Citrus Sinensis ID: 013841

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-----
Protein Sequence
MHDKPTHPLHSTPLHSTPLLVHKSTDTVTAAAMENRPLLTTNLLLFPLLVLLLSSTTSHAHNITRILAKHPEFSTFNHYLTVTHLAAEINRRQTITVLALDNSAMSSLLSKQLSVYTLRNVLSLHVLTDYFGSKKLHQITNGTALTSSMFQATGSAPGSSGYVNVTDLKGGKVGFGAEDNDGKLDATYVKSVAEFPYNISVLQISQVLNSDEAEAPTPGPSGLNLTAIMAKQGCKAFADLLIATGAHTTFEENLDGGLTVFCPTDAVVNDFMPKYKNLTEAHKVSLLLYHGTPVYQSLQTLKSSNGVMNTLATDGASKYDFTVQNDGEIVTLKTKATTAKITGTLKDEEPLVIYKINKVLLPIELFKPEVETEAPAPAPTPHKRKTKKDKDEAEADAPVDDSEDQTADNENGVGRISGGHLIWMVLSSCMGIFFI
Secondary Structure (PSIPRED)
ccccccccccccccccccEEEEccccHHHHHHHccHHHHHHHHHHHHHHHHHHHccccccccHHHHHHcccccHHHHHHHHHHcHHHHHcccccEEEEEEccHHHHHHHcccccHHHHHHHHHcccccccccccccccccccccEEEEccccccccccccccEEEEccccccEEEcccccccccccEEEcEEccccccEEEEEEEcccccccccccccccccccHHHHHHHHcHHHHHHHHHHHcccccccccccccEEEEccccHHHHccccccccccHHHHHHHHHHHcccccHHHHHHHccccccccEEEcccccEEEEEEEcccEEEEEEccEEEEEEccEEccccEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccEEEEccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHcccHHHHccccEEEEEEEcccHHHHHHcccccHHHHHHHHHHHHHHHHccHHHHHccccccEEEEEHEHcccccccccEEEEEEEccccEEEEEccccccccccEEEEEEEEcccEEEEEEEccccccccccccccccccccHHHHHHHcccHHHHHHHHccccHHHHHccccccEEEEccccHHHHHcccccccccHHHHHHHHHHHccccEccHHHcccccccccEEcccccccEEEEEEEcccEEEEEccEEEEEEEcEEEccccEEEEEEccEcccHHHccccccccccccccccccccccccccccccccccccccccccccccccHHHcHHHHHHHHHHHHHHHHHc
Coil and Loop (DISEMBL)
mhdkpthplhstplhstpllvhksTDTVTAAAMENRPLLTTNLLLFPLLVLLLSSTTSHAHNITRILakhpefstfnhyLTVTHLAAEINRRQTITVLALDNSAMSSLLSKQLSVYTLRNVLSLHVLTdyfgskklhqitnGTALTSSmfqatgsapgssgyvnvtdlkggkvgfgaedndgkldaTYVKSVAEFPYNISVLQISQVlnsdeaeaptpgpsglnLTAIMAKQGCKAFADLLIATgahttfeenldggltvfcptdavvndfmpkyknLTEAHKVSLLLyhgtpvyqslqtlkssngvmntlatdgaskydftvqndgeivtlKTKATTAKItgtlkdeeplVIYKINKVLlpielfkpeveteapapaptphkrktkkdkdeaeadapvddsedqtadnengvgriSGGHLIWMVLSscmgiffi
Flexible Loop (DISEMBL)
mhdkpthplhstplhstpllVHKSTDTVTAAAMENRPLLTTNLLLFPLLVLLLSSTTSHAHNITRILAKHPEFSTFNHYLTVTHLAAEINRRQTITVLALDNSAMSSLLSKQLSVYTLRNVLSLHVLTDYFGSKKLHQITNGTALTSSMFQATGSAPGSSGYVNVTDLKGGKVGFGAEDNDGKLDATYVKSVAEFPYNISVLQISQVLNSDEAEAPTPGPSGLNLTAIMAKQGCKAFADLLIATGAHTTFEENLDGGLTVFCPTDAVVNDFMPKYKNLTEAHKVSLLLYHGTPVYQSLQTLKSSNGVMNTLATDgaskydftvqndgeivtlktkattakitgtlkdeeplviYKINKVLLPIELfkpeveteapapaptphkrktkkdkdeaeadapvddsedqtadnengvGRISGGHLIWMVLSSCMGIFFI
Low Complexity Region (SEG)
MHDKPTHPLHSTPLHSTPLLVHKSTDTVTAAAMENRPllttnlllfpllvlllssttsHAHNITRILAKHPEFSTFNHYLTVTHLAAEINRRQTITVLALDNSAMSSLLSKQLSVYTLRNVLSLHVLTDYFGSKKLHQITNGTALTSSMFQATGSAPGSSGYVNVTDLKGGKVGFGAEDNDGKLDATYVKSVAEFPYNISVLQISQVLNSDEAEAPTPGPSGLNLTAIMAKQGCKAFADLLIATGAHTTFEENLDGGLTVFCPTDAVVNDFMPKYKNLTEAHKVSLLLYHGTPVYQSLQTLKSSNGVMNTLATDGASKYDFTVQNDGEIVtlktkattakitgtlkDEEPLVIYKINKVLLPIELFKpeveteapapaptpHKRKTkkdkdeaeadapvddsedQTADNENGVGRISGGHLIWMVLSSCMGIFFI
Disordered region (IsUnstruct)
*************************DTVTAAAMENRPLLTTNLLLFPLLVLLLSSTTSHAHNITRILAKHPEFSTFNHYLTVTHLAAEINRRQTITVLALDNSAMSSLLSKQLSVYTLRNVLSLHVLTDYFGSKKLHQITNGTALTS*M***********GYVNVTDLKGGKVGFGAEDNDGKLDATYVKSVAEFPYNISVLQISQVL**************LNLTAIMAKQGCKAFADLLIATGAHTTFEENLDGGLTVFCPTDAVVNDFMPKYKNLTEAHKVSLLLYHGTPVYQSLQTLKSSNGVMNTLATDGASKYDFTVQNDGEIVTLKTKATTAKITGTLKDEEPLVIYKINKVLLPIELFK**********************************************GRISGGHLIWMVLSSCMGIFF*
Disordered Region (DISOPRED)
*********HSTPLHSTPLLVHKSTDTVTAAAMENRPLLTTNLLLFPLLVLLLSSTTSHAHNITRILAKHPEFSTFNHYLTVTHLAAEINRRQTITVLALDNSAMSSLLSKQLSVYTLRNVLSLHVLTDYFGSKKLHQITNGTALTSSMFQATGSAPGSSGYVNVTDLKGGKVGFGAEDNDGKLDATYVKSVAEFPYNISVLQISQVLNSDEAEAPTPGPSGLNLTAIMAKQGCKAFADLLIATGAHTTFEENLDGGLTVFCPTDAVVNDFMPKYKNLTEAHKVSLLLYHGTPVYQSLQTLKSSNGVMNTLATDGASKYDFTVQNDGEIVTLKTKATTAKITGTLKDEEPLVIYKINKVLLPIE***************************************************ISGGHLIWMVLSSCMGIFFI
Disordered Region (DISEMBL)
**********STPLHSTPLLVHKSTDTVTAAAMENRPLLTTNLLLFPLLVLLLSSTTSHAHNITRILAKHPEFSTFNHYLTVTHLAAEINRRQTITVLALDNSAMSSLLSKQLSVYTLRNVLSLHVLTDYFGSKKLHQITNGTALTSSMFQATGSAPGSSGYVNVTDLKGGKVGFGAEDNDGKLDATYVKSVAEFPYNISVLQISQVLNSDEAEAPTPGPSGLNLTAIMAKQGCKAFADLLIATGAHTTFEENLDGGLTVFCPTDAVVNDFMPKYKNLTEAHKVSLLLYHGTPVYQSLQTLKSSNGVMNTLATDGASKYDFTVQNDGEIVTLKTKATTAKITGTLKDEEPLVIYKINKVLLPIELFKPEVE************************************DNENGVGRISGGHLIWMVLSSCMGIFFI
Disordered Region (DISPRO)
*******PLHSTPLHSTPLLVHKSTDTVTAAAMENRPLLTTNLLLFPLLVLLLSSTTSHAHNITRILAKHPEFSTFNHYLTVTHLAAEINRRQTITVLALDNSAMSSLLSKQLSVYTLRNVLSLHVLTDYFGSKKLHQITNGTALTSSMFQATGSAPGSSGYVNVTDLKGGKVGFGAEDNDGKLDATYVKSVAEFPYNISVLQISQVLNSDEAEAPTPGPSGLNLTAIMAKQGCKAFADLLIATGAHTTFEENLDGGLTVFCPTDAVVNDFMPKYKNLTEAHKVSLLLYHGTPVYQSLQTLKSSNGVMNTLATDGASKYDFTVQNDGEIVTLKTKATTAKITGTLKDEEPLVIYKINKVLLPIELFKP*******************************************GVGRISGGHLIWMVLSSCMGIFFI
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MHDKPTHPLHSTPLHSTPLLVHKSTDTVTAAAMENRPLLTTNLLLFPLLVLLLSSTTSHAHNITRILAKHPEFSTFNHYLTVTHLAAEINRRQTITVLALDNSAMSSLLSKQLSVYTLRNVLSLHVLTDYFGSKKLHQITNGTALTSSMFQATGSAPGSSGYVNVTDLKGGKVGFGAEDNDGKLDATYVKSVAEFPYNISVLQISQVLNSDEAEAPTPGPSGLNLTAIMAKQGCKAFADLLIATGAHTTFEENLDGGLTVFCPTDAVVNDFMPKYKNLTEAHKVSLLLYHGTPVYQSLQTLKSSNGVMNTLATDGASKYDFTVQNDGEIVTLKTKATTAKITGTLKDEEPLVIYKINKVLLPIELFKPEVETEAPAPAPTPHKRKTKKDKDEAEADAPVDDSEDQTADNENGVGRISGGHLIWMVLSSCMGIFFI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	435	2.2.26 [Sep-21-2011]
Q9SU13	403	Fasciclin-like arabinogal	yes	no	0.905	0.977	0.587	1e-133
Q9FM65	424	Fasciclin-like arabinogal	no	no	0.714	0.733	0.608	1e-104
O22126	420	Fasciclin-like arabinogal	no	no	0.852	0.883	0.417	1e-75
Q9LZX4	422	Fasciclin-like arabinogal	no	no	0.802	0.827	0.472	7e-75
Q9SNC3	420	Fasciclin-like arabinogal	no	no	0.717	0.742	0.320	5e-32
Q9LTW9	255	Fasciclin-like arabinogal	no	no	0.354	0.603	0.448	3e-30
Q9ZQ23	280	Fasciclin-like arabinogal	no	no	0.363	0.564	0.403	5e-24
O49586	278	Fasciclin-like arabinogal	no	no	0.328	0.514	0.390	4e-21
Q8LEJ6	246	Fasciclin-like arabinogal	no	no	0.390	0.691	0.325	2e-16
Q9SIL7	247	Fasciclin-like arabinogal	no	no	0.517	0.910	0.325	2e-15

