Citrus Sinensis ID: 013425

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440---
MSSWELQENFGPSSFINLEGIRMQLETARSMSAGKLSNYNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTVLEVLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAWS
cccccccccccccccccccccccEEcccccccccccccccccccEEEEEEEEEEEccccccccEEEEEEEEcccccccccccEEEEEEcccHHHHHHHHHHHccccccEEEEccccccccccccccccccccccHHHHHHHccccccccccHHHHHHHHHHcccHHHHHHHHHHcccccHHHHHHHHHcccccHHHHHHHcccccccHHHHHHHccccccccccccccccccccEEEEEEEEEEEEccccccccccccHHHHccccccccEEEEEEEccccccccccccEEEEcccccHHHHHHHHHHHHHcccccccccEEEEEccccccccccHHHHHHHHHHcccccccccccEEEEEccccccccHHHHHHHHcHHHHHHHHHcccEEEEEccccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccccccccc
cccEEcccccccccccccccEEEEccccHHHcccccccccccccccEEEEEEEEcccccccccEEEEEEEEccccEEEccccEEEEEccccHHHHHHHHHHHccccccEEEEEEccccccccccccccccccccHHHHHHHHHHHccccccHHHHHHHHHHccHHHHHHHHHHccccHHHHHHHHHcccccccHHHHHHHcccEcccHHHHHHHccEcccEEEEccccccccccEEEEEEEccEEEcccccEEEcHHHHHHHHcccccccEEEEEEEccccccccccccEEEEccHHHHHHHHHHHHHHHHcccccccccEEEEEccccccccccHHHHHHHHHHcccEEcccccEEEEEEcccccccccHHHHHHHcHHHHHHHHHcccEEEEEEccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccEEEEEcc
msswelqenfgpssfinLEGIRMQLETARsmsagklsnynnKAVCFLKMiknqpltksgsgkdvhhFEFEFVSAAIEYEVGdvleilpsqdpaaVDTFIQrcnldpdalITVQHKEMknylpdihknttevpIKLRTFVELTMdvtsasprRYFFEVMSYFATAEHEKERLqyfaspegrddlyKYNQKERRTVLEVledfpsvqmpidwlvqlvpplktrafsisssplahpnqvHLTVSVVSwttpykrkrtglcsvwlagldpqqgiyipawfqkgslprpppsvpliligpgtgcapfrgFVEERaiqsssgpaapiifffgcrneddFLYRELWLSHslndgvfseakgggfyvafsrkqpqKVYVQHKMLEQSQRIWNLLLSKASIYVAgsatkmpsdvWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAWS
msswelqenfgpssfINLEGIRMQLETARSMSAGKLSNYNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYlpdihknttevpIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLqyfaspegrddlYKYNQKERRTVLEVledfpsvqmPIDWLVQLVPPLKTRAFSISssplahpnqvhLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSkegeasrdSAANWLKALQRAGRYHVEAWS
MSSWELQENFGPSSFINLEGIRMQLETARSMSAGKLSNYNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTVLEVLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAWS
**************FINLEGIRM***********KLSNYNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTVLEVLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIPAWFQKGSLPR*PPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIV************NWLKALQRAGRY******
**SW****NF*********************************VCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKE********HKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTVLEVLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEG*****SAANWLKALQRAGRYHVEAWS
********NFGPSSFINLEGIRMQLETARSMSAGKLSNYNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTVLEVLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAWS
**SWELQENFGPSSFINLEGIRMQLETARSMSAGKLSNYNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTVLEVLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAWS
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MSSWELQENFGPSSFINLEGIRMQLETARSMSAGKLSNYNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTVLEVLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNEDDFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAWS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query443 2.2.26 [Sep-21-2011]
Q6NPS8623 NADPH-dependent diflavin yes no 0.943 0.670 0.681 1e-173
Q9UHB4597 NADPH-dependent diflavin yes no 0.853 0.633 0.400 2e-73
Q6PFP6595 NADPH-dependent diflavin yes no 0.841 0.626 0.385 1e-72
A2AI05598 NADPH-dependent diflavin no no 0.853 0.632 0.377 5e-65
Q54JL0633 NADPH-dependent diflavin yes no 0.862 0.603 0.360 1e-64
Q6NRG5600 NADPH-dependent diflavin N/A no 0.855 0.631 0.34 4e-63
Q1JPJ0577 NADPH-dependent diflavin yes no 0.805 0.618 0.376 2e-61
Q3SYT8678 NADPH--cytochrome P450 re no no 0.927 0.606 0.311 5e-59
P16435677 NADPH--cytochrome P450 re no no 0.900 0.589 0.317 8e-57
P37039678 NADPH--cytochrome P450 re no no 0.900 0.588 0.316 2e-56
>sp|Q6NPS8|ATR3_ARATH NADPH-dependent diflavin oxidoreductase ATR3 OS=Arabidopsis thaliana GN=ATR3 PE=1 SV=1 Back     alignment and function desciption
 Score =  608 bits (1567), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 287/421 (68%), Positives = 344/421 (81%), Gaps = 3/421 (0%)

Query: 25  LETARSMSAGKLSNYNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVL 84
           ++ AR MS GKL    +K  CFLKM +N+ LTK+ S KDV HFEF+FVS+ IEYEVGDV+
Sbjct: 204 IQRARGMSPGKLFKDKSKPDCFLKMTRNEVLTKAESTKDVRHFEFQFVSSTIEYEVGDVV 263

Query: 85  EILPSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKLRTFVELTMD 144
           E+LPSQ+ + VD FI+RC LDP++ ITV  +E +N      +  T++PIKL+TFVELTMD
Sbjct: 264 ELLPSQNSSVVDAFIERCGLDPESFITVGPRETENSSFS-EEMITQIPIKLKTFVELTMD 322

Query: 145 VTSASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTVLEVLEDFPSV 204
           VTSASPRRYFFE+MS++ATAEHEKERLQYFASPEGRDDLY YNQKERR++LEVLEDFPSV
Sbjct: 323 VTSASPRRYFFEIMSFYATAEHEKERLQYFASPEGRDDLYNYNQKERRSILEVLEDFPSV 382

Query: 205 QMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGL 264
           Q+P DWLVQLVPPLK RAFSISSSPLAHP  VHLTVS+VSW TPYKR R GLCS WLA L
Sbjct: 383 QIPFDWLVQLVPPLKPRAFSISSSPLAHPAAVHLTVSIVSWITPYKRTRKGLCSSWLASL 442

Query: 265 DPQQGIYIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF 324
            P+Q + IP WF KGSLP P  S+PLIL+GPGTGCAPFRGF+ ERA+Q+ S P AP++FF
Sbjct: 443 APEQEVNIPVWFHKGSLPAPSQSLPLILVGPGTGCAPFRGFIAERAVQAQSSPVAPVMFF 502

Query: 325 FGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQKVYVQHKMLEQSQRIW 383
           FGCRN+D DFLYR+ W SH+   G+ SE KGGGFY AFSR QP+KVYVQHK+ E S+R+W
Sbjct: 503 FGCRNKDTDFLYRDFWESHAREGGMLSEGKGGGFYTAFSRDQPKKVYVQHKIREMSKRVW 562

Query: 384 NLLLSKASIYVAGSATKMPSDVWSTFEEIVSKE-GEASRDSAANWLKALQRAGRYHVEAW 442
           +LL   A++YVAGS+TKMP DV S FE+IVS+E G  S++ A+ WLKAL++ GRY+VEAW
Sbjct: 563 DLLCDGAAVYVAGSSTKMPCDVMSAFEDIVSEETGGGSKEVASRWLKALEKTGRYNVEAW 622

Query: 443 S 443
           S
Sbjct: 623 S 623
Oxidoreductase that catalyzes the NADP-dependent reduction of cytochrome c, but not cytochrome P450 in vitro. Required for embryo development. May participate to the control of cell death through its interaction with the DRE2 homolog At5g18400.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 6EC: .EC: 9EC: 9EC: .EC: -
>sp|Q9UHB4|NDOR1_HUMAN NADPH-dependent diflavin oxidoreductase 1 OS=Homo sapiens GN=NDOR1 PE=1 SV=1 Back     alignment and function description
>sp|Q6PFP6|NDOR1_DANRE NADPH-dependent diflavin oxidoreductase 1 OS=Danio rerio GN=ndor1 PE=2 SV=1 Back     alignment and function description
>sp|A2AI05|NDOR1_MOUSE NADPH-dependent diflavin oxidoreductase 1 OS=Mus musculus GN=Ndor1 PE=2 SV=1 Back     alignment and function description
>sp|Q54JL0|NDOR1_DICDI NADPH-dependent diflavin oxidoreductase 1 OS=Dictyostelium discoideum GN=redC PE=2 SV=1 Back     alignment and function description
>sp|Q6NRG5|NDOR1_XENLA NADPH-dependent diflavin oxidoreductase 1 OS=Xenopus laevis GN=ndor1 PE=2 SV=1 Back     alignment and function description
>sp|Q1JPJ0|NDOR1_BOVIN NADPH-dependent diflavin oxidoreductase 1 (Fragment) OS=Bos taurus GN=NDOR1 PE=2 SV=1 Back     alignment and function description
>sp|Q3SYT8|NCPR_BOVIN NADPH--cytochrome P450 reductase OS=Bos taurus GN=POR PE=2 SV=3 Back     alignment and function description
>sp|P16435|NCPR_HUMAN NADPH--cytochrome P450 reductase OS=Homo sapiens GN=POR PE=1 SV=2 Back     alignment and function description
>sp|P37039|NCPR_CAVPO NADPH--cytochrome P450 reductase OS=Cavia porcellus GN=POR PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query443
449458325 629 PREDICTED: NADPH-dependent diflavin oxid 0.941 0.662 0.740 0.0
449519236 622 PREDICTED: LOW QUALITY PROTEIN: NADPH-de 0.941 0.670 0.738 0.0
225452009 631 PREDICTED: NADPH-dependent diflavin oxid 0.963 0.676 0.745 0.0
359488269 636 PREDICTED: NADPH-dependent diflavin oxid 0.963 0.671 0.736 0.0
356569080 617 PREDICTED: NADPH-dependent diflavin oxid 0.930 0.667 0.719 0.0
224077154 632 nadph-cytochrome P450 oxydoreductase [Po 0.961 0.674 0.732 1e-180
356569082 631 PREDICTED: NADPH-dependent diflavin oxid 0.957 0.671 0.686 1e-180
296087289 632 unnamed protein product [Vitis vinifera] 0.963 0.675 0.736 1e-180
255580311 621 NADPH fad oxidoreductase, putative [Rici 0.950 0.677 0.727 1e-178
90657547 630 hypothetical protein [Cleome spinosa] 0.959 0.674 0.682 1e-175
>gi|449458325|ref|XP_004146898.1| PREDICTED: NADPH-dependent diflavin oxidoreductase ATR3-like [Cucumis sativus] Back     alignment and taxonomy information
 Score =  662 bits (1707), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/420 (74%), Positives = 359/420 (85%), Gaps = 3/420 (0%)

Query: 25  LETARSMSAGKLSNYNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVL 84
           +E AR MS GK S+   K  CFLKMIKNQ L+K GSGKDV HFEFEFVS+ IEYEVGDVL
Sbjct: 212 IERARLMSPGKFSHGKKKPDCFLKMIKNQRLSKVGSGKDVRHFEFEFVSSVIEYEVGDVL 271

Query: 85  EILPSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKLRTFVELTMD 144
           E+LPSQ  AAV+ FIQRCNLDP++ ITV  +  +   P +       P+KL+TF+ELTMD
Sbjct: 272 EVLPSQSSAAVNAFIQRCNLDPESFITVSPRNRRKQDPILAAEMG--PVKLKTFIELTMD 329

Query: 145 VTSASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTVLEVLEDFPSV 204
           + SASPRRYFFEVMSY+ATA HEKERLQYFASPEGRDDLY+YNQKERR+VLEVLEDFPSV
Sbjct: 330 IASASPRRYFFEVMSYYATAPHEKERLQYFASPEGRDDLYQYNQKERRSVLEVLEDFPSV 389

Query: 205 QMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGL 264
           +MP DWLVQLVPPLKTR+FSISSS LAHPNQVHLTV+VVSWTTPYKRKR+GLCS WLAGL
Sbjct: 390 KMPFDWLVQLVPPLKTRSFSISSSALAHPNQVHLTVNVVSWTTPYKRKRSGLCSSWLAGL 449

Query: 265 DPQQGIYIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF 324
           DP+Q +++P WF KGSLP P PS+PLIL+GPGTGCAPFRGFVEER+I+++S   AP++FF
Sbjct: 450 DPEQSVHVPVWFHKGSLPAPSPSLPLILVGPGTGCAPFRGFVEERSIENTSMATAPVLFF 509

Query: 325 FGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQKVYVQHKMLEQSQRIW 383
           FGCRNED DFLYR+ WLSHS N GV SE KGGGFYVAFSR Q +KVYVQHKMLEQS++IW
Sbjct: 510 FGCRNEDNDFLYRDFWLSHSKNHGVLSEEKGGGFYVAFSRDQQRKVYVQHKMLEQSEKIW 569

Query: 384 NLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAWS 443
           NLL   A++YVAGS+TKMP+DVWSTFEEIVSKE +  R+SA  WL+AL++AG+YHVEAWS
Sbjct: 570 NLLREGAAVYVAGSSTKMPADVWSTFEEIVSKETQLPRESAVRWLRALEKAGKYHVEAWS 629

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|449519236|ref|XP_004166641.1| PREDICTED: LOW QUALITY PROTEIN: NADPH-dependent diflavin oxidoreductase ATR3-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|225452009|ref|XP_002280059.1| PREDICTED: NADPH-dependent diflavin oxidoreductase 1-like isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359488269|ref|XP_003633729.1| PREDICTED: NADPH-dependent diflavin oxidoreductase 1-like isoform 2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356569080|ref|XP_003552734.1| PREDICTED: NADPH-dependent diflavin oxidoreductase 1-like isoform 1 [Glycine max] Back     alignment and taxonomy information
>gi|224077154|ref|XP_002305157.1| nadph-cytochrome P450 oxydoreductase [Populus trichocarpa] gi|222848121|gb|EEE85668.1| nadph-cytochrome P450 oxydoreductase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356569082|ref|XP_003552735.1| PREDICTED: NADPH-dependent diflavin oxidoreductase 1-like isoform 2 [Glycine max] Back     alignment and taxonomy information
>gi|296087289|emb|CBI33663.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255580311|ref|XP_002530984.1| NADPH fad oxidoreductase, putative [Ricinus communis] gi|223529436|gb|EEF31396.1| NADPH fad oxidoreductase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|90657547|gb|ABD96847.1| hypothetical protein [Cleome spinosa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query443
TAIR|locus:2076547623 AT3G02280 [Arabidopsis thalian 0.943 0.670 0.681 1.8e-158
UNIPROTKB|E1BY65596 NDOR1 "Uncharacterized protein 0.857 0.637 0.395 3.7e-71
UNIPROTKB|Q9UHB4597 NDOR1 "NADPH-dependent diflavi 0.853 0.633 0.400 1.8e-69
ZFIN|ZDB-GENE-040426-1555595 ndor1 "NADPH dependent diflavi 0.855 0.636 0.384 8e-69
UNIPROTKB|E2R7E5703 NDOR1 "Uncharacterized protein 0.839 0.529 0.396 5.1e-67
UNIPROTKB|G3MXY0597 NDOR1 "NADPH-dependent diflavi 0.853 0.633 0.393 4.5e-66
UNIPROTKB|D3YTG6590 NDOR1 "NADPH-dependent diflavi 0.837 0.628 0.395 2.5e-65
UNIPROTKB|F1RVV9597 NDOR1 "Uncharacterized protein 0.855 0.634 0.386 5.2e-65
RGD|1308479598 Ndor1 "NADPH dependent diflavi 0.851 0.630 0.386 1.2e-63
UNIPROTKB|Q1JPJ0577 NDOR1 "NADPH-dependent diflavi 0.801 0.615 0.395 2.3e-62
TAIR|locus:2076547 AT3G02280 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1544 (548.6 bits), Expect = 1.8e-158, P = 1.8e-158
 Identities = 287/421 (68%), Positives = 344/421 (81%)

Query:    25 LETARSMSAGKLSNYNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVL 84
             ++ AR MS GKL    +K  CFLKM +N+ LTK+ S KDV HFEF+FVS+ IEYEVGDV+
Sbjct:   204 IQRARGMSPGKLFKDKSKPDCFLKMTRNEVLTKAESTKDVRHFEFQFVSSTIEYEVGDVV 263

Query:    85 EILPSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKLRTFVELTMD 144
             E+LPSQ+ + VD FI+RC LDP++ ITV  +E +N      +  T++PIKL+TFVELTMD
Sbjct:   264 ELLPSQNSSVVDAFIERCGLDPESFITVGPRETENSSFS-EEMITQIPIKLKTFVELTMD 322

