Citrus Sinensis ID: 013127
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 449 | ||||||
| 224100051 | 460 | predicted protein [Populus trichocarpa] | 1.0 | 0.976 | 0.715 | 0.0 | |
| 225425873 | 443 | PREDICTED: uncharacterized protein LOC10 | 0.984 | 0.997 | 0.726 | 1e-180 | |
| 356512353 | 458 | PREDICTED: uncharacterized protein LOC10 | 0.984 | 0.965 | 0.631 | 1e-167 | |
| 356525140 | 466 | PREDICTED: uncharacterized protein LOC10 | 0.984 | 0.948 | 0.622 | 1e-166 | |
| 255547816 | 433 | conserved hypothetical protein [Ricinus | 0.902 | 0.935 | 0.709 | 1e-165 | |
| 356569192 | 452 | PREDICTED: uncharacterized protein LOC10 | 0.973 | 0.966 | 0.632 | 1e-162 | |
| 449450377 | 444 | PREDICTED: uncharacterized protein LOC10 | 0.984 | 0.995 | 0.618 | 1e-161 | |
| 18408800 | 456 | uncharacterized protein [Arabidopsis tha | 0.975 | 0.960 | 0.642 | 1e-159 | |
| 21536729 | 456 | unknown [Arabidopsis thaliana] | 0.975 | 0.960 | 0.642 | 1e-159 | |
| 297838499 | 452 | predicted protein [Arabidopsis lyrata su | 0.975 | 0.969 | 0.644 | 1e-158 |
| >gi|224100051|ref|XP_002311725.1| predicted protein [Populus trichocarpa] gi|222851545|gb|EEE89092.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 660 bits (1703), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/460 (71%), Positives = 374/460 (81%), Gaps = 11/460 (2%)
Query: 1 MADPH-IQIQTD-PPPAQTPLL-----NNSNQNHTQLP----QQQQQENQIPETDLDRTL 49
MAD H I QT+ PP TPLL NN N N P QQQ Q P ++++ L
Sbjct: 1 MADAHVIHFQTEHQPPPHTPLLDDDDTNNKNSNSKSTPNHNPQQQNQGISFPNQNINQAL 60
Query: 50 QKLEYFLTFLGFNHSSVLSFVLSWTAFVVTGVLVPVVILELSNCPGCEKGQIKDFELCIV 109
+KLE +L+FLGFN SS+ SF+LSW AF++ GVL+PV +LELS C GC+K QIKDFEL IV
Sbjct: 61 EKLEAYLSFLGFNQSSLKSFLLSWAAFLLVGVLLPVALLELSQCSGCDKYQIKDFELDIV 120
Query: 110 ASQACLAAISLICMSHNLRKYGIRKFLFVDRHSGHMERFHYQYIQQIKDSLRLLILWSLP 169
ASQACLAA+SLIC+SHNLRKYGIRKFLFVDR GH+ RF YI+QIKDSLRLLILWSLP
Sbjct: 121 ASQACLAAVSLICLSHNLRKYGIRKFLFVDRFGGHISRFSLLYIRQIKDSLRLLILWSLP 180
Query: 170 CFILKTAREIIRILYVHHESWWQSAAILFALILSWTYLSTISLSASILFHVVCNLQVMHF 229
CFILK ARE IR+ YV HESW S A+L LI+SW+Y+STISLSASILFH++CNLQV+HF
Sbjct: 181 CFILKVAREAIRVSYVRHESWLMSTAVLIGLIISWSYVSTISLSASILFHLICNLQVIHF 240
Query: 230 DDYAKLLAMESDVVVLIEEHMRLRYHLSKISHRFRIYLLLEFLVVTASQIVSLFQTTGYG 289
+DYAKLL + DV+V IEEH RLRYHLSKISHRFRI+L+L+F VVTASQ V+LF+ TGY
Sbjct: 241 EDYAKLLERDCDVLVFIEEHTRLRYHLSKISHRFRIFLILQFCVVTASQFVTLFRITGYR 300
Query: 290 GKITFINGGDFAASSVVQVVGIILCLHAATKISHRAQNIASIASRWHALATCSSGDSSQL 349
G IT INGGDFA SS VQVVGIILCLHAATKISHRA IASIASRWHALATC D+SQL
Sbjct: 301 GIITGINGGDFAVSSTVQVVGIILCLHAATKISHRALGIASIASRWHALATCGQNDTSQL 360
