Citrus Sinensis ID: 013257

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------
MRRRGVCKQWGINRFQREKIGNWKLARDTFFTRNHSTIIAFAVGKKYVAGNGFHVVGAHTDSPCLKLKPVSKVTKGGYLEVGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHLDRNVNSDGFKVNTQSHLVPILATSLKEELNKVVTDSPNERTDTYSSKHHSHLLQMIASQIGCRPDDICDFELQACDTQPSIVAGIKKEFIFSGRLDNLCMSFCSLKALIDSTSSEGDLEDEIGVRMVALFDHEEVGSDSAQGAGSPAMLDALSRITNSFCSNSKLIEKAIQRSFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFFQEFSELDAKIKVDM
ccHHHHHHHcccccccccccccccccccEEEEEcccEEEEEEEcccccccccEEEEEEcccccccccccccccccccEEEEccEEcccccccccccccccccEEEEEEcccccccccEEEEccccccEEEccccccccccccccccccccccccccccEEccHHHHHHccccccccccccccccccHHHHHHHHHHHHccccccccccEEEEEEcccccEEcccccccccccccHHHHHHHHHHHHHHcccccccccccccEEEEEEEcccccccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHcccHHccccccccccccccccccccccccccEEEEEcccccccccHHHHHHHHHHHHHccccEEEEEEcccccccccHHHHHHccccccEEEccHHHHHHcHHHHHcccHHHHHHHHHHHHHHHHcHHccccccccc
cHHHHHHHHcccEEEcccccccEccccEEEEEEcccEEEEEEEcccccccccEEEEEEcccccccEEEEccccccccEEEEEEEEcccccEcccccccccEcEEEEEEccccccccEEEEEEEccccEEEcccEEEEEcccccccccccccHHccHHHHHHHHHHHHcccccccccccccccHHccHHHHHHHHHHHccccHHHHEcEEEEEEcccccEEccccccEEccccHHHHHHHHHHHHHHHHHccccHHccccccEEEEEEEccccccccccccccccHHHHHHHHHHHHccccHHHHHHHHHHcEEEEcHHHHccccccHHHcccccccccccccEEEEEccccccccHHHHHHHHHHHHHccccEEEEEEEccccccccHHHHHHHHcccEEEEcccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccHccccEEEcc
mrrrgvckqwginrfqrekignwklardtfftrnHSTIIAFAVGkkyvagngfhvvgahtdspclklkpvskvtkggylevgvqtyggglwhtwfdrDLTVAGRVIIregkdgsgpyshklvridepimriptlaihldrnvnsdgfkvntqshLVPILATSLKEELNKvvtdspnertdtysskhHSHLLQMIASQigcrpddicdfelqacdtqpsivaGIKKEFIFSGRLDNLCMSFCSLKALIdstssegdledEIGVRMVALFdheevgsdsaqgagspAMLDALSRITNSFCSNSKLIEKAIQRSFLVSADmahalhpnymdkhednhqpklhgglvikhnanqryatNAVTSFVFREVaskhnlpvqdfvvrndmacgstigpilasgvgirtvdvgapqlsmhsIREMCAVDDVKHSYEHFKAFFQEFSELDAKIKVDM
mrrrgvckqwginrfqrekignwklardtfftrNHSTIIAFAVGKKYVAGNGFHVvgahtdspclklKPVSKVTKGGYLEVGVQTYGGGLWHTWFDRDLTVAGRVIiregkdgsgpyshklvridepIMRIPTLAIHLDRNVNSDGFKVNTQSHLVPILATSLKEELNKVVTDSPNERTDTYSSKHHSHLLQMIASQIGCRPDDICDFELQACDTQPSIVAGIKKEFIFSGRLDNLCMSFCSLKALIDSTSSEGDLEDEIGVRMVALFDHEEVGSDSAQGAGSPAMLDALSRITNSFCSNSKLIEKAIQRSFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFFQEFSELDAKIKVDM
MRRRGVCKQWGINRFQREKIGNWKLARDTFFTRNHSTIIAFAVGKKYVAGNGFHVVGAHTDSPCLKLKPVSKVTKGGYLEVGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHLDRNVNSDGFKVNTQSHLVPILATSLKEELNKVVTDSPNERTDTYSSKHHSHLLQMIASQIGCRPDDICDFELQACDTQPSIVAGIKKEFIFSGRLDNLCMSFCSLKALIDSTSSEGDLEDEIGVRMVALFDHEEVGSDSAQGAGSPAMLDALSRITNSFCSNSKLIEKAIQRSFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFFQEFSELDAKIKVDM
*****VCKQWGINRFQREKIGNWKLARDTFFTRNHSTIIAFAVGKKYVAGNGFHVVGAHTDSPCLKLKPVSKVTKGGYLEVGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHLDRNVNSDGFKVNTQSHLVPILATSLK************************HLLQMIASQIGCRPDDICDFELQACDTQPSIVAGIKKEFIFSGRLDNLCMSFCSLKALIDS******LEDEIGVRMVALFD*******************ALSRITNSFCSNSKLIEKAIQRSFLVSADMAHALHPNY***********LHGGLVIKHNANQRYATNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFFQEFSEL********
*RRRGVCKQWGINRFQREKIGNWKLARDTFFTRNHSTIIAFAVGKKYVAGNGFHVVGAHTDSPCLKLKPVSKVTKGGYLEVGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHLDRNVNSDGFKVNTQSHLVPILATSLKEE******************KHHSHLLQMIASQIGCRPDDICDFELQACDTQPSIVAGIKKEFIFSGRLDNLCMSFCSLKALIDSTSSEGDLEDEIGVRMVALFDHEEVGSDSAQGAGSPAMLDALSRITNSFCSNSKLIEKAIQRSFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFFQEFSELDAKIKVDM
MRRRGVCKQWGINRFQREKIGNWKLARDTFFTRNHSTIIAFAVGKKYVAGNGFHVVGAHTDSPCLKLKPVSKVTKGGYLEVGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHLDRNVNSDGFKVNTQSHLVPILATSLKEELNKVVTDSPNERTDTYSSKHHSHLLQMIASQIGCRPDDICDFELQACDTQPSIVAGIKKEFIFSGRLDNLCMSFCSLKALIDSTSSEGDLEDEIGVRMVALFDHEE**********SPAMLDALSRITNSFCSNSKLIEKAIQRSFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFFQEFSELDAKIKVDM
*RRRGVCKQWGINRFQREKIGNWKLARDTFFTRNHSTIIAFAVGKKYVAGNGFHVVGAHTDSPCLKLKPVSKVTKGGYLEVGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHLDRNVNSDGFKVNTQSHLVPILATSLKEELNK**************SKHHSHLLQMIASQIGCRPDDICDFELQACDTQPSIVAGIKKEFIFSGRLDNLCMSFCSLKALIDSTSSEGDLEDEIGVRMVALFDHEEVGSD****AGSPAMLDALSRITNSFCSNSKLIEKAIQRSFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFFQEFSELDAKIKVDM
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MRRRGVCKQWGINRFQREKIGNWKLARDTFFTRNHSTIIAFAVGKKYVAGNGFHVVGAHTDSPCLKLKPVSKVTKGGYLEVGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHLDRNVNSDGFKVNTQSHLVPILATSLKEELNKVVTDSPNERTDTYSSKHHSHLLQMIASQIGCRPDDICDFELQACDTQPSIVAGIKKEFIFSGRLDNLCMSFCSLKALIDSTSSEGDLEDEIGVRMVALFDHEEVGSDSAQGAGSPAMLDALSRITNSFCSNSKLIEKAIQRSFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFFQEFSELDAKIKVDM
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query447 2.2.26 [Sep-21-2011]
B9RAJ0491 Probable aspartyl aminope N/A no 0.953 0.867 0.795 0.0
Q9ULA0475 Aspartyl aminopeptidase O yes no 0.966 0.909 0.522 1e-127
Q5RBT2471 Aspartyl aminopeptidase O yes no 0.966 0.917 0.520 1e-127
Q54M70484 Aspartyl aminopeptidase O yes no 0.975 0.900 0.496 1e-126
Q2HJH1471 Aspartyl aminopeptidase O yes no 0.964 0.915 0.517 1e-125
Q9Z2W0473 Aspartyl aminopeptidase O yes no 0.917 0.866 0.533 1e-122
Q2UPZ7498 Aspartyl aminopeptidase O yes no 0.917 0.823 0.493 1e-116
O36014467 Aspartyl aminopeptidase 1 yes no 0.901 0.862 0.482 1e-107
P38821490 Aspartyl aminopeptidase 4 yes no 0.914 0.834 0.458 1e-101
Q19087470 Putative aspartyl aminope yes no 0.917 0.872 0.434 2e-95
>sp|B9RAJ0|DNPEP_RICCO Probable aspartyl aminopeptidase OS=Ricinus communis GN=RCOM_1506700 PE=2 SV=2 Back     alignment and function desciption
 Score =  735 bits (1897), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/441 (79%), Positives = 392/441 (88%), Gaps = 15/441 (3%)

Query: 22  NWKL--ARDTFFTRNHSTIIAFAVGKKYVAGNGFHVVGAHTDSPCLKLKPVSKVTKGGYL 79
           +WKL   +  FFTRNHSTI+AFA+GKKYVAGNGF+VVGAHTDSPC+KLKPVSKVTK GYL
Sbjct: 51  DWKLELGKRYFFTRNHSTIVAFAIGKKYVAGNGFYVVGAHTDSPCIKLKPVSKVTKSGYL 110

Query: 80  EVGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHLD 139
           EVGVQ YGGGLWHTWFDRDL VAGRVI+RE K GS  YSH+LVRI+EPIMR+PTLAIHLD
Sbjct: 111 EVGVQPYGGGLWHTWFDRDLAVAGRVIVREEKHGSVSYSHRLVRIEEPIMRVPTLAIHLD 170

Query: 140 RNVNSDGFKVNTQSHLVPILATSLKEELNKVVTDS----PNERTD---------TYSSKH 186
           RNVN+DGFKVNTQSHL+P+LATS+K EL+KVV ++     +E TD           +SKH
Sbjct: 171 RNVNTDGFKVNTQSHLLPVLATSVKAELSKVVAENGTVGNDEETDGMKSSKGTTNANSKH 230

Query: 187 HSHLLQMIASQIGCRPDDICDFELQACDTQPSIVAGIKKEFIFSGRLDNLCMSFCSLKAL 246
           HS LLQMIA QIGC   DICDFELQACDTQPS++AG  KEFIFSGRLDNLCMSFCSLKAL
Sbjct: 231 HSLLLQMIAGQIGCNGSDICDFELQACDTQPSVIAGAAKEFIFSGRLDNLCMSFCSLKAL 290

Query: 247 IDSTSSEGDLEDEIGVRMVALFDHEEVGSDSAQGAGSPAMLDALSRITNSFCSNSKLIEK 306
           ID+T+S+  LE+E GVRMVALFDHEEVGSDSAQGAGSP M DALSRIT++F S+SKL+ K
Sbjct: 291 IDATASDSHLENESGVRMVALFDHEEVGSDSAQGAGSPVMFDALSRITSTFNSDSKLLRK 350

Query: 307 AIQRSFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVA 366
           AIQ+SFLVSADMAHALHPNY DKHE+NHQP++HGGLVIKHNANQRYATN+VTSF+F+E+A
Sbjct: 351 AIQKSFLVSADMAHALHPNYADKHEENHQPRMHGGLVIKHNANQRYATNSVTSFLFKEIA 410

Query: 367 SKHNLPVQDFVVRNDMACGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKHSY 426
           SKHNLPVQDFVVRNDM CGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVK+SY
Sbjct: 411 SKHNLPVQDFVVRNDMPCGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKYSY 470

