Citrus Sinensis ID: 013078

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450
MARRGGSGGGAVFGIGYCLVLVLVLVYSRICMSARSDKETRQRFYGNLVNTTEEDSGDGSIAKMFDRVLEKEFPDNEQSSGSDGSSFNSSVADQQAVLETVAKITHEKMKRNDTQEANGTRPFQFQDVFFSDQEDSDDEMTLIDKKDNVFVMSNKKSKYPVLQVDLRLISDLVVVIVSAAIGGIIFSCLGQPVIVGYLLAGSIIGPGGLKFISELVQLCGAKLSEGVFVGSFLSMSSTAVVVKFLVEQNSNNALHGQVTIGTLILQDCAVGLLFALLPVLGGNSGLLQGMVSMGKLLLVLSIYLTVTSILSWSFVPRFLKLMIQLSSQTNELYQLAAVAFCLLSAWCSDKLGLSLELGSFMAGVMISTTDFAKHTLDQVEPIRNLFAALFLSSIGMLIHVHFLWNHVDILLASVILVIIVKTAVGTIVTKLFGYSMRTSFLVSWLPKLME
cccccccccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccccccccccccHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccc
cccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHcccccccccccccccHHHHHHHHHHHHccccccccccccccccccHHHHHHEHHEEEEEcccccccccccccccccccEEEEEEcccccccccccEEEEccccEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccEEEHHHHHHEEcccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcc
marrggsgggavFGIGYCLVLVLVLVYSRICMSARSDKETRQRFYGNLvntteedsgdgsIAKMFDRVLekefpdneqssgsdgssfnssvADQQAVLETVAKITHEKmkrndtqeangtrpfqfqdvffsdqedsddemtlidkkdnvfvmsnkkskypvlQVDLRLISDLVVVIVSAAIGGIIFSCLGQPVIVGYLLagsiigpggLKFISELVQLCGAKLSEGVFVGSFLSMSSTAVVVKFLVEQnsnnalhgqvtIGTLILQDCAVGLLFALLpvlggnsglLQGMVSMGKLLLVLSIYLTVTSILSWSFVPRFLKLMIQLSSQTNELYQLAAVAFCLLSAWCSDKLGLSLELGSFMAGVMISTTDFAKHTLDQVEPIRNLFAALFLSSIGMLIHVHFLWNHVDILLASVILVIIVKTAVGTIVTKLFGYSMRTSFLVSWLPKLME
marrggsgggavFGIGYCLVLVLVLVYSRICMsarsdketrqrFYGNlvntteedsgdgsIAKMFDRVLEKEFPDNEQSSGSDGSSFNSSVADQQAVLETVAKITHEkmkrndtqeangtrpfqFQDVFFSDQEDSDDEMTLIDKKDNVFVMSNKKSKYPVLQVDLRLISDLVVVIVSAAIGGIIFSCLGQPVIVGYLLAGSIIGPGGLKFISELVQLCGAKLSEGVFVGSFLSMSSTAVVVKFLVEQNSNNALHGQVTIGTLILQDCAVGLLFALLPVLGGNSGLLQGMVSMGKLLLVLSIYLTVTSILSWSFVPRFLKLMIQLSSQTNELYQLAAVAFCLLSAWCSDKLGLSLELGSFMAGVMISTTDFAKHTLDQVEPIRNLFAALFLSSIGMLIHVHFLWNHVDILLASVILVIIVKTAVGTIVTKLFGYSMRTsflvswlpklme
MARRggsgggavfgigYClvlvlvlvYSRICMSARSDKETRQRFYGNLVNTTEEDSGDGSIAKMFDRVLEKEFPDNEQssgsdgssfnssVADQQAVLETVAKITHEKMKRNDTQEANGTRPFQFQDVFFSDQEDSDDEMTLIDKKDNVFVMSNKKSKYPVLQVDLRLISDLvvvivsaaiggiiFSCLGQPVIVGYLLAGSIIGPGGLKFISELVQLCGAKLSEGVFVGSFLSMSSTAVVVKFLVEQNSNNALHGQVTIGTLILQDCAVGLLFALLPVLGGNSGLLQGMVSMGKLLLVLSIYLTVTSILSWSFVPRFLKLMIQLSSQTNELYQLAAVAFCLLSAWCSDKLGLSLELGSFMAGVMISTTDFAKHTLDQVEPIRNLFAALFLSSIGMLIHVHFLWNHvdillasvilviivKTAVGTIVTKLFGYSMRTSFLVSWLPKLME
*********GAVFGIGYCLVLVLVLVYSRICMSA********RFYGNLV*********************************************************************************************IDKKDNVFVMSNKKSKYPVLQVDLRLISDLVVVIVSAAIGGIIFSCLGQPVIVGYLLAGSIIGPGGLKFISELVQLCGAKLSEGVFVGSFLSMSSTAVVVKFLVEQNSNNALHGQVTIGTLILQDCAVGLLFALLPVLGGNSGLLQGMVSMGKLLLVLSIYLTVTSILSWSFVPRFLKLMIQLSSQTNELYQLAAVAFCLLSAWCSDKLGLSLELGSFMAGVMISTTDFAKHTLDQVEPIRNLFAALFLSSIGMLIHVHFLWNHVDILLASVILVIIVKTAVGTIVTKLFGYSMRTSFLVSWLP****
************FGIGYCLVLVLVLVYSRICM*********************************DR****************************AVLETVA**************************FFS*QEDSDDEMTLIDKKDNVFVMSNKKSKYPVLQVDLRLISDLVVVIVSAAIGGIIFSCLGQPVIVGYLLAGSIIGPGGLKFISELVQLCGAKLSEGVFVGSFLSMSSTAVVVKFLVE*******HGQVTIGTLILQDCAVGLLFALLPVLGGNSGLLQGMVSMGKLLLVLSIYLTVTSILSWSFVPRFLKLMIQLSSQTNELYQLAAVAFCLLSAWCSDKLGLSLELGSFMAGVMISTTDFAKHTLDQVEPIRNLFAALFLSSIGMLIHVHFLWNHVDILLASVILVIIVKTAVGTIVTKLFGYSMRTSFLVSWLPKLME
********GGAVFGIGYCLVLVLVLVYSRICMSARSDKETRQRFYGNLVNTTEEDSGDGSIAKMFDRVLEKEF*******************DQQAVLETVAKITHEKMKRNDTQEANGTRPFQFQDVFFSDQEDSDDEMTLIDKKDNVFVMSNKKSKYPVLQVDLRLISDLVVVIVSAAIGGIIFSCLGQPVIVGYLLAGSIIGPGGLKFISELVQLCGAKLSEGVFVGSFLSMSSTAVVVKFLVEQNSNNALHGQVTIGTLILQDCAVGLLFALLPVLGGNSGLLQGMVSMGKLLLVLSIYLTVTSILSWSFVPRFLKLMIQLSSQTNELYQLAAVAFCLLSAWCSDKLGLSLELGSFMAGVMISTTDFAKHTLDQVEPIRNLFAALFLSSIGMLIHVHFLWNHVDILLASVILVIIVKTAVGTIVTKLFGYSMRTSFLVSWLPKLME
********GGAVFGIGYCLVLVLVLVYSRICMSARSDKETRQRFYGNLVNT********SIAKMFDRVLEKEFP************FNSSVADQQAVLETVAKITHE************TRPFQFQDVFFSDQEDSDDEMTLIDKKDNVFVMSNKKSKYPVLQVDLRLISDLVVVIVSAAIGGIIFSCLGQPVIVGYLLAGSIIGPGGLKFISELVQLCGAKLSEGVFVGSFLSMSSTAVVVKFLVEQNSNNALHGQVTIGTLILQDCAVGLLFALLPVLGGNSGLLQGMVSMGKLLLVLSIYLTVTSILSWSFVPRFLKLMIQLSSQTNELYQLAAVAFCLLSAWCSDKLGLSLELGSFMAGVMISTTDFAKHTLDQVEPIRNLFAALFLSSIGMLIHVHFLWNHVDILLASVILVIIVKTAVGTIVTKLFGYSMRTSFLVSWLPKLME
oooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiii
ooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooo
oooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MARRGGSGGGAVFGIGYCLVLVLVLVYSRICMSARSDKETRQRFYGNLVNTTEEDSGDGSIAKMFDRVLEKEFPDNEQSSGSDGSSFNSSVADQQAVLETVAKITHEKMKRNDTQEANGTRPFQFQDVFFSDQEDSDDEMTLIDKKDNVFVMSNKKSKYPVLQVDLRLISDLVVVIVSAAIGGIIFSCLGQPVIVGYLLAGSIIGPGGLKFISELVQLCGAKLSEGVFVGSFLSMSSTAVVVKFLVEQNSNNALHGQVTIGTLILQDCAVGLLFALLPVLGGNSGLLQGMVSMGKLLLVLSIYLTVTSILSWSFVPRFLKLMIQLSSQTNELYQLAAVAFCLLSAWCSDKLGLSLELGSFMAGVMISTTDFAKHTLDQVEPIRNLFAALFLSSIGMLIHVHFLWNHVDILLASVILVIIVKTAVGTIVTKLFGYSMRTSFLVSWLPKLME
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query450 2.2.26 [Sep-21-2011]
Q8VYR9568 K(+) efflux antiporter 5 yes no 0.913 0.723 0.739 0.0
Q9ZUN3592 K(+) efflux antiporter 4 no no 0.888 0.675 0.602 1e-141
B5X0N6597 K(+) efflux antiporter 6 no no 0.844 0.636 0.621 1e-139
Q8BH01678 Transmembrane and coiled- yes no 0.748 0.497 0.237 4e-21
B1JIU4 602 Glutathione-regulated pot yes no 0.591 0.441 0.289 1e-20
Q664Q5 602 Glutathione-regulated pot yes no 0.591 0.441 0.289 1e-20
A4TGX5 602 Glutathione-regulated pot yes no 0.591 0.441 0.289 1e-20
Q1CCS7 602 Glutathione-regulated pot yes no 0.591 0.441 0.289 1e-20
A9R473 602 Glutathione-regulated pot yes no 0.591 0.441 0.289 1e-20
Q8ZJC4 602 Glutathione-regulated pot yes no 0.591 0.441 0.289 1e-20
>sp|Q8VYR9|KEA5_ARATH K(+) efflux antiporter 5 OS=Arabidopsis thaliana GN=KEA5 PE=2 SV=1 Back     alignment and function desciption
 Score =  683 bits (1762), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/464 (73%), Positives = 382/464 (82%), Gaps = 53/464 (11%)

