Citrus Sinensis ID: 013132

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------45
Protein Sequence
MASTANPVQYSIKTPRISSLYLSSTKVCCAKVLNSTRSLTSNARRLLDFSPLPEKKESSRGVSFCGEPLKFSGGSQQIRRRGTVDFPVVSAAAADADGHAHEIEIEVSDGYAEPSKSFGERFPALVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTASFHDLCADIHPEFCSNIRFSWQAQFLRPSSFVAYQYYCSHKETRILDRKPSII
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHcHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccEEccEEEEEccccEEEEEcccEEcccccccccccccccccccccccccccccccccccccccccccccccccccHccccccccccccccHccccccccccccccccHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHEEHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcHHHHHHcccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHccccccccccccEEEEHHHHHcccccEEEEEEEEcccccEEcccccccc
Coil and Loop (DISEMBL)
mastanpvqysiktprisslyLSSTKVCCAKVLNSTRSLTSNARrlldfsplpekkessrgvsfcgeplkfsggsqqirrrgtvdfpvvsaaaadadghaHEIEIEvsdgyaepsksfgerfpALVTGFFFFMWYFLNVIFNILnkkvynyfpyPYFVSVIHLLVGVVYCLVSWtvglpqrapinkELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYRSIYSKkamtgmdstNVYAYTSIIALLFcippavliegpqlMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFgnyftasfhdlcadihpefcSNIRFSwqaqflrpssFVAYQYYCShketrildrkpsii
Flexible Loop (DISEMBL)
mastanpvqysiktprisslYLSSTKVCCAKVLNstrsltsnarrlldfsplpekkessrgvsfcgeplkfsggsqqirrrGTVDFPVVSAAAADADGHAHEIEIEVSDGYAEPSKSFGERFPALVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTASFHDLCADIHPEFCSNIRFSWQAQFLRPSSFVAYQYYCShketrildrkpsii
Low Complexity Region (SEG)
MASTANPVQYSIKTPRISSLYLSSTKVCCAKVLNSTRSLTSNARRLLDFSPLPEKKESSRGVSFCGEPLKFSGGSQQIRRRGTVDFPVVSaaaadadghahEIEIEVSDGYAEPSKSFGERFPALVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRvfvigfsivvfgNYFTASFHDLCADIHPEFCSNIRFSWQAQFLRPSSFVAYQYYCSHKETRILDRKPSII
Disordered region (IsUnstruct)
***********IKTPRISSLYLSSTKVCCAKVLNST*********************************************GTVDFPVVSAAAADADGHAHEIEIEVSDGY*****SFGERFPALVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTASFHDLCADIHPEFCSNIRFSWQAQFLRPSSFVAYQYYCSHKETRI********
Disordered Region (DISOPRED)
****************************************************************************************************************************LVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTASFHDLCADIHPEFCSNIRFSWQ**********A********************
Disordered Region (DISEMBL)
********QYSIKTPRISSLYLSSTKVCCAKVLNSTRSLTSNARRLLDFSPLP********VSFCGEPLKFSGGSQQIRRRGTVDFPVVSAAAADADGHAHEIEIEVSDGYAEPSKSFGERFPALVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTASFHDLCADIHPEFCSNIRFSWQAQFLRPSSFVAYQYYCSHKETRILDRKPSII
Disordered Region (DISPRO)
*ASTANPVQYSIKTPRISSLYLSSTKVCCAKVLN************************************************************************************GERFPALVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTASFHDLCADIHPEFCSNIRFSWQAQFLRPSSFVAYQYYCSHKETRILDR*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASTANPVQYSIKTPRISSLYLSSTKVCCAKVLNSTRSLTSNARRLLDFSPLPEKKESSRGVSFCGEPLKFSGGSQQIRRRGTVDFPVVSAAAADADGHAHEIEIEVSDGYAEPSKSFGERFPALVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTASFHDLCADIHPEFCSNIRFSWQAQFLRPSSFVAYQYYCSHKETRILDRKPSII
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	449	2.2.26 [Sep-21-2011]
Q9FTT3	417	Triose phosphate/phosphat	yes	no	0.639	0.688	0.840	1e-141
P49132	407	Triose phosphate/phosphat	N/A	no	0.645	0.712	0.795	1e-139
P11869	404	Triose phosphate/phosphat	N/A	no	0.634	0.705	0.810	1e-137
Q9ZSR7	410	Triose phosphate/phosphat	yes	no	0.670	0.734	0.759	1e-136
P21727	402	Triose phosphate/phosphat	N/A	no	0.614	0.686	0.836	1e-136
P49131	408	Triose phosphate/phosphat	N/A	no	0.632	0.696	0.814	1e-135
P29463	414	Triose phosphate/phosphat	N/A	no	0.596	0.647	0.858	1e-135
P49133	409	Triose phosphate/phosphat	N/A	no	0.619	0.679	0.823	1e-135
P52177	407	Triose phosphate/phosphat	N/A	no	0.639	0.705	0.783	1e-134
Q9M5A9	388	Glucose-6-phosphate/phosp	no	no	0.692	0.801	0.408	2e-60

>sp|Q9FTT3|TPT_ORYSJ Triose phosphate/phosphate translocator TPT, chloroplastic OS=Oryza sativa subsp. japonica GN=TPT PE=2 SV=1

 Score =  500 bits (1288), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 242/288 (84%), Positives = 266/288 (92%), Gaps = 1/288 (0%)

Query: 108 SDGYAEPSKSFGERFPALVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGV 167
           + G A+P+  F E++PAL+TGFFFFMWYFLNVIFNILNKK+YNYFPYPYFVSVIHLLVGV
Sbjct: 98  TSGEAKPA-GFLEKYPALITGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLLVGV 156

Query: 168 VYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPF 227
           VYCLVSWTVGLP+RAPIN  LL +L PVA CHALGHV SNVSFATVAVSF HTIKALEPF
Sbjct: 157 VYCLVSWTVGLPKRAPINSTLLKLLFPVALCHALGHVTSNVSFATVAVSFAHTIKALEPF 216

Query: 228 FNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYRSIY 287
           FNAAA+QFVLG Q+PL LWLSLAPVV+GVSMASLTELSFNWTGFI+AMISNI+FTYRSIY
Sbjct: 217 FNAAATQFVLGQQVPLPLWLSLAPVVLGVSMASLTELSFNWTGFINAMISNISFTYRSIY 276

Query: 288 SKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFW 347
           SKKAMT MDSTNVYAY SIIAL+ CIPPAV+IEGPQL+Q+GF  AIAKVGL KF+SDLF+
Sbjct: 277 SKKAMTDMDSTNVYAYISIIALIVCIPPAVIIEGPQLLQHGFNDAIAKVGLTKFVSDLFF 336

Query: 348 IGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFT 395
           +G+FYHLYNQ+ATNTLERVAPLTHAVGNVLKRVFVIGFSI+VFGN  T
Sbjct: 337 VGLFYHLYNQVATNTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNRIT 384

Triose phosphate/phosphate translocator that may function in the export of photoassimilates from chloroplasts during the day.
Oryza sativa subsp. japonica (taxid: 39947)

>sp|P49132|TPT_FLATR Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria trinervia GN=TPT PE=2 SV=1

 Score =  494 bits (1272), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 241/303 (79%), Positives = 263/303 (86%), Gaps = 13/303 (4%)

Query: 90  SAAAADADGHAHEIEIEVSDGYAEPSKSFGERFPALVTGFFFFMWYFLNVIFNILNKKVY 149
           SA A+D+ G A  +              F  ++P LVTGFFFFMWYFLNVIFNILNKK+Y
Sbjct: 81  SATASDSAGDAAPV-------------GFLAKYPFLVTGFFFFMWYFLNVIFNILNKKIY 127

Query: 150 NYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHVMSNVS 209
           NYFPYPYFVSVIHL VGVVYCL SWTVGLP+RAP++  +L +L PV FCHALGHV SNVS
Sbjct: 128 NYFPYPYFVSVIHLAVGVVYCLGSWTVGLPKRAPVDSNILKLLIPVGFCHALGHVTSNVS 187

Query: 210 FATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELSFNWT 269
           FA VAVSFTHTIKALEPFFNAAASQFVLG  IP+SLWLSLAPVVIGVSMASLTELSFNW 
Sbjct: 188 FAAVAVSFTHTIKALEPFFNAAASQFVLGQSIPISLWLSLAPVVIGVSMASLTELSFNWL 247

Query: 270 GFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGF 329
           GFISAMISNI+FTYRSIYSKKAMT MDSTN+YAY SIIALLFCIPPAVL EGPQL+++GF
Sbjct: 248 GFISAMISNISFTYRSIYSKKAMTDMDSTNLYAYISIIALLFCIPPAVLFEGPQLLKHGF 307

Query: 330 KAAIAKVGLFKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVV 389
             AIAKVG+ KF+SDLFW+GMFYHLYNQ+ATNTLERVAPLTHAVGNVLKRVFVIGFSI+V
Sbjct: 308 NDAIAKVGMIKFISDLFWVGMFYHLYNQIATNTLERVAPLTHAVGNVLKRVFVIGFSIIV 367

Query: 390 FGN 392
           FGN
Sbjct: 368 FGN 370

Mediates the export of fixed carbons from the chloroplasts into the cytosol in the form of triose phosphates. In addition, it can also bind and transport phosphoenolpyruvate, thereby increasing the photosynthetic efficiency of C4-plants.

Flaveria trinervia (taxid: 4227)

>sp|P11869|TPT_SPIOL Triose phosphate/phosphate translocator, chloroplastic OS=Spinacia oleracea PE=1 SV=1

 Score =  489 bits (1260), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 231/285 (81%), Positives = 256/285 (89%)

Query: 108 SDGYAEPSKSFGERFPALVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGV 167
           S    E    F E++PALVTG FFFMWYFLNVIFNILNKK+YNYFPYPYFVSVIHL VGV
Sbjct: 83  SGSSGEAKTGFLEKYPALVTGSFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGV 142

Query: 168 VYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPF 227
           VYCL SW+VGLP+RAP++ +LL +L PVA CHA+GHV SNVSFA VAVSFTHTIKALEPF
Sbjct: 143 VYCLASWSVGLPKRAPMDSKLLKLLIPVAVCHAIGHVTSNVSFAAVAVSFTHTIKALEPF 202

Query: 228 FNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYRSIY 287
           FNAAASQFVLG  IP++LWLSLAPVVIGVSMASLTELSFNW GFISAMISN++FTYRS+Y
Sbjct: 203 FNAAASQFVLGQSIPITLWLSLAPVVIGVSMASLTELSFNWLGFISAMISNVSFTYRSLY 262

Query: 288 SKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFW 347
           SKKAMT MDSTN+YAY SIIAL  C+PPA+++EGPQLM++GF  AIAKVGL KF+SDLFW
Sbjct: 263 SKKAMTDMDSTNIYAYISIIALFVCLPPAIIVEGPQLMKHGFNDAIAKVGLTKFISDLFW 322

Query: 348 IGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGN 392
           +GMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSI+ FGN
Sbjct: 323 VGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIIAFGN 367

Mediates the export of fixed carbons from the chloroplasts into the cytosol in the form of triose phosphates.

Spinacia oleracea (taxid: 3562)

>sp|Q9ZSR7|TPT_ARATH Triose phosphate/phosphate translocator TPT, chloroplastic OS=Arabidopsis thaliana GN=TPT PE=2 SV=1

 Score =  486 bits (1251), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 234/308 (75%), Positives = 264/308 (85%), Gaps = 7/308 (2%)

Query: 92  AAADADGHAHEIEIEVSDGYAEPSKSFGE-------RFPALVTGFFFFMWYFLNVIFNIL 144
           ++A   G   EI   V    AE   + G+       ++P LVTGFFFFMWYFLNVIFNIL
Sbjct: 66  SSAINGGEKREILKPVKAAAAEGGDTAGDAKVGFLAKYPWLVTGFFFFMWYFLNVIFNIL 125

Query: 145 NKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHV 204
           NKK+YNYFPYPYFVSVIHL VGVVYCL+SW+VGLP+RAPI+  LL +L PVA CHALGHV
Sbjct: 126 NKKIYNYFPYPYFVSVIHLFVGVVYCLISWSVGLPKRAPIDSNLLKVLIPVAVCHALGHV 185

Query: 205 MSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTEL 264
            SNVSFA VAVSFTHTIKALEPFFNAAASQF++G  IP++LWLSLAPVV+GV+MASLTEL
Sbjct: 186 TSNVSFAAVAVSFTHTIKALEPFFNAAASQFIMGQSIPITLWLSLAPVVLGVAMASLTEL 245

Query: 265 SFNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQL 324
           SFNW GFISAMISNI+FTYRSI+SKKAMT MDSTNVYAY SIIAL  CIPPA+++EGP+L
Sbjct: 246 SFNWLGFISAMISNISFTYRSIFSKKAMTDMDSTNVYAYISIIALFVCIPPAIIVEGPKL 305

Query: 325 MQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIG 384
           + +GF  AIAKVG+ KF+SDLFW+GMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIG
Sbjct: 306 LNHGFADAIAKVGMTKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIG 365

Query: 385 FSIVVFGN 392
           FSIV+FGN
Sbjct: 366 FSIVIFGN 373

Triose phosphate/phosphate translocator that transports inorganic phosphate, 3-phosphoglycerate (3-PGA) and triose phosphate. Functions in the export of photoassimilates from chloroplasts during the day. In the light, triose phosphates are exported from the chloroplast stroma in counter exchange with inorganic phosphate (Pi), generated during sucrose biosynthesis in the cytosol. Involved in photosynthetic acclimation, a light response resulting in increased tolerance to high-intensity light.

Arabidopsis thaliana (taxid: 3702)

>sp|P21727|TPT_PEA Triose phosphate/phosphate translocator, chloroplastic OS=Pisum sativum PE=1 SV=1

 Score =  484 bits (1247), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 231/276 (83%), Positives = 252/276 (91%)

Query: 117 SFGERFPALVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTV 176
            F  R+PAL TGFFFF WYFLNVIFNILNKK+YNYFPYPYFVSVIHL VGVVYCLVSWTV
Sbjct: 90  GFFSRYPALTTGFFFFTWYFLNVIFNILNKKIYNYFPYPYFVSVIHLAVGVVYCLVSWTV 149

Query: 177 GLPQRAPINKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFV 236
           GLP+RAPI+  LL +L PVA CHALGHV SNVSFA VAVSFTHT+KALEPFFNAAASQF+
Sbjct: 150 GLPKRAPIDGNLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTVKALEPFFNAAASQFI 209

Query: 237 LGHQIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYRSIYSKKAMTGMD 296
           LG  IP++LWLSLAPVVIGVSMASLTELSFNW GFISAMISNI+FTYRSIYSKKAMT MD
Sbjct: 210 LGQSIPITLWLSLAPVVIGVSMASLTELSFNWLGFISAMISNISFTYRSIYSKKAMTDMD 269

Query: 297 STNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYN 356
           STN+YAY SIIAL+ CIPPA++IEGP L++ GF  AIAKVGL KF+SDLFW+GMFYHLYN
Sbjct: 270 STNIYAYISIIALIVCIPPALIIEGPTLLKTGFNDAIAKVGLVKFVSDLFWVGMFYHLYN 329

Query: 357 QLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGN 392
           Q+ATNTLERVAPLTHAVGNVLKRVFVIGFSI++FGN
Sbjct: 330 QVATNTLERVAPLTHAVGNVLKRVFVIGFSIIIFGN 365

Mediates the export of fixed carbons from the chloroplasts into the cytosol in the form of triose phosphates.

Pisum sativum (taxid: 3888)

>sp|P49131|TPT_FLAPR Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria pringlei GN=TPT PE=2 SV=1

 Score =  483 bits (1243), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 232/285 (81%), Positives = 256/285 (89%), Gaps = 1/285 (0%)

Query: 108 SDGYAEPSKSFGERFPALVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGV 167
           S G A P   F  ++P LVTGFFFFMWYFLNVIFNILNKK+YNYFPYPYFVS IHL VGV
Sbjct: 88  SAGDAAPVGFFA-KYPFLVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSAIHLAVGV 146

Query: 168 VYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPF 227
           VYCL  W VGLP+RAP++  LL +L PVAFCHALGHV SNVSFA VAVSFTHTIK+LEPF
Sbjct: 147 VYCLGGWAVGLPKRAPMDSNLLKLLIPVAFCHALGHVTSNVSFAAVAVSFTHTIKSLEPF 206

Query: 228 FNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYRSIY 287
           FNAAASQF+LG  IP++LWLSLAPVVIGVSMASLTELSFNW GFISAMISNI+FTYRSIY
Sbjct: 207 FNAAASQFILGQSIPITLWLSLAPVVIGVSMASLTELSFNWLGFISAMISNISFTYRSIY 266

Query: 288 SKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFW 347
           SKKAMT MDSTN+YAY SII+LLFCIPPA+++EGPQL+++GF  AIAKVG+ KF+SDLFW
Sbjct: 267 SKKAMTDMDSTNLYAYISIISLLFCIPPAIILEGPQLLKHGFSDAIAKVGMTKFISDLFW 326

Query: 348 IGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGN 392
           +GMFYHLYNQLA NTLERVAPLTHAVGNVLKRVFVIGFSI+VFGN
Sbjct: 327 VGMFYHLYNQLAINTLERVAPLTHAVGNVLKRVFVIGFSIIVFGN 371

Mediates the export of fixed carbons from the chloroplasts into the cytosol in the form of triose phosphates.

Flaveria pringlei (taxid: 4226)

>sp|P29463|TPT_SOLTU Triose phosphate/phosphate translocator, chloroplastic OS=Solanum tuberosum GN=TPT PE=2 SV=1

 Score =  483 bits (1243), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 230/268 (85%), Positives = 249/268 (92%)

Query: 125 LVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPI 184
           L TGFFFFMWYFLNVIFNILNKK+YNYFPYPYFVSVIHL VGVVYCLVSW VGLP+RAPI
Sbjct: 110 LTTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLAVGVVYCLVSWGVGLPKRAPI 169

Query: 185 NKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLS 244
           +   L +LTPVAFCHALGHV SNVSFA V VSFTHT+KALEPFFNAAASQF+LG QIPL+
Sbjct: 170 DSTQLKLLTPVAFCHALGHVTSNVSFAAVRVSFTHTVKALEPFFNAAASQFILGQQIPLA 229

Query: 245 LWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYT 304
           LWLSLAPVV+GVSMASLTELSFNW GF SAMISNI+FTYRSIYSKKAMT MDSTNVYAY 
Sbjct: 230 LWLSLAPVVLGVSMASLTELSFNWLGFTSAMISNISFTYRSIYSKKAMTDMDSTNVYAYI 289

Query: 305 SIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQLATNTLE 364
           SIIAL+FC+PPA+ IEGPQL+Q+GF  AIAKVGL KF++DLFW+GMFYHLYNQ+ATNTLE
Sbjct: 290 SIIALIFCLPPAIFIEGPQLLQHGFNDAIAKVGLTKFVTDLFWVGMFYHLYNQVATNTLE 349

Query: 365 RVAPLTHAVGNVLKRVFVIGFSIVVFGN 392
           RVAPLTHAVGNVLKRVFVIGFSIV+FGN
Sbjct: 350 RVAPLTHAVGNVLKRVFVIGFSIVIFGN 377

Mediates the export of fixed carbons from the chloroplasts into the cytosol in the form of triose phosphates.

Solanum tuberosum (taxid: 4113)

>sp|P49133|TPT_MAIZE Triose phosphate/phosphate translocator, chloroplastic OS=Zea mays GN=TPT PE=1 SV=1

 Score =  482 bits (1240), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 229/278 (82%), Positives = 256/278 (92%)

Query: 115 SKSFGERFPALVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSW 174
           S  F E++PALVTGFFFFMWYFLNVIFNILNKK+YNYFPYPYFVS+IHL+VGVVYCL+SW
Sbjct: 96  SVGFLEKYPALVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSLIHLVVGVVYCLISW 155

Query: 175 TVGLPQRAPINKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQ 234
           +VGLP+RAPIN  LL +L PVA CH +GH+ SNVSFA VAVSF HTIKALEPFF+AAA+Q
Sbjct: 156 SVGLPKRAPINGTLLKLLFPVALCHGIGHITSNVSFAAVAVSFAHTIKALEPFFSAAATQ 215

Query: 235 FVLGHQIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYRSIYSKKAMTG 294
           F+LG Q+P SLWLSLAPVVIGVSMASLTELSFNWTGFI+AMISNI+FTYRSIYSKKAMT 
Sbjct: 216 FILGQQVPFSLWLSLAPVVIGVSMASLTELSFNWTGFINAMISNISFTYRSIYSKKAMTD 275

Query: 295 MDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHL 354
           MDSTNVYAY SIIAL+ CIPPA++ EGP+LMQ+GF  AIAKVGL KF+SDLF +G+FYHL
Sbjct: 276 MDSTNVYAYISIIALIVCIPPALIFEGPKLMQHGFSDAIAKVGLTKFVSDLFLVGLFYHL 335

Query: 355 YNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGN 392
           YNQ+ATNTLERVAPLTHAVGNVLKRVFVIGFSI+VFGN
Sbjct: 336 YNQIATNTLERVAPLTHAVGNVLKRVFVIGFSIIVFGN 373

Mediates the export of fixed carbons from the chloroplasts into the cytosol in the form of triose phosphates. In addition, it can also bind and transport phosphoenolpyruvate, thereby increasing the photosynthetic efficiency of C4-plants.

Zea mays (taxid: 4577)

>sp|P52177|TPT1_BRAOB Triose phosphate/phosphate translocator, chloroplastic OS=Brassica oleracea var. botrytis GN=TPT PE=2 SV=1

 Score =  479 bits (1233), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 225/287 (78%), Positives = 254/287 (88%)

Query: 106 EVSDGYAEPSKSFGERFPALVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLV 165
           E  D   E    F  ++P LVTG    MWYFLNVIFNILNKK+YNYFPYPYFVSVIHL V
Sbjct: 84  EGGDSAGETKVGFLGKYPWLVTGILLLMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFV 143

Query: 166 GVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALE 225
           GVVYCLVSW+VGLP+RAP+N ++L +L PVA CHA+GHV SNVSFA VAVSFTHTIKALE
Sbjct: 144 GVVYCLVSWSVGLPKRAPVNSDILKVLIPVAVCHAIGHVTSNVSFAAVAVSFTHTIKALE 203

Query: 226 PFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYRS 285
           PFFNA+ASQF+LG  IP++LWLSLAPVV+GV+MASLTELSFNW GFISAMISNI+FTYRS
Sbjct: 204 PFFNASASQFLLGQPIPITLWLSLAPVVLGVAMASLTELSFNWLGFISAMISNISFTYRS 263

Query: 286 IYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDL 345
           I+SKKAMT MDSTNVYAY SIIAL  C+PPA+++EGPQL+++GF  AIAKVG+ KF+SDL
Sbjct: 264 IFSKKAMTDMDSTNVYAYISIIALFVCLPPAIIVEGPQLLKHGFNDAIAKVGMTKFISDL 323

Query: 346 FWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGN 392
           FW+GMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIV+FGN
Sbjct: 324 FWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVIFGN 370

Mediates the export of fixed carbons from the chloroplasts into the cytosol in the form of triose phosphates.

Brassica oleracea var. botrytis (taxid: 3715)

>sp|Q9M5A9|GPT1_ARATH Glucose-6-phosphate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=GPT1 PE=2 SV=1

 Score =  233 bits (594), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 136/333 (40%), Positives = 199/333 (59%), Gaps = 22/333 (6%)

Query: 53  PEKKESSRGVSFCGEPLKFSGGSQQIRRRGTVDFPVVSAAAADAD-GHAHEIEIEVSDGY 111
           P  +   R V    +PL  S     +R +     PVV   A +AD    H I     D  
Sbjct: 34  PSTELPKRTVLAVSKPLHLS---SSLRAKS----PVVRCEAYEADRSEPHPIG---DDAA 83

Query: 112 AEPSKSFGERFPALVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCL 171
           A  +KS  E    L  G +F  W+ LNV+FNI NKKV N +PYP+  S + L  G +  L
Sbjct: 84  AAETKS--EAAKKLKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLAAGSLMML 141

Query: 172 VSWTVGLPQRAPINKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAA 231
           +SW VG+ +    + +    L PVA  H +GHV + VS + VAVSFTH IK+ EP F+  
Sbjct: 142 ISWAVGIVETPKTDFDFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVL 201

Query: 232 ASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYRSIYSKKA 291
            S+F+LG   P S++LSL P++ G ++++LTEL+FN  GF+ AMISN+AF +R+I+SKK 
Sbjct: 202 VSRFILGETFPTSVYLSLIPIIGGCALSALTELNFNMIGFMGAMISNLAFVFRNIFSKKG 261

Query: 292 MTG--MDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWI- 348
           M G  +   N YA  S+++LL   P A+ +EGPQ+   G++ A+A VG  +F   ++W+ 
Sbjct: 262 MKGKSVSGMNYYACLSMLSLLILTPFAIAVEGPQMWVDGWQTALATVGP-QF---VWWVV 317

Query: 349 --GMFYHLYNQLATNTLERVAPLTHAVGNVLKR 379
              +FYHLYNQ++  +L++++PLT +VGN +KR
Sbjct: 318 AQSVFYHLYNQVSYMSLDQISPLTFSVGNTMKR 350

Glucose 6-phosphate (Glc6P) transporter. Transports also inorganic phosphate, 3-phosphoglycerate, triose phosphates and, to a leser extent, phosphoenolpyruvate. Responsible for the transport of Glc6P into plastids of heterotrophic tissues where it can be used as a carbon source for starch biosynthesis, as substrate for fatty acid biosynthesis or as substrate for NADPH generation via the oxidative pentose phosphate pathway (OPPP). Required for pollen maturation and embryo sac development.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	449
255542054	407	Triose phosphate/phosphate translocator,	0.799	0.882	0.787	1e-165
225423489	414	PREDICTED: triose phosphate/phosphate tr	0.815	0.884	0.760	1e-157
357487535	436	Triose phosphate/phosphate translocator	0.815	0.839	0.684	1e-153
116787954	443	unknown [Picea sitchensis] gi|224286316|	0.723	0.733	0.787	1e-150
449435308	418	PREDICTED: triose phosphate/phosphate tr	0.844	0.906	0.730	1e-149
449528903	412	PREDICTED: triose phosphate/phosphate tr	0.844	0.919	0.730	1e-149
224098964	305	predicted protein [Populus trichocarpa]	0.608	0.895	0.930	1e-145
222618073	382	hypothetical protein OsJ_01049 [Oryza sa	0.701	0.824	0.781	1e-140
449433798	411	PREDICTED: triose phosphate/phosphate tr	0.683	0.746	0.785	1e-139
224125582	408	predicted protein [Populus trichocarpa]	0.694	0.764	0.764	1e-139

>gi|255542054|ref|XP_002512091.1| Triose phosphate/phosphate translocator, chloroplast precursor, putative [Ricinus communis] gi|223549271|gb|EEF50760.1| Triose phosphate/phosphate translocator, chloroplast precursor, putative [Ricinus communis]

 Score =  586 bits (1511), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 300/381 (78%), Positives = 323/381 (84%), Gaps = 22/381 (5%)

Query: 14  TPRISSLYLSSTKVCCAKVLNSTRSLTSNARRLLDFSPLPEKKESSRGVSFCGEPLKFSG 73
           +PR SSLYLS TK+  + V   TRS    AR L D   L         + F  EP   +G
Sbjct: 7   SPRFSSLYLSPTKISPSHVSLKTRSPQLAARLLPDIPKL--------QIQFSSEPSILAG 58

Query: 74  G-SQQIRRRGTVDFPVVSAAAADADGHAHEIEIEVSDGYAEPS-KSFGERFPALVTGFFF 131
             +Q I+RR  +DFP+V+AAAADA+GH             EP+ KSFGERFPALVTGFFF
Sbjct: 59  WITQPIKRRRPIDFPLVNAAAADAEGHV------------EPAAKSFGERFPALVTGFFF 106

Query: 132 FMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVI 191
           FMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCL SW  GLP+RAPI+++LLV+
Sbjct: 107 FMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLTSWGFGLPKRAPIDRDLLVL 166

Query: 192 LTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAP 251
           LTPVA CHALGHVMSNVSFA VAVSFTHTIKALEPFF+AAASQFVLGHQIPLSLWLSLAP
Sbjct: 167 LTPVACCHALGHVMSNVSFAAVAVSFTHTIKALEPFFSAAASQFVLGHQIPLSLWLSLAP 226

Query: 252 VVIGVSMASLTELSFNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLF 311
           VVIGVSMASLTELSFNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAY SIIALLF
Sbjct: 227 VVIGVSMASLTELSFNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYISIIALLF 286

Query: 312 CIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQLATNTLERVAPLTH 371
           CIPPAVLIEGP+LMQYGF+ AI+KVGLFKF+SDLFWIGMFYHLYNQ+ATNTLERVAPLTH
Sbjct: 287 CIPPAVLIEGPKLMQYGFRDAISKVGLFKFVSDLFWIGMFYHLYNQVATNTLERVAPLTH 346

Query: 372 AVGNVLKRVFVIGFSIVVFGN 392
           AVGNVLKRVFVIGFSIVVFGN
Sbjct: 347 AVGNVLKRVFVIGFSIVVFGN 367

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225423489|ref|XP_002267940.1| PREDICTED: triose phosphate/phosphate translocator, chloroplastic [Vitis vinifera] gi|297738078|emb|CBI27279.3| unnamed protein product [Vitis vinifera]

 Score =  559 bits (1441), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 292/384 (76%), Positives = 316/384 (82%), Gaps = 18/384 (4%)

Query: 11  SIKTPRISSLYLSSTKVCCAKVLNSTRSLTSNARRLLDFSPLPEKKESSRGVSFCGEPLK 70
           S++  + SSL L++ ++     L  T SL S +     FS LPE + S+  V F G  LK
Sbjct: 7   SVRCSQFSSLGLNAKRISRNYGLPRTPSLVSAS----PFSALPEIRVSAAPVQFSGNALK 62

Query: 71  FSGGSQQIRRRGT--VDFPVVSAAAADADGHAHEIEIEVSDGYAEPSKSFGERFPALVTG 128
           F+G    +RR+G   V  PV                   +DG  +PSKSF E+FP LVTG
Sbjct: 63  FAGWDPLLRRQGGAGVKLPV------------PAAAAADADGVTKPSKSFAEKFPVLVTG 110

Query: 129 FFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKEL 188
           FFFFMWYFLNVIFNILNKKVYNYFPYPYFVS+IHLLVGV YCLVSW VGLP+RAP++KEL
Sbjct: 111 FFFFMWYFLNVIFNILNKKVYNYFPYPYFVSLIHLLVGVAYCLVSWAVGLPKRAPMDKEL 170

Query: 189 LVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLS 248
           L++LTPVA CHALGHVMSNVSFA VAVSFTHTIKALEPFFNAAASQFVLGHQIP SLWLS
Sbjct: 171 LLLLTPVALCHALGHVMSNVSFAAVAVSFTHTIKALEPFFNAAASQFVLGHQIPFSLWLS 230

Query: 249 LAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIA 308
           LAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIA
Sbjct: 231 LAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIA 290

Query: 309 LLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQLATNTLERVAP 368
           LLFCIPPAVLIEGPQLMQYGF+ AIAKVGL KFLSDLFWIGMFYHLYNQLATNTLERVAP
Sbjct: 291 LLFCIPPAVLIEGPQLMQYGFRDAIAKVGLTKFLSDLFWIGMFYHLYNQLATNTLERVAP 350

Query: 369 LTHAVGNVLKRVFVIGFSIVVFGN 392
           LTHAVGNVLKRVFVIGFSIV+FGN
Sbjct: 351 LTHAVGNVLKRVFVIGFSIVIFGN 374

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357487535|ref|XP_003614055.1| Triose phosphate/phosphate translocator [Medicago truncatula] gi|355515390|gb|AES97013.1| Triose phosphate/phosphate translocator [Medicago truncatula]

 Score =  547 bits (1410), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 289/422 (68%), Positives = 324/422 (76%), Gaps = 56/422 (13%)

Query: 1   MASTANPVQYSIKTPRISSLYLSSTKVCCAKVLNSTRSLTSNARRL---LDFSPLPEKKE 57
           M+   NPV  S++ P+ISS++L   +V  +      +S T     +   L FSPL +K  
Sbjct: 1   MSCVTNPVLISVQRPQISSVFLLPKRVSSSTSYGLLKSRTLQHESINSSLVFSPLVKK-- 58

Query: 58  SSRGVSFCGEPLKFSGGSQQIRRRGTVDFPVVSAAAADADGHAHEIEIEVSDGYAEPSKS 117
            + GV+               +RR    FPVV+A AADAD    + EIE+S+G  + SKS
Sbjct: 59  -AFGVN---------------QRR----FPVVTALAADAD----DSEIEISNGSVQSSKS 94

Query: 118 FGERFPALVTGFFFFMW---------------------------YFLNVIFNILNKKVYN 150
           FGE+FPALVTGFFFFM                            YFLNVIFNILNKKVYN
Sbjct: 95  FGEKFPALVTGFFFFMCSSAPGCPYARLLQTCNMFSEIVLLLCRYFLNVIFNILNKKVYN 154

Query: 151 YFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHVMSNVSF 210
           YFPYPYFVSV+HLLVGVVYCL SW +GLP+RAP+NKELL++LTPVAFCHALGHVMSNVSF
Sbjct: 155 YFPYPYFVSVVHLLVGVVYCLFSWGLGLPKRAPMNKELLLLLTPVAFCHALGHVMSNVSF 214