Query: 427 EHFKAFFQEFSELDAKIKVDM 447
           EHFKAFF++FS LD+KI VDM
Sbjct: 471 EHFKAFFEDFSHLDSKITVDM 491
Likely to play an important role in intracellular protein and peptide metabolism.
Ricinus communis (taxid: 3988)
EC: 3EC: .EC: 4EC: .EC: 1EC: 1EC: .EC: 2EC: 1
>sp|Q9ULA0|DNPEP_HUMAN Aspartyl aminopeptidase OS=Homo sapiens GN=DNPEP PE=1 SV=1 Back     alignment and function description
>sp|Q5RBT2|DNPEP_PONAB Aspartyl aminopeptidase OS=Pongo abelii GN=DNPEP PE=2 SV=1 Back     alignment and function description
>sp|Q54M70|DNPEP_DICDI Aspartyl aminopeptidase OS=Dictyostelium discoideum GN=dnpep PE=1 SV=1 Back     alignment and function description
>sp|Q2HJH1|DNPEP_BOVIN Aspartyl aminopeptidase OS=Bos taurus GN=DNPEP PE=1 SV=1 Back     alignment and function description
>sp|Q9Z2W0|DNPEP_MOUSE Aspartyl aminopeptidase OS=Mus musculus GN=Dnpep PE=2 SV=2 Back     alignment and function description
>sp|Q2UPZ7|DNPEP_ASPOR Aspartyl aminopeptidase OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=dapA PE=1 SV=1 Back     alignment and function description
>sp|O36014|DNPEP_SCHPO Aspartyl aminopeptidase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=aap1 PE=1 SV=1 Back     alignment and function description
>sp|P38821|DNPEP_YEAST Aspartyl aminopeptidase 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=APE4 PE=1 SV=1 Back     alignment and function description
>sp|Q19087|DNPEP_CAEEL Putative aspartyl aminopeptidase OS=Caenorhabditis elegans GN=F01F1.9 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query447
224133898489 predicted protein [Populus trichocarpa] 0.953 0.871 0.8 0.0
224119622483 predicted protein [Populus trichocarpa] 0.953 0.881 0.795 0.0
115487952478 Os12g0236500 [Oryza sativa Japonica Grou 0.964 0.901 0.784 0.0
385178691491 RecName: Full=Probable aspartyl aminopep 0.953 0.867 0.795 0.0
242058139475 hypothetical protein SORBIDRAFT_03g02913 0.964 0.907 0.789 0.0
223945241475 unknown [Zea mays] gi|223947655|gb|ACN27 0.964 0.907 0.785 0.0
225456266485 PREDICTED: aspartyl aminopeptidase [Viti 0.944 0.870 0.801 0.0
388516041479 unknown [Lotus japonicus] 0.977 0.912 0.772 0.0
449440572485 PREDICTED: probable aspartyl aminopeptid 0.961 0.886 0.787 0.0
449517585485 PREDICTED: LOW QUALITY PROTEIN: probable 0.961 0.886 0.787 0.0
>gi|224133898|ref|XP_002321687.1| predicted protein [Populus trichocarpa] gi|222868683|gb|EEF05814.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  741 bits (1914), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/440 (80%), Positives = 391/440 (88%), Gaps = 14/440 (3%)

Query: 22  NWKL--ARDTFFTRNHSTIIAFAVGKKYVAGNGFHVVGAHTDSPCLKLKPVSKVTKGGYL 79
           +WKL   +  FFTRNHSTI+AFA+GKKYVAGNGF++VGAHTDSPCLKLKPVSKVTKGG+L
Sbjct: 50  DWKLEAGKRYFFTRNHSTILAFAIGKKYVAGNGFYIVGAHTDSPCLKLKPVSKVTKGGFL 109

Query: 80  EVGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHLD 139
           EVGVQTYGGGLWHTWFDRDLTVAGRVI++E KDG   YSH+LVRI+EPIMR+PT+AIHL+
Sbjct: 110 EVGVQTYGGGLWHTWFDRDLTVAGRVIVKEEKDGLVSYSHRLVRIEEPIMRVPTIAIHLE 169

Query: 140 RNVNSDGFKVNTQSHLVPILATSLKEELNK------------VVTDSPNERTDTYSSKHH 187
           R VN+DGFKVNTQS L+P+LATS+K ELNK            V  D       T SSKHH
Sbjct: 170 RTVNTDGFKVNTQSQLLPVLATSIKAELNKAAAENGPVKSEEVQADGKKSDKGTISSKHH 229

Query: 188 SHLLQMIASQIGCRPDDICDFELQACDTQPSIVAGIKKEFIFSGRLDNLCMSFCSLKALI 247
           S +L+MIA+QIGC+ DDICDFELQACDTQPS++AG  KEFIFSGRLDNLC SFCSLKALI
Sbjct: 230 SLVLEMIANQIGCKVDDICDFELQACDTQPSLIAGAAKEFIFSGRLDNLCSSFCSLKALI 289

Query: 248 DSTSSEGDLEDEIGVRMVALFDHEEVGSDSAQGAGSPAMLDALSRITNSFCSNSKLIEKA 307
           D+TSSE DLEDE GVRMVALFDHEE+GSDSAQGAGSP MLDALSRIT+SF S+SKL+ KA
Sbjct: 290 DATSSESDLEDESGVRMVALFDHEEIGSDSAQGAGSPVMLDALSRITSSFNSDSKLLPKA 349

Query: 308 IQRSFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVAS 367
           IQ+SFLVSADMAHALHPNYMDKHE+NHQPKLHGGLVIKHNANQRYATNA+TSF+FRE+A+
Sbjct: 350 IQKSFLVSADMAHALHPNYMDKHEENHQPKLHGGLVIKHNANQRYATNAITSFLFREIAT 409

Query: 368 KHNLPVQDFVVRNDMACGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKHSYE 427
           KH+LP QDFVVRNDM CGSTIGPILASGVGIRTVDVGAPQLSMHSIREMC+VDDVK+SYE
Sbjct: 410 KHDLPTQDFVVRNDMGCGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCSVDDVKYSYE 469

Query: 428 HFKAFFQEFSELDAKIKVDM 447
           HFKAFFQ+ S LDAKI VDM
Sbjct: 470 HFKAFFQDISHLDAKITVDM 489

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224119622|ref|XP_002318119.1| predicted protein [Populus trichocarpa] gi|222858792|gb|EEE96339.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|115487952|ref|NP_001066463.1| Os12g0236500 [Oryza sativa Japonica Group] gi|77554110|gb|ABA96906.1| Aspartyl aminopeptidase, putative, expressed [Oryza sativa Japonica Group] gi|113648970|dbj|BAF29482.1| Os12g0236500 [Oryza sativa Japonica Group] gi|125536203|gb|EAY82691.1| hypothetical protein OsI_37907 [Oryza sativa Indica Group] gi|125578926|gb|EAZ20072.1| hypothetical protein OsJ_35672 [Oryza sativa Japonica Group] Back     alignment and taxonomy information
>gi|385178691|sp|B9RAJ0.2|DNPEP_RICCO RecName: Full=Probable aspartyl aminopeptidase Back     alignment and taxonomy information
>gi|242058139|ref|XP_002458215.1| hypothetical protein SORBIDRAFT_03g029130 [Sorghum bicolor] gi|241930190|gb|EES03335.1| hypothetical protein SORBIDRAFT_03g029130 [Sorghum bicolor] Back     alignment and taxonomy information
>gi|223945241|gb|ACN26704.1| unknown [Zea mays] gi|223947655|gb|ACN27911.1| unknown [Zea mays] gi|414881267|tpg|DAA58398.1| TPA: hypothetical protein ZEAMMB73_107325 [Zea mays] Back     alignment and taxonomy information
>gi|225456266|ref|XP_002283475.1| PREDICTED: aspartyl aminopeptidase [Vitis vinifera] gi|297734385|emb|CBI15632.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|388516041|gb|AFK46082.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|449440572|ref|XP_004138058.1| PREDICTED: probable aspartyl aminopeptidase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449517585|ref|XP_004165826.1| PREDICTED: LOW QUALITY PROTEIN: probable aspartyl aminopeptidase-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query447
TAIR|locus:2143990477 AT5G60160 [Arabidopsis thalian 0.953 0.893 0.774 2.2e-185
TAIR|locus:2175423526 AT5G04710 [Arabidopsis thalian 0.950 0.807 0.592 7.2e-139
DICTYBASE|DDB_G0286149484 dnpep "aspartyl aminopeptidase 0.975 0.900 0.509 1e-116
UNIPROTKB|Q9ULA0475 DNPEP "Aspartyl aminopeptidase 0.966 0.909 0.522 5e-115
UNIPROTKB|E7ETB3493 DNPEP "Aspartyl aminopeptidase 0.966 0.876 0.522 1e-114
UNIPROTKB|E7EMB6410 DNPEP "Aspartyl aminopeptidase 0.914 0.997 0.539 1.5e-113
UNIPROTKB|Q2HJH1471 DNPEP "Aspartyl aminopeptidase 0.935 0.887 0.525 1.1e-112
UNIPROTKB|F1PVI2471 DNPEP "Uncharacterized protein 0.937 0.889 0.519 1.4e-112
RGD|1583848475 Dnpep "aspartyl aminopeptidase 0.919 0.865 0.539 1.6e-111
MGI|MGI:1278328473 Dnpep "aspartyl aminopeptidase 0.932 0.881 0.524 4.2e-111
TAIR|locus:2143990 AT5G60160 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1798 (638.0 bits), Expect = 2.2e-185, P = 2.2e-185
 Identities = 336/434 (77%), Positives = 387/434 (89%)

Query:    22 NWKL--ARDTFFTRNHSTIIAFAVGKKYVAGNGFHVVGAHTDSPCLKLKPVSKVTKGGYL 79
             +WKL   +  FFTRN+STI+AFA+G KYVAGNGFH++GAHTDSPCLKLKPVSK+TKGG L
Sbjct:    44 DWKLEAGKKYFFTRNYSTIVAFAIGHKYVAGNGFHIIGAHTDSPCLKLKPVSKITKGGCL 103

Query:    80 EVGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHLD 139
             EVGVQTYGGGLW+TWFDRDLTVAGRVI++E K GS  YSH+LVRI++PIMRIPTLAIHLD
Sbjct:   104 EVGVQTYGGGLWYTWFDRDLTVAGRVILKEEKAGSVSYSHRLVRIEDPIMRIPTLAIHLD 163

Query:   140 RNVNSDGFKVNTQSHLVPILATSLKEELNKVVTDSPNER-----TDTYS-SKHHSHLLQM 193
             RNVN++GFK NTQ+HLVP+LAT++K ELNK   +S          +T S SKHH  L+++
Sbjct:   164 RNVNTEGFKPNTQTHLVPVLATAIKAELNKTPAESGEHDEGKKCAETSSKSKHHPLLMEI 223

Query:   194 IASQIGCRPDDICDFELQACDTQPSIVAGIKKEFIFSGRLDNLCMSFCSLKALIDSTSSE 253
             IA+ +GC+P++ICDFELQACDTQPSI+AG  KEFIFSGRLDNLCMSFCSLKALID+TSS 
Sbjct:   224 IANALGCKPEEICDFELQACDTQPSILAGAAKEFIFSGRLDNLCMSFCSLKALIDATSSG 283

Query:   254 GDLEDEIGVRMVALFDHEEVGSDSAQGAGSPAMLDALSRITNSFCSNSKLIEKAIQRSFL 313
              DLEDE G+RMVALFDHEEVGS+SAQGAGSP M+DA+S IT+ F S++K+++KAIQ+S L
Sbjct:   284 SDLEDESGIRMVALFDHEEVGSNSAQGAGSPVMIDAMSHITSCFSSDTKVLKKAIQKSLL 343

Query:   314 VSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLPV 373
             VSADMAHALHPN+MDKHE+NHQPK+HGGLVIKHNANQRYATNAVTSFVFRE+A KHNLPV
Sbjct:   344 VSADMAHALHPNFMDKHEENHQPKMHGGLVIKHNANQRYATNAVTSFVFREIAEKHNLPV 403

Query:   374 QDFVVRNDMACGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFF 433
             QDFVVRNDM CGSTIGPILAS VGIRTVDVGAPQLSMHSIREMCA DDVKHSYEHFKAFF
Sbjct:   404 QDFVVRNDMGCGSTIGPILASSVGIRTVDVGAPQLSMHSIREMCAADDVKHSYEHFKAFF 463