>sp|Q9SU13|FLA2_ARATH Fasciclin-like arabinogalactan protein 2 OS=Arabidopsis thaliana GN=FLA2 PE=1 SV=1

 Score =  476 bits (1225), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 238/405 (58%), Positives = 306/405 (75%), Gaps = 11/405 (2%)

Query: 36  RPLLTTNLLLFPLLVLLLSSTTSHAHNITRILAKHPEFSTFNHYLTVTHLAAEINRRQTI 95
           R   T  +L+F L + L   + S+AHNITRILAK P+FSTFNHYL+ THLA EINRRQTI
Sbjct: 5   RRAATALVLIFQLHLFL---SLSNAHNITRILAKDPDFSTFNHYLSATHLADEINRRQTI 61

Query: 96  TVLALDNSAMSSLLSKQLSVYTLRNVLSLHVLTDYFGSKKLHQITNGTALTSSMFQATGS 155
           TVLA+DNSAMSS+LS   S+Y +RN+LSLHVL DYFG+KKLHQIT+G+  T+SMFQ+TGS
Sbjct: 62  TVLAVDNSAMSSILSNGYSLYQIRNILSLHVLVDYFGTKKLHQITDGSTSTASMFQSTGS 121

Query: 156 APGSSGYVNVTDLKGGKVGFGAEDNDGKLDATYVKSVAEFPYNISVLQISQVLNSDEAEA 215
           A G+SGY+N+TD+KGGKV FG +D+D KL A YVKSV E PYNISVL ISQVL S EAEA
Sbjct: 122 ATGTSGYINITDIKGGKVAFGVQDDDSKLTAHYVKSVFEKPYNISVLHISQVLTSPEAEA 181

Query: 216 PTPGPSGLNLTAIMAKQGCKAFADLLIATGAHTTFEENLDGGLTVFCPTDAVVNDFMPKY 275
           PT  PS L LT I+ KQGCKAF+D+L +TGA  TF++ +DGGLTVFCP+D+ V  FMPK+
Sbjct: 182 PTASPSDLILTTILEKQGCKAFSDILKSTGADKTFQDTVDGGLTVFCPSDSAVGKFMPKF 241

Query: 276 KNLTEAHKVSLLLYHGTPVYQSLQTLKSSNGVMNTLATDGASKYDFTVQNDGEIVTLKTK 335
           K+L+ A+K +L+LYHG PVYQSLQ L+S NG +NTLAT+G +K+DFTVQNDGE VTL+T 
Sbjct: 242 KSLSPANKTALVLYHGMPVYQSLQMLRSGNGAVNTLATEGNNKFDFTVQNDGEDVTLETD 301

Query: 336 ATTAKITGTLKDEEPLVIYKINKVLLPIELFKPEVETEAPAPAPTPHKRKTKKDKDEAEA 395
             TAK+ GTLKD+EPL++YKI+KVLLP E++K    +     +     +  + D D   A
Sbjct: 302 VVTAKVMGTLKDQEPLIVYKIDKVLLPREIYKAVKTSAPAPKSSKKKPKNAEADADGPSA 361

Query: 396 DAPVDDSEDQTADNENG-----VGRISGGHLIWMVLSSCMGIFFI 435
           DAP DD + + AD++NG     + R S  +++  ++  C G++ +
Sbjct: 362 DAPSDD-DVEVADDKNGAVSAMITRTS--NVVTAIVGLCFGVWLM 403

May be a cell surface adhesion protein.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9FM65|FLA1_ARATH Fasciclin-like arabinogalactan protein 1 OS=Arabidopsis thaliana GN=FLA1 PE=1 SV=1

 Score =  379 bits (973), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 191/314 (60%), Positives = 246/314 (78%), Gaps = 3/314 (0%)

Query: 55  STTSHAHNITRILAKHPEFSTFNHYLTVTHLAAEINRRQTITVLALDNSAMSSLLSKQLS 114
           +T +HAHN+TR+LA HP FS+F+H+LT THLA EINRR+TITV A+DN+AMS+L SK  +
Sbjct: 19  TTQTHAHNVTRLLANHPSFSSFSHFLTQTHLADEINRRRTITVCAVDNAAMSALTSKGYT 78

