Citrus Sinensis ID: 013284
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 446 | ||||||
| 224079910 | 441 | hypothetical protein POPTRDRAFT_1076074 | 0.968 | 0.979 | 0.737 | 0.0 | |
| 356545636 | 426 | PREDICTED: uncharacterized protein LOC10 | 0.948 | 0.992 | 0.714 | 0.0 | |
| 388513303 | 436 | unknown [Lotus japonicus] | 0.959 | 0.981 | 0.674 | 0.0 | |
| 307136485 | 442 | hypothetical protein [Cucumis melo subsp | 0.809 | 0.816 | 0.787 | 1e-179 | |
| 449447464 | 441 | PREDICTED: uncharacterized protein LOC10 | 0.966 | 0.977 | 0.687 | 1e-179 | |
| 449482260 | 378 | PREDICTED: uncharacterized LOC101210676 | 0.804 | 0.949 | 0.785 | 1e-178 | |
| 356573657 | 435 | PREDICTED: uncharacterized protein LOC10 | 0.930 | 0.954 | 0.699 | 1e-176 | |
| 359488348 | 509 | PREDICTED: uncharacterized protein LOC10 | 0.964 | 0.844 | 0.683 | 1e-176 | |
| 356551072 | 433 | PREDICTED: uncharacterized protein LOC10 | 0.937 | 0.965 | 0.672 | 1e-173 | |
| 356573883 | 425 | PREDICTED: uncharacterized protein LOC10 | 0.923 | 0.969 | 0.654 | 1e-171 |
| >gi|224079910|ref|XP_002305969.1| hypothetical protein POPTRDRAFT_1076074 [Populus trichocarpa] gi|222848933|gb|EEE86480.1| hypothetical protein POPTRDRAFT_1076074 [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 693 bits (1789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/438 (73%), Positives = 369/438 (84%), Gaps = 6/438 (1%)
Query: 9 HFSQSPRTPKIVFTITITLIILAIISLHYPLSGNPIFGFSKYYSSPSPEPSSPSSLNNND 68
H + TP I T+T TL++ ++ PL + S S S SS
Sbjct: 10 HHALRKNTPTIALTVTFTLVLFTVV----PLCYPLLGYPLYLLKSFSKSQISISSYV--A 63
Query: 69 SDQGSIKEVEGSEKCDIFSGEWVPNPEGPYYTNTTCWAIHEHQNCMKYGRPDTDFMKWRW 128
GSI E E +KCDIF+GEW+PNP PYYTNTTCWAIHEHQNCMKYGRPDT FMKWRW
Sbjct: 64 VKYGSIFEHESEQKCDIFTGEWIPNPHAPYYTNTTCWAIHEHQNCMKYGRPDTGFMKWRW 123
Query: 129 KPDGCELPIFNPSQFLEIVRGKSMAFVGDSVARNQMQSLICLLSRVEYPVDVSYTPEERF 188
+PDGCELP+FNP+QFLEIV+GKSMAFVGDSV RNQMQSLICLLSRVEYP+DVSYTP+E F
Sbjct: 124 QPDGCELPVFNPAQFLEIVKGKSMAFVGDSVGRNQMQSLICLLSRVEYPIDVSYTPDEHF 183
Query: 189 KRWRYTSYNFTLATFWTPHLVKSKEADSDGPTNTGLFNLYLDEFDEEWTTQIDDFDFLII 248
KRWRY SYNFTLATFWTPHLVK++E D+ GPT+TGLFNLYLDEFDE WTTQI++FD++II
Sbjct: 184 KRWRYPSYNFTLATFWTPHLVKAEETDAYGPTHTGLFNLYLDEFDEGWTTQIEEFDYVII 243
Query: 249 SAGHWFFRPMVYYENNKIVGCKYCLLDNVTDMKMFYGYRSAFRTAFKAIYSLENYKGITF 308
+AGHWF+RP VYYEN ++VGC++CLL+NVTD+ M++GYR AFRTAF+A+ SLENYKGITF
Sbjct: 244 NAGHWFYRPCVYYENRQVVGCRFCLLENVTDLPMYFGYRKAFRTAFRALNSLENYKGITF 303
Query: 309 LRTFAPSHFENGLWNQGGNCVRTRPFKSNETTLEGDNLELYMIQIEEFKAAEKEGQRRGK 368
LRTFAPSHFENG WN+GGNCVR RPF+SNET+LEG N ELYM Q+EEFK AEKEG++RG
Sbjct: 304 LRTFAPSHFENGEWNKGGNCVRRRPFRSNETSLEGINFELYMTQLEEFKLAEKEGKKRGL 363