Query:   434 QEFSELDAKIKVDM 447
             QEF+ LDAK+ +D+
Sbjct:   464 QEFTHLDAKLTIDV 477
GO:0004177 "aminopeptidase activity" evidence=IEA
GO:0005773 "vacuole" evidence=ISS;IDA
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0008270 "zinc ion binding" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM
GO:0046686 "response to cadmium ion" evidence=IEP
GO:0005774 "vacuolar membrane" evidence=IDA
GO:0005829 "cytosol" evidence=IDA
GO:0006635 "fatty acid beta-oxidation" evidence=RCA
GO:0010413 "glucuronoxylan metabolic process" evidence=RCA
GO:0016558 "protein import into peroxisome matrix" evidence=RCA
GO:0045492 "xylan biosynthetic process" evidence=RCA
TAIR|locus:2175423 AT5G04710 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0286149 dnpep "aspartyl aminopeptidase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|Q9ULA0 DNPEP "Aspartyl aminopeptidase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E7ETB3 DNPEP "Aspartyl aminopeptidase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E7EMB6 DNPEP "Aspartyl aminopeptidase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q2HJH1 DNPEP "Aspartyl aminopeptidase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1PVI2 DNPEP "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
RGD|1583848 Dnpep "aspartyl aminopeptidase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:1278328 Dnpep "aspartyl aminopeptidase" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q88M44APEB_PSEPK3, ., 4, ., 1, 1, ., -0.43450.83220.8671yesno
Q87YC5APEB_PSESM3, ., 4, ., 1, 1, ., -0.43560.82990.8648yesno
P59951APEB_MYCBO3, ., 4, ., 1, 1, ., -0.35290.85230.8799yesno
Q2HJH1DNPEP_BOVIN3, ., 4, ., 1, 1, ., 2, 10.51700.96420.9150yesno
Q1IDE6APEB_PSEE43, ., 4, ., 1, 1, ., -0.43950.83220.8671yesno
A4VJG1APEB_PSEU53, ., 4, ., 1, 1, ., -0.44190.82770.8624yesno
Q82F74APEB_STRAW3, ., 4, ., 1, 1, ., -0.36430.82320.8518yesno
C1ALD5APEB_MYCBT3, ., 4, ., 1, 1, ., -0.35290.85230.8799yesno
A1KGT3APEB_MYCBP3, ., 4, ., 1, 1, ., -0.35290.85230.8799yesno
Q3KFM3APEB_PSEPF3, ., 4, ., 1, 1, ., -0.42570.82990.8648yesno
A0PYH7APEB_CLONN3, ., 4, ., 1, 1, ., -0.37520.87020.8983yesno
Q50022APEB_MYCLE3, ., 4, ., 1, 1, ., -0.34450.85680.8990yesno
C1DQM8APEB_AZOVD3, ., 4, ., 1, 1, ., -0.42070.82990.8648yesno
Q19087DNPEP_CAEEL3, ., 4, ., 1, 1, ., 2, 10.43490.91720.8723yesno
Q4ZW15APEB_PSEU23, ., 4, ., 1, 1, ., -0.44050.82990.8648yesno
A5U0I9APEB_MYCTA3, ., 4, ., 1, 1, ., -0.35050.85230.8799yesno
O51572APEB_BORBU3, ., 4, ., 1, 1, ., -0.32630.85010.8983yesno
O36014DNPEP_SCHPO3, ., 4, ., 1, 1, ., 2, 10.48220.90150.8629yesno
C3K0D7APEB_PSEFS3, ., 4, ., 1, 1, ., -0.43310.82990.8648yesno
Q02Q78APEB_PSEAB3, ., 4, ., 1, 1, ., -0.44140.84110.8764yesno
B9RAJ0DNPEP_RICCO3, ., 4, ., 1, 1, ., 2, 10.79590.95300.8676N/Ano
Q48L80APEB_PSE143, ., 4, ., 1, 1, ., -0.43810.82990.8648yesno
B0KTU0APEB_PSEPG3, ., 4, ., 1, 1, ., -0.43700.83220.8671yesno
B1J1S3APEB_PSEPW3, ., 4, ., 1, 1, ., -0.43700.83220.8671yesno
Q5RBT2DNPEP_PONAB3, ., 4, ., 1, 1, ., 2, 10.52050.96640.9171yesno
Q9HYZ3APEB_PSEAE3, ., 4, ., 1, 1, ., -0.43900.84110.8764yesno
A4XRN0APEB_PSEMY3, ., 4, ., 1, 1, ., -0.44800.82990.8648yesno
O06634APEB_MYCTU3, ., 4, ., 1, 1, ., -0.35050.85230.8799yesno
B7V7X2APEB_PSEA83, ., 4, ., 1, 1, ., -0.43900.84110.8764yesno
Q9XA76APEB_STRCO3, ., 4, ., 1, 1, ., -0.34950.85450.8842yesno
Q97LF4APEB_CLOAB3, ., 4, ., 1, 1, ., -0.39460.84780.8752yesno
Q9ULA0DNPEP_HUMAN3, ., 4, ., 1, 1, ., 2, 10.52280.96640.9094yesno
Q54M70DNPEP_DICDI3, ., 4, ., 1, 1, ., 2, 10.49670.97530.9008yesno
A6V2H4APEB_PSEA73, ., 4, ., 1, 1, ., -0.43900.84110.8764yesno
A5W7K3APEB_PSEP13, ., 4, ., 1, 1, ., -0.43700.83220.8671yesno
P38821DNPEP_YEAST3, ., 4, ., 1, 1, ., 2, 10.45810.91490.8346yesno
Q9Z2W0DNPEP_MOUSE3, ., 4, ., 1, 1, ., 2, 10.53340.91720.8668yesno
Q2UPZ7DNPEP_ASPOR3, ., 4, ., 1, 1, ., 2, 10.49320.91720.8232yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.11.210.914
3rd Layer3.4.110.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query447
cd05658424 cd05658, M18_DAP, M18 Peptidase Aspartyl aminopept 0.0
PTZ00371465 PTZ00371, PTZ00371, aspartyl aminopeptidase; Provi 0.0
PRK02813428 PRK02813, PRK02813, putative aminopeptidase 2; Pro 1e-179
pfam02127425 pfam02127, Peptidase_M18, Aminopeptidase I zinc me 1e-160
COG1362437 COG1362, LAP4, Aspartyl aminopeptidase [Amino acid 1e-159
cd05639427 cd05639, M18, M18 Peptidase aminopeptidase family 1e-146
cd05659443 cd05659, M18_API, M18 Peptidase Aminopeptidase I 1e-37
PRK02256462 PRK02256, PRK02256, putative aminopeptidase 1; Pro 5e-34
cd05656336 cd05656, M42_Frv, M42 Peptidase, Endoglucanases 2e-05
cd03873237 cd03873, Zinc_peptidase_like, Zinc peptidases M18, 4e-05
pfam05343292 pfam05343, Peptidase_M42, M42 glutamyl aminopeptid 1e-04
COG1363355 COG1363, FrvX, Cellulase M and related proteins [C 1e-04
>gnl|CDD|193534 cd05658, M18_DAP, M18 Peptidase Aspartyl aminopeptidase Back     alignment and domain information 
 Score =  638 bits (1648), Expect = 0.0
 Identities = 217/415 (52%), Positives = 285/415 (68%), Gaps = 30/415 (7%)

Query: 22  NWKLARDT--FFTRNHSTIIAFAVGKKYVAGNGFHVVGAHTDSPCLKLKPVSKVTKGGYL 79
            W L      + TRN S++IAF VG+KY  GNGF +VGAHTDSPCLKLKP  ++T  GYL
Sbjct: 38  KWNLKPGGKYYVTRNGSSLIAFTVGEKYKPGNGFRIVGAHTDSPCLKLKPNPEITSEGYL 97

Query: 80  EVGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHLD 139
           ++GV+ YGGGL +TWFDRDL++AGRV++++G         KLV ID PI+RIP LAIHL+
Sbjct: 98  QLGVEVYGGGLLNTWFDRDLSLAGRVVVKDGDGK---PESKLVDIDRPILRIPNLAIHLN 154

Query: 140 RNVNSDGFKVNTQSHLVPILATSLKEELNKVVTDSPNERTDTYSSKHHSHLLQMIASQIG 199
           R VN +GFK+N Q HL+PIL    ++E                  KH   LL ++A ++G
Sbjct: 155 REVN-EGFKLNKQKHLLPILGLGEEDE------------------KHEDDLLDLLAEELG 195

Query: 200 CRPDDICDFELQACDTQPSIVAGIKKEFIFSGRLDNLCMSFCSLKALIDSTSSEGDLEDE 259
            +P+DI DF+L   DTQP  + G+  EFI S RLDNL   + +L+AL+D+ +        
Sbjct: 196 VKPEDILDFDLYLYDTQPGALGGLNDEFISSPRLDNLASVYAALEALLDAENDNS----- 250

Query: 260 IGVRMVALFDHEEVGSDSAQGAGSPAMLDALSRITNSFCSNSKLIEKAIQRSFLVSADMA 319
            G+ ++ALFD+EEVGS+S QGA SP + D L RI  +   + +   +A+ RSFL+SADMA
Sbjct: 251 -GINVIALFDNEEVGSESKQGADSPFLEDVLERIAAALGGSREEYYRALARSFLISADMA 309

Query: 320 HALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLPVQDFVVR 379
           HA+HPNY +KH+ NH+P L+GG VIK NANQRYAT+AV++ VF+E+  K  +PVQ+FV R
Sbjct: 310 HAVHPNYPEKHDPNHRPLLNGGPVIKINANQRYATDAVSAAVFKELCEKAGVPVQEFVNR 369

Query: 380 NDMACGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFFQ 434
           NDM CGSTIGPI AS +GIRTVD+G PQLSMHSIRE   V DV++     KAFF+
Sbjct: 370 NDMPCGSTIGPITASRLGIRTVDIGIPQLSMHSIRETAGVKDVEYLIRLLKAFFE 424