Query: 34  ARSDKETRQRFYGNLVNTTEEDSGDGSIAKMFDRVLEKEFPDNEQSSGSDGSSFNSSVAD 93
           ARSD+ETR+RFYGN+VN+T   +G+GSIAKMFDRVLEKEF +N+   GSDG+SFNSSVAD
Sbjct: 21  ARSDEETRERFYGNVVNSTAPGNGEGSIAKMFDRVLEKEFSENDSPEGSDGASFNSSVAD 80

Query: 94  QQAVLETVAKITHEKMKRNDTQEANGTRPFQFQDVFFSDQEDSDDEMTLIDKKDNVFVMS 153
           QQA +ETVAK+THEK KRNDTQE NGTRPFQ QDVF  + EDSDD MTLIDKK+NVFVMS
Sbjct: 81  QQAEIETVAKVTHEKGKRNDTQENNGTRPFQLQDVFSLENEDSDD-MTLIDKKNNVFVMS 139

Query: 154 NKKSKYPVLQVDLRLISDLVVVIVSAAIGGIIFSCLGQPVIVGYLLAGSIIGPGGLKFIS 213
           NKKSKYP+LQVDLRLISDLVV+IV AAIGGI+FSCLGQPVIVGYLLAGSIIGPGGLKFIS
Sbjct: 140 NKKSKYPILQVDLRLISDLVVIIVFAAIGGIVFSCLGQPVIVGYLLAGSIIGPGGLKFIS 199

Query: 214 ELVQ----------------------------------------------------LCGA 221
           E+VQ                                                    LCGA
Sbjct: 200 EMVQVETVAQFGVVFLLFALGLEFSMTKLKVVGPVAVLGGLLQIVLLMFLCGVTALLCGA 259

Query: 222 KLSEGVFVGSFLSMSSTAVVVKFLVEQNSNNALHGQVTIGTLILQDCAVGLLFALLPVLG 281
           +LSEG+FVG+FLSMSSTAVVVKFLVE+NS ++LHGQVTIG LI QDC VGLLFALLPVLG
Sbjct: 260 RLSEGIFVGAFLSMSSTAVVVKFLVERNSTSSLHGQVTIGILIFQDCVVGLLFALLPVLG 319

Query: 282 GNSGLLQGMVSMGKLLLVLSIYLTVTSILSWSFVPRFLKLMIQLSSQTNELYQLAAVAFC 341
           GNSGLLQG++SMGKLLL+LSIYLTV S+L+WSFVPRFLKLMIQLSSQTNELYQLAAVAFC
Sbjct: 320 GNSGLLQGIISMGKLLLILSIYLTVASLLTWSFVPRFLKLMIQLSSQTNELYQLAAVAFC 379

