Citrus Sinensis ID: 013213

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------
Protein Sequence
MGRATRWLKSLFGIKNTTSANSGDRRDKKGRGSGCSFGHSGREREREASGGSGGGLCYNPATIPPNMSPAEAAWIRSYYATETEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSHGRGTMFGGATHEKWAAVKIQSVFRGYLARRALRALKGLVKLQAHVRGYLVRKQTTATLHGMQALIRAQVTARSQRARACGGLTNNNSNRLESRARKSMERYDDETRSEQAAVSIHSRRLSASIDTTIDESPKIVEVDTGSNRPKSRSRRTNTSVSDFSDDPHYQTISSPLPSRIYQCLSIPDGRNFQESDWGLTGDECKFSTAQSTPRFVSFDRSKAPATPAKSVCADNFFRQYNFPNYMANTKSFKAKLRSHSAPKQRPEPGPKRRLSLNEMMESRSSLSGIRMQRSCSQAQEVISFKNTVIGKLDRSTELCREPERNNYVQRKW
Secondary Structure (PSIPRED)
cccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHccccccccHHHHHHHHHHHHcccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcHHEEEEcccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccHHHHHccccccccccccccccHHHccccccccccccccccccccHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MGRATRWLKSLFGiknttsansgdrrdkkgrgsgcsfghsgrerereasggsggglcynpatippnmspaEAAWIRSYYATETEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTshgrgtmfggathEKWAAVKIQSVFRGYLARRALRALKGLVKLQAHVRGYLVRKQTTATLHGMQALIRAQVTARSQRAracggltnnnsnrLESRARKSMERYDDETRSEQAAVSIHSRRlsasidttidespkivevdtgsnrpksrsrrtntsvsdfsddphyqtissplpsriyqclsipdgrnfqesdwgltgdeckfstaqstprfvsfdrskapatpaksvcadnffrqynfpnymanTKSFKAklrshsapkqrpepgpkrrlSLNEMMESRSSLSGIRMQRSCSQAQEVISFKntvigkldrstelcrepernnyvqrkw
Flexible Loop (DISEMBL)
mgratrwlkslfgiknttsansgdrrdkkgrgsgcsfghsgrerereasggsggGLCYNPATIPPNMSPAEAAWIRSYYATETEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSHGRGTMFGGATHEKWAAVKIQSVFRGYLARRALRALKGLVKLQAHVRGYLVRKQTTATLHGMQALIRAQVTARSQRaracggltnnnsnrlesrarksmeryddetrseqaavsihsrrlsasidttidespkivevdtgsnrpksrsrrtntsvsdfsddphyqtissplpsRIYQCLSIPDGRNFQESDWGLTGDECKFSTAQSTPRFVSFDRSKAPATPAKSVCADNFFRQYNFPNYMANTKSFKAKlrshsapkqrpepgpkrrlslNEMMESRSSLSGIRMQRSCSQAqevisfkntvigkldrstelcrepernnyvqrkw
Low Complexity Region (SEG)
MGRATRWLKSLFGIKNTTSANsgdrrdkkgrgsgCSFghsgrerereasggsgggLCYNPATIPPNMSPAEAAWIRSYYATETEKEQNKHaiavaaataaaadaavaaaqaavavvRLTSHGRGTMFGGATHEKWAAVKIQSVFRGYlarralralKGLVKLQAHVRGYLVRKQTTATLHGMQALIRAQVTARSQRARACGGLTNNNSNRLESRARKSMERYDDETRSEQAAVSIHSRRLSASIDTTIDESPKIVEVDTGSNRPKSRSRRTNTSVSDFSDDPHYQTISSPLPSRIYQCLSIPDGRNFQESDWGLTGDECKFSTAQSTPRFVSFDRSKAPATPAKSVCADNFFRQYNFPNYMANTKSFKAKLRSHSAPKQRPEPGPKRRLSLNEMMESRSSLSGIRMQRSCSQAQEVISFKNTVIGKLDRSTELCREPERNNYVQRKW
Disordered region (IsUnstruct)
******WLKSLF********************************************CYN***********EAAWIRSYYATETEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSHGRGTMFGGATHEKWAAVKIQSVFRGYLARRALRALKGLVKLQAHVRGYLVRKQTTATLHGMQALIRAQVT******************************************************************************************************RIYQCLSIPDGRNFQESDWGLTGDECKF***********************SVCADNFFRQYNFPNYMAN****************************************************VISFKNTVIGK*********************
Disordered Region (DISOPRED)
MGRATRWLKS****************************************************************************************AAAA*A**AA**AAV******************HEKWAAVKIQSVFRGYLARRALRALKGLVKLQAHVRGYLVRKQTTATLHGMQALIRAQVTARSQRARAC************************************************DESPKIVEV***************************************************************************************************************************************************************************************NYVQRKW
Disordered Region (DISEMBL)
MGRATRWLKSLFGIKNTT***********************************GGLCYNPATIPPNMSPAEAAWIRSYYATETEKEQNKHAIAVA***************AAVAVVRLTSHGRGTMFGGATHEKWAAVKIQSVFRGYLARRALRALKGLVKLQAHVRGYLVRKQTTATLHGMQALIRA********ARACGGLTNNNSNRLESR**********************SRRLSASIDTTIDESPKIVE*******************SDFSDDPHYQTISSPLPSRIYQCLSIPDGRNFQESDWGLTGDECKFSTAQSTPRFVSF**********KSVCADNFFRQYNFPNYMANTKSF******************KRRLSLNEM*****************QAQEVISFKNTVIGKLDRSTELCREPERNNYVQRKW
Disordered Region (DISPRO)
************************************************************************AWIRSYYATETEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSHGRGTMFGGATHEKWAAVKIQSVFRGYLARRALRALKGLVKLQAHVRGYLVRKQTTATLHGMQALIRAQVTARSQRARACGGL************************SEQAAVSIHSRRLSASIDTTIDESPKIVEVDTG******************************************************************************************************************************************************************************REPERNNYV**KW
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGRATRWLKSLFGIKNTTSANSGDRRDKKGRGSGCSFGHSGREREREASGGSGGGLCYNPATIPPNMSPAEAAWIRSYYATETEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSHGRGTMFGGATHEKWAAVKIQSVFRGYLARRALRALKGLVKLQAHVRGYLVRKQTTATLHGMQALIRAQVTARSQRARACGGLTNNNSNRLESRARKSMERYDDETRSEQAAVSIHSRRLSASIDTTIDESPKIVEVDTGSNRPKSRSRRTNTSVSDFSDDPHYQTISSPLPSRIYQCLSIPDGRNFQESDWGLTGDECKFSTAQSTPRFVSFDRSKAPATPAKSVCADNFFRQYNFPNYMANTKSFKAKLRSHSAPKQRPEPGPKRRLSLNEMMESRSSLSGIRMQRSCSQAQEVISFKNTVIGKLDRSTELCREPERNNYVQRKW
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	447	2.2.26 [Sep-21-2011]
Q8L4D8	587	Protein IQ-DOMAIN 31 OS=A	no	no	0.140	0.107	0.523	3e-12
Q8LPG9	668	Protein IQ-DOMAIN 14 OS=A	no	no	0.140	0.094	0.507	9e-12
Q9SF32	454	Protein IQ-DOMAIN 1 OS=Ar	no	no	0.234	0.231	0.335	9e-09
Q9FXI5	794	Protein IQ-DOMAIN 32 OS=A	no	no	0.174	0.098	0.397	1e-08

>sp|Q8L4D8|IQD31_ARATH Protein IQ-DOMAIN 31 OS=Arabidopsis thaliana GN=IQD31 PE=1 SV=1

 Score = 73.6 bits (179), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 33/63 (52%), Positives = 45/63 (71%)

Query: 136 AAVKIQSVFRGYLARRALRALKGLVKLQAHVRGYLVRKQTTATLHGMQALIRAQVTARSQ 195
           AA  +Q+ FRGYLARRA  ALKG+++LQA +RG+LVR+Q  ATL  +  ++R Q  AR +
Sbjct: 115 AATSVQAAFRGYLARRAFWALKGIIRLQALIRGHLVRRQAVATLFSVMGIVRLQAFARGR 174

Query: 196 RAR 198
             R
Sbjct: 175 EIR 177

Arabidopsis thaliana (taxid: 3702)

>sp|Q8LPG9|IQD14_ARATH Protein IQ-DOMAIN 14 OS=Arabidopsis thaliana GN=IQD14 PE=1 SV=1

 Score = 72.0 bits (175), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 32/63 (50%), Positives = 45/63 (71%)

Query: 136 AAVKIQSVFRGYLARRALRALKGLVKLQAHVRGYLVRKQTTATLHGMQALIRAQVTARSQ 195
           +A KIQ  FRGY+AR++ RALKGLV+LQ  VRGY V++QT   +  MQ ++R Q   +S+
Sbjct: 324 SATKIQGAFRGYMARKSFRALKGLVRLQGVVRGYSVKRQTINAMKYMQQVVRVQSQIQSR 383

Query: 196 RAR 198
           R +
Sbjct: 384 RIK 386

May be involved in cooperative interactions with calmodulins or calmodulin-like proteins. May associate with nucleic acids and regulate gene expression at the transcriptional or post-transcriptional level.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SF32|IQD1_ARATH Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana GN=IQD1 PE=1 SV=1

 Score = 62.0 bits (149), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 23/128 (17%)

Query: 127 FGGATHEKWAAVKIQSVFRGYLARRALRALKGLVKLQAHVRGYLVRKQTTATLHGMQALI 186
           F G + E+ AA+ IQS FRG+LARR  + ++G  +L+  + G +V++Q   TL  MQ L 
Sbjct: 101 FAGKSKEEAAAILIQSTFRGHLARRESQVMRGQERLKLLMEGSVVQRQAAITLKCMQTLS 160

Query: 187 RAQVTARSQR------------------ARACGGLTN----NNSNRLESRARKSM-ERYD 223
           R Q   RS+R                  A+  GGL N    N SN+ + +    M  +Y+
Sbjct: 161 RVQSQIRSRRIRMSEENQARHKQLLQKHAKELGGLKNGGNWNYSNQSKEQVEAGMLHKYE 220

Query: 224 DETRSEQA 231
              R E+A
Sbjct: 221 ATMRRERA 228

Modulates expression of glucosinolate pathway genes. May associate with nucleic acids and regulate gene expression at the transcriptional or post-transcriptional level.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FXI5|IQD32_ARATH Protein IQ-DOMAIN 32 OS=Arabidopsis thaliana GN=IQD32 PE=1 SV=3

 Score = 61.6 bits (148), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 47/78 (60%)

Query: 138 VKIQSVFRGYLARRALRALKGLVKLQAHVRGYLVRKQTTATLHGMQALIRAQVTARSQRA 197
           V IQ+  RG+LARR L   K ++KLQA VRG+LVR Q   +L  +QA+++ Q   R++ +
Sbjct: 219 VVIQAAVRGFLARRELLRSKKVIKLQAAVRGHLVRSQAMGSLRCVQAIVKMQAMVRARHS 278

Query: 198 RACGGLTNNNSNRLESRA 215
              G   +  S++ E  A
Sbjct: 279 TKDGSRVSATSDKSEPNA 296

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	447
297738745	435	unnamed protein product [Vitis vinifera]	0.946	0.972	0.718	1e-160
255546329	429	conserved hypothetical protein [Ricinus	0.946	0.986	0.721	1e-159
359484332	410	PREDICTED: uncharacterized protein LOC10	0.899	0.980	0.698	1e-151
357520831	429	hypothetical protein MTR_8g102400 [Medic	0.908	0.946	0.611	1e-138
356523101	417	PREDICTED: uncharacterized protein LOC10	0.906	0.971	0.643	1e-125
449489798	410	PREDICTED: uncharacterized protein LOC10	0.903	0.985	0.623	1e-123
356497579	420	PREDICTED: uncharacterized protein LOC10	0.914	0.973	0.638	1e-123
359482886	402	PREDICTED: uncharacterized protein LOC10	0.872	0.970	0.633	1e-122
356527749	413	PREDICTED: uncharacterized protein LOC10	0.868	0.939	0.601	1e-119
147790300	387	hypothetical protein VITISV_011284 [Viti	0.838	0.968	0.621	1e-118

>gi|297738745|emb|CBI27990.3| unnamed protein product [Vitis vinifera]

 Score =  570 bits (1469), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 330/459 (71%), Positives = 372/459 (81%), Gaps = 36/459 (7%)

Query: 1   MGRATRWLKSLFGIK----NTTSANSGDRRDKKGRGSGCSFGHSGREREREASGGSGGGL 56
           MGRATRW K LFG+K    +  ++N GDR+DK    S  S GHSGR+           GL
Sbjct: 1   MGRATRWFKGLFGLKRDKEHKDNSNPGDRKDK----SRWSSGHSGRD---------SVGL 47

Query: 57  CYNPATIPPNMSPAEAAWIRSYYATETEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVV 116
           C+NP TIPPN+S AEAAW+RSYY T+TE EQNKHAIAVAAATAAAADAAVAAAQAAVAVV
Sbjct: 48  CHNPTTIPPNISAAEAAWLRSYY-TDTENEQNKHAIAVAAATAAAADAAVAAAQAAVAVV 106

Query: 117 RLTSHGRGTMFGGATHEKWAAVKIQSVFRGYLARRALRALKGLVKLQAHVRGYLVRKQTT 176
           RLTSHGRGTMFGG   E+W AVKIQ+VFRGYLAR+ALRALKGLVKLQA VRGYLVRKQ T
Sbjct: 107 RLTSHGRGTMFGGG-RERWGAVKIQTVFRGYLARKALRALKGLVKLQALVRGYLVRKQAT 165

Query: 177 ATLHGMQALIRAQVTARSQRARACGGLTNNNSNRLESRARKSMERYDDETRSEQAAVSIH 236
           ATLHGMQALIRAQ T R+Q+AR       +N  R E + RKSMER+D E+RSE  A SIH
Sbjct: 166 ATLHGMQALIRAQATVRAQKAREL----ISNEKRFEIQTRKSMERFD-ESRSEHTA-SIH 219

Query: 237 SRRLSASIDTT---IDESPKIVEVDTGSNRPKSRSRRTNTSVSDFSDDPHYQTISSPLPS 293
           SRRLSAS+DTT   ID SPKIVEVDTG  RPKSRSRRTNTSVSD  DD HYQT+SSPLP 
Sbjct: 220 SRRLSASLDTTFNAIDGSPKIVEVDTG--RPKSRSRRTNTSVSDSGDDQHYQTLSSPLPC 277

Query: 294 R----IYQCLSIPDGRNFQESDWGLTGDECKFSTAQSTPRFVSFDRSKAPATPAKSVCAD 349
           R    +   LS PD RN+Q+SDWGLTGDEC+FSTAQSTPRF++ +RS  P TPAK+VCAD
Sbjct: 278 RTPIPVPVRLSTPDHRNYQDSDWGLTGDECRFSTAQSTPRFMNSERSNVPITPAKTVCAD 337

Query: 350 NFFRQY-NFPNYMANTKSFKAKLRSHSAPKQRPEPGPKRRLSLNEMMESRSSLSGIRMQR 408
           +FFRQY NFPNYMANT+SFKAKLRSHSAPKQRPEPGPK+RLSLNEMMESRSSLSG++MQR
Sbjct: 338 SFFRQYTNFPNYMANTQSFKAKLRSHSAPKQRPEPGPKKRLSLNEMMESRSSLSGVKMQR 397

Query: 409 SCSQAQEVISFKNTVIGKLDRSTELCREPERNNYVQRKW 447
           SCS+ QE I+FKN V+GKL+R +E+ RE ER N +QR+W
Sbjct: 398 SCSRVQEAINFKNAVMGKLERPSEIVREAERCN-LQRRW 435

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255546329|ref|XP_002514224.1| conserved hypothetical protein [Ricinus communis] gi|223546680|gb|EEF48178.1| conserved hypothetical protein [Ricinus communis]