Peptidase M18 family, Aspartyl aminopeptidase (DAP; EC 3.4.11.21) subfamily. DAP is widely distributed in bacteria and eukaryotes, but only the mammalian aspartyl aminopeptidase has been characterized to date. DAP cleaves only unblocked N-terminal acidic amino-acid residues. It is a cytosolic enzyme and is highly conserved; for example, the human enzyme has 51% identity to an aspartyl aminopeptidase-like protein in Arabidopsis thaliana. The mammalian DAP is highly selective for hydrolysis of N-terminal aspartate or glutamate residues from peptides. Unlike glutamyl aminopeptidase (M42), DAP does not cleave simple aminoaryl-arylamide substrates. Although there is lack of understanding of the function of this enzyme, it is thought to act in concert with other aminopeptidases to facilitate protein turnover because of their restricted specificities for the N-terminal aspartic and glutamic acid, which cannot be cleaved by any other aminopeptidases. The mammalian aspartyl aminopeptidase is possibly contributing to the catabolism of peptides, including those produced by the proteasome. It may also trim the N-terminus of peptides that are intended for the MHC class I system. In humans, DAP has been implicated in the the specific function of converting angiotensin II to the vasoactive angiotensin III within the brain. Length = 424
>gnl|CDD|240387 PTZ00371, PTZ00371, aspartyl aminopeptidase; Provisional Back     alignment and domain information
>gnl|CDD|235073 PRK02813, PRK02813, putative aminopeptidase 2; Provisional Back     alignment and domain information
>gnl|CDD|216888 pfam02127, Peptidase_M18, Aminopeptidase I zinc metalloprotease (M18) Back     alignment and domain information
>gnl|CDD|224281 COG1362, LAP4, Aspartyl aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|193518 cd05639, M18, M18 Peptidase aminopeptidase family Back     alignment and domain information
>gnl|CDD|193535 cd05659, M18_API, M18 Peptidase Aminopeptidase I Back     alignment and domain information
>gnl|CDD|235018 PRK02256, PRK02256, putative aminopeptidase 1; Provisional Back     alignment and domain information
>gnl|CDD|193532 cd05656, M42_Frv, M42 Peptidase, Endoglucanases Back     alignment and domain information
>gnl|CDD|193495 cd03873, Zinc_peptidase_like, Zinc peptidases M18, M20, M28, and M42 Back     alignment and domain information
>gnl|CDD|218563 pfam05343, Peptidase_M42, M42 glutamyl aminopeptidase Back     alignment and domain information
>gnl|CDD|224282 COG1363, FrvX, Cellulase M and related proteins [Carbohydrate transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 447
KOG2596479 consensus Aminopeptidase I zinc metalloprotease (M 100.0
PTZ00371465 aspartyl aminopeptidase; Provisional 100.0
PRK02813428 putative aminopeptidase 2; Provisional 100.0
PF02127432 Peptidase_M18: Aminopeptidase I zinc metalloprotea 100.0
COG1362437 LAP4 Aspartyl aminopeptidase [Amino acid transport 100.0
PRK02256462 putative aminopeptidase 1; Provisional 100.0
PRK09864356 putative peptidase; Provisional 100.0
COG1363355 FrvX Cellulase M and related proteins [Carbohydrat 100.0
TIGR03107350 glu_aminopep glutamyl aminopeptidase. This model r 100.0
PRK09961344 exoaminopeptidase; Provisional 100.0
PF05343292 Peptidase_M42: M42 glutamyl aminopeptidase; InterP 100.0
TIGR03106343 trio_M42_hydro hydrolase, peptidase M42 family. Th 100.0
PF01546189 Peptidase_M20: Peptidase family M20/M25/M40 This f 98.64
TIGR01883361 PepT-like peptidase T-like protein. This model rep 98.34
PRK08596421 acetylornithine deacetylase; Validated 97.71
TIGR01902336 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine d 97.57
PRK00466346 acetyl-lysine deacetylase; Validated 97.55
TIGR01893477 aa-his-dipept aminoacyl-histidine dipeptidase. 97.51
PRK10199346 alkaline phosphatase isozyme conversion aminopepti 97.35
PF04389179 Peptidase_M28: Peptidase family M28; InterPro: IPR 97.3
PRK05469408 peptidase T; Provisional 97.0
PRK05111383 acetylornithine deacetylase; Provisional 96.92
TIGR01882410 peptidase-T peptidase T. This model represents a t 96.89
PRK13381404 peptidase T; Provisional 96.87
PRK12891414 allantoate amidohydrolase; Reviewed 96.62
PRK08554438 peptidase; Reviewed 96.55
PRK07338402 hypothetical protein; Provisional 95.97
PRK08652347 acetylornithine deacetylase; Provisional 95.85
PRK09290413 allantoate amidohydrolase; Reviewed 95.82
TIGR01882410 peptidase-T peptidase T. This model represents a t 95.79
PRK07473376 carboxypeptidase; Provisional 95.74
PRK12890414 allantoate amidohydrolase; Reviewed 95.72
TIGR01246370 dapE_proteo succinyl-diaminopimelate desuccinylase 95.64
PRK06837427 acetylornithine deacetylase; Provisional 95.41
PRK13983400 diaminopimelate aminotransferase; Provisional 95.27
TIGR01880400 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase 95.16
COG2195414 PepD Di- and tripeptidases [Amino acid transport a 94.9
PRK04443348 acetyl-lysine deacetylase; Provisional 94.89
PRK13009375 succinyl-diaminopimelate desuccinylase; Reviewed 94.41
PRK08651394 succinyl-diaminopimelate desuccinylase; Reviewed 94.32
PRK06915422 acetylornithine deacetylase; Validated 94.2
PRK08588377 succinyl-diaminopimelate desuccinylase; Reviewed 94.17
PRK12893412 allantoate amidohydrolase; Reviewed 94.15
TIGR03176406 AllC allantoate amidohydrolase. This enzyme cataly 94.12
PRK09133472 hypothetical protein; Provisional 93.69
PRK15026485 aminoacyl-histidine dipeptidase; Provisional 93.64
PRK13004399 peptidase; Reviewed 93.52
PRK12892412 allantoate amidohydrolase; Reviewed 93.41
PRK15026 485 aminoacyl-histidine dipeptidase; Provisional 93.26
PRK08737364 acetylornithine deacetylase; Provisional 93.05
PRK07318466 dipeptidase PepV; Reviewed 92.91
PRK13799591 unknown domain/N-carbamoyl-L-amino acid hydrolase 92.51
PRK06446436 hypothetical protein; Provisional 92.09
TIGR03526395 selenium_YgeY putative selenium metabolism hydrola 92.0
TIGR03320395 ygeY M20/DapE family protein YgeY. Members of this 91.91
PRK07906426 hypothetical protein; Provisional 91.79
TIGR01879401 hydantase amidase, hydantoinase/carbamoylase famil 91.31
PRK13590591 putative bifunctional OHCU decarboxylase/allantoat 91.2
TIGR01910375 DapE-ArgE acetylornithine deacetylase or succinyl- 91.06
PRK07079469 hypothetical protein; Provisional 90.8
PRK08652347 acetylornithine deacetylase; Provisional 90.78
PRK06133410 glutamate carboxypeptidase; Reviewed 90.69
PRK07205 444 hypothetical protein; Provisional 90.55
PRK13381404 peptidase T; Provisional 90.19
COG2234435 Iap Predicted aminopeptidases [General function pr 90.11
PRK07522385 acetylornithine deacetylase; Provisional 90.11
PRK06915422 acetylornithine deacetylase; Validated 90.08
PRK09104464 hypothetical protein; Validated 89.86
PRK13013427 succinyl-diaminopimelate desuccinylase; Reviewed 89.81
COG0624409 ArgE Acetylornithine deacetylase/Succinyl-diaminop 89.66
PRK08201456 hypothetical protein; Provisional 89.17
PRK07318 466 dipeptidase PepV; Reviewed 88.93
TIGR01910375 DapE-ArgE acetylornithine deacetylase or succinyl- 88.76
PRK08201 456 hypothetical protein; Provisional 88.26
PRK09104 464 hypothetical protein; Validated 88.1
PRK08588377 succinyl-diaminopimelate desuccinylase; Reviewed 87.94
PRK06156 520 hypothetical protein; Provisional 87.54
PRK07907449 hypothetical protein; Provisional 87.15
PRK07907 449 hypothetical protein; Provisional 86.74
TIGR01246370 dapE_proteo succinyl-diaminopimelate desuccinylase 86.64
TIGR01892364 AcOrn-deacetyl acetylornithine deacetylase (ArgE). 86.42
PRK07473376 carboxypeptidase; Provisional 86.33
PRK13983400 diaminopimelate aminotransferase; Provisional 86.1
PRK08651394 succinyl-diaminopimelate desuccinylase; Reviewed 85.89
TIGR01886466 dipeptidase dipeptidase PepV. This model represent 84.81
PRK04443348 acetyl-lysine deacetylase; Provisional 84.55
KOG2195 702 consensus Transferrin receptor and related protein 84.38
PRK13007352 succinyl-diaminopimelate desuccinylase; Reviewed 84.27
PRK08554 438 peptidase; Reviewed 84.25
PRK06133410 glutamate carboxypeptidase; Reviewed 84.13
PRK08262 486 hypothetical protein; Provisional 84.02
PRK07205444 hypothetical protein; Provisional 83.48
PRK13007352 succinyl-diaminopimelate desuccinylase; Reviewed 83.44
TIGR01892364 AcOrn-deacetyl acetylornithine deacetylase (ArgE). 82.99
TIGR01880400 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase 82.8
PRK09133 472 hypothetical protein; Provisional 81.92
PRK07338402 hypothetical protein; Provisional 81.84
PRK13009375 succinyl-diaminopimelate desuccinylase; Reviewed 81.52
TIGR01886466 dipeptidase dipeptidase PepV. This model represent 81.51
PRK07522385 acetylornithine deacetylase; Provisional 81.29
TIGR01887 447 dipeptidaselike dipeptidase, putative. This model 80.76
PRK13013427 succinyl-diaminopimelate desuccinylase; Reviewed 80.03
>KOG2596 consensus Aminopeptidase I zinc metalloprotease (M18) [Amino acid transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=1.4e-102  Score=771.10  Aligned_cols=438  Identities=60%  Similarity=0.973  Sum_probs=401.9

Q ss_pred             chhhhcCCCcc-eeccccceEEee--eEEEEccCCeEEEEEeCCcccCCCCeEEEEeecCCCceEeecCccccCCCeeEE
Q 013257            5 GVCKQWGINRF-QREKIGNWKLAR--DTFFTRNHSTIIAFAVGKKYVAGNGFHVVGAHTDSPCLKLKPVSKVTKGGYLEV   81 (447)
Q Consensus         5 ~~~~~~~~sG~-E~~~~~~w~l~~--~~~~d~~~gnlia~~~g~~~~~~~~~vmi~AH~De~g~~Vk~~~~i~~~G~~~l   81 (447)
                      ++-+++-..|| |+.|++.|.++|  +||++|++++|+||.+|++|.+++|+-+|+||+|+||++|||++.....||+++
T Consensus        37 e~k~~Ll~agF~~LsE~~~W~iepg~kyf~tRN~S~iiAFavG~ky~pgnGf~iigaHtDSpcLrlKP~Sk~s~~gylqV  116 (479)
T KOG2596|consen   37 EFKERLLKAGFKELSEKSDWQIEPGGKYFVTRNGSSIIAFAVGGKYVPGNGFSIIGAHTDSPCLRLKPVSKRSAEGYLQV  116 (479)
T ss_pred             HHHHHHHHccchhcccccCcccCCCceEEEEccCceEEEEeccCcccCCCceeEEEecCCCcceeecccccccccceEEE
Confidence            34455556889 899999999999  999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEEeCCCcccccccceeccccEEEEecCCCCCCCceeeeeeeCCCeEEecCCCcccccccccCCCCCCCccceeeeEec
Q 013257           82 GVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHLDRNVNSDGFKVNTQSHLVPILAT  161 (447)
Q Consensus        82 ~v~~yGG~~~~tw~dr~L~lagrV~i~~~~~G~~~~~~klv~~~~~~gvI~~laiHl~~~~~~~~~~~~~~~~l~idiG~  161 (447)
                      .|++|||.+|+|||||+|++||||.++...+|  +++++||++++|+..||+|||||++..| ++|++|.+++|.|++|.
T Consensus       117 gV~tYGGgiw~tWfDRDLsvaGRvivk~~~~~--~~~~~LV~v~rPllrIPtLAiHldr~~n-~~f~pn~EtqlvPil~t  193 (479)
T KOG2596|consen  117 GVETYGGGIWHTWFDRDLSVAGRVIVKEAGDG--KLIHRLVDVKRPLLRIPTLAIHLDRDVN-EGFKPNTETQLVPILGT  193 (479)
T ss_pred             EEeecCCccchhhccccccccceEEEEecCCc--ceeeeeecCCCceeeccceeeecCCccc-ccCCCCccceeeeeecc
Confidence            99999999999999999999999999963245  7999999999999999999999999988 68999999999999999


Q ss_pred             cchhhhccccCCCCCCcc--ccccccchhHHHHHHHHHcCCCCCCeeeeeeeeeecCCceeeccCCceEeecccchhhhH
Q 013257          162 SLKEELNKVVTDSPNERT--DTYSSKHHSHLLQMIASQIGCRPDDICDFELQACDTQPSIVAGIKKEFIFSGRLDNLCMS  239 (447)
Q Consensus       162 ~s~e~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~a~~~gV~~gdiv~~d~~~~~~~~~~~~Gl~~~~i~~kalDnr~g~  239 (447)
                      ...++++.+-.+++++++  .....+|.+.|+.++|+++|+++.||++||+.++|.|+++++|++++||+++|||||+||
T Consensus       194 ~~~~~~~~~e~~~~~~~~~~~~~~~~Hhp~Ll~liak~lg~~~edIvd~eL~l~Dtq~a~lgG~~~eFiFs~RLDnl~~s  273 (479)
T KOG2596|consen  194 AIPAEEEKTEKPSDDGDKPRNSSKGKHHPVLLGLIAKELGCTPEDIVDFELILYDTQKATLGGANDEFIFSPRLDNLLSS  273 (479)
T ss_pred             cCchhhhcCCCCCCCCccccccccccccHHHHHHHHHHhCCCHHHhhheeeeeecCCchhhcCcccceeecccccchhhH
Confidence            875432222111222221  346677999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhccCCCCCCCCCCceEEEEEEeccccCcccccccCCcchhhHHHHHhhccCCChHHHHHhhhcceEEEEecC
Q 013257          240 FCSLKALIDSTSSEGDLEDEIGVRMVALFDHEEVGSDSAQGAGSPAMLDALSRITNSFCSNSKLIEKAIQRSFLVSADMA  319 (447)
Q Consensus       240 ~~~leal~~~~~~~~~~~~~~~~~~~~~t~qEEVGsrga~gA~~~~~pd~l~ri~~~~~~~~~~~~~~~~~s~aIs~Dv~  319 (447)
                      |+++.||..+.+.+ ++++.+.+.+++.||+|||||.+|+||.+.|++++|+||...++...-.+.+++++||+||.||+
T Consensus       274 F~al~aLi~s~~~~-~l~~e~~ir~valfDnEEvGS~SaQGA~s~~l~~vl~Riss~~~~~~~~~~~ai~kSflvSADma  352 (479)
T KOG2596|consen  274 FCALQALIDSAEGE-SLENESGIRMVALFDNEEVGSDSAQGAGSPFLESVLRRISSLFGSFPTAFEEAIAKSFLVSADMA  352 (479)
T ss_pred             HHHHHHHHHHhcCC-CcccCCCeEEEEeccchhhcchhhccCCCccHHHHHHHHHHhcCCCchHHHHHhhhheeeehhhh
Confidence            99999998876421 34455677899999999999999999999999999999999888877889999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCccCCccEEEEcCCCccccCHHHHHHHHHHHHhCCCCEEEEEeecCCCCCCChHHHHhcCCCCc
Q 013257          320 HALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGPILASGVGIR  399 (447)
Q Consensus       320 ha~~P~~~~~~~~~~~~~LG~Gp~ik~~~~~~~~t~~~~~~~l~~~a~~~~Ip~Q~~~~r~d~~~G~T~g~i~~a~~Gi~  399 (447)
                      ||+||||+++|+.+|+|.|++||+||+++||||+||....++++++|+++++|+|.++.|||++||+|||||.+++.|++
T Consensus       353 Ha~hPNy~~kheenH~P~~h~G~vik~naNqryaTn~v~~~l~kevA~~~~vplQ~fvVrNdspcGsTIGPiLAS~~G~R  432 (479)
T KOG2596|consen  353 HAVHPNYSDKHEENHRPLLHGGPVIKVNANQRYATNSVGSALVKEVAELAKVPLQDFVVRNDSPCGSTIGPILASKTGIR  432 (479)
T ss_pred             hhcCCCchhhhhhccCCccCCCceEEEcCCcceeccchhHHHHHHHHHHcCCCceeEEEecCCCCccccchhhhhhcCce
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEechhhhccchHHhhcCHHHHHHHHHHHHHHHHHhhhhhcccccC
Q 013257          400 TVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFFQEFSELDAKIKVD  446 (447)
Q Consensus       400 t~digiP~ryMHS~~E~~~~~Di~~~~~ll~~f~~~~~~~~~~~~~~  446 (447)
                      |+|+|+|+++|||+|||++.+|++..++|+++||++|..++.++.+|
T Consensus       433 TlDlG~pqLsMHSiRe~~gs~dv~~~~~lFk~Ff~~f~sv~~~~~vd  479 (479)
T KOG2596|consen  433 TLDLGIPQLSMHSIREMCGSKDVEQAVKLFKGFFERFSSVESKLVVD  479 (479)
T ss_pred             eeecCchhhhhHHHHHHhCcccHHHHHHHHHHHHHHhhHHHHhhccC
Confidence            99999999999999999999999999999999999999999988775

