Citrus Sinensis ID: 013571

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440
MYLMLLARLCLLIIVSTIFTCNPTWAKKETQSGSEQLSSLTRELLDSAREPEFFEWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSGGEPWFGLRAEMDALPLQEMVEWEHKSKNNGKMHGCGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGYGGAYYMIKEGAVDKFQGMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLDNLEVEVQ
cHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHccccEEEcccccEEEEEEccccccEEEEEcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccccEEEEEccccccccccHHHHHHccccccccEEEEEccccccccEEEEEccccccccccEEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEEccccccccccEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEcccccccccccccHHHHHHHHHHHHHHccccccccccccccccHHHHHHcccccEEEEEEccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcc
cHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHcccEEEccccccEEEEEEccccccEEEEEEcccccccHHcccccccccccccEEccccHHHHHHHHHHHHHHHHHHHHcccEEEEEEcccccccccHHHHHHccccccccEEEEEEcccccccEEEEEccccEEEccccEEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHccccccccEEEEEEEEEcccccccccccEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEcccccccccccccHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHcccEEEEEEccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccc
MYLMLLARLCLLIIVSTIftcnptwakketqsgseQLSSLTRELLDSAREPEFFEWMRRIRRRIhenpelgfeeyeTSQLVRSELDSlgieytwpvaktgivasvgsggepwfglraemdalplQEMVEWEHksknngkmhgcghdVHTTILLGAARLLKHRMDRLKGTVKlvfqpgeegyggayYMIKEGAVDkfqgmfgihispvlptgtvgsrpgpllagsgrFTAVIkgkgghaampqdtrdPVLAASFAILTLQHIVSRETDPLEARVVTVGfidagqagniipeivrfggtfrslTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMrhypatvndekmyehgkrvgasmvgepnvhltpvemgaedfsfytqrmpaahfyvgtrnetlkpfirlhspylvvdedalpIGAALHAAVAISYLdnlevevq
MYLMLLARLCLLIIVSTIFTCNPTWAkketqsgseqlSSLTRelldsarepefFEWMRRIRRRIHenpelgfeeyeTSQLVRSELDSLGIEYTWPVAKTGIVASVGSGGEPWFGLRAEMDALPLQEMVEWEHKSKNNGKMHGCGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGYGGAYYMIKEGAVDKFQGMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGfidagqagniiPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLDNLEVEVQ
MYlmllarlcllIIVSTIFTCNPTWAKKETQSGSEQLSSLTRELLDSAREPEFFEWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSGGEPWFGLRAEMDALPLQEMVEWEHKSKNNGKMHGCGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGYGGAYYMIKEGAVDKFQGMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLDNLEVEVQ
*YLMLLARLCLLIIVSTIFTCNPTWA*************************EFFEWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSGGEPWFGLRAEMDALPLQEMVEWEHKSKNNGKMHGCGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGYGGAYYMIKEGAVDKFQGMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGH*******RDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLDNLE****
MYLMLLARLCLLIIVSTIFTCNP*********************LDSAREPEFFEWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSGGEPWFGLRAEMDALPLQEMVEWEHKSKNNGKMHGCGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGYGGAYYMIKEGAVDKFQGMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYL*NL*****
MYLMLLARLCLLIIVSTIFTCNPTW**************LTRELLDSAREPEFFEWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSGGEPWFGLRAEMDALPLQEMVEWEHKSKNNGKMHGCGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGYGGAYYMIKEGAVDKFQGMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIK********PQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLDNLEVEVQ
MYLMLLARLCLLIIVSTIFTCNPTWAK*****GSEQLSSLTRELLDSAREPEFFEWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSGGEPWFGLRAEMDALPLQEMVEWEHKSKNNGKMHGCGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGYGGAYYMIKEGAVDKFQGMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLDNL*****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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SSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MYLMLLARLCLLIIVSTIFTCNPTWAKKETQSGSEQLSSLTRELLDSAREPEFFEWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSGGEPWFGLRAEMDALPLQEMVEWEHKSKNNGKMHGCGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGYGGAYYMIKEGAVDKFQGMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLDNLEVEVQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query440 2.2.26 [Sep-21-2011]
P54968442 IAA-amino acid hydrolase yes no 0.931 0.927 0.596 1e-146
Q851L5417 IAA-amino acid hydrolase yes no 0.886 0.935 0.596 1e-143
Q8H3C9455 IAA-amino acid hydrolase yes no 0.890 0.861 0.594 1e-139
Q851L6414 IAA-amino acid hydrolase no no 0.895 0.951 0.588 1e-138
Q8H3C8444 IAA-amino acid hydrolase no no 0.913 0.905 0.545 1e-130
Q8H3C7440 IAA-amino acid hydrolase no no 0.877 0.877 0.579 1e-129
Q8S9S4442 IAA-amino acid hydrolase no no 0.884 0.880 0.561 1e-125
Q84XG9442 IAA-amino acid hydrolase N/A no 0.884 0.880 0.558 1e-124
O04373440 IAA-amino acid hydrolase no no 0.945 0.945 0.510 1e-124
Q9SWX9435 IAA-amino acid hydrolase no no 0.936 0.947 0.503 1e-119
>sp|P54968|ILR1_ARATH IAA-amino acid hydrolase ILR1 OS=Arabidopsis thaliana GN=ILR1 PE=1 SV=2 Back     alignment and function desciption
 Score =  519 bits (1336), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 245/411 (59%), Positives = 315/411 (76%), Gaps = 1/411 (0%)

Query: 23  PTWAKKETQSGSEQLSSLTRELLDSAREPEFFEWMRRIRRRIHENPELGFEEYETSQLVR 82
           P  +     SGS  L SL R +L SA++PEFFEWMR IRR+IHENPE GF+E++TSQLVR
Sbjct: 19  PLSSAGSYDSGS-GLESLARGMLHSAKDPEFFEWMRGIRRKIHENPETGFQEFKTSQLVR 77

Query: 83  SELDSLGIEYTWPVAKTGIVASVGSGGEPWFGLRAEMDALPLQEMVEWEHKSKNNGKMHG 142
            ELDSLG++Y +PVAKTG+VA +GS  +P FGLRA+MDALPLQE+VEWE KSK +GKMH 
Sbjct: 78  DELDSLGVKYKYPVAKTGVVAWIGSCSKPVFGLRADMDALPLQELVEWESKSKVDGKMHA 137

Query: 143 CGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGYGGAYYMIKEGAVDKFQGMFGI 202
           CGHD H  +LLGAA+LL+     +KGTVKLVFQPGEEGY GAY M+K+  +D   G+  +
Sbjct: 138 CGHDTHVAMLLGAAKLLQTTKHLIKGTVKLVFQPGEEGYAGAYEMLKDEILDDLDGILSV 197

Query: 203 HISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIV 262
           H+ P +P+G +GSRPG +LAG+G FT  + G+G HAA P  ++DPVLAAS A++ LQ IV
Sbjct: 198 HVFPSIPSGGIGSRPGTVLAGAGLFTVTVHGQGSHAATPHFSKDPVLAASSAVVALQQIV 257

Query: 263 SRETDPLEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAA 322
           SRE DPLEA VVTVG+I+ G A N+IP+  +FGGTFRSL+ +GLL++++RIKE+ E QA+
Sbjct: 258 SRELDPLEAGVVTVGYIEGGHAQNVIPQSAKFGGTFRSLSNDGLLFIQRRIKEISEAQAS 317

Query: 323 VHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYT 382
           V++C A ++F E+K   +P   NDE +YEHGK+V  +M+G+ N H  PV MG EDFSF+T
Sbjct: 318 VYRCKAEVNFEEKKPSLHPVMNNDEGLYEHGKKVAEAMIGKNNFHDFPVTMGGEDFSFFT 377

Query: 383 QRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLD 433
           Q+  AA F +G +NETL     LHSPY  VDE+ALP+GAALHAA+A+SYLD
Sbjct: 378 QKTKAAIFVLGVKNETLGAGKPLHSPYFFVDEEALPVGAALHAAMAVSYLD 428
Hydrolyzes certain amino acid conjugates of the plant growth regulator indole-3-acetic acid (IAA), including IAA-Leu and IAA-Phe.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 5EC: .EC: 1EC: .EC: -
>sp|Q851L5|ILL3_ORYSJ IAA-amino acid hydrolase ILR1-like 3 OS=Oryza sativa subsp. japonica GN=ILL3 PE=2 SV=1 Back     alignment and function description
>sp|Q8H3C9|ILL7_ORYSJ IAA-amino acid hydrolase ILR1-like 7 OS=Oryza sativa subsp. japonica GN=ILL7 PE=2 SV=1 Back     alignment and function description
>sp|Q851L6|ILL4_ORYSJ IAA-amino acid hydrolase ILR1-like 4 OS=Oryza sativa subsp. japonica GN=ILL4 PE=2 SV=1 Back     alignment and function description
>sp|Q8H3C8|ILL8_ORYSJ IAA-amino acid hydrolase ILR1-like 8 OS=Oryza sativa subsp. japonica GN=ILL8 PE=2 SV=1 Back     alignment and function description
>sp|Q8H3C7|ILL9_ORYSJ IAA-amino acid hydrolase ILR1-like 9 OS=Oryza sativa subsp. japonica GN=ILL9 PE=2 SV=2 Back     alignment and function description
>sp|Q8S9S4|ILL1_ORYSJ IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sativa subsp. japonica GN=ILL1 PE=2 SV=1 Back     alignment and function description
>sp|Q84XG9|ILL1_ORYSI IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sativa subsp. indica GN=ILL1 PE=2 SV=1 Back     alignment and function description
>sp|O04373|ILL4_ARATH IAA-amino acid hydrolase ILR1-like 4 OS=Arabidopsis thaliana GN=ILL4 PE=1 SV=2 Back     alignment and function description
>sp|Q9SWX9|ILL5_ARATH IAA-amino acid hydrolase ILR1-like 5 OS=Arabidopsis thaliana GN=ILL5 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query440
269980525430 IAA-amino acid hydrolase [Populus toment 0.977 1.0 0.714 0.0
224138406478 iaa-amino acid hydrolase 4 [Populus tric 0.979 0.901 0.708 0.0
225440777420 PREDICTED: IAA-amino acid hydrolase ILR1 0.897 0.940 0.736 1e-174
255579339438 IAA-amino acid hydrolase ILR1 precursor, 0.977 0.981 0.635 1e-169
449437436433 PREDICTED: IAA-amino acid hydrolase ILR1 0.913 0.928 0.684 1e-169
225440779438 PREDICTED: IAA-amino acid hydrolase ILR1 0.920 0.924 0.671 1e-164
297740166 814 unnamed protein product [Vitis vinifera] 0.956 0.517 0.640 1e-160
359482030440 PREDICTED: IAA-amino acid hydrolase ILR1 0.931 0.931 0.655 1e-160
224088446441 iaa-amino acid hydrolase 1 [Populus tric 0.963 0.961 0.623 1e-158
224088438440 iaa-amino acid hydrolase 2 [Populus tric 0.95 0.95 0.627 1e-157
>gi|269980525|gb|ACZ56437.1| IAA-amino acid hydrolase [Populus tomentosa] Back     alignment and taxonomy information
 Score =  669 bits (1725), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/435 (71%), Positives = 373/435 (85%), Gaps = 5/435 (1%)

Query: 6   LARLCLLIIVSTIFTCNPTWAKKETQSGSEQLSSLTRELLDSAREPEFFEWMRRIRRRIH 65
           +A LCL +I+ST   C  TWA  +T+S S +LS LTRELL+SAREPEFFEW++RIRRRIH
Sbjct: 1   MAWLCLFMILST---CQTTWAL-DTRSES-KLSHLTRELLESAREPEFFEWLKRIRRRIH 55

Query: 66  ENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSGGEPWFGLRAEMDALPLQ 125
           E+PEL FEE+ TSQL+RSELDSLGIEY WP AKTG+V S+GSG +PWFGLRA+MDALP+Q
Sbjct: 56  EDPELAFEEHNTSQLIRSELDSLGIEYKWPFAKTGVVGSIGSGLQPWFGLRADMDALPIQ 115