Query: 211 ATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELSFNWTG 270
           A VAVSFTHTIKALEPFFNA+ASQFVLG  IPLSLWLSL PVV+GVSMASLTELSFNWTG
Sbjct: 215 AAVAVSFTHTIKALEPFFNASASQFVLGQHIPLSLWLSLTPVVLGVSMASLTELSFNWTG 274

Query: 271 FISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFK 330
           FISAMISNIAFTYRS+YSKKAMTGMDSTNVYAY S+IAL FCIPPA+LIEGPQLM++GF+
Sbjct: 275 FISAMISNIAFTYRSLYSKKAMTGMDSTNVYAYISVIALAFCIPPAILIEGPQLMEFGFR 334

Query: 331 AAIAKVGLFKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVF 390
            AI+KVGL KFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVF
Sbjct: 335 NAISKVGLTKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVF 394

Query: 391 GN 392
           GN
Sbjct: 395 GN 396

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116787954|gb|ABK24702.1| unknown [Picea sitchensis] gi|224286316|gb|ACN40866.1| unknown [Picea sitchensis]

 Score =  539 bits (1388), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 260/330 (78%), Positives = 292/330 (88%), Gaps = 5/330 (1%)

Query: 64  FCGE-PLKFSGGSQQIRRRGTVDFPVVSAAAADADGHAHEIEIEVSDGYAEPSKSFGERF 122
           F G+ P+  +G +  +RRR      V SA  ADA+G     E+ +S G  +PS+SF +++
Sbjct: 76  FAGKSPIGLNGSTLPLRRRPIEPSTVCSAGTADAEGD----EVFISSGLDKPSQSFADKY 131

Query: 123 PALVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRA 182
           P L+TGFFFFMWY LNVIFNILNKK+YNYFPYPYFVSVIHL+VGV YCLVSW++GLP+RA
Sbjct: 132 PWLITGFFFFMWYLLNVIFNILNKKIYNYFPYPYFVSVIHLVVGVAYCLVSWSLGLPKRA 191

Query: 183 PINKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIP 242
           PI+KELL++LTPVA CHALGHVM+NVSFATVAVSFTHTIKALEPFFNA+ASQFVLG QIP
Sbjct: 192 PIDKELLLLLTPVAICHALGHVMTNVSFATVAVSFTHTIKALEPFFNASASQFVLGQQIP 251

Query: 243 LSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYA 302
            +LWLSLAPVV+GVSMASLTELSFNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYA
Sbjct: 252 FTLWLSLAPVVLGVSMASLTELSFNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYA 311

Query: 303 YTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQLATNT 362
           Y SIIAL FC+PPA++IEGP+LMQ GF  AIAKVGL KFLSDLFW+GMFYHLYNQLATNT
Sbjct: 312 YISIIALFFCLPPAIIIEGPKLMQSGFADAIAKVGLVKFLSDLFWVGMFYHLYNQLATNT 371

Query: 363 LERVAPLTHAVGNVLKRVFVIGFSIVVFGN 392
           LERVAPLTHAVGNVLKRVFVIGFSI+VFGN
Sbjct: 372 LERVAPLTHAVGNVLKRVFVIGFSIIVFGN 401

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449435308|ref|XP_004135437.1| PREDICTED: triose phosphate/phosphate translocator TPT, chloroplastic-like [Cucumis sativus]

 Score =  534 bits (1375), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 287/393 (73%), Positives = 314/393 (79%), Gaps = 14/393 (3%)

Query: 1   MASTANPVQYSIKTPRISSLYLSSTKVCCAK-VLNSTRSLTSNARRLLDFSPLPEKKESS 59
           MAS +N +   I + R+ S  L   +   A   +   RSL S        SPL E    S
Sbjct: 1   MASISNIIHSPIHSHRLPSFRLFPNRTFPANSFVLKRRSLASPLS-----SPLTENPTVS 55

Query: 60  RGVSFCGEPLKFSGGSQQIRRRGTVDFPVVSAAAADADGHAHEIEIEVSDGYAEPSKSFG 119
             V    + +      Q ++ R  V  PVV AAAADADG +  +           S+SFG
Sbjct: 56  PSVELSHKAIGLLSSRQPLKSRSVVRLPVVKAAAADADGASDGL--------TSSSESFG 107

Query: 120 ERFPALVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLP 179
            RFPAL+TGF+FFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSW VGLP
Sbjct: 108 ARFPALITGFYFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLP 167

Query: 180 QRAPINKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGH 239
           +RAPI+K+LL++LTPV+ CHALGHVMSNVSFA VAVSFTHTIKALEPFFNAAASQF+LGH
Sbjct: 168 KRAPIDKDLLLLLTPVSLCHALGHVMSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGH 227

Query: 240 QIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTN 299
           QIP SLWLSLAPVV+GVSMASLTELSFNW GF+SAMISNIAFTYRSIYSKKAMTGMDSTN
Sbjct: 228 QIPFSLWLSLAPVVLGVSMASLTELSFNWIGFVSAMISNIAFTYRSIYSKKAMTGMDSTN 287

Query: 300 VYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQLA 359
           VYAYTSIIALLFCIPPAV+IEGPQL+Q+GFK AIAKVGL KFLSDLFWIGMFYHLYNQLA
Sbjct: 288 VYAYTSIIALLFCIPPAVMIEGPQLLQHGFKDAIAKVGLHKFLSDLFWIGMFYHLYNQLA 347

Query: 360 TNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGN 392
            NTLERVAPLTHAVGNVLKRVFVIGFSIVVFGN
Sbjct: 348 ANTLERVAPLTHAVGNVLKRVFVIGFSIVVFGN 380

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449528903|ref|XP_004171441.1| PREDICTED: triose phosphate/phosphate translocator TPT, chloroplastic-like, partial [Cucumis sativus]

 Score =  534 bits (1375), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 287/393 (73%), Positives = 314/393 (79%), Gaps = 14/393 (3%)

Query: 1   MASTANPVQYSIKTPRISSLYLSSTKVCCAK-VLNSTRSLTSNARRLLDFSPLPEKKESS 59
           MAS +N +   I + R+ S  L   +   A   +   RSL S        SPL E    S
Sbjct: 1   MASISNIIHSPIHSHRLPSFRLFPNRTFPANSFVLKRRSLASPLS-----SPLTENPTVS 55

Query: 60  RGVSFCGEPLKFSGGSQQIRRRGTVDFPVVSAAAADADGHAHEIEIEVSDGYAEPSKSFG 119
             V    + +      Q ++ R  V  PVV AAAADADG +  +           S+SFG
Sbjct: 56  PSVELSHKAIGLLSSRQPLKSRSVVRLPVVKAAAADADGASDGL--------TSSSESFG 107

Query: 120 ERFPALVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLP 179
            RFPAL+TGF+FFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSW VGLP
Sbjct: 108 ARFPALITGFYFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLP 167

Query: 180 QRAPINKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGH 239
           +RAPI+K+LL++LTPV+ CHALGHVMSNVSFA VAVSFTHTIKALEPFFNAAASQF+LGH
Sbjct: 168 KRAPIDKDLLLLLTPVSLCHALGHVMSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGH 227

Query: 240 QIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTN 299
           QIP SLWLSLAPVV+GVSMASLTELSFNW GF+SAMISNIAFTYRSIYSKKAMTGMDSTN
Sbjct: 228 QIPFSLWLSLAPVVLGVSMASLTELSFNWIGFVSAMISNIAFTYRSIYSKKAMTGMDSTN 287

Query: 300 VYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQLA 359
           VYAYTSIIALLFCIPPAV+IEGPQL+Q+GFK AIAKVGL KFLSDLFWIGMFYHLYNQLA
Sbjct: 288 VYAYTSIIALLFCIPPAVMIEGPQLLQHGFKDAIAKVGLHKFLSDLFWIGMFYHLYNQLA 347

Query: 360 TNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGN 392
            NTLERVAPLTHAVGNVLKRVFVIGFSIVVFGN
Sbjct: 348 ANTLERVAPLTHAVGNVLKRVFVIGFSIVVFGN 380

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224098964|ref|XP_002311336.1| predicted protein [Populus trichocarpa] gi|222851156|gb|EEE88703.1| predicted protein [Populus trichocarpa]

 Score =  521 bits (1341), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 256/275 (93%), Positives = 265/275 (96%), Gaps = 2/275 (0%)

Query: 118 FGERFPALVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVG 177
           FGERFPALVTGFFFF WYFLNVIFNILNKKVYNYFPYPYFVSV+HLLVGVVYCLVSW VG
Sbjct: 1   FGERFPALVTGFFFFTWYFLNVIFNILNKKVYNYFPYPYFVSVVHLLVGVVYCLVSWGVG 60

Query: 178 LPQRAPINKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVL 237
           LP+RAPI+KELL +LTPVAFCHALGHVMSNVSFA VAVSFTHTIKALEPFF+AAASQFVL
Sbjct: 61  LPKRAPIDKELLALLTPVAFCHALGHVMSNVSFAAVAVSFTHTIKALEPFFSAAASQFVL 120

Query: 238 GHQIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYRSIYSKKAMTGMDS 297
           GHQIPLSLWLSLAPVVIGVS+ASLTELSFNWTGFISAMISNIAFTYRSIYSKKAMTGMDS
Sbjct: 121 GHQIPLSLWLSLAPVVIGVSVASLTELSFNWTGFISAMISNIAFTYRSIYSKKAMTGMDS 180

Query: 298 TNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQ 357
           TNVYAY SIIALL CIPPA  IEGPQLMQ+GF+ AIAKVGL KFLSDLFWIGMFYHLYNQ
Sbjct: 181 TNVYAYISIIALLVCIPPA--IEGPQLMQHGFRDAIAKVGLVKFLSDLFWIGMFYHLYNQ 238

Query: 358 LATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGN 392
           +ATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGN
Sbjct: 239 VATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGN 273

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|222618073|gb|EEE54205.1| hypothetical protein OsJ_01049 [Oryza sativa Japonica Group]

 Score =  505 bits (1300), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 247/316 (78%), Positives = 274/316 (86%), Gaps = 1/316 (0%)

Query: 80  RRGTVDFPVVSAAAADADGHAHEIEIEVSDGYAEPSKSFGERFPALVTGFFFFMWYFLNV 139
           RRG    P   +++      A       + G A+P+  F E++PAL+TGFFFFMWYFLNV
Sbjct: 35  RRGRRQPPTSPSSSQAGRRQALRPPAAATSGEAKPA-GFLEKYPALITGFFFFMWYFLNV 93

Query: 140 IFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCH 199
           IFNILNKK+YNYFPYPYFVSVIHLLVGVVYCLVSWTVGLP+RAPIN  LL +L PVA CH
Sbjct: 94  IFNILNKKIYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPKRAPINSTLLKLLFPVALCH 153

Query: 200 ALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMA 259
           ALGHV SNVSFATVAVSF HTIKALEPFFNAAA+QFVLG Q+PL LWLSLAPVV+GVSMA
Sbjct: 154 ALGHVTSNVSFATVAVSFAHTIKALEPFFNAAATQFVLGQQVPLPLWLSLAPVVLGVSMA 213

Query: 260 SLTELSFNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLI 319
           SLTELSFNWTGFI+AMISNI+FTYRSIYSKKAMT MDSTNVYAY SIIAL+ CIPPAV+I
Sbjct: 214 SLTELSFNWTGFINAMISNISFTYRSIYSKKAMTDMDSTNVYAYISIIALIVCIPPAVII 273

Query: 320 EGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKR 379
           EGPQL+Q+GF  AIAKVGL KF+SDLF++G+FYHLYNQ+ATNTLERVAPLTHAVGNVLKR
Sbjct: 274 EGPQLLQHGFNDAIAKVGLTKFVSDLFFVGLFYHLYNQVATNTLERVAPLTHAVGNVLKR 333

Query: 380 VFVIGFSIVVFGNYFT 395
           VFVIGFSI+VFGN  T
Sbjct: 334 VFVIGFSIIVFGNRIT 349

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449433798|ref|XP_004134684.1| PREDICTED: triose phosphate/phosphate translocator, chloroplastic-like [Cucumis sativus]

 Score =  503 bits (1294), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 246/313 (78%), Positives = 273/313 (87%), Gaps = 6/313 (1%)

Query: 80  RRGTVDFPVVSAAAADADGHAHEIEIEVSDGYAEPSKSFGERFPALVTGFFFFMWYFLNV 139
           +R T+  P  +AA++   G +        D    P   F E++PALVTGFFFFMWYFLNV
Sbjct: 68  KRDTIR-PTFAAASSSPAGGSDS----AGDAKVAPV-GFFEKYPALVTGFFFFMWYFLNV 121

Query: 140 IFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCH 199
           IFNILNKK+YNYFPYPYFVSVIHL+VGVVYCL+SW VGLP+RAPI+  LL +L PVAFCH
Sbjct: 122 IFNILNKKIYNYFPYPYFVSVIHLVVGVVYCLISWAVGLPKRAPIDSTLLKLLIPVAFCH 181

Query: 200 ALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMA 259
           ALGHV SNVSFA VAVSFTHTIKALEPFFNAAASQF+LG  IP++LWLSLAPVVIGVSMA
Sbjct: 182 ALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPITLWLSLAPVVIGVSMA 241

Query: 260 SLTELSFNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLI 319
           SLTELSFNWTGFISAMISNI+FTYRSIYSKKAMT MDSTNVYAY SIIALLFCIPPAV++
Sbjct: 242 SLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNVYAYISIIALLFCIPPAVIV 301

Query: 320 EGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKR 379
           EGPQL+++GF  AIAKVGL KF+ DLFW+GMFYHLYNQLATNTLERVAPLTHAVGNVLKR
Sbjct: 302 EGPQLLKFGFNDAIAKVGLTKFVLDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKR 361

Query: 380 VFVIGFSIVVFGN 392
           VFVIGFSI++FGN
Sbjct: 362 VFVIGFSIIIFGN 374

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224125582|ref|XP_002329840.1| predicted protein [Populus trichocarpa] gi|222870902|gb|EEF08033.1| predicted protein [Populus trichocarpa]

 Score =  502 bits (1293), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 243/318 (76%), Positives = 276/318 (86%), Gaps = 6/318 (1%)

Query: 75  SQQIRRRGTVDFPVVSAAAADADGHAHEIEIEVSDGYAEPSKSFGERFPALVTGFFFFMW 134
           S  +  R  + +PV++AA++ A+G          DG   P   F +++PALVTGFFFFMW
Sbjct: 60  SYPVTARKEILWPVMAAASSPAEGSDSS-----GDGKVAPV-GFFDKYPALVTGFFFFMW 113

Query: 135 YFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTP 194
           YFLNVIFNILNKK+YNYFPYPYFVSVIHL VGVVYCLVSW VGLP+RAP++  LL +L P
Sbjct: 114 YFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLVSWAVGLPKRAPMDSNLLKLLIP 173

Query: 195 VAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVI 254
           VA CHALGHV SNVSFA VAVSFTHTIKALEPFFNAAASQF+LG QIP++LWLSLAPVV+
Sbjct: 174 VAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQIPITLWLSLAPVVL 233

Query: 255 GVSMASLTELSFNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIP 314
           GVS+ASLTELSFNWTGFISAMISNI+FTYRSIYSKKAMT MDSTN+YAY SIIAL+ CIP
Sbjct: 234 GVSVASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALIVCIP 293

Query: 315 PAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVG 374
           PA+++EGPQL+++GF   IAKVGL KF+SDLFW+GMFYHLYNQLATNTLERVAPLTHAVG
Sbjct: 294 PAIILEGPQLIKHGFSDGIAKVGLTKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVG 353

Query: 375 NVLKRVFVIGFSIVVFGN 392
           NVLKRVFVIGFSIV+FGN
Sbjct: 354 NVLKRVFVIGFSIVIFGN 371

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	449
TAIR|locus:2161423	415	APE2 "ACCLIMATION OF PHOTOSYNT	0.610	0.660	0.791	1.6e-118
TAIR|locus:2160175	388	GPT1 "glucose 6-phosphate/phos	0.590	0.682	0.438	8.4e-58
TAIR|locus:2036778	388	GPT2 "glucose-6-phosphate/phos	0.559	0.646	0.434	1.4e-55
TAIR|locus:2151381	417	AT5G17630 "AT5G17630" [Arabido	0.594	0.640	0.419	2.6e-54
UNIPROTKB|Q84QU8	407	PPT2 "Phosphoenolpyruvate/phos	0.559	0.616	0.398	6.9e-47
TAIR|locus:2084203	383	PPT2 "phosphoenolpyruvate (pep	0.576	0.676	0.389	4.8e-46
UNIPROTKB|Q69VR7	408	PPT1 "Phosphoenolpyruvate/phos	0.559	0.615	0.394	4.4e-45
UNIPROTKB|Q5VQL3	393	PPT3 "Phosphoenolpyruvate/phos	0.701	0.801	0.345	7.3e-43
TAIR|locus:2145944	408	CUE1 "CAB UNDEREXPRESSED 1" [A	0.587	0.647	0.354	2.8e-41
GENEDB_PFALCIPARUM|PFE0410w	342	PFE0410w "triose or hexose pho	0.599	0.786	0.325	1.2e-35

TAIR|locus:2161423 APE2 "ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 1167 (415.9 bits), Expect = 1.6e-118, P = 1.6e-118
 Identities = 217/274 (79%), Positives = 243/274 (88%)

Query:   106 EVSDGYAEPSKSFGERFPALVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLV 165
             E  D   +    F  ++P LVTGFFFFMWYFLNVIFNILNKK+YNYFPYPYFVSVIHL V
Sbjct:    87 EGGDTAGDAKVGFLAKYPWLVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFV 146

Query:   166 GVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALE 225
             GVVYCL+SW+VGLP+RAPI+  LL +L PVA CHALGHV SNVSFA VAVSFTHTIKALE
Sbjct:   147 GVVYCLISWSVGLPKRAPIDSNLLKVLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALE 206

Query:   226 PFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYRS 285
             PFFNAAASQF++G  IP++LWLSLAPVV+GV+MASLTELSFNW GFISAMISNI+FTYRS
Sbjct:   207 PFFNAAASQFIMGQSIPITLWLSLAPVVLGVAMASLTELSFNWLGFISAMISNISFTYRS 266

Query:   286 IYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDL 345
             I+SKKAMT MDSTNVYAY SIIAL  CIPPA+++EGP+L+ +GF  AIAKVG+ KF+SDL
Sbjct:   267 IFSKKAMTDMDSTNVYAYISIIALFVCIPPAIIVEGPKLLNHGFADAIAKVGMTKFISDL 326

Query:   346 FWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKR 379
             FW+GMFYHLYNQLATNTLERVAPLTHAVGNVLKR
Sbjct:   327 FWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKR 360

GO:0005215 "transporter activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0006810 "transport" evidence=IEA

GO:0015297 "antiporter activity" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0015120 "phosphoglycerate transmembrane transporter activity" evidence=IDA

GO:0015713 "phosphoglycerate transport" evidence=IDA

GO:0015717 "triose phosphate transport" evidence=IMP

GO:0035436 "triose phosphate transmembrane transport" evidence=IDA

GO:0071917 "triose-phosphate transmembrane transporter activity" evidence=IMP;IDA

GO:0009643 "photosynthetic acclimation" evidence=IMP

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

TAIR|locus:2160175 GPT1 "glucose 6-phosphate/phosphate translocator 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
 Identities = 121/276 (43%), Positives = 179/276 (64%)

Query:   109 DGYAEPSKSFGERFPALVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVV 168
             D  A  +KS  E    L  G +F  W+ LNV+FNI NKKV N +PYP+  S + L  G +
Sbjct:    81 DAAAAETKS--EAAKKLKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLAAGSL 138

Query:   169 YCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFF 228
               L+SW VG+ +    + +    L PVA  H +GHV + VS + VAVSFTH IK+ EP F
Sbjct:   139 MMLISWAVGIVETPKTDFDFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAF 198

Query:   229 NAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYRSIYS 288
             +   S+F+LG   P S++LSL P++ G ++++LTEL+FN  GF+ AMISN+AF +R+I+S
Sbjct:   199 SVLVSRFILGETFPTSVYLSLIPIIGGCALSALTELNFNMIGFMGAMISNLAFVFRNIFS 258

Query:   289 KKAMTG--MDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLF 346
             KK M G  +   N YA  S+++LL   P A+ +EGPQ+   G++ A+A VG  +F+   +
Sbjct:   259 KKGMKGKSVSGMNYYACLSMLSLLILTPFAIAVEGPQMWVDGWQTALATVGP-QFV---W 314

Query:   347 WI---GMFYHLYNQLATNTLERVAPLTHAVGNVLKR 379
             W+    +FYHLYNQ++  +L++++PLT +VGN +KR
Sbjct:   315 WVVAQSVFYHLYNQVSYMSLDQISPLTFSVGNTMKR 350

GO:0005215 "transporter activity" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0015152 "glucose-6-phosphate transmembrane transporter activity" evidence=ISS;IDA

GO:0015297 "antiporter activity" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=ISS

GO:0005315 "inorganic phosphate transmembrane transporter activity" evidence=IDA

GO:0007033 "vacuole organization" evidence=IMP

GO:0009553 "embryo sac development" evidence=IMP

GO:0010152 "pollen maturation" evidence=IMP

GO:0015120 "phosphoglycerate transmembrane transporter activity" evidence=IDA

GO:0015713 "phosphoglycerate transport" evidence=IDA

GO:0015714 "phosphoenolpyruvate transport" evidence=IDA

GO:0015760 "glucose-6-phosphate transport" evidence=IDA

GO:0034389 "lipid particle organization" evidence=IMP

GO:0035436 "triose phosphate transmembrane transport" evidence=IDA

GO:0071917 "triose-phosphate transmembrane transporter activity" evidence=IDA

GO:0009624 "response to nematode" evidence=IEP;RCA

GO:0009790 "embryo development" evidence=IMP

GO:0006007 "glucose catabolic process" evidence=RCA

GO:0006863 "purine nucleobase transport" evidence=RCA

GO:0009536 "plastid" evidence=IDA

TAIR|locus:2036778 GPT2 "glucose-6-phosphate/phosphate translocator 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
 Identities = 113/260 (43%), Positives = 170/260 (65%)

Query:   125 LVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPI 184
             L  G +F  W+ LNV+FNI NKKV N FPYP+  S + L  G +  LVSW   +      
Sbjct:    95 LKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIADAPKT 154

Query:   185 NKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLS 244
             + E    L PVA  H +GHV + VS + VAVSFTH IK+ EP F+   S+F +G   PL 
Sbjct:   155 DLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFFMGETFPLP 214

Query:   245 LWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYRSIYSKKAMTG--MDSTNVYA 302
             ++LSL P++ G ++A++TEL+FN TGF+ AMISN+AF +R+I+SKK M G  +   N YA
Sbjct:   215 VYLSLLPIIGGCALAAITELNFNITGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYA 274

Query:   303 YTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWI---GMFYHLYNQLA 359
               S+++L+   P ++ +EGPQ+   G++ A+++VG   F+   +W+    +FYHLYNQ++
Sbjct:   275 CLSMMSLVILTPFSIAVEGPQMWAAGWQNAVSQVGP-NFV---WWVVAQSVFYHLYNQVS 330

Query:   360 TNTLERVAPLTHAVGNVLKR 379
               +L++++PLT ++GN +KR
Sbjct:   331 YMSLDQISPLTFSIGNTMKR 350

GO:0005215 "transporter activity" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0015152 "glucose-6-phosphate transmembrane transporter activity" evidence=ISS;IDA

GO:0015297 "antiporter activity" evidence=ISS

GO:0015712 "hexose phosphate transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=ISS

GO:0005315 "inorganic phosphate transmembrane transporter activity" evidence=IDA

GO:0007276 "gamete generation" evidence=IMP

GO:0015120 "phosphoglycerate transmembrane transporter activity" evidence=IDA

GO:0015713 "phosphoglycerate transport" evidence=IDA

GO:0015714 "phosphoenolpyruvate transport" evidence=IDA

GO:0015760 "glucose-6-phosphate transport" evidence=IDA

GO:0035436 "triose phosphate transmembrane transport" evidence=IDA

GO:0071917 "triose-phosphate transmembrane transporter activity" evidence=IDA

GO:0009744 "response to sucrose stimulus" evidence=IEP

GO:0009749 "response to glucose stimulus" evidence=IEP

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0009624 "response to nematode" evidence=IEP

GO:0009643 "photosynthetic acclimation" evidence=IMP

GO:0010109 "regulation of photosynthesis" evidence=IMP

GO:0015979 "photosynthesis" evidence=IMP

GO:0080167 "response to karrikin" evidence=IEP

TAIR|locus:2151381 AT5G17630 "AT5G17630" [Arabidopsis thaliana (taxid:3702)]

 Score = 561 (202.5 bits), Expect = 2.6e-54, P = 2.6e-54
 Identities = 118/281 (41%), Positives = 171/281 (60%)

Query:   106 EVSD-GYAEPSKSFGERFPALVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLL 164
             E SD G AE  +   ++   L  G  F +WYF N++FNI NKK  N FPYP+ ++   L 
Sbjct:    93 EKSDLGEAEKKE---KKAKTLQLGIVFGLWYFQNIVFNIFNKKALNVFPYPWLLASFQLF 149

Query:   165 VGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKAL 224
              G ++ LV W+  L     I+K  ++ L   A  H +GH+ + VSF+ VAVSFTH IK+ 
Sbjct:   150 AGSIWMLVLWSFKLYPCPKISKPFIIALLGPALFHTIGHISACVSFSKVAVSFTHVIKSA 209

Query:   225 EPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYR 284
             EP F+   S  +LG   PL++WLS+ P+V+G S+A++TE+SFN  G   AMISN+ F  R
Sbjct:   210 EPVFSVIFSS-LLGDSYPLAVWLSILPIVMGCSLAAVTEVSFNLGGLSGAMISNVGFVLR 268

Query:   285 SIYSKKAMTG---MDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKF 341
             +IYSK+++     +D  N+Y   SI++LL+  P A+ +EG   +  G+  AIA VG    
Sbjct:   269 NIYSKRSLQSFKEIDGLNLYGCISILSLLYLFPVAIFVEGSHWVP-GYHKAIASVGTPST 327

Query:   342 LSDLFWI---GMFYHLYNQLATNTLERVAPLTHAVGNVLKR 379
                 FW+   G+FYHLYNQ +   L+ ++PLT +VGN +KR
Sbjct:   328 F--YFWVLLSGVFYHLYNQSSYQALDEISPLTFSVGNTMKR 366

GO:0005355 "glucose transmembrane transporter activity" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0015297 "antiporter activity" evidence=ISS

GO:0015712 "hexose phosphate transport" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0015120 "phosphoglycerate transmembrane transporter activity" evidence=IDA

GO:0015713 "phosphoglycerate transport" evidence=IDA

GO:0035436 "triose phosphate transmembrane transport" evidence=IDA

GO:0071917 "triose-phosphate transmembrane transporter activity" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

GO:0009536 "plastid" evidence=IDA

UNIPROTKB|Q84QU8 PPT2 "Phosphoenolpyruvate/phosphate translocator 2, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
 Identities = 104/261 (39%), Positives = 155/261 (59%)

Query:   125 LVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPI 184
             L  G  F +WY  N+ FNI NK+V   FPYP  ++ +   VG V  L  W  G+ +R  I
Sbjct:   105 LQLGALFGLWYLFNIYFNIYNKQVLKVFPYPINITTVQFAVGTVVALFMWITGILRRPKI 164

Query:   185 NKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLS 244
             +   L  + P+A  H +G++ +N+S   VAVSFTHTIKA+EPFF+   S   LG ++P +
Sbjct:   165 SGAQLFAILPLAVVHTMGNLFTNMSLGKVAVSFTHTIKAMEPFFSVLLSAIFLG-ELP-T 222

Query:   245 LW--LSLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYRSIYSKKAMT----GMDST 298
             +W  LSL P+V GV++ASLTE SFNW GF SAM SN+ F  R++ SKK M      +D+ 
Sbjct:   223 VWVILSLLPIVGGVALASLTEASFNWAGFWSAMASNVTFQSRNVLSKKLMVKKEESLDNI 282

Query:   299 NVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQL 358
             N+++  ++++     P A L EG ++     ++A   V   + L+      + +H Y Q+
Sbjct:   283 NLFSIITVMSFFLLAPVAFLTEGIKITPTVLQSAGLNVK--QVLTRSLLAALCFHAYQQV 340

Query:   359 ATNTLERVAPLTHAVGNVLKR 379
             +   L RV+P+TH+VGN +KR
Sbjct:   341 SYMILARVSPVTHSVGNCVKR 361

GO:0009670 "triose-phosphate:phosphate antiporter activity" evidence=IDA

GO:0015121 "phosphoenolpyruvate:phosphate antiporter activity" evidence=IDA

GO:0015714 "phosphoenolpyruvate transport" evidence=IDA

GO:0035436 "triose phosphate transmembrane transport" evidence=IDA

TAIR|locus:2084203 PPT2 "phosphoenolpyruvate (pep)/phosphate translocator 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
 Identities = 104/267 (38%), Positives = 156/267 (58%)

Query:   119 GERFPALVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGL 178
             G     L  G  F +WY LN+ +NI NK+V   +PYP  V+   L  G +   + W + L
Sbjct:    71 GSLVKGLKLGGMFGVWYLLNIYYNIFNKQVLRVYPYPATVTAFQLGCGTLMIAIMWLLKL 130

Query:   179 PQRAPINKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLG 238
               R   +     ++  +A  H LG++++NVS   V VSFTHTIKA+EPFF    S  +LG
Sbjct:   131 HPRPKFSPSQFTVIVQLAVAHTLGNLLTNVSLGRVNVSFTHTIKAMEPFFTVLLSVLLLG 190

Query:   239 HQIPLSLWL--SLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYRSIYSKKAMTG-- 294
              + P SLW+  SL P+V GVS+AS TE SFNW GF SAM SN+    R++ SKK M G  
Sbjct:   191 -EWP-SLWIVCSLLPIVAGVSLASFTEASFNWIGFCSAMASNVTNQSRNVLSKKFMVGKD 248

Query:   295 -MDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAK-VGLFKFLSDLFWIGMFY 352
              +D+ N+++  +II+ +  +P A+LI+G ++     + A ++ + + +F       G+  
Sbjct:   249 ALDNINLFSIITIISFILLVPLAILIDGFKVTPSHLQVATSQGLSVKEFCIMSLLAGVCL 308

Query:   353 HLYNQLATNTLERVAPLTHAVGNVLKR 379
             H Y Q++   LE V+P+TH+VGN +KR
Sbjct:   309 HSYQQVSYMILEMVSPVTHSVGNCVKR 335

GO:0005215 "transporter activity" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0015297 "antiporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0015120 "phosphoglycerate transmembrane transporter activity" evidence=IDA

GO:0015121 "phosphoenolpyruvate:phosphate antiporter activity" evidence=IDA

GO:0015713 "phosphoglycerate transport" evidence=IDA

GO:0015714 "phosphoenolpyruvate transport" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

GO:0009718 "anthocyanin-containing compound biosynthetic process" evidence=RCA

UNIPROTKB|Q69VR7 PPT1 "Phosphoenolpyruvate/phosphate translocator 1, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 474 (171.9 bits), Expect = 4.4e-45, P = 4.4e-45
 Identities = 103/261 (39%), Positives = 150/261 (57%)

Query:   125 LVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPI 184
             L  G  F +WY  N+ FNI NK+V   FPYP  ++ +   VG V  L  W  G+ +R  I
Sbjct:   106 LQLGALFGLWYLFNIYFNIYNKQVLKVFPYPINITNVQFAVGTVIALFMWITGILKRPKI 165

Query:   185 NKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLS 244
             +   L  + P+A  H +G++ +N+S   VAVSFTHTIKA+EPFF+   S   LG      
Sbjct:   166 SGAQLAAILPLAMVHTMGNLFTNMSLGKVAVSFTHTIKAMEPFFSVLLSALFLGEMPTPF 225

Query:   245 LWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYRSIYSKKAMT----GMDSTNV 300
             + LSL P+V GV++ASLTE SFNW GF SAM SN+ F  R++ SKK M      +D+  +
Sbjct:   226 VVLSLVPIVGGVALASLTEASFNWAGFWSAMASNVTFQSRNVLSKKLMVKKEESLDNITL 285

Query:   301 YAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGL-FKFLSDLFWIGMF-YHLYNQL 358
             ++  ++++     P  +L EG ++     ++A    GL  K +     I  F +H Y Q+
Sbjct:   286 FSIITVMSFFLLAPVTLLTEGVKVTPTVLQSA----GLNLKQIYTRSLIAAFCFHAYQQV 341

Query:   359 ATNTLERVAPLTHAVGNVLKR 379
             +   L RV+P+TH+VGN +KR
Sbjct:   342 SYMILARVSPVTHSVGNCVKR 362

GO:0009670 "triose-phosphate:phosphate antiporter activity" evidence=IDA

GO:0015121 "phosphoenolpyruvate:phosphate antiporter activity" evidence=IDA

GO:0015714 "phosphoenolpyruvate transport" evidence=IDA

GO:0035436 "triose phosphate transmembrane transport" evidence=IDA

UNIPROTKB|Q5VQL3 PPT3 "Phosphoenolpyruvate/phosphate translocator 3, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 453 (164.5 bits), Expect = 7.3e-43, P = 7.3e-43
 Identities = 112/324 (34%), Positives = 163/324 (50%)

Query:    63 SFCGEPLKFSGGSQQIRRRG--TVDFPVVSXXXXXXXX-XXXEIEIEVSDGYAEPSKSFG 119
             SF G     +G +  +R RG   +  P++S            E  +   D  A   +  G
Sbjct:    28 SFSGGGGIVAGAALPLRVRGGQLMSLPLLSGGRAVTARVAAAEAPLPADDADAAAGRERG 87

