Citrus Sinensis ID: 013345
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 445 | 2.2.26 [Sep-21-2011] | |||||||
| Q01781 | 485 | Adenosylhomocysteinase OS | N/A | no | 1.0 | 0.917 | 0.824 | 0.0 | |
| P35007 | 485 | Adenosylhomocysteinase OS | N/A | no | 1.0 | 0.917 | 0.847 | 0.0 | |
| O23255 | 485 | Adenosylhomocysteinase 1 | yes | no | 1.0 | 0.917 | 0.832 | 0.0 | |
| Q9SP37 | 485 | Adenosylhomocysteinase OS | N/A | no | 1.0 | 0.917 | 0.835 | 0.0 | |
| P68173 | 485 | Adenosylhomocysteinase OS | N/A | no | 1.0 | 0.917 | 0.841 | 0.0 | |
| P68172 | 485 | Adenosylhomocysteinase OS | N/A | no | 1.0 | 0.917 | 0.841 | 0.0 | |
| Q9LK36 | 485 | Adenosylhomocysteinase 2 | yes | no | 1.0 | 0.917 | 0.828 | 0.0 | |
| P50246 | 485 | Adenosylhomocysteinase OS | N/A | no | 1.0 | 0.917 | 0.830 | 0.0 | |
| P93253 | 485 | Adenosylhomocysteinase OS | N/A | no | 1.0 | 0.917 | 0.826 | 0.0 | |
| P50249 | 485 | Adenosylhomocysteinase OS | N/A | no | 1.0 | 0.917 | 0.826 | 0.0 |
| >sp|Q01781|SAHH_PETCR Adenosylhomocysteinase OS=Petroselinum crispum GN=SAHH PE=2 SV=2 | Back alignment and function desciption |
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Score = 832 bits (2149), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/485 (82%), Positives = 426/485 (87%), Gaps = 40/485 (8%)
Query: 1 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGS 60
MALSVEK+A+GRE+KVKD+S ADFGRLE+ELAEVEMPGLM+CR EFGPSQPFKGA+ITGS
Sbjct: 1 MALSVEKTAAGREYKVKDMSLADFGRLELELAEVEMPGLMSCRTEFGPSQPFKGARITGS 60
Query: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWC 120
LHMTIQT VLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDS +VFAWKGETLQEYWWC
Sbjct: 61 LHMTIQTGVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSCAVFAWKGETLQEYWWC 120
Query: 121 TEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTI 180
TE+ALDWGP GGPDLIVDDGGDATLLIHEGVKAEE Y+K+G +PDPASTDNAEFQIVL+I
Sbjct: 121 TERALDWGPDGGPDLIVDDGGDATLLIHEGVKAEEEYKKSGAIPDPASTDNAEFQIVLSI 180
Query: 181 IRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDN 240
IRDGLK+DP KYHKMK+RLVGVSEETTTGVKRLYQMQ+NGTLLFPAINVNDSVTKSKFDN
Sbjct: 181 IRDGLKSDPMKYHKMKDRLVGVSEETTTGVKRLYQMQQNGTLLFPAINVNDSVTKSKFDN 240
Query: 241 LYGCRHSLPDGLMRATDVMI---------------------------------------- 260
LYGCRHSLPDGLMRATDVMI
Sbjct: 241 LYGCRHSLPDGLMRATDVMIAGKVALIAGYGDVGKGCAAAMKQAGARVIVTEIDPICALQ 300
Query: 261 ALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL 320
A MEGLQVL LEDV+S+ DIFVTTTGNKDIIMV M+KMKNNAIVCNIGHFDNEIDMLGL
Sbjct: 301 ATMEGLQVLPLEDVVSEVDIFVTTTGNKDIIMVSDMRKMKNNAIVCNIGHFDNEIDMLGL 360
Query: 321 ETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 380
ETYPGVKRITIKPQTDRWVFP+T GII+LAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ
Sbjct: 361 ETYPGVKRITIKPQTDRWVFPDTGRGIIILAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
Query: 381 LELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKP 440
LELW EKS+GKYEKKVYVLPKHLDEKVAALHLGKLGAKLT+L+K+QADYISV +GPYKP
Sbjct: 421 LELWNEKSSGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYISVPVEGPYKP 480
Query: 441 LHYRY 445
HYRY
Sbjct: 481 AHYRY 485
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Adenosylhomocysteine is a competitive inhibitor of S-adenosyl-L-methionine-dependent methyl transferase reactions; therefore adenosylhomocysteinase may play a key role in the control of methylations via regulation of the intracellular concentration of adenosylhomocysteine. Petroselinum crispum (taxid: 4043) EC: 3EC: .EC: 3EC: .EC: 1EC: .EC: 1 |
| >sp|P35007|SAHH_CATRO Adenosylhomocysteinase OS=Catharanthus roseus GN=SAHH PE=2 SV=1 | Back alignment and function description |
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| >sp|O23255|SAHH1_ARATH Adenosylhomocysteinase 1 OS=Arabidopsis thaliana GN=SAHH1 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9SP37|SAHH_LUPLU Adenosylhomocysteinase OS=Lupinus luteus GN=SAHH PE=1 SV=1 | Back alignment and function description |
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| >sp|P68173|SAHH_TOBAC Adenosylhomocysteinase OS=Nicotiana tabacum GN=SAHH PE=2 SV=1 | Back alignment and function description |
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| >sp|P68172|SAHH_NICSY Adenosylhomocysteinase OS=Nicotiana sylvestris GN=SAHH PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9LK36|SAHH2_ARATH Adenosylhomocysteinase 2 OS=Arabidopsis thaliana GN=SAHH2 PE=1 SV=1 | Back alignment and function description |
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| >sp|P50246|SAHH_MEDSA Adenosylhomocysteinase OS=Medicago sativa GN=SAHH PE=2 SV=1 | Back alignment and function description |
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| >sp|P93253|SAHH_MESCR Adenosylhomocysteinase OS=Mesembryanthemum crystallinum GN=SAHH PE=2 SV=1 | Back alignment and function description |
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| >sp|P50249|SAHH_PHASS Adenosylhomocysteinase OS=Phalaenopsis sp. GN=SAHH PE=2 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 445 | ||||||
| 356525205 | 485 | PREDICTED: adenosylhomocysteinase-like [ | 1.0 | 0.917 | 0.859 | 0.0 | |
| 356512439 | 485 | PREDICTED: adenosylhomocysteinase-like [ | 1.0 | 0.917 | 0.859 | 0.0 | |
| 255563606 | 485 | adenosylhomocysteinase, putative [Ricinu | 1.0 | 0.917 | 0.853 | 0.0 | |
| 449442393 | 485 | PREDICTED: adenosylhomocysteinase-like [ | 1.0 | 0.917 | 0.849 | 0.0 | |
| 336390551 | 485 | adenosylhomocysteinase [Glycine max] | 1.0 | 0.917 | 0.855 | 0.0 | |
| 211905341 | 485 | S-adenosyl-L-homocystein hydrolase [Goss | 1.0 | 0.917 | 0.855 | 0.0 | |
| 417744 | 485 | RecName: Full=Adenosylhomocysteinase; Sh | 1.0 | 0.917 | 0.824 | 0.0 | |
| 29367605 | 485 | wheat adenosylhomocysteinase-like protei | 1.0 | 0.917 | 0.849 | 0.0 | |
| 429326634 | 485 | S-adenosyl-L-homocysteine hydrolase [Pop | 1.0 | 0.917 | 0.847 | 0.0 | |
| 297804932 | 485 | hypothetical protein ARALYDRAFT_915516 [ | 1.0 | 0.917 | 0.841 | 0.0 |
| >gi|356525205|ref|XP_003531217.1| PREDICTED: adenosylhomocysteinase-like [Glycine max] | Back alignment and taxonomy information |
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Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/485 (85%), Positives = 432/485 (89%), Gaps = 40/485 (8%)
Query: 1 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGS 60
MAL VEK+ SGRE+KVKDLSQADFGRLEIELAEVEMPGLMACR EFGPSQPFKGA+ITGS
Sbjct: 1 MALLVEKTTSGREYKVKDLSQADFGRLEIELAEVEMPGLMACRTEFGPSQPFKGARITGS 60
Query: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWC 120
LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSA+VFAWKGETLQEYWWC
Sbjct: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWC 120
Query: 121 TEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTI 180
TE+ALDWGPGGGPDLIVDDGGDATLLIHEGVKAEE+YEKTG+LPDP STDNAEFQIVLTI
Sbjct: 121 TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEELYEKTGELPDPNSTDNAEFQIVLTI 180
Query: 181 IRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDN 240
IRDGLK DP +Y KMKERLVGVSEETTTGVKRLYQMQ NGTLLFPAINVNDSVTKSKFDN
Sbjct: 181 IRDGLKTDPTRYRKMKERLVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDN 240
Query: 241 LYGCRHSLPDGLMRATDVMI---------------------------------------- 260
LYGCRHSLPDGLMRATDVMI
Sbjct: 241 LYGCRHSLPDGLMRATDVMIAGKVAVVAGYGDVGKGCAAAMKQAGARVIVTEIDPICALQ 300
Query: 261 ALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL 320
ALMEGLQVLTLEDV+S+ADIFVTTTGNKDIIMVDHM+KMKNNAIVCNIGHFDNEIDMLGL
Sbjct: 301 ALMEGLQVLTLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGL 360
Query: 321 ETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 380
E YPGVKRITIKPQTDRWVFPETN+GIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ
Sbjct: 361 ENYPGVKRITIKPQTDRWVFPETNTGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
Query: 381 LELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKP 440
LELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLT+L+K QADYISV +GPYKP
Sbjct: 421 LELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTQLSKSQADYISVPVEGPYKP 480
Query: 441 LHYRY 445
HYRY
Sbjct: 481 AHYRY 485
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Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356512439|ref|XP_003524926.1| PREDICTED: adenosylhomocysteinase-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|255563606|ref|XP_002522805.1| adenosylhomocysteinase, putative [Ricinus communis] gi|223538043|gb|EEF39656.1| adenosylhomocysteinase, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|449442393|ref|XP_004138966.1| PREDICTED: adenosylhomocysteinase-like [Cucumis sativus] gi|449505280|ref|XP_004162424.1| PREDICTED: adenosylhomocysteinase-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|336390551|gb|AEI54335.1| adenosylhomocysteinase [Glycine max] | Back alignment and taxonomy information |