>PTZ00371 aspartyl aminopeptidase; Provisional Back     alignment and domain information
>PRK02813 putative aminopeptidase 2; Provisional Back     alignment and domain information
>PF02127 Peptidase_M18: Aminopeptidase I zinc metalloprotease (M18); InterPro: IPR001948 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>COG1362 LAP4 Aspartyl aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK02256 putative aminopeptidase 1; Provisional Back     alignment and domain information
>PRK09864 putative peptidase; Provisional Back     alignment and domain information
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR03107 glu_aminopep glutamyl aminopeptidase Back     alignment and domain information
>PRK09961 exoaminopeptidase; Provisional Back     alignment and domain information
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family Back     alignment and domain information
>PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>TIGR01883 PepT-like peptidase T-like protein Back     alignment and domain information
>PRK08596 acetylornithine deacetylase; Validated Back     alignment and domain information
>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase Back     alignment and domain information
>PRK00466 acetyl-lysine deacetylase; Validated Back     alignment and domain information
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase Back     alignment and domain information
>PRK10199 alkaline phosphatase isozyme conversion aminopeptidase; Provisional Back     alignment and domain information
>PF04389 Peptidase_M28: Peptidase family M28; InterPro: IPR007484 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PRK05469 peptidase T; Provisional Back     alignment and domain information
>PRK05111 acetylornithine deacetylase; Provisional Back     alignment and domain information
>TIGR01882 peptidase-T peptidase T Back     alignment and domain information
>PRK13381 peptidase T; Provisional Back     alignment and domain information
>PRK12891 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK08554 peptidase; Reviewed Back     alignment and domain information
>PRK07338 hypothetical protein; Provisional Back     alignment and domain information
>PRK08652 acetylornithine deacetylase; Provisional Back     alignment and domain information
>PRK09290 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>TIGR01882 peptidase-T peptidase T Back     alignment and domain information
>PRK07473 carboxypeptidase; Provisional Back     alignment and domain information
>PRK12890 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade Back     alignment and domain information
>PRK06837 acetylornithine deacetylase; Provisional Back     alignment and domain information
>PRK13983 diaminopimelate aminotransferase; Provisional Back     alignment and domain information
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase Back     alignment and domain information
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism] Back     alignment and domain information
>PRK04443 acetyl-lysine deacetylase; Provisional Back     alignment and domain information
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK06915 acetylornithine deacetylase; Validated Back     alignment and domain information
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK12893 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>TIGR03176 AllC allantoate amidohydrolase Back     alignment and domain information
>PRK09133 hypothetical protein; Provisional Back     alignment and domain information
>PRK15026 aminoacyl-histidine dipeptidase; Provisional Back     alignment and domain information
>PRK13004 peptidase; Reviewed Back     alignment and domain information
>PRK12892 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK15026 aminoacyl-histidine dipeptidase; Provisional Back     alignment and domain information
>PRK08737 acetylornithine deacetylase; Provisional Back     alignment and domain information
>PRK07318 dipeptidase PepV; Reviewed Back     alignment and domain information
>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional Back     alignment and domain information
>PRK06446 hypothetical protein; Provisional Back     alignment and domain information
>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase Back     alignment and domain information
>TIGR03320 ygeY M20/DapE family protein YgeY Back     alignment and domain information
>PRK07906 hypothetical protein; Provisional Back     alignment and domain information
>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family Back     alignment and domain information
>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional Back     alignment and domain information
>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase Back     alignment and domain information
>PRK07079 hypothetical protein; Provisional Back     alignment and domain information
>PRK08652 acetylornithine deacetylase; Provisional Back     alignment and domain information
>PRK06133 glutamate carboxypeptidase; Reviewed Back     alignment and domain information
>PRK07205 hypothetical protein; Provisional Back     alignment and domain information
>PRK13381 peptidase T; Provisional Back     alignment and domain information
>COG2234 Iap Predicted aminopeptidases [General function prediction only] Back     alignment and domain information
>PRK07522 acetylornithine deacetylase; Provisional Back     alignment and domain information
>PRK06915 acetylornithine deacetylase; Validated Back     alignment and domain information
>PRK09104 hypothetical protein; Validated Back     alignment and domain information
>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism] Back     alignment and domain information
>PRK08201 hypothetical protein; Provisional Back     alignment and domain information
>PRK07318 dipeptidase PepV; Reviewed Back     alignment and domain information
>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase Back     alignment and domain information
>PRK08201 hypothetical protein; Provisional Back     alignment and domain information
>PRK09104 hypothetical protein; Validated Back     alignment and domain information
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK06156 hypothetical protein; Provisional Back     alignment and domain information
>PRK07907 hypothetical protein; Provisional Back     alignment and domain information
>PRK07907 hypothetical protein; Provisional Back     alignment and domain information
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade Back     alignment and domain information
>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE) Back     alignment and domain information
>PRK07473 carboxypeptidase; Provisional Back     alignment and domain information
>PRK13983 diaminopimelate aminotransferase; Provisional Back     alignment and domain information
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>TIGR01886 dipeptidase dipeptidase PepV Back     alignment and domain information
>PRK04443 acetyl-lysine deacetylase; Provisional Back     alignment and domain information
>KOG2195 consensus Transferrin receptor and related proteins containing the protease-associated (PA) domain [Posttranslational modification, protein turnover, chaperones; Inorganic ion transport and metabolism; General function prediction only] Back     alignment and domain information
>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK08554 peptidase; Reviewed Back     alignment and domain information
>PRK06133 glutamate carboxypeptidase; Reviewed Back     alignment and domain information
>PRK08262 hypothetical protein; Provisional Back     alignment and domain information
>PRK07205 hypothetical protein; Provisional Back     alignment and domain information
>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE) Back     alignment and domain information
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase Back     alignment and domain information
>PRK09133 hypothetical protein; Provisional Back     alignment and domain information
>PRK07338 hypothetical protein; Provisional Back     alignment and domain information
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>TIGR01886 dipeptidase dipeptidase PepV Back     alignment and domain information
>PRK07522 acetylornithine deacetylase; Provisional Back     alignment and domain information
>TIGR01887 dipeptidaselike dipeptidase, putative Back     alignment and domain information
>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query447
4dyo_A485 Crystal Structure Of Human Aspartyl Aminopeptidase 1e-128
3var_A496 Crystal Structure Of Dnpep, Znzn Form Length = 496 1e-126
2ijz_A428 Crystal Structure Of Aminopeptidase Length = 428 1e-85
4eme_A571 X-Ray Crystal Structure And Specificity Of The Plas 1e-42
1y7e_A458 The Crystal Structure Of Aminopeptidase I From Borr 1e-23
2glf_A450 Crystal Structure Of Aminipeptidase (m18 Family) Fr 7e-18
2glj_A461 Crystal Structure Of Aminopeptidase I From Clostrid 3e-16
>pdb|4DYO|A Chain A, Crystal Structure Of Human Aspartyl Aminopeptidase (Dnpep) In Complex With Aspartic Acid Hydroxamate Length = 485 Back     alignment and structure 
Iteration: 1

 Score =  454 bits (1167), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 227/431 (52%), Positives = 300/431 (69%), Gaps = 6/431 (1%)
Query: 9   QWGINRFQREKIGNWKLARDTFFTRNHSTIIAFAVGKKYVAGNGFHVVGAHTDSPCLKLK 68
           Q G +  +  +  N K     F TRN STIIAFAVG +YV GNGF ++GAHTDSPCL++K
Sbjct: 54  QAGFSELKETEKWNIKPESKYFMTRNSSTIIAFAVGGQYVPGNGFSLIGAHTDSPCLRVK 113
Query: 69  PVSKVTKGGYLEVGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPI 128
             S+ ++ G+ +VGV+TYGGG+W TWFDRDLT+AGRVI++     SG    +LV ++ PI
Sbjct: 114 RRSRRSQVGFQQVGVETYGGGIWSTWFDRDLTLAGRVIVK--CPTSGRLEQQLVHVERPI 171
Query: 129 MRIPTLAIHLDRNVNSDGFKVNTQSHLVPILATSLKEELNKVVTDSPNERTDTYSSKHHS 188
           +RIP LAIHL RN+N + F  NT+ HLVPILAT+++EEL K  T  P    +    +HHS
Sbjct: 172 LRIPHLAIHLQRNIN-ENFGPNTEMHLVPILATAIQEELEKG-TPEPGP-LNAVDERHHS 228
Query: 189 HLLQMIASQIGCRPDDICDFELQACDTQPSIVAGIKKEFIFSGRLDNLCMSFCSLKALID 248
            L+ ++ + +G  P DI + EL   DTQP+++ G   EFIF+ RLDNL   FC+L+ALID
Sbjct: 229 VLMSLLCAHLGLSPKDIVEMELCLADTQPAVLGGAYDEFIFAPRLDNLHSCFCALQALID 288
Query: 249 STSSEGDLEDEIGVRMVALFDHEEVGSDSAQGAGSPAMLDALSRITNSFCSNSKLIEKAI 308
           S +  G L  E  VRMV L+D+EEVGS+SAQGA S      L RI+ S C +    E+AI
Sbjct: 289 SCAGPGSLATEPHVRMVTLYDNEEVGSESAQGAQSLLTELVLRRISAS-CQHPTAFEEAI 347
Query: 309 QRSFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASK 368
            +SF++SADMAHA+HPNY+DKHE+NH+P  H G VIK N+ QRYA+NAV+  + REVA+K
Sbjct: 348 PKSFMISADMAHAVHPNYLDKHEENHRPLFHKGPVIKVNSKQRYASNAVSEALIREVANK 407
Query: 369 HNLPVQDFVVRNDMACGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEH 428
             +P+QD +VRND  CG+TIGPILAS +G+R +D+G+PQL+MHSIREM     V  +   
Sbjct: 408 VKVPLQDLMVRNDTPCGTTIGPILASRLGLRVLDLGSPQLAMHSIREMACTTGVLQTLTL 467
Query: 429 FKAFFQEFSEL 439
           FK FF+ F  L
Sbjct: 468 FKGFFELFPSL 478
>pdb|3VAR|A Chain A, Crystal Structure Of Dnpep, Znzn Form Length = 496 Back     alignment and structure
>pdb|2IJZ|A Chain A, Crystal Structure Of Aminopeptidase Length = 428 Back     alignment and structure
>pdb|4EME|A Chain A, X-Ray Crystal Structure And Specificity Of The Plasmodium Falciparum Malaria Aminopeptidase Length = 571 Back     alignment and structure
>pdb|1Y7E|A Chain A, The Crystal Structure Of Aminopeptidase I From Borrelia Burgdorferi B31 Length = 458 Back     alignment and structure
>pdb|2GLF|A Chain A, Crystal Structure Of Aminipeptidase (m18 Family) From Thermotoga Maritima Length = 450 Back     alignment and structure
>pdb|2GLJ|A Chain A, Crystal Structure Of Aminopeptidase I From Clostridium Acetobutylicum Length = 461 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query447
3vat_A496 Dnpep, aspartyl aminopeptidase; alpha-beta-alpha s 0.0
2ijz_A428 Probable M18-family aminopeptidase 2; putative ami 0.0
2glj_A461 Probable M18-family aminopeptidase 1; aminopeptida 0.0
2glf_A450 Probable M18-family aminopeptidase 1; putative, NY 0.0
1y7e_A458 Probable M18-family aminopeptidase 1; aminopeptida 0.0
4eme_A571 M18 aspartyl aminopeptidase; dnpep/M18/aminopeptid 1e-128
4eme_A571 M18 aspartyl aminopeptidase; dnpep/M18/aminopeptid 2e-49
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-13
2fvg_A340 Endoglucanase; TM1049, structural genomics, joint 5e-09
1y0y_A353 FRV operon protein FRVX; aminopeptidase, PDZ, hydr 6e-09
3isx_A343 Endoglucanase; TM1050, structural genomics, joint 4e-08
1vhe_A373 Aminopeptidase/glucanase homolog; structural genom 4e-08
1ylo_A348 Hypothetical protein SF2450; structural genomics, 5e-08
2vpu_A354 TET3, 354AA long hypothetical operon protein FRV; 7e-08
3kl9_A355 PEPA, glutamyl aminopeptidase; tetrahedral aminope 1e-07
1vho_A346 Endoglucanase; structural genomics, unknown functi 3e-06
3cpx_A321 Aminopeptidase, M42 family; YP_676701.1, putative 5e-06
2wyr_A332 Cobalt-activated peptidase TET1; hydrolase, large 2e-05
2gre_A349 Deblocking aminopeptidase; structural genomi prote 3e-05
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A* Length = 496 Back     alignment and structure
 Score =  579 bits (1494), Expect = 0.0
 Identities = 221/427 (51%), Positives = 296/427 (69%), Gaps = 8/427 (1%)