Query:   145 VTSASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTVLEVLEDFPSV 204
             VTSASPRRYFFE+MS++ATAEHEKERLQYFASPEGRDDLY YNQKERR++LEVLEDFPSV
Sbjct:   323 VTSASPRRYFFEIMSFYATAEHEKERLQYFASPEGRDDLYNYNQKERRSILEVLEDFPSV 382

Query:   205 QMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGL 264
             Q+P DWLVQLVPPLK RAFSISSSPLAHP  VHLTVS+VSW TPYKR R GLCS WLA L
Sbjct:   383 QIPFDWLVQLVPPLKPRAFSISSSPLAHPAAVHLTVSIVSWITPYKRTRKGLCSSWLASL 442

Query:   265 DPQQGIYIPAWFQKGSLPRPPPSVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFF 324
              P+Q + IP WF KGSLP P  S+PLIL+GPGTGCAPFRGF+ ERA+Q+ S P AP++FF
Sbjct:   443 APEQEVNIPVWFHKGSLPAPSQSLPLILVGPGTGCAPFRGFIAERAVQAQSSPVAPVMFF 502

Query:   325 FGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQKVYVQHKMLEQSQRIW 383
             FGCRN+D DFLYR+ W SH+   G+ SE KGGGFY AFSR QP+KVYVQHK+ E S+R+W
Sbjct:   503 FGCRNKDTDFLYRDFWESHAREGGMLSEGKGGGFYTAFSRDQPKKVYVQHKIREMSKRVW 562

Query:   384 NLLLSKASIYVAGSATKMPSDVWSTFEEIVSKE-GEASRDSAANWLKALQRAGRYHVEAW 442
             +LL   A++YVAGS+TKMP DV S FE+IVS+E G  S++ A+ WLKAL++ GRY+VEAW
Sbjct:   563 DLLCDGAAVYVAGSSTKMPCDVMSAFEDIVSEETGGGSKEVASRWLKALEKTGRYNVEAW 622

Query:   443 S 443
             S
Sbjct:   623 S 623
GO:0005506 "iron ion binding" evidence=IEA
GO:0005634 "nucleus" evidence=ISM;IDA
GO:0010181 "FMN binding" evidence=IEA
GO:0016491 "oxidoreductase activity" evidence=IEA;ISS
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0005515 "protein binding" evidence=IPI
GO:0005737 "cytoplasm" evidence=IDA
GO:0009793 "embryo development ending in seed dormancy" evidence=IMP
GO:0016651 "oxidoreductase activity, acting on NAD(P)H" evidence=IDA
GO:0000724 "double-strand break repair via homologous recombination" evidence=RCA
GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA
GO:0009640 "photomorphogenesis" evidence=RCA
GO:0010212 "response to ionizing radiation" evidence=RCA
GO:0010388 "cullin deneddylation" evidence=RCA
GO:0016567 "protein ubiquitination" evidence=RCA
GO:0016571 "histone methylation" evidence=RCA
GO:0016579 "protein deubiquitination" evidence=RCA
GO:0043687 "post-translational protein modification" evidence=RCA
GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA
UNIPROTKB|E1BY65 NDOR1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q9UHB4 NDOR1 "NADPH-dependent diflavin oxidoreductase 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-1555 ndor1 "NADPH dependent diflavin oxidoreductase 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E2R7E5 NDOR1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|G3MXY0 NDOR1 "NADPH-dependent diflavin oxidoreductase 1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|D3YTG6 NDOR1 "NADPH-dependent diflavin oxidoreductase 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1RVV9 NDOR1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
RGD|1308479 Ndor1 "NADPH dependent diflavin oxidoreductase 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q1JPJ0 NDOR1 "NADPH-dependent diflavin oxidoreductase 1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q6NPS8ATR3_ARATH1, ., 6, ., 9, 9, ., -0.68170.94350.6709yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query443
cd06207382 cd06207, CyPoR_like, NADPH cytochrome p450 reducta 1e-153
COG0369587 COG0369, CysJ, Sulfite reductase, alpha subunit (f 1e-102
cd06204416 cd06204, CYPOR, NADPH cytochrome p450 reductase (C 6e-99
cd06199360 cd06199, SiR, Cytochrome p450- like alpha subunits 5e-90
cd06206384 cd06206, bifunctional_CYPOR, These bifunctional pr 4e-75
cd06203398 cd06203, methionine_synthase_red, Human methionine 1e-74
cd06202406 cd06202, Nitric_oxide_synthase, The ferredoxin-red 6e-72
PRK06214530 PRK06214, PRK06214, sulfite reductase; Provisional 6e-68
cd06182267 cd06182, CYPOR_like, NADPH cytochrome p450 reducta 7e-66
TIGR01931597 TIGR01931, cysJ, sulfite reductase [NADPH] flavopr 1e-63
pfam00667217 pfam00667, FAD_binding_1, FAD binding domain 1e-55
PRK10953600 PRK10953, cysJ, sulfite reductase subunit alpha; P 4e-42
cd06200245 cd06200, SiR_like1, Cytochrome p450- like alpha su 4e-26
cd06208286 cd06208, CYPOR_like_FNR, These ferredoxin reductas 9e-26
cd00322223 cd00322, FNR_like, Ferredoxin reductase (FNR), an 7e-20
cd06201289 cd06201, SiR_like2, Cytochrome p450- like alpha su 3e-19
pfam00175106 pfam00175, NAD_binding_1, Oxidoreductase NAD-bindi 3e-16
PLN03116307 PLN03116, PLN03116, ferredoxin--NADP+ reductase; P 6e-16
PLN03115367 PLN03115, PLN03115, ferredoxin--NADP(+) reductase; 2e-10
TIGR03224411 TIGR03224, benzo_boxA, benzoyl-CoA oxygenase/reduc 4e-10
cd06217235 cd06217, FNR_iron_sulfur_binding_3, Iron-sulfur bi 2e-08
cd06188283 cd06188, NADH_quinone_reductase, Na+-translocating 1e-07
COG0543252 COG0543, UbiB, 2-polyprenylphenol hydroxylase and 3e-07
cd06187224 cd06187, O2ase_reductase_like, The oxygenase reduc 7e-06
cd06194222 cd06194, FNR_N-term_Iron_sulfur_binding, Iron-sulf 1e-05
cd06216243 cd06216, FNR_iron_sulfur_binding_2, Iron-sulfur bi 2e-05
COG1018266 COG1018, Hmp, Flavodoxin reductases (ferredoxin-NA 4e-05
cd06212232 cd06212, monooxygenase_like, The oxygenase reducta 4e-04
cd06221253 cd06221, sulfite_reductase_like, Anaerobic sulfite 9e-04
cd06189224 cd06189, flavin_oxioreductase, NAD(P)H dependent f 0.001
cd06215231 cd06215, FNR_iron_sulfur_binding_1, Iron-sulfur bi 0.002
cd06198216 cd06198, FNR_like_3, NAD(P) binding domain of ferr 0.002
cd06211238 cd06211, phenol_2-monooxygenase_like, Phenol 2-mon 0.004
>gnl|CDD|99803 cd06207, CyPoR_like, NADPH cytochrome p450 reductase (CYPOR) serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases Back     alignment and domain information 
 Score =  439 bits (1131), Expect = e-153
 Identities = 151/410 (36%), Positives = 210/410 (51%), Gaps = 43/410 (10%)

Query: 48  KMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQRCNLDPD 107
           K+ +N+ LT +   +   H EF+   + + YE GD L I P    A VD F+ R  LD D
Sbjct: 1   KVTENKRLTPADYDRSTRHIEFDLGGSGLSYETGDNLGIYPENSDALVDEFLARLGLDGD 60

Query: 108 ALITVQHKEMKNYLPDIHKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHE 167
            ++ V                                    S R+   + +  F     +
Sbjct: 61  DVVRV--------------------EPNEQQRGKPPFPEPISVRQLLKKFLDIFGKPTKK 100

Query: 168 KERLQYFASPEG--RDDLYKYNQKERRTV---------LEVLEDFPSVQMPIDWLVQLVP 216
             +L    + +   ++DLYK   +E RT          LEVL+DFPSV+  ++ L++L P
Sbjct: 101 FLKLLSQLATDEEEKEDLYKLASREGRTEYKRYEKYTYLEVLKDFPSVRPTLEQLLELCP 160

Query: 217 PLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIPAWF 276
            +K R +SISSSPL +PN+VHL VS+VSW TP  R R GLCS +LAGL   Q   +  + 
Sbjct: 161 LIKPRYYSISSSPLKNPNEVHLLVSLVSWKTPSGRSRYGLCSSYLAGLKVGQ--RVTVFI 218

Query: 277 QKGSLPRPP-PSVPLILIGPGTGCAPFRGFVEERAIQSSSGPA-APIIFFFGCRNED-DF 333
           +K S   P  P  P+I++GPGTG APFR F++ERA   + GP   P++ +FGCR+ED D+
Sbjct: 219 KKSSFKLPKDPKKPIIMVGPGTGLAPFRAFLQERAALLAQGPEIGPVLLYFGCRHEDKDY 278

Query: 334 LYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQKVYVQHKMLEQSQRIWNLLLSKA-SI 392
           LY+E    +  +              AFSR QP+KVYVQ  + E S  ++ LL   A  I
Sbjct: 279 LYKEELEEYEKSG------VLTTLGTAFSRDQPKKVYVQDLIRENSDLVYQLLEEGAGVI 332

Query: 393 YVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAW 442
           YV GS  KMP DV   FEEI+ K G    + A   ++ L+  GRY VEAW
Sbjct: 333 YVCGSTWKMPPDVQEAFEEILKKHGGGDEELAEKKIEELEERGRYVVEAW 382

CYPOR transfers two electrons from NADPH to the heme of cytochrome p450 via FAD and FMN. Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin. Isoforms of these flavoproteins (i.e. having a non-covalently bound FAD as a prosthetic group) are present in chloroplasts, mitochondria, and bacteria in which they participate in a wide variety of redox metabolic pathways. The C-terminal domain contains most of the NADP(H) binding residues and the N-terminal domain interacts non-covalently with the isoalloxazine rings of the flavin molecule which lies largely in a large gap betweed the two domains. Ferredoxin-NADP+ reductase first accepts one electron from reduced ferredoxin to form a flavin semiquinone intermediate. The enzyme then accepts a second electron to form FADH2 which then transfers two electrons and a proton to NADP+ to form NADPH. Length = 382
>gnl|CDD|223446 COG0369, CysJ, Sulfite reductase, alpha subunit (flavoprotein) [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|99801 cd06204, CYPOR, NADPH cytochrome p450 reductase (CYPOR) serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases Back     alignment and domain information
>gnl|CDD|99796 cd06199, SiR, Cytochrome p450- like alpha subunits of E Back     alignment and domain information
>gnl|CDD|99802 cd06206, bifunctional_CYPOR, These bifunctional proteins fuse N-terminal cytochrome p450 with a cytochrome p450 reductase (CYPOR) Back     alignment and domain information
>gnl|CDD|99800 cd06203, methionine_synthase_red, Human methionine synthase reductase (MSR) restores methionine sythase which is responsible for the regeneration of methionine from homocysteine, as well as the coversion of methyltetrahydrofolate to tetrahydrofolate Back     alignment and domain information
>gnl|CDD|99799 cd06202, Nitric_oxide_synthase, The ferredoxin-reductase (FNR) like C-terminal domain of the nitric oxide synthase (NOS) fuses with a heme-containing N-terminal oxidase domain Back     alignment and domain information
>gnl|CDD|235745 PRK06214, PRK06214, sulfite reductase; Provisional Back     alignment and domain information
>gnl|CDD|99779 cd06182, CYPOR_like, NADPH cytochrome p450 reductase (CYPOR) serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases Back     alignment and domain information
>gnl|CDD|233643 TIGR01931, cysJ, sulfite reductase [NADPH] flavoprotein, alpha-component Back     alignment and domain information
>gnl|CDD|216051 pfam00667, FAD_binding_1, FAD binding domain Back     alignment and domain information
>gnl|CDD|182862 PRK10953, cysJ, sulfite reductase subunit alpha; Provisional Back     alignment and domain information
>gnl|CDD|99797 cd06200, SiR_like1, Cytochrome p450- like alpha subunits of E Back     alignment and domain information
>gnl|CDD|99804 cd06208, CYPOR_like_FNR, These ferredoxin reductases are related to the NADPH cytochrome p450 reductases (CYPOR), but lack the FAD-binding region connecting sub-domain Back     alignment and domain information
>gnl|CDD|99778 cd00322, FNR_like, Ferredoxin reductase (FNR), an FAD and NAD(P) binding protein, was intially identified as a chloroplast reductase activity, catalyzing the electron transfer from reduced iron-sulfur protein ferredoxin to NADP+ as the final step in the electron transport mechanism of photosystem I Back     alignment and domain information
>gnl|CDD|99798 cd06201, SiR_like2, Cytochrome p450- like alpha subunits of E Back     alignment and domain information
>gnl|CDD|215769 pfam00175, NAD_binding_1, Oxidoreductase NAD-binding domain Back     alignment and domain information
>gnl|CDD|215586 PLN03116, PLN03116, ferredoxin--NADP+ reductase; Provisional Back     alignment and domain information
>gnl|CDD|215585 PLN03115, PLN03115, ferredoxin--NADP(+) reductase; Provisional Back     alignment and domain information
>gnl|CDD|132268 TIGR03224, benzo_boxA, benzoyl-CoA oxygenase/reductase, BoxA protein Back     alignment and domain information
>gnl|CDD|99813 cd06217, FNR_iron_sulfur_binding_3, Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain Back     alignment and domain information
>gnl|CDD|99785 cd06188, NADH_quinone_reductase, Na+-translocating NADH:quinone oxidoreductase (Na+-NQR) FAD/NADH binding domain Back     alignment and domain information
>gnl|CDD|223617 COG0543, UbiB, 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases [Coenzyme metabolism / Energy production and conversion] Back     alignment and domain information
>gnl|CDD|99784 cd06187, O2ase_reductase_like, The oxygenase reductase FAD/NADH binding domain acts as part of the multi-component bacterial oxygenases which oxidize hydrocarbons using oxygen as the oxidant Back     alignment and domain information
>gnl|CDD|99791 cd06194, FNR_N-term_Iron_sulfur_binding, Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an N-terminal Iron-Sulfur binding cluster domain Back     alignment and domain information
>gnl|CDD|99812 cd06216, FNR_iron_sulfur_binding_2, Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain Back     alignment and domain information
>gnl|CDD|223949 COG1018, Hmp, Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|99808 cd06212, monooxygenase_like, The oxygenase reductase FAD/NADH binding domain acts as part of the multi-component bacterial oxygenases which oxidize hydrocarbons Back     alignment and domain information
>gnl|CDD|99817 cd06221, sulfite_reductase_like, Anaerobic sulfite reductase contains an FAD and NADPH binding module with structural similarity to ferredoxin reductase and sequence similarity to dihydroorotate dehydrogenases Back     alignment and domain information
>gnl|CDD|99786 cd06189, flavin_oxioreductase, NAD(P)H dependent flavin oxidoreductases use flavin as a substrate in mediating electron transfer from iron complexes or iron proteins Back     alignment and domain information
>gnl|CDD|99811 cd06215, FNR_iron_sulfur_binding_1, Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain Back     alignment and domain information
>gnl|CDD|99795 cd06198, FNR_like_3, NAD(P) binding domain of ferredoxin reductase-like proteins catalyze electron transfer between an NAD(P)-binding sub-domain of the alpha/beta class and a discrete (usually N-terminal) domain, which varies in orientation with respect to the NAD(P) binding domain Back     alignment and domain information
>gnl|CDD|99807 cd06211, phenol_2-monooxygenase_like, Phenol 2-monooxygenase (phenol hydroxylase) is a flavoprotein monooxygenase, able to use molecular oxygen as a substrate in the microbial degredation of phenol Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 443
KOG1159574 consensus NADP-dependent flavoprotein reductase [E 100.0
cd06204416 CYPOR NADPH cytochrome p450 reductase (CYPOR) serv 100.0
cd06203398 methionine_synthase_red Human methionine synthase 100.0
cd06202406 Nitric_oxide_synthase The ferredoxin-reductase (FN 100.0
cd06207382 CyPoR_like NADPH cytochrome p450 reductase (CYPOR) 100.0
KOG1158645 consensus NADP/FAD dependent oxidoreductase [Energ 100.0
COG0369587 CysJ Sulfite reductase, alpha subunit (flavoprotei 100.0
cd06206384 bifunctional_CYPOR These bifunctional proteins fus 100.0
PRK10953600 cysJ sulfite reductase subunit alpha; Provisional 100.0
cd06199360 SiR Cytochrome p450- like alpha subunits of E. col 100.0
TIGR01931597 cysJ sulfite reductase [NADPH] flavoprotein, alpha 100.0
PRK06214530 sulfite reductase; Provisional 100.0
PF00667219 FAD_binding_1: FAD binding domain; InterPro: IPR00 100.0
PLN03115367 ferredoxin--NADP(+) reductase; Provisional 100.0
cd06182267 CYPOR_like NADPH cytochrome p450 reductase (CYPOR) 100.0
PLN03116307 ferredoxin--NADP+ reductase; Provisional 100.0
TIGR03224411 benzo_boxA benzoyl-CoA oxygenase/reductase, BoxA p 100.0
cd06208286 CYPOR_like_FNR These ferredoxin reductases are rel 100.0
cd06200245 SiR_like1 Cytochrome p450- like alpha subunits of 100.0
cd06201289 SiR_like2 Cytochrome p450- like alpha subunits of 100.0
cd00322223 FNR_like Ferredoxin reductase (FNR), an FAD and NA 99.95
PRK10926248 ferredoxin-NADP reductase; Provisional 99.95
cd06189224 flavin_oxioreductase NAD(P)H dependent flavin oxid 99.95
cd06188283 NADH_quinone_reductase Na+-translocating NADH:quin 99.95
cd06211238 phenol_2-monooxygenase_like Phenol 2-monooxygenase 99.94
cd06209228 BenDO_FAD_NAD Benzoate dioxygenase reductase (BenD 99.94
PRK08051232 fre FMN reductase; Validated 99.94
cd06190232 T4MO_e_transfer_like Toluene-4-monoxygenase electr 99.94
cd06195241 FNR1 Ferredoxin-NADP+ (oxido)reductase is an FAD-c 99.94
PRK07609339 CDP-6-deoxy-delta-3,4-glucoseen reductase; Validat 99.94
PRK11872340 antC anthranilate dioxygenase reductase; Provision 99.94
PRK05464409 Na(+)-translocating NADH-quinone reductase subunit 99.94
PRK13289399 bifunctional nitric oxide dioxygenase/dihydropteri 99.94
TIGR01941405 nqrF NADH:ubiquinone oxidoreductase, Na(+)-translo 99.94
cd06187224 O2ase_reductase_like The oxygenase reductase FAD/N 99.94
cd06210236 MMO_FAD_NAD_binding Methane monooxygenase (MMO) re 99.94
cd06212232 monooxygenase_like The oxygenase reductase FAD/NAD 99.94
PRK10684332 HCP oxidoreductase, NADH-dependent; Provisional 99.94
cd06191231 FNR_iron_sulfur_binding Iron-sulfur binding Ferred 99.94
cd06213227 oxygenase_e_transfer_subunit The oxygenase reducta 99.93
PRK08345289 cytochrome-c3 hydrogenase subunit gamma; Provision 99.93
cd06194222 FNR_N-term_Iron_sulfur_binding Iron-sulfur binding 99.93
cd06184247 flavohem_like_fad_nad_binding FAD_NAD(P)H binding 99.93
PRK05713312 hypothetical protein; Provisional 99.93
cd06215231 FNR_iron_sulfur_binding_1 Iron-sulfur binding ferr 99.93
cd06196218 FNR_like_1 Ferredoxin reductase-like proteins cata 99.92
cd06216243 FNR_iron_sulfur_binding_2 Iron-sulfur binding ferr 99.92
cd06221253 sulfite_reductase_like Anaerobic sulfite reductase 99.92
cd06217235 FNR_iron_sulfur_binding_3 Iron-sulfur binding ferr 99.92
TIGR02160352 PA_CoA_Oxy5 phenylacetate-CoA oxygenase/reductase, 99.91
cd06198216 FNR_like_3 NAD(P) binding domain of ferredoxin red 99.91
cd06214241 PA_degradation_oxidoreductase_like NAD(P) binding 99.91
cd06218246 DHOD_e_trans FAD/NAD binding domain in the electro 99.91
cd06183234 cyt_b5_reduct_like Cytochrome b5 reductase catalyz 99.91
PRK08221263 anaerobic sulfite reductase subunit B; Provisional 99.9
cd06185211 PDR_like Phthalate dioxygenase reductase (PDR) is 99.9
PTZ00319300 NADH-cytochrome B5 reductase; Provisional 99.9
TIGR02911261 sulfite_red_B sulfite reductase, subunit B. Member 99.9
PTZ00274325 cytochrome b5 reductase; Provisional 99.9
COG1018266 Hmp Flavodoxin reductases (ferredoxin-NADPH reduct 99.89
COG2871410 NqrF Na+-transporting NADH:ubiquinone oxidoreducta 99.89
PRK00054250 dihydroorotate dehydrogenase electron transfer sub 99.89
cd06220233 DHOD_e_trans_like2 FAD/NAD binding domain in the e 99.88
cd06219248 DHOD_e_trans_like1 FAD/NAD binding domain in the e 99.88
PRK06222281 ferredoxin-NADP(+) reductase subunit alpha; Review 99.88
COG0543252 UbiB 2-polyprenylphenol hydroxylase and related fl 99.88
cd06192243 DHOD_e_trans_like FAD/NAD binding domain (electron 99.87
cd06197220 FNR_like_2 FAD/NAD(P) binding domain of ferredoxin 99.86
PLN02252888 nitrate reductase [NADPH] 99.85
KOG0534286 consensus NADH-cytochrome b-5 reductase [Coenzyme 99.84
PRK05802320 hypothetical protein; Provisional 99.84
PTZ003061167 NADH-dependent fumarate reductase; Provisional 99.83
COG4097438 Predicted ferric reductase [Inorganic ion transpor 99.82
PRK12778 752 putative bifunctional 2-polyprenylphenol hydroxyla 99.8
cd06193235 siderophore_interacting Siderophore interacting pr 99.78
cd06186210 NOX_Duox_like_FAD_NADP NADPH oxidase (NOX) catalyz 99.77
PF00175109 NAD_binding_1: Oxidoreductase NAD-binding domain ; 99.77
PRK12779944 putative bifunctional glutamate synthase subunit b 99.75
PRK12775 1006 putative trifunctional 2-polyprenylphenol hydroxyl 99.71
PLN02292 702 ferric-chelate reductase 99.55
PLN02844 722 oxidoreductase/ferric-chelate reductase 99.54
PLN02631 699 ferric-chelate reductase 99.54
KOG3378385 consensus Globins and related hemoproteins [Energy 99.17
PF08030156 NAD_binding_6: Ferric reductase NAD binding domain 98.63
KOG0039646 consensus Ferric reductase, NADH/NADPH oxidase and 98.35
PF0097099 FAD_binding_6: Oxidoreductase FAD-binding domain; 98.33
PRK065671028 putative bifunctional glutamate synthase subunit b 98.3
COG2375265 ViuB Siderophore-interacting protein [Inorganic io 97.6
PF08021117 FAD_binding_9: Siderophore-interacting FAD-binding 91.51
PF08022105 FAD_binding_8: FAD-binding domain; InterPro: IPR01 91.06
>KOG1159 consensus NADP-dependent flavoprotein reductase [Energy production and conversion] Back     alignment and domain information 
Probab=100.00  E-value=1.7e-83  Score=640.28  Aligned_cols=372  Identities=47%  Similarity=0.785  Sum_probs=345.3