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| >gi|211905341|gb|ACJ11250.1| S-adenosyl-L-homocystein hydrolase [Gossypium hirsutum] | Back alignment and taxonomy information |
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| >gi|417744|sp|Q01781.2|SAHH_PETCR RecName: Full=Adenosylhomocysteinase; Short=AdoHcyase; AltName: Full=S-adenosyl-L-homocysteine hydrolase gi|169663|gb|AAA33856.1| S-adenosylhomocysteine hydrolase [Petroselinum crispum] | Back alignment and taxonomy information |
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| >gi|29367605|gb|AAO72664.1| wheat adenosylhomocysteinase-like protein [Oryza sativa Japonica Group] gi|125534270|gb|EAY80818.1| hypothetical protein OsI_35998 [Oryza sativa Indica Group] gi|222615923|gb|EEE52055.1| hypothetical protein OsJ_33804 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
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| >gi|429326634|gb|AFZ78657.1| S-adenosyl-L-homocysteine hydrolase [Populus tomentosa] | Back alignment and taxonomy information |
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| >gi|297804932|ref|XP_002870350.1| hypothetical protein ARALYDRAFT_915516 [Arabidopsis lyrata subsp. lyrata] gi|297316186|gb|EFH46609.1| hypothetical protein ARALYDRAFT_915516 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 445 | ||||||
| TAIR|locus:2129256 | 485 | HOG1 "HOMOLOGY-DEPENDENT GENE | 0.586 | 0.538 | 0.869 | 3.2e-210 | |
| TAIR|locus:2095193 | 485 | SAHH2 "S-adenosyl-l-homocystei | 0.586 | 0.538 | 0.850 | 8.6e-208 | |
| UNIPROTKB|P60176 | 495 | ahcY "Adenosylhomocysteinase" | 0.568 | 0.511 | 0.548 | 3e-129 | |
| TIGR_CMR|GSU_1875 | 475 | GSU_1875 "adenosylhomocysteina | 0.573 | 0.536 | 0.532 | 8.5e-119 | |
| TIGR_CMR|SPO_3861 | 462 | SPO_3861 "adenosylhomocysteina | 0.541 | 0.521 | 0.542 | 1.8e-116 | |
| WB|WBGene00019322 | 437 | ahcy-1 [Caenorhabditis elegans | 0.948 | 0.965 | 0.465 | 6.5e-90 | |
| UNIPROTKB|F1MWH2 | 530 | AHCYL1 "Adenosylhomocysteinase | 0.406 | 0.341 | 0.394 | 2.6e-89 | |
| UNIPROTKB|E2REN0 | 517 | AHCYL1 "Adenosylhomocysteinase | 0.406 | 0.350 | 0.394 | 2.6e-89 | |
| UNIPROTKB|O43865 | 530 | AHCYL1 "Putative adenosylhomoc | 0.406 | 0.341 | 0.394 | 2.6e-89 | |
| UNIPROTKB|F1S610 | 494 | AHCYL1 "Adenosylhomocysteinase | 0.406 | 0.366 | 0.394 | 2.6e-89 |
| TAIR|locus:2129256 HOG1 "HOMOLOGY-DEPENDENT GENE SILENCING 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1223 (435.6 bits), Expect = 3.2e-210, Sum P(2) = 3.2e-210
Identities = 227/261 (86%), Positives = 242/261 (92%)
Query: 1 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGS 60
MAL VEK++SGRE+KVKD+SQADFGRLE+ELAEVEMPGLMACR EFGPSQPFKGA+ITGS
Sbjct: 1 MALLVEKTSSGREYKVKDMSQADFGRLELELAEVEMPGLMACRTEFGPSQPFKGARITGS 60
Query: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWC 120
LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH WKGETLQEYWWC
Sbjct: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWC 120
Query: 121 TEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTI 180
TE+ALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEI+EKTG++PDP STDN EFQIVL+I
Sbjct: 121 TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIFEKTGQVPDPTSTDNPEFQIVLSI 180
Query: 181 IRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDN 240
I++GL+ DPKKYHKMKERLVGVSEETTTGVKRLYQMQ+NGTLLFPAINVNDSVTKSKFDN
Sbjct: 181 IKEGLQVDPKKYHKMKERLVGVSEETTTGVKRLYQMQQNGTLLFPAINVNDSVTKSKFDN 240
Query: 241 LYGCRHSLPDGLMRATDVMIA 261
LYGCRHSLPDGLMRATDVMIA
Sbjct: 241 LYGCRHSLPDGLMRATDVMIA 261
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| TAIR|locus:2095193 SAHH2 "S-adenosyl-l-homocysteine (SAH) hydrolase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P60176 ahcY "Adenosylhomocysteinase" [Mycobacterium tuberculosis (taxid:1773)] | Back alignment and assigned GO terms |
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| TIGR_CMR|GSU_1875 GSU_1875 "adenosylhomocysteinase" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
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| TIGR_CMR|SPO_3861 SPO_3861 "adenosylhomocysteinase" [Ruegeria pomeroyi DSS-3 (taxid:246200)] | Back alignment and assigned GO terms |
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| WB|WBGene00019322 ahcy-1 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1MWH2 AHCYL1 "Adenosylhomocysteinase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E2REN0 AHCYL1 "Adenosylhomocysteinase" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|O43865 AHCYL1 "Putative adenosylhomocysteinase 2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1S610 AHCYL1 "Adenosylhomocysteinase" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q89HP6 | SAHH_BRAJA | 3, ., 3, ., 1, ., 1 | 0.5738 | 0.9528 | 0.8964 | yes | no |
| B2HEP6 | SAHH_MYCMM | 3, ., 3, ., 1, ., 1 | 0.5471 | 0.9685 | 0.8760 | yes | no |
| P35007 | SAHH_CATRO | 3, ., 3, ., 1, ., 1 | 0.8474 | 1.0 | 0.9175 | N/A | no |
| C6C1F4 | SAHH_DESAD | 3, ., 3, ., 1, ., 1 | 0.5833 | 0.9640 | 0.9088 | yes | no |
| B4SD43 | SAHH_PELPB | 3, ., 3, ., 1, ., 1 | 0.5729 | 0.9505 | 0.8980 | yes | no |
| Q1BCD6 | SAHH_MYCSS | 3, ., 3, ., 1, ., 1 | 0.5487 | 0.9730 | 0.8854 | yes | no |
| A1VFZ7 | SAHH_DESVV | 3, ., 3, ., 1, ., 1 | 0.5564 | 0.9438 | 0.8768 | yes | no |
| B8DR41 | SAHH_DESVM | 3, ., 3, ., 1, ., 1 | 0.5699 | 0.9483 | 0.8810 | yes | no |
| A4ZHR8 | SAHH_MYCS2 | 3, ., 3, ., 1, ., 1 | 0.5546 | 0.9595 | 0.8804 | yes | no |
| Q8KEG8 | SAHH_CHLTE | 3, ., 3, ., 1, ., 1 | 0.5765 | 0.9415 | 0.8895 | yes | no |
| A3PW97 | SAHH_MYCSJ | 3, ., 3, ., 1, ., 1 | 0.5508 | 0.9730 | 0.8854 | yes | no |
| A4SF77 | SAHH_PROVI | 3, ., 3, ., 1, ., 1 | 0.5550 | 0.9550 | 0.9023 | yes | no |
| O23255 | SAHH1_ARATH | 3, ., 3, ., 1, ., 1 | 0.8329 | 1.0 | 0.9175 | yes | no |
| P60176 | SAHH_MYCTU | 3, ., 3, ., 1, ., 1 | 0.5493 | 0.9640 | 0.8666 | yes | no |
| P32112 | SAHH_WHEAT | 3, ., 3, ., 1, ., 1 | 0.8185 | 1.0 | 0.9175 | N/A | no |
| B3QMF5 | SAHH_CHLP8 | 3, ., 3, ., 1, ., 1 | 0.5828 | 0.9415 | 0.8895 | yes | no |
| Q7TWW7 | SAHH_MYCBO | 3, ., 3, ., 1, ., 1 | 0.5514 | 0.9640 | 0.8666 | yes | no |
| P93253 | SAHH_MESCR | 3, ., 3, ., 1, ., 1 | 0.8268 | 1.0 | 0.9175 | N/A | no |
| C1AH22 | SAHH_MYCBT | 3, ., 3, ., 1, ., 1 | 0.5493 | 0.9640 | 0.8666 | yes | no |
| A1UCK8 | SAHH_MYCSK | 3, ., 3, ., 1, ., 1 | 0.5487 | 0.9730 | 0.8854 | yes | no |
| A1KNQ0 | SAHH_MYCBP | 3, ., 3, ., 1, ., 1 | 0.5493 | 0.9640 | 0.8666 | yes | no |
| P50249 | SAHH_PHASS | 3, ., 3, ., 1, ., 1 | 0.8268 | 1.0 | 0.9175 | N/A | no |
| P68172 | SAHH_NICSY | 3, ., 3, ., 1, ., 1 | 0.8412 | 1.0 | 0.9175 | N/A | no |
| P50246 | SAHH_MEDSA | 3, ., 3, ., 1, ., 1 | 0.8309 | 1.0 | 0.9175 | N/A | no |
| Q30WL8 | SAHH_DESDG | 3, ., 3, ., 1, ., 1 | 0.5941 | 0.9438 | 0.8768 | yes | no |
| P68173 | SAHH_TOBAC | 3, ., 3, ., 1, ., 1 | 0.8412 | 1.0 | 0.9175 | N/A | no |
| Q8GGL7 | SAHH_STRAZ | 3, ., 3, ., 1, ., 1 | 0.5864 | 0.9393 | 0.8912 | N/A | no |
| Q3B532 | SAHH_PELLD | 3, ., 3, ., 1, ., 1 | 0.5530 | 0.9505 | 0.8980 | yes | no |
| Q9CCJ4 | SAHH_MYCLE | 3, ., 3, ., 1, ., 1 | 0.5493 | 0.9640 | 0.8719 | yes | no |
| Q9KZM1 | SAHH_STRCO | 3, ., 3, ., 1, ., 1 | 0.5711 | 0.9595 | 0.8804 | yes | no |
| Q64MT2 | SAHH_BACFR | 3, ., 3, ., 1, ., 1 | 0.5966 | 0.9393 | 0.8583 | yes | no |
| Q8A407 | SAHH_BACTN | 3, ., 3, ., 1, ., 1 | 0.5966 | 0.9393 | 0.8781 | yes | no |
| Q7RKK8 | SAHH_PLAYO | 3, ., 3, ., 1, ., 1 | 0.5443 | 0.9662 | 0.8977 | N/A | no |
| Q01781 | SAHH_PETCR | 3, ., 3, ., 1, ., 1 | 0.8247 | 1.0 | 0.9175 | N/A | no |
| A0PRF5 | SAHH_MYCUA | 3, ., 3, ., 1, ., 1 | 0.5491 | 0.9685 | 0.8760 | yes | no |
| A5U7S2 | SAHH_MYCTA | 3, ., 3, ., 1, ., 1 | 0.5493 | 0.9640 | 0.8666 | yes | no |
| B3EDY3 | SAHH_CHLL2 | 3, ., 3, ., 1, ., 1 | 0.5765 | 0.9595 | 0.9065 | yes | no |
| Q82DC9 | SAHH_STRAW | 3, ., 3, ., 1, ., 1 | 0.5649 | 0.9595 | 0.8804 | yes | no |
| B1VUW6 | SAHH_STRGG | 3, ., 3, ., 1, ., 1 | 0.5773 | 0.9595 | 0.8804 | yes | no |
| Q3AQC2 | SAHH_CHLCH | 3, ., 3, ., 1, ., 1 | 0.5786 | 0.9595 | 0.9065 | yes | no |
| P51540 | SAHH_TRIVA | 3, ., 3, ., 1, ., 1 | 0.5448 | 0.9707 | 0.8888 | N/A | no |
| Q9SWF5 | SAHH_SOLLC | 3, ., 3, ., 1, ., 1 | 0.8082 | 1.0 | 0.9175 | N/A | no |
| Q9SP37 | SAHH_LUPLU | 3, ., 3, ., 1, ., 1 | 0.8350 | 1.0 | 0.9175 | N/A | no |
| Q4XZZ5 | SAHH_PLACH | 3, ., 3, ., 1, ., 1 | 0.5443 | 0.9662 | 0.8977 | N/A | no |
| Q936D6 | SAHH_STRAA | 3, ., 3, ., 1, ., 1 | 0.5676 | 0.9685 | 0.8941 | N/A | no |
| Q73UK6 | SAHH_MYCPA | 3, ., 3, ., 1, ., 1 | 0.5510 | 0.9640 | 0.8649 | N/A | no |
| Q5YQS7 | SAHH_NOCFA | 3, ., 3, ., 1, ., 1 | 0.5525 | 0.9617 | 0.8663 | yes | no |
| Q9LK36 | SAHH2_ARATH | 3, ., 3, ., 1, ., 1 | 0.8288 | 1.0 | 0.9175 | yes | no |
| B8ZQE9 | SAHH_MYCLB | 3, ., 3, ., 1, ., 1 | 0.5493 | 0.9640 | 0.8719 | yes | no |