Query:   120 ERFPALVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLP 179
                     G     WY LN+ FNI NK+V    P+PY ++   L  G     + W + L 
Sbjct:    88 ALAETAQLGAMIVAWYLLNIYFNIYNKQVLQPLPFPYTITAFQLAFGSFVIFLMWALKLH 147

Query:   180 QRAPINKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGH 239
                 I+   L  + P+A  H LG V +N+S + VAVSFTHTIKA EPFF    S F LG 
Sbjct:   148 PAPRISISQLAKIAPLAAGHMLGTVFTNMSLSKVAVSFTHTIKASEPFFTVLLSAFFLGE 207

Query:   240 QIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYRSIYSKKAMTG----M 295
                L +  SL P+V GV++ASLTELSFNW GF SAM SN+ +  R++ SKK + G    +
Sbjct:   208 TPSLLVLGSLVPIVGGVALASLTELSFNWIGFWSAMASNLLYQSRNVLSKKLLGGEEEAL 267

Query:   296 DSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLY 355
             D  N+++  +I++ L  +P  +  EG +    G+  +   + L +        G  +H Y
Sbjct:   268 DDINLFSILTILSFLLSLPLMLFSEGVKFSP-GYLRSTG-LNLQELCVRAALAGFCFHGY 325

Query:   356 NQLATNTLERVAPLTHAVGNVLKR 379
              +L+   L RV+P+TH+V N +KR
Sbjct:   326 QKLSYLILARVSPVTHSVANCVKR 349

GO:0015121 "phosphoenolpyruvate:phosphate antiporter activity" evidence=IDA

GO:0015714 "phosphoenolpyruvate transport" evidence=IDA

GO:0035436 "triose phosphate transmembrane transport" evidence=IDA

GO:0071917 "triose-phosphate transmembrane transporter activity" evidence=IDA

TAIR|locus:2145944 CUE1 "CAB UNDEREXPRESSED 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 438 (159.2 bits), Expect = 2.8e-41, P = 2.8e-41
 Identities = 97/274 (35%), Positives = 152/274 (55%)

Query:   112 AEPSKSFGERFPALVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCL 171
             AE   + G+    L  G  F MWY  N+ FNI NK+V      P  V+++   VG V   
Sbjct:    93 AEEGDNSGKLTKVLELGLLFAMWYLFNIYFNIYNKQVLKALHAPMTVTLVQFAVGSVLIT 152

Query:   172 VSWTVGLPQRAPINKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAA 231
             + W + L +R  I+   L  + P+A  H LG++ +N+S   V+VSFTHTIKA+EPFF+  
Sbjct:   153 IMWVLNLYKRPKISGAQLAAILPLAVVHTLGNLFTNMSLGKVSVSFTHTIKAMEPFFSVL 212

Query:   232 ASQFVLGHQIPLSLWL--SLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYRSIYSK 289
              S   LG + P   W+  ++ P+V GV++AS++E+SFNW GF SAM SN+    R++ SK
Sbjct:   213 LSAMFLGEK-PTP-WVLGAIVPIVGGVALASISEVSFNWAGFSSAMASNLTNQSRNVLSK 270

Query:   290 KAMT----GMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDL 345
             K M      +D+  +++  ++++L+   P     EG +      ++A   V    +   L
Sbjct:   271 KVMVKKDDSLDNITLFSIITLMSLVLMAPVTFFTEGIKFTPSYIQSAGVNVKQI-YTKSL 329

Query:   346 FWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKR 379
                 + +H Y Q++   L RV+P+TH+VGN +KR
Sbjct:   330 I-AALCFHAYQQVSYMILARVSPVTHSVGNCVKR 362

GO:0005215 "transporter activity" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0015297 "antiporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0009528 "plastid inner membrane" evidence=TAS

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0015120 "phosphoglycerate transmembrane transporter activity" evidence=IDA

GO:0015121 "phosphoenolpyruvate:phosphate antiporter activity" evidence=IDA

GO:0015713 "phosphoglycerate transport" evidence=IDA

GO:0015714 "phosphoenolpyruvate transport" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009536 "plastid" evidence=IDA

GENEDB_PFALCIPARUM|PFE0410w PFE0410w "triose or hexose phosphate / phosphate translocator, putative" [Plasmodium falciparum (taxid:5833)]

 Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
 Identities = 93/286 (32%), Positives = 150/286 (52%)

Query:   107 VSDGYAEPSKSFGERFPALVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVG 166
             V D   +    + + F  L     F  WY LNV++N+ NKK  N    P+F+S + L VG
Sbjct:    25 VGDNKLKSKGIYHKLFEKLKLALLFLTWYTLNVLYNVDNKKALNMVKLPWFISSMQLYVG 84

Query:   167 VVYCLVSWTVGLPQRAPI-NKELLV--ILTPVAFCHALGHVMSNVSFATVAVSFTHTIKA 223
              ++  + W  G+ +   I + ++ +  IL   + CH   H  + ++ +  +VSFTH +KA
Sbjct:    85 WIFIFIYWISGMKKIPKIYSYDIFIRNILIQ-SVCHIFVHFGAVMAMSATSVSFTHVVKA 143

Query:   224 LEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTY 283
              EP F A  S  +L   + ++ +++L  +V GV  AS+ EL F W  F  A +SN   + 
Sbjct:   144 CEPVFTAIFSILLLKQYLKINKYIALLIIVGGVVCASMKELHFTWIAFWCATLSNFGSSI 203

Query:   284 RSIYSKKAMT-------GMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKV 336
             RSIY+KK MT        ++++N+YA+ +II+ L  +P  +  EG +   Y F       
Sbjct:   204 RSIYAKKMMTQKSLIGENLNASNIYAFITIISALISLPLVLAFEGKET--YNFLVNYQGT 261

Query:   337 GLFKFLSDLFWI---GMFYHLYNQLATNTLERVAPLTHAVGNVLKR 379
               + F   +F I   GM+Y+  N++A   LERV  +THA+ N +KR
Sbjct:   262 N-YTFKDVIFKIILSGMWYYFNNEVAFMCLERVNQITHALANSIKR 306

GO:0008524 "glucose 6-phosphate:phosphate antiporter activity" evidence=ISS

GO:0020011 "apicoplast" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P11869	TPT_SPIOL	No assigned EC number	0.8105	0.6347	0.7054	N/A	no
Q9ZSR7	TPT_ARATH	No assigned EC number	0.7597	0.6703	0.7341	yes	no
P49133	TPT_MAIZE	No assigned EC number	0.8237	0.6191	0.6797	N/A	no
P21727	TPT_PEA	No assigned EC number	0.8369	0.6146	0.6865	N/A	no
P49131	TPT_FLAPR	No assigned EC number	0.8140	0.6325	0.6960	N/A	no
P52177	TPT1_BRAOB	No assigned EC number	0.7839	0.6391	0.7051	N/A	no
P49132	TPT_FLATR	No assigned EC number	0.7953	0.6458	0.7125	N/A	no
Q9FTT3	TPT_ORYSJ	No assigned EC number	0.8402	0.6391	0.6882	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	449
TIGR00817	302	TIGR00817, tpt, Tpt phosphate/phosphoenolpyruvate	1e-123
PTZ00343	350	PTZ00343, PTZ00343, triose or hexose phosphate/pho	1e-59
pfam03151	149	pfam03151, TPT, Triose-phosphate Transporter famil	3e-25
COG0697	292	COG0697, RhaT, Permeases of the drug/metabolite tr	5e-07
TIGR00950	260	TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Tran	3e-04

>gnl|CDD|129898 TIGR00817, tpt, Tpt phosphate/phosphoenolpyruvate translocator

 Score =  360 bits (926), Expect = e-123
 Identities = 153/271 (56%), Positives = 191/271 (70%), Gaps = 3/271 (1%)

Query: 125 LVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPI 184
           L TG  F +WYFLNV FNI NKK+ N FPYPYF ++I L VG +YCL+SW+ GLP+R  I
Sbjct: 1   LQTGLLFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKI 60

Query: 185 NKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLS 244
           +  LL +L PVA  H +GHV SNVS + VAVSFTHTIKA+EPFF+   S F LG + P +
Sbjct: 61  SSALLKLLLPVAIVHTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPST 120

Query: 245 LWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYRSIYSKKAMTG--MDSTNVYA 302
           LWLSL P+V GV++AS TELSFNW GF+SAMISNI F  R+I+SKKAMT   +D TN+YA
Sbjct: 121 LWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYA 180

Query: 303 YTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGM-FYHLYNQLATN 361
           Y SI++L    PPA + EGP  + +GF  AI+ V + K  +      M F+H Y Q+A  
Sbjct: 181 YISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFM 240

Query: 362 TLERVAPLTHAVGNVLKRVFVIGFSIVVFGN 392
            L RV+PLTH+VGN +KRV VI  SI+ FG 
Sbjct: 241 LLGRVSPLTHSVGNCMKRVVVIVVSILFFGT 271

The 6-8 TMS Triose-phosphate Transporter (TPT) Family (TC 2.A.7.9)Functionally characterized members of the TPT family are derived from the inner envelope membranes of chloroplasts and nongreen plastids of plants. However,homologues are also present in yeast. Saccharomyces cerevisiae has three functionally uncharacterized TPT paralogues encoded within its genome. Under normal physiologicalconditions, chloroplast TPTs mediate a strict antiport of substrates, frequently exchanging an organic three carbon compound phosphate ester for inorganic phosphate (Pi).Normally, a triose-phosphate, 3-phosphoglycerate, or another phosphorylated C3 compound made in the chloroplast during photosynthesis, exits the organelle into thecytoplasm of the plant cell in exchange for Pi. However, experiments with reconstituted translocator in artificial membranes indicate that transport can also occur by achannel-like uniport mechanism with up to 10-fold higher transport rates. Channel opening may be induced by a membrane potential of large magnitude and/or by high substrateconcentrations. Nongreen plastid and chloroplast carriers, such as those from maize endosperm and root membranes, mediate transport of C3 compounds phosphorylated atcarbon atom 2, particularly phosphenolpyruvate, in exchange for Pi. These are the phosphoenolpyruvate:Pi antiporters (PPT). Glucose-6-P has also been shown to be asubstrate of some plastid translocators (GPT). The three types of proteins (TPT, PPT and GPT) are divergent in sequence as well as substrate specificity, but their substratespecificities overlap [Hypothetical proteins, Conserved]. Length = 302

>gnl|CDD|240371 PTZ00343, PTZ00343, triose or hexose phosphate/phosphate translocator; Provisional

 Score =  198 bits (505), Expect = 1e-59
 Identities = 96/277 (34%), Positives = 143/277 (51%), Gaps = 11/277 (3%)

Query: 131 FFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQ--RAPINKEL 188
           F  WY LNV++ + NK   N  P P+ +S + L VG ++ L+ W  G  +  R    K  
Sbjct: 54  FLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLF 113

Query: 189 LVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLS 248
           L    P   CH   H  + +S    AVSFTH +KA EP F A  S   L   + L  +LS
Sbjct: 114 LKNFLPQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLS 173

Query: 249 LAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYRSIYSKKAM-------TGMDSTNVY 301
           L P+V GV++AS+ EL F W  F  AM+SN+  + RSI++KK M         + ++N+Y
Sbjct: 174 LIPIVGGVALASVKELHFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIY 233

Query: 302 AYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVG--LFKFLSDLFWIGMFYHLYNQLA 359
              ++IA L  +P  +  EG + +                  +  +F+ G++Y+LYN++A
Sbjct: 234 MLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIFFSGVWYYLYNEVA 293

Query: 360 TNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA 396
              L +V  +THAV N LKRV +I  SI++F    T 
Sbjct: 294 FYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTL 330

Length = 350

>gnl|CDD|217390 pfam03151, TPT, Triose-phosphate Transporter family

 Score =  100 bits (251), Expect = 3e-25
 Identities = 39/131 (29%), Positives = 62/131 (47%), Gaps = 6/131 (4%)

Query: 270 GFISAMISNIAFTYRSIYSKKAMTG-----MDSTNVYAYTSIIALLFCIPPAVLIEGPQL 324
           GFI A+ ++  F  R I S+K +       ++   +  Y S +A +  +P  +  EG +L
Sbjct: 1   GFILALAASALFALRLILSQKLLKKKKGTKLNVLELLYYLSPVAFIVLLPGLLFSEGFKL 60

Query: 325 MQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIG 384
            ++  K           L  L   G+   LYN  A   L R +PLT +V   +KRV VI 
Sbjct: 61  GKFILKFFGDLKTSRYVLL-LLLSGVLAFLYNLSAFGLLGRTSPLTSSVAGTVKRVVVIV 119

Query: 385 FSIVVFGNYFT 395
            S+++FG+  T
Sbjct: 120 LSVIIFGDPVT 130

This family includes transporters with a specificity for triose phosphate. Length = 149

>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

 Score = 50.6 bits (121), Expect = 5e-07
 Identities = 35/203 (17%), Positives = 69/203 (33%), Gaps = 4/203 (1%)

Query: 124 ALVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAP 183
            L+      +W  L  +  I  K          F + +  L+  +  L    +      P
Sbjct: 5   LLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRP 64

Query: 184 INKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAA-ASQFVLGHQIP 242
             +  L++L       AL  ++  ++    + S    I  L P F A  A   +LG ++ 
Sbjct: 65  ALRPWLLLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLS 124

Query: 243 LSLWLSLAPVVIGVSMASLTEL---SFNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTN 299
           L   L +   + GV +  L        +  G + A+ + + +   +   K+       T 
Sbjct: 125 LLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAAALLWALYTALVKRLSRLGPVTL 184

Query: 300 VYAYTSIIALLFCIPPAVLIEGP 322
                 ++ALL  +   +   G 
Sbjct: 185 ALLLQLLLALLLLLLFFLSGFGA 207

Length = 292

>gnl|CDD|233205 TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Transporter

 Score = 41.9 bits (99), Expect = 3e-04
 Identities = 29/171 (16%), Positives = 62/171 (36%), Gaps = 8/171 (4%)

Query: 156 YFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHVMSNVSFATVAV 215
           YF     L+  ++  L       P +  +   LL++    A    + +V+  V+   + V
Sbjct: 19  YFAVFRRLIFALLLLLPLLRRRPPLKRLLR--LLLLG---ALQIGVFYVLYFVAVKRLPV 73

Query: 216 SFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMA-SLTELSFNWTGFISA 274
                +  L P +    S  +   +    + L+    + G  +  S   LS N  G +  
Sbjct: 74  GEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLG 133

Query: 275 MISNIAFTYRSIYSKKAMT--GMDSTNVYAYTSIIALLFCIPPAVLIEGPQ 323
           + S I+F   ++  K+ +   G +      +  ++  L  +P A  +    
Sbjct: 134 LGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP 184

[Transport and binding proteins, Amino acids, peptides and amines]. Length = 260

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	449
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	100.0
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	100.0
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	100.0
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.95
PLN00411	358	nodulin MtN21 family protein; Provisional	99.95
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.95
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.92
PRK11689	295	aromatic amino acid exporter; Provisional	99.92
PRK11272	292	putative DMT superfamily transporter inner membran	99.91
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.9
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.9
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.9
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.88
PRK15430	296	putative chloramphenical resistance permease RarD;	99.87
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.87
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.83
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.82
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.78
KOG1580	337	consensus UDP-galactose transporter related protei	99.74
KOG1582	367	consensus UDP-galactose transporter related protei	99.74
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.74
KOG1581	327	consensus UDP-galactose transporter related protei	99.73
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.69
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.64
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.62
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.58
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.57
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.45
COG2962	293	RarD Predicted permeases [General function predict	99.45
KOG2765	416	consensus Predicted membrane protein [Function unk	99.44
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.38
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.34
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.16
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	98.95
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.87
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	98.86
COG2510	140	Predicted membrane protein [Function unknown]	98.85
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.83
KOG2766	336	consensus Predicted membrane protein [Function unk	98.71
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	98.67
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.54
COG2510	140	Predicted membrane protein [Function unknown]	98.46
PRK15430	296	putative chloramphenical resistance permease RarD;	98.43
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.41
PLN00411	358	nodulin MtN21 family protein; Provisional	98.36
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.33
PRK11689	295	aromatic amino acid exporter; Provisional	98.26
PRK11272	292	putative DMT superfamily transporter inner membran	98.25
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.16
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.16
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.07
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	97.93
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	97.85
PRK13499	345	rhamnose-proton symporter; Provisional	97.69
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.69
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	97.68
COG0697	292	RhaT Permeases of the drug/metabolite transporter	97.68
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	97.66
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	97.48
COG2962	293	RarD Predicted permeases [General function predict	97.41
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.35
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	97.14
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	97.08
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.0
PF13536	113	EmrE: Multidrug resistance efflux transporter	96.92
PRK09541	110	emrE multidrug efflux protein; Reviewed	96.92
PRK10650	109	multidrug efflux system protein MdtI; Provisional	96.84
PRK11431	105	multidrug efflux system protein; Provisional	96.83
KOG2922	335	consensus Uncharacterized conserved protein [Funct	96.49
COG2076	106	EmrE Membrane transporters of cations and cationic	96.49
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	96.15
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	96.01
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	95.96
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	95.86
PRK13499	345	rhamnose-proton symporter; Provisional	95.61
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	95.6
PRK09541	110	emrE multidrug efflux protein; Reviewed	95.55
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	95.54
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	95.53
PRK10650	109	multidrug efflux system protein MdtI; Provisional	95.46
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	95.39
PRK11431	105	multidrug efflux system protein; Provisional	95.32
COG2076	106	EmrE Membrane transporters of cations and cationic	95.3
KOG4510	346	consensus Permease of the drug/metabolite transpor	94.98
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	94.78
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	94.55
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	94.55
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	93.29
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	91.15
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	90.74
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	90.09
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	88.83
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	87.97
KOG1581	327	consensus UDP-galactose transporter related protei	85.4
KOG2765	416	consensus Predicted membrane protein [Function unk	84.89
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	82.46
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	80.42

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=100.00  E-value=8.8e-40  Score=331.61  Aligned_cols=290  Identities=33%  Similarity=0.584  Sum_probs=252.9

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHHHHH
Q 013132          123 PALVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPIN--KELLVILTPVAFCHA  200 (449)
Q Consensus       123 ~~l~i~~~~~~w~~~s~~~~i~nK~~l~~fp~P~~lt~~r~l~~~l~lli~~~~~~~~~~~~~--~~~~~~~l~~gl~~~  200 (449)
                      +.+++..+|+.||.+|+.+++.||++++.+|+|++++.+|++++++++.+.|..+.+++++.+  +++++.++++|+++.
T Consensus        46 ~~~~~~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~  125 (350)
T PTZ00343         46 FKWKLALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHL  125 (350)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence            588999999999999999999999999999999999999999999887777765554444443  458999999999998


Q ss_pred             HHHHHHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccccccccHHHHHHHHHHHHH
Q 013132          201 LGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIA  280 (449)
Q Consensus       201 ~~~~~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e~~f~~~G~l~~l~s~l~  280 (449)
                      ..+...+.|++++++++++++|+++|+|+++++++++|||++++++++++++++|+++++.+|.++++.|++++++|+++
T Consensus       126 ~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~~~  205 (350)
T PTZ00343        126 FVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSNLG  205 (350)
T ss_pred             HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHHHHH
Confidence            88888899999999999999999999999999999999999999999999999999999988999999999999999999


Q ss_pred             HHHHHHHHHhhhcC-------CChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHH---HHhhhchhHHHHHHHHHHH
Q 013132          281 FTYRSIYSKKAMTG-------MDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKA---AIAKVGLFKFLSDLFWIGM  350 (449)
Q Consensus       281 ~a~~~V~~kk~~~~-------~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~---~~~~~~~~~~~~~l~~~gv  350 (449)
                      +++|+++.||.+++       +++.+.+.++++++.++++|+..+.|++.... .+..   ......+..++..++.+++
T Consensus       206 ~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~-~~~~~~~~~~~~~~~~~l~~i~~s~l  284 (350)
T PTZ00343        206 SSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVP-VWTNYTANMTNYTKGIIIFKIFFSGV  284 (350)
T ss_pred             HHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH-HHHHhhhcccccchHHHHHHHHHHHH
Confidence            99999999998864       45778888889999999999988777653221 1111   0111122233445677899


Q ss_pred             HHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhhh
Q 013132          351 FYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSNI  413 (449)
Q Consensus       351 ~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~~  413 (449)
                      +++++|.++|.++++++|+++++.+++||++++++|+++|||++++ +.+|+++++.|+++|++
T Consensus       285 ~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~  348 (350)
T PTZ00343        285 WYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSL  348 (350)
T ss_pred             HHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhh
Confidence            9999999999999999999999999999999999999999999998 68999999999999976

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=100.00  E-value=1e-38  Score=317.53  Aligned_cols=290  Identities=53%  Similarity=0.897  Sum_probs=247.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 013132          125 LVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHV  204 (449)
Q Consensus       125 l~i~~~~~~w~~~s~~~~i~nK~~l~~fp~P~~lt~~r~l~~~l~lli~~~~~~~~~~~~~~~~~~~~l~~gl~~~~~~~  204 (449)
                      +++++++++||.+|+.++++||++++++++|+.+++.|++++.+.+.+.+..+.+++++.++++|+.+++.|++++..+.
T Consensus         1 ~~~~~~~~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   80 (302)
T TIGR00817         1 LQTGLLFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGHV   80 (302)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999999988776666545555566788999999999999988999


Q ss_pred             HHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccccccccHHHHHHHHHHHHHHHHH
Q 013132          205 MSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYR  284 (449)
Q Consensus       205 ~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e~~f~~~G~l~~l~s~l~~a~~  284 (449)
                      +.|+|++|+++++++++++++|+|+++++++++|||++++++++++++++|+++....|.+++..|++++++++++|+++
T Consensus        81 ~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~  160 (302)
T TIGR00817        81 TSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSR  160 (302)
T ss_pred             HHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999887777778889999999999999999


Q ss_pred             HHHHHhhhc--CCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHHHHHHHH-HHHHHHHHHHH
Q 013132          285 SIYSKKAMT--GMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGM-FYHLYNQLATN  361 (449)
Q Consensus       285 ~V~~kk~~~--~~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv-~~~~~~~~~~~  361 (449)
                      .++.||.++  ++|++++..|++..+.+.++|++...|++.....++.+..........+...+..+. +++.+|...+.
T Consensus       161 ~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (302)
T TIGR00817       161 NIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFM  240 (302)
T ss_pred             HHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999988  789999999999999999999988777544322222111001111112222233333 55667777888


Q ss_pred             HhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhhhh
Q 013132          362 TLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSNIR  414 (449)
Q Consensus       362 ~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~~~  414 (449)
                      .++++||.++++.++++|++++++|++++||++++ +.+|+++++.|+++|++.
T Consensus       241 ~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~  294 (302)
T TIGR00817       241 LLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRV  294 (302)
T ss_pred             HHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999998 688999999999999875

specificities overlap.

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=100.00  E-value=2.9e-41  Score=332.45  Aligned_cols=287  Identities=38%  Similarity=0.530  Sum_probs=256.4

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHh--hCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHHHHHH
Q 013132          123 PALVTGFFFFMWYFLNVIFNILNKKVYN--YFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPI-NKELLVILTPVAFCH  199 (449)
Q Consensus       123 ~~l~i~~~~~~w~~~s~~~~i~nK~~l~--~fp~P~~lt~~r~l~~~l~lli~~~~~~~~~~~~-~~~~~~~~l~~gl~~  199 (449)
                      +.+..+.++..||+.|++++++||++++  +||+|++++.+|++++.+..++.+..+..++.++ ++..++.++++|+++
T Consensus        14 ~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~   93 (316)
T KOG1441|consen   14 KILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVF   93 (316)
T ss_pred             hhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHH
Confidence            3778889999999999999999999999  8999999999999999999988888887776665 345899999999999


Q ss_pred             HHHHHHHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccccccccHHHHHHHHHHHH
Q 013132          200 ALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNI  279 (449)
Q Consensus       200 ~~~~~~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e~~f~~~G~l~~l~s~l  279 (449)
                      +++++++|.|+.|+++|++|++|+++|+|++++++++.+|+.+++.++++++++.|+++++.+|.+||+.|++.++++++
T Consensus        94 ~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a~~s~~  173 (316)
T KOG1441|consen   94 CISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISAMISNL  173 (316)
T ss_pred             HHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhhc----CCChHHHHHHHHHHHHHHHH-HHHHHhhchhhhhhhHHHHHhhhchhHHHHHHHHHHHHHHH
Q 013132          280 AFTYRSIYSKKAMT----GMDSTNVYAYTSIIALLFCI-PPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHL  354 (449)
Q Consensus       280 ~~a~~~V~~kk~~~----~~~~~~l~~~~s~~s~l~Ll-p~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~  354 (449)
                      +.+++++++|+.++    ++|++++++|+++++.+.++ |+....|+... . .+..  ..+.. .++..++. .+++|+
T Consensus       174 ~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~-~-~~~~--~~~~~-~~~~~~~~-sv~~f~  247 (316)
T KOG1441|consen  174 AFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKF-V-GFLT--APWFV-TFLILLLN-SVLAFL  247 (316)
T ss_pred             HHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccce-e-eeec--cccch-hhHHHHHH-HHHHHH
Confidence            99999999999884    47999999999999999999 88887777654 1 1110  01111 13333333 499999


Q ss_pred             HHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhhhhh
Q 013132          355 YNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSNIRF  415 (449)
Q Consensus       355 ~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~~~~  415 (449)
                      +|+..|++++++||+|++++|++|++++++.|+++|+|++++ +..|..+.++|+++|++..
T Consensus       248 ~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k  309 (316)
T KOG1441|consen  248 LNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAK  309 (316)
T ss_pred             HHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999998 5889999999999998873

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.95  E-value=2e-26  Score=220.18  Aligned_cols=287  Identities=18%  Similarity=0.243  Sum_probs=241.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHH-hCC---CCCCCCCH-HHHHHHHHHHHHHH
Q 013132          126 VTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWT-VGL---PQRAPINK-ELLVILTPVAFCHA  200 (449)
Q Consensus       126 ~i~~~~~~w~~~s~~~~i~nK~~l~~fp~P~~lt~~r~l~~~l~lli~~~-~~~---~~~~~~~~-~~~~~~l~~gl~~~  200 (449)
                      .+..++.+||+++++.+.++|+.-.+|++|++++.+|+++-.++...... .+.   +++...++ ++.+.+.|.|+..+
T Consensus        16 ~~L~lVl~yY~~Si~Ltf~~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalata   95 (349)
T KOG1443|consen   16 LTLALVLLYYFLSIGLTFYFKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALATA   95 (349)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhhh
Confidence            33445599999999999999999999999999999999987776543332 121   12334444 46788889999999


Q ss_pred             HHHHHHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccccccccHHHHHHHHHHHHH
Q 013132          201 LGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIA  280 (449)
Q Consensus       201 ~~~~~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e~~f~~~G~l~~l~s~l~  280 (449)
                      .++.+.|+|++|++++++++.|++.++|+.+++.+|.-|++++.-.+..+++-+|+.+.++.+.+||..|+++.+++.++
T Consensus        96 ~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf~lv~~aS~~  175 (349)
T KOG1443|consen   96 LDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGFFLVLAASLL  175 (349)
T ss_pred             cccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehhHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhhcCC-----ChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchh---HHHHHHHHHHHHH
Q 013132          281 FTYRSIYSKKAMTGM-----DSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLF---KFLSDLFWIGMFY  352 (449)
Q Consensus       281 ~a~~~V~~kk~~~~~-----~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~---~~~~~l~~~gv~~  352 (449)
                      .+++..+.+..+++-     +|++..++..+.-.+.++|..+.+||+....  +...+...+..   .....+...|...
T Consensus       176 sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~--~s~~f~~~d~~~~~rv~g~i~l~g~la  253 (349)
T KOG1443|consen  176 SGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLIT--SSSIFRFQDTGLILRVIGLISLGGLLA  253 (349)
T ss_pred             hhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccch--hhhHHHhcCccHHHHHHHHHHHHHHHH
Confidence            999999999988753     5889999999999999999999999987532  11112222221   2223345667888


Q ss_pred             HHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhhhh
Q 013132          353 HLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSNIR  414 (449)
Q Consensus       353 ~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~~~  414 (449)
                      ++...+.|.++.+++.+|.|+++..|.+.+.++++++.+|.++. .+.|..+++.|+..|...
T Consensus       254 F~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~~~  316 (349)
T KOG1443|consen  254 FLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHRNE  316 (349)
T ss_pred             HHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhccC
Confidence            89999999999999999999999999999999999999999997 488999999999999443

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.95  E-value=6e-25  Score=223.06  Aligned_cols=289  Identities=10%  Similarity=0.061  Sum_probs=212.5

Q ss_pred             ccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHH-hCC-CCCCCCCHHHHHHHHH
Q 013132          117 SFGERFPALVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWT-VGL-PQRAPINKELLVILTP  194 (449)
Q Consensus       117 ~~~~~~~~l~i~~~~~~w~~~s~~~~i~nK~~l~~fp~P~~lt~~r~l~~~l~lli~~~-~~~-~~~~~~~~~~~~~~l~  194 (449)
                      +.|++..+.++++..+.  ..+.+++++.|..++..-.|..+.++|++++++++++... +++ +++++.++++|..+..
T Consensus         6 ~~~~~~~~~~~~~~~~q--~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l   83 (358)
T PLN00411          6 SLWRREAVFLTAMLATE--TSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGL   83 (358)
T ss_pred             hhhhhccchHHHHHHHH--HHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHH
Confidence            34444445555666555  5567778899999987544888999999999887765432 222 2223345677788888


Q ss_pred             HHHHHHHHHHHHHHhhcccchHHHHHHHhhHHHHHHHHHHHH------cCcccChhhHHHHHHHHhhhhhhccc-cc---
Q 013132          195 VAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFV------LGHQIPLSLWLSLAPVVIGVSMASLT-EL---  264 (449)
Q Consensus       195 ~gl~~~~~~~~~~~sL~~vsvs~a~iiks~~Pift~lls~l~------l~e~~s~~~~lsllliv~Gv~L~~~~-e~---  264 (449)
                      .|++.+....+.+.+++|++++.+.++.++.|++++++++++      ++||+++++++|+++.++|+.+.... +.   
T Consensus        84 ~g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~  163 (358)
T PLN00411         84 LGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVF  163 (358)
T ss_pred             HHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccc
Confidence            888775556678999999999999999999999999999999      69999999999999999999876531 10   


Q ss_pred             --------------------ccc-HHHHHHHHHHHHHHHHHHHHHHhhhcCCChH-HHHHHHHHHHHHHHHHHHHHhhch
Q 013132          265 --------------------SFN-WTGFISAMISNIAFTYRSIYSKKAMTGMDST-NVYAYTSIIALLFCIPPAVLIEGP  322 (449)
Q Consensus       265 --------------------~f~-~~G~l~~l~s~l~~a~~~V~~kk~~~~~~~~-~l~~~~s~~s~l~Llp~al~~e~~  322 (449)
                                          ..+ ..|..++++++++|+++++++|+..+++++. ...++++.++.+.+.+++...|..
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~  243 (358)
T PLN00411        164 VASSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKN  243 (358)
T ss_pred             cccccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccC
Confidence                                112 4599999999999999999999988887664 556677777777777766665542


Q ss_pred             hhhhhhHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHH
Q 013132          323 QLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDL  401 (449)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg  401 (449)
                      ....  |.   ...+. .. ..++..+++..+.....++++++++|.+.++..++.|++++++|++++||++++ +.+|+
T Consensus       244 ~~~~--~~---~~~~~-~~-~~i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~  316 (358)
T PLN00411        244 NPSV--WI---IHFDI-TL-ITIVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGG  316 (358)
T ss_pred             Cccc--ce---eccch-HH-HHHHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHH
Confidence            2111  10   00111 11 112223332222223344589999999999999999999999999999999998 68899


Q ss_pred             HHHHhhhhhhhhh
Q 013132          402 CADIHPEFCSNIR  414 (449)
Q Consensus       402 ~lil~Gv~ly~~~  414 (449)
                      ++++.|+++.++.
T Consensus       317 ~LIl~Gv~l~~~~  329 (358)
T PLN00411        317 ILITLGFYAVMWG  329 (358)
T ss_pred             HHHHHHHHHHHhh
Confidence            9999999998754

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.95  E-value=1.7e-25  Score=216.62  Aligned_cols=284  Identities=14%  Similarity=0.172  Sum_probs=243.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCCchHHHHH--HHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 013132          129 FFFFMWYFLNVIFNILNKKVYNYFPYPYFVSV--IHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHVMS  206 (449)
Q Consensus       129 ~~~~~w~~~s~~~~i~nK~~l~~fp~P~~lt~--~r~l~~~l~lli~~~~~~~~~~~~~~~~~~~~l~~gl~~~~~~~~~  206 (449)
                      ...+.|+..++.+.+.||++++.++||..+..  .|.+.+.+.+......|..+.++++++..|.++|+++++.+..+.+
T Consensus        15 ~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~i~t~   94 (314)
T KOG1444|consen   15 LSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGMLFTG   94 (314)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHHHHHc
Confidence            44566777799999999999999998877777  8999999998888888888888999999999999999999999999