Q ss_pred             eEEEeeeecCCCCCCcEEEEEEEecCCCcccCCCCEEEEccCCCHHHHHHHHHHcCCCCCceEEEeeCCccCCCCccccC
Q 013425           48 KMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLPDIHKN  127 (443)
Q Consensus        48 ~v~~~~~Lt~~~~~~~v~~i~l~~~~~~~~y~~GD~l~I~p~N~~~~V~~~l~~l~l~~~~~v~i~~~~~~~~~~~~~~~  127 (443)
                      ++++|++||+.+++++|+|++|+++++.+.|+|||++.|+|.|+.+.|++|++.+||++++...+.+......-|   .+
T Consensus       200 k~~~N~rlT~~~HfQDVR~~~F~i~~s~~~~epGDvl~l~P~N~de~V~~Fie~~gl~~~~~~~l~~~s~~~~~~---~~  276 (574)
T KOG1159|consen  200 KLVENRRLTSADHFQDVRLFEFDIPDSYEEFEPGDVLSLLPSNSDETVQRFIEYLGLDEDQLKPLKISSNDRSSP---LP  276 (574)
T ss_pred             chhcceeecCcchhheeeEEEEecCCccccccCCCEEEEecCCchHHHHHHHHHcCCChhhccccccccCccccc---cc
Confidence            999999999999999999999999988999999999999999999999999999999998654443322211111   12


Q ss_pred             CCCCcchHHHHHHHccccCCCCCCHHHHHHHHHhccChhHHHHHHhhcCCCChHHHHHHHHhcCCCHHHHHhhCCCCCCC
Q 013425          128 TTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASPEGRDDLYKYNQKERRTVLEVLEDFPSVQMP  207 (443)
Q Consensus       128 ~~~~~~tl~~ll~~~~Dl~~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~~~~~~~~~~~~~~~~l~d~L~~f~s~~~p  207 (443)
                      .++.|+|++.++++|+||++ +|+++||..|++|++++.||+||+++++++|.++|++|+.++++|++|+|++|+|+++|
T Consensus       277 ~~~~p~sl~~~lk~~~D~~S-vPrrsFFe~l~~~s~~~~EkEkL~efas~qg~ddl~dY~nRpRRtilEvLeDF~sv~lp  355 (574)
T KOG1159|consen  277 LLPNPLSLLNLLKYVLDFNS-VPRRSFFEMLAHFSTDEMEKEKLQEFASAQGIDDLYDYVNRPRRTILEVLEDFRSVKLP  355 (574)
T ss_pred             ccCCchhHHHHHHHhccccc-CcchHHHHHHHHHccChHHHHHHHHhccccchHHHHHHhcchhhhHHHHHHhchhccCC
Confidence            46899999999999999999 99999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCcceeecCCCCCCCCCeEEEEEEEEEecCCCCcccCCcccccccCCCCCCCcEEEEEeecCCCCCC-CC
Q 013425          208 IDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGIYIPAWFQKGSLPRP-PP  286 (443)
Q Consensus       208 ~~~ll~~lp~~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~~~G~~v~i~~~~g~F~lp-~~  286 (443)
                      .++|++.+|.++||+|||||+|..+  .++|+|++|+|+|..++.|.|+||+||++|++  |+.|.+.+.+|.+.+| +.
T Consensus       356 ~~yl~d~~P~IrPR~fSIas~~~~~--~leL~VAiV~ykT~l~~pRrGlCS~wl~sL~~--g~~i~~~v~~g~l~~p~~~  431 (574)
T KOG1159|consen  356 IDYLLDLLPVIRPRAFSIASSPGAH--HLELLVAIVEYKTILKEPRRGLCSNWLASLKP--GDEIPIKVRPGTLYFPSDL  431 (574)
T ss_pred             HHHHHHhccccccceeeeccCCCCC--ceeEEEEEEEEeeeccccccchhHHHHhhcCC--CCeEEEEEecCccccCCCC
Confidence            9999999999999999999999764  49999999999999999999999999999999  9999999999999999 77


Q ss_pred             CCCeEEEeCCccchhHHHHHHHHHHhcCCCCCCCEEEEEeecCCc-cccCHHHHHHhhhcCCCccccCCCeEEEEEccCC
Q 013425          287 SVPLILIGPGTGCAPFRGFVEERAIQSSSGPAAPIIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQ  365 (443)
Q Consensus       287 ~~piImIa~GTGIAPfrs~lq~~~~~~~~~~~~~~~L~~G~R~~~-d~ly~~el~~~~~~~g~l~~~~~~~~~~a~Sr~~  365 (443)
                      ++|+||||+|||||||||++++|..++.    .+..||||||+++ ||+|.+||.+..+.          ..+.|||||+
T Consensus       432 ~~PlImVGPGTGvAPfRa~i~er~~q~~----~~~~lFfGCR~K~~Df~y~~eW~~~~~~----------~~~~AFSRDq  497 (574)
T KOG1159|consen  432 NKPLIMVGPGTGVAPFRALIQERIYQGD----KENVLFFGCRNKDKDFLYEDEWTELNKR----------AFHTAFSRDQ  497 (574)
T ss_pred             CCCeEEEcCCCCcccHHHHHHHHHhhcc----CCceEEEecccCCccccccchhhhhhcc----------hhhhhccccc
Confidence            9999999999999999999999998654    4669999999999 99999999988765          4456999999


Q ss_pred             CCcccchhhHHHcHHHHHHhhcC-CCEEEEeCCCCchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCEEEeec
Q 013425          366 PQKVYVQHKMLEQSQRIWNLLLS-KASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEAW  442 (443)
Q Consensus       366 ~~k~yVqd~l~~~~~~l~~~l~~-~~~iyvCG~~~~M~~~V~~~L~~i~~~~~~~~~~~a~~~l~~l~~~~Ry~~dvW  442 (443)
                      ++|.||||.|++.++.+|+++.+ ||.|||||+++.|+++|.++|.+|+.++++.++|.|. |++.|++.+||+.|+|
T Consensus       498 e~kvYVQh~i~e~g~~v~~Ll~~~gA~~fvaGsS~~MP~~V~~al~eI~~~e~g~~~e~a~-~l~~lekt~ryq~ETW  574 (574)
T KOG1159|consen  498 EQKVYVQHKIRENGEEVWDLLDNLGAYFFVAGSSGKMPKDVKEALIEIVGKEGGFSKEVAS-YLKALEKTRRYQQETW  574 (574)
T ss_pred             ccceeHHHHHHHhhHHHHHHHhccCCEEEEecCCCCCcHHHHHHHHHHhhhhcCCChHHHH-HHHHHHHhccccccCC
Confidence            99999999999999999999986 9999999999999999999999999999999777777 9999999999999999