Query: 342 LLSAWCSDKLGLSLELGSFMAGVMISTTDFAKHTLDQVEPIRNLFAALFLSSIGMLIHVH 401
           LLSAWCSDKLGLSLELGSF+AGVM+STT+FA+HTL+QVEPIRNLFAALFLSSIGMLI+VH
Sbjct: 380 LLSAWCSDKLGLSLELGSFVAGVMLSTTEFAQHTLEQVEPIRNLFAALFLSSIGMLINVH 439

Query: 402 FLWNHVDILLASVILVIIVKTAVGTIVTKLFGYSMRTSFLVSWL 445
           FLWNHVDILLASVILVI++KTA+  +V K F Y+MR SF V  L
Sbjct: 440 FLWNHVDILLASVILVIVIKTAIAAVVVKAFRYNMRISFHVGVL 483
May operate as a K(+)/H(+) antiporter.
Arabidopsis thaliana (taxid: 3702)
>sp|Q9ZUN3|KEA4_ARATH K(+) efflux antiporter 4 OS=Arabidopsis thaliana GN=KEA4 PE=2 SV=2 Back     alignment and function description
>sp|B5X0N6|KEA6_ARATH K(+) efflux antiporter 6 OS=Arabidopsis thaliana GN=KEA6 PE=2 SV=1 Back     alignment and function description
>sp|Q8BH01|TMCO3_MOUSE Transmembrane and coiled-coil domain-containing protein 3 OS=Mus musculus GN=Tmco3 PE=2 SV=1 Back     alignment and function description
>sp|B1JIU4|KEFB_YERPY Glutathione-regulated potassium-efflux system protein KefB OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=kefB PE=3 SV=1 Back     alignment and function description
>sp|Q664Q5|KEFB_YERPS Glutathione-regulated potassium-efflux system protein KefB OS=Yersinia pseudotuberculosis serotype I (strain IP32953) GN=kefB PE=3 SV=1 Back     alignment and function description
>sp|A4TGX5|KEFB_YERPP Glutathione-regulated potassium-efflux system protein KefB OS=Yersinia pestis (strain Pestoides F) GN=kefB PE=3 SV=1 Back     alignment and function description
>sp|Q1CCS7|KEFB_YERPN Glutathione-regulated potassium-efflux system protein KefB OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=kefB PE=3 SV=1 Back     alignment and function description
>sp|A9R473|KEFB_YERPG Glutathione-regulated potassium-efflux system protein KefB OS=Yersinia pestis bv. Antiqua (strain Angola) GN=kefB PE=3 SV=1 Back     alignment and function description
>sp|Q8ZJC4|KEFB_YERPE Glutathione-regulated potassium-efflux system protein KefB OS=Yersinia pestis GN=kefB PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query450
297795979 569 hypothetical protein ARALYDRAFT_495238 [ 0.944 0.746 0.722 0.0
224120182 580 potassium efflux antiporter [Populus tri 0.964 0.748 0.719 0.0
186531286 565 K(+) efflux antiporter 5 [Arabidopsis th 0.913 0.727 0.739 0.0
18423310 568 K(+) efflux antiporter 5 [Arabidopsis th 0.913 0.723 0.739 0.0
449460782 578 PREDICTED: K(+) efflux antiporter 5-like 0.966 0.752 0.732 0.0
356561749 576 PREDICTED: K(+) efflux antiporter 5-like 0.948 0.741 0.738 0.0
356529340 576 PREDICTED: K(+) efflux antiporter 5-like 0.948 0.741 0.740 0.0
225455594 577 PREDICTED: K(+) efflux antiporter 5 [Vit 0.942 0.734 0.771 0.0
255539661 565 Glutathione-regulated potassium-efflux s 0.922 0.734 0.752 0.0
10177870 562 potassium/proton antiporter-like protein 0.906 0.725 0.710 0.0
>gi|297795979|ref|XP_002865874.1| hypothetical protein ARALYDRAFT_495238 [Arabidopsis lyrata subsp. lyrata] gi|297311709|gb|EFH42133.1| hypothetical protein ARALYDRAFT_495238 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
 Score =  687 bits (1774), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/483 (72%), Positives = 391/483 (80%), Gaps = 58/483 (12%)

Query: 15  IGYCLVLVLVLVYSRICMSARSDKETRQRFYGNLVNTTEEDSGDGSIAKMFDRVLEKEFP 74
           IG+  +L+L        +SARSD+ETR+RFYGN+VN+T   +G+GSIAKMFDRVLEKEF 
Sbjct: 8   IGFTFLLLL-----DTSLSARSDEETRERFYGNVVNSTAPGNGEGSIAKMFDRVLEKEFS 62

Query: 75  DNEQSSGSDGSSFNSSVADQQAVLETVAKITHEKMKRNDTQEANGTRPFQFQDVFFSDQE 134
           DN+   GSDG+SFNSSVADQQA +ETVAK+THEK KRNDTQE NGTRPFQ QDVF  + E
Sbjct: 63  DNDSPEGSDGASFNSSVADQQAEIETVAKVTHEKGKRNDTQENNGTRPFQLQDVFSLENE 122

Query: 135 DSDDEMTLIDKKDNVFVMSNKKSKYPVLQVDLRLISDLVVVIVSAAIGGIIFSCLGQPVI 194
           DSDD MTLIDKK+NVFVMSNKKSKYP+LQVDLRLISDLVV+IV AAIGGI+FSCLGQPVI
Sbjct: 123 DSDD-MTLIDKKNNVFVMSNKKSKYPILQVDLRLISDLVVIIVFAAIGGIVFSCLGQPVI 181

Query: 195 VGYLLAGSIIGPGGLKFISELVQ------------------------------------- 217
           VGYLLAGSIIGPGGLKFISE+VQ                                     
Sbjct: 182 VGYLLAGSIIGPGGLKFISEMVQVETVAQFGVVFLLFALGLEFSMTKLKVVGPVAVLGGL 241

Query: 218 ---------------LCGAKLSEGVFVGSFLSMSSTAVVVKFLVEQNSNNALHGQVTIGT 262
                          LCGA+LSEG+FVG+FLSMSSTAVVVKFLVE+NS ++LHGQVTIG 
Sbjct: 242 LQIVLLMFLCGVTALLCGARLSEGIFVGAFLSMSSTAVVVKFLVERNSTSSLHGQVTIGI 301