Query: 350 RVSNSFGNLEASSPLNSVHMNYSESDLVSLDYVAMPTNTQLASYMCSYHRRQAYVMYLQA 409
RVSNS GNLEA++ NS +NYSESDL S DY+AMPTN QLASYM SYH+RQA+V+YLQ
Sbjct: 361 RVSNSTGNLEAANLQNSARINYSESDLESFDYIAMPTNMQLASYMTSYHKRQAFVLYLQN 420
Query: 410 NPGGITIFGWTVDRALINTIFFIELSLVTFVLGKTIVNSN 449
NPGGITIFGWTVDR LINTIFFIELSL+TFVLGKTIV S+
Sbjct: 421 NPGGITIFGWTVDRGLINTIFFIELSLITFVLGKTIVFSS 460
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225425873|ref|XP_002266342.1| PREDICTED: uncharacterized protein LOC100240965 [Vitis vinifera] gi|297738355|emb|CBI27556.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|356512353|ref|XP_003524884.1| PREDICTED: uncharacterized protein LOC100793058 [Glycine max] | Back alignment and taxonomy information |
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| >gi|356525140|ref|XP_003531185.1| PREDICTED: uncharacterized protein LOC100813872 [Glycine max] | Back alignment and taxonomy information |
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| >gi|255547816|ref|XP_002514965.1| conserved hypothetical protein [Ricinus communis] gi|223546016|gb|EEF47519.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|356569192|ref|XP_003552789.1| PREDICTED: uncharacterized protein LOC100796689 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|449450377|ref|XP_004142939.1| PREDICTED: uncharacterized protein LOC101221462 [Cucumis sativus] gi|449494462|ref|XP_004159552.1| PREDICTED: uncharacterized protein LOC101223780 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|18408800|ref|NP_564899.1| uncharacterized protein [Arabidopsis thaliana] gi|332196544|gb|AEE34665.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|21536729|gb|AAM61061.1| unknown [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|297838499|ref|XP_002887131.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297332972|gb|EFH63390.1| predicted protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 449 | ||||||
| TAIR|locus:2008828 | 456 | AT1G67570 "AT1G67570" [Arabido | 0.897 | 0.883 | 0.670 | 1.7e-139 | |
| TAIR|locus:2008046 | 453 | AT1G50630 [Arabidopsis thalian | 0.881 | 0.874 | 0.313 | 5.5e-54 | |
| TAIR|locus:2092424 | 452 | AT3G20300 [Arabidopsis thalian | 0.873 | 0.867 | 0.313 | 2.4e-53 | |
| TAIR|locus:2132045 | 437 | MRB1 "AT4G22270" [Arabidopsis | 0.861 | 0.885 | 0.316 | 6.7e-49 | |
| TAIR|locus:2141481 | 453 | AT4G03820 "AT4G03820" [Arabido | 0.879 | 0.871 | 0.288 | 1.9e-42 | |
| TAIR|locus:2047032 | 414 | AT2G21080 "AT2G21080" [Arabido | 0.679 | 0.736 | 0.281 | 4.6e-42 |
