Citrus Sinensis ID: 013153
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 448 | ||||||
| 224102011 | 429 | predicted protein [Populus trichocarpa] | 0.928 | 0.969 | 0.711 | 0.0 | |
| 255581180 | 432 | conserved hypothetical protein [Ricinus | 0.948 | 0.983 | 0.704 | 0.0 | |
| 225424775 | 439 | PREDICTED: uncharacterized protein LOC10 | 0.950 | 0.970 | 0.703 | 0.0 | |
| 356501459 | 440 | PREDICTED: uncharacterized protein LOC10 | 0.953 | 0.970 | 0.706 | 0.0 | |
| 356497953 | 440 | PREDICTED: uncharacterized protein LOC10 | 0.953 | 0.970 | 0.706 | 0.0 | |
| 224108125 | 425 | predicted protein [Populus trichocarpa] | 0.919 | 0.969 | 0.675 | 1e-178 | |
| 356524073 | 431 | PREDICTED: uncharacterized protein LOC10 | 0.926 | 0.962 | 0.656 | 1e-170 | |
| 296086496 | 415 | unnamed protein product [Vitis vinifera] | 0.897 | 0.968 | 0.662 | 1e-170 | |
| 449434887 | 444 | PREDICTED: uncharacterized protein LOC10 | 0.939 | 0.948 | 0.643 | 1e-170 | |
| 357486031 | 444 | hypothetical protein MTR_5g035070 [Medic | 0.957 | 0.966 | 0.678 | 1e-169 |
| >gi|224102011|ref|XP_002312510.1| predicted protein [Populus trichocarpa] gi|222852330|gb|EEE89877.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 665 bits (1716), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/440 (71%), Positives = 364/440 (82%), Gaps = 24/440 (5%)
Query: 9 PHSIAKKLLPWTFYAVLSVAIFRLYLYPLHLYFHSASDQLPHTKSLIITSSSSASSSTSS 68
P S+AKKL+PWTFYA++ + +FRLY YP L+ + + I+TSSSS+ SS++
Sbjct: 14 PFSLAKKLIPWTFYAMIPLVLFRLYFYPYPLH---------NITTPILTSSSSSVSSSTP 64
Query: 69 LSLTSSSLAQEKERADHDDETPCDYTIGKWVHDKMGPLYNGTTCGTIKEGQNCITHGRPD 128
+ET CDYT GKWV DK GPLYNG+ CGTIKEGQNCI HGRPD
Sbjct: 65 FVA---------------EETSCDYTTGKWVRDKRGPLYNGSACGTIKEGQNCIAHGRPD 109
Query: 129 LGYLYWRWKPRLCKLPRFDPNAFLDFLRNKHLAFVGDSMARNQLESLLCMLSTVSVPNLV 188
+GYLYWRWKP+ CKLPRF+PN FL LRNKHLAFVGDSMARNQLESLLCMLS+ S PNLV
Sbjct: 110 MGYLYWRWKPKHCKLPRFEPNTFLQLLRNKHLAFVGDSMARNQLESLLCMLSSASAPNLV 169
Query: 189 YRDGEDNKFRRWHFDAHNVTVSVYWSPFLVKGVEKSKTGPDHNKLYVDHVDERWAADLDQ 248
YRDG+DNKFRRW+F++HN+ +SVYWSPFLVKGVEKS TGP+HN+LY+DHVDERWAAD++
Sbjct: 170 YRDGDDNKFRRWYFESHNINISVYWSPFLVKGVEKSNTGPNHNQLYLDHVDERWAADMNG 229
Query: 249 IDMIVLSVGHWFLHPAVYLEGDSVLGCHYCPGLNQTEIGFYDVLRKALKTTLKTITERRG 308
IDMIVLS+GHWFLHPAVY EGD VLGCHYCPGLN TEIGFYDVLRKA+KTTLK + +R+G
Sbjct: 230 IDMIVLSIGHWFLHPAVYYEGDQVLGCHYCPGLNHTEIGFYDVLRKAIKTTLKALIDRKG 289
Query: 309 SSGDFIDVFLTTFSPSHFEGEWDKAGACPKTTPYKEGEKLLEGMDAEMRHIEVEEVELAK 368
++ + I+ F+TTFSP+HFEG+WDK GACPKT PYKEG+K LEGMDA+MR IEVEEVE AK
Sbjct: 290 ANSNGINAFVTTFSPAHFEGDWDKLGACPKTKPYKEGDKALEGMDADMRQIEVEEVEAAK 349
Query: 369 ENAKQFKGLRLEALDVTKLSLMRPDGHPGPYMYPNPFANGVQEHVQNDCVHWCLPGPIDT 428
N+ Q + RLEALDVT LSLMRPDGHPGPYM+P PFANGV E VQNDCVHWCLPGPIDT
