Citrus Sinensis ID: 013597

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------44
Protein Sequence
MSSTPGTHSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPLSVRTKVRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKADGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGITVFDKLEKITYDSLPDLEIFVDQD
Secondary Structure (PSIPRED)
cccccccccEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEEcccccccEEEEEEEEEEccccEEEEcccccccccccccccEEEEEEEEEcEEEccEEEEEEEEEEcccccEEEEEEEEEEEEcccEEEEEEEEEEcccEEEEEEEEEcccccEEEEEEEEEEcccccEEEcccccccccccccccccccccEEEEccccEEEEEEEEEEcccccccccccccccccEEEEEEEEcccccccEEEEEEEEccccccccEEEEEEEcccEEEEcccEEEEEEEEEccccccccEEEEEEccccccccEEEEccccEEEEcccccccEEEEEEEEEEccccEEEEccEEEEEccccEEEcccccEEEEEccc
Secondary Structure Prediction (SSPRO)
ccccccccEEEEEEEEccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccccccccccccccccccccccccEEEEEEEEEEEEEEcccccEEEEEEEEEEEEccccEEEcccccccccccccccccccEEEEEEEHHcccEEEEEEEEEEcccccEEEEEEEEEEEEccccEEEEEEEcccccEEEEEEEEEcccccEEEEEEEEccccccEEEEcccccccccccccccccccccccEEccccEEEEEEEEEcccccccccccccccEEEEEEEEEEEcccccccEEEcccccccccccccEEEEEEEcccEEEEEEcEEEEEEEEEccccccccEEEEEEccccccEEEEEEcccEccEcccccccccEEEEEEEEEccccEEEEcEEEEEEccccEEEEccccEEEEEccc
Coil and Loop (DISEMBL)
msstpgthsLAFRVMRlcrpslhvepplrvdptdlfigedifddpiaasnlpplissdvttnkssdltyRSRFLLhdsadsiglsgllvlpqafgaiylgeTFCSYISinnsstlevRDVVIKAEIQTDKQRILLLdtskspvesiraggrydfIVEHDVKELGAHTLVCTAlysdgegerkyLPQFFKFIvsnplsvrtKVRVVKEITFLEACIENhtksnlymdqvefepsqnwsatmlkadgphsdynaqsreifkppvlirsgggiHNYLYQLKmlshgssspvkvqgsnvlgklqitwrtnlgepgrlqtQQILGTTITSKEIElnvvevpsvvgidkpfllklkltnqtdkeqgpfeiwlsqndsdeekVVMINGLRIMalapveafgstdFHLNLIATKLGVQRITGITVFDKLekitydslpdleifvdqd
Flexible Loop (DISEMBL)
msstpgthslAFRVMRLCrpslhvepplrvDPTDLFIGEDIFDDPIAasnlpplissdvttnksSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAeiqtdkqrillldtskspvesiRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFivsnplsvrtKVRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKADGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITWrtnlgepgrlqtQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLtnqtdkeqgpfeiwlsqndsdEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGITVFDKlekitydslpdleifvdqd
Low Complexity Region (SEG)
MSSTPGTHSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPLSVRTKVRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKADGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITWRTNLGEPGRlqtqqilgttitSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGITVFDKLEKITYDSLPDLEIFVDQD
Disordered region (IsUnstruct)
*********LAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLIS*********DLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPLSVRTKVRVVKEITFLEACIENHTKSNLYMDQVEF*************************EIFKPPVLIRSGGGIHNYLYQLKMLSHG****VKVQGSNVLGKLQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTN*********EIW**********VVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGITVFDKLEKITYDSLPDLEIFV***
Disordered Region (DISOPRED)
*****GT**LAFRVMRLCRPSLHVEPPLRVDPTDLFIG******************************************SIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDK*******************GRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPLSVRTKVRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATM********************PVLIRSGGGIHNYLYQLKM*************SNVLGKLQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGITVFDKLEKITYDSLPDLEIFVDQD
Disordered Region (DISEMBL)
MSSTPGTHSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPLSVRTKVRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKADGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSH********QGSNVLGKLQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGITVFDKLEKITYDSLPDLEIFVDQD
Disordered Region (DISPRO)
*****GTHSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGE*************************************DSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPLSVRTKVRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKA***********REIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGITVFDKLEKITYDSLPDLEIFVDQ*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSSTPGTHSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPLSVRTKVRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKADGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGITVFDKLEKITYDSLPDLEIFVDQD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	439	2.2.26 [Sep-21-2011]
Q6PBY7	412	UPF0533 protein C5orf44 h	yes	no	0.861	0.917	0.330	9e-53
Q5RCG0	417	UPF0533 protein C5orf44 h	yes	no	0.858	0.904	0.321	5e-52
A5PLN9	417	UPF0533 protein C5orf44 O	yes	no	0.858	0.904	0.318	8e-52
Q3TIR1	417	UPF0533 protein C5orf44 h	yes	no	0.867	0.913	0.319	2e-50
A7MB76	417	UPF0533 protein C5orf44 h	yes	no	0.858	0.904	0.314	2e-50
Q5M887	418	UPF0533 protein C5orf44 h	yes	no	0.870	0.913	0.319	3e-50
Q0VFT9	412	UPF0533 protein C5orf44 h	yes	no	0.867	0.924	0.323	7e-50
Q6GPR5	414	UPF0533 protein C5orf44 h	N/A	no	0.872	0.925	0.320	3e-48
A8WX89	401	UPF0533 protein CBG04321	N/A	no	0.876	0.960	0.304	3e-47
Q95QQ2	401	UPF0533 protein C56C10.7	yes	no	0.879	0.962	0.295	6e-47

>sp|Q6PBY7|CE044_DANRE UPF0533 protein C5orf44 homolog OS=Danio rerio GN=zgc:73187 PE=2 SV=2

 Score =  207 bits (528), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 141/427 (33%), Positives = 222/427 (51%), Gaps = 49/427 (11%)

Query: 8   HSLAFRVMRLCRPSLHVEPPLRVD----PTDLFIGEDIFDDPIAASNLPPLISSDVTTNK 63
           H LA +VMRL +P+L    P+  +    P DLF+                L+  D +T K
Sbjct: 10  HLLALKVMRLTKPTLFTNMPVTCEDRDLPGDLFLR---------------LMKDDPSTVK 54

Query: 64  SSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIK 123
                          A+++ L  +L LPQ FG I+LGETF SYIS++N S+  V+D+++K
Sbjct: 55  G--------------AETLILGEMLTLPQNFGNIFLGETFSSYISVHNDSSQVVKDILVK 100

Query: 124 AEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKY 183
           A++QT  QR L L  S S V  ++     D ++ H+VKE+G H LVC   Y+   GE+ Y
Sbjct: 101 ADLQTSSQR-LNLSASNSAVSELKPECCIDDVIHHEVKEIGTHILVCAVSYTTQTGEKLY 159

Query: 184 LPQFFKFIVSNPLSVRTKVRVVK-EITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLK 242
             +FFKF V  PL V+TK    + +  FLEA I+N T S ++M++V  EPS  ++ T L 
Sbjct: 160 FRKFFKFQVLKPLDVKTKFYNAETDEVFLEAQIQNITTSPMFMEKVSLEPSMMYNVTELN 219

Query: 243 --ADGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQ 300
             A G  S  +   +  +  P+  R       YLY LK     +     ++G  V+GKL 
Sbjct: 220 NVASGDESSESTFGKMSYLQPLDTR------QYLYCLKPKPEFAEKAGVIKGVTVIGKLD 273

Query: 301 ITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQG 360
           I W+TNLGE GRLQT Q+        ++ L++  +P  V +++PF +  K+TN +++   
Sbjct: 274 IVWKTNLGERGRLQTSQLQRMAPGYGDVRLSLEFIPDTVDLEEPFDITCKITNCSERT-- 331

Query: 361 PFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGITVFDK 420
             ++ L   ++       ++G ++  L+P     S    L L+++  G+Q I+G+ + D 
Sbjct: 332 -MDLLLEMCNTRSVHWCGVSGRQLGKLSPS---ASLSIPLKLLSSVQGLQSISGLRLTDT 387

Query: 421 LEKITYD 427
             K TY+
Sbjct: 388 FLKRTYE 394

Danio rerio (taxid: 7955)

>sp|Q5RCG0|CE044_PONAB UPF0533 protein C5orf44 homolog OS=Pongo abelii PE=2 SV=1

 Score =  205 bits (522), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 139/433 (32%), Positives = 217/433 (50%), Gaps = 56/433 (12%)

Query: 8   HSLAFRVMRLCRPSLHVEPPLRVD----PTDLFIGEDIFDDPIAASNLPPLISSDVTTNK 63
           H LA +VMRL +P+L    P+  +    P DLF  + + DDP                  
Sbjct: 10  HLLALKVMRLTKPTLFTNIPVTCEERDLPGDLF-NQLMRDDPSTV--------------- 53

Query: 64  SSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIK 123
                        + A+ + L  +L LPQ FG I+LGETF SYIS++N S   V+D+++K
Sbjct: 54  -------------NGAEVLMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDILVK 100

Query: 124 AEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKY 183
           A++QT  QR L L  S + V  ++     D ++ H+VKE+G H LVC   Y+   GE+ Y
Sbjct: 101 ADLQTSSQR-LNLSASNAAVAELKPDCCIDDVIHHEVKEIGTHILVCAVSYTTQAGEKMY 159

Query: 184 LPQFFKFIVSNPLSVRTK-------VRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNW 236
             +FFKF V  PL V+TK       +  V +  FLEA I+N T S ++M++V  EPS  +
Sbjct: 160 FRKFFKFQVLKPLDVKTKFYNAESDLSSVTDEVFLEAQIQNMTTSPMFMEKVSLEPSIMY 219

Query: 237 SATMLKA--DGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSN 294
           + T L +      S     SR   +P            YLY LK     +     ++G  
Sbjct: 220 NVTELNSVSQAGESVSTFGSRAYLQP-------MDTRQYLYCLKPKKEFAEKAGIIKGVT 272

Query: 295 VLGKLQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQ 354
           V+GKL I W+TNLGE GRLQT Q+        ++ L++  +P  V +++PF +  K+TN 
Sbjct: 273 VIGKLDIVWKTNLGERGRLQTSQLQRMAPGYGDVRLSLEAIPDTVNLEEPFHITCKITNC 332

Query: 355 TDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITG 414
           +++     ++ L   +++      I+G ++  L P  +       L L+++  G+Q I+G
Sbjct: 333 SER---TMDLVLEMCNTNSIHWCGISGRQLGKLHPSSSLC---LALTLLSSVQGLQSISG 386

Query: 415 ITVFDKLEKITYD 427
           + + D   K TY+
Sbjct: 387 LRLTDTFLKRTYE 399

Pongo abelii (taxid: 9601)

>sp|A5PLN9|CE044_HUMAN UPF0533 protein C5orf44 OS=Homo sapiens GN=C5orf44 PE=2 SV=2

 Score =  204 bits (520), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 138/433 (31%), Positives = 219/433 (50%), Gaps = 56/433 (12%)

Query: 8   HSLAFRVMRLCRPSLHVEPPLRVD----PTDLFIGEDIFDDPIAASNLPPLISSDVTTNK 63
           H LA +VMRL +P+L    P+  +    P DLF  + + DDP                  
Sbjct: 10  HLLALKVMRLTKPTLFTNIPVTCEEKDLPGDLF-NQLMRDDPSTV--------------- 53

Query: 64  SSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIK 123
                        + A+ + L  +L LPQ FG I+LGETF SYIS++N S   V+D+++K
Sbjct: 54  -------------NGAEVLMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDILVK 100

Query: 124 AEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKY 183
           A++QT  QR L L  S + V  ++     D ++ H+VKE+G H LVC   Y+   GE+ Y
Sbjct: 101 ADLQTSSQR-LNLSASNAAVAELKPDCCIDDVIHHEVKEIGTHILVCAVSYTTQAGEKMY 159

Query: 184 LPQFFKFIVSNPLSVRTK-------VRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNW 236
             +FFKF V  PL V+TK       +  V +  FLEA I+N T S ++M++V  EPS  +
Sbjct: 160 FRKFFKFQVLKPLDVKTKFYNAESDLSSVTDEVFLEAQIQNMTTSPMFMEKVSLEPSIMY 219

Query: 237 SATMLKADGPHSDYNAQ--SREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSN 294
           + T L +     +  +   SR   +P            YLY LK  +  +     ++G  
Sbjct: 220 NVTELNSVSQAGECVSTFGSRAYLQP-------MDTRQYLYCLKPKNEFAEKAGIIKGVT 272

Query: 295 VLGKLQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQ 354
           V+GKL I W+TNLGE GRLQT Q+        ++ L++  +P  V +++PF +  K+TN 
Sbjct: 273 VIGKLDIVWKTNLGERGRLQTSQLQRMAPGYGDVRLSLEAIPDTVNLEEPFHITCKITNC 332

Query: 355 TDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITG 414
           +++     ++ L   +++      I+G ++  L P  +       L L+++  G+Q I+G
Sbjct: 333 SER---TMDLVLEMCNTNSIHWCGISGRQLGKLHPSSSLC---LALTLLSSVQGLQSISG 386

Query: 415 ITVFDKLEKITYD 427
           + + D   K TY+
Sbjct: 387 LRLTDTFLKRTYE 399

Homo sapiens (taxid: 9606)

>sp|Q3TIR1|CE044_MOUSE UPF0533 protein C5orf44 homolog OS=Mus musculus PE=2 SV=1

 Score =  200 bits (509), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 137/429 (31%), Positives = 220/429 (51%), Gaps = 48/429 (11%)

Query: 8   HSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDL 67
           H LA +VMRL +P+L    P+  +  DL    D+F+          L+  D +T      
Sbjct: 10  HLLALKVMRLTKPTLFTNIPVTCEEKDL--PGDLFNQ---------LMKDDPST------ 52

Query: 68  TYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQ 127
                    + A+ + L  +L LPQ FG I+LGETF SYIS++N S   V+D+++KA++Q
Sbjct: 53  --------VNGAEILMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDILVKADLQ 104

Query: 128 TDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQF 187
           T  QR L L  S + V  ++     D ++ H+VKE+G H LVC   Y+   GE+ Y  +F
Sbjct: 105 TSSQR-LNLSASNAAVAELKPDCCIDDVIHHEVKEIGTHILVCAVSYTTQGGEKMYFRKF 163

Query: 188 FKFIVSNPLSVRTK-------VRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATM 240
           FKF V  PL V+TK       +  V +  FLEA I+N T S ++M++V  EPS  ++ T 
Sbjct: 164 FKFQVLKPLDVKTKFYNAESDLSSVTDEVFLEAQIQNITTSPMFMEKVSLEPSIMYNVTE 223

Query: 241 LKADGPHSDYNAQ--SREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGK 298
           L +     +  +   SR   +P            YLY LK     +     ++G  V+GK
Sbjct: 224 LNSVTQAGECISTFGSRGYLQPM-------DTRQYLYCLKPKKEFAEKAGIIKGVTVIGK 276

Query: 299 LQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKE 358
           L I W+TNLGE GRLQT Q+        ++ L++  +P  V +++PF +  K+TN +++ 
Sbjct: 277 LDIVWKTNLGERGRLQTSQLQRMAPGYGDVRLSLEAIPDTVNLEEPFHITCKITNCSERM 336

Query: 359 QGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGITVF 418
               ++ L   +++      I+G ++  L P  +       L L+++  G+Q ++G+ + 
Sbjct: 337 ---MDLVLEMCNTNSIHWCGISGRQLGKLHPSSSLC---LALTLLSSVQGLQSVSGLRLT 390

Query: 419 DKLEKITYD 427
           D   K TY+
Sbjct: 391 DTFLKRTYE 399

Mus musculus (taxid: 10090)

>sp|A7MB76|CE044_BOVIN UPF0533 protein C5orf44 homolog OS=Bos taurus PE=2 SV=1

 Score =  200 bits (509), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 136/433 (31%), Positives = 216/433 (49%), Gaps = 56/433 (12%)

Query: 8   HSLAFRVMRLCRPSLHVEPPLRVD----PTDLFIGEDIFDDPIAASNLPPLISSDVTTNK 63
           H LA +VMRL +P+L    P+  +    P DLF  + + DDP                  
Sbjct: 10  HLLALKVMRLTKPTLFTNIPVTCEEKDLPGDLF-NQLMRDDPSTV--------------- 53

Query: 64  SSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIK 123
                        + A+ + L  +L LPQ FG I+LGETF SYIS++N S   V+D+++K
Sbjct: 54  -------------NGAEILMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDILVK 100

Query: 124 AEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKY 183
           A++QT  QR L L  S + V  ++     D ++ H+VKE+G H LVC   Y+   GE+ Y
Sbjct: 101 ADLQTSSQR-LNLSASNAAVAELKPDCCIDDVIHHEVKEIGTHILVCAVSYTTQSGEKMY 159

Query: 184 LPQFFKFIVSNPLSVRTK-------VRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNW 236
             +FFKF V  PL V+TK       +  V +  FLEA I+N T S ++M++V  EPS  +
Sbjct: 160 FRKFFKFQVLKPLDVKTKFYNAESDLSSVTDEVFLEAQIQNITTSPMFMEKVSLEPSIMY 219

Query: 237 SATMLKADGPHSDYNAQ--SREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSN 294
           +   L +     +      SR   +P            YLY LK     +     ++G  
Sbjct: 220 NVAELNSVNQAGECVTTFGSRAYLQP-------MDTRQYLYCLKPKKEFAEKAGIIKGVT 272

Query: 295 VLGKLQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQ 354
           V+GKL I W+TNLGE GRLQT Q+        ++ L++  +P  V +++PF +  K+TN 
Sbjct: 273 VIGKLDIVWKTNLGERGRLQTSQLQRMAPGYGDVRLSLEAIPDTVNLEEPFHITCKITNC 332

Query: 355 TDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITG 414
           +++     ++ L   +++      I+G ++  L P  +       L L+++  G+Q ++G
Sbjct: 333 SER---TMDLVLEMCNTNSIHWCGISGRQLGKLHPSSSLC---LALTLLSSVQGLQSVSG 386

Query: 415 ITVFDKLEKITYD 427
           + + D   K TY+
Sbjct: 387 LRLTDTFLKRTYE 399

Bos taurus (taxid: 9913)

>sp|Q5M887|CE044_RAT UPF0533 protein C5orf44 homolog OS=Rattus norvegicus PE=2 SV=2

 Score =  199 bits (507), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 137/429 (31%), Positives = 218/429 (50%), Gaps = 47/429 (10%)

Query: 8   HSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDL 67
           H LA +VMRL +P+L    P+  +  DL    D+F+          L+  D +T      
Sbjct: 10  HLLALKVMRLTKPTLFTNIPVTCEEKDL--PGDLFNQ---------LMKDDPST------ 52

Query: 68  TYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQ 127
                    + A+ + L  +L LPQ FG I+LGETF SYIS++N S   V+D+++KA++Q
Sbjct: 53  --------VNGAEILMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDILVKADLQ 104

Query: 128 TDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQF 187
           T  QR L L  S + V  ++     D ++ H+VKE+G H LVC   Y+   GE+ Y  +F
Sbjct: 105 TSSQR-LNLSASNAAVAELKPDCCIDDVIHHEVKEIGTHILVCAVSYTTQGGEKMYFRKF 163

Query: 188 FKFIVSNPLSVRTK-------VRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATM 240
           FKF V  PL V+TK       +  V +  FLEA I+N T S ++M++V  EPS  ++ T 
Sbjct: 164 FKFQVLKPLDVKTKFYNAESDLSSVTDEVFLEAQIQNITTSPMFMEKVSLEPSIMYNVTE 223

Query: 241 LKADGPHSDYNAQ--SREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGK 298
           L +     +  +   SR   +P            YLY LK     +     ++G  V+GK
Sbjct: 224 LNSVNQAGECVSTFGSRGYLQPM-------DTRQYLYCLKPKKEFAEKAGIIKGVTVIGK 276

Query: 299 LQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKE 358
           L I W+TNLGE GRLQT Q+        ++ L++  +P  V +++PF +  K+TN + + 
Sbjct: 277 LDIVWKTNLGERGRLQTSQLQRMAPGYGDVRLSLEAIPDTVNLEEPFHITCKITNCSSER 336

Query: 359 QGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGITVF 418
               ++ L   ++       I+G ++  L P  +       L L+++  G+Q ++G+ + 
Sbjct: 337 T--MDLVLEMCNTTSIHWCGISGRQLGKLHPSSSLC---LALTLLSSVQGLQSVSGLRLT 391

Query: 419 DKLEKITYD 427
           D   K TY+
Sbjct: 392 DTFLKRTYE 400

Rattus norvegicus (taxid: 10116)

>sp|Q0VFT9|CE044_XENTR UPF0533 protein C5orf44 homolog OS=Xenopus tropicalis PE=2 SV=1

 Score =  198 bits (503), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 137/424 (32%), Positives = 220/424 (51%), Gaps = 43/424 (10%)

Query: 8   HSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDL 67
           H LA +VMRL +P+L    P+  +  DL    D+F           L+  D +T K    
Sbjct: 10  HLLALKVMRLTKPTLFTNIPVTCEERDL--PGDLFS---------TLMKDDPSTVKG--- 55

Query: 68  TYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQ 127
                      A+++ L  +L LPQ FG I+LGETF SYIS++N S   V+D+ +KA++Q
Sbjct: 56  -----------AETLMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDIQVKADLQ 104

Query: 128 TDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQF 187
           T  QR L L  S + V  ++     D ++ H+VKE+G H LVC   Y+   GE+ Y  +F
Sbjct: 105 TSSQR-LNLSASTAVVSELKPDSCIDDVIHHEVKEIGTHILVCAVSYTTQTGEKMYFRKF 163

Query: 188 FKFIVSNPLSVRTKVRVVK-EITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKADGP 246
           FKF V  PL V+TK    + +  FLEA I+N T S ++M++V  EPS  ++ + L     
Sbjct: 164 FKFQVLKPLDVKTKFYNAETDEVFLEAQIQNITTSPMFMEKVSLEPSIMYNVSELNTVIT 223

Query: 247 HSD-YNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITWRT 305
           + D  +    + +  P+  R       YLY LK     +     ++G  V+GKL I W+T
Sbjct: 224 NGDGCSTFGTKTYLQPLDTR------QYLYCLKPKPEFAEKAGVIKGVTVIGKLDIVWKT 277

Query: 306 NLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIW 365
           NLGE GRLQT Q+        ++ L++  +P  V +++PF +  K+TN + +     ++ 
Sbjct: 278 NLGERGRLQTSQLQRMAPGYGDVRLSIETIPDTVRLEEPFDITCKITNCSSERT--MDLV 335

Query: 366 LSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLN--LIATKLGVQRITGITVFDKLEK 423
           L   +++      ++G ++  L P     S+  HL   L+++  G+Q ++G+ + D   K
Sbjct: 336 LEMCNTNAIHWCGVSGRQLGKLHP-----SSSLHLTLALLSSVQGLQSVSGLRLTDTFLK 390

Query: 424 ITYD 427
            TY+
Sbjct: 391 RTYE 394

Xenopus tropicalis (taxid: 8364)

>sp|Q6GPR5|CE044_XENLA UPF0533 protein C5orf44 homolog OS=Xenopus laevis PE=2 SV=2

 Score =  192 bits (489), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 136/424 (32%), Positives = 218/424 (51%), Gaps = 41/424 (9%)

Query: 8   HSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDL 67
           H LA +VMRL +P+L    P+  +  DL    D+F           L+  D +T K +++
Sbjct: 10  HLLALKVMRLTKPTLFTNIPVTCEEKDL--PGDLFS---------TLMKDDPSTVKGAEI 58

Query: 68  TYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQ 127
                         + L  +L LPQ FG I+LGETF SYIS++N S   V+DV +KA++Q
Sbjct: 59  --------------LMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDVQVKADLQ 104

Query: 128 TDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQF 187
           T  QR L L  S + V  ++     D ++ H+VKE+G H LVC   Y+   GE+ Y  +F
Sbjct: 105 TSSQR-LNLSASSAVVADLKPDSCIDDVIHHEVKEIGTHILVCAVSYTIQSGEKMYFRKF 163

Query: 188 FKFIVSNPLSVRTKVRVVK-EITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKADGP 246
           FKF V  PL V+TK    + +  FLEA I+N T S ++M++V  EPS  ++ + L     
Sbjct: 164 FKFQVLKPLDVKTKFYNAETDEVFLEAQIQNITTSPMFMEKVSLEPSIMYNVSELNTVIT 223

Query: 247 HSDYNAQSR---EIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITW 303
           + D+   S    + +  P+  R       YLY LK     +     ++G  V+GKL I W
Sbjct: 224 NGDWKGSSTFGTKTYLQPLDTR------QYLYCLKPKPEFAEKAGVIKGVTVIGKLDIVW 277

Query: 304 RTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFE 363
           +TNLGE GRLQT Q+        ++ L++  +P  V +++PF +  K+TN + +     +
Sbjct: 278 KTNLGERGRLQTSQLQRMAPGYGDVRLSIETIPDTVRLEEPFDITCKITNCSSERT--MD 335

Query: 364 IWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGITVFDKLEK 423
           + L   +++      ++G ++  L P  +   T   L+ +    G+Q ++G+ + D   K
Sbjct: 336 LVLEMCNTNAIHWSGVSGRQLGKLHPSSSLHLTLTLLSSVQ---GLQSVSGLRLTDTFLK 392

Query: 424 ITYD 427
            TY+
Sbjct: 393 RTYE 396

Xenopus laevis (taxid: 8355)

>sp|A8WX89|U533_CAEBR UPF0533 protein CBG04321 OS=Caenorhabditis briggsae GN=CBG04321 PE=3 SV=2

 Score =  189 bits (481), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 136/447 (30%), Positives = 222/447 (49%), Gaps = 62/447 (13%)

Query: 1   MSSTPGTHSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVT 60
           +S++     LA RVMRL RP        +  P D F       DP+  +    L++  V 
Sbjct: 5   ISNSSTQQLLALRVMRLARP--------KFAPLDGFS-----HDPVDPTGFGELLAGKV- 50

Query: 61  TNKSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDV 120
               ++++  SR   HD    + +   L+ PQ F  IYLGETF  Y+++ N S   V +V
Sbjct: 51  ----AEISKESR---HD----LPIGEYLIAPQMFENIYLGETFTFYVNVVNESESNVVNV 99

Query: 121 VIKAEIQTDKQRILL-LDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEG 179
            +K E+QT  QR++L        +ES +  G+   ++ H+VKE+G H L+C+  Y    G
Sbjct: 100 SLKCELQTSTQRVVLPCSVQDVTIESTKCDGQ---VISHEVKEIGQHILICSVNYKTLSG 156

Query: 180 ERKYLPQFFKFIVSNPLSVRTKVRVVK----EITFLEACIENHTKSNLYMDQVEFEPSQN 235
           E  Y  +FFKF VS P+ V+TK    +    +  +LEA IEN + SN+++++VE +PSQ+
Sbjct: 157 ENMYFRKFFKFPVSKPIDVKTKFYSAEDNANQDVYLEAQIENTSNSNMFLERVELDPSQH 216

Query: 236 WSATMLKADGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGS-- 293
           +  T +     H D   +  ++ KP         I  +L+ L        SPV V  +  
Sbjct: 217 YKVTSIS----HEDEFPEVGKLLKP-------KDIRQFLFCL--------SPVDVNNTLG 257

Query: 294 ----NVLGKLQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKL 349
                 +GKL ++WRT++GE GRLQT  +        ++ L+V + P+ V + KPF +  
Sbjct: 258 YKDLTSIGKLDMSWRTSMGEKGRLQTSALQRIAPGYGDVRLSVEKTPACVDVQKPFEVAC 317

Query: 350 KLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGV 409
           +L N +++     ++ L Q  + +  +   +G+ +  L P       DF LN+    +G+
Sbjct: 318 RLYNCSERALD-LQLRLEQPSNRQLVICSPSGVSLGQLPPSRY---VDFALNVFPVAVGI 373

Query: 410 QRITGITVFDKLEKITYDSLPDLEIFV 436
           Q I+GI + D   K  Y+     +IFV
Sbjct: 374 QSISGIRITDTFTKRHYEHDDIAQIFV 400

Caenorhabditis briggsae (taxid: 6238)

>sp|Q95QQ2|U533_CAEEL UPF0533 protein C56C10.7 OS=Caenorhabditis elegans GN=C56C10.7 PE=1 SV=1

 Score =  188 bits (478), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 133/450 (29%), Positives = 218/450 (48%), Gaps = 64/450 (14%)

Query: 1   MSSTPGTHS----LAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLIS 56
           M+  P + S    LA RVMRL RP        +  P D F       DP+  +    L++
Sbjct: 1   MADNPASSSSQQLLALRVMRLARP--------KFAPVDGFS-----HDPVDPTGFGELLA 47

Query: 57  SDVTTNKSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLE 116
             V     S+++  SR         + +   L+ PQ F  IYLGETF  Y+++ N S   
Sbjct: 48  GKV-----SEISKESR-------QDLPIGEYLIAPQMFENIYLGETFTFYVNVVNESEKT 95

Query: 117 VRDVVIKAEIQTDKQRILL-LDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYS 175
           V  V +K E+QT  QR++L      + +ES +  G+   ++ H+VKE+G H L+C+  Y 
Sbjct: 96  VSSVSLKCELQTSTQRVVLPCSVQDATIESSKCEGQ---VISHEVKEIGQHILICSVNYK 152

Query: 176 DGEGERKYLPQFFKFIVSNPLSVRTKVRVVK----EITFLEACIENHTKSNLYMDQVEFE 231
              GE  Y  +FFKF VS P+ V+TK    +    +  +LEA IEN + +N+++++VE +
Sbjct: 153 TSNGENMYFRKFFKFPVSKPIDVKTKFYSAEDNANQDVYLEAQIENTSNANMFLEKVELD 212

Query: 232 PSQNWSATMLKADGPHSDYNAQSREIFKPP-----VLIRSGGGIHNYLYQLKMLSHGSSS 286
           PSQ+++ T +     H D      ++ KP      +   +   +HN L    + S     
Sbjct: 213 PSQHYNVTSIA----HEDEFGDVGKLLKPKDIRQFLFCLTPADVHNTLGYKDLTS----- 263

Query: 287 PVKVQGSNVLGKLQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFL 346
                    +GKL ++WRT++GE GRLQT  +        ++ L+V + P+ V + KPF 
Sbjct: 264 ---------IGKLDMSWRTSMGEKGRLQTSALQRIAPGYGDVRLSVEKTPACVDVQKPFE 314