Query: 263 LILQDCAVGLLFALLPVLGGNSGLLQGMVSMGKLLLVLSIYLTVTSILSWSFVPRFLKLM 322
           LI QDC VGLLFALLPVLGGNSGLLQG++SMGKLLL+LSIYLTV S+L+WSFVPRFLKLM
Sbjct: 302 LIFQDCVVGLLFALLPVLGGNSGLLQGIISMGKLLLILSIYLTVASLLTWSFVPRFLKLM 361

Query: 323 IQLSSQTNELYQLAAVAFCLLSAWCSDKLGLSLELGSFMAGVMISTTDFAKHTLDQVEPI 382
           IQLSSQTNELYQLAAVAFCLLSAWCSDKLGLSLELGSF+AGVM+STT+FA+HTL+QVEPI
Sbjct: 362 IQLSSQTNELYQLAAVAFCLLSAWCSDKLGLSLELGSFVAGVMLSTTEFAQHTLEQVEPI 421

Query: 383 RNLFAALFLSSIGMLIHVHFLWNHVDILLASVILVIIVKTAVGTIVTKLFGYSMRTSFLV 442
           RNLFAALFLSSIGMLI+VHFLWNHVDILLASVILVI++KTA+  +V K F Y+MR SF V
Sbjct: 422 RNLFAALFLSSIGMLINVHFLWNHVDILLASVILVIVIKTAIAAVVVKAFRYNMRISFHV 481

Query: 443 SWL 445
             L
Sbjct: 482 GVL 484

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224120182|ref|XP_002318266.1| potassium efflux antiporter [Populus trichocarpa] gi|222858939|gb|EEE96486.1| potassium efflux antiporter [Populus trichocarpa] Back     alignment and taxonomy information
>gi|186531286|ref|NP_001119415.1| K(+) efflux antiporter 5 [Arabidopsis thaliana] gi|332008735|gb|AED96118.1| K(+) efflux antiporter 5 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|18423310|ref|NP_568763.1| K(+) efflux antiporter 5 [Arabidopsis thaliana] gi|75304451|sp|Q8VYR9.1|KEA5_ARATH RecName: Full=K(+) efflux antiporter 5; Short=AtKEA5 gi|17979127|gb|AAL49821.1| putative potassium/proton antiporter protein [Arabidopsis thaliana] gi|21537045|gb|AAM61386.1| potassium/proton antiporter-like protein [Arabidopsis thaliana] gi|332008734|gb|AED96117.1| K(+) efflux antiporter 5 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449460782|ref|XP_004148124.1| PREDICTED: K(+) efflux antiporter 5-like [Cucumis sativus] gi|449499664|ref|XP_004160879.1| PREDICTED: K(+) efflux antiporter 5-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356561749|ref|XP_003549141.1| PREDICTED: K(+) efflux antiporter 5-like [Glycine max] Back     alignment and taxonomy information
>gi|356529340|ref|XP_003533253.1| PREDICTED: K(+) efflux antiporter 5-like [Glycine max] Back     alignment and taxonomy information
>gi|225455594|ref|XP_002269354.1| PREDICTED: K(+) efflux antiporter 5 [Vitis vinifera] gi|296084106|emb|CBI24494.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255539661|ref|XP_002510895.1| Glutathione-regulated potassium-efflux system protein kefB, putative [Ricinus communis] gi|223550010|gb|EEF51497.1| Glutathione-regulated potassium-efflux system protein kefB, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|10177870|dbj|BAB11240.1| potassium/proton antiporter-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query450
TAIR|locus:2165326568 KEA5 "K+ efflux antiporter 5" 0.506 0.401 0.789 1.1e-159
TAIR|locus:2050382592 KEA4 "K+ efflux antiporter 4" 0.5 0.380 0.711 1.9e-121
TAIR|locus:2181910597 KEA6 "K+ efflux antiporter 6" 0.504 0.380 0.700 7.5e-120
TIGR_CMR|DET_1627 567 DET_1627 "sodium/hydrogen exch 0.537 0.426 0.312 2.1e-26
UNIPROTKB|F1RN34678 TMCO3 "Uncharacterized protein 0.486 0.323 0.297 1.9e-23
UNIPROTKB|A5D7N7677 TMCO3 "Uncharacterized protein 0.486 0.323 0.285 4.2e-23
MGI|MGI:2444946678 Tmco3 "transmembrane and coile 0.486 0.323 0.255 3.7e-21
UNIPROTKB|E1BT78678 TMCO3 "Uncharacterized protein 0.486 0.323 0.268 1.3e-20
TIGR_CMR|CPS_1593 655 CPS_1593 "putative glutathione 0.393 0.270 0.324 1.6e-20
UNIPROTKB|Q6UWJ1677 TMCO3 "Transmembrane and coile 0.491 0.326 0.262 1.7e-20
TAIR|locus:2165326 KEA5 "K+ efflux antiporter 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 914 (326.8 bits), Expect = 1.1e-159, Sum P(2) = 1.1e-159
 Identities = 180/228 (78%), Positives = 200/228 (87%)

Query:   218 LCGAKLSEGVFVGSFLSMSSTAVVVKFLVEQNSNNALHGQVTIGTLILQDCAVGLLFALL 277
             LCGA+LSEG+FVG+FLSMSSTAVVVKFLVE+NS ++LHGQVTIG LI QDC VGLLFALL
Sbjct:   256 LCGARLSEGIFVGAFLSMSSTAVVVKFLVERNSTSSLHGQVTIGILIFQDCVVGLLFALL 315

Query:   278 PVLGGNSGLLQGMVSMGKLLLVLSIYLTVTSILSWSFVPRFLKLMIQLSSQTNELYQLAA 337
             PVLGGNSGLLQG++SMGKLLL+LSIYLTV S+L+WSFVPRFLKLMIQLSSQTNELYQLAA
Sbjct:   316 PVLGGNSGLLQGIISMGKLLLILSIYLTVASLLTWSFVPRFLKLMIQLSSQTNELYQLAA 375

Query:   338 VAFCLLSAWCSDKLGLSLELGSFMAGVMISTTDFAKHTLDQVEPIRNLFAALFLSSIGML 397
             VAFCLLSAWCSDKLGLSLELGSF+AGVM+STT+FA+HTL+QVEPIRNLFAALFLSSIGML
Sbjct:   376 VAFCLLSAWCSDKLGLSLELGSFVAGVMLSTTEFAQHTLEQVEPIRNLFAALFLSSIGML 435