Sbjct: 350 MNSTQLEKFRLEALDVTSLSLMRPDGHPGPYMHPFPFANGVTERVQNDCVHWCLPGPIDT 409
Query: 429 WNQILLEVIRKWQHQSRREE 448
WN+ILLEVI+KW ++SRREE
Sbjct: 410 WNEILLEVIKKWDYESRREE 429
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255581180|ref|XP_002531403.1| conserved hypothetical protein [Ricinus communis] gi|223528996|gb|EEF30987.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|225424775|ref|XP_002266929.1| PREDICTED: uncharacterized protein LOC100241586 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|356501459|ref|XP_003519542.1| PREDICTED: uncharacterized protein LOC100776316 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356497953|ref|XP_003517820.1| PREDICTED: uncharacterized protein LOC100801798 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|224108125|ref|XP_002314730.1| predicted protein [Populus trichocarpa] gi|222863770|gb|EEF00901.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|356524073|ref|XP_003530657.1| PREDICTED: uncharacterized protein LOC100775716 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|296086496|emb|CBI32085.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|449434887|ref|XP_004135227.1| PREDICTED: uncharacterized protein LOC101210982 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|357486031|ref|XP_003613303.1| hypothetical protein MTR_5g035070 [Medicago truncatula] gi|355514638|gb|AES96261.1| hypothetical protein MTR_5g035070 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 448 | ||||||
| TAIR|locus:2020628 | 416 | TBL27 "TRICHOME BIREFRINGENCE- | 0.779 | 0.838 | 0.644 | 8.8e-134 | |
| TAIR|locus:2035342 | 456 | TBL25 "AT1G01430" [Arabidopsis | 0.799 | 0.785 | 0.450 | 1.6e-86 | |
| TAIR|locus:2146062 | 526 | TBL21 "AT5G15890" [Arabidopsis | 0.752 | 0.640 | 0.446 | 6.4e-83 | |
| TAIR|locus:2125048 | 442 | TBL26 "AT4G01080" [Arabidopsis | 0.741 | 0.751 | 0.452 | 1.3e-82 | |
| TAIR|locus:2128489 | 430 | TBL24 "AT4G23790" [Arabidopsis | 0.763 | 0.795 | 0.435 | 1.1e-78 | |
| TAIR|locus:2136113 | 432 | TBL23 "AT4G11090" [Arabidopsis | 0.776 | 0.805 | 0.428 | 3.4e-77 | |
| TAIR|locus:2146077 | 426 | TBL19 "AT5G15900" [Arabidopsis | 0.763 | 0.802 | 0.418 | 1e-75 | |
| TAIR|locus:2091388 | 414 | TBL22 "AT3G28150" [Arabidopsis | 0.756 | 0.818 | 0.419 | 1.7e-75 | |
| TAIR|locus:2153077 | 501 | YLS7 "AT5G51640" [Arabidopsis | 0.787 | 0.704 | 0.381 | 2e-63 | |
| TAIR|locus:2138043 | 533 | TBL18 "AT4G25360" [Arabidopsis | 0.765 | 0.643 | 0.373 | 3.8e-62 |
| TAIR|locus:2020628 TBL27 "TRICHOME BIREFRINGENCE-LIKE 27" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1311 (466.6 bits), Expect = 8.8e-134, P = 8.8e-134
Identities = 236/366 (64%), Positives = 284/366 (77%)
Query: 78 QEKERADH-DDETPCDYTIGKWVHDKMGPLYNGTTCGTIKEGQNCITHGRPDLGYLYWRW 136
+ +E DH DE CDYT G WV D++GPLYNG+TCGTIK+GQNC HGRPD GYLYW+W