Query: 126 EMVEWEHKSKNNGKMHGCGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGYGGAY 185
           EMVEWEHKSKNNGKMH CGHD H T+LLGAA+LL+   D LKGTVKLVFQPGEE YGGAY
Sbjct: 116 EMVEWEHKSKNNGKMHACGHDAHVTMLLGAAKLLERMKDELKGTVKLVFQPGEESYGGAY 175

Query: 186 YMIKEGAVDKFQGMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTR 245
           +MIKEGA+D FQG+FG+H++P +P GTV SRPGP+LA SGRF A IKGKGGHAA PQDTR
Sbjct: 176 HMIKEGALDNFQGIFGLHVAPEIPVGTVDSRPGPMLAASGRFIATIKGKGGHAARPQDTR 235

Query: 246 DPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEG 305
           DPV+AASFAIL LQ IVSRETDPL ARVV+VGF++AGQAGN+IPE VRFGG+ RS+TTEG
Sbjct: 236 DPVVAASFAILALQQIVSRETDPLYARVVSVGFVEAGQAGNVIPETVRFGGSVRSITTEG 295

Query: 306 LLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPN 365
           L+ L+QR+ +++EMQAAVHQC+A++DF+EEKMR YP+TVNDE MY+H K+VG +++GE N
Sbjct: 296 LVSLQQRVMQIVEMQAAVHQCTASLDFMEEKMRPYPSTVNDEAMYKHAKQVGEALLGESN 355

Query: 366 VHLTPVEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHA 425
           V L P+ MGAEDFSFY+Q+M AA F++GT+NET+K   RLHSPY V+DE+ L IGAA HA
Sbjct: 356 VLLAPMTMGAEDFSFYSQKMKAAFFFIGTKNETVKTVKRLHSPYFVIDEEVLSIGAAFHA 415

Query: 426 AVAISYLDNLEVEVQ 440
           AVAISYLD   ++ Q
Sbjct: 416 AVAISYLDRHAIDTQ 430

Source: Populus tomentosa

Species: Populus tomentosa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224138406|ref|XP_002322806.1| iaa-amino acid hydrolase 4 [Populus trichocarpa] gi|222867436|gb|EEF04567.1| iaa-amino acid hydrolase 4 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225440777|ref|XP_002275838.1| PREDICTED: IAA-amino acid hydrolase ILR1-like 3-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|255579339|ref|XP_002530514.1| IAA-amino acid hydrolase ILR1 precursor, putative [Ricinus communis] gi|223529918|gb|EEF31846.1| IAA-amino acid hydrolase ILR1 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449437436|ref|XP_004136498.1| PREDICTED: IAA-amino acid hydrolase ILR1-like 7-like [Cucumis sativus] gi|449525449|ref|XP_004169730.1| PREDICTED: IAA-amino acid hydrolase ILR1-like 7-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|225440779|ref|XP_002281507.1| PREDICTED: IAA-amino acid hydrolase ILR1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|297740166|emb|CBI30348.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359482030|ref|XP_002275866.2| PREDICTED: IAA-amino acid hydrolase ILR1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|224088446|ref|XP_002308453.1| iaa-amino acid hydrolase 1 [Populus trichocarpa] gi|222854429|gb|EEE91976.1| iaa-amino acid hydrolase 1 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224088438|ref|XP_002308452.1| iaa-amino acid hydrolase 2 [Populus trichocarpa] gi|222854428|gb|EEE91975.1| iaa-amino acid hydrolase 2 [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query440
TAIR|locus:2075382442 ILR1 "AT3G02875" [Arabidopsis 0.954 0.950 0.589 6.9e-134
TAIR|locus:2017607440 IAR3 "AT1G51760" [Arabidopsis 0.911 0.911 0.535 1.5e-113
TAIR|locus:2017577435 ILL5 "AT1G51780" [Arabidopsis 0.902 0.912 0.528 3e-108
TAIR|locus:2164976439 ILL2 "AT5G56660" [Arabidopsis 0.895 0.897 0.513 1.9e-106
TAIR|locus:2165076438 ILL1 "AT5G56650" [Arabidopsis 0.888 0.892 0.507 7.5e-105
TAIR|locus:2823614464 ILL6 "IAA-leucine resistant (I 0.879 0.834 0.507 1.1e-103
TAIR|locus:2166557428 ILL3 "AT5G54140" [Arabidopsis 0.859 0.883 0.514 4.5e-98
TIGR_CMR|SPO_2468387 SPO_2468 "amidohydrolase famil 0.838 0.953 0.375 1.9e-58
UNIPROTKB|Q5HUH5383 hipO "Hippurate hydrolase" [Ca 0.854 0.981 0.363 1.4e-57
TIGR_CMR|CJE_1067383 CJE_1067 "hippurate hydrolase" 0.854 0.981 0.363 1.4e-57
TAIR|locus:2075382 ILR1 "AT3G02875" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1312 (466.9 bits), Expect = 6.9e-134, P = 6.9e-134
 Identities = 248/421 (58%), Positives = 319/421 (75%)

Query:    13 IIVSTIFTCNPTWAKKETQSGSEQLSSLTRELLDSAREPEFFEWMRRIRRRIHENPELGF 72
             +I  T F   P  +     SGS  L SL R +L SA++PEFFEWMR IRR+IHENPE GF
Sbjct:     9 VIFVTFFFLPPLSSAGSYDSGSG-LESLARGMLHSAKDPEFFEWMRGIRRKIHENPETGF 67

Query:    73 EEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSGGEPWFGLRAEMDALPLQEMVEWEH 132
             +E++TSQLVR ELDSLG++Y +PVAKTG+VA +GS  +P FGLRA+MDALPLQE+VEWE 
Sbjct:    68 QEFKTSQLVRDELDSLGVKYKYPVAKTGVVAWIGSCSKPVFGLRADMDALPLQELVEWES 127

Query:   133 KSKNNGKMHGCGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGYGGAYYMIKEGA 192
             KSK +GKMH CGHD H  +LLGAA+LL+     +KGTVKLVFQPGEEGY GAY M+K+  
Sbjct:   128 KSKVDGKMHACGHDTHVAMLLGAAKLLQTTKHLIKGTVKLVFQPGEEGYAGAYEMLKDEI 187

Query:   193 VDKFQGMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAAS 252
             +D   G+  +H+ P +P+G +GSRPG +LAG+G FT  + G+G HAA P  ++DPVLAAS
Sbjct:   188 LDDLDGILSVHVFPSIPSGGIGSRPGTVLAGAGLFTVTVHGQGSHAATPHFSKDPVLAAS 247

Query:   253 FAILTLQHIVSRETDPLEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQR 312
              A++ LQ IVSRE DPLEA VVTVG+I+ G A N+IP+  +FGGTFRSL+ +GLL++++R
Sbjct:   248 SAVVALQQIVSRELDPLEAGVVTVGYIEGGHAQNVIPQSAKFGGTFRSLSNDGLLFIQRR 307

Query:   313 IKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVE 372
             IKE+ E QA+V++C A ++F E+K   +P   NDE +YEHGK+V  +M+G+ N H  PV 
Sbjct:   308 IKEISEAQASVYRCKAEVNFEEKKPSLHPVMNNDEGLYEHGKKVAEAMIGKNNFHDFPVT 367

Query:   373 MGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYL 432
             MG EDFSF+TQ+  AA F +G +NETL     LHSPY  VDE+ALP+GAALHAA+A+SYL
Sbjct:   368 MGGEDFSFFTQKTKAAIFVLGVKNETLGAGKPLHSPYFFVDEEALPVGAALHAAMAVSYL 427

Query:   433 D 433
             D
Sbjct:   428 D 428
GO:0006508 "proteolysis" evidence=ISS
GO:0008152 "metabolic process" evidence=IEA
GO:0008237 "metallopeptidase activity" evidence=ISS
GO:0009507 "chloroplast" evidence=ISM
GO:0016787 "hydrolase activity" evidence=IEA
GO:0010210 "IAA-Phe conjugate hydrolase activity" evidence=IDA
GO:0010211 "IAA-Leu conjugate hydrolase activity" evidence=IDA
GO:0005783 "endoplasmic reticulum" evidence=IDA
GO:0046482 "para-aminobenzoic acid metabolic process" evidence=RCA
GO:0009850 "auxin metabolic process" evidence=IMP
TAIR|locus:2017607 IAR3 "AT1G51760" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2017577 ILL5 "AT1G51780" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2164976 ILL2 "AT5G56660" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2165076 ILL1 "AT5G56650" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2823614 ILL6 "IAA-leucine resistant (ILR)-like gene 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2166557 ILL3 "AT5G54140" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_2468 SPO_2468 "amidohydrolase family protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
UNIPROTKB|Q5HUH5 hipO "Hippurate hydrolase" [Campylobacter jejuni RM1221 (taxid:195099)] Back     alignment and assigned GO terms
TIGR_CMR|CJE_1067 CJE_1067 "hippurate hydrolase" [Campylobacter jejuni RM1221 (taxid:195099)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P80092CBPX1_SULSO3, ., 4, ., 1, 7, ., -0.36740.83860.9389yesno
Q84XG9ILL1_ORYSI3, ., 5, ., 1, ., -0.55890.88400.8800N/Ano
P58156CBPX2_SULSO3, ., 4, ., 1, 7, ., -0.37270.83860.9389yesno
Q851L5ILL3_ORYSJ3, ., 5, ., 1, ., -0.59610.88630.9352yesno
P54955YXEP_BACSU3, ., -, ., -, ., -0.35490.84770.9815yesno
P45493HIPO_CAMJE3, ., 5, ., 1, ., 3, 20.36090.85450.9817yesno
Q8H3C9ILL7_ORYSJ3, ., 5, ., 1, ., -0.59440.89090.8615yesno
P54968ILR1_ARATH3, ., 5, ., 1, ., -0.59610.93180.9276yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.5.10.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
ILL4
iaa-amino acid hydrolase 4 (403 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query440
cd08017377 cd08017, M20_IAA_Hyd, M20 Peptidase Indole-3-aceti 0.0
PLN02280478 PLN02280, PLN02280, IAA-amino acid hydrolase 1e-171
cd03886372 cd03886, M20_Acy1, M20 Peptidase Aminoacylase 1 fa 1e-169
PLN02693437 PLN02693, PLN02693, IAA-amino acid hydrolase 1e-148
COG1473392 COG1473, AbgB, Metal-dependent amidase/aminoacylas 1e-147
TIGR01891363 TIGR01891, amidohydrolases, amidohydrolase 1e-142
cd05666373 cd05666, M20_Acy1_like1, M20 Peptidase Aminoacylas 1e-140
cd08019372 cd08019, M20_Acy1_subfamily5, M20 Peptidase Aminoa 1e-130
cd05669372 cd05669, M20_Acy1_YxeP_like, M20 Peptidase Aminoac 1e-118
cd05667402 cd05667, M20_Acy1_like2, M20 Peptidase Aminoacylas 1e-112
cd08014372 cd08014, M20_Acy1_like4, M20 Peptidase Aminoacylas 1e-111
cd08660363 cd08660, M20_Acy1_like, M20 Peptidase Aminoacylase 1e-103
cd05664398 cd05664, M20_Acy1_like6, M20 Peptidase Aminoacylas 4e-97
cd05670367 cd05670, M20_Acy1_YkuR_like, M20 Peptidase Aminoac 1e-92
cd08018365 cd08018, M20_Acy1_amhX_like, M20 Peptidase Aminoac 5e-63
cd05665415 cd05665, M20_Acy1_IAAspH_bact, M20 Peptidases Amin 1e-58
pfam01546310 pfam01546, Peptidase_M20, Peptidase family M20/M25 1e-58
cd05668374 cd05668, M20_Acy1_like3, M20 Peptidase Aminoacylas 1e-49
cd03887358 cd03887, M20_Acy1L2, M20 Peptidase Aminoacylase 1- 7e-46
cd05672358 cd05672, M20_ACY1L2_like, M20 Peptidase Aminoacyla 1e-41
cd09849388 cd09849, M20_Acy1L2_like_2, M20 Peptidase Aminoacy 3e-26
cd05673434 cd05673, M20_Acy1L2_AbgB, M20 Peptidase Aminoacyla 7e-26
cd08659365 cd08659, M20_ArgE_DapE_like, Peptidase M20 acetylo 4e-20
cd03873237 cd03873, Zinc_peptidase_like, Zinc peptidases M18, 5e-19
COG0624409 COG0624, ArgE, Acetylornithine deacetylase/Succiny 2e-13
cd03884399 cd03884, M20_bAS, M20 Peptidase beta-alanine synth 1e-11
pfam07687107 pfam07687, M20_dimer, Peptidase dimerisation domai 5e-11
TIGR01910375 TIGR01910, DapE-ArgE, acetylornithine deacetylase 6e-11
PRK07338402 PRK07338, PRK07338, hypothetical protein; Provisio 7e-10
PRK09290413 PRK09290, PRK09290, allantoate amidohydrolase; Rev 1e-09
cd05683366 cd05683, M20_peptT_like, M20 Peptidase T like enzy 3e-09
cd03896359 cd03896, M20_PAAh_like, M20 Peptidases, Poly(aspar 2e-08
cd03885363 cd03885, M20_CPDG2, M20 Peptidase Glutamate carbox 2e-08
PRK08651394 PRK08651, PRK08651, succinyl-diaminopimelate desuc 7e-07
TIGR01879400 TIGR01879, hydantase, amidase, hydantoinase/carbam 8e-06
cd08011390 cd08011, M20_ArgE_DapE_like6, M20 Peptidases with 1e-05
cd03894372 cd03894, M20_ArgE, M20 Peptidase acetylornithine d 4e-05
PRK12893412 PRK12893, PRK12893, allantoate amidohydrolase; Rev 1e-04
PRK12892412 PRK12892, PRK12892, allantoate amidohydrolase; Rev 2e-04
TIGR01892364 TIGR01892, AcOrn-deacetyl, acetylornithine deacety 0.002
>gnl|CDD|193564 cd08017, M20_IAA_Hyd, M20 Peptidase Indole-3-acetic acid amino acid hydrolase Back     alignment and domain information 
 Score =  619 bits (1598), Expect = 0.0
 Identities = 240/377 (63%), Positives = 296/377 (78%)