Q ss_pred             HHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccccccccHHHHHHHHHHHHHHHHHHH
Q 013132          207 NVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYRSI  286 (449)
Q Consensus       207 ~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e~~f~~~G~l~~l~s~l~~a~~~V  286 (449)
                      ..+++|+++++++++|..+|+++++.+.+++|.+++...+.++..+.+|......+|.+++..|+.|+++.+++-+.+.+
T Consensus        95 ~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~~~~a~~~v  174 (314)
T KOG1444|consen   95 SKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANCLTTAAFVV  174 (314)
T ss_pred             cccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhhc--CCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013132          287 YSKKAMT--GMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQLATNTLE  364 (449)
Q Consensus       287 ~~kk~~~--~~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~l~  364 (449)
                      +.||..+  +.+.+.+++|.++.+...+.....+.|...-..    .....+....++..+.++|++.+..+++.+++.+
T Consensus       175 ~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~----~~~~~~~~~~~~~~~~lScv~gf~isy~s~~ct~  250 (314)
T KOG1444|consen  175 YVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALS----LNFDNWSDSSVLVVMLLSCVMGFGISYTSFLCTR  250 (314)
T ss_pred             HHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHH----hhcccccchhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999765  567789999999999988888877664322111    1111122234566788999999999999999999


Q ss_pred             ccChhHHHHHhhhhHHHHHHHHHHhhCccchhH-HHHHHHHHhhhhhhhhhhh
Q 013132          365 RVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTAS-FHDLCADIHPEFCSNIRFS  416 (449)
Q Consensus       365 ~isp~t~Si~~~lk~v~~il~sillfge~ls~~-~iGg~lil~Gv~ly~~~~~  416 (449)
                      ..|++|.++.+......+.+...+++|++.++. .+|..+-.+|-..|+....
T Consensus       251 ~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~  303 (314)
T KOG1444|consen  251 VNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATF  303 (314)
T ss_pred             hccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhh
Confidence            999999999995555555666666666788885 7899999999999987643

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.92  E-value=7.7e-23  Score=203.83  Aligned_cols=273  Identities=18%  Similarity=0.270  Sum_probs=213.8

Q ss_pred             HHHHHHHHHHHHHHhh---CCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 013132          136 FLNVIFNILNKKVYNY---FPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHVMSNVSFAT  212 (449)
Q Consensus       136 ~~s~~~~i~nK~~l~~---fp~P~~lt~~r~l~~~l~lli~~~~~~~~~~~~~~~~~~~~l~~gl~~~~~~~~~~~sL~~  212 (449)
                      ++...+.++.+++...   .++|+++++.|+++..+...+......  ..+.++..++..++.++++.+...++|.|++|
T Consensus        10 ~~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~   87 (303)
T PF08449_consen   10 GGCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFK--FPKSRKIPLKKYAILSFLFFLASVLSNAALKY   87 (303)
T ss_pred             HHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcc--ccCCCcChHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            3333444667777664   236999999999998887654443222  12224456788899999999999999999999


Q ss_pred             cchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccccc----ccc------HHHHHHHHHHHHHHH
Q 013132          213 VAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTEL----SFN------WTGFISAMISNIAFT  282 (449)
Q Consensus       213 vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e~----~f~------~~G~l~~l~s~l~~a  282 (449)
                      ++.++.+++|++.|+++++++.+++|+|++++++++++++++|+++....|.    +.+      ..|+++++++.++.+
T Consensus        88 i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a  167 (303)
T PF08449_consen   88 ISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDA  167 (303)
T ss_pred             CChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999876542    111      239999999999999


Q ss_pred             HHHHHHHhhhc--CCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHH
Q 013132          283 YRSIYSKKAMT--GMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQLAT  360 (449)
Q Consensus       283 ~~~V~~kk~~~--~~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~~~  360 (449)
                      +..++++|..+  +.++.+.++|.+.++.+.+++.....+..... ..+.. ..  ..+..+..++..+++.+..+...+
T Consensus       168 ~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~-~~~~f-~~--~~p~~~~~l~~~s~~~~~g~~~i~  243 (303)
T PF08449_consen  168 FTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFR-SAIRF-IS--AHPSVLLYLLLFSLTGALGQFFIF  243 (303)
T ss_pred             HHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhh-HHHHH-HH--HhHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999886  46789999999999999988887763211111 11111 11  112344455556666665555566


Q ss_pred             HHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhhhh
Q 013132          361 NTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSNIR  414 (449)
Q Consensus       361 ~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~~~  414 (449)
                      .++++.||++.++..++++++++++|+++||+++++ +++|.+++..|..+|+..
T Consensus       244 ~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~  298 (303)
T PF08449_consen  244 YLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYA  298 (303)
T ss_pred             HHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHh
Confidence            789999999999999999999999999999999998 688999999999999776

; GO: 0055085 transmembrane transport

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.92  E-value=2.9e-22  Score=198.88  Aligned_cols=266  Identities=12%  Similarity=0.074  Sum_probs=188.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 013132          125 LVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHV  204 (449)
Q Consensus       125 l~i~~~~~~w~~~s~~~~i~nK~~l~~fp~P~~lt~~r~l~~~l~lli~~~~~~~~~~~~~~~~~~~~l~~gl~~~~~~~  204 (449)
                      +.....+++|.. ++   ...|..++++| |..+.++|+.++.+++++..  +.++   .++++++.++..++.+++.+.
T Consensus         7 l~~l~a~~~Wg~-~~---~~~k~~~~~~~-P~~~~~~R~~~a~l~l~~~~--~~~~---~~~~~~~~~~~~~l~~~~~~~   76 (295)
T PRK11689          7 LIGLIAILLWST-MV---GLIRGVSESLG-PVGGAAMIYSVSGLLLLLTV--GFPR---LRQFPKRYLLAGGLLFVSYEI   76 (295)
T ss_pred             HHHHHHHHHHHH-HH---HHHHHHHccCC-hHHHHHHHHHHHHHHHHHHc--cccc---cccccHHHHHHHhHHHHHHHH
Confidence            334455566654 33   57899999998 99999999999988776542  1222   122234444555555556666


Q ss_pred             HHHHhhcc----cchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhcccccc-----------ccHH
Q 013132          205 MSNVSFAT----VAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELS-----------FNWT  269 (449)
Q Consensus       205 ~~~~sL~~----vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e~~-----------f~~~  269 (449)
                      +.+.+++|    ++++.+.++.++.|+++++++++++|||+++++++++++.+.|+++...++.+           .+..
T Consensus        77 ~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~  156 (295)
T PRK11689         77 CLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPL  156 (295)
T ss_pred             HHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChH
Confidence            67777654    57778889999999999999999999999999999999999999888654321           2356


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHHHHHHH
Q 013132          270 GFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIG  349 (449)
Q Consensus       270 G~l~~l~s~l~~a~~~V~~kk~~~~~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~g  349 (449)
                      |++++++++++|+.++++.||..++.++.....   ..+.+.+.+...+.+.+. ...++      ..+    ..+++.|
T Consensus       157 G~~~~l~aa~~~A~~~v~~k~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~-~~~~~------~~~----~~l~~~~  222 (295)
T PRK11689        157 SYGLAFIGAFIWAAYCNVTRKYARGKNGITLFF---ILTALALWIKYFLSPQPA-MVFSL------PAI----IKLLLAA  222 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhccCCCCchhHHH---HHHHHHHHHHHHHhcCcc-ccCCH------HHH----HHHHHHH
Confidence            999999999999999999999887788776532   223334444333322211 11111      111    1112222


Q ss_pred             HHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhhhh
Q 013132          350 MFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSNIR  414 (449)
Q Consensus       350 v~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~~~  414 (449)
                      +....-....+..+++++|.+.++..+++|+++++++++++||++++ +.+|+++++.|+++...+
T Consensus       223 ~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~  288 (295)
T PRK11689        223 AAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLA  288 (295)
T ss_pred             HHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhh
Confidence            22222223334589999999999999999999999999999999998 688999999998887554

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.91  E-value=4.6e-21  Score=189.99  Aligned_cols=269  Identities=14%  Similarity=0.145  Sum_probs=199.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHH-HHHHHH
Q 013132          127 TGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCH-ALGHVM  205 (449)
Q Consensus       127 i~~~~~~w~~~s~~~~i~nK~~l~~fp~P~~lt~~r~l~~~l~lli~~~~~~~~~~~~~~~~~~~~l~~gl~~-~~~~~~  205 (449)
                      +....++|...    .+..|..+++.+ |..++++|++++.+++++....+..+  ..++++++.....|++. .....+
T Consensus        13 ~~~~~~iWg~~----~~~~K~~~~~~~-p~~~~~~R~~~a~l~ll~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~   85 (292)
T PRK11272         13 LFALYIIWGST----YLVIRIGVESWP-PLMMAGVRFLIAGILLLAFLLLRGHP--LPTLRQWLNAALIGLLLLAVGNGM   85 (292)
T ss_pred             HHHHHHHHhhH----HHHHHHHhccCC-HHHHHHHHHHHHHHHHHHHHHHhCCC--CCcHHHHHHHHHHHHHHHHHHHHH
Confidence            33444555442    257898888887 99999999999988765544332222  22466788777888765 445677


Q ss_pred             HHHhh-cccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccc-cccccHHHHHHHHHHHHHHHH
Q 013132          206 SNVSF-ATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLT-ELSFNWTGFISAMISNIAFTY  283 (449)
Q Consensus       206 ~~~sL-~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~-e~~f~~~G~l~~l~s~l~~a~  283 (449)
                      .+.+. ++++++.+.++.++.|+++.+++.+ +|||++++++++++++++|+.+...+ +.+.+..|.+++++++++|+.
T Consensus        86 ~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a~~~~a~  164 (292)
T PRK11272         86 VTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIASASWAF  164 (292)
T ss_pred             HHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHHHHHHHH
Confidence            78888 9999999999999999999999985 69999999999999999999887643 334567899999999999999


Q ss_pred             HHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhH-HHHHHHHHHHHHHHHHHHHHHH
Q 013132          284 RSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFK-FLSDLFWIGMFYHLYNQLATNT  362 (449)
Q Consensus       284 ~~V~~kk~~~~~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~-~~~~l~~~gv~~~~~~~~~~~~  362 (449)
                      +.++.||..++ ++.....+....+.+++.+.....+.+.....+.      ..+.. .+..++.+++.+.++    +..
T Consensus       165 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~i~~l~i~~s~~~~~l~----~~~  233 (292)
T PRK11272        165 GSVWSSRLPLP-VGMMAGAAEMLAAGVVLLIASLLSGERLTALPTL------SGFLALGYLAVFGSIIAISAY----MYL  233 (292)
T ss_pred             HHHHHHhcCCC-cchHHHHHHHHHHHHHHHHHHHHcCCcccccCCH------HHHHHHHHHHHHHHHHHHHHH----HHH
Confidence            99999997543 4455667777888888888766443321110010      11111 111222222223233    347


Q ss_pred             hhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhhhh
Q 013132          363 LERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSNIR  414 (449)
Q Consensus       363 l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~~~  414 (449)
                      +++.++.+.++...++|+++++++++++||++++ +.+|+++++.|+++.+.+
T Consensus       234 ~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~  286 (292)
T PRK11272        234 LRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLG  286 (292)
T ss_pred             HhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence            8999999999999999999999999999999998 688999999999988665

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.90  E-value=1.9e-21  Score=188.57  Aligned_cols=248  Identities=14%  Similarity=0.131  Sum_probs=190.2

Q ss_pred             HHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHH-HHHHHHHHHHHhhcccchHHHHHH
Q 013132          143 ILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAF-CHALGHVMSNVSFATVAVSFTHTI  221 (449)
Q Consensus       143 i~nK~~l~~fp~P~~lt~~r~l~~~l~lli~~~~~~~~~~~~~~~~~~~~l~~gl-~~~~~~~~~~~sL~~vsvs~a~ii  221 (449)
                      +..|..++..+.|..+++.|++++.+++.+....+      .++++++..+..|. .+.....+.+.|++|++++.+.++
T Consensus         6 ~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ii   79 (260)
T TIGR00950         6 VVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAALL   79 (260)
T ss_pred             HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHH
Confidence            56899888655589999999998888776554433      13445555555554 466777889999999999999999


Q ss_pred             HhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccc-cccccHHHHHHHHHHHHHHHHHHHHHHhhhcCCCh--H
Q 013132          222 KALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLT-ELSFNWTGFISAMISNIAFTYRSIYSKKAMTGMDS--T  298 (449)
Q Consensus       222 ks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~-e~~f~~~G~l~~l~s~l~~a~~~V~~kk~~~~~~~--~  298 (449)
                      .+++|+++++++.+++|||++++++.++++++.|+.+.... +.+.+..|++++++++++|+.+.++.||..++.++  .
T Consensus        80 ~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~  159 (260)
T TIGR00950        80 LYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLVKKEGPELL  159 (260)
T ss_pred             HhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHH
Confidence            99999999999999999999999999999999999887543 33456789999999999999999999998877764  4


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHHHHHHHHHHH-HHHHHHHHHhhccChhHHHHHhhh
Q 013132          299 NVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYH-LYNQLATNTLERVAPLTHAVGNVL  377 (449)
Q Consensus       299 ~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~-~~~~~~~~~l~~isp~t~Si~~~l  377 (449)
                      ....+.+..+.++++|.....+.....  +.      .    .+..++..|++.. ......+..+++.++.+.++...+
T Consensus       160 ~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~------~----~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~  227 (260)
T TIGR00950       160 QFTGWVLLLGALLLLPFAWFLGPNPQA--LS------L----QWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILALA  227 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCc--ch------H----HHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHH
Confidence            455567788888888887654332211  11      1    1111222333221 222233458999999999999999


Q ss_pred             hHHHHHHHHHHhhCccchh-HHHHHHHHHhhh
Q 013132          378 KRVFVIGFSIVVFGNYFTA-SFHDLCADIHPE  408 (449)
Q Consensus       378 k~v~~il~sillfge~ls~-~~iGg~lil~Gv  408 (449)
                      +|+++++++++++||++++ +.+|.++++.|+
T Consensus       228 ~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       228 EPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            9999999999999999998 588888888875

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.90  E-value=1.3e-20  Score=187.02  Aligned_cols=249  Identities=16%  Similarity=0.149  Sum_probs=186.5

Q ss_pred             HHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHH
Q 013132          143 ILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIK  222 (449)
Q Consensus       143 i~nK~~l~~fp~P~~lt~~r~l~~~l~lli~~~~~~~~~~~~~~~~~~~~l~~gl~~~~~~~~~~~sL~~vsvs~a~iik  222 (449)
                      .+.|++++++| |..+.++|++++.+++++....+.   .+.++++++..+..|++......+.+.+++|++++.+.++.
T Consensus        29 ~~~K~~~~~~~-~~~~~~~R~~~a~l~l~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~  104 (293)
T PRK10532         29 SLAKSLFPLVG-APGVTALRLALGTLILIAIFKPWR---LRFAKEQRLPLLFYGVSLGGMNYLFYLSIQTVPLGIAVALE  104 (293)
T ss_pred             HHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHhHHh---ccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence            36899999988 999999999999887765543221   12356777888888887777778888999999999999999


Q ss_pred             hhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccc--c-ccccHHHHHHHHHHHHHHHHHHHHHHhhhcCCChHH
Q 013132          223 ALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLT--E-LSFNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTN  299 (449)
Q Consensus       223 s~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~--e-~~f~~~G~l~~l~s~l~~a~~~V~~kk~~~~~~~~~  299 (449)
                      .+.|+++++++.    |++..  ..++.+++.|+.+....  + .+.+..|.+++++++++|+.+.+..||..++.++..
T Consensus       105 ~t~Pi~~~ll~~----~~~~~--~~~~~i~~~Gv~li~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~~~~~  178 (293)
T PRK10532        105 FTGPLAVALFSS----RRPVD--FVWVVLAVLGLWFLLPLGQDVSHVDLTGAALALGAGACWAIYILSGQRAGAEHGPAT  178 (293)
T ss_pred             HHHHHHHHHHhc----CChHH--HHHHHHHHHHHheeeecCCCcccCChHHHHHHHHHHHHHHHHHHHHHHHhccCCchH
Confidence            999999998873    55544  44566778998776522  2 234678999999999999999999999987777766


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchh-HHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHhhhh
Q 013132          300 VYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLF-KFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLK  378 (449)
Q Consensus       300 l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~-~~~~~l~~~gv~~~~~~~~~~~~l~~isp~t~Si~~~lk  378 (449)
                      .. +...++.+++.|+....+....  .++.      .+. .++..++.+.+.+.+++    ..+++++|.+.|+..+++
T Consensus       179 ~~-~~~~~~~~~l~~~~~~~~~~~~--~~~~------~~~~~l~lgv~~t~~~~~l~~----~~~~~~~a~~as~~~~l~  245 (293)
T PRK10532        179 VA-IGSLIAALIFVPIGALQAGEAL--WHWS------ILPLGLAVAILSTALPYSLEM----IALTRLPTRTFGTLMSME  245 (293)
T ss_pred             HH-HHHHHHHHHHHHHHHHccCccc--CCHH------HHHHHHHHHHHHHHHHHHHHH----HHHHhcChhHHHHHHHhH
Confidence            54 5567777888887664332111  0110      010 11222222333333333    489999999999999999


Q ss_pred             HHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhhhh
Q 013132          379 RVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSNIR  414 (449)
Q Consensus       379 ~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~~~  414 (449)
                      |++++++|++++||++++ +.+|+++++.|+..+..+
T Consensus       246 Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~  282 (293)
T PRK10532        246 PALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLT  282 (293)
T ss_pred             HHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhc
Confidence            999999999999999998 689999999999999765

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.90  E-value=1.1e-20  Score=187.93  Aligned_cols=271  Identities=11%  Similarity=0.228  Sum_probs=189.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHH-HHH
Q 013132          126 VTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHAL-GHV  204 (449)
Q Consensus       126 ~i~~~~~~w~~~s~~~~i~nK~~l~~fp~P~~lt~~r~l~~~l~lli~~~~~~~~~~~~~~~~~~~~l~~gl~~~~-~~~  204 (449)
                      ......++|....    ...|..+++++ |..+.++|++++.+.+++...  .++   .+   ++..+..|++... ...
T Consensus         8 ~~l~~~~~Wg~~~----~~~k~~~~~~~-p~~~~~~R~~~a~~~l~~~~~--~~~---~~---~~~~~~~g~~~~~~~~~   74 (299)
T PRK11453          8 LALLVVVVWGLNF----VVIKVGLHNMP-PLMLAGLRFMLVAFPAIFFVA--RPK---VP---LNLLLGYGLTISFGQFA   74 (299)
T ss_pred             HHHHHHHHHhhhH----HHHHHHHhcCC-HHHHHHHHHHHHHHHHHHHhc--CCC---Cc---hHHHHHHHHHHHHHHHH
Confidence            3445556665533    46798888888 999999999987765544332  111   11   2344455554333 334


Q ss_pred             HHHHhhcc-cchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhcccc---ccccHHHHHHHHHHHHH
Q 013132          205 MSNVSFAT-VAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTE---LSFNWTGFISAMISNIA  280 (449)
Q Consensus       205 ~~~~sL~~-vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e---~~f~~~G~l~~l~s~l~  280 (449)
                      +.+.+++| ++++.+.++.++.|+++.+++++++|||++.+++++++++++|+.+....+   .+.++.|.+++++++++
T Consensus        75 ~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l~l~aal~  154 (299)
T PRK11453         75 FLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAFS  154 (299)
T ss_pred             HHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHHHHHHHHHH
Confidence            56678887 688999999999999999999999999999999999999999998876432   22356799999999999


Q ss_pred             HHHHHHHHHhhhcCCCh---HHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHHHHHHHHHHHHHH-
Q 013132          281 FTYRSIYSKKAMTGMDS---TNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYN-  356 (449)
Q Consensus       281 ~a~~~V~~kk~~~~~~~---~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~-  356 (449)
                      |+.+.+++||..++.+.   .....+....+.+.+...+...|++......+    ...++ ..+..+++.|++..... 
T Consensus       155 ~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~l~~l~i~~t~~~~  229 (299)
T PRK11453        155 WACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSL----VTIDM-TTILSLMYLAFVATIVGY  229 (299)
T ss_pred             HHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhh----ccCCH-HHHHHHHHHHHHHHHHHH
Confidence            99999999997654433   34445555555554444444445432111111    11111 12223333343332222 


Q ss_pred             HHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhhhh
Q 013132          357 QLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSNIR  414 (449)
Q Consensus       357 ~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~~~  414 (449)
                      ...+..+++.+|.+.+....++|+++++++++++||++++ +.+|+++++.|+++..+.
T Consensus       230 ~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~  288 (299)
T PRK11453        230 GIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFG  288 (299)
T ss_pred             HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcc
Confidence            2223478999999999999999999999999999999998 689999999999887554

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.88  E-value=2.7e-23  Score=195.72  Aligned_cols=285  Identities=17%  Similarity=0.257  Sum_probs=239.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhh----CCchHHHHHHHHHHHHHHHHHH-HHh----CCCC--CCCCCHHHHHHHH
Q 013132          125 LVTGFFFFMWYFLNVIFNILNKKVYNY----FPYPYFVSVIHLLVGVVYCLVS-WTV----GLPQ--RAPINKELLVILT  193 (449)
Q Consensus       125 l~i~~~~~~w~~~s~~~~i~nK~~l~~----fp~P~~lt~~r~l~~~l~lli~-~~~----~~~~--~~~~~~~~~~~~l  193 (449)
                      .++-.....+|..++++.+.||++++.    ..-|.+.++.|.++...+++.. +..    ++..  ..+++.+..+.++
T Consensus        27 ~~v~~~vs~ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vl  106 (347)
T KOG1442|consen   27 KQVDSAVSLYWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVL  106 (347)
T ss_pred             hchhhhccceeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhc
Confidence            344566677788899999999999984    5679999999999988776543 221    1111  2236677889999


Q ss_pred             HHHHHHHHHHHHHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhcccc---ccccHHH
Q 013132          194 PVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTE---LSFNWTG  270 (449)
Q Consensus       194 ~~gl~~~~~~~~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e---~~f~~~G  270 (449)
                      |+++.+...+.+.|..++|++++++++-++++-+|+++++++++|++-+.....+-+++++|-.+-+..|   ..+.+.|
T Consensus       107 plsvVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~~ls~~G  186 (347)
T KOG1442|consen  107 PLSVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGSTGTLSWIG  186 (347)
T ss_pred             chhheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccccCccchhh
Confidence            9999999999999999999999999999999999999999999999999999999999999999988887   4568999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCCC--hHHHHHHHHHHHHHHHHHHHHHh-hchhhhhhhHHHHHhhhchhHHHHHHHH
Q 013132          271 FISAMISNIAFTYRSIYSKKAMTGMD--STNVYAYTSIIALLFCIPPAVLI-EGPQLMQYGFKAAIAKVGLFKFLSDLFW  347 (449)
Q Consensus       271 ~l~~l~s~l~~a~~~V~~kk~~~~~~--~~~l~~~~s~~s~l~Llp~al~~-e~~~~~~~~~~~~~~~~~~~~~~~~l~~  347 (449)
                      .++.+.+.++-|+..++.||.+...+  -+.+.+|+++.+.++.+|..++. |-..++.  +.    +.+...++..+.+
T Consensus       187 vifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~--~~----~l~a~~Fw~~mtL  260 (347)
T KOG1442|consen  187 VIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVG--FP----HLPAIKFWILMTL  260 (347)
T ss_pred             hHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcC--cc----cchHHHHHHHHHH
Confidence            99999999999999999999877654  37999999999999999988765 3222221  11    1222257788899


Q ss_pred             HHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchhH-HHHHHHHHhhhhhhhhhh
Q 013132          348 IGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTAS-FHDLCADIHPEFCSNIRF  415 (449)
Q Consensus       348 ~gv~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~~-~iGg~lil~Gv~ly~~~~  415 (449)
                      +|+++|.+|+.+.+-++-+||+|+.+-++.|.+.-.++++.+++|.-+.. +.+-.+++.|-..|.+..
T Consensus       261 sglfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk  329 (347)
T KOG1442|consen  261 SGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVK  329 (347)
T ss_pred             HHHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHH
Confidence            99999999999999999999999999999999999999999999999975 668889999999997653

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.87  E-value=2.4e-19  Score=178.14  Aligned_cols=265  Identities=13%  Similarity=0.106  Sum_probs=177.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCC-CC--CCC-CHHHHHHHHHHHHHHHHHHH
Q 013132          129 FFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLP-QR--API-NKELLVILTPVAFCHALGHV  204 (449)
Q Consensus       129 ~~~~~w~~~s~~~~i~nK~~l~~fp~P~~lt~~r~l~~~l~lli~~~~~~~-~~--~~~-~~~~~~~~l~~gl~~~~~~~  204 (449)
                      ...++|....    ++.|.. .+.+ |..+.++|++++.+++++.+..+.+ +.  .+. +++.+...+..++..+.++.
T Consensus        15 ~a~~~wg~~~----~~~k~~-~~~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (296)
T PRK15430         15 AAYFIWGIAP----AYFKLI-YYVP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVLIGGNWL   88 (296)
T ss_pred             HHHHHHHHHH----HHHHHh-cCCC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHHHHHHHHH
Confidence            3444554432    345765 5677 9999999999998766544332211 10  001 23344434444556667789


Q ss_pred             HHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccccccccHHHHHHHHHHHHHHHHH
Q 013132          205 MSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYR  284 (449)
Q Consensus       205 ~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e~~f~~~G~l~~l~s~l~~a~~  284 (449)
                      +.++|+++++++.+.++..+.|+++++++++++|||+++++++++++++.|+++....+.+..    .++++++++|++|
T Consensus        89 ~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~~----~~~l~aa~~~a~~  164 (296)
T PRK15430         89 LFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSLP----IIALGLAFSFAFY  164 (296)
T ss_pred             HHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCcc----HHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999998764433222    4577889999999


Q ss_pred             HHHHHhhhcCC--ChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHH
Q 013132          285 SIYSKKAMTGM--DSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQLATNT  362 (449)
Q Consensus       285 ~V~~kk~~~~~--~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~  362 (449)
                      .++.|+..++.  +......|..+.+.+.+++..   +.+.. ...      ..++ .....+...|+....-+.+.+..
T Consensus       165 ~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~------~~~~-~~~~~~~~~g~~t~i~~~~~~~a  233 (296)
T PRK15430        165 GLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAIA---DSSTS-HMG------QNPM-SLNLLLIAAGIVTTVPLLCFTAA  233 (296)
T ss_pred             HHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHc---cCCcc-ccc------CCcH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999975322  223333444444444332221   11110 000      0011 01111222222222223334458


Q ss_pred             hhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhhhh
Q 013132          363 LERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSNIR  414 (449)
Q Consensus       363 l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~~~  414 (449)
                      +++.+|.+.|...+++|+++++++++++||++++ +.+|+++++.|+.+....
T Consensus       234 ~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~  286 (296)
T PRK15430        234 ATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMD  286 (296)
T ss_pred             HhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999998 588988887777666544

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.87  E-value=9.8e-20  Score=182.03  Aligned_cols=269  Identities=12%  Similarity=0.117  Sum_probs=199.4

Q ss_pred             HHHHHHHHHHhh-CCchHHHHHHHHHHHHHHHHHH--HHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccchH
Q 013132          140 IFNILNKKVYNY-FPYPYFVSVIHLLVGVVYCLVS--WTVGLPQRAPINKELLVILTPVAFCHALGHVMSNVSFATVAVS  216 (449)
Q Consensus       140 ~~~i~nK~~l~~-fp~P~~lt~~r~l~~~l~lli~--~~~~~~~~~~~~~~~~~~~l~~gl~~~~~~~~~~~sL~~vsvs  216 (449)
                      +.+..+..+-+. ...|.+-+++-.+.-.++....  +..+.++..+.-++.|+..+.+|++-..++++.+.|++|++++
T Consensus        27 ~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~~v~a~~yTsvt  106 (334)
T PF06027_consen   27 GTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYLVVLAYQYTSVT  106 (334)
T ss_pred             hHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHHHHHHhhcccHh
Confidence            334455554443 4567766666554433322211  2222212222223455666778999999999999999999999


Q ss_pred             HHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccccc---------cccHHHHHHHHHHHHHHHHHHHH
Q 013132          217 FTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTEL---------SFNWTGFISAMISNIAFTYRSIY  287 (449)
Q Consensus       217 ~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e~---------~f~~~G~l~~l~s~l~~a~~~V~  287 (449)
                      .++++.++.-+|+++++++++|+|+++.+++|+++.++|+++....|.         +....|.++++++++.||+++++
T Consensus       107 S~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~~nV~  186 (334)
T PF06027_consen  107 SVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYAVSNVL  186 (334)
T ss_pred             HHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999998865542         12478999999999999999999


Q ss_pred             HHhhhcCCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 013132          288 SKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQLATNTLERVA  367 (449)
Q Consensus       288 ~kk~~~~~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~l~~is  367 (449)
                      .++..++.+..+...+..+++.++..+....+|...+....|.       + .....++..+++-+......-..++..|
T Consensus       187 ~E~~v~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~-------~-~~~~~~v~~~~~lf~~y~l~p~~l~~ss  258 (334)
T PF06027_consen  187 EEKLVKKAPRVEFLGMLGLFGFIISGIQLAILERSGIESIHWT-------S-QVIGLLVGYALCLFLFYSLVPIVLRMSS  258 (334)
T ss_pred             HHHhcccCCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCC-------h-hhHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence            9999999999999999999999999888877777655332221       1 1111222222222222222233688999


Q ss_pred             hhHHHHHhhhhHHHHHHHHHHhhCccchhH-HHHHHHHHhhhhhhhhhhh
Q 013132          368 PLTHAVGNVLKRVFVIGFSIVVFGNYFTAS-FHDLCADIHPEFCSNIRFS  416 (449)
Q Consensus       368 p~t~Si~~~lk~v~~il~sillfge~ls~~-~iGg~lil~Gv~ly~~~~~  416 (449)
                      |+...+........++++++++||+++++. .+|.+++++|+++|+...+
T Consensus       259 At~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~  308 (334)
T PF06027_consen  259 ATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAES  308 (334)
T ss_pred             cceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCC
Confidence            998888887889999999999999999985 8899999999999987643

Some of the sequences in this family are annotated as putative membrane proteins.