| TAIR|locus:2008828 AT1G67570 "AT1G67570" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1365 (485.6 bits), Expect = 1.7e-139, P = 1.7e-139
Identities = 273/407 (67%), Positives = 324/407 (79%)
Query: 44 DLDRTLQKLEYFLTFLGFNHSSVLSFVLSWTAFXXXXXXXXXXILELSNCPGCEKGQIKD 103
DLDRTL+ LE FLT LGFN SS S VLSW F +LEL +C GCE+ Q K
Sbjct: 46 DLDRTLEWLETFLTLLGFNQSSKQSLVLSWIVFLSIGLVLPVTVLELGHCLGCERYQYKS 105
Query: 104 FELCIVASQACLAAISLICMSHNLRKYGIRKFLFVDRHSGHMERFHYQYIQQIKDSLRLL 163
FEL IV SQA LA +SL+C+SHNLRK+GIRKFLFVD+ SG M+R QYIQQI +S+RLL
Sbjct: 106 FELNIVVSQALLAGVSLLCVSHNLRKHGIRKFLFVDQLSGRMDRLKAQYIQQILNSVRLL 165
Query: 164 ILWSLPCFILKTAREIIRILYVHHESWWQSAAILFALILSWTYLSTISLSASILFHVVCN 223
+WSLPCF LK REIIR+ YV H+ W S AIL ++ILSWTYLSTI L+AS +FH+VCN
Sbjct: 166 AVWSLPCFALKGVREIIRMYYVPHDQPWLSVAILLSMILSWTYLSTIFLAASAMFHLVCN 225
Query: 224 LQVMHFDDYAKLLAMESDVVVLIEEHMRLRYHLSKISHRFRIYLLLEFLVVTASQIVSLF 283
LQV+HF+DYAKLL ES++ + I EHMRLR++LSKISHRFRI+LLL+FLVVTASQ +LF
Sbjct: 226 LQVIHFEDYAKLLEGESEISLFIYEHMRLRHYLSKISHRFRIFLLLQFLVVTASQFTTLF 285
Query: 284 QTTGYGGKITFINGGDFAASSVVQVVGIILCLHAATKISHRAQNIASIASRWHALATCSS 343
QTT Y G+IT+INGGDFA S+VVQVVGIILCLHAATKISHRAQ IAS+ASRWHA+ +CSS
Sbjct: 286 QTTAYSGRITYINGGDFAVSAVVQVVGIILCLHAATKISHRAQAIASVASRWHAMMSCSS 345
Query: 344 GDSSQLRVSNSFGNLEASS-PLNSVHMNYSESDLVSLD-YVAMPTNTQLASYMC--SYHR 399
DS+Q+R S S +LEA++ P S ++ S+SD+ S+D Y+ MP Q SYM SYH+
Sbjct: 346 TDSTQIRASPSGVHLEATTNPPISFPISRSDSDVESMDHYMRMPVTNQFPSYMSMSSYHK 405
Query: 400 RQAYVMYLQANPGGITIFGWTVDRALINTIFFIELSLVTFVLGKTIV 446
RQA+V+YLQ NPGGITIFGWTVDR LINTIFFIELSLVTFVLGKT+V
Sbjct: 406 RQAFVLYLQMNPGGITIFGWTVDRHLINTIFFIELSLVTFVLGKTVV 452
|
|
| TAIR|locus:2008046 AT1G50630 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2092424 AT3G20300 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2132045 MRB1 "AT4G22270" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2141481 AT4G03820 "AT4G03820" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2047032 AT2G21080 "AT2G21080" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00035091001 | SubName- Full=Chromosome chr1 scaffold_75, whole genome shotgun sequence; (443 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 449 | |||
| pfam12056 | 398 | pfam12056, DUF3537, Protein of unknown function (D | 1e-150 |
| >gnl|CDD|221398 pfam12056, DUF3537, Protein of unknown function (DUF3537) | Back alignment and domain information |
|---|
Score = 431 bits (1111), Expect = e-150
Identities = 155/394 (39%), Positives = 228/394 (57%), Gaps = 11/394 (2%)
Query: 49 LQKLEYFLTFLGFNHSSVLSFVLSWTAFVVTGVLVPVVILELSNCPGCEKGQIKDFELCI 108
L+ L ++ F+HSS LSW+ F + V VP + L C C+ + F++ +