Query: 22  NWKLARDT--FFTRNHSTIIAFAVGKKYVAGNGFHVVGAHTDSPCLKLKPVSKVTKGGYL 79
           +W +  ++  F TRN STIIAFAVG +YV GNGF ++GAHTDSPCL++K  S+ ++ G+ 
Sbjct: 76  SWDIKPESKYFLTRNSSTIIAFAVGGQYVPGNGFSLIGAHTDSPCLRVKRRSRRSQVGFQ 135

Query: 80  EVGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHLD 139
           +VGV+TYGGG+W TWFDRDLT+AGRVI++    G      +LV +D PI+RIP LAIHL 
Sbjct: 136 QVGVETYGGGIWSTWFDRDLTLAGRVIVKCPTSGR--LEQRLVHVDRPILRIPHLAIHLQ 193

Query: 140 RNVNSDGFKVNTQSHLVPILATSLKEELNKVVTDSPNERTDTYSSKHHSHLLQMIASQIG 199
           RNVN + F  N + HLVPILATS++EEL K          +    +HHS L  ++ + +G
Sbjct: 194 RNVN-ENFGPNMEMHLVPILATSIQEELEK--GTPEPGPLNATDERHHSVLTSLLCAHLG 250

Query: 200 CRPDDICDFELQACDTQPSIVAGIKKEFIFSGRLDNLCMSFCSLKALIDSTSSEGDLEDE 259
             P+DI + EL   DTQP+++ G  +EFIF+ RLDNL   FC+L+ALIDS S+   L  +
Sbjct: 251 LSPEDILEMELCLADTQPAVLGGAYEEFIFAPRLDNLHSCFCALQALIDSCSAPASLAAD 310

Query: 260 IGVRMVALFDHEEVGSDSAQGAGSPAMLDALSRITNSFCSNSKLIEKAIQRSFLVSADMA 319
             VRM+AL+D+EEVGS+SAQGA S      L RI+ S    +   E+AI +S+++SADMA
Sbjct: 311 PHVRMIALYDNEEVGSESAQGAQSLLTELVLRRISASPQHLTAF-EEAIPKSYMISADMA 369

Query: 320 HALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLPVQDFVVR 379
           HA+HPNY+DKHE+NH+P  H G VIK N+ QRYA+NAV+  + REVAS   +P+QD +VR
Sbjct: 370 HAVHPNYLDKHEENHRPLFHKGPVIKVNSKQRYASNAVSEALIREVASSVGVPLQDLMVR 429

Query: 380 NDMACGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFFQEFSEL 439
           ND  CG+TIGPILAS +G+R +D+G+PQL+MHSIRE      V  +   FK FF+ F  L
Sbjct: 430 NDSPCGTTIGPILASRLGLRVLDLGSPQLAMHSIRETACTTGVLQTITLFKGFFELFPSL 489

Query: 440 DAKIKVD 446
              + VD
Sbjct: 490 SRSLLVD 496
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa} Length = 428 Back     alignment and structure
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum} Length = 461 Back     alignment and structure
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima} Length = 450 Back     alignment and structure
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4 Length = 458 Back     alignment and structure
>4eme_A M18 aspartyl aminopeptidase; dnpep/M18/aminopeptidase, protease, hydrolase; 2.60A {Plasmodium falciparum 3D7} Length = 571 Back     alignment and structure
>4eme_A M18 aspartyl aminopeptidase; dnpep/M18/aminopeptidase, protease, hydrolase; 2.60A {Plasmodium falciparum 3D7} Length = 571 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4 Length = 340 Back     alignment and structure
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A Length = 353 Back     alignment and structure
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima} Length = 343 Back     alignment and structure
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4 Length = 373 Back     alignment and structure
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4 Length = 348 Back     alignment and structure
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae} Length = 355 Back     alignment and structure
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4 Length = 346 Back     alignment and structure
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406} Length = 321 Back     alignment and structure
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A Length = 332 Back     alignment and structure
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4 Length = 349 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query447
3vat_A496 Dnpep, aspartyl aminopeptidase; alpha-beta-alpha s 100.0
4eme_A571 M18 aspartyl aminopeptidase; dnpep/M18/aminopeptid 100.0
2glf_A450 Probable M18-family aminopeptidase 1; putative, NY 100.0
2ijz_A428 Probable M18-family aminopeptidase 2; putative ami 100.0
2glj_A461 Probable M18-family aminopeptidase 1; aminopeptida 100.0
1y7e_A458 Probable M18-family aminopeptidase 1; aminopeptida 100.0
2vpu_A354 TET3, 354AA long hypothetical operon protein FRV; 100.0
3isx_A343 Endoglucanase; TM1050, structural genomics, joint 100.0
3kl9_A355 PEPA, glutamyl aminopeptidase; tetrahedral aminope 100.0
1y0y_A353 FRV operon protein FRVX; aminopeptidase, PDZ, hydr 100.0
1vhe_A373 Aminopeptidase/glucanase homolog; structural genom 100.0
1ylo_A348 Hypothetical protein SF2450; structural genomics, 100.0
1vho_A346 Endoglucanase; structural genomics, unknown functi 100.0
2gre_A349 Deblocking aminopeptidase; structural genomi prote 100.0
2wyr_A332 Cobalt-activated peptidase TET1; hydrolase, large 100.0
2fvg_A340 Endoglucanase; TM1049, structural genomics, joint 100.0
3cpx_A321 Aminopeptidase, M42 family; YP_676701.1, putative 100.0
2wzn_A354 TET3, 354AA long hypothetical operon protein FRV; 99.96
4h2k_A269 Succinyl-diaminopimelate desuccinylase; DAPE, MCSG 99.66
3t68_A268 Succinyl-diaminopimelate desuccinylase; DAPE, csgi 99.6
1rtq_A299 Bacterial leucyl aminopeptidase; bimetallic, zinc, 99.32
1tkj_A284 Aminopeptidase, SGAP; double-zinc metalloproteinas 99.28
1fno_A417 Peptidase T; metallo peptidase, protease, hydrolas 99.06
2ek8_A421 Aminopeptidase; metalloproteinase, hydrolase; 1.80 98.91
3gb0_A373 Peptidase T; NP_980509.1, aminopeptidase PEPT, pep 98.86
3rza_A396 Tripeptidase; phosphorylase/hydrolase-like, struct 98.84
3isz_A377 Succinyl-diaminopimelate desuccinylase; DAPE, Zn-b 98.49
1cg2_A393 Carboxypeptidase G2; metallocarboxypeptidase, hydr 98.35
3ife_A434 Peptidase T; metallopeptidase, aminopeptidase, hyd 98.23
3iib_A444 Peptidase M28; YP_926796.1, structural genomics, J 98.21
3pfo_A433 Putative acetylornithine deacetylase; metal bindin 98.12
3tx8_A369 Succinyl-diaminopimelate desuccinylase; peptidase, 98.1
3tc8_A309 Leucine aminopeptidase; phosphorylase/hydrolase-li 98.1
2qyv_A487 XAA-His dipeptidase; YP_718209.1, structural genom 97.93
3mru_A490 Aminoacyl-histidine dipeptidase; metalloprotease, 97.92
1vgy_A393 Succinyl-diaminopimelate desuccinylase; structural 97.75
3gux_A314 Putative Zn-dependent exopeptidase; aminopeptidase 97.43
1q7l_B88 Aminoacylase-1; catalysis, enzyme dimerization, si 97.35
4fai_A330 CG5976, isoform B; alpha/beta hydrolase, PGlu form 97.02
3n5f_A408 L-carbamoylase, N-carbamoyl-L-amino acid hydrolase 96.83
4fuu_A309 Leucine aminopeptidase; phosphorylase/hydrolase li 96.78
4f9u_A312 CG32412; alpha/beta hydrolase, PGlu formation, PE, 96.76
3pb6_X330 Glutaminyl-peptide cyclotransferase-like protein; 96.76
1q7l_A198 Aminoacylase-1; catalysis, enzyme dimerization, si 96.68
1z2l_A423 Allantoate amidohydrolase; ALLC, purine cataboli a 96.67
2afw_A329 Glutaminyl-peptide cyclotransferase; alpha-beta pr 96.44
3fed_A 707 Glutamate carboxypeptidase III; metallopeptidase, 95.72
3kas_A 640 Transferrin receptor protein 1; transferrin recept 95.36
2v8h_A474 Beta-alanine synthase; amidohydrolase, alpha and b 95.2
3ct9_A356 Acetylornithine deacetylase; NP_812461.1, A putati 93.35
2zog_A479 Cytosolic non-specific dipeptidase; metallopeptida 93.12
2pok_A481 Peptidase, M20/M25/M40 family; M20 family peptidas 92.66
2pok_A481 Peptidase, M20/M25/M40 family; M20 family peptidas 91.5
3rza_A396 Tripeptidase; phosphorylase/hydrolase-like, struct 91.27
2f7v_A369 Aectylcitrulline deacetylase; alpha/beta, hydrolas 91.06
3khx_A 492 Putative dipeptidase sacol1801; DAPE, metallopepti 90.91
3pfe_A472 Succinyl-diaminopimelate desuccinylase; metal bind 90.25
3pfe_A 472 Succinyl-diaminopimelate desuccinylase; metal bind 90.01
3khx_A492 Putative dipeptidase sacol1801; DAPE, metallopepti 89.98
2f7v_A369 Aectylcitrulline deacetylase; alpha/beta, hydrolas 89.74
3gb0_A373 Peptidase T; NP_980509.1, aminopeptidase PEPT, pep 89.48
1q7l_A198 Aminoacylase-1; catalysis, enzyme dimerization, si 89.27
3isz_A377 Succinyl-diaminopimelate desuccinylase; DAPE, Zn-b 89.12
2rb7_A364 Peptidase, M20/M25/M40 family; YP_387682.1, CO-cat 88.73
3n5f_A408 L-carbamoylase, N-carbamoyl-L-amino acid hydrolase 88.42
1ysj_A404 Protein YXEP; M20 family peptidase, dinuclear meta 88.35
2zog_A479 Cytosolic non-specific dipeptidase; metallopeptida 87.99
1lfw_A470 PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bac 87.86
3k9t_A435 Putative peptidase; structural genomics, joint cen 87.81
2rb7_A364 Peptidase, M20/M25/M40 family; YP_387682.1, CO-cat 87.27
3dlj_A485 Beta-Ala-His dipeptidase; CNDP1, carnosine dipepti 87.18
1xmb_A418 IAA-amino acid hydrolase homolog 2; structural gen 85.93
3dlj_A485 Beta-Ala-His dipeptidase; CNDP1, carnosine dipepti 83.49
1lfw_A470 PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bac 82.98
3mru_A490 Aminoacyl-histidine dipeptidase; metalloprotease, 81.36
1fno_A417 Peptidase T; metallo peptidase, protease, hydrolas 81.33
3tx8_A369 Succinyl-diaminopimelate desuccinylase; peptidase, 80.74
3ram_A394 HMRA protein; two-domain, catalytic (alpha-beta-al 80.56
1tkj_A284 Aminopeptidase, SGAP; double-zinc metalloproteinas 80.49
1xmb_A418 IAA-amino acid hydrolase homolog 2; structural gen 80.25
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A* Back     alignment and structure
Probab=100.00  E-value=3.4e-101  Score=807.04  Aligned_cols=435  Identities=51%  Similarity=0.849  Sum_probs=384.1

Q ss_pred             hhhhcCCCcc-eeccccceEEee--eEEEEccCCeEEEEEeCCcccCCCCeEEEEeecCCCceEeecCccccCCCeeEEe
Q 013257            6 VCKQWGINRF-QREKIGNWKLAR--DTFFTRNHSTIIAFAVGKKYVAGNGFHVVGAHTDSPCLKLKPVSKVTKGGYLEVG   82 (447)
Q Consensus         6 ~~~~~~~sG~-E~~~~~~w~l~~--~~~~d~~~gnlia~~~g~~~~~~~~~vmi~AH~De~g~~Vk~~~~i~~~G~~~l~   82 (447)
                      +.+.+...|| |+++++.|.++|  +||+.|++++||||.+|+++++++|+.||+||+|+|||+|||+|.++++||++|+
T Consensus        59 ~~~~L~~aGF~~L~e~~~w~l~~ggkyyv~rn~ssliAf~vg~~~~~~~G~~ivgaHtDSP~lklKp~p~~~~~g~~~l~  138 (496)
T 3vat_A           59 CRSRLLQAGFHELKETESWDIKPESKYFLTRNSSTIIAFAVGGQYVPGNGFSLIGAHTDSPCLRVKRRSRRSQVGFQQVG  138 (496)
T ss_dssp             HHHHHHHTTCEECCTTSCCCCCTTCEEEEEETTTEEEEEEECTTCCTTCCEEEEEEECCCCEEEEEEEEEEEETTEEEEE
T ss_pred             HHHHHHHCcCeEccccCCcccCCCCEEEEECCCcEEEEEEeCCCCCCCCCeEEEEEeccCCCccccCCccccCCCeeEEc
Confidence            3444455888 889999999888  8999998778999999988777789999999999999999999999999999999