Sbjct: 65 ESQESFDHIQDEPLCDYTQGNWVRDEIGPLYNGSTCGTIKDGQNCFRHGRPDSGYLYWKW 124
Query: 137 KPRLCKLPRFDPNAFLDFLRNKHLAFVGDSMARNQLESLLCMLSTVSVPNLVYRDGEDNK 196
KP C +PRFD N FLD +R+KHLAF+GDSMARNQLESLLC+LSTVS P+LVYR+GEDNK
Sbjct: 125 KPNECDIPRFDSNRFLDLMRDKHLAFIGDSMARNQLESLLCLLSTVSSPDLVYRNGEDNK 184
Query: 197 FRRWHFDAHNVTVSVYWSPFLVKGVEKSKTGPDHNKLYVDHVDERWAADLDQIDMIVLSV 256
FRRW F++HNVTVSVYWSPFLV G+EKS DHN L++D VDERW DL++ D +V+SV
Sbjct: 185 FRRWRFESHNVTVSVYWSPFLVAGLEKSGN-LDHNVLHIDRVDERWGNDLERFDTVVVSV 243
Query: 257 GHWFLHPAVYLEGDSVLGCHYCPGLNQTEIGFYDVLRKALKTTLKTITERRGSSGDFIDV 316
GHWFLHPAVY E SVLGCH C N TE+GFYDV RKA++TTL+ + SG +V
Sbjct: 244 GHWFLHPAVYYESGSVLGCHSCETSNCTEVGFYDVFRKAIRTTLRAVA----GSGR--EV 297
Query: 317 FLTTFSPSHFEGE-WDKAGACPKTTPYKEGEKLLEGMDAEMRHIEVEEVELAKENAKQFK 375
LTTFSPSHFEG WD GAC T PY EG K+LEG+D +MR IE+EE A
Sbjct: 298 ILTTFSPSHFEGRPWDSLGACNMTKPY-EG-KVLEGLDLDMRKIEIEEYTAAAAE----- 350
Query: 376 GLRLEALDVTKLSLMRPDGHPGPYMYPNPFANGVQEHVQNDCVHWCLPGPIDTWNQILLE 435
+RLE LDVT +S++RPDGHPGPYMY +PF NGV E + NDC+HWCLPGP+DTWN+I++E
Sbjct: 351 -VRLEVLDVTAMSVLRPDGHPGPYMYADPFKNGVPERIPNDCLHWCLPGPVDTWNEIMIE 409
Query: 436 VIRKWQ 441
++R+W+
Sbjct: 410 MLRRWK 415
|
|
| TAIR|locus:2035342 TBL25 "AT1G01430" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2146062 TBL21 "AT5G15890" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2125048 TBL26 "AT4G01080" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2128489 TBL24 "AT4G23790" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2136113 TBL23 "AT4G11090" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2146077 TBL19 "AT5G15900" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2091388 TBL22 "AT3G28150" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2153077 YLS7 "AT5G51640" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2138043 TBL18 "AT4G25360" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 448 | |||
| pfam13839 | 270 | pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Estera | 8e-88 | |
| PLN02629 | 387 | PLN02629, PLN02629, powdery mildew resistance 5 | 7e-43 | |
| pfam14416 | 55 | pfam14416, PMR5N, PMR5 N terminal Domain | 2e-23 |
| >gnl|CDD|222410 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
Score = 268 bits (687), Expect = 8e-88
Identities = 117/296 (39%), Positives = 158/296 (53%), Gaps = 27/296 (9%)
Query: 143 LPRFDPNAFLDFLRNKHLAFVGDSMARNQLESLLCMLSTVSVPNLVYRDGEDNKFRRWHF 202
LPRFD FL+ LR K + FVGDS++RNQ ESL+C+LS V P + D + R+ F
Sbjct: 1 LPRFDAQQFLERLRGKRVVFVGDSLSRNQWESLVCLLSQVEPPKGKTLE-RDGRLFRFRF 59
Query: 203 DAHNVTVSVYWSPFLVKGVEKSKTGPDHNKLYVDHVDERWAADLDQIDMIVLSVGHWFLH 262
+NVT+ YWSPFLV+ + L +D +DE+W+ D++V + GHW+LH
Sbjct: 60 KDYNVTIEFYWSPFLVESDNAEEGK---RVLKLDSIDEKWSKLWPGADVLVFNSGHWWLH 116