 Score =  568 bits (1464), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 327/453 (72%), Positives = 370/453 (81%), Gaps = 30/453 (6%)

Query: 1   MGRATRWLKSLFGIKNTTSANSGDRRDKKGRGSGCSFGHSGREREREASGGSGGGLCYNP 60
           MGRATRWLK LFGI+N +S+++ D  D+K             ++ R +SG    GLC+NP
Sbjct: 1   MGRATRWLKGLFGIRNNSSSSNKDNFDRK-------------DKNRCSSGRDSSGLCHNP 47

Query: 61  ATIPPNMSPAEAAWIRSYYATETEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTS 120
           ATIPPN+SPAEAAW+RS+Y  ETEKEQ+KHAIAVAAATAAAADAAVAAAQAAVAVVRLTS
Sbjct: 48  ATIPPNISPAEAAWLRSFY-NETEKEQSKHAIAVAAATAAAADAAVAAAQAAVAVVRLTS 106

Query: 121 HGRGTMFGGATHEKWAAVKIQSVFRGYLARRALRALKGLVKLQAHVRGYLVRKQTTATLH 180
           +GRGTMFGG   E+WAA+KIQ+VFRGYLAR+ALRALKGLVKLQAH RGYLVRKQ TATLH
Sbjct: 107 NGRGTMFGGG-QERWAAIKIQTVFRGYLARKALRALKGLVKLQAHFRGYLVRKQATATLH 165

Query: 181 GMQALIRAQVTARSQRARACGGLTNNNSNRLESRARKSMERYDDETRSEQAAVSIHSRRL 240
            MQALIRAQ T RSQRAR          NR E RARKSMER+D ETRSE  A S+HSRRL
Sbjct: 166 SMQALIRAQATVRSQRARNLI----KTENRFEIRARKSMERFD-ETRSEHTA-SVHSRRL 219

Query: 241 SASIDTT----IDESPKIVEVDTGSNRPKSRSRRTNTSVSDFSDDPHYQTISSPLPSRIY 296
           S+S+D T    IDESPKIVEVDTG  RPKSRSRRTNTSVSDFSDDP YQT+SSPLPSR  
Sbjct: 220 SSSLDATFVNPIDESPKIVEVDTGGCRPKSRSRRTNTSVSDFSDDPFYQTLSSPLPSRFP 279

Query: 297 QCLSIPDGRNFQESDWGLTGDECKFSTAQSTPRFVSFDRSKAPATPAKSVCADNFFRQY- 355
             LS+ D RNFQ+SDWGLTGDEC+FSTAQSTPRF     +  P TPAKSVC DNFFRQY 
Sbjct: 280 PRLSMLDTRNFQDSDWGLTGDECRFSTAQSTPRFGG--SNNPPLTPAKSVCEDNFFRQYG 337

Query: 356 NFPNYMANTKSFKAKLRSHSAPKQRPEPGPKRRLSLNEMMESRSSLSGIRMQRSCSQAQE 415
           N PNYMANTKSFKAK+RS+SAPKQRP+PGPK+RLSLNE+MESR+S+SG+RMQRSCSQ Q+
Sbjct: 338 NCPNYMANTKSFKAKVRSYSAPKQRPDPGPKKRLSLNELMESRNSISGVRMQRSCSQVQD 397

Query: 416 VISFKNTVIGKLDRSTE-LCREPERNNYVQRKW 447
            I+FKN V+GKLDR T+   REPER NY++R+W
Sbjct: 398 AINFKNAVLGKLDRCTDQFAREPER-NYLRRRW 429

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359484332|ref|XP_002280341.2| PREDICTED: uncharacterized protein LOC100245766 [Vitis vinifera]

 Score =  540 bits (1392), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 318/455 (69%), Positives = 357/455 (78%), Gaps = 53/455 (11%)

Query: 1   MGRATRWLKSLFGIK----NTTSANSGDRRDKKGRGSGCSFGHSGREREREASGGSGGGL 56
           MGRATRW K LFG+K    +  ++N GDR+DK    S  S GHSGR+           GL
Sbjct: 1   MGRATRWFKGLFGLKRDKEHKDNSNPGDRKDK----SRWSSGHSGRD---------SVGL 47

Query: 57  CYNPATIPPNMSPAEAAWIRSYYATETEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVV 116
           C+NP TIPPN+S AEAAW+RSYY T+TE EQNKHAIAVAAATAAAADAAVAAAQAAVAVV
Sbjct: 48  CHNPTTIPPNISAAEAAWLRSYY-TDTENEQNKHAIAVAAATAAAADAAVAAAQAAVAVV 106

Query: 117 RLTSHGRGTMFGGATHEKWAAVKIQSVFRGYLARRALRALKGLVKLQAHVRGYLVRKQTT 176
           RLTSHGRGTMFGG   E+W AVKIQ+VFRGYLAR+ALRALKGLVKLQA VRGYLVRKQ T
Sbjct: 107 RLTSHGRGTMFGGG-RERWGAVKIQTVFRGYLARKALRALKGLVKLQALVRGYLVRKQAT 165

Query: 177 ATLHGMQALIRAQVTARSQRARACGGLTNNNSNRLESRARKSMERYDDETRSEQAAVSIH 236
           ATLHGMQALIRAQ T R+Q+AR       +N  R E + RKSMER+D E+RSE  A SIH
Sbjct: 166 ATLHGMQALIRAQATVRAQKAREL----ISNEKRFEIQTRKSMERFD-ESRSEHTA-SIH 219

Query: 237 SRRLSASIDTT---IDESPKIVEVDTGSNRPKSRSRRTNTSVSDFSDDPHYQTISSPLPS 293
           SRRLSAS+DTT   ID SPKIVEVDTG  RPKSRSRRTNTSVSD  DD HYQT       
Sbjct: 220 SRRLSASLDTTFNAIDGSPKIVEVDTG--RPKSRSRRTNTSVSDSGDDQHYQT------- 270

Query: 294 RIYQCLSIPDGRNFQESDWGLTGDECKFSTAQSTPRFVSFDRSKAPATPAKSVCADNFFR 353
                         Q+SDWGLTGDEC+FSTAQSTPRF++ +RS  P TPAK+VCAD+FFR
Sbjct: 271 --------------QDSDWGLTGDECRFSTAQSTPRFMNSERSNVPITPAKTVCADSFFR 316

Query: 354 QY-NFPNYMANTKSFKAKLRSHSAPKQRPEPGPKRRLSLNEMMESRSSLSGIRMQRSCSQ 412
           QY NFPNYMANT+SFKAKLRSHSAPKQRPEPGPK+RLSLNEMMESRSSLSG++MQRSCS+
Sbjct: 317 QYTNFPNYMANTQSFKAKLRSHSAPKQRPEPGPKKRLSLNEMMESRSSLSGVKMQRSCSR 376

Query: 413 AQEVISFKNTVIGKLDRSTELCREPERNNYVQRKW 447
            QE I+FKN V+GKL+R +E+ RE ER N +QR+W
Sbjct: 377 VQEAINFKNAVMGKLERPSEIVREAERCN-LQRRW 410

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357520831|ref|XP_003630704.1| hypothetical protein MTR_8g102400 [Medicago truncatula] gi|355524726|gb|AET05180.1| hypothetical protein MTR_8g102400 [Medicago truncatula]

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 275/450 (61%), Positives = 332/450 (73%), Gaps = 44/450 (9%)

Query: 1   MGRATRWLKSLFGIKNTTSANSGDRRDKKGRGSGCSFGHSGREREREASGGSGGGLCYNP 60
           MGR  RW KSLFGIK     ++ +    K      S  H   +   + S     GLC+NP
Sbjct: 1   MGRTIRWFKSLFGIKKDRDNSNSNSSSTKW---NPSLPHPPSQ---DFSKRDSRGLCHNP 54

Query: 61  ATIPPNMSPAEAAWIRSYYATETEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTS 120
           ATIPPN+SPAEAAW++S+Y+ ETEKEQNKHAIAVAA                 AVVRLTS
Sbjct: 55  ATIPPNISPAEAAWVQSFYS-ETEKEQNKHAIAVAAL--------------PWAVVRLTS 99

Query: 121 HGRGTMFGGATHEKWAAVKIQSVFRGYLARRALRALKGLVKLQAHVRGYLVRKQTTATLH 180
           HGR TMFGG  H+K+AAVKIQ+ FRGYLAR+ALRALKGLVKLQA VRGYLVRKQ TATLH
Sbjct: 100 HGRDTMFGGG-HQKFAAVKIQTTFRGYLARKALRALKGLVKLQALVRGYLVRKQATATLH 158

Query: 181 GMQALIRAQVTARSQRARACGGLTNNNSN-RLESRARKSMERYD--DETRSE-QAAVSIH 236
            MQALIRAQ T RS ++R     T N +N R +++AR+S ERY+  +  R+E  A++ IH
Sbjct: 159 SMQALIRAQATVRSHKSRGLIISTKNETNNRFQTQARRSTERYNHNESNRNEYTASIPIH 218

Query: 237 SRRLSASIDTTIDE----SPKIVEVDTGSNRPKSRSRRTNTSVSDFSDDPHYQTISSPL- 291
           SRRLS+S D T++     SPKIVEVDTG  RPKSRSRR+NTS+SDF DDP +QT+SSPL 
Sbjct: 219 SRRLSSSFDATMNSYDIGSPKIVEVDTG--RPKSRSRRSNTSISDFGDDPSFQTLSSPLQ 276

Query: 292 --PSRIYQCLSIPDGRNFQESDWGLTGDECKFSTAQSTPRFVSFDRSK--APATPAKSVC 347
             PS++Y    IP+ RN+ ESDWG+TG+EC+FSTAQSTPRF S       AP+TP K++C
Sbjct: 277 VTPSQLY----IPNQRNYNESDWGITGEECRFSTAQSTPRFTSSCSCGFVAPSTP-KTIC 331

Query: 348 ADNFFR-QY-NFPNYMANTKSFKAKLRSHSAPKQRPEPGPKRRLSLNEMMESRSSLSGIR 405
            D+F+   Y N+PNYMANT+SFKAKLRSHSAPKQRPEPGPK+RLSLNE+MESR+SLSG+R
Sbjct: 332 GDSFYIGDYGNYPNYMANTQSFKAKLRSHSAPKQRPEPGPKKRLSLNELMESRNSLSGVR 391

Query: 406 MQRSCSQAQEVISFKNTVIGKLDRSTELCR 435
           MQRSCSQ Q+ I+FKN V+ KLD+ST+  R
Sbjct: 392 MQRSCSQIQDAINFKNAVMSKLDKSTDFDR 421

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356523101|ref|XP_003530180.1| PREDICTED: uncharacterized protein LOC100788710 [Glycine max]

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 285/443 (64%), Positives = 330/443 (74%), Gaps = 38/443 (8%)

Query: 1   MGRATRWLKSLFGIKNTTSANSGDRRDKKGRGSGCSFGHSGREREREASGGSGGGLCYNP 60
           MGRATRW+KSLFGI+         +  +K +   C    S      E++  S   LC+NP
Sbjct: 1   MGRATRWVKSLFGIR---------KEKEKKQNFKCGEAKSMEFCCSESTSNSRV-LCHNP 50

Query: 61  ATIPPNMSPAEAAWIRSYYATETEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTS 120
            TI PN+S AEAAW++S+Y   TEK+QNKHAIAVAAATAAAADAA+AAAQAAVAVVRLTS
Sbjct: 51  GTITPNLSQAEAAWLQSFY---TEKDQNKHAIAVAAATAAAADAAMAAAQAAVAVVRLTS 107

Query: 121 HGRGTMFGGATHEKWAAVKIQSVFRGYLARRALRALKGLVKLQAHVRGYLVRKQTTATLH 180
            GRG    G   E WAA+KIQ+VFRGYLAR+ALRALKGLVKLQA VRGYLVRKQ TATLH
Sbjct: 108 QGRGGTMFGVGPEMWAAIKIQTVFRGYLARKALRALKGLVKLQALVRGYLVRKQATATLH 167

Query: 181 GMQALIRAQVTARSQRARACGGLTNNNSNRLESRARKSMERYDDETRSEQAAVSIHSRRL 240
            MQAL+RAQ T RS ++R     T N + R + RAR+SMER+DD T+SE  AV IHSRR+
Sbjct: 168 SMQALVRAQATIRSHKSRRL-MTTKNEAYRSQIRARRSMERFDD-TKSE-YAVPIHSRRV 224

Query: 241 SASIDTTI-----DESPKIVEVDTGSNRPKSRSRRTNTSVSDFSDDPHYQTISSPLPSRI 295
           S+  D TI     D  PKIVEVDT +  PKSR+RRT   VSDF D+P  Q +S+  P+R 
Sbjct: 225 SSYFDATINNNSVDGIPKIVEVDTFT--PKSRNRRT---VSDFGDEPSLQALSNRTPTR- 278

Query: 296 YQCLSIPDGRNFQESDWGLTGDECKF-STAQSTPRFV---SFDRSKAPATPAKSVCADN- 350
              LSIPD RNFQ+S+WGLTG+EC+F STAQSTPRF    S      P TP KSVC DN 
Sbjct: 279 ---LSIPDQRNFQDSEWGLTGEECRFSSTAQSTPRFTNSCSCGSVAVPMTP-KSVCTDNL 334

Query: 351 -FFRQY-NFPNYMANTKSFKAKLRSHSAPKQRPEPGPKRRLSLNEMMESRSSLSGIRMQR 408
            F RQY NFPNYMA+T+SFKAKLRSHSAPKQRPEPGP++R+SLNEMMESRSSLSG+RMQR
Sbjct: 335 FFLRQYGNFPNYMASTQSFKAKLRSHSAPKQRPEPGPRKRISLNEMMESRSSLSGVRMQR 394

Query: 409 SCSQAQEVISFKNTVIGKLDRST 431
           SCSQ QEVISFKN V+GKL +ST
Sbjct: 395 SCSQVQEVISFKNAVMGKLQKST 417

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449489798|ref|XP_004158419.1| PREDICTED: uncharacterized protein LOC101226199 [Cucumis sativus]

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 281/451 (62%), Positives = 327/451 (72%), Gaps = 47/451 (10%)

Query: 1   MGRATRWLKSLFGIKNTTSANSGDRRDKKGRGSGCSFGHSGREREREASGGSGGGLCYNP 60
           MG+ATRW K+LFGIK          RDK+              + +  +      LC NP
Sbjct: 1   MGKATRWFKNLFGIK----------RDKEPTKEI--------PKSKPPTTAVDVQLCNNP 42

Query: 61  ATIPPNMSPAEAAWIRSYYATETEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTS 120
           ATIPPN+S AEAAW++S+Y+ ETEKEQ+KHAIAVAAATAAAADAAVAAAQAAVAVVRLTS
Sbjct: 43  ATIPPNLSAAEAAWLKSFYS-ETEKEQSKHAIAVAAATAAAADAAVAAAQAAVAVVRLTS 101

Query: 121 HGRGTMFGGATHEKWAAVKIQSVFRGYLARRALRALKGLVKLQAHVRGYLVRKQTTATLH 180
           HGRGTMFGG   E+WA+VKIQ+ FR YLAR+ALRALKGLVKLQA VRGYLVRKQ TATL+
Sbjct: 102 HGRGTMFGGG-RERWASVKIQTCFRAYLARKALRALKGLVKLQALVRGYLVRKQATATLY 160

Query: 181 GMQALIRAQVTARSQRARACGGLTNNNSNRLESRARKSMERYDDETRSEQAAVSIHSRRL 240
            MQALIRAQ T RSQR R           R  + ARKS ER++D T+SE   VS+HSRRL
Sbjct: 161 SMQALIRAQATVRSQRTR-----------RFINDARKSTERFED-TKSEHT-VSVHSRRL 207