| P50250 | SAHH_PLAF7 | 3, ., 3, ., 1, ., 1 | 0.5358 | 0.9662 | 0.8977 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.3.1 | 0.998 |
| 3rd Layer | 3.3.1.1 | 0.994 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
 |
 |
 |
 |
 |
 |
 |
 |
 |
|||
 | scaffold_703258.1 | annotation not avaliable (485 aa) | |||||||||
(Arabidopsis lyrata) | |||||||||||
 | fgenesh2_kg.3__1916__AT3G17390.1 | • | • | • | 0.818 | ||||||
 | fgenesh2_kg.2__1519__AT1G72550.2 | • | • | 0.817 | |||||||
 | scaffold_402310.1 | • | • | • | 0.815 | ||||||
 | scaffold_604104.1 | • | • | • | 0.808 | ||||||
 | fgenesh2_kg.1__164__AT1G02500.1 | • | • | • | 0.792 | ||||||
 | fgenesh2_kg.3__1104__AT3G10690.1 | • | 0.704 | ||||||||
 | fgenesh2_kg.3__2898__AT2G05830.1 | • | 0.695 | ||||||||
 | fgenesh1_pm.C_scaffold_1000908 | • | • | • | 0.662 | ||||||
 | scaffold_503640.1 | • | 0.617 | ||||||||
 | scaffold_602203.1 | • | • | 0.613 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 445 | |||
| PLN02494 | 477 | PLN02494, PLN02494, adenosylhomocysteinase | 0.0 | |
| PTZ00075 | 476 | PTZ00075, PTZ00075, Adenosylhomocysteinase; Provis | 0.0 | |
| smart00996 | 426 | smart00996, AdoHcyase, S-adenosyl-L-homocysteine h | 0.0 | |
| pfam05221 | 430 | pfam05221, AdoHcyase, S-adenosyl-L-homocysteine hy | 0.0 | |
| PRK05476 | 425 | PRK05476, PRK05476, S-adenosyl-L-homocysteine hydr | 0.0 | |
| cd00401 | 402 | cd00401, SAHH, S-Adenosylhomocysteine Hydrolase, N | 0.0 | |
| COG0499 | 420 | COG0499, SAM1, S-adenosylhomocysteine hydrolase [C | 0.0 | |
| TIGR00936 | 407 | TIGR00936, ahcY, adenosylhomocysteinase | 1e-174 | |
| pfam00670 | 162 | pfam00670, AdoHcyase_NAD, S-adenosyl-L-homocystein | 6e-68 | |
| smart00997 | 162 | smart00997, AdoHcyase_NAD, S-adenosyl-L-homocystei | 2e-57 | |
| cd12154 | 310 | cd12154, FDH_GDH_like, Formate/glycerate dehydroge | 1e-22 |
| >gnl|CDD|178111 PLN02494, PLN02494, adenosylhomocysteinase | Back alignment and domain information |
|---|
Score = 938 bits (2425), Expect = 0.0
Identities = 404/477 (84%), Positives = 424/477 (88%), Gaps = 40/477 (8%)
Query: 9 ASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTA 68
+SGRE+KVKD+SQADFGRLEIELAEVEMPGLMACR EFGPSQPFKGA+ITGSLHMTIQTA
Sbjct: 1 SSGREYKVKDMSQADFGRLEIELAEVEMPGLMACRTEFGPSQPFKGARITGSLHMTIQTA 60
Query: 69 VLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWCTEKALDWG 128
VLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSA+VFAWKGETLQEYWWCTE+ALDWG
Sbjct: 61 VLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWCTERALDWG 120
Query: 129 PGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKAD 188
PGGGPDLIVDDGGDATLLIHEGVKAEE +EK G LPDP STDNAEF+IVLTII+DGLK D
Sbjct: 121 PGGGPDLIVDDGGDATLLIHEGVKAEEEFEKDGTLPDPTSTDNAEFKIVLTIIKDGLKVD 180
Query: 189 PKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSL 248
PKKYHKMKERLVGVSEETTTGVKRLYQMQ+NGTLLFPAINVNDSVTKSKFDNLYGCRHSL
Sbjct: 181 PKKYHKMKERLVGVSEETTTGVKRLYQMQKNGTLLFPAINVNDSVTKSKFDNLYGCRHSL 240
Query: 249 PDGLMRATDVMI----------------------------------------ALMEGLQV 268
PDGLMRATDVMI ALMEG QV
Sbjct: 241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGARVIVTEIDPICALQALMEGYQV 300
Query: 269 LTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKR 328
LTLEDV+S+ADIFVTTTGNKDIIMVDHM+KMKNNAIVCNIGHFDNEIDMLGLETYPGVKR
Sbjct: 301 LTLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKR 360
Query: 329 ITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKS 388
ITIKPQTDRWVFP+T SGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW EK
Sbjct: 361 ITIKPQTDRWVFPDTGSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKK 420
Query: 389 TGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKPLHYRY 445
+GKYEKKVYVLPKHLDEKVAALHLGKLGAKLT+L+K+QADYI+V +GPYKP HYRY
Sbjct: 421 SGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYINVPVEGPYKPAHYRY 477
|
Length = 477 |
| >gnl|CDD|240258 PTZ00075, PTZ00075, Adenosylhomocysteinase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|214963 smart00996, AdoHcyase, S-adenosyl-L-homocysteine hydrolase | Back alignment and domain information |
|---|
| >gnl|CDD|218507 pfam05221, AdoHcyase, S-adenosyl-L-homocysteine hydrolase | Back alignment and domain information |
|---|
| >gnl|CDD|235488 PRK05476, PRK05476, S-adenosyl-L-homocysteine hydrolase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|240619 cd00401, SAHH, S-Adenosylhomocysteine Hydrolase, NAD-binding and catalytic domains | Back alignment and domain information |
|---|
| >gnl|CDD|223573 COG0499, SAM1, S-adenosylhomocysteine hydrolase [Coenzyme metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|213572 TIGR00936, ahcY, adenosylhomocysteinase | Back alignment and domain information |
|---|
| >gnl|CDD|109716 pfam00670, AdoHcyase_NAD, S-adenosyl-L-homocysteine hydrolase, NAD binding domain | Back alignment and domain information |
|---|
| >gnl|CDD|198065 smart00997, AdoHcyase_NAD, S-adenosyl-L-homocysteine hydrolase, NAD binding domain | Back alignment and domain information |
|---|
| >gnl|CDD|240631 cd12154, FDH_GDH_like, Formate/glycerate dehydrogenases, D-specific 2-hydroxy acid dehydrogenases and related dehydrogenases | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 445 | |||
| COG0499 | 420 | SAM1 S-adenosylhomocysteine hydrolase [Coenzyme me | 100.0 | |
| KOG1370 | 434 | consensus S-adenosylhomocysteine hydrolase [Coenzy | 100.0 | |
| PLN02494 | 477 | adenosylhomocysteinase | 100.0 | |
| PTZ00075 | 476 | Adenosylhomocysteinase; Provisional | 100.0 | |
| PRK05476 | 425 | S-adenosyl-L-homocysteine hydrolase; Provisional | 100.0 | |
| TIGR00936 | 406 | ahcY adenosylhomocysteinase. This enzyme hydrolyze | 100.0 | |
| cd00401 | 413 | AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado | 100.0 | |
| PF05221 | 268 | AdoHcyase: S-adenosyl-L-homocysteine hydrolase; In | 100.0 | |
| PF00670 | 162 | AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase | 100.0 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 95.69 | |
| PRK08410 | 311 | 2-hydroxyacid dehydrogenase; Provisional | 95.08 | |
| cd05212 | 140 | NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom | 94.75 | |
| PLN02928 | 347 | oxidoreductase family protein | 94.72 | |
| PRK06932 | 314 | glycerate dehydrogenase; Provisional | 93.8 | |
| PRK14190 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 93.78 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 93.49 | |
| COG0111 | 324 | SerA Phosphoglycerate dehydrogenase and related de | 93.46 | |
| PRK06487 | 317 | glycerate dehydrogenase; Provisional | 92.98 | |
| PF02882 | 160 | THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl | 92.74 | |
| PRK15409 | 323 | bifunctional glyoxylate/hydroxypyruvate reductase | 92.66 | |
| PRK14189 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 92.52 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 92.39 | |
| PRK13243 | 333 | glyoxylate reductase; Reviewed | 92.08 | |
| PRK14191 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 92.05 | |
| PLN02306 | 386 | hydroxypyruvate reductase | 91.98 | |
| PRK15438 | 378 | erythronate-4-phosphate dehydrogenase PdxB; Provis | 91.8 | |
| PRK14170 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 91.44 | |
| PRK14173 | 287 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 91.36 | |
| PRK14184 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 91.26 | |
| cd01079 | 197 | NAD_bind_m-THF_DH NAD binding domain of methylene- | 91.07 | |
| PRK14174 | 295 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 90.75 | |
| PRK13403 | 335 | ketol-acid reductoisomerase; Provisional | 90.56 | |
| COG1052 | 324 | LdhA Lactate dehydrogenase and related dehydrogena | 90.44 | |
| cd05191 | 86 | NAD_bind_amino_acid_DH NAD(P) binding domain of am | 90.33 | |
| PRK06436 | 303 | glycerate dehydrogenase; Provisional | 90.25 | |
| PRK14186 | 297 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 90.23 | |
| PRK14172 | 278 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 89.88 | |
| PRK14194 | 301 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 89.84 | |
| PRK15469 | 312 | ghrA bifunctional glyoxylate/hydroxypyruvate reduc | 89.41 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 89.38 | |
| PRK14168 | 297 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 89.36 | |
| PRK00257 | 381 | erythronate-4-phosphate dehydrogenase; Validated | 89.34 | |
| PRK14193 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 89.33 | |
| TIGR01327 | 525 | PGDH D-3-phosphoglycerate dehydrogenase. This mode | 89.11 | |
| PRK14178 | 279 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 89.03 | |
| PRK14169 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 89.02 | |
| PRK14179 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 88.98 | |