Query: 369 RFRLLDTTQAMLLRPDGHPSRYGHWPHENVTLYNDCVHWCLPGPIDTWSDFLLEMLKMEG 428
RFRLLDTTQAMLLRPDGHPSRYGHWPHENVTLYNDCVHWCLPGPIDTW+DFLLEMLKMEG
Sbjct: 364 RFRLLDTTQAMLLRPDGHPSRYGHWPHENVTLYNDCVHWCLPGPIDTWNDFLLEMLKMEG 423
Query: 429 IRSYEDKLYPSDRKMRFR 446
+RSYE+KL SDRKM+ R
Sbjct: 424 VRSYEEKLDLSDRKMKLR 441
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356545636|ref|XP_003541243.1| PREDICTED: uncharacterized protein LOC100811842 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|388513303|gb|AFK44713.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
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| >gi|307136485|gb|ADN34286.1| hypothetical protein [Cucumis melo subsp. melo] | Back alignment and taxonomy information |
|---|
| >gi|449447464|ref|XP_004141488.1| PREDICTED: uncharacterized protein LOC101210676 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|449482260|ref|XP_004156230.1| PREDICTED: uncharacterized LOC101210676 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|356573657|ref|XP_003554974.1| PREDICTED: uncharacterized protein LOC100817694 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|359488348|ref|XP_002279300.2| PREDICTED: uncharacterized protein LOC100242952 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|356551072|ref|XP_003543902.1| PREDICTED: uncharacterized protein LOC100814731 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356573883|ref|XP_003555085.1| PREDICTED: uncharacterized protein LOC100820191 [Glycine max] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 446 | ||||||
| TAIR|locus:2146077 | 426 | TBL19 "AT5G15900" [Arabidopsis | 0.809 | 0.847 | 0.681 | 1.4e-144 | |
| TAIR|locus:2146062 | 526 | TBL21 "AT5G15890" [Arabidopsis | 0.769 | 0.652 | 0.621 | 3.9e-131 | |
| TAIR|locus:2091388 | 414 | TBL22 "AT3G28150" [Arabidopsis | 0.764 | 0.823 | 0.459 | 1.7e-91 | |
| TAIR|locus:2076909 | 373 | TBL20 "AT3G02440" [Arabidopsis | 0.542 | 0.648 | 0.624 | 4.7e-87 | |
| TAIR|locus:2035342 | 456 | TBL25 "AT1G01430" [Arabidopsis | 0.771 | 0.754 | 0.433 | 3.3e-86 | |
| TAIR|locus:2125048 | 442 | TBL26 "AT4G01080" [Arabidopsis | 0.751 | 0.757 | 0.452 | 1.1e-85 | |
| TAIR|locus:2128489 | 430 | TBL24 "AT4G23790" [Arabidopsis | 0.771 | 0.8 | 0.410 | 7.4e-82 | |
| TAIR|locus:2136113 | 432 | TBL23 "AT4G11090" [Arabidopsis | 0.798 | 0.824 | 0.413 | 1.6e-79 | |
| TAIR|locus:2020628 | 416 | TBL27 "TRICHOME BIREFRINGENCE- | 0.775 | 0.831 | 0.395 | 7.9e-78 | |
| TAIR|locus:2153077 | 501 | YLS7 "AT5G51640" [Arabidopsis | 0.813 | 0.724 | 0.360 | 4.1e-65 |
| TAIR|locus:2146077 TBL19 "AT5G15900" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1413 (502.5 bits), Expect = 1.4e-144, P = 1.4e-144