>cd06204 CYPOR NADPH cytochrome p450 reductase (CYPOR) serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases Back     alignment and domain information
>cd06203 methionine_synthase_red Human methionine synthase reductase (MSR) restores methionine sythase which is responsible for the regeneration of methionine from homocysteine, as well as the coversion of methyltetrahydrofolate to tetrahydrofolate Back     alignment and domain information
>cd06202 Nitric_oxide_synthase The ferredoxin-reductase (FNR) like C-terminal domain of the nitric oxide synthase (NOS) fuses with a heme-containing N-terminal oxidase domain Back     alignment and domain information
>cd06207 CyPoR_like NADPH cytochrome p450 reductase (CYPOR) serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases Back     alignment and domain information
>KOG1158 consensus NADP/FAD dependent oxidoreductase [Energy production and conversion] Back     alignment and domain information
>COG0369 CysJ Sulfite reductase, alpha subunit (flavoprotein) [Inorganic ion transport and metabolism] Back     alignment and domain information
>cd06206 bifunctional_CYPOR These bifunctional proteins fuse N-terminal cytochrome p450 with a cytochrome p450 reductase (CYPOR) Back     alignment and domain information
>PRK10953 cysJ sulfite reductase subunit alpha; Provisional Back     alignment and domain information
>cd06199 SiR Cytochrome p450- like alpha subunits of E Back     alignment and domain information
>TIGR01931 cysJ sulfite reductase [NADPH] flavoprotein, alpha-component Back     alignment and domain information
>PRK06214 sulfite reductase; Provisional Back     alignment and domain information
>PF00667 FAD_binding_1: FAD binding domain; InterPro: IPR003097 This domain is found in sulphite reductase, NADPH cytochrome P450 reductase, nitric oxide synthase and methionine synthase reductase Back     alignment and domain information
>PLN03115 ferredoxin--NADP(+) reductase; Provisional Back     alignment and domain information
>cd06182 CYPOR_like NADPH cytochrome p450 reductase (CYPOR) serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases Back     alignment and domain information
>PLN03116 ferredoxin--NADP+ reductase; Provisional Back     alignment and domain information
>TIGR03224 benzo_boxA benzoyl-CoA oxygenase/reductase, BoxA protein Back     alignment and domain information
>cd06208 CYPOR_like_FNR These ferredoxin reductases are related to the NADPH cytochrome p450 reductases (CYPOR), but lack the FAD-binding region connecting sub-domain Back     alignment and domain information
>cd06200 SiR_like1 Cytochrome p450- like alpha subunits of E Back     alignment and domain information
>cd06201 SiR_like2 Cytochrome p450- like alpha subunits of E Back     alignment and domain information
>cd00322 FNR_like Ferredoxin reductase (FNR), an FAD and NAD(P) binding protein, was intially identified as a chloroplast reductase activity, catalyzing the electron transfer from reduced iron-sulfur protein ferredoxin to NADP+ as the final step in the electron transport mechanism of photosystem I Back     alignment and domain information
>PRK10926 ferredoxin-NADP reductase; Provisional Back     alignment and domain information
>cd06189 flavin_oxioreductase NAD(P)H dependent flavin oxidoreductases use flavin as a substrate in mediating electron transfer from iron complexes or iron proteins Back     alignment and domain information
>cd06188 NADH_quinone_reductase Na+-translocating NADH:quinone oxidoreductase (Na+-NQR) FAD/NADH binding domain Back     alignment and domain information
>cd06211 phenol_2-monooxygenase_like Phenol 2-monooxygenase (phenol hydroxylase) is a flavoprotein monooxygenase, able to use molecular oxygen as a substrate in the microbial degredation of phenol Back     alignment and domain information
>cd06209 BenDO_FAD_NAD Benzoate dioxygenase reductase (BenDO) FAD/NAD binding domain Back     alignment and domain information
>PRK08051 fre FMN reductase; Validated Back     alignment and domain information
>cd06190 T4MO_e_transfer_like Toluene-4-monoxygenase electron transfer component of Pseudomonas mendocina hydroxylates toluene and forms p-cresol as part of a three component toluene-4-monoxygenase system Back     alignment and domain information
>cd06195 FNR1 Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin Back     alignment and domain information
>PRK07609 CDP-6-deoxy-delta-3,4-glucoseen reductase; Validated Back     alignment and domain information
>PRK11872 antC anthranilate dioxygenase reductase; Provisional Back     alignment and domain information
>PRK05464 Na(+)-translocating NADH-quinone reductase subunit F; Provisional Back     alignment and domain information
>PRK13289 bifunctional nitric oxide dioxygenase/dihydropteridine reductase 2; Provisional Back     alignment and domain information
>TIGR01941 nqrF NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit Back     alignment and domain information
>cd06187 O2ase_reductase_like The oxygenase reductase FAD/NADH binding domain acts as part of the multi-component bacterial oxygenases which oxidize hydrocarbons using oxygen as the oxidant Back     alignment and domain information
>cd06210 MMO_FAD_NAD_binding Methane monooxygenase (MMO) reductase of methanotrophs catalyzes the NADH-dependent hydroxylation of methane to methanol Back     alignment and domain information
>cd06212 monooxygenase_like The oxygenase reductase FAD/NADH binding domain acts as part of the multi-component bacterial oxygenases which oxidize hydrocarbons Back     alignment and domain information
>PRK10684 HCP oxidoreductase, NADH-dependent; Provisional Back     alignment and domain information
>cd06191 FNR_iron_sulfur_binding Iron-sulfur binding Ferredoxin Reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with a C-terminal iron-sulfur binding cluster domain Back     alignment and domain information
>cd06213 oxygenase_e_transfer_subunit The oxygenase reductase FAD/NADH binding domain acts as part of the multi-component bacterial oxygenases which oxidize hydrocarbons Back     alignment and domain information
>PRK08345 cytochrome-c3 hydrogenase subunit gamma; Provisional Back     alignment and domain information
>cd06194 FNR_N-term_Iron_sulfur_binding Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an N-terminal Iron-Sulfur binding cluster domain Back     alignment and domain information
>cd06184 flavohem_like_fad_nad_binding FAD_NAD(P)H binding domain of flavohemoglobin Back     alignment and domain information
>PRK05713 hypothetical protein; Provisional Back     alignment and domain information
>cd06215 FNR_iron_sulfur_binding_1 Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain Back     alignment and domain information
>cd06196 FNR_like_1 Ferredoxin reductase-like proteins catalyze electron transfer between an NAD(P)-binding domain of the alpha/beta class and a discrete (usually N-terminal) domain which varies in orientation with respect to the NAD(P) binding domain Back     alignment and domain information
>cd06216 FNR_iron_sulfur_binding_2 Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain Back     alignment and domain information
>cd06221 sulfite_reductase_like Anaerobic sulfite reductase contains an FAD and NADPH binding module with structural similarity to ferredoxin reductase and sequence similarity to dihydroorotate dehydrogenases Back     alignment and domain information
>cd06217 FNR_iron_sulfur_binding_3 Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain Back     alignment and domain information
>TIGR02160 PA_CoA_Oxy5 phenylacetate-CoA oxygenase/reductase, PaaK subunit Back     alignment and domain information
>cd06198 FNR_like_3 NAD(P) binding domain of ferredoxin reductase-like proteins catalyze electron transfer between an NAD(P)-binding sub-domain of the alpha/beta class and a discrete (usually N-terminal) domain, which varies in orientation with respect to the NAD(P) binding domain Back     alignment and domain information
>cd06214 PA_degradation_oxidoreductase_like NAD(P) binding domain of ferredoxin reductase like phenylacetic acid (PA) degradation oxidoreductase Back     alignment and domain information
>cd06218 DHOD_e_trans FAD/NAD binding domain in the electron transfer subunit of dihydroorotate dehydrogenase Back     alignment and domain information
>cd06183 cyt_b5_reduct_like Cytochrome b5 reductase catalyzes the reduction of 2 molecules of cytochrome b5 using NADH as an electron donor Back     alignment and domain information
>PRK08221 anaerobic sulfite reductase subunit B; Provisional Back     alignment and domain information
>cd06185 PDR_like Phthalate dioxygenase reductase (PDR) is an FMN-dependent reductase that mediates electron transfer from NADH to FMN to an iron sulfur cluster Back     alignment and domain information
>PTZ00319 NADH-cytochrome B5 reductase; Provisional Back     alignment and domain information
>TIGR02911 sulfite_red_B sulfite reductase, subunit B Back     alignment and domain information
>PTZ00274 cytochrome b5 reductase; Provisional Back     alignment and domain information
>COG1018 Hmp Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 [Energy production and conversion] Back     alignment and domain information
>COG2871 NqrF Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF [Energy production and conversion] Back     alignment and domain information
>PRK00054 dihydroorotate dehydrogenase electron transfer subunit; Reviewed Back     alignment and domain information
>cd06220 DHOD_e_trans_like2 FAD/NAD binding domain in the electron transfer subunit of dihydroorotate dehydrogenase-like proteins Back     alignment and domain information
>cd06219 DHOD_e_trans_like1 FAD/NAD binding domain in the electron transfer subunit of dihydroorotate dehydrogenase-like proteins Back     alignment and domain information
>PRK06222 ferredoxin-NADP(+) reductase subunit alpha; Reviewed Back     alignment and domain information
>COG0543 UbiB 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases [Coenzyme metabolism / Energy production and conversion] Back     alignment and domain information
>cd06192 DHOD_e_trans_like FAD/NAD binding domain (electron transfer subunit) of dihydroorotate dehydrogenase-like proteins Back     alignment and domain information
>cd06197 FNR_like_2 FAD/NAD(P) binding domain of ferredoxin reductase-like proteins Back     alignment and domain information
>PLN02252 nitrate reductase [NADPH] Back     alignment and domain information
>KOG0534 consensus NADH-cytochrome b-5 reductase [Coenzyme transport and metabolism; Energy production and conversion] Back     alignment and domain information
>PRK05802 hypothetical protein; Provisional Back     alignment and domain information
>PTZ00306 NADH-dependent fumarate reductase; Provisional Back     alignment and domain information
>COG4097 Predicted ferric reductase [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK12778 putative bifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta; Provisional Back     alignment and domain information
>cd06193 siderophore_interacting Siderophore interacting proteins share the domain structure of the ferredoxin reductase like family Back     alignment and domain information
>cd06186 NOX_Duox_like_FAD_NADP NADPH oxidase (NOX) catalyzes the generation of reactive oxygen species (ROS) such as superoxide and hydrogen peroxide Back     alignment and domain information
>PF00175 NAD_binding_1: Oxidoreductase NAD-binding domain ; InterPro: IPR001433 Bacterial ferredoxin-NADP+ reductase may be bound to the thylakoid membrane or anchored to the thylakoid-bound phycobilisomes Back     alignment and domain information
>PRK12779 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional Back     alignment and domain information
>PRK12775 putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein; Provisional Back     alignment and domain information
>PLN02292 ferric-chelate reductase Back     alignment and domain information
>PLN02844 oxidoreductase/ferric-chelate reductase Back     alignment and domain information
>PLN02631 ferric-chelate reductase Back     alignment and domain information
>KOG3378 consensus Globins and related hemoproteins [Energy production and conversion] Back     alignment and domain information
>PF08030 NAD_binding_6: Ferric reductase NAD binding domain; InterPro: IPR013121 This entry contains ferric reductase NAD binding proteins Back     alignment and domain information
>KOG0039 consensus Ferric reductase, NADH/NADPH oxidase and related proteins [Inorganic ion transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PF00970 FAD_binding_6: Oxidoreductase FAD-binding domain; InterPro: IPR008333 These sequences contain an oxidoreductase FAD-binding domain Back     alignment and domain information
>PRK06567 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Validated Back     alignment and domain information
>COG2375 ViuB Siderophore-interacting protein [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF08021 FAD_binding_9: Siderophore-interacting FAD-binding domain; InterPro: IPR013113 Proteins in this entry are siderophore-interacting FAD-binding proteins Back     alignment and domain information
>PF08022 FAD_binding_8: FAD-binding domain; InterPro: IPR013112 This FAD binding domain is associated with ferric reductase NAD binding proteins and the heavy chain of Cytochrome b-245 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query443
3fjo_A637 Structure Of Chimeric Yh Cpr Length = 637 3e-58
3qfs_A458 Crystal Structure Of Nadph-Cytochrome P450 Reductas 4e-58
3qe2_A618 Crystal Structure Of Human Nadph-Cytochrome P450 Re 5e-58
3qfc_A618 Crystal Structure Of Human Nadph-Cytochrome P450 (V 2e-57
3qft_A458 Crystal Structure Of Nadph-Cytochrome P450 Reductas 3e-57
3qfr_A618 Crystal Structure Of Human Nadph-Cytochrome P450 Re 3e-57
1amo_A615 Three-Dimensional Structure Of Nadph-Cytochrome P45 6e-56
3es9_A618 Nadph-Cytochrome P450 Reductase In An Open Conforma 6e-56
1ja1_A622 Cypor-Triple Mutant Length = 622 7e-56
3ojx_A622 Disulfide Crosslinked Cytochrome P450 Reductase Ina 3e-55
1j9z_A622 Cypor-W677g Length = 622 1e-54
1ja0_A620 Cypor-W677x Length = 620 2e-54
1tll_A688 Crystal Structure Of Rat Neuronal Nitric-Oxide Synt 3e-40
1f20_A435 Crystal Structure Of Rat Neuronal Nitric-Oxide Synt 4e-40
4dqk_A391 Crystal Structure Of The Fad Binding Domain Of Cyto 4e-39
4dql_A393 Crystal Structure Of The Fad Binding Domain Of Cyto 1e-38
1ddg_A374 Crystal Structure Of Sir-Fp60 Length = 374 3e-38
2qtz_A539 Crystal Structure Of The Nadp+-Bound Fad-Containing 9e-38
2qtl_A539 Crystal Structure Of The Fad-Containing Fnr-Like Mo 1e-37
2bpo_A682 Crystal Structure Of The Yeast Cpr Triple Mutant: D 6e-30
2bf4_A682 A Second Fmn-Binding Site In Yeast Nadph-Cytochrome 7e-30
3vo1_A314 Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+ 3e-12
3vo2_A310 Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+ 3e-11
3lvb_A311 Crystal Structure Of The Ferredoxin:nadp+ Reductase 1e-10
1jb9_A316 Crystal Structure Of The Ferredoxin:nadp+ Reductase 1e-10
3lo8_A311 Crystal Structure Of The Oxidized Form Of Ferredoxi 2e-10
1gaq_A314 Crystal Structure Of The Complex Between Ferredoxin 4e-10
1sm4_A296 Crystal Structure Analysis Of The Ferredoxin-Nadp+ 5e-10
1w35_A304 Ferredoxin-Nadp+ Reductase (Mutation: Y 303 W) Leng 7e-10
1h85_A295 Ferredoxin:nadp+ Reductase Mutant With Val 136 Repl 4e-09
1qga_A308 Pea Fnr Y308w Mutant In Complex With Nadp+ Length = 4e-09
1qh0_A295 Ferredoxin:nadp+ Reductase Mutant With Leu 76 Mutat 4e-09
1quf_A304 X-Ray Structure Of A Complex Nadp+-Ferredoxin:nadp+ 5e-09
1go2_A304 Structure Of Ferredoxin-nadp+ Reductase With Lys 72 5e-09
1gr1_A303 Structure Of Ferredoxin-Nadp+ Reductase With Glu 13 5e-09
1gjr_A304 Ferredoxin-Nadp+ Reductase Complexed With Nadp+ By 5e-09
1bjk_A295 Ferredoxin:nadp+ Reductase Mutant With Arg 264 Repl 5e-09
1qgz_A295 Ferredoxin:nadp+ Reductase Mutant With Leu 78 Repla 6e-09
1ogj_A303 Ferredoxin:nadp+ Reductase Mutant With Leu 263 Repl 6e-09
1que_A303 X-Ray Structure Of The Ferredoxin:nadp+ Reductase F 6e-09
1ewy_A303 Anabaena Pcc7119 Ferredoxin:ferredoxin-Nadp+-Reduct 7e-09
1bqe_A295 Ferredoxin:nadp+ Reductase Mutant With Thr 155 Repl 8e-09
1w34_A304 Ferredoxin-Nadp Reductase (Mutation: Y 303 S) Lengt 9e-09
2x3u_A303 Ferredoxin-Nadp Reductase Mutant With Tyr 303 Repla 1e-08
1e62_A304 Ferredoxin:nadp+ Reductase Mutant With Lys 75 Repla 1e-08
2bsa_A303 Ferredoxin-Nadp Reductase (Mutation: Y 303 S) Compl 1e-08
1e64_A304 Ferredoxin:nadp+ Reductase Mutant With Lys 75 Repla 1e-08
1qgy_A295 Ferredoxin:nadp+ Reductase Mutant With Lys 75 Repla 2e-08
1e63_A304 Ferredoxin:nadp+ Reductase Mutant With Lys 75 Repla 2e-08
2bmw_A304 Ferredoxin: Nadp+reductase Mutant With Thr 155 Repl 2e-08
4af6_A308 Pea Fnr L268v Mutant Length = 308 2e-08
1ogi_A303 Ferredoxin:nadp+ Reductase Mutant With Thr 155 Repl 2e-08
1h42_A304 Ferredoxin:nadp+ Reductase Mutant With Thr 155 Repl 2e-08
1b2r_A304 Ferredoxin-Nadp+ Reductase (Mutation: E 301 A) Leng 3e-08
3mhp_A296 Fnr-Recruitment To The Thylakoid Length = 296 3e-08
1qg0_A308 Wild-type Pea Fnr Length = 308 3e-08
4af7_A308 Pea Fnr C266m Mutant Length = 308 4e-08
2vyq_A304 Ferredoxin:nadp Reductase Mutant With Thr 155 Repla 5e-08
1qfy_A308 Pea Fnr Y308s Mutant In Complex With Nadp+ Length = 6e-08
2xnc_A315 Crystal Structure Of An Engineered Ferredoxin Nadp 4e-07
1fnb_A314 Refined Crystal Structure Of Spinach Ferredoxin Red 5e-07
1bx1_A314 Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reducta 8e-07
1frn_A314 The Involvement Of Ser96 In The Catalytic Mechanism 1e-06
1frq_A314 Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reducta 2e-06
1bx0_A314 Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reducta 2e-06
2rc5_A314 Refined Structure Of Fnr From Leptospira Interrogan 9e-06
>pdb|3FJO|A Chain A, Structure Of Chimeric Yh Cpr Length = 637 Back     alignment and structure 
Iteration: 1