Sbjct: 6 LRSFRSLLRWVCFDHSSPCGAALSWSVFFLLAVAVPAISHFLLPCRDCDFDHRRPFDVLV 65
Query: 109 VASQACLAAISLICMSHNLRKYGIRKFLFVDRHSGHMERFHYQYIQQIKDSLRLLILWSL 168
S + AA+S +C+S RKYG+RKFLF+D+ S +R Y +IK S RLL + L
Sbjct: 66 QLSLSAFAAVSFLCLSRWFRKYGLRKFLFLDKLSDDSDRVRLGYTAEIKRSFRLLAYFVL 125
Query: 169 PCFILKTAREI-------IRILYVHHESWWQSAAILFALILSWTYLSTISLSASILFHVV 221
PCF+L+ +I +I ++ + S A L SW Y +TI L +LF ++
Sbjct: 126 PCFLLEAVYKIWWYASGGSQIPFIGNPVLSLSVACTLEL-ASWMYRTTIFLLVCVLFRLI 184
Query: 222 CNLQVMHFDDYAKLLAMESDVVVLIEEHMRLRYHLSKISHRFRIYLLLEFLVVTASQIVS 281
C+LQ++ DD+AKL ESDV +++EH+R+R LS ISHRFR ++LL L+VTASQ +
Sbjct: 185 CHLQILRLDDFAKLFEGESDVESVLKEHLRIRRQLSIISHRFRKFILLSLLLVTASQFAA 244
Query: 282 LFQTTGYGGKITFINGGDFAASSVVQVVGIILCLHAATKISHRAQNIASIASRWHALATC 341
L TT G++ +NGG+ A SVV V G+ +CLH+A KI+H+AQ + S+AS+WHA ATC
Sbjct: 245 LLLTTAASGEVNILNGGELALCSVVLVSGLFICLHSAAKITHKAQAVTSLASKWHACATC 304
Query: 342 SSGDSSQLRVSNSFGNLEASSPLNSVHMNYSESDLVSLD-YVAMPTNTQLASY--MCSYH 398
SS D++ S AS+ + + S S S D + + SY S+
Sbjct: 305 SSFDTTVDETPTSVLLPAASNLVLRPVSSSSSSSDESGDEEDDLDNTKIMPSYARTISFQ 364
Query: 399 RRQAYVMYLQANPGGITIFGWTVDRALINTIFFI 432
+RQA V YL+ N GIT++G+TVDR ++TIF I
Sbjct: 365 KRQALVTYLENNRAGITVYGFTVDRTWLHTIFMI 398
|
This family of transmembrane proteins are functionally uncharacterized. This protein is found in eukaryotes. Proteins in this family are typically between 427 to 453 amino acids in length. Length = 398 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 449 | |||
| PF12056 | 398 | DUF3537: Protein of unknown function (DUF3537); In | 100.0 | |
| PF08395 | 372 | 7tm_7: 7tm Chemosensory receptor; InterPro: IPR013 | 97.41 | |
| PF02949 | 313 | 7tm_6: 7tm Odorant receptor; InterPro: IPR004117 A | 90.11 |
| >PF12056 DUF3537: Protein of unknown function (DUF3537); InterPro: IPR021924 This family of transmembrane proteins are functionally uncharacterised | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-166 Score=1245.40 Aligned_cols=387 Identities=47% Similarity=0.755 Sum_probs=354.8
Q ss_pred hHHHHhHHHHhhhheecCCCchhhHHHHHHHHHHHHHHhhhhhhhcCCCCCCccCCccchhHHHHHhhHHHHHHHHHhhh
Q 013127 46 DRTLQKLEYFLTFLGFNHSSVLSFVLSWTAFVVTGVLVPVVILELSNCPGCEKGQIKDFELCIVASQACLAAISLICMSH 125 (449)
Q Consensus 46 ~deLr~fr~~L~w~~ldqSs~~~~~~Sw~~F~~l~v~vP~~~~~~~~c~~cd~~~~~~f~~~Vq~s~s~lAavsf~cLS~ 125 (449)
+||||+||++|+|||+||||++++++||++|+++|++||++++++++|++||++|++|||++||+|||++|+|||+||||
T Consensus 3 ~deL~~fr~~L~w~~~dqSs~~~~~~Sw~~F~ll~v~vP~~~~~~~~c~~cd~~~~~~f~~~Vq~s~s~lAavsf~cLS~ 82 (398)
T PF12056_consen 3 RDELRSFRSFLRWCGLDQSSPLSAALSWSVFLLLAVAVPAASHFLLSCPSCDKYHIRPFEKLVQLSQSALAAVSFLCLSH 82 (398)