Query: 115 VYTLRNVLSLHVLTDYFGSKKLHQITNGTALTSSMFQATGSAPGSSGYVNVTDLKGGKVG 174
           + TL+N+LSLHVL DYFG+KKLHQI +G+AL +++FQATG+APG+SG+VN+TDL+GGKVG
Sbjct: 79  LSTLKNILSLHVLLDYFGTKKLHQIRDGSALAATLFQATGAAPGTSGFVNITDLRGGKVG 138

Query: 175 FGAEDNDGKLDATYVKSVAEFPYNISVLQISQVLNSDEAEAPTPGPSGLNLTAIMAKQGC 234
           FG +  D  L + +VKS+ E PYNIS++QIS+VL S+ A APTP P+ +NLT IM+  GC
Sbjct: 139 FGPDGGD--LSSFFVKSIEEVPYNISIIQISRVLPSETAAAPTPAPAEMNLTGIMSAHGC 196

Query: 235 KAFAD-LLIATGAHTTFEENLDGGLTVFCPTDAVVNDFMPKYKNLTEAHKVSLLLYHGTP 293
           K FA+ LL   GA  T++E+L+GG+TVFCP D  +  F+PKYKNLT   K + L +   P
Sbjct: 197 KVFAETLLTNPGASKTYQESLEGGMTVFCPGDDAMKGFLPKYKNLTAPKKEAFLDFLAVP 256

Query: 294 VYQSLQTLKSSNGVMNTLATDGASKYDFTVQNDGEIVTLKTKATTAKITGTLKDEEPLVI 353
            Y S+  LKS+NG MNTLATDGA+K++ TVQNDGE VTLKT+  T KI  TL DE+PL I
Sbjct: 257 TYYSMAMLKSNNGPMNTLATDGANKFELTVQNDGEKVTLKTRINTVKIVDTLIDEQPLAI 316

Query: 354 YKINKVLLPIELFK 367
           Y  +KVLLP ELFK
Sbjct: 317 YATDKVLLPKELFK 330

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

>sp|O22126|FLA8_ARATH Fasciclin-like arabinogalactan protein 8 OS=Arabidopsis thaliana GN=FLA8 PE=1 SV=1

 Score =  283 bits (725), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 165/395 (41%), Positives = 242/395 (61%), Gaps = 24/395 (6%)

Query: 40  TTNLLLFPLLVLLLSSTTSHAHNITRILAKHPEFSTFNHYLTVTHLAAEINRRQTITVLA 99
           T +LL F   +L  +ST S +HNIT+ILA  P++S+FN YL+ T LA EIN R TITVL 
Sbjct: 6   TFSLLAFTFSLLAFASTVS-SHNITQILADSPDYSSFNSYLSQTKLADEINSRTTITVLV 64

Query: 100 LDNSAMSSLLSKQ-LSVYTLRNVLSLHVLTDYFGSKKLHQITNGTALTSSMFQATGSAPG 158
           L+N AMS+L  K  LSV  +++ LSL VL DY+  +KLH+I+ GT L+++++Q TG+APG
Sbjct: 65  LNNGAMSALAGKHPLSV--IKSALSLLVLLDYYDPQKLHKISKGTTLSTTLYQTTGNAPG 122

Query: 159 SSGYVNVTDLKGGKVGFGAEDNDGKLDATYVKSVAEFPYNISVLQI-SQVLNSDEAEAPT 217
           + G+VN+TDLKGGKVGFG+  +  KLD++Y KSV + PYNIS+L+I + ++      AP 
Sbjct: 123 NLGFVNITDLKGGKVGFGSAASGSKLDSSYTKSVKQIPYNISILEIDAPIIAPGVLTAPA 182

Query: 218 PGPSGLNLTAIMAKQGCKAFADLLIATGAHTTFEENLDGGLTVFCPTD-AVVNDFMPKYK 276
           P  S  N+T ++ K GCK FA+LL+++G   T+E  ++ GLTVF P+D A   + +P   
Sbjct: 183 PSASLSNITGLLEKAGCKTFANLLVSSGVLKTYESAVEKGLTVFAPSDEAFKAEGVPDLT 242

Query: 277 NLTEAHKVSLLLYHGTPVYQSLQTLKSSNGVMNTLATDGASKYDFTVQNDGEIVTLKTKA 336
            LT+A  VSLL YH    Y+   +LK++   ++TLAT+GA K+D T    G+ V L T  
Sbjct: 243 KLTQAEVVSLLEYHALAEYKPKGSLKTNKNNISTLATNGAGKFDLTTSTSGDEVILHTGV 302

Query: 337 TTAKITGTLKDEEPLVIYKINKVLLPIELFKPE-------VETEAPAPAPTP-------- 381
             +++  T+ D  P+VI+ ++ VLLP ELF                AP P+P        
Sbjct: 303 APSRLADTVLDATPVVIFTVDNVLLPAELFGKSKSPSPAPAPEPVTAPTPSPADAPSPTA 362

Query: 382 ---HKRKTKKDKDEAEADAPVDDSEDQTADNENGV 413
                  T +  + A +D+P   +  ++A+   GV
Sbjct: 363 ASPPAPPTDESPESAPSDSPTGSANSKSANAAVGV 397

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LZX4|FLA10_ARATH Fasciclin-like arabinogalactan protein 10 OS=Arabidopsis thaliana GN=FLA10 PE=1 SV=1

 Score =  281 bits (719), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 171/362 (47%), Positives = 237/362 (65%), Gaps = 13/362 (3%)

Query: 43  LLLFPLLVLLLSSTTSHAHNITRILAKHPEFSTFNHYLTVTHLAAEINRRQTITVLALDN 102
           L  F L +L ++ST S  HNIT+IL+  PE+S+FN+YL+ T LA EIN R TITVL L+N
Sbjct: 9   LFAFTLSLLTVASTVS-GHNITQILSDTPEYSSFNNYLSQTKLADEINSRTTITVLVLNN 67

Query: 103 SAMSSLLSKQ-LSVYTLRNVLSLHVLTDYFGSKKLHQITNGTALTSSMFQATGSAPGSSG 161
            AMSSL  K  LSV  ++N LSL VL DY+   KLHQ++ GT LT++++Q TG A G+ G
Sbjct: 68  GAMSSLAGKHPLSV--VKNALSLLVLLDYYDPLKLHQLSKGTTLTTTLYQTTGHALGNLG 125

Query: 162 YVNVTDLKGGKVGFGAEDNDGKLDATYVKSVAEFPYNISVLQI-SQVLNSDEAEAPTPGP 220
           +VNVTDLKGGKVGFG+     KLD++Y KSV + PYNISVL+I + ++      AP P  
Sbjct: 126 FVNVTDLKGGKVGFGSAAPGSKLDSSYTKSVKQIPYNISVLEINAPIIAPGILTAPAPSS 185

Query: 221 SGL-NLTAIMAKQGCKAFADLLIATGAHTTFEENLDGGLTVFCPTD-AVVNDFMPKYKNL 278
           +G+ N+T ++ K GCK FA+LL+++G   TFE  ++ GLTVF P+D A     +P   NL
Sbjct: 186 AGVSNITGLLEKAGCKTFANLLVSSGVIKTFESTVEKGLTVFAPSDEAFKARGVPDLTNL 245

Query: 279 TEAHKVSLLLYHGTPVYQSLQTLKSSNGVMNTLATDGASKYDFTVQNDGEIVTLKTKATT 338
           T+A  VSLL YH    Y+   +LK++   ++TLAT+GA KYD T    G+ V L T    
Sbjct: 246 TQAEVVSLLEYHALAEYKPKGSLKTNKDAISTLATNGAGKYDLTTSTSGDEVILHTGVGP 305

Query: 339 AKITGTLKDEEPLVIYKINKVLLPIELFKPEVETEAPAPAPTPHKRKTKKDKDEAEADAP 398
           +++  T+ DE P+VI+ ++ VLLP ELF    ++ +PAPAP P    T      A++ +P
Sbjct: 306 SRLADTVVDETPVVIFTVDNVLLPAELFG---KSSSPAPAPEPVSAPTPT---PAKSPSP 359

Query: 399 VD 400
           V+
Sbjct: 360 VE 361

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SNC3|FLA4_ARATH Fasciclin-like arabinogalactan protein 4 OS=Arabidopsis thaliana GN=FLA4 PE=1 SV=1

 Score =  139 bits (349), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 110/343 (32%), Positives = 177/343 (51%), Gaps = 31/343 (9%)

Query: 62  NITRILAKHPEFSTFNHYLTVTHLAAEINRRQTITVLALDNSAMSSL---LSKQLSVYTL 118
           N+T +L+  P  S+F++ L  + +AAE++ R ++T+LA+ NS  SS    L+++L    L
Sbjct: 30  NVTAVLSSFPNLSSFSNLLVSSGIAAELSGRNSLTLLAVPNSQFSSASLDLTRRLPPSAL 89

Query: 119 RNVLSLHVLTDYFGSKKLHQITNGTALTSSMFQATGSAPGSSGYVNVT-DLKGGKVGFGA 177
            ++L  HVL  +     L +I    +  +++++A+G     SG VNVT D   G V  G+
Sbjct: 90  ADLLRFHVLLQFLSDSDLRRIPPSGSAVTTLYEASGRTFFGSGSVNVTRDPASGSVTIGS 149

Query: 178 EDNDGKLDATYVKSVAEFPYNISVLQISQV-------LNSDEAEAP-------TPGPSGL 223
                  + T +K +   P NI+VL +  +       + + E   P       +P P+G+
Sbjct: 150 PATK---NVTVLKLLETKPPNITVLTVDSLIVPTGIDITASETLTPPPTSTSLSPPPAGI 206

Query: 224 NLTAIMAK-QGCKAFADLLIATGAHTTFEENLDG-GLTVFCPTDAVVNDFMPKYKNLTE- 280
           NLT I+           LL+A+G  T FE +  G G+TVF PTD+  +D +P   NL   
Sbjct: 207 NLTQILINGHNFNVALSLLVASGVITEFENDERGAGITVFVPTDSAFSD-LPSNVNLQSL 265

Query: 281 --AHKVSLLLYHGTPVYQSLQTLKS-SNGVMNTLATD--GASKYDFTVQN-DGEIVTLKT 334
               K  +L +H    Y +L +L+S +N V  TLAT+  GA  Y   +   +G IVT+ +
Sbjct: 266 PAEQKAFVLKFHVLHSYYTLGSLESITNPVQPTLATEEMGAGSYTLNISRVNGSIVTINS 325

Query: 335 KATTAKITGTLKDEEPLVIYKINKVLLPIELFKPEVETEAPAP 377
               A +T T  D+ P+ ++ ++KVLLP ELF    +  A AP
Sbjct: 326 GVVLAVVTQTAFDQNPVSVFGVSKVLLPKELFPKSGQPVATAP 368

May be a cell surface adhesion protein that is required for normal cell expansion.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LTW9|FLA14_ARATH Fasciclin-like arabinogalactan protein 14 OS=Arabidopsis thaliana GN=FLA14 PE=2 SV=1

 Score =  133 bits (334), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 70/156 (44%), Positives = 101/156 (64%), Gaps = 2/156 (1%)

Query: 56  TTSHAHNITRILAKHPEFSTFNHYLTVTHLAAEINRRQTITVLALDNSAMSSLLSKQLSV 115
           T+S++ NIT IL +H +FS FN  L+ T LA+ IN+RQTITVL + N A+SSL  +  SV
Sbjct: 19  TSSNSFNITNILNEHDDFSNFNQLLSETQLASTINKRQTITVLVVSNGALSSLSGQPTSV 78

Query: 116 YTLRNVLSLHVLTDYFGSKKLHQITNGTALTSSMFQATGSAPGSSGYVNVTDLKGGKVGF 175
             ++ +LSLH++ DY+  KKL  ++  T L +++FQ++G A G  G++N T +K G V F
Sbjct: 79  --IKKILSLHIVLDYYDQKKLKNLSKKTVLLTTLFQSSGLARGQQGFLNATVMKNGDVAF 136

Query: 176 GAEDNDGKLDATYVKSVAEFPYNISVLQISQVLNSD 211
           G+      LDA    +VA  P+NISVL IS  +  D
Sbjct: 137 GSAVPGSSLDAQLQDTVAALPFNISVLHISSAIMID 172

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZQ23|FLA3_ARATH Fasciclin-like arabinogalactan protein 3 OS=Arabidopsis thaliana GN=FLA3 PE=2 SV=1

 Score =  112 bits (280), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 65/161 (40%), Positives = 94/161 (58%), Gaps = 3/161 (1%)

Query: 45  LFPLLVLLLSSTTSHAHNITRILAKHPEFSTFNHYLTVTHLAAEINRRQTITVLALDNSA 104
           L  L +LL  S+   A NITR+L K+PEFST    L  T L   IN+RQTITVLAL+N A
Sbjct: 9   LLCLTILLAVSSIVSAVNITRVLEKYPEFSTMTELLAKTELTPIINKRQTITVLALNNDA 68

Query: 105 MSSLLSKQLSVYTLRNVLSLHVLTDYFGSKKLHQITNGTALTSSMFQATGSAPGSSGYVN 164
           + S+  +      ++N+L  HV+ DYF   KL  +   + L ++++Q+TG     +G++N
Sbjct: 69  IGSISGRPEE--EVKNILMNHVVLDYFDELKLKALKEKSTLLTTLYQSTGLGQQQNGFLN 126

Query: 165 VTDLKGGKVGFGAEDNDGKLDATYVKSVAEFPYNISVLQIS 205
            T    GK+ FG+        A Y+ +V   PYN+SV+QIS
Sbjct: 127 CTK-SNGKIYFGSGVKGAPQTAEYITTVFRNPYNLSVVQIS 166

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

>sp|O49586|FLA5_ARATH Fasciclin-like arabinogalactan protein 5 OS=Arabidopsis thaliana GN=FLA5 PE=2 SV=1

 Score =  103 bits (256), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 57/146 (39%), Positives = 90/146 (61%), Gaps = 3/146 (2%)

Query: 60  AHNITRILAKHPEFSTFNHYLTVTHLAAEINRRQTITVLALDNSAMSSLLSKQLSVYTLR 119
           A+NIT    K+ +FST       T L A I++ QTITVLA+ N A+SS+ ++  S   LR
Sbjct: 24  ANNITLAFQKYSKFSTMRDLFIKTKLIAAIDKYQTITVLAVSNDAISSITNR--SEVELR 81

Query: 120 NVLSLHVLTDYFGSKKLHQITNGTALTSSMFQATGSAPGSSGYVNVTDLKGGKVGFGAED 179
           N+L  HV+ DY+   KL  +   + + ++++Q TG     +G++NV+  K G+V FG+E 
Sbjct: 82  NILMTHVILDYYDELKLQGMREKSIMLTTLYQTTGLGEQMNGFLNVSKSK-GRVYFGSEV 140

Query: 180 NDGKLDATYVKSVAEFPYNISVLQIS 205
            +  L+A YV +V   PYN+S++QI+
Sbjct: 141 KNSPLNAEYVSTVYHNPYNLSIIQIT 166

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8LEJ6|FLA11_ARATH Fasciclin-like arabinogalactan protein 11 OS=Arabidopsis thaliana GN=FLA11 PE=2 SV=2

 Score = 87.4 bits (215), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/181 (32%), Positives = 95/181 (52%), Gaps = 11/181 (6%)

Query: 207 VLNSDEAEAPTPGPSG-LNLTAIMAKQG-CKAFADLLIATGA----HTTFEENLDGGLTV 260
           V+ +   +AP PGPSG  N+TAI+ K G    F  LL +T A    +T    +   GLTV
Sbjct: 18  VIATTYGQAPAPGPSGPTNITAILEKAGQFTLFIRLLKSTQASDQINTQLNSSSSNGLTV 77

Query: 261 FCPTDAVVNDFMPKYKN-LTEAHKVSLLLYHGTPVYQSLQTLKSSNGVMNTLATDGAS-K 318
           F PTD   N       N L++  KV L+ +H  P   ++   ++ +  + T A DG + K
Sbjct: 78  FAPTDNAFNSLKSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQTVSNPLRTQAGDGQNGK 137

Query: 319 YDFTVQNDGEIVTLKTKATTAKITGTLKDEEPLVIYKINKVLLPIELFKPEVETEAPAPA 378
           +   + + G  V + T   +A +  ++  ++ L +Y++++VLLP+ +F   V   APAPA
Sbjct: 138 FPLNITSSGNQVNITTGVVSATVANSVYSDKQLAVYQVDQVLLPLAMFGSSV---APAPA 194

Query: 379 P 379
           P
Sbjct: 195 P 195

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SIL7|FLA6_ARATH Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis thaliana GN=FLA6 PE=2 SV=2

 Score = 84.3 bits (207), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 112/243 (46%), Gaps = 18/243 (7%)

Query: 199 ISVLQISQVLNSDEAEAPTPGPSGLNLTAIM-AKQGCKAFADLLIAT--GAHTTFEENL- 254
           I +  I  + +   A APT   S +NLTAI+ A         LL  T  G   + + N  
Sbjct: 13  IFLFTIPYIQSQPTAPAPTTEKSPINLTAILEAGHQFTTLIQLLNTTQVGFQVSVQLNSS 72

Query: 255 DGGLTVFCPTDAVVNDFMPKYKN-LTEAHKVSLLLYHGTPVYQSLQTLKSSNGVMNTLAT 313
           D G+T+F PTD   N   P   N LT   ++ L+LYH  P Y SL  L  ++  + T AT
Sbjct: 73  DQGMTIFAPTDNAFNKLKPGTLNSLTYQQQIQLMLYHIIPKYYSLSDLLLASNPVRTQAT 132

Query: 314 D---GASKYDFTVQNDGEIVTLKTKATTAKITGTLKDEEPLVIYKINKVLLPIELFKPEV 370
               G    +FT Q     V + T     +I   L+ + PL +Y ++ VLLP ELF  + 
Sbjct: 133 GQDGGVFGLNFTGQAQSNQVNVSTGVVETRINNALRQQFPLAVYVVDSVLLPEELFGTKT 192

Query: 371 ETEAPAPAPTPHKRKTKKDKDEAEADAPVDDSEDQTADNENGVGRISGGHLIWMVLSSCM 430
            T   APAP       K     ++AD+P  D E ++A +   V R S G ++   L  C 
Sbjct: 193 -TPTGAPAP-------KSSTSSSDADSPAADDEHKSAGSS--VKRTSLGIVVSFALFCCS 242

Query: 431 GIF 433
            I+
Sbjct: 243 VIY 245

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	435
219810208	397	fascilin-like arabinogalactan protein [G	0.866	0.949	0.753	1e-159
157273672	398	fasciclin-like arabinogalactan protein 1	0.866	0.947	0.750	1e-159
224129194	344	fasciclin-like arabinogalactan protein [	0.774	0.979	0.775	1e-151
356554296	407	PREDICTED: fasciclin-like arabinogalacta	0.859	0.918	0.657	1e-138
84468390	418	putative fasciclin-like arabinogalactan	0.901	0.937	0.647	1e-137
449462393	415	PREDICTED: fasciclin-like arabinogalacta	0.887	0.930	0.619	1e-136
225447531	407	PREDICTED: fasciclin-like arabinogalacta	0.917	0.980	0.636	1e-134
357495517	421	Fasciclin-like arabinogalactan protein [	0.882	0.912	0.632	1e-133
338777050	433	fasciclin-like arabinogalactan 2 [Pisum	0.862	0.866	0.610	1e-132
147798736	407	hypothetical protein VITISV_012919 [Viti	0.901	0.963	0.641	1e-132

>gi|219810208|gb|ACL36352.1| fascilin-like arabinogalactan protein [Gossypium hirsutum]

 Score =  568 bits (1463), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 290/385 (75%), Positives = 335/385 (87%), Gaps = 8/385 (2%)

Query: 56  TTSHAHNITRILAKHPEFSTFNHYLTVTHLAAEINRRQTITVLALDNSAMSSLLSKQLSV 115
           +TS+AHNITRILAK+PEFSTFNHYLT+THLA+EINRR+TITVLAL+N+AMSSLLSKQLS+
Sbjct: 16  STSNAHNITRILAKNPEFSTFNHYLTLTHLASEINRRETITVLALNNAAMSSLLSKQLSL 75

Query: 116 YTLRNVLSLHVLTDYFGSKKLHQITNGTALTSSMFQATGSAPGSSGYVNVTDLKGGKVGF 175
           YTL+NVLSLHVL DYFGSKKLHQITNGTALTS+MFQA+G+APGSSGY+N+TDLKGGKVGF
Sbjct: 76  YTLKNVLSLHVLVDYFGSKKLHQITNGTALTSTMFQASGAAPGSSGYINITDLKGGKVGF 135

Query: 176 GAEDNDGKLDATYVKSVAEFPYNISVLQISQVLNSDEAEAPTPGPSGLNLTAIMAKQGCK 235
           GAE+NDG LDA YVKSVAE PYNISVLQISQVLNS EAEAPT  PS LNLT IM+KQGCK
Sbjct: 136 GAENNDGNLDAVYVKSVAEIPYNISVLQISQVLNSAEAEAPTAEPSKLNLTEIMSKQGCK 195

Query: 236 AFADLLIATGAHTTFEENLDGGLTVFCPTDAVVNDFMPKYKNLTEAHKVSLLLYHGTPVY 295
           AFADLLI++GA  TF EN+DGGLTVFCPTD V+ DFMPKYKNLT + K SLLLYHG PVY
Sbjct: 196 AFADLLISSGADATFNENIDGGLTVFCPTDPVIKDFMPKYKNLTASKKASLLLYHGVPVY 255

Query: 296 QSLQTLKSSNGVMNTLATDGASKYDFTVQNDGEIVTLKTKATTAKITGTLKDEEPLVIYK 355
           QS+Q LKS+NG+MNTLATDGA+KYDFT+QNDGE+VTL+TK  TAKITGTLKDEEPL++YK
Sbjct: 256 QSMQMLKSNNGIMNTLATDGANKYDFTIQNDGEVVTLETKVMTAKITGTLKDEEPLIVYK 315

Query: 356 INKVLLPIELFKPEVETEAPAPAPTPHKRKTK---KDKDEAEADAPV--DDSEDQTADNE 410
           INKVLLP EL+KP    EAPA +P P K K+K   K  D  E+DAP   D ++DQTADN+
Sbjct: 316 INKVLLPRELYKP---VEAPAESPKPSKSKSKSKHKVADAPESDAPAESDPADDQTADND 372

Query: 411 NGVGRISGGHLIWMVLSSCMGIFFI 435
           +GV  + G  L+ M+LS C+G+  +
Sbjct: 373 SGVAGLDGRRLVMMMLSLCIGVLLM 397

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|157273672|gb|ABV27490.1| fasciclin-like arabinogalactan protein 19 [Gossypium hirsutum]

 Score =  566 bits (1459), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 289/385 (75%), Positives = 335/385 (87%), Gaps = 8/385 (2%)

Query: 56  TTSHAHNITRILAKHPEFSTFNHYLTVTHLAAEINRRQTITVLALDNSAMSSLLSKQLSV 115
           +TS+AHNITRILAKHPEFSTFNHYLT+THLA+EINRR+TITVLAL+N+AMSSLLSKQLS+
Sbjct: 17  STSNAHNITRILAKHPEFSTFNHYLTLTHLASEINRRETITVLALNNAAMSSLLSKQLSL 76

Query: 116 YTLRNVLSLHVLTDYFGSKKLHQITNGTALTSSMFQATGSAPGSSGYVNVTDLKGGKVGF 175
           YTL+NVLSLHVL DYFGSKKLHQITNGTALTS+MFQA+G+APGSSGY+N+TDLKGGKVGF
Sbjct: 77  YTLKNVLSLHVLVDYFGSKKLHQITNGTALTSTMFQASGAAPGSSGYINITDLKGGKVGF 136

Query: 176 GAEDNDGKLDATYVKSVAEFPYNISVLQISQVLNSDEAEAPTPGPSGLNLTAIMAKQGCK 235
           GAE+NDG LDA YVKSVAE PYNISVLQISQVLNS EAEAPT  PS LNLT IM+KQGCK
Sbjct: 137 GAENNDGNLDAVYVKSVAEIPYNISVLQISQVLNSAEAEAPTAEPSKLNLTEIMSKQGCK 196

Query: 236 AFADLLIATGAHTTFEENLDGGLTVFCPTDAVVNDFMPKYKNLTEAHKVSLLLYHGTPVY 295
           +FADLLI++GA  TF EN+DGGLTVFCPTD V+ DFMPKYKNLT + K SLLLYHG PVY
Sbjct: 197 SFADLLISSGADATFNENIDGGLTVFCPTDPVIKDFMPKYKNLTASKKASLLLYHGVPVY 256

Query: 296 QSLQTLKSSNGVMNTLATDGASKYDFTVQNDGEIVTLKTKATTAKITGTLKDEEPLVIYK 355
           QS+Q LKS+NG+MNTLATDGA+KYDFT+QNDGE+VTL+TK  TAKITGTLKDEEPL++YK
Sbjct: 257 QSMQMLKSNNGIMNTLATDGANKYDFTIQNDGEVVTLETKVMTAKITGTLKDEEPLIVYK 316

Query: 356 INKVLLPIELFKPEVETEAPAPAPTPHKRKTK---KDKDEAEADAPV--DDSEDQTADNE 410
           INKVLLP EL+KP    EAPA +P P K K+K   K  D  E+DAP   D ++DQTADN+
Sbjct: 317 INKVLLPRELYKP---VEAPAESPKPSKSKSKSKHKVADAPESDAPAESDPADDQTADND 373

Query: 411 NGVGRISGGHLIWMVLSSCMGIFFI 435
           +GV  + G  L+ ++LS C+G+  +
Sbjct: 374 SGVAGLDGRRLVMVMLSLCIGVLLM 398

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224129194|ref|XP_002320524.1| fasciclin-like arabinogalactan protein [Populus trichocarpa] gi|222861297|gb|EEE98839.1| fasciclin-like arabinogalactan protein [Populus trichocarpa]

 Score =  539 bits (1389), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 269/347 (77%), Positives = 302/347 (87%), Gaps = 10/347 (2%)

Query: 49  LVLLLSSTTSHAHNITRILAKHPEFSTFNHYLTVTHLAAEINRRQTITVLALDNSAMSSL 108
           LVLL S+TT +AHNITRILAKHP+FSTFNHYLTVTHLAAEINRRQTITVLALDN+AMSSL
Sbjct: 5   LVLLASTTTVNAHNITRILAKHPQFSTFNHYLTVTHLAAEINRRQTITVLALDNAAMSSL 64

Query: 109 LSKQLSVYTLRNVLSLHVLTDYFGSKKLHQITNGTALTSSMFQATGSAPGSSGYVNVTDL 168
           +SKQLSVYTLRNVLSLHVL DYFG++KLHQITNGT LT++MFQATGSAPG+SGYVN+TDL
Sbjct: 65  ISKQLSVYTLRNVLSLHVLVDYFGTRKLHQITNGTELTATMFQATGSAPGASGYVNITDL 124

Query: 169 KGGKVGFGAEDNDGKLDATYVKSVAEFPYNISVLQISQVLNSDEAEAPTPGPSGLNLTAI 228
            GGKV FGAEDNDGKL+A YVKS+ E PYNIS+LQISQ LNS EAEA       LN+TAI
Sbjct: 125 NGGKVAFGAEDNDGKLNAVYVKSLEEIPYNISILQISQPLNSAEAEA-PTAAPTLNVTAI 183

Query: 229 MAKQGCKAFADLLIATGAHTTFEENLDGGLTVFCPTDAVVNDFMPKYKNLTEAHKVSLLL 288
           ++ QGCKAF+DLLIA+GAHTTFEEN+DGGLTVFCPTD V+N FMPKYKNLT   KVSLLL
Sbjct: 184 LSNQGCKAFSDLLIASGAHTTFEENVDGGLTVFCPTDPVINGFMPKYKNLTAPQKVSLLL 243

Query: 289 YHGTPVYQSLQTLKSSNGVMNTLATDGASKYDFTVQNDGEIVTLKTKATTAKITGTLKDE 348
           YHG P+YQSLQ LK+SNG+MNTLAT+GA+KYDFTVQNDGE+VTL+TK TTA ITGT+KDE
Sbjct: 244 YHGIPIYQSLQMLKTSNGIMNTLATNGANKYDFTVQNDGEVVTLETKVTTATITGTVKDE 303

Query: 349 EPLVIYKINKVLLPIELFKPEVETEAPAPAPTPHKRKTKKDKDEAEA 395
           EPLV+YKINKVLLP ELFK   E +APAP         K +KD A+ 
Sbjct: 304 EPLVVYKINKVLLPRELFKAAPEKKAPAP---------KGEKDVADG 341

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356554296|ref|XP_003545484.1| PREDICTED: fasciclin-like arabinogalactan protein 2-like [Glycine max]

 Score =  496 bits (1278), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 252/383 (65%), Positives = 299/383 (78%), Gaps = 9/383 (2%)

Query: 60  AHNITRILAKHPEFSTFNHYLTVTHLAAEINRRQTITVLALDNSAMSSLLSKQLSVYTLR 119
           AHNITR+LA HP FSTFNHYL+VTHLA EINRRQTITVLALDN+AMSSLL K LS+ T++
Sbjct: 24  AHNITRMLAAHPGFSTFNHYLSVTHLAEEINRRQTITVLALDNAAMSSLLDKHLSLPTIK 83

Query: 120 NVLSLHVLTDYFGSKKLHQITNGTALTSSMFQATGSAPGSSGYVNVTDLKGGKVGFGAED 179
           NVLSLH+L DYFG+KKLHQI N T L SSMFQATGSA G++GYVN+T+LK GKVGF AED
Sbjct: 84  NVLSLHILVDYFGAKKLHQINNSTTLVSSMFQATGSASGTAGYVNITNLKAGKVGFAAED 143

Query: 180 NDGKLDATYVKSVAEFPYNISVLQISQVLNSDEAEAPTPGPSGLNLTAIMAKQGCKAFAD 239
           NDG L + YVKSV E PY ISVLQIS  ++S +AEAPT  PS ++L +IM+KQGCKAFAD
Sbjct: 144 NDGSLHSFYVKSVKEMPYYISVLQISAAISSADAEAPTAAPSAIDLISIMSKQGCKAFAD 203

Query: 240 LLIATGAHTTFEENLDGGLTVFCPTDAVVNDFMPKYKNLTEAHKVSLLLYHGTPVYQSLQ 299
           LL  + A  +F+EN+DGGLTVFCPTD+ V+ F PKYKNLTEA KVSLLLYH TPVY+SLQ
Sbjct: 204 LLRGSKALPSFKENVDGGLTVFCPTDSAVSGFAPKYKNLTEAQKVSLLLYHATPVYESLQ 263

Query: 300 TLKSSNGVMNTLATDGASKYDFTVQNDGEIVTLKTKATTAKITGTLKDEEPLVIYKINKV 359
            LKSSNG+MNTLAT+GA+KYDFTVQ++GE V+LKTK  TA I GTL D++P V YKIN+V
Sbjct: 264 MLKSSNGIMNTLATEGANKYDFTVQSEGEDVSLKTKVNTASIVGTLIDQDPFVAYKINRV 323

Query: 360 LLPIELFKPEVETEAPAPAPTPHKRKTKKDKDEAEADAPVD-------DSEDQTADNENG 412
           L+P ELFK     +APA +P P K+K K   +   ADAP D       DSEDQ A +E+ 
Sbjct: 324 LMPRELFKASDAADAPAQSPKPAKKKNKNKNNSHAADAPADGPSDDDADSEDQKAADEDS 383

Query: 413 VGRISGGHL-IWMVLSSCMGIFF 434
            G +SG H+  +MV  S +  F 
Sbjct: 384 NG-VSGLHVRFFMVFFSLIMAFL 405

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|84468390|dbj|BAE71278.1| putative fasciclin-like arabinogalactan protein FLA2 [Trifolium pratense]

 Score =  496 bits (1276), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 266/411 (64%), Positives = 314/411 (76%), Gaps = 19/411 (4%)

Query: 43  LLLFPL--LVLLLSSTTSHA-----HNITRILAKHPEFSTFNHYLTVTHLAAEINRRQTI 95
           L+LF L  L+ L+ STT+ A     HNITRILAKHP FSTFNHYLT+THLA EINRRQTI
Sbjct: 8   LVLFSLTLLISLIHSTTAGAATSGSHNITRILAKHPGFSTFNHYLTITHLADEINRRQTI 67

Query: 96  TVLALDNSAMSSLLSKQLSVYTLRNVLSLHVLTDYFGSKKLHQITNGTALTSSMFQATGS 155
           T+LA+DN+AMSSLL K LSV TL+NVLSLHVL DYFG+KKLHQITNGT L SSMFQATGS
Sbjct: 68  TILAIDNAAMSSLLDKHLSVSTLKNVLSLHVLVDYFGAKKLHQITNGTTLVSSMFQATGS 127

Query: 156 APGSSGYVNVTDLKGGKVGFGAEDNDGKLDATYVKSVAEFPYNISVLQISQVLNSDEAEA 215
           A G++GYVNVT+LKGGKVGF AEDNDG L + YVKS+ E PY ISVL+ISQ L+S +AEA
Sbjct: 128 AAGTAGYVNVTNLKGGKVGFAAEDNDG-LHSFYVKSIEELPYVISVLEISQPLSSADAEA 186

Query: 216 PTPGPSGLNLTAIMAKQGCKAFADLLIATGAHTTFEENLDGGLTVFCPTDAVVNDFMPKY 275
           PT  PS ++L AIM+KQGCKAFADLL  + A  TF+E +DGGLTVFCPTD+ VN F  KY
Sbjct: 187 PTAAPSDIDLIAIMSKQGCKAFADLLRVSKALPTFKETVDGGLTVFCPTDSAVNGFSAKY 246

Query: 276 KNLTEAHKVSLLLYHGTPVYQSLQTLKSSNGVMNTLATDGASKYDFTVQNDGEIVTLKTK 335
           KNLT++ KVSLLLYHG PVYQSLQ LKS+NG+MNTLAT+GA+KYDFTVQNDGE V L+TK
Sbjct: 247 KNLTDSKKVSLLLYHGVPVYQSLQMLKSNNGIMNTLATEGANKYDFTVQNDGEDVNLETK 306

Query: 336 ATTAKITGTLKDEEPLVIYKINKVLLPIELFKPEVETEAPAPAPTPHKRKTKKDKD---- 391
             TA I GTL D++P V+YKINKVL+P ELFK   E  APA +P P K+K    K     
Sbjct: 307 VNTANIIGTLIDQDPFVVYKINKVLMPRELFKGVKEDLAPAESPKPAKKKKTTKKGKAPA 366

Query: 392 -EAEADAPVD------DSEDQTADNENGVGRISGGHLIWMVLSSCMGIFFI 435
            + +AD+P D      DS+D+ A ++NGV  ++ G    MV  S    F +
Sbjct: 367 ADEDADSPADGPDADADSDDEKAADDNGVSGLNQGFRFVMVFFSLFIGFLV 417

Source: Trifolium pratense

Species: Trifolium pratense

Genus: Trifolium

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449462393|ref|XP_004148925.1| PREDICTED: fasciclin-like arabinogalactan protein 1-like [Cucumis sativus] gi|449527723|ref|XP_004170859.1| PREDICTED: fasciclin-like arabinogalactan protein 1-like [Cucumis sativus]

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 249/402 (61%), Positives = 295/402 (73%), Gaps = 16/402 (3%)

Query: 48  LLVLLLSSTTSHAHNITRILAKHPEFSTFNHYLTVTHLAAEINRRQTITVLALDNSAMSS 107
           L VL L   T+ AHNIT++L KHPEFSTFNHYLT THLA EINRR TITV  +DNSAMS 
Sbjct: 16  LAVLFLVIATATAHNITKLLEKHPEFSTFNHYLTTTHLAPEINRRTTITVCVVDNSAMSD 75

Query: 108 LLSKQLSVYTLRNVLSLHVLTDYFGSKKLHQITNGTALTSSMFQATGSAPGSSGYVNVTD 167
           LL+KQLS+Y+++N LSLHVL DYFG+KKLHQITNGTAL ++MFQATGSAPGSSG+VN+TD
Sbjct: 76  LLAKQLSIYSIKNTLSLHVLLDYFGAKKLHQITNGTALAATMFQATGSAPGSSGFVNITD 135

Query: 168 LKGGKVGFGAEDNDGKLDATYVKSVAEFPYNISVLQISQVLNSDEAEAPTPGPSGLNLTA 227
           LKGGKVGFG +D+D  +DA YVKSV E PYNIS++QIS++L S  AEAPTP PS +NLT 
Sbjct: 136 LKGGKVGFGLQDSD-DIDAMYVKSVEEVPYNISIIQISKILPSQVAEAPTPSPSEMNLTG 194

Query: 228 IMAKQGCKAFADLLIATGAHTTFEENLDGGLTVFCPTDAVVNDFMPKYKNLTEAHKVSLL 287
           IM+  GCK FA+ L A+ A  TF+EN  GGLTVFCP D V   F+PKYKNLT A K+SLL
Sbjct: 195 IMSAHGCKVFAETLQASDAVKTFQENAIGGLTVFCPLDDVFKAFLPKYKNLTAAGKISLL 254

Query: 288 LYHGTPVYQSLQTLKSSNGVMNTLATDGASKYDFTVQNDGEIVTLKTKATTAKITGTLKD 347
            YHG PVY S+  LKS+NG+ NTLATDGA+KYDF +QNDGE+VTL+TK  TAKITGTL D
Sbjct: 255 EYHGLPVYNSMSMLKSNNGITNTLATDGANKYDFVIQNDGEVVTLQTKVVTAKITGTLLD 314

Query: 348 EEPLVIYKINKVLLPIELFKPEV---------ETEAPAPAPTPHKRKTKKDKDEAEADAP 398
           E+P+ IY I+KVL P ELFK E+         ETE PA AP  H  K KK      AD+P
Sbjct: 315 EQPVAIYTIDKVLKPRELFKKEIPAPAPAPAPETEKPADAPKAHSHKHKKGAATPAADSP 374

Query: 399 VD-----DSEDQTADNENGVGRISGGHLIWMVLSSCMGIFFI 435
            D     D  DQT D  NG  R++G   +   +S    +  +
Sbjct: 375 ADSPSDEDPADQTTDG-NGAVRLNGWRFVLAGISGLAALLLL 415

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225447531|ref|XP_002267946.1| PREDICTED: fasciclin-like arabinogalactan protein 2-like [Vitis vinifera]

 Score =  483 bits (1244), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 261/410 (63%), Positives = 317/410 (77%), Gaps = 11/410 (2%)

Query: 33  MENRPLLTTNLLLFPLLVLLLSSTTSHAHNITRILAKHPEFSTFNHYLTVTHLAAEINRR 92
           M++ P+ T  LL   + +L LS  T HAHNIT ILAK+PEFSTF+HYLTVTHLA EINRR
Sbjct: 1   MQHAPVFT-RLLTLSVCLLFLSCAT-HAHNITHILAKYPEFSTFSHYLTVTHLAGEINRR 58

Query: 93  QTITVLALDNSAMSSLLSKQLSVYTLRNVLSLHVLTDYFGSKKLHQITNGTALTSSMFQA 152
           QTITVLA+ N+ M+ LLSK LSVY ++NVLSLHVL DYFG++KLHQIT+GTA ++++FQ+
Sbjct: 59  QTITVLAVSNAGMADLLSKHLSVYVIKNVLSLHVLVDYFGARKLHQITDGTASSATLFQS 118

Query: 153 TGSAPGSSGYVNVTDLKGGKVGFGAEDNDGKLDATYVKSVAEFPYNISVLQISQVLNSDE 212
           TGSAPG++G+VN+TDLK GKVGFGA+D+ G L+A +VKSV E PYNISVL+ISQ+L S  
Sbjct: 119 TGSAPGTAGFVNITDLKHGKVGFGAQDS-GHLNAYFVKSVVEIPYNISVLEISQILTSAV 177

Query: 213 AEAPTPGPSGLNLTAIMAKQGCKAFADLLIATGAHTTFEENLDGGLTVFCPTDAVVNDFM 272
           AEAP   PS LNLT +++KQGCKAF DLL A+GA  TFEEN DGGLTVFCP+D V+  FM
Sbjct: 178 AEAPAEAPS-LNLTIMLSKQGCKAFGDLLEASGAIKTFEENADGGLTVFCPSDDVIKGFM 236

Query: 273 PKYKNLTEAHKVSLLLYHGTPVYQSLQTLKSSNGVMNTLATDGASKYDFTVQNDGEIVTL 332
           PKYKNLT A KVSLLLYHG P+YQS+Q LKSSNGV NTLATDGA KYDFTVQ +GE +TL
Sbjct: 237 PKYKNLTAAGKVSLLLYHGIPIYQSMQMLKSSNGVTNTLATDGAKKYDFTVQTEGEDITL 296

Query: 333 KTKATTAKITGTLKDEEPLVIYKINKVLLPIELFKPEVE-TEAPAPAPTPHKRKTKKDKD 391
           +TK  TA++TGT+ D+EP+V+YKINKVLLP ELF+  VE  EA +P     K   K   D
Sbjct: 297 ETKVVTARVTGTVLDQEPVVLYKINKVLLPRELFEGTVEDDEAESPKAASPKSSKKSKDD 356

Query: 392 EA---EADAP-VDDSEDQTA--DNENGVGRISGGHLIWMVLSSCMGIFFI 435
            A   +AD+P  DDSED TA  D+EN  GR  GG    ++L+   G F +
Sbjct: 357 TADSPDADSPESDDSEDSTADQDDENSGGRFDGGRWASVLLTVFAGAFVL 406

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357495517|ref|XP_003618047.1| Fasciclin-like arabinogalactan protein [Medicago truncatula] gi|355519382|gb|AET01006.1| Fasciclin-like arabinogalactan protein [Medicago truncatula]

 Score =  480 bits (1235), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 260/411 (63%), Positives = 308/411 (74%), Gaps = 27/411 (6%)

Query: 43  LLLFPLLVLL--LSSTTSHA-----HNITRILAKHPEFSTFNHYLTVTHLAAEINRRQTI 95
           L+LF L ++L  + STT+ A     HNITRILAKHP FSTFNHYLT+THLA EINRRQTI
Sbjct: 9   LVLFSLTLILSLIHSTTAAAATSGNHNITRILAKHPGFSTFNHYLTITHLADEINRRQTI 68

Query: 96  TVLALDNSAMSSLLSKQLSVYTLRNVLSLHVLTDYFGSKKLHQITNGTALTSSMFQATGS 155
           T+LA+DN+AMSSLL K LS+ TL+NVLSLHVL DYFG+KKLHQIT+GT L SSMFQATGS
Sbjct: 69  TILAIDNAAMSSLLDKHLSITTLKNVLSLHVLVDYFGAKKLHQITDGTTLVSSMFQATGS 128

Query: 156 APGSSGYVNVTDLKGGKVGFGAEDNDGKLDATYVKSVAEFPYNISVLQISQVLNSDEAEA 215
           A G++GYVN+T+LKGGKVGFGAEDNDG L + YVKSV E PY ISVLQIS  L+S +AEA
Sbjct: 129 AAGTAGYVNITNLKGGKVGFGAEDNDG-LHSYYVKSVEELPYVISVLQISNPLSSADAEA 187

Query: 216 PTPGPSGLNLTAIMAKQGCKAFADLLIATGAHTTFEENLDGGLTVFCPTDAVVNDFMPKY 275
           PT  PS ++L  IM+KQGC++FADLL  + A  TF+E++DGGLTVFCPTD  V+ F  KY
Sbjct: 188 PTAAPSDIDLIGIMSKQGCQSFADLLRVSKALPTFKESVDGGLTVFCPTDTAVSGFSAKY 247

Query: 276 KNLTEAHKVSLLLYHGTPVYQSLQTLKSSNGVMNTLATDGASKYDFTVQNDGEIVTLKTK 335
           KNLT++ KVSLLLYHG PVYQSLQ LKS+NGVMNTLAT+G +KYDFTVQNDGE V L+TK
Sbjct: 248 KNLTDSQKVSLLLYHGVPVYQSLQMLKSNNGVMNTLATEGHNKYDFTVQNDGEDVNLETK 307

Query: 336 ATTAKITGTLKDEEPLVIYKINKVLLPIELFKPEVETEAPAPAPTPHKRKTKKD------ 389
             TA I GTL D++P V+YKI+KVL+P ELFK   E +  APA +P   K+K        
Sbjct: 308 VNTANIVGTLIDQDPFVVYKISKVLMPRELFKGVKEEKDLAPAESPKAAKSKAKKKKAAP 367

Query: 390 ---------KDEAEADAPVDDSEDQ-TADNENGVGRISGGHLIWMVLSSCM 430
                     D  +ADA   DS+DQ  ADNENGV  ++ G    MV  S  
Sbjct: 368 AADEDADSPADGPDADA---DSDDQKAADNENGVNGLNQGLRFIMVFFSLF 415

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|338777050|gb|AEI98736.1| fasciclin-like arabinogalactan 2 [Pisum sativum]

 Score =  477 bits (1227), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 248/406 (61%), Positives = 299/406 (73%), Gaps = 31/406 (7%)

Query: 60  AHNITRILAKHPEFSTFNHYLTVTHLAAEINRRQTITVLALDNSAMSSLLSKQLSVYTLR 119
           AHNITR+LA HP FSTFNHYL+VTHLA EINRRQTITVLALDN+AMSSLL K LS+ T++
Sbjct: 24  AHNITRMLAAHPGFSTFNHYLSVTHLAEEINRRQTITVLALDNAAMSSLLDKHLSLPTIK 83

Query: 120 NVLSLHVLTDYFGSKKLHQITNGTALTSSMFQATGSAPGSSGYVNVTDLKGGKVGFGAED 179
           NVLSLH