Query:   398 IHVHFLWNHXXXXXXXXXXXXXXKTAVGTIVTKLFGYSMRTSFLVSWL 445
             I+VHFLWNH              KTA+  +V K F Y+MR SF V  L
Sbjct:   436 INVHFLWNHVDILLASVILVIVIKTAIAAVVVKAFRYNMRISFHVGVL 483
GO:0006812 "cation transport" evidence=IEA
GO:0006813 "potassium ion transport" evidence=ISS
GO:0015079 "potassium ion transmembrane transporter activity" evidence=ISS
GO:0015299 "solute:hydrogen antiporter activity" evidence=IEA
GO:0015386 "potassium:hydrogen antiporter activity" evidence=ISS;NAS
GO:0016021 "integral to membrane" evidence=IEA
GO:0055085 "transmembrane transport" evidence=IEA
GO:0006814 "sodium ion transport" evidence=RCA
GO:0010351 "lithium ion transport" evidence=RCA
TAIR|locus:2050382 KEA4 "K+ efflux antiporter 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2181910 KEA6 "K+ efflux antiporter 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|DET_1627 DET_1627 "sodium/hydrogen exchanger family protein" [Dehalococcoides ethenogenes 195 (taxid:243164)] Back     alignment and assigned GO terms
UNIPROTKB|F1RN34 TMCO3 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|A5D7N7 TMCO3 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
MGI|MGI:2444946 Tmco3 "transmembrane and coiled-coil domains 3" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|E1BT78 TMCO3 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
TIGR_CMR|CPS_1593 CPS_1593 "putative glutathione-regulated potassium-efflux system protein" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms
UNIPROTKB|Q6UWJ1 TMCO3 "Transmembrane and coiled-coil domain-containing protein 3" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8VYR9KEA5_ARATHNo assigned EC number0.73920.91330.7235yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh2_kg.8__1054__AT5G51710.1
annotation not avaliable (569 aa)
(Arabidopsis lyrata)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query450
pfam00999370 pfam00999, Na_H_Exchanger, Sodium/hydrogen exchang 6e-43
COG0475397 COG0475, KefB, Kef-type K+ transport systems, memb 4e-42
TIGR00932273 TIGR00932, 2a37, transporter, monovalent cation:pr 2e-30
COG4651408 COG4651, RosB, Kef-type K+ transport system, predi 7e-26
PRK03659 601 PRK03659, PRK03659, glutathione-regulated potassiu 2e-22
PRK10669 558 PRK10669, PRK10669, putative cation:proton antipor 6e-22
PRK03562 621 PRK03562, PRK03562, glutathione-regulated potassiu 1e-15
pfam09073424 pfam09073, BUD22, BUD22 3e-05
>gnl|CDD|216235 pfam00999, Na_H_Exchanger, Sodium/hydrogen exchanger family Back     alignment and domain information 
 Score =  154 bits (392), Expect = 6e-43
 Identities = 79/287 (27%), Positives = 141/287 (49%), Gaps = 26/287 (9%)

Query: 162 LQVDLRLISDLVVVIVSAAIGGIIFSCLGQPVIVGYLLAGSIIGPGGLKFISELVQLCGA 221
           L++DLR +      I+  A+ G++      P ++G LLA              L+   G 
Sbjct: 64  LELDLRELRKNGKSILLLALLGVLI-----PFLLGLLLA--------------LLGGLGI 104

Query: 222 KLSEGVFVGSFLSMSSTAVVVKFLVEQNSNNALHGQVTIGTLILQDCAVGLLFALLPVLG 281
            L E +  G+ LS +S  VV+  L E+   N   G + +G  +L D    +L A+L  L 
Sbjct: 105 PLLEALLFGAALSATSPVVVLAILKERGRLNTRLGTLILGESVLNDAVAVVLLAVLLALA 164

Query: 282 GNSGLLQGMVSMGKLLLVLSIYLTVTSILSWSFVPRFLKLMIQLSSQTNELYQLAAVAFC 341
           G  GL     S   LLL++ + + +  +L        L+L+ + +S   EL  L  +A  
Sbjct: 165 GVGGL-----SDLGLLLLIFLVVALGGLLLGLVFGWLLRLITRFTSGDRELEVLLVLALA 219

Query: 342 LLSAWCSDKLGLSLELGSFMAGVMISTTDFAKHTLDQVEPIRN-LFAALFLSSIGMLIHV 400
           LL+A  ++ LGLS  LG+F+AG+++S   FA    +++EP    LF  LF  S+G+ + +
Sbjct: 220 LLAALLAELLGLSGILGAFLAGLVLSNYAFANELSEKLEPFGYGLFLPLFFVSVGLSLDL 279

Query: 401 H-FLWNHVDILLASVILVIIVKTAVGTIVTKLFGYSMRTSFLVSWLP 446
              L + + ++L  ++ +++ K     ++ +L G S+R + +V +  
Sbjct: 280 SSLLLSLLLLVLLLLVAILLGKLLGVFLLARLLGLSLREALIVGFGG 326