 Score =  222 bits (566), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 135/425 (31%), Positives = 221/425 (52%), Gaps = 26/425 (6%)
Query: 34  GKLSNYNNKA------VCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEIL 87
           G+L +Y N+         FL  +        G+ + + H E +   + I YE GD + + 
Sbjct: 224 GRLKSYENQKPPFDAKNPFLAAVTTNRKLNQGTERHLMHLELDISDSKIRYESGDHVAVY 283
Query: 88  PSQDPAAVDTFIQRCNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKLRTFVELTMDVTS 147
           P+ D A V+   +    D D ++++ + + ++      K+    P   RT +   +D+T+
Sbjct: 284 PANDSALVNQLGKILGADLDVVMSLNNLDEESN----KKHPFPCPTSYRTALTYYLDITN 339
Query: 148 ASPRRYFFEVMSYFATAEHEKERLQYFASP--EGRDDLYKYNQKERRTVLEVLEDFPSVQ 205
             PR      ++ +A+   E+E L+  AS   EG++    +  + RR +L +L+D PS++
Sbjct: 340 -PPRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVVEARRHILAILQDCPSLR 398
Query: 206 MPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLD 265
            PID L +L+P L+ R +SI+SS   HPN VH+   VV + T   R   G+ + WL   +
Sbjct: 399 PPIDHLCELLPRLQARYYSIASSSKVHPNSVHICAVVVEYETKAGRINKGVATNWLRAKE 458
Query: 266 P--QQG--IYIPAWFQKGSLPRP-PPSVPLILIGPGTGCAPFRGFVEERA-IQSSSGPAA 319
           P  + G    +P + +K     P   + P+I++GPGTG APF GF++ERA ++       
Sbjct: 459 PAGENGGRALVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPFIGFIQERAWLRQQGKEVG 518
Query: 320 PIIFFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQKVYVQHKMLEQ 378
             + ++GCR  D D+LYRE  L+    DG  ++       VAFSR+Q  KVYVQH + + 
Sbjct: 519 ETLLYYGCRRSDEDYLYRE-ELAQFHRDGALTQ-----LNVAFSREQSHKVYVQHLLKQD 572
Query: 379 SQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYH 438
            + +W L+   A IYV G A  M  DV +TF +IV++ G      A +++K L   GRY 
Sbjct: 573 REHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEHAQAVDYIKKLMTKGRYS 632
Query: 439 VEAWS 443
           ++ WS
Sbjct: 633 LDVWS 637
>pdb|3QFS|A Chain A, Crystal Structure Of Nadph-Cytochrome P450 Reductase (FadNADPH Domain) Length = 458 Back     alignment and structure
>pdb|3QE2|A Chain A, Crystal Structure Of Human Nadph-Cytochrome P450 Reductase Length = 618 Back     alignment and structure
>pdb|3QFC|A Chain A, Crystal Structure Of Human Nadph-Cytochrome P450 (V492e Mutant) Length = 618 Back     alignment and structure
>pdb|3QFT|A Chain A, Crystal Structure Of Nadph-Cytochrome P450 Reductase (FadNADPH DOMAIN And R457h Mutant) Length = 458 Back     alignment and structure
>pdb|3QFR|A Chain A, Crystal Structure Of Human Nadph-Cytochrome P450 Reductase (R457h Mutant) Length = 618 Back     alignment and structure
>pdb|1AMO|A Chain A, Three-Dimensional Structure Of Nadph-Cytochrome P450 Reductase: Prototype For Fmn-And Fad-Containing Enzymes Length = 615 Back     alignment and structure
>pdb|3ES9|A Chain A, Nadph-Cytochrome P450 Reductase In An Open Conformation Length = 618 Back     alignment and structure
>pdb|1JA1|A Chain A, Cypor-Triple Mutant Length = 622 Back     alignment and structure
>pdb|3OJX|A Chain A, Disulfide Crosslinked Cytochrome P450 Reductase Inactive Length = 622 Back     alignment and structure
>pdb|1J9Z|A Chain A, Cypor-W677g Length = 622 Back     alignment and structure
>pdb|1JA0|A Chain A, Cypor-W677x Length = 620 Back     alignment and structure
>pdb|1TLL|A Chain A, Crystal Structure Of Rat Neuronal Nitric-Oxide Synthase Reductase Module At 2.3 A Resolution. Length = 688 Back     alignment and structure
>pdb|1F20|A Chain A, Crystal Structure Of Rat Neuronal Nitric-Oxide Synthase FadNADP+ Domain At 1.9a Resolution Length = 435 Back     alignment and structure
>pdb|4DQK|A Chain A, Crystal Structure Of The Fad Binding Domain Of Cytochrome P450 Bm3 Length = 391 Back     alignment and structure
>pdb|4DQL|A Chain A, Crystal Structure Of The Fad Binding Domain Of Cytochrome P450 Bm3 In Complex With Nadp+ Length = 393 Back     alignment and structure
>pdb|1DDG|A Chain A, Crystal Structure Of Sir-Fp60 Length = 374 Back     alignment and structure
>pdb|2QTZ|A Chain A, Crystal Structure Of The Nadp+-Bound Fad-Containing Fnr-Like Module Of Human Methionine Synthase Reductase Length = 539 Back     alignment and structure
>pdb|2QTL|A Chain A, Crystal Structure Of The Fad-Containing Fnr-Like Module Of Human Methionine Synthase Reductase Length = 539 Back     alignment and structure
>pdb|2BPO|A Chain A, Crystal Structure Of The Yeast Cpr Triple Mutant: D74g, Y75f, K78a. Length = 682 Back     alignment and structure
>pdb|2BF4|A Chain A, A Second Fmn-Binding Site In Yeast Nadph-Cytochrome P450 Reductase Suggests A Novel Mechanism Of Electron Transfer By Diflavin Reductases. Length = 682 Back     alignment and structure
>pdb|3VO1|A Chain A, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+ Reductase Ii Length = 314 Back     alignment and structure
>pdb|3VO2|A Chain A, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+ Reductase Iii Length = 310 Back     alignment and structure
>pdb|3LVB|A Chain A, Crystal Structure Of The Ferredoxin:nadp+ Reductase From Maize Root At 1.7 Angstroms - Test Set Withheld Length = 311 Back     alignment and structure
>pdb|1JB9|A Chain A, Crystal Structure Of The Ferredoxin:nadp+ Reductase From Maize Root At 1.7 Angstroms Length = 316 Back     alignment and structure
>pdb|3LO8|A Chain A, Crystal Structure Of The Oxidized Form Of Ferredoxin:nadp+ Reductase From Maize Root At 1.05 Angstroms Length = 311 Back     alignment and structure
>pdb|1GAQ|A Chain A, Crystal Structure Of The Complex Between Ferredoxin And Ferredoxin-Nadp+ Reductase Length = 314 Back     alignment and structure
>pdb|1SM4|A Chain A, Crystal Structure Analysis Of The Ferredoxin-Nadp+ Reductase From Paprika Length = 296 Back     alignment and structure
>pdb|1W35|A Chain A, Ferredoxin-Nadp+ Reductase (Mutation: Y 303 W) Length = 304 Back     alignment and structure
>pdb|1H85|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Val 136 Replaced By Leu (V136l) Length = 295 Back     alignment and structure
>pdb|1QGA|A Chain A, Pea Fnr Y308w Mutant In Complex With Nadp+ Length = 308 Back     alignment and structure
>pdb|1QH0|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Leu 76 Mutated By Asp And Leu 78 Mutated By Asp Length = 295 Back     alignment and structure
>pdb|1QUF|A Chain A, X-Ray Structure Of A Complex Nadp+-Ferredoxin:nadp+ Reductase From The Cyanobacterium Anabaena Pcc 7119 At 2.25 Angstroms Length = 304 Back     alignment and structure
>pdb|1GO2|A Chain A, Structure Of Ferredoxin-nadp+ Reductase With Lys 72 Replaced By Glu (k72e) Length = 304 Back     alignment and structure
>pdb|1GR1|A Chain A, Structure Of Ferredoxin-Nadp+ Reductase With Glu 139 Replaced By Lys (E139k) Length = 303 Back     alignment and structure
>pdb|1GJR|A Chain A, Ferredoxin-Nadp+ Reductase Complexed With Nadp+ By Cocrystallization Length = 304 Back     alignment and structure
>pdb|1BJK|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Arg 264 Replaced By Glu (r264e) Length = 295 Back     alignment and structure
>pdb|1QGZ|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Leu 78 Replaced By Asp (L78d) Length = 295 Back     alignment and structure
>pdb|1OGJ|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Leu 263 Replaced By Pro (L263p) Length = 303 Back     alignment and structure
>pdb|1QUE|A Chain A, X-Ray Structure Of The Ferredoxin:nadp+ Reductase From The Cyanobacterium Anabaena Pcc 7119 At 1.8 Angstroms Length = 303 Back     alignment and structure
>pdb|1EWY|A Chain A, Anabaena Pcc7119 Ferredoxin:ferredoxin-Nadp+-Reductase Complex Length = 303 Back     alignment and structure
>pdb|1BQE|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Thr 155 Replaced By Gly (T155g) Length = 295 Back     alignment and structure
>pdb|1W34|A Chain A, Ferredoxin-Nadp Reductase (Mutation: Y 303 S) Length = 304 Back     alignment and structure
>pdb|2X3U|A Chain A, Ferredoxin-Nadp Reductase Mutant With Tyr 303 Replaced By Phe (Y303f) Length = 303 Back     alignment and structure
>pdb|1E62|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By Arg (K75r) Length = 304 Back     alignment and structure
>pdb|2BSA|A Chain A, Ferredoxin-Nadp Reductase (Mutation: Y 303 S) Complexed With Nadp Length = 303 Back     alignment and structure
>pdb|1E64|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By Gln (K75q) Length = 304 Back     alignment and structure
>pdb|1QGY|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By Glu (K75e) Length = 295 Back     alignment and structure
>pdb|1E63|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By Ser (K75s) Length = 304 Back     alignment and structure
>pdb|2BMW|A Chain A, Ferredoxin: Nadp+reductase Mutant With Thr 155 Replaced By Gly, Ala 160 Replaced By Thr, Leu 263 Replaced By Pro, Arg 264 Replaced By Pro And Gly 265 Replaced By Pro (T155g- A160t-L263p-R264p-G265p) Length = 304 Back     alignment and structure
>pdb|4AF6|A Chain A, Pea Fnr L268v Mutant Length = 308 Back     alignment and structure
>pdb|1OGI|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Thr 155 Replaced By Gly And Ala 160 Replaced By Thr (T155g-A160t) Length = 303 Back     alignment and structure
>pdb|1H42|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Thr 155 Replaced By Gly, Ala 160 Replaced By Thr And Leu 263 Replaced By Pro (T155g-A160t-L263p) Length = 304 Back     alignment and structure
>pdb|1B2R|A Chain A, Ferredoxin-Nadp+ Reductase (Mutation: E 301 A) Length = 304 Back     alignment and structure
>pdb|3MHP|A Chain A, Fnr-Recruitment To The Thylakoid Length = 296 Back     alignment and structure
>pdb|1QG0|A Chain A, Wild-type Pea Fnr Length = 308 Back     alignment and structure
>pdb|4AF7|A Chain A, Pea Fnr C266m Mutant Length = 308 Back     alignment and structure
>pdb|2VYQ|A Chain A, Ferredoxin:nadp Reductase Mutant With Thr 155 Replaced By Gly, Ala 160 Replaced By Thr, Leu 263 Replaced By Pro And Tyr 303 Replaced By Ser (T155g-A160t-L263p-Y303s) Length = 304 Back     alignment and structure
>pdb|1QFY|A Chain A, Pea Fnr Y308s Mutant In Complex With Nadp+ Length = 308 Back     alignment and structure
>pdb|2XNC|A Chain A, Crystal Structure Of An Engineered Ferredoxin Nadp Reductase (Fnr) From Pisum Sativum Length = 315 Back     alignment and structure
>pdb|1FNB|A Chain A, Refined Crystal Structure Of Spinach Ferredoxin Reductase At 1.7 Angstroms Resolution: Oxidized, Reduced, And 2'- Phospho-5'-Amp Bound States Length = 314 Back     alignment and structure
>pdb|1BX1|A Chain A, Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reductase) Mutant E312q Length = 314 Back     alignment and structure
>pdb|1FRN|A Chain A, The Involvement Of Ser96 In The Catalytic Mechanism Of Ferredoxin-Nadp+ Reductase: Structure-Function Relationship As Studied By Site-Directed Mutagenesis And X- Ray Crystallography Length = 314 Back     alignment and structure
>pdb|1FRQ|A Chain A, Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reductase) Mutant E312a Length = 314 Back     alignment and structure
>pdb|1BX0|A Chain A, Ferredoxin:nadp+ Oxidoreductase (Ferredoxin Reductase) Mutant E312l Length = 314 Back     alignment and structure
>pdb|2RC5|A Chain A, Refined Structure Of Fnr From Leptospira Interrogans Length = 314 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query443
3qe2_A618 CPR, P450R, NADPH--cytochrome P450 reductase; cypo 1e-163
3qfs_A458 CPR, P450R, NADPH--cytochrome P450 reductase; flav 1e-160
2qtl_A539 MSR;, methionine synthase reductase; alpha-beta-al 1e-158
1f20_A435 Nitric-oxide synthase; nitric-xoide synthase, redu 1e-150
2bpo_A682 CPR, P450R, NADPH-cytochrom P450 reductase; NADPH- 1e-147
4dql_A393 Bifunctional P-450/NADPH-P450 reductase; rossmann 1e-147
1tll_A688 Nitric-oxide synthase, brain; reductase module, FM 1e-146
1ddg_A374 Sulfite reductase (NADPH) flavoprotein alpha- comp 1e-142
2rc5_A314 Ferredoxin-NADP reductase; FAD, oxidoreductase; HE 1e-81
2bmw_A304 Ferredoxin--NADP reductase; oxidoreductase, flavop 1e-78
3lo8_A311 Ferredoxin--NADP reductase; electron transport, ox 1e-77
1fnb_A314 Ferredoxin-NADP+ reductase; oxidoreductase (NADP+( 3e-77
3jqq_A316 Ferredoxin NADP reductase; FAD, oxidoreductase; HE 2e-69
2b5o_A402 FNR, ferredoxin--NADP reductase; complex with FAD, 5e-68
1krh_A338 Benzoate 1,2-dioxygenase reductase; alpha-beta, FA 4e-11
1tvc_A250 Methane monooxygenase component C, methane monooxy 3e-10
1qfj_A232 Protein (flavin reductase); riboflavin, ferredoxin 3e-10
2bgi_A272 Ferredoxin-NADP(H) reductase; ferredoxin(flavodoxi 1e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-04
2r6h_A290 NADH:ubiquinone oxidoreductase, Na translocating, 3e-08
2qdx_A257 Ferredoxin reductase; oxidoreductase; HET: FAD; 1. 4e-08
1gvh_A396 Flavohemoprotein; oxidoreductase, NADP, heme, flav 1e-07
4fk8_A271 Ferredoxin--NADP reductase; ssgcid, NIH, niaid, st 8e-07
1cqx_A403 Flavohemoprotein; globin fold, six-stranded antipa 2e-06
2cnd_A270 NADH-dependent nitrate reductase; nitrate assimila 8e-06
1fdr_A248 Flavodoxin reductase; ferredoxin reductase, flavin 1e-05
2eix_A243 NADH-cytochrome B5 reductase; flavoprotein, FAD-bi 7e-05
1umk_A275 B5R, NADH-cytochrome B5 reductase; flavoprotein, b 2e-04
4eh1_A243 Flavohemoprotein; structural genomics, niaid, nati 5e-04
>3qe2_A CPR, P450R, NADPH--cytochrome P450 reductase; cypor, antley-bixler syndrome, flavoprotein, FMN, FAD, oxidoreductase; HET: FAD FMN NAP; 1.75A {Homo sapiens} PDB: 3qfc_A* 3qfr_A* 1amo_A* 1j9z_A* 1ja0_A* 1ja1_A* 3es9_A* 3ojw_A* 3ojx_A* 3fjo_A* 1b1c_A* Length = 618 Back     alignment and structure
 Score =  473 bits (1220), Expect = e-163
 Identities = 129/422 (30%), Positives = 212/422 (50%), Gaps = 23/422 (5%)

Query: 32  SAGKLSNYNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQD 91
              +   ++ K      +  N+ L + G+ + + H E +   + I YE GD + + P+ D
Sbjct: 210 YENQKPPFDAKNPFLAAVTTNRKLNQ-GTERHLMHLELDISDSKIRYESGDHVAVYPAND 268

Query: 92  PAAVDTFIQRCNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKLRTFVELTMDVTSASPR 151
            A V+   +    D D ++++ + + ++         T     L  ++++T       PR
Sbjct: 269 SALVNQLGKILGADLDVVMSLNNLDEESNKKHPFPCPTSYRTALTYYLDIT-----NPPR 323

Query: 152 RYFFEVMSYFATAEHEKERLQYFASP--EGRDDLYKYNQKERRTVLEVLEDFPSVQMPID 209
                 ++ +A+   E+E L+  AS   EG++    +  + RR +L +L+D PS++ PID
Sbjct: 324 TNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVVEARRHILAILQDCPSLRPPID 383

Query: 210 WLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDP--- 266
            L +L+P L+ R +SI+SS   HPN VH+   VV + T   R   G+ + WL   +P   
Sbjct: 384 HLCELLPRLQARYYSIASSSKVHPNSVHICAVVVEYETKAGRINKGVATNWLRAKEPVGE 443

Query: 267 -QQGIYIPAWFQKGSLPRPP--PSVPLILIGPGTGCAPFRGFVEERAIQSSSGPA-APII 322
                 +P + +K    R P   + P+I++GPGTG APF GF++ERA     G      +
Sbjct: 444 NGGRALVPMFVRKSQF-RLPFKATTPVIMVGPGTGVAPFIGFIQERAWLRQQGKEVGETL 502

Query: 323 FFFGCRNED-DFLYRELWLSHSLNDGVFSEAKGGGFYVAFSRKQPQKVYVQHKMLEQSQR 381
            ++GCR  D D+LYRE        DG  ++       VAFSR+Q  KVYVQH + +  + 
Sbjct: 503 LYYGCRRSDEDYLYREELAQF-HRDGALTQ-----LNVAFSREQSHKVYVQHLLKQDREH 556

Query: 382 IWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANWLKALQRAGRYHVEA 441
           +W L+   A IYV G A  M  DV +TF +IV++ G      A +++K L   GRY ++ 
Sbjct: 557 LWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEHAQAVDYIKKLMTKGRYSLDV 616