Query: 347 LKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATK 406
           +  +L N +++     ++ L Q  +        +G+ +  L P +     DF LN+    
Sbjct: 315 VSCRLYNCSERALD-LQLRLEQPSNRHLVFCSPSGVSLGQLPPSQ---HVDFSLNVFPVT 370

Query: 407 LGVQRITGITVFDKLEKITYDSLPDLEIFV 436
           +G+Q I+GI + D   K  Y+     +IFV
Sbjct: 371 VGIQSISGIRITDTFTKRIYEHDDIAQIFV 400

Caenorhabditis elegans (taxid: 6239)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	439
255556003	434	expressed protein, putative [Ricinus com	0.986	0.997	0.772	0.0
225470348	438	PREDICTED: UPF0533 protein C5orf44 [Viti	0.993	0.995	0.775	0.0
356548745	440	PREDICTED: UPF0533 protein C5orf44 homol	0.977	0.975	0.759	0.0
449457717	440	PREDICTED: UPF0533 protein C5orf44-like	0.995	0.993	0.723	0.0
224079249	450	predicted protein [Populus trichocarpa]	0.972	0.948	0.737	0.0
356521339	435	PREDICTED: UPF0533 protein C5orf44-like	0.968	0.977	0.743	0.0
388496064	437	unknown [Medicago truncatula]	0.965	0.970	0.726	0.0
358346667	446	hypothetical protein MTR_084s0010 [Medic	0.965	0.950	0.712	1e-180
18407493	442	uncharacterized protein [Arabidopsis tha	0.990	0.984	0.679	1e-170
297824907	443	hypothetical protein ARALYDRAFT_483987 [	0.986	0.977	0.678	1e-169

>gi|255556003|ref|XP_002519036.1| expressed protein, putative [Ricinus communis] gi|223541699|gb|EEF43247.1| expressed protein, putative [Ricinus communis]

 Score =  704 bits (1818), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/440 (77%), Positives = 384/440 (87%), Gaps = 7/440 (1%)

Query: 1   MSSTPGTHSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVT 60
           MS+TPGTHSLAFRVMRLCRPS HV+  L VDP+DL +GEDIFDDP+AAS LPPLI S +T
Sbjct: 1   MSTTPGTHSLAFRVMRLCRPSFHVDAQLLVDPSDLIVGEDIFDDPVAASRLPPLIDSHIT 60

Query: 61  T-NKSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRD 119
               +SDL+YR+RFL    +DS GL+GLLVLPQAFGAIYLGETFCSYISINNSS  EVRD
Sbjct: 61  KLTDTSDLSYRTRFLHQHPSDSFGLTGLLVLPQAFGAIYLGETFCSYISINNSSNFEVRD 120

Query: 120 VVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEG 179
           V+IKAEIQT++QRILLLDTSK+PVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDG+G
Sbjct: 121 VIIKAEIQTERQRILLLDTSKNPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGDG 180

Query: 180 ERKYLPQFFKFIVSNPLSVRTKVRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSAT 239
           ERKYLPQFFKFIV+NPLSVRTKVRVVKE T+LEACIENHTK+NLYMDQVEFEP+Q+WSA 
Sbjct: 181 ERKYLPQFFKFIVANPLSVRTKVRVVKETTYLEACIENHTKTNLYMDQVEFEPAQHWSAK 240

Query: 240 MLKADGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKL 299
           ++K D   S+ ++ +REIFKPPVLIRSGGGIHNYLYQL++ +HG++       SNVLGKL
Sbjct: 241 IIKDDEKQSEKDSLTREIFKPPVLIRSGGGIHNYLYQLRLSAHGAAQ------SNVLGKL 294

Query: 300 QITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQ 359
           QITWRTNLGEPGRLQTQQILGT IT KEIEL + +VP+V+ +DKPF + LKLTN TDKE 
Sbjct: 295 QITWRTNLGEPGRLQTQQILGTPITRKEIELCIAKVPAVINLDKPFSVHLKLTNHTDKEL 354

Query: 360 GPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGITVFD 419
           GPFE+WLSQ+ S EEK V INGL+ M L+ +EAFG+TDFHLNLIATKLGVQRITGITVFD
Sbjct: 355 GPFEVWLSQDGSVEEKAVTINGLQTMELSQLEAFGTTDFHLNLIATKLGVQRITGITVFD 414

Query: 420 KLEKITYDSLPDLEIFVDQD 439
           K EK TYD LPDLEIFV  D
Sbjct: 415 KSEKKTYDPLPDLEIFVAID 434

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225470348|ref|XP_002269604.1| PREDICTED: UPF0533 protein C5orf44 [Vitis vinifera] gi|296090651|emb|CBI41051.3| unnamed protein product [Vitis vinifera]

 Score =  699 bits (1804), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/437 (77%), Positives = 385/437 (88%), Gaps = 1/437 (0%)

Query: 1   MSSTPGTHSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVT 60
           MSS   +HSLAFRVMRLCRPS HV+ PLR+DP DL  GEDIFDDP+AAS+LP L+ +   
Sbjct: 1   MSSGQTSHSLAFRVMRLCRPSFHVDNPLRLDPADLLAGEDIFDDPLAASDLPRLLHNHTL 60

Query: 61  TNKSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDV 120
            +  SDLTYR+RFLL+D +D++GLSGLLVLPQ+FGAIYLGETFCSYISINNSS  EVRDV
Sbjct: 61  KSNDSDLTYRTRFLLNDPSDAMGLSGLLVLPQSFGAIYLGETFCSYISINNSSNFEVRDV 120

Query: 121 VIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGE 180
           VIKAEIQT+KQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVC+ALY+DG+GE
Sbjct: 121 VIKAEIQTEKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCSALYNDGDGE 180

Query: 181 RKYLPQFFKFIVSNPLSVRTKVRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATM 240
           RKYLPQFFKF+V+NPLSV+TKVR+VK+ TFLEACIENHTKSNLYMDQVEFEPSQ+W+AT+
Sbjct: 181 RKYLPQFFKFVVANPLSVKTKVRIVKDNTFLEACIENHTKSNLYMDQVEFEPSQHWTATV 240

Query: 241 LKADGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQ 300
           LKA    SD ++ +REIFK P+LIRSGGGI NYLYQLK+ S GS+  +KV GSNVLGKLQ
Sbjct: 241 LKAGEGLSDNDSPTREIFKQPILIRSGGGIQNYLYQLKLSSQGSAQ-MKVDGSNVLGKLQ 299

Query: 301 ITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQG 360
           ITWRTNLGEPGRLQTQQILG+ IT KEIEL V+EVPSV  +++PFL+ L LTNQTD+  G
Sbjct: 300 ITWRTNLGEPGRLQTQQILGSPITRKEIELQVMEVPSVTILERPFLVHLNLTNQTDRTMG 359

Query: 361 PFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGITVFDK 420
           PFE+WLSQ+DS EE+VVM+NGLR MAL  VEAF STDF LNLIATKLGVQ+ITGITVFD 
Sbjct: 360 PFEVWLSQSDSREEQVVMVNGLRAMALPQVEAFCSTDFRLNLIATKLGVQKITGITVFDI 419

Query: 421 LEKITYDSLPDLEIFVD 437
            EK TY+ LPDLEIFVD
Sbjct: 420 REKRTYEPLPDLEIFVD 436

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356548745|ref|XP_003542760.1| PREDICTED: UPF0533 protein C5orf44 homolog [Glycine max]

 Score =  677 bits (1746), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/433 (75%), Positives = 375/433 (86%), Gaps = 4/433 (0%)

Query: 7   THSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSD 66
           +HSLAFRVMRLCRPS +VEPPLR+DPTDLF+GED+FDDP A    P   SS    +  SD
Sbjct: 12  SHSLAFRVMRLCRPSFNVEPPLRLDPTDLFVGEDLFDDPAAK---PHSFSSAAAHDDDSD 68

Query: 67  LTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEI 126
             YR+RFLL   +D++GLSGLLVLPQ+FGAIYLGETFCSYISINNSS  EVR+V+IKAEI
Sbjct: 69  PNYRNRFLLRHFSDAMGLSGLLVLPQSFGAIYLGETFCSYISINNSSNFEVREVLIKAEI 128

Query: 127 QTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQ 186
           QT++QRILLLDTSKSPVE+IRAGGRYDFIVEHDVKELG HTLVCTALY+DG+GERKYLPQ
Sbjct: 129 QTERQRILLLDTSKSPVETIRAGGRYDFIVEHDVKELGPHTLVCTALYNDGDGERKYLPQ 188

Query: 187 FFKFIVSNPLSVRTKVRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKADGP 246
           FFKFIV+NPLSVRTKVRV+KE TFLEACIENHTKSNL+MDQV+FEP+Q +SAT+LK DG 
Sbjct: 189 FFKFIVANPLSVRTKVRVIKETTFLEACIENHTKSNLFMDQVDFEPAQYYSATILKGDGH 248

Query: 247 HSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITWRTN 306
           HS+ ++ +REIFKPP+LIRSGGGI+NYLYQLK LS GS    KV+GSNVLGKLQITWRTN
Sbjct: 249 HSEKDSPTREIFKPPILIRSGGGIYNYLYQLKTLSDGSPQ-TKVEGSNVLGKLQITWRTN 307

Query: 307 LGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWL 366
           LGEPGRLQTQQILGT  T KEIEL VVEVPS++ + KPF+LKL LTNQTD+E GPFE+ L
Sbjct: 308 LGEPGRLQTQQILGTPATKKEIELQVVEVPSIINLQKPFMLKLNLTNQTDRELGPFEVGL 367

Query: 367 SQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGITVFDKLEKITY 426
           SQN S  E+VVMINGL+ M L+ V+A GST+FHLNLIATK G+QRITGITVFD  E  +Y
Sbjct: 368 SQNVSYGERVVMINGLQSMVLSEVQALGSTNFHLNLIATKPGIQRITGITVFDTREMKSY 427

Query: 427 DSLPDLEIFVDQD 439
           + LPDLEIFVD D
Sbjct: 428 EPLPDLEIFVDMD 440

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449457717|ref|XP_004146594.1| PREDICTED: UPF0533 protein C5orf44-like [Cucumis sativus]

 Score =  670 bits (1728), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 317/438 (72%), Positives = 384/438 (87%), Gaps = 1/438 (0%)

Query: 1   MSSTPGTHSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVT 60
           MS+  G+HSLAFRVMRLCRPS  V+PPLR+DP DL +GEDI DDP+AA+ LP L++  ++
Sbjct: 1   MSNAQGSHSLAFRVMRLCRPSFQVDPPLRLDPVDLLVGEDILDDPVAANQLPRLLAPQLS 60

Query: 61  TNKSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDV 120
            +  SDL+Y SRFLLHDS+D++GL+GLLVLPQAFGAIYLGETFCSYIS+NNSS  EVRDV
Sbjct: 61  DDSDSDLSYSSRFLLHDSSDAMGLNGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV 120

Query: 121 VIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGE 180
           +IKAEIQT++QRILLLD+SKSPVE+IRAGGRYDFIVEHDVKELGAHTLVCTALY+DG+GE
Sbjct: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGAHTLVCTALYNDGDGE 180

Query: 181 RKYLPQFFKFIVSNPLSVRTKVRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATM 240
           RKYLPQFFKF+V+NPLSVRTKVRVVK+ TFLEACIENHTKSNL+MDQV+FEPS NW+A +
Sbjct: 181 RKYLPQFFKFMVANPLSVRTKVRVVKDSTFLEACIENHTKSNLFMDQVDFEPSPNWNAVI 240

Query: 241 LKADGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQ 300
           + AD  HS++ + +RE+FKPPVL+RSGGGIHN+LYQLK  ++G SSP+KV+GSN+LGKLQ
Sbjct: 241 INADEHHSEHKSTTREVFKPPVLVRSGGGIHNFLYQLKCSTNGPSSPLKVEGSNILGKLQ 300

Query: 301 ITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQG 360
           ITWRTN+GEPGRLQTQQILG+ IT KE+ELNVVE+P V+ +++PF L ++LT Q ++E G
Sbjct: 301 ITWRTNMGEPGRLQTQQILGSPITRKELELNVVEMPDVIRLERPFTLHMRLTTQIERELG 360

Query: 361 PFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGITVFDK 420
           PFE+W+S N SDE+KVVM+NGL+ + +  VE +GSTDFHLNLIATK GVQRI GI VFD 
Sbjct: 361 PFEVWMSLNSSDEDKVVMVNGLQKVVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVFDT 420

Query: 421 LEKITYDS-LPDLEIFVD 437
            EK  Y+   PDLEI+VD
Sbjct: 421 REKKAYEHPSPDLEIYVD 438

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224079249|ref|XP_002305809.1| predicted protein [Populus trichocarpa] gi|222848773|gb|EEE86320.1| predicted protein [Populus trichocarpa]

 Score =  657 bits (1695), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/438 (73%), Positives = 372/438 (84%), Gaps = 11/438 (2%)

Query: 1   MSSTPGTHSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVT 60
           MS+ P T SLAFRVMRLCRPS HV+ PL +DP+DL +GEDIFDDP+AA++LPPLI + +T
Sbjct: 1   MSTPPATQSLAFRVMRLCRPSFHVDTPLLLDPSDLILGEDIFDDPLAATHLPPLIDTHLT 60

Query: 61  TN-KSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRD 119
               SSDL+YRSRFLL + +DS GLSGLLVLPQ+FGAIYLGETFCSY+SINNSS  EVRD
Sbjct: 61  NPIDSSDLSYRSRFLLQNPSDSFGLSGLLVLPQSFGAIYLGETFCSYVSINNSSNFEVRD 120

Query: 120 VVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEG 179
           +VIKAE+QT++QRILLLDTSK+PVESIRA GRYDFIVEHDVKELGAHTLVCTALY+DG+G
Sbjct: 121 IVIKAEMQTERQRILLLDTSKTPVESIRASGRYDFIVEHDVKELGAHTLVCTALYTDGDG 180

Query: 180 ERKYLPQFFKFIVSNPLSVRTKV---RVVKEITFLEACIENHTKSNLYMDQVEFEPSQNW 236
           ERKYLPQFFKFIV+NPLSVRTKV    V +E T+LEACIENHTK+NLYMDQVEFEP+ NW
Sbjct: 181 ERKYLPQFFKFIVANPLSVRTKVLLLLVSQETTYLEACIENHTKTNLYMDQVEFEPAPNW 240

Query: 237 SATMLKADGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVL 296
           SA +LKAD   S  N+ SR     P L++SGGGI NYLYQL + SHGS+       SNVL
Sbjct: 241 SAKILKADEHKSKDNSPSR-CGNIPFLVKSGGGIRNYLYQLSLSSHGSAE------SNVL 293

Query: 297 GKLQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTD 356
           GKLQITWRTNLGEPGRLQTQQILGT IT KEIEL+V EVPS + +D+PFL+ L LTNQTD
Sbjct: 294 GKLQITWRTNLGEPGRLQTQQILGTPITPKEIELHVAEVPSAINLDRPFLVHLNLTNQTD 353

Query: 357 KEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGIT 416
           +E GPFE+WLSQ+D+ +EK VMINGL+ M L+ +EAFGSTDF+LNLIATKLGVQ+ITGIT
Sbjct: 354 RELGPFEVWLSQDDTLDEKTVMINGLQTMELSQLEAFGSTDFYLNLIATKLGVQKITGIT 413

Query: 417 VFDKLEKITYDSLPDLEI 434
           VFDK EK TY  LPDLE+
Sbjct: 414 VFDKSEKKTYAPLPDLEV 431

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356521339|ref|XP_003529314.1| PREDICTED: UPF0533 protein C5orf44-like [Glycine max]

 Score =  655 bits (1690), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/433 (74%), Positives = 369/433 (85%), Gaps = 8/433 (1%)

Query: 7   THSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSD 66
           +HSLAFRVMRLCRPS +VEPPLR+DP DLF GED+FDDP A    PP  SS   ++ +  
Sbjct: 11  SHSLAFRVMRLCRPSFNVEPPLRLDPADLFAGEDLFDDPAAN---PPSFSSSDDSDSN-- 65

Query: 67  LTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEI 126
             YR+RFLL   +D++GLSGLLVLPQ+FGAIYLGETFCSYISINNSS  EVRDV+IKAEI
Sbjct: 66  --YRNRFLLRHFSDAMGLSGLLVLPQSFGAIYLGETFCSYISINNSSNFEVRDVIIKAEI 123

Query: 127 QTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQ 186
           QT++ RILLLDTSKSPVE+IRAGGRYDFIVEHDVKELG HTLVCTALY+DG+GERKYLPQ
Sbjct: 124 QTERLRILLLDTSKSPVETIRAGGRYDFIVEHDVKELGPHTLVCTALYNDGDGERKYLPQ 183

Query: 187 FFKFIVSNPLSVRTKVRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKADGP 246
           FFKFIV+NPLSVRTKVRV+KE TFLEACIENHTKSNL+MDQV+FEP+Q +SA++LK DG 
Sbjct: 184 FFKFIVANPLSVRTKVRVIKETTFLEACIENHTKSNLFMDQVDFEPAQYYSASILKGDGH 243

Query: 247 HSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITWRTN 306
           HS+ ++ +RE FKPP+LIRSGGGI+NYLYQLK  S G     KV+GSNVLGKLQITWRTN
Sbjct: 244 HSEKDSPTRETFKPPILIRSGGGIYNYLYQLKTSSDGLPQ-TKVEGSNVLGKLQITWRTN 302

Query: 307 LGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWL 366
           LGEPGRLQTQQILGTT T KEIEL VVEVPS++ +  PF+LKL LTNQTD+E GPFE+ L
Sbjct: 303 LGEPGRLQTQQILGTTATKKEIELQVVEVPSIINLQNPFMLKLNLTNQTDRELGPFEVSL 362

Query: 367 SQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGITVFDKLEKITY 426
           SQN S  E+ VMINGL+ M L+ V+A GST+FHLNLIATK G+QRITGITVFD  E  +Y
Sbjct: 363 SQNVSYGERAVMINGLQSMVLSEVQALGSTNFHLNLIATKPGIQRITGITVFDTREMKSY 422

Query: 427 DSLPDLEIFVDQD 439
           + LPDLEIFVD D
Sbjct: 423 EPLPDLEIFVDMD 435

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388496064|gb|AFK36098.1| unknown [Medicago truncatula]

 Score =  645 bits (1663), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 314/432 (72%), Positives = 366/432 (84%), Gaps = 8/432 (1%)

Query: 8   HSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDL 67
           HS+AFRVMRLCRPS +V+PPLR+DP DLF+GED FDDP A S      SSD+     SD 
Sbjct: 14  HSVAFRVMRLCRPSFNVDPPLRIDPDDLFVGEDHFDDPSAPS------SSDLIA-PDSDP 66

Query: 68  TYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQ 127
            YR+RFLL   +DS+GLSGLLVLPQ+FGAIYLGETFCSYISINNSS  EVR+V+IKAEIQ
Sbjct: 67  NYRNRFLLQHFSDSMGLSGLLVLPQSFGAIYLGETFCSYISINNSSNFEVREVIIKAEIQ 126

Query: 128 TDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQF 187
           T++QRILLLDTSKSPVE+IRAGGRYDFIVEHDVKELG HTLVCTALY+DG+GERKYLPQF
Sbjct: 127 TERQRILLLDTSKSPVETIRAGGRYDFIVEHDVKELGPHTLVCTALYNDGDGERKYLPQF 186

Query: 188 FKFIVSNPLSVRTKVRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKADGPH 247
           FKFIV+NPLSVRTKVRV+KE TFLEACIENHTKSNL+MDQV+FEP+Q++SAT+L+ DGPH
Sbjct: 187 FKFIVANPLSVRTKVRVIKETTFLEACIENHTKSNLFMDQVDFEPAQHYSATILRGDGPH 246

Query: 248 SDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITWRTNL 307
           ++ +  +RE FKPP+LIRSGGGI+NYLYQLK  S   S+  KV+G+NVLGKLQITWRTNL
Sbjct: 247 TEKDNTARETFKPPILIRSGGGIYNYLYQLKS-SLDDSAQTKVEGNNVLGKLQITWRTNL 305

Query: 308 GEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLS 367
           GEPGRLQTQQILGT  T KEIEL VVEVPS++ + +PF LKL LTN T++E GPF++ +S
Sbjct: 306 GEPGRLQTQQILGTPTTKKEIELQVVEVPSIINLQRPFTLKLNLTNLTERELGPFKVSVS 365

Query: 368 QNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGITVFDKLEKITYD 427
           QN S  E  VMINGL+ M L+ +EA GST+ HLNLIATK G+Q+ITGITVFD     +Y+
Sbjct: 366 QNGSSGETAVMINGLQSMVLSQIEALGSTNIHLNLIATKPGIQKITGITVFDTRGMKSYE 425

Query: 428 SLPDLEIFVDQD 439
            LPDLEIFVD D
Sbjct: 426 PLPDLEIFVDID 437

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358346667|ref|XP_003637387.1| hypothetical protein MTR_084s0010 [Medicago truncatula] gi|355503322|gb|AES84525.1| hypothetical protein MTR_084s0010 [Medicago truncatula]

 Score =  637 bits (1642), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 314/441 (71%), Positives = 366/441 (82%), Gaps = 17/441 (3%)

Query: 8   HSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDL 67
           HS+AFRVMRLCRPS +V+PPLR+DP DLF+GED FDDP A S      SSD+     SD 
Sbjct: 14  HSVAFRVMRLCRPSFNVDPPLRIDPDDLFVGEDHFDDPSAPS------SSDLIA-PDSDP 66

Query: 68  TYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQ 127
            YR+RFLL   +DS+GLSGLLVLPQ+FGAIYLGETFCSYISINNSS  EVR+V+IKAEIQ
Sbjct: 67  NYRNRFLLQHFSDSMGLSGLLVLPQSFGAIYLGETFCSYISINNSSNFEVREVIIKAEIQ 126

Query: 128 TDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQF 187
           T++QRILLLDTSKSPVE+IRAGGRYDFIVEHDVKELG HTLVCTALY+DG+GERKYLPQF
Sbjct: 127 TERQRILLLDTSKSPVETIRAGGRYDFIVEHDVKELGPHTLVCTALYNDGDGERKYLPQF 186

Query: 188 FKFIVSNPLSVRTKVRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKADGPH 247
           FKFIV+NPLSVRTKVRV+KE TFLEACIENHTKSNL+MDQV+FEP+Q++SAT+L+ DGPH
Sbjct: 187 FKFIVANPLSVRTKVRVIKETTFLEACIENHTKSNLFMDQVDFEPAQHYSATILRGDGPH 246

Query: 248 SDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITWRTNL 307
           ++ +  +RE FKPP+LIRSGGGI+NYLYQLK  S   S+  KV+G+NVLGKLQITWRTNL
Sbjct: 247 TEKDNTARETFKPPILIRSGGGIYNYLYQLKS-SLDDSAQTKVEGNNVLGKLQITWRTNL 305

Query: 308 GEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLS 367
           GEPGRLQTQQILGT  T KEIEL VVEVPS++ + +PF LKL LTN T++E GPF++ +S
Sbjct: 306 GEPGRLQTQQILGTPTTKKEIELQVVEVPSIINLQRPFTLKLNLTNLTERELGPFKVSVS 365

Query: 368 QNDSDEEKVVMINGLRIM---------ALAPVEAFGSTDFHLNLIATKLGVQRITGITVF 418
           QN S  E  VMINGL+ M          L+ +EA GST+ HLNLIATK G+Q+ITGITVF
Sbjct: 366 QNGSSGETAVMINGLQSMVMHSLWIISVLSQIEALGSTNIHLNLIATKPGIQKITGITVF 425

Query: 419 DKLEKITYDSLPDLEIFVDQD 439
           D     +Y+ LPDLEIFVD D
Sbjct: 426 DTRGMKSYEPLPDLEIFVDID 446

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18407493|ref|NP_566117.1| uncharacterized protein [Arabidopsis thaliana] gi|16226796|gb|AAL16264.1|AF428334_1 At2g47960/T9J23.10 [Arabidopsis thaliana] gi|18377797|gb|AAL67048.1| unknown protein [Arabidopsis thaliana] gi|20197311|gb|AAC63650.2| expressed protein [Arabidopsis thaliana] gi|20197565|gb|AAM15133.1| expressed protein [Arabidopsis thaliana] gi|21281259|gb|AAM45021.1| unknown protein [Arabidopsis thaliana] gi|330255823|gb|AEC10917.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  605 bits (1560), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 299/440 (67%), Positives = 353/440 (80%), Gaps = 5/440 (1%)

Query: 2   SSTPGTHSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTT 61
           + T G HSLAFRVMRLC+PS HV+PPLR+DP DL  GED  DDP +AS     +SS    
Sbjct: 6   TQTHGPHSLAFRVMRLCKPSFHVDPPLRIDPFDLLAGEDFSDDPSSASLFRRHVSSADAV 65

Query: 62  NKSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVV 121
           +  SDL+YR+RFLL+   D IGLSGLL+LPQ+FGAIYLGETFCSYIS+NNSST EVRDV 
Sbjct: 66  D--SDLSYRNRFLLNHPTDPIGLSGLLLLPQSFGAIYLGETFCSYISVNNSSTSEVRDVT 123

Query: 122 IKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGER 181
           IKAEIQT++QRILLLDTSKSPVESIR GGRYDFIVEHDVKELGAHTLVC+ALY+D +GER
Sbjct: 124 IKAEIQTERQRILLLDTSKSPVESIRTGGRYDFIVEHDVKELGAHTLVCSALYNDADGER 183

Query: 182 KYLPQFFKFIVSNPLSVRTKVRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATML 241
           KYLPQFFKF+V+NPLSVRTKVRVVKE TFLEACIENHTK+NL+MDQV+FEP++ WSA  L
Sbjct: 184 KYLPQFFKFVVANPLSVRTKVRVVKETTFLEACIENHTKANLFMDQVDFEPAKQWSAVRL 243

Query: 242 KADGPHSD--YNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKL 299
           + +    D   +  S  I KPPV+IRSGGGIHNYLY+L   S   S   K QGSN+LGK 
Sbjct: 244 QNEDSTEDPPTSGLSGLIPKPPVIIRSGGGIHNYLYKLNP-SADVSGQTKFQGSNILGKF 302

Query: 300 QITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQ 359
           QITWRTNLGEPGRLQTQQILG  ++ KEI + VVEVP+V+ +++PF   L LTNQTD++ 
Sbjct: 303 QITWRTNLGEPGRLQTQQILGAPVSRKEINMRVVEVPAVIHLNRPFRAYLNLTNQTDRQL 362

Query: 360 GPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGITVFD 419
           GPFE+ LSQ+++  EK V INGL+ + L  +EAFGS DF LNLIA+KLGVQ+I GIT  D
Sbjct: 363 GPFEVSLSQDETQLEKPVGINGLQTLMLPRIEAFGSNDFQLNLIASKLGVQKIAGITALD 422

Query: 420 KLEKITYDSLPDLEIFVDQD 439
             EK TY+ +PD+EIFV+ D
Sbjct: 423 TREKKTYELVPDMEIFVETD 442

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297824907|ref|XP_002880336.1| hypothetical protein ARALYDRAFT_483987 [Arabidopsis lyrata subsp. lyrata] gi|297326175|gb|EFH56595.1| hypothetical protein ARALYDRAFT_483987 [Arabidopsis lyrata subsp. lyrata]

 Score =  602 bits (1551), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 297/438 (67%), Positives = 352/438 (80%), Gaps = 5/438 (1%)

Query: 1   MSSTPGTHSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVT 60
           MS+T G HSLAFRVMRLC+PS HV+PPLR+DP DL  GED  DDP +AS     +SS   
Sbjct: 1   MSATHGPHSLAFRVMRLCKPSFHVDPPLRIDPFDLLAGEDFSDDPSSASLFRRHVSSADA 60

Query: 61  TNKSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDV 120
            +  SDL+YR+RFLL+   D IGLSGLL+LPQ+FGAIYLGETFCSYIS+NNSST EVRDV
Sbjct: 61  VD--SDLSYRNRFLLNHPTDPIGLSGLLLLPQSFGAIYLGETFCSYISVNNSSTSEVRDV 118

Query: 121 VIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGE 180
            IKAEIQT++QRILLLDTSKSPVESIR GGRYDFIVEHDVKELGAHTLVC+ALY+D +GE
Sbjct: 119 TIKAEIQTERQRILLLDTSKSPVESIRTGGRYDFIVEHDVKELGAHTLVCSALYNDADGE 178

Query: 181 RKYLPQFFKFIVSNPLSVRTKVRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATM 240
           RKYLPQFFKF+V+NPLSVRTKVRVVKE TFLEACIENHTK+NL+MDQV+FEP++ WSA  
Sbjct: 179 RKYLPQFFKFVVANPLSVRTKVRVVKETTFLEACIENHTKANLFMDQVDFEPAKQWSAVR 238

Query: 241 LKADGPHSD--YNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGK 298
           L+ +    D   +  S  I KPPV+IRSGGGIHNYLY+L   S   S   K QGSN+LGK
Sbjct: 239 LQNEDSTEDPPTSGLSGLIPKPPVIIRSGGGIHNYLYKLNP-SADVSGQTKFQGSNILGK 297

Query: 299 LQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKE 358
            QITWRTNLGEPGRLQTQQILG  ++ KEI + V EVP+V+ +++PF   L LTNQTD++
Sbjct: 298 FQITWRTNLGEPGRLQTQQILGAPVSRKEINMRVAEVPAVIHLNRPFPAYLNLTNQTDRQ 357

Query: 359 QGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGITVF 418
            GPFE+ LSQ++S  EK V INGL+ + L  +EAFGS DF LNLIA+KLGVQ+I+GIT  
Sbjct: 358 LGPFEVSLSQDESQMEKPVGINGLQTLMLPRIEAFGSNDFQLNLIASKLGVQKISGITAL 417

Query: 419 DKLEKITYDSLPDLEIFV 436
           D  EK TY+ +P++E+ V
Sbjct: 418 DTREKKTYELVPEMEVSV 435

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	439
TAIR|locus:2043433	442	AT2G47960 "AT2G47960" [Arabido	0.990	0.984	0.661	5.4e-150
ZFIN|ZDB-GENE-030131-9775	412	trappc13 "trafficking protein	0.765	0.815	0.338	1.1e-52
MGI|MGI:1914225	417	Trappc13 "trafficking protein	0.767	0.808	0.325	1.4e-48
DICTYBASE|DDB_G0269062	511	DDB_G0269062 "DUF974 family pr	0.535	0.459	0.348	1.2e-47
FB|FBgn0032204	438	CG4953 [Drosophila melanogaste	0.788	0.789	0.316	1.4e-44
UNIPROTKB|G4NC96	339	MGG_01105 "Uncharacterized pro	0.216	0.280	0.324	0.0005