Identities = 252/370 (68%), Positives = 297/370 (80%)
Query: 77 VEGSEKCDIFSGEWVPNPEGPYYTNTTCWAIHEHQNCMKYGRPDTDFMKWRWKPDGCE-- 134
V + CDIFSGEWVPNPE PYYTNTTCWAIHEHQNCMK+GRPDTDF+KW+WKP GCE
Sbjct: 61 VTSHDSCDIFSGEWVPNPEAPYYTNTTCWAIHEHQNCMKFGRPDTDFIKWKWKPYGCEDG 120
Query: 135 LPIFNPSQFLEIVRGKSMAFVGDSVARNQMQSLICLLSRVEYPVDVSYTPEERFKRWRYT 194
LP+F+P +FLEIVRGK+MAFVGDSV+RN MQSLICLLS+VEYP+D S ++ FKRW Y
Sbjct: 121 LPVFDPVRFLEIVRGKTMAFVGDSVSRNHMQSLICLLSQVEYPMDASVKNDDYFKRWTYE 180
Query: 195 SYNFTLATFWTPHLVKSKEADSDGPTNTGLFNLYLDEFDEEWTTQIDDFDFLIISAGHWF 254
+YNFT+A FWTPHLVKSKE D P + +F+LYLDE DE WT I DFDF+IIS+GHW
Sbjct: 181 TYNFTIAAFWTPHLVKSKEPDQTQPKHIDIFDLYLDEADESWTADIGDFDFVIISSGHWH 240
Query: 255 FRPMVYYENNKIVGCKYCLLDNVTDMKMFYGYRSAFRTAFKAIYSLENYKGITFLRTFAP 314
+RP VYYEN I GC YC L N+TD+ MFYGYR AFRTAFKAI E++KG+ +LR+FAP
Sbjct: 241 YRPSVYYENRTITGCHYCQLPNITDLTMFYGYRKAFRTAFKAILDSESFKGVMYLRSFAP 300
Query: 315 SHFENGLWNQGGNCVRTRPFKSNETTLEGDNLELYMIQIEEFKAAEKEGQRRGKRFRLLD 374
SHFE GLWN+GG+C+R +P++SNET E ++L+ IQ+EEF AE+E +++GKR RLLD
Sbjct: 301 SHFEGGLWNEGGDCLRKQPYRSNETQDE-TTMKLHKIQLEEFWRAEEEAKKKGKRLRLLD 359
Query: 375 TTQAMLLRPDGHPSRYGHWPHENVTLYNDCVHWCLPGPIDTWSDFLLEMLKMEGIRSYED 434
TTQAM LRPDGHPSRYGH P NVTLYNDCVHWCLPGPID +DFLL MLK E ED
Sbjct: 360 TTQAMWLRPDGHPSRYGHIPEANVTLYNDCVHWCLPGPIDNLNDFLLAMLKRE-----ED 414
Query: 435 KLYPSD-RKM 443
K + + RKM
Sbjct: 415 KGFLAQVRKM 424
|
|
| TAIR|locus:2146062 TBL21 "AT5G15890" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2091388 TBL22 "AT3G28150" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2076909 TBL20 "AT3G02440" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2035342 TBL25 "AT1G01430" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2125048 TBL26 "AT4G01080" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2128489 TBL24 "AT4G23790" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2136113 TBL23 "AT4G11090" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2020628 TBL27 "TRICHOME BIREFRINGENCE-LIKE 27" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2153077 YLS7 "AT5G51640" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| gw1.IV.4155.1 | hypothetical protein (350 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 446 | |||
| pfam13839 | 270 | pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Estera | 1e-92 | |
| PLN02629 | 387 | PLN02629, PLN02629, powdery mildew resistance 5 | 1e-40 | |
| pfam14416 | 55 | pfam14416, PMR5N, PMR5 N terminal Domain | 1e-27 |
| >gnl|CDD|222410 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
Score = 280 bits (719), Expect = 1e-92
Identities = 110/291 (37%), Positives = 144/291 (49%), Gaps = 22/291 (7%)