Query: 263 PAVYLEGDSVLGCHYCPGLNQTEIGFYDVLRKALKTTLKTITERRGSSGDFIDVFLTTFS 322
VY +G YC N E+GF D RKAL+T K + S VF TFS
Sbjct: 117 RKVY------IGWDYCQKSNYKEMGFLDAYRKALETWAKWVDVNLPPSKTR--VFFRTFS 168
Query: 323 PSHFE-GEWDKAGACPKTTPYKEGEKLLEGMDAEMRHIEVEEVELAKENAKQFKGLRLEA 381
P HFE GEW+ G+C +T P E +G+ EM I E + + ++
Sbjct: 169 PVHFEGGEWNTGGSCYETEPLLGSEY--KGLTPEMIDIVNEVLS------RAAMKTPVKL 220
Query: 382 LDVTKLSLMRPDGHPGPYMYPNPFANGVQEHVQNDCVHWCLPGPIDTWNQILLEVI 437
LD+T LS R DGHP Y P P + DC+HWCLPG DTWN++LL ++
Sbjct: 221 LDITLLSQYRKDGHPSVYRKPGPP------KKEQDCLHWCLPGVPDTWNELLLALL 270
|
The PC-Esterase family is comprised of Cas1p, the Homo sapiens C7orf58, Arabidopsis thaliana PMR5 and a group of plant freezing resistance/coldacclimatization proteins typified by Arabidopsis thaliana ESKIMO1, animal FAM55D proteins, and animal FAM113 proteins. The PC-Esterase family has features that are both similar and different from the canonical GDSL/SGNH superfamily. The members of this family are predicted to have Acyl esterase activity and predicted to modify cell-surface biopolymers such as glycans and glycoproteins. The Cas1p protein has a Cas1_AcylT domain, in addition, with the opposing acyltransferase activity. The C7orf58 family has a ATP-Grasp domain fused to the PC-Esterase and is the first identified secreted tubulin-tyrosine ligase like enzyme in eukaryotes. The plant family with PMR5, ESK1, TBL3 etc have a N-terminal C rich potential sugar binding domain followed by the PC-Esterase domain. Length = 270 |
| >gnl|CDD|215338 PLN02629, PLN02629, powdery mildew resistance 5 | Back alignment and domain information |
|---|
| >gnl|CDD|206583 pfam14416, PMR5N, PMR5 N terminal Domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 448 | |||
| PLN02629 | 387 | powdery mildew resistance 5 | 100.0 | |
| PF13839 | 263 | PC-Esterase: GDSL/SGNH-like Acyl-Esterase family f | 100.0 | |
| PF14416 | 55 | PMR5N: PMR5 N terminal Domain | 99.95 | |
| cd01842 | 183 | SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG | 97.71 | |
| cd01829 | 200 | SGNH_hydrolase_peri2 SGNH_peri2; putative periplas | 88.81 |
| >PLN02629 powdery mildew resistance 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-114 Score=878.92 Aligned_cols=329 Identities=32% Similarity=0.596 Sum_probs=279.6
Q ss_pred CCCCCCcCccCceeeCCCCCCcCCCCCC-CccCCcccccCCCCCCCCceeeecCCcCCCCCCChHHHHHHHcCCcEEEEe
Q 013153 86 DDETPCDYTIGKWVHDKMGPLYNGTTCG-TIKEGQNCITHGRPDLGYLYWRWKPRLCKLPRFDPNAFLDFLRNKHLAFVG 164 (448)
Q Consensus 86 ~~~~~CD~~~G~WV~D~~~PlY~~~~Cp-~i~~~~~C~~nGRpD~~Yl~WRWQP~gC~LPrFD~~~FLe~lRgKri~FVG 164 (448)
...+.||||+|+||+|+++|+|++++|| ||+++|||++|||||++|++|||||++|+||||||.+||++||||||||||
T Consensus 48 ~~~~~CD~f~G~WV~D~s~PlY~~~~Cp~fi~~~~nC~knGRPD~~Yl~WRWqP~gC~LPRFda~~fLe~~RgKrl~FVG 127 (387)