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.83  E-value=2.8e-19  Score=164.19  Aligned_cols=256  Identities=15%  Similarity=0.172  Sum_probs=213.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhh--CCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Q 013132          132 FMWYFLNVIFNILNKKVYNY--FPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHVMSNVS  209 (449)
Q Consensus       132 ~~w~~~s~~~~i~nK~~l~~--fp~P~~lt~~r~l~~~l~lli~~~~~~~~~~~~~~~~~~~~l~~gl~~~~~~~~~~~s  209 (449)
                      ..|.+.++.+++.||++++.  |.....+.+.|-+++.+.+.+....+..+-   +..+.|.++|.+++.+..++.+..+
T Consensus        12 lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~f---R~t~aK~WfpiSfLLv~MIyt~SKs   88 (309)
T COG5070          12 LSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEF---RLTKAKKWFPISFLLVVMIYTSSKS   88 (309)
T ss_pred             HHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhhe---ehhhhhhhcCHHHHHHHHHHhcccc
Confidence            34556699999999999985  666678888999998887777666554432   2446777889999988888889999


Q ss_pred             hcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccccc--------cccHHHHHHHHHHHHHH
Q 013132          210 FATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTEL--------SFNWTGFISAMISNIAF  281 (449)
Q Consensus       210 L~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e~--------~f~~~G~l~~l~s~l~~  281 (449)
                      ++|.+++.+++.|.++.+.++..+.+++|.|++-....+.++++..-+.+.++|.        .+| .|++|+...++..
T Consensus        89 LqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN-~GY~Wm~~Nclss  167 (309)
T COG5070          89 LQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILN-PGYLWMFTNCLSS  167 (309)
T ss_pred             eeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccC-CceEEEehhhHhH
Confidence            9999999999999999999999999999999999999999999999999888876        344 6999999999999


Q ss_pred             HHHHHHHHhhhc--CCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHHHHHHHHHHHHHHHHH
Q 013132          282 TYRSIYSKKAMT--GMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQLA  359 (449)
Q Consensus       282 a~~~V~~kk~~~--~~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~~  359 (449)
                      +.+....||..+  +....+.++|.++++..+++.+.+++|.....  +..+.+    ....+..++.+|++.+...+++
T Consensus       168 aafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~--n~annl----~~d~l~am~ISgl~svgiSy~s  241 (309)
T COG5070         168 AAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPG--NLANNL----SVDSLMAMFISGLCSVGISYCS  241 (309)
T ss_pred             HHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcc--hhhcCC----ChHHHHHHHHHHHHHhhhhhcc
Confidence            999988888654  45678899999999999999999888754321  111101    1123456788999999999999


Q ss_pred             HHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchhH
Q 013132          360 TNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTAS  397 (449)
Q Consensus       360 ~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~~  397 (449)
                      -|+++-+|..++|+.+.+++....+.|.++||++.+.+
T Consensus       242 aWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~  279 (309)
T COG5070         242 AWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFL  279 (309)
T ss_pred             ceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHH
Confidence            99999999999999999999999999999999999975

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.82  E-value=6.2e-18  Score=166.70  Aligned_cols=257  Identities=15%  Similarity=0.166  Sum_probs=173.0

Q ss_pred             HHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhC--CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccchHH
Q 013132          140 IFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVG--LPQRAPINKELLVILTPVAFCHALGHVMSNVSFATVAVSF  217 (449)
Q Consensus       140 ~~~i~nK~~l~~fp~P~~lt~~r~l~~~l~lli~~~~~--~~~~~~~~~~~~~~~l~~gl~~~~~~~~~~~sL~~vsvs~  217 (449)
                      ..++.+|+..++-+ +  ....+...+.+.+.+....+  .+..++.+++++...+..++.....+.+.+.++++.+++.
T Consensus        15 ~~~~~~k~~~~~~~-~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~   91 (281)
T TIGR03340        15 GWNLMAKSHADKEP-D--FLWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGLAQAYHHADVGL   91 (281)
T ss_pred             HHHHHHhhcCCchh-H--HHHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhcCChhh
Confidence            34467886666522 3  23555555555554433222  2222233455566666666777788889999999999999


Q ss_pred             HHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccccc-cccHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 013132          218 THTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTEL-SFNWTGFISAMISNIAFTYRSIYSKKAMTGMD  296 (449)
Q Consensus       218 a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e~-~f~~~G~l~~l~s~l~~a~~~V~~kk~~~~~~  296 (449)
                      +..+..++|+++++++++++||++++++++|+.++++|+.+....+. +.+..|+.++++++++|+.+.++.|+..++.+
T Consensus        92 ~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~  171 (281)
T TIGR03340        92 VYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAALGTAIYSLSDKAAALGVP  171 (281)
T ss_pred             hhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhhhhccccccchh
Confidence            99999999999999999999999999999999999999988765432 34567888999999999999999998755554


Q ss_pred             hHH-HHHHHHHHHHHHH-HHHHHHh---hchhhhhhhHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhHH
Q 013132          297 STN-VYAYTSIIALLFC-IPPAVLI---EGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQLATNTLERVAPLTH  371 (449)
Q Consensus       297 ~~~-l~~~~s~~s~l~L-lp~al~~---e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~l~~isp~t~  371 (449)
                      +.. ...+. ..+.++. .|+....   +.......       ..   ..+..+...++....-+...+..+++.++.+.
T Consensus       172 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~---~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~  240 (281)
T TIGR03340       172 AFYSALGYL-GIGFLAMGWPFLLLYLKRHGRSMFPY-------AR---QILPSATLGGLMIGGAYALVLWAMTRLPVATV  240 (281)
T ss_pred             cccccHHHH-HHHHHHHHHHHHHHHHHHhccchhhh-------HH---HHHHHHHHHHHHHHHHHHHHHHHHhhCCceEE
Confidence            422 11121 1222222 2332221   11110000       00   11111122222222223333458899999999


Q ss_pred             HHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhh
Q 013132          372 AVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFC  410 (449)
Q Consensus       372 Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~l  410 (449)
                      +...++.|++++++|++++||+++. +.+|+++++.|+++
T Consensus       241 ~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       241 VALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             EeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            9999999999999999999999998 68899999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.78  E-value=9.7e-16  Score=149.64  Aligned_cols=258  Identities=16%  Similarity=0.176  Sum_probs=179.0

Q ss_pred             HHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHH
Q 013132          143 ILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIK  222 (449)
Q Consensus       143 i~nK~~l~~fp~P~~lt~~r~l~~~l~lli~~~~~~~~~~~~~~~~~~~~l~~gl~~~~~~~~~~~sL~~vsvs~a~iik  222 (449)
                      ...|...+....+......|++.+.+..+.....+...+.+..++.++..+..++.......+.+.++++++++.++++.
T Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  103 (292)
T COG0697          24 IALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALPFLLLFLALKYTSASVASLII  103 (292)
T ss_pred             HHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHH
Confidence            44555555423245555669888877643333322111111122234555666666777788899999999999999999


Q ss_pred             hhHHHHHHHHHH-HHcCcccChhhHHHHHHHHhhhhhhcccccccc---HHHHHHHHHHHHHHHHHHHHHHhhhcCCChH
Q 013132          223 ALEPFFNAAASQ-FVLGHQIPLSLWLSLAPVVIGVSMASLTELSFN---WTGFISAMISNIAFTYRSIYSKKAMTGMDST  298 (449)
Q Consensus       223 s~~Pift~lls~-l~l~e~~s~~~~lsllliv~Gv~L~~~~e~~f~---~~G~l~~l~s~l~~a~~~V~~kk~~~~~~~~  298 (449)
                      ++.|+++.+++. ++++||++++++.+++.++.|+.++...+...+   ..|..++++++++++++.++.|+.. +.++.
T Consensus       104 ~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l~a~~~~a~~~~~~~~~~-~~~~~  182 (292)
T COG0697         104 GLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAAALLWALYTALVKRLS-RLGPV  182 (292)
T ss_pred             HHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCChH
Confidence            999999999997 777999999999999999999999987765433   5899999999999999999999987 66665


Q ss_pred             HHHH-HHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHHHHHHHHHHH-HHHHHHHHHhhccChhHHHHHhh
Q 013132          299 NVYA-YTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYH-LYNQLATNTLERVAPLTHAVGNV  376 (449)
Q Consensus       299 ~l~~-~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~-~~~~~~~~~l~~isp~t~Si~~~  376 (449)
                      .... +..........+... .+.+  ....+.          .+..+...|+... ......+..+++.++...+....
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~----------~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~  249 (292)
T COG0697         183 TLALLLQLLLALLLLLLFFL-SGFG--APILSR----------AWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSL  249 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHh-cccc--ccCCHH----------HHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHH
Confidence            5554 333322222222221 1111  011110          1111222222222 12233345789999999999999


Q ss_pred             hhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhhhh
Q 013132          377 LKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSNIR  414 (449)
Q Consensus       377 lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~~~  414 (449)
                      ..++.+++.+++++||+++. +.+|+++++.|+.+.+.+
T Consensus       250 ~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         250 LEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            99999999999999999997 688999999999999776

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.74  E-value=2.3e-17  Score=152.65  Aligned_cols=268  Identities=14%  Similarity=0.149  Sum_probs=205.6

Q ss_pred             HHHHHHHHHHHHHHh-----------hCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 013132          136 FLNVIFNILNKKVYN-----------YFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHV  204 (449)
Q Consensus       136 ~~s~~~~i~nK~~l~-----------~fp~P~~lt~~r~l~~~l~lli~~~~~~~~~~~~~~~~~~~~l~~gl~~~~~~~  204 (449)
                      .+.+.+.+..+++..           .|.|...+.++|+.+..++.-+....+.  ..+.|+..-+....+++-+...++
T Consensus        23 vCYF~yGI~QEkitrGkYg~~g~~~E~FTfalaLVf~qC~~N~vfAkvl~~ir~--~~~~D~t~~~~YaAcs~sYLlAMV  100 (337)
T KOG1580|consen   23 VCYFVYGIQQEKITRGKYGLPGESIEKFTFALALVFFQCTANTVFAKVLFLIRK--KTEIDNTPTKMYAACSASYLLAMV  100 (337)
T ss_pred             heehhhhhHHHHhhccccCCCCcchheehHHHHHHHHHHHHHHHHHHhheeecc--cccccCCcchHHHHHHHHHHHHHH
Confidence            334444556665544           2778889999999988887644333222  223344445667788888888899


Q ss_pred             HHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccccc-------cccHHHHHHHHHH
Q 013132          205 MSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTEL-------SFNWTGFISAMIS  277 (449)
Q Consensus       205 ~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e~-------~f~~~G~l~~l~s  277 (449)
                      .+|.+++|++-++..+-|++.|+-+.+++.++.+++.+|++++.+++++.|+++..+.|.       ....+|-++.++|
T Consensus       101 ssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lS  180 (337)
T KOG1580|consen  101 SSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILS  180 (337)
T ss_pred             hccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999876542       1224788999999


Q ss_pred             HHHHHHHHHHHHhhhcC--CChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHHHHHHHHHHHHH
Q 013132          278 NIAFTYRSIYSKKAMTG--MDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLY  355 (449)
Q Consensus       278 ~l~~a~~~V~~kk~~~~--~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~  355 (449)
                      .-..++....+.+....  -+...++.++++.+.+.+-.-.++ .|.. ++  +.. +.+. .+..++.+...+++..+-
T Consensus       181 L~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lf-TGEl-we--F~y-F~~R-hP~~~~~l~l~ai~s~LG  254 (337)
T KOG1580|consen  181 LAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLF-TGEL-WE--FFY-FVQR-HPYVFWDLTLLAIASCLG  254 (337)
T ss_pred             HHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhhee-hhhH-HH--HHH-HHHh-ccHHHHHHHHHHHHHHhh
Confidence            99999988888776543  355788889999998877655443 3322 12  111 1111 124556677778888888


Q ss_pred             HHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhh
Q 013132          356 NQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCS  411 (449)
Q Consensus       356 ~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly  411 (449)
                      ++.-|..+...||++.|+..+-++.++++.|+++|++++++ |++|..++..|...=
T Consensus       255 Q~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D  311 (337)
T KOG1580|consen  255 QWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTAD  311 (337)
T ss_pred             hHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhH
Confidence            88888999999999999999999999999999999999998 788988888776654

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.74  E-value=1.7e-16  Score=149.76  Aligned_cols=286  Identities=16%  Similarity=0.175  Sum_probs=216.1

Q ss_pred             cccchhHHHHHHHHHHHHHHHHHHHHHHHHhh--C-CchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Q 013132          120 ERFPALVTGFFFFMWYFLNVIFNILNKKVYNY--F-PYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVA  196 (449)
Q Consensus       120 ~~~~~l~i~~~~~~w~~~s~~~~i~nK~~l~~--f-p~P~~lt~~r~l~~~l~lli~~~~~~~~~~~~~~~~~~~~l~~g  196 (449)
                      +++++.++.+.+...++....+....+++++.  | |+.|.+|++|+++-..+-++-......++..+   -|+....++
T Consensus        37 ~kpkw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~~~~k~r~i---P~rtY~~la  113 (367)
T KOG1582|consen   37 DKPKWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQLIQTKRRVI---PWRTYVILA  113 (367)
T ss_pred             cCchhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEeecccceec---chhHhhhhH
Confidence            34456677777777767777777888888875  4 48899999999886554433222122222222   377888888


Q ss_pred             HHHHHHHHHHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhcccc----ccccHHHHH
Q 013132          197 FCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTE----LSFNWTGFI  272 (449)
Q Consensus       197 l~~~~~~~~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e----~~f~~~G~l  272 (449)
                      .+..+.+.+++-|+.|.+-+...+.|++.-+-+.+.+.++-|+|.++..+.+..+...|+++.+..|    .+||..|++
T Consensus       114 ~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~Gv~  193 (367)
T KOG1582|consen  114 FLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFNLIGVM  193 (367)
T ss_pred             hhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCcceeeHH
Confidence            8888889999999999999999999999999999999999999999999999999999999987665    478999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcC--CChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHHHHHHHH
Q 013132          273 SAMISNIAFTYRSIYSKKAMTG--MDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGM  350 (449)
Q Consensus       273 ~~l~s~l~~a~~~V~~kk~~~~--~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv  350 (449)
                      +.-.+.++.|+-.-.+.|.++.  -+..++.+|...+|.+.++...... +.-..+  |.. ..+.++. .+...++.++
T Consensus       194 mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlT-ge~f~a--~~f-caehp~~-tyGy~~~~s~  268 (367)
T KOG1582|consen  194 MISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLT-GELFSA--WTF-CAEHPVR-TYGYAFLFSL  268 (367)
T ss_pred             HHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhc-ccchhh--hHH-HHhCcHh-HHHHHHHHHH
Confidence            9999999999988888888764  3457888899999998887766654 221211  211 2233332 2222233333


Q ss_pred             HHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchhH-HHHHHHHHhhhhhhhh
Q 013132          351 FYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTAS-FHDLCADIHPEFCSNI  413 (449)
Q Consensus       351 ~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~~-~iGg~lil~Gv~ly~~  413 (449)
                      ..|+-.......++.-++.+....++.++.+++++|.++|..|+|-| ..++.+++.|+++--.
T Consensus       269 ~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~y  332 (367)
T KOG1582|consen  269 AGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMY  332 (367)
T ss_pred             HhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcc
Confidence            33333333334688889999999999999999999999999999987 7899999999998643

>TIGR00688 rarD rarD protein

Probab=99.74  E-value=2.8e-15  Score=145.59  Aligned_cols=238  Identities=12%  Similarity=0.053  Sum_probs=156.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHH-HhCCCC----C-CCCCH-HHHHHHHHHHHHH
Q 013132          127 TGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSW-TVGLPQ----R-APINK-ELLVILTPVAFCH  199 (449)
Q Consensus       127 i~~~~~~w~~~s~~~~i~nK~~l~~fp~P~~lt~~r~l~~~l~lli~~-~~~~~~----~-~~~~~-~~~~~~l~~gl~~  199 (449)
                      .....++|....    ++.|. +.+.+ |..+.++|++++.+++++.. ..++++    + ++.++ +.+......|++.
T Consensus         7 ~i~a~~~wg~~~----~~~k~-~~~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   80 (256)
T TIGR00688         7 SLLASFLFGYMY----YYSKL-LKPLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLI   80 (256)
T ss_pred             HHHHHHHHHHHH----HHHHH-hccCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHH
Confidence            334445565433    46787 45677 99999999999987765432 222211    0 11122 2344566777777


Q ss_pred             HHHHHHHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccccccccHHHHHHHHHHHH
Q 013132          200 ALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNI  279 (449)
Q Consensus       200 ~~~~~~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e~~f~~~G~l~~l~s~l  279 (449)
                      .....+.++|+++++++.+.++..+.|+|+++++.+++|||++++++++++++++|+++...++.+.+    .+++++++
T Consensus        81 ~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~----~~~l~aa~  156 (256)
T TIGR00688        81 GFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLP----WEALVLAF  156 (256)
T ss_pred             HHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCch----HHHHHHHH
Confidence            77889999999999999999999999999999999999999999999999999999987754333222    35788999


Q ss_pred             HHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHH---h-hchhhhhhhHHHHHhhhchhHHHHHHHHHHHHHHHH
Q 013132          280 AFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVL---I-EGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLY  355 (449)
Q Consensus       280 ~~a~~~V~~kk~~~~~~~~~l~~~~s~~s~l~Llp~al~---~-e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~  355 (449)
                      +|+.|.+..|+..+ .+..+...     +.+.+.|....   . +.+......     ....|    ..++..|++...-
T Consensus       157 ~~a~~~i~~~~~~~-~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~----~~l~~~g~~t~i~  221 (256)
T TIGR00688       157 SFTAYGLIRKALKN-TDLAGFCL-----ETLSLMPVAIYYLLQTDFATVQQTN-----PFPIW----LLLVLAGLITGTP  221 (256)
T ss_pred             HHHHHHHHHhhcCC-CCcchHHH-----HHHHHHHHHHHHHHHhccCcccccC-----chhHH----HHHHHHHHHHHHH
Confidence            99999999998753 23322221     12222333221   1 111000000     00011    1122222222222


Q ss_pred             HHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHh
Q 013132          356 NQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVV  389 (449)
Q Consensus       356 ~~~~~~~l~~isp~t~Si~~~lk~v~~il~sill  389 (449)
                      ..+.+..+++.++.+.+...+++|+++.++++++
T Consensus       222 ~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       222 LLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             HHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            3333458999999999999999999999999764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.73  E-value=1.3e-15  Score=146.44  Aligned_cols=282  Identities=14%  Similarity=0.111  Sum_probs=211.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHh--------hCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Q 013132          125 LVTGFFFFMWYFLNVIFNILNKKVYN--------YFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVA  196 (449)
Q Consensus       125 l~i~~~~~~w~~~s~~~~i~nK~~l~--------~fp~P~~lt~~r~l~~~l~lli~~~~~~~~~~~~~~~~~~~~l~~g  196 (449)
                      ..+.+.+..-|..-....++.+.+.+        .|..|.++.+.|-+++.+.-..... ..++. ....+.|.....++
T Consensus        13 ~~L~~c~~GI~~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~-~~k~~-~~~~apl~~y~~is   90 (327)
T KOG1581|consen   13 ILLVFCFSGIYATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLK-WWKKE-LSGVAPLYKYSLIS   90 (327)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHh-ccccc-CCCCCchhHHhHHH
Confidence            33444444444545555566666554        2667999999999888776533322 22222 22345677788889


Q ss_pred             HHHHHHHHHHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccccc---------ccc
Q 013132          197 FCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTEL---------SFN  267 (449)
Q Consensus       197 l~~~~~~~~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e~---------~f~  267 (449)
                      +.+....++++.||+|++-++..+-|++.-+-+++++.++.++|++..+++...++.+|+.+....+.         ...
T Consensus        91 ~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns  170 (327)
T KOG1581|consen   91 FTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENS  170 (327)
T ss_pred             HHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999988754321         245


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhc--CCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHHH
Q 013132          268 WTGFISAMISNIAFTYRSIYSKKAMT--GMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDL  345 (449)
Q Consensus       268 ~~G~l~~l~s~l~~a~~~V~~kk~~~--~~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l  345 (449)
                      +.|+.++....+..++.|..++++.+  ++++++++++.++++++......+ ..+.....-.+   ..  -.++++.++
T Consensus       171 ~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li-~qg~~~~av~F---~~--~hp~~~~Di  244 (327)
T KOG1581|consen  171 PIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLI-LQGHLLPAVSF---IK--EHPDVAFDI  244 (327)
T ss_pred             hHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhh-cCCCCchHHHH---HH--cChhHHHHH
Confidence            89999999999999999999999887  468999999999999887765522 22221111111   11  123566667


Q ss_pred             HHHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchhHHHHHHHHHhhhhhhhhh
Q 013132          346 FWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTASFHDLCADIHPEFCSNIR  414 (449)
Q Consensus       346 ~~~gv~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~~~iGg~lil~Gv~ly~~~  414 (449)
                      ++.++++..-+..-|..+++-||++..+.++.+.++++.+|.++||++++.++.++.++++|...++..
T Consensus       245 ~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~  313 (327)
T KOG1581|consen  245 LLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEIL  313 (327)
T ss_pred             HHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHH
Confidence            776666665555567789999999999999999999999999999999999666556666666666544

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.69  E-value=9.1e-16  Score=137.02  Aligned_cols=144  Identities=26%  Similarity=0.376  Sum_probs=121.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcC-------CChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhc-hhHH
Q 013132          270 GFISAMISNIAFTYRSIYSKKAMTG-------MDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVG-LFKF  341 (449)
Q Consensus       270 G~l~~l~s~l~~a~~~V~~kk~~~~-------~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~-~~~~  341 (449)
                      |++++++|+++.++++++.|+.+++       .+++++++|+++.+.++++|.+++.|+++..+......-.+.. ....
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            7899999999999999999997754       5789999999999999999999998887754321111000111 2345


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhhh
Q 013132          342 LSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSNI  413 (449)
Q Consensus       342 ~~~l~~~gv~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~~  413 (449)
                      +..++.+|++++++|+..|.+++++||+++++.+++|+++.++.|+++|||++|+ +..|.++.+.|.++|++
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            6677889999999999999999999999999999999999999999999999998 58899999999999963

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.64  E-value=1.5e-13  Score=136.18  Aligned_cols=257  Identities=18%  Similarity=0.162  Sum_probs=178.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHH-HhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 013132          128 GFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSW-TVGLPQRAPINKELLVILTPVAFCHALGHVMS  206 (449)
Q Consensus       128 ~~~~~~w~~~s~~~~i~nK~~l~~fp~P~~lt~~r~l~~~l~lli~~-~~~~~~~~~~~~~~~~~~l~~gl~~~~~~~~~  206 (449)
                      ..-+++|+....    ..|++. .++.++..   |+.++.+++.... ..+.+++  ..++.+..-+..|++..+++.++
T Consensus         7 lia~~~wGs~g~----~~k~~~-g~~~~~~~---~~~~g~l~~~~~~~~~~~~~~--~~~~~~~~g~l~G~~w~ig~~~~   76 (290)
T TIGR00776         7 LIPALFWGSFVL----INVKIG-GGPYSQTL---GTTFGALILSIAIAIFVLPEF--WALSIFLVGLLSGAFWALGQINQ   76 (290)
T ss_pred             HHHHHHHhhhHH----HHhccC-CCHHHHHH---HHHHHHHHHHHHHHHHhCCcc--cccHHHHHHHHHHHHHHhhhhhH
Confidence            344566765544    345554 44434433   6767766554322 2222221  12455565667777788889999


Q ss_pred             HHhhcccchHHHHHHHh-hHHHHHHHHHHHHcCcccChhh----HHHHHHHHhhhhhhcccccc-------cc-HHHHHH
Q 013132          207 NVSFATVAVSFTHTIKA-LEPFFNAAASQFVLGHQIPLSL----WLSLAPVVIGVSMASLTELS-------FN-WTGFIS  273 (449)
Q Consensus       207 ~~sL~~vsvs~a~iiks-~~Pift~lls~l~l~e~~s~~~----~lsllliv~Gv~L~~~~e~~-------f~-~~G~l~  273 (449)
                      +.+.++++++.+..+-+ +.+++..+++.+++||+.+.++    ++++++++.|+.+....+.+       .+ ..|+++
T Consensus        77 ~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~Gi~~  156 (290)
T TIGR00776        77 FKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKKGILL  156 (290)
T ss_pred             HHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhhHHHH
Confidence            99999999999988888 8888999999999999999999    99999999999987643211       33 689999


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCChHHH---HHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHHHHHHHH
Q 013132          274 AMISNIAFTYRSIYSKKAMTGMDSTNV---YAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGM  350 (449)
Q Consensus       274 ~l~s~l~~a~~~V~~kk~~~~~~~~~l---~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv  350 (449)
                      ++++.++|+++.+..|+.  +.|+.+.   +++...++.+++.+... ...+..         .+    ..+.. +..|+
T Consensus       157 ~l~sg~~y~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~---------~~----~~~~~-~~~Gi  219 (290)
T TIGR00776       157 LLMSTIGYLVYVVVAKAF--GVDGLSVLLPQAIGMVIGGIIFNLGHI-LAKPLK---------KY----AILLN-ILPGL  219 (290)
T ss_pred             HHHHHHHHHHHHHHHHHc--CCCcceehhHHHHHHHHHHHHHHHHHh-cccchH---------HH----HHHHH-HHHHH
Confidence            999999999999999986  4788777   44433334443333221 011110         01    11112 22555


Q ss_pred             HHHHHHHHHHHHhh-ccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HH----HHHHHHHhhhhhh
Q 013132          351 FYHLYNQLATNTLE-RVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SF----HDLCADIHPEFCS  411 (449)
Q Consensus       351 ~~~~~~~~~~~~l~-~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~----iGg~lil~Gv~ly  411 (449)
                      .....+...+...+ +.++.+.++...++|+.+++.++++++|+.++ +.    +|.++++.|+.+.
T Consensus       220 ~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~  286 (290)
T TIGR00776       220 MWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANIL  286 (290)
T ss_pred             HHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHH
Confidence            53333333345677 99999999999999999999999999999997 56    8889999988765

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.62  E-value=4e-13  Score=126.26  Aligned_cols=246  Identities=15%  Similarity=0.168  Sum_probs=189.8

Q ss_pred             HHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHh
Q 013132          144 LNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKA  223 (449)
Q Consensus       144 ~nK~~l~~fp~P~~lt~~r~l~~~l~lli~~~~~~~~~~~~~~~~~~~~l~~gl~~~~~~~~~~~sL~~vsvs~a~iiks  223 (449)
                      +.|.++..++ |.-.+++|..++.++++..+.-+   +.+.++++|..++.-|+.....+.+.|.|++.++.+.+..+-.
T Consensus        30 ~Ak~LFP~vG-~~g~t~lRl~~aaLIll~l~RPw---r~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiEF  105 (292)
T COG5006          30 FAKSLFPLVG-AAGVTALRLAIAALILLALFRPW---RRRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIEF  105 (292)
T ss_pred             HHHHHccccC-hhhHHHHHHHHHHHHHHHHhhHH---HhccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhh
Confidence            4677777777 88999999999999887766433   3345788899999999988888899999999999999999999


Q ss_pred             hHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhcccc---ccccHHHHHHHHHHHHHHHHHHHHHHhhhcCCChHHH
Q 013132          224 LEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTE---LSFNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNV  300 (449)
Q Consensus       224 ~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e---~~f~~~G~l~~l~s~l~~a~~~V~~kk~~~~~~~~~l  300 (449)
                      +-|+.+++++.    +|.  +..+.+.+.+.|+.+.....   .+.|..|..+++.+..||+.|.+..||.-+..+....
T Consensus       106 ~GPL~vA~~~s----Rr~--~d~vwvaLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g~~g  179 (292)
T COG5006         106 TGPLAVALLSS----RRL--RDFVWVALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYIVLGQRAGRAEHGTAG  179 (292)
T ss_pred             ccHHHHHHHhc----cch--hhHHHHHHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHHHHcchhcccCCCchH
Confidence            99997776653    333  34444555777777664322   3468999999999999999999999998777777888


Q ss_pred             HHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHHHHHHHHHHHHHH-HHHHHHhhccChhHHHHHhhhhH
Q 013132          301 YAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYN-QLATNTLERVAPLTHAVGNVLKR  379 (449)
Q Consensus       301 ~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~-~~~~~~l~~isp~t~Si~~~lk~  379 (449)
                      ..+.+..+.++.+|+.....++.+...            .++..-+..++++...- .+..-.+++.++-++++...++|
T Consensus       180 ~a~gm~vAaviv~Pig~~~ag~~l~~p------------~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLeP  247 (292)
T COG5006         180 VAVGMLVAALIVLPIGAAQAGPALFSP------------SLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEP  247 (292)
T ss_pred             HHHHHHHHHHHHhhhhhhhcchhhcCh------------HHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhH
Confidence            888899999999999886555544321            12222233344443322 23334789999999999999999


Q ss_pred             HHHHHHHHHhhCccchh-HHHHHHHHHhhhhhh
Q 013132          380 VFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCS  411 (449)
Q Consensus       380 v~~il~sillfge~ls~-~~iGg~lil~Gv~ly  411 (449)
                      .++.+.|++++||.+|+ |+.|..+++.+..-.
T Consensus       248 a~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~  280 (292)
T COG5006         248 ALAALSGLIFLGETLTLIQWLAIAAVIAASAGS  280 (292)
T ss_pred             HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcc
Confidence            99999999999999997 788988888776644

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.58  E-value=2.4e-13  Score=131.29  Aligned_cols=208  Identities=16%  Similarity=0.197  Sum_probs=157.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccccc--
Q 013132          187 ELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTEL--  264 (449)
Q Consensus       187 ~~~~~~l~~gl~~~~~~~~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e~--  264 (449)
                      ++...+...++++++.+.+.+.++++++++.+++++.+..++|++++++++|+|++.++|+++++.+.|+.+....+.  
T Consensus        15 ~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~   94 (244)
T PF04142_consen   15 KDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS   94 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence            445556677788999999999999999999999999999999999999999999999999999999999998753211  


Q ss_pred             -------c--------ccHHHHHHHHHHHHHHHHHHHHHHhhhcCC--ChHHHHHHHHHHHHHHHHHHHHHhhchhhhhh
Q 013132          265 -------S--------FNWTGFISAMISNIAFTYRSIYSKKAMTGM--DSTNVYAYTSIIALLFCIPPAVLIEGPQLMQY  327 (449)
Q Consensus       265 -------~--------f~~~G~l~~l~s~l~~a~~~V~~kk~~~~~--~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~  327 (449)
                             +        ....|+++.++++++.++..++.+|.+|+-  +.+......+..|.++.++...+.++....+.
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~  174 (244)
T PF04142_consen   95 SDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISES  174 (244)
T ss_pred             cccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhcccccccccC
Confidence                   1        125899999999999999999999999864  44555556667777776666555454443333


Q ss_pred             hHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchhH-HHHHH
Q 013132          328 GFKAAIAKVGLFKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTAS-FHDLC  402 (449)
Q Consensus       328 ~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~~-~iGg~  402 (449)
                      ++.+.+   ++ ..+..++..++.+....    ..+++.+.+.-.....+.-+++.+.++++||.+++.. .+|.+
T Consensus       175 g~f~G~---~~-~~~~~i~~~a~gGllva----~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~  242 (244)
T PF04142_consen  175 GFFHGY---SW-WVWIVIFLQAIGGLLVA----FVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAA  242 (244)
T ss_pred             Cchhhc---ch-HHHHHHHHHHHhhHHHH----HHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhhee
Confidence            332211   11 12222333333333333    3789999999999999999999999999999999985 55644

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.57  E-value=7.2e-13  Score=125.98  Aligned_cols=260  Identities=16%  Similarity=0.194  Sum_probs=192.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccccc----
Q 013132          189 LVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTEL----  264 (449)
Q Consensus       189 ~~~~l~~gl~~~~~~~~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e~----  264 (449)
                      .+..++-+++-..+..+-++++.+++++.+|+++...-+|+.+++..+++++++.++|++++.++.|++++...|.    
T Consensus        86 p~lfl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~  165 (372)
T KOG3912|consen   86 PVLFLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVT  165 (372)
T ss_pred             cceecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeeccccc
Confidence            3456678899888888899999999999999999999999999999999999999999999999999998765432    


Q ss_pred             ------cccHHHHHHHHHHHHHHHHHHHHHHhhhc--CCChHHHHHHHHHHHHHHHHHHH----HHhhc------hhhhh
Q 013132          265 ------SFNWTGFISAMISNIAFTYRSIYSKKAMT--GMDSTNVYAYTSIIALLFCIPPA----VLIEG------PQLMQ  326 (449)
Q Consensus       265 ------~f~~~G~l~~l~s~l~~a~~~V~~kk~~~--~~~~~~l~~~~s~~s~l~Llp~a----l~~e~------~~~~~  326 (449)
                            +.-..|.++.+++-+..|.+.++-+|.++  +++|.+...|..++|.+++...+    .+..+      +.-.-
T Consensus       166 ~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~  245 (372)
T KOG3912|consen  166 DPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVL  245 (372)
T ss_pred             CCccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcch
Confidence                  23368999999999999999999888776  46789999999888866543333    22111      11101


Q ss_pred             hhHHHHHhhhch-hHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHH
Q 013132          327 YGFKAAIAKVGL-FKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCAD  404 (449)
Q Consensus       327 ~~~~~~~~~~~~-~~~~~~l~~~gv~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~li  404 (449)
                      .+|.+.+...+- +.+...+...-+.-.++|+......+..|+.|-++...++..+.-++++..+.|.++. |..|.++.
T Consensus       246 eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliL  325 (372)
T KOG3912|consen  246 EDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLIL  325 (372)
T ss_pred             hhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHH
Confidence            234444433221 1122111111122234577666788899999999999999999999999999999997 78999999


Q ss_pred             Hhhhhhhhhhh--hhhhhhcCC-CchhhhhhhccccccccccCCCCC
Q 013132          405 IHPEFCSNIRF--SWQAQFLRP-SSFVAYQYYCSHKETRILDRKPSI  448 (449)
Q Consensus       405 l~Gv~ly~~~~--~~q~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  448 (449)
                      +.|+++||...  .+.+....+ -+..+-+.+|-+++++|=++.+.|
T Consensus       326 i~Gi~lY~~il~~~w~r~~~~p~lae~~~~~r~gg~~~pi~~~~~~~  372 (372)
T KOG3912|consen  326 IMGIILYNQILFLDWYRAAVAPWLAERYVDLRTGGAAAPISRPADVI  372 (372)
T ss_pred             HHHHHHHHHHHhhhhhhhhhcchHHHHHHHhccCCcCCCcccccccC
Confidence            99999998663  333333333 333333447888888887776643

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.45  E-value=1.3e-14  Score=136.92  Aligned_cols=270  Identities=16%  Similarity=0.096  Sum_probs=183.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 013132          126 VTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHVM  205 (449)
Q Consensus       126 ~i~~~~~~w~~~s~~~~i~nK~~l~~fp~P~~lt~~r~l~~~l~lli~~~~~~~~~~~~~~~~~~~~l~~gl~~~~~~~~  205 (449)
                      .+.+..+- |++|.++.+..|...+   .|..+...|+++-.+..+++....+..... +...-+.++..|++.+.+...
T Consensus        39 gl~l~~vs-~ff~~~~vv~t~~~e~---~p~e~a~~r~l~~mlit~pcliy~~~~v~g-p~g~R~~LiLRg~mG~tgvml  113 (346)
T KOG4510|consen   39 GLLLLTVS-YFFNSCMVVSTKVLEN---DPMELASFRLLVRMLITYPCLIYYMQPVIG-PEGKRKWLILRGFMGFTGVML  113 (346)
T ss_pred             CceehhhH-HHHhhHHHhhhhhhcc---ChhHhhhhhhhhehhhhheEEEEEeeeeec-CCCcEEEEEeehhhhhhHHHH
Confidence            33344444 5567777666654443   277777777655554444443221111100 111123345667777778888


Q ss_pred             HHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccc-----c---c------cccHHHH
Q 013132          206 SNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLT-----E---L------SFNWTGF  271 (449)
Q Consensus       206 ~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~-----e---~------~f~~~G~  271 (449)
                      .++|++|++.+.+.+|..++|+||.++++.++||++++...++.++.+.|+++.+-+     |   .      +.+..|.
T Consensus       114 myya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~gt  193 (346)
T KOG4510|consen  114 MYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDIPGT  193 (346)
T ss_pred             HHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccCCch
Confidence            899999999999999999999999999999999999999999999999999987521     1   1      2345788


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHHHHHHHHH
Q 013132          272 ISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMF  351 (449)
Q Consensus       272 l~~l~s~l~~a~~~V~~kk~~~~~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~  351 (449)
                      ..++.+++.-+.-.++.|+.-++.+......|-+.++++.-+.........++.+ ...      ++    +.++..|++
T Consensus       194 ~aai~s~lf~asvyIilR~iGk~~h~~msvsyf~~i~lV~s~I~~~~ig~~~lP~-cgk------dr----~l~~~lGvf  262 (346)
T KOG4510|consen  194 VAAISSVLFGASVYIILRYIGKNAHAIMSVSYFSLITLVVSLIGCASIGAVQLPH-CGK------DR----WLFVNLGVF  262 (346)
T ss_pred             HHHHHhHhhhhhHHHHHHHhhccccEEEEehHHHHHHHHHHHHHHhhccceecCc-ccc------ce----EEEEEehhh
Confidence            8888888888877788888878888765555656666665544333222112211 111      11    123456788