Q ss_pred             EEEeCCCcccccccceeccccEEEEecCCCCCCCceeeeeeeCCCeEEecCCCcccccccccCCCCCCCccceeeeEecc
Q 013257           83 VQTYGGGLWHTWFDRDLTVAGRVIIREGKDGSGPYSHKLVRIDEPIMRIPTLAIHLDRNVNSDGFKVNTQSHLVPILATS  162 (447)
Q Consensus        83 v~~yGG~~~~tw~dr~L~lagrV~i~~~~~G~~~~~~klv~~~~~~gvI~~laiHl~~~~~~~~~~~~~~~~l~idiG~~  162 (447)
                      |++|||++|+||+||+|++||||.++++++|  ++.+|||++++|+.+||+|||||+++.+ +++++|+|+||.|++|..
T Consensus       139 ve~YGG~l~~tW~DR~L~laGrV~vk~~~~g--~~~~~Lv~~~~Pi~~IP~LaiHl~r~~n-~~~~~n~q~~l~pi~g~~  215 (496)
T 3vat_A          139 VETYGGGIWSTWFDRDLTLAGRVIVKCPTSG--RLEQRLVHVDRPILRIPHLAIHLQRNVN-ENFGPNMEMHLVPILATS  215 (496)
T ss_dssp             EEEESSCCGGGGTTCCEEEEEEEEEECTTTC--CEEEEEEECCSCCBBCCCCCGGGSTTTT-TCCCCCTTTTTCCEEEEH
T ss_pred             cEeCCCchhceecCCchhcceEEEEEecCCC--eEEEEEEeCCCCeEECCccccccCcchh-cccCcCcccccccEEEec
Confidence            9999999999999999999999999952156  6899999999999999999999999877 578899999999999986


Q ss_pred             chhhhccccCCCCCCccccccccchhHHHHHHHHHcCCCCCCeeeeeeeeeecCCceeeccCCceEeecccchhhhHHHH
Q 013257          163 LKEELNKVVTDSPNERTDTYSSKHHSHLLQMIASQIGCRPDDICDFELQACDTQPSIVAGIKKEFIFSGRLDNLCMSFCS  242 (447)
Q Consensus       163 s~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~gV~~gdiv~~d~~~~~~~~~~~~Gl~~~~i~~kalDnr~g~~~~  242 (447)
                      ..++++.+.  +++++......+|+..|++++++++||++||+++||+++++.+|++++|++++||.|+|||||+|||++
T Consensus       216 ~~~~~~~~~--~~~~~~~~~~~~~~~~ll~~la~~~gv~~~Div~~dl~l~d~~~~~~~Gl~~e~I~s~~lDnr~~~~~~  293 (496)
T 3vat_A          216 IQEELEKGT--PEPGPLNATDERHHSVLTSLLCAHLGLSPEDILEMELCLADTQPAVLGGAYEEFIFAPRLDNLHSCFCA  293 (496)
T ss_dssp             HHHHHHCC-------------CCSCHHHHHHHHHHHTCCGGGEEEEEEEEEECSCCEEETTTTCEEEETTHHHHHHHHHH
T ss_pred             ccccccccc--ccccccccccccccHHHHHHHHHHcCCCcCceEEEEEEEEecCcceEeccCCceEEeeccccHHHHHHH
Confidence            432211110  000011112567889999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhccCCCCCCCCCCceEEEEEEeccccCcccccccCCcchhhHHHHHhhccCCChHHHHHhhhcceEEEEecCCCC
Q 013257          243 LKALIDSTSSEGDLEDEIGVRMVALFDHEEVGSDSAQGAGSPAMLDALSRITNSFCSNSKLIEKAIQRSFLVSADMAHAL  322 (447)
Q Consensus       243 leal~~~~~~~~~~~~~~~~~~~~~t~qEEVGsrga~gA~~~~~pd~l~ri~~~~~~~~~~~~~~~~~s~aIs~Dv~ha~  322 (447)
                      +++|+++.+.+..+.+.....++++||||||||+||+||++.|+||+|+||..+ +.+.+.+.|++++|++||+|||||.
T Consensus       294 leaL~~~~~~~~~~~~~~~~~v~v~~dqEEVGs~ga~gA~s~~~pdvl~ri~~~-~~~~~~~~~~l~~S~~IS~DvahA~  372 (496)
T 3vat_A          294 LQALIDSCSAPASLAADPHVRMIALYDNEEVGSESAQGAQSLLTELVLRRISAS-PQHLTAFEEAIPKSYMISADMAHAV  372 (496)
T ss_dssp             HHHHHHHTTSHHHHHHCCSEEEEEEESCGGGTSCSSSSTTSTHHHHHHHHHHCC-SSCTTHHHHHGGGCEEEEECCEECC
T ss_pred             HHHHHhhhccccccccCCCcEEEEEEccCCcCCCcchhccccccHHHHHHHHhc-cCchHHHHHHhhcCeEEEEeCCCCC
Confidence            999998752000000013456799999999999999999999999999999977 4478899999999999999999999


Q ss_pred             CCCCCCCCCCCCCCccCCccEEEEcCCCccccCHHHHHHHHHHHHhCCCCEEEEEeecCCCCCCChHHHHhcCCCCcEEE
Q 013257          323 HPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGPILASGVGIRTVD  402 (447)
Q Consensus       323 ~P~~~~~~~~~~~~~LG~Gp~ik~~~~~~~~t~~~~~~~l~~~a~~~~Ip~Q~~~~r~d~~~G~T~g~i~~a~~Gi~t~d  402 (447)
                      ||||+++++++|.+.||+||+||++++++|++|+.+.++++++|+++|||||.++.|+|++||||+|+|++++.||||++
T Consensus       373 dPn~~~~~~~~~~~~LG~GpvIK~~~~~~y~t~~~~~~~l~~ia~~~~Ip~Q~~v~r~D~~gGgTig~i~~s~~Gi~tvd  452 (496)
T 3vat_A          373 HPNYLDKHEENHRPLFHKGPVIKVNSKQRYASNAVSEALIREVASSVGVPLQDLMVRNDSPCGTTIGPILASRLGLRVLD  452 (496)
T ss_dssp             BTTBGGGSCTTCCCCTTSCCEEECCTTTTSCCCHHHHHHHHHHHHHHTCCCEEECCCTTSCCCCCHHHHHHHHHTCEEEE
T ss_pred             CCCCcccccccCCcccCcCCEEEEcCCCCcccCHHHHHHHHHHHHHcCCCEEEEEecCCCCCcchHHHHHhcccCCcEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             echhhhccchHHhhcCHHHHHHHHHHHHHHHHHhhhhhcccccC
Q 013257          403 VGAPQLSMHSIREMCAVDDVKHSYEHFKAFFQEFSELDAKIKVD  446 (447)
Q Consensus       403 igiP~ryMHS~~E~~~~~Di~~~~~ll~~f~~~~~~~~~~~~~~  446 (447)
                      ||||+||||||+||++++|++++++|+++|++++.+++.++.||
T Consensus       453 IGiP~ryMHS~~E~~~~~D~~~~v~Ll~af~~~~~~~~~~~~~~  496 (496)
T 3vat_A          453 LGSPQLAMHSIRETACTTGVLQTITLFKGFFELFPSLSRSLLVD  496 (496)
T ss_dssp             EECEEESTTSSSEEEESHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred             ecHhhhccccHHHHhhHHHHHHHHHHHHHHHHhHHHHhhhhcCC
Confidence            99999999999999999999999999999999999999887664
>4eme_A M18 aspartyl aminopeptidase; dnpep/M18/aminopeptidase, protease, hydrolase; 2.60A {Plasmodium falciparum 3D7} Back     alignment and structure
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima} Back     alignment and structure
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa} Back     alignment and structure
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum} Back     alignment and structure
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima} Back     alignment and structure
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae} Back     alignment and structure
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A Back     alignment and structure
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A Back     alignment and structure
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406} Back     alignment and structure
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A Back     alignment and structure
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae} Back     alignment and structure
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A Back     alignment and structure
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ... Back     alignment and structure
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A Back     alignment and structure
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A Back     alignment and structure
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A* Back     alignment and structure
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987} Back     alignment and structure
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp} Back     alignment and structure
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A Back     alignment and structure
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis} Back     alignment and structure
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B} Back     alignment and structure
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris} Back     alignment and structure
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum} Back     alignment and structure
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis} Back     alignment and structure
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT} Back     alignment and structure
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus} Back     alignment and structure
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482} Back     alignment and structure
>1q7l_B Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4 Back     alignment and structure
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A* Back     alignment and structure
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus} Back     alignment and structure
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron} Back     alignment and structure
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A* Back     alignment and structure
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X* Back     alignment and structure
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4 Back     alignment and structure
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A Back     alignment and structure
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ... Back     alignment and structure
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ... Back     alignment and structure
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A Back     alignment and structure
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A Back     alignment and structure
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A* Back     alignment and structure
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae} Back     alignment and structure
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae} Back     alignment and structure
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp} Back     alignment and structure
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A Back     alignment and structure
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A Back     alignment and structure
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp} Back     alignment and structure
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp} Back     alignment and structure
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A Back     alignment and structure
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A Back     alignment and structure
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987} Back     alignment and structure
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4 Back     alignment and structure
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A Back     alignment and structure
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp} Back     alignment and structure
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus} Back     alignment and structure
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A* Back     alignment and structure
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum} Back     alignment and structure
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp} Back     alignment and structure
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens} Back     alignment and structure
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A Back     alignment and structure
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens} Back     alignment and structure
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus} Back     alignment and structure
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A Back     alignment and structure
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum} Back     alignment and structure
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus} Back     alignment and structure
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A Back     alignment and structure
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 447
d1y7ea2322 c.56.5.4 (A:4-100,A:234-458) Probable aminopeptida 8e-77
d1y7ea2322 c.56.5.4 (A:4-100,A:234-458) Probable aminopeptida 3e-11
d1y7ea1133 b.49.3.1 (A:101-233) Probable aminopeptidase ApeA 3e-41
d1y0ya2255 c.56.5.4 (A:164-351,A:6-72) Frv operon protein Frv 3e-32
d1yloa2264 c.56.5.4 (A:1-66,A:148-345) Aminopeptidase YpdE {S 1e-12
d2fvga2255 c.56.5.4 (A:1-64,A:149-339) Endoglucanase TM1049 { 9e-12
d1vhoa2248 c.56.5.4 (A:3-69,A:153-333) Putative endoglucanase 2e-09
d1vhea2275 c.56.5.4 (A:3-72,A:163-367) Hypothetical protein Y 3e-08
d2grea2233 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptid 1e-07
d1fnoa4295 c.56.5.4 (A:1-207,A:321-408) Peptidase T (tripepti 0.004
>d1y7ea2 c.56.5.4 (A:4-100,A:234-458) Probable aminopeptidase ApeA {Borrelia burgdorferi [TaxId: 139]} Length = 322 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Bacterial dinuclear zinc exopeptidases
domain: Probable aminopeptidase ApeA
species: Borrelia burgdorferi [TaxId: 139]

 Score =  240 bits (613), Expect = 8e-77
 Identities = 57/231 (24%), Positives = 108/231 (46%), Gaps = 16/231 (6%)

Query: 214 DTQPSIVAGIKKEFIFSGRLDNLCMSFCSLKALIDSTSSEGDLEDEIGVRMVALFDHEEV 273
               +   G  K  I +   D+    F SL+++ D   +           +  L D EE+
Sbjct: 99  PAGTAKDVGFDKALIGAYGQDDKICVFTSLESIFDLEETPN------KTAICFLVDKEEI 152

Query: 274 GSDSAQGAGSPAMLDALSRITNSFCSNS---KLIEKAIQRSFLVSADMAHALHPNYMDKH 330
           GS  + G  S  +   +S +      +      ++KA+  S  +SAD+  A++P +   H
Sbjct: 153 GSTGSTGLDSRYLEYFVSDMIFKIKKSEYNNLHVQKALWNSKSISADVCAAINPLFSSVH 212

Query: 331 EDNHQPKLHGGLVI-KHNANQRYAT----NAVTSFVFREVASKHNLPVQDFVV-RNDMAC 384
           ++ + P+L  G+ I K+  +   +     +A      R++ +K+N+  Q   + + +   
Sbjct: 213 DEQNAPQLGYGIPIMKYTGHGGKSMASDADAELVSYIRQLLNKNNIAWQVATLGKVEEGG 272