TAIR|locus:2043433 AT2G47960 "AT2G47960" [Arabidopsis thaliana (taxid:3702)]

 Score = 1464 (520.4 bits), Expect = 5.4e-150, P = 5.4e-150
 Identities = 291/440 (66%), Positives = 343/440 (77%)

Query:     2 SSTPGTHSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTT 61
             + T G HSLAFRVMRLC+PS HV+PPLR+DP DL  GED  DDP +AS     +SS    
Sbjct:     6 TQTHGPHSLAFRVMRLCKPSFHVDPPLRIDPFDLLAGEDFSDDPSSASLFRRHVSSADAV 65

Query:    62 NKSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVV 121
             +  SDL+YR+RFLL+   D IGLSGLL+LPQ+FGAIYLGETFCSYIS+NNSST EVRDV 
Sbjct:    66 D--SDLSYRNRFLLNHPTDPIGLSGLLLLPQSFGAIYLGETFCSYISVNNSSTSEVRDVT 123

Query:   122 IKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGER 181
             IKAEIQT++QRILLLDTSKSPVESIR GGRYDFIVEHDVKELGAHTLVC+ALY+D +GER
Sbjct:   124 IKAEIQTERQRILLLDTSKSPVESIRTGGRYDFIVEHDVKELGAHTLVCSALYNDADGER 183

Query:   182 KYLPQFFKFIVSNPLSVRTKVRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATML 241
             KYLPQFFKF+V+NPLSVRTKVRVVKE TFLEACIENHTK+NL+MDQV+FEP++ WSA  L
Sbjct:   184 KYLPQFFKFVVANPLSVRTKVRVVKETTFLEACIENHTKANLFMDQVDFEPAKQWSAVRL 243

Query:   242 KADGPHSD--YNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKL 299
             + +    D   +  S  I KPPV+IRSGGGIHNYLY+L   S   S   K QGSN+LGK 
Sbjct:   244 QNEDSTEDPPTSGLSGLIPKPPVIIRSGGGIHNYLYKLNP-SADVSGQTKFQGSNILGKF 302

Query:   300 QITWRTNLGEPGRXXXXXXXXXXXXSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQ 359
             QITWRTNLGEPGR             KEI + VVEVP+V+ +++PF   L LTNQTD++ 
Sbjct:   303 QITWRTNLGEPGRLQTQQILGAPVSRKEINMRVVEVPAVIHLNRPFRAYLNLTNQTDRQL 362

Query:   360 GPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGITVFD 419
             GPFE+ LSQ+++  EK V INGL+ + L  +EAFGS DF LNLIA+KLGVQ+I GIT  D
Sbjct:   363 GPFEVSLSQDETQLEKPVGINGLQTLMLPRIEAFGSNDFQLNLIASKLGVQKIAGITALD 422

Query:   420 KLEKITYDSLPDLEIFVDQD 439
               EK TY+ +PD+EIFV+ D
Sbjct:   423 TREKKTYELVPDMEIFVETD 442

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0006635 "fatty acid beta-oxidation" evidence=RCA

GO:0016558 "protein import into peroxisome matrix" evidence=RCA

ZFIN|ZDB-GENE-030131-9775 trappc13 "trafficking protein particle complex 13" [Danio rerio (taxid:7955)]

 Score = 491 (177.9 bits), Expect = 1.1e-52, Sum P(2) = 1.1e-52
 Identities = 119/352 (33%), Positives = 190/352 (53%)

Query:    79 ADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDT 138
             A+++ L  +L LPQ FG I+LGETF SYIS++N S+  V+D+++KA++QT  QR L L  
Sbjct:    56 AETLILGEMLTLPQNFGNIFLGETFSSYISVHNDSSQVVKDILVKADLQTSSQR-LNLSA 114

Query:   139 SKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPLSV 198
             S S V  ++     D ++ H+VKE+G H LVC   Y+   GE+ Y  +FFKF V  PL V
Sbjct:   115 SNSAVSELKPECCIDDVIHHEVKEIGTHILVCAVSYTTQTGEKLYFRKFFKFQVLKPLDV 174

Query:   199 RTKV-RVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLK--ADGPHSDYNAQSR 255
             +TK      +  FLEA I+N T S ++M++V  EPS  ++ T L   A G  S  +   +
Sbjct:   175 KTKFYNAETDEVFLEAQIQNITTSPMFMEKVSLEPSMMYNVTELNNVASGDESSESTFGK 234

Query:   256 EIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITWRTNLGEPGRXXX 315
               +  P+  R       YLY LK     +     ++G  V+GKL I W+TNLGE GR   
Sbjct:   235 MSYLQPLDTRQ------YLYCLKPKPEFAEKAGVIKGVTVIGKLDIVWKTNLGERGRLQT 288

Query:   316 XXXXXXXXXSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEK 375
                        ++ L++  +P  V +++PF +  K+TN +++     ++ L   ++    
Sbjct:   289 SQLQRMAPGYGDVRLSLEFIPDTVDLEEPFDITCKITNCSERTM---DLLLEMCNTRSVH 345

Query:   376 VVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGITVFDKLEKITYD 427
                ++G ++  L+P     S    L L+++  G+Q I+G+ + D   K TY+
Sbjct:   346 WCGVSGRQLGKLSPS---ASLSIPLKLLSSVQGLQSISGLRLTDTFLKRTYE 394

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

MGI|MGI:1914225 Trappc13 "trafficking protein particle complex 13" [Mus musculus (taxid:10090)]

 Score = 457 (165.9 bits), Expect = 1.4e-48, Sum P(2) = 1.4e-48
 Identities = 117/360 (32%), Positives = 189/360 (52%)

Query:    77 DSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLL 136
             + A+ + L  +L LPQ FG I+LGETF SYIS++N S   V+D+++KA++QT  QR L L
Sbjct:    54 NGAEILMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDILVKADLQTSSQR-LNL 112

Query:   137 DTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPL 196
               S + V  ++     D ++ H+VKE+G H LVC   Y+   GE+ Y  +FFKF V  PL
Sbjct:   113 SASNAAVAELKPDCCIDDVIHHEVKEIGTHILVCAVSYTTQGGEKMYFRKFFKFQVLKPL 172

Query:   197 SVRTK-------VRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKADGPHSD 249
              V+TK       +  V +  FLEA I+N T S ++M++V  EPS  ++ T L +     +
Sbjct:   173 DVKTKFYNAESDLSSVTDEVFLEAQIQNITTSPMFMEKVSLEPSIMYNVTELNSVTQAGE 232

Query:   250 YNAQ--SREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITWRTNL 307
               +   SR   +P            YLY LK     +     ++G  V+GKL I W+TNL
Sbjct:   233 CISTFGSRGYLQPM-------DTRQYLYCLKPKKEFAEKAGIIKGVTVIGKLDIVWKTNL 285

Query:   308 GEPGRXXXXXXXXXXXXSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLS 367
             GE GR              ++ L++  +P  V +++PF +  K+TN +++     ++ L 
Sbjct:   286 GERGRLQTSQLQRMAPGYGDVRLSLEAIPDTVNLEEPFHITCKITNCSERMM---DLVLE 342

Query:   368 QNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGITVFDKLEKITYD 427
               +++      I+G ++  L P     S    L L+++  G+Q ++G+ + D   K TY+
Sbjct:   343 MCNTNSIHWCGISGRQLGKLHPSS---SLCLALTLLSSVQGLQSVSGLRLTDTFLKRTYE 399

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

DICTYBASE|DDB_G0269062 DDB_G0269062 "DUF974 family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 376 (137.4 bits), Expect = 1.2e-47, Sum P(2) = 1.2e-47
 Identities = 86/247 (34%), Positives = 141/247 (57%)

Query:     8 HSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDL 67
             H L  +VMRL +P++    P+  +  DL    +     I +++L       V ++ S+D 
Sbjct:     5 HLLNLKVMRLSKPNIPTINPILCEKQDL--PYETMSTSIDSTSLS---MGSVNSSGSND- 58

Query:    68 TYRSRFLLHDSADSIGLSGLLV---LPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKA 124
                +  L+ ++ + I + GL V   L    G IYLGE FC YIS+NN S  +VR+V +K 
Sbjct:    59 ---NNQLIGNNGNPINMEGLGVTSMLQLQSGVIYLGEMFCCYISLNNHSPYQVRNVFLKV 115

Query:   125 EIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYL 184
             E+QT   RI LLD+ +  V +   G   DF+V+ +VKE G + LVC   Y+  EGE+K  
Sbjct:   116 ELQTTSSRIPLLDSEQQSVPTFNPGFSSDFVVQREVKESGVNILVCAVNYTTPEGEQKKF 175

Query:   185 PQFFKFIVSNPLSVRTKVRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKAD 244
              ++FKF V NPL ++T++  +  + FLEAC+EN T+ +L+++ + FEP +++++  +  +
Sbjct:   176 RKYFKFQVLNPLVLKTRIHNLPNVVFLEACLENATQGSLFIESILFEPIEHFNSKDISFE 235

Query:   245 GPHSDYN 251
                 D N
Sbjct:   236 NSLDDNN 242

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

FB|FBgn0032204 CG4953 [Drosophila melanogaster (taxid:7227)]

 Score = 417 (151.9 bits), Expect = 1.4e-44, Sum P(2) = 1.4e-44
 Identities = 116/367 (31%), Positives = 197/367 (53%)

Query:    79 ADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLL-- 136
             A+++    +L+LPQ+FG+IYLGETF SYI ++N++   V  V +KA++Q++  RI L   
Sbjct:    55 AETLAAGQVLLLPQSFGSIYLGETFASYICVHNTTPNPVECVTVKADLQSNTSRINLSMH 114

Query:   137 DTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPL 196
             + +KSPV  +  GG  D ++ ++VKE+G H LVC   YS   G  + L +FFKF V  PL
Sbjct:   115 ENAKSPVV-LPPGGTIDDVIRYEVKEIGTHILVCEVNYSTPAGYAQSLRKFFKFQVLKPL 173

Query:   197 SVRTKV--RVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKADGPHSDYNAQS 254
              V+TK     + EI +LEA I+N T S   +++VE + S+++S T L    P    N +S
Sbjct:   174 DVKTKFYNAEIDEI-YLEAQIQNVTTSPFCLEKVELDGSEDYSVTPLNTL-P----NGES 227

Query:   255 REIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITWRTNLGEPGRXX 314
               +F    +++       +LY +K     + +   ++  N +GKL I WR+NLGE GR  
Sbjct:   228 --VFTVKHMLQPNNSCQ-FLYCIKPKGDIAKNVDTLRQFNNVGKLDIVWRSNLGEKGRLQ 284

Query:   315 XXXXXXXXXXSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEE 374
                        K + L V++  + + I   F    ++TN T +      + L+   S + 
Sbjct:   285 TSQLQRLPFECKTLRLEVLDAKNTIKIGTIFTFNCRVTN-TSEHPMKLNVRLAAKFSPDS 343

Query:   375 KVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGITVFDKL--EKITYDSLPDL 432
             +     G     L  +++  S +F L++  +KLG+ +IT + + + L  E+ T +++ D+
Sbjct:   344 QYT---GCADFMLNLLQSGESAEFPLSVCPSKLGLVKITPLVLTNTLQNEQFTIENVVDV 400

Query:   433 EIFVDQD 439
              + V+ D
Sbjct:   401 FV-VNSD 406

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|G4NC96 MGG_01105 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 101 (40.6 bits), Expect = 0.00050, Sum P(2) = 0.00050
 Identities = 36/111 (32%), Positives = 52/111 (46%)

Query:    80 DSIGLSGLLVLPQAFGAIYLGETFCSYISINN-----SSTLEVRDVVIKAEIQTDKQR-- 132
             D   LS +L LP +FG+ Y+GETF   +  N+     ++  +VRDV I+AE++T      
Sbjct:    65 DPFILSPILNLPPSFGSAYVGETFSCTLCANHDVPDGAAARQVRDVRIEAEMKTPGSAAG 124

Query:   133 -ILLLDTSKSPVES--------IRAGGRYDFIVEHDVKELGAHTLVCTALY 174
              +  LD   +            +R G     IV  D+KE G H L  T  Y
Sbjct:   125 VVTKLDLGPNGGGGGEGDGGVDLREGETLQRIVRFDLKEEGNHVLAVTVSY 175

GO:0005575 "cellular_component" evidence=ND

GO:0043581 "mycelium development" evidence=IEP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q0VFT9	CE044_XENTR	No assigned EC number	0.3231	0.8678	0.9247	yes	no
Q95TN1	U533_DROME	No assigned EC number	0.3057	0.8838	0.8858	yes	no
Q5RCG0	CE044_PONAB	No assigned EC number	0.3210	0.8587	0.9040	yes	no
Q3TIR1	CE044_MOUSE	No assigned EC number	0.3193	0.8678	0.9136	yes	no
Q5M887	CE044_RAT	No assigned EC number	0.3193	0.8701	0.9138	yes	no
A7MB76	CE044_BOVIN	No assigned EC number	0.3140	0.8587	0.9040	yes	no
Q6PBY7	CE044_DANRE	No assigned EC number	0.3302	0.8610	0.9174	yes	no
A5PLN9	CE044_HUMAN	No assigned EC number	0.3187	0.8587	0.9040	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.IV.3206.1 hypothetical protein (423 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	439
pfam06159	235	pfam06159, DUF974, Protein of unknown function (DU	1e-101

>gnl|CDD|218917 pfam06159, DUF974, Protein of unknown function (DUF974)

 Score =  302 bits (775), Expect = e-101
 Identities = 115/236 (48%), Positives = 151/236 (63%), Gaps = 7/236 (2%)

Query: 88  LVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIR 147
           L LPQ+FG+IYLGETF SY+ +NN S+ EVRDV IKAE+QT  QR+ L D+  +PVE++R
Sbjct: 1   LTLPQSFGSIYLGETFSSYLCVNNESSKEVRDVSIKAELQTPSQRLNLSDSVDAPVETLR 60

Query: 148 AGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPLSVRTKVRVVKE 207
            G   DF+V  DVKE G H LVCT  Y++  GE +Y  +FFKFIV NPLSVRTK   +++
Sbjct: 61  PGESLDFVVSFDVKEEGTHILVCTVSYTEASGETRYFRKFFKFIVKNPLSVRTKFYQLED 120

Query: 208 I----TFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKADGPHSDYNAQSREIFKPPVL 263
           +     +LEA IEN T+ NL++++V  EPS  + AT L  +    D +     + K PVL
Sbjct: 121 LSRRRVYLEAQIENITEDNLFLEKVTLEPSPGYKATSLNWEPSLGDVDGLDGGMDKRPVL 180

Query: 264 IRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITWRTNLGEPGRLQTQQIL 319
               G I  YL+ LK    G+   +K+ G   LGKL I WRT +GE GRLQT Q+ 
Sbjct: 181 --KPGDIRQYLFCLKP-KEGALEELKLDGRTNLGKLDIVWRTAMGEKGRLQTSQLQ 233

Family of uncharacterized eukaryotic proteins. Length = 235

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	439
KOG2625	348	consensus Uncharacterized conserved protein [Funct	100.0
PF06159	249	DUF974: Protein of unknown function (DUF974); Inte	100.0
PF07919	554	Gryzun: Gryzun, putative trafficking through Golgi	99.9
KOG4386	809	consensus Uncharacterized conserved protein [Funct	99.76
PF12735	306	Trs65: TRAPP trafficking subunit Trs65; InterPro:	99.07
PF08626	1185	TRAPPC9-Trs120: Transport protein Trs120 or TRAPPC	98.23
PF12742	57	Gryzun-like: Gryzun, putative Golgi trafficking	97.74
PF12584	147	TRAPPC10: Trafficking protein particle complex sub	97.56
PF07705	101	CARDB: CARDB; InterPro: IPR011635 The APHP (acidic	96.69
PF00927	107	Transglut_C: Transglutaminase family, C-terminal i	96.48
PF07919	554	Gryzun: Gryzun, putative trafficking through Golgi	95.58
PF10633	78	NPCBM_assoc: NPCBM-associated, NEW3 domain of alph	95.24
PF14874	102	PapD-like: Flagellar-associated PapD-like	94.86
PF07705	101	CARDB: CARDB; InterPro: IPR011635 The APHP (acidic	93.38
PF05753	181	TRAP_beta: Translocon-associated protein beta (TRA	92.46
PF10633	78	NPCBM_assoc: NPCBM-associated, NEW3 domain of alph	91.24
PF05753	181	TRAP_beta: Translocon-associated protein beta (TRA	89.34
PF11797	140	DUF3324: Protein of unknown function C-terminal (D	87.44
smart00809	104	Alpha_adaptinC2 Adaptin C-terminal domain. Adaptin	86.25
PF14874	102	PapD-like: Flagellar-associated PapD-like	84.86
PF02883	115	Alpha_adaptinC2: Adaptin C-terminal domain; InterP	84.25
PF00207	92	A2M: Alpha-2-macroglobulin family; InterPro: IPR00	82.84
PF00927	107	Transglut_C: Transglutaminase family, C-terminal i	81.43

>KOG2625 consensus Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=1.4e-98  Score=692.83  Aligned_cols=341  Identities=31%  Similarity=0.542  Sum_probs=318.1

Q ss_pred             cccccccccceeecceEEEEEEEEcCCCcceEEEEEEEEEeCCCeeEeccCCCCCCccccCCCCeeeEEEEEEccccCce
Q 013597           87 LLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAH  166 (439)
Q Consensus        87 ~L~LP~sfG~iylGEtFs~~i~v~N~s~~~v~~V~ikaelqT~s~r~~L~~~~~~~~~~L~pg~~ld~iv~~~lke~G~h  166 (439)
                      +|.+||.||+|||||||++||+|||+|++.|++|.+|+||||.+||+.|... .....+++|.++.+.+|+||+||+|+|
T Consensus         1 ~l~~pq~f~niflgetfs~yinv~nds~k~v~~i~lk~dlqtssqrl~l~~s-~~~~aei~~~~c~~~vi~hevkeig~h   79 (348)
T KOG2625|consen    1 MLIAPQMFENIFLGETFSFYINVHNDSEKTVKDILLKADLQTSSQRLNLPAS-NAAAAEIEPDCCEDDVIHHEVKEIGQH   79 (348)
T ss_pred             CccchhhhcceeeccceEEEEEEecchhhhhhhheeeecccccceeeccccc-hhhhhhcCccccchhhhhHHHHhhccE
Confidence            4789999999999999999999999999999999999999999999999653 345778999999999999999999999


Q ss_pred             EEEEEEEEEcCCCceeeeceEEEEEeecCeEEEEEEEEe-------CCceEEEEEEEecccccEEEEeEEeeecCCceee
Q 013597          167 TLVCTALYSDGEGERKYLPQFFKFIVSNPLSVRTKVRVV-------KEITFLEACIENHTKSNLYMDQVEFEPSQNWSAT  239 (439)
Q Consensus       167 ~L~c~VsY~~~~Ge~~~frK~fkF~v~~Pl~VktK~~~~-------~~~~~LEaqiqN~s~~~l~le~v~Lep~~~~~~~  239 (439)
                      +|+|+|+|++++||.++|||||||+|.+|+|||||||++       .+++||||||||+|..+|+||+|+|+|+.+|.++
T Consensus        80 ilicavny~tq~ge~myfrkffkf~v~kpidvktkfynaesdlssv~~dvfleaqien~s~a~mflekv~ldps~~ynvt  159 (348)
T KOG2625|consen   80 ILICAVNYKTQAGEKMYFRKFFKFPVLKPIDVKTKFYNAESDLSSVNDDVFLEAQIENMSNANMFLEKVELDPSIHYNVT  159 (348)
T ss_pred             EEEEEEeeeccCccchhHHhhccccccccccccceeecccccccccchhhhhhhhhhcccccchhhhhhccCchheecce
Confidence            999999999999999999999999999999999999976       5889999999999999999999999999999999


Q ss_pred             eecCCCCCCCCCCccccccCCceEEeCCCCeeeEEEEEeecCCCCCCCccccCceeeEEEEEEEEcCCCCCceeeEEEEe
Q 013597          240 MLKADGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITWRTNLGEPGRLQTQQIL  319 (439)
Q Consensus       240 ~ln~~~~~~~~~~~~~~~~~~~~l~~~~gd~~q~lf~l~~~~~~~~~~~~~~g~~~lGkL~I~WRs~~Ge~G~LqTs~l~  319 (439)
                      +++.+.+.++..++    |... .+++|.|+|||||||+|+.+..++....++.+.+|||||.||++|||+|||||++||
T Consensus       160 ~i~~~~e~gdcvst----fg~~-~~lkp~d~rq~l~cl~pk~d~~~~~gi~k~lt~igkldi~wktnlgekgrlqts~lq  234 (348)
T KOG2625|consen  160 EIAHEDEAGDCVST----FGSG-ALLKPKDIRQFLFCLKPKADFAEKAGIIKDLTSIGKLDISWKTNLGEKGRLQTSALQ  234 (348)
T ss_pred             eecchhhccccccc----cccc-cccCccchhhheeecCchHHHHHhhccccccceeeeeEEEeeccccccccchHHHHH
Confidence            99987777665443    3332 247789999999999999887655555788999999999999999999999999999


Q ss_pred             eecCccCCeEEEEEecCceeEeCCcEEEEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEecccceeecccCCCCeeEEE
Q 013597          320 GTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFH  399 (439)
Q Consensus       320 ~~~p~~~dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~  399 (439)
                      |++|+++|++|+++.+|+.|.+++||.++|+|+|||+|.|| |++.+++..   ..-++|||+++++||+|.|.+...|.
T Consensus       235 riapgygdvrlsle~~p~~vdleepf~iscki~ncserald-l~l~l~~~n---nrhi~~c~~sg~qlgkl~ps~~l~~a  310 (348)
T KOG2625|consen  235 RIAPGYGDVRLSLEAIPACVDLEEPFEISCKITNCSERALD-LQLELCNPN---NRHIHFCGISGRQLGKLHPSQHLCFA  310 (348)
T ss_pred             hhcCCCCceEEEeeccccccccCCCeEEEEEEcccchhhhh-hhhhhcCCC---CceeEEeccccccccCCCCcceeeeE
Confidence            99999999999999999999999999999999999999999 999998864   45799999999999999999999999


Q ss_pred             EEEEecccceEEeCceEEEecCCCeEeccCCCeeeEee
Q 013597          400 LNLIATKLGVQRITGITVFDKLEKITYDSLPDLEIFVD  437 (439)
Q Consensus       400 L~l~pl~~Glq~isgI~l~D~~~~r~y~~~~~~~vfV~  437 (439)
                      |+++|...|+|+|+||+|+|+++||+|||||++||||.
T Consensus       311 l~l~~~~~giqsisgiritdtf~kr~ye~ddiaqi~v~  348 (348)
T KOG2625|consen  311 LNLFPSTQGIQSISGIRITDTFLKRIYEHDDIAQICVS  348 (348)
T ss_pred             EeeccchhcceeecceEeehhhhhhhhcccchHHhhcC
Confidence            99999999999999999999999999999999999984

>PF06159 DUF974: Protein of unknown function (DUF974); InterPro: IPR010378 This is a family of uncharacterised eukaryotic proteins

Probab=100.00  E-value=1.8e-70  Score=531.81  Aligned_cols=234  Identities=44%  Similarity=0.706  Sum_probs=207.7

Q ss_pred             ccccccccceeecceEEEEEEEEcCCCcceEEEEEEEEEeCCCe--eEeccCCCCC--CccccCCCCeeeEEEEEEcccc
Q 013597           88 LVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQ--RILLLDTSKS--PVESIRAGGRYDFIVEHDVKEL  163 (439)
Q Consensus        88 L~LP~sfG~iylGEtFs~~i~v~N~s~~~v~~V~ikaelqT~s~--r~~L~~~~~~--~~~~L~pg~~ld~iv~~~lke~  163 (439)
                      |+||+|||+|||||||+||||+||+++++|++|.|||||||+++  |+.|.++...  ++.+|+||+++|+||+|+|||+
T Consensus         1 L~LP~sfG~iylGEtF~~~l~~~N~s~~~v~~v~ikvemqT~s~~~r~~L~~~~~~~~~~~~L~p~~~l~~iv~~~lkE~   80 (249)
T PF06159_consen    1 LTLPQSFGSIYLGETFSCYLSVNNDSNKPVRNVRIKVEMQTPSQSLRLPLSDNENSDSPVASLAPGESLDFIVSHELKEL   80 (249)
T ss_pred             CCCCcccCCEeecCCEEEEEEeecCCCCceEEeEEEEEEeCCCCCccccCCCCccccccccccCCCCeEeEEEEEEeeec
Confidence            78999999999999999999999999999999999999999999  9999876544  5788999999999999999999


Q ss_pred             CceEEEEEEEEEcC---CCceeeeceEEEEEeecCeEEEEEEEEeCC--------ceEEEEEEEecccccEEEEeEEeee
Q 013597          164 GAHTLVCTALYSDG---EGERKYLPQFFKFIVSNPLSVRTKVRVVKE--------ITFLEACIENHTKSNLYMDQVEFEP  232 (439)
Q Consensus       164 G~h~L~c~VsY~~~---~Ge~~~frK~fkF~v~~Pl~VktK~~~~~~--------~~~LEaqiqN~s~~~l~le~v~Lep  232 (439)
                      |+|+|+|+|+|+++   +||+|+|||+|||+|.+||+||||++++.+        ++||||||||+|+.||+||+|+|+|
T Consensus        81 G~h~L~c~VsY~~~~~~~g~~~tfRK~ykF~v~~PL~VktK~~~~~~~~~~~~~~~~~LEaqlqN~s~~pl~Le~v~lep  160 (249)
T PF06159_consen   81 GNHTLVCTVSYTDPTETSGERRTFRKFYKFQVLNPLSVKTKVYNLEDDSSLSPRERVFLEAQLQNISSGPLFLEKVKLEP  160 (249)
T ss_pred             CceEEEEEEEEecCcccCCccceEeeeeEEeCCCCcEEEEEEEecCCccccccceeEEEEEEEEecCCCceEEEEEEeec
Confidence            99999999999999   999999999999999999999999999976        9999999999999999999999999


Q ss_pred             cCCceeeeecCCCCCCCCCCccccccCCceEEeCCCCeeeEEEEEeecCCCCCCCccccCceeeEEEEEEEEcCCCCCce
Q 013597          233 SQNWSATMLKADGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITWRTNLGEPGR  312 (439)
Q Consensus       233 ~~~~~~~~ln~~~~~~~~~~~~~~~~~~~~l~~~~gd~~q~lf~l~~~~~~~~~~~~~~g~~~lGkL~I~WRs~~Ge~G~  312 (439)
                      .++|++.++||+....+.......+......+++|+|+|||||+|+++..........+++.+||||+|.||++|||+||
T Consensus       161 ~~~~~~~~ln~~~~~~~~~~~~~~~~~~~~~~L~P~d~~qylF~l~~~~~~~~~~~~~~~~~~lGkL~I~WRs~~Ge~Gr  240 (249)
T PF06159_consen  161 SPGFKVTDLNWEPSGESSDGEFGGISSGSRPYLQPGDVRQYLFCLTPKPEGAQNDSGADGRTNLGKLDIVWRSNMGERGR  240 (249)
T ss_pred             CCCceeEecccccccccccccccccccCCcceeCCCCEEEEEEEEEECCccccccccccCcceeeEEEEEEECCCCCCce
Confidence            99999999998664433221111111122346889999999999999987443455678899999999999999999999


Q ss_pred             eeEEEEeee
Q 013597          313 LQTQQILGT  321 (439)
Q Consensus       313 LqTs~l~~~  321 (439)
                      |||++|+|.
T Consensus       241 LqT~~L~rr  249 (249)
T PF06159_consen  241 LQTSQLQRR  249 (249)
T ss_pred             eehhhcccC
Confidence            999999873

>PF07919 Gryzun: Gryzun, putative trafficking through Golgi; InterPro: IPR012880 The proteins featured in this family are all hypothetical eukaryotic proteins of unknown function

Probab=99.90  E-value=5.1e-21  Score=205.36  Aligned_cols=313  Identities=17%  Similarity=0.227  Sum_probs=226.6

Q ss_pred             ccccccccceeecceEEEEEEEEcCCCcceEEEEEEEEEeC---------CCeeEe------ccC----CCCCCccccCC
Q 013597           88 LVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQT---------DKQRIL------LLD----TSKSPVESIRA  148 (439)
Q Consensus        88 L~LP~sfG~iylGEtFs~~i~v~N~s~~~v~~V~ikaelqT---------~s~r~~------L~~----~~~~~~~~L~p  148 (439)
                      +.+|..-+-+|+||.+..-|.|.|.++.....+. .+.+..         ......      ..+    ....+++.|++
T Consensus       177 I~~~~~~~~~l~gE~~~i~i~I~n~e~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~l~~  255 (554)
T PF07919_consen  177 IKLPNHKPPALTGEFYPIPITISNNEDEEASGVL-EVRLLHPSQLGVSSEETEDLSQVNWDSDKDDEPLFLGIPLGELAP  255 (554)
T ss_pred             EEeCCCCCCeEcCCEEEEEEEEEcCCCccceeEE-EEEEecccccccccccCccceecccccccccchhccCcccccCCC
Confidence            4456788899999999999999999877655543 333330         011110      000    01235778999


Q ss_pred             CCeeeEEEEEEccccCceEEEEEEEEEc--CC--CceeeeceEEEEEeecCe----EEEEEEE-----------------
Q 013597          149 GGRYDFIVEHDVKELGAHTLVCTALYSD--GE--GERKYLPQFFKFIVSNPL----SVRTKVR-----------------  203 (439)
Q Consensus       149 g~~ld~iv~~~lke~G~h~L~c~VsY~~--~~--Ge~~~frK~fkF~v~~Pl----~VktK~~-----------------  203 (439)
                      |++....++......|.+.|.++++|..  .+  +-.-+-.+.+++.+.+||    ++.++++                 
T Consensus       256 ~~s~~~~l~i~~~~~~~~~L~i~~~Y~l~~~~~~~~~i~~~~~~~l~~~~PF~~~y~~~~~~~~~~~~~p~~f~~~~~~~  335 (554)
T PF07919_consen  256 GSSITVTLYIRTSRPGEYELSISVSYHLDVESDPETPISKTKTVQLPVINPFEANYDFSPRFHPDPWDMPSPFDVDGSSD  335 (554)
T ss_pred             CCcEEEEEEEEeCCceeEEEEEEEEEEEecCCCCceeEEEeEEEeeeEEcCEEeeeeEEeeeccCCccCCcccccccccc
Confidence            9999999999999999999999999975  32  223344667999999999    6666664                 


Q ss_pred             -----------------EeCCceEEEEEEEecccccEEEEeEEeeecCCceeeeecCCCCCCCCCCccccccCCceEEeC
Q 013597          204 -----------------VVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKADGPHSDYNAQSREIFKPPVLIRS  266 (439)
Q Consensus       204 -----------------~~~~~~~LEaqiqN~s~~~l~le~v~Lep~~~~~~~~ln~~~~~~~~~~~~~~~~~~~~l~~~  266 (439)
                                       ..+.+++|.++++|.++++|.|+++.|+.................. .       ......++
T Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~s~a~~~L~I~~~~l~~~~~~~~~~~~~~~~~~~-~-------~~~~~~l~  407 (554)
T PF07919_consen  336 FQTLNPEPLTRDGILSVGLNQPWCLNSDIESFAPEPLEIEDISLEVLSSNGGASCDVSSEDSS-S-------PESGTVLQ  407 (554)
T ss_pred             cccccccccccccccccccCCCeEEEccceecCCCceEEEEEEEEEecCCCceeeeecccccc-C-------CCccceeC
Confidence                             1235689999999999999999999999766544332211110000 0       00112345


Q ss_pred             CCCeeeEEEEEe--ecCCCCCCCccccCceeeEEEEEEEEc-CCCCCceeeEEEEeeecCccCCeEEEE-EecCceeEeC
Q 013597          267 GGGIHNYLYQLK--MLSHGSSSPVKVQGSNVLGKLQITWRT-NLGEPGRLQTQQILGTTITSKEIELNV-VEVPSVVGID  342 (439)
Q Consensus       267 ~gd~~q~lf~l~--~~~~~~~~~~~~~g~~~lGkL~I~WRs-~~Ge~G~LqTs~l~~~~p~~~dl~l~v-~~~P~~v~l~  342 (439)
                      +++.+...|++.  .....   .........+|.+.|.||| ..+..+...++.+..+.....+.++.| .++|+...++
T Consensus       408 ~~~~~~~~f~~~~~~~~~~---~~~~~~~~~~g~~~I~WrR~~~~s~~~~~~t~l~lP~~~v~~~~~~v~~~~p~~~~~~  484 (554)
T PF07919_consen  408 PGECREDQFCLRLDVQKLS---LDDRRNVTLLGSLVIKWRRNSSNSSDPVVTTPLPLPRVNVPSSPLRVLASVPPSAIVG  484 (554)
T ss_pred             ccccccccccccccccccc---cccCccceeEEEEEEEEEECCCCCCCceEEEEeecCceEccCCCcEEEEecCCccccC
Confidence            678887777743  21111   1123446889999999999 556657777777654433344444454 3789999999


Q ss_pred             CcEEEEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEecccceeecccCCCCeeEEEEEEEecccceEEeCceEEEe
Q 013597          343 KPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGITVFD  419 (439)
Q Consensus       343 ~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l~pl~~Glq~isgI~l~D  419 (439)
                      .||+++|+|.|+|.+.+. +.+.|+.++     +|+++|.+...+ .|.|++..++.++|+|+.+|++.+|.++|.|
T Consensus       485 ~~~~l~~~I~N~T~~~~~-~~~~me~s~-----~F~fsG~k~~~~-~llP~s~~~~~y~l~pl~~G~~~lP~l~v~d  554 (554)
T PF07919_consen  485 EPFTLSYTIENPTNHFQT-FELSMEPSD-----DFMFSGPKQTTF-SLLPFSRHTVRYNLLPLVAGWWILPRLKVRD  554 (554)
T ss_pred             cEEEEEEEEECCCCccEE-EEEEEccCC-----CEEEECCCcCce-EECCCCcEEEEEEEEEccCCcEECCcEEEeC
Confidence            999999999999999998 999998765     699999999999 5999999999999999999999999999987

The region in question is approximately 150 residues long.