Q ss_pred             HHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchhH-HHHHHHHHhhhhhh
Q 013132          352 YHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTAS-FHDLCADIHPEFCS  411 (449)
Q Consensus       352 ~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~~-~iGg~lil~Gv~ly  411 (449)
                      ++..++...+.+++-.+...++..+..-+++.+..+++|||.+++. +.|+++++......
T Consensus       263 gfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~  323 (346)
T KOG4510|consen  263 GFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWV  323 (346)
T ss_pred             hhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHH
Confidence            8877777778888777777888999999999999999999999986 45555544444433

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.45  E-value=1.7e-10  Score=111.28  Aligned_cols=264  Identities=13%  Similarity=0.166  Sum_probs=174.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHH--HHhCCCCCCC--CCHHHHHHHHHHHHHHHHHHHH
Q 013132          130 FFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVS--WTVGLPQRAP--INKELLVILTPVAFCHALGHVM  205 (449)
Q Consensus       130 ~~~~w~~~s~~~~i~nK~~l~~fp~P~~lt~~r~l~~~l~lli~--~~~~~~~~~~--~~~~~~~~~l~~gl~~~~~~~~  205 (449)
                      .-++|+..-.    +-| .++..| +.-+..-|...+..+++..  ..++.+...+  -+++.+......+++.+.+...
T Consensus        15 Ay~lwG~lp~----y~k-ll~~~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li~~nW~l   88 (293)
T COG2962          15 AYLLWGLLPL----YFK-LLEPLP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLIGLNWWL   88 (293)
T ss_pred             HHHHHHHHHH----HHH-HHccCC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence            3355655443    344 446666 7778888988877765432  2222111111  0223455555666666666677


Q ss_pred             HHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccccccccHHHHHHHHHHHHHHHHHH
Q 013132          206 SNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYRS  285 (449)
Q Consensus       206 ~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e~~f~~~G~l~~l~s~l~~a~~~  285 (449)
                      ..||...--+=-+..-....|++.++++++++|||+++.+++++.+..+||..-.....++.|..+..    +++|++|.
T Consensus        89 fiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwval~l----a~sf~~Yg  164 (293)
T COG2962          89 FIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWVALAL----ALSFGLYG  164 (293)
T ss_pred             hheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHH----HHHHHHHH
Confidence            77888876666677778889999999999999999999999999999999999988888888776644    56799998


Q ss_pred             HHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHhh-chhhhhhhHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013132          286 IYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIE-GPQLMQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQLATNTLE  364 (449)
Q Consensus       286 V~~kk~~~~~~~~~l~~~~s~~s~l~Llp~al~~e-~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~l~  364 (449)
                      ..-|+.  ++|+.+-...-.+.-....+...++.+ .++..        ...+. .....++..|.....--.+-....+
T Consensus       165 l~RK~~--~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~~~--------~~~~~-~~~~LLv~aG~vTavpL~lf~~aa~  233 (293)
T COG2962         165 LLRKKL--KVDALTGLTLETLLLLPVALIYLLFLADSGQFL--------QQNAN-SLWLLLVLAGLVTAVPLLLFAAAAK  233 (293)
T ss_pred             HHHHhc--CCchHHhHHHHHHHHhHHHHHHHHHHhcCchhh--------hcCCc-hHHHHHHHhhHHHHHHHHHHHHHHh
Confidence            777765  566655443333222222222222222 22111        00111 2233345555544222111123678


Q ss_pred             ccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhhhh
Q 013132          365 RVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSNIR  414 (449)
Q Consensus       365 ~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~~~  414 (449)
                      +++=.+.++..++.|....+++++++||+++. +.+..+.+-.|+.+|...
T Consensus       234 ~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d  284 (293)
T COG2962         234 RLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSID  284 (293)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            88889999999999999999999999999997 688889998998888655

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.44  E-value=2.1e-12  Score=127.52  Aligned_cols=221  Identities=15%  Similarity=0.176  Sum_probs=167.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccccc--
Q 013132          187 ELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTEL--  264 (449)
Q Consensus       187 ~~~~~~l~~gl~~~~~~~~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e~--  264 (449)
                      +..|..+..+.+....++++|.||.|++++..+++.++.-+||..++.++.+||+++.+.+++++.++|+++++.+|.  
T Consensus       157 ~~ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~  236 (416)
T KOG2765|consen  157 QTAKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ  236 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc
Confidence            445555666666667789999999999999999999999999999999999999999999999999999999987632  


Q ss_pred             ------cccHHHHHHHHHHHHHHHHHHHHHHhhhcC----CChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHh
Q 013132          265 ------SFNWTGFISAMISNIAFTYRSIYSKKAMTG----MDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIA  334 (449)
Q Consensus       265 ------~f~~~G~l~~l~s~l~~a~~~V~~kk~~~~----~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~  334 (449)
                            +-...|.++++++++.||.|.++.||...+    +|--.+..+..++..+++.|..++.+.-........    
T Consensus       237 ~~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP----  312 (416)
T KOG2765|consen  237 NSDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELP----  312 (416)
T ss_pred             cccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCC----
Confidence                  234789999999999999999999987653    344556667888888888888766532211111110    


Q ss_pred             hhchhHHHHHHHHHH-HHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhh
Q 013132          335 KVGLFKFLSDLFWIG-MFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSN  412 (449)
Q Consensus       335 ~~~~~~~~~~l~~~g-v~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~  412 (449)
                      ...  ++. .+++.+ +..+.--+.+.+..-.++|++..+...+...++++..+++=|.++++ ..+|.+.++.|.+..|
T Consensus       313 ~~~--q~~-~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn  389 (416)
T KOG2765|consen  313 SST--QFS-LVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVN  389 (416)
T ss_pred             CCc--eeE-eeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhhee
Confidence            000  111 111122 11222223333466689999999999999999999999999999998 5889889999999888


Q ss_pred             hh
Q 013132          413 IR  414 (449)
Q Consensus       413 ~~  414 (449)
                      ..
T Consensus       390 ~~  391 (416)
T KOG2765|consen  390 IS  391 (416)
T ss_pred             cc
Confidence            77

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.38  E-value=4e-10  Score=111.50  Aligned_cols=217  Identities=15%  Similarity=0.203  Sum_probs=160.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhcccc-----
Q 013132          189 LVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTE-----  263 (449)
Q Consensus       189 ~~~~l~~gl~~~~~~~~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e-----  263 (449)
                      ...+...++++++.+.+.+.++.+.+++++++...+..+.|+++.++++++|.++++|.++++.+.|+.+...++     
T Consensus        92 ~lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~  171 (345)
T KOG2234|consen   92 TLKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTG  171 (345)
T ss_pred             HHHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCC
Confidence            334555667888887799999999999999999999999999999999999999999999999999999986221     


Q ss_pred             ------ccccHHHHHHHHHHHHHHHHHHHHHHhhhcC--CChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhh
Q 013132          264 ------LSFNWTGFISAMISNIAFTYRSIYSKKAMTG--MDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAK  335 (449)
Q Consensus       264 ------~~f~~~G~l~~l~s~l~~a~~~V~~kk~~~~--~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~  335 (449)
                            .+..+.|+...+.+++..++..+|.+|.+|+  .+-+......+.+|.+..+...+..|+......++.   . 
T Consensus       172 a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff---~-  247 (345)
T KOG2234|consen  172 AKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFF---Y-  247 (345)
T ss_pred             ccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccccCCcc---c-
Confidence                  1124789999999999999999999999975  444444444455666655555444444333212221   1 


Q ss_pred             hchhH-HHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchhH-HHHHHHHHhhhhhhhh
Q 013132          336 VGLFK-FLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTAS-FHDLCADIHPEFCSNI  413 (449)
Q Consensus       336 ~~~~~-~~~~l~~~gv~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~~-~iGg~lil~Gv~ly~~  413 (449)
                       |+.. .+..++..++.+-+..+    .+++.+-..-.....+..+++.+.|+.+||-++|.. .+|..+++..+++|+.
T Consensus       248 -G~s~~vw~vVl~~a~gGLlvs~----v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~  322 (345)
T KOG2234|consen  248 -GYSSIVWLVVLLNAVGGLLVSL----VMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSL  322 (345)
T ss_pred             -cccHHHHHHHHHHhccchhHHH----HHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhc
Confidence             2222 22223333443333332    567777777777777888999999999999999985 8899999999999984


Q ss_pred             h
Q 013132          414 R  414 (449)
Q Consensus       414 ~  414 (449)
                      .
T Consensus       323 ~  323 (345)
T KOG2234|consen  323 Y  323 (345)
T ss_pred             C
Confidence            3

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.34  E-value=6.9e-12  Score=119.23  Aligned_cols=261  Identities=14%  Similarity=0.149  Sum_probs=188.7

Q ss_pred             HHHHHHHhhCC-chHHHHHHHHHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcc-cchHHHH
Q 013132          143 ILNKKVYNYFP-YPYFVSVIHLLVGVVYCLVSWT-VGLPQRAPINKELLVILTPVAFCHALGHVMSNVSFAT-VAVSFTH  219 (449)
Q Consensus       143 i~nK~~l~~fp-~P~~lt~~r~l~~~l~lli~~~-~~~~~~~~~~~~~~~~~l~~gl~~~~~~~~~~~sL~~-vsvs~a~  219 (449)
                      ++-+.+.++.| ...++|+.|+++-+.--++..- .... +++++.+++..  .+ .++.+..+++|.++++ ++.+...
T Consensus        20 v~lE~L~~~~pgsgNLITFaqFlFia~eGlif~skf~~~-k~kiplk~Y~i--~V-~mFF~vnv~NN~al~f~I~~PlHi   95 (330)
T KOG1583|consen   20 VFLELLVRNEPGSGNLITFAQFLFIATEGLIFTSKFFTV-KPKIPLKDYAI--TV-AMFFIVNVTNNYALKFNIPMPLHI   95 (330)
T ss_pred             HHHHHHHHhCCCCeeehHHHHHHHHHHhceeeecccccc-CCCCchhhhhe--eh-heeeeeeeeccceeeecccceEEE
Confidence            44556666665 3467888999876654333221 1211 24555544332  22 3344557899999996 8999999


Q ss_pred             HHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccc---cc--------------ccc--HHHHHHHHHHHHH
Q 013132          220 TIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLT---EL--------------SFN--WTGFISAMISNIA  280 (449)
Q Consensus       220 iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~---e~--------------~f~--~~G~l~~l~s~l~  280 (449)
                      ++++..++-++.+++++.|+|.+.+++.+.+++.+|+++++..   |.              ++.  ..|+.+...+.+.
T Consensus        96 IfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~  175 (330)
T KOG1583|consen   96 IFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLL  175 (330)
T ss_pred             EEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999987632   11              111  3688888889999


Q ss_pred             HHHHHHHHHhhhcC--CChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhh-------hc--hhHHHHHHHHHH
Q 013132          281 FTYRSIYSKKAMTG--MDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAK-------VG--LFKFLSDLFWIG  349 (449)
Q Consensus       281 ~a~~~V~~kk~~~~--~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~-------~~--~~~~~~~l~~~g  349 (449)
                      .|...++++...++  .++-+.++|+-.++..    ..++...+...  .|..+...       .|  .+..+..+++..
T Consensus       176 sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP----~Flf~~~div~--~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~  249 (330)
T KOG1583|consen  176 SAYMGIYQETTYQKYGKHWKEALFYTHFLSLP----LFLFMGDDIVS--HWRLAFKSESYLIPLLGFKVPSMWVYLLFNV  249 (330)
T ss_pred             HHHHHHHHHHHHHHhcCChHHHHHHHHHhccc----hHHHhcchHHH--HHHHHhcCcceeccccCccccHHHHHHHHHH
Confidence            99988988876664  5788999999876644    43443332221  22222221       11  234455667777


Q ss_pred             HHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhhh
Q 013132          350 MFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSNI  413 (449)
Q Consensus       350 v~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~~  413 (449)
                      +..|..--..|.+-.+++++|.+++-++++.+..++|++.|++++++ .++|.+++.+|.++|..
T Consensus       250 L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~  314 (330)
T KOG1583|consen  250 LTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFAN  314 (330)
T ss_pred             HHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence            77776666667788899999999999999999999999999999998 59999999999999853

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.16  E-value=4.2e-10  Score=95.88  Aligned_cols=118  Identities=17%  Similarity=0.305  Sum_probs=97.7

Q ss_pred             HHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHH-HHhCCCCCCCCCHHHHHHHHHHHHH-HHHHHHHHHHhhcccchHHH
Q 013132          141 FNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVS-WTVGLPQRAPINKELLVILTPVAFC-HALGHVMSNVSFATVAVSFT  218 (449)
Q Consensus       141 ~~i~nK~~l~~fp~P~~lt~~r~l~~~l~lli~-~~~~~~~~~~~~~~~~~~~l~~gl~-~~~~~~~~~~sL~~vsvs~a  218 (449)
                      +.+++|+..++++ |...+.+|+.++.+ +++. ...+..+....+.+++...+..+++ ...+..+.+.++++.+++.+
T Consensus         6 ~~~~~k~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~   83 (126)
T PF00892_consen    6 YSVFSKKLLKKIS-PLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYISASIV   83 (126)
T ss_pred             HHHHHHHHhccCC-HHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcchhHH
Confidence            3467899999888 89999999999987 4332 2222222345566777778888877 57788999999999999999


Q ss_pred             HHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhc
Q 013132          219 HTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMAS  260 (449)
Q Consensus       219 ~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~  260 (449)
                      +++..++|+++++++++++||++++++++|++++++|+++..
T Consensus        84 ~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   84 SILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999998764

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>TIGR00803 nst UDP-galactose transporter

Probab=98.95  E-value=6.8e-09  Score=98.79  Aligned_cols=188  Identities=14%  Similarity=0.120  Sum_probs=126.5

Q ss_pred             cchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhcccc-------------------c--------c
Q 013132          213 VAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTE-------------------L--------S  265 (449)
Q Consensus       213 vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e-------------------~--------~  265 (449)
                      ++++.....|+..++++++.+..+.+++.+..++++..++..|+......+                   .        .
T Consensus         2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g   81 (222)
T TIGR00803         2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG   81 (222)
T ss_pred             ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence            567778889999999999999999999999999999999999987532111                   0        1


Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHH-----HHhhchhhhhhhHHHHHhhhchhH
Q 013132          266 FNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPA-----VLIEGPQLMQYGFKAAIAKVGLFK  340 (449)
Q Consensus       266 f~~~G~l~~l~s~l~~a~~~V~~kk~~~~~~~~~l~~~~s~~s~l~Llp~a-----l~~e~~~~~~~~~~~~~~~~~~~~  340 (449)
                      ..+.|....+.+.++.++..++.++..++.+..   .|...++..++.+..     ...++......++     ..+++.
T Consensus        82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~  153 (222)
T TIGR00803        82 NPVVGLSAVLSALLSSGFAGVYFEKILKDGDTM---FWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGF-----FIGYPT  153 (222)
T ss_pred             cHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCc---hHHHHHHHHHHHHHHHHHHHhhcccchhhccCc-----ccCCch
Confidence            236788888889999999999999987654321   333333332222221     1111111101110     011112


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhh
Q 013132          341 FLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCS  411 (449)
Q Consensus       341 ~~~~l~~~gv~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly  411 (449)
                      ..+.+++   .......+..+++++.++.+.++...+++++++++|+++|||+++. +.+|+.+++.|+++|
T Consensus       154 ~~~~~~~---~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       154 AVWIVGL---LNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             HHHHHHH---HHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence            2222221   1222223344589999999999999999999999999999999998 588999999998876

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.87  E-value=4.1e-07  Score=88.34  Aligned_cols=209  Identities=16%  Similarity=0.131  Sum_probs=144.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHH-hhHHHHHHHHHHHHcCcccChhhH----HHHHHHHhhhhhhc
Q 013132          186 KELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIK-ALEPFFNAAASQFVLGHQIPLSLW----LSLAPVVIGVSMAS  260 (449)
Q Consensus       186 ~~~~~~~l~~gl~~~~~~~~~~~sL~~vsvs~a~iik-s~~Pift~lls~l~l~e~~s~~~~----lsllliv~Gv~L~~  260 (449)
                      .+.+...+..|++..++....+.|++++++|.+--+. ..+-+.+.+++++++||.-+...+    +++++++.|+.+.+
T Consensus        42 ~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts  121 (269)
T PF06800_consen   42 GTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTS  121 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhc
Confidence            3677778899999999999999999999999887775 467788999999999998775544    58889999999988


Q ss_pred             ccccc--------ccHHHHHHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHH
Q 013132          261 LTELS--------FNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAA  332 (449)
Q Consensus       261 ~~e~~--------f~~~G~l~~l~s~l~~a~~~V~~kk~~~~~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~  332 (449)
                      ..|.+        ....|+...+++.+.|..|.+.-|-.  +.|++....=++ ++.++..............       
T Consensus       122 ~~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~--~~~~~~~~lPqa-iGm~i~a~i~~~~~~~~~~-------  191 (269)
T PF06800_consen  122 YQDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKAF--HVSGWSAFLPQA-IGMLIGAFIFNLFSKKPFF-------  191 (269)
T ss_pred             cccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhc--CCChhHhHHHHH-HHHHHHHHHHhhccccccc-------
Confidence            76532        12469999999999999999997763  577766655332 2222221111111111111       


Q ss_pred             HhhhchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-H----HHHHHHHHhh
Q 013132          333 IAKVGLFKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-S----FHDLCADIHP  407 (449)
Q Consensus       333 ~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~----~iGg~lil~G  407 (449)
                       .+..+..     ++.|+.+-.-|...+...++.+..+.=...-+..+++.+.|+++++|+=+. +    .+|.++++.|
T Consensus       192 -~k~~~~n-----il~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G  265 (269)
T PF06800_consen  192 -EKKSWKN-----ILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIG  265 (269)
T ss_pred             -ccchHHh-----hHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHh
Confidence             1111222     234444444444445566777777766677788999999999999998664 2    4577777777


Q ss_pred             hhh
Q 013132          408 EFC  410 (449)
Q Consensus       408 v~l  410 (449)
                      ..+
T Consensus       266 ~il  268 (269)
T PF06800_consen  266 AIL  268 (269)
T ss_pred             hhc
Confidence            653

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=98.86  E-value=2.3e-08  Score=91.12  Aligned_cols=217  Identities=12%  Similarity=0.062  Sum_probs=150.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccccc--c
Q 013132          188 LLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTEL--S  265 (449)
Q Consensus       188 ~~~~~l~~gl~~~~~~~~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e~--~  265 (449)
                      .++...|.+++.++.++.+..+++.++++.++.+.++.-.|+.+++++.+|+|+..-++++.++.++|+++.++.|.  .
T Consensus        52 ~~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a  131 (290)
T KOG4314|consen   52 FFIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHA  131 (290)
T ss_pred             eeeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhh
Confidence            34556677788888889999999999999999999999999999999999999999999999999999999987654  3


Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHHHHH-----HHHhhchhhhhhhHHHHHhhhchhH
Q 013132          266 FNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPP-----AVLIEGPQLMQYGFKAAIAKVGLFK  340 (449)
Q Consensus       266 f~~~G~l~~l~s~l~~a~~~V~~kk~~~~~~~~~l~~~~s~~s~l~Llp~-----al~~e~~~~~~~~~~~~~~~~~~~~  340 (449)
                      .++.|+.+++.|+...++|.+..|....+-+--+...+++..++.=+...     .+.+.+...    |+. +...+|.-
T Consensus       132 ~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~VE~----~qs-FA~~PWG~  206 (290)
T KOG4314|consen  132 DEIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALILAFTGVEH----LQS-FAAAPWGC  206 (290)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHHHHHhchHH----HHH-HhhCCchh
Confidence            47899999999999999999999998765544444444454444433221     122222221    111 12223322


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccc-hh-HHHHHHHHHhhhhhhhhh
Q 013132          341 FLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYF-TA-SFHDLCADIHPEFCSNIR  414 (449)
Q Consensus       341 ~~~~l~~~gv~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~l-s~-~~iGg~lil~Gv~ly~~~  414 (449)
                      ..    ..+.....+|+.....+..+.|...|+.............+ +++|.. +. ...|.+++..|..+.-.+
T Consensus       207 l~----G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDi-L~q~l~~ntl~La~T~iI~i~FiLiiiP  277 (290)
T KOG4314|consen  207 LC----GAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDI-LFQELEFNTLFLAATCIICIGFILIIIP  277 (290)
T ss_pred             hh----hHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHH-HHHHHHHHHHHHHHHHHHHHhHHheecc
Confidence            22    11222223344333356778888888877655555556665 455544 44 477889999998887555

>COG2510 Predicted membrane protein [Function unknown]

Probab=98.85  E-value=2.4e-08  Score=85.04  Aligned_cols=119  Identities=18%  Similarity=0.263  Sum_probs=100.1

Q ss_pred             HHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHH-HHhCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHH
Q 013132          141 FNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVS-WTVGLPQ-RAPINKELLVILTPVAFCHALGHVMSNVSFATVAVSFT  218 (449)
Q Consensus       141 ~~i~nK~~l~~fp~P~~lt~~r~l~~~l~lli~-~~~~~~~-~~~~~~~~~~~~l~~gl~~~~~~~~~~~sL~~vsvs~a  218 (449)
                      ..++.|..+++.. |.+-+.+|-.+...++... ...|... ...++.+.|..+..-|+....+..+++.+++.-.+|..
T Consensus        18 ~~iF~KIGl~~vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~Yf~ALk~G~as~V   96 (140)
T COG2510          18 TPIFAKIGLEGVD-PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLYFRALKKGKASRV   96 (140)
T ss_pred             HHHHHHHhccccC-ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHHHHHHHhcCCcceE
Confidence            3478999999876 9999999999888776543 3333322 22356778888888888888889999999999999999


Q ss_pred             HHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhc
Q 013132          219 HTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMAS  260 (449)
Q Consensus       219 ~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~  260 (449)
                      .-+-.+.|+++++++.+++|||++.++|+|+++++.|+++.+
T Consensus        97 vPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          97 VPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             EEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            999999999999999999999999999999999999998765

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.83  E-value=2.1e-08  Score=85.33  Aligned_cols=105  Identities=16%  Similarity=0.305  Sum_probs=78.8

Q ss_pred             HHHHHHHHHHHHHH-HHhCCCC--CCCCCHHHHHHHHHHHHHHH-HHHHHHHHhhcccchHHHHHHHhhHHHHHHHHHHH
Q 013132          160 VIHLLVGVVYCLVS-WTVGLPQ--RAPINKELLVILTPVAFCHA-LGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQF  235 (449)
Q Consensus       160 ~~r~l~~~l~lli~-~~~~~~~--~~~~~~~~~~~~l~~gl~~~-~~~~~~~~sL~~vsvs~a~iiks~~Pift~lls~l  235 (449)
                      ++|+++..+++... ...+..+  .+.+.++.+..++..|++.. .+..+.+.|+++.+ +....+.++.|+|+++++.+
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~   80 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL   80 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence            46777777765433 2222211  01122234555666666654 67788999999999 58889999999999999999


Q ss_pred             HcCcccChhhHHHHHHHHhhhhhhcccccc
Q 013132          236 VLGHQIPLSLWLSLAPVVIGVSMASLTELS  265 (449)
Q Consensus       236 ~l~e~~s~~~~lsllliv~Gv~L~~~~e~~  265 (449)
                      ++|||++++++++++++++|+++...+|.+
T Consensus        81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   81 FFKERLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             HhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            999999999999999999999999887754

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=98.71  E-value=5.5e-09  Score=98.67  Aligned_cols=215  Identities=10%  Similarity=0.117  Sum_probs=157.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccccc--
Q 013132          187 ELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTEL--  264 (449)
Q Consensus       187 ~~~~~~l~~gl~~~~~~~~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e~--  264 (449)
                      ..|+..+.+|+.-.-++++-..|.||++..-...+-+-....+.+++++|+|.|..+.++.|+++..+|+.++...|.  
T Consensus        76 ~~~~hYilla~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~a  155 (336)
T KOG2766|consen   76 AKWRHYILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHA  155 (336)
T ss_pred             HHHHHhhheeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeecc
Confidence            457777788777666666666789999998888888866556899999999999999999999999999998865442  


Q ss_pred             ------cccHHHHHHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhch
Q 013132          265 ------SFNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGL  338 (449)
Q Consensus       265 ------~f~~~G~l~~l~s~l~~a~~~V~~kk~~~~~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~  338 (449)
                            +....|.++.++++-+||.-|+......++.|-.+++....++|+++-.+= ++.|......-.|.       +
T Consensus       156 gd~aggsnp~~GD~lvi~GATlYaVSNv~EEflvkn~d~~elm~~lgLfGaIIsaIQ-~i~~~~~~~tl~w~-------~  227 (336)
T KOG2766|consen  156 GDRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVKNADRVELMGFLGLFGAIISAIQ-FIFERHHVSTLHWD-------S  227 (336)
T ss_pred             ccccCCCCCccCcEEEEecceeeeeccccHHHHHhcCcHHHHHHHHHHHHHHHHHHH-HhhhccceeeEeeh-------H
Confidence                  223689999999999999999999988889999999999899988877665 33454433221221       1


Q ss_pred             hHHHHHH-HHHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchhH-HHHHHHHHhhhhhhhhh
Q 013132          339 FKFLSDL-FWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTAS-FHDLCADIHPEFCSNIR  414 (449)
Q Consensus       339 ~~~~~~l-~~~gv~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~~-~iGg~lil~Gv~ly~~~  414 (449)
                       .....+ +..++ +.+|.+. -.+++..|+..+.+.-.-...+++++  ..||-+++|. .+..+.++.|.++|..|
T Consensus       228 -~i~~yl~f~L~M-FllYsl~-pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~r  300 (336)
T KOG2766|consen  228 -AIFLYLRFALTM-FLLYSLA-PILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTR  300 (336)
T ss_pred             -HHHHHHHHHHHH-HHHHHhh-HHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeecc
Confidence             111111 11122 1223322 12577777777666555567777776  7888889996 78899999999999655

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=98.67  E-value=1.3e-07  Score=80.35  Aligned_cols=122  Identities=14%  Similarity=0.163  Sum_probs=90.6

Q ss_pred             HHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHHHHHHHHH-HHHHHH
Q 013132          279 IAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIGMF-YHLYNQ  357 (449)
Q Consensus       279 l~~a~~~V~~kk~~~~~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~-~~~~~~  357 (449)
                      ++|+.+.++.|+..++.|+....++....+.+ +++...+.+.......+         ..... .+...|.+ ....+.
T Consensus         1 ~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---------~~~~~-~~~~~~~~~~~~~~~   69 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKKISPLSITFWRFLIAGI-LLILLLILGRKPFKNLS---------PRQWL-WLLFLGLLGTALAYL   69 (126)
T ss_pred             ceeeeHHHHHHHHhccCCHHHHHHHHHHHHHH-HHHHHHhhccccccCCC---------hhhhh-hhhHhhccceehHHH
Confidence            46889999999999999999999999999988 66666655433211111         10111 12233333 234444


Q ss_pred             HHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhh
Q 013132          358 LATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCS  411 (449)
Q Consensus       358 ~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly  411 (449)
                      ..+..++++++...++...+.|+++.++++++++|++++ +.+|.++++.|+++.
T Consensus        70 ~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~  124 (126)
T PF00892_consen   70 LYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI  124 (126)
T ss_pred             HHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence            555689999999999999999999999999999999998 588999999998775

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.54  E-value=4.1e-06  Score=81.03  Aligned_cols=115  Identities=17%  Similarity=0.091  Sum_probs=88.8

Q ss_pred             HHHHHHHHHhhCC-chHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHhhcccchHHH
Q 013132          141 FNILNKKVYNYFP-YPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCH-ALGHVMSNVSFATVAVSFT  218 (449)
Q Consensus       141 ~~i~nK~~l~~fp-~P~~lt~~r~l~~~l~lli~~~~~~~~~~~~~~~~~~~~l~~gl~~-~~~~~~~~~sL~~vsvs~a  218 (449)
                      +++..|+..++.+ .+.....+++.++.+++++......+.. ..+.+.|...+..+++. .++..+.+.++++.+++.+
T Consensus       143 ~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~  221 (260)
T TIGR00950       143 GTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-QALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAA  221 (260)
T ss_pred             HHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHH
Confidence            3467888876654 2345555788888877765443322222 33556677677777664 5678889999999999999


Q ss_pred             HHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhh
Q 013132          219 HTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGV  256 (449)
Q Consensus       219 ~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv  256 (449)
                      .++..++|++++++++++++|+++..++.|..+++.|+
T Consensus       222 s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       222 SILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999986

>COG2510 Predicted membrane protein [Function unknown]

Probab=98.46  E-value=1.2e-06  Score=74.69  Aligned_cols=134  Identities=16%  Similarity=0.146  Sum_probs=96.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHHHHHHH
Q 013132          270 GFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIG  349 (449)
Q Consensus       270 G~l~~l~s~l~~a~~~V~~kk~~~~~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~g  349 (449)
                      -.++++++++.+++..++.|-.++++||..-+..-++...+++..+.......+. ...    +..    ..+..++++|
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~-~~~----~~~----k~~lflilSG   74 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLLVTGNWQA-GGE----IGP----KSWLFLILSG   74 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHhcCceec-ccc----cCc----ceehhhhHHH
Confidence            4688999999999999999999999999887777777777777666554322211 100    111    2333456677


Q ss_pred             HHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhh
Q 013132          350 MFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSN  412 (449)
Q Consensus       350 v~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~  412 (449)
                      +..-+-.++.|+.++.-.+....=..-..+++++++|++++||.++. +++|..++.+|..+..
T Consensus        75 la~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          75 LAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            66555555566677665555444445578899999999999999997 6899999999987654

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.43  E-value=1.1e-05  Score=80.20  Aligned_cols=139  Identities=12%  Similarity=0.084  Sum_probs=102.2

Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHH
Q 013132          265 SFNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSD  344 (449)
Q Consensus       265 ~f~~~G~l~~l~s~l~~a~~~V~~kk~~~~~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~  344 (449)
                      +....|++++++++++|+...++.|.. .++++.++.++...++.+++++........+.....    .  ..+... ..
T Consensus         4 ~~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~----~--~~~~~~-~~   75 (296)
T PRK15430          4 KQTRQGVLLALAAYFIWGIAPAYFKLI-YYVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTL----I--QTPQKI-FM   75 (296)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHH----H--cCHHHH-HH
Confidence            345689999999999999999999865 679999999999999988887765433211110000    0  011111 11


Q ss_pred             HHHHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhh
Q 013132          345 LFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCS  411 (449)
Q Consensus       345 l~~~gv~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly  411 (449)
                      ++..++....++.+.|..++.+++...++.....|+++.+++.++++|+++. +++|.++.+.|+.+.
T Consensus        76 ~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li  143 (296)
T PRK15430         76 LAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQ  143 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHH
Confidence            2233333444556667789999999999999999999999999999999998 588888888887765

>TIGR00688 rarD rarD protein

Probab=98.41  E-value=1.3e-05  Score=77.85  Aligned_cols=138  Identities=13%  Similarity=0.226  Sum_probs=100.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHHHHHH
Q 013132          269 TGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWI  348 (449)
Q Consensus       269 ~G~l~~l~s~l~~a~~~V~~kk~~~~~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~  348 (449)
                      .|++++++++++|+...+..|. ..++++.++.++-..++.+++++..............    ............+...
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~   76 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LKPLPATDILGHRMIWSFPFMLLSVTLFRQWAALIER----LKRIQKRPLILSLLLC   76 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hccCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHH----HhCcccchHHHHHHHH
Confidence            3889999999999999999998 4679999999999999988877765443211100000    1111111122233445


Q ss_pred             HHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhh
Q 013132          349 GMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCS  411 (449)
Q Consensus       349 gv~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly  411 (449)
                      |++....+.+.+..++++++.+.++.....|+++.+++.++++|+++. +.+|.++.+.|+.+.
T Consensus        77 g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li  140 (256)
T TIGR00688        77 GLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISN  140 (256)
T ss_pred             HHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence            555555555666789999999999999999999999999999999998 577888888887654

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.36  E-value=1.6e-05  Score=81.31  Aligned_cols=121  Identities=12%  Similarity=0.143  Sum_probs=87.9

Q ss_pred             HHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHH-HHhCCCC--C--CCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 013132          140 IFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVS-WTVGLPQ--R--APINKELLVILTPVAFCHALGHVMSNVSFATVA  214 (449)
Q Consensus       140 ~~~i~nK~~l~~fp~P~~lt~~r~l~~~l~lli~-~~~~~~~--~--~~~~~~~~~~~l~~gl~~~~~~~~~~~sL~~vs  214 (449)
                      .+++..|.....+|.+...++++.+++.+.+.+. .......  .  ...+... ..++..+++-.+..++.++++++.+
T Consensus       203 ~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~i~y~~i~t~lay~lw~~~v~~~g  281 (358)
T PLN00411        203 VSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITL-ITIVTMAIITSVYYVIHSWTVRHKG  281 (358)
T ss_pred             HHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchHH-HHHHHHHHHHHHHHHHHHHHHhccC
Confidence            3446778777788756677778888776655322 2211111  0  1112222 2234444544456778899999999