Query: 135 LPIFNPSQFLEIVRGKSMAFVGDSVARNQMQSLICLLSRVEYPVDVSYTPEERFKRWRYT 194
LP F+ QFLE +RGK + FVGDS++RNQ +SL+CLLS+VE P + + R R+R+
Sbjct: 1 LPRFDAQQFLERLRGKRVVFVGDSLSRNQWESLVCLLSQVEPPKGKTLERDGRLFRFRFK 60
Query: 195 SYNFTLATFWTPHLVKSKEADSDGPTNTGLFNLYLDEFDEEWTTQIDDFDFLIISAGHWF 254
YN T+ +W+P LV +SD L LD DE+W+ D L+ ++GHW+
Sbjct: 61 DYNVTIEFYWSPFLV-----ESDNAEEGK-RVLKLDSIDEKWSKLWPGADVLVFNSGHWW 114
Query: 255 FRPMVYYENNKIVGCKYCLLDNVTDMKMFYGYRSAFRTAFKAIYS-LENYKGITFLRTFA 313
VY G YC N +M YR A T K + L K F RTF+
Sbjct: 115 LHRKVYI------GWDYCQKSNYKEMGFLDAYRKALETWAKWVDVNLPPSKTRVFFRTFS 168
Query: 314 PSHFENGLWNQGGNCVRTRPFKSNETTLEGDNLELYMIQIEEFKAAEKEGQRRGKRFRLL 373
P HFE G WN GG+C T P + +G E+ I E A +LL
Sbjct: 169 PVHFEGGEWNTGGSCYETEPLLG--SEYKGLTPEMIDIVNEVLSRAA-----MKTPVKLL 221
Query: 374 DTTQAMLLRPDGHPSRYGHWPHENVTLYNDCVHWCLPGPIDTWSDFLLEML 424
D T R DGHPS Y DC+HWCLPG DTW++ LL +L
Sbjct: 222 DITLLSQYRKDGHPSVYRKPGPPKKE--QDCLHWCLPGVPDTWNELLLALL 270
|
The PC-Esterase family is comprised of Cas1p, the Homo sapiens C7orf58, Arabidopsis thaliana PMR5 and a group of plant freezing resistance/coldacclimatization proteins typified by Arabidopsis thaliana ESKIMO1, animal FAM55D proteins, and animal FAM113 proteins. The PC-Esterase family has features that are both similar and different from the canonical GDSL/SGNH superfamily. The members of this family are predicted to have Acyl esterase activity and predicted to modify cell-surface biopolymers such as glycans and glycoproteins. The Cas1p protein has a Cas1_AcylT domain, in addition, with the opposing acyltransferase activity. The C7orf58 family has a ATP-Grasp domain fused to the PC-Esterase and is the first identified secreted tubulin-tyrosine ligase like enzyme in eukaryotes. The plant family with PMR5, ESK1, TBL3 etc have a N-terminal C rich potential sugar binding domain followed by the PC-Esterase domain. Length = 270 |
| >gnl|CDD|215338 PLN02629, PLN02629, powdery mildew resistance 5 | Back alignment and domain information |
|---|
| >gnl|CDD|206583 pfam14416, PMR5N, PMR5 N terminal Domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 446 | |||
| PLN02629 | 387 | powdery mildew resistance 5 | 100.0 | |
| PF13839 | 263 | PC-Esterase: GDSL/SGNH-like Acyl-Esterase family f | 100.0 | |
| PF14416 | 55 | PMR5N: PMR5 N terminal Domain | 99.93 | |
| cd01842 | 183 | SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG | 98.12 | |
| cd01841 | 174 | NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfa | 96.17 | |
| cd01829 | 200 | SGNH_hydrolase_peri2 SGNH_peri2; putative periplas | 95.9 | |
| cd01834 | 191 | SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SG | 95.08 | |
| cd01820 | 214 | PAF_acetylesterase_like PAF_acetylhydrolase (PAF-A | 94.64 | |