>KOG4386 consensus Uncharacterized conserved protein [Function unknown]

Probab=99.76  E-value=4.4e-20  Score=188.37  Aligned_cols=310  Identities=16%  Similarity=0.153  Sum_probs=225.4

Q ss_pred             ecceEEEEEEEEcCCCcceEEEEEEEEEeCCC-----eeE--eccCC-----------CCCCccccCCCCeeeEEEEEEc
Q 013597           99 LGETFCSYISINNSSTLEVRDVVIKAEIQTDK-----QRI--LLLDT-----------SKSPVESIRAGGRYDFIVEHDV  160 (439)
Q Consensus        99 lGEtFs~~i~v~N~s~~~v~~V~ikaelqT~s-----~r~--~L~~~-----------~~~~~~~L~pg~~ld~iv~~~l  160 (439)
                      --|.++.++.|.-+.+..++++..||++..+.     +|-  .++.-           ...+.+.+-+|+...+....++
T Consensus       446 ~~E~~~~~lki~~~kts~~~e~~~kv~~~~Ge~tsLT~rn~~k~~~~~~~~d~~~~~~k~~~a~~v~~~EQ~~Kmlyvrc  525 (809)
T KOG4386|consen  446 HVENIIGFLKIGVAKTSVKLESVEKVDCLIGEVTSLTIRNTCKSSPIHGLLDFKRKEQKHAEAAAVLFVEQELKMLYVRC  525 (809)
T ss_pred             chheEEEEEEeeechhhhhhhhhhhcCcccccccceeeecccccCCchhhhhhhhHhhccCchhhcchHHHHHHHHHHhh
Confidence            35788889999999999999999999988773     121  11110           1245677888888888888888


Q ss_pred             cccCceEEEEEEEEEcCCC-cee----eece--EEEEEeecCeEEEEEEE-----EeCC-----ceEEEEEEEecccccE
Q 013597          161 KELGAHTLVCTALYSDGEG-ERK----YLPQ--FFKFIVSNPLSVRTKVR-----VVKE-----ITFLEACIENHTKSNL  223 (439)
Q Consensus       161 ke~G~h~L~c~VsY~~~~G-e~~----~frK--~fkF~v~~Pl~VktK~~-----~~~~-----~~~LEaqiqN~s~~~l  223 (439)
                      -..|.....+.|+|-.++. |.+    .+.|  .-..+..-||+|+-||.     .+.+     .+.|+..+-..++|.+
T Consensus       526 gtvgsrmflvyvsyLinttVeekeivckchkdeTvtietvfpfdvavkFvstkfehlervyadIpfllmtdLlsaspwAl  605 (809)
T KOG4386|consen  526 GTVGSRMFLVYVSYLINTTVEEKEIVCKCHKDETVTIETVFPFDVAVKFVSTKFEHLERVYADIPFLLMTDLLSASPWAL  605 (809)
T ss_pred             hhhccchhhHHHHHHhhhHHHHhhHhhhccccceEEEEEEeeeeeeeeeehhhhhhccChhhhhhHHHHHHHhhhchHHH
Confidence            8889888888899987541 101    1222  23334444555555554     4432     2444555556688888


Q ss_pred             EEEeEEeeecCCceeeeecCCCCCCCCCCccccccCCceEEeCCCCeeeEEEEEeecCCCCCCCccccCceeeEEEEEEE
Q 013597          224 YMDQVEFEPSQNWSATMLKADGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITW  303 (439)
Q Consensus       224 ~le~v~Lep~~~~~~~~ln~~~~~~~~~~~~~~~~~~~~l~~~~gd~~q~lf~l~~~~~~~~~~~~~~g~~~lGkL~I~W  303 (439)
                      .|-..+++-.+.++-++ +.       ++      +...+++|.|++...+||+.+..-     ...+|.++.|++.|+|
T Consensus       606 tIVsSelqlapsmttvd-ql-------eS------qvdnvilqtgEsasecfclqcpsl-----gniEggvatGhyiisW  666 (809)
T KOG4386|consen  606 TIVSSELQLAPSMTTVD-QL-------ES------QVDNVILQTGESASECFCLQCPSL-----GNIEGGVATGHYIISW  666 (809)
T ss_pred             HHHHHHHhhhhhheeee-cc-------cc------cccchhhhcccceeeeeeEecccc-----ccccCCCccceEEEEE
Confidence            88877777666555432 11       11      334556788999999999999754     3468899999999999


Q ss_pred             EcCCC--CCceeeEEEEeeecCccCCeEEEEE-ecCceeEeCCcEEEEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEe
Q 013597          304 RTNLG--EPGRLQTQQILGTTITSKEIELNVV-EVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMIN  380 (439)
Q Consensus       304 Rs~~G--e~G~LqTs~l~~~~p~~~dl~l~v~-~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~  380 (439)
                      |+...  ..-. -|+-+...-.....++|+|. ++|+..++++|..+.+.+.|+|+..++ ++++++++|     +||++
T Consensus       667 kRtsameNipi-ittVitLphviVe~iPlhvnadlpsfgrVReslpvkyhLqnktdlvqd-veisvepsD-----aFMFS  739 (809)
T KOG4386|consen  667 KRTSAMENIPI-ITTVITLPHVIVEAIPLHVNADLPSFGRVRESLPVKYHLQNKTDLVQD-VEISVEPSD-----AFMFS  739 (809)
T ss_pred             eecccccCCCc-eeeecccccceeeeccceeecCCCCcceecccccEEEEeccccceeee-EEeecccch-----hheec
Confidence            98533  4433 33433333334677788886 899999999999999999999999998 999999876     89999


Q ss_pred             cccceeecccCCCCeeEEEEEEEecccceEEeCceEEEecC-------CCeEeccCCCeeeEeec
Q 013597          381 GLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGITVFDKL-------EKITYDSLPDLEIFVDQ  438 (439)
Q Consensus       381 G~s~~~Lg~L~P~~s~~~~L~l~pl~~Glq~isgI~l~D~~-------~~r~y~~~~~~~vfV~~  438 (439)
                      |.+.++| ++.||.+.++.++++|+.+|+|++|.|.|.-.+       +-|++   -++.|||++
T Consensus       740 Glkqirl-riLPGteqemlynfypLmAGyqqlPslninllrfpnfTnQllrRf---iPtsIFVkP  800 (809)
T KOG4386|consen  740 GLKQIRL-RILPGTEQEMLYNFYPLMAGYQQLPSLNINLLRFPNFTNQLLRRF---IPTSIFVKP  800 (809)
T ss_pred             ccceEEE-EEcCCCceEEEEEEehhhchhhhCCcccccCccCCchHHHHHHhh---cCceEEEcc
Confidence            9999999 899999999999999999999999998886322       22334   688999975

>PF12735 Trs65: TRAPP trafficking subunit Trs65; InterPro: IPR024662 This family is one of the subunits of the TRAPP Golgi trafficking complex []

Probab=99.07  E-value=1.9e-08  Score=101.03  Aligned_cols=107  Identities=20%  Similarity=0.277  Sum_probs=90.0

Q ss_pred             CeEEEEEecCceeEeCCcEEEEEEEEeCCCCCcccEEEEEEeCC------------------------------------
Q 013597          327 EIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQND------------------------------------  370 (439)
Q Consensus       327 dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~------------------------------------  370 (439)
                      .+.++.. -|..|+++++|..++.|.|+|+..++ |.|.+.+..                                    
T Consensus       157 gv~~sF~-gp~~V~~Ge~F~w~v~ivN~S~~~r~-L~l~~~~~r~~~~~~~~~~~~~~~~s~~~~~~~~~~~v~~en~~~  234 (306)
T PF12735_consen  157 GVTFSFS-GPSSVKVGEPFSWKVFIVNRSSSPRK-LALYVPPRRRRNDERSNSPPPNPSSSSNLNNKQIADAVTDENIVQ  234 (306)
T ss_pred             CeEEEEe-CCceEecCCeEEEEEEEEECCCCCee-EEEEecCccccccccccCCCCCcccccccccccccccceehhHHH
Confidence            3334432 36889999999999999999999998 999888711                                    


Q ss_pred             ------CCC-cceEEEecccceeecccCCCCeeEEEEEEEecccceEEeCceEEEecCCCeEeccCCCeeeEe
Q 013597          371 ------SDE-EKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGITVFDKLEKITYDSLPDLEIFV  436 (439)
Q Consensus       371 ------~~~-~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l~pl~~Glq~isgI~l~D~~~~r~y~~~~~~~vfV  436 (439)
                            ... ..++++-.. .+++|.|.||++..+.|.|+|+.+|++.|.||+|+|..++..+|+.+..+|||
T Consensus       235 ~~~~~~~~~~~~gli~Lsn-DiriGpL~P~~c~~~eL~fi~l~~G~~~L~~lkvvDl~t~e~~di~~l~~IvV  306 (306)
T PF12735_consen  235 AMQKYSSVEESTGLICLSN-DIRIGPLAPGACYSVELRFIALSPGVHNLEGLKVVDLNTNEHVDIGDLPDIVV  306 (306)
T ss_pred             HhhhhcccccCCceEEecc-cccccccCCCceEEEEEEEEEeccceEeecceEEEECCCCceEEeCCCceEEC
Confidence                  000 235655555 68999999999999999999999999999999999999999999999999997

TRAPP subunits are found in two different sized complexes, TRAPP I and TRAPP II. While both complexes contain the same seven subunits, Bet3p, Bet5p, Trs20p, Trs23p, Trs31p, Trs33p and Trs85p, with TRAPPC human equivalents, TRAPP II has the additional three subunits ,Trs65p, Trs120p and Trs130p []. While it has been implicated in cell wall biogenesis and stress response, the role of Trs65 in TRAPP II is supported by the findings that the protein co-localises with Trs130p, and deletion of TRS65 in yeast leads to a conditional lethal phenotype if either one of the other TRAPP II-specific subunits is modified []. Furthermore, the trs65 mutant has reduced Ypt31/32p guanine nucleotide exchange, GEF, activity []. Trs65 is also known as killer toxin-resistance protein 11.

>PF08626 TRAPPC9-Trs120: Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit; InterPro: IPR013935 The trafficking protein particle complex TRAPP is a multi-protein complex needed in the early stages of the secretory pathway

Probab=98.23  E-value=0.00023  Score=83.76  Aligned_cols=300  Identities=19%  Similarity=0.247  Sum_probs=174.1

Q ss_pred             ccccccceeecceEEEEEEEEcCCCcceEEEEEEEEEeCC-------CeeE-e---ccCCC-----CC-----CccccCC
Q 013597           90 LPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTD-------KQRI-L---LLDTS-----KS-----PVESIRA  148 (439)
Q Consensus        90 LP~sfG~iylGEtFs~~i~v~N~s~~~v~~V~ikaelqT~-------s~r~-~---L~~~~-----~~-----~~~~L~p  148 (439)
                      ++++-=.+|=||+..+.|.+.|.|+.+|..+.++..=.|.       ..+- .   +++.+     ..     .-..|+|
T Consensus       788 l~~~~~mlleGE~~~~~ItL~N~S~~pvd~l~~sf~DS~~~~~~~~l~~k~l~~~e~yelE~~l~~~~~~~i~~~~~I~P  867 (1185)
T PF08626_consen  788 LTQGALMLLEGEKQTFTITLRNTSSVPVDFLSFSFQDSTIEPLQKALSNKDLSPDELYELEWQLFKLPAFRILNKPPIPP  867 (1185)
T ss_pred             CCCcceEEECCcEEEEEEEEEECCccccceEEEEEEeccHHHHhhhhhcccCChhhhhhhhhhhhcCcceeecccCccCC
Confidence            4555556799999999999999999999999888741111       0000 0   00000     00     0017899


Q ss_pred             CCeeeEEEEEEcccc--CceEEEEEEEEEc--CCCceeeece---EEEEEeecCeEEE-EEEEEe---------------
Q 013597          149 GGRYDFIVEHDVKEL--GAHTLVCTALYSD--GEGERKYLPQ---FFKFIVSNPLSVR-TKVRVV---------------  205 (439)
Q Consensus       149 g~~ld~iv~~~lke~--G~h~L~c~VsY~~--~~Ge~~~frK---~fkF~v~~Pl~Vk-tK~~~~---------------  205 (439)
                      |++..+-++...+..  ..+-....+.|..  .+++..+.|+   -+...|.+-++|. -.+..+               
T Consensus       868 g~~~~~~~~~~~~~~~~~~~~~~i~l~y~~~~~~~~~~y~Rql~ipl~vtV~~slev~~~dilp~~~~~~~~~~~~~~~~  947 (1185)
T PF08626_consen  868 GESATFTVEVDGKPGPIQLTYADIQLEYGYSGEDSSTFYTRQLSIPLTVTVNPSLEVTRCDILPLNSDSVSSNSDSWISY  947 (1185)
T ss_pred             CCEEEEEEEecCcccccceeeeeEEEEecccCCCCCCCeeEEEEEEEEEEEeceEEEeeeeEEecccccccccCcchhhh
Confidence            999999888776653  2444555567763  2344555566   3555555665543 333333               


Q ss_pred             ------------CCceEEEEEEEecccccEEEEeEEeeecCCceeee--ecCCCCCCCCCC---ccccc------cC-Cc
Q 013597          206 ------------KEITFLEACIENHTKSNLYMDQVEFEPSQNWSATM--LKADGPHSDYNA---QSREI------FK-PP  261 (439)
Q Consensus       206 ------------~~~~~LEaqiqN~s~~~l~le~v~Lep~~~~~~~~--ln~~~~~~~~~~---~~~~~------~~-~~  261 (439)
                                  .+-.+|...|.|....+|.++ +.+  ...+...+  +..    +....   |...+      +. .|
T Consensus       948 ~~~~~~~~~~~~~~~clL~lDlrNsw~~~~~v~-l~~--~~~~~~~~~~I~p----g~t~Ri~vPi~Ri~l~~~~~~~~p 1020 (1185)
T PF08626_consen  948 ITSLKSDVNDDSSDYCLLLLDLRNSWPNPLSVN-LHY--DEDFSSSEITIEP----GHTSRIIVPIKRIYLEDPDFSFKP 1020 (1185)
T ss_pred             hhhhcccccCCCCCeEEEEEEEEecCCCceEEE-EEe--ccCccccceEECC----CCeEEEEEEecccccCCcccccCc
Confidence                        134788999999999988731 122  22222211  111    10000   00000      00 11


Q ss_pred             eEEeCCCCeeeEEEEEeecCCCCCCCccccC-----ceeeEEEEEEEEcCCCCCceeeEEEEe----eec--CccCCeEE
Q 013597          262 VLIRSGGGIHNYLYQLKMLSHGSSSPVKVQG-----SNVLGKLQITWRTNLGEPGRLQTQQIL----GTT--ITSKEIEL  330 (439)
Q Consensus       262 ~l~~~~gd~~q~lf~l~~~~~~~~~~~~~~g-----~~~lGkL~I~WRs~~Ge~G~LqTs~l~----~~~--p~~~dl~l  330 (439)
                        +.+....|||+=.   +.... .....+.     ...+-+|...|+...+..|.+.--.+.    ++.  .-.+++.+
T Consensus      1021 --ip~l~~~rqfv~s---k~s~e-ee~~~re~FW~RE~ll~~l~~~W~~~~~~~G~i~lR~~irLt~~mv~~L~~~~i~i 1094 (1185)
T PF08626_consen 1021 --IPSLSRNRQFVVS---KLSEE-EERAMRELFWYREELLSRLKGTWKESSNSSGEIDLRGIIRLTPRMVDILRLDPIQI 1094 (1185)
T ss_pred             --CCCcccCceeEEC---CCCHH-HHHHHHHHHHHHHHHHhhcceEEEcCCCCcEEEEcccccccCHHHHHhhccCccce
Confidence              1112244565422   11110 0000111     145889999999876668888766652    121  22556655


Q ss_pred             EEE---ecCc---------eeEeCCcEEEEEEEEeCCCCCcccEEEEEEeCC------CCCcceEEEecccceeecccCC
Q 013597          331 NVV---EVPS---------VVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQND------SDEEKVVMINGLRIMALAPVEA  392 (439)
Q Consensus       331 ~v~---~~P~---------~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~------~~~~~~~~~~G~s~~~Lg~L~P  392 (439)
                      .+.   +-+.         .+.+++.++++++|+|++++++. +.+....+.      .+...-++|+|.....++.|+|
T Consensus      1095 ~~~l~~~~~~~~~~~~~~~~v~~~~f~~l~v~i~N~s~~~i~-l~~~~~~~~~~~~~~~~~~~ril~~G~Lq~~l~~l~p 1173 (1185)
T PF08626_consen 1095 DFSLSDDSDSVKVGESSKFSVQVDEFYTLRVTITNRSSRPIS-LRLQPSLDHQNGNVALDLDRRILWNGSLQQPLPELEP 1173 (1185)
T ss_pred             EEEEcccccccccCcceeEEEecCCcEEEEEEeecCCCCcee-eEeeeeccCCCcccccCcCCeEEEEccCcccccccCC
Confidence            543   1222         36799999999999999999876 433332221      1235579999999999999999


Q ss_pred             CCeeEEEEEEE
Q 013597          393 FGSTDFHLNLI  403 (439)
Q Consensus       393 ~~s~~~~L~l~  403 (439)
                      +++.++.+.++
T Consensus      1174 ~~~~~~~~~li 1184 (1185)
T PF08626_consen 1174 GESTEHELSLI 1184 (1185)
T ss_pred             CceEEEEEEEE
Confidence            99999999876

To date, two kinds of TRAPP complexes have been studied, TRAPPI and TRAPP II. These complexes differ in subunit composition []. TRAPP I binds vesicles derived from the endoplasmic reticulum bringing them closer to the acceptor membrane. Trs120 is a subunit specific to the TRAPP II complex [] along with Trs65p and Trs130p(TRAPPC10). It is suggested that Trs120p is required for the stability of the Trs130p subunit, suggesting that these two proteins might interact in some way []. It is likely that there is a complex function for TRAPP II in multiple pathways [].

>PF12742 Gryzun-like: Gryzun, putative Golgi trafficking

Probab=97.74  E-value=8.2e-05  Score=55.48  Aligned_cols=50  Identities=18%  Similarity=0.265  Sum_probs=44.8

Q ss_pred             EEEEEEeCCCCCcceEEEecccceeecccCCCCeeEEEEEEEecccceEEeCceEE
Q 013597          362 FEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGITV  417 (439)
Q Consensus       362 l~l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l~pl~~Glq~isgI~l  417 (439)
                      +.|.+++++     .|+++|.+.+++ .+.||+..++.++++|+..|++.+|.|.|
T Consensus         8 lli~V~~n~-----~F~v~G~~~~~~-~~~~~~~~~i~~~Fipl~aG~~~LP~I~I   57 (57)
T PF12742_consen    8 LLIEVDKND-----NFIVCGPKKMNF-HMWPGQKFEIPYNFIPLTAGFLKLPKINI   57 (57)
T ss_pred             eEEEEcCCC-----ceEEEccceeEE-EEccCceEEEEEEEEEeehheecCccccC
Confidence            557777654     899999999998 89999999999999999999999999864

>PF12584 TRAPPC10: Trafficking protein particle complex subunit 10, TRAPPC10; InterPro: IPR022233 The trafficking protein particle complex TRAPP is a multi-protein complex needed in the early stages of the secretory pathway

Probab=97.56  E-value=0.0023  Score=57.50  Aligned_cols=80  Identities=14%  Similarity=0.260  Sum_probs=62.9

Q ss_pred             CceeEeCCcEEEEEEEEeC-----------CCCCcccEEEEEEeCCCCCcceEEEecccceeecccCCCCeeEEEEEEEe
Q 013597          336 PSVVGIDKPFLLKLKLTNQ-----------TDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIA  404 (439)
Q Consensus       336 P~~v~l~~pF~v~~~v~N~-----------s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l~p  404 (439)
                      +...++++|..++++|+|.           .+.... +...+..+    ...++++|.+...+ .+..++..+|.+.|+|
T Consensus        24 ~~~~~vGqpi~~~l~I~~~~~W~~~~~~~~~~~~~~-~~yei~a~----~~~WlV~Grrrg~f-~~~~~~~~~~~l~LIP   97 (147)
T PF12584_consen   24 PPPCRVGQPIPAELRIKNSRKWSSEDQEESSNEDTE-FMYEIVAD----SDNWLVSGRRRGVF-SLSDGSEHEIPLTLIP   97 (147)
T ss_pred             CcceEeCCeEEEEEEEEEcccCCccccccccCCCcc-EEEEEecC----CCcEEEeccCcceE-EecCCCeEEEEEEEEe
Confidence            4567999999999999995           122223 44445332    24799999998777 5589999999999999


Q ss_pred             cccceEEeCceEEEecC
Q 013597          405 TKLGVQRITGITVFDKL  421 (439)
Q Consensus       405 l~~Glq~isgI~l~D~~  421 (439)
                      |..|+-.+|.|+|....
T Consensus        98 L~~G~L~lP~V~i~~~~  114 (147)
T PF12584_consen   98 LRAGYLPLPKVEIRPYD  114 (147)
T ss_pred             cccceecCCEEEEEecc
Confidence            99999999999998544

To date, two kinds of TRAPP complexes have been studied, TRAPPI and TRAPP II. These complexes differ in subunit composition []. TRAPP I binds vesicles derived from the endoplasmic reticulum bringing them closer to the acceptor membrane. This entry represents a domain which forms part of the TRAPP complex for mediating vesicle docking and fusion in the Golgi apparatus. The fungal version is referred to as Trs130, and an alternative vertebrate alias is TMEM1 [, ].

>PF07705 CARDB: CARDB; InterPro: IPR011635 The APHP (acidic peptide-dependent hydrolases/peptidase) domain is found in a variety of different proteins

Probab=96.69  E-value=0.021  Score=46.60  Aligned_cols=79  Identities=11%  Similarity=0.185  Sum_probs=56.0

Q ss_pred             CCeEEEEEecCceeEeCCcEEEEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEecccceeecccCCCCeeEEEEEEEec
Q 013597          326 KEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIAT  405 (439)
Q Consensus       326 ~dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l~pl  405 (439)
                      .||.+.+...|..+..++++++++.|+|.-.....++.+.+..++     ...    ....++.|.||++..+.+++-+-
T Consensus         2 pDL~v~~~~~~~~~~~g~~~~i~~~V~N~G~~~~~~~~v~~~~~~-----~~~----~~~~i~~L~~g~~~~v~~~~~~~   72 (101)
T PF07705_consen    2 PDLTVSITVSPSNVVPGEPVTITVTVKNNGTADAENVTVRLYLDG-----NSV----STVTIPSLAPGESETVTFTWTPP   72 (101)
T ss_dssp             --EEE-EEEC-SEEETTSEEEEEEEEEE-SSS-BEEEEEEEEETT-----EEE----EEEEESEB-TTEEEEEEEEEE-S
T ss_pred             CCEEEEEeeCCCcccCCCEEEEEEEEEECCCCCCCCEEEEEEECC-----cee----ccEEECCcCCCcEEEEEEEEEeC
Confidence            467776678899999999999999999995555555778776553     122    34567899999999999999999


Q ss_pred             ccceEEeC
Q 013597          406 KLGVQRIT  413 (439)
Q Consensus       406 ~~Glq~is  413 (439)
                      .+|.+.|.
T Consensus        73 ~~G~~~i~   80 (101)
T PF07705_consen   73 SPGSYTIR   80 (101)
T ss_dssp             S-CEEEEE
T ss_pred             CCCeEEEE
Confidence            99988853

; PDB: 2KUT_A 2L0D_A 3IDU_A 2KL6_A.

>PF00927 Transglut_C: Transglutaminase family, C-terminal ig like domain; InterPro: IPR008958 Synonym(s): Protein-glutamine gamma-glutamyltransferase, Fibrinoligase, TGase Transglutaminases catalyse the post-translational modification of proteins at glutamine residues, with formation of isopeptide bonds

Probab=96.48  E-value=0.0054  Score=51.79  Aligned_cols=72  Identities=13%  Similarity=0.197  Sum_probs=54.5

Q ss_pred             ecCceeEeCCcEEEEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEeccc------ceeecccCCCCeeEEEEEEEeccc
Q 013597          334 EVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLR------IMALAPVEAFGSTDFHLNLIATKL  407 (439)
Q Consensus       334 ~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s------~~~Lg~L~P~~s~~~~L~l~pl~~  407 (439)
                      ++++.+.++++|.+.++++|.++..+..+.+.+.-.      .+.++|..      ......|.|+++..+.+.+.|...
T Consensus         6 ~~~~~~~vG~d~~v~v~~~N~~~~~l~~v~~~l~~~------~v~ytG~~~~~~~~~~~~~~l~p~~~~~~~~~i~p~~y   79 (107)
T PF00927_consen    6 KLPGDPVVGQDFTVSVSFTNPSSEPLRNVSLNLCAF------TVEYTGLTRDQFKKEKFEVTLKPGETKSVEVTITPSQY   79 (107)
T ss_dssp             EEESEEBTTSEEEEEEEEEE-SSS-EECEEEEEEEE------EEECTTTEEEEEEEEEEEEEE-TTEEEEEEEEE-HHSH
T ss_pred             EECCCccCCCCEEEEEEEEeCCcCccccceeEEEEE------EEEECCcccccEeEEEcceeeCCCCEEEEEEEEEceeE
Confidence            567788899999999999999888844477777543      57777774      335678999999999999999999


Q ss_pred             ceEE
Q 013597          408 GVQR  411 (439)
Q Consensus       408 Glq~  411 (439)
                      |-.+
T Consensus        80 G~~~   83 (107)
T PF00927_consen   80 GPKQ   83 (107)
T ss_dssp             EEEC
T ss_pred             ecch
Confidence            9843

Members of the transglutaminase family usually have three domains: N-terminal (IPR001102 from INTERPRO), middle (IPR013808 from INTERPRO) and C-terminal. The middle domain is usually well conserved, but family members can display major differences in their N- and C-terminal domains, although their overall structure is conserved []. This entry represents the C-terminal domain found in transglutaminases, which consists of an immunoglobulin-like beta-sandwich consisting of seven strands in two sheets with a Greek key topology. The best known transglutaminase is blood coagulation factor XIII, a plasma tetrameric protein composed of two catalytic A subunits and two non-catalytic B subunits. Factor XIII is responsible for cross-linking fibrin chains, thus stabilising the fibrin clot. Protein-glutamine gamma-glutamyltransferases (2.3.2.13 from EC) are calcium-dependent enzymes that catalyse the cross-linking of proteins by promoting the formation of isopeptide bonds between the gamma-carboxyl group of a glutamine in one polypeptide chain and the epsilon-amino group of a lysine in a second polypeptide chain. TGases also catalyse the conjugation of polyamines to proteins [, ].; GO: 0003810 protein-glutamine gamma-glutamyltransferase activity, 0018149 peptide cross-linking; PDB: 2XZZ_A 1GGY_B 1FIE_B 1GGU_B 1GGT_B 1F13_A 1QRK_B 1EVU_A 1EX0_B 1L9N_B ....