Query: 57  MRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSGGEPWFGLR 116
           + RIRR IHENPEL FEE+ETS L+R ELD+LGI Y +PVAKTGIVA++GSG  P   LR
Sbjct: 1   LVRIRREIHENPELAFEEHETSALIRRELDALGIPYRYPVAKTGIVATIGSGSPPVVALR 60

Query: 117 AEMDALPLQEMVEWEHKSKNNGKMHGCGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQP 176
           A+MDALP+QE+VEWEHKSK +GKMH CGHD H T+LLGAA+LLK R   LKGTV+L+FQP
Sbjct: 61  ADMDALPIQELVEWEHKSKVDGKMHACGHDAHVTMLLGAAKLLKAREHLLKGTVRLLFQP 120

Query: 177 GEEGYGGAYYMIKEGAVDKFQGMFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGG 236
            EEG  GA  MIKEGA+D  + +FG+H+ P LPTGTV SRPGP+LAG+GRF AVI+GKGG
Sbjct: 121 AEEGGAGAKEMIKEGALDDVEAIFGMHVDPALPTGTVASRPGPILAGAGRFEAVIRGKGG 180

Query: 237 HAAMPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQAGNIIPEIVRFGG 296
           HAAMP  T DPVLAAS A++ LQ +VSRETDPL+++VV+V   + G A N+IP+ V FGG
Sbjct: 181 HAAMPHHTVDPVLAASSAVVALQQLVSRETDPLDSQVVSVTRFNGGHAFNVIPDSVTFGG 240

Query: 297 TFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRV 356
           T R+LTTEG   L QRI+EVIE QAAVH+C+AT+DF E++   YP TVNDE++YEH K+V
Sbjct: 241 TLRALTTEGFYRLRQRIEEVIEGQAAVHRCNATVDFSEDERPPYPPTVNDERLYEHAKKV 300

Query: 357 GASMVGEPNVHLTPVEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDA 416
            A ++G  NV + P  MGAEDF+FY +++P A F++G RNET      LHSPY  +DE+ 
Sbjct: 301 AADLLGPENVKIAPPVMGAEDFAFYAEKIPGAFFFLGIRNETAGSVHSLHSPYFFLDEEV 360

Query: 417 LPIGAALHAAVAISYLD 433
           LP+GAALHAAVA  YL+
Sbjct: 361 LPVGAALHAAVAERYLN 377

Peptidase M20 family, Plant Aminoacyclase-1 indole-3-acetic-L-aspartic acid hydrolase (IAA-Asp hydrolase; IAAspH; IAAH; IAA amidohydrolase; EC 3.5.1.-) subfamily. IAAspH hydrolyzes indole-3-acetyl-N-aspartic acid (IAA or auxin) to indole-3-acetic acid. Genes encoding IAA-amidohydrolases were first cloned from Arabidopsis; ILR1, IAR3, ILL1 and ILL2 encode active IAA- amino acid hydrolases, and three additional amidohydrolase-like genes (ILL3, ILL5, ILL6) have been isolated. In higher plants, the growth regulator indole-3-acetic acid (IAA or auxin) is found both free and conjugated via amide bonding to a variety of amino acids and peptides, and via an ester linkage to carbohydrates. IAA-Asp conjugates are involved in homeostatic control, protection, storing and subsequent use of free IAA. IAA-Asp is also found in some plants as a unique intermediate for entering into IAA non-decarboxylative oxidative pathway. IAA amidohydrolase cleaves the amide bond between the auxin and the conjugated amino acid. Enterobacter agglomerans IAAspH has very strong enzyme activity and substrate specificity towards IAA-Asp, although its substrate affinity is weaker compared to Arabidopsis enzymes of the ILR1 gene family. Enhanced IAA-hydrolase activity has been observed during clubroot disease in Chinese cabbage. Length = 377
>gnl|CDD|215158 PLN02280, PLN02280, IAA-amino acid hydrolase Back     alignment and domain information
>gnl|CDD|193507 cd03886, M20_Acy1, M20 Peptidase Aminoacylase 1 family Back     alignment and domain information
>gnl|CDD|178296 PLN02693, PLN02693, IAA-amino acid hydrolase Back     alignment and domain information
>gnl|CDD|224390 COG1473, AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only] Back     alignment and domain information
>gnl|CDD|233621 TIGR01891, amidohydrolases, amidohydrolase Back     alignment and domain information
>gnl|CDD|193542 cd05666, M20_Acy1_like1, M20 Peptidase Aminoacylase 1 subfamily Back     alignment and domain information
>gnl|CDD|193566 cd08019, M20_Acy1_subfamily5, M20 Peptidase Aminoacylase 1 subfamily Back     alignment and domain information
>gnl|CDD|193545 cd05669, M20_Acy1_YxeP_like, M20 Peptidase Aminoacyclase-1 YxeP-like proteins, including YxeP, YtnL, YjiB and HipO2 Back     alignment and domain information
>gnl|CDD|193543 cd05667, M20_Acy1_like2, M20 Peptidase Aminoacylase 1 subfamily Back     alignment and domain information
>gnl|CDD|193562 cd08014, M20_Acy1_like4, M20 Peptidase Aminoacylase 1 subfamily Back     alignment and domain information
>gnl|CDD|193571 cd08660, M20_Acy1_like, M20 Peptidase Aminoacylase 1-like family Back     alignment and domain information
>gnl|CDD|193540 cd05664, M20_Acy1_like6, M20 Peptidase Aminoacylase 1 subfamily Back     alignment and domain information
>gnl|CDD|193546 cd05670, M20_Acy1_YkuR_like, M20 Peptidase Aminoacyclase-1 YkuR-like proteins, including YkuR and Ama/HipO/HyuC proteins Back     alignment and domain information
>gnl|CDD|193565 cd08018, M20_Acy1_amhX_like, M20 Peptidase Aminoacylase 1 amhX_like subfamily Back     alignment and domain information
>gnl|CDD|193541 cd05665, M20_Acy1_IAAspH_bact, M20 Peptidases Aminoacyclase-1 indole-3-acetic-L-aspartic acid hydrolase from bacteria and archaea Back     alignment and domain information
>gnl|CDD|216562 pfam01546, Peptidase_M20, Peptidase family M20/M25/M40 Back     alignment and domain information
>gnl|CDD|193544 cd05668, M20_Acy1_like3, M20 Peptidase Aminoacylase 1 subfamily Back     alignment and domain information
>gnl|CDD|193508 cd03887, M20_Acy1L2, M20 Peptidase Aminoacylase 1-like protein 2, amidohydrolase family Back     alignment and domain information
>gnl|CDD|193547 cd05672, M20_ACY1L2_like, M20 Peptidase Aminoacylase 1-like protein 2-like, amidohydrolase subfamily Back     alignment and domain information
>gnl|CDD|193573 cd09849, M20_Acy1L2_like_2, M20 Peptidase Aminoacylase 1-like protein 2, amidohydrolase family Back     alignment and domain information
>gnl|CDD|193548 cd05673, M20_Acy1L2_AbgB, M20 Peptidase Aminoacylase 1-like protein 2 aminobenzoyl-glutamate utilization protein B subfamily Back     alignment and domain information
>gnl|CDD|193570 cd08659, M20_ArgE_DapE_like, Peptidase M20 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase (ArgE/DapE)-like Back     alignment and domain information
>gnl|CDD|193495 cd03873, Zinc_peptidase_like, Zinc peptidases M18, M20, M28, and M42 Back     alignment and domain information
>gnl|CDD|223697 COG0624, ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|193505 cd03884, M20_bAS, M20 Peptidase beta-alanine synthase, an amidohydrolase Back     alignment and domain information
>gnl|CDD|219515 pfam07687, M20_dimer, Peptidase dimerisation domain Back     alignment and domain information
>gnl|CDD|233632 TIGR01910, DapE-ArgE, acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase Back     alignment and domain information
>gnl|CDD|235995 PRK07338, PRK07338, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|236456 PRK09290, PRK09290, allantoate amidohydrolase; Reviewed Back     alignment and domain information
>gnl|CDD|193558 cd05683, M20_peptT_like, M20 Peptidase T like enzymes specifically cleave tripeptides Back     alignment and domain information
>gnl|CDD|193516 cd03896, M20_PAAh_like, M20 Peptidases, Poly(aspartic acid) hydrolase-like proteins Back     alignment and domain information
>gnl|CDD|193506 cd03885, M20_CPDG2, M20 Peptidase Glutamate carboxypeptidase, a periplasmic enzyme Back     alignment and domain information
>gnl|CDD|236323 PRK08651, PRK08651, succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>gnl|CDD|200138 TIGR01879, hydantase, amidase, hydantoinase/carbamoylase family Back     alignment and domain information
>gnl|CDD|193559 cd08011, M20_ArgE_DapE_like6, M20 Peptidases with similarity to acetylornithine deacetylases and succinyl-diaminopimelate desuccinylases Back     alignment and domain information
>gnl|CDD|193514 cd03894, M20_ArgE, M20 Peptidase acetylornithine deacetylase Back     alignment and domain information
>gnl|CDD|237250 PRK12893, PRK12893, allantoate amidohydrolase; Reviewed Back     alignment and domain information
>gnl|CDD|183817 PRK12892, PRK12892, allantoate amidohydrolase; Reviewed Back     alignment and domain information
>gnl|CDD|130947 TIGR01892, AcOrn-deacetyl, acetylornithine deacetylase (ArgE) Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 440
PLN02693437 IAA-amino acid hydrolase 100.0
PLN02280478 IAA-amino acid hydrolase 100.0
PRK08588377 succinyl-diaminopimelate desuccinylase; Reviewed 100.0
COG1473392 AbgB Metal-dependent amidase/aminoacylase/carboxyp 100.0
PRK06915422 acetylornithine deacetylase; Validated 100.0
TIGR01891363 amidohydrolases amidohydrolase. This model represe 100.0
PRK13013427 succinyl-diaminopimelate desuccinylase; Reviewed 100.0
PRK06133410 glutamate carboxypeptidase; Reviewed 100.0
PRK07338402 hypothetical protein; Provisional 100.0
PRK06837427 acetylornithine deacetylase; Provisional 100.0
PRK13009375 succinyl-diaminopimelate desuccinylase; Reviewed 100.0
PRK08596421 acetylornithine deacetylase; Validated 100.0
PRK13983400 diaminopimelate aminotransferase; Provisional 100.0
TIGR01246370 dapE_proteo succinyl-diaminopimelate desuccinylase 100.0
TIGR01880400 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase 100.0
TIGR03320395 ygeY M20/DapE family protein YgeY. Members of this 100.0
PRK13004399 peptidase; Reviewed 100.0
TIGR03526395 selenium_YgeY putative selenium metabolism hydrola 100.0
TIGR01910375 DapE-ArgE acetylornithine deacetylase or succinyl- 100.0
PRK05111383 acetylornithine deacetylase; Provisional 100.0
PRK09133472 hypothetical protein; Provisional 100.0
PRK07522385 acetylornithine deacetylase; Provisional 100.0
PRK08651394 succinyl-diaminopimelate desuccinylase; Reviewed 100.0
PRK06446436 hypothetical protein; Provisional 100.0
PRK08262486 hypothetical protein; Provisional 100.0
TIGR01892364 AcOrn-deacetyl acetylornithine deacetylase (ArgE). 100.0
PRK08201456 hypothetical protein; Provisional 100.0
PRK07473376 carboxypeptidase; Provisional 100.0
PRK08652347 acetylornithine deacetylase; Provisional 100.0
PRK00466346 acetyl-lysine deacetylase; Validated 100.0
PRK04443348 acetyl-lysine deacetylase; Provisional 100.0
PRK07907449 hypothetical protein; Provisional 100.0
PRK09104464 hypothetical protein; Validated 100.0
PRK13007352 succinyl-diaminopimelate desuccinylase; Reviewed 100.0
TIGR01900373 dapE-gram_pos succinyl-diaminopimelate desuccinyla 100.0
PRK07906426 hypothetical protein; Provisional 100.0
PRK07079469 hypothetical protein; Provisional 100.0
TIGR01883361 PepT-like peptidase T-like protein. This model rep 100.0
PRK08737364 acetylornithine deacetylase; Provisional 100.0
TIGR01886466 dipeptidase dipeptidase PepV. This model represent 100.0
PRK13381404 peptidase T; Provisional 100.0
COG0624409 ArgE Acetylornithine deacetylase/Succinyl-diaminop 100.0
PRK12892412 allantoate amidohydrolase; Reviewed 100.0
PRK05469408 peptidase T; Provisional 100.0
PRK09290413 allantoate amidohydrolase; Reviewed 100.0
PRK07318466 dipeptidase PepV; Reviewed 100.0
PRK12893412 allantoate amidohydrolase; Reviewed 100.0
TIGR01882410 peptidase-T peptidase T. This model represents a t 100.0
PRK06156520 hypothetical protein; Provisional 100.0
PRK12891414 allantoate amidohydrolase; Reviewed 100.0
TIGR01902336 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine d 100.0
PRK07205444 hypothetical protein; Provisional 100.0
PRK12890414 allantoate amidohydrolase; Reviewed 100.0
KOG2275420 consensus Aminoacylase ACY1 and related metalloexo 100.0
TIGR01893477 aa-his-dipept aminoacyl-histidine dipeptidase. 100.0
TIGR01879401 hydantase amidase, hydantoinase/carbamoylase famil 100.0
TIGR01887447 dipeptidaselike dipeptidase, putative. This model 100.0
PRK15026485 aminoacyl-histidine dipeptidase; Provisional 100.0
TIGR03176406 AllC allantoate amidohydrolase. This enzyme cataly 100.0
PRK08554438 peptidase; Reviewed 100.0
PRK13799591 unknown domain/N-carbamoyl-L-amino acid hydrolase 100.0
PRK13590591 putative bifunctional OHCU decarboxylase/allantoat 100.0
KOG2276473 consensus Metalloexopeptidases [Amino acid transpo 100.0
COG2195414 PepD Di- and tripeptidases [Amino acid transport a 99.93
PF01546189 Peptidase_M20: Peptidase family M20/M25/M40 This f 99.86
PF07687111 M20_dimer: Peptidase dimerisation domain This fami 99.73
COG4187 553 RocB Arginine degradation protein (predicted deacy 99.71
PRK10199346 alkaline phosphatase isozyme conversion aminopepti 99.67
TIGR03106343 trio_M42_hydro hydrolase, peptidase M42 family. Th 99.66
PRK09961344 exoaminopeptidase; Provisional 99.63
TIGR03107350 glu_aminopep glutamyl aminopeptidase. This model r 99.53
COG1363355 FrvX Cellulase M and related proteins [Carbohydrat 99.52
PRK09864356 putative peptidase; Provisional 99.46
KOG2194 834 consensus Aminopeptidases of the M20 family [Postt 98.36
PF04389179 Peptidase_M28: Peptidase family M28; InterPro: IPR 98.26
PF05343292 Peptidase_M42: M42 glutamyl aminopeptidase; InterP 97.59
KOG3946338 consensus Glutaminyl cyclase [Posttranslational mo 97.55
KOG2526555 consensus Predicted aminopeptidases - M20/M25/M40 97.0
COG2234435 Iap Predicted aminopeptidases [General function pr 96.78
KOG2195702 consensus Transferrin receptor and related protein 96.67
PF05450234 Nicastrin: Nicastrin; InterPro: IPR008710 Nicastri 94.76
PRK00913483 multifunctional aminopeptidase A; Provisional 93.21
PF00883311 Peptidase_M17: Cytosol aminopeptidase family, cata 93.12
cd00433468 Peptidase_M17 Cytosol aminopeptidase family, N-ter 92.33
PTZ00412569 leucyl aminopeptidase; Provisional 92.16
PF05343292 Peptidase_M42: M42 glutamyl aminopeptidase; InterP 91.99
PRK05015424 aminopeptidase B; Provisional 91.92
KOG2597513 consensus Predicted aminopeptidase of the M17 fami 91.27
TIGR01893477 aa-his-dipept aminoacyl-histidine dipeptidase. 86.42
PRK02256462 putative aminopeptidase 1; Provisional 85.88
COG0260485 PepB Leucyl aminopeptidase [Amino acid transport a 85.54
PTZ00371465 aspartyl aminopeptidase; Provisional 81.36
>PLN02693 IAA-amino acid hydrolase Back     alignment and domain information 
Probab=100.00  E-value=5.3e-59  Score=465.34  Aligned_cols=391  Identities=51%  Similarity=0.881  Sum_probs=335.4

Q ss_pred             hHHHHHhcCCcchHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeecCCCceEEEEEcCCCCCEEEEEEecc
Q 013571           41 TRELLDSAREPEFFEWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSGGEPWFGLRAEMD  120 (440)
Q Consensus        41 ~~~~~~~~~~~~~~~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nv~~~~~~~~~~~i~~~~H~D  120 (440)
                      ..++........+.++++++.++|+++|++|++|.++++||.++|+++|++++...+++|++++++++++|+|+|.||+|
T Consensus        33 ~~~~~~~~~~~~~~~~~~~~r~~lh~~PE~s~~E~~ta~~i~~~L~~~G~~~~~~~~~~~via~~g~~~g~~i~l~~h~D  112 (437)
T PLN02693         33 QINLLELAKSPEVFDWMVRIRRKIHENPELGYEEFETSKLIRSELDLIGIKYRYPVAITGIIGYIGTGEPPFVALRADMD  112 (437)
T ss_pred             HHHHHHHhhhhhhHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHCCCeeEecCCCcEEEEEECCCCCCEEEEEeecC
Confidence            45555444432223789999999999999999999999999999999999987655689999999645568999999999


Q ss_pred             cCCCCCCCCCcccccCCCcccccchhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcccchHHHHHcCCCCCCCEEE
Q 013571          121 ALPLQEMVEWEHKSKNNGKMHGCGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGYGGAYYMIKEGAVDKFQGMF  200 (440)
Q Consensus       121 ~vp~~~~~~~~~~~~~~g~i~GrG~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~G~~~l~~~~~~~~~d~~~  200 (440)
                      |||+++..+|++....+|++||||||+++|++++|+++|++.+..++++|.|+|++|||++.|++.++++|.+++.++++
T Consensus       113 aVp~~e~~~~~~~p~~~G~~hacGhkg~~A~~l~Aa~~L~~~~~~~~g~V~~if~pdEE~~~Ga~~~i~~g~~~~~~~ii  192 (437)
T PLN02693        113 ALPIQEAVEWEHKSKIPGKMHACGHDGHVAMLLGAAKILQEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIF  192 (437)
T ss_pred             CCcCCCCCCCCCCCCCCCCEECCcchHHHHHHHHHHHHHHhCcccCCceEEEEEEEcccchhhHHHHHHCCCCCCCCEEE
Confidence            99998877899998888999999999999999999999998876678999999999999767999999999887778889


Q ss_pred             EeccCCCCCCCcccccCCCcccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeEEEEEEEe
Q 013571          201 GIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFID  280 (440)
Q Consensus       201 ~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~~~~i~  280 (440)
                      +.|..+..+.|.+..+.|..++|..+++|+++|+++|+|+|+.|+|||..+++++.+|+++..+..++....+++++.|+
T Consensus       193 g~h~~p~~~~g~~~~~~g~~~~G~~~~~i~v~Gk~aHaa~P~~G~nAI~~aa~~i~~l~~~~~~~~~~~~~~ti~vg~i~  272 (437)
T PLN02693        193 GIHLSPRTPFGKAASRAGSFMAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKVVTVSKVN  272 (437)
T ss_pred             EEecCCCCCCeeEEeccCcccccceEEEEEEEcccccCCCCCCCcCHHHHHHHHHHHHHHHhcccCCCCCCcEEEEEEEE
Confidence            88887777788777787888899999999999999999999999999999999999999986555555567899999999


Q ss_pred             cCCcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCcCCCHHHHHHHHHHHHhh
Q 013571          281 AGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASM  360 (440)
Q Consensus       281 gG~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  360 (440)
                      ||.+.|+||++|++++++|+.|++  +.+.++|+++++..+..+++++++++......+++++.+++++++.++++++++
T Consensus       273 GG~~~NvVPd~a~~~~diR~~~~~--~~i~~~i~~i~~~~a~~~g~~~e~~~~~~~~~~~~~~~nd~~l~~~~~~~~~~~  350 (437)
T PLN02693        273 GGNAFNVIPDSITIGGTLRAFTGF--TQLQQRIKEIITKQAAVHRCNASVNLTPNGREPMPPTVNNMDLYKQFKKVVRDL  350 (437)
T ss_pred             cCCCCceECCeEEEEEEEecCCHH--HHHHHHHHHHHHHHHHHhCCcEEEEEeecCccCCCCccCCHHHHHHHHHHHHHh
Confidence            999999999999999999999974  589999999999988888888877763111235677778899999999999998


Q ss_pred             cCCCCcccCCCCcccccHHHHHHHhccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhcc
Q 013571          361 VGEPNVHLTPVEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLDN  434 (440)
Q Consensus       361 ~g~~~~~~~~~~~g~tD~~~~~~~~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~~~  434 (440)
                      +|.+.+.......|++|+++|.+.+|.+++++|+.+... .....|+++|+++.+.+..++++|+.++.+++..
T Consensus       351 ~G~~~~~~~~~~~gseDf~~~~~~vP~~~~~lG~~~~~~-~~~~~H~~~f~~de~~l~~~~~~~~~~~~~~l~~  423 (437)
T PLN02693        351 LGQEAFVEAAPEMGSEDFSYFAETIPGHFSLLGMQDETN-GYASSHSPLYRINEDVLPYGAAIHATMAVQYLKE  423 (437)
T ss_pred             cCCcceeecCCCceechHHHHHHHhhhhEEEEecCCCCC-CCCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhh
Confidence            887654322356799999999999999999999874321 1246899999999999999999999999999876