Na/H antiporters are key transporters in maintaining the pH of actively metabolising cells. The molecular mechanisms of antiport are unclear. These antiporters contain 10-12 transmembrane regions (M) at the amino-terminus and a large cytoplasmic region at the carboxyl terminus. The transmembrane regions M3-M12 share identity with other members of the family. The M6 and M7 regions are highly conserved. Thus, this is thought to be the region that is involved in the transport of sodium and hydrogen ions. The cytoplasmic region has little similarity throughout the family. Length = 370
>gnl|CDD|223551 COG0475, KefB, Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|233195 TIGR00932, 2a37, transporter, monovalent cation:proton antiporter-2 (CPA2) family Back     alignment and domain information
>gnl|CDD|226998 COG4651, RosB, Kef-type K+ transport system, predicted NAD-binding component [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|179625 PRK03659, PRK03659, glutathione-regulated potassium-efflux system protein KefB; Provisional Back     alignment and domain information
>gnl|CDD|182633 PRK10669, PRK10669, putative cation:proton antiport protein; Provisional Back     alignment and domain information
>gnl|CDD|235131 PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional Back     alignment and domain information
>gnl|CDD|220102 pfam09073, BUD22, BUD22 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 450
PRK03562 621 glutathione-regulated potassium-efflux system prot 100.0
COG0475397 KefB Kef-type K+ transport systems, membrane compo 100.0
PRK03659 601 glutathione-regulated potassium-efflux system prot 100.0
PRK10669 558 putative cation:proton antiport protein; Provision 100.0
COG4651408 RosB Kef-type K+ transport system, predicted NAD-b 100.0
PLN03159 832 cation/H(+) antiporter 15; Provisional 100.0
TIGR00932273 2a37 transporter, monovalent cation:proton antipor 99.97
PRK05326 562 potassium/proton antiporter; Reviewed 99.96
PF00999380 Na_H_Exchanger: Sodium/hydrogen exchanger family; 99.94
KOG1650 769 consensus Predicted K+/H+-antiporter [Inorganic io 99.92
TIGR00831 525 a_cpa1 Na+/H+ antiporter, bacterial form. This mod 99.8
TIGR00844 810 c_cpa1 na(+)/h(+) antiporter. This model is specif 99.79
COG0025429 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorg 99.73
TIGR00840 559 b_cpa1 sodium/hydrogen exchanger 3. This model is 99.61
COG3263 574 NhaP-type Na+/H+ and K+/H+ antiporters with a uniq 99.59
PRK14853423 nhaA pH-dependent sodium/proton antiporter; Provis 99.11
KOG1965 575 consensus Sodium/hydrogen exchanger protein [Inorg 99.11
KOG4505467 consensus Na+/H+ antiporter [Inorganic ion transpo 99.0
TIGR00773373 NhaA Na+/H+ antiporter NhaA. These proteins are me 98.49
PRK14856438 nhaA pH-dependent sodium/proton antiporter; Provis 97.16
KOG1966 670 consensus Sodium/hydrogen exchanger protein [Inorg 97.07
PRK09560389 nhaA pH-dependent sodium/proton antiporter; Review 97.07
PRK09561388 nhaA pH-dependent sodium/proton antiporter; Review 96.86
PRK14854383 nhaA pH-dependent sodium/proton antiporter; Provis 96.73
PRK03562 621 glutathione-regulated potassium-efflux system prot 96.7
PF06965378 Na_H_antiport_1: Na+/H+ antiporter 1; InterPro: IP 96.49
PRK14855423 nhaA pH-dependent sodium/proton antiporter; Provis 96.39
TIGR00932 273 2a37 transporter, monovalent cation:proton antipor 96.37
PRK03659 601 glutathione-regulated potassium-efflux system prot 96.28
COG0786404 GltS Na+/glutamate symporter [Amino acid transport 96.2
COG3004390 NhaA Na+/H+ antiporter [Inorganic ion transport an 96.06
COG0475 397 KefB Kef-type K+ transport systems, membrane compo 96.03
PRK05326 562 potassium/proton antiporter; Reviewed 95.93
PF05684378 DUF819: Protein of unknown function (DUF819); Inte 95.87
TIGR00831 525 a_cpa1 Na+/H+ antiporter, bacterial form. This mod 95.87
TIGR00844 810 c_cpa1 na(+)/h(+) antiporter. This model is specif 95.71
PRK10669 558 putative cation:proton antiport protein; Provision 95.49
TIGR00210398 gltS sodium--glutamate symport carrier (gltS). 93.76
PF03601 305 Cons_hypoth698: Conserved hypothetical protein 698 93.25
COG2855 334 Predicted membrane protein [Function unknown] 92.94
TIGR00783347 ccs citrate carrier protein, CCS family. These pro 92.79
PLN03159 832 cation/H(+) antiporter 15; Provisional 91.89
PF00999 380 Na_H_Exchanger: Sodium/hydrogen exchanger family; 91.18
COG0025 429 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorg 91.08
PRK12460312 2-keto-3-deoxygluconate permease; Provisional 90.54
TIGR00698 335 conserved hypothetical integral membrane protein. 90.32
TIGR03082156 Gneg_AbrB_dup membrane protein AbrB duplication. T 88.6
COG4651 408 RosB Kef-type K+ transport system, predicted NAD-b 86.78
PF03956191 DUF340: Membrane protein of unknown function (DUF3 83.68
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional Back     alignment and domain information 
Probab=100.00  E-value=4.2e-39  Score=351.23  Aligned_cols=283  Identities=22%  Similarity=0.355  Sum_probs=244.8

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHhhCcCCccchhhH------HH--------------------
Q 013078          164 VDLRLISDLVVVIVSAAIGGIIFSCLGQPVIVGYLLAGSIIGPGGLKFISEL------VQ--------------------  217 (450)
Q Consensus       164 ~d~~li~~l~iilv~a~i~g~l~~rlglP~ivGyIlaGilLGPsgL~~I~~l------~q--------------------  217 (450)
                      .|++++.++.+++.++.+++++++|+|+|+++|||++|+++||++++++++.      .|                    
T Consensus         2 ~~~~~l~~~~~~l~~a~i~~~l~~rl~lp~vlgyilaGillGP~~lg~i~~~~~i~~laelGvv~LlF~iGLEl~~~~l~   81 (621)
T PRK03562          2 MDSHTLIQALIYLGAAVLIVPIAVRLGLGSVLGYLIAGCIIGPWGLRLVTDVESILHFAEFGVVLMLFVIGLELDPQRLW   81 (621)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHhCcccccCCCCHHHHHHHHHHHHHHHHHHHHhCcCHHHHH
Confidence            4677999999999999999999999999999999999999999999987531      11                    


Q ss_pred             --------------------------HhcCchHHHHHHHHHhhhccHHHHHHHHHhcccCCcchhHHHHHHHHHHHHHHH
Q 013078          218 --------------------------LCGAKLSEGVFVGSFLSMSSTAVVVKFLVEQNSNNALHGQVTIGTLILQDCAVG  271 (450)
Q Consensus       218 --------------------------l~G~~~~~al~iG~~Ls~TStaVV~~iL~e~~~~~s~~g~lilg~avl~Dv~~i  271 (450)
                                                ++|++|..++++|.+++.|||++++++++|++..++++||.+++++++||+.++
T Consensus        82 ~~~~~~~~~g~~qv~~~~~~~~~~~~~~g~~~~~al~ig~~la~SStaiv~~~L~e~~~l~t~~G~~~l~~ll~~Dl~~i  161 (621)
T PRK03562         82 KLRRSIFGGGALQMVACGGLLGLFCMLLGLRWQVALLIGLGLALSSTAIAMQAMNERNLMVTQMGRSAFAILLFQDIAAI  161 (621)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccccCchHHHHHHHHHHHHHHHH
Confidence                                      457889999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHHh
Q 013078          272 LLFALLPVLGGNSGLLQGMVSMGKLLLVLSIYLTVTSILSWSFVPRFLKLMIQLSSQTNELYQLAAVAFCLLSAWCSDKL  351 (450)
Q Consensus       272 lllall~~L~~~~~~~~~~~sl~~~ll~l~~fl~v~~lv~~~l~~~l~~~l~~~~~~~~El~ll~~lal~ll~~~iae~l  351 (450)
                      +++++++.++..+... ........+...++++++.++++||+.+|+++|+.+.  +++|.+...++.++++++++++.+
T Consensus       162 ~ll~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~l~~~l~~~~~~~--~~~e~~~~~~l~lv~~~a~la~~~  238 (621)
T PRK03562        162 PLVAMIPLLAASGAST-TLGAFALSALKVAGALALVVLGGRYVTRPALRFVARS--GLREVFTAVALFLVFGFGLLMEEV  238 (621)
T ss_pred             HHHHHHHHHccCCCcc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--CCchHHHHHHHHHHHHHHHHHHHh
Confidence            9999998876532110 1111112222223334445667889999999998764  468888888889999999999999