| cd04502 | 171 | SGNH_hydrolase_like_7 Members of the SGNH-hydrolas | 83.88 | |
| cd01827 | 188 | sialate_O-acetylesterase_like1 sialate O-acetylest | 83.29 | |
| cd01836 | 191 | FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, Fee | 82.44 |
| >PLN02629 powdery mildew resistance 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-106 Score=823.95 Aligned_cols=324 Identities=31% Similarity=0.603 Sum_probs=271.7
Q ss_pred CCCCCCCcccceeeCCCCCCcCCCCCC-CccCCcccccCCCCCccccceeecCCCCCCCCCChHHHHHHHhCCceEEEec
Q 013284 79 GSEKCDIFSGEWVPNPEGPYYTNTTCW-AIHEHQNCMKYGRPDTDFMKWRWKPDGCELPIFNPSQFLEIVRGKSMAFVGD 157 (446)
Q Consensus 79 ~~~~CD~~~G~WV~d~~~PlY~~~~Cp-~i~~~~~C~~nGRpD~~yl~WrWqP~gC~LprFd~~~fl~~LrgK~i~FVGD 157 (446)
..++||+|+|+||+|+++|+|++++|| ||+++|||++|||||++|++|||||++|+||||||.+||++||||+||||||
T Consensus 49 ~~~~CD~f~G~WV~D~s~PlY~~~~Cp~fi~~~~nC~knGRPD~~Yl~WRWqP~gC~LPRFda~~fLe~~RgKrl~FVGD 128 (387)
T PLN02629 49 NQSTCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGKTVMFVGD 128 (387)
T ss_pred CccccCCCCCeEecCCCCCCCCCCCCccccccccchhhcCCCCcchhhccccCCCCCCCCcCHHHHHHHhcCCeEEEecc
Confidence 367899999999999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHhhcccccCcceeecCCCceeEEEEeecCeEEEEEEccccccccccCCCCCCCcceeeeeccccchhhh
Q 013284 158 SVARNQMQSLICLLSRVEYPVDVSYTPEERFKRWRYTSYNFTLATFWTPHLVKSKEADSDGPTNTGLFNLYLDEFDEEWT 237 (446)
Q Consensus 158 Sl~Rnq~~SL~CLL~~~~~p~~~~~~~~~~~~~~~f~~~n~tv~f~wsPfLv~~~~~~~~~~~~~~~~~l~lD~~~~~W~ 237 (446)
||+|||||||+|||++++.+......++++.++|+|++||+||+|||+||||+.+... +...|+||+++.. +
T Consensus 129 SL~RNQ~eSLvClL~~~~p~~~~~~~~~~~~~~~~F~~yN~TV~~ywspfLV~~~~~~-------~~~~l~LD~id~~-a 200 (387)
T PLN02629 129 SLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYGVSISFYKAPYLVDIDAVQ-------GKRVLKLEEISGN-A 200 (387)
T ss_pred ccchhHHHHHHHHhhccCCCCceeeecCCceEEEEeccCCEEEEEEecceEEeeecCC-------CceeEEecCcchh-h
Confidence 9999999999999998663333444556778999999999999999999999876543 2234677766532 3
Q ss_pred ccCCCccEEEEccccccccceeeeecCeeeeeeccc--CCCcccchHHHHHHHHHHHHHHHHHh-cCCCcceEEEEecCC
Q 013284 238 TQIDDFDFLIISAGHWFFRPMVYYENNKIVGCKYCL--LDNVTDMKMFYGYRSAFRTAFKAIYS-LENYKGITFLRTFAP 314 (446)
Q Consensus 238 ~~~~~~DvlV~ntG~Ww~r~~~~~~~g~~vg~~~~~--~~~~~~~~~~~Ayr~alrt~~~wl~~-~~~~~t~VffRt~SP 314 (446)
..+..+|||||||||||.++ +.++||+++. ...+++|++.+||++||+||++||+. +++.+|+|||||+||
T Consensus 201 ~~w~~~DvlVfntghWw~~~------~~~~~~~~~~~g~~~~~~~~~~~A~r~al~T~~~wv~~~~~~~kt~vffrT~SP 274 (387)
T PLN02629 201 NAWRDADVLIFNTGHWWSHQ------GSLQGWDYIESGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQSISP 274 (387)
T ss_pred hhhccCCEEEEeCccccCCC------CeeEEeeeeccCCccccCccHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEecCc
Confidence 44445999999999999885 3456776663 45678999999999999999999964 567899999999999
Q ss_pred CCCCCCCCCCCC-----CCC-ccccCCCCCcccCCCcHHHHHHHHHHHHHHHHhhhccCcceEEeeccccccCCCCCCCC
Q 013284 315 SHFENGLWNQGG-----NCV-RTRPFKSNETTLEGDNLELYMIQIEEFKAAEKEGQRRGKRFRLLDTTQAMLLRPDGHPS 388 (446)
Q Consensus 315 ~Hf~~g~W~~Gg-----~C~-~t~P~~~~e~~~~~~~~~~~~i~~e~~~~~~~~~~~~~~~v~lLDIT~ls~~R~DgHps 388 (446)
+||+||+||+|| +|. +|+|+.++++ .++...++. ++|++.+ .++.+|++||||.||++|||||||
T Consensus 275 ~Hfe~g~Wn~gg~~~~~~C~~et~P~~~~~~-~~~~~~~~~--~ve~v~~------~~~~~v~lLDIT~ls~lR~DgHPs 345 (387)
T PLN02629 275 THYNPSEWSAGASTTTKNCYGETTPMSGMTY-PGAYPDQMR--VVDEVIR------GMHNPAYLLDITLLSELRKDGHPS 345 (387)
T ss_pred ccccCCCcCCCCCCCCCCCccCCccCcCccc-cCcchHHHH--HHHHHHH------hcCCceEEEechhhhhcCCCCCcc
Confidence 999999999875 587 7999975543 344444443 3344332 256899999999999999999999
Q ss_pred CCCCC----CCCCCCCCCCcccccCCChhhHHHHHHHHHHH
Q 013284 389 RYGHW----PHENVTLYNDCVHWCLPGPIDTWSDFLLEMLK 425 (446)
Q Consensus 389 ~y~~~----~~~~~~~~~DClHWCLPGv~DtWNelL~~~L~ 425 (446)
+|+.. +.+++..++||+||||||||||||||||++|+
T Consensus 346 ~Y~~~~~~~~~~~p~~~~DC~HWCLPGvpDTWNelL~a~L~ 386 (387)
T PLN02629 346 IYSGDLSPSQRANPDRSADCSHWCLPGLPDTWNQLFYTALF 386 (387)
T ss_pred cccCCCchhhccCCCCCCCcccccCCCCCccHHHHHHHHHh
Confidence 99754 22344567999999999999999999999996
|
|
| >PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
| >PF14416 PMR5N: PMR5 N terminal Domain | Back alignment and domain information |
|---|
| >cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
| >cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
| >cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases | Back alignment and domain information |
|---|
| >cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 446 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-04 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 43.7 bits (102), Expect = 1e-04
Identities = 61/426 (14%), Positives = 114/426 (26%), Gaps = 138/426 (32%)
Query: 71 QGSIKEVEGSEKCDIFSGEWVPNPEGPYYTNTTCWAIHEHQNCMKYG------RPDTDFM 124
Q K + E+ D + W + Q M R + F+
Sbjct: 39 QDMPKSILSKEEIDHIIMS--KDAVSGTLR--LFWTLLSKQEEMVQKFVEEVLRINYKFL 94
Query: 125 --KWRWKPDGCELPIFNPSQFLEIVRGKSMAFVGDSVAR----NQMQSLICLLSRVEYPV 178
+ + + + + + + F +V+R +++ + L + +
Sbjct: 95 MSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVL 154
Query: 179 --------------DV--SYTPEERFKRWRYTSYNFTLATFWTPHLVKSKEADSDGPTNT 222
DV SY + + +F + FW + K +S
Sbjct: 155 IDGVLGSGKTWVALDVCLSYKVQCKM--------DFKI--FW----LNLKNCNSPETVLE 200
Query: 223 GLFNLYLDEFDEEWTTQIDDFDFLIISAGHW------FFRPMVYYENNKIVGCKYCL--L 274
L L D WT++ D + + + Y + CL L