>PF07919 Gryzun: Gryzun, putative trafficking through Golgi; InterPro: IPR012880 The proteins featured in this family are all hypothetical eukaryotic proteins of unknown function

Probab=95.58  E-value=2.7  Score=45.32  Aligned_cols=219  Identities=12%  Similarity=0.164  Sum_probs=119.2

Q ss_pred             CeEEEEEEEE----eCCceEEEEEEEecccccEEEEeEEeeecCCceeeeecCCCC-CCCCCCcc---ccccCCceEEeC
Q 013597          195 PLSVRTKVRV----VKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKADGP-HSDYNAQS---REIFKPPVLIRS  266 (439)
Q Consensus       195 Pl~VktK~~~----~~~~~~LEaqiqN~s~~~l~le~v~Lep~~~~~~~~ln~~~~-~~~~~~~~---~~~~~~~~l~~~  266 (439)
                      +|+.+..|..    .++.+.+++.|.+..+.||.+.++++.-+..-.-..+..+.. ....+.+.   ...-....+.+.
T Consensus        11 ~l~~~~~F~~~~~~~~~~~~~ql~i~S~~~~pi~~s~l~V~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~l~   90 (554)
T PF07919_consen   11 FLEASVAFSQSEGKVGEPVQFQLSIRSNAPSPIRFSSLKVNFSGSLYPIVISHSDADASSADSSTSSGSPLSGSADLTLS   90 (554)
T ss_pred             cEEEEEEEccCCccCCCeEEEEEEEEcCCCCCEEeeEEEEEeeCCCCCceEeccccccccccCcccccccccCccceEEe
Confidence            4555555553    256788899999999999999999998665422211111110 00000000   001123345667


Q ss_pred             CCCeeeEEEEEeecCCCCCCCccc-cCceeeE----EEEEEEEcCCCCC---ceeeEEE-------E--------eeecC
Q 013597          267 GGGIHNYLYQLKMLSHGSSSPVKV-QGSNVLG----KLQITWRTNLGEP---GRLQTQQ-------I--------LGTTI  323 (439)
Q Consensus       267 ~gd~~q~lf~l~~~~~~~~~~~~~-~g~~~lG----kL~I~WRs~~Ge~---G~LqTs~-------l--------~~~~p  323 (439)
                      ||....|-|.+.++.......... .-...+|    .+.+.|+-..+..   ....++.       +        .+-.|
T Consensus        91 p~~~kv~~~~~~~~~~~~~g~~~i~sv~L~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~I~p  170 (554)
T PF07919_consen   91 PGQTKVFSFKFVPREQDVSGELEITSVTLQLGSDKFDLTLSWSFESSSSSSSFWWWQSSDGPKSRPIRKPRDQSSIRILP  170 (554)
T ss_pred             ecceEEEEEEEeccccccCCcEEEEEEEEEEecCeEEEEEEeccccccccccccccccCCcceeeeccCCCCCCEEEEEC
Confidence            888888888887765211011111 1123455    3555676542221   1111110       0        11123


Q ss_pred             ccCCeEEEEEecCceeEeCCcEEEEEEEEeCCCCCccc-EEEEEE--------eCCCCCcceEEEec-------ccceee
Q 013597          324 TSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGP-FEIWLS--------QNDSDEEKVVMING-------LRIMAL  387 (439)
Q Consensus       324 ~~~dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~~~~-l~l~l~--------~~~~~~~~~~~~~G-------~s~~~L  387 (439)
                      ....+++.+.+.-....++|.+.+.++|.|..++.... +.+.+-        ...+......-|.+       .....+
T Consensus       171 ~pp~v~I~~~~~~~~~l~gE~~~i~i~I~n~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  250 (554)
T PF07919_consen  171 RPPKVSIKLPNHKPPALTGEFYPIPITISNNEDEEASGVLEVRLLHPSQLGVSSEETEDLSQVNWDSDKDDEPLFLGIPL  250 (554)
T ss_pred             CCCCeEEEeCCCCCCeEcCCEEEEEEEEEcCCCccceeEEEEEEecccccccccccCccceecccccccccchhccCccc
Confidence            44556666644445678999999999999997766551 333333        01100111122333       335678


Q ss_pred             cccCCCCeeEEEEEEEecccceEEeC
Q 013597          388 APVEAFGSTDFHLNLIATKLGVQRIT  413 (439)
Q Consensus       388 g~L~P~~s~~~~L~l~pl~~Glq~is  413 (439)
                      |.|.++++.+..+.+....+|-..|.
T Consensus       251 g~l~~~~s~~~~l~i~~~~~~~~~L~  276 (554)
T PF07919_consen  251 GELAPGSSITVTLYIRTSRPGEYELS  276 (554)
T ss_pred             ccCCCCCcEEEEEEEEeCCceeEEEE
Confidence            99999999999999887666666554

The region in question is approximately 150 residues long.

>PF10633 NPCBM_assoc: NPCBM-associated, NEW3 domain of alpha-galactosidase; InterPro: IPR018905 This domain has been named NEW3, but its function is not known

Probab=95.24  E-value=0.05  Score=43.24  Aligned_cols=72  Identities=22%  Similarity=0.321  Sum_probs=45.6

Q ss_pred             cceEEEEEEEEcCCCcceEEEEEEEEEeCCCeeEeccCCCCCCccccCCCCeeeEEEEEEccc---cCceEEEEEEEEE
Q 013597          100 GETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKE---LGAHTLVCTALYS  175 (439)
Q Consensus       100 GEtFs~~i~v~N~s~~~v~~V~ikaelqT~s~r~~L~~~~~~~~~~L~pg~~ld~iv~~~lke---~G~h~L~c~VsY~  175 (439)
                      ||++...+.|.|.....++++.+.+++  |..+. . ......+..|+||++....+...+-+   .|.|.+.+.+.|+
T Consensus         4 G~~~~~~~tv~N~g~~~~~~v~~~l~~--P~GW~-~-~~~~~~~~~l~pG~s~~~~~~V~vp~~a~~G~y~v~~~a~y~   78 (78)
T PF10633_consen    4 GETVTVTLTVTNTGTAPLTNVSLSLSL--PEGWT-V-SASPASVPSLPPGESVTVTFTVTVPADAAPGTYTVTVTARYT   78 (78)
T ss_dssp             TEEEEEEEEEE--SSS-BSS-EEEEE----TTSE-----EEEEE--B-TTSEEEEEEEEEE-TT--SEEEEEEEEEE--
T ss_pred             CCEEEEEEEEEECCCCceeeEEEEEeC--CCCcc-c-cCCccccccCCCCCEEEEEEEEECCCCCCCceEEEEEEEEeC
Confidence            999999999999999999998888776  55443 1 11112344899999888777777744   5999999999995

It is found on proteins which are bacterial galactosidases [].; PDB: 1EUT_A 2BZD_A 1WCQ_C 2BER_A 1W8O_A 1EUU_A 1W8N_A.

>PF14874 PapD-like: Flagellar-associated PapD-like

Probab=94.86  E-value=0.31  Score=40.38  Aligned_cols=73  Identities=16%  Similarity=0.299  Sum_probs=53.3

Q ss_pred             cccceeecceEEEEEEEEcCCCcceEEEEEEEEEeC-CCeeEeccCCCCCCccccCCCCeeeEEEEEE-ccccCceEEEE
Q 013597           93 AFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQT-DKQRILLLDTSKSPVESIRAGGRYDFIVEHD-VKELGAHTLVC  170 (439)
Q Consensus        93 sfG~iylGEtFs~~i~v~N~s~~~v~~V~ikaelqT-~s~r~~L~~~~~~~~~~L~pg~~ld~iv~~~-lke~G~h~L~c  170 (439)
                      .||++.+|++.+..|.+.|.+..++   ++++.... .+..+....    .-+.|+||++.+.-|.+. -++.|.+.-..
T Consensus        12 dFG~v~~g~~~~~~v~l~N~s~~p~---~f~v~~~~~~~~~~~v~~----~~g~l~PG~~~~~~V~~~~~~~~g~~~~~l   84 (102)
T PF14874_consen   12 DFGNVFVGQTYSRTVTLTNTSSIPA---RFRVRQPESLSSFFSVEP----PSGFLAPGESVELEVTFSPTKPLGDYEGSL   84 (102)
T ss_pred             EeeEEccCCEEEEEEEEEECCCCCE---EEEEEeCCcCCCCEEEEC----CCCEECCCCEEEEEEEEEeCCCCceEEEEE
Confidence            6999999999999999999998874   44444443 222333311    234799999999999999 88889875444


Q ss_pred             EE
Q 013597          171 TA  172 (439)
Q Consensus       171 ~V  172 (439)
                      .|
T Consensus        85 ~i   86 (102)
T PF14874_consen   85 VI   86 (102)
T ss_pred             EE
Confidence            44

>PF07705 CARDB: CARDB; InterPro: IPR011635 The APHP (acidic peptide-dependent hydrolases/peptidase) domain is found in a variety of different proteins

Probab=93.38  E-value=0.28  Score=39.88  Aligned_cols=77  Identities=13%  Similarity=0.204  Sum_probs=54.7

Q ss_pred             cccceeecceEEEEEEEEcCCCcceEEEEEEEEEeCCCeeEeccCCCCCCccccCCCCeeeEEEEEEccccCceEEEEEE
Q 013597           93 AFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTA  172 (439)
Q Consensus        93 sfG~iylGEtFs~~i~v~N~s~~~v~~V~ikaelqT~s~r~~L~~~~~~~~~~L~pg~~ld~iv~~~lke~G~h~L~c~V  172 (439)
                      +-+.++.|+.+...+.|.|.......++.++..+  ....+   .  ...+..|+||++....+.+...+.|.|.+.+.|
T Consensus        11 ~~~~~~~g~~~~i~~~V~N~G~~~~~~~~v~~~~--~~~~~---~--~~~i~~L~~g~~~~v~~~~~~~~~G~~~i~~~i   83 (101)
T PF07705_consen   11 SPSNVVPGEPVTITVTVKNNGTADAENVTVRLYL--DGNSV---S--TVTIPSLAPGESETVTFTWTPPSPGSYTIRVVI   83 (101)
T ss_dssp             C-SEEETTSEEEEEEEEEE-SSS-BEEEEEEEEE--TTEEE---E--EEEESEB-TTEEEEEEEEEE-SS-CEEEEEEEE
T ss_pred             CCCcccCCCEEEEEEEEEECCCCCCCCEEEEEEE--CCcee---c--cEEECCcCCCcEEEEEEEEEeCCCCeEEEEEEE
Confidence            3456889999999999999988888888777533  22222   1  123568999999999999999999999999988


Q ss_pred             EEEc
Q 013597          173 LYSD  176 (439)
Q Consensus       173 sY~~  176 (439)
                      .+..
T Consensus        84 D~~n   87 (101)
T PF07705_consen   84 DPDN   87 (101)
T ss_dssp             STTT
T ss_pred             eeCC
Confidence            6643

; PDB: 2KUT_A 2L0D_A 3IDU_A 2KL6_A.

>PF05753 TRAP_beta: Translocon-associated protein beta (TRAPB); InterPro: IPR008856 This family consists of several eukaryotic translocon-associated protein beta (TRAPB) or signal sequence receptor beta subunit (SSR-beta) proteins

Probab=92.46  E-value=1.7  Score=40.58  Aligned_cols=81  Identities=9%  Similarity=0.035  Sum_probs=62.7

Q ss_pred             cCceeEeCCcEEEEEEEEeCCCCCcccEEEEEEeCCCCCcce-EEEecccceeecccCCCCeeEEEEEEEecccceEEeC
Q 013597          335 VPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKV-VMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRIT  413 (439)
Q Consensus       335 ~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~-~~~~G~s~~~Lg~L~P~~s~~~~L~l~pl~~Glq~is  413 (439)
                      ++..+..++-++|++.|.|.-+....  .|.+..+.= .... -++.|.....+..|+||++..+.+.+-|...|...+.
T Consensus        30 l~~~~v~g~~v~V~~~iyN~G~~~A~--dV~l~D~~f-p~~~F~lvsG~~s~~~~~i~pg~~vsh~~vv~p~~~G~f~~~  106 (181)
T PF05753_consen   30 LNKYLVEGEDVTVTYTIYNVGSSAAY--DVKLTDDSF-PPEDFELVSGSLSASWERIPPGENVSHSYVVRPKKSGYFNFT  106 (181)
T ss_pred             ccccccCCcEEEEEEEEEECCCCeEE--EEEEECCCC-CccccEeccCceEEEEEEECCCCeEEEEEEEeeeeeEEEEcc
Confidence            45667789999999999999555432  355544210 1123 3688988899999999999999999999999999999


Q ss_pred             ceEEE
Q 013597          414 GITVF  418 (439)
Q Consensus       414 gI~l~  418 (439)
                      .-.|.
T Consensus       107 ~a~Vt  111 (181)
T PF05753_consen  107 PAVVT  111 (181)
T ss_pred             CEEEE
Confidence            97775

The normal translocation of nascent polypeptides into the lumen of the endoplasmic reticulum (ER) is thought to be aided in part by a translocon-associated protein (TRAP) complex consisting of 4 protein subunits. The association of mature proteins with the ER and Golgi, or other intracellular locales, such as lysosomes, depends on the initial targeting of the nascent polypeptide to the ER membrane. A similar scenario must also exist for proteins destined for secretion [].; GO: 0005783 endoplasmic reticulum, 0016021 integral to membrane

>PF10633 NPCBM_assoc: NPCBM-associated, NEW3 domain of alpha-galactosidase; InterPro: IPR018905 This domain has been named NEW3, but its function is not known

Probab=91.24  E-value=0.69  Score=36.61  Aligned_cols=59  Identities=10%  Similarity=0.021  Sum_probs=34.2

Q ss_pred             EeCCcEEEEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEecccceeecccCCCCeeEEEEEEEe
Q 013597          340 GIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIA  404 (439)
Q Consensus       340 ~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l~p  404 (439)
                      .-++++++++.|+|..+..+..+.++++--+     ++- ...+...++.|.||++.++.+.+-|
T Consensus         2 ~~G~~~~~~~tv~N~g~~~~~~v~~~l~~P~-----GW~-~~~~~~~~~~l~pG~s~~~~~~V~v   60 (78)
T PF10633_consen    2 TPGETVTVTLTVTNTGTAPLTNVSLSLSLPE-----GWT-VSASPASVPSLPPGESVTVTFTVTV   60 (78)
T ss_dssp             -TTEEEEEEEEEE--SSS-BSS-EEEEE--T-----TSE----EEEEE--B-TTSEEEEEEEEEE
T ss_pred             CCCCEEEEEEEEEECCCCceeeEEEEEeCCC-----Ccc-ccCCccccccCCCCCEEEEEEEEEC
Confidence            4578999999999996655444777776532     333 2333456669999999999998765

It is found on proteins which are bacterial galactosidases [].; PDB: 1EUT_A 2BZD_A 1WCQ_C 2BER_A 1W8O_A 1EUU_A 1W8N_A.

>PF05753 TRAP_beta: Translocon-associated protein beta (TRAPB); InterPro: IPR008856 This family consists of several eukaryotic translocon-associated protein beta (TRAPB) or signal sequence receptor beta subunit (SSR-beta) proteins

Probab=89.34  E-value=3.1  Score=38.80  Aligned_cols=82  Identities=21%  Similarity=0.215  Sum_probs=63.0

Q ss_pred             eecceEEEEEEEEcCCCcceEEEEEEEEEeCCCeeEeccCCC-CCCccccCCCCeeeEEEEEEccccCceEE-EEEEEEE
Q 013597           98 YLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTS-KSPVESIRAGGRYDFIVEHDVKELGAHTL-VCTALYS  175 (439)
Q Consensus        98 ylGEtFs~~i~v~N~s~~~v~~V~ikaelqT~s~r~~L~~~~-~~~~~~L~pg~~ld~iv~~~lke~G~h~L-~c~VsY~  175 (439)
                      -.|+.....+.+-|.-+.++.||.|.-+= -++....|.... ......|.||+++.-++.-.=+..|.|.+ ...|+|+
T Consensus        35 v~g~~v~V~~~iyN~G~~~A~dV~l~D~~-fp~~~F~lvsG~~s~~~~~i~pg~~vsh~~vv~p~~~G~f~~~~a~VtY~  113 (181)
T PF05753_consen   35 VEGEDVTVTYTIYNVGSSAAYDVKLTDDS-FPPEDFELVSGSLSASWERIPPGENVSHSYVVRPKKSGYFNFTPAVVTYR  113 (181)
T ss_pred             cCCcEEEEEEEEEECCCCeEEEEEEECCC-CCccccEeccCceEEEEEEECCCCeEEEEEEEeeeeeEEEEccCEEEEEE
Confidence            45999999999999999999999998721 133444443221 12356899999998888888899999988 6779999


Q ss_pred             cCCCc
Q 013597          176 DGEGE  180 (439)
Q Consensus       176 ~~~Ge  180 (439)
                      ...|.
T Consensus       114 ~~~~~  118 (181)
T PF05753_consen  114 DSEGA  118 (181)
T ss_pred             CCCCC
Confidence            87663

The normal translocation of nascent polypeptides into the lumen of the endoplasmic reticulum (ER) is thought to be aided in part by a translocon-associated protein (TRAP) complex consisting of 4 protein subunits. The association of mature proteins with the ER and Golgi, or other intracellular locales, such as lysosomes, depends on the initial targeting of the nascent polypeptide to the ER membrane. A similar scenario must also exist for proteins destined for secretion [].; GO: 0005783 endoplasmic reticulum, 0016021 integral to membrane

>PF11797 DUF3324: Protein of unknown function C-terminal (DUF3324); InterPro: IPR021759 This family consists of several hypothetical bacterial proteins of unknown function

Probab=87.44  E-value=4.7  Score=35.83  Aligned_cols=93  Identities=13%  Similarity=0.181  Sum_probs=68.8

Q ss_pred             cceeecc---eEEEEEEEEcCCCcceEEEEEEEEEeCCCeeEeccCCCCCCccccCCCCeeeEEEEEE--ccccCceEEE
Q 013597           95 GAIYLGE---TFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHD--VKELGAHTLV  169 (439)
Q Consensus        95 G~iylGE---tFs~~i~v~N~s~~~v~~V~ikaelqT~s~r~~L~~~~~~~~~~L~pg~~ld~iv~~~--lke~G~h~L~  169 (439)
                      +++-+|+   .....+.+.|....-+.++.+++++.-..+.-.+.... .....++|+..+++-|..+  -=..|.|+|.
T Consensus        33 ~~v~~~~~n~~~~i~~~l~N~~~~~l~~~~v~a~V~~~~~~k~~~~~~-~~~~~mAPNS~f~~~i~~~~~~lk~G~Y~l~  111 (140)
T PF11797_consen   33 GKVKPGQINGRNVIQANLQNPQPAILKKLTVDAKVTKKGSKKVLYTFK-KENMQMAPNSNFNFPIPLGGKKLKPGKYTLK  111 (140)
T ss_pred             eeeeeeEECCeeEEEEEEECCCchhhcCcEEEEEEEECCCCeEEEEee-ccCCEECCCCeEEeEecCCCcCccCCEEEEE
Confidence            4444444   66677889999999999999999999988754443322 2245799999999988885  4456999999


Q ss_pred             EEEEEEcCCCceeeeceEEEEE
Q 013597          170 CTALYSDGEGERKYLPQFFKFI  191 (439)
Q Consensus       170 c~VsY~~~~Ge~~~frK~fkF~  191 (439)
                      .++.+..   +...|.|-|+..
T Consensus       112 ~~~~~~~---~~W~f~k~F~It  130 (140)
T PF11797_consen  112 ITAKSGK---KTWTFTKDFTIT  130 (140)
T ss_pred             EEEEcCC---cEEEEEEEEEEC
Confidence            9987643   356777766653

>smart00809 Alpha_adaptinC2 Adaptin C-terminal domain

Probab=86.25  E-value=12  Score=30.72  Aligned_cols=74  Identities=14%  Similarity=0.151  Sum_probs=58.9

Q ss_pred             cceEEEEEEEEcCCCcceEEEEEEEEEeCCCeeEeccCCCCCCccccCCCCeeeEEEEEEccccCceEEEEEEEEEcC
Q 013597          100 GETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDG  177 (439)
Q Consensus       100 GEtFs~~i~v~N~s~~~v~~V~ikaelqT~s~r~~L~~~~~~~~~~L~pg~~ld~iv~~~lke~G~h~L~c~VsY~~~  177 (439)
                      +...+..+.+.|.+..++++..+.+-. .....+.+...+   ...|.||+.+...+.......+.-.+.+.|+|..+
T Consensus        17 ~~~~~i~~~~~N~s~~~it~f~~~~av-pk~~~l~l~~~s---~~~l~p~~~i~q~~~i~~~~~~~~~~~~~vsy~~~   90 (104)
T smart00809       17 PGLIRITLTFTNKSPSPITNFSFQAAV-PKSLKLQLQPPS---SPTLPPGGQITQVLKVENPGKFPLRLRLRLSYLLG   90 (104)
T ss_pred             CCeEEEEEEEEeCCCCeeeeEEEEEEc-ccceEEEEcCCC---CCccCCCCCEEEEEEEECCCCCCEEEEEEEEEEEC
Confidence            445678888999999999999998863 445666664322   24689999999999999988888999999999986

Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. Gamma-adaptin is a subunit of the golgi adaptor. Alpha adaptin is a heterotetramer that regulates clathrin-bud formation. The carboxyl-terminal appendage of the alpha subunit regulates translocation of endocytic accessory proteins to the bud site. This Ig-fold domain is found in alpha, beta and gamma adaptins and consists of a beta-sandwich containing 7 strands in 2 beta-sheets in a greek-key topology PUBMED:10430869, PUBMED:12176391. The adaptor appendage contains an additional N-terminal strand.

>PF14874 PapD-like: Flagellar-associated PapD-like

Probab=84.86  E-value=6.9  Score=32.14  Aligned_cols=66  Identities=12%  Similarity=0.126  Sum_probs=48.1

Q ss_pred             eeEeCCcEEEEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEecccceeecccCCCCeeEEEEEEE-ecccceEE
Q 013597          338 VVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLI-ATKLGVQR  411 (439)
Q Consensus       338 ~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l~-pl~~Glq~  411 (439)
                      .+.+++....++.|+|.+..... +.++.....   ...|.+.-.    =|.|.||.+.++.+.+. +-..|...
T Consensus        15 ~v~~g~~~~~~v~l~N~s~~p~~-f~v~~~~~~---~~~~~v~~~----~g~l~PG~~~~~~V~~~~~~~~g~~~   81 (102)
T PF14874_consen   15 NVFVGQTYSRTVTLTNTSSIPAR-FRVRQPESL---SSFFSVEPP----SGFLAPGESVELEVTFSPTKPLGDYE   81 (102)
T ss_pred             EEccCCEEEEEEEEEECCCCCEE-EEEEeCCcC---CCCEEEECC----CCEECCCCEEEEEEEEEeCCCCceEE
Confidence            46789999999999999998876 666553311   234555432    35789999999999999 55567654

>PF02883 Alpha_adaptinC2: Adaptin C-terminal domain; InterPro: IPR008152 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=84.25  E-value=22  Score=29.87  Aligned_cols=75  Identities=11%  Similarity=0.113  Sum_probs=54.8

Q ss_pred             ecceEEEEEEEEcCCCcceEEEEEEEEEeCCCeeEeccCCCCCCccccCCCCeeeEEEEEEc-----cccCceEEEEEEE
Q 013597           99 LGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDV-----KELGAHTLVCTAL  173 (439)
Q Consensus        99 lGEtFs~~i~v~N~s~~~v~~V~ikaelqT~s~r~~L~~~~~~~~~~L~pg~~ld~iv~~~l-----ke~G~h~L~c~Vs  173 (439)
                      =+...+..+.+.|.+..+++++.+.+..- .+..+.|...   +...|.|++.+.-.+..+.     .....-.+.+.|+
T Consensus        22 ~~~~~~i~~~f~N~s~~~it~f~~q~avp-k~~~l~l~~~---s~~~i~p~~~i~Q~~~v~~~~~~~~~~~~l~~~~~vs   97 (115)
T PF02883_consen   22 NPNQGRIKLTFGNKSSQPITNFSFQAAVP-KSFKLQLQPP---SSSTIPPGQQITQVIKVENSPFSEPTPKPLKPRLRVS   97 (115)
T ss_dssp             ETTEEEEEEEEEE-SSS-BEEEEEEEEEB-TTSEEEEEES---S-SSB-TTTEEEEEEEEEESS-BSTTSSTTEEEEEEE
T ss_pred             CCCEEEEEEEEEECCCCCcceEEEEEEec-cccEEEEeCC---CCCeeCCCCeEEEEEEEEEeecccCCCCCcCeEEEEE
Confidence            46677888999999999999999998766 6666666432   2346889999999999999     2222338999999


Q ss_pred             EEcC
Q 013597          174 YSDG  177 (439)
Q Consensus       174 Y~~~  177 (439)
                      |...
T Consensus        98 y~~~  101 (115)
T PF02883_consen   98 YNVG  101 (115)
T ss_dssp             EEET
T ss_pred             EEEC
Confidence            9985

These vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transport []. Clathrin coats contain both clathrin (acts as a scaffold) and adaptor complexes that link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. The two major types of clathrin adaptor complexes are the heterotetrameric adaptor protein (AP) complexes, and the monomeric GGA (Golgi-localising, Gamma-adaptin ear domain homology, ARF-binding proteins) adaptors [, ]. AP (adaptor protein) complexes are found in coated vesicles and clathrin-coated pits. AP complexes connect cargo proteins and lipids to clathrin at vesicle budding sites, as well as binding accessory proteins that regulate coat assembly and disassembly (such as AP180, epsins and auxilin). There are different AP complexes in mammals. AP1 is responsible for the transport of lysosomal hydrolases between the TGN and endosomes []. AP2 associates with the plasma membrane and is responsible for endocytosis []. AP3 is responsible for protein trafficking to lysosomes and other related organelles []. AP4 is less well characterised. AP complexes are heterotetramers composed of two large subunits (adaptins), a medium subunit (mu) and a small subunit (sigma). For example, in AP1 these subunits are gamma-1-adaptin, beta-1-adaptin, mu-1 and sigma-1, while in AP2 they are alpha-adaptin, beta-2-adaptin, mu-2 and sigma-2. Each subunit has a specific function. Adaptins recognise and bind to clathrin through their hinge region (clathrin box), and recruit accessory proteins that modulate AP function through their C-terminal ear (appendage) domains. Mu recognises tyrosine-based sorting signals within the cytoplasmic domains of transmembrane cargo proteins []. One function of clathrin and AP2 complex-mediated endocytosis is to regulate the number of GABA(A) receptors available at the cell surface []. GGAs (Golgi-localising, Gamma-adaptin ear domain homology, ARF-binding proteins) are a family of monomeric clathrin adaptor proteins that are conserved from yeasts to humans. GGAs regulate clathrin-mediated the transport of proteins (such as mannose 6-phosphate receptors) from the TGN to endosomes and lysosomes through interactions with TGN-sorting receptors, sometimes in conjunction with AP-1 [, ]. GGAs bind cargo, membranes, clathrin and accessory factors. GGA1, GGA2 and GGA3 all contain a domain homologous to the ear domain of gamma-adaptin. GGAs are composed of a single polypeptide with four domains: an N-terminal VHS (Vps27p/Hrs/Stam) domain, a GAT (GGA and Tom1) domain, a hinge region, and a C-terminal GAE (gamma-adaptin ear) domain. The VHS domain is responsible for endocytosis and signal transduction, recognising transmembrane cargo through the ACLL sequence in the cytoplasmic domains of sorting receptors []. The GAT domain (also found in Tom1 proteins) interacts with ARF (ADP-ribosylation factor) to regulate membrane trafficking [], and with ubiquitin for receptor sorting []. The hinge region contains a clathrin box for recognition and binding to clathrin, similar to that found in AP adaptins. The GAE domain is similar to the AP gamma-adaptin ear domain, and is responsible for the recruitment of accessory proteins that regulate clathrin-mediated endocytosis []. This entry represents a beta-sandwich structural motif found in the appendage (ear) domain of alpha-, beta- and gamma-adaptin from AP clathrin adaptor complexes, and the GAE (gamma-adaptin ear) domain of GGA adaptor proteins. These domains have an immunoglobulin-like beta-sandwich fold containing 7 or 8 strands in 2 beta-sheets in a Greek key topology [, ]. Although these domains share a similar fold, there is little sequence identity between the alpha/beta-adaptins and gamma-adaptin/GAE. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030131 clathrin adaptor complex; PDB: 3MNM_B 3ZY7_B 1GYU_A 1GYW_B 2A7B_A 1GYV_A 2E9G_A 1E42_B 2G30_A 2IV9_B ....