Query: 385 GSTIGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFFQE 435
           G T+   LA   GIRT+D+G   +SMHS  E+ +  D+ ++Y  +KAF++E
Sbjct: 273 GGTVAKFLAG-YGIRTIDMGPAVISMHSPMEITSKFDLYNAYLAYKAFYRE 322
>d1y7ea2 c.56.5.4 (A:4-100,A:234-458) Probable aminopeptidase ApeA {Borrelia burgdorferi [TaxId: 139]} Length = 322 Back     information, alignment and structure
>d1y7ea1 b.49.3.1 (A:101-233) Probable aminopeptidase ApeA {Borrelia burgdorferi [TaxId: 139]} Length = 133 Back     information, alignment and structure
>d1y0ya2 c.56.5.4 (A:164-351,A:6-72) Frv operon protein FrvX, catalytic domain {Pyrococcus horikoshii [TaxId: 53953]} Length = 255 Back     information, alignment and structure
>d1yloa2 c.56.5.4 (A:1-66,A:148-345) Aminopeptidase YpdE {Shigella flexneri [TaxId: 623]} Length = 264 Back     information, alignment and structure
>d2fvga2 c.56.5.4 (A:1-64,A:149-339) Endoglucanase TM1049 {Thermotoga maritima [TaxId: 2336]} Length = 255 Back     information, alignment and structure
>d1vhoa2 c.56.5.4 (A:3-69,A:153-333) Putative endoglucanase TM1048, catalytic domain {Thermotoga maritima [TaxId: 2336]} Length = 248 Back     information, alignment and structure
>d1vhea2 c.56.5.4 (A:3-72,A:163-367) Hypothetical protein YsdC, catalytic domain {Bacillus subtilis [TaxId: 1423]} Length = 275 Back     information, alignment and structure
>d2grea2 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptidase YhfE {Bacillus cereus [TaxId: 1396]} Length = 233 Back     information, alignment and structure
>d1fnoa4 c.56.5.4 (A:1-207,A:321-408) Peptidase T (tripeptidase), catalytic domain {Salmonella typhimurium [TaxId: 90371]} Length = 295 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query447
d1y7ea2322 Probable aminopeptidase ApeA {Borrelia burgdorferi 100.0
d1y0ya2255 Frv operon protein FrvX, catalytic domain {Pyrococ 100.0
d1yloa2264 Aminopeptidase YpdE {Shigella flexneri [TaxId: 623 100.0
d1vhoa2248 Putative endoglucanase TM1048, catalytic domain {T 100.0
d2grea2233 Deblocking aminopeptidase YhfE {Bacillus cereus [T 99.97
d2fvga2255 Endoglucanase TM1049 {Thermotoga maritima [TaxId: 99.97
d1vhea2275 Hypothetical protein YsdC, catalytic domain {Bacil 99.95
d1y7ea1133 Probable aminopeptidase ApeA {Borrelia burgdorferi 99.92
d2grea1113 Deblocking aminopeptidase YhfE {Bacillus cereus [T 99.79
d1fnoa4295 Peptidase T (tripeptidase), catalytic domain {Salm 99.73
d1y0ya191 Frv operon protein FrvX {Pyrococcus horikoshii [Ta 99.63
d1vhea190 Hypothetical protein YsdC {Bacillus subtilis [TaxI 99.62
d2fvga184 Endoglucanase TM1049 {Thermotoga maritima [TaxId: 99.52
d1vhoa183 Putative endoglucanase TM1048 {Thermotoga maritima 99.41
d1yloa181 Aminopeptidase YpdE {Shigella flexneri [TaxId: 623 99.38
d1z2la1293 Allantoate amidohydrolase AllC catalytic domain {E 98.05
d1cg2a1276 Carboxypeptidase G2, catalytic domain {Pseudomonas 97.71
d1tkja1277 Aminopeptidase {Streptomyces griseus [TaxId: 1911] 97.63
g1q7l.1280 Aminoacylase-1, catalytic domain {Human (Homo sapi 97.51
d1rtqa_291 Aminopeptidase {Aeromonas proteolytica [TaxId: 671 97.51
d1y0ya2255 Frv operon protein FrvX, catalytic domain {Pyrococ 96.55
d2afwa1329 Glutaminyl-peptide cyclotransferase, QPCT {Human ( 96.33
d1lfwa1272 Aminopeptidase PepV {Lactobacillus delbrueckii [Ta 95.96
d1r3na1322 Peptidase-like beta-alanine synthase, catalytic do 95.69
d1de4c3294 Transferrin receptor ectodomain, protease-like dom 95.66
d3bi1a3304 Glutamate carboxypeptidase II FOLH1 {Human (Homo s 95.4
d1z2la1293 Allantoate amidohydrolase AllC catalytic domain {E 85.89
d1r3na1322 Peptidase-like beta-alanine synthase, catalytic do 83.96
>d1y7ea2 c.56.5.4 (A:4-100,A:234-458) Probable aminopeptidase ApeA {Borrelia burgdorferi [TaxId: 139]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Bacterial dinuclear zinc exopeptidases
domain: Probable aminopeptidase ApeA
species: Borrelia burgdorferi [TaxId: 139]

Probab=100.00  E-value=6.4e-61  Score=476.80  Aligned_cols=207  Identities=28%  Similarity=0.399  Sum_probs=163.7

Q ss_pred             ccCCceEeecccchhhhHHHHHHHHHhccCCCCCCCCCCceEEEEEEeccccCcccccccCCcchhhHHHHHhhccCC--
Q 013257          222 GIKKEFIFSGRLDNLCMSFCSLKALIDSTSSEGDLEDEIGVRMVALFDHEEVGSDSAQGAGSPAMLDALSRITNSFCS--  299 (447)
Q Consensus       222 Gl~~~~i~~kalDnr~g~~~~leal~~~~~~~~~~~~~~~~~~~~~t~qEEVGsrga~gA~~~~~pd~l~ri~~~~~~--  299 (447)
                      |++++||.|+|||||+|||++++||+++.+.      +..+.++++||||||||+|++||.+.|++++|+||+.+++.  
T Consensus       107 G~d~efi~s~rlDd~~~~~~~l~Ali~~~~~------~~~~~v~~~~D~EEIGS~s~~GA~s~~l~~~l~ri~~~l~~~~  180 (322)
T d1y7ea2         107 GFDKALIGAYGQDDKICVFTSLESIFDLEET------PNKTAICFLVDKEEIGSTGSTGLDSRYLEYFVSDMIFKIKKSE  180 (322)
T ss_dssp             TTTTCEEEESSHHHHHHHHHHHHHHSSSSCC------CSSCEECCCBCSTTC--------CTTHHHHHHHHHHHHHSSTT
T ss_pred             ccccceeeccCCccHHHHHHHHHHHHhhhcC------CCceEEEEEecccccCCCccccccCccHHHHHHHHHHHhcCCC
Confidence            4567899999999999999999999876531      34567889999999999999999999999999999998884  


Q ss_pred             -ChHHHHHhhhcceEEEEecCCCCCCCCCCCCCCCCCCccCCccEE-EEcCCCcc----ccCHHHHHHHHHHHHhCCCCE
Q 013257          300 -NSKLIEKAIQRSFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVI-KHNANQRY----ATNAVTSFVFREVASKHNLPV  373 (447)
Q Consensus       300 -~~~~~~~~~~~s~aIs~Dv~ha~~P~~~~~~~~~~~~~LG~Gp~i-k~~~~~~~----~t~~~~~~~l~~~a~~~~Ip~  373 (447)
                       ....+.+++++|++||+||+||+||||+++|+++|.+.||+||+| |++.++++    .+++++.++++++|++++|||
T Consensus       181 ~~~~~~~~al~~S~~iSaDvahA~hPny~~~~d~~~~~~lg~G~~i~k~~~~~~~~~~~~a~~~~~~~~~~ia~~~~Ip~  260 (322)
T d1y7ea2         181 YNNLHVQKALWNSKSISADVCAAINPLFSSVHDEQNAPQLGYGIPIMKYTGHGGKSMASDADAELVSYIRQLLNKNNIAW  260 (322)
T ss_dssp             CCTHHHHHHHHHCEEEECCCEECCCC-------CTTSCCTTSCEEEEEEC-----------CHHHHHHHHHHHHHHTCCE
T ss_pred             ccchhHHHHHhhceeeeccccccccCCCccccccccccccCCCceEEEecCCCccccccccchHHHHHHHHHHHhcCCCe
Confidence             456789999999999999999999999999999999999999988 55666544    347899999999999999999


Q ss_pred             EEEEe-ecCCCCCCChHHHHhcCCCCcEEEechhhhccchHHhhcCHHHHHHHHHHHHHHHHH
Q 013257          374 QDFVV-RNDMACGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFFQE  435 (447)
Q Consensus       374 Q~~~~-r~d~~~G~T~g~i~~a~~Gi~t~digiP~ryMHS~~E~~~~~Di~~~~~ll~~f~~~  435 (447)
                      |.++. |+|++||||+|++. ++.||||+|||+|+|||||+|||++++|++++++|+++||++
T Consensus       261 Q~~~v~r~d~~gGsTig~i~-a~~Gi~tvdiGiP~l~MHS~rE~~~~~D~~~~~~l~~aF~ee  322 (322)
T d1y7ea2         261 QVATLGKVEEGGGGTVAKFL-AGYGIRTIDMGPAVISMHSPMEITSKFDLYNAYLAYKAFYRE  322 (322)
T ss_dssp             EEEEECC-----CHHHHHHH-HHHTCEEEEECCEEBSTTSSSEEEEHHHHHHHHHHHHHTTTC
T ss_pred             eEEEeccCCCCCcchHHHHH-hcCCCCEEEcCHHHhhhhHHHHHhchhhHHHHHHHHHHHhcC
Confidence            99864 99999999999986 679999999999999999999999999999999999999863
>d1y0ya2 c.56.5.4 (A:164-351,A:6-72) Frv operon protein FrvX, catalytic domain {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1yloa2 c.56.5.4 (A:1-66,A:148-345) Aminopeptidase YpdE {Shigella flexneri [TaxId: 623]} Back     information, alignment and structure
>d1vhoa2 c.56.5.4 (A:3-69,A:153-333) Putative endoglucanase TM1048, catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2grea2 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptidase YhfE {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d2fvga2 c.56.5.4 (A:1-64,A:149-339) Endoglucanase TM1049 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1vhea2 c.56.5.4 (A:3-72,A:163-367) Hypothetical protein YsdC, catalytic domain {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1y7ea1 b.49.3.1 (A:101-233) Probable aminopeptidase ApeA {Borrelia burgdorferi [TaxId: 139]} Back     information, alignment and structure
>d2grea1 b.49.3.1 (A:74-186) Deblocking aminopeptidase YhfE {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1fnoa4 c.56.5.4 (A:1-207,A:321-408) Peptidase T (tripeptidase), catalytic domain {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1y0ya1 b.49.3.1 (A:73-163) Frv operon protein FrvX {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1vhea1 b.49.3.1 (A:73-162) Hypothetical protein YsdC {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2fvga1 b.49.3.1 (A:65-148) Endoglucanase TM1049 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1vhoa1 b.49.3.1 (A:70-152) Putative endoglucanase TM1048 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1yloa1 b.49.3.1 (A:67-147) Aminopeptidase YpdE {Shigella flexneri [TaxId: 623]} Back     information, alignment and structure
>d1z2la1 c.56.5.4 (A:4-212,A:330-413) Allantoate amidohydrolase AllC catalytic domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1cg2a1 c.56.5.4 (A:26-213,A:327-414) Carboxypeptidase G2, catalytic domain {Pseudomonas sp., strain rs-16 [TaxId: 306]} Back     information, alignment and structure
>d1tkja1 c.56.5.4 (A:1-277) Aminopeptidase {Streptomyces griseus [TaxId: 1911]} Back     information, alignment and structure
>d1rtqa_ c.56.5.4 (A:) Aminopeptidase {Aeromonas proteolytica [TaxId: 671]} Back     information, alignment and structure
>d1y0ya2 c.56.5.4 (A:164-351,A:6-72) Frv operon protein FrvX, catalytic domain {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d2afwa1 c.56.5.8 (A:33-361) Glutaminyl-peptide cyclotransferase, QPCT {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1lfwa1 c.56.5.4 (A:1-186,A:383-468) Aminopeptidase PepV {Lactobacillus delbrueckii [TaxId: 1584]} Back     information, alignment and structure
>d1r3na1 c.56.5.4 (A:18-247,A:364-455) Peptidase-like beta-alanine synthase, catalytic domain {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} Back     information, alignment and structure
>d1de4c3 c.56.5.5 (C:122-189,C:383-608) Transferrin receptor ectodomain, protease-like domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3bi1a3 c.56.5.5 (A:57-117,A:351-593) Glutamate carboxypeptidase II FOLH1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1z2la1 c.56.5.4 (A:4-212,A:330-413) Allantoate amidohydrolase AllC catalytic domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1r3na1 c.56.5.4 (A:18-247,A:364-455) Peptidase-like beta-alanine synthase, catalytic domain {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} Back     information, alignment and structure