>PLN02280 IAA-amino acid hydrolase Back     alignment and domain information
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>COG1473 AbgB Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only] Back     alignment and domain information
>PRK06915 acetylornithine deacetylase; Validated Back     alignment and domain information
>TIGR01891 amidohydrolases amidohydrolase Back     alignment and domain information
>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK06133 glutamate carboxypeptidase; Reviewed Back     alignment and domain information
>PRK07338 hypothetical protein; Provisional Back     alignment and domain information
>PRK06837 acetylornithine deacetylase; Provisional Back     alignment and domain information
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK08596 acetylornithine deacetylase; Validated Back     alignment and domain information
>PRK13983 diaminopimelate aminotransferase; Provisional Back     alignment and domain information
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade Back     alignment and domain information
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase Back     alignment and domain information
>TIGR03320 ygeY M20/DapE family protein YgeY Back     alignment and domain information
>PRK13004 peptidase; Reviewed Back     alignment and domain information
>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase Back     alignment and domain information
>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase Back     alignment and domain information
>PRK05111 acetylornithine deacetylase; Provisional Back     alignment and domain information
>PRK09133 hypothetical protein; Provisional Back     alignment and domain information
>PRK07522 acetylornithine deacetylase; Provisional Back     alignment and domain information
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK06446 hypothetical protein; Provisional Back     alignment and domain information
>PRK08262 hypothetical protein; Provisional Back     alignment and domain information
>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE) Back     alignment and domain information
>PRK08201 hypothetical protein; Provisional Back     alignment and domain information
>PRK07473 carboxypeptidase; Provisional Back     alignment and domain information
>PRK08652 acetylornithine deacetylase; Provisional Back     alignment and domain information
>PRK00466 acetyl-lysine deacetylase; Validated Back     alignment and domain information
>PRK04443 acetyl-lysine deacetylase; Provisional Back     alignment and domain information
>PRK07907 hypothetical protein; Provisional Back     alignment and domain information
>PRK09104 hypothetical protein; Validated Back     alignment and domain information
>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>TIGR01900 dapE-gram_pos succinyl-diaminopimelate desuccinylase Back     alignment and domain information
>PRK07906 hypothetical protein; Provisional Back     alignment and domain information
>PRK07079 hypothetical protein; Provisional Back     alignment and domain information
>TIGR01883 PepT-like peptidase T-like protein Back     alignment and domain information
>PRK08737 acetylornithine deacetylase; Provisional Back     alignment and domain information
>TIGR01886 dipeptidase dipeptidase PepV Back     alignment and domain information
>PRK13381 peptidase T; Provisional Back     alignment and domain information
>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism] Back     alignment and domain information
>PRK12892 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK05469 peptidase T; Provisional Back     alignment and domain information
>PRK09290 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK07318 dipeptidase PepV; Reviewed Back     alignment and domain information
>PRK12893 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>TIGR01882 peptidase-T peptidase T Back     alignment and domain information
>PRK06156 hypothetical protein; Provisional Back     alignment and domain information
>PRK12891 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase Back     alignment and domain information
>PRK07205 hypothetical protein; Provisional Back     alignment and domain information
>PRK12890 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>KOG2275 consensus Aminoacylase ACY1 and related metalloexopeptidases [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase Back     alignment and domain information
>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family Back     alignment and domain information
>TIGR01887 dipeptidaselike dipeptidase, putative Back     alignment and domain information
>PRK15026 aminoacyl-histidine dipeptidase; Provisional Back     alignment and domain information
>TIGR03176 AllC allantoate amidohydrolase Back     alignment and domain information
>PRK08554 peptidase; Reviewed Back     alignment and domain information
>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional Back     alignment and domain information
>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional Back     alignment and domain information
>KOG2276 consensus Metalloexopeptidases [Amino acid transport and metabolism] Back     alignment and domain information
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism] Back     alignment and domain information
>PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF07687 M20_dimer: Peptidase dimerisation domain This family only corresponds to M20 family; InterPro: IPR011650 This domain consists of 4 beta strands and two alpha helices which make up the dimerisation surface of members of the MEROPS peptidase family M20 [] Back     alignment and domain information
>COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism] Back     alignment and domain information
>PRK10199 alkaline phosphatase isozyme conversion aminopeptidase; Provisional Back     alignment and domain information
>TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family Back     alignment and domain information
>PRK09961 exoaminopeptidase; Provisional Back     alignment and domain information
>TIGR03107 glu_aminopep glutamyl aminopeptidase Back     alignment and domain information
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09864 putative peptidase; Provisional Back     alignment and domain information
>KOG2194 consensus Aminopeptidases of the M20 family [Posttranslational modification, protein turnover, chaperones; General function prediction only] Back     alignment and domain information
>PF04389 Peptidase_M28: Peptidase family M28; InterPro: IPR007484 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>KOG3946 consensus Glutaminyl cyclase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG2526 consensus Predicted aminopeptidases - M20/M25/M40 family [Amino acid transport and metabolism] Back     alignment and domain information
>COG2234 Iap Predicted aminopeptidases [General function prediction only] Back     alignment and domain information
>KOG2195 consensus Transferrin receptor and related proteins containing the protease-associated (PA) domain [Posttranslational modification, protein turnover, chaperones; Inorganic ion transport and metabolism; General function prediction only] Back     alignment and domain information
>PF05450 Nicastrin: Nicastrin; InterPro: IPR008710 Nicastrin and presenilin are two major components of the gamma-secretase complex, which executes the intramembrane proteolysis of type I integral membrane proteins such as the amyloid precursor protein (APP) and Notch Back     alignment and domain information
>PRK00913 multifunctional aminopeptidase A; Provisional Back     alignment and domain information
>PF00883 Peptidase_M17: Cytosol aminopeptidase family, catalytic domain; InterPro: IPR000819 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>cd00433 Peptidase_M17 Cytosol aminopeptidase family, N-terminal and catalytic domains Back     alignment and domain information
>PTZ00412 leucyl aminopeptidase; Provisional Back     alignment and domain information
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PRK05015 aminopeptidase B; Provisional Back     alignment and domain information
>KOG2597 consensus Predicted aminopeptidase of the M17 family [General function prediction only] Back     alignment and domain information
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase Back     alignment and domain information
>PRK02256 putative aminopeptidase 1; Provisional Back     alignment and domain information
>COG0260 PepB Leucyl aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>PTZ00371 aspartyl aminopeptidase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query440
1xmb_A418 X-ray Structure Of Iaa-aminoacid Hydrolase From Ara 1e-116
1ysj_A404 Crystal Structure Of Bacillus Subtilis Yxep Protein 4e-61
4ewt_A392 The Crystal Structure Of A Putative Aminohydrolase 2e-50
3io1_A445 Crystal Structure Of Aminobenzoyl-Glutamate Utiliza 4e-17
3ram_A394 Crystal Structure Of Hmra Length = 394 2e-12
>pdb|1XMB|A Chain A, X-ray Structure Of Iaa-aminoacid Hydrolase From Arabidopsis Thaliana Gene At5g56660 Length = 418 Back     alignment and structure 
Iteration: 1

 Score =  414 bits (1065), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 204/400 (51%), Positives = 281/400 (70%), Gaps = 5/400 (1%)
Query: 34  SEQLSSLTRELLDSAREPEFFEWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYT 93
           +E  S +  +LL+ A+ PE F+WM +IRR+IHENPELG+EE ETS+L+RSEL+ +GI+Y 
Sbjct: 7   AEDTSQIQTKLLEFAKSPEVFDWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYR 66
Query: 94  WPVAKTGIVASVGSGGEPWFGLRAEMDALPLQEMVEWEHKSKNNGKMHGCGHDVHTTILL 153
           +PVA TG++  +G+G  P+  LRA+MDALP+QE VEWEHKSK  GKMH CGHD H T+LL
Sbjct: 67  YPVAITGVIGYIGTGEPPFVALRADMDALPIQEGVEWEHKSKIAGKMHACGHDGHVTMLL 126
Query: 154 GAARLLKHRMDRLKGTVKLVFQPGEEGYGGAYYMIKEGAVDKFQGMFGIHISPVLPTGTV 213
           GAA++L      L+GTV L+FQP EEG  GA  M +EGA+   + +FGIH+S  +P G  
Sbjct: 127 GAAKILHEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLSARIPFGKA 186
Query: 214 GSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETDPLEARV 273
            SR G  LAG+G F AVI GKGGHAA+PQ T DPV+AAS  +L+LQ +VSRETDPL+++V
Sbjct: 187 ASRAGSFLAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKV 246
Query: 274 VTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFL 333
           VTV  ++ G A N+IP+ +  GGT R+ T  G   L+QR+KEVI  QAAVH+C+A+++  
Sbjct: 247 VTVSKVNGGNAFNVIPDSITIGGTLRAFT--GFTQLQQRVKEVITKQAAVHRCNASVNLT 304
Query: 334 EEKMRHYPATVNDEKMYEHGKRVGASMVG-EPNVHLTPVEMGAEDFSFYTQRMPAAHFYV 392
                  P TVN++ +Y+  K+V   ++G E  V   PV MG+EDFS++ + +P     +
Sbjct: 305 PNGREPMPPTVNNKDLYKQFKKVVRDLLGQEAFVEAAPV-MGSEDFSYFAETIPGHFSLL 363
Query: 393 GTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYL 432
           G ++ET   +   HSP   ++ED LP GAA+HA++A+ YL
Sbjct: 364 GMQDET-NGYASSHSPLYRINEDVLPYGAAIHASMAVQYL 402
>pdb|1YSJ|A Chain A, Crystal Structure Of Bacillus Subtilis Yxep Protein (Apc1829), A Dinuclear Metal Binding Peptidase From M20 Family Length = 404 Back     alignment and structure
>pdb|4EWT|A Chain A, The Crystal Structure Of A Putative Aminohydrolase From Methicillin Resistant Staphylococcus Aureus Length = 392 Back     alignment and structure
>pdb|3IO1|A Chain A, Crystal Structure Of Aminobenzoyl-Glutamate Utilization Protein From Klebsiella Pneumoniae Length = 445 Back     alignment and structure
>pdb|3RAM|A Chain A, Crystal Structure Of Hmra Length = 394 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query440
1xmb_A418 IAA-amino acid hydrolase homolog 2; structural gen 0.0
1ysj_A404 Protein YXEP; M20 family peptidase, dinuclear meta 0.0
3io1_A445 Aminobenzoyl-glutamate utilization protein; peptid 1e-145
3ram_A394 HMRA protein; two-domain, catalytic (alpha-beta-al 5e-45
1cg2_A393 Carboxypeptidase G2; metallocarboxypeptidase, hydr 1e-20
3tx8_A369 Succinyl-diaminopimelate desuccinylase; peptidase, 3e-16
3ct9_A356 Acetylornithine deacetylase; NP_812461.1, A putati 6e-15
1z2l_A423 Allantoate amidohydrolase; ALLC, purine cataboli a 3e-12
3pfo_A433 Putative acetylornithine deacetylase; metal bindin 6e-12
3rza_A396 Tripeptidase; phosphorylase/hydrolase-like, struct 7e-12
2rb7_A364 Peptidase, M20/M25/M40 family; YP_387682.1, CO-cat 1e-11
3n5f_A408 L-carbamoylase, N-carbamoyl-L-amino acid hydrolase 2e-11
3gb0_A373 Peptidase T; NP_980509.1, aminopeptidase PEPT, pep 6e-10
2v8h_A474 Beta-alanine synthase; amidohydrolase, alpha and b 6e-10
2f7v_A369 Aectylcitrulline deacetylase; alpha/beta, hydrolas 1e-08
1fno_A417 Peptidase T; metallo peptidase, protease, hydrolas 1e-06
3ife_A434 Peptidase T; metallopeptidase, aminopeptidase, hyd 1e-04
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A Length = 418 Back     alignment and structure
 Score =  586 bits (1513), Expect = 0.0
 Identities = 200/405 (49%), Positives = 278/405 (68%), Gaps = 3/405 (0%)

Query: 29  ETQSGSEQLSSLTRELLDSAREPEFFEWMRRIRRRIHENPELGFEEYETSQLVRSELDSL 88
           E+   +E  S +  +LL+ A+ PE F+WM +IRR+IHENPELG+EE ETS+L+RSEL+ +
Sbjct: 2   ESPWIAEDTSQIQTKLLEFAKSPEVFDWMVKIRRKIHENPELGYEELETSKLIRSELELI 61

Query: 89  GIEYTWPVAKTGIVASVGSGGEPWFGLRAEMDALPLQEMVEWEHKSKNNGKMHGCGHDVH 148
           GI+Y +PVA TG++  +G+G  P+  LRA+MDALP+QE VEWEHKSK  GKMH CGHD H
Sbjct: 62  GIKYRYPVAITGVIGYIGTGEPPFVALRADMDALPIQEGVEWEHKSKIAGKMHACGHDGH 121