| PRK14183 | 281 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 88.84 | |
| PRK14188 | 296 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 88.69 | |
| PRK11790 | 409 | D-3-phosphoglycerate dehydrogenase; Provisional | 88.69 | |
| PRK13581 | 526 | D-3-phosphoglycerate dehydrogenase; Provisional | 88.63 | |
| PRK14177 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 88.54 | |
| PLN02897 | 345 | tetrahydrofolate dehydrogenase/cyclohydrolase, put | 88.19 | |
| PRK14166 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 88.09 | |
| PRK14181 | 287 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 87.86 | |
| PRK07574 | 385 | formate dehydrogenase; Provisional | 87.61 | |
| PRK14187 | 294 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 87.46 | |
| PLN02616 | 364 | tetrahydrofolate dehydrogenase/cyclohydrolase, put | 87.43 | |
| PRK06823 | 315 | ornithine cyclodeaminase; Validated | 87.37 | |
| TIGR02371 | 325 | ala_DH_arch alanine dehydrogenase, Archaeoglobus f | 87.07 | |
| PLN02516 | 299 | methylenetetrahydrofolate dehydrogenase (NADP+) | 87.03 | |
| PRK14185 | 293 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 87.03 | |
| PRK14171 | 288 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 87.02 | |
| PRK14182 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 86.66 | |
| PF02423 | 313 | OCD_Mu_crystall: Ornithine cyclodeaminase/mu-cryst | 86.63 | |
| PRK14167 | 297 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 86.38 | |
| PRK14180 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 86.3 | |
| PRK14176 | 287 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 85.95 | |
| PRK07589 | 346 | ornithine cyclodeaminase; Validated | 85.92 | |
| PLN03139 | 386 | formate dehydrogenase; Provisional | 85.87 | |
| PRK07340 | 304 | ornithine cyclodeaminase; Validated | 85.87 | |
| PRK12480 | 330 | D-lactate dehydrogenase; Provisional | 85.61 | |
| PRK08605 | 332 | D-lactate dehydrogenase; Validated | 85.28 | |
| PRK08618 | 325 | ornithine cyclodeaminase; Validated | 84.66 | |
| PRK10792 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 84.65 | |
| TIGR01282 | 466 | nifD nitrogenase molybdenum-iron protein alpha cha | 84.11 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 83.77 | |
| COG0540 | 316 | PyrB Aspartate carbamoyltransferase, catalytic cha | 81.45 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 81.02 | |
| PRK06199 | 379 | ornithine cyclodeaminase; Validated | 80.69 | |
| PRK06407 | 301 | ornithine cyclodeaminase; Provisional | 80.62 | |
| PF07991 | 165 | IlvN: Acetohydroxy acid isomeroreductase, catalyti | 80.47 |
| >COG0499 SAM1 S-adenosylhomocysteine hydrolase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-154 Score=1155.18 Aligned_cols=378 Identities=56% Similarity=0.869 Sum_probs=371.8
Q ss_pred CCcceecCCCchhhhhhhHHHHHhhChhHHHHHHHhCCCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCC
Q 013345 11 GREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFS 90 (445)
Q Consensus 11 ~~~~~vkD~~la~~G~~~i~wa~~~MP~L~~l~~~~~~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~S 90 (445)
.++|+|||||||++|+++|+||++|||+|+++|++|+.+|||||.||++|+|||+|||+|++||+++||||+|+||||||
T Consensus 2 ~~~y~v~Disla~~Gr~~i~wAe~~MP~L~~iR~~f~~~kPlkG~~i~~~lH~t~kTAvLietL~a~GAeV~~a~cNplS 81 (420)
T COG0499 2 GQDYKVKDISLADEGRKEIEWAEREMPVLMAIREEFAEEKPLKGARIAGCLHMTAKTAVLIETLKAGGAEVRWASCNPLS 81 (420)
T ss_pred CccceecchhhhhhhhHHHHHHHhhChHHHHHHHHHhhcCCCCccEEEEEEeehHHHHHHHHHHHhcCceEEEecCCCCc
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHhC-CCeEEEecCCCHHHHHHHHHHHHhcCCCCCCcEEecCcchhhHHhhhchhhhhhhhhcCCCCCCCCC
Q 013345 91 TQDHAAAAIARD-SASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPAST 169 (445)
Q Consensus 91 Tqd~vaaaL~~~-Gi~V~A~~g~t~eey~~~~~~~l~~~~~~~p~lilDDGgdl~~~lh~g~~~~~~~~~~~~~~~~~~~ 169 (445)
|||||||||+.. |||||||||+|.+|||||++++|+|+ ||+|||||||++.++|
T Consensus 82 TqD~vaaAl~~~~GipVfA~kGe~~eeY~~~~~~vl~~~----p~iiiDDG~D~~~~vh--------------------- 136 (420)
T COG0499 82 TQDDVAAALAAKEGIPVFAWKGETLEEYYEAIDQVLDWE----PNIIIDDGGDLTKLVH--------------------- 136 (420)
T ss_pred ccHHHHHHHhhccCceEEEEcCCCHHHHHHHHHHHhCcC----CCEEEecCcceeeeee---------------------
Confidence 999999999666 99999999999999999999999994 9999999999999999
Q ss_pred ChHHHHHHHHHHhhhcccCCcchhhhhhhhccccchhHHHHHHHHHHHHcCCccccEEEeecccccccccccccccCcHH
Q 013345 170 DNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLP 249 (445)
Q Consensus 170 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~Gv~EETTTGv~Rl~~m~~~g~L~~Pvi~VNdS~tK~~fDN~yGtgqS~~ 249 (445)
.++|++++.|+|+||||||||+|||+|+++|.|+||+||||||.||++|||+||||||++
T Consensus 137 --------------------~~~~~l~~~i~G~tEETTTGV~RL~am~~~G~L~fPai~VNDs~tK~~FDNrYGtgqS~~ 196 (420)
T COG0499 137 --------------------LERPELLDAIKGGTEETTTGVHRLRAMEKDGVLKFPAINVNDSVTKSLFDNRYGTGQSLL 196 (420)
T ss_pred --------------------cccHHHHHHhcCCCcccchHHHHHHHHHhcCCcccceEeecchhhhcccccccccchhHH
Confidence 889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhchhhh----------------------------------------hcCCcceecHHHhhccCCEEEecCCCCC
Q 013345 250 DGLMRATDVMIA----------------------------------------LMEGLQVLTLEDVLSDADIFVTTTGNKD 289 (445)
Q Consensus 250 dgi~R~Tn~lia----------------------------------------~mdGf~V~~l~eA~~~aDifVTaTGn~~ 289 (445)
|||+|+||+|+| +||||+|++|++|++.||||||||||++
T Consensus 197 DgI~RaTn~liaGK~vVV~GYG~vGrG~A~~~rg~GA~ViVtEvDPI~AleA~MdGf~V~~m~~Aa~~gDifiT~TGnkd 276 (420)
T COG0499 197 DGILRATNVLLAGKNVVVAGYGWVGRGIAMRLRGMGARVIVTEVDPIRALEAAMDGFRVMTMEEAAKTGDIFVTATGNKD 276 (420)
T ss_pred HHHHhhhceeecCceEEEecccccchHHHHHhhcCCCeEEEEecCchHHHHHhhcCcEEEEhHHhhhcCCEEEEccCCcC
Confidence 999999999998 8999999999999999999999999999
Q ss_pred CCCHHHHhcCcCCcEEeCCCCCcccccccccccCCCCeeEecCCCceEEEecCCCceEEEEeCCccCCCCCCCCCCcccc
Q 013345 290 IIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVM 369 (445)
Q Consensus 290 vI~~eh~~~MKdgAILaN~Ghfd~EId~~~L~~~~~~~~~~vr~~V~~y~lpdGr~~i~LLaeGrlvNL~~a~GhP~eVM 369 (445)
||+.|||..|||||||||+||||+|||+++|++++. ++.++||+|++|.||||| +||||+|||||||+||+|||+|||
T Consensus 277 Vi~~eh~~~MkDgaIl~N~GHFd~EI~~~~L~~~~~-~~~~vr~~V~ey~l~~Gk-ri~llaeGRLvNLa~a~GHPs~VM 354 (420)
T COG0499 277 VIRKEHFEKMKDGAILANAGHFDVEIDVAGLEELAV-EKREVRPQVDEYELPDGK-RIILLAEGRLVNLAAATGHPSEVM 354 (420)
T ss_pred ccCHHHHHhccCCeEEecccccceeccHHHHHHhhh-hHhccccCceEEEcCCCC-EEEEEecceeeeeccCCCCcHHHh
Confidence 999999999999999999999999999999998866 999999999999999999 999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHhccCCCCCCCceeeCChHHHHHHHHHhhhhcCcccccCCHHHHhhcCCCCCCC
Q 013345 370 SCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGP 437 (445)
Q Consensus 370 d~sFa~Q~La~~~L~~~~~~g~~~~gV~~lP~~iDe~VA~~~L~~lg~~l~~Lt~~Q~~Yl~~~~~gp 437 (445)
|+|||+|+||++||+++++ +|+++||+||+++|++|||+||++||++||+||+||++||++|+.||
T Consensus 355 d~SFanQaLa~~~L~~n~~--~~~~~Vy~lP~~lD~~VArl~L~~~G~~i~~Lt~eQ~~Yl~~w~~Gt 420 (420)
T COG0499 355 DMSFANQALAQIYLVKNHG--KLEPGVYRLPKELDEEVARLKLEAMGIELDELTEEQAEYLGSWEEGT 420 (420)
T ss_pred hhhHHHHHHHHHHHHhccc--ccCCceeeCcHHHHHHHHHHHHHHhCceeeecCHHHHHHhCCCCCCC
Confidence 9999999999999999987 99999999999999999999999999999999999999999999998
|
|
| >KOG1370 consensus S-adenosylhomocysteine hydrolase [Coenzyme transport and metabolism] | Back alignment and domain information |
|---|
| >PLN02494 adenosylhomocysteinase | Back alignment and domain information |
|---|
| >PTZ00075 Adenosylhomocysteinase; Provisional | Back alignment and domain information |
|---|
| >PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional | Back alignment and domain information |
|---|
| >TIGR00936 ahcY adenosylhomocysteinase | Back alignment and domain information |
|---|
| >cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy) | Back alignment and domain information |
|---|
| >PF05221 AdoHcyase: S-adenosyl-L-homocysteine hydrolase; InterPro: IPR000043 Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase, 3 | Back alignment and domain information |
|---|
| >PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3 | Back alignment and domain information |
|---|
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
| >PRK08410 2-hydroxyacid dehydrogenase; Provisional | Back alignment and domain information |
|---|
| >cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
| >PLN02928 oxidoreductase family protein | Back alignment and domain information |
|---|
| >PRK06932 glycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
| >PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
| >COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PRK06487 glycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
| >PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF) | Back alignment and domain information |