Q ss_pred             hHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhcc
Q 013132          215 VSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASL  261 (449)
Q Consensus       215 vs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~  261 (449)
                      ++.+.+...++|+|+++++++++||++++.+++|.+++++|+.++..
T Consensus       282 a~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~  328 (358)
T PLN00411        282 PLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMW  328 (358)
T ss_pred             chHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999998764

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.33  E-value=2.6e-05  Score=77.46  Aligned_cols=118  Identities=18%  Similarity=0.241  Sum_probs=86.9

Q ss_pred             HHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHhhcccchHHHH
Q 013132          141 FNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCH-ALGHVMSNVSFATVAVSFTH  219 (449)
Q Consensus       141 ~~i~nK~~l~~fp~P~~lt~~r~l~~~l~lli~~~~~~~~~~~~~~~~~~~~l~~gl~~-~~~~~~~~~sL~~vsvs~a~  219 (449)
                      +++..|+..++.+ |...+ ++.+++.+.+.+....... ....+...|...+.+|++. .+++.+.+.++++++++.++
T Consensus       163 ~~v~~r~~~~~~~-~~~~~-~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as  239 (293)
T PRK10532        163 YILSGQRAGAEHG-PATVA-IGSLIAALIFVPIGALQAG-EALWHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFG  239 (293)
T ss_pred             HHHHHHHHhccCC-chHHH-HHHHHHHHHHHHHHHHccC-cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHH
Confidence            4466777766555 55554 4555555555433332221 1223445555556777664 44677889999999999999


Q ss_pred             HHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhcc
Q 013132          220 TIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASL  261 (449)
Q Consensus       220 iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~  261 (449)
                      ++..++|+++++++++++||+++..+++|..++++|++....
T Consensus       240 ~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~  281 (293)
T PRK10532        240 TLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTL  281 (293)
T ss_pred             HHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999988754

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.26  E-value=3e-05  Score=77.10  Aligned_cols=119  Identities=16%  Similarity=0.213  Sum_probs=84.9

Q ss_pred             HHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHH
Q 013132          140 IFNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHVMSNVSFATVAVSFTH  219 (449)
Q Consensus       140 ~~~i~nK~~l~~fp~P~~lt~~r~l~~~l~lli~~~~~~~~~~~~~~~~~~~~l~~gl~~~~~~~~~~~sL~~vsvs~a~  219 (449)
                      .+++++|+..++.+ |...  .....+..+.......+.. ....+.+.|..++..++...+.+.+.+.++++.+++.++
T Consensus       170 ~~~v~~k~~~~~~~-~~~~--~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s  245 (295)
T PRK11689        170 AYCNVTRKYARGKN-GITL--FFILTALALWIKYFLSPQP-AMVFSLPAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLA  245 (295)
T ss_pred             HHHHHHhhccCCCC-chhH--HHHHHHHHHHHHHHHhcCc-cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHH
Confidence            44567887765544 5433  2222222222222222211 223455666666666666666788999999999999999


Q ss_pred             HHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccc
Q 013132          220 TIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLT  262 (449)
Q Consensus       220 iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~  262 (449)
                      ++...+|++.++++++++||+++..+++|.+++++|+.+....
T Consensus       246 ~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~  288 (295)
T PRK11689        246 TASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLA  288 (295)
T ss_pred             HHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhh
Confidence            9999999999999999999999999999999999999877543

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.25  E-value=3.9e-05  Score=76.11  Aligned_cols=120  Identities=14%  Similarity=0.154  Sum_probs=90.2

Q ss_pred             HHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHhhcccchHHHH
Q 013132          142 NILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWT-VGLPQRAPINKELLVILTPVAFCH-ALGHVMSNVSFATVAVSFTH  219 (449)
Q Consensus       142 ~i~nK~~l~~fp~P~~lt~~r~l~~~l~lli~~~-~~~~~~~~~~~~~~~~~l~~gl~~-~~~~~~~~~sL~~vsvs~a~  219 (449)
                      ++.+|+.-.  +++...+.+++.++.+.+.+... .+.......+.+.|..++..+++. .++..+.+.++++.+++.+.
T Consensus       166 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s  243 (292)
T PRK11272        166 SVWSSRLPL--PVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALAT  243 (292)
T ss_pred             HHHHHhcCC--CcchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHH
Confidence            456666533  23456677898888776554332 222111112456777777777764 45678899999999999999


Q ss_pred             HHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhcccc
Q 013132          220 TIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTE  263 (449)
Q Consensus       220 iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e  263 (449)
                      ++..++|+++++++++++||+++..+++|.++++.|+.+....+
T Consensus       244 ~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~  287 (292)
T PRK11272        244 SYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGK  287 (292)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999998876543

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.16  E-value=4.2e-05  Score=75.40  Aligned_cols=130  Identities=6%  Similarity=-0.039  Sum_probs=92.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHhh-chhhhhhhHHHHHhhhchhHHHHHHHHHH
Q 013132          271 FISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIE-GPQLMQYGFKAAIAKVGLFKFLSDLFWIG  349 (449)
Q Consensus       271 ~l~~l~s~l~~a~~~V~~kk~~~~~~~~~l~~~~s~~s~l~Llp~al~~e-~~~~~~~~~~~~~~~~~~~~~~~~l~~~g  349 (449)
                      +.+.++++++++.+++..|+..++.++.  ..+.+..+.+++.|+..... +..+...         .. ..+..++..+
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~---------~~-~~~~~~~~~~   70 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKEPDF--LWWALLAHSVLLTPYGLWYLAQVGWSRL---------PA-TFWLLLAISA   70 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCchhHH--HHHHHHHHHHHHHHHHHHhcccCCCCCc---------ch-hhHHHHHHHH
Confidence            5678899999999999999877664443  35555677777778766421 1111100         00 1111233444


Q ss_pred             HHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhh
Q 013132          350 MFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSN  412 (449)
Q Consensus       350 v~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~  412 (449)
                      +....+..+.+..++..++...+......|+++.+++++++||+++. +++|.++.+.|+++..
T Consensus        71 ~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~  134 (281)
T TIGR03340        71 VANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLG  134 (281)
T ss_pred             HHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHh
Confidence            44455555566688899999999999999999999999999999997 5889999999988764

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.16  E-value=6.5e-05  Score=63.79  Aligned_cols=63  Identities=16%  Similarity=0.267  Sum_probs=57.9

Q ss_pred             HHHHHHHHHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhc
Q 013132          198 CHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMAS  260 (449)
Q Consensus       198 ~~~~~~~~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~  260 (449)
                      ++.....+...+++.++.+.+..+-++.++++++++++++||++++++++|+.++++|+++..
T Consensus        46 ~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         46 CLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            355567888899999999999999999999999999999999999999999999999998765

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.07  E-value=0.00019  Score=71.41  Aligned_cols=123  Identities=17%  Similarity=0.205  Sum_probs=87.8

Q ss_pred             HHHHHHHHHHhhCCch--HHHHHHHHHHHHHHHHH-HHHhCCCC-----CCCCCHHHHHHHHHHHHHHH-HHHHHHHHhh
Q 013132          140 IFNILNKKVYNYFPYP--YFVSVIHLLVGVVYCLV-SWTVGLPQ-----RAPINKELLVILTPVAFCHA-LGHVMSNVSF  210 (449)
Q Consensus       140 ~~~i~nK~~l~~fp~P--~~lt~~r~l~~~l~lli-~~~~~~~~-----~~~~~~~~~~~~l~~gl~~~-~~~~~~~~sL  210 (449)
                      .++++.|+..++.+.+  .....++.+++.+.+.. ......+.     ....+.+.|..++.++++.+ ++..+.+.++
T Consensus       157 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l  236 (299)
T PRK11453        157 CGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLL  236 (299)
T ss_pred             HHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3446777765554433  33445555555543322 22222111     12345667777788876654 4678888999


Q ss_pred             cccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccc
Q 013132          211 ATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLT  262 (449)
Q Consensus       211 ~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~  262 (449)
                      ++.++..+..+..++|++.++++++++||+++..+++|..++++|+.+...+
T Consensus       237 ~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~  288 (299)
T PRK11453        237 GRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFG  288 (299)
T ss_pred             HhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcc
Confidence            9999999999999999999999999999999999999999999999887543

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=97.93  E-value=0.00011  Score=73.19  Aligned_cols=123  Identities=13%  Similarity=0.078  Sum_probs=85.8

Q ss_pred             HHHHHHHHHHHHh--hCCchHHHHHHHHHHHHHHHHHHHH-hCCCCCCC---------CC-HHHHHHHHHHHH-HHHHHH
Q 013132          138 NVIFNILNKKVYN--YFPYPYFVSVIHLLVGVVYCLVSWT-VGLPQRAP---------IN-KELLVILTPVAF-CHALGH  203 (449)
Q Consensus       138 s~~~~i~nK~~l~--~fp~P~~lt~~r~l~~~l~lli~~~-~~~~~~~~---------~~-~~~~~~~l~~gl-~~~~~~  203 (449)
                      ...++++.|+..+  ..+ |+.++.+++..+.+++++... .+......         .. ...+...+..++ .+...+
T Consensus       157 ~a~~~v~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (302)
T TIGR00817       157 FVSRNIFSKKAMTIKSLD-KTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQ  235 (302)
T ss_pred             HHHHHHHHHHhhccCCCC-cccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHH
Confidence            3445678888877  455 788889999888877765533 22111000         00 001111222222 222233


Q ss_pred             HHHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhcc
Q 013132          204 VMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASL  261 (449)
Q Consensus       204 ~~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~  261 (449)
                      .+.+.+++++++..+.+....+|+++++++++++||+++..+++|..++++|+.+...
T Consensus       236 ~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~  293 (302)
T TIGR00817       236 QVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSR  293 (302)
T ss_pred             HHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHH
Confidence            5566799999999999999999999999999999999999999999999999988764

specificities overlap.

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=97.85  E-value=0.00081  Score=59.57  Aligned_cols=125  Identities=14%  Similarity=0.127  Sum_probs=92.6

Q ss_pred             HHHHHHHHHHHHHHhh------CCchHHHHHHHHHHHHHHHHHHHH-hCCCCC----C-----CC--CHHHHHHHHHHHH
Q 013132          136 FLNVIFNILNKKVYNY------FPYPYFVSVIHLLVGVVYCLVSWT-VGLPQR----A-----PI--NKELLVILTPVAF  197 (449)
Q Consensus       136 ~~s~~~~i~nK~~l~~------fp~P~~lt~~r~l~~~l~lli~~~-~~~~~~----~-----~~--~~~~~~~~l~~gl  197 (449)
                      ......+++.|+.+++      -..++.+.......+.+.+++.+. .+..+.    .     +.  +.+.+..++..|+
T Consensus        10 ~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (153)
T PF03151_consen   10 LFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLILSGL   89 (153)
T ss_pred             HHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHHHHH
Confidence            4455666788888775      224666666666666666654433 222110    0     11  2345566666777


Q ss_pred             HHHHHHHHHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhc
Q 013132          198 CHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMAS  260 (449)
Q Consensus       198 ~~~~~~~~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~  260 (449)
                      +....+++.+..++++++-+.+++....-+++.+++.++++|+++..++.|+.+.++|+++.+
T Consensus        90 ~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ys  152 (153)
T PF03151_consen   90 LAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYS  152 (153)
T ss_pred             HHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheee
Confidence            777778889999999999999999999999999999999999999999999999999998754

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.69  E-value=0.01  Score=60.19  Aligned_cols=225  Identities=13%  Similarity=0.039  Sum_probs=134.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHH-hhHHHHHHHHHHHHcCccc---C----hhhHHHHHHHHhh
Q 013132          184 INKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIK-ALEPFFNAAASQFVLGHQI---P----LSLWLSLAPVVIG  255 (449)
Q Consensus       184 ~~~~~~~~~l~~gl~~~~~~~~~~~sL~~vsvs~a~iik-s~~Pift~lls~l~l~e~~---s----~~~~lsllliv~G  255 (449)
                      .+.+.+...+..|++..+++.....+++++++|.+.-+. .++-++..++..++++|-.   +    ....++++++++|
T Consensus        68 ~~~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliG  147 (345)
T PRK13499         68 FSGSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIG  147 (345)
T ss_pred             cCHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHH
Confidence            355677778888999999999999999999999987775 4778999999999998744   2    3467888999999


Q ss_pred             hhhhcc----ccc--------ccc-HHHHHHHHHHHHHHHHHHHHHHhhh--------cCCChHHHHH---HHHHHHHHH
Q 013132          256 VSMASL----TEL--------SFN-WTGFISAMISNIAFTYRSIYSKKAM--------TGMDSTNVYA---YTSIIALLF  311 (449)
Q Consensus       256 v~L~~~----~e~--------~f~-~~G~l~~l~s~l~~a~~~V~~kk~~--------~~~~~~~l~~---~~s~~s~l~  311 (449)
                      +++.+.    .|.        ++| ..|++.++++.+.++.++......+        .+.++.....   .....+.++
T Consensus       148 i~l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~  227 (345)
T PRK13499        148 VAIVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAI  227 (345)
T ss_pred             HHHHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHH
Confidence            998876    332        123 5799999999999999994332211        1344432221   111233332


Q ss_pred             HHHHHHHh---hchhhhhhhHHHHH-hhhchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhHH----HHHhhhhHHHHH
Q 013132          312 CIPPAVLI---EGPQLMQYGFKAAI-AKVGLFKFLSDLFWIGMFYHLYNQLATNTLERVAPLTH----AVGNVLKRVFVI  383 (449)
Q Consensus       312 Llp~al~~---e~~~~~~~~~~~~~-~~~~~~~~~~~l~~~gv~~~~~~~~~~~~l~~isp~t~----Si~~~lk~v~~i  383 (449)
                      .-......   .+.....  ..+.- +...+..-.....+.|+..+..+....+.-++.+..+.    .+...+.-+++.
T Consensus       228 ~n~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~Viist  305 (345)
T PRK13499        228 TNLGFCFIRLAKNKDLSL--KADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGN  305 (345)
T ss_pred             HHHHHHHHHHhhCCCccc--chhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHH
Confidence            22111111   1111000  00000 00001112222345566666666655555555533322    233355668888


Q ss_pred             HHHHHhhCccch--h-----HHHHHHHHHhhhhhh
Q 013132          384 GFSIVVFGNYFT--A-----SFHDLCADIHPEFCS  411 (449)
Q Consensus       384 l~sillfge~ls--~-----~~iGg~lil~Gv~ly  411 (449)
                      +.|+ +++|.=+  .     ..+|.++++.|..+.
T Consensus       306 lwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~li  339 (345)
T PRK13499        306 LWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIV  339 (345)
T ss_pred             Hhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHH
Confidence            8888 5998644  1     256778888887654

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.69  E-value=0.001  Score=57.97  Aligned_cols=119  Identities=12%  Similarity=0.012  Sum_probs=75.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHHHHHH
Q 013132          269 TGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWI  348 (449)
Q Consensus       269 ~G~l~~l~s~l~~a~~~V~~kk~~~~~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~  348 (449)
                      .|+++.+.+.++.+..+++.|+.+++....+.... ..       ........|               ...++..++..
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~~-~~-------~~~~~~~~p---------------~~~i~lgl~~~   58 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPLLSHAWD-FI-------AALLAFGLA---------------LRAVLLGLAGY   58 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCCccchhH-HH-------HHHHHHhcc---------------HHHHHHHHHHH
Confidence            47899999999999999999998876554332211 00       000000001               00133333444


Q ss_pred             HHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHH--hhCccchh-HHHHHHHHHhhhhhhhhh
Q 013132          349 GMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIV--VFGNYFTA-SFHDLCADIHPEFCSNIR  414 (449)
Q Consensus       349 gv~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sil--lfge~ls~-~~iGg~lil~Gv~ly~~~  414 (449)
                      ++.++.++    ..+++.+.....-.-.+..+.+.+.++.  +|||++|+ +.+|.++++.|+++.++.
T Consensus        59 ~la~~~w~----~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~  123 (129)
T PRK02971         59 ALSMLCWL----KALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP  123 (129)
T ss_pred             HHHHHHHH----HHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence            44444443    3677777766654445556666666664  89999998 699999999999998764

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=97.68  E-value=0.00034  Score=69.75  Aligned_cols=63  Identities=22%  Similarity=0.378  Sum_probs=57.5

Q ss_pred             HHHHHHHHHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhc
Q 013132          198 CHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMAS  260 (449)
Q Consensus       198 ~~~~~~~~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~  260 (449)
                      .+..+..+...|+.+.|.+..+-+.+..-++.++++.+++|||++++.+.|..+++.|..+..
T Consensus        59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv  121 (300)
T PF05653_consen   59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV  121 (300)
T ss_pred             HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence            345667888899999999999999999999999999999999999999999999999997654

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=97.68  E-value=0.0022  Score=62.31  Aligned_cols=119  Identities=24%  Similarity=0.358  Sum_probs=87.0

Q ss_pred             HHHHHHHHHHhhCCchHHHHH-HHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHH-HHHHHHHHhhcccchHH
Q 013132          140 IFNILNKKVYNYFPYPYFVSV-IHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHA-LGHVMSNVSFATVAVSF  217 (449)
Q Consensus       140 ~~~i~nK~~l~~fp~P~~lt~-~r~l~~~l~lli~~~~~~~~~~~~~~~~~~~~l~~gl~~~-~~~~~~~~sL~~vsvs~  217 (449)
                      .+++.+|+.. +.+ +..... ++++........... .... .+.+...+......+++.. .++.+.+.+++..+++.
T Consensus       168 ~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~  243 (292)
T COG0697         168 LYTALVKRLS-RLG-PVTLALLLQLLLALLLLLLFFL-SGFG-APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASL  243 (292)
T ss_pred             HHHHHHHHhc-CCC-hHHHHHHHHHHHHHHHHHHHHh-cccc-ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchH
Confidence            4456777766 333 444444 455522222222222 2221 3345677888888888877 47888999999999999


Q ss_pred             HHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccc
Q 013132          218 THTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLT  262 (449)
Q Consensus       218 a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~  262 (449)
                      ...+..++|++.+++++++++|+++..+++|..++++|+.+....
T Consensus       244 ~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         244 VALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            999999999999999999999999999999999999999887543

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=97.66  E-value=0.0016  Score=66.50  Aligned_cols=134  Identities=13%  Similarity=0.087  Sum_probs=94.4

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhhhcCCC-hHHHHHHHHHHHHHHHHHHHHHh--hchhhhhhhHHHHHhhhchhHHHH
Q 013132          267 NWTGFISAMISNIAFTYRSIYSKKAMTGMD-STNVYAYTSIIALLFCIPPAVLI--EGPQLMQYGFKAAIAKVGLFKFLS  343 (449)
Q Consensus       267 ~~~G~l~~l~s~l~~a~~~V~~kk~~~~~~-~~~l~~~~s~~s~l~Llp~al~~--e~~~~~~~~~~~~~~~~~~~~~~~  343 (449)
                      ++.-..+++..-.+....+++.|..++.++ |+.+..+...++.+++.+.....  ..+...  .+         ...+.
T Consensus        47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~---------~~~~~  115 (350)
T PTZ00343         47 KWKLALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIK--SL---------KLFLK  115 (350)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC--CH---------HHHHH
Confidence            444455555556666677889999999999 99999999999877765554321  111110  00         01222


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhh
Q 013132          344 DLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCS  411 (449)
Q Consensus       344 ~l~~~gv~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly  411 (449)
                      .++..|+++...+...+..++.+++...++.....|+++++++.++++|+++. +..+.++++.|+.+.
T Consensus       116 ~llp~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~  184 (350)
T PTZ00343        116 NFLPQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALA  184 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHhe
Confidence            33445555544444445678899999999999999999999999999999998 577888888887765

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=97.48  E-value=0.0019  Score=64.09  Aligned_cols=113  Identities=11%  Similarity=0.196  Sum_probs=80.7

Q ss_pred             HHHHHHHHHhhCCchHHHHHHHHH---HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhc-ccchH
Q 013132          141 FNILNKKVYNYFPYPYFVSVIHLL---VGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCHALGHVMSNVSFA-TVAVS  216 (449)
Q Consensus       141 ~~i~nK~~l~~fp~P~~lt~~r~l---~~~l~lli~~~~~~~~~~~~~~~~~~~~l~~gl~~~~~~~~~~~sL~-~vsvs  216 (449)
                      +.+.+|.. + .+ |+..++.|..   ++.+.+.....   +.++ .+.+.....+..|+++.++..++..+.+ +.+++
T Consensus       167 ~~~~~~~~-~-~~-~~~~~~~~~~g~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~Gi~~~ia~~~y~~~~~~~~~~~  239 (290)
T TIGR00776       167 YVVVAKAF-G-VD-GLSVLLPQAIGMVIGGIIFNLGHI---LAKP-LKKYAILLNILPGLMWGIGNFFYLFSAQPKVGVA  239 (290)
T ss_pred             HHHHHHHc-C-CC-cceehhHHHHHHHHHHHHHHHHHh---cccc-hHHHHHHHHHHHHHHHHHHHHHHHHHcccccchh
Confidence            33566754 2 33 6666544543   33333322221   1122 2233333344488888888888999999 99999


Q ss_pred             HHHHHHhhHHHHHHHHHHHHcCcccChhhH----HHHHHHHhhhhhhc
Q 013132          217 FTHTIKALEPFFNAAASQFVLGHQIPLSLW----LSLAPVVIGVSMAS  260 (449)
Q Consensus       217 ~a~iiks~~Pift~lls~l~l~e~~s~~~~----lsllliv~Gv~L~~  260 (449)
                      .+.++-+.+|+...+++.+++||+.+++++    +|.+++++|+.+..
T Consensus       240 ~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~  287 (290)
T TIGR00776       240 TSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG  287 (290)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999    99999999998764

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=97.41  E-value=0.0058  Score=59.70  Aligned_cols=135  Identities=13%  Similarity=0.125  Sum_probs=96.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHHHHH
Q 013132          268 WTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFW  347 (449)
Q Consensus       268 ~~G~l~~l~s~l~~a~~~V~~kk~~~~~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~  347 (449)
                      ..|+++++.+-+.|++-..|.|-+ ++.++.++..+-.+.+...++...........    +.+.. +.+  ..+..+..
T Consensus         6 ~~Gil~~l~Ay~lwG~lp~y~kll-~~~~~~eIlahRviwS~~~~l~ll~~~r~~~~----~~~~~-~~p--~~~~~~~l   77 (293)
T COG2962           6 RKGILLALLAYLLWGLLPLYFKLL-EPLPATEILAHRVIWSFPFMLALLFLLRQWRE----LKQLL-KQP--KTLLMLAL   77 (293)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHH-ccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHH----HHHHH-hCc--HHHHHHHH
Confidence            469999999999999999998875 78999999999988888887766554422221    11111 111  22222233


Q ss_pred             HHHHHHHHHHHHH-HHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhh
Q 013132          348 IGMFYHLYNQLAT-NTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCS  411 (449)
Q Consensus       348 ~gv~~~~~~~~~~-~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly  411 (449)
                      .++. -..|+..| +....-..+..|.+-.++|.+.+++|.++++|+++. |.+..++..+|+..-
T Consensus        78 ~a~l-i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~  142 (293)
T COG2962          78 TALL-IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQ  142 (293)
T ss_pred             HHHH-HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence            3322 22344333 377777889999999999999999999999999997 788777777787654

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.35  E-value=0.0015  Score=56.96  Aligned_cols=66  Identities=17%  Similarity=0.114  Sum_probs=58.4

Q ss_pred             HHHHHHHHHHHHhhcccchHHHHHHHhhHHHHHHHHHHH--HcCcccChhhHHHHHHHHhhhhhhccc
Q 013132          197 FCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQF--VLGHQIPLSLWLSLAPVVIGVSMASLT  262 (449)
Q Consensus       197 l~~~~~~~~~~~sL~~vsvs~a~iiks~~Pift~lls~l--~l~e~~s~~~~lsllliv~Gv~L~~~~  262 (449)
                      +++.+..++.+.+++..+++.+..+-+..++++.+.++.  ++||++++.+++|+.++++|+.+....
T Consensus        56 ~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~  123 (129)
T PRK02971         56 AGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP  123 (129)
T ss_pred             HHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence            445667888999999999999999999999888888885  899999999999999999999987643

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=97.14  E-value=0.01  Score=56.89  Aligned_cols=116  Identities=20%  Similarity=0.222  Sum_probs=82.4

Q ss_pred             HHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHhhcccchHHHH
Q 013132          141 FNILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPINKELLVILTPVAFCH-ALGHVMSNVSFATVAVSFTH  219 (449)
Q Consensus       141 ~~i~nK~~l~~fp~P~~lt~~r~l~~~l~lli~~~~~~~~~~~~~~~~~~~~l~~gl~~-~~~~~~~~~sL~~vsvs~a~  219 (449)
                      |-+..|.+-+.-|-+ .-...-|+++.++.++.-...-. ..-.+.+....-+.++++. .+.+.+..+++...+...+.
T Consensus       163 YIv~G~r~g~~~~g~-~g~a~gm~vAaviv~Pig~~~ag-~~l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~  240 (292)
T COG5006         163 YIVLGQRAGRAEHGT-AGVAVGMLVAALIVLPIGAAQAG-PALFSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFG  240 (292)
T ss_pred             HHHHcchhcccCCCc-hHHHHHHHHHHHHHhhhhhhhcc-hhhcChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHH
Confidence            335566665444423 34445777777776655432211 1112344445555666654 34678899999999999999


Q ss_pred             HHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhh
Q 013132          220 TIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSM  258 (449)
Q Consensus       220 iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L  258 (449)
                      ++.+++|.+.++.+.+++||+++..+|+++..++.+.+=
T Consensus       241 ~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG  279 (292)
T COG5006         241 TLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAG  279 (292)
T ss_pred             HHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999998887753

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=97.08  E-value=0.00012  Score=69.54  Aligned_cols=212  Identities=13%  Similarity=0.115  Sum_probs=137.3

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHh-hHHHHHHHHHHHHcCcccChhh----HHHHHHHHhh
Q 013132          181 RAPINKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKA-LEPFFNAAASQFVLGHQIPLSL----WLSLAPVVIG  255 (449)
Q Consensus       181 ~~~~~~~~~~~~l~~gl~~~~~~~~~~~sL~~vsvs~a~iiks-~~Pift~lls~l~l~e~~s~~~----~lsllliv~G  255 (449)
                      .+.++.+.+..-+.-|++...+....+.|++++++|-+.-+.+ ++-+-+-+++.+.++|-.+..+    .+++++++.|
T Consensus        51 ~p~~T~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG  130 (288)
T COG4975          51 SPELTLTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIG  130 (288)
T ss_pred             cCccchhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHh
Confidence            3456777777777888899999999999999999998876654 6678889999999999877543    4678899999


Q ss_pred             hhhhcccccc--------ccHHHHHHHHHHHHHHHHHHHHHHhhhcCCChHHH---HHHHHHHHHHHHHHHHHHhhchhh
Q 013132          256 VSMASLTELS--------FNWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNV---YAYTSIIALLFCIPPAVLIEGPQL  324 (449)
Q Consensus       256 v~L~~~~e~~--------f~~~G~l~~l~s~l~~a~~~V~~kk~~~~~~~~~l---~~~~s~~s~l~Llp~al~~e~~~~  324 (449)
                      +.+.+..|.+        ..-.|+...+.|.+.|..|.+..+...  .|.++.   ++..+..+.+.+.   ..-+....
T Consensus       131 ~~lTs~~~~~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~--v~g~saiLPqAiGMv~~ali~~---~~~~~~~~  205 (288)
T COG4975         131 IYLTSKQDRNNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLFD--VDGLSAILPQAIGMVIGALILG---FFKMEKRF  205 (288)
T ss_pred             heEeeeeccccccccChHhhhhheeeeeeeccceeeeEeeecccc--ccchhhhhHHHHHHHHHHHHHh---hcccccch
Confidence            9999876631        124688888899999999988877653  444443   3333333333221   11111211


Q ss_pred             hhhhHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-H----HH
Q 013132          325 MQYGFKAAIAKVGLFKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-S----FH  399 (449)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~----~i  399 (449)
                      .++         .+.+.     ..|+....-|...+...++.+-.|.=...-+--+++.+-++++++|+=|. +    .+
T Consensus       206 ~K~---------t~~ni-----i~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~i  271 (288)
T COG4975         206 NKY---------TWLNI-----IPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVII  271 (288)
T ss_pred             HHH---------HHHHH-----hhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhh
Confidence            111         11122     23333333344334444555544432233356778888999999998774 2    45


Q ss_pred             HHHHHHhhhhhh
Q 013132          400 DLCADIHPEFCS  411 (449)
Q Consensus       400 Gg~lil~Gv~ly  411 (449)
                      |.++++.|..+.
T Consensus       272 Giilivvgai~l  283 (288)
T COG4975         272 GIILIVVGAILL  283 (288)
T ss_pred             hHHHHHHHhhhh
Confidence            777777776554

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.00  E-value=0.0054  Score=52.74  Aligned_cols=69  Identities=12%  Similarity=0.184  Sum_probs=58.9

Q ss_pred             HHHHHHHHHHHHHHHHhhcccchHHHHHHH-hhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhcc
Q 013132          193 TPVAFCHALGHVMSNVSFATVAVSFTHTIK-ALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASL  261 (449)
Q Consensus       193 l~~gl~~~~~~~~~~~sL~~vsvs~a~iik-s~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~  261 (449)
                      ...-+++....++...++++++++.+..+- ..--+.+++.+.+++||++++.+++++.++++|+++.-.
T Consensus        34 ~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l  103 (120)
T PRK10452         34 ILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKS  103 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhc
Confidence            344455666778888999999999998885 577899999999999999999999999999999987743

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=96.92  E-value=0.023  Score=48.07  Aligned_cols=55  Identities=11%  Similarity=0.000  Sum_probs=45.9

Q ss_pred             HHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhhhh
Q 013132          359 ATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSNIR  414 (449)
Q Consensus       359 ~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~~~  414 (449)
                      .+..++..++ ..+....+.|+++.+++.++|+|+++. +.+|.++++.|+.+....
T Consensus        52 ~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~  107 (113)
T PF13536_consen   52 FFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWS  107 (113)
T ss_pred             HHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhh
Confidence            3346677775 666777799999999999999999998 588999999999988665

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=96.92  E-value=0.01  Score=50.34  Aligned_cols=66  Identities=14%  Similarity=0.200  Sum_probs=56.5

Q ss_pred             HHHHHHHHHHHHHhhcccchHHHHHHHh-hHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhcc
Q 013132          196 AFCHALGHVMSNVSFATVAVSFTHTIKA-LEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASL  261 (449)
Q Consensus       196 gl~~~~~~~~~~~sL~~vsvs~a~iiks-~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~  261 (449)
                      -+++.+...+...+++++|++.+..+-+ .--+.+++.+++++||++++.+++++.++++|+++.-.
T Consensus        37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            3445566677788999999999988865 67888999999999999999999999999999988743

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=96.84  E-value=0.022  Score=48.08  Aligned_cols=67  Identities=12%  Similarity=0.142  Sum_probs=56.0

Q ss_pred             HHHHHHHHHHHHHHHHhhcccchHHHHHHHh-hHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhh
Q 013132          193 TPVAFCHALGHVMSNVSFATVAVSFTHTIKA-LEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMA  259 (449)
Q Consensus       193 l~~gl~~~~~~~~~~~sL~~vsvs~a~iiks-~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~  259 (449)
                      ...-+++....++-..+++++|++.+-.+-+ .--+.+++.+++++||++++.+++++.++++|+++.
T Consensus        39 ~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         39 ILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            3334455566777778999999999977755 567889999999999999999999999999999865

>PRK11431 multidrug efflux system protein; Provisional

Probab=96.83  E-value=0.014  Score=48.94  Aligned_cols=66  Identities=15%  Similarity=0.126  Sum_probs=56.4

Q ss_pred             HHHHHHHHHHHHHHHhhcccchHHHHHHHh-hHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhh
Q 013132          194 PVAFCHALGHVMSNVSFATVAVSFTHTIKA-LEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMA  259 (449)
Q Consensus       194 ~~gl~~~~~~~~~~~sL~~vsvs~a~iiks-~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~  259 (449)
                      ..-+++....++-..+++++|++.+..+-+ .--+.+++.+++++||++++.+++++.++++|++..
T Consensus        34 ~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l  100 (105)
T PRK11431         34 ITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGL  100 (105)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhh
Confidence            334455666777788999999999987765 668889999999999999999999999999999876

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=96.49  E-value=0.0061  Score=60.23  Aligned_cols=63  Identities=19%  Similarity=0.283  Sum_probs=56.8

Q ss_pred             HHHHHHHHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhcc
Q 013132          199 HALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASL  261 (449)
Q Consensus       199 ~~~~~~~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~  261 (449)
                      +..+-.+++.|+.+.|.+..+-+.++.-++.++++..+++|++++...+|..+.++|-.+.+.
T Consensus        74 m~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~  136 (335)
T KOG2922|consen   74 MIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVI  136 (335)
T ss_pred             HHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEE
Confidence            445678888999999999999999999999999999999999999999999999999877653

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=96.49  E-value=0.022  Score=47.61  Aligned_cols=66  Identities=17%  Similarity=0.204  Sum_probs=55.1