Query: 241 SASIDTT--IDESPKIVEVDTGSNRPKSRSRRTNTSVSDFSDDPHYQTISSPLPSRIYQC 298
           SAS+D T  ++ESPKIVE+DTG  RPKS SRRTNTS S+ SDDP   T+SSPLP R    
Sbjct: 208 SASLDNTTFMEESPKIVEIDTG--RPKSWSRRTNTSASELSDDPFNHTLSSPLPCRTPSR 265

Query: 299 LSIPDGRNFQESDWGLTGDECKF-STAQSTPRFVSFDRSKAPA-TPAKSVCADNFFRQY- 355
           L IPD R+F E+     GD+ +  STAQSTPRF+          TPAKS+C +NFFR Y 
Sbjct: 266 LQIPDCRHFHENSDFCGGDDWRLISTAQSTPRFMGSGGGSNGPPTPAKSMCGENFFRGYL 325

Query: 356 NFPNYMANTKSFKAKLRSHSAPKQRPEPGPKRRLSLNEMMESRSSLSGIRMQRSCSQAQE 415
           NFPNYMANT+SFKAKLRS SAPKQRPE G K+R+SLNE+MESR+SLSG++MQRSCSQ QE
Sbjct: 326 NFPNYMANTQSFKAKLRSQSAPKQRPEIGSKKRVSLNELMESRNSLSGVKMQRSCSQVQE 385

Query: 416 VISFKNTVIGKLDRSTELCREPERNNYVQRK 446
            I+FKN V+ KLDR +E        N +QRK
Sbjct: 386 AINFKNAVMSKLDRPSEF-------NNLQRK 409

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356497579|ref|XP_003517637.1| PREDICTED: uncharacterized protein LOC100797909 [Glycine max]

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 282/442 (63%), Positives = 327/442 (73%), Gaps = 33/442 (7%)

Query: 1   MGRATRWLKSLFGIKNTTSANSGDRRDKKGRGSGCSFGHSGREREREASGGSGGGLCYNP 60
           MGRATRW+KSLFGI+         R  +K     C    S      E++  S   LC+N 
Sbjct: 1   MGRATRWVKSLFGIR---------REKEKKLNFRCGEAKSMELCCSESTSNSTV-LCHNS 50

Query: 61  ATIPPNMSPAEAAWIRSYYATETEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTS 120
            TIPPN+S AEAAW++S+    TEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTS
Sbjct: 51  GTIPPNLSQAEAAWLQSFC---TEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTS 107

Query: 121 HGRGTMFGGATHEKWAAVKIQSVFRGYLARRALRALKGLVKLQAHVRGYLVRKQTTATLH 180
            GRG    G   E WAA+KIQ+VFRG+LAR+ALRALKGLVKLQA VRGYLVRK  TATLH
Sbjct: 108 QGRGRTMFGVGPEMWAAIKIQTVFRGFLARKALRALKGLVKLQALVRGYLVRKLATATLH 167

Query: 181 GMQALIRAQVTARSQRARACGGLTNNNSNRLESRARKSMERYDDETRSEQAAVSIHSRRL 240
            MQAL+RAQ   RS ++      T N + +  +RAR+SMER+DD T+SE  AV IHSRR+
Sbjct: 168 SMQALVRAQARMRSHKSLR-PMTTKNEAYKPHNRARRSMERFDD-TKSE-CAVPIHSRRV 224

Query: 241 SASIDTTI----DESPKIVEVDTGSNRPKSRSRRTNTSVSDFSDDPHYQTISSPLPS--R 294
           S+S D TI    D SPKIVEVDT   RPKSRSRR   ++SDF D+P  + +SSPLP   R
Sbjct: 225 SSSFDATINNSVDGSPKIVEVDTF--RPKSRSRR---AISDFGDEPSLEALSSPLPVPYR 279

Query: 295 IYQCLSIPDGRNFQESDWGLTGDECKFSTAQSTPRFVSFDR--SKAPATPAKSVCADN-- 350
               LSIPD RN Q+S+WGLTG+EC+FSTA STPRF +     S AP TP KSVC DN  
Sbjct: 280 TPTRLSIPDQRNIQDSEWGLTGEECRFSTAHSTPRFTNSCTCGSVAPLTP-KSVCTDNYL 338

Query: 351 FFRQY-NFPNYMANTKSFKAKLRSHSAPKQRPEPGPKRRLSLNEMMESRSSLSGIRMQRS 409
           F RQY NFPNYM +T+SFKAKLRSHSAPKQRPEPGP++R+SLNEMMESR+SLSG+RMQRS
Sbjct: 339 FLRQYGNFPNYMTSTQSFKAKLRSHSAPKQRPEPGPRKRISLNEMMESRNSLSGVRMQRS 398

Query: 410 CSQAQEVISFKNTVIGKLDRST 431
           CSQ QEVI+FKN V+GKL +ST
Sbjct: 399 CSQVQEVINFKNVVMGKLQKST 420

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359482886|ref|XP_002277925.2| PREDICTED: uncharacterized protein LOC100241183 [Vitis vinifera]

 Score =  444 bits (1141), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 273/431 (63%), Positives = 320/431 (74%), Gaps = 41/431 (9%)

Query: 1   MGRATRWLKSLFGIK----NTTSANSGDRRDKKGRGSGCSFGHSGREREREASGGSGGGL 56
           MGRATRWL+ L G+K       ++ +GDR++KK      SF   GR+           G+
Sbjct: 1   MGRATRWLRGLLGMKKDKEQVENSTAGDRKEKKR----WSFAKPGRD---------TSGV 47

Query: 57  CYNPATIPPNMSPAEAAWIRSYYATETEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVV 116
             NP   P N+ P ++AW+RSY  +ETEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVV
Sbjct: 48  GQNPVNFPANI-PVDSAWLRSYI-SETEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVV 105

Query: 117 RLTSHGRGTMFGGATHEKWAAVKIQSVFRGYLARRALRALKGLVKLQAHVRGYLVRKQTT 176
           RLTSHGRGT+FGG   ++WAA KIQ+VFRGYLAR+A RALKGLVKLQA VRG+LVRK+  
Sbjct: 106 RLTSHGRGTLFGGG-RDRWAATKIQTVFRGYLARKAHRALKGLVKLQALVRGFLVRKRAA 164

Query: 177 ATLHGMQALIRAQVTARSQRA-RACGGLTNNNSNRL--ESRARKSMERYDDETRSEQAAV 233
           ATLH MQALIRAQ   RSQR  RA      N  NR   E R R+S+ER++ ETRSE    
Sbjct: 165 ATLHSMQALIRAQAAVRSQRTLRA-----RNKENRFPPEMRPRRSIERFE-ETRSE---- 214

Query: 234 SIHSRRLSASIDTTI---DESPKIVEVDTGSNRPKSRSRRT-NTSVSDFSDDPHYQTISS 289
             HS+R+S S +T++   DESPKIVE+DT   +PKSRSRR  NTS SD  +DP Y T+SS
Sbjct: 215 -FHSKRMSTSFETSVNAFDESPKIVEIDTF--KPKSRSRRMMNTSTSDSGEDPPYLTLSS 271

Query: 290 PLPSRIYQCLSIPDGRNFQESDWGLTGDECKFSTAQSTPRFVSFDRSKAPATPAKSVCAD 349
           PLP  +   LSIPD RNFQ+ +W  TGDEC+FSTAQSTPR  +  R+ AP TPAKSVC D
Sbjct: 272 PLPCPVPARLSIPDCRNFQDFEWCFTGDECRFSTAQSTPRLANTSRAVAPVTPAKSVCGD 331

Query: 350 NFFRQY-NFPNYMANTKSFKAKLRSHSAPKQRPEPGPKRRLSLNEMMESRSSLSGIRMQR 408
           +FFR Y NFPNYMANT+SFKAKLRSHSAPKQRPEPGPKRR SLNE+M SR+SLSG+RMQR
Sbjct: 332 SFFRPYSNFPNYMANTQSFKAKLRSHSAPKQRPEPGPKRRFSLNEIMASRTSLSGVRMQR 391

Query: 409 SCSQAQEVISF 419
           SCSQ QE ++F
Sbjct: 392 SCSQVQEALNF 402

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356527749|ref|XP_003532470.1| PREDICTED: uncharacterized protein LOC100800892 [Glycine max]

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 284/472 (60%), Positives = 326/472 (69%), Gaps = 84/472 (17%)

Query: 1   MGRATRWLKSLFGIKNTTSANSGDRRDKKGRGSGCSFGHSGREREREASGGSGGGLCYNP 60
           MGRA RWLK LFGI+        DR  K+         HS R+           GLC+NP
Sbjct: 1   MGRAIRWLKGLFGIRT-------DRERKENSN------HSDRDSR---------GLCHNP 38

Query: 61  ATIPPNMSPAEAAWIRSYYATETEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTS 120
            TIPPN+SPAEAAW++S+Y +ETEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTS
Sbjct: 39  TTIPPNISPAEAAWLQSFY-SETEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTS 97

Query: 121 HG--RGTMFGGATHEKWAAVKIQSVFRGYLARRALRALKGLVKLQAHVRGYLVRKQTTAT 178
           HG  R T FGGA  E+ A VKIQ+VFRGYLAR+ALRALKGLVKLQA VRGYLVRKQ  AT
Sbjct: 98  HGNSRDTTFGGAGQERLAVVKIQTVFRGYLARKALRALKGLVKLQALVRGYLVRKQAAAT 157

Query: 179 LHGMQALIRAQVTARSQRARACGGLTNNNSNRLESRARKSMERYDDETRSEQAAVSIHSR 238
           LH MQALIRAQ T RS+++R       N ++R +++AR+SMER+DD  +S   A  I SR
Sbjct: 158 LHSMQALIRAQATVRSKKSR-------NEAHRFQTQARRSMERFDD-IKSVYIA-PIQSR 208

Query: 239 RLSASIDTT------IDESPKIVEVDTGSNRPKSRSRRTNTSVSDFSDDPHYQTISSPLP 292
           RLS+S D T      +D SPKIVEVDTG  RPKSRSRR+NTS+SDF DDP          
Sbjct: 209 RLSSSFDATMNNANSVDGSPKIVEVDTG--RPKSRSRRSNTSMSDFGDDPS--------- 257

Query: 293 SRIYQCLSIPDGRNFQESDWGLTGDECKFSTAQSTPRFV----SFDRSKAPATPA----- 343
                        +FQ   WGLTG+EC+FSTAQSTPRF     S   S   A P      
Sbjct: 258 -------------SFQ---WGLTGEECRFSTAQSTPRFTTNSCSCGGSVVVAAPTNMSMS 301

Query: 344 ---KSVCADN--FFRQY--NFPNYMANTKSFKAKLRSHSAPKQRPEP-GPKRRLSLNEMM 395
              KSVC +N  F+ QY  NFPNYMA+T+SFKAKLRSHSAPKQRP+P GPK+RL+LNEMM
Sbjct: 302 MTPKSVCTENNFFYGQYHDNFPNYMASTQSFKAKLRSHSAPKQRPDPAGPKKRLTLNEMM 361

Query: 396 ESRSSLSGIRMQRSCSQAQEVISFKNTVIGKLDRSTELCREPERNNYVQRKW 447
           ESR SLSG RMQRSCSQ QE ISFKN V+ KL +S E+ R+ E N   QR+W
Sbjct: 362 ESRCSLSGTRMQRSCSQIQEAISFKNAVMSKLQKSAEIGRDTELNFSNQRRW 413

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147790300|emb|CAN69979.1| hypothetical protein VITISV_011284 [Vitis vinifera]

 Score =  430 bits (1106), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 268/431 (62%), Positives = 312/431 (72%), Gaps = 56/431 (12%)

Query: 1   MGRATRWLKSLFGIK----NTTSANSGDRRDKKGRGSGCSFGHSGREREREASGGSGGGL 56
           MGRATRWL+ L G+K       ++ +GDR++KK   S                       
Sbjct: 1   MGRATRWLRGLLGMKKDKEQVENSTAGDRKEKKRTQS----------------------- 37

Query: 57  CYNPATIPPNMSPAEAAWIRSYYATETEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVV 116
                T  P   P ++AW+RSY  +ETEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVV
Sbjct: 38  -----TFRPTF-PVDSAWLRSYI-SETEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVV 90

Query: 117 RLTSHGRGTMFGGATHEKWAAVKIQSVFRGYLARRALRALKGLVKLQAHVRGYLVRKQTT 176
           RLTSHGRGT+FGG   ++WAA KIQ+VFRGYLAR+A RALKGLVKLQA VRG+LVRK+  
Sbjct: 91  RLTSHGRGTLFGGG-RDRWAATKIQTVFRGYLARKAHRALKGLVKLQALVRGFLVRKRAA 149

Query: 177 ATLHGMQALIRAQVTARSQRA-RACGGLTNNNSNRL--ESRARKSMERYDDETRSEQAAV 233
           ATLH MQALIRAQ   RSQR  RA      N  NR   E R R+S+ER++ ETRSE    
Sbjct: 150 ATLHSMQALIRAQAAVRSQRTLRA-----RNKENRFPPEMRPRRSIERFE-ETRSE---- 199

Query: 234 SIHSRRLSASIDTTI---DESPKIVEVDTGSNRPKSRSRRT-NTSVSDFSDDPHYQTISS 289
             HS+R+S S +T++   DESPKIVE+DT   +PKSRSRR  NTS SD  +DP YQT+SS
Sbjct: 200 -FHSKRMSTSFETSVNAFDESPKIVEIDTF--KPKSRSRRMMNTSTSDSGEDPPYQTLSS 256

Query: 290 PLPSRIYQCLSIPDGRNFQESDWGLTGDECKFSTAQSTPRFVSFDRSKAPATPAKSVCAD 349
           PLP  +   LSIPD RNFQ+ +W  TGDEC+FSTAQSTPR  +  R+ AP TPAKSVC D
Sbjct: 257 PLPCPVPARLSIPDCRNFQDFEWCFTGDECRFSTAQSTPRLANTSRAVAPVTPAKSVCGD 316

Query: 350 NFFRQY-NFPNYMANTKSFKAKLRSHSAPKQRPEPGPKRRLSLNEMMESRSSLSGIRMQR 408
           +FFR Y NFPNYMANT+SFKAKLRSHSAPKQRPEPGPKRR SLNE+M SR+SLSG+RMQR
Sbjct: 317 SFFRPYSNFPNYMANTQSFKAKLRSHSAPKQRPEPGPKRRFSLNEIMASRTSLSGVRMQR 376

Query: 409 SCSQAQEVISF 419
           SCSQ QE ++F
Sbjct: 377 SCSQVQEALNF 387

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	447
TAIR|locus:2088319	389	IQD26 "AT3G16490" [Arabidopsis	0.440	0.506	0.459	5.2e-43
TAIR|locus:2119951	399	IQD25 "AT4G29150" [Arabidopsis	0.355	0.398	0.408	1.1e-31
TAIR|locus:2034011	351	IQD27 "AT1G51960" [Arabidopsis	0.642	0.817	0.273	1.9e-20
TAIR|locus:2174088	403	IQD23 "AT5G62070" [Arabidopsis	0.521	0.578	0.334	3.4e-19
TAIR|locus:2127243	484	IQD22 "AT4G23060" [Arabidopsis	0.561	0.518	0.296	2e-18
TAIR|locus:2100504	430	IQD3 "AT3G52290" [Arabidopsis	0.436	0.453	0.257	1.6e-13
TAIR|locus:2130200	387	IQD19 "AT4G14750" [Arabidopsis	0.268	0.310	0.396	2.1e-13
TAIR|locus:2090409	422	IQD5 "AT3G22190" [Arabidopsis	0.279	0.296	0.358	1.3e-12
TAIR|locus:2057459	416	IQD6 "AT2G26180" [Arabidopsis	0.154	0.165	0.492	1.3e-12
TAIR|locus:2097478	517	IQD13 "AT3G59690" [Arabidopsis	0.239	0.206	0.330	1.9e-12