T PLN02629 48 ANQSTCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGKTVMFVG 127 (387)
T ss_pred CCccccCCCCCeEecCCCCCCCCCCCCccccccccchhhcCCCCcchhhccccCCCCCCCCcCHHHHHHHhcCCeEEEec
Confidence 3467799999999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHhhccccCCceeeecCCCCCeeEEEEeecCeEEEEEEccccccccccCCCCCCcceeeecccchHHhh
Q 013153 165 DSMARNQLESLLCMLSTVSVPNLVYRDGEDNKFRRWHFDAHNVTVSVYWSPFLVKGVEKSKTGPDHNKLYVDHVDERWAA 244 (448)
Q Consensus 165 DSl~RNq~eSLlCLL~~~~~~~~v~~~~~~~~~~~~~F~~~n~TV~~yWsPFLV~~~~~~~~~~~~~~l~LD~~~~~w~~ 244 (448)
|||+|||||||+|||+++++........ ...+.+|+|++||+||+||||||||+.+..+ ....|+||++++ +++
T Consensus 128 DSL~RNQ~eSLvClL~~~~p~~~~~~~~-~~~~~~~~F~~yN~TV~~ywspfLV~~~~~~----~~~~l~LD~id~-~a~ 201 (387)
T PLN02629 128 DSLGRNQWESLICLISSSVPSTRTQMSR-GDPLSTFKFLDYGVSISFYKAPYLVDIDAVQ----GKRVLKLEEISG-NAN 201 (387)
T ss_pred cccchhHHHHHHHHhhccCCCCceeeec-CCceEEEEeccCCEEEEEEecceEEeeecCC----CceeEEecCcch-hhh
Confidence 9999999999999999988754322221 2357899999999999999999999986543 346899999885 589
Q ss_pred ccCCCcEEEEeccccccccceeccCCeeeccccC--CCCccccccHHHHHHHHHHHHHHHHHhhcCCCCCCceEEEEecC
Q 013153 245 DLDQIDMIVLSVGHWFLHPAVYLEGDSVLGCHYC--PGLNQTEIGFYDVLRKALKTTLKTITERRGSSGDFIDVFLTTFS 322 (448)
Q Consensus 245 ~~~~~DvlV~ntGhWw~~~~~~~e~g~~~g~~~~--~~~n~~e~~~~~ayr~alrt~~~~i~~~~~~~~~~~~VffRt~S 322 (448)
.|.++|||||||||||.+++ .++||+++ .+.++++|++.+||++||+||++|| +.+ +++.+++|||||+|
T Consensus 202 ~w~~~DvlVfntghWw~~~~------~~~~~~~~~~g~~~~~~~~~~~A~r~al~T~~~wv-~~~-~~~~kt~vffrT~S 273 (387)
T PLN02629 202 AWRDADVLIFNTGHWWSHQG------SLQGWDYIESGGTYYQDMDRLVALEKALRTWAYWV-DTN-VDRSRTRVFFQSIS 273 (387)
T ss_pred hhccCCEEEEeCccccCCCC------eeEEeeeeccCCccccCccHHHHHHHHHHHHHHHH-Hhc-CCCCCcEEEEEecC
Confidence 99999999999999999874 34566665 3467889999999999999999997 455 46789999999999
Q ss_pred CCCCC-CCCCCCC-----CCC-CcccCCCCCccccCCcHHHHHHHHHHHHHHHHhhhhccCceeEEEeccccccCCCCCC
Q 013153 323 PSHFE-GEWDKAG-----ACP-KTTPYKEGEKLLEGMDAEMRHIEVEEVELAKENAKQFKGLRLEALDVTKLSLMRPDGH 395 (448)
Q Consensus 323 P~Hfe-G~W~~gg-----~C~-~t~P~~~~e~~~~~~~~~~~~i~~ee~~~a~~~~~~~~~~~v~lLDIT~ls~~R~DgH 395 (448)
|+||| |+||+|| +|. +|+|+. ++.+.++...+|+ ++|++.++ ++.+|++||||+||+||||||
T Consensus 274 P~Hfe~g~Wn~gg~~~~~~C~~et~P~~-~~~~~~~~~~~~~--~ve~v~~~-------~~~~v~lLDIT~ls~lR~DgH 343 (387)
T PLN02629 274 PTHYNPSEWSAGASTTTKNCYGETTPMS-GMTYPGAYPDQMR--VVDEVIRG-------MHNPAYLLDITLLSELRKDGH 343 (387)
T ss_pred cccccCCCcCCCCCCCCCCCccCCccCc-CccccCcchHHHH--HHHHHHHh-------cCCceEEEechhhhhcCCCCC
Confidence 99999 6999875 575 789997 4444555556665 45666553 257999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCeecccCCCchhhHHHHHHHHHH
Q 013153 396 PGPYMYPNPFANGVQEHVQNDCVHWCLPGPIDTWNQILLEVIR 438 (448)
Q Consensus 396 ps~y~~~~~~~~g~~~~~~~DC~HWCLPG~~DtWNelL~~~L~ 438 (448)