Query: 149 TTILLGAARLLKHRMDRLKGTVKLVFQPGEEGYGGAYYMIKEGAVDKFQGMFGIHISPVL 208
            T+LLGAA++L      L+GTV L+FQP EEG  GA  M +EGA+   + +FGIH+S  +
Sbjct: 122 VTMLLGAAKILHEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLSARI 181

Query: 209 PTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETDP 268
           P G   SR G  LAG+G F AVI GKGGHAA+PQ T DPV+AAS  +L+LQ +VSRETDP
Sbjct: 182 PFGKAASRAGSFLAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDP 241

Query: 269 LEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSA 328
           L+++VVTV  ++ G A N+IP+ +  GGT R+ T      L+QR+KEVI  QAAVH+C+A
Sbjct: 242 LDSKVVTVSKVNGGNAFNVIPDSITIGGTLRAFTGF--TQLQQRVKEVITKQAAVHRCNA 299

Query: 329 TIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQRMPAA 388
           +++         P TVN++ +Y+  K+V   ++G+         MG+EDFS++ + +P  
Sbjct: 300 SVNLTPNGREPMPPTVNNKDLYKQFKKVVRDLLGQEAFVEAAPVMGSEDFSYFAETIPGH 359

Query: 389 HFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLD 433
              +G ++ET       HSP   ++ED LP GAA+HA++A+ YL 
Sbjct: 360 FSLLGMQDETNGYAS-SHSPLYRINEDVLPYGAAIHASMAVQYLK 403
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1 Length = 404 Back     alignment and structure
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp} Length = 445 Back     alignment and structure
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus} Length = 394 Back     alignment and structure
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1 Length = 393 Back     alignment and structure
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum} Length = 369 Back     alignment and structure
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482} Length = 356 Back     alignment and structure
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A Length = 423 Back     alignment and structure
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris} Length = 433 Back     alignment and structure
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp} Length = 396 Back     alignment and structure
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp} Length = 364 Back     alignment and structure
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus} Length = 408 Back     alignment and structure
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987} Length = 373 Back     alignment and structure
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A Length = 474 Back     alignment and structure
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A Length = 369 Back     alignment and structure
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A Length = 417 Back     alignment and structure
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis} Length = 434 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query440
1xmb_A418 IAA-amino acid hydrolase homolog 2; structural gen 100.0
1ysj_A404 Protein YXEP; M20 family peptidase, dinuclear meta 100.0
3io1_A445 Aminobenzoyl-glutamate utilization protein; peptid 100.0
3pfo_A433 Putative acetylornithine deacetylase; metal bindin 100.0
3ram_A394 HMRA protein; two-domain, catalytic (alpha-beta-al 100.0
1vgy_A393 Succinyl-diaminopimelate desuccinylase; structural 100.0
1cg2_A393 Carboxypeptidase G2; metallocarboxypeptidase, hydr 100.0
3isz_A377 Succinyl-diaminopimelate desuccinylase; DAPE, Zn-b 100.0
3rza_A396 Tripeptidase; phosphorylase/hydrolase-like, struct 100.0
3dlj_A485 Beta-Ala-His dipeptidase; CNDP1, carnosine dipepti 100.0
3tx8_A369 Succinyl-diaminopimelate desuccinylase; peptidase, 100.0
3gb0_A373 Peptidase T; NP_980509.1, aminopeptidase PEPT, pep 100.0
2f7v_A369 Aectylcitrulline deacetylase; alpha/beta, hydrolas 100.0
2zog_A479 Cytosolic non-specific dipeptidase; metallopeptida 100.0
2pok_A481 Peptidase, M20/M25/M40 family; M20 family peptidas 100.0
3ct9_A356 Acetylornithine deacetylase; NP_812461.1, A putati 100.0
3pfe_A472 Succinyl-diaminopimelate desuccinylase; metal bind 100.0
2rb7_A364 Peptidase, M20/M25/M40 family; YP_387682.1, CO-cat 100.0
3ife_A434 Peptidase T; metallopeptidase, aminopeptidase, hyd 100.0
3khx_A492 Putative dipeptidase sacol1801; DAPE, metallopepti 100.0
1z2l_A423 Allantoate amidohydrolase; ALLC, purine cataboli a 100.0
3n5f_A408 L-carbamoylase, N-carbamoyl-L-amino acid hydrolase 100.0
1fno_A417 Peptidase T; metallo peptidase, protease, hydrolas 100.0
2v8h_A474 Beta-alanine synthase; amidohydrolase, alpha and b 100.0
2qyv_A487 XAA-His dipeptidase; YP_718209.1, structural genom 100.0
3mru_A490 Aminoacyl-histidine dipeptidase; metalloprotease, 100.0
1lfw_A470 PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bac 100.0
3t68_A268 Succinyl-diaminopimelate desuccinylase; DAPE, csgi 100.0
4h2k_A269 Succinyl-diaminopimelate desuccinylase; DAPE, MCSG 99.98
1q7l_A198 Aminoacylase-1; catalysis, enzyme dimerization, si 99.93
2fvg_A340 Endoglucanase; TM1049, structural genomics, joint 99.93
1vhe_A373 Aminopeptidase/glucanase homolog; structural genom 99.9
2wyr_A332 Cobalt-activated peptidase TET1; hydrolase, large 99.89
2wzn_A354 TET3, 354AA long hypothetical operon protein FRV; 99.88
2gre_A349 Deblocking aminopeptidase; structural genomi prote 99.87
1y0y_A353 FRV operon protein FRVX; aminopeptidase, PDZ, hydr 99.87
1vho_A346 Endoglucanase; structural genomics, unknown functi 99.86
3cpx_A321 Aminopeptidase, M42 family; YP_676701.1, putative 99.84
1ylo_A348 Hypothetical protein SF2450; structural genomics, 99.83
1tkj_A284 Aminopeptidase, SGAP; double-zinc metalloproteinas 99.77
1rtq_A299 Bacterial leucyl aminopeptidase; bimetallic, zinc, 99.66
3kl9_A355 PEPA, glutamyl aminopeptidase; tetrahedral aminope 99.66
3tc8_A309 Leucine aminopeptidase; phosphorylase/hydrolase-li 99.63
3gux_A314 Putative Zn-dependent exopeptidase; aminopeptidase 99.59
2vpu_A354 TET3, 354AA long hypothetical operon protein FRV; 99.57
2afw_A329 Glutaminyl-peptide cyclotransferase; alpha-beta pr 99.52
3isx_A343 Endoglucanase; TM1050, structural genomics, joint 99.43
4fuu_A309 Leucine aminopeptidase; phosphorylase/hydrolase li 99.35
4fai_A330 CG5976, isoform B; alpha/beta hydrolase, PGlu form 99.34
3pb6_X330 Glutaminyl-peptide cyclotransferase-like protein; 99.32
4f9u_A312 CG32412; alpha/beta hydrolase, PGlu formation, PE, 99.3
1q7l_B88 Aminoacylase-1; catalysis, enzyme dimerization, si 99.09
3iib_A444 Peptidase M28; YP_926796.1, structural genomics, J 98.69
2ek8_A421 Aminopeptidase; metalloproteinase, hydrolase; 1.80 98.66
3fed_A707 Glutamate carboxypeptidase III; metallopeptidase, 98.24
3kas_A640 Transferrin receptor protein 1; transferrin recept 98.14
3k9t_A435 Putative peptidase; structural genomics, joint cen 93.87
3vat_A496 Dnpep, aspartyl aminopeptidase; alpha-beta-alpha s 91.8
2glf_A450 Probable M18-family aminopeptidase 1; putative, NY 91.59
2ijz_A428 Probable M18-family aminopeptidase 2; putative ami 89.91
1y7e_A458 Probable M18-family aminopeptidase 1; aminopeptida 88.79
4eme_A571 M18 aspartyl aminopeptidase; dnpep/M18/aminopeptid 86.74
2glf_A450 Probable M18-family aminopeptidase 1; putative, NY 86.19
2ijz_A428 Probable M18-family aminopeptidase 2; putative ami 85.76
2hc9_A491 Leucine aminopeptidase 1; carbonate, structural ge 85.08
1y7e_A458 Probable M18-family aminopeptidase 1; aminopeptida 84.58
1lam_A484 Leucine aminopeptidase; exopeptidase, metallopepti 84.0
3kzw_A515 Cytosol aminopeptidase; hydrolase, manganese bindi 83.98
3ij3_A482 Cytosol aminopeptidase; PEPB, peptidase M17 family 83.45
2glj_A461 Probable M18-family aminopeptidase 1; aminopeptida 81.66
1gyt_A503 Cytosol aminopeptidase; hydrolase, DNA recombinati 81.61
4efd_A522 Aminopeptidase; structural genomics, structural ge 81.28
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A Back     alignment and structure
Probab=100.00  E-value=4.2e-60  Score=473.87  Aligned_cols=390  Identities=50%  Similarity=0.862  Sum_probs=316.2

Q ss_pred             hHHHHHhcCCcchH--HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeecCCCceEEEEEcCCCCCEEEEEEe
Q 013571           41 TRELLDSAREPEFF--EWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSGGEPWFGLRAE  118 (440)
Q Consensus        41 ~~~~~~~~~~~~~~--~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nv~~~~~~~~~~~i~~~~H  118 (440)
                      .+++.++++.  ..  +++++++++|+++||+|++|.++++||.++|+++|++++.+..++|+++++++++.|+|+|.||
T Consensus        14 ~~~i~~~~~~--~~~~~~~i~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~l~a~~~~~~~~~i~l~aH   91 (418)
T 1xmb_A           14 QTKLLEFAKS--PEVFDWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPVAITGVIGYIGTGEPPFVALRAD   91 (418)
T ss_dssp             --CHHHHHHS--HHHHHHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHHTCCEEEEETTTEEEEEEESSSSCEEEEEEE
T ss_pred             HHHHHHHHHh--hhcHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHcCCeeEeccCCcEEEEEEcCCCCCEEEEEec
Confidence            3345555555  34  7899999999999999999999999999999999999887655789999997642289999999


Q ss_pred             cccCCCCCCCCCcccccCCCcccccchhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcccchHHHHHcCCCCCCCE
Q 013571          119 MDALPLQEMVEWEHKSKNNGKMHGCGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGYGGAYYMIKEGAVDKFQG  198 (440)
Q Consensus       119 ~D~vp~~~~~~~~~~~~~~g~i~GrG~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~G~~~l~~~~~~~~~d~  198 (440)
                      |||||.++|..|||...++|++||||+|++++++|+|+++|++.+.+++++|.|+|++|||++.|++.+++++.++++|+
T Consensus        92 ~D~vp~~~~~~~pf~~~~~g~~~g~G~d~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EEg~~G~~~~~~~g~~~~~d~  171 (418)
T 1xmb_A           92 MDALPIQEGVEWEHKSKIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEA  171 (418)
T ss_dssp             CCCBSCCCCCCSTTCCSSTTCBCCSSHHHHHHHHHHHHHHHHHTGGGCSSEEEEEEECCTTTTCHHHHHHHTTTTTTEEE
T ss_pred             ccccCCCCCCCCCcccCCCCceEeCCchHHHHHHHHHHHHHHhccccCCceEEEEEeccccccccHHHHHHcCCcCCCCE
Confidence            99999999999999988899999999999999999999999998878999999999999996679999999887767899


Q ss_pred             EEEeccCCCCCCCcccccCCCcccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeEEEEEE
Q 013571          199 MFGIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGF  278 (440)
Q Consensus       199 ~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~~~~  278 (440)
                      ++++|.+++.+.|.+....+..++|..+++|+++|+++|+|+|+.|.|||..+++++.+|+++..+..++...++++++.
T Consensus       172 ~i~~~~~~~~~~g~~~~~~~~~~~g~~~~~i~v~G~~~Has~P~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~t~~vg~  251 (418)
T 1xmb_A          172 IFGIHLSARIPFGKAASRAGSFLAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKVVTVSK  251 (418)
T ss_dssp             EEEEEEEEEEETTCEEECSEEEECEEEEEEEEEEEC---------CCHHHHHHHHHHHHHHTTCBCCSSGGGCEEEEEEE
T ss_pred             EEEEecCCCCCCceeEeeeccccccceeEEEEEEecCcccCCCccCCCHHHHHHHHHHHHHHHHhcccCCCCCcEEEEEE
Confidence            99988766667776655666677899999999999999999999999999999999999988754444444567999999