TAIR|locus:2088319 IQD26 "AT3G16490" [Arabidopsis thaliana (taxid:3702)]

 Score = 409 (149.0 bits), Expect = 5.2e-43, Sum P(2) = 5.2e-43
 Identities = 103/224 (45%), Positives = 126/224 (56%)

Query:    70 AEAAWIRSYYATETEKEQNKHXXXXXXXXXXXXXXXXXXXXXXXXXXRLTSHGRGTMFGG 129
             A++ W+R+Y A ET+KEQNKH                          RLTS+GR   + G
Sbjct:    44 ADSVWLRTYLA-ETDKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSNGRSGGYSG 102

Query:   130 ATHEKWAAVKIQSVFRGYXXXXXXXXXKGLVKLQAHVRGYLVRKQTTATLHGMQALIRAQ 189
                E+WAAVKIQSVF+GY         KGLVKLQA VRGYLVRK+   TLH MQALIRAQ
Sbjct:   103 NAMERWAAVKIQSVFKGYLARKALRALKGLVKLQALVRGYLVRKRAAETLHSMQALIRAQ 162

Query:   190 VTARSQRARACGGLTNNNSNRLESRARKSMERYDDETRSEQAAVSIHSRRLSASID---- 245
              + RSQR         N +N    R   S+ER DD +RSE     IHS+R+S S++    
Sbjct:   163 TSVRSQRI--------NRNNMFHPR--HSLERLDD-SRSE-----IHSKRISISVEKQSN 206

Query:   246 ---TTIDE-SPKIVEVDTGSNRPKSRSRRTNTSVSDFSDDPHYQ 285
                   DE SPKIVE+DT   + KSRS+R N +VS+  DD  YQ
Sbjct:   207 HNNNAYDETSPKIVEIDT--YKTKSRSKRMNVAVSECGDDFIYQ 248

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2119951 IQD25 "AT4G29150" [Arabidopsis thaliana (taxid:3702)]

 Score = 292 (107.8 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
 Identities = 69/169 (40%), Positives = 88/169 (52%)

Query:    56 LCYNPATIPPNMSPAEAAWIRSYYAT-ETEKEQNKHXXXXXXXXXXXXXXXXXXXXXXXX 114
             LC +  TIPPN+S  EAAW+RS+YA  E EKE+  H                        
Sbjct:    51 LCDSYETIPPNISEKEAAWLRSFYAAGEEEKERRTHAIAVAAATAAAADAAVAAAKAAAA 110

Query:   115 XXRLTSHGR-GTMFGGATHEKWAAVKIQSVFRGYXXXXXXXXXKGLVKLQAHVRGYLVRK 173
               RL   G+ G + GG + E  AA++IQ  FRGY         +G+VK+QA VRG+LVR 
Sbjct:   111 VVRLQGQGKSGPLGGGKSREHRAAMQIQCAFRGYLARKALRALRGVVKIQALVRGFLVRN 170

Query:   174 QTTATLHGMQALIRAQVTARSQRARACGGLTNNNSNRLESRARKSMERY 222
             Q  ATL  M+AL+RAQ T + QRA         N N   + ARKS ER+
Sbjct:   171 QAAATLRSMEALVRAQKTVKIQRA------LRRNGNA--APARKSTERF 211

GO:0005516 "calmodulin binding" evidence=ISS

TAIR|locus:2034011 IQD27 "AT1G51960" [Arabidopsis thaliana (taxid:3702)]

 Score = 231 (86.4 bits), Expect = 1.9e-20, Sum P(2) = 1.9e-20
 Identities = 82/300 (27%), Positives = 122/300 (40%)

Query:    81 TETEKEQNKHXXXXXXXXXXXXXXXXXXXXXXXXXXRLTSHGRGTMFGGATHEKWAAVKI 140
             T+TEK+QNK+                          RLTS GR         E+WAAVKI
Sbjct:    52 TDTEKDQNKNAIAVATATATAADAAVSAAVV-----RLTSEGRAGDIIITKEERWAAVKI 106

Query:   141 QSVFRGYXXXXXXXXXKGLVKLQAHVRGYLVRKQTTATLHGMQALIRAQVTARSQRARAC 200
             Q VFRG          KG+VKLQA VRGYLVRK+  A L  +Q LIR Q   RS+R    
Sbjct:   107 QKVFRGSLARKALRALKGIVKLQALVRGYLVRKRAAAMLQSIQTLIRVQTAMRSKRINR- 165

Query:   201 GGLTNNNSNRLESRARKSMERYDDETRSEQAAVSIHSRRLSASIDTTIDESPKIVEVDTG 260
               L    +N  + R  +S +++D+ T  ++    +          ++   S ++  V + 
Sbjct:   166 -SLNKEYNNMFQPR--QSFDKFDEATFDDRRTKIVEKDDRYMRRSSSRSRSRQVHNVVSM 222

Query:   261 SNRPKSRSRRTNTSVSDFSDDPHYQTISSPLPSRIYQCLSIPDGRNFQESDWGLTGDE-- 318
             S+       + N     FSD+      +   P R+    S  +     +S     G +  
Sbjct:   223 SDYEGDFVYKGNDLELCFSDEKWKFATAQNTP-RLLHHHSANNRYYVMQSPAKSVGGKAL 281

Query:   319 CKFSTAQSTPRFVSFDRSKAPATPAKSVCADNFFRQ-YNFPNYMANTKSFKAKLRSHSAP 377
             C + ++ STP ++   +S      + S       RQ  +    MA+  S      SH  P
Sbjct:   282 CDYESSVSTPGYMEKTKSFKAKVRSHSAPRQRSERQRLSLDEVMASKSSVSGVSMSHQHP 341

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2174088 IQD23 "AT5G62070" [Arabidopsis thaliana (taxid:3702)]

 Score = 248 (92.4 bits), Expect = 3.4e-19, P = 3.4e-19
 Identities = 91/272 (33%), Positives = 132/272 (48%)

Query:   122 GRGTMFG-GATHEKWA-----AVKIQSVFRGYXXXXXXXXXKGLVKLQAHVRGYLVRKQT 175
             G  ++F  G ++ +WA     A+KIQS FRGY         K LVKLQA VRG++VRKQT
Sbjct:    99 GNSSVFQIGRSNRRWAQENIAAMKIQSAFRGYLARRALRALKALVKLQALVRGHIVRKQT 158

Query:   176 TATLHGMQALIRAQVTARSQRARACGGLTNNNSNRLESRARKSMERYDDETRSEQAAVSI 235
                L  MQ L+R Q  AR++ +R+     +++S    S             RS      +
Sbjct:   159 ADMLRRMQTLVRLQSQARARASRS-----SHSSASFHSSTALLFPSSSSSPRS------L 207

Query:   236 HSRRLSASIDTTIDESPKIVEVDTGSNRPKSRSRRTNTSVSDFSDDPHYQTISSPLPSRI 295
             H+R +S +  +++D       +D  +   ++  +     V  +   PHY     P P R 
Sbjct:   208 HTRCVSNAEVSSLDHRGGSKRLDWQAEESENGDKILE--VDTWK--PHYH----PKPLRS 259

Query:   296 YQCLSIPDGRNFQESDWGLTGDECKFSTAQSTPRFVSFDRSKAPATP-AKSV----CADN 350
              +    P  R  Q+S   L G     ST  S     S  R + P TP ++S     C + 
Sbjct:   260 ERNNESP--RKRQQS---LLGPR---STENSPQVGSSGSRRRTPFTPTSRSEYSWGCNNY 311

Query:   351 FFRQYNFPNYMANTKSFKAKLRSHSAPKQRPE 382
             ++  Y+ PNYMANT+S+KAK+RS SAPKQR E
Sbjct:   312 YYSGYH-PNYMANTESYKAKVRSQSAPKQRVE 342

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2127243 IQD22 "AT4G23060" [Arabidopsis thaliana (taxid:3702)]

 Score = 222 (83.2 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
 Identities = 86/290 (29%), Positives = 135/290 (46%)

Query:   118 LTSHGRGTMFG-GATHEKWAAVKIQSVFRGYXXXXXXXXXKGLVKLQAHVRGYLVRKQTT 176
             + +HG    +G G    + A +KIQS+FRGY         KGLV+LQA VRG++ RK+ +
Sbjct:   151 VVAHG-SKFYGHGRDSCELAVIKIQSIFRGYLAKRALRALKGLVRLQAIVRGHIERKRMS 209

Query:   177 ATLHGMQALIRAQVTARSQRA----RACGGLTNNN-SNRLESRARKSMERYDDE--TRSE 229
               L  M AL+RAQ   R+ R      +    +NN  S+  ++    + E+ +    +RS 
Sbjct:   210 VHLRRMHALVRAQARVRATRVIVTPESSSSQSNNTKSSHFQNPGPPTPEKLEHSISSRSS 269

Query:   230 QAAVS-IHSRRLSASID------------TTIDESPKIVEVDTGSNRPKSRSRRTNTSVS 276
             + A S +  R  S + D            +  DE  KI+++D      K  S  T  +  
Sbjct:   270 KLAHSHLFKRNGSKASDNNRLYPAHRETFSATDEEEKILQIDR-----KHISSYTRRNRP 324

Query:   277 DFSDDPHYQTISSPLPSRIYQCLSIPDGRNFQESDWGLTGDECKFSTAQSTPRFVSF-DR 335
             D     H    ++ L   ++     P   + +E    +T   C   TA+++P+  S   R
Sbjct:   325 DMFYSSHLILDNAGLSEPVFATPFSPSSSH-EE----ITSQFC---TAENSPQLYSATSR 376

Query:   336 SKAPATPAKSVCADNFFRQY---NFPNYMANTKSFKAKLRSHSAPKQRPE 382
             SK  A  A S+   +  +     + P+YMA T+S +AK RS SAPK RP+
Sbjct:   377 SKRSAFTASSIAPSDCTKSCCDGDHPSYMACTESSRAKARSASAPKSRPQ 426

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0009739 "response to gibberellin stimulus" evidence=IEP

TAIR|locus:2100504 IQD3 "AT3G52290" [Arabidopsis thaliana (taxid:3702)]

 Score = 183 (69.5 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
 Identities = 53/206 (25%), Positives = 91/206 (44%)

Query:    82 ETEKEQNKHXXXXXXXXXXXXXXXXXXXXXXXXXXRLTSHGRGTMFGGATHEKWAAVKIQ 141
             E E++Q++H                          RL++  R   F G + E+ AA+KIQ
Sbjct:    59 EIEEQQSRHAYSVAIATAAAAEAAVAAAQAAAEVVRLSALSR---FPGKSMEEIAAIKIQ 115

Query:   142 SVFRGYXXXXXXXXXKGLVKLQAHVRGYLVRKQTTATLHGMQALIRAQVTARSQRARACG 201
             + FRGY         +GLV+L++ V+G  VR+Q T+TL  MQ L R Q   R +R R   
Sbjct:   116 TAFRGYMARRALRALRGLVRLKSLVQGKCVRRQATSTLQSMQTLARVQYQIRERRLRLSE 175

Query:   202 ---GLTNNNSNRLESRARKSMERYDDETRSEQAAVSIHSRRLSASIDTTIDESPKIVEVD 258
                 LT     +      K+ E ++D T S +    + +  L+  +  T+     +    
Sbjct:   176 DKQALTRQLQQKHNKDFDKTGENWNDSTLSRE---KVEANMLNKQV-ATMRREKALAYAF 231

Query:   259 TGSNRPKSRSRRTNTSVSDFSDDPHY 284
             +  N  K+ ++  + +  D  ++PH+
Sbjct:   232 SHQNTWKNSTKMGSQTFMD-PNNPHW 256

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2130200 IQD19 "AT4G14750" [Arabidopsis thaliana (taxid:3702)]

 Score = 197 (74.4 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
 Identities = 48/121 (39%), Positives = 68/121 (56%)

Query:   133 EKWAAVKIQSVFRGYXXXXXXXXXKGLVKLQAHVRGYLVRKQTTATLHGMQALIRAQVTA 192
             E++AA+KIQ+ +R +         KGLVKLQA VRG+LVRKQ TATL  MQALI  Q  A
Sbjct:   104 EEFAAIKIQACYRSHLARKALRALKGLVKLQALVRGHLVRKQATATLRCMQALITLQAKA 163

Query:   193 RSQRARACGGLTNNNSNRLESRARKSMERYDDETRSEQAAVSIHSRRLSASIDTTIDESP 252
             R QR R  GG + N    +  + R +   +++E   +   + I S+  S +     + SP
Sbjct:   164 REQRIRMIGGDSTNPRTSIH-KTRINNFYHENEENIKIVEMDIQSKMYSPAPSALTEMSP 222

Query:   253 K 253
             +
Sbjct:   223 R 223

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2090409 IQD5 "AT3G22190" [Arabidopsis thaliana (taxid:3702)]

 Score = 172 (65.6 bits), Expect = 1.3e-12, Sum P(3) = 1.3e-12
 Identities = 48/134 (35%), Positives = 69/134 (51%)

Query:   118 LTSHGRGTMFGGATHEKWAAVKIQSVFRGYXXXXXXXXXKGLVKLQAHVRGYLVRKQTTA 177
             L S+G G  +   + E  AA +IQ+ +RG+         KGLV+LQA VRG+ VRKQ   
Sbjct:    73 LQSYG-GVAYDEQSRENRAATRIQTAYRGFLARRALRALKGLVRLQALVRGHAVRKQAAV 131

Query:   178 TLHGMQALIRAQVTARSQRARACGGLTNNNSNRL-------ESRARKSMERYDDETRS-E 229
             TL  MQAL+R Q   R++R R    L +  S +        E+R R+  E + D   S E
Sbjct:   132 TLRCMQALVRVQARVRARRVRLALELESETSQQTLQQQLADEARVREIEEGWCDSIGSVE 191

Query:   230 QAAVSIHSRRLSAS 243
             Q    +  R+ +A+
Sbjct:   192 QIQAKLLKRQEAAA 205

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2057459 IQD6 "AT2G26180" [Arabidopsis thaliana (taxid:3702)]

 Score = 170 (64.9 bits), Expect = 1.3e-12, Sum P(3) = 1.3e-12
 Identities = 34/69 (49%), Positives = 44/69 (63%)

Query:   130 ATHEKWAAVKIQSVFRGYXXXXXXXXXKGLVKLQAHVRGYLVRKQTTATLHGMQALIRAQ 189
             A  E+WAA++IQ+ FRG+         KG+V+LQA VRG  VRKQ   TL  MQAL+R Q
Sbjct:    80 AVREEWAAIRIQTAFRGFLARRALRALKGIVRLQALVRGRQVRKQAAVTLRCMQALVRVQ 139

Query:   190 VTARSQRAR 198
                R++R R
Sbjct:   140 ARVRARRVR 148

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2097478 IQD13 "AT3G59690" [Arabidopsis thaliana (taxid:3702)]

 Score = 154 (59.3 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
 Identities = 36/109 (33%), Positives = 59/109 (54%)

Query:   137 AVKIQSVFRGYXXXXXXXXXKGLVKLQAHVRGYLVRKQTTATLHGMQALIRAQVTARSQR 196
             A+KIQ+ FRGY         KGLV+LQ  VRG+ V++QT   +  MQ L+R Q   +S+R
Sbjct:   172 AIKIQAAFRGYMARRSFRALKGLVRLQGVVRGHSVKRQTMNAMKYMQLLVRVQTQVQSRR 231

Query:   197 ARACGGLTNNNSNRLESRARKSMERYDDETRS-EQAAVSIHSRRLSASI 244
              +       N+ +  +  + +  + +DD   + E+  V +H R++ A I
Sbjct:   232 IQMLENRARNDKDDTKLVSSRMSDDWDDSVLTKEEKDVRLH-RKIDAMI 279