Q ss_pred             HHHHHHHHHHHHHHhhcccchHHHHHHHh-hHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhc
Q 013132          195 VAFCHALGHVMSNVSFATVAVSFTHTIKA-LEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMAS  260 (449)
Q Consensus       195 ~gl~~~~~~~~~~~sL~~vsvs~a~iiks-~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~  260 (449)
                      .-+++.....+...++++++++.+-.+-+ .--+.+++.+++++||+.+..+++++.++++|++..-
T Consensus        36 ~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk  102 (106)
T COG2076          36 TIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLK  102 (106)
T ss_pred             HHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhh
Confidence            33445556677778999999999877754 5578899999999999999999999999999998653

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=96.15  E-value=0.13  Score=51.25  Aligned_cols=131  Identities=16%  Similarity=0.301  Sum_probs=90.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhhCC-chHHHHHHHHHHHHHHHHHHHHh---CCCCC-CC---CCHHHHHHHHHHHHHHHHHH
Q 013132          132 FMWYFLNVIFNILNKKVYNYFP-YPYFVSVIHLLVGVVYCLVSWTV---GLPQR-AP---INKELLVILTPVAFCHALGH  203 (449)
Q Consensus       132 ~~w~~~s~~~~i~nK~~l~~fp-~P~~lt~~r~l~~~l~lli~~~~---~~~~~-~~---~~~~~~~~~l~~gl~~~~~~  203 (449)
                      .+..++......+.|+++++.+ .++-......+.+.++..+....   +.... .+   -.++.+..++..++....+.
T Consensus       160 ~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~~g~  239 (303)
T PF08449_consen  160 LLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGALGQ  239 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence            3333555566678898887643 35666666666666655433222   21110 00   01234566666667777777


Q ss_pred             HHHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccc
Q 013132          204 VMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLT  262 (449)
Q Consensus       204 ~~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~  262 (449)
                      .+.+.-.+..++-...++..+--+++.+++.+++++++++.+|.|+++++.|..+-...
T Consensus       240 ~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~  298 (303)
T PF08449_consen  240 FFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYA  298 (303)
T ss_pred             HHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHh
Confidence            66666778888888889999999999999999999999999999999999999876543

; GO: 0055085 transmembrane transport

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=96.01  E-value=0.28  Score=43.22  Aligned_cols=115  Identities=15%  Similarity=0.119  Sum_probs=79.9

Q ss_pred             HHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHH
Q 013132          143 ILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLP-QRAPINKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTI  221 (449)
Q Consensus       143 i~nK~~l~~fp~P~~lt~~r~l~~~l~lli~~~~~~~-~~~~~~~~~~~~~l~~gl~~~~~~~~~~~sL~~vsvs~a~ii  221 (449)
                      .+|-.+-+....|+.-+++-+..|.+.+.+.+....+ .........|+.+ ..|++......+...+...++++.+..+
T Consensus        18 ~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~~-lGG~lG~~~V~~~~~~vp~lG~~~~~~l   96 (138)
T PF04657_consen   18 AFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWAY-LGGLLGVFFVLSNIILVPRLGAALTTIL   96 (138)
T ss_pred             HHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHHh-ccHHHHHHHHHHHHHHhhhhhHHHHHHH
Confidence            4555555555558999999999999877655443322 2222222233333 3778877777888889999998887766


Q ss_pred             H-hhHHHHHHHHHHH----HcCcccChhhHHHHHHHHhhhhh
Q 013132          222 K-ALEPFFNAAASQF----VLGHQIPLSLWLSLAPVVIGVSM  258 (449)
Q Consensus       222 k-s~~Pift~lls~l----~l~e~~s~~~~lsllliv~Gv~L  258 (449)
                      . ..+-+..+++..+    .-++++++++++|+.+++.|+.+
T Consensus        97 ~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   97 IVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            4 4567777777775    35678999999999999999864

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=95.96  E-value=0.05  Score=44.57  Aligned_cols=55  Identities=16%  Similarity=0.291  Sum_probs=33.2

Q ss_pred             HHHHHHHHHHHhhcccchHHHHHHH-hhHHHHHHHHHHHHcCcccChhhHHHHHHH
Q 013132          198 CHALGHVMSNVSFATVAVSFTHTIK-ALEPFFNAAASQFVLGHQIPLSLWLSLAPV  252 (449)
Q Consensus       198 ~~~~~~~~~~~sL~~vsvs~a~iik-s~~Pift~lls~l~l~e~~s~~~~lsllli  252 (449)
                      ++.....+...++++++++.+..+- ....+.+.+.+.+++||++++.+++++.++
T Consensus        38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            5666778888999999999997665 588999999999999999999999998764

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=95.86  E-value=0.074  Score=45.06  Aligned_cols=52  Identities=12%  Similarity=-0.045  Sum_probs=42.9

Q ss_pred             HHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhh
Q 013132          361 NTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSN  412 (449)
Q Consensus       361 ~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~  412 (449)
                      ..+++.+.......-.+.++.+.+.|+++|||++++ +.+|.++++.|+.+..
T Consensus        56 ~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         56 LVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            367777776655555589999999999999999998 6889999999988763

>PRK13499 rhamnose-proton symporter; Provisional

Probab=95.61  E-value=0.38  Score=48.93  Aligned_cols=143  Identities=12%  Similarity=0.044  Sum_probs=84.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHH--HHHHHHH-hhchhhhhhhHHHHHhhhchhHHHHH
Q 013132          268 WTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLF--CIPPAVL-IEGPQLMQYGFKAAIAKVGLFKFLSD  344 (449)
Q Consensus       268 ~~G~l~~l~s~l~~a~~~V~~kk~~~~~~~~~l~~~~s~~s~l~--Llp~al~-~e~~~~~~~~~~~~~~~~~~~~~~~~  344 (449)
                      ..|+++++++.+|++...+-.||. + .-+++.+ |. ..+.+.  +.|+..- ...+.     +.+.+.+.+.. .+..
T Consensus         6 ~~G~~~~~i~~~~~GS~~~p~K~~-k-~w~wE~~-W~-v~gi~~wl~~~~~~g~~~~~~-----f~~~~~~~~~~-~~~~   75 (345)
T PRK13499          6 ILGIIWHLIGGASSGSFYAPFKKV-K-KWSWETM-WS-VGGIFSWLILPWLIAALLLPD-----FWAYYSSFSGS-TLLP   75 (345)
T ss_pred             HHHHHHHHHHHHHhhccccccccc-C-CCchhHH-HH-HHHHHHHHHHHHHHHHHHhhh-----HHHHHHhcCHH-HHHH
Confidence            579999999999999999888883 3 3344444 43 222211  2222111 11122     22223333332 2223


Q ss_pred             HHHHHHHHHHHHHHHHHHhhccCh-hHHHHHhhhhHHHHHHHHHHhhCccc---hh-----HHHHHHHHHhhhhhhhhhh
Q 013132          345 LFWIGMFYHLYNQLATNTLERVAP-LTHAVGNVLKRVFVIGFSIVVFGNYF---TA-----SFHDLCADIHPEFCSNIRF  415 (449)
Q Consensus       345 l~~~gv~~~~~~~~~~~~l~~isp-~t~Si~~~lk~v~~il~sillfge~l---s~-----~~iGg~lil~Gv~ly~~~~  415 (449)
                      -+++|++.-.-|...+..+++++- .+..+..-+.-+.+.+++.+++||--   +.     ..+|.++++.|+.+..+..
T Consensus        76 ~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag  155 (345)
T PRK13499         76 VFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAG  155 (345)
T ss_pred             HHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence            345555554445544555666653 34566666788899999999999644   32     2568889999999998864


Q ss_pred             hhhhh
Q 013132          416 SWQAQ  420 (449)
Q Consensus       416 ~~q~~  420 (449)
                      .++++
T Consensus       156 ~~k~~  160 (345)
T PRK13499        156 QLKER  160 (345)
T ss_pred             hhccc
Confidence            43333

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=95.60  E-value=0.036  Score=47.08  Aligned_cols=70  Identities=20%  Similarity=0.340  Sum_probs=57.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccchHHHHHH-HhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhh
Q 013132          189 LVILTPVAFCHALGHVMSNVSFATVAVSFTHTI-KALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMA  259 (449)
Q Consensus       189 ~~~~l~~gl~~~~~~~~~~~sL~~vsvs~a~ii-ks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~  259 (449)
                      |+..+|..+ +-.+...++..++..+.|.+.-+ ++++=+||++.++++.+|..+++.++|+.+++.|+.+.
T Consensus        42 ~~y~ipf~l-Nq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   42 PKYIIPFLL-NQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHHHHHHHH-HHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            555566554 34456777788999999999888 58999999999998888888999999999999999875

Many members are annotated as potential transmembrane proteins.

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=95.55  E-value=0.15  Score=43.12  Aligned_cols=53  Identities=15%  Similarity=0.068  Sum_probs=42.9

Q ss_pred             HhhccChh-HHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhhhh
Q 013132          362 TLERVAPL-THAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSNIR  414 (449)
Q Consensus       362 ~l~~isp~-t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~~~  414 (449)
                      .++++.-. .+++..-+-.+.+.+.|+++|||++++ +.+|.++++.|+...|..
T Consensus        50 al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~  104 (110)
T PRK09541         50 TLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL  104 (110)
T ss_pred             HHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            45555433 357777778889999999999999998 689999999999998653

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=95.54  E-value=0.2  Score=43.07  Aligned_cols=53  Identities=13%  Similarity=0.199  Sum_probs=42.5

Q ss_pred             HhhccCh-hHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhhhh
Q 013132          362 TLERVAP-LTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSNIR  414 (449)
Q Consensus       362 ~l~~isp-~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~~~  414 (449)
                      .++++.- ..+++..-+--+.+.+.|+++|||++|+ +.+|.++++.|+...|..
T Consensus        50 al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~  104 (120)
T PRK10452         50 AVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG  104 (120)
T ss_pred             HHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence            4555543 3357776678889999999999999998 689999999999988654

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=95.53  E-value=0.067  Score=51.82  Aligned_cols=70  Identities=19%  Similarity=0.212  Sum_probs=64.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhhhh
Q 013132          345 LFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSNIR  414 (449)
Q Consensus       345 l~~~gv~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~~~  414 (449)
                      +..-++++..+|...|..++.++|.++.+....|.+++.++++++++.+++. |+++..+..+|+.+.+..
T Consensus        20 ~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~   90 (244)
T PF04142_consen   20 LAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLS   90 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecC
Confidence            4566788889999999999999999999999999999999999999999997 799999999999988765

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=95.46  E-value=0.43  Score=40.33  Aligned_cols=51  Identities=8%  Similarity=0.088  Sum_probs=42.6

Q ss_pred             HhhccCh-hHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhh
Q 013132          362 TLERVAP-LTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSN  412 (449)
Q Consensus       362 ~l~~isp-~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~  412 (449)
                      .++++.- +.+++..-+-.+.+.+.++++|||++++ +.+|.++++.|+...|
T Consensus        55 al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         55 AVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            4556554 3468888888999999999999999998 6899999999998765

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=95.39  E-value=0.53  Score=41.50  Aligned_cols=129  Identities=9%  Similarity=0.126  Sum_probs=85.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCCC-hHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHHHHHHH
Q 013132          271 FISAMISNIAFTYRSIYSKKAMTGMD-STNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIG  349 (449)
Q Consensus       271 ~l~~l~s~l~~a~~~V~~kk~~~~~~-~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~g  349 (449)
                      +++++++-..-+.+..+..++-+..+ ++.-.......+++.+....++.+.+....      ..+.+|. .    ...|
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~------~~~~p~w-~----~lGG   71 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRPSLAS------LSSVPWW-A----YLGG   71 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhcccccch------hccCChH-H----hccH
Confidence            46777888888888888888877765 888888888899888888877665442211      2223331 1    2345


Q ss_pred             HHHHHHHHHHHHHhhccChhHHHHHhhhh-HHHHHHHHHH-hhC---ccchh-HHHHHHHHHhhhhh
Q 013132          350 MFYHLYNQLATNTLERVAPLTHAVGNVLK-RVFVIGFSIV-VFG---NYFTA-SFHDLCADIHPEFC  410 (449)
Q Consensus       350 v~~~~~~~~~~~~l~~isp~t~Si~~~lk-~v~~il~sil-lfg---e~ls~-~~iGg~lil~Gv~l  410 (449)
                      ++...+-.+....++++++.+.......- -+.+.+++.+ +|+   +++++ ..+|.++++.|+++
T Consensus        72 ~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   72 LLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            55544444455678999998876655443 3444556665 343   46776 58899999999864

>PRK11431 multidrug efflux system protein; Provisional

Probab=95.32  E-value=0.21  Score=41.95  Aligned_cols=52  Identities=13%  Similarity=0.052  Sum_probs=43.4

Q ss_pred             HhhccCh-hHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhhh
Q 013132          362 TLERVAP-LTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSNI  413 (449)
Q Consensus       362 ~l~~isp-~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~~  413 (449)
                      .+++++- +.+++..-+-.+.+.+.|+++|||++++ +.+|.++++.|+...|.
T Consensus        49 al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         49 AMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence            4555544 4478888899999999999999999998 58899999999988753

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=95.30  E-value=0.27  Score=41.19  Aligned_cols=52  Identities=12%  Similarity=0.123  Sum_probs=43.7

Q ss_pred             HhhccCh-hHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhhh
Q 013132          362 TLERVAP-LTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSNI  413 (449)
Q Consensus       362 ~l~~isp-~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~~  413 (449)
                      .++++.- +.+++..-+-.+.+.+.|+++|||++++ +.+|..+++.|+...|.
T Consensus        50 alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~  103 (106)
T COG2076          50 ALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL  103 (106)
T ss_pred             HHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence            4566543 4468888889999999999999999998 69999999999988764

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=94.98  E-value=0.026  Score=54.54  Aligned_cols=75  Identities=9%  Similarity=0.112  Sum_probs=65.7

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhh
Q 013132          185 NKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMA  259 (449)
Q Consensus       185 ~~~~~~~~l~~gl~~~~~~~~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~  259 (449)
                      ..++|.....+|++..++..+-.+++|.=-++-.++.+.+.-+|.++...+++|+.++++.|.|++.++...+.+
T Consensus       249 cgkdr~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~  323 (346)
T KOG4510|consen  249 CGKDRWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWV  323 (346)
T ss_pred             cccceEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHH
Confidence            556777788999999999999999999877777889999999999999999999999999999988877766554

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=94.78  E-value=0.6  Score=47.32  Aligned_cols=58  Identities=16%  Similarity=0.293  Sum_probs=49.4

Q ss_pred             HHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccc
Q 013132          205 MSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLT  262 (449)
Q Consensus       205 ~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~  262 (449)
                      +....++..++.+..+-..++.++.++++.+++|+++++.-++|.++++.|.++....
T Consensus       249 l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~  306 (334)
T PF06027_consen  249 LVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLA  306 (334)
T ss_pred             HHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEcc
Confidence            4455677777777777777889999999999999999999999999999999987654

Some of the sequences in this family are annotated as putative membrane proteins.

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=94.55  E-value=1  Score=44.18  Aligned_cols=73  Identities=16%  Similarity=0.210  Sum_probs=58.8

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhH----HHHHHHHhhhhh
Q 013132          185 NKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLW----LSLAPVVIGVSM  258 (449)
Q Consensus       185 ~~~~~~~~l~~gl~~~~~~~~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~----lsllliv~Gv~L  258 (449)
                      +++.|+. +..|+++.+++.+...|.+.++++.+-.+..+..+...+.+.+++||+=+++++    +++++++.|.++
T Consensus       192 ~k~~~~n-il~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  192 EKKSWKN-ILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             ccchHHh-hHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence            3445554 567788888999999999999999999999999999999999999999886644    556666666543

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>TIGR00803 nst UDP-galactose transporter

Probab=94.55  E-value=0.35  Score=45.73  Aligned_cols=65  Identities=14%  Similarity=0.121  Sum_probs=56.7

Q ss_pred             HHHHHHHHHHHHHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhh
Q 013132          194 PVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSM  258 (449)
Q Consensus       194 ~~gl~~~~~~~~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L  258 (449)
                      ...+..+++..+..+.++|.+.....+..++.++++.+++.++++|+++...++|..++++|+.+
T Consensus       157 ~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       157 IVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            34455566667778889999999999999999999999999999999999999999999998764

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=93.29  E-value=3.4  Score=41.81  Aligned_cols=67  Identities=18%  Similarity=0.136  Sum_probs=59.6

Q ss_pred             HHHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhh
Q 013132          346 FWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSN  412 (449)
Q Consensus       346 ~~~gv~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~  412 (449)
                      ..-++.|..+|...|..+...+|.|+.+...+|...+.++++++++++++. |+...++...|+.+.+
T Consensus        96 ~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ  163 (345)
T KOG2234|consen   96 SVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQ  163 (345)
T ss_pred             HHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh
Confidence            344567788888888899999999999999999999999999999999998 6777888888998887

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=91.15  E-value=8.1  Score=34.52  Aligned_cols=117  Identities=17%  Similarity=0.158  Sum_probs=70.8

Q ss_pred             HHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHH
Q 013132          143 ILNKKVYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPQRAPIN--KELLVILTPVAFCHALGHVMSNVSFATVAVSFTHT  220 (449)
Q Consensus       143 i~nK~~l~~fp~P~~lt~~r~l~~~l~lli~~~~~~~~~~~~~--~~~~~~~l~~gl~~~~~~~~~~~sL~~vsvs~a~i  220 (449)
                      -.|-.+-.....|..-+++.+.+|.+.+.+....+. ++++..  .+..+.....|++.+.....+......+++..+.+
T Consensus        22 ~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~-~~~~~a~~~~~pwW~~~GG~lGa~~vt~s~~l~p~lGa~~t~~  100 (150)
T COG3238          22 AINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQ-GHPGLAAVASAPWWAWIGGLLGAIFVTSSILLAPRLGAATTIA  100 (150)
T ss_pred             HHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhc-CCCchhhccCCchHHHHccchhhhhhhhhHHhccchhHHHHHH
Confidence            345555455556999999999999887654433322 222221  22122233444555554444555566776666654


Q ss_pred             H-HhhHHHHHHHHHHHHc----CcccChhhHHHHHHHHhhhhhhc
Q 013132          221 I-KALEPFFNAAASQFVL----GHQIPLSLWLSLAPVVIGVSMAS  260 (449)
Q Consensus       221 i-ks~~Pift~lls~l~l----~e~~s~~~~lsllliv~Gv~L~~  260 (449)
                      + .+.+-+..++...+=.    +++++..++++++++++|+.+..
T Consensus       101 l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~  145 (150)
T COG3238         101 LVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR  145 (150)
T ss_pred             HHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence            4 4556666666665432    36789999999999999965543

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=90.74  E-value=7.1  Score=34.90  Aligned_cols=137  Identities=7%  Similarity=0.042  Sum_probs=81.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhcCCC-hHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHHHH
Q 013132          268 WTGFISAMISNIAFTYRSIYSKKAMTGMD-STNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLF  346 (449)
Q Consensus       268 ~~G~l~~l~s~l~~a~~~V~~kk~~~~~~-~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~  346 (449)
                      +...++++++..+-..++-+..++.+..+ |.--.......+++.++...++.++....+     ...+..|..     +
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a-----~~~~~pwW~-----~   73 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLA-----AVASAPWWA-----W   73 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchh-----hccCCchHH-----H
Confidence            45667788888888888888888766655 555555566677777777766554432211     122333322     2


Q ss_pred             HHHHHHHHHHHHHHHHhhccChhHHHHH-hhhhHHHHHHHHHH-hhCc---cchh-HHHHHHHHHhhhhhhhhh
Q 013132          347 WIGMFYHLYNQLATNTLERVAPLTHAVG-NVLKRVFVIGFSIV-VFGN---YFTA-SFHDLCADIHPEFCSNIR  414 (449)
Q Consensus       347 ~~gv~~~~~~~~~~~~l~~isp~t~Si~-~~lk~v~~il~sil-lfge---~ls~-~~iGg~lil~Gv~ly~~~  414 (449)
                      ..|++...+-..+.....+.++.+.-+. -.-+-+.+.+++.+ +||.   +++. ..+|.++++.|+++.+++
T Consensus        74 ~GG~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~  147 (150)
T COG3238          74 IGGLLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRF  147 (150)
T ss_pred             HccchhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhccc
Confidence            2334443333344456788888776443 33344444555555 3443   4665 488999999997776543

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=90.09  E-value=0.97  Score=45.44  Aligned_cols=130  Identities=13%  Similarity=0.088  Sum_probs=89.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhh----CCchHHHHHHHHHHHHHHHH-HHHHhCCCCCC------CCCHHHHHHHHHHHHH
Q 013132          130 FFFMWYFLNVIFNILNKKVYNY----FPYPYFVSVIHLLVGVVYCL-VSWTVGLPQRA------PINKELLVILTPVAFC  198 (449)
Q Consensus       130 ~~~~w~~~s~~~~i~nK~~l~~----fp~P~~lt~~r~l~~~l~ll-i~~~~~~~~~~------~~~~~~~~~~l~~gl~  198 (449)
                      +...+......-+++.|.++..    .. ++.+...+--++...++ +.+........      +.+... ...+..+++
T Consensus       167 ~a~~s~~~~al~~I~~~~ll~~~~~~~~-~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~-~~~~~~sv~  244 (316)
T KOG1441|consen  167 SAMISNLAFALRNILSKKLLTSKGESLN-SMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTF-LILLLNSVL  244 (316)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhccccccC-chHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhh-HHHHHHHHH
Confidence            3344445566667888888842    43 55555555455555555 55543322221      222222 223344466


Q ss_pred             HHHHHHHHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhcc
Q 013132          199 HALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASL  261 (449)
Q Consensus       199 ~~~~~~~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~  261 (449)
                      ....+...++.+..+++=++++.....=+++++.++++++++.++...+|..+.+.|+.+...
T Consensus       245 ~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~  307 (316)
T KOG1441|consen  245 AFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSR  307 (316)
T ss_pred             HHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHH
Confidence            556677888899999999999998888888889999999999999999999999999998764

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=88.83  E-value=1.1  Score=43.63  Aligned_cols=126  Identities=11%  Similarity=0.082  Sum_probs=72.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHHHHHHH
Q 013132          270 GFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLFWIG  349 (449)
Q Consensus       270 G~l~~l~s~l~~a~~~V~~kk~~~~~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~g  349 (449)
                      |++.+++|+++++..-+=.||.- ..|++-.+.+++....+.-+...++.+.+.+..  |          .     ++.|
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~~-~gDg~~fQw~~~~~i~~~g~~v~~~~~~p~f~p--~----------a-----mlgG   62 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKFD-TGDGFFFQWVMCSGIFLVGLVVNLILGFPPFYP--W----------A-----MLGG   62 (254)
T ss_pred             CchhHHHHHHHhcccceeeEecc-CCCcHHHHHHHHHHHHHHHHHHHHhcCCCccee--H----------H-----Hhhh
Confidence            67889999999999888888864 457777777766655555554444444443211  0          1     1223


Q ss_pred             HHHHHHHHHHHHHhhccC-hhHHHHHhhhhHHHHHHHHHH-hhCcc---ch-h-H-HHHHHHHHhhhhhhhh
Q 013132          350 MFYHLYNQLATNTLERVA-PLTHAVGNVLKRVFVIGFSIV-VFGNY---FT-A-S-FHDLCADIHPEFCSNI  413 (449)
Q Consensus       350 v~~~~~~~~~~~~l~~is-p~t~Si~~~lk~v~~il~sil-lfge~---ls-~-~-~iGg~lil~Gv~ly~~  413 (449)
                      .+...-|.+..-+++.++ ++-..+.+..+-+.+-..|-+ +||++   ++ + . .+|.+++++|..++..
T Consensus        63 ~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~f  134 (254)
T PF07857_consen   63 ALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSF  134 (254)
T ss_pred             hhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheee
Confidence            332233333333444443 223345555555556555544 67643   33 2 2 6788888889888743

The region concerned is approximately 280 residues long.

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=87.97  E-value=4.4  Score=33.00  Aligned_cols=43  Identities=19%  Similarity=0.130  Sum_probs=22.5

Q ss_pred             HhhccChhH-HHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHH
Q 013132          362 TLERVAPLT-HAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCAD  404 (449)
Q Consensus       362 ~l~~isp~t-~Si~~~lk~v~~il~sillfge~ls~-~~iGg~li  404 (449)
                      .++++.... +.+..-+-.+.+.+.|+++|||++|+ +.+|.+++
T Consensus        49 al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   49 ALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            556654333 46666678889999999999999998 57776653

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=85.40  E-value=11  Score=37.61  Aligned_cols=75  Identities=17%  Similarity=0.266  Sum_probs=59.5

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhh
Q 013132          185 NKELLVILTPVAFCHALGHVMSNVSFATVAVSFTHTIKALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMA  259 (449)
Q Consensus       185 ~~~~~~~~l~~gl~~~~~~~~~~~sL~~vsvs~a~iiks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~  259 (449)
                      .++.++-++..+++.+.+..+-+.-++.-++=..++|..+-=+++.+++.+.++.+++..+|++.+++++|+.+-
T Consensus       237 hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~  311 (327)
T KOG1581|consen  237 HPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLE  311 (327)
T ss_pred             ChhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHH
Confidence            456788888999998888777555555444444556666667889999999999999999999999999998754

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=84.89  E-value=2.1  Score=43.64  Aligned_cols=80  Identities=14%  Similarity=0.081  Sum_probs=65.1

Q ss_pred             HHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhhhhhhhhhhhcCCC
Q 013132          347 WIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSNIRFSWQAQFLRPS  425 (449)
Q Consensus       347 ~~gv~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~~~~~~q~~~~~~~  425 (449)
                      ..+...++.|+.....++.++.....+.......++..++.++-+|++|+ ..++..+.+.|+.+.+...++|+....++
T Consensus       164 ~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a~  243 (416)
T KOG2765|consen  164 FFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPAS  243 (416)
T ss_pred             HHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCCcc
Confidence            33444555666655688888888888999999999999999999999998 48899999999999988888887666666


Q ss_pred             c
Q 013132          426 S  426 (449)
Q Consensus       426 ~  426 (449)
                      +
T Consensus       244 ~  244 (416)
T KOG2765|consen  244 R  244 (416)
T ss_pred             c
Confidence            4

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=82.46  E-value=39  Score=34.29  Aligned_cols=144  Identities=15%  Similarity=0.094  Sum_probs=71.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHH-HhhchhhhhhhHHHHHhhhchhHHHHHHH
Q 013132          268 WTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAV-LIEGPQLMQYGFKAAIAKVGLFKFLSDLF  346 (449)
Q Consensus       268 ~~G~l~~l~s~l~~a~~~V~~kk~~~~~~~~~l~~~~s~~s~l~Llp~al-~~e~~~~~~~~~~~~~~~~~~~~~~~~l~  346 (449)
                      ..|+++..++.++.+.+.+=.||. |+-+-.+.-....+++.+ ++|... +.+-|...+     .+...+...+. ...
T Consensus         6 i~Gii~h~iGg~~~~sfy~P~kkv-k~WsWEs~Wlv~gi~swl-i~P~~~a~l~ip~~~~-----i~~~~~~~~l~-~~~   77 (344)
T PF06379_consen    6 ILGIIFHAIGGFASGSFYVPFKKV-KGWSWESYWLVQGIFSWL-IVPWLWALLAIPDFFS-----IYSATPASTLF-WTF   77 (344)
T ss_pred             HHHHHHHHHHHHHhhhhccchhhc-CCccHHHHHHHHHHHHHH-HHHHHHHHHhCCcHHH-----HHHhCChhHHH-HHH
Confidence            579999999999999888877876 344433333334444443 344433 234444322     12222211111 111


Q ss_pred             HHHH----HHHHHHHHHHHHhhccC-hhHHHHHhhhhHHHHHHHHHHhhCc---cch---h--HHHHHHHHHhhhhhhhh
Q 013132          347 WIGM----FYHLYNQLATNTLERVA-PLTHAVGNVLKRVFVIGFSIVVFGN---YFT---A--SFHDLCADIHPEFCSNI  413 (449)
Q Consensus       347 ~~gv----~~~~~~~~~~~~l~~is-p~t~Si~~~lk~v~~il~sillfge---~ls---~--~~iGg~lil~Gv~ly~~  413 (449)
                      +.|+    ....+..    .+++++ ++..++.--+..++..++--++.|+   -++   .  ..+|.++++.|+.+.-+
T Consensus        78 l~G~lWGIGgltfGl----~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~  153 (344)
T PF06379_consen   78 LFGVLWGIGGLTFGL----AMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGK  153 (344)
T ss_pred             HHHHHHhcchhhHhH----HHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhH
Confidence            1221    1111111    233433 3344444444445555544444331   122   1  36788999999999987


Q ss_pred             hhhhhhhhcC
Q 013132          414 RFSWQAQFLR  423 (449)
Q Consensus       414 ~~~~q~~~~~  423 (449)
                      ....++++..
T Consensus       154 AG~~Ke~~~~  163 (344)
T PF06379_consen  154 AGSMKEKELG  163 (344)
T ss_pred             HHHhhhhhhc
Confidence            7554444433

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=80.42  E-value=12  Score=37.32  Aligned_cols=115  Identities=17%  Similarity=0.088  Sum_probs=64.0

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhHHHHHhhhchhHHHHHHH
Q 013132          267 NWTGFISAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVLIEGPQLMQYGFKAAIAKVGLFKFLSDLF  346 (449)
Q Consensus       267 ~~~G~l~~l~s~l~~a~~~V~~kk~~~~~~~~~l~~~~s~~s~l~Llp~al~~e~~~~~~~~~~~~~~~~~~~~~~~~l~  346 (449)
                      +..|..++++++++.+....++|+...+.+....-.-...        ...+. .+                 .++.+++
T Consensus         5 ~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~~~~--------~~~l~-~~-----------------~W~~G~~   58 (300)
T PF05653_consen    5 FYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAGSGG--------RSYLR-RP-----------------LWWIGLL   58 (300)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccchh--------hHHHh-hH-----------------HHHHHHH
Confidence            4689999999999999999999986543221000000000        00000 11                 1111111


Q ss_pred             HHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhh
Q 013132          347 WIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCS  411 (449)
Q Consensus       347 ~~gv~~~~~~~~~~~~l~~isp~t~Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly  411 (449)
                      ..++ .-..++.++   ........+-.+.+.-++..+++..+++|+++. ...|.++++.|..+.
T Consensus        59 ~~~~-g~~~~~~Al---~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~li  120 (300)
T PF05653_consen   59 LMVL-GEILNFVAL---GFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLI  120 (300)
T ss_pred             HHhc-chHHHHHHH---HhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheee
Confidence            1111 111222222   122222233334466778899999999999998 588999999997665

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	449
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.17
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.07
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	97.44
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	96.63

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.17  E-value=1.2e-05  Score=66.89  Aligned_cols=71  Identities=13%  Similarity=0.192  Sum_probs=62.2

Q ss_pred             HHHHHHHHHHHHHHHHhhcccchHHHHHH-HhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhcccc
Q 013132          193 TPVAFCHALGHVMSNVSFATVAVSFTHTI-KALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTE  263 (449)
Q Consensus       193 l~~gl~~~~~~~~~~~sL~~vsvs~a~ii-ks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~e  263 (449)
                      +...+++.....+...++++.+++.+..+ ..+.|+++++++++++||++++.+++|+.++++|+.+....+
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            33445566777888899999999999888 899999999999999999999999999999999999876543

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.07  E-value=8.1e-06  Score=70.68  Aligned_cols=69  Identities=13%  Similarity=0.197  Sum_probs=50.3

Q ss_pred             HHHHHHHHHHHHHHHhhcccchHHHHHH-HhhHHHHHHHHHHHHcCcccChhhHHHHHHHHhhhhhhccc
Q 013132          194 PVAFCHALGHVMSNVSFATVAVSFTHTI-KALEPFFNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLT  262 (449)
Q Consensus       194 ~~gl~~~~~~~~~~~sL~~vsvs~a~ii-ks~~Pift~lls~l~l~e~~s~~~~lsllliv~Gv~L~~~~  262 (449)
                      ...+++.+..++.+.++++++++.+..+ ..+.|+++++++++++||++++.+++|+.++++|+++....
T Consensus        35 l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~  104 (137)
T 2i68_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (137)
T ss_dssp             HHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            3334566778889999999999999888 89999999999999999999999999999999999987543

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=97.44  E-value=0.00026  Score=61.19  Aligned_cols=54  Identities=13%  Similarity=0.016  Sum_probs=38.1

Q ss_pred             HHhhccChhHHHHH-hhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhhhh
Q 013132          361 NTLERVAPLTHAVG-NVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSNIR  414 (449)
Q Consensus       361 ~~l~~isp~t~Si~-~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~~~  414 (449)
                      ..++++++...... ..+.|++++++|+++|||++++ +.+|+++++.|+++.+..
T Consensus        49 ~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~  104 (137)
T 2i68_A           49 QTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (137)
T ss_dssp             HHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC
T ss_pred             HHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            37888888876555 7899999999999999999998 699999999999999764

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=96.63  E-value=0.0084  Score=49.49  Aligned_cols=53  Identities=15%  Similarity=0.063  Sum_probs=44.5

Q ss_pred             HhhccChhHH-HHHhhhhHHHHHHHHHHhhCccchh-HHHHHHHHHhhhhhhhhh
Q 013132          362 TLERVAPLTH-AVGNVLKRVFVIGFSIVVFGNYFTA-SFHDLCADIHPEFCSNIR  414 (449)
Q Consensus       362 ~l~~isp~t~-Si~~~lk~v~~il~sillfge~ls~-~~iGg~lil~Gv~ly~~~  414 (449)
                      .+++.+..+. .+...+.++.+.+.++++|||++++ +.+|.++++.|+++.+..
T Consensus        50 al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           50 TLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             HHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            5677766665 4446799999999999999999998 689999999999998654

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00