Q ss_pred             chhHHHHHHHHHHHhcCCcchhhHHHhhhcHHHHHHHHHHHHHhhccchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 013078          352 GLSLELGSFMAGVMISTTDFAKHTLDQVEPIRNLFAALFLSSIGMLIHVHFLWNHVDILLASVILVIIVKTAVGTIVTKL  431 (450)
Q Consensus       352 Gls~~LGAFlAGl~ls~~~~~~~l~~~ie~i~~~F~plFF~sIG~~id~~~l~~~~~~ll~lv~~~vv~K~l~~~l~~~~  431 (450)
                      |+|+++|||+||+++++.++++++++.++|++++|.|+||+++||++|+..+..+|+.++.+++..+++|++++++.+++
T Consensus       239 Gls~~lGAFlAGl~l~~~~~~~~le~~i~pf~~lll~lFFi~vG~~id~~~l~~~~~~il~~~~~~~~~K~~~~~~~~~~  318 (621)
T PRK03562        239 GLSMALGAFLAGVLLASSEYRHALESDIEPFKGLLLGLFFIAVGMSIDFGTLLENPLRILILLLGFLAIKIAMLWLLARP  318 (621)
T ss_pred             CccHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999988888777777778899999999999999


Q ss_pred             cCCChHHHHHHhccCCCC
Q 013078          432 FGYSMRTSFLVSWLPKLM  449 (450)
Q Consensus       432 ~g~~~r~a~~vGl~La~m  449 (450)
                      +|+++++++.+|+.|+|.
T Consensus       319 ~g~~~~~a~~~gl~L~~~  336 (621)
T PRK03562        319 LGVPRKQRRWFAVLLGQG  336 (621)
T ss_pred             hCCCHhHHHHHHHHHhcc
Confidence            999999999999999984

>COG0475 KefB Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional Back     alignment and domain information
>PRK10669 putative cation:proton antiport protein; Provisional Back     alignment and domain information
>COG4651 RosB Kef-type K+ transport system, predicted NAD-binding component [Inorganic ion transport and metabolism] Back     alignment and domain information
>PLN03159 cation/H(+) antiporter 15; Provisional Back     alignment and domain information
>TIGR00932 2a37 transporter, monovalent cation:proton antiporter-2 (CPA2) family Back     alignment and domain information
>PRK05326 potassium/proton antiporter; Reviewed Back     alignment and domain information
>PF00999 Na_H_Exchanger: Sodium/hydrogen exchanger family; InterPro: IPR006153 Sodium proton exchangers (NHEs) constitute a large family of integral membrane protein transporters that are responsible for the counter-transport of protons and sodium ions across lipid bilayers [, ] Back     alignment and domain information
>KOG1650 consensus Predicted K+/H+-antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00831 a_cpa1 Na+/H+ antiporter, bacterial form Back     alignment and domain information
>TIGR00844 c_cpa1 na(+)/h(+) antiporter Back     alignment and domain information
>COG0025 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00840 b_cpa1 sodium/hydrogen exchanger 3 Back     alignment and domain information
>COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK14853 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>KOG1965 consensus Sodium/hydrogen exchanger protein [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG4505 consensus Na+/H+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00773 NhaA Na+/H+ antiporter NhaA Back     alignment and domain information
>PRK14856 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>KOG1966 consensus Sodium/hydrogen exchanger protein [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK09560 nhaA pH-dependent sodium/proton antiporter; Reviewed Back     alignment and domain information
>PRK09561 nhaA pH-dependent sodium/proton antiporter; Reviewed Back     alignment and domain information
>PRK14854 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional Back     alignment and domain information
>PF06965 Na_H_antiport_1: Na+/H+ antiporter 1; InterPro: IPR004670 NhaA is a sodium ion/proton antiporter that uses the proton electrochemical gradient to expel sodium ions from the cytoplasm and functions primarily in the adaptation to high salinity at alkaline pH Back     alignment and domain information
>PRK14855 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>TIGR00932 2a37 transporter, monovalent cation:proton antiporter-2 (CPA2) family Back     alignment and domain information
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional Back     alignment and domain information
>COG0786 GltS Na+/glutamate symporter [Amino acid transport and metabolism] Back     alignment and domain information
>COG3004 NhaA Na+/H+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG0475 KefB Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK05326 potassium/proton antiporter; Reviewed Back     alignment and domain information
>PF05684 DUF819: Protein of unknown function (DUF819); InterPro: IPR008537 This family contains proteins of unknown function from archaeal, bacterial and plant species Back     alignment and domain information
>TIGR00831 a_cpa1 Na+/H+ antiporter, bacterial form Back     alignment and domain information
>TIGR00844 c_cpa1 na(+)/h(+) antiporter Back     alignment and domain information
>PRK10669 putative cation:proton antiport protein; Provisional Back     alignment and domain information
>TIGR00210 gltS sodium--glutamate symport carrier (gltS) Back     alignment and domain information
>PF03601 Cons_hypoth698: Conserved hypothetical protein 698; InterPro: IPR018383 This entry represents a family of uncharacterised multi-pass membrane proteins Back     alignment and domain information
>COG2855 Predicted membrane protein [Function unknown] Back     alignment and domain information
>TIGR00783 ccs citrate carrier protein, CCS family Back     alignment and domain information
>PLN03159 cation/H(+) antiporter 15; Provisional Back     alignment and domain information
>PF00999 Na_H_Exchanger: Sodium/hydrogen exchanger family; InterPro: IPR006153 Sodium proton exchangers (NHEs) constitute a large family of integral membrane protein transporters that are responsible for the counter-transport of protons and sodium ions across lipid bilayers [, ] Back     alignment and domain information
>COG0025 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK12460 2-keto-3-deoxygluconate permease; Provisional Back     alignment and domain information
>TIGR00698 conserved hypothetical integral membrane protein Back     alignment and domain information
>TIGR03082 Gneg_AbrB_dup membrane protein AbrB duplication Back     alignment and domain information
>COG4651 RosB Kef-type K+ transport system, predicted NAD-binding component [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF03956 DUF340: Membrane protein of unknown function (DUF340); InterPro: IPR005642 Members of this family contain a conserved core of four predicted transmembrane segments Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query450
1zcd_A388 Na(+)/H(+) antiporter 1; membrane protein; 3.45A { 99.36
>1zcd_A Na(+)/H(+) antiporter 1; membrane protein; 3.45A {Escherichia coli} PDB: 3fi1_A Back     alignment and structure
Probab=99.36  E-value=2.6e-12  Score=131.88  Aligned_cols=247  Identities=17%  Similarity=0.120  Sum_probs=155.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHH--------HhcCCcHHHHHHHHHHhhCcCCccchhhHHHHhcCchHHHHHHHHHhhhccH
Q 013078          167 RLISDLVVVIVSAAIGGIIF--------SCLGQPVIVGYLLAGSIIGPGGLKFISELVQLCGAKLSEGVFVGSFLSMSST  238 (450)
Q Consensus       167 ~li~~l~iilv~a~i~g~l~--------~rlglP~ivGyIlaGilLGPsgL~~I~~l~ql~G~~~~~al~iG~~Ls~TSt  238 (450)
                      +++.|-...+++=...=++=        ++.+.-......-.|=++-|..+..      .++....++.....+...|+.
T Consensus        61 ~windglm~lFff~vGLEik~e~l~G~L~~~~~a~~p~~aAlgGmivP~~iy~------~~~~~~~~~~~gw~ip~ATdI  134 (388)
T 1zcd_A           61 LWINDALMAVFFLLVGLEVKRELMQGSLASLRQAAFPVIAAIGGMIVPALLYL------AFNYADPITREGWAIPAATDI  134 (388)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHSTTTSSTTTSHHHHHHHHHHTTTTHHHHG------GGCCSSTTHHHHTSSSSCCCH
T ss_pred             HHHhhHhHHHHHHHHHHHhhHHHhcchhhhhhhHHHHHHHHHHHHHHHHHHHH------HHhcCChhhhhhhHHHHHHHH
Confidence            46777666555544443441        2233322223334455556655432      134444556667777889999