|---|
| >PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional | Back alignment and domain information |
|---|
| >PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
| >PRK13243 glyoxylate reductase; Reviewed | Back alignment and domain information |
|---|
| >PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
| >PLN02306 hydroxypyruvate reductase | Back alignment and domain information |
|---|
| >PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional | Back alignment and domain information |
|---|
| >PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
| >PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
| >PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
| >cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase | Back alignment and domain information |
|---|
| >PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
| >PRK13403 ketol-acid reductoisomerase; Provisional | Back alignment and domain information |
|---|
| >COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only] | Back alignment and domain information |
|---|
| >cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins | Back alignment and domain information |
|---|
| >PRK06436 glycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
| >PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
| >PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
| >PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
| >PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional | Back alignment and domain information |
|---|
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
| >PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
| >PRK00257 erythronate-4-phosphate dehydrogenase; Validated | Back alignment and domain information |
|---|
| >PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
| >TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase | Back alignment and domain information |
|---|
| >PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
| >PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
| >PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
| >PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
| >PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
| >PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
| >PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
| >PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
| >PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative | Back alignment and domain information |
|---|
| >PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
| >PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
| >PRK07574 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
| >PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
| >PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative | Back alignment and domain information |
|---|
| >PRK06823 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
| >TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type | Back alignment and domain information |
|---|
| >PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+) | Back alignment and domain information |
|---|
| >PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
| >PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
| >PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
| >PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline [] | Back alignment and domain information |
|---|
| >PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
| >PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
| >PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
| >PRK07589 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
| >PLN03139 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
| >PRK07340 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
| >PRK12480 D-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
| >PRK08605 D-lactate dehydrogenase; Validated | Back alignment and domain information |
|---|
| >PRK08618 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
| >PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
| >TIGR01282 nifD nitrogenase molybdenum-iron protein alpha chain | Back alignment and domain information |
|---|
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
| >COG0540 PyrB Aspartate carbamoyltransferase, catalytic chain [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
| >PRK06199 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
| >PRK06407 ornithine cyclodeaminase; Provisional | Back alignment and domain information |
|---|
| >PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 445 | ||||
| 3ond_A | 488 | Crystal Structure Of Lupinus Luteus S-Adenosyl-L-Ho | 0.0 | ||
| 3dhy_A | 495 | Crystal Structures Of Mycobacterium Tuberculosis S- | 1e-138 | ||
| 3ce6_A | 494 | Crystal Structure Of Mycobacterium Tuberculosis S-A | 1e-138 | ||
| 1v8b_A | 479 | Crystal Structure Of A Hydrolase Length = 479 | 1e-138 | ||
| 3n58_A | 464 | Crystal Structure Of S-Adenosyl-L-Homocysteine Hydr | 1e-124 | ||
| 3d64_A | 494 | Crystal Structure Of S-Adenosyl-L-Homocysteine Hydr | 1e-123 | ||
| 3h9u_A | 436 | S-Adenosyl Homocysteine Hydrolase (Sahh) From Trypa | 1e-118 | ||
| 3g1u_A | 437 | Crystal Structure Of Leishmania Major S- Adenosylho | 1e-116 | ||
| 3nj4_A | 435 | Fluoro-Neplanocin A In Human S-Adenosylhomocysteine | 1e-107 | ||
| 1li4_A | 432 | Human S-Adenosylhomocysteine Hydrolase Complexed Wi | 1e-107 | ||
| 1d4f_A | 431 | Crystal Structure Of Recombinant Rat-Liver D244e Mu | 1e-107 | ||
| 1b3r_A | 431 | Rat Liver S-Adenosylhomocystein Hydrolase Length = | 1e-107 | ||
| 1xwf_A | 431 | K185n Mutated S-adenosylhomocysteine Hydrolase Leng | 1e-107 | ||
| 1a7a_A | 432 | Structure Of Human Placental S-adenosylhomocysteine | 1e-100 | ||
| 3gvp_A | 435 | Human Sahh-Like Domain Of Human Adenosylhomocystein | 1e-87 | ||
| 3mtg_A | 444 | Crystal Structure Of Human S-Adenosyl Homocysteine | 1e-86 |
| >pdb|3OND|A Chain A, Crystal Structure Of Lupinus Luteus S-Adenosyl-L-Homocysteine Hydrolase In Complex With Adenosine Length = 488 | Back alignment and structure |
|
| >pdb|3DHY|A Chain A, Crystal Structures Of Mycobacterium Tuberculosis S-Adenosyl- Homocysteine Hydrolase In Ternary Complex With Substrate An Inhibitors Length = 495 | Back alignment and structure |
| >pdb|3CE6|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis S-Adenosyl-L- Homocysteine Hydrolase In Ternary Complex With Nad And Adenosine Length = 494 | Back alignment and structure |
| >pdb|1V8B|A Chain A, Crystal Structure Of A Hydrolase Length = 479 | Back alignment and structure |
| >pdb|3N58|A Chain A, Crystal Structure Of S-Adenosyl-L-Homocysteine Hydrolase From Brucella Melitensis In Ternary Complex With Nad And Adenosine, Orthorhombic Form Length = 464 | Back alignment and structure |
| >pdb|3D64|A Chain A, Crystal Structure Of S-Adenosyl-L-Homocysteine Hydrolase From Burkholderia Pseudomallei Length = 494 | Back alignment and structure |
| >pdb|3H9U|A Chain A, S-Adenosyl Homocysteine Hydrolase (Sahh) From Trypanosoma Brucei Length = 436 | Back alignment and structure |
| >pdb|3G1U|A Chain A, Crystal Structure Of Leishmania Major S- Adenosylhomocysteine Hydrolase Length = 437 | Back alignment and structure |
| >pdb|3NJ4|A Chain A, Fluoro-Neplanocin A In Human S-Adenosylhomocysteine Hydrolase Length = 435 | Back alignment and structure |
| >pdb|1LI4|A Chain A, Human S-Adenosylhomocysteine Hydrolase Complexed With Neplanocin Length = 432 | Back alignment and structure |
| >pdb|1D4F|A Chain A, Crystal Structure Of Recombinant Rat-Liver D244e Mutant S- Adenosylhomocysteine Hydrolase Length = 431 | Back alignment and structure |
| >pdb|1B3R|A Chain A, Rat Liver S-Adenosylhomocystein Hydrolase Length = 431 | Back alignment and structure |
| >pdb|1XWF|A Chain A, K185n Mutated S-adenosylhomocysteine Hydrolase Length = 431 | Back alignment and structure |
| >pdb|1A7A|A Chain A, Structure Of Human Placental S-adenosylhomocysteine Hydrolase: Determination Of A 30 Selenium Atom Substructure From Data At A Single Wavelength Length = 432 | Back alignment and structure |
| >pdb|3GVP|A Chain A, Human Sahh-Like Domain Of Human Adenosylhomocysteinase 3 Length = 435 | Back alignment and structure |
| >pdb|3MTG|A Chain A, Crystal Structure Of Human S-Adenosyl Homocysteine Hydrolase Protein Length = 444 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A* Length = 488 | Back alignment and structure |
|---|
Score = 807 bits (2085), Expect = 0.0
Identities = 405/485 (83%), Positives = 431/485 (88%), Gaps = 40/485 (8%)
Query: 1 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGS 60
MAL VEK+ SGRE+KVKD+SQADFGRLEIELAEVEMPGLMA R+EFGPSQPFKGAKITGS
