQWTKWKAMHNRLYGM-NEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKP 83 (316)
T ss_dssp CGGGHHHHHHHHHHTTCCCCT-THHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCTTTTCCHHHHHHHHCCBCCCCC
T ss_pred cHHHHHHHHHHHHHhCCcCCC-HHHHHHHHHHHHHHHHHHHHHhHhhcCCCceEEeceeccccCcHHHHhhhcccccccc
Confidence 466788999999999999977 57789999999999999999985 57899999999999999999999876554432
Q ss_pred cccccCCccccCCCCCCCCCCeeecCCCCCcccccCCCCCcchHHHHHHHHHHHHHHHHhCCccccChHHHhhhcCC-CC
Q 012960 99 DHDRRRNASVQSPGNLRDVPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRS-YN 177 (452)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~lP~s~Dwr~~g~vtpVkdQg~cGsCWAfA~~~alE~~~~~~~~~~~~lS~q~lvdc~~~-~~ 177 (452)
... .... .....+||++||||++|+|+||||||.||||||||+++++|++++++++..+.||+|+|+||+.. .+
T Consensus 84 ~~~----~~~~-~~~~~~lP~s~Dwr~~g~vtpVkdQG~CGsCwAfa~~~~~E~~~~i~~~~~~~lS~Q~lvdC~~~~~~ 158 (316)
T d1cs8a_ 84 RKG----KVFQ-EPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGN 158 (316)
T ss_dssp SCC----EECC-CCTTCCCCSCEEGGGGTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTC
T ss_pred ccC----cccc-CcccccCCCceECCcCCcccccccCCCCceeeehhhhHHHHHHHHhhcCCcccchhhhhhhccccccC
Confidence 211 1111 23356899999999999999999999999999999999999999999999999999999999864 36
Q ss_pred CCCCCCchHHHHHHHHHhCCcCCCCCCCCCCCCCCccccccccchhhhhhccccceEEeeeeEecCCChHHHHHHHHHc-
Q 012960 178 SGCGGGLMDYAYQFVIKNHGIDTEKDYPYRGQAGQCNKQKVLHFLTSFVLQLNRHIVTIDGYKDVPENNEKQLLQAVVA- 256 (452)
Q Consensus 178 ~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~lk~al~~- 256 (452)
.+|+||++..|++|+..++++.+|..|||.+....|.... ......+..+.... .+++.|+++|+.
T Consensus 159 ~~c~gg~~~~a~~y~~~~g~~~~e~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~-~~~~~l~~~l~~~ 225 (316)
T d1cs8a_ 159 EGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNP------------KYSVANDAGFVDIP-KQEKALMKAVATV 225 (316)
T ss_dssp CGGGCBCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCCG------------GGEEECCCCEEECC-SCHHHHHHHHHHH
T ss_pred CCCCCCchHHHHHHHHhcCccccccccccccccccccccc------------cccccccccccccc-CcHHHHHHHHHHh
Confidence 7899999999999999887789999999999888887654 23344555555554 567788888765
Q ss_pred CCeEEEEEcCchhhhccCCceEe-CCCCC-CCCceEEEEEEeec----CCeeEEEEEcCCCCCCCCCcEEEEEecCCCCC
Q 012960 257 QPVSVGICGSERAFQLYSSGIFT-GPCST-SLDHAVLIVGYDSE----NGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSL 330 (452)
Q Consensus 257 gPV~v~i~~~~~~f~~Y~sGiy~-~~~~~-~~~HaV~IVGyg~~----~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~ 330 (452)
|||+|+|++...+|++|++|||. +.|+. .++|||+|||||++ +|++|||||||||++|||+|||||+|+..
T Consensus 226 gpv~v~i~~~~~~f~~y~~Gi~~~~~c~~~~~nHaV~iVGyG~d~~~~~g~~YWIikNSWG~~WGe~GY~ri~r~~~--- 302 (316)
T d1cs8a_ 226 GPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRR--- 302 (316)
T ss_dssp CCEEEEECCCSHHHHTEEEEEECCTTCCSSCCCEEEEEEEEEEECCSSCCEEEEEEECSBCTTSTBTTEEEEECSSS---
T ss_pred CCeEEEEEeccchhccccCCcccCCCCCCCcCCEEEEEEEEcccccCCCCCeEEEEEeCCCCCcccCCEEEEeeCCC---
Confidence 99999999987889999999985 45654 57999999999965 68999999999999999999999999853
Q ss_pred Cccccccccccccc
Q 012960 331 GICGINMLASYPTK 344 (452)
Q Consensus 331 ~~CgI~~~~~~p~~ 344 (452)
|+|||++.++||++
T Consensus 303 n~CGI~~~~~yP~v 316 (316)
T d1cs8a_ 303 NHCGIASAASYPTV 316 (316)
T ss_dssp SGGGTTTSCEEECC
T ss_pred CcCccCCeeeeeeC
Confidence 59999999999984
|
| >d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1 {House-dust mite (Dermatophagoides pteronyssinus) [TaxId: 6956]} | Back information, alignment and structure |
|---|
| >d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica papaya) [TaxId: 3649]} | Back information, alignment and structure |
|---|
| >d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} | Back information, alignment and structure |
|---|
| >d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger rhizome (Zingiber officinale) [TaxId: 94328]} | Back information, alignment and structure |
|---|
| >d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean (Ricinus communis) [TaxId: 3988]} | Back information, alignment and structure |
|---|
| >d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia coronaria) [TaxId: 52861]} | Back information, alignment and structure |
|---|
| >d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]} | Back information, alignment and structure |
|---|
| >d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit (Actinidia chinensis) [TaxId: 3625]} | Back information, alignment and structure |
|---|
| >d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia coronaria) [TaxId: 52861]} | Back information, alignment and structure |
|---|
| >d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
| >d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1fwoa_ g.3.16.1 (A:) Oryzain beta chain {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
| >d1g26a_ g.3.16.1 (A:) N-terminal domain of granulin-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1i8ya_ g.3.16.1 (A:) N-terminal domain of granulin-1 {Carp (Cyprinus carpio) [TaxId: 7962]} | Back information, alignment and structure |
|---|
| >d1pxva_ d.3.1.1 (A:) Staphopain SspB {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
| >d1cv8a_ d.3.1.1 (A:) Staphopain StpA {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
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