Q ss_pred             EecCCcccccccceEEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCcCCCHHHHHHHHHHHH
Q 013571          279 IDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGA  358 (440)
Q Consensus       279 i~gG~~~n~iP~~a~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  358 (440)
                      |+||.+.|+||++|++++|+|+.|  +.+++.++++++++..+..+++++++++......++|++..++++++.++++++
T Consensus       252 i~gG~~~NvIP~~a~~~~diR~~~--~~~~i~~~i~~~~~~~a~~~g~~~~~~~~~~~~~p~~~~~~d~~l~~~~~~~~~  329 (418)
T 1xmb_A          252 VNGGNAFNVIPDSITIGGTLRAFT--GFTQLQQRVKEVITKQAAVHRCNASVNLTPNGREPMPPTVNNKDLYKQFKKVVR  329 (418)
T ss_dssp             EC--------CCEEEEEEEEEESS--CHHHHHHHHHHHHHHHHHHTTEEEEEESSGGGCCCBCCEEECHHHHHHHHHHHH
T ss_pred             EEecCcCCcCCCeEEEEEEEccCc--HHHHHHHHHHHHHHHHHHHhCCeEEEEEccCCcccCCCccCCHHHHHHHHHHHH
Confidence            999999999999999999999999  899999999999999888888888887621001126777789999999999999


Q ss_pred             hhcCCCCcccCCCCcccccHHHHHHHhccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhccc
Q 013571          359 SMVGEPNVHLTPVEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLDNL  435 (440)
Q Consensus       359 ~~~g~~~~~~~~~~~g~tD~~~~~~~~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~~~~  435 (440)
                      +++|.+++..+....|++|+++|.+.+|++++++|++... +....+|++||+++++++.+++++|+.++.+++.+.
T Consensus       330 ~~~g~~~~~~~~~~~g~tD~~~~~~~~P~~~~~~G~~~~~-~~~~~~H~~~E~i~~~~l~~~~~~~~~~~~~l~~~~  405 (418)
T 1xmb_A          330 DLLGQEAFVEAAPVMGSEDFSYFAETIPGHFSLLGMQDET-NGYASSHSPLYRINEDVLPYGAAIHASMAVQYLKEK  405 (418)
T ss_dssp             HHHCGGGEEECCCBCCCCTHHHHHTTSCEEEEEEEEECTT-CCSCCTTCTTCCCCGGGHHHHHHHHHHHHHHHHHHH
T ss_pred             HhcCCcceeccCCCCCcchHHHHHHHCCEEEEEEeCCCCC-CCCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHhcC
Confidence            9778754322357889999999988899987778886532 224569999999999999999999999999998753
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp} Back     alignment and structure
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris} Back     alignment and structure
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus} Back     alignment and structure
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A Back     alignment and structure
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp} Back     alignment and structure
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens} Back     alignment and structure
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum} Back     alignment and structure
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987} Back     alignment and structure
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A Back     alignment and structure
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A* Back     alignment and structure
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae} Back     alignment and structure
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp} Back     alignment and structure
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp} Back     alignment and structure
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis} Back     alignment and structure
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A Back     alignment and structure
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A Back     alignment and structure
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus} Back     alignment and structure
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A Back     alignment and structure
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A Back     alignment and structure
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT} Back     alignment and structure
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus} Back     alignment and structure
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A Back     alignment and structure
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae} Back     alignment and structure
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4 Back     alignment and structure
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A Back     alignment and structure
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A Back     alignment and structure
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A Back     alignment and structure
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406} Back     alignment and structure
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A Back     alignment and structure
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ... Back     alignment and structure
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae} Back     alignment and structure
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis} Back     alignment and structure
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482} Back     alignment and structure
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ... Back     alignment and structure
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima} Back     alignment and structure
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron} Back     alignment and structure
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A* Back     alignment and structure
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X* Back     alignment and structure
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A* Back     alignment and structure
>1q7l_B Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4 Back     alignment and structure
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B} Back     alignment and structure
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A* Back     alignment and structure
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ... Back     alignment and structure
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A Back     alignment and structure
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum} Back     alignment and structure
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A* Back     alignment and structure
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima} Back     alignment and structure
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa} Back     alignment and structure
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>4eme_A M18 aspartyl aminopeptidase; dnpep/M18/aminopeptidase, protease, hydrolase; 2.60A {Plasmodium falciparum 3D7} Back     alignment and structure
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima} Back     alignment and structure
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa} Back     alignment and structure
>2hc9_A Leucine aminopeptidase 1; carbonate, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics; 1.85A {Caenorhabditis elegans} PDB: 2hb6_A Back     alignment and structure
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>1lam_A Leucine aminopeptidase; exopeptidase, metallopeptidase, hydrolase (A aminoacylpeptide); 1.60A {Bos taurus} SCOP: c.56.5.3 c.50.1.1 PDB: 1lan_A 1lcp_A* 1lap_A 1bpn_A 1bpm_A 1bll_E* 2j9a_A* 2ewb_A* Back     alignment and structure
>3kzw_A Cytosol aminopeptidase; hydrolase, manganese binding, protease, structural genomics; 2.70A {Staphylococcus aureus subsp} Back     alignment and structure
>3ij3_A Cytosol aminopeptidase; PEPB, peptidase M17 family, IDP01962 aminopeptidase, hydrolase, manganese, metal-binding, protea structural genomics; HET: PGE PG4; 1.80A {Coxiella burnetii} Back     alignment and structure
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum} Back     alignment and structure
>1gyt_A Cytosol aminopeptidase; hydrolase, DNA recombination; 2.5A {Escherichia coli} SCOP: c.56.5.3 c.50.1.1 Back     alignment and structure
>4efd_A Aminopeptidase; structural genomics, structural genomics consortium, SGC, hydrolase; 2.45A {Trypanosoma brucei brucei} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 440
d1xmba1273 c.56.5.4 (A:37-215,A:335-428) IAA-amino acid hydro 4e-54
d1xmba1273 c.56.5.4 (A:37-215,A:335-428) IAA-amino acid hydro 2e-16
d1ysja1261 c.56.5.4 (A:4-177,A:293-379) Protein YxeP {Bacillu 3e-44
d1ysja1261 c.56.5.4 (A:4-177,A:293-379) Protein YxeP {Bacillu 4e-12
d1xmba2119 d.58.19.1 (A:216-334) IAA-amino acid hydrolase {Mo 4e-25
d1ysja2115 d.58.19.1 (A:178-292) Protein YxeP {Bacillus subti 2e-19
d1z2la2117 d.58.19.1 (A:213-329) Allantoate amidohydrolase Al 9e-17
d1cg2a2113 d.58.19.1 (A:214-326) Carboxypeptidase G2 {Pseudom 8e-16
d1lfwa2196 d.58.19.1 (A:187-382) Aminopeptidase PepV {Lactoba 1e-15
d1vgya2113 d.58.19.1 (A:181-293) Succinyl-diaminopimelate des 2e-15
d1r3na2116 d.58.19.1 (A:248-363) Peptidase-like beta-alanine 6e-12
d2grea2233 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptid 1e-11
d1vgya1262 c.56.5.4 (A:2-180,A:294-376) Succinyl-diaminopimel 1e-07
>d1xmba1 c.56.5.4 (A:37-215,A:335-428) IAA-amino acid hydrolase, catalytic domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 273 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Bacterial dinuclear zinc exopeptidases
domain: IAA-amino acid hydrolase, catalytic domain
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  179 bits (455), Expect = 4e-54
 Identities = 112/250 (44%), Positives = 153/250 (61%), Gaps = 9/250 (3%)

Query: 43  ELLDSAREPEFFEWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIV 102
           +LL+ A+ PE F+WM +IRR+IHENPELG+EE ETS+L+RSEL+ +GI+Y +PVA TG++
Sbjct: 1   KLLEFAKSPEVFDWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPVAITGVI 60

Query: 103 ASVGSGGEPWFGLRAEMDALPLQEMVEWEHKSKNNGKMHGCGHDVHTTILLGAARLLKHR 162
             +G+G  P+  LRA+MDALP+QE VEWEHKSK  GKMH CGHD H T+LLGAA++L   
Sbjct: 61  GYIGTGEPPFVALRADMDALPIQEGVEWEHKSKIAGKMHACGHDGHVTMLLGAAKILHEH 120

Query: 163 MDRLKGTVKLVFQPGEEGYGGAYYMIKEGAVDKFQGMFGIHISPVLPTGTVGSRPGPLLA 222
              L+GTV L+FQP EEG  GA  M +EGA+   + +FGIH+S  +P G   SR G  L 
Sbjct: 121 RHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLSARIPFGKAASRAGSFLT 180

Query: 223 GSGRFTAVIKGKGGHAAMPQD---TRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFI 279
            + +       K     + Q+      PV+ +             ET P    ++ +   
Sbjct: 181 VNNKDLYKQFKKVVRDLLGQEAFVEAAPVMGSE------DFSYFAETIPGHFSLLGMQDE 234

Query: 280 DAGQAGNIIP 289
             G A +  P
Sbjct: 235 TNGYASSHSP 244
>d1xmba1 c.56.5.4 (A:37-215,A:335-428) IAA-amino acid hydrolase, catalytic domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 273 Back     information, alignment and structure
>d1ysja1 c.56.5.4 (A:4-177,A:293-379) Protein YxeP {Bacillus subtilis [TaxId: 1423]} Length = 261 Back     information, alignment and structure
>d1ysja1 c.56.5.4 (A:4-177,A:293-379) Protein YxeP {Bacillus subtilis [TaxId: 1423]} Length = 261 Back     information, alignment and structure
>d1xmba2 d.58.19.1 (A:216-334) IAA-amino acid hydrolase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 119 Back     information, alignment and structure
>d1ysja2 d.58.19.1 (A:178-292) Protein YxeP {Bacillus subtilis [TaxId: 1423]} Length = 115 Back     information, alignment and structure
>d1z2la2 d.58.19.1 (A:213-329) Allantoate amidohydrolase AllC {Escherichia coli [TaxId: 562]} Length = 117 Back     information, alignment and structure
>d1cg2a2 d.58.19.1 (A:214-326) Carboxypeptidase G2 {Pseudomonas sp., strain rs-16 [TaxId: 306]} Length = 113 Back     information, alignment and structure
>d1lfwa2 d.58.19.1 (A:187-382) Aminopeptidase PepV {Lactobacillus delbrueckii [TaxId: 1584]} Length = 196 Back     information, alignment and structure
>d1vgya2 d.58.19.1 (A:181-293) Succinyl-diaminopimelate desuccinylase {Neisseria meningitidis [TaxId: 487]} Length = 113 Back     information, alignment and structure
>d1r3na2 d.58.19.1 (A:248-363) Peptidase-like beta-alanine synthase {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} Length = 116 Back     information, alignment and structure
>d2grea2 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptidase YhfE {Bacillus cereus [TaxId: 1396]} Length = 233 Back     information, alignment and structure
>d1vgya1 c.56.5.4 (A:2-180,A:294-376) Succinyl-diaminopimelate desuccinylase, catalytic domain {Neisseria meningitidis [TaxId: 487]} Length = 262 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query440
d1xmba1273 IAA-amino acid hydrolase, catalytic domain {Mouse- 100.0
d1ysja1261 Protein YxeP {Bacillus subtilis [TaxId: 1423]} 100.0
d1vgya1262 Succinyl-diaminopimelate desuccinylase, catalytic 99.96
g1q7l.1280 Aminoacylase-1, catalytic domain {Human (Homo sapi 99.96
d1cg2a1276 Carboxypeptidase G2, catalytic domain {Pseudomonas 99.93
d1lfwa1272 Aminopeptidase PepV {Lactobacillus delbrueckii [Ta 99.88
d1fnoa4295 Peptidase T (tripeptidase), catalytic domain {Salm 99.88
d1ysja2115 Protein YxeP {Bacillus subtilis [TaxId: 1423]} 99.85
d1vhea2275 Hypothetical protein YsdC, catalytic domain {Bacil 99.84
d1yloa2264 Aminopeptidase YpdE {Shigella flexneri [TaxId: 623 99.83
d1xmba2119 IAA-amino acid hydrolase {Mouse-ear cress (Arabido 99.83
d2grea2233 Deblocking aminopeptidase YhfE {Bacillus cereus [T 99.82
d1vhoa2248 Putative endoglucanase TM1048, catalytic domain {T 99.8
d2fvga2255 Endoglucanase TM1049 {Thermotoga maritima [TaxId: 99.79
d1r3na1322 Peptidase-like beta-alanine synthase, catalytic do 99.78
d1vgya2113 Succinyl-diaminopimelate desuccinylase {Neisseria 99.77
d1z2la1293 Allantoate amidohydrolase AllC catalytic domain {E 99.76
d1cg2a2113 Carboxypeptidase G2 {Pseudomonas sp., strain rs-16 99.76
d1z2la2117 Allantoate amidohydrolase AllC {Escherichia coli [ 99.67
d1tkja1277 Aminopeptidase {Streptomyces griseus [TaxId: 1911] 99.51
d1r3na2116 Peptidase-like beta-alanine synthase {Yeast (Sacch 99.51
d1lfwa2196 Aminopeptidase PepV {Lactobacillus delbrueckii [Ta 99.45
d1rtqa_291 Aminopeptidase {Aeromonas proteolytica [TaxId: 671 99.42
d2afwa1329 Glutaminyl-peptide cyclotransferase, QPCT {Human ( 99.24
d1de4c3294 Transferrin receptor ectodomain, protease-like dom 99.22
d3bi1a3304 Glutamate carboxypeptidase II FOLH1 {Human (Homo s 99.16
d1y0ya2255 Frv operon protein FrvX, catalytic domain {Pyrococ 97.94
d1y0ya2255 Frv operon protein FrvX, catalytic domain {Pyrococ 97.91
d1fnoa3113 Peptidase T (tripeptidase) {Salmonella typhimurium 97.49
d1y7ea2322 Probable aminopeptidase ApeA {Borrelia burgdorferi 93.35
d1lama1325 Leucine aminopeptidase, C-terminal domain {Cow (Bo 89.61
d1y7ea2322 Probable aminopeptidase ApeA {Borrelia burgdorferi 88.52
d1gyta2325 Leucine aminopeptidase, C-terminal domain {Escheri 85.73
>d1xmba1 c.56.5.4 (A:37-215,A:335-428) IAA-amino acid hydrolase, catalytic domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Bacterial dinuclear zinc exopeptidases
domain: IAA-amino acid hydrolase, catalytic domain
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=6.8e-35  Score=268.69  Aligned_cols=261  Identities=49%  Similarity=0.883  Sum_probs=204.9