Query: 442 WS 443
           WS
Sbjct: 617 WS 618
>3qfs_A CPR, P450R, NADPH--cytochrome P450 reductase; flavoprotein, FAD, oxidoreductase; HET: FAD NAP; 1.40A {Homo sapiens} PDB: 3qft_A* Length = 458 Back     alignment and structure
>2qtl_A MSR;, methionine synthase reductase; alpha-beta-alpha structural motif, flattened antiparallel BE barrel, flexible hinge region, connecting domain; HET: FAD; 1.90A {Homo sapiens} PDB: 2qtz_A* Length = 539 Back     alignment and structure
>1f20_A Nitric-oxide synthase; nitric-xoide synthase, reductase domain, FAD, NADP+, oxidore; HET: FAD NAP; 1.90A {Rattus norvegicus} SCOP: b.43.4.1 c.25.1.4 Length = 435 Back     alignment and structure
>2bpo_A CPR, P450R, NADPH-cytochrom P450 reductase; NADPH-cytochrome P450 reductase, diflavin reductase, FAD, FMN-binding, electron transfer; HET: FAD FMN NAP; 2.9A {Saccharomyces cerevisiae} PDB: 2bn4_A* 2bf4_A* Length = 682 Back     alignment and structure
>4dql_A Bifunctional P-450/NADPH-P450 reductase; rossmann fold, redox, FAD and NADP+ binding, oxidoreductase; HET: FAD NAP 1PE PG4; 2.15A {Bacillus megaterium} PDB: 4dqk_A* Length = 393 Back     alignment and structure
>1tll_A Nitric-oxide synthase, brain; reductase module, FMN, FAD, NADP+, oxidoreductase; HET: FMN FAD NAP; 2.30A {Rattus norvegicus} SCOP: b.43.4.1 c.23.5.2 c.25.1.4 Length = 688 Back     alignment and structure
>1ddg_A Sulfite reductase (NADPH) flavoprotein alpha- component; cytochrome P450 reductase, FNR, modular protein, oxidoreductase; HET: FAD; 2.01A {Escherichia coli} SCOP: b.43.4.1 c.25.1.4 PDB: 1ddi_A* Length = 374 Back     alignment and structure
>2rc5_A Ferredoxin-NADP reductase; FAD, oxidoreductase; HET: FAD; 2.43A {Leptospira interrogans} PDB: 2rc6_A* Length = 314 Back     alignment and structure
>2bmw_A Ferredoxin--NADP reductase; oxidoreductase, flavoprotein, FAD, FNR, reductase reductase, phycobilisome, thylakoid; HET: FAD; 1.5A {Anabaena SP} SCOP: b.43.4.2 c.25.1.1 PDB: 1h42_A* 2vyq_A* 2vzl_A* 1ogi_A* 1ogj_A* 1gjr_A* 1e62_A* 1e64_A* 1quf_A* 1e63_A* 1go2_A* 1w34_A* 1b2r_A* 1w35_A* 1w87_A* 1que_A* 1ewy_A* 1gr1_A* 2bsa_A* 1bqe_A* ... Length = 304 Back     alignment and structure
>3lo8_A Ferredoxin--NADP reductase; electron transport, oxidoreductase, FAD, flavoprotein; HET: FAD; 1.05A {Zea mays} PDB: 3lvb_A* 1jb9_A* Length = 311 Back     alignment and structure
>1fnb_A Ferredoxin-NADP+ reductase; oxidoreductase (NADP+(A),ferredoxin(A)); HET: FAD; 1.70A {Spinacia oleracea} SCOP: b.43.4.2 c.25.1.1 PDB: 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 1qg0_A* 1qga_A* 1qfz_A* 1qfy_A* 1gaw_A* 1gaq_A* 3mhp_A* 1sm4_A* 2xnc_A* Length = 314 Back     alignment and structure
>3jqq_A Ferredoxin NADP reductase; FAD, oxidoreductase; HET: FAD A2P; 2.20A {Plasmodium falciparum} PDB: 2ok8_A* 2ok7_A* 3jqr_A* 3jqp_A* Length = 316 Back     alignment and structure
>2b5o_A FNR, ferredoxin--NADP reductase; complex with FAD, oxidoreductase; HET: FAD; 2.50A {Synechococcus SP} Length = 402 Back     alignment and structure
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2 Length = 338 Back     alignment and structure
>1tvc_A Methane monooxygenase component C, methane monooxygenase; FAD-binding, NADH-binding, oxidoreductase; HET: FDA; NMR {Methylococcus capsulatus} SCOP: b.43.4.2 c.25.1.2 Length = 250 Back     alignment and structure
>1qfj_A Protein (flavin reductase); riboflavin, ferredoxin reductase superfami oxidoreductase; 2.20A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1 Length = 232 Back     alignment and structure
>2bgi_A Ferredoxin-NADP(H) reductase; ferredoxin(flavodoxin)-NADP(H) reductase, flavoproteins, electron transfer, oxidoreductase; HET: FAD HTG; 1.68A {Rhodobacter capsulatus} PDB: 2bgj_A* 2vnh_A* 2vni_A* 2vnj_A* 2vnk_A* Length = 272 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2r6h_A NADH:ubiquinone oxidoreductase, Na translocating, subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: FAD; 2.95A {Porphyromonas gingivalis} Length = 290 Back     alignment and structure
>2qdx_A Ferredoxin reductase; oxidoreductase; HET: FAD; 1.55A {Pseudomonas aeruginosa} PDB: 3crz_A* 1a8p_A* Length = 257 Back     alignment and structure
>1gvh_A Flavohemoprotein; oxidoreductase, NADP, heme, flavoprotein, FAD, iron transpor; HET: FAD HEM; 2.19A {Escherichia coli} SCOP: a.1.1.2 b.43.4.2 c.25.1.5 Length = 396 Back     alignment and structure
>4fk8_A Ferredoxin--NADP reductase; ssgcid, NIH, niaid, structural genomics, national institute allergy and infectious diseases; HET: FAD; 2.10A {Burkholderia thailandensis} PDB: 4f7d_A* Length = 271 Back     alignment and structure
>1cqx_A Flavohemoprotein; globin fold, six-stranded antiparallel beta sheet, helix-FLA five-stranded parallel beta sheet, lipid binding protein; HET: HEM FAD DGG; 1.75A {Cupriavidus necator} SCOP: a.1.1.2 b.43.4.2 c.25.1.5 PDB: 3ozu_A* 3ozv_B* 3ozw_A* Length = 403 Back     alignment and structure
>2cnd_A NADH-dependent nitrate reductase; nitrate assimilating enzyme, oxidoreductase, nitrogenous acceptor; HET: FAD; 2.50A {Zea mays} SCOP: b.43.4.2 c.25.1.1 PDB: 1cnf_A* 1cne_A* Length = 270 Back     alignment and structure
>1fdr_A Flavodoxin reductase; ferredoxin reductase, flavin, oxidoreductase, flavoprotein; HET: FAD; 1.70A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1 PDB: 2xnj_A* 3fpk_A* Length = 248 Back     alignment and structure
>2eix_A NADH-cytochrome B5 reductase; flavoprotein, FAD-binding domain, NADH-binding, oxidoreducta; HET: FAD; 1.56A {Physarum polycephalum} Length = 243 Back     alignment and structure
>1umk_A B5R, NADH-cytochrome B5 reductase; flavoprotein, beta barrel, FAD-binding domain, NADH-binding domain, oxidoreductase; HET: FAD; 1.75A {Homo sapiens} SCOP: b.43.4.2 c.25.1.1 PDB: 1ndh_A* 1i7p_A* 1ib0_A* 1qx4_A* Length = 275 Back     alignment and structure
>4eh1_A Flavohemoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: FAD; 2.20A {Vibrio cholerae o1 biovar el tor} Length = 243 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query443
3qfs_A458 CPR, P450R, NADPH--cytochrome P450 reductase; flav 100.0
2qtl_A539 MSR;, methionine synthase reductase; alpha-beta-al 100.0
3qe2_A618 CPR, P450R, NADPH--cytochrome P450 reductase; cypo 100.0
4dql_A393 Bifunctional P-450/NADPH-P450 reductase; rossmann 100.0
1f20_A435 Nitric-oxide synthase; nitric-xoide synthase, redu 100.0
2bpo_A682 CPR, P450R, NADPH-cytochrom P450 reductase; NADPH- 100.0
1ddg_A374 Sulfite reductase (NADPH) flavoprotein alpha- comp 100.0
1tll_A688 Nitric-oxide synthase, brain; reductase module, FM 100.0
1fnb_A314 Ferredoxin-NADP+ reductase; oxidoreductase (NADP+( 100.0
2bmw_A304 Ferredoxin--NADP reductase; oxidoreductase, flavop 100.0
3vo2_A310 Putative uncharacterized protein; rossmann fold, o 100.0
2b5o_A402 FNR, ferredoxin--NADP reductase; complex with FAD, 100.0
2rc5_A314 Ferredoxin-NADP reductase; FAD, oxidoreductase; HE 100.0
3lo8_A311 Ferredoxin--NADP reductase; electron transport, ox 100.0
3jqq_A316 Ferredoxin NADP reductase; FAD, oxidoreductase; HE 100.0
1tvc_A250 Methane monooxygenase component C, methane monooxy 99.95
2r6h_A290 NADH:ubiquinone oxidoreductase, Na translocating, 99.95
1qfj_A232 Protein (flavin reductase); riboflavin, ferredoxin 99.95
1fdr_A248 Flavodoxin reductase; ferredoxin reductase, flavin 99.94
1krh_A338 Benzoate 1,2-dioxygenase reductase; alpha-beta, FA 99.94
2eix_A243 NADH-cytochrome B5 reductase; flavoprotein, FAD-bi 99.94
1umk_A275 B5R, NADH-cytochrome B5 reductase; flavoprotein, b 99.94
4eh1_A243 Flavohemoprotein; structural genomics, niaid, nati 99.94
4fk8_A271 Ferredoxin--NADP reductase; ssgcid, NIH, niaid, st 99.93
2bgi_A272 Ferredoxin-NADP(H) reductase; ferredoxin(flavodoxi 99.93
2qdx_A257 Ferredoxin reductase; oxidoreductase; HET: FAD; 1. 99.93
1gvh_A396 Flavohemoprotein; oxidoreductase, NADP, heme, flav 99.93
4g1v_A399 Flavohemoglobin; three domains: globin fold, antip 99.93
2cnd_A270 NADH-dependent nitrate reductase; nitrate assimila 99.93
1ep3_B262 Dihydroorotate dehydrogenase B (PYRK subunit); het 99.92
1cqx_A403 Flavohemoprotein; globin fold, six-stranded antipa 99.92
2pia_A321 Phthalate dioxygenase reductase; HET: FMN; 2.00A { 99.91
2gpj_A252 Siderophore-interacting protein; structural genomi 99.79
3lrx_A158 Putative hydrogenase; alpha-beta protein, structur 99.76
3lyu_A142 Putative hydrogenase; the C-terminal has AN alpha- 99.71
3a1f_A186 Cytochrome B-245 heavy chain; GP91(PHOX), NADPH bi 99.7
3lo8_A311 Ferredoxin--NADP reductase; electron transport, ox 82.41
>3qfs_A CPR, P450R, NADPH--cytochrome P450 reductase; flavoprotein, FAD, oxidoreductase; HET: FAD NAP; 1.40A {Homo sapiens} PDB: 3qft_A* Back     alignment and structure
Probab=100.00  E-value=2.5e-85  Score=681.43  Aligned_cols=390  Identities=33%  Similarity=0.629  Sum_probs=356.4

Q ss_pred             cccCccce-eEEEeeeecCCCCCCcEEEEEEEecCCCcccCCCCEEEEccCCCHHHHHHHHHHcCCCCCceEEEeeCCcc
Q 013425           40 NNKAVCFL-KMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKEMK  118 (443)
Q Consensus        40 ~~~~~~~~-~v~~~~~Lt~~~~~~~v~~i~l~~~~~~~~y~~GD~l~I~p~N~~~~V~~~l~~l~l~~~~~v~i~~~~~~  118 (443)
                      .++.++|. +|++|++||+ +++++|+||+||+++++++|+|||+|+|||.|+++.|+++|++||+++++.|++......
T Consensus        57 ~~~~~p~~a~v~~n~~Lt~-~~~r~~~hie~dl~~s~l~Y~~GD~l~V~p~N~~~~V~~~l~~l~~~~d~~v~~~~~~~~  135 (458)
T 3qfs_A           57 FDAKNPFLAAVTTNRKLNQ-GTERHLMHLELDISDSKIRYESGDHVAVYPANDSALVNQLGKILGADLDVVMSLNNLDEE  135 (458)
T ss_dssp             CCSSSCEEEEEEEEEECCS-SSSSCEEEEEEECTTSCCCCCTTCEEEECCCCCHHHHHHHHHHHTCCTTCEEEEEESSTT
T ss_pred             CCCCCCEEEEEEEEEEcCC-CCCCCEEEEEEEeCCCCcccCCCCEEEEEeeCCHHHHHHHHHHhCcCCCceEEecCCCcc
Confidence            34566788 9999999998 468999999999998899999999999999999999999999999999999999764432


Q ss_pred             CCCCccccCCCCCcchHHHHHHHccccCCCCCCHHHHHHHHHhccChhHHHHHHhhcCC--CChHHHHHHHHhcCCCHHH
Q 013425          119 NYLPDIHKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASP--EGRDDLYKYNQKERRTVLE  196 (443)
Q Consensus       119 ~~~~~~~~~~~~~~~tl~~ll~~~~Dl~~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~--~~~~~~~~~~~~~~~~l~d  196 (443)
                      ...    +.+++.++|++++|++|+||++ +|+++||+.||.||+|+.+|++|+.|++.  +|+++|.+|+.+++++++|
T Consensus       136 ~~~----~~p~~~~~tl~~~l~~~~di~~-~p~~~~l~~la~~a~~~~ek~~L~~l~~~~~~~~~~~~~~~~~~~~~ild  210 (458)
T 3qfs_A          136 SNK----KHPFPCPTSYRTALTYYLDITN-PPRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVVEARRHILA  210 (458)
T ss_dssp             CSC----CCSSSSSEEHHHHHHHTBCCSS-CCCHHHHHHHGGGBCSHHHHHHHHHHHSCSHHHHHHHHHHTTTTTCCHHH
T ss_pred             ccc----CCCCCCCeeHHHHHHhcEeccC-CCCHHHHHHHHHHcCCHHHHHHHHHHhccCcccHHHHHHHHhhcCCCHHH
Confidence            222    2356889999999999999999 99999999999999999999999999984  6789999999999999999


Q ss_pred             HHhhCCCCCCCHHHHHHhcCCCCcceeecCCCCCCCCCeEEEEEEEEEecCCCCcccCCcccccccCCCCCCCc------
Q 013425          197 VLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGI------  270 (443)
Q Consensus       197 ~L~~f~s~~~p~~~ll~~lp~~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~~~G~------  270 (443)
                      +|.+||++++|+++|++.+|+++||+|||||+|..+++.++|+|++|+|++..++.+.|+||+||+++.+  |+      
T Consensus       211 vL~~fps~~~p~~~ll~~lp~l~pR~YSIsSsp~~~~~~i~ltV~vv~~~~~~~r~~~G~~S~~L~~l~~--gg~~~~~~  288 (458)
T 3qfs_A          211 ILQDCPSLRPPIDHLCELLPRLQARYYSIASSSKVHPNSVHICAVVVEYETKAGRINKGVATNWLRAKEP--VGENGGRA  288 (458)
T ss_dssp             HHHHSTTBCCCHHHHHHHSCBCCCEEEECCSCTTTCTTEEEEEEECCEEECTTSCEEECHHHHHHHTCCS--SCSSCCCC
T ss_pred             HHHhCCccCCCHHHHHhhCCCCcceeEeeccCcccCCCEEEEEEEEEEecCCCCCCCCCchhHHHHhhcc--CCccCCce
Confidence            9999999999999999999999999999999998778999999999999998888999999999998876  54      


Q ss_pred             EEEEEeecCCCCCC-CCCCCeEEEeCCccchhHHHHHHHHHHhcCCC-CCCCEEEEEeecCC-ccccCHHHHHHhhhcCC
Q 013425          271 YIPAWFQKGSLPRP-PPSVPLILIGPGTGCAPFRGFVEERAIQSSSG-PAAPIIFFFGCRNE-DDFLYRELWLSHSLNDG  347 (443)
Q Consensus       271 ~v~i~~~~g~F~lp-~~~~piImIa~GTGIAPfrs~lq~~~~~~~~~-~~~~~~L~~G~R~~-~d~ly~~el~~~~~~~g  347 (443)
                      .|.+.+|.|.|++| ++.+|+||||+|||||||+||++++......+ ..++++||||||++ .|++|++||++|.+. |
T Consensus       289 ~v~v~~p~g~F~lp~~~~~piImIggGTGIAPfrs~lq~r~~l~~~g~~~~~~~Lf~G~R~~~~D~ly~dEl~~l~~~-g  367 (458)
T 3qfs_A          289 LVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPFIGFIQERAWLRQQGKEVGETLLYYGCRRSDEDYLYREELAQFHRD-G  367 (458)
T ss_dssp             EEEEEEECCSCCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHHHTCCCCCEEEEEEESCTTTSCTTHHHHHHHHHH-T
T ss_pred             EEEEEecCCCcccCCCCCCceEEEcCCcchhhHHHHHHHHHHHHhcCCCCCCEEEEEEeCCchHhhhHHHHHHHHHHc-C
Confidence            69999999999999 77899999999999999999999986422111 23789999999997 499999999999988 6