T ss_pred hhHHHHHHHHHHHhhccCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhcCCCchhHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhccceeeeccccCchhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhheeeeeecccchh------HHHHHHHH
Q 013127 126 NLRKYGIRKFLFVDRHSGHMERFHYQYIQQIKDSLRLLILWSLPCFILKTAREIIRILYVHHESWW------QSAAILFA 199 (449)
Q Consensus 126 ~~rkyGLRr~LflD~l~~~s~~vr~gY~~~l~~sfrlLa~~vLPcf~~e~a~ki~w~~~~~~~~p~------~s~~~l~~ 199 (449)
|+||||+|||||+||++|||++||+||++||++|||+|++|+||||++|+|||||||+++..++|+ |..+.+++
T Consensus 83 ~~rkyGlRr~LflD~l~~~s~~vr~gY~~~l~~sfrlLa~~vLPcf~~e~~~ki~~~~~~~~~~P~~~~~~~~~sva~~l 162 (398)
T PF12056_consen 83 FLRKYGLRRFLFLDKLRDDSEEVRRGYTRQLNRSFRLLACWVLPCFLVEAAYKIWWYSSVAVQIPYIGHPSWWNSVACLL 162 (398)
T ss_pred HhHhcCceeeeeecccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHheEEeeccccCCccCCccHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999977665555 22333688
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcHHHHHhhccCHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHH
Q 013127 200 LILSWTYLSTISLSASILFHVVCNLQVMHFDDYAKLLAMESDVVVLIEEHMRLRYHLSKISHRFRIYLLLEFLVVTASQI 279 (449)
Q Consensus 200 ~l~SW~YrT~ifll~CVLFrLiC~LQiLR~~~~~klfe~~sdv~~il~EH~RIR~qL~~ISHRfR~Fil~~ll~VTaSQf 279 (449)
+++||+|||+|||++||||||+|||||||||||+|+||+++||++||+||+|||+||+|||||||+|||+||++||||||
T Consensus 163 ~l~SW~YrT~ifl~~CvLFrLiC~LQiLr~~~~~klfe~~sdv~~il~EH~RiR~qL~~ISHRfR~Fil~~l~~VTaSQf 242 (398)
T PF12056_consen 163 ELASWLYRTTIFLLVCVLFRLICNLQILRFEGYAKLFERDSDVGVILEEHLRIRRQLSKISHRFRIFILLSLLLVTASQF 242 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhheehHhHHHHHccCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCcceeeeecCceeehhHHHHHHHHHHHhhhhhhhhhhhhHHHHHhhhhhhhhccCCCCCcccccCCCCCcc
Q 013127 280 VSLFQTTGYGGKITFINGGDFAASSVVQVVGIILCLHAATKISHRAQNIASIASRWHALATCSSGDSSQLRVSNSFGNLE 359 (449)
Q Consensus 280 ~sLl~~t~~~~~inf~~~GdLavcS~vqv~Gl~icL~~AaKITHrAQ~I~siAskWHa~aT~~s~d~~~~~~~~~~~~~~ 359 (449)
++||+||++++++||+|+|||||||+|||+|++||||||||||||||+|||+||||||++||+|+|+.+.++++..+..+
T Consensus 243 ~sLl~~t~~~~~inf~~~GdlavcS~vqv~Gl~iCL~~AaKITHrAQ~I~siAskWHa~aTc~s~d~~~~~~p~~~~~~~ 322 (398)
T PF12056_consen 243 VSLLQTTRSKGDINFFNAGDLAVCSVVQVSGLFICLHGAAKITHRAQAITSIASKWHACATCSSFDSDQGETPTSDSLSA 322 (398)
T ss_pred HHHHHHhccccceeEeeccceeeehHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhheecccccccccCCCCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999866544433332222
Q ss_pred CCCCCCCcCCCCCCCcccccc-cccCCCcccchhh--hhhhHhHHHHHHHhhcCCCceEEEEEeehhhhHHHHHHH