Sbjct: 4 MALLVEKTTSGREYKVKDMSQADFGRLEIELAEVEMPGLMASRSEFGPSQPFKGAKITGS 63
Query: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWC 120
LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSA+VFAWKGETLQEYWWC
Sbjct: 64 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWC 123
Query: 121 TEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTI 180
TE+ALDWGPGGGPDLIVDDGGD TLLIHEGVKAEEIYEK+G+ PDP STDNAEF+IVL+I
Sbjct: 124 TERALDWGPGGGPDLIVDDGGDTTLLIHEGVKAEEIYEKSGQFPDPDSTDNAEFKIVLSI 183
Query: 181 IRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDN 240
I++GLK DPK+YHKMK+R+VGVSEETTTGVKRLYQMQ NGTLLFPAINVNDSVTKSKFDN
Sbjct: 184 IKEGLKTDPKRYHKMKDRVVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDN 243
Query: 241 LYGCRHSLPDGLMRATDVMI---------------------------------------- 260
LYGCRHSLPDGLMRATDVMI
Sbjct: 244 LYGCRHSLPDGLMRATDVMIAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQ 303
Query: 261 ALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL 320
A MEGLQVLTLEDV+S+ADIFVTTTGNKDIIM+DHMKKMKNNAIVCNIGHFDNEIDMLGL
Sbjct: 304 ATMEGLQVLTLEDVVSEADIFVTTTGNKDIIMLDHMKKMKNNAIVCNIGHFDNEIDMLGL 363
Query: 321 ETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 380
ET+PGVKRITIKPQTDRWVFPETN+GII+LAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ
Sbjct: 364 ETHPGVKRITIKPQTDRWVFPETNTGIIILAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 423
Query: 381 LELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKP 440
LELW EKS+GKYEKKVYVLPKHLDEKVAALHL KLGAKLT+L+K+QADYISV +GPYKP
Sbjct: 424 LELWNEKSSGKYEKKVYVLPKHLDEKVAALHLEKLGAKLTKLSKDQADYISVPVEGPYKP 483
Query: 441 LHYRY 445
HYRY
Sbjct: 484 FHYRY 488
|
| >3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus} Length = 464 | Back alignment and structure |
|---|
| >1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3 Length = 479 | Back alignment and structure |
|---|
| >3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A* Length = 494 | Back alignment and structure |
|---|
| >3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A* Length = 494 | Back alignment and structure |
|---|
| >3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A* Length = 436 | Back alignment and structure |
|---|
| >3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A* Length = 435 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 445 | |||
| 3n58_A | 464 | Adenosylhomocysteinase; ssgcid, hydrolase, structu | 100.0 | |
| 3ond_A | 488 | Adenosylhomocysteinase; plant protein, enzyme-subs | 100.0 | |
| 3h9u_A | 436 | Adenosylhomocysteinase; NAD CO-factor complex, str | 100.0 | |
| 3gvp_A | 435 | Adenosylhomocysteinase 3; protein CO-factor comple | 100.0 | |
| 1v8b_A | 479 | Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2 | 100.0 | |
| 3ce6_A | 494 | Adenosylhomocysteinase; protein-substrate complex, | 100.0 | |
| 3d64_A | 494 | Adenosylhomocysteinase; structural genomics, ssgci | 100.0 | |
| 3ngx_A | 276 | Bifunctional protein fold; methylenetetrahydrofola | 94.27 | |
| 2pi1_A | 334 | D-lactate dehydrogenase; oxidoreductase, D-LDH, NA | 94.25 | |
| 4a5o_A | 286 | Bifunctional protein fold; oxidoreductase, hydrola | 94.19 | |
| 3kb6_A | 334 | D-lactate dehydrogenase; oxidoreductase, D-LDH, NA | 94.12 | |
| 3oet_A | 381 | Erythronate-4-phosphate dehydrogenase; structural | 93.86 | |
| 3p2o_A | 285 | Bifunctional protein fold; structural genomics, ce | 93.73 | |
| 3l07_A | 285 | Bifunctional protein fold; structural genomics, ID | 93.7 | |
| 4g2n_A | 345 | D-isomer specific 2-hydroxyacid dehydrogenase, Na; | 93.48 | |
| 1wwk_A | 307 | Phosphoglycerate dehydrogenase; riken structural g | 93.42 | |
| 4hy3_A | 365 | Phosphoglycerate oxidoreductase; PSI-biology, stru | 93.32 | |
| 2yq5_A | 343 | D-isomer specific 2-hydroxyacid dehydrogenase; oxi | 93.29 | |
| 4e5n_A | 330 | Thermostable phosphite dehydrogenase; D-2-hydroxya | 93.03 | |
| 3gg9_A | 352 | D-3-phosphoglycerate dehydrogenase oxidoreductase; | 92.93 | |
| 3jtm_A | 351 | Formate dehydrogenase, mitochondrial; mitochondrio | 92.79 | |
| 2o4c_A | 380 | Erythronate-4-phosphate dehydrogenase; erythronate | 92.67 | |
| 2ekl_A | 313 | D-3-phosphoglycerate dehydrogenase; structural gen | 92.52 | |
| 1vl6_A | 388 | Malate oxidoreductase; TM0542, NAD-dependent malic | 92.49 | |
| 4a26_A | 300 | Putative C-1-tetrahydrofolate synthase, cytoplasm; | 92.46 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 92.34 | |
| 2g76_A | 335 | 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor | 92.24 | |
| 1gdh_A | 320 | D-glycerate dehydrogenase; oxidoreductase(CHOH (D) | 91.82 | |
| 1qp8_A | 303 | Formate dehydrogenase; oxidoreductase; HET: NDP; 2 | 91.78 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 91.75 | |
| 1ygy_A | 529 | PGDH, D-3-phosphoglycerate dehydrogenase; oxidored | 91.71 | |
| 2c2x_A | 281 | Methylenetetrahydrofolate dehydrogenase- methenylt | 91.65 | |
| 2j6i_A | 364 | Formate dehydrogenase; oxidoreductase, D-specific- | 91.59 | |
| 3evt_A | 324 | Phosphoglycerate dehydrogenase; structural genomic | 91.56 | |
| 3hg7_A | 324 | D-isomer specific 2-hydroxyacid dehydrogenase FAM | 91.29 | |
| 1mx3_A | 347 | CTBP1, C-terminal binding protein 1; nuclear prote | 91.24 | |
| 1dxy_A | 333 | D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxyc | 91.17 | |
| 1a4i_A | 301 | Methylenetetrahydrofolate dehydrogenase / methenyl | 91.0 | |
| 3gvx_A | 290 | Glycerate dehydrogenase related protein; NYSGXRC, | 90.71 | |
| 1xdw_A | 331 | NAD+-dependent (R)-2-hydroxyglutarate dehydrogenas | 90.69 | |
| 1b0a_A | 288 | Protein (fold bifunctional protein); folate, dehyd | 90.66 | |
| 1edz_A | 320 | 5,10-methylenetetrahydrofolate dehydrogenase; nucl | 90.51 | |
| 4dgs_A | 340 | Dehydrogenase; structural genomics, PSI-biology, N | 90.47 | |
| 3pp8_A | 315 | Glyoxylate/hydroxypyruvate reductase A; structural | 90.19 | |
| 1j4a_A | 333 | D-LDH, D-lactate dehydrogenase; NAD-dependent dehy | 89.97 | |
| 4b4u_A | 303 | Bifunctional protein fold; oxidoreductase; HET: NA | 89.94 | |
| 3l3e_A | 107 | DNA topoisomerase 2-binding protein 1; BRCT domain | 89.62 | |
| 2nac_A | 393 | NAD-dependent formate dehydrogenase; oxidoreductas | 89.12 | |
| 4dio_A | 405 | NAD(P) transhydrogenase subunit alpha PART 1; stru | 88.5 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 88.42 | |
| 1sc6_A | 404 | PGDH, D-3-phosphoglycerate dehydrogenase; alloster | 88.34 | |
| 3k5p_A | 416 | D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, | 88.18 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 87.93 | |
| 2gcg_A | 330 | Glyoxylate reductase/hydroxypyruvate reductase; NA | 87.84 | |
| 2cuk_A | 311 | Glycerate dehydrogenase/glyoxylate reductase; stru | 87.62 | |
| 2w2k_A | 348 | D-mandelate dehydrogenase; 2-hydroxyacid dehydroge | 87.53 | |
| 1x13_A | 401 | NAD(P) transhydrogenase subunit alpha; NAD(H)-bind | 87.02 | |
| 2a9f_A | 398 | Putative malic enzyme ((S)-malate:NAD+ oxidoreduct | 86.76 | |
| 2dbq_A | 334 | Glyoxylate reductase; D-3-phosphoglycerate dehydro | 86.75 | |
| 3ba1_A | 333 | HPPR, hydroxyphenylpyruvate reductase; two domain | 85.74 | |
| 2d0i_A | 333 | Dehydrogenase; structural genomics, NPPSFA, nation | 83.09 | |
| 3hdj_A | 313 | Probable ornithine cyclodeaminase; APC62486, borde | 82.87 | |
| 3pdi_A | 483 | Nitrogenase MOFE cofactor biosynthesis protein NI; | 81.52 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 80.01 |
| >3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-149 Score=1163.27 Aligned_cols=422 Identities=61% Similarity=0.959 Sum_probs=407.8
Q ss_pred CcceecCCCchhhhhhhHHHHHhhChhHHHHHHHhCCCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCC
Q 013345 12 REFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFST 91 (445)
Q Consensus 12 ~~~~vkD~~la~~G~~~i~wa~~~MP~L~~l~~~~~~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~ST 91 (445)
++|+||||+||++||++|+||++|||+||++|++|+++|||+|+||++|+|||+|||+|++||+++||||+|||||||||
T Consensus 3 ~~~~v~d~~la~~G~~~i~~ae~~MP~L~~~r~~~~~~kPl~G~rI~~~lH~t~~TavlietL~a~GAev~~~~cN~~ST 82 (464)
T 3n58_A 3 GSMVVKDISLADWGRKELDIAETEMPGLMAAREEFGKSQPLKGARISGSLHMTIQTAVLIETLKVLGAEVRWASCNIFST 82 (464)
T ss_dssp --CEESCGGGHHHHHHHHHHHHTTCHHHHHHHHHHTTTCTTTTCEEEEESCCSHHHHHHHHHHHHTTCEEEEECSSTTCC
T ss_pred CCccccCchhHHHHHHHHHHHHhhCHHHHHHHHHHhccCCCCCCEEEEEEecHHHHHHHHHHHHHcCCeEEEecCCCCCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCcEEecCcchhhHHhhhchhhhhhhhhcCCCCCCCCCCh
Q 013345 92 QDHAAAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDN 171 (445)
Q Consensus 92 qd~vaaaL~~~Gi~V~A~~g~t~eey~~~~~~~l~~~~~~~p~lilDDGgdl~~~lh~g~~~~~~~~~~~~~~~~~~~~~ 171 (445)
||||||||++.|||||||||+|.||||||++++|+|+++.+||+|||||||||.++|+|.++|++. +.++.| .|
T Consensus 83 qd~~aaal~~~gi~v~A~kget~eey~~~~~~~l~~~~~~~p~~ilDDGgDl~~~~h~~~~~~~~~---~~~~~~---~~ 156 (464)