||+|+...+.+++.....++||+||||||||||||||||++|+
T Consensus 344 Ps~Y~~~~~~~~~~~p~~~~DC~HWCLPGvpDTWNelL~a~L~ 386 (387)
T PLN02629 344 PSIYSGDLSPSQRANPDRSADCSHWCLPGLPDTWNQLFYTALF 386 (387)
T ss_pred cccccCCCchhhccCCCCCCCcccccCCCCCccHHHHHHHHHh
Confidence 9999865443322222457899999999999999999999986
|
|
| >PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
| >PF14416 PMR5N: PMR5 N terminal Domain | Back alignment and domain information |
|---|
| >cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
| >cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 448 | |||
| 4h08_A | 200 | Putative hydrolase; GDSL-like lipase/acylhydrolase | 96.82 |
| >4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=96.82 E-value=0.013 Score=52.52 Aligned_cols=52 Identities=13% Similarity=0.151 Sum_probs=35.3
Q ss_pred CCCcEEEEeccccccccceeccCCeeeccccCCCCccccccHHHHHHHHHHHHHHHHHhhcCCCCCCceEEEEecCCCCC
Q 013153 247 DQIDMIVLSVGHWFLHPAVYLEGDSVLGCHYCPGLNQTEIGFYDVLRKALKTTLKTITERRGSSGDFIDVFLTTFSPSHF 326 (448)
Q Consensus 247 ~~~DvlV~ntGhWw~~~~~~~e~g~~~g~~~~~~~n~~e~~~~~ayr~alrt~~~~i~~~~~~~~~~~~VffRt~SP~Hf 326 (448)
..+|+|||+.|..=.. . ..+.|++.|+..++.+.+. ..+++++|.+..|...
T Consensus 73 ~~pd~Vvi~~G~ND~~--------------------~----~~~~~~~~l~~ii~~l~~~----~p~~~ii~~~~~P~~~ 124 (200)
T 4h08_A 73 TKFDVIHFNNGLHGFD--------------------Y----TEEEYDKSFPKLIKIIRKY----APKAKLIWANTTPVRT 124 (200)
T ss_dssp SCCSEEEECCCSSCTT--------------------S----CHHHHHHHHHHHHHHHHHH----CTTCEEEEECCCCCEE
T ss_pred CCCCeEEEEeeeCCCC--------------------C----CHHHHHHHHHHHHHHHhhh----CCCccEEEeccCCCcc
Confidence 5689999998864110 0 1356888888888776443 3457889998888653
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 448 | |||
| d3dc7a1 | 207 | Uncharacterized protein Lp3323 {Lactobacillus plan | 96.08 | |
| d3bzwa1 | 248 | Uncharacterized protein BT2961 {Bacteroides thetai | 81.72 | |
| d1pvva2 | 163 | Ornithine transcarbamoylase {Archaeon Pyrococcus f | 81.62 |
| >d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: SGNH hydrolase family: BT2961-like domain: Uncharacterized protein Lp3323 species: Lactobacillus plantarum [TaxId: 1590]
Probab=96.08 E-value=0.017 Score=49.03 Aligned_cols=15 Identities=33% Similarity=0.530 Sum_probs=12.7
Q ss_pred HcCCcEEEEecchhH
Q 013153 155 LRNKHLAFVGDSMAR 169 (448)
Q Consensus 155 lRgKri~FVGDSl~R 169 (448)
+..|||+|+|||++-
T Consensus 2 ~~~kri~~iGDSit~ 16 (207)
T d3dc7a1 2 VSFKRPAWLGDSITA 16 (207)
T ss_dssp BCCSSEEEEESTTTS
T ss_pred CCCCEEEEEehHhhc
Confidence 357999999999984
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| >d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
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| >d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
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