Q ss_pred             HHHHHHHHhcccCC-cchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Q 013078          239 AVVVKFLVEQNSNN-ALHGQVTIGTLILQDCAVGLLFALLPVLGGNSGLLQGMVSMGKLLLVLSIYLTVTSILSWSFVPR  317 (450)
Q Consensus       239 aVV~~iL~e~~~~~-s~~g~lilg~avl~Dv~~illlall~~L~~~~~~~~~~~sl~~~ll~l~~fl~v~~lv~~~l~~~  317 (450)
                      +..+.++...+... +..++.+++.+++||+.+++++|++..   ++.   .+..+.   .. ++.+++.     +    
T Consensus       135 Afal~vL~~lg~~~p~~l~~flLalAvvDDl~aiivIAvfyt---~~~---~~~~l~---~~-~~~~~~~-----~----  195 (388)
T 1zcd_A          135 AFALGVLALLGSRVPLALKIFLMALAIIDDLGAIIIIALFYT---NDL---SMASLG---VA-AVAIAVL-----A----  195 (388)
T ss_dssp             HHHHHHHHSSCSSSCSSSHHHHHHHHHHHHHHHHHHHHHHSC---CCC---CHHHHH---HH-HHHHHHH-----H----
T ss_pred             HHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHHHHc---CCc---cHHHHH---HH-HHHHHHH-----H----
Confidence            99999999987654 445589999999999999999998742   221   122111   11 1111111     1    


Q ss_pred             HHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHhcCC-----cchhhHHHhhhcHHH-HHHHHH-
Q 013078          318 FLKLMIQLSSQTNELYQLAAVAFCLLSAWCSDKLGLSLELGSFMAGVMISTT-----DFAKHTLDQVEPIRN-LFAALF-  390 (450)
Q Consensus       318 l~~~l~~~~~~~~El~ll~~lal~ll~~~iae~lGls~~LGAFlAGl~ls~~-----~~~~~l~~~ie~i~~-~F~plF-  390 (450)
                      ++   .|.  +.++......+  ++...+.+++.|+|+.+|+|++|++++..     ...++++|+++|+.. +++|+| 
T Consensus       196 ~l---~r~--~v~~~~~y~~l--gl~~w~~~~~sGvHatigg~l~Gl~ip~~~~~~~~~~~~le~~l~p~v~~~ilPlFa  268 (388)
T 1zcd_A          196 VL---NLC--GARRTGVYILV--GVVLWTAVLKSGVHATLAGVIVGFFIPLKEKHGRSPAKRLEHVLHPWVAYLILPLFA  268 (388)
T ss_dssp             HH---HHT--TCCCTHHHHHH--HHHHHHHTTTSHHHHHHHHHHHHHHSCCCGGGSSCHHHHHHHHHHHHHHHTHHHHHH
T ss_pred             HH---HHh--cchhHHHHHHH--HHHHHHHHHHhCccHHHHHHHHHHhccCCCccCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            11   111  12222222222  23344566999999999999999999985     246789999999975 889999 


Q ss_pred             HHHHhhccchh---hHhHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CCChHHHHHHhccCC
Q 013078          391 LSSIGMLIHVH---FLWNHVDILLASVILVIIVKTAVGTIVTKLF----------GYSMRTSFLVSWLPK  447 (450)
Q Consensus       391 F~sIG~~id~~---~l~~~~~~ll~lv~~~vv~K~l~~~l~~~~~----------g~~~r~a~~vGl~La  447 (450)
                      |+..|.++|..   .+.+.  ..+.+++..+++|+++++..++..          |++|||...+|+.+.
T Consensus       269 FanaGv~l~~~~~~~l~~~--~~lgi~~glvvGK~~Gi~~~~~l~~rl~~~~lp~g~~~~~~~~vg~L~g  336 (388)
T 1zcd_A          269 FANAGVSLQGVTLDGLTSI--LPLGIIAGLLIGKPLGISLFCWLALRLKLAHLPEGTTYQQIMVVGILCG  336 (388)
T ss_dssp             HHHCCCCCSSSCCCTHHHH--SSTTTTHHHHHTTGGGSTTHHHHTSSCTTTCCCCSCCGGGGTTHHHHTT
T ss_pred             HHhcCeeecccchhhccCh--HHHHHHHHHHHHHHHHHHHHHHHHHHhccCcCCCCCCHHHHHHHHHHhc
Confidence            99999999974   33221  123444456899988855555554          999999988777654

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00