>PF00207 A2M: Alpha-2-macroglobulin family; InterPro: IPR001599 This entry contains serum complement C3 and C4 precursors and alpha-macrogrobulins

Probab=82.84  E-value=5.5  Score=32.47  Aligned_cols=42  Identities=19%  Similarity=0.267  Sum_probs=29.2

Q ss_pred             CccCCeEEEEEecCceeEeCCcEEEEEEEEeCCCCCcccEEEEE
Q 013597          323 ITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWL  366 (439)
Q Consensus       323 p~~~dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l  366 (439)
                      -..+++-+.+ ++|..++.++.+.+.+.|.|+.+..++ ++|.|
T Consensus        51 ~v~~p~~i~~-~lP~~l~~GD~~~i~v~v~N~~~~~~~-v~V~l   92 (92)
T PF00207_consen   51 TVFKPFFIQL-NLPRSLRRGDQIQIPVTVFNYTDKDQE-VTVTL   92 (92)
T ss_dssp             EEB-SEEEEE-E--SEEETTSEEEEEEEEEE-SSS-EE-EEEEE
T ss_pred             EEEeeEEEEc-CCCcEEecCCEEEEEEEEEeCCCCCEE-EEEEC
Confidence            3455664443 899999999999999999999999877 66654

The alpha-macroglobulin (aM) family of proteins includes protease inhibitors [], typified by the human tetrameric a2-macroglobulin (a2M); they belong to the MEROPS proteinase inhibitor family I39, clan IL. These protease inhibitors share several defining properties, which include (i) the ability to inhibit proteases from all catalytic classes, (ii) the presence of a 'bait region' and a thiol ester, (iii) a similar protease inhibitory mechanism and (iv) the inactivation of the inhibitory capacity by reaction of the thiol ester with small primary amines. aM protease inhibitors inhibit by steric hindrance []. The mechanism involves protease cleavage of the bait region, a segment of the aM that is particularly susceptible to proteolytic cleavage, which initiates a conformational change such that the aM collapses about the protease. In the resulting aM-protease complex, the active site of the protease is sterically shielded, thus substantially decreasing access to protein substrates. Two additional events occur as a consequence of bait region cleavage, namely (i) the h-cysteinyl-g-glutamyl thiol ester becomes highly reactive and (ii) a major conformational change exposes a conserved COOH-terminal receptor binding domain [] (RBD). RBD exposure allows the aM protease complex to bind to clearance receptors and be removed from circulation []. Tetrameric, dimeric, and, more recently, monomeric aM protease inhibitors have been identified [, ].; GO: 0004866 endopeptidase inhibitor activity; PDB: 3KLS_B 3PRX_C 3KM9_B 3PVM_C 3CU7_A 4E0S_A 4A5W_A 2PN5_A 3FRP_G 3HRZ_B ....

>PF00927 Transglut_C: Transglutaminase family, C-terminal ig like domain; InterPro: IPR008958 Synonym(s): Protein-glutamine gamma-glutamyltransferase, Fibrinoligase, TGase Transglutaminases catalyse the post-translational modification of proteins at glutamine residues, with formation of isopeptide bonds

Probab=81.43  E-value=1.9  Score=36.16  Aligned_cols=75  Identities=19%  Similarity=0.219  Sum_probs=48.4

Q ss_pred             cceeecceEEEEEEEEcCCCcceEEEEEEEEEeCC----CeeEeccCCCCCCccccCCCCeeeEEEEEEccccCceEEEE
Q 013597           95 GAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTD----KQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVC  170 (439)
Q Consensus        95 G~iylGEtFs~~i~v~N~s~~~v~~V~ikaelqT~----s~r~~L~~~~~~~~~~L~pg~~ld~iv~~~lke~G~h~L~c  170 (439)
                      |.+.+|+.|.+.+.+.|.++..+++|.+....++-    -.+-....  .....+|+||+.....+...=++-|..-+.+
T Consensus         9 ~~~~vG~d~~v~v~~~N~~~~~l~~v~~~l~~~~v~ytG~~~~~~~~--~~~~~~l~p~~~~~~~~~i~p~~yG~~~~l~   86 (107)
T PF00927_consen    9 GDPVVGQDFTVSVSFTNPSSEPLRNVSLNLCAFTVEYTGLTRDQFKK--EKFEVTLKPGETKSVEVTITPSQYGPKQLLV   86 (107)
T ss_dssp             SEEBTTSEEEEEEEEEE-SSS-EECEEEEEEEEEEECTTTEEEEEEE--EEEEEEE-TTEEEEEEEEE-HHSHEEECCEE
T ss_pred             CCccCCCCEEEEEEEEeCCcCccccceeEEEEEEEEECCcccccEeE--EEcceeeCCCCEEEEEEEEEceeEecchhcc
Confidence            56789999999999999999999998887755543    11111111  1224578899988777777777777654444


Q ss_pred             E
Q 013597          171 T  171 (439)
Q Consensus       171 ~  171 (439)
                      .
T Consensus        87 ~   87 (107)
T PF00927_consen   87 D   87 (107)
T ss_dssp             E
T ss_pred             h
Confidence            3

Members of the transglutaminase family usually have three domains: N-terminal (IPR001102 from INTERPRO), middle (IPR013808 from INTERPRO) and C-terminal. The middle domain is usually well conserved, but family members can display major differences in their N- and C-terminal domains, although their overall structure is conserved []. This entry represents the C-terminal domain found in transglutaminases, which consists of an immunoglobulin-like beta-sandwich consisting of seven strands in two sheets with a Greek key topology. The best known transglutaminase is blood coagulation factor XIII, a plasma tetrameric protein composed of two catalytic A subunits and two non-catalytic B subunits. Factor XIII is responsible for cross-linking fibrin chains, thus stabilising the fibrin clot. Protein-glutamine gamma-glutamyltransferases (2.3.2.13 from EC) are calcium-dependent enzymes that catalyse the cross-linking of proteins by promoting the formation of isopeptide bonds between the gamma-carboxyl group of a glutamine in one polypeptide chain and the epsilon-amino group of a lysine in a second polypeptide chain. TGases also catalyse the conjugation of polyamines to proteins [, ].; GO: 0003810 protein-glutamine gamma-glutamyltransferase activity, 0018149 peptide cross-linking; PDB: 2XZZ_A 1GGY_B 1FIE_B 1GGU_B 1GGT_B 1F13_A 1QRK_B 1EVU_A 1EX0_B 1L9N_B ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	439
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 52.5 bits (125), Expect = 2e-07
 Identities = 71/408 (17%), Positives = 113/408 (27%), Gaps = 142/408 (34%)

Query: 115 LEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALY 174
            + +DV        D  + +L  + +            D I+       G   L  T L 
Sbjct: 33  FDCKDV-------QDMPKSIL--SKEE----------IDHIIMSKDAVSGTLRLFWTLLS 73

Query: 175 SDGEGERKY----LPQFFKFIVSNPLSVRTKVRVVKEITFLEACIENHTKSNLYMDQVEF 230
              E  +K+    L   +KF++S P+    +   +    ++E       +  LY D   F
Sbjct: 74  KQEEMVQKFVEEVLRINYKFLMS-PIKTEQRQPSMMTRMYIE------QRDRLYNDNQVF 126

Query: 231 EPSQNWSATMLKADGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLK---------MLS 281
                              YN  SR     P L      +   L +L+         +L 
Sbjct: 127 AK-----------------YNV-SRL---QPYL-----KLRQALLELRPAKNVLIDGVLG 160

Query: 282 HGSSSPVK--VQGSNVLGKL--QITWRTNLGEPGR----LQTQQILGTTIT--------- 324
            G +           V  K+  +I W  NL         L+  Q L   I          
Sbjct: 161 SGKTWVALDVCLSYKVQCKMDFKIFW-LNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDH 219

Query: 325 SKEIELNVVEV-------------------------PSVVGIDKPFLLKLK--LT----N 353
           S  I+L +  +                                  F L  K  LT     
Sbjct: 220 SSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAW---NAFNLSCKILLTTRFKQ 276

Query: 354 QTDKEQGPFEIWLSQNDS------DEEKVVMIN--GLRIMALAPVEAFGSTDFHLNLIAT 405
            TD         +S +        DE K +++     R   L P E   +    L++IA 
Sbjct: 277 VTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDL-PREVLTTNPRRLSIIAE 335

Query: 406 KL--GVQRITGI--TVFDKLEKI---TYDSLP---------DLEIFVD 437
            +  G+           DKL  I   + + L           L +F  
Sbjct: 336 SIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPP 383

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.0 bits (95), Expect = 8e-04
 Identities = 50/372 (13%), Positives = 95/372 (25%), Gaps = 104/372 (27%)

Query: 6   GTHSLAFRVMRLCR-PSLHVEPPLRVDPTDLF---IGEDIFDDPIAA--SNLPPLISSDV 59
           G   +A  V   C    +  +   ++     F   +      + +      L   I  + 
Sbjct: 162 GKTWVALDV---CLSYKVQCKMDFKI-----FWLNLKNCNSPETVLEMLQKLLYQIDPNW 213

Query: 60  TTNKSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRD 119
           T+        + R  +H       L  LL                 Y     +  L + +
Sbjct: 214 TSRSDHSSNIKLR--IHSIQAE--LRRLLKSKP-------------Y----ENCLLVLLN 252

Query: 120 V----VIKA-EIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELG-AHTLVCTAL 173
           V       A  +     +ILL    K   + + A       ++H    L           
Sbjct: 253 VQNAKAWNAFNLSC---KILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLK 309

Query: 174 YSDGEGERKYLPQFFKFIVSNPLSVRTKVRVVKEITFLEACIENHTKSNLYMDQVEFEPS 233
           Y D   +   LP+       NP            ++ +   I +   +            
Sbjct: 310 YLDCRPQD--LPREVLTT--NPRR----------LSIIAESIRDGLAT-----------W 344

Query: 234 QNWSATMLKADGPHSDYNAQSREIFK-----PPVLIRSGGGIHNYLYQLKMLSHGSSSPV 288
            NW          H + +  +  I        P   R          +L +    +  P 
Sbjct: 345 DNW---------KHVNCDKLTTIIESSLNVLEPAEYR------KMFDRLSVFPPSAHIPT 389

Query: 289 KVQGSNVLGKLQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGI-DKPFLL 347
            +        L + W     +  +     ++        +E    E  S + I      L
Sbjct: 390 IL--------LSLIW----FDVIKSDVMVVVNKLHKYSLVEKQPKE--STISIPSIYLEL 435

Query: 348 KLKLTNQTDKEQ 359
           K+KL N+    +
Sbjct: 436 KVKLENEYALHR 447

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	439
2xzz_A	102	Protein-glutamine gamma-glutamyltransferase K; 2.3	96.78
1ex0_A	731	Coagulation factor XIII A chain; transglutaminase,	96.25
1vjj_A	692	Protein-glutamine glutamyltransferase E; transglut	96.22
3hrz_B	252	Cobra venom factor; serine protease, glycosilated,	95.82
3idu_A	127	Uncharacterized protein; all beta-protein, structu	94.01
1g0d_A	695	Protein-glutamine gamma-glutamyltransferase; tissu	93.34
2q3z_A	687	Transglutaminase 2; transglutaminase 2, tissue tra	92.69
3es6_B	118	Prolactin-inducible protein; major histocompatibil	90.02
2qsv_A	220	Uncharacterized protein; MCSG, structural genomics	89.54
4fxk_B	767	Complement C4-A alpha chain; immune system, proteo	89.41
2ys4_A	122	Hydrocephalus-inducing protein homolog; hydin, PAP	88.97
4acq_A	1451	Alpha-2-macroglobulin; hydrolase inhibitor, protei	88.97
2hr0_B	915	Complement C3 alpha' chain; complement component C	88.61
3prx_B	1642	Cobra venom factor; immune system, complement, imm	88.34
2b39_A	1661	C3; thioester, immune defense, immune system; HET:	86.62
2pn5_A	1325	TEP1R, thioester-containing protein I; FULL-length	86.09
2xzz_A	102	Protein-glutamine gamma-glutamyltransferase K; 2.3	85.01
2ys4_A	122	Hydrocephalus-inducing protein homolog; hydin, PAP	81.69
1vjj_A	692	Protein-glutamine glutamyltransferase E; transglut	80.61

>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}

Probab=96.78  E-value=0.0033  Score=51.98  Aligned_cols=73  Identities=5%  Similarity=0.138  Sum_probs=61.0

Q ss_pred             ecCceeEeCCcEEEEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEecccceeecccCCCCeeEEEEEEEecccceEEeC
Q 013597          334 EVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRIT  413 (439)
Q Consensus       334 ~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l~pl~~Glq~is  413 (439)
                      +++...++++|+.+++.++|--...+....+.++...      + ..+ ....++.+.||++..+.+.+.|..+|.++|-
T Consensus        11 ~v~g~~~v~~~l~v~vsf~NPL~~~L~~c~~~vEG~G------L-~~~-~~~~~~~v~pg~~~~~~~~~~P~~~G~~~L~   82 (102)
T 2xzz_A           11 TLLGAAVVGQECEVQIVFKNPLPVTLTNVVFRLEGSG------L-QRP-KILNVGDIGGNETVTLRQSFVPVRPGPRQLI   82 (102)
T ss_dssp             EESSCCCSSSCEEEEEEEECCSSSCBCSEEEEEEETT------T-EEE-EEEEECCBCTTCEEEEEEEECCCSCSSCCCE
T ss_pred             EECCCcccCCeEEEEEEEECCCCCcccCEEEEEECCC------C-Ccc-eEEEcCcCCCCCEEEEEEEEecCcccceEEE
Confidence            5667778999999999999997777777889998764      2 344 5567899999999999999999999998874


Q ss_pred             c
Q 013597          414 G  414 (439)
Q Consensus       414 g  414 (439)
                      .
T Consensus        83 a   83 (102)
T 2xzz_A           83 A   83 (102)
T ss_dssp             E
T ss_pred             E
Confidence            3

>1ex0_A Coagulation factor XIII A chain; transglutaminase, blood coagulation, mutant, W279F, oxyanion, transferase; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1evu_A 1fie_A 1f13_A 1ggt_A 1ggu_A 1ggy_A 1qrk_A

Probab=96.25  E-value=0.045  Score=59.37  Aligned_cols=226  Identities=11%  Similarity=0.054  Sum_probs=126.2

Q ss_pred             EEEEEEccccCceEEEEEE----------EEEcCCC---ceeeeceEEEE----------Ee--ecCeEEEEEEE--EeC
Q 013597          154 FIVEHDVKELGAHTLVCTA----------LYSDGEG---ERKYLPQFFKF----------IV--SNPLSVRTKVR--VVK  206 (439)
Q Consensus       154 ~iv~~~lke~G~h~L~c~V----------sY~~~~G---e~~~frK~fkF----------~v--~~Pl~VktK~~--~~~  206 (439)
                      ..++.+-+.+|..|..=+|          .|.-+.|   |+..|.|..++          .-  ..++.++-|.-  .++
T Consensus       451 ~~~~~~t~~VG~~ISTKaVG~d~ReDIT~~YKypEGS~eER~~~~kA~~~~~~~~~~~~~~~~~~~~v~~~i~~~~~~iG  530 (731)
T 1ex0_A          451 VVENVDATHIGKLIVTKQIGGDGMMDITDTYKFQEGQEEERLALETALMYGAKKPLNTSRSMKSRSNVDMDFEVENAVLG  530 (731)
T ss_dssp             EEEEEECSSTTCEEEEECSSSSCEEECHHHHCCCTTSHHHHHHHHHHHTTTCBCCSCCCCC-----CEEEEEEECCCBTT
T ss_pred             EEEeeccccccceEeccCCCCCCcccccccCcCCCCCHHHHHHHHHHHhhcccccccccccccCCCCeEEEEecCCCCCC
Confidence            3567777888888877666          5555554   22333222221          00  12344444441  135


Q ss_pred             CceEEEEEEEecccccEEEEeEEeeecC-CceeeeecCCCCCCCCCCcccccc-CCceEEeCCCCeeeEEEEEeecCCCC
Q 013597          207 EITFLEACIENHTKSNLYMDQVEFEPSQ-NWSATMLKADGPHSDYNAQSREIF-KPPVLIRSGGGIHNYLYQLKMLSHGS  284 (439)
Q Consensus       207 ~~~~LEaqiqN~s~~~l~le~v~Lep~~-~~~~~~ln~~~~~~~~~~~~~~~~-~~~~l~~~~gd~~q~lf~l~~~~~~~  284 (439)
                      +++-|.+.+.|.|...-.+ ++.|.... -|+-..          ..   .+. ..-.+.++|++....-..|....-..
T Consensus       531 ~df~v~l~~~N~s~~~~~v-~~~l~a~~v~YtG~~----------~~---~~~~~~~~~~L~p~~~~~i~~~i~y~~Y~~  596 (731)
T 1ex0_A          531 KDFKLSITFRNNSHNRYTI-TAYLSANITFYTGVP----------KA---EFKKETFDVTLEPLSFKKEAVLIQAGEYMG  596 (731)
T ss_dssp             CCEEEEEEEEECSSSCEEE-EEEEEEEEECTTSCE----------EE---EEEEEEEEEEECTTEEEEEEEEECHHHHTT
T ss_pred             CCEEEEEEEEECCCCCEEE-EEEEEEEEEeeCCcc----------cc---ceeEeeEEEEECCCceEEEEEEECHHHHhh
Confidence            7899999999999876321 22222111 111100          00   011 11234566777777766666654321


Q ss_pred             CCCccccCceeeEEEEEEEEcCCCCCceeeEEEEeee-cCccCCeEEEEEecCceeEeCCcEEEEEEEEeCCCCCcccEE
Q 013597          285 SSPVKVQGSNVLGKLQITWRTNLGEPGRLQTQQILGT-TITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFE  363 (439)
Q Consensus       285 ~~~~~~~g~~~lGkL~I~WRs~~Ge~G~LqTs~l~~~-~p~~~dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~  363 (439)
                        ....+....  -.-+..-...++.-.-     ++. .....+|.|.+   |...++++|+.+++.++|--+.++..-.
T Consensus       597 --~L~d~~~i~--~~a~~~v~et~~~~~~-----~~di~l~~P~l~I~v---~g~~~v~~~l~v~vsf~NPL~~~L~~c~  664 (731)
T 1ex0_A          597 --QLLEQASLH--FFVTARINETRDVLAK-----QKSTVLTIPEIIIKV---RGTQVVGSDMTVTVQFTNPLKETLRNVW  664 (731)
T ss_dssp             --TCCTTCEEE--EEEEEEETTTCCEEEE-----EEEEECBCCCCEEEE---EECCBTTSCEEEEEEEECCSSSCEEEEE
T ss_pred             --hccCCCEEE--EEEEEEECCCCeEEEE-----EEEEEEeCCCEEEEe---CCCcccCCeEEEEEEEECCCCCcccceE
Confidence              111111111  1122222322221111     111 23344565554   4556799999999999999777777688


Q ss_pred             EEEEeCCCCCcceEEEecccceeecccCCCCeeEEEEEEEecccceEEeC
Q 013597          364 IWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRIT  413 (439)
Q Consensus       364 l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l~pl~~Glq~is  413 (439)
                      +.++...      + ..+ ..+.++.|.||++..+.+.+.|..+|.++|-
T Consensus       665 ~~vEG~G------L-~~~-~~~~~~~v~pg~~~~~~~~~~P~~~G~r~L~  706 (731)
T 1ex0_A          665 VHLDGPG------V-TRP-MKKMFREIRPNSTVQWEEVCRPWVSGHRKLI  706 (731)
T ss_dssp             EEEEETT------T-EEE-EEEEEEEECTTCEEEEEEEECCSSCEEEEEE
T ss_pred             EEEECCC------C-Cce-eeEecCccCCCCEEEEEEEEEeccccceEEE
Confidence            8888764      2 233 5577899999999999999999999999974

>1vjj_A Protein-glutamine glutamyltransferase E; transglutaminase 3, X-RAY crystallography, metalloenzyme, calcium ION; HET: GDP; 1.90A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1sgx_A* 1l9m_A 1l9n_A* 1nud_A 1nuf_A 1nug_A 1rle_A*

Probab=96.22  E-value=0.25  Score=53.41  Aligned_cols=183  Identities=11%  Similarity=0.179  Sum_probs=108.0

Q ss_pred             CeEEEEEEE---EeCCceEEEEEEEecccccEEEEeEEeeecC---CceeeeecCCCCCCCCCCcccccc-CCceEEeCC
Q 013597          195 PLSVRTKVR---VVKEITFLEACIENHTKSNLYMDQVEFEPSQ---NWSATMLKADGPHSDYNAQSREIF-KPPVLIRSG  267 (439)
Q Consensus       195 Pl~VktK~~---~~~~~~~LEaqiqN~s~~~l~le~v~Lep~~---~~~~~~ln~~~~~~~~~~~~~~~~-~~~~l~~~~  267 (439)
                      ++.++-|..   .+++++-|.+.+.|.|+..-   .+.+....   -|+-..          .   ..+. ..-.+.++|
T Consensus       481 ~v~~~~~~~~~~~~G~df~v~l~~~N~s~~~~---~v~~~l~a~~v~YtG~~----------~---~~~~~~~~~v~L~p  544 (692)
T 1vjj_A          481 SIIGKLKVAGMLAVGKEVNLVLLLKNLSRDTK---TVTVNMTAWTIIYNGTL----------V---HEVWKDSATMSLDP  544 (692)
T ss_dssp             SEEEEEEECSCCBTTSCEEEEEEEEECSSSCE---EEEEEEEEEEECTTCCE----------E---EEEEEEEEEEEECT
T ss_pred             CeEEEEEcCCCCCCCCCEEEEEEEEECCCCCE---EEEEEEEEEEEeeCCcc----------c---cceEEeeEEEEECC
Confidence            344544432   24678999999999998763   23332111   111110          0   0011 112345677


Q ss_pred             CCeeeEEEEEeecCCCCCCCccccCceeeEEE-EEEEEcCCCCCceeeEEEEeeecCccCCeEEEEEecCceeEeCCcEE
Q 013597          268 GGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKL-QITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFL  346 (439)
Q Consensus       268 gd~~q~lf~l~~~~~~~~~~~~~~g~~~lGkL-~I~WRs~~Ge~G~LqTs~l~~~~p~~~dl~l~v~~~P~~v~l~~pF~  346 (439)
                      ++....-..|....-..  ....+...   ++ -+..-...++  .+.---+.   ....+|.|   ++|...++++|+.
T Consensus       545 ~~~~~i~~~i~y~~Y~~--~L~d~~~i---~~~a~~~v~et~~--~~~~~di~---l~~P~l~I---~v~g~~~v~~~l~  611 (692)
T 1vjj_A          545 EEEAEHPIKISYAQYER--YLKSDNMI---RITAVCKVPDESE--VVVERDII---LDNPTLTL---EVLNEARVRKPVN  611 (692)
T ss_dssp             TCEEEEEEEECHHHHHT--TCCTTCEE---EEEEEEECTTSCC--EEEEEEEE---CBCCCEEE---EECSCCBTTSCEE
T ss_pred             CceEEEEEEECHHHHhh--hcccCCeE---EEEEEEEECCCce--EEEEEEEE---EcCCCEEE---EeCCCcccCCeEE
Confidence            77777766666653211  11111111   22 2233333333  22212222   23334544   4667778999999


Q ss_pred             EEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEecccceeecccCCCCeeEEEEEEEecccceEEeC
Q 013597          347 LKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRIT  413 (439)
Q Consensus       347 v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l~pl~~Glq~is  413 (439)
                      +++.++|--+.++....+.++...       +..+...+.++.|.||++..+.+.+.|..+|.++|-
T Consensus       612 v~v~f~NPL~~~L~~c~~~vEG~G-------L~~~~~~~~~~~v~pg~~~~~~~~~~P~~~G~r~L~  671 (692)
T 1vjj_A          612 VQMLFSNPLDEPVRDCVLMVEGSG-------LLLGNLKIDVPTLGPKERSRVRFDILPSRSGTKQLL  671 (692)
T ss_dssp             EEEEEECCSSSCBCSEEEEEECTT-------TSSSCEEEEECCBCTTCEEEEEEEECCCSCEEEEEE
T ss_pred             EEEEEECCCCCcccceEEEEECCC-------CCCCceEEEcCccCCCCEEEEEEEEEeccccceEEE
Confidence            999999997777776888887764       123555667899999999999999999999999974

>3hrz_B Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_G* 3hs0_B*

Probab=95.82  E-value=0.052  Score=51.70  Aligned_cols=86  Identities=13%  Similarity=0.174  Sum_probs=66.3

Q ss_pred             ecCccCCeEEEEEecCceeEeCCcEEEEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEeccc---ceeecccCCCCeeE
Q 013597          321 TTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLR---IMALAPVEAFGSTD  397 (439)
Q Consensus       321 ~~p~~~dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s---~~~Lg~L~P~~s~~  397 (439)
                      .....+++-+.+ ++|-.++-++-|.+.+.|.|+.+..+. +.+.|..++     ++...+..   ..+--.|.++++..
T Consensus        75 ~i~v~kpffv~~-~LP~sv~rGE~~~l~~~V~Ny~~~~~~-v~V~l~~~~-----~~~~~~~~~~~~~~~v~v~a~~~~~  147 (252)
T 3hrz_B           75 EIRVMKVFFIDL-QMPYSVVKNEQVEIRAILHNYVNEDIY-VRVELLYNP-----AFCSASTKGQRYRQQFPIKALSSRA  147 (252)
T ss_dssp             EEEBCCSEEEEE-CCCSCEETTCCEEEEEEEEECSSSCEE-EEEEECCCT-----TEEESCCSSCCEEEEEEECTTEEEE
T ss_pred             eEEEECCEEEEc-CCCcEEeeCCEEEEEEEEEcccCceEE-EEEEEEcCC-----ceEeecCCCCceEEEEEECCCCeEE
Confidence            345566775554 899999999999999999999998887 778887653     56665432   11222689999999


Q ss_pred             EEEEEEecccceEEeC
Q 013597          398 FHLNLIATKLGVQRIT  413 (439)
Q Consensus       398 ~~L~l~pl~~Glq~is  413 (439)
                      +.|.+.|...|.+.|.
T Consensus       148 v~f~i~p~~~G~~~i~  163 (252)
T 3hrz_B          148 VPFVIVPLEQGLHDVE  163 (252)
T ss_dssp             EEEEEEECSSEEEEEE
T ss_pred             EEEEEEeccCCcEEEE
Confidence            9999999999988764

>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A

Probab=94.01  E-value=0.49  Score=40.32  Aligned_cols=81  Identities=15%  Similarity=0.206  Sum_probs=60.8

Q ss_pred             CccCCeEEEEEecCceeEeCCcEEEEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEecccceeecccCCCCeeEEEEEE
Q 013597          323 ITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNL  402 (439)
Q Consensus       323 p~~~dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l  402 (439)
                      ....||.+.+ ..|+.+..+++.+++++|+|.-......+.|.+--+.      - ..+..  .. .|.||++.++.++.
T Consensus        14 ~~~pDL~V~i-s~P~~v~~G~~~ti~vtV~N~G~~~a~~~~V~lyvng------~-~v~t~--~v-~La~G~s~tv~f~~   82 (127)
T 3idu_A           14 FEFPDLTVEI-KGPDVVGVNKLAEYEVHVKNLGGIGVPSTKVRVYING------T-LYKNW--TV-SLGPKEEKVLTFNW   82 (127)
T ss_dssp             CSSCCEEEEE-ESCSEECTTCCEEEEEEEEECSSSCEEEEEEEEEETT------E-EEEEE--EE-EECTTCEEEEEEEE
T ss_pred             ccCCCeEEEe-cCCCcccCCCEEEEEEEEEECCCCccCCcEEEEEECC------E-EEeeE--Ee-ccCCCCeEEEEEEE
Confidence            5577887755 5799999999999999999996655555777765543      1 22322  23 38999999999999


Q ss_pred             EecccceEEeCc
Q 013597          403 IATKLGVQRITG  414 (439)
Q Consensus       403 ~pl~~Glq~isg  414 (439)
                      -|...|-+.|..
T Consensus        83 ~~~~~G~~~v~A   94 (127)
T 3idu_A           83 TPTQEGMYRINA   94 (127)
T ss_dssp             CCSSCEEEEEEE
T ss_pred             EcCCCcEEEEEE
Confidence            998888777654

>1g0d_A Protein-glutamine gamma-glutamyltransferase; tissue transglutaminase,acyltransferase; 2.50A {Pagrus major} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4

Probab=93.34  E-value=0.16  Score=54.71  Aligned_cols=186  Identities=12%  Similarity=0.098  Sum_probs=105.7

Q ss_pred             CeEEEEEEE--EeCCceEEEEEEEecccccEEEEeEEeeecCCceeeeecCCCCCCCCCCcccccc-CCceEEeCCCCee
Q 013597          195 PLSVRTKVR--VVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKADGPHSDYNAQSREIF-KPPVLIRSGGGIH  271 (439)
Q Consensus       195 Pl~VktK~~--~~~~~~~LEaqiqN~s~~~l~le~v~Lep~~~~~~~~ln~~~~~~~~~~~~~~~~-~~~~l~~~~gd~~  271 (439)
                      ++.++-|..  .+++++-|.+.+.|.|+..-   .+.+...    +..+--.+..   ..   .+. ..-.+.++|++..
T Consensus       472 ~v~~~i~~~~~~~G~df~v~v~~~N~s~~~~---~v~~~l~----a~~v~YtG~~---~~---~~~~~~~~~~L~p~~~~  538 (695)
T 1g0d_A          472 RLQLSIKHAQPVFGTDFDVIVEVKNEGGRDA---HAQLTML----AMAVTYNSLR---RG---ECQRKTISVTVPAHKAH  538 (695)
T ss_dssp             CEEEEEEECCCBTTCCEEEEEEEEECSSSCE---EEEEEEE----EEEECTTCBC---CC---CCCEEEEEEEECTTEEE
T ss_pred             CeEEEEEeCCCCCCCCEEEEEEEEECCCCCE---EEEEEEE----EEEEeeCCcc---cC---ceeEeeEEEEECCCceE
Confidence            445554431  15778999999999998763   2333211    1111000000   00   011 1123456777777


Q ss_pred             eEEEEEeecCCCCCCCccccCceeeEEEEEEEEcCCCCCceeeEEEEeee-cCccCCeEEEEEecCceeEeCCcEEEEEE
Q 013597          272 NYLYQLKMLSHGSSSPVKVQGSNVLGKLQITWRTNLGEPGRLQTQQILGT-TITSKEIELNVVEVPSVVGIDKPFLLKLK  350 (439)
Q Consensus       272 q~lf~l~~~~~~~~~~~~~~g~~~lGkL~I~WRs~~Ge~G~LqTs~l~~~-~p~~~dl~l~v~~~P~~v~l~~pF~v~~~  350 (439)
                      ..-..|....-.. + ...+...   ++...  ..-.|.+.--..  ++. .....+|.|   ++|...++++|+.+++.
T Consensus       539 ~v~~~i~y~~Y~~-~-L~d~~~i---~~~a~--~~v~et~~~~~~--~~di~l~~P~l~I---~v~g~~~v~~~l~a~vs  606 (695)
T 1g0d_A          539 KEVMRLHYDDYVR-C-VSEHHLI---RVKAL--LDAPGENGPIMT--VANIPLSTPELLV---QVPGKAVVWEPLTAYVS  606 (695)
T ss_dssp             EEEEEECHHHHTT-T-CCTTCEE---EEEEE--EECCC---EEEE--EEEEECBCCCCEE---ECCSCEETTCCEEEEEE
T ss_pred             EEEEEECHHHHhh-h-cccCCeE---EEEEE--EEECCCCeEEEE--EEEEEEcCCCEEE---EeCCCcccCCeEEEEEE
Confidence            7766666653321 1 1111111   11100  111122221111  111 233444544   57888899999999999