Q 013127 360 ASSPLNSVHMNYSESDLVSLD-YVAMPTNTQLASY--MCSYHRRQAYVMYLQANPGGITIFGWTVDRALINTIFFI 432 (449)
Q Consensus 360 ~~~~~~~~~~d~~~~d~ds~d-~~~~~~~~~~~~~--~~SfqkRQAlVtYLq~N~~GITvfGf~lDR~~L~TIF~~ 432 (449)
+.++......++++||+|+.| +.+.+++++.|+| |+||||||||||||||||||||||||+|||||||||||+
T Consensus 323 ~~~~~~~~~~~~~~sd~es~d~~~~~~~~~~~~~~~~~~SfqKRQALVtYLq~N~aGITvfGf~lDR~~LhTIF~i 398 (398)
T PF12056_consen 323 AANPFPSAGINSSSSDDESGDEEDDLDNTKQLPSYADMISFQKRQALVTYLQNNRAGITVFGFVLDRGLLHTIFMI 398 (398)
T ss_pred ccccccCCCCCCCccchhhcccCCCCCccccccccchhHHHHHHHHHHHHHhcCCCCeEEEEEEeehHHHHHHhhC
Confidence 222223333344444444443 5556699999999 999999999999999999999999999999999999985
|
This protein is found in eukaryotes. Proteins in this family are typically between 427 to 453 amino acids in length. |
| >PF08395 7tm_7: 7tm Chemosensory receptor; InterPro: IPR013604 This family includes a number of gustatory and odorant receptors mainly from insect species such as Anopheles gambiae (African malaria mosquito) and Drosophila melanogaster (Fruit fly) | Back alignment and domain information |
|---|
| >PF02949 7tm_6: 7tm Odorant receptor; InterPro: IPR004117 All known members of this group are seven-transmembrane proteins that are candidate odorant receptors in Drosophila | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 449 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-09 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 57.9 bits (139), Expect = 5e-09
Identities = 49/320 (15%), Positives = 90/320 (28%), Gaps = 87/320 (27%)
Query: 19 LLNNSNQNHTQLPQQQQQENQIPETDLDRTLQKLEYFLTFLGFNHS-SVLSFVLS---WT 74
LL + N T + + +L L + + VL V + W
Sbjct: 205 LLYQIDPNWTSRSDHSSN----IKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWN 260
Query: 75 AF-------------VVTGVLVPVVILELS---NCPGCEKGQIKD-FELCI------VAS 111
AF VT L +S + ++K + +
Sbjct: 261 AFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPR 320
Query: 112 QACLA---AISLI--------CMSHNLRKYGIRKF-----LFVDRHSGHMERFHYQYIQQ 155
+ +S+I N + K ++ R + +
Sbjct: 321 EVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSV 380
Query: 156 IKDSLR-----LLILWSLPCFILKTAREIIRILYVHHESWWQSAAILFALILSWTYLSTI 210
S L ++W +++ ++ H+ +L+ STI
Sbjct: 381 FPPSAHIPTILLSLIWFD-----VIKSDVMVVVNKLHKY---------SLVEKQPKESTI 426
Query: 211 SLSASILFHVVC---NLQVMH---FDDYAKLLAMESDVVVLIEE------HMRLRYHLSK 258
S+ SI + N +H D Y +SD ++ H + +HL
Sbjct: 427 SIP-SIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSH--IGHHLKN 483
Query: 259 ISH-----RFR-IYLLLEFL 272
I H FR ++L FL
Sbjct: 484 IEHPERMTLFRMVFLDFRFL 503
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00