Q ss_pred             CccccCCCeEEEEEccCCCCcccchhhHHHcHHHHHHhhcCCCEEEEeCCCCchHHHHHHHHHHHHHHhCCCCHHHHHHH
Q 013425          348 VFSEAKGGGFYVAFSRKQPQKVYVQHKMLEQSQRIWNLLLSKASIYVAGSATKMPSDVWSTFEEIVSKEGEASRDSAANW  427 (443)
Q Consensus       348 ~l~~~~~~~~~~a~Sr~~~~k~yVqd~l~~~~~~l~~~l~~~~~iyvCG~~~~M~~~V~~~L~~i~~~~~~~~~~~a~~~  427 (443)
                      .++     ++++||||+++.++||||.|+++.+.+|+++.++++||||||++.|+++|.++|.+|++++++++.++|++|
T Consensus       368 ~l~-----~l~~a~SRd~~~k~yVqd~l~~~~~~l~~~l~~~~~vYvCGp~~~M~~~V~~~L~~i~~~~g~~~~~~A~~~  442 (458)
T 3qfs_A          368 ALT-----QLNVAFSREQSHKVYVQHLLKQDREHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEHAQAVDY  442 (458)
T ss_dssp             SSS-----EEEEEETTSSSSCCCHHHHHHHTHHHHHHHHHTTCEEEEEEETTTHHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred             CCC-----EEEEEEECCCCCcccHhHHHHHhHHHHHHHhcCCCEEEEECCCHHHHHHHHHHHHHHHHHcCCCCHHHHHHH
Confidence            665     899999999988999999999999999999988999999999768999999999999999999999999999


Q ss_pred             HHHHHHcCCEEEeecC
Q 013425          428 LKALQRAGRYHVEAWS  443 (443)
Q Consensus       428 l~~l~~~~Ry~~dvWs  443 (443)
                      +++|+++|||++||||
T Consensus       443 ~~~l~~~~RY~~Dvws  458 (458)
T 3qfs_A          443 IKKLMTKGRYSLDVWS  458 (458)
T ss_dssp             HHHHHHTTSEEEEEEC
T ss_pred             HHHHHHCCCeEEEecC
Confidence            9999999999999998
>2qtl_A MSR;, methionine synthase reductase; alpha-beta-alpha structural motif, flattened antiparallel BE barrel, flexible hinge region, connecting domain; HET: FAD; 1.90A {Homo sapiens} PDB: 2qtz_A* Back     alignment and structure
>3qe2_A CPR, P450R, NADPH--cytochrome P450 reductase; cypor, antley-bixler syndrome, flavoprotein, FMN, FAD, oxidoreductase; HET: FAD FMN NAP; 1.75A {Homo sapiens} PDB: 3qfc_A* 3qfr_A* 1amo_A* 1j9z_A* 1ja0_A* 1ja1_A* 3es9_A* 3ojw_A* 3ojx_A* 3fjo_A* 1b1c_A* Back     alignment and structure
>4dql_A Bifunctional P-450/NADPH-P450 reductase; rossmann fold, redox, FAD and NADP+ binding, oxidoreductase; HET: FAD NAP 1PE PG4; 2.15A {Bacillus megaterium} PDB: 4dqk_A* Back     alignment and structure
>1f20_A Nitric-oxide synthase; nitric-xoide synthase, reductase domain, FAD, NADP+, oxidore; HET: FAD NAP; 1.90A {Rattus norvegicus} SCOP: b.43.4.1 c.25.1.4 Back     alignment and structure
>2bpo_A CPR, P450R, NADPH-cytochrom P450 reductase; NADPH-cytochrome P450 reductase, diflavin reductase, FAD, FMN-binding, electron transfer; HET: FAD FMN NAP; 2.9A {Saccharomyces cerevisiae} PDB: 2bn4_A* 2bf4_A* Back     alignment and structure
>1ddg_A Sulfite reductase (NADPH) flavoprotein alpha- component; cytochrome P450 reductase, FNR, modular protein, oxidoreductase; HET: FAD; 2.01A {Escherichia coli} SCOP: b.43.4.1 c.25.1.4 PDB: 1ddi_A* Back     alignment and structure
>1tll_A Nitric-oxide synthase, brain; reductase module, FMN, FAD, NADP+, oxidoreductase; HET: FMN FAD NAP; 2.30A {Rattus norvegicus} SCOP: b.43.4.1 c.23.5.2 c.25.1.4 Back     alignment and structure
>1fnb_A Ferredoxin-NADP+ reductase; oxidoreductase (NADP+(A),ferredoxin(A)); HET: FAD; 1.70A {Spinacia oleracea} SCOP: b.43.4.2 c.25.1.1 PDB: 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 1qg0_A* 1qga_A* 1qfz_A* 1qfy_A* 1gaw_A* 1gaq_A* 3mhp_A* 1sm4_A* 2xnc_A* Back     alignment and structure
>2bmw_A Ferredoxin--NADP reductase; oxidoreductase, flavoprotein, FAD, FNR, reductase reductase, phycobilisome, thylakoid; HET: FAD; 1.5A {Anabaena SP} SCOP: b.43.4.2 c.25.1.1 PDB: 1h42_A* 2vyq_A* 2vzl_A* 1ogi_A* 1ogj_A* 1gjr_A* 1e62_A* 1e64_A* 1quf_A* 1e63_A* 1go2_A* 1w34_A* 1b2r_A* 1w35_A* 1w87_A* 1que_A* 1ewy_A* 1gr1_A* 2bsa_A* 1bqe_A* ... Back     alignment and structure
>3vo2_A Putative uncharacterized protein; rossmann fold, oxidoreductase, FAD binding; HET: FAD; 1.39A {Zea mays} PDB: 3vo1_A* 1gaw_A* 1gaq_A* 1qg0_A* 4af6_A* 1qga_A* 1qfz_A* 1qfy_A* 4af7_A* 1sm4_A* 3mhp_A* 1fnb_A* 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 2xnc_A* Back     alignment and structure
>2b5o_A FNR, ferredoxin--NADP reductase; complex with FAD, oxidoreductase; HET: FAD; 2.50A {Synechococcus SP} Back     alignment and structure
>2rc5_A Ferredoxin-NADP reductase; FAD, oxidoreductase; HET: FAD; 2.43A {Leptospira interrogans} PDB: 2rc6_A* Back     alignment and structure
>3lo8_A Ferredoxin--NADP reductase; electron transport, oxidoreductase, FAD, flavoprotein; HET: FAD; 1.05A {Zea mays} PDB: 3lvb_A* 1jb9_A* Back     alignment and structure
>3jqq_A Ferredoxin NADP reductase; FAD, oxidoreductase; HET: FAD A2P; 2.20A {Plasmodium falciparum} PDB: 2ok8_A* 2ok7_A* 3jqr_A* 3jqp_A* Back     alignment and structure
>1tvc_A Methane monooxygenase component C, methane monooxygenase; FAD-binding, NADH-binding, oxidoreductase; HET: FDA; NMR {Methylococcus capsulatus} SCOP: b.43.4.2 c.25.1.2 Back     alignment and structure
>2r6h_A NADH:ubiquinone oxidoreductase, Na translocating, subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: FAD; 2.95A {Porphyromonas gingivalis} Back     alignment and structure
>1qfj_A Protein (flavin reductase); riboflavin, ferredoxin reductase superfami oxidoreductase; 2.20A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1 Back     alignment and structure
>1fdr_A Flavodoxin reductase; ferredoxin reductase, flavin, oxidoreductase, flavoprotein; HET: FAD; 1.70A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1 PDB: 2xnj_A* 3fpk_A* Back     alignment and structure
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2 Back     alignment and structure
>2eix_A NADH-cytochrome B5 reductase; flavoprotein, FAD-binding domain, NADH-binding, oxidoreducta; HET: FAD; 1.56A {Physarum polycephalum} Back     alignment and structure
>1umk_A B5R, NADH-cytochrome B5 reductase; flavoprotein, beta barrel, FAD-binding domain, NADH-binding domain, oxidoreductase; HET: FAD; 1.75A {Homo sapiens} SCOP: b.43.4.2 c.25.1.1 PDB: 1ndh_A* 1i7p_A* 1ib0_A* 1qx4_A* Back     alignment and structure
>4eh1_A Flavohemoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: FAD; 2.20A {Vibrio cholerae o1 biovar el tor} Back     alignment and structure
>4fk8_A Ferredoxin--NADP reductase; ssgcid, NIH, niaid, structural genomics, national institute allergy and infectious diseases; HET: FAD; 2.10A {Burkholderia thailandensis} PDB: 4f7d_A* Back     alignment and structure
>2bgi_A Ferredoxin-NADP(H) reductase; ferredoxin(flavodoxin)-NADP(H) reductase, flavoproteins, electron transfer, oxidoreductase; HET: FAD HTG; 1.68A {Rhodobacter capsulatus} PDB: 2bgj_A* 2vnh_A* 2vni_A* 2vnj_A* 2vnk_A* Back     alignment and structure
>2qdx_A Ferredoxin reductase; oxidoreductase; HET: FAD; 1.55A {Pseudomonas aeruginosa} PDB: 3crz_A* 1a8p_A* Back     alignment and structure
>1gvh_A Flavohemoprotein; oxidoreductase, NADP, heme, flavoprotein, FAD, iron transpor; HET: FAD HEM; 2.19A {Escherichia coli} SCOP: a.1.1.2 b.43.4.2 c.25.1.5 Back     alignment and structure
>4g1v_A Flavohemoglobin; three domains: globin fold, antiparallel beta-barrel, alpha/ fold, RESP., FAD, oxidoreductase; HET: HEM FAD; 2.10A {Saccharomyces cerevisiae} PDB: 4g1b_A* Back     alignment and structure
>2cnd_A NADH-dependent nitrate reductase; nitrate assimilating enzyme, oxidoreductase, nitrogenous acceptor; HET: FAD; 2.50A {Zea mays} SCOP: b.43.4.2 c.25.1.1 PDB: 1cnf_A* 1cne_A* Back     alignment and structure
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B* Back     alignment and structure
>1cqx_A Flavohemoprotein; globin fold, six-stranded antiparallel beta sheet, helix-FLA five-stranded parallel beta sheet, lipid binding protein; HET: HEM FAD DGG; 1.75A {Cupriavidus necator} SCOP: a.1.1.2 b.43.4.2 c.25.1.5 PDB: 3ozu_A* 3ozv_B* 3ozw_A* Back     alignment and structure
>2pia_A Phthalate dioxygenase reductase; HET: FMN; 2.00A {Burkholderia cepacia} SCOP: b.43.4.2 c.25.1.2 d.15.4.2 Back     alignment and structure
>2gpj_A Siderophore-interacting protein; structural genomics, joint for structural genomics, JCSG; HET: FAD; 2.20A {Shewanella putrefaciens} Back     alignment and structure
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus} Back     alignment and structure
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus} Back     alignment and structure
>3a1f_A Cytochrome B-245 heavy chain; GP91(PHOX), NADPH binding domain, oxidoreductase; 2.00A {Homo sapiens} Back     alignment and structure
>3lo8_A Ferredoxin--NADP reductase; electron transport, oxidoreductase, FAD, flavoprotein; HET: FAD; 1.05A {Zea mays} PDB: 3lvb_A* 1jb9_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 443
d1ja1a1279 b.43.4.1 (A:240-518) NADPH-cytochrome p450 reducta 4e-61
d1f20a1270 b.43.4.1 (A:963-1232) Neuronal nitric-oxide syntha 2e-57
d1ddga1221 b.43.4.1 (A:226-446) Sulfite reductase flavoprotei 1e-44
d1ja1a3160 c.25.1.4 (A:519-678) NADPH-cytochrome p450 reducta 1e-42
d1ddga2153 c.25.1.4 (A:447-599) Sulfite reductase flavoprotei 3e-34
d1f20a2165 c.25.1.4 (A:1233-1397) Neuronal nitric-oxide synth 1e-32
d1jb9a2154 c.25.1.1 (A:163-316) Ferredoxin reductase (flavodo 1e-27
d1fnda2160 c.25.1.1 (A:155-314) Ferredoxin reductase (flavodo 7e-27
d2bmwa2162 c.25.1.1 (A:142-303) Ferredoxin reductase (flavodo 2e-22
d1jb9a1157 b.43.4.2 (A:6-162) Ferredoxin reductase (flavodoxi 3e-12
d1a8pa2158 c.25.1.1 (A:101-258) Ferredoxin reductase (flavodo 3e-12
d1gvha3143 c.25.1.5 (A:254-396) Flavohemoglobin, C-terminal d 8e-10
d1cqxa3142 c.25.1.5 (A:262-403) Flavohemoglobin, C-terminal d 2e-09
d1fdra2148 c.25.1.1 (A:101-248) Ferredoxin reductase (flavodo 4e-09
d2cnda2146 c.25.1.1 (A:125-270) Nitrate reductase {Corn (Zea 6e-08
d1fnda1136 b.43.4.2 (A:19-154) Ferredoxin reductase (flavodox 6e-08
d1fnda1136 b.43.4.2 (A:19-154) Ferredoxin reductase (flavodox 7e-04
d1tvca2141 c.25.1.2 (A:111-251) Methane monooxygenase compone 1e-06
d1krha2133 c.25.1.2 (A:206-338) Benzoate dioxygenase reductas 1e-06
d1qfja2135 c.25.1.1 (A:98-232) NAD(P)H:flavin oxidoreductase 1e-06
d1umka2147 c.25.1.1 (A:154-300) cytochrome b5 reductase {Huma 4e-06
d2bmwa1133 b.43.4.2 (A:9-141) Ferredoxin reductase (flavodoxi 7e-05
d1ep3b2160 c.25.1.3 (B:103-262) Dihydroorotate dehydrogenase 7e-05
d2piaa2120 c.25.1.2 (A:104-223) Phthalate dioxygenase reducta 1e-04
>d1ja1a1 b.43.4.1 (A:240-518) NADPH-cytochrome p450 reductase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 279 Back     information, alignment and structure

class: All beta proteins
fold: Reductase/isomerase/elongation factor common domain
superfamily: Riboflavin synthase domain-like
family: NADPH-cytochrome p450 reductase FAD-binding domain-like
domain: NADPH-cytochrome p450 reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  198 bits (504), Expect = 4e-61
 Identities = 62/246 (25%), Positives = 119/246 (48%), Gaps = 12/246 (4%)

Query: 39  YNNKAVCFLKMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTF 98
           ++ K      +  N+ L + G+ + + H E +   + I YE GD + + P+ D A V+  
Sbjct: 37  FDAKNPFLAAVTANRKLNQ-GTERHLMHLELDISDSKIRYESGDHVAVYPANDSALVNQI 95

Query: 99  IQRCNLDPDALITVQHKEMKNYLPDIHKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVM 158
            +    D D ++++ + + ++       +    P   RT +   +D+T+  PR      +
Sbjct: 96  GEILGADLDVIMSLNNLDEESNKK----HPFPCPTTYRTALTYYLDITN-PPRTNVLYEL 150

Query: 159 SYFATAEHEKERLQYFASPEG--RDDLYKYNQKERRTVLEVLEDFPSVQMPIDWLVQLVP 216
           + +A+   E+E L   AS  G  ++    +  + RR +L +L+D+PS++ PID L +L+P
Sbjct: 151 AQYASEPSEQEHLHKMASSSGEGKELYLSWVVEARRHILAILQDYPSLRPPIDHLCELLP 210

Query: 217 PLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDP----QQGIYI 272
            L+ R ++I+SS   HPN VH+    V +     R   G+ + WL   +P         +
Sbjct: 211 RLQARYYAIASSSKVHPNSVHICAVAVEYEAKSGRVNKGVATSWLRAKEPAGENGGRALV 270