Sbjct: 201 MLQKLLYQ-IDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPY---------ENCLLVL 250
Query: 275 DNVTDMKMFYGYRSAFR--------TAFKAIY---SLENYKGIT---FLRTFAPSHFENG 320
NV + K + +AF T FK + S I+ T P ++
Sbjct: 251 LNVQNAKAW----NAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSL 306
Query: 321 LWNQGGNCVRTRPFKSNETTLEGDNLELYMIQIEEFKAAEKEGQRRGKRFRLLDTTQAML 380
L + RP L + L +I A
Sbjct: 307 L----LKYLDCRPQDLPREVLTTNPRRLSII--------------------------AES 336
Query: 381 LRPDGHPSRYGHWPHENVTLYNDCVHWCLPGPIDTWSDFLLEMLKMEGIRSYEDKLYPSD 440
+R + + +W H N D L +++ S L P++
Sbjct: 337 IRD--GLATWDNWKHVN-------------------CDKLTTIIES----SLN-VLEPAE 370
Query: 441 RKMRFR 446
+ F
Sbjct: 371 YRKMFD 376
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 446 | |||
| 4h08_A | 200 | Putative hydrolase; GDSL-like lipase/acylhydrolase | 95.72 | |
| 3p94_A | 204 | GDSL-like lipase; serine hydrolase, catalytic tria | 92.94 |
| >4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=95.72 E-value=0.0078 Score=54.09 Aligned_cols=51 Identities=20% Similarity=0.196 Sum_probs=36.0
Q ss_pred CccEEEEccccccccceeeeecCeeeeeecccCCCcccchHHHHHHHHHHHHHHHHHhcCCCcceEEEEecCCCCC
Q 013284 242 DFDFLIISAGHWFFRPMVYYENNKIVGCKYCLLDNVTDMKMFYGYRSAFRTAFKAIYSLENYKGITFLRTFAPSHF 317 (446)
Q Consensus 242 ~~DvlV~ntG~Ww~r~~~~~~~g~~vg~~~~~~~~~~~~~~~~Ayr~alrt~~~wl~~~~~~~t~VffRt~SP~Hf 317 (446)
.+|+|||+.|..=.. ...+.|+..++++++.++.. .++++|+|-+..|...
T Consensus 74 ~pd~Vvi~~G~ND~~------------------------~~~~~~~~~l~~ii~~l~~~-~p~~~ii~~~~~P~~~ 124 (200)
T 4h08_A 74 KFDVIHFNNGLHGFD------------------------YTEEEYDKSFPKLIKIIRKY-APKAKLIWANTTPVRT 124 (200)
T ss_dssp CCSEEEECCCSSCTT------------------------SCHHHHHHHHHHHHHHHHHH-CTTCEEEEECCCCCEE
T ss_pred CCCeEEEEeeeCCCC------------------------CCHHHHHHHHHHHHHHHhhh-CCCccEEEeccCCCcc
Confidence 489999999854100 12467888888888877653 3567889988888654
|
| >3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 446 | |||
| d3dc7a1 | 207 | Uncharacterized protein Lp3323 {Lactobacillus plan | 96.09 | |
| d2o14a2 | 208 | Hypothetical protein YxiM {Bacillus subtilis [TaxI | 95.78 |
| >d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: SGNH hydrolase family: BT2961-like domain: Uncharacterized protein Lp3323 species: Lactobacillus plantarum [TaxId: 1590]
Probab=96.09 E-value=0.011 Score=50.38 Aligned_cols=13 Identities=38% Similarity=0.519 Sum_probs=11.7
Q ss_pred hCCceEEEechhh
Q 013284 148 RGKSMAFVGDSVA 160 (446)
Q Consensus 148 rgK~i~FVGDSl~ 160 (446)
..|||+|+|||++
T Consensus 3 ~~kri~~iGDSit 15 (207)
T d3dc7a1 3 SFKRPAWLGDSIT 15 (207)
T ss_dssp CCSSEEEEESTTT
T ss_pred CCCEEEEEehHhh
Confidence 4689999999998
|
| >d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|