T 3n58_A 83 QDHAAAAIAATGTPVFAVKGETLEEYWTYTDQIFQWPDGEPSNMILDDGGDATMYILIGARAEAGE---DVLSNP---QS 156 (464)
T ss_dssp CHHHHHHHHHTTCCEEECTTCCHHHHHHHHHHTTCCTTSCCCSEEEESSSHHHHHHHHHHHHHTTC---CCSSSC---CS
T ss_pred cHHHHHHHHhcCCeEEEeCCCCHHHHHHHHHHHHcccCCCCCCEEEECchHHHHHHHhhhhhhccc---ccCCCC---Cc
Confidence 999999999999999999999999999999999999887789999999999999999999999773 334444 47
Q ss_pred HHHHHHHHHHhhhcccCCcchhhhhhhhccccchhHHHHHHHHHHHHcCCccccEEEeecccccccccccccccCcHHHH
Q 013345 172 AEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDG 251 (445)
Q Consensus 172 ~~~~~~~~~l~~~~~~~~~~~~~~~~~i~Gv~EETTTGv~Rl~~m~~~g~L~~Pvi~VNdS~tK~~fDN~yGtgqS~~dg 251 (445)
+|+++|+..|++.++.+|++||+++++|+|+||||||||+||++|+++|.|+|||||||||+||++|||+|||+||++|+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~G~~EeTtTGv~rL~~m~~~g~L~~PvinVnds~tK~~fDn~yG~~eslvdg 236 (464)
T 3n58_A 157 EEEEVLFAQIKKRMAATPGFFTKQRAAIKGVTEETTTGVNRLYQLQKKGLLPFPAINVNDSVTKSKFDNKYGCKESLVDG 236 (464)
T ss_dssp HHHHHHHHHHHHHHHHSTTHHHHHHHHCCEEEECSHHHHHHHHHHHHHTCCCSCEEECTTSHHHHTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCcchhHHHHhhccceeeccccchHHHHHHHHcCCCCCCEEeeccHhhhhhhhhhhcchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhchhhh----------------------------------------hcCCcceecHHHhhccCCEEEecCCCCCCC
Q 013345 252 LMRATDVMIA----------------------------------------LMEGLQVLTLEDVLSDADIFVTTTGNKDII 291 (445)
Q Consensus 252 i~R~Tn~lia----------------------------------------~mdGf~V~~l~eA~~~aDifVTaTGn~~vI 291 (445)
|+|+||++++ .|+||++++++++++.+||||++||++++|
T Consensus 237 I~Ratg~~L~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~~vv~LeElL~~ADIVv~atgt~~lI 316 (464)
T 3n58_A 237 IRRGTDVMMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEVVTLDDAASTADIVVTTTGNKDVI 316 (464)
T ss_dssp HHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECCHHHHGGGCSEEEECCSSSSSB
T ss_pred HHHhcCCcccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHhcCceeccHHHHHhhCCEEEECCCCcccc
Confidence 9999987776 589999999999999999999999999999
Q ss_pred CHHHHhcCcCCcEEeCCCCCcccccccccccCCCCeeEecCCCceEEEecCCCceEEEEeCCccCCCCCCCCCCccccch
Q 013345 292 MVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSC 371 (445)
Q Consensus 292 ~~eh~~~MKdgAILaN~Ghfd~EId~~~L~~~~~~~~~~vr~~V~~y~lpdGr~~i~LLaeGrlvNL~~a~GhP~eVMd~ 371 (445)
+.+||++||+||||+|+|||++|||+++|.+ +++++|||||++|++|||| +||||+|||||||+|++|||+||||+
T Consensus 317 ~~e~l~~MK~GAILINvGRgdvEID~~aL~~---~~~~~ik~~v~~~~~~~g~-~i~lLaeGrlvNL~~a~GhP~~vm~~ 392 (464)
T 3n58_A 317 TIDHMRKMKDMCIVGNIGHFDNEIQVAALRN---LKWTNVKPQVDLIEFPDGK-RLILLSEGRLLNLGNATGHPSFVMSA 392 (464)
T ss_dssp CHHHHHHSCTTEEEEECSSSTTTBTCGGGTT---SEEEEEETTEEEEECTTSC-EEEEEGGGSBHHHHHSCCSCHHHHHH
T ss_pred CHHHHhcCCCCeEEEEcCCCCcccCHHHHHh---CccccccCCeeEEEeCCCC-EEEEEeCCceecccCCCCChHHHHhH
Confidence 9999999999999999999999999999986 3888999999999999999 99999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhccCCCCCCCceeeCChHHHHHHHHHhhhhcCcccccCCHHHHhhcCCCCCCCCCCCCCCC
Q 013345 372 SFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKPLHYRY 445 (445)
Q Consensus 372 sFa~Q~La~~~L~~~~~~g~~~~gV~~lP~~iDe~VA~~~L~~lg~~l~~Lt~~Q~~Yl~~~~~gp~k~~~y~y 445 (445)
||++|+|||+|||++++ +|++|||.||+++||+||++||++||++||+||+||++||++|++||||||||||
T Consensus 393 sf~~Q~la~~~l~~~~~--~~~~~v~~lP~~lDe~VA~l~L~~~g~~l~~lt~~Q~~yl~~~~~gp~k~~~yry 464 (464)
T 3n58_A 393 SFTNQVLGQIELFTRTD--AYKNEVYVLPKHLDEKVARLHLDKLGAKLTVLSEEQAAYIGVTPQGPFKSEHYRY 464 (464)
T ss_dssp HHHHHHHHHHHHHHSGG--GCCSSEECCCHHHHHHHHHHHHGGGTCCCCCCCHHHHHHHTCCTTSCCSCTTCCC
T ss_pred HHHHHHHHHHHHHhCcc--ccCCCeeECCHHHHHHHHHHHHHHcCCEeccCCHHHHHHcCCCCCCCCCCccCCC
Confidence 99999999999999987 8999999999999999999999999999999999999999999999999999999
|
| >3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A* | Back alignment and structure |
|---|
| >3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A* | Back alignment and structure |
|---|
| >3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A* | Back alignment and structure |
|---|
| >1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3 | Back alignment and structure |
|---|
| >3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A* | Back alignment and structure |
|---|
| >3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A* | Back alignment and structure |
|---|
| >3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A | Back alignment and structure |
|---|
| >4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
| >3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus} | Back alignment and structure |
|---|
| >3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp} | Back alignment and structure |
|---|
| >3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
| >3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis} | Back alignment and structure |
|---|
| >4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP} | Back alignment and structure |
|---|
| >1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
| >4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli} | Back alignment and structure |
|---|
| >2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A* | Back alignment and structure |
|---|
| >4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A* | Back alignment and structure |
|---|
| >3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum} | Back alignment and structure |
|---|
| >3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A | Back alignment and structure |
|---|
| >2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
| >2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
| >1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A* | Back alignment and structure |
|---|
| >4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major} | Back alignment and structure |
|---|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
| >2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
| >1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1 | Back alignment and structure |
|---|
| >1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1 | Back alignment and structure |
|---|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
| >1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A* | Back alignment and structure |
|---|
| >2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A | Back alignment and structure |
|---|
| >2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A | Back alignment and structure |
|---|
| >3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum} | Back alignment and structure |
|---|
| >3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp} | Back alignment and structure |
|---|
| >1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A* | Back alignment and structure |
|---|
| >1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1 | Back alignment and structure |
|---|
| >1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A* | Back alignment and structure |
|---|
| >3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum} | Back alignment and structure |
|---|
| >1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans} | Back alignment and structure |
|---|
| >1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2 | Back alignment and structure |
|---|
| >1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A* | Back alignment and structure |
|---|
| >4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
| >3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A | Back alignment and structure |
|---|
| >1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A* | Back alignment and structure |
|---|
| >4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A* | Back alignment and structure |
|---|
| >2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A | Back alignment and structure |
|---|
| >4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
| >1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A* | Back alignment and structure |
|---|
| >3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
| >2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A | Back alignment and structure |
|---|
| >2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus} | Back alignment and structure |
|---|
| >2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B | Back alignment and structure |
|---|
| >1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* | Back alignment and structure |
|---|
| >2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes} | Back alignment and structure |
|---|
| >2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A* | Back alignment and structure |
|---|
| >3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A* | Back alignment and structure |
|---|
| >2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