Query: 273 PAWFQK 278
           P + +K
Sbjct: 271 PMFVRK 276
>d1f20a1 b.43.4.1 (A:963-1232) Neuronal nitric-oxide synthase FAD/NADP+ domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 270 Back     information, alignment and structure
>d1ddga1 b.43.4.1 (A:226-446) Sulfite reductase flavoprotein {Escherichia coli [TaxId: 562]} Length = 221 Back     information, alignment and structure
>d1ja1a3 c.25.1.4 (A:519-678) NADPH-cytochrome p450 reductase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 160 Back     information, alignment and structure
>d1ddga2 c.25.1.4 (A:447-599) Sulfite reductase flavoprotein {Escherichia coli [TaxId: 562]} Length = 153 Back     information, alignment and structure
>d1f20a2 c.25.1.4 (A:1233-1397) Neuronal nitric-oxide synthase FAD/NADP+ domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 165 Back     information, alignment and structure
>d1jb9a2 c.25.1.1 (A:163-316) Ferredoxin reductase (flavodoxin reductase) {Maize (Zea mays), root isoform [TaxId: 4577]} Length = 154 Back     information, alignment and structure
>d1fnda2 c.25.1.1 (A:155-314) Ferredoxin reductase (flavodoxin reductase) {Spinach (Spinacia oleracea) [TaxId: 3562]} Length = 160 Back     information, alignment and structure
>d2bmwa2 c.25.1.1 (A:142-303) Ferredoxin reductase (flavodoxin reductase) {Cyanobacterium (Anabaena sp.), pcc 7119 [TaxId: 1167]} Length = 162 Back     information, alignment and structure
>d1jb9a1 b.43.4.2 (A:6-162) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Maize (Zea mays), root isoform [TaxId: 4577]} Length = 157 Back     information, alignment and structure
>d1a8pa2 c.25.1.1 (A:101-258) Ferredoxin reductase (flavodoxin reductase) {Azotobacter vinelandii [TaxId: 354]} Length = 158 Back     information, alignment and structure
>d1gvha3 c.25.1.5 (A:254-396) Flavohemoglobin, C-terminal domain {Escherichia coli [TaxId: 562]} Length = 143 Back     information, alignment and structure
>d1cqxa3 c.25.1.5 (A:262-403) Flavohemoglobin, C-terminal domain {Alcaligenes eutrophus [TaxId: 106590]} Length = 142 Back     information, alignment and structure
>d1fdra2 c.25.1.1 (A:101-248) Ferredoxin reductase (flavodoxin reductase) {Escherichia coli [TaxId: 562]} Length = 148 Back     information, alignment and structure
>d2cnda2 c.25.1.1 (A:125-270) Nitrate reductase {Corn (Zea mays) [TaxId: 4577]} Length = 146 Back     information, alignment and structure
>d1fnda1 b.43.4.2 (A:19-154) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Spinach (Spinacia oleracea) [TaxId: 3562]} Length = 136 Back     information, alignment and structure
>d1fnda1 b.43.4.2 (A:19-154) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Spinach (Spinacia oleracea) [TaxId: 3562]} Length = 136 Back     information, alignment and structure
>d1tvca2 c.25.1.2 (A:111-251) Methane monooxygenase component C, MmoC {Methylococcus capsulatus [TaxId: 414]} Length = 141 Back     information, alignment and structure
>d1krha2 c.25.1.2 (A:206-338) Benzoate dioxygenase reductase {Acinetobacter sp. [TaxId: 472]} Length = 133 Back     information, alignment and structure
>d1qfja2 c.25.1.1 (A:98-232) NAD(P)H:flavin oxidoreductase {Escherichia coli [TaxId: 562]} Length = 135 Back     information, alignment and structure
>d1umka2 c.25.1.1 (A:154-300) cytochrome b5 reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 147 Back     information, alignment and structure
>d2bmwa1 b.43.4.2 (A:9-141) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Cyanobacterium (Anabaena sp.), pcc 7119 [TaxId: 1167]} Length = 133 Back     information, alignment and structure
>d1ep3b2 c.25.1.3 (B:103-262) Dihydroorotate dehydrogenase B, PyrK subunit {Lactococcus lactis, isozyme B [TaxId: 1358]} Length = 160 Back     information, alignment and structure
>d2piaa2 c.25.1.2 (A:104-223) Phthalate dioxygenase reductase {Pseudomonas cepacia, db01 [TaxId: 292]} Length = 120 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query443
d1ja1a1279 NADPH-cytochrome p450 reductase {Rat (Rattus norve 100.0
d1f20a1270 Neuronal nitric-oxide synthase FAD/NADP+ domain {R 100.0
d1ddga1221 Sulfite reductase flavoprotein {Escherichia coli [ 100.0
d1ja1a3160 NADPH-cytochrome p450 reductase {Rat (Rattus norve 100.0
d1ddga2153 Sulfite reductase flavoprotein {Escherichia coli [ 100.0
d1f20a2165 Neuronal nitric-oxide synthase FAD/NADP+ domain {R 100.0
d1fnda2160 Ferredoxin reductase (flavodoxin reductase) {Spina 99.97
d1jb9a2154 Ferredoxin reductase (flavodoxin reductase) {Maize 99.97
d2bmwa2162 Ferredoxin reductase (flavodoxin reductase) {Cyano 99.95
d1tvca2141 Methane monooxygenase component C, MmoC {Methyloco 99.88
d1krha2133 Benzoate dioxygenase reductase {Acinetobacter sp. 99.87
d1fdra2148 Ferredoxin reductase (flavodoxin reductase) {Esche 99.84
d1qfja2135 NAD(P)H:flavin oxidoreductase {Escherichia coli [T 99.82
d1jb9a1157 Ferredoxin reductase (flavodoxin reductase) N-term 99.81
d1gvha3143 Flavohemoglobin, C-terminal domain {Escherichia co 99.8
d2piaa2120 Phthalate dioxygenase reductase {Pseudomonas cepac 99.78
d1cqxa3142 Flavohemoglobin, C-terminal domain {Alcaligenes eu 99.78
d1umka2147 cytochrome b5 reductase {Human (Homo sapiens) [Tax 99.76
d2cnda2146 Nitrate reductase {Corn (Zea mays) [TaxId: 4577]} 99.75
d1a8pa2158 Ferredoxin reductase (flavodoxin reductase) {Azoto 99.71
d1fnda1136 Ferredoxin reductase (flavodoxin reductase) N-term 99.69
d2bmwa1133 Ferredoxin reductase (flavodoxin reductase) N-term 99.64
d1ep3b2160 Dihydroorotate dehydrogenase B, PyrK subunit {Lact 99.56
d1fdra199 Ferredoxin reductase (flavodoxin reductase) N-term 98.47
d1qfja197 NAD(P)H:flavin oxidoreductase {Escherichia coli [T 98.37
d1a8pa199 Ferredoxin reductase (flavodoxin reductase) N-term 98.33
d1krha1100 Benzoate dioxygenase reductase {Acinetobacter sp. 98.21
d2piaa1103 Phthalate dioxygenase reductase {Pseudomonas cepac 98.16
d2cnda1114 Nitrate reductase core domain {Corn (Zea mays) [Ta 98.16
d1cqxa2111 Flavohemoglobin, central domain {Alcaligenes eutro 98.15
d1gvha2107 Flavohemoglobin, central domain {Escherichia coli 98.1
d1tvca1109 Methane monooxygenase component C, MmoC {Methyloco 98.08
d1ep3b1101 Dihydroorotate dehydrogenase B, PyrK subunit {Lact 97.98
d1umka1124 cytochrome b5 reductase {Human (Homo sapiens) [Tax 97.81
>d1ja1a1 b.43.4.1 (A:240-518) NADPH-cytochrome p450 reductase {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
class: All beta proteins
fold: Reductase/isomerase/elongation factor common domain
superfamily: Riboflavin synthase domain-like
family: NADPH-cytochrome p450 reductase FAD-binding domain-like
domain: NADPH-cytochrome p450 reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.2e-49  Score=384.94  Aligned_cols=234  Identities=28%  Similarity=0.531  Sum_probs=214.2

Q ss_pred             cccCccce-eEEEeeeecCCCCCCcEEEEEEEecCCCcccCCCCEEEEccCCCHHHHHHHHHHcCCCCCceEEEeeCCcc
Q 013425           40 NNKAVCFL-KMIKNQPLTKSGSGKDVHHFEFEFVSAAIEYEVGDVLEILPSQDPAAVDTFIQRCNLDPDALITVQHKEMK  118 (443)
Q Consensus        40 ~~~~~~~~-~v~~~~~Lt~~~~~~~v~~i~l~~~~~~~~y~~GD~l~I~p~N~~~~V~~~l~~l~l~~~~~v~i~~~~~~  118 (443)
                      .+..++|. +|++|++|++ ++.|+++||+||+++++++|+|||+|+|+|+|+++.|+++|++||+++++.|++......
T Consensus        37 y~~~nP~~A~v~~n~~L~~-~s~k~~~Hie~dl~~s~l~Y~~GD~l~V~P~N~~~~V~~~l~~lgl~~d~~v~~~~~~~~  115 (279)
T d1ja1a1          37 FDAKNPFLAAVTANRKLNQ-GTERHLMHLELDISDSKIRYESGDHVAVYPANDSALVNQIGEILGADLDVIMSLNNLDEE  115 (279)
T ss_dssp             CBTTBCEEEEEEEEEECCS-SSSSCEEEEEEECTTSCCCCCTTCEEEECCCCCHHHHHHHHHHTTCCTTCEEEEEESCTT
T ss_pred             CCCCCCEEeEEEEEEEeCC-CCCccEEEEEEEcCCCCceecCCCEEEEEeCCCHHHHHHHHHHcCCCCceEEEeccCCCc
Confidence            34557888 9999999995 567999999999998899999999999999999999999999999999999999765433


Q ss_pred             CCCCccccCCCCCcchHHHHHHHccccCCCCCCHHHHHHHHHhccChhHHHHHHhhcCC--CChHHHHHHHHhcCCCHHH
Q 013425          119 NYLPDIHKNTTEVPIKLRTFVELTMDVTSASPRRYFFEVMSYFATAEHEKERLQYFASP--EGRDDLYKYNQKERRTVLE  196 (443)
Q Consensus       119 ~~~~~~~~~~~~~~~tl~~ll~~~~Dl~~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~--~~~~~~~~~~~~~~~~l~d  196 (443)
                      ...    ..+++.++|++++|++|+||++ +|++.||+.||.||+|+.+|++|+.|++.  ++.+.|.+|+.+++++++|
T Consensus       116 ~~~----~~p~p~~~tl~~lL~~~~Di~~-~p~k~~l~~La~~a~~~~~k~~L~~l~~~~~~~~~~y~~~~~~~~~~ild  190 (279)
T d1ja1a1         116 SNK----KHPFPCPTTYRTALTYYLDITN-PPRTNVLYELAQYASEPSEQEHLHKMASSSGEGKELYLSWVVEARRHILA  190 (279)
T ss_dssp             CSC----CCSSSSSEEHHHHHHHTBCCSS-CCCHHHHHHHGGGBCSHHHHHHHHGGGCSSSHHHHHHHHHTTTTTCCHHH
T ss_pred             ccc----ccCCCCchhHHHHHHhhccccC-CCcHHHHHHHHHHcCChHHHHHHHHHhcCcHHHHHHHHHHHHhcCCCHHH
Confidence            222    3357899999999999999999 99999999999999999999999999875  4678899999999999999


Q ss_pred             HHhhCCCCCCCHHHHHHhcCCCCcceeecCCCCCCCCCeEEEEEEEEEecCCCCcccCCcccccccCCCCCCCc------
Q 013425          197 VLEDFPSVQMPIDWLVQLVPPLKTRAFSISSSPLAHPNQVHLTVSVVSWTTPYKRKRTGLCSVWLAGLDPQQGI------  270 (443)
Q Consensus       197 ~L~~f~s~~~p~~~ll~~lp~~~pR~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~~G~~S~~L~~l~~~~G~------  270 (443)
                      +|.+||++++|+++|++.+|+++||+|||||+|..+|++++|||++|+|++..++.+.|+||+||+++.+  |+      
T Consensus       191 lL~~fps~~~pl~~ll~~lp~L~PR~YSISSSp~~~p~~v~ltv~vV~y~~~~g~~r~GvcS~~L~~l~~--~~~~~~~~  268 (279)
T d1ja1a1         191 ILQDYPSLRPPIDHLCELLPRLQARYYAIASSSKVHPNSVHICAVAVEYEAKSGRVNKGVATSWLRAKEP--AGENGGRA  268 (279)
T ss_dssp             HHHHSTTBCCCHHHHHHHSCBCCCEEEECCSCTTTCTTEEEEEEECCEEECTTSSEEECHHHHHHHHCCC--CSTTSSCC
T ss_pred             HHhhCcccCCCHHHHHHhCccCCCceeeEecCcccCCCEEEEEEEEEEeecCCCCcccccchHHHhhcCC--CCCcCCce
Confidence            9999999999999999999999999999999999999999999999999998889999999999998877  55      


Q ss_pred             EEEEEeecCCC
Q 013425          271 YIPAWFQKGSL  281 (443)
Q Consensus       271 ~v~i~~~~g~F  281 (443)
                      .|+|+++.++|
T Consensus       269 ~vpifir~s~F  279 (279)
T d1ja1a1         269 LVPMFVRKSQF  279 (279)
T ss_dssp             EEEEEEECCSC
T ss_pred             EEEEEEcCCCC
Confidence            69999998887
>d1f20a1 b.43.4.1 (A:963-1232) Neuronal nitric-oxide synthase FAD/NADP+ domain {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1ddga1 b.43.4.1 (A:226-446) Sulfite reductase flavoprotein {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ja1a3 c.25.1.4 (A:519-678) NADPH-cytochrome p450 reductase {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1ddga2 c.25.1.4 (A:447-599) Sulfite reductase flavoprotein {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1f20a2 c.25.1.4 (A:1233-1397) Neuronal nitric-oxide synthase FAD/NADP+ domain {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1fnda2 c.25.1.1 (A:155-314) Ferredoxin reductase (flavodoxin reductase) {Spinach (Spinacia oleracea) [TaxId: 3562]} Back     information, alignment and structure
>d1jb9a2 c.25.1.1 (A:163-316) Ferredoxin reductase (flavodoxin reductase) {Maize (Zea mays), root isoform [TaxId: 4577]} Back     information, alignment and structure
>d2bmwa2 c.25.1.1 (A:142-303) Ferredoxin reductase (flavodoxin reductase) {Cyanobacterium (Anabaena sp.), pcc 7119 [TaxId: 1167]} Back     information, alignment and structure
>d1tvca2 c.25.1.2 (A:111-251) Methane monooxygenase component C, MmoC {Methylococcus capsulatus [TaxId: 414]} Back     information, alignment and structure
>d1krha2 c.25.1.2 (A:206-338) Benzoate dioxygenase reductase {Acinetobacter sp. [TaxId: 472]} Back     information, alignment and structure
>d1fdra2 c.25.1.1 (A:101-248) Ferredoxin reductase (flavodoxin reductase) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1qfja2 c.25.1.1 (A:98-232) NAD(P)H:flavin oxidoreductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1jb9a1 b.43.4.2 (A:6-162) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Maize (Zea mays), root isoform [TaxId: 4577]} Back     information, alignment and structure
>d1gvha3 c.25.1.5 (A:254-396) Flavohemoglobin, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2piaa2 c.25.1.2 (A:104-223) Phthalate dioxygenase reductase {Pseudomonas cepacia, db01 [TaxId: 292]} Back     information, alignment and structure
>d1cqxa3 c.25.1.5 (A:262-403) Flavohemoglobin, C-terminal domain {Alcaligenes eutrophus [TaxId: 106590]} Back     information, alignment and structure
>d1umka2 c.25.1.1 (A:154-300) cytochrome b5 reductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2cnda2 c.25.1.1 (A:125-270) Nitrate reductase {Corn (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1a8pa2 c.25.1.1 (A:101-258) Ferredoxin reductase (flavodoxin reductase) {Azotobacter vinelandii [TaxId: 354]} Back     information, alignment and structure
>d1fnda1 b.43.4.2 (A:19-154) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Spinach (Spinacia oleracea) [TaxId: 3562]} Back     information, alignment and structure
>d2bmwa1 b.43.4.2 (A:9-141) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Cyanobacterium (Anabaena sp.), pcc 7119 [TaxId: 1167]} Back     information, alignment and structure
>d1ep3b2 c.25.1.3 (B:103-262) Dihydroorotate dehydrogenase B, PyrK subunit {Lactococcus lactis, isozyme B [TaxId: 1358]} Back     information, alignment and structure
>d1fdra1 b.43.4.2 (A:2-100) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1qfja1 b.43.4.2 (A:1-97) NAD(P)H:flavin oxidoreductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1a8pa1 b.43.4.2 (A:2-100) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Azotobacter vinelandii [TaxId: 354]} Back     information, alignment and structure
>d1krha1 b.43.4.2 (A:106-205) Benzoate dioxygenase reductase {Acinetobacter sp. [TaxId: 472]} Back     information, alignment and structure
>d2piaa1 b.43.4.2 (A:1-103) Phthalate dioxygenase reductase {Pseudomonas cepacia, db01 [TaxId: 292]} Back     information, alignment and structure
>d2cnda1 b.43.4.2 (A:11-124) Nitrate reductase core domain {Corn (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1cqxa2 b.43.4.2 (A:151-261) Flavohemoglobin, central domain {Alcaligenes eutrophus [TaxId: 106590]} Back     information, alignment and structure
>d1gvha2 b.43.4.2 (A:147-253) Flavohemoglobin, central domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1tvca1 b.43.4.2 (A:2-110) Methane monooxygenase component C, MmoC {Methylococcus capsulatus [TaxId: 414]} Back     information, alignment and structure
>d1ep3b1 b.43.4.2 (B:2-102) Dihydroorotate dehydrogenase B, PyrK subunit {Lactococcus lactis, isozyme B [TaxId: 1358]} Back     information, alignment and structure
>d1umka1 b.43.4.2 (A:30-153) cytochrome b5 reductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure