Citrus Sinensis ID: 013628


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------44
MLKSPTKGTMQITRWVIDLDWRLLLLIIPPLSILVFLSLSSIPINPFSTFTPIKSFISNRTLTPTTTTSTNSADFVISSPNGANPAAAQWKDELLRSRIAVCLVGGARRFELTGPSIIENILEVYPNADLFLHSPLDKNAYKFSLLKLAPRLASVRIFEPKPLNETESQVRVLTAAHSPNGIQGLLQYFNLVEGCLNMIEAYQKGNNFTYKWIVRTRVDGYWNLPLDPDNFIPDQYLVPPGSSFGGLNDRLGIGDLNTSIVALSRLSLIPQLDLAGFRQLNSETAFKAQLTTHHVPRLTKRLPFCIVTDRKYGFPPSRFGVPVAAMSSKGPLSGAKCRPCTAVCRGSCVNDVMLSLYKGWSWTNWENGTLELCDARGGWESDWEEIFDRVAGKKLASARKKVRSLGVRRCVDDFNKMKRRAFSWEAPPPEDICRLGLGS
ccccccccEEEEEEEcccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEccccccccccHHHHHHHHHHcccccEEEEcccccHHHHHHHHHcccccEEEEcccccccccccccHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEcccEEcccccccccccccEEEcccccccccccccccccHHHHHHHHHHcccccccHHHHcccccHHHHHHHHHHHcccccccccccEEEEEccccccccccccccEEcccccccccccccccccccccccHHHHHHHHHHccccccccccccEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccccccHHHHccccccc
cccccccEEEEEEEEHHHccHHHHHHHccHHHHHHHEEEcccccccccccccHHHHcccccccccccccccccccccccccccccHHHHHccccccccEEEEEEccccEEEcccHHHHHHHHHccccccEEEccccccccHHHHHHcccccccEEEEEccccccccccEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEEEcccccccccHHHccccEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHccccEEEccccEEEEEcccccccccccccEEEEEccccccccccccccccccccHHHHHHHHHHHcccccccccccEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccccHHHHHHccccc
mlksptkgtmqITRWVIDLDWRLLLLIIPPLSILVFLslssipinpfstftpiksfisnrtltpttttstnsadfvisspnganpaaAQWKDELLRSRIAVCLVGgarrfeltgpsiIENIlevypnadlflhspldknaYKFSLLKLAprlasvrifepkplneteSQVRVLTaahspngiqGLLQYFNLVEGCLNMIEAYQKGNNFTYKWIVRTRvdgywnlpldpdnfipdqylvppgssfgglndrlgigdlNTSIVALSRlslipqldlagfrqLNSETAFKAQltthhvprltkrlpfcivtdrkygfppsrfgvpvaamsskgplsgakcrpctavcrgscvnDVMLSLYKgwswtnwengtlelcdarggwesDWEEIFDRVAGKKLASARKKVRSLGVRRCVDDFNKMKrrafsweapppedicrlglgs
mlksptkgtmqiTRWVIDLDWRLLLLIIPPLSILVFLSLSSIPINPFSTFTPIKSFISNRTLTPTTTTSTNSADFVISSPNGANPAAAQWKDELLRSRIAVCLVGGARRFELTGPSIIENILEVYPNADLFLHSPLDKNAYKFSLLKLAPRLASVRIFEPKPLNETESQVRVLTAAHSPNGIQGLLQYFNLVEGCLNMIEAYQKGNNFTYKWIVRTRVDGYWNLPLDPDNFIPDQYLVPPGSSFGGLNDRLGIGDLNTSIVALSRLSLIPQLDLAGFRQLNSETAFKaqltthhvprltkrlpFCIVTDRKYGFPPSRFGVPVAAMSSKGPLSGAKCRPCTAVCRGSCVNDVMLSLYKgwswtnwenGTLELCDARGGWESDWEEIFDRVagkklasarkkvrslgvrrcvddfnkmkrrafsweapppedicrlglgs
MLKSPTKGTMQITRWVIDLDWRlllliipplsilvflslssipiNPFSTFTPIKSFISNRtltpttttstNSADFVISSPNGANPAAAQWKDELLRSRIAVCLVGGARRFELTGPSIIENILEVYPNADLFLHSPLDKNAYKFSLLKLAPRLASVRIFEPKPLNETESQVRVLTAAHSPNGIQGLLQYFNLVEGCLNMIEAYQKGNNFTYKWIVRTRVDGYWNLPLDPDNFIPDQYLVPPGSSFGGLNDRLGIGDLNTSIVALSRLSLIPQLDLAGFRQLNSETAFKAQLTTHHVPRLTKRLPFCIVTDRKYGFPPSRFGVPVAAMSSKGPLSGAKCRPCTAVCRGSCVNDVMLSLYKGWSWTNWENGTLELCDARGGWESDWEEIFDRVAGKKLASARKKVRSLGVRRCVDDFNKMKRRAFSWEAPPPEDICRLGLGS
*********MQITRWVIDLDWRLLLLIIPPLSILVFLSLSSIPINPFSTFTPIKSFISNRTLT************V**********AAQWKDELLRSRIAVCLVGGARRFELTGPSIIENILEVYPNADLFLHSPLDKNAYKFSLLKLAPRLASVRIFEPKPL*****QVRVLTAAHSPNGIQGLLQYFNLVEGCLNMIEAYQKGNNFTYKWIVRTRVDGYWNLPLDPDNFIPDQYLVPPGSSFGGLNDRLGIGDLNTSIVALSRLSLIPQLDLAGFRQLNSETAFKAQLTTHHVPRLTKRLPFCIVTDRKYGFPPSRFGVPVAAMSSKGPLSGAKCRPCTAVCRGSCVNDVMLSLYKGWSWTNWENGTLELCDARGGWESDWEEIFDRVAGKKLASARKKVRSLGVRRCVDDFNKMKRRAFSW***************
*********MQITRWVIDLDWRLLLLIIPPLSILVFLSLSSIPINPFSTFTPIKSFISNRTLTPTTTTST****************************IAVCLVGGARRFELTGPSIIENILEVYPNADLFLHSPLDKNAYKFSLLKLAPRLASVRIFEPKPLNETESQVRVLTAAHSPNGIQGLLQYFNLVEGCLNMIEAYQKGNNFTYKWIVRTRVDGYWNLPLDPDNFIPDQYLVPPGSSFGGLNDRLGIGDLNTSIVALSRLSLIPQLDLAGFRQLNSETAFKAQLTTHHVPRLTKRLPFCIVTDRKYGFPPSRFGVPVAAMSSKGPLSGAKCRPCTAVCR*SCVNDVMLSLYKGWSWTNWENGTLELCDARGGWESDWEEIFDRVAG****************RCVDDFNKMKRRAFSWEAPPPEDICRLGL**
********TMQITRWVIDLDWRLLLLIIPPLSILVFLSLSSIPINPFSTFTPIKSFISNRTLTPTTTTSTNSADFVISSPNGANPAAAQWKDELLRSRIAVCLVGGARRFELTGPSIIENILEVYPNADLFLHSPLDKNAYKFSLLKLAPRLASVRIFEPKPLNETESQVRVLTAAHSPNGIQGLLQYFNLVEGCLNMIEAYQKGNNFTYKWIVRTRVDGYWNLPLDPDNFIPDQYLVPPGSSFGGLNDRLGIGDLNTSIVALSRLSLIPQLDLAGFRQLNSETAFKAQLTTHHVPRLTKRLPFCIVTDRKYGFPPSRFGVPVAA************RPCTAVCRGSCVNDVMLSLYKGWSWTNWENGTLELCDARGGWESDWEEIFDRVAGK**********SLGVRRCVDDFNKMKRRAFSWEAPPPEDICRLGLGS
***SPTKGTMQITRWVIDLDWRLLLLIIPPLSILVFLSLSSIPINPFSTFTPIKSFISNRTLTPTTTTSTNSADFVISSPNGANPAAAQ*KDELLRSRIAVCLVGGARRFELTGPSIIENILEVYPNADLFLHSPLDKNAYKFSLLKLAPRLASVRIFEPKPLNETESQVRVLTAAHSPNGIQGLLQYFNLVEGCLNMIEAYQKGNNFTYKWIVRTRVDGYWNLPLDPDNFIPDQYLVPPGSSFGGLNDRLGIGDLNTSIVALSRLSLIPQLDLAGFRQLNSETAFKAQLTTHHVPRLTKRLPFCIVTDRKYGFPPSRFGVPVAAMSSKGPLSGAKCRPCTAVCRGSCVNDVMLSLYKGWSWTNWENGTLELCDARGGWESDWEEIFDRVAGKKLASARKKVRSLGVRRCVDDFNKMKRRAFSWEAPPPEDICRL****
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MLKSPTKGTMQITRWVIDLDWRLLLLIIPPLSILVFLSLSSIPINPFSTFTPIKSFISNRTLTPTTTTSTNSADFVISSPNGANPAAAQWKDELLRSRIAVCLVGGARRFELTGPSIIENILEVYPNADLFLHSPLDKNAYKFSLLKLAPRLASVRIFEPKPLNETESQVRVLTAAHSPNGIQGLLQYFNLVEGCLNMIEAYQKGNNFTYKWIVRTRVDGYWNLPLDPDNFIPDQYLVPPGSSFGGLNDRLGIGDLNTSIVALSRLSLIPQLDLAGFRQLNSETAFKAQLTTHHVPRLTKRLPFCIVTDRKYGFPPSRFGVPVAAMSSKGPLSGAKCRPCTAVCRGSCVNDVMLSLYKGWSWTNWENGTLELCDARGGWESDWEEIFDRVAGKKLASARKKVRSLGVRRCVDDFNKMKRRAFSWEAPPPEDICRLGLGS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query439
255539180421 conserved hypothetical protein [Ricinus 0.952 0.992 0.727 0.0
224086014439 predicted protein [Populus trichocarpa] 0.972 0.972 0.703 1e-167
225459856434 PREDICTED: uncharacterized protein LOC10 0.972 0.983 0.646 1e-165
297842379435 hypothetical protein ARALYDRAFT_895504 [ 0.968 0.977 0.645 1e-154
356509594426 PREDICTED: uncharacterized protein LOC10 0.956 0.985 0.622 1e-154
356517940426 PREDICTED: uncharacterized protein LOC10 0.956 0.985 0.615 1e-152
6573719482 T23E18.18 [Arabidopsis thaliana] 0.970 0.883 0.643 1e-152
15222990434 uncharacterized protein [Arabidopsis tha 0.965 0.976 0.645 1e-151
449455716430 PREDICTED: uncharacterized protein LOC10 0.945 0.965 0.612 1e-146
125537836445 hypothetical protein OsI_05613 [Oryza sa 0.767 0.757 0.55 1e-105
>gi|255539180|ref|XP_002510655.1| conserved hypothetical protein [Ricinus communis] gi|223551356|gb|EEF52842.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score =  640 bits (1652), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/429 (72%), Positives = 358/429 (83%), Gaps = 11/429 (2%)

Query: 10  MQITRWVIDLDWRLLLLIIPPLSILVFLSLSSIPINPFSTFTPIKSFISNRTLTPTTTTS 69
           M ITRW  DLDWR LLLI PPLS L+F+S+SS PI+PFS+F P+ SF  NRT T  +   
Sbjct: 1   MFITRWFSDLDWRFLLLIAPPLSFLIFISVSSTPISPFSSFPPLASFFFNRT-TAASLPL 59

Query: 70  TNSADFVISSPNGANPAAAQWKDELLRSRIAVCLVGGARRFELTGPSIIENILEVYPNAD 129
             +    I S          WKDEL RSRIAVCLVGGARRFELTGPSI++NIL VYPN+D
Sbjct: 60  NRTELLPIRS----------WKDELDRSRIAVCLVGGARRFELTGPSIVDNILNVYPNSD 109

Query: 130 LFLHSPLDKNAYKFSLLKLAPRLASVRIFEPKPLNETESQVRVLTAAHSPNGIQGLLQYF 189
           LFLHSPLD+N++KFSLLK+A RLASVRIF+PKP+ ETESQVRVLTAA+SPNGIQGLLQYF
Sbjct: 110 LFLHSPLDQNSFKFSLLKIASRLASVRIFQPKPMPETESQVRVLTAANSPNGIQGLLQYF 169

Query: 190 NLVEGCLNMIEAYQKGNNFTYKWIVRTRVDGYWNLPLDPDNFIPDQYLVPPGSSFGGLND 249
           NLVEGCL MIE YQ  NNFTY WIVRTRVDGYWN PLDPDNFIP QYLVPPGS++GGLND
Sbjct: 170 NLVEGCLTMIEEYQTQNNFTYDWIVRTRVDGYWNAPLDPDNFIPGQYLVPPGSTYGGLND 229

Query: 250 RLGIGDLNTSIVALSRLSLIPQLDLAGFRQLNSETAFKAQLTTHHVPRLTKRLPFCIVTD 309
           RLGIGD N SI+ALSRLS+IP+LD AGFR LNSET+FKAQLTTH VP +TKRLPFCIV+D
Sbjct: 230 RLGIGDFNVSIIALSRLSVIPKLDSAGFRMLNSETSFKAQLTTHGVPFVTKRLPFCIVSD 289

Query: 310 RKYGFPPSRFGVPVAAMSSKGPLSGAKCRPCTAVCRGSCVNDVMLSLYKGWSWTNWENGT 369
           RKYGFPP+RFGVPVAA++S GPLSGAKCRPCT VC+GSCV  +M  L KGWSWTNWENGT
Sbjct: 290 RKYGFPPNRFGVPVAALASPGPLSGAKCRPCTPVCKGSCVGVIMQWLDKGWSWTNWENGT 349

Query: 370 LELCDARGGWESDWEEIFDRVAGKKLASARKKVRSLGVRRCVDDFNKMKRRAFSWEAPPP 429
           L+LCDA   WE+ WE +FD+VAGK+ A+ARK+V  L +++CVDDF+ MKRRA  W++PP 
Sbjct: 350 LQLCDAHEDWENGWEILFDKVAGKQRAAARKRVWGLKLKQCVDDFSDMKRRAGKWDSPPV 409

Query: 430 EDICRLGLG 438
           ED+CRLG+G
Sbjct: 410 EDMCRLGVG 418




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224086014|ref|XP_002307778.1| predicted protein [Populus trichocarpa] gi|222857227|gb|EEE94774.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225459856|ref|XP_002285930.1| PREDICTED: uncharacterized protein LOC100262535 [Vitis vinifera] gi|302141669|emb|CBI18872.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|297842379|ref|XP_002889071.1| hypothetical protein ARALYDRAFT_895504 [Arabidopsis lyrata subsp. lyrata] gi|297334912|gb|EFH65330.1| hypothetical protein ARALYDRAFT_895504 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|356509594|ref|XP_003523532.1| PREDICTED: uncharacterized protein LOC100814333 [Glycine max] Back     alignment and taxonomy information
>gi|356517940|ref|XP_003527643.1| PREDICTED: uncharacterized protein LOC100786713 [Glycine max] Back     alignment and taxonomy information
>gi|6573719|gb|AAF17639.1|AC009978_15 T23E18.18 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|15222990|ref|NP_177752.1| uncharacterized protein [Arabidopsis thaliana] gi|26451994|dbj|BAC43087.1| unknown protein [Arabidopsis thaliana] gi|28951023|gb|AAO63435.1| At1g76250 [Arabidopsis thaliana] gi|332197694|gb|AEE35815.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449455716|ref|XP_004145597.1| PREDICTED: uncharacterized protein LOC101216898 [Cucumis sativus] gi|449485275|ref|XP_004157120.1| PREDICTED: uncharacterized protein LOC101225904 [Cucumis sativus] Back     alignment and taxonomy information
>gi|125537836|gb|EAY84231.1| hypothetical protein OsI_05613 [Oryza sativa Indica Group] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query439
TAIR|locus:2199782434 AT1G76250 [Arabidopsis thalian 0.972 0.983 0.613 3.5e-139
TAIR|locus:2199782 AT1G76250 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1362 (484.5 bits), Expect = 3.5e-139, P = 3.5e-139
 Identities = 265/432 (61%), Positives = 310/432 (71%)

Query:    10 MQITRWVIDLDWRXXXXXXX-XXXXXXXXXXXXXXXNPFSTFTPIKSFISNRXXXXXXXX 68
             M ++R + D+D R                       +PF T  P+++ I           
Sbjct:     1 MYVSRRISDVDRRLLLLLIIPSLTLLVLISFSSLSLDPFPTLAPLRNLIYTHTLTVTDFT 60

Query:    69 ---XXNSADFVISSPNGANPAAAQWKDELLRSRIAVCLVGGARRFELTGPSIIENILEVY 125
                  ++ + VI +    N    + ++EL++S+IAVCLVGGARRFELTGPSI+E IL VY
Sbjct:    61 VELSDSNPNDVIQAEEMENRRRRK-REELVKSKIAVCLVGGARRFELTGPSIMEKILRVY 119

Query:   126 PNADLFLHSPLDKNAYKFSLLKLAPRLASVRIFEPKPLNETESQVRVLTAAHSPNGIQGL 185
             PNADLFL+SPLDKN++K  LLK APRLA VRIFEPKP+NETE  VRVLT  +SPNGI+GL
Sbjct:   120 PNADLFLNSPLDKNSFKLRLLKDAPRLAWVRIFEPKPINETEPMVRVLTPMNSPNGIKGL 179

Query:   186 LQYFNLVEGCLNMIEAYQKGNNFTYKWIVRTRVDGYWNLPLDPDNFIPDQYLVPPGSSFG 245
             LQYFNLVEGC+ MI+AYQ  NNFTY WIVRTRVDGYW  PLDP+ FIP QYLVPPGSS+G
Sbjct:   180 LQYFNLVEGCITMIKAYQNENNFTYDWIVRTRVDGYWADPLDPEYFIPGQYLVPPGSSYG 239

Query:   246 GLNDRLGIGDLNTSIVALSRLSLIPQLDLAGFRQLNSETAFKAQLTTHHVPRLTKRLPFC 305
             GLNDR G+GDLNTS VALSRLSLIP LD AG   LNSE+AFKAQLTT  VP +TK LPFC
Sbjct:   240 GLNDRFGVGDLNTSTVALSRLSLIPDLDSAGLTHLNSESAFKAQLTTQRVPYVTKPLPFC 299

Query:   306 IVTDRKYGFPPSRFGVPVAAMSSKGPLSGAKCRPCTAVCRGSCVNDVMLSLYKGWSWTNW 365
             I+TDR Y FPP R+GVPVAA+SS+GPL+GAKCRPCT  C GSCV +VM  L K WSWT W
Sbjct:   300 IMTDRTYDFPPYRYGVPVAALSSRGPLNGAKCRPCTVACNGSCVAEVMGKLNKEWSWTEW 359

Query:   366 ENGTLELCDARGGWESDWEEIFDRVAGKKLASARKKVRSLGVRRCVDDFNKMKRRAFSWE 425
             EN T+ELCDA G WE  WE+IFD  AG+KLA ARK+V  L  RRCV++F  M+  A  WE
Sbjct:   360 ENETVELCDAHGEWEKGWEKIFDETAGEKLALARKRVGGLDSRRCVEEFENMRGMAVKWE 419

Query:   426 APPPEDICRLGL 437
             AP  E IC LGL
Sbjct:   420 APASEQICTLGL 431


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.137   0.436    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      439       407   0.00078  118 3  11 22  0.38    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  626 (67 KB)
  Total size of DFA:  291 KB (2149 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  30.41u 0.10s 30.51t   Elapsed:  00:00:01
  Total cpu time:  30.41u 0.10s 30.51t   Elapsed:  00:00:01
  Start:  Sat May 11 08:47:52 2013   End:  Sat May 11 08:47:53 2013


GO:0005739 "mitochondrion" evidence=ISM
GO:0008150 "biological_process" evidence=ND

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Conserved Domains Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query439
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-06
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 49.1 bits (116), Expect = 3e-06
 Identities = 58/397 (14%), Positives = 117/397 (29%), Gaps = 115/397 (28%)

Query: 8   GTMQITRWVIDLDWRLLLLIIPPLSILVFLSLSSIPINPFSTFTPIKSFISN-------- 59
                   V+++  +LL  I P  +     S S+I +   S    ++  + +        
Sbjct: 190 KNCNSPETVLEMLQKLLYQIDPNWTSRSDHS-SNIKLRIHSIQAELRRLLKSKPYENCLL 248

Query: 60  ------------------RTLTPTTTTSTNSADFVISS----PNGANPAAAQWKDELLRS 97
                             + L   TT      DF+ ++     +  + +     DE+  S
Sbjct: 249 VLLNVQNAKAWNAFNLSCKILL--TTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVK-S 305

Query: 98  RIAVCLVGGARRFEL------TGP---SIIENILEVYPN-ADLFLHSPLDK--NAYKFSL 145
            +   L    R  +L      T P   SII   +       D + H   DK     + SL
Sbjct: 306 LLLKYL--DCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSL 363

Query: 146 LKLAP--------RLASVRIFE-----PKPL------NETESQVRV---------LTAAH 177
             L P        RL+   +F      P  L      +  +S V V         L    
Sbjct: 364 NVLEPAEYRKMFDRLS---VFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQ 420

Query: 178 SPNGIQGLLQ-YFNLVEGCLN-------MIEAYQKGNNFTYKWIVRTRVDGYW------- 222
                  +   Y  L     N       +++ Y     F    ++   +D Y+       
Sbjct: 421 PKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHH 480

Query: 223 ---NLPLDPDNFIPDQYLVPPGSSFGGLNDRLGIGDLNTSIVALSRLSLIPQL-DLAGFR 278
                  +        +L      F  L  ++     + S    +  S++  L  L  ++
Sbjct: 481 LKNIEHPERMTLFRMVFL-----DFRFLEQKI----RHDSTAWNASGSILNTLQQLKFYK 531

Query: 279 Q--LNSETAFKAQLTT--HHVPRLTKRL---PF-CIV 307
               +++  ++  +      +P++ + L    +  ++
Sbjct: 532 PYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLL 568


Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00