Q ss_pred             EEeCCCCCcccEEEEEEeCCCCCcceEEEecccceee-cccCCCCeeEEEEEEEecccceEEeC
Q 013597          351 LTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMAL-APVEAFGSTDFHLNLIATKLGVQRIT  413 (439)
Q Consensus       351 v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~L-g~L~P~~s~~~~L~l~pl~~Glq~is  413 (439)
                      ++|--..++....+.++...      + ..+ ....+ +.|.||++..+.+.+.|..+|.++|-
T Consensus       607 f~NPL~~~L~~c~~~vEG~G------L-~~~-~~~~~~~~v~Pg~~~~~~~~~~P~~~G~r~L~  662 (695)
T 1g0d_A          607 FTNPLPVPLKGGVFTLEGAG------L-LSA-TQIHVNGAVAPSGKVSVKLSFSPMRTGVRKLL  662 (695)
T ss_dssp             EECCSSSCEESCEEEEEETT------T-EEE-EEEECSSEECTTCEEEEEEEECCSSCEEEEEE
T ss_pred             EECCCCCcccceEEEEECCC------C-Ccc-eEEecCCCcCCCCEEEEEEEEEcCCccceEEE
Confidence            99997777766888888764      2 233 45667 89999999999999999999999974

>2q3z_A Transglutaminase 2; transglutaminase 2, tissue transglutaminase, TG2, transferas; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1kv3_A 3ly6_A*

Probab=92.69  E-value=0.16  Score=54.94  Aligned_cols=174  Identities=9%  Similarity=0.041  Sum_probs=101.3

Q ss_pred             eCCceEEEEEEEecccccEEEEeEEeeecC---CceeeeecCCCCCCCCCCccccc-c-CCceEEeCCCCeeeEEEEEee
Q 013597          205 VKEITFLEACIENHTKSNLYMDQVEFEPSQ---NWSATMLKADGPHSDYNAQSREI-F-KPPVLIRSGGGIHNYLYQLKM  279 (439)
Q Consensus       205 ~~~~~~LEaqiqN~s~~~l~le~v~Lep~~---~~~~~~ln~~~~~~~~~~~~~~~-~-~~~~l~~~~gd~~q~lf~l~~  279 (439)
                      +++++-|.+.+.|.|+..-   .+.+....   -|+-..          .   ..+ + ..-.+-++|++....-..|..
T Consensus       485 ~G~df~v~v~~~N~s~~~~---~v~~~l~a~~v~YtG~~----------~---~~~~~~~~~~~~l~p~~~~~v~~~i~y  548 (687)
T 2q3z_A          485 MGSDFDVFAHITNNTAEEY---VCRLLLCARTVSYNGIL----------G---PECGTKYLLNLTLEPFSEKSVPLCILY  548 (687)
T ss_dssp             TTCCEEEEEEEEECSSSCE---EEEEEEEEEEECTTCCE----------E---EEEEEEEEEEEEECTTEEEEEEEEECH
T ss_pred             CCCCEEEEEEEEECCCCCE---EEEEEEEEEEEeeCCcc----------c---ceEeeeeeeEEEECCCceEEEEEEECH
Confidence            3678999999999997763   23332111   111110          0   011 1 111345667777777666666


Q ss_pred             cCCCCCCCccccCceeeEEEEEEEEcCCCCCceeeEEEEeee-cCccCCeEEEEEecCceeEeCCcEEEEEEEEeCCCCC
Q 013597          280 LSHGSSSPVKVQGSNVLGKLQITWRTNLGEPGRLQTQQILGT-TITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKE  358 (439)
Q Consensus       280 ~~~~~~~~~~~~g~~~lGkL~I~WRs~~Ge~G~LqTs~l~~~-~p~~~dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~  358 (439)
                      ..-..  ....+....+  .-+.+-.   |.+.--..  ++. .....+|.|.   +|...++++|+.+++.++|--+.+
T Consensus       549 ~~Y~~--~L~d~~~i~~--~a~~~v~---et~~~~~~--~~di~l~~P~l~I~---v~g~~~v~~~~~v~v~f~NPL~~~  616 (687)
T 2q3z_A          549 EKYRD--CLTESNLIKV--RALLVEP---VINSYLLA--ERDLYLENPEIKIR---ILGEPKQKRKLVAEVSLQNPLPVA  616 (687)
T ss_dssp             HHHTT--TCCTTCEEEE--EEEEEET---TTTEEEEE--EEEEECBCCCCEEE---EESCCSSSSCEEEEEEEECCSSSC
T ss_pred             HHHhh--hccCCCEEEE--EEEEEEC---CCCeEEEE--EEEEEEeCCCEEEE---eCCCcccCCeEEEEEEEECCCCCc
Confidence            54321  1111111111  1222222   22221111  111 2334455554   455667899999999999997777


Q ss_pred             cccEEEEEEeCCCCCcceEEEecccceee-cccCCCCeeEEEEEEEecccceEEeC
Q 013597          359 QGPFEIWLSQNDSDEEKVVMINGLRIMAL-APVEAFGSTDFHLNLIATKLGVQRIT  413 (439)
Q Consensus       359 ~~~l~l~l~~~~~~~~~~~~~~G~s~~~L-g~L~P~~s~~~~L~l~pl~~Glq~is  413 (439)
                      +..-.+.++...       +..+...+.+ +.|.||++..+.+.+.|..+|.++|-
T Consensus       617 L~~c~~~vEG~G-------L~~~~~~~~~~~~v~pg~~~~~~~~~~P~~~G~~~L~  665 (687)
T 2q3z_A          617 LEGCTFTVEGAG-------LTEEQKTVEIPDPVEAGEEVKVRMDLVPLHMGLHKLV  665 (687)
T ss_dssp             BCSEEEEEECTT-------TCSSCEEEEECSCBCTTCEEEEEEEECCCSSSCEEEE
T ss_pred             ccceEEEEECCC-------CCCCceEEecCCCcCCCCEEEEEEEEEeccccceEEE
Confidence            776888887764       1233345567 89999999999999999999999974

>3es6_B Prolactin-inducible protein; major histocompatibility complex, protein-protein complex, P inducible protein, zinc 2-glycoprotein, ZAG-PIP complex; HET: NDG NAG BMA MAN P6G; 3.23A {Homo sapiens} SCOP: b.1.18.23

Probab=90.02  E-value=0.76  Score=38.66  Aligned_cols=72  Identities=10%  Similarity=0.025  Sum_probs=52.9

Q ss_pred             ecCceeEeCCcEEEEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEecccceeecccCCCCeeEEEEEEEecccceEEeC
Q 013597          334 EVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRIT  413 (439)
Q Consensus       334 ~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l~pl~~Glq~is  413 (439)
                      ++|-++.-++-|.++..|.|+-+..|. +.+.|..+.     .|......... .-|-++...+|.|.+.|+  |-..|.
T Consensus        13 ~lPysv~rgE~~~~~~~V~nyl~~~~~-v~v~L~~s~-----~~~~~~~~~~t-~Clc~~~~~t~~W~i~~l--g~vniT   83 (118)
T 3es6_B           13 DIPKSVRPNDEVTAVLAVQTELKECMV-VKTYLISSI-----PLQGAFNYKYT-ACLCDDNPKTFYWDFYTN--RTVQIA   83 (118)
T ss_dssp             CCCSEECSSCCEEEEEEEEECCSSCEE-EEEEEEESS-----CCCSGGGCEEE-EEECSSSCEEEEEEECCS--SCEEEE
T ss_pred             eCCceEecCCEEEEEEEEEecccceEE-EEEEecCCc-----CEEccCCCccc-EEecCCCceEEEEEEEeC--CeEEEE
Confidence            789999999999999999999888888 888887764     22111111111 147889999999999885  655544


Q ss_pred             c
Q 013597          414 G  414 (439)
Q Consensus       414 g  414 (439)
                      .
T Consensus        84 v   84 (118)
T 3es6_B           84 A   84 (118)
T ss_dssp             E
T ss_pred             E
Confidence            3

>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}

Probab=89.54  E-value=12  Score=34.21  Aligned_cols=128  Identities=13%  Similarity=0.095  Sum_probs=82.2

Q ss_pred             cccceeecceEEEEEEEEcCCCcceEEEEEEEEEeCCCeeEeccCCCCCCccccCCCCeeeEEEEEEcccc---CceEEE
Q 013597           93 AFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKEL---GAHTLV  169 (439)
Q Consensus        93 sfG~iylGEtFs~~i~v~N~s~~~v~~V~ikaelqT~s~r~~L~~~~~~~~~~L~pg~~ld~iv~~~lke~---G~h~L~  169 (439)
                      .||.+-.|+.=...+.+.|..+.+++=..++    .++- ... .   .....|+||++-+..+.|+-+..   |.+.=.
T Consensus        11 dFg~v~~g~~~~~~~~i~N~g~~pl~i~~~~----~p~~-~~~-~---~~~~~I~PG~~g~I~vt~~~~~~~~~G~~~~~   81 (220)
T 2qsv_A           11 LFPISMPEDEGVVRLVVNNTDESDLQVAVVS----LPSF-VSL-D---DRAFRLQAREPRELNLSLAVPRNMPPGMKDEP   81 (220)
T ss_dssp             ECCSBCTTCCCEEEEEEEECSSSCEEEEEEE----CCTT-EEC-S---CCEEEECSSSCEEEEEEECCCTTCCSEEEEEE
T ss_pred             EcccccCCCcceEEEEEEeCCCCceEEEecc----CCCc-eEe-e---eCcceeCCCCceEEEEEEcchhcccCCceeeE
Confidence            6999999999999999999999987655443    2221 111 1   12357999999999999999886   655555


Q ss_pred             EEEEEEcC-CCceeeeceEEEEEeec-----------CeEEE--EEEEEe-CCceEEEEEEEecccccEEEEeEE
Q 013597          170 CTALYSDG-EGERKYLPQFFKFIVSN-----------PLSVR--TKVRVV-KEITFLEACIENHTKSNLYMDQVE  229 (439)
Q Consensus       170 c~VsY~~~-~Ge~~~frK~fkF~v~~-----------Pl~Vk--tK~~~~-~~~~~LEaqiqN~s~~~l~le~v~  229 (439)
                      ++|...++ +++...-+=..+-.+..           -+.+.  ..|..+ ++..--+..+.|++..||.|.++.
T Consensus        82 i~v~~~~~~~~~~~~~~i~v~g~v~p~~~~~~~~~~~~i~~~~~~dfG~i~g~~~~~~f~i~N~G~~pL~I~~v~  156 (220)
T 2qsv_A           82 LVLEVTSPETGKKAVDSVMVSLPLVDNFPALTAAQTGVMELSTYLDMGQLDGETTKAAIEIRNVGAGPLRLHSVT  156 (220)
T ss_dssp             EEEEEECTTTCCEEEEEEEEEEEECCCGGGCCGGGCCCEECCCEEEEEECTTSCEEEEEEEEECSSSCEEEEEEE
T ss_pred             EEEEEEcCCCCcccccEEEEEEEEcccchhhhhccCCEEEEEeEEeeeccCCCeEEEEEEEEECCCCCEEEEEEE
Confidence            66666542 22211111112222221           13333  123333 355667899999999999999885

>4fxk_B Complement C4-A alpha chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_B*

Probab=89.41  E-value=0.52  Score=51.56  Aligned_cols=83  Identities=17%  Similarity=0.166  Sum_probs=64.7

Q ss_pred             CccCCeEEEEEecCceeEeCCcEEEEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEeccc--ceeecccCCCCeeEEEE
Q 013597          323 ITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLR--IMALAPVEAFGSTDFHL  400 (439)
Q Consensus       323 p~~~dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s--~~~Lg~L~P~~s~~~~L  400 (439)
                      ...+++-+. .++|-+++.++-|.+.+.|.|+++..+. +.|.|+..+     ++...+..  ...+ .|+++++..+.|
T Consensus       149 ~v~kpf~v~-~~lP~~v~~GD~~~i~~~V~N~~~~~~~-v~v~l~~~~-----~~~~~~~~~~~~~~-~v~a~~~~~v~f  220 (767)
T 4fxk_B          149 RVFREFHLH-LRLPMSVRRFEQLELRPVLYNYLDKNLT-VSVHVSPVE-----GLCLAGGGGLAQQV-LVPAGSARPVAF  220 (767)
T ss_dssp             ECCCSEEEE-CCCCSCEETTCEEEECCEEEECSSSCEE-EEEEECCCT-----TEECSSSSCCCEEE-EECSSCEEECCE
T ss_pred             EEeccEEEe-cCCCCeeccCCEEEEEEEEEECCCCCEE-EEEEEEecC-----CeEEecCCceeEEE-EEcCCCeEEEEE
Confidence            345566443 3899999999999999999999998887 888887654     55554432  2333 589999999999


Q ss_pred             EEEecccceEEeC
Q 013597          401 NLIATKLGVQRIT  413 (439)
Q Consensus       401 ~l~pl~~Glq~is  413 (439)
                      .+.|...|.+.|.
T Consensus       221 ~i~~~~~G~~~i~  233 (767)
T 4fxk_B          221 SVVPTAAAAVSLK  233 (767)
T ss_dssp             EEEECSCSEEEEE
T ss_pred             EEEECccCcEEEE
Confidence            9999999998874

>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=88.97  E-value=2.2  Score=35.35  Aligned_cols=86  Identities=15%  Similarity=0.244  Sum_probs=64.7

Q ss_pred             CCccCCCccccccc--cccceeecceEEEEEEEEcCCCcceEEEEEEEEEeCCCeeEeccCCCCCCccccCCCCeeeEEE
Q 013597           79 ADSIGLSGLLVLPQ--AFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIV  156 (439)
Q Consensus        79 ~~~~~~~~~L~LP~--sfG~iylGEtFs~~i~v~N~s~~~v~~V~ikaelqT~s~r~~L~~~~~~~~~~L~pg~~ld~iv  156 (439)
                      ..+.+.-+.|.+|+  .||..-+|++=...|.+.|.+..+++   ++  +..++ .+....    ..+.|.||+..+..|
T Consensus        17 l~a~~~~~~l~~p~~l~fg~~~v~~~~~~~~~l~N~g~~~~~---f~--~~~~~-~F~i~P----~~g~L~pg~~~~i~V   86 (122)
T 2ys4_A           17 IKARGARAILDFPDKLNFSTCPVKYSTQKILLVRNIGNKNAV---FH--IKTCR-PFSIEP----AIGTLNVGESMQLEV   86 (122)
T ss_dssp             SCCCSCCCCCCCCSEECCCSEESSSCEEEEEEEECCSSSCEE---EE--EECCT-TEEEES----SEEEECTTCEEEEEE
T ss_pred             EEEEcCCcEECCCCeeecCCeecCCeEEEEEEEEECCCCCEE---EE--EecCC-CeEEEC----CcCEECCCCEEEEEE
Confidence            44556667788885  89999999999999999999887654   22  33322 333322    246899999999999


Q ss_pred             EEEccccCceEEEEEEEE
Q 013597          157 EHDVKELGAHTLVCTALY  174 (439)
Q Consensus       157 ~~~lke~G~h~L~c~VsY  174 (439)
                      .|.=++.|.|.-...+.|
T Consensus        87 ~F~P~~~g~~~~~l~v~~  104 (122)
T 2ys4_A           87 EFEPQSVGDHSGRLIVCY  104 (122)
T ss_dssp             EECCSSSBCCCCBCEEEE
T ss_pred             EEEcCCCccEEEEEEEEE
Confidence            999999999976666666

>4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens}

Probab=88.97  E-value=2.7  Score=49.43  Aligned_cols=84  Identities=15%  Similarity=0.105  Sum_probs=65.1

Q ss_pred             cCccCCeEEEEEecCceeEeCCcEEEEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEeccc--ceeecccCCCCeeEEE
Q 013597          322 TITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLR--IMALAPVEAFGSTDFH  399 (439)
Q Consensus       322 ~p~~~dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s--~~~Lg~L~P~~s~~~~  399 (439)
                      ....+++-+. .++|-.+.-++-|.+.+.|.|+.+..+. +.|.|..++     ++.+.+..  ...+ .|.++++..+.
T Consensus       763 v~v~kpf~v~-~~LP~sv~rGE~~~l~~~V~N~~~~~~~-v~V~l~~~~-----~~~~~~~~~~~~~v-~l~~~~~~~v~  834 (1451)
T 4acq_A          763 LRAFQPFFVE-LTMPYSVIRGEAFTLKATVLNYLPKCIR-VSVQLEASP-----AFLAVPVEKEQAPH-CICANGRQTVS  834 (1451)
T ss_dssp             ECCBCSEEEE-EECCSEEESSSCEEEEEEEEECSSSCEE-EEEEECCCT-----TEEEEESCSCCCCE-EECTTEEEEEE
T ss_pred             EEEECCEEEE-ccCCceEecCCEEEEEEEEEeccCccEE-EEEEEEcCC-----CeEeecCCCCceEE-EECCCCeEEEE
Confidence            4455666444 3899999999999999999999998877 777776653     56665432  2333 57999999999


Q ss_pred             EEEEecccceEEeC
Q 013597          400 LNLIATKLGVQRIT  413 (439)
Q Consensus       400 L~l~pl~~Glq~is  413 (439)
                      |.+.|...|.+.|.
T Consensus       835 f~v~p~~~G~~~i~  848 (1451)
T 4acq_A          835 WAVTPKSLGNVNFT  848 (1451)
T ss_dssp             EEEEECSCEEEEEE
T ss_pred             EEEEECccceEEEE
Confidence            99999999987764

>2hr0_B Complement C3 alpha' chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2icf_B* 2wii_B* 2win_B* 3g6j_B 3l5n_B* 2a73_B* 2i07_B* 2xwj_B* 2xwb_B* 2a74_C* 2ice_C* 2qki_C* 3l3o_F* 3nms_C* 3nsa_C* 3ohx_C* 3t4a_C 2ice_B* 3l3o_B* 3nms_B* ...

Probab=88.61  E-value=1.3  Score=49.43  Aligned_cols=83  Identities=13%  Similarity=0.163  Sum_probs=63.8

Q ss_pred             CccCCeEEEEEecCceeEeCCcEEEEEEEEeCCC-CCcccEEEEEEeCCCCCcceEEEecc----cceeecccCCCCeeE
Q 013597          323 ITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTD-KEQGPFEIWLSQNDSDEEKVVMINGL----RIMALAPVEAFGSTD  397 (439)
Q Consensus       323 p~~~dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~-r~~~~l~l~l~~~~~~~~~~~~~~G~----s~~~Lg~L~P~~s~~  397 (439)
                      ...+++-+. .++|-+++.++-|.+.+.|.|+++ ..+. +.|.|..++     ++...|.    ....+ .|.++++..
T Consensus        76 ~v~kp~~v~-~~LP~~v~~GD~~~i~~~v~N~~~~~~~~-v~v~l~~~~-----~~~~~~~~~~~~~~~v-~l~~~~~~~  147 (915)
T 2hr0_B           76 TVMQDFFID-LRLPYSVVRNEQVEIRAVLYNYRQNQELK-VRVELLHNP-----AFCSLATTKRRHQQTV-TIPPKSSLS  147 (915)
T ss_dssp             EECCSSEEE-EECCSEEETTCCEEEEEEEEECCSSCCEE-EEEEECCCT-----TEECSCCSSSCEEEEE-EECTTEEEE
T ss_pred             EEeccEEEE-ccCCCEEecCcEEEEEEEEEcCCCCeeEE-EEEEEecCC-----ceEeecCCCCcceeEE-EECCCCeEE
Confidence            345555443 389999999999999999999999 8877 777776643     4655542    12334 679999999


Q ss_pred             EEEEEEecccceEEeC
Q 013597          398 FHLNLIATKLGVQRIT  413 (439)
Q Consensus       398 ~~L~l~pl~~Glq~is  413 (439)
                      +.|.+.|...|.+.|.
T Consensus       148 v~f~i~~~~~G~~~i~  163 (915)
T 2hr0_B          148 VPYVIVPLKTGLQEVE  163 (915)
T ss_dssp             EEEEEEECSCEEEEEE
T ss_pred             EEEEEEECccceEEEE
Confidence            9999999999988763

>3prx_B Cobra venom factor; immune system, complement, immune SYS complex; HET: NAG; 4.30A {Naja kaouthia} PDB: 3pvm_B*

Probab=88.34  E-value=2.1  Score=51.02  Aligned_cols=73  Identities=14%  Similarity=0.204  Sum_probs=59.7

Q ss_pred             ecCceeEeCCcEEEEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEecc----cceeecccCCCCeeEEEEEEEecccce
Q 013597          334 EVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGL----RIMALAPVEAFGSTDFHLNLIATKLGV  409 (439)
Q Consensus       334 ~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~----s~~~Lg~L~P~~s~~~~L~l~pl~~Gl  409 (439)
                      ++|-.+.-++-|.+.+.|.|+.+..+. +.|.|..++     ++...+.    ....+ .|.++++..+.|.+.|...|.
T Consensus       819 ~LPysv~rGEq~~l~v~VfNy~~~~~~-V~V~L~~s~-----~~~~~~~~~~~~~q~v-~v~a~~~~~v~f~i~p~~~G~  891 (1642)
T 3prx_B          819 QMPYSVVKNEQVEIRAILHNYVNEDIY-VRVELLYNP-----AFCSASTKGQRYRQQF-PIKALSSRAVPFVIVPLEQGL  891 (1642)
T ss_dssp             CCCSCEETTCCEEEEEEEEECSSSCEE-EEEEECCCT-----TEEESCCSSSCCEEEE-EECSSEEEEEEEEEEECSCEE
T ss_pred             cCCCEEecCCEEEEEEEEEcCCCCcEE-EEEEEEcCC-----CeEeeccCCCcceeEE-EECCCCeEEEEEEEEEeeccc
Confidence            789999999999999999999998877 778887653     5666552    12333 689999999999999999998


Q ss_pred             EEeC
Q 013597          410 QRIT  413 (439)
Q Consensus       410 q~is  413 (439)
                      +.|.
T Consensus       892 ~~i~  895 (1642)
T 3prx_B          892 HDVE  895 (1642)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            8753

>2b39_A C3; thioester, immune defense, immune system; HET: NAG BMA; 3.00A {Bos taurus}

Probab=86.62  E-value=2.2  Score=50.86  Aligned_cols=73  Identities=14%  Similarity=0.165  Sum_probs=59.0

Q ss_pred             ecCceeEeCCcEEEEEEEEeCCC-CCcccEEEEEEeCCCCCcceEEEecc----cceeecccCCCCeeEEEEEEEecccc
Q 013597          334 EVPSVVGIDKPFLLKLKLTNQTD-KEQGPFEIWLSQNDSDEEKVVMINGL----RIMALAPVEAFGSTDFHLNLIATKLG  408 (439)
Q Consensus       334 ~~P~~v~l~~pF~v~~~v~N~s~-r~~~~l~l~l~~~~~~~~~~~~~~G~----s~~~Lg~L~P~~s~~~~L~l~pl~~G  408 (439)
                      ++|-+++.++-|.+.+.|.|+++ ..+. +.+.|...+     ++...+.    ....+ .|.++++..+.|.+.|...|
T Consensus       833 ~LP~sv~~GD~~~i~~~V~N~~~~~~~~-v~v~l~~~~-----~~~~~~~~~~~~~~~v-~v~a~~~~~v~f~i~p~~~G  905 (1661)
T 2b39_A          833 RLPYSVVRNEQVEIRAILYNYREAENLK-VRVELLYNP-----AFCSLATAKKRHQQTI-TIPARSSVAVPYVIVPLKIG  905 (1661)
T ss_dssp             ECCSCEESSCEEEEEEEEEECCTTCCEE-EEEEECCCT-----TEECSSCSSCCCEEEE-EECTTCEEEEEEEEEECSCE
T ss_pred             cCCcEEEeCCEEEEEEEEEcCCCCccEE-EEEEEcCCC-----CeEeecCCCCcceEEE-EECCCCcEEEEEEEEEcccC
Confidence            88999999999999999999999 8877 777776653     4555443    22334 68999999999999999999


Q ss_pred             eEEeC
Q 013597          409 VQRIT  413 (439)
Q Consensus       409 lq~is  413 (439)
                      .+.|.
T Consensus       906 ~~~i~  910 (1661)
T 2b39_A          906 LHEVE  910 (1661)
T ss_dssp             EEEEE
T ss_pred             eEEEE
Confidence            88763

>2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae}

Probab=86.09  E-value=2.8  Score=48.74  Aligned_cols=73  Identities=16%  Similarity=0.156  Sum_probs=58.9

Q ss_pred             ecCceeEeCCcEEEEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEeccc------ceeecccCCCCeeEEEEEEEeccc
Q 013597          334 EVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLR------IMALAPVEAFGSTDFHLNLIATKL  407 (439)
Q Consensus       334 ~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s------~~~Lg~L~P~~s~~~~L~l~pl~~  407 (439)
                      ++|-+++.++-|.+.+.|.|+++..+. +.+.|...+    +++-++|..      ...+ .|.++++..+.|.+.|...
T Consensus       671 ~lP~~v~~Gd~~~l~~~v~N~~~~~~~-v~v~l~~~~----~~~~~~~~~~~~~~~~~~v-~v~~~~~~~v~f~i~~~~~  744 (1325)
T 2pn5_A          671 NLPYSIKRGEAVVLQFTLFNNLGAEYI-ADVTLYNVA----NQTEFVGRPNTDLSYTKSV-SVPPKVGVPISFLIKARKL  744 (1325)
T ss_dssp             ECCSEEETTCEEEEEEEEEECSSSCEE-EEEEEECGG----GCEEETTSCTTCCEEEEEE-EECTTCCEEEEEEEEECSS
T ss_pred             CCCcEEEcCCEEEEEEEEEeCCCCcEE-EEEEEeecC----CceEEeccCCCCCcceEEE-EECCCCeEEEEEEEEEccc
Confidence            789999999999999999999998887 888886542    246666542      2334 6799999999999999999


Q ss_pred             ceEEe
Q 013597          408 GVQRI  412 (439)
Q Consensus       408 Glq~i  412 (439)
                      |...|
T Consensus       745 G~~~i  749 (1325)
T 2pn5_A          745 GEMAV  749 (1325)
T ss_dssp             EEEEE
T ss_pred             ceEEE
Confidence            97766

>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}

Probab=85.01  E-value=2.2  Score=34.77  Aligned_cols=73  Identities=18%  Similarity=0.179  Sum_probs=58.0

Q ss_pred             cceeecceEEEEEEEEcCCCcceEEEEEEEEEeCCCeeEeccCCCCCCccccCCCCeeeEEEEEEccccCceEEEEEEE
Q 013597           95 GAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTAL  173 (439)
Q Consensus        95 G~iylGEtFs~~i~v~N~s~~~v~~V~ikaelqT~s~r~~L~~~~~~~~~~L~pg~~ld~iv~~~lke~G~h~L~c~Vs  173 (439)
                      |.+-+|+.+.+.+++.|--+.+++++.+.+|=--=......      ..+++.||+++...+.+-=+..|.+.|.+..+
T Consensus        14 g~~~v~~~l~v~vsf~NPL~~~L~~c~~~vEG~GL~~~~~~------~~~~v~pg~~~~~~~~~~P~~~G~~~L~a~f~   86 (102)
T 2xzz_A           14 GAAVVGQECEVQIVFKNPLPVTLTNVVFRLEGSGLQRPKIL------NVGDIGGNETVTLRQSFVPVRPGPRQLIASLD   86 (102)
T ss_dssp             SCCCSSSCEEEEEEEECCSSSCBCSEEEEEEETTTEEEEEE------EECCBCTTCEEEEEEEECCCSCSSCCCEEEEE
T ss_pred             CCcccCCeEEEEEEEECCCCCcccCEEEEEECCCCCcceEE------EcCcCCCCCEEEEEEEEecCcccceEEEEEEE
Confidence            66788999999999999999999999999873222222111      13468999999999999999999999987754

>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=81.69  E-value=3.2  Score=34.38  Aligned_cols=69  Identities=13%  Similarity=0.133  Sum_probs=51.7

Q ss_pred             eEeCCcEEEEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEecccceeecccCCCCeeEEEEEEEecccceEEeCceEEE
Q 013597          339 VGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRITGITVF  418 (439)
Q Consensus       339 v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l~pl~~Glq~isgI~l~  418 (439)
                      +.++..-+.++.|+|..+.... +  .+...     ..|.+.=.    -|.|+||++..+.+++.|..+|...-.=+..+
T Consensus        37 ~~v~~~~~~~~~l~N~g~~~~~-f--~~~~~-----~~F~i~P~----~g~L~pg~~~~i~V~F~P~~~g~~~~~l~v~~  104 (122)
T 2ys4_A           37 CPVKYSTQKILLVRNIGNKNAV-F--HIKTC-----RPFSIEPA----IGTLNVGESMQLEVEFEPQSVGDHSGRLIVCY  104 (122)
T ss_dssp             EESSSCEEEEEEEECCSSSCEE-E--EEECC-----TTEEEESS----EEEECTTCEEEEEEEECCSSSBCCCCBCEEEE
T ss_pred             eecCCeEEEEEEEEECCCCCEE-E--EEecC-----CCeEEECC----cCEECCCCEEEEEEEEEcCCCccEEEEEEEEE
Confidence            5788999999999999887655 4  44432     26888643    37889999999999999999998654443333


Q ss_pred             e
Q 013597          419 D  419 (439)
Q Consensus       419 D  419 (439)
                      |
T Consensus       105 ~  105 (122)
T 2ys4_A          105 D  105 (122)
T ss_dssp             S
T ss_pred             C
Confidence            4

>1vjj_A Protein-glutamine glutamyltransferase E; transglutaminase 3, X-RAY crystallography, metalloenzyme, calcium ION; HET: GDP; 1.90A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1sgx_A* 1l9m_A 1l9n_A* 1nud_A 1nuf_A 1nug_A 1rle_A*

Probab=80.61  E-value=3  Score=45.06  Aligned_cols=72  Identities=13%  Similarity=0.179  Sum_probs=53.1