| >3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis} | Back alignment and structure |
|---|
| >3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii} | Back alignment and structure |
|---|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 445 | ||||
| d1v8ba2 | 313 | c.23.12.3 (A:4-234,A:398-479) S-adenosylhomocystei | 1e-100 | |
| d1v8ba2 | 313 | c.23.12.3 (A:4-234,A:398-479) S-adenosylhomocystei | 8e-51 | |
| d1li4a2 | 267 | c.23.12.3 (A:3-189,A:353-432) S-adenosylhomocystei | 7e-85 | |
| d1li4a2 | 267 | c.23.12.3 (A:3-189,A:353-432) S-adenosylhomocystei | 1e-38 | |
| d1v8ba1 | 163 | c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolas | 9e-50 | |
| d1li4a1 | 163 | c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolas | 3e-39 |
| >d1v8ba2 c.23.12.3 (A:4-234,A:398-479) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Formate/glycerate dehydrogenase catalytic domain-like family: S-adenosylhomocystein hydrolase domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Score = 299 bits (768), Expect = e-100
Identities = 131/246 (53%), Positives = 178/246 (72%), Gaps = 9/246 (3%)
Query: 13 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIE 72
+ KVKD+S A FG++++E++E EMPGLM R E+G QP K AKITG LHMT++ A+LIE
Sbjct: 2 KSKVKDISLAPFGKMQMEISENEMPGLMRIREEYGKDQPLKNAKITGCLHMTVECALLIE 61
Query: 73 TLTALGAEVRWCSCNIFSTQDHAAAAI-ARDSASVFAWKGETLQEYWWCTEKALDWG--P 129
TL LGA++RWCSCNI+ST D+AAAA+ ++ +VFAWK ETL+EYWWC E AL WG
Sbjct: 62 TLQKLGAQIRWCSCNIYSTADYAAAAVSTLENVTVFAWKNETLEEYWWCVESALTWGDGD 121
Query: 130 GGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADP 189
GPD+IVDDGGDATLL+H+GV+ E++YE+ LPDP N E + LT++++ + +P
Sbjct: 122 DNGPDMIVDDGGDATLLVHKGVEYEKLYEEKNILPDPEKAKNEEERCFLTLLKNSILKNP 181
Query: 190 KKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDN------LYG 243
KK+ + ++++GVSEETTTGV RL +M + LLF AINVND+VTK K+D+
Sbjct: 182 KKWTNIAKKIIGVSEETTTGVLRLKKMDKQNELLFTAINVNDAVTKQKYDHPAFVMSFSF 241
Query: 244 CRHSLP 249
C +
Sbjct: 242 CNQTFA 247
|
| >d1v8ba2 c.23.12.3 (A:4-234,A:398-479) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} Length = 313 | Back information, alignment and structure |
|---|
| >d1li4a2 c.23.12.3 (A:3-189,A:353-432) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} Length = 267 | Back information, alignment and structure |
|---|
| >d1li4a2 c.23.12.3 (A:3-189,A:353-432) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} Length = 267 | Back information, alignment and structure |
|---|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} Length = 163 | Back information, alignment and structure |
|---|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} Length = 163 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 445 | |||
| d1v8ba2 | 313 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 100.0 | |
| d1li4a2 | 267 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 100.0 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 100.0 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 100.0 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 95.9 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 95.8 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 95.48 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 94.45 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 93.88 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 93.45 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 93.41 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 92.91 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 91.23 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 90.47 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 87.13 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 86.85 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 85.92 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 84.18 | |
| d1omoa_ | 320 | Archaeal alanine dehydrogenase {Archaeon Archaeogl | 81.47 |
| >d1v8ba2 c.23.12.3 (A:4-234,A:398-479) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Formate/glycerate dehydrogenase catalytic domain-like family: S-adenosylhomocystein hydrolase domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=100.00 E-value=7.2e-114 Score=854.43 Aligned_cols=309 Identities=58% Similarity=1.027 Sum_probs=303.4
Q ss_pred cceecCCCchhhhhhhHHHHHhhChhHHHHHHHhCCCCCCCCcEEEeeeccchhHHHHHHHHHhCCCEEEEeecCCCCCh
Q 013345 13 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 92 (445)
Q Consensus 13 ~~~vkD~~la~~G~~~i~wa~~~MP~L~~l~~~~~~~kPl~G~rI~~~lHlt~kTa~li~tL~a~GAeV~~~~~np~STq 92 (445)
.|+||||+||++||++|+||++|||+||+||++|+.+|||||+||++|||||+|||+|++||+++||+|+||||||||||
T Consensus 2 ~s~VkDisLA~~G~~~IewAe~eMP~L~alr~~~~~~kPlkG~rIagcLHmt~qTAvLietL~~~GAeV~~~scNp~STQ 81 (313)
T d1v8ba2 2 KSKVKDISLAPFGKMQMEISENEMPGLMRIREEYGKDQPLKNAKITGCLHMTVECALLIETLQKLGAQIRWCSCNIYSTA 81 (313)
T ss_dssp CCBCSCGGGHHHHHHHHHHHGGGCHHHHHHHHHSTTTCTTTTCEEEEESCCSHHHHHHHHHHHHTTCEEEEECSSSSCCC
T ss_pred CCccCChhhhHHhHHHHHHHHHHCHHHHHHHHHHhccCCCCCCEEEEEEccHHHHHHHHHHHHHhCCeeEEeccCCcccc
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHh-CCCeEEEecCCCHHHHHHHHHHHHhcCCC--CCCcEEecCcchhhHHhhhchhhhhhhhhcCCCCCCCCC
Q 013345 93 DHAAAAIAR-DSASVFAWKGETLQEYWWCTEKALDWGPG--GGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPAST 169 (445)
Q Consensus 93 d~vaaaL~~-~Gi~V~A~~g~t~eey~~~~~~~l~~~~~--~~p~lilDDGgdl~~~lh~g~~~~~~~~~~~~~~~~~~~ 169 (445)
|||||||++ .||+||||||+|.+|||||++++|+|+++ .+|++|||||||||.++|+|.++|..++..+.+|.|+.+
T Consensus 82 D~vAAAl~~~~gi~VfAwkGet~eey~~~i~~~L~~~dg~~~~P~~IlDDGgDlt~~vh~g~~~E~l~~~~~~lp~p~~~ 161 (313)
T d1v8ba2 82 DYAAAAVSTLENVTVFAWKNETLEEYWWCVESALTWGDGDDNGPDMIVDDGGDATLLVHKGVEYEKLYEEKNILPDPEKA 161 (313)
T ss_dssp HHHHHHHTTSTTEEEECCTTCCHHHHHHHHHHHHCCSSSSSCSCSEEEESSSHHHHHHHHHHHHHHHHHHHCCCCCGGGC
T ss_pred hHHHHHhhccCCceEEEecCCCHHHHHHHHHHHHhcCCCCCCCCcEEeehhHHHHHHHHhcchhccccccccccCCCCCC
Confidence 999999987 79999999999999999999999999765 389999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHhhhcccCCcchhhhhhhhccccchhHHHHHHHHHHHHcCCccccEEEeecccccccccccccccCcHH
Q 013345 170 DNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLP 249 (445)
Q Consensus 170 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~Gv~EETTTGv~Rl~~m~~~g~L~~Pvi~VNdS~tK~~fDN~yGtgqS~~ 249 (445)
.|++++|++.+|++.+.++|++|++++++|+|+||||||||+||++|.++|.|.||+||||||+||++||
T Consensus 162 ~n~~~~~~~~~lk~~~~~~~~~~~~~~~~i~GvsEETTTGV~RL~~m~~~g~L~fPainVNDsvtK~~F~---------- 231 (313)
T d1v8ba2 162 KNEEERCFLTLLKNSILKNPKKWTNIAKKIIGVSEETTTGVLRLKKMDKQNELLFTAINVNDAVTKQKYD---------- 231 (313)
T ss_dssp SSHHHHHHHHHHHHHHTTCTTHHHHHHTTCCEEEECSHHHHHHHHHHHHTTCCCSEEEECTTSHHHHTTH----------
T ss_pred CCHHHHHHHHHHHHHHhhCcHHHHHhhhcEEEEeCCCCccHHhHHHHHHcCcceeeeEecCcccCHHHhC----------
Confidence 9999999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred HHHHhhhchhhhhcCCcceecHHHhhccCCEEEecCCCCCCCCHHHHhcCcCCcEEeCCCCCcccccccccccCCCCeeE
Q 013345 250 DGLMRATDVMIALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRI 329 (445)
Q Consensus 250 dgi~R~Tn~lia~mdGf~V~~l~eA~~~aDifVTaTGn~~vI~~eh~~~MKdgAILaN~Ghfd~EId~~~L~~~~~~~~~ 329 (445)
T Consensus 232 -------------------------------------------------------------------------------- 231 (313)
T d1v8ba2 232 -------------------------------------------------------------------------------- 231 (313)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ecCCCceEEEecCCCceEEEEeCCccCCCCCCCCCCccccchhHHHHHHHHHHHHhccCCCCCCCceeeCChHHHHHHHH
Q 013345 330 TIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVAA 409 (445)
Q Consensus 330 ~vr~~V~~y~lpdGr~~i~LLaeGrlvNL~~a~GhP~eVMd~sFa~Q~La~~~L~~~~~~g~~~~gV~~lP~~iDe~VA~ 409 (445)
||+||||+|||+|+||+++|+.+.++++|+++||.||+++||+||+
T Consensus 232 ----------------------------------~P~~vMd~SFanQ~La~~~l~~~~~~~~~~~~Vy~lP~~lDe~vA~ 277 (313)
T d1v8ba2 232 ----------------------------------HPAFVMSFSFCNQTFAQLDLWQNKDTNKYENKVYLLPKHLDEKVAL 277 (313)
T ss_dssp ----------------------------------SCHHHHHHHHHHHHHHHHHHHHTTTSSSCCSSEECCCHHHHHHHHH
T ss_pred ----------------------------------CcHHHHHHHHHhHHHHHHHHHhcCcccccCCcEEECChHHHHHHHH
Confidence 9999999999999999999999987678999999999999999999
Q ss_pred HhhhhcCcccccCCHHHHhhcCCCCCCCCCCCCCCC
Q 013345 410 LHLGKLGAKLTRLTKEQADYISVSADGPYKPLHYRY 445 (445)
Q Consensus 410 ~~L~~lg~~l~~Lt~~Q~~Yl~~~~~gp~k~~~y~y 445 (445)
+||++||++||+||++|++||++|++||||||||||
T Consensus 278 l~L~~~g~~id~Lt~~Q~~Yl~~~~~gp~k~~~y~y 313 (313)
T d1v8ba2 278 YHLKKLNASLTELDDNQCQFLGVNKSGPFKSNEYRY 313 (313)
T ss_dssp HHHGGGTCCCCCCCHHHHHHHTCCTTSCCSCTTCCC
T ss_pred HHHHhcCCEeccCCHHHHHHCCCCCCCCCCCCCCCC
Confidence 999999999999999999999999999999999999
|
| >d1li4a2 c.23.12.3 (A:3-189,A:353-432) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
| >d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|