Q ss_pred             hHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhCCCceeecCCCceEEEEEcCCCCCEEEEEEecccCCCCCCCCCcc
Q 013571           53 FFEWMRRIRRRIHENPELGFEEYETSQLVRSELDSLGIEYTWPVAKTGIVASVGSGGEPWFGLRAEMDALPLQEMVEWEH  132 (440)
Q Consensus        53 ~~~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nv~~~~~~~~~~~i~~~~H~D~vp~~~~~~~~~  132 (440)
                      ++++++++.|+|+++|+++++|.++++||.++|+++|++++...+++++++.++++++|+|+|.++||.+|..+...+||
T Consensus        11 ~~~~li~~rr~lh~~PEl~~~E~~T~~~i~~~L~~~g~~~~~~~~~tg~~a~~~~~~~~~i~~rad~Dalp~~e~~~~~~   90 (273)
T d1xmba1          11 VFDWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPVAITGVIGYIGTGEPPFVALRADMDALPIQEGVEWEH   90 (273)
T ss_dssp             -----------HHHSCCCTTCCHHHHHHHHHHHHHHTCCEEEEETTTEEEEEEESSSSCEEEEEEECCCBSCCCCCCSTT
T ss_pred             HHHHHHHHHHHHHhCcCcCCcHHHHHHHHHHHHHHCCCeEEecCCceEEEEEECCCcceEEEEeccccccccccccCccc
Confidence            44999999999999999999999999999999999999998777788999999877779999999999999999999999


Q ss_pred             cccCCCcccccchhHHHHHHHHHHHHHHhcccCCCceEEEEEeccCCcccchHHHHHcCCCCCCCEEEEeccCCCCCCCc
Q 013571          133 KSKNNGKMHGCGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGYGGAYYMIKEGAVDKFQGMFGIHISPVLPTGT  212 (440)
Q Consensus       133 ~~~~~g~i~GrG~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~G~~~l~~~~~~~~~d~~~~~~~~~~~~~g~  212 (440)
                      ....+|++|+||+|++++++|++++.|++....++++|.|+|+++||+++|+..|+++|.++++|.++.+|+.|..|.|.
T Consensus        91 ~s~~~g~~HaCGHd~h~a~~l~aa~~l~~~~~~~~g~v~~ifqPaEE~~~Ga~~mi~~G~~~~vd~~~~~H~~~~~~~G~  170 (273)
T d1xmba1          91 KSKIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLSARIPFGK  170 (273)
T ss_dssp             CCSSTTCBCCSSHHHHHHHHHHHHHHHHHTGGGCSSEEEEEEECCTTTTCHHHHHHHTTTTTTEEEEEEEEEEEEEETTC
T ss_pred             ccCCCCcccccccchHHHHHHHHHHHHHHhhhcCCCeEEEEEecccccccchhHHHHcCCcCCCCeeEEEeecCCCCcch
Confidence            99999999999999999999999999998877799999999999999999999999999999999999999888888887


Q ss_pred             ccccCCCcccceeEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCCeEEEEEEEecCCcccccccce
Q 013571          213 VGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQAGNIIPEIV  292 (440)
Q Consensus       213 ~~~~~g~~~~g~~~~~i~v~G~~~Hss~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~~~~i~gG~~~n~iP~~a  292 (440)
                      +..+.|..     .   .                                                              
T Consensus       171 i~~~~G~~-----m---a--------------------------------------------------------------  180 (273)
T d1xmba1         171 AASRAGSF-----L---T--------------------------------------------------------------  180 (273)
T ss_dssp             EEECSEEE-----E---E--------------------------------------------------------------
T ss_pred             hhcccchh-----h---h--------------------------------------------------------------
Confidence            65553221     0   0                                                              


Q ss_pred             EEEEEEecCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEEeccccCCCCCcCCCHHHHHHHHHHHHhhcCCCCcccCCCC
Q 013571          293 RFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVE  372 (440)
Q Consensus       293 ~~~~~~R~~~~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  372 (440)
                                                                         .+|...++.+..+.+..+|.+.+....+.
T Consensus       181 ---------------------------------------------------~nd~~~~~~~~~~a~~~~G~~av~~~~P~  209 (273)
T d1xmba1         181 ---------------------------------------------------VNNKDLYKQFKKVVRDLLGQEAFVEAAPV  209 (273)
T ss_dssp             ---------------------------------------------------------------------ECGGEEECCCB
T ss_pred             ---------------------------------------------------hhhhHhHHHHHHHHHHHhccccccccCch
Confidence                                                               00011122223333344455444444578


Q ss_pred             cccccHHHHHHHhccceEEEccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhccc
Q 013571          373 MGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLDNL  435 (440)
Q Consensus       373 ~g~tD~~~~~~~~p~v~~~~G~~~~~~g~~~~~H~~dE~i~~~~l~~~~~~~~~~~~~~~~~~  435 (440)
                      .|+.|+++|.+.+|.+++++|.+... ......|++.+.++.+.+..++++++.++.++|+++
T Consensus       210 mgsEDFs~~~~~vPg~~~~lG~~~~~-~g~~~~Hsp~F~idE~aL~~Gv~~~~~~Al~~L~e~  271 (273)
T d1xmba1         210 MGSEDFSYFAETIPGHFSLLGMQDET-NGYASSHSPLYRINEDVLPYGAAIHASMAVQYLKEK  271 (273)
T ss_dssp             CCCCTHHHHHTTSCEEEEEEEEECTT-CCSCCTTCTTCCCCGGGHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHhCCceEEEEccccCC-CCCcCCCCCCccCCHHHHHHHHHHHHHHHHHHHHhh
Confidence            89999999999999999888877654 234568999999999999999999999999998764
>d1ysja1 c.56.5.4 (A:4-177,A:293-379) Protein YxeP {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1vgya1 c.56.5.4 (A:2-180,A:294-376) Succinyl-diaminopimelate desuccinylase, catalytic domain {Neisseria meningitidis [TaxId: 487]} Back     information, alignment and structure
>d1cg2a1 c.56.5.4 (A:26-213,A:327-414) Carboxypeptidase G2, catalytic domain {Pseudomonas sp., strain rs-16 [TaxId: 306]} Back     information, alignment and structure
>d1lfwa1 c.56.5.4 (A:1-186,A:383-468) Aminopeptidase PepV {Lactobacillus delbrueckii [TaxId: 1584]} Back     information, alignment and structure
>d1fnoa4 c.56.5.4 (A:1-207,A:321-408) Peptidase T (tripeptidase), catalytic domain {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1ysja2 d.58.19.1 (A:178-292) Protein YxeP {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1vhea2 c.56.5.4 (A:3-72,A:163-367) Hypothetical protein YsdC, catalytic domain {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1yloa2 c.56.5.4 (A:1-66,A:148-345) Aminopeptidase YpdE {Shigella flexneri [TaxId: 623]} Back     information, alignment and structure
>d1xmba2 d.58.19.1 (A:216-334) IAA-amino acid hydrolase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d2grea2 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptidase YhfE {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1vhoa2 c.56.5.4 (A:3-69,A:153-333) Putative endoglucanase TM1048, catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2fvga2 c.56.5.4 (A:1-64,A:149-339) Endoglucanase TM1049 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1r3na1 c.56.5.4 (A:18-247,A:364-455) Peptidase-like beta-alanine synthase, catalytic domain {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} Back     information, alignment and structure
>d1vgya2 d.58.19.1 (A:181-293) Succinyl-diaminopimelate desuccinylase {Neisseria meningitidis [TaxId: 487]} Back     information, alignment and structure
>d1z2la1 c.56.5.4 (A:4-212,A:330-413) Allantoate amidohydrolase AllC catalytic domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1cg2a2 d.58.19.1 (A:214-326) Carboxypeptidase G2 {Pseudomonas sp., strain rs-16 [TaxId: 306]} Back     information, alignment and structure
>d1z2la2 d.58.19.1 (A:213-329) Allantoate amidohydrolase AllC {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1tkja1 c.56.5.4 (A:1-277) Aminopeptidase {Streptomyces griseus [TaxId: 1911]} Back     information, alignment and structure
>d1r3na2 d.58.19.1 (A:248-363) Peptidase-like beta-alanine synthase {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} Back     information, alignment and structure
>d1lfwa2 d.58.19.1 (A:187-382) Aminopeptidase PepV {Lactobacillus delbrueckii [TaxId: 1584]} Back     information, alignment and structure
>d1rtqa_ c.56.5.4 (A:) Aminopeptidase {Aeromonas proteolytica [TaxId: 671]} Back     information, alignment and structure
>d2afwa1 c.56.5.8 (A:33-361) Glutaminyl-peptide cyclotransferase, QPCT {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1de4c3 c.56.5.5 (C:122-189,C:383-608) Transferrin receptor ectodomain, protease-like domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3bi1a3 c.56.5.5 (A:57-117,A:351-593) Glutamate carboxypeptidase II FOLH1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1y0ya2 c.56.5.4 (A:164-351,A:6-72) Frv operon protein FrvX, catalytic domain {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1y0ya2 c.56.5.4 (A:164-351,A:6-72) Frv operon protein FrvX, catalytic domain {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1fnoa3 d.58.19.1 (A:208-320) Peptidase T (tripeptidase) {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1y7ea2 c.56.5.4 (A:4-100,A:234-458) Probable aminopeptidase ApeA {Borrelia burgdorferi [TaxId: 139]} Back     information, alignment and structure
>d1lama1 c.56.5.3 (A:160-484) Leucine aminopeptidase, C-terminal domain {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1y7ea2 c.56.5.4 (A:4-100,A:234-458) Probable aminopeptidase ApeA {Borrelia burgdorferi [TaxId: 139]} Back     information, alignment and structure
>d1gyta2 c.56.5.3 (A:179-503) Leucine aminopeptidase, C-terminal domain {Escherichia coli, PepA [TaxId: 562]} Back     information, alignment and structure