Q ss_pred             cCCeEEEEEecCceeEeCCcEEEEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEecccceeec------ccCCCCeeEE
Q 013597          325 SKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALA------PVEAFGSTDF  398 (439)
Q Consensus       325 ~~dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg------~L~P~~s~~~  398 (439)
                      ..++.+.+. +++.+.++++|.+.+.++|.+++... +.+.+.-      ..+.++|.....+.      .|.|+++..+
T Consensus       479 ~~~v~~~~~-~~~~~~~G~df~v~l~~~N~s~~~~~-v~~~l~a------~~v~YtG~~~~~~~~~~~~v~L~p~~~~~i  550 (692)
T 1vjj_A          479 EPSIIGKLK-VAGMLAVGKEVNLVLLLKNLSRDTKT-VTVNMTA------WTIIYNGTLVHEVWKDSATMSLDPEEEAEH  550 (692)
T ss_dssp             CCSEEEEEE-ECSCCBTTSCEEEEEEEEECSSSCEE-EEEEEEE------EEECTTCCEEEEEEEEEEEEEECTTCEEEE
T ss_pred             CCCeEEEEE-cCCCCCCCCCEEEEEEEEECCCCCEE-EEEEEEE------EEEeeCCccccceEEeeEEEEECCCceEEE
Confidence            455666653 66778899999999999999887765 6666643      36777777554443      4789999999


Q ss_pred             EEEEEe
Q 013597          399 HLNLIA  404 (439)
Q Consensus       399 ~L~l~p  404 (439)
                      .+.+-+
T Consensus       551 ~~~i~y  556 (692)
T 1vjj_A          551 PIKISY  556 (692)
T ss_dssp             EEEECH
T ss_pred             EEEECH
Confidence            887644

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	439
d1vjja3	99	Transglutaminase, two C-terminal domains {Human (H	97.02
d1ex0a3	100	Transglutaminase, two C-terminal domains {Human (H	96.84
d1g0da3	101	Transglutaminase, two C-terminal domains {Red sea	96.82
d2q3za3	98	Transglutaminase, two C-terminal domains {Human (H	96.56
d1ex0a2	112	Transglutaminase, two C-terminal domains {Human (H	96.28
d1vjja2	115	Transglutaminase, two C-terminal domains {Human (H	96.05
d1g0da2	112	Transglutaminase, two C-terminal domains {Red sea	95.55
d2q3za2	114	Transglutaminase, two C-terminal domains {Human (H	95.32
d2q3za3	98	Transglutaminase, two C-terminal domains {Human (H	94.62
d1vjja3	99	Transglutaminase, two C-terminal domains {Human (H	94.36
d3es6b1	118	Prolactin-inducible protein, PIP {Human (Homo sapi	93.9
d1g0da3	101	Transglutaminase, two C-terminal domains {Red sea	91.94
d1ex0a3	100	Transglutaminase, two C-terminal domains {Human (H	90.58

>d1vjja3 b.1.5.1 (A:594-692) Transglutaminase, two C-terminal domains {Human (Homo sapiens), TGase E3 [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Transglutaminase, two C-terminal domains
family: Transglutaminase, two C-terminal domains
domain: Transglutaminase, two C-terminal domains
species: Human (Homo sapiens), TGase E3 [TaxId: 9606]

Probab=97.02  E-value=0.00073  Score=53.66  Aligned_cols=74  Identities=11%  Similarity=0.252  Sum_probs=60.8

Q ss_pred             ecCceeEeCCcEEEEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEecccceeecccCCCCeeEEEEEEEecccceEEeC
Q 013597          334 EVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRIT  413 (439)
Q Consensus       334 ~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l~pl~~Glq~is  413 (439)
                      ++|...++++++.++++++|--+..+.+-.+.++...       ++.+.....++.+.||++.++.+.+.|..+|.++|-
T Consensus         6 ~v~~~~~v~~~~~v~vsf~NPL~~~L~~c~f~vEG~G-------L~~~~~~~~~~~v~p~~~~~~~~~~~P~~~G~~~l~   78 (99)
T d1vjja3           6 EVLNEARVRKPVNVQMLFSNPLDEPVRDCVLMVEGSG-------LLLGNLKIDVPTLGPKERSRVRFDILPSRSGTKQLL   78 (99)
T ss_dssp             EECSCCBTTSCEEEEEEEECCSSSCBCSEEEEEECTT-------TSSSCEEEEECCBCTTCEEEEEEEECCCSCEEEEEE
T ss_pred             EeCCCcCcCCeEEEEEEEECCCCCchhCEEEEEEeCC-------CCCccEEEecCccCCCCEEEEEEEEEcCCcccEEEE
Confidence            5778889999999999999997887776888887753       122333456888999999999999999999999974


Q ss_pred             c
Q 013597          414 G  414 (439)
Q Consensus       414 g  414 (439)
                      .
T Consensus        79 a   79 (99)
T d1vjja3          79 A   79 (99)
T ss_dssp             E
T ss_pred             E
Confidence            3

>d1ex0a3 b.1.5.1 (A:628-727) Transglutaminase, two C-terminal domains {Human (Homo sapiens), blood isozyme [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Transglutaminase, two C-terminal domains
family: Transglutaminase, two C-terminal domains
domain: Transglutaminase, two C-terminal domains
species: Human (Homo sapiens), blood isozyme [TaxId: 9606]

Probab=96.84  E-value=0.0012  Score=52.47  Aligned_cols=78  Identities=10%  Similarity=0.078  Sum_probs=63.1

Q ss_pred             CCeEEEEEecCceeEeCCcEEEEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEecccceeecccCCCCeeEEEEEEEec
Q 013597          326 KEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIAT  405 (439)
Q Consensus       326 ~dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l~pl  405 (439)
                      .||.+   ++|...++++++++++.++|--+..+.+..+.++...      +.  ......++.+.||++.++.+.+.|.
T Consensus         3 P~l~I---~v~g~~~v~~~~~v~v~F~NPL~~~L~nc~~~vEG~G------L~--~~~~~~~~~v~p~~~~~~~~~~~P~   71 (100)
T d1ex0a3           3 PEIII---KVRGTQVVGSDMTVTVQFTNPLKETLRNVWVHLDGPG------VT--RPMKKMFREIRPNSTVQWEEVCRPW   71 (100)
T ss_dssp             CCCEE---EEEECCBTTSCEEEEEEEECCSSSCEEEEEEEEEETT------TE--EEEEEEEEEECTTCEEEEEEEECCS
T ss_pred             CcEEE---EeCCCcccCCeEEEEEEEECCCCCchhCEEEEEEcCC------Cc--eeeEEecCccCCCCEEEEEEEEecC
Confidence            34544   4566778999999999999998888876888888753      32  3345778999999999999999999


Q ss_pred             ccceEEeCc
Q 013597          406 KLGVQRITG  414 (439)
Q Consensus       406 ~~Glq~isg  414 (439)
                      .+|.++|-.
T Consensus        72 ~~G~~~l~a   80 (100)
T d1ex0a3          72 VSGHRKLIA   80 (100)
T ss_dssp             SCEEEEEEE
T ss_pred             CcccEEEEE
Confidence            999999743

>d1g0da3 b.1.5.1 (A:584-684) Transglutaminase, two C-terminal domains {Red sea bream (Chrysophrys major) [TaxId: 143350]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Transglutaminase, two C-terminal domains
family: Transglutaminase, two C-terminal domains
domain: Transglutaminase, two C-terminal domains
species: Red sea bream (Chrysophrys major) [TaxId: 143350]

Probab=96.82  E-value=0.0017  Score=51.63  Aligned_cols=73  Identities=16%  Similarity=0.206  Sum_probs=59.8

Q ss_pred             ecCceeEeCCcEEEEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEecccceeecccCCCCeeEEEEEEEecccceEEeC
Q 013597          334 EVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIATKLGVQRIT  413 (439)
Q Consensus       334 ~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l~pl~~Glq~is  413 (439)
                      ++|...++++++.+++.++|--+..+....+.++...      + +.+.+....+.+.||++.++.+.+.|..+|.++|-
T Consensus         7 ~v~g~~~v~~~~~v~vsf~NPL~~~L~~c~~~vEG~G------L-~~~~~~~~~~~v~p~~~~~~~~~~~P~~~G~~~L~   79 (101)
T d1g0da3           7 QVPGKAVVWEPLTAYVSFTNPLPVPLKGGVFTLEGAG------L-LSATQIHVNGAVAPSGKVSVKLSFSPMRTGVRKLL   79 (101)
T ss_dssp             ECCSCEETTCCEEEEEEEECCSSSCEESCEEEEEETT------T-EEEEEEECSSEECTTCEEEEEEEECCSSCEEEEEE
T ss_pred             EeCCCcCcCCeEEEEEEEECCCCCeecCEEEEEEcCC------C-CcccEEEecCCcCCCCEEEEEEEEEcCCcccEEEE
Confidence            5888999999999999999998888766888887754      1 22333233578999999999999999999999964

>d2q3za3 b.1.5.1 (A:586-683) Transglutaminase, two C-terminal domains {Human (Homo sapiens), tissue isozyme [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Transglutaminase, two C-terminal domains
family: Transglutaminase, two C-terminal domains
domain: Transglutaminase, two C-terminal domains
species: Human (Homo sapiens), tissue isozyme [TaxId: 9606]

Probab=96.56  E-value=0.0023  Score=50.55  Aligned_cols=74  Identities=11%  Similarity=0.184  Sum_probs=57.6

Q ss_pred             ecCceeEeCCcEEEEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEecccceee-cccCCCCeeEEEEEEEecccceEEe
Q 013597          334 EVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMAL-APVEAFGSTDFHLNLIATKLGVQRI  412 (439)
Q Consensus       334 ~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~L-g~L~P~~s~~~~L~l~pl~~Glq~i  412 (439)
                      +++...++++++.++++++|--+..+..-.++++...  .     +.+.....+ +.+.||++.++.+.+.|..+|.++|
T Consensus         7 ~v~g~~~vg~~~~v~vsF~NPL~~~L~~c~~~vEG~G--L-----~~~~~~~~~~~~v~pg~~~~~~~~~~P~~~G~~~L   79 (98)
T d2q3za3           7 RILGEPKQKRKLVAEVSLQNPLPVALEGCTFTVEGAG--L-----TEEQKTVEIPDPVEAGEEVKVRMDLVPLHMGLHKL   79 (98)
T ss_dssp             EEESCCSSSSCEEEEEEEECCSSSCBCSEEEEEECTT--T-----CSSCEEEEECSCBCTTCEEEEEEEECCCSSSCEEE
T ss_pred             EECCCcCcCCeEEEEEEEECCCCCchhCEEEEEEcCC--c-----CcCcEEEeCCCccCCCCEEEEEEEEEcCCcccEEE
Confidence            3566777999999999999997887776888887653  1     122223345 4699999999999999999999997


Q ss_pred             Cc
Q 013597          413 TG  414 (439)
Q Consensus       413 sg  414 (439)
                      -.
T Consensus        80 ~a   81 (98)
T d2q3za3          80 VV   81 (98)
T ss_dssp             EE
T ss_pred             EE
Confidence            43

>d1ex0a2 b.1.5.1 (A:516-627) Transglutaminase, two C-terminal domains {Human (Homo sapiens), blood isozyme [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Transglutaminase, two C-terminal domains
family: Transglutaminase, two C-terminal domains
domain: Transglutaminase, two C-terminal domains
species: Human (Homo sapiens), blood isozyme [TaxId: 9606]

Probab=96.28  E-value=0.0037  Score=50.39  Aligned_cols=70  Identities=16%  Similarity=0.295  Sum_probs=53.5

Q ss_pred             CeEEEEEecCceeEeCCcEEEEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEecccceeec------ccCCCCeeEEEE
Q 013597          327 EIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALA------PVEAFGSTDFHL  400 (439)
Q Consensus       327 dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg------~L~P~~s~~~~L  400 (439)
                      |+++.+ ++ +.+.+|++|.+.+.++|+|+.... +.+.+.-      .++.|+|.....++      .|.|+++..+.+
T Consensus         2 dV~~~~-~~-~~~~iG~df~v~i~~~N~s~~~~~-v~l~l~a------~~v~YtG~~~~~~~~~~~~v~L~p~~~~~v~~   72 (112)
T d1ex0a2           2 NVDMDF-EV-ENAVLGKDFKLSITFRNNSHNRYT-ITAYLSA------NITFYTGVPKAEFKKETFDVTLEPLSFKKEAV   72 (112)
T ss_dssp             CEEEEE-EE-CCCBTTCCEEEEEEEEECSSSCEE-EEEEEEE------EEECTTSCEEEEEEEEEEEEEECTTEEEEEEE
T ss_pred             ceEEEE-Ee-cCcccCCCEEEEEEEEECCCCCEE-EEEEEEE------EEEEeCCcCchheEEeeEEEEECCCCEEEEEE
Confidence            666666 35 447799999999999999887766 7777754      36778887666554      389999999999


Q ss_pred             EEEec
Q 013597          401 NLIAT  405 (439)
Q Consensus       401 ~l~pl  405 (439)
                      ++-+-
T Consensus        73 ~v~~~   77 (112)
T d1ex0a2          73 LIQAG   77 (112)
T ss_dssp             EECHH
T ss_pred             EEcHH
Confidence            87653

>d1vjja2 b.1.5.1 (A:479-593) Transglutaminase, two C-terminal domains {Human (Homo sapiens), TGase E3 [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Transglutaminase, two C-terminal domains
family: Transglutaminase, two C-terminal domains
domain: Transglutaminase, two C-terminal domains
species: Human (Homo sapiens), TGase E3 [TaxId: 9606]

Probab=96.05  E-value=0.0076  Score=48.68  Aligned_cols=72  Identities=13%  Similarity=0.189  Sum_probs=55.2

Q ss_pred             CCeEEEEEecCceeEeCCcEEEEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEecccceeecc------cCCCCeeEEE
Q 013597          326 KEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAP------VEAFGSTDFH  399 (439)
Q Consensus       326 ~dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~------L~P~~s~~~~  399 (439)
                      .|+.+.+ ++.+.+.+|++|.+.+.++|+|++... +.+.+.-      .++.|+|.....+.+      |.|+++..+.
T Consensus         2 ~~v~~~l-kl~~~~~iG~Df~v~l~~~N~s~~~~~-v~l~l~a------~av~YtG~~~~~~~~~~~~v~L~p~~~~~v~   73 (115)
T d1vjja2           2 PSIIGKL-KVAGMLAVGKEVNLVLLLKNLSRDTKT-VTVNMTA------WTIIYNGTLVHEVWKDSATMSLDPEEEAEHP   73 (115)
T ss_dssp             CSEEEEE-EECSCCBTTSCEEEEEEEEECSSSCEE-EEEEEEE------EEECTTCCEEEEEEEEEEEEEECTTCEEEEE
T ss_pred             CCeEEEE-EcCCCCCCCCCEEEEEEEEECCCCCEE-EEEEEEE------EEEEeCCcCchheEEeeEEEEECCCCeEEEE
Confidence            3455554 455788999999999999999888766 6676654      368888877666543      8999999999


Q ss_pred             EEEEec
Q 013597          400 LNLIAT  405 (439)
Q Consensus       400 L~l~pl  405 (439)
                      +.+-+-
T Consensus        74 ~~v~y~   79 (115)
T d1vjja2          74 IKISYA   79 (115)
T ss_dssp             EEECHH
T ss_pred             EEECHH
Confidence            987653

>d1g0da2 b.1.5.1 (A:472-583) Transglutaminase, two C-terminal domains {Red sea bream (Chrysophrys major) [TaxId: 143350]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Transglutaminase, two C-terminal domains
family: Transglutaminase, two C-terminal domains
domain: Transglutaminase, two C-terminal domains
species: Red sea bream (Chrysophrys major) [TaxId: 143350]

Probab=95.55  E-value=0.014  Score=46.93  Aligned_cols=68  Identities=16%  Similarity=0.188  Sum_probs=51.9

Q ss_pred             eEEEEEecCceeEeCCcEEEEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEecccceeecc------cCCCCeeEEEEE
Q 013597          328 IELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAP------VEAFGSTDFHLN  401 (439)
Q Consensus       328 l~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~------L~P~~s~~~~L~  401 (439)
                      +++++..-|..  +|+.|.+.+.++|+|++... +.+.+.-      .++.|+|.....+++      |.|+++..+.++
T Consensus         2 l~~~ik~~~~~--~G~Df~v~i~~~N~s~~~~~-v~l~l~a------~~v~YtG~~~~~~~~~~~~v~L~p~~~~~v~~~   72 (112)
T d1g0da2           2 LQLSIKHAQPV--FGTDFDVIVEVKNEGGRDAH-AQLTMLA------MAVTYNSLRRGECQRKTISVTVPAHKAHKEVMR   72 (112)
T ss_dssp             EEEEEEECCCB--TTCCEEEEEEEEECSSSCEE-EEEEEEE------EEECTTCBCCCCCCEEEEEEEECTTEEEEEEEE
T ss_pred             eEEEEeCCCCc--cCCCEEEEEEEEECCCCCEE-EEEEEEE------EEEEeCCcCccceeEeeEEEEECCCCeEEEEEE
Confidence            45566544433  79999999999999988776 7777754      478888887666543      899999999998


Q ss_pred             EEe
Q 013597          402 LIA  404 (439)
Q Consensus       402 l~p  404 (439)
                      +-+
T Consensus        73 i~y   75 (112)
T d1g0da2          73 LHY   75 (112)
T ss_dssp             ECH
T ss_pred             EcH
Confidence            765

>d2q3za2 b.1.5.1 (A:472-585) Transglutaminase, two C-terminal domains {Human (Homo sapiens), tissue isozyme [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Transglutaminase, two C-terminal domains
family: Transglutaminase, two C-terminal domains
domain: Transglutaminase, two C-terminal domains
species: Human (Homo sapiens), tissue isozyme [TaxId: 9606]

Probab=95.32  E-value=0.018  Score=46.38  Aligned_cols=65  Identities=20%  Similarity=0.254  Sum_probs=50.5

Q ss_pred             ecCceeEeCCcEEEEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEecccceeec-------ccCCCCeeEEEEEEEec
Q 013597          334 EVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALA-------PVEAFGSTDFHLNLIAT  405 (439)
Q Consensus       334 ~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg-------~L~P~~s~~~~L~l~pl  405 (439)
                      .+.+.+.+++.|.+.+.++|+|+.... +.+.+.-      .++.|+|.....++       .|.|+++..+.+.+-+-
T Consensus         7 k~~~~~~iG~Df~v~~~~~N~s~~~~~-v~l~l~a------~~v~YtG~~~~~~~~k~~~~v~L~p~~~~~v~~~v~y~   78 (114)
T d2q3za2           7 RVGQSMNMGSDFDVFAHITNNTAEEYV-CRLLLCA------RTVSYNGILGPECGTKYLLNLTLEPFSEKSVPLCILYE   78 (114)
T ss_dssp             ECCSCCBTTCCEEEEEEEEECSSSCEE-EEEEEEE------EEECTTCCEEEEEEEEEEEEEEECTTEEEEEEEEECHH
T ss_pred             EeCCCCcCCCCEEEEEEEEeCCCCCEE-EEEEEEE------EEEEeCCcCcceeEEecceEEEECCCCEEEEEEEEcHH
Confidence            567788999999999999999887665 6666644      36788877664432       48999999999987653

>d2q3za3 b.1.5.1 (A:586-683) Transglutaminase, two C-terminal domains {Human (Homo sapiens), tissue isozyme [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Transglutaminase, two C-terminal domains
family: Transglutaminase, two C-terminal domains
domain: Transglutaminase, two C-terminal domains
species: Human (Homo sapiens), tissue isozyme [TaxId: 9606]

Probab=94.62  E-value=0.079  Score=41.28  Aligned_cols=73  Identities=14%  Similarity=0.259  Sum_probs=60.7

Q ss_pred             ccceeecceEEEEEEEEcCCCcceEEEEEEEE---EeCCCeeEeccCCCCCCccccCCCCeeeEEEEEEccccCceEEEE
Q 013597           94 FGAIYLGETFCSYISINNSSTLEVRDVVIKAE---IQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVC  170 (439)
Q Consensus        94 fG~iylGEtFs~~i~v~N~s~~~v~~V~ikae---lqT~s~r~~L~~~~~~~~~~L~pg~~ld~iv~~~lke~G~h~L~c  170 (439)
                      .|.+.+|+.+.+.+++.|--..+++++.+.+|   |+-+..++.+.       ..+.||+++...+.+-=+..|.+.|.+
T Consensus         9 ~g~~~vg~~~~v~vsF~NPL~~~L~~c~~~vEG~GL~~~~~~~~~~-------~~v~pg~~~~~~~~~~P~~~G~~~L~a   81 (98)
T d2q3za3           9 LGEPKQKRKLVAEVSLQNPLPVALEGCTFTVEGAGLTEEQKTVEIP-------DPVEAGEEVKVRMDLVPLHMGLHKLVV   81 (98)
T ss_dssp             ESCCSSSSCEEEEEEEECCSSSCBCSEEEEEECTTTCSSCEEEEEC-------SCBCTTCEEEEEEEECCCSSSCEEEEE
T ss_pred             CCCcCcCCeEEEEEEEECCCCCchhCEEEEEEcCCcCcCcEEEeCC-------CccCCCCEEEEEEEEEcCCcccEEEEE
Confidence            46789999999999999999999999999998   44444444442       258999999999999999999999988


Q ss_pred             EEE
Q 013597          171 TAL  173 (439)
Q Consensus       171 ~Vs  173 (439)
                      ..+
T Consensus        82 ~f~   84 (98)
T d2q3za3          82 NFE   84 (98)
T ss_dssp             EEE
T ss_pred             EEe
Confidence            753

>d1vjja3 b.1.5.1 (A:594-692) Transglutaminase, two C-terminal domains {Human (Homo sapiens), TGase E3 [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Transglutaminase, two C-terminal domains
family: Transglutaminase, two C-terminal domains
domain: Transglutaminase, two C-terminal domains
species: Human (Homo sapiens), TGase E3 [TaxId: 9606]

Probab=94.36  E-value=0.08  Score=41.33  Aligned_cols=71  Identities=14%  Similarity=0.124  Sum_probs=59.3

Q ss_pred             cceeecceEEEEEEEEcCCCcceEEEEEEEE---EeCCCeeEeccCCCCCCccccCCCCeeeEEEEEEccccCceEEEEE
Q 013597           95 GAIYLGETFCSYISINNSSTLEVRDVVIKAE---IQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCT  171 (439)
Q Consensus        95 G~iylGEtFs~~i~v~N~s~~~v~~V~ikae---lqT~s~r~~L~~~~~~~~~~L~pg~~ld~iv~~~lke~G~h~L~c~  171 (439)
                      |.+.+|+.+.+.+++.|--..+++|+.+.+|   |.-+..++.+        +++.||+++...+.+-=+..|.+.|.+.
T Consensus         9 ~~~~v~~~~~v~vsf~NPL~~~L~~c~f~vEG~GL~~~~~~~~~--------~~v~p~~~~~~~~~~~P~~~G~~~l~a~   80 (99)
T d1vjja3           9 NEARVRKPVNVQMLFSNPLDEPVRDCVLMVEGSGLLLGNLKIDV--------PTLGPKERSRVRFDILPSRSGTKQLLAD   80 (99)
T ss_dssp             SCCBTTSCEEEEEEEECCSSSCBCSEEEEEECTTTSSSCEEEEE--------CCBCTTCEEEEEEEECCCSCEEEEEEEE
T ss_pred             CCcCcCCeEEEEEEEECCCCCchhCEEEEEEeCCCCCccEEEec--------CccCCCCEEEEEEEEEcCCcccEEEEEE
Confidence            6688999999999999999999999999998   4333333333        3589999999999999999999999887


Q ss_pred             EE
Q 013597          172 AL  173 (439)
Q Consensus       172 Vs  173 (439)
                      .+
T Consensus        81 f~   82 (99)
T d1vjja3          81 FS   82 (99)
T ss_dssp             EE
T ss_pred             EE
Confidence            53

>d3es6b1 b.1.18.23 (B:1-118) Prolactin-inducible protein, PIP {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: SVA-like
domain: Prolactin-inducible protein, PIP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.90  E-value=0.072  Score=42.79  Aligned_cols=73  Identities=11%  Similarity=0.018  Sum_probs=55.6

Q ss_pred             CCeEEEEEecCceeEeCCcEEEEEEEEeCCCCCcccEEEEEEeCCCCCcceEEEecccceeecccCCCCeeEEEEEEEec
Q 013597          326 KEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMALAPVEAFGSTDFHLNLIAT  405 (439)
Q Consensus       326 ~dl~l~v~~~P~~v~l~~pF~v~~~v~N~s~r~~~~l~l~l~~~~~~~~~~~~~~G~s~~~Lg~L~P~~s~~~~L~l~pl  405 (439)
                      +++-+. .++|-+++-++-|.++..|.|+.+..|. +.+.|..++     ++.......... -|.++++.+|.|.+.|+
T Consensus         6 k~~~~~-l~lP~sv~rge~~~i~~~V~Nyl~~~~~-v~v~L~~s~-----~~~~~~~~~~~~-cv~~~~~~t~~w~i~~~   77 (118)
T d3es6b1           6 KIIIKN-FDIPKSVRPNDEVTAVLAVQTELKECMV-VKTYLISSI-----PLQGAFNYKYTA-CLCDDNPKTFYWDFYTN   77 (118)
T ss_dssp             CCCEEC-CCCCSEECSSCCEEEEEEEEECCSSCEE-EEEEEEESS-----CCCSGGGCEEEE-EECSSSCEEEEEEECCS
T ss_pred             eeEEEE-cCCCceEecCCEEEEEEEEEECccceEE-EEEEEecCC-----CEEccCCCCcce-EECCCCceEEEEEEEec
Confidence            444333 2899999999999999999999999998 999998765     232223223333 67899999999999886


Q ss_pred             c
Q 013597          406 K  406 (439)
Q Consensus       406 ~  406 (439)
                      .
T Consensus        78 g   78 (118)
T d3es6b1          78 R   78 (118)
T ss_dssp             S
T ss_pred             C
Confidence            3

>d1g0da3 b.1.5.1 (A:584-684) Transglutaminase, two C-terminal domains {Red sea bream (Chrysophrys major) [TaxId: 143350]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Transglutaminase, two C-terminal domains
family: Transglutaminase, two C-terminal domains
domain: Transglutaminase, two C-terminal domains
species: Red sea bream (Chrysophrys major) [TaxId: 143350]

Probab=91.94  E-value=0.31  Score=37.95  Aligned_cols=72  Identities=15%  Similarity=0.241  Sum_probs=59.1

Q ss_pred             ccceeecceEEEEEEEEcCCCcceEEEEEEEE---EeCCCeeEeccCCCCCCccccCCCCeeeEEEEEEccccCceEEEE
Q 013597           94 FGAIYLGETFCSYISINNSSTLEVRDVVIKAE---IQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVC  170 (439)
Q Consensus        94 fG~iylGEtFs~~i~v~N~s~~~v~~V~ikae---lqT~s~r~~L~~~~~~~~~~L~pg~~ld~iv~~~lke~G~h~L~c  170 (439)
                      -|.+.+|+.+.+.+++.|--..+++|+.+.+|   |+- .+++..       .+++.||+++...+.+-=+..|.|.|.+
T Consensus         9 ~g~~~v~~~~~v~vsf~NPL~~~L~~c~~~vEG~GL~~-~~~~~~-------~~~v~p~~~~~~~~~~~P~~~G~~~L~a   80 (101)
T d1g0da3           9 PGKAVVWEPLTAYVSFTNPLPVPLKGGVFTLEGAGLLS-ATQIHV-------NGAVAPSGKVSVKLSFSPMRTGVRKLLV   80 (101)
T ss_dssp             CSCEETTCCEEEEEEEECCSSSCEESCEEEEEETTTEE-EEEEEC-------SSEECTTCEEEEEEEECCSSCEEEEEEE
T ss_pred             CCCcCcCCeEEEEEEEECCCCCeecCEEEEEEcCCCCc-ccEEEe-------cCCcCCCCEEEEEEEEEcCCcccEEEEE
Confidence            36789999999999999999999999999998   322 222322       2368999999999999999999999998


Q ss_pred             EEE
Q 013597          171 TAL  173 (439)
Q Consensus       171 ~Vs  173 (439)
                      ..+
T Consensus        81 ~f~   83 (101)
T d1g0da3          81 DFD   83 (101)
T ss_dssp             EEE
T ss_pred             EEe
Confidence            753

>d1ex0a3 b.1.5.1 (A:628-727) Transglutaminase, two C-terminal domains {Human (Homo sapiens), blood isozyme [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Transglutaminase, two C-terminal domains
family: Transglutaminase, two C-terminal domains
domain: Transglutaminase, two C-terminal domains
species: Human (Homo sapiens), blood isozyme [TaxId: 9606]

Probab=90.58  E-value=0.53  Score=36.43  Aligned_cols=71  Identities=13%  Similarity=0.164  Sum_probs=58.8

Q ss_pred             cceeecceEEEEEEEEcCCCcceEEEEEEEEEeC--CCeeEeccCCCCCCccccCCCCeeeEEEEEEccccCceEEEEEE
Q 013597           95 GAIYLGETFCSYISINNSSTLEVRDVVIKAEIQT--DKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTA  172 (439)
Q Consensus        95 G~iylGEtFs~~i~v~N~s~~~v~~V~ikaelqT--~s~r~~L~~~~~~~~~~L~pg~~ld~iv~~~lke~G~h~L~c~V  172 (439)
                      |.+.+|+.+.+.+++.|--+.+++|+.+.+|=--  ..+++.        .+++.||+++...+.+-=+..|.|.|.+..
T Consensus        11 g~~~v~~~~~v~v~F~NPL~~~L~nc~~~vEG~GL~~~~~~~--------~~~v~p~~~~~~~~~~~P~~~G~~~l~a~f   82 (100)
T d1ex0a3          11 GTQVVGSDMTVTVQFTNPLKETLRNVWVHLDGPGVTRPMKKM--------FREIRPNSTVQWEEVCRPWVSGHRKLIASM   82 (100)
T ss_dssp             ECCBTTSCEEEEEEEECCSSSCEEEEEEEEEETTTEEEEEEE--------EEEECTTCEEEEEEEECCSSCEEEEEEEEE
T ss_pred             CCcccCCeEEEEEEEECCCCCchhCEEEEEEcCCCceeeEEe--------cCccCCCCEEEEEEEEecCCcccEEEEEEE
Confidence            7789999999999999999999999999997411  112222        447899999999999999999999998875


Q ss_pred             E
Q 013597          173 L  173 (439)
Q Consensus       173 s  173 (439)
                      +
T Consensus        83 ~   83 (100)
T d1ex0a3          83 S   83 (100)
T ss_dssp             E
T ss_pred             E
Confidence            3