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0005886 "plasma membrane" evidence=IDA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	447
pfam13178	105	pfam13178, DUF4005, Protein of unknown function (D	2e-15
pfam00612	21	pfam00612, IQ, IQ calmodulin-binding motif	0.001

>gnl|CDD|221960 pfam13178, DUF4005, Protein of unknown function (DUF4005)

 Score = 71.4 bits (175), Expect = 2e-15
 Identities = 39/105 (37%), Positives = 49/105 (46%), Gaps = 19/105 (18%)

Query: 326 STPRFVSFDRSKAPAT----PAKSVCADNFFRQY-NFPNYMANTKSFKAKLRSHSAPKQR 380
           +TPR +S   SK+  +    P KS   DN      + PNYMA T+S KAK+RS SAP+QR
Sbjct: 1   NTPRLLSSSSSKSSRSSPSNPTKSERDDNSSTSSPSLPNYMAATESAKAKVRSQSAPRQR 60

Query: 381 PEPGP-------KRRLSL-------NEMMESRSSLSGIRMQRSCS 411
           PE           +RLSL            S  +  G    RS S
Sbjct: 61  PETEERESGSSATKRLSLPVSSSSGGSSSSSPRTSGGKGALRSPS 105

This is a C-terminal region of plant IQ-containing putative calmodulin-binding proteins. Length = 105

>gnl|CDD|201341 pfam00612, IQ, IQ calmodulin-binding motif

 Score = 35.8 bits (84), Expect = 0.001
 Identities = 11/19 (57%), Positives = 16/19 (84%)

Query: 136 AAVKIQSVFRGYLARRALR 154
           AA+KIQ+ +RGYLAR+  +
Sbjct: 3   AAIKIQAAWRGYLARKRYK 21

Calmodulin-binding motif. Length = 21

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	447
PF13178	102	DUF4005: Protein of unknown function (DUF4005)	99.65
PF00612	21	IQ: IQ calmodulin-binding motif; InterPro: IPR0000	97.91
KOG0160	862	consensus Myosin class V heavy chain [Cytoskeleton	97.69
smart00015	26	IQ Short calmodulin-binding motif containing conse	97.38
KOG0160	862	consensus Myosin class V heavy chain [Cytoskeleton	97.24
PTZ00014	821	myosin-A; Provisional	96.76
PF00612	21	IQ: IQ calmodulin-binding motif; InterPro: IPR0000	96.63
KOG0520	975	consensus Uncharacterized conserved protein, conta	96.47
KOG2128	1401	consensus Ras GTPase-activating protein family - I	96.05
KOG0164	1001	consensus Myosin class I heavy chain [Cytoskeleton	95.9
smart00015	26	IQ Short calmodulin-binding motif containing conse	95.04
PTZ00014	821	myosin-A; Provisional	93.98
COG5022	1463	Myosin heavy chain [Cytoskeleton]	93.88
KOG2128	1401	consensus Ras GTPase-activating protein family - I	86.83
KOG0520	975	consensus Uncharacterized conserved protein, conta	86.77
KOG0161	1930	consensus Myosin class II heavy chain [Cytoskeleto	82.36

>PF13178 DUF4005: Protein of unknown function (DUF4005)

Probab=99.65  E-value=1.2e-16  Score=137.35  Aligned_cols=67  Identities=46%  Similarity=0.689  Sum_probs=50.9

Q ss_pred             CCCCcccCCC----CCCCCCCCcccccccccCCCCCcccccccccccchhccCCCCCCCCCC-------CCccccchhhh
Q 013213          326 STPRFVSFDR----SKAPATPAKSVCADNFFRQYNFPNYMANTKSFKAKLRSHSAPKQRPEP-------GPKRRLSLNEM  394 (447)
Q Consensus       326 ssP~~~s~~~----~~~p~tp~ks~~~~~~~~~~~~PNYMAnTESSkAKvRSQSAPKQRPet-------~~rkR~sl~~~  394 (447)
                      |||||.+...    .....++.+.+|.++.+.  .+|||||+|||+|||+||||||||||+.       ..++|+||+..
T Consensus         1 nsPr~~s~~~~~~~~~~~~s~~~~~~~~~s~~--~~PsYMa~TeSakAK~RsqSaPrqR~~~~~~~~~~~~~kR~S~~~~   78 (102)
T PF13178_consen    1 NSPRLRSASSRSSSSPSRSSPQKSSCRRSSFG--SLPSYMAATESAKAKARSQSAPRQRPGTPERAEKQSSKKRLSLPGS   78 (102)
T ss_pred             CCCCccCcccCCCCCcccCCCcccccccCcCC--CCCCccchhhhhhhhhhccCCcccCCCccccccccccccccccCCC
Confidence            6788665421    223345667777777665  3999999999999999999999999986       35789998754

>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K

Probab=97.91  E-value=1.2e-05  Score=50.80  Aligned_cols=21  Identities=52%  Similarity=0.816  Sum_probs=18.4

Q ss_pred             HHHHHHHHHhhhhHHHHHHHH
Q 013213          134 KWAAVKIQSVFRGYLARRALR  154 (447)
Q Consensus       134 e~AAIkIQsafRGylaRKa~r  154 (447)
                      +.|||.||+.||||++|+.|+
T Consensus         1 ~~aai~iQ~~~R~~~~Rk~~k   21 (21)
T PF00612_consen    1 RKAAIIIQSYWRGYLARKRYK   21 (21)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHhcC
Confidence            368999999999999999885

The IQ motif, which can be present in one or more copies, serves as a binding site for different EF-hand proteins including the essential and regulatory myosin light chains, calmodulin (CaM), and CaM-like proteins [, ].Many IQ motifs are protein kinase C (PKC) phosphorylation sites [, ]. Resolution of the 3D structure of scallop myosin has shown that the IQ motif forms a basic amphipathic helix []. Some proteins known to contain an IQ motif are listed below: A number of conventional and unconventional myosins. Neuromodulin (GAP-43). This protein is associated with nerve growth. It is a major component of the motile "growth cones" that form the tips of elongating axons. Neurogranin (NG/p17). Acts as a "third messenger" substrate of protein kinase C-mediated molecular cascades during synaptic development and remodeling. Sperm surface protein Sp17. Ras GTPase-activating-like protein IQGAP1. IQGAP1 contains 4 IQ motifs. This entry covers the entire IQ motif.; GO: 0005515 protein binding; PDB: 2DFS_A 2IX7_C 1OE9_A 1W7J_A 1W7I_A 1KQM_A 1KK7_A 1WDC_A 1DFL_A 1B7T_A ....

>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton]

Probab=97.69  E-value=0.00011  Score=83.28  Aligned_cols=63  Identities=38%  Similarity=0.409  Sum_probs=53.0

Q ss_pred             HHHHHHHHHHhhhhHHHHHHHHHH-HHHHHHHHHHhhHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHh
Q 013213          133 EKWAAVKIQSVFRGYLARRALRAL-KGLVKLQAHVRGYLVRKQTTATLHGMQALIRAQVTARSQRARA  199 (447)
Q Consensus       133 ee~AAIkIQsafRGylaRKa~ral-r~iVkLQAlvRG~lvRRq~~~~l~~~qA~vkIQa~iR~~raRr  199 (447)
                      ...+++.||+.||||+.|+.|..+ ++++.||+++||++.|+   ..+ ...+++.||..+|++..|+
T Consensus       672 l~~~~~~iq~~~r~~~~r~~f~~~r~~~~~~Q~~~rG~~~r~---~~~-~~~aai~~q~~~r~~~~r~  735 (862)
T KOG0160|consen  672 LSAAKVLIQRQIRGYLARKKFLQLRSAVIIIQAYSRGVLARR---ETE-REAAAIGIQKECRSYLNRR  735 (862)
T ss_pred             HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH---hhH-HHHHHHHhHHHHHHHHHHH
Confidence            446788899999999999999999 68999999999999999   222 4567778888888888776

>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues

Probab=97.38  E-value=0.00015  Score=47.86  Aligned_cols=22  Identities=45%  Similarity=0.727  Sum_probs=19.3

Q ss_pred             HHHHHHHHHHhhhhHHHHHHHH
Q 013213          133 EKWAAVKIQSVFRGYLARRALR  154 (447)
Q Consensus       133 ee~AAIkIQsafRGylaRKa~r  154 (447)
                      ++.+|++||+.||||++|+.|+
T Consensus         2 ~~~aa~~IQa~~Rg~~~r~~y~   23 (26)
T smart00015        2 LTRAAIIIQAAWRGYLARKRYK   23 (26)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhh
Confidence            4688999999999999999884

Calmodulin-binding motif.

>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton]

Probab=97.24  E-value=0.00052  Score=77.86  Aligned_cols=79  Identities=29%  Similarity=0.320  Sum_probs=62.9

Q ss_pred             cccCCCCCCcCc-chhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhHhHHHHHHHHHHHHH
Q 013213          118 LTSHGRGTMFGG-ATHEKWAAVKIQSVFRGYLARRALRALKGLVKLQAHVRGYLVRKQTTATLHGMQALIRAQVTARSQR  196 (447)
Q Consensus       118 lt~~~r~~~~~~-~~ree~AAIkIQsafRGylaRKa~ralr~iVkLQAlvRG~lvRRq~~~~l~~~qA~vkIQa~iR~~r  196 (447)
                      ++...++++... +.....+++.||+.+||+++|+......+.+.||..+|+++.|++|....   .+++.||+.+|+..
T Consensus       679 iq~~~r~~~~r~~f~~~r~~~~~~Q~~~rG~~~r~~~~~~~aai~~q~~~r~~~~r~~y~~~~---~~~~~~qs~~r~~~  755 (862)
T KOG0160|consen  679 IQRQIRGYLARKKFLQLRSAVIIIQAYSRGVLARRETEREAAAIGIQKECRSYLNRRRYRALI---PASITIQSGVRAML  755 (862)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHH
Confidence            444444443311 45677899999999999999984443378999999999999999996655   58999999999999


Q ss_pred             HHh
Q 013213          197 ARA  199 (447)
Q Consensus       197 aRr  199 (447)
                      +|.
T Consensus       756 ~r~  758 (862)
T KOG0160|consen  756 ARN  758 (862)
T ss_pred             hcc
Confidence            986

>PTZ00014 myosin-A; Provisional

Probab=96.76  E-value=0.0019  Score=73.42  Aligned_cols=40  Identities=28%  Similarity=0.338  Sum_probs=32.9

Q ss_pred             HHHHHHHHhhhhHHHHHHHHHH-HHHHHHHHHHhhHHHHHH
Q 013213          135 WAAVKIQSVFRGYLARRALRAL-KGLVKLQAHVRGYLVRKQ  174 (447)
Q Consensus       135 ~AAIkIQsafRGylaRKa~ral-r~iVkLQAlvRG~lvRRq  174 (447)
                      ..++.||++||||++|+.|+.+ .+++.||+.+|||++++.
T Consensus       778 ~~~~~iq~~~r~~~~r~~~~~~~~~~~~iQ~~~R~~l~~~~  818 (821)
T PTZ00014        778 PLVSVLEALILKIKKKRKVRKNIKSLVRIQAHLRRHLVIAE  818 (821)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            3677888888888888888887 688888888888888875

>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K

Probab=96.63  E-value=0.0025  Score=40.17  Aligned_cols=20  Identities=40%  Similarity=0.602  Sum_probs=17.7

Q ss_pred             HHHHHHHHHHhhHHHHHHHH
Q 013213          157 KGLVKLQAHVRGYLVRKQTT  176 (447)
Q Consensus       157 r~iVkLQAlvRG~lvRRq~~  176 (447)
                      +++|.||+.|||+++|++|.
T Consensus         2 ~aai~iQ~~~R~~~~Rk~~k   21 (21)
T PF00612_consen    2 KAAIIIQSYWRGYLARKRYK   21 (21)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcC
Confidence            47899999999999999873

The IQ motif, which can be present in one or more copies, serves as a binding site for different EF-hand proteins including the essential and regulatory myosin light chains, calmodulin (CaM), and CaM-like proteins [, ].Many IQ motifs are protein kinase C (PKC) phosphorylation sites [, ]. Resolution of the 3D structure of scallop myosin has shown that the IQ motif forms a basic amphipathic helix []. Some proteins known to contain an IQ motif are listed below: A number of conventional and unconventional myosins. Neuromodulin (GAP-43). This protein is associated with nerve growth. It is a major component of the motile "growth cones" that form the tips of elongating axons. Neurogranin (NG/p17). Acts as a "third messenger" substrate of protein kinase C-mediated molecular cascades during synaptic development and remodeling. Sperm surface protein Sp17. Ras GTPase-activating-like protein IQGAP1. IQGAP1 contains 4 IQ motifs. This entry covers the entire IQ motif.; GO: 0005515 protein binding; PDB: 2DFS_A 2IX7_C 1OE9_A 1W7J_A 1W7I_A 1KQM_A 1KK7_A 1WDC_A 1DFL_A 1B7T_A ....

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]

Probab=96.47  E-value=0.0018  Score=74.01  Aligned_cols=68  Identities=35%  Similarity=0.455  Sum_probs=54.7

Q ss_pred             hHHHHHHHHHHhhhhHHHHHHHHHH-HHHHHHHHHHhhHHHHHHHHHHHHhH-------hHHHHHHHHHHHHHHHh
Q 013213          132 HEKWAAVKIQSVFRGYLARRALRAL-KGLVKLQAHVRGYLVRKQTTATLHGM-------QALIRAQVTARSQRARA  199 (447)
Q Consensus       132 ree~AAIkIQsafRGylaRKa~ral-r~iVkLQAlvRG~lvRRq~~~~l~~~-------qA~vkIQa~iR~~raRr  199 (447)
                      ....||..||..||||+.|+.|..+ .-+|+||+.+|||.+|++|....+..       -++=++|+-+|+++.+.
T Consensus       808 ~~~~aa~~iq~~f~~yk~r~~~l~tr~p~v~iqa~~rg~q~r~dy~ki~wSv~~lek~~lrwR~k~~g~Rgfk~~~  883 (975)
T KOG0520|consen  808 SDPAAASRIQKKFRGYKQRKEFLSTRQPIVKIQAAVRGYQVRKDYRKITWSVGVLEKLILRWRRKGKGFRGFKGRA  883 (975)
T ss_pred             cchhHHHHhhhhhhhHHhhhhhcccCCccccchhhhhchhHhhhhheechhhhHHHHHHHHHHHhhhhhccccccc
Confidence            4567999999999999999999999 57999999999999999998655543       33344666666666554

>KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms]

Probab=96.05  E-value=0.013  Score=69.22  Aligned_cols=86  Identities=29%  Similarity=0.367  Sum_probs=65.6

Q ss_pred             hhhhcccCCCCCCcCc--------chhHHHHHHHHHHhhhhHHH---HHHHHHH--HHHHHHHHHHhhHHHHHHHHHHHH
Q 013213          114 AVVRLTSHGRGTMFGG--------ATHEKWAAVKIQSVFRGYLA---RRALRAL--KGLVKLQAHVRGYLVRKQTTATLH  180 (447)
Q Consensus       114 ~vvrlt~~~r~~~~~~--------~~ree~AAIkIQsafRGyla---RKa~ral--r~iVkLQAlvRG~lvRRq~~~~l~  180 (447)
                      ...+.|+.+||+.+..        ........+.||.+||||+.   +..|..-  +-||++|++.||+++|+.+...++
T Consensus       537 ~~~~~qa~~rg~~~r~~~~~~~~fl~~~~P~~~diq~~vr~~~~~~~~~~~~~~~~~evv~~qs~~R~~lsrk~~~~~~q  616 (1401)
T KOG2128|consen  537 EKLRIQASERGFSTRNKFRSRLDFLKKQTPFVVDIQALVRGILQYIPRDVYLDSAKKEVVKFQSLTRGALSRKKYSRKLQ  616 (1401)
T ss_pred             cchhhhhhccccchHHHHHhhhhHHHhcCchHHHHHHHHHHHhhhchHHHHHHHhhHHHHHHHHHHHHHHHHhhHHHHHH
Confidence            3444577788865421        23467889999999999995   2222222  689999999999999998875554


Q ss_pred             ----hHhHHHHHHHHHHHHHHHh
Q 013213          181 ----GMQALIRAQVTARSQRARA  199 (447)
Q Consensus       181 ----~~qA~vkIQa~iR~~raRr  199 (447)
                          +|..+++||+.+|....|.
T Consensus       617 ~~~~~~~~~i~iqs~~r~f~~r~  639 (1401)
T KOG2128|consen  617 YFKDNMTKIIKIQSKIRKFPNRK  639 (1401)
T ss_pred             HHHHhhhhHHHHHHHHHhcccch
Confidence                5899999999999999987

>KOG0164 consensus Myosin class I heavy chain [Cytoskeleton]

Probab=95.90  E-value=0.028  Score=62.96  Aligned_cols=55  Identities=22%  Similarity=0.326  Sum_probs=42.2

Q ss_pred             HHHHHHHHHhhhhHHHHHHHHHHHH-HHHHHHHHhhHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHh
Q 013213          134 KWAAVKIQSVFRGYLARRALRALKG-LVKLQAHVRGYLVRKQTTATLHGMQALIRAQVTARSQRARA  199 (447)
Q Consensus       134 e~AAIkIQsafRGylaRKa~ralr~-iVkLQAlvRG~lvRRq~~~~l~~~qA~vkIQa~iR~~raRr  199 (447)
                      -.-|+.||++||||++|..|+.++. ++.|+ .+|.|.++-          .+..||.++|+.+.++
T Consensus       696 ~~lvtllQK~~RG~~~R~ry~rmka~~~ii~-wyR~~K~ks----------~v~el~~~~rg~k~~r  751 (1001)
T KOG0164|consen  696 PSLVTLLQKAWRGWLARQRYRRMKASATIIR-WYRRYKLKS----------YVQELQRRFRGAKQMR  751 (1001)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH----------HHHHHHHHHHhhhhcc
Confidence            3578999999999999999999965 44445 667443332          3456899999999887

>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues

Probab=95.04  E-value=0.025  Score=37.25  Aligned_cols=19  Identities=42%  Similarity=0.670  Sum_probs=17.5

Q ss_pred             HHHHHHHHHHhhHHHHHHH
Q 013213          157 KGLVKLQAHVRGYLVRKQT  175 (447)
Q Consensus       157 r~iVkLQAlvRG~lvRRq~  175 (447)
                      +.++.||+.+||+++|++|
T Consensus         4 ~aa~~IQa~~Rg~~~r~~y   22 (26)
T smart00015        4 RAAIIIQAAWRGYLARKRY   22 (26)
T ss_pred             HHHHHHHHHHHHHHHHHhh
Confidence            5789999999999999988

Calmodulin-binding motif.

>PTZ00014 myosin-A; Provisional

Probab=93.98  E-value=0.14  Score=58.72  Aligned_cols=39  Identities=18%  Similarity=0.207  Sum_probs=34.6

Q ss_pred             HHHHHHHHHhhHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHh
Q 013213          158 GLVKLQAHVRGYLVRKQTTATLHGMQALIRAQVTARSQRARA  199 (447)
Q Consensus       158 ~iVkLQAlvRG~lvRRq~~~~l~~~qA~vkIQa~iR~~raRr  199 (447)
                      .++.||+.|||++.|++|..+   .++++.||+.+|++..++
T Consensus       779 ~~~~iq~~~r~~~~r~~~~~~---~~~~~~iQ~~~R~~l~~~  817 (821)
T PTZ00014        779 LVSVLEALILKIKKKRKVRKN---IKSLVRIQAHLRRHLVIA  817 (821)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHh
Confidence            567899999999999999665   468999999999999887

>COG5022 Myosin heavy chain [Cytoskeleton]

Probab=93.88  E-value=0.11  Score=61.88  Aligned_cols=42  Identities=29%  Similarity=0.363  Sum_probs=30.7

Q ss_pred             HHHHHHHHHHhhhhHHHHHHHHHH-HHHHHHHHHHhhHHHHHH
Q 013213          133 EKWAAVKIQSVFRGYLARRALRAL-KGLVKLQAHVRGYLVRKQ  174 (447)
Q Consensus       133 ee~AAIkIQsafRGylaRKa~ral-r~iVkLQAlvRG~lvRRq  174 (447)
                      -...++.||++|||++.|+.|..- +.+..+|.+.+|.++++.
T Consensus       744 ~~~~~~~iq~aiR~~~~rrr~~~~~k~i~~~~~~~~~~~~~~~  786 (1463)
T COG5022         744 LDNIATRIQRAIRGRYLRRRYLQALKRIKKIQVIQHGFRLRRL  786 (1463)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhh
Confidence            346899999999999999988776 555555555555555543

>KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms]

Probab=86.83  E-value=1.2  Score=53.52  Aligned_cols=59  Identities=27%  Similarity=0.325  Sum_probs=48.2

Q ss_pred             HHHHhhhhHHHHHHHHHHH--------HHHHHHHHHhhHHHHHHHHHHH----HhHhHHHHHHHHHHHHHHHhc
Q 013213          139 KIQSVFRGYLARRALRALK--------GLVKLQAHVRGYLVRKQTTATL----HGMQALIRAQVTARSQRARAC  200 (447)
Q Consensus       139 kIQsafRGylaRKa~ralr--------~iVkLQAlvRG~lvRRq~~~~l----~~~qA~vkIQa~iR~~raRr~  200 (447)
                      +||+..||+..|-+++...        .++.||++|||+++   |....    ....-+|++|+..|+...|+.
T Consensus       540 ~~qa~~rg~~~r~~~~~~~~fl~~~~P~~~diq~~vr~~~~---~~~~~~~~~~~~~evv~~qs~~R~~lsrk~  610 (1401)
T KOG2128|consen  540 RIQASERGFSTRNKFRSRLDFLKKQTPFVVDIQALVRGILQ---YIPRDVYLDSAKKEVVKFQSLTRGALSRKK  610 (1401)
T ss_pred             hhhhhccccchHHHHHhhhhHHHhcCchHHHHHHHHHHHhh---hchHHHHHHHhhHHHHHHHHHHHHHHHHhh
Confidence            4499999999999988772        78899999999997   43222    234789999999999999986

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]

Probab=86.77  E-value=0.65  Score=53.99  Aligned_cols=67  Identities=27%  Similarity=0.340  Sum_probs=49.5

Q ss_pred             HHHHHHHHHHhhhhHHHHHHHHHH-HH----------HHHHHHHHhhHHHHHHHH----------------------HHH
Q 013213          133 EKWAAVKIQSVFRGYLARRALRAL-KG----------LVKLQAHVRGYLVRKQTT----------------------ATL  179 (447)
Q Consensus       133 ee~AAIkIQsafRGylaRKa~ral-r~----------iVkLQAlvRG~lvRRq~~----------------------~~l  179 (447)
                      -..-+|+||+++|||..|+.|+.| .+          .-++|.-+||+..|....                      ...
T Consensus       832 tr~p~v~iqa~~rg~q~r~dy~ki~wSv~~lek~~lrwR~k~~g~Rgfk~~~~~e~~~~a~t~~e~~yd~yKq~~~~~~~  911 (975)
T KOG0520|consen  832 TRQPIVKIQAAVRGYQVRKDYRKITWSVGVLEKLILRWRRKGKGFRGFKGRALFEEQETAATVIEDCYDFYKQLRKQTEE  911 (975)
T ss_pred             cCCccccchhhhhchhHhhhhheechhhhHHHHHHHHHHHhhhhhcccccccchhccccccchHHHHHHHHHHHHHHHHH
Confidence            346789999999999999999988 21          124588899988775321                      011


Q ss_pred             HhHhHHHHHHHHHHHHHHHh
Q 013213          180 HGMQALIRAQVTARSQRARA  199 (447)
Q Consensus       180 ~~~qA~vkIQa~iR~~raRr  199 (447)
                      +--+|+++||+.+|...++.
T Consensus       912 r~~~A~~~VQsm~rs~~a~q  931 (975)
T KOG0520|consen  912 RLTRAVVRVQSMFRSPKAQQ  931 (975)
T ss_pred             HHHHHHHHHHHHhcCHHHHH
Confidence            11389999999999998884

>KOG0161 consensus Myosin class II heavy chain [Cytoskeleton]

Probab=82.36  E-value=3.4  Score=51.62  Aligned_cols=43  Identities=28%  Similarity=0.346  Sum_probs=36.0

Q ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHh
Q 013213          157 KGLVKLQAHVRGYLVRKQTTATLHGMQALIRAQVTARSQRARA  199 (447)
Q Consensus       157 r~iVkLQAlvRG~lvRRq~~~~l~~~qA~vkIQa~iR~~raRr  199 (447)
                      .-|+.+||.||||++|+.|...+..+.++..||.-+|.+...+
T Consensus       774 ~ii~~fQA~~Rg~l~r~~~~kr~~~~~ai~~iQ~N~r~~~~lr  816 (1930)
T KOG0161|consen  774 QIITLFQAAIRGYLARKEFKKRLQQLDAIKVIQRNIRAYLKLR  816 (1930)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            3677789999999999988888888889989999998886555

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	447
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	1e-08
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	2e-08
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	7e-06
2ix7_C	58	Myosin-5A; contractIle protein/metal binding, acti	3e-08
1kk8_A	837	Myosin heavy chain, striated muscle; actin-detache	1e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-06
2ycu_A	995	Non muscle myosin 2C, alpha-actinin; motor protein	4e-06
2ycu_A	995	Non muscle myosin 2C, alpha-actinin; motor protein	2e-05
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	7e-06
1g8x_A	1010	Myosin II heavy chain fused to alpha-actinin 3; mo	5e-04

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080

 Score = 56.3 bits (136), Expect = 1e-08
 Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 3/105 (2%)

Query: 136 AAVKIQSVFRGYLARRA-LRALKGLVKLQAHVRGYLVRKQTTATLHGMQALIRAQVTARS 194
           A ++IQ   RG+L R+  +R  +  + +Q +VRG+  R   T  L   +A I  Q   R 
Sbjct: 770 ACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARCYATF-LRRTRAAIIIQKFQRM 828

Query: 195 QRARACGGLTNNNSNRLESRARKSMER-YDDETRSEQAAVSIHSR 238
              R       + +  L++  R  + R        E  ++ I   
Sbjct: 829 YVVRKRYQCMRDATIALQALLRGYLVRNKYQMMLREHKSIIIQKH 873

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080

 Score = 55.9 bits (135), Expect = 2e-08
 Identities = 31/116 (26%), Positives = 47/116 (40%), Gaps = 11/116 (9%)

Query: 134 KWAAVKIQSVFRGYLARR---ALRALKGLVKLQAHVRGYLVRKQTTATLHGMQALIRAQV 190
           + AA+ IQ   RG+ AR     LR  +  + +Q   R Y+VRK+         A I  Q 
Sbjct: 791 RRAAITIQRYVRGHQARCYATFLRRTRAAIIIQKFQRMYVVRKRYQCMRD---ATIALQA 847

Query: 191 TARSQRARACGG--LTNNNSNRLESRARKSMERYDDETRSEQAAVSIHS--RRLSA 242
             R    R      L  + S  ++   R  + R     R+ +A V +    RR+ A
Sbjct: 848 LLRGYLVRNKYQMMLREHKSIIIQKHVRGWLAR-VHYHRTLKAIVYLQCCYRRMMA 902

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080

 Score = 47.8 bits (114), Expect = 7e-06
 Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 2/119 (1%)

Query: 133 EKWAAVKIQSVFRGYLARRALRALK-GLVKLQAHVRGYLVRKQTTATLHGMQALIRAQVT 191
              AA+ IQ   R Y+ R+  + ++   + LQA +RGYLVR +    L   +++I  Q  
Sbjct: 815 RTRAAIIIQKFQRMYVVRKRYQCMRDATIALQALLRGYLVRNKYQMMLREHKSII-IQKH 873

Query: 192 ARSQRARACGGLTNNNSNRLESRARKSMERYDDETRSEQAAVSIHSRRLSASIDTTIDE 250
            R   AR     T      L+   R+ M + + +    +A      ++L   ++  I +
Sbjct: 874 VRGWLARVHYHRTLKAIVYLQCCYRRMMAKRELKKLKIEARSVERYKKLHIGLENKIMQ 932

>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58

 Score = 48.7 bits (117), Expect = 3e-08
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 136 AAVKIQSVFRGYLARRA-LRALKGLVKLQAHVRGYLVRKQ 174
           A ++IQ   RG+L R+  L   +  + +Q +VRGY  R  
Sbjct: 7   ACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCY 46

>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ... Length = 837

 Score = 50.0 bits (120), Expect = 1e-06
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 4/43 (9%)

Query: 136 AAVKIQSVFRGYLARRALRALK----GLVKLQAHVRGYLVRKQ 174
                Q+  RGYL R+A + L+    GL  +Q ++R +LV + 
Sbjct: 781 IISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRN 823

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.1 bits (116), Expect = 2e-06
 Identities = 60/386 (15%), Positives = 98/386 (25%), Gaps = 142/386 (36%)

Query: 142 SVFRGYLARR-----ALRALKGLVKLQAHVRGYLVRKQTTATLHGM-----QALIRAQVT 191
            VF  Y   R      LR  + L++L+      +        + G+       +  A   
Sbjct: 124 QVFAKYNVSRLQPYLKLR--QALLELRPA--KNV-------LIDGVLGSGKTWV--ALDV 170

Query: 192 ARS---QRARACG----GLTNNNS--------NRLESRARKSMERYDDETRSEQAAVSIH 236
             S   Q           L N NS         +L  +   +     D   S    + IH
Sbjct: 171 CLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSD--HSSNIKLRIH 228

Query: 237 S-----RRLSAS--------IDTTIDE--SPKIVEV-DTGSNRPKSRSRRT-----NTSV 275
           S     RRL  S        +   +    + K     +           +         V
Sbjct: 229 SIQAELRRLLKSKPYENCLLV---LLNVQNAKAWNAFNLSC--------KILLTTRFKQV 277

Query: 276 SDFSDDPHYQTISSPLPSRIYQCLSIPDGRNFQESDWGLTGDECK--FSTAQSTPRFVSF 333
           +DF        IS                         LT DE K          +++  
Sbjct: 278 TDFLSAATTTHISL------------------DHHSMTLTPDEVKSLLL------KYLDC 313

Query: 334 DRSKAPA-----TP-AKSVCAD---------NFFRQYNFPNYMANTKSFKAKLRSHSAPK 378
                P       P   S+ A+         + ++  N       T   ++ L      +
Sbjct: 314 RPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKL---TTIIESSLNVLEPAE 370

Query: 379 QR---------PE--PGPKRRLSL-------NEMMESRSSLSGIRMQRSCSQAQEVISFK 420
            R         P     P   LSL       +++M   + L     + S  + Q     K
Sbjct: 371 YRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKL----HKYSLVEKQ----PK 422

Query: 421 NTVIGKLDRSTELCREPERNNYVQRK 446
            + I       EL  + E    + R 
Sbjct: 423 ESTISIPSIYLELKVKLENEYALHRS 448

>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* Length = 995

 Score = 48.1 bits (115), Expect = 4e-06
 Identities = 12/107 (11%), Positives = 32/107 (29%), Gaps = 9/107 (8%)

Query: 138 VKIQSVFRGYLARRA----LRALKGLVKLQAHVRGYLVRKQTTATLHGMQALIRAQVTAR 193
            +   + +    ++A          +  +Q+ +  +   K+ T      Q +   +    
Sbjct: 765 KRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKK-TEKPPKGQEVSELEAIYN 823

Query: 194 SQRARACGGLTNNNSNRLESRARKSMERYDDETRSEQAAVSIHSRRL 240
           S + +    L         + A  +    D    + + A   H+  L
Sbjct: 824 SLQTK----LRLIKREPFVAPAGLTPNEIDSTWSALEKAEQEHAEAL 866

>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* Length = 995

 Score = 46.2 bits (110), Expect = 2e-05
 Identities = 9/111 (8%), Positives = 24/111 (21%), Gaps = 8/111 (7%)

Query: 132 HEKWAAVKIQSVFRGYLARRALRAL---KGLVKLQAHVRGYLVRKQTTATLHGMQALIRA 188
               +   +QS    +   +        + + +L+A       + +       +      
Sbjct: 785 DFGDSIESVQSFMNAHKEYKKTEKPPKGQEVSELEAIYNSLQTKLRLIKREPFVAPAGLT 844

Query: 189 QVTARSQRARACGGLTNNNSNRLESRARKSMERYDDETRSEQAAVSIHSRR 239
                S  +                  R  ++R        Q    I  + 
Sbjct: 845 PNEIDSTWSALEKAE-----QEHAEALRIELKRQKKIAVLLQKYNRILKKL 890

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184

 Score = 47.5 bits (113), Expect = 7e-06
 Identities = 15/111 (13%), Positives = 37/111 (33%), Gaps = 5/111 (4%)

Query: 136 AAVKIQSVFRGYLARRALRALK----GLVKLQAHVRGYLVRKQTTATLHGMQALIRAQVT 191
             +  Q+  RGYLAR+A    +     +  +Q +VR ++        +     +      
Sbjct: 794 VIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMNVXH-WPWMXLFFXIXPLLKV 852

Query: 192 ARSQRARACGGLTNNNSNRLESRARKSMERYDDETRSEQAAVSIHSRRLSA 242
            R +            +   + +A   ++  + +        ++   +L A
Sbjct: 853 TRQEEEMQAKDEELQRTKERQQKAEAELKELEQKHTQLCEEKNLLQEKLQA 903

>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1 Length = 1010

 Score = 41.6 bits (98), Expect = 5e-04
 Identities = 13/122 (10%), Positives = 34/122 (27%), Gaps = 18/122 (14%)

Query: 136 AAVKIQSVFRGYLARRALRALK----------GLVKLQAHVRGYLVRKQTTATLHG---- 181
              K   + R     + +   +           +  +Q+ +  +   K+T     G    
Sbjct: 765 EQTKSDYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTEKPPKGQEVS 824

Query: 182 -MQALIRAQVTARSQRARACGGLTNNNSNRLESRARKSMERYDDETRSEQAAVSIHSRRL 240
            ++A+  +  T      R         +         ++E+     +    A+ I  +R 
Sbjct: 825 ELEAIYNSLQTKLRLIKREPFVAPAGLTPNEIDSTWSALEK---AEQEHAEALRIELKRQ 881

Query: 241 SA 242
             
Sbjct: 882 KK 883

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	447
2ix7_C	58	Myosin-5A; contractIle protein/metal binding, acti	99.2
1n2d_C	48	IQ2 and IQ3 motifs from MYO2P, A class V myosin; p	98.99
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	98.8
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	98.77
1n2d_C	48	IQ2 and IQ3 motifs from MYO2P, A class V myosin; p	98.38
2ix7_C	58	Myosin-5A; contractIle protein/metal binding, acti	98.05
1wdc_A	64	Scallop myosin; calcium binding protein, muscle pr	97.64
2bl0_A	63	Major plasmodial myosin heavy chain; muscle protei	97.61
1wdc_A	64	Scallop myosin; calcium binding protein, muscle pr	97.57
2bl0_A	63	Major plasmodial myosin heavy chain; muscle protei	97.5
2l53_B	31	CAM, voltage-gated sodium channel type V alpha iso	97.31
2kxw_B	27	Sodium channel protein type 2 subunit alpha; actio	97.27
1kk8_A	837	Myosin heavy chain, striated muscle; actin-detache	97.21
1kk8_A	837	Myosin heavy chain, striated muscle; actin-detache	96.67
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	96.42
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	95.85
3gn4_A	148	Myosin-VI; unconventional myosin, motility, lever	95.16
4anj_A	1052	Unconventional myosin-VI, green fluorescent prote;	90.14
4dck_A	168	Sodium channel protein type 5 subunit alpha; IQ-mo	87.6
1w7j_A	795	Myosin VA; motor protein, unconventional myosin, m	87.28
3gn4_A	148	Myosin-VI; unconventional myosin, motility, lever	85.96

>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus}

Probab=99.20  E-value=2.6e-11  Score=92.27  Aligned_cols=49  Identities=27%  Similarity=0.430  Sum_probs=44.9

Q ss_pred             hHHHHHHHHHHhhhhHHHHHHHHHH-HHHHHHHHHHhhHHHHHHHHHHHH
Q 013213          132 HEKWAAVKIQSVFRGYLARRALRAL-KGLVKLQAHVRGYLVRKQTTATLH  180 (447)
Q Consensus       132 ree~AAIkIQsafRGylaRKa~ral-r~iVkLQAlvRG~lvRRq~~~~l~  180 (447)
                      +.+.|||.||+.||||++|+.|+.+ .++|.||+.|||+++|+.|..+..
T Consensus         3 ~~~~aai~IQ~~~Rg~~~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~~~~r~   52 (58)
T 2ix7_C            3 KLRAACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYAKFLRR   52 (58)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5678999999999999999999999 699999999999999999976554

>1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae}

Probab=98.99  E-value=7e-10  Score=81.20  Aligned_cols=42  Identities=26%  Similarity=0.332  Sum_probs=38.6

Q ss_pred             HHHHHHHHHhhhhHHHHHHHHHH-H--HHHHHHHHHhhHHHHHHH
Q 013213          134 KWAAVKIQSVFRGYLARRALRAL-K--GLVKLQAHVRGYLVRKQT  175 (447)
Q Consensus       134 e~AAIkIQsafRGylaRKa~ral-r--~iVkLQAlvRG~lvRRq~  175 (447)
                      ..+||.||+.||||++|+.|..+ +  ++|+||++|||+++|+.|
T Consensus         3 r~a~i~iQ~~~Rg~l~R~~~~~~~~~~aai~IQ~~~Rg~~~Rk~y   47 (48)
T 1n2d_C            3 SQAIKYLQNNIKGFIIRQRVNDEMKVNCATLLQAAYRGHSIRANV   47 (48)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhh
Confidence            36899999999999999999988 3  899999999999999986

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}

Probab=98.80  E-value=1.1e-08  Score=116.23  Aligned_cols=65  Identities=29%  Similarity=0.364  Sum_probs=56.0

Q ss_pred             HHHHHHHHHhhhhHHHHHHHHHH-HHHHHHHHHHhhHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHh
Q 013213          134 KWAAVKIQSVFRGYLARRALRAL-KGLVKLQAHVRGYLVRKQTTATLHGMQALIRAQVTARSQRARA  199 (447)
Q Consensus       134 e~AAIkIQsafRGylaRKa~ral-r~iVkLQAlvRG~lvRRq~~~~l~~~qA~vkIQa~iR~~raRr  199 (447)
                      ..+|++||++||||++|+.|+.+ .+++.||+.+||+++|+++.. ++...|+++||+.||++++|+
T Consensus       768 ~~aa~~IQa~~Rg~l~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~~~-lr~~~AAi~IQs~~Rg~~~Rk  833 (1080)
T 2dfs_A          768 RAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARCYATF-LRRTRAAIIIQKFQRMYVVRK  833 (1080)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhcccc-cccchhHHHHHHHHhhHHHHH
Confidence            57999999999999999999999 689999999999999998854 455678888888888888876

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}

Probab=98.77  E-value=9.5e-09  Score=116.70  Aligned_cols=84  Identities=29%  Similarity=0.343  Sum_probs=61.3

Q ss_pred             hhhcccCCCCCCcC---cchhHHHHHHHHHHhhhhHHHHHHHHHH-HHHHHHHHHHhhHHHHHHHHHHHHhHhHHHHHHH
Q 013213          115 VVRLTSHGRGTMFG---GATHEKWAAVKIQSVFRGYLARRALRAL-KGLVKLQAHVRGYLVRKQTTATLHGMQALIRAQV  190 (447)
Q Consensus       115 vvrlt~~~r~~~~~---~~~ree~AAIkIQsafRGylaRKa~ral-r~iVkLQAlvRG~lvRRq~~~~l~~~qA~vkIQa  190 (447)
                      ++.+|+..||++..   ...++..||++||++||||++|+.|..+ .++|.||+.|||+++|++|..++. ..+++.||+
T Consensus       794 ai~IQ~~~Rg~~aR~~~~~lr~~~AAi~IQs~~Rg~~~Rk~y~~lr~aai~IQs~~Rg~laRr~~~~lr~-~~aav~IQ~  872 (1080)
T 2dfs_A          794 AITIQRYVRGHQARCYATFLRRTRAAIIIQKFQRMYVVRKRYQCMRDATIALQALLRGYLVRNKYQMMLR-EHKSIIIQK  872 (1080)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcccccccchhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence            44555555554321   1245678999999999999999999998 688999999999999998865443 346666777


Q ss_pred             HHHHHHHHh
Q 013213          191 TARSQRARA  199 (447)
Q Consensus       191 ~iR~~raRr  199 (447)
                      .||++.+|+
T Consensus       873 ~~Rg~l~R~  881 (1080)
T 2dfs_A          873 HVRGWLARV  881 (1080)
T ss_dssp             HHTTTHHHH
T ss_pred             HHHHHHHHH
Confidence            777777665

>1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae}

Probab=98.38  E-value=7.6e-07  Score=64.95  Aligned_cols=42  Identities=19%  Similarity=0.387  Sum_probs=37.0

Q ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHh
Q 013213          157 KGLVKLQAHVRGYLVRKQTTATLHGMQALIRAQVTARSQRARA  199 (447)
Q Consensus       157 r~iVkLQAlvRG~lvRRq~~~~l~~~qA~vkIQa~iR~~raRr  199 (447)
                      .++|.||+.+||+++|+++..+ +...++++||+.|||+.+|+
T Consensus         4 ~a~i~iQ~~~Rg~l~R~~~~~~-~~~~aai~IQ~~~Rg~~~Rk   45 (48)
T 1n2d_C            4 QAIKYLQNNIKGFIIRQRVNDE-MKVNCATLLQAAYRGHSIRA   45 (48)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhHHHHH
Confidence            5789999999999999999654 44569999999999999986

>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus}

Probab=98.05  E-value=8.7e-06  Score=61.59  Aligned_cols=40  Identities=30%  Similarity=0.468  Sum_probs=36.4

Q ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHh
Q 013213          157 KGLVKLQAHVRGYLVRKQTTATLHGMQALIRAQVTARSQRARA  199 (447)
Q Consensus       157 r~iVkLQAlvRG~lvRRq~~~~l~~~qA~vkIQa~iR~~raRr  199 (447)
                      .++|.||+.|||+++|+.|..+.   .+++.||+.|||+.+|+
T Consensus         6 ~aai~IQ~~~Rg~~~Rk~~~~~r---~aai~IQ~~~Rg~~aR~   45 (58)
T 2ix7_C            6 AACIRIQKTIRGWLLRKRYLCMQ---RAAITVQRYVRGYQARC   45 (58)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHH
Confidence            58999999999999999996655   59999999999999997

>1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A

Probab=97.64  E-value=0.00014  Score=56.17  Aligned_cols=41  Identities=29%  Similarity=0.316  Sum_probs=20.5

Q ss_pred             HHHHHHHHhhHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHh
Q 013213          159 LVKLQAHVRGYLVRKQTTATLHGMQALIRAQVTARSQRARA  199 (447)
Q Consensus       159 iVkLQAlvRG~lvRRq~~~~l~~~qA~vkIQa~iR~~raRr  199 (447)
                      ++.||+.+||+++|+.|..++...+|+..||..+|++..++
T Consensus         9 ~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~l~   49 (64)
T 1wdc_A            9 ISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLR   49 (64)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            44445555555555555444444445545555555554443

>2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=97.61  E-value=9.8e-05  Score=56.97  Aligned_cols=42  Identities=19%  Similarity=0.072  Sum_probs=26.8

Q ss_pred             HHHHHHHHHhhHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHh
Q 013213          158 GLVKLQAHVRGYLVRKQTTATLHGMQALIRAQVTARSQRARA  199 (447)
Q Consensus       158 ~iVkLQAlvRG~lvRRq~~~~l~~~qA~vkIQa~iR~~raRr  199 (447)
                      .++.||+.+||+++|+.|..++...+|+..||..+|++..++
T Consensus         6 i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~lr   47 (63)
T 2bl0_A            6 IVKVVQAAARGWVERKHFRQAREKSVSARIIQDNIRAYLEFK   47 (63)
T ss_dssp             HTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            355666666666666666666666666666666666666654

>1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A

Probab=97.57  E-value=0.00015  Score=56.08  Aligned_cols=44  Identities=32%  Similarity=0.459  Sum_probs=39.1

Q ss_pred             hHHHHHHHHHHhhhhHHHHHHHHHH----HHHHHHHHHHhhHHHHHHH
Q 013213          132 HEKWAAVKIQSVFRGYLARRALRAL----KGLVKLQAHVRGYLVRKQT  175 (447)
Q Consensus       132 ree~AAIkIQsafRGylaRKa~ral----r~iVkLQAlvRG~lvRRq~  175 (447)
                      +-...++.||+..|||++|+.|..+    .++..||..+|+++.++..
T Consensus         4 ~l~~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~l~~w   51 (64)
T 1wdc_A            4 RLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNW   51 (64)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence            4457899999999999999999999    3788999999999999865

>2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=97.50  E-value=0.00013  Score=56.23  Aligned_cols=42  Identities=24%  Similarity=0.315  Sum_probs=37.6

Q ss_pred             HHHHHHHHHhhhhHHHHHHHHHH----HHHHHHHHHHhhHHHHHHH
Q 013213          134 KWAAVKIQSVFRGYLARRALRAL----KGLVKLQAHVRGYLVRKQT  175 (447)
Q Consensus       134 e~AAIkIQsafRGylaRKa~ral----r~iVkLQAlvRG~lvRRq~  175 (447)
                      ...++.||+..|||++|+.|..+    .++..||..+|+++.++..
T Consensus         4 ~~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~lr~w   49 (63)
T 2bl0_A            4 GEIVKVVQAAARGWVERKHFRQAREKSVSARIIQDNIRAYLEFKNW   49 (63)
T ss_dssp             HHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence            46789999999999999999999    3788999999999998854

>2l53_B CAM, voltage-gated sodium channel type V alpha isoform variant; calmodulin, IQ motif, complex, Ca-binding protein; NMR {Homo sapiens}

Probab=97.31  E-value=0.00014  Score=49.85  Aligned_cols=24  Identities=38%  Similarity=0.504  Sum_probs=21.2

Q ss_pred             hhHHHHHHHHHHhhhhHHHHHHHH
Q 013213          131 THEKWAAVKIQSVFRGYLARRALR  154 (447)
Q Consensus       131 ~ree~AAIkIQsafRGylaRKa~r  154 (447)
                      .+|+.+|+.||.+||+||.|+.+.
T Consensus         3 k~Ee~aA~vIQrA~R~yl~rr~~~   26 (31)
T 2l53_B            3 GSEEVSAMVIQRAFRRHLLQRSLK   26 (31)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhc
Confidence            578999999999999999997643

>2kxw_B Sodium channel protein type 2 subunit alpha; action potential, amino acid motifs, animals, autism, biomol brain chemistry; NMR {Rattus norvegicus}

Probab=97.27  E-value=0.00012  Score=48.77  Aligned_cols=22  Identities=32%  Similarity=0.579  Sum_probs=19.6

Q ss_pred             hhHHHHHHHHHHhhhhHHHHHH
Q 013213          131 THEKWAAVKIQSVFRGYLARRA  152 (447)
Q Consensus       131 ~ree~AAIkIQsafRGylaRKa  152 (447)
                      .+|+.||+.||.+||+||.++.
T Consensus         3 k~Ee~aA~vIQrA~R~yl~~~~   24 (27)
T 2kxw_B            3 KQEEVSAIVIQRAYRRYLLKQK   24 (27)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhh
Confidence            4689999999999999999864

>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...

Probab=97.21  E-value=0.00039  Score=77.48  Aligned_cols=44  Identities=32%  Similarity=0.454  Sum_probs=37.1

Q ss_pred             HHHHHHHHHHhhhhHHHHHHHHHH----HHHHHHHHHHhhHHHHHHHH
Q 013213          133 EKWAAVKIQSVFRGYLARRALRAL----KGLVKLQAHVRGYLVRKQTT  176 (447)
Q Consensus       133 ee~AAIkIQsafRGylaRKa~ral----r~iVkLQAlvRG~lvRRq~~  176 (447)
                      ....|+.||++||||++|+.|+.+    .+++.||..||||++||.+.
T Consensus       778 l~~~~~~iQa~~Rg~l~R~~~~k~~~~r~a~~~IQ~~~R~~~~~r~~~  825 (837)
T 1kk8_A          778 LSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNWQ  825 (837)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCH
T ss_pred             HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchH
Confidence            345788999999999999999887    47889999999999998763

>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...

Probab=96.67  E-value=0.0034  Score=70.00  Aligned_cols=43  Identities=30%  Similarity=0.291  Sum_probs=40.0

Q ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHh
Q 013213          157 KGLVKLQAHVRGYLVRKQTTATLHGMQALIRAQVTARSQRARA  199 (447)
Q Consensus       157 r~iVkLQAlvRG~lvRRq~~~~l~~~qA~vkIQa~iR~~raRr  199 (447)
                      +.++.||+.|||+++|++|..++....|++.||+.||++.+++
T Consensus       780 ~~~~~iQa~~Rg~l~R~~~~k~~~~r~a~~~IQ~~~R~~~~~r  822 (837)
T 1kk8_A          780 KIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLR  822 (837)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            5788999999999999999988877889999999999999987

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A

Probab=96.42  E-value=0.0029  Score=72.46  Aligned_cols=42  Identities=26%  Similarity=0.389  Sum_probs=37.8

Q ss_pred             HHHHHHHHHhhhhHHHHHHHHHH----HHHHHHHHHHhhHHHHHHH
Q 013213          134 KWAAVKIQSVFRGYLARRALRAL----KGLVKLQAHVRGYLVRKQT  175 (447)
Q Consensus       134 e~AAIkIQsafRGylaRKa~ral----r~iVkLQAlvRG~lvRRq~  175 (447)
                      ..+|+.||+.||||++|+.|..+    .+++.||+.||||+.+|.+
T Consensus       792 ~~~~~~iQ~~~Rg~l~R~~~~k~~~~~~a~~~iQ~~~r~~~~~k~~  837 (1184)
T 1i84_S          792 TDVIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMNVXHW  837 (1184)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            36899999999999999999988    4899999999999999754

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A

Probab=95.85  E-value=0.015  Score=66.74  Aligned_cols=52  Identities=23%  Similarity=0.303  Sum_probs=43.7

Q ss_pred             HHHHHHHHH-HHHHHHHHHHhhHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHh
Q 013213          148 LARRALRAL-KGLVKLQAHVRGYLVRKQTTATLHGMQALIRAQVTARSQRARA  199 (447)
Q Consensus       148 laRKa~ral-r~iVkLQAlvRG~lvRRq~~~~l~~~qA~vkIQa~iR~~raRr  199 (447)
                      |....-..+ ..++.||+.|||+++|++|..++....+++.||+.||++..++
T Consensus       783 LE~~r~~~l~~~~~~iQ~~~Rg~l~R~~~~k~~~~~~a~~~iQ~~~r~~~~~k  835 (1184)
T 1i84_S          783 LEEERDLKITDVIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMNVX  835 (1184)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            443333444 5788999999999999999988888899999999999999987

>3gn4_A Myosin-VI; unconventional myosin, motility, lever ARM, 3-helix bundle, actin-binding, ATP-binding, calmodulin-binding, coiled coil; 2.70A {Sus scrofa}

Probab=95.16  E-value=0.022  Score=51.60  Aligned_cols=48  Identities=25%  Similarity=0.382  Sum_probs=35.1

Q ss_pred             hhHhhhhcccCCCCCCcCcchhHHHHHHHHHHhhhhHHHHHHHHHH-HHHHHHHHHH
Q 013213          111 AAVAVVRLTSHGRGTMFGGATHEKWAAVKIQSVFRGYLARRALRAL-KGLVKLQAHV  166 (447)
Q Consensus       111 aa~~vvrlt~~~r~~~~~~~~ree~AAIkIQsafRGylaRKa~ral-r~iVkLQAlv  166 (447)
                      ++--||+|....        .=+..++|+||+.+||||+|+.++-. .|++++.+|.
T Consensus        30 ~~lsvIKLknKI--------~yR~~~~i~iQktvR~~L~rkkhkPRi~g~~kv~~L~   78 (148)
T 3gn4_A           30 CSLSVIKLKNKI--------KYRAEACIKMQKTIRMWLCKRRHKPRIDGLVKVGTLK   78 (148)
T ss_dssp             HHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            345566666321        23567889999999999999988876 7888877765

>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}

Probab=90.14  E-value=0.45  Score=54.42  Aligned_cols=43  Identities=7%  Similarity=-0.000  Sum_probs=34.4

Q ss_pred             HHHHHHHHHHhhhhHHHHHHHHHH-HHHHHHHHHHhhHHHHHHHH
Q 013213          133 EKWAAVKIQSVFRGYLARRALRAL-KGLVKLQAHVRGYLVRKQTT  176 (447)
Q Consensus       133 ee~AAIkIQsafRGylaRKa~ral-r~iVkLQAlvRG~lvRRq~~  176 (447)
                      ...+|+.||. +|||++|+.|+.+ .++|.||.+.|+...|+...
T Consensus       774 ~~~~~~~iq~-~r~~l~r~~~~k~~~~a~~i~~~~r~~~~r~~~~  817 (1052)
T 4anj_A          774 PDHLAELVKR-VNHWLICSRWKKVQWCSLSVIKLKNKIKYRAEAV  817 (1052)
T ss_dssp             HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence            3467777775 7999999999999 58889999999887776543

>4dck_A Sodium channel protein type 5 subunit alpha; IQ-motif, EF-hand, voltage-gated sodium channel regulation, CTD binds to FGF13 and CAM. CAM binds to Ca2+.; 2.20A {Homo sapiens} PDB: 2kbi_A

Probab=87.60  E-value=0.38  Score=44.27  Aligned_cols=26  Identities=38%  Similarity=0.534  Sum_probs=22.4

Q ss_pred             hhHHHHHHHHHHhhhhHHHHHHHHHH
Q 013213          131 THEKWAAVKIQSVFRGYLARRALRAL  156 (447)
Q Consensus       131 ~ree~AAIkIQsafRGylaRKa~ral  156 (447)
                      ..++.||+.||.+||.|+.|+.+..-
T Consensus       127 ~~e~~aA~~IQra~R~~~~r~~~~~~  152 (168)
T 4dck_A          127 KHEEVSAMVIQRAFRRHLLQRSLKHA  152 (168)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccccc
Confidence            56889999999999999998877653

>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A

Probab=87.28  E-value=0.32  Score=54.02  Aligned_cols=23  Identities=30%  Similarity=0.606  Sum_probs=16.1

Q ss_pred             HHHHHHHHhhhhHHHHHHHHHHH
Q 013213          135 WAAVKIQSVFRGYLARRALRALK  157 (447)
Q Consensus       135 ~AAIkIQsafRGylaRKa~ralr  157 (447)
                      .+|+.||++||||++|+.|+.++
T Consensus       769 ~~~~~iQ~~~Rg~l~R~~~~~~r  791 (795)
T 1w7j_A          769 AACIRIQKTIRGWLMRKKYMRMR  791 (795)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Confidence            46777777777777777777664

>3gn4_A Myosin-VI; unconventional myosin, motility, lever ARM, 3-helix bundle, actin-binding, ATP-binding, calmodulin-binding, coiled coil; 2.70A {Sus scrofa}

Probab=85.96  E-value=1.4  Score=39.78  Aligned_cols=30  Identities=17%  Similarity=0.466  Sum_probs=22.4

Q ss_pred             HHHHHHHHHhhHHHHHHHHHHHHhHhHHHHHHH
Q 013213          158 GLVKLQAHVRGYLVRKQTTATLHGMQALIRAQV  190 (447)
Q Consensus       158 ~iVkLQAlvRG~lvRRq~~~~l~~~qA~vkIQa  190 (447)
                      .+|+||+.||||++|+++.-.+.   ++.++-+
T Consensus        47 ~~i~iQktvR~~L~rkkhkPRi~---g~~kv~~   76 (148)
T 3gn4_A           47 ACIKMQKTIRMWLCKRRHKPRID---GLVKVGT   76 (148)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH---HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhhHHH---HHHHHHH
Confidence            78889999999999999865543   4444433

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	447
d1kk8a2	789	c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain	4e-07
d2mysa2	794	c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain	6e-07

>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 789

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

 Score = 50.1 bits (119), Expect = 4e-07
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 4/42 (9%)

Query: 136 AAVKIQSVFRGYLARRALRALK----GLVKLQAHVRGYLVRK 173
                Q+  RGYL R+A + L+    GL  +Q ++R +LV +
Sbjct: 733 IISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLR 774

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 794

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

 Score = 49.7 bits (118), Expect = 6e-07
 Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 4/42 (9%)

Query: 136 AAVKIQSVFRGYLARRALRAL----KGLVKLQAHVRGYLVRK 173
                Q+  RG+L R   RA+    + +  +Q +VR ++  K
Sbjct: 737 IITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVK 778

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	447
d2mysa2	794	Myosin S1, motor domain {Chicken (Gallus gallus),	97.66
d1kk8a2	789	Myosin S1, motor domain {Bay scallop (Aequipecten	97.57
d2mysa2	794	Myosin S1, motor domain {Chicken (Gallus gallus),	97.08
d1kk8a2	789	Myosin S1, motor domain {Bay scallop (Aequipecten	96.66
d1w7ja2	730	Myosin S1, motor domain {Chicken (Gallus gallus),	90.91
d1w7ja2	730	Myosin S1, motor domain {Chicken (Gallus gallus),	81.3

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

Probab=97.66  E-value=1.9e-05  Score=84.62  Aligned_cols=43  Identities=26%  Similarity=0.353  Sum_probs=38.5

Q ss_pred             HHHHHHHHHhhhhHHHHHHHHHH----HHHHHHHHHHhhHHHHHHHH
Q 013213          134 KWAAVKIQSVFRGYLARRALRAL----KGLVKLQAHVRGYLVRKQTT  176 (447)
Q Consensus       134 e~AAIkIQsafRGylaRKa~ral----r~iVkLQAlvRG~lvRRq~~  176 (447)
                      ..+|+.||+.||||++|+.|+.+    .+++.||+.+||+++||.+.
T Consensus       735 ~~~~~~IQ~~~Rg~l~Rk~~~~~~~~r~a~~~IQ~~~R~~~~~r~~~  781 (794)
T d2mysa2         735 AEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVKHWP  781 (794)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH
Confidence            46899999999999999999887    38999999999999999873

>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=97.57  E-value=2.7e-05  Score=83.38  Aligned_cols=44  Identities=32%  Similarity=0.481  Sum_probs=39.7

Q ss_pred             HHHHHHHHHHhhhhHHHHHHHHHHH----HHHHHHHHHhhHHHHHHHH
Q 013213          133 EKWAAVKIQSVFRGYLARRALRALK----GLVKLQAHVRGYLVRKQTT  176 (447)
Q Consensus       133 ee~AAIkIQsafRGylaRKa~ralr----~iVkLQAlvRG~lvRRq~~  176 (447)
                      ...+|+.||++||||++||.|+.++    +++.||+.+||+++||.|.
T Consensus       730 l~~~~~~IQ~~~R~~~~Rk~y~k~r~~~~ai~~iQ~~~R~~~~rr~~~  777 (789)
T d1kk8a2         730 LSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNWQ  777 (789)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccH
Confidence            3568999999999999999999984    7889999999999999874

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

Probab=97.08  E-value=0.00046  Score=73.68  Aligned_cols=53  Identities=23%  Similarity=0.231  Sum_probs=44.1

Q ss_pred             HHHHHHHHHH-HHHHHHHHHHhhHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHh
Q 013213          147 YLARRALRAL-KGLVKLQAHVRGYLVRKQTTATLHGMQALIRAQVTARSQRARA  199 (447)
Q Consensus       147 ylaRKa~ral-r~iVkLQAlvRG~lvRRq~~~~l~~~qA~vkIQa~iR~~raRr  199 (447)
                      +|....-..+ +.++.||+.||||++|++|..++....+++.||+.||+++.|+
T Consensus       725 ~LE~~r~~~l~~~~~~IQ~~~Rg~l~Rk~~~~~~~~r~a~~~IQ~~~R~~~~~r  778 (794)
T d2mysa2         725 LLEEMRDDKLAEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVK  778 (794)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            3444333444 6788999999999999999988887889999999999999987

>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=96.66  E-value=0.0016  Score=69.29  Aligned_cols=43  Identities=30%  Similarity=0.291  Sum_probs=38.9

Q ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHh
Q 013213          157 KGLVKLQAHVRGYLVRKQTTATLHGMQALIRAQVTARSQRARA  199 (447)
Q Consensus       157 r~iVkLQAlvRG~lvRRq~~~~l~~~qA~vkIQa~iR~~raRr  199 (447)
                      +.++.||+.||||++||+|..++....+++.||+.+|++.+|+
T Consensus       732 ~~~~~IQ~~~R~~~~Rk~y~k~r~~~~ai~~iQ~~~R~~~~rr  774 (789)
T d1kk8a2         732 KIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLR  774 (789)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            5788999999999999999877766678999999999999997

>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), Va isoform [TaxId: 9031]

Probab=90.91  E-value=0.065  Score=56.00  Aligned_cols=22  Identities=32%  Similarity=0.593  Sum_probs=12.6

Q ss_pred             HHHHHHHHhhhhHHHHHHHHHH
Q 013213          135 WAAVKIQSVFRGYLARRALRAL  156 (447)
Q Consensus       135 ~AAIkIQsafRGylaRKa~ral  156 (447)
                      .+||+||+.||||++||.|+.+
T Consensus       707 ~~~~~iQ~~~R~~l~Rk~~~r~  728 (730)
T d1w7ja2         707 AACIRIQKTIRGWLMRKKYMRM  728 (730)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHh
Confidence            3555666666666666655544

>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), Va isoform [TaxId: 9031]

Probab=81.30  E-value=0.65  Score=48.18  Aligned_cols=31  Identities=26%  Similarity=0.483  Sum_probs=23.5

Q ss_pred             HHHHHHHHH-HHHHHHHHHHhhHHHHHHHHHH
Q 013213          148 LARRALRAL-KGLVKLQAHVRGYLVRKQTTAT  178 (447)
Q Consensus       148 laRKa~ral-r~iVkLQAlvRG~lvRRq~~~~  178 (447)
                      |.+..-..+ +.+|+||+.||||++||+|..+
T Consensus       697 LE~~r~~~l~~~~~~iQ~~~R~~l~Rk~~~r~  728 (730)
T d1w7ja2         697 LEKIRADKLRAACIRIQKTIRGWLMRKKYMRM  728 (730)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            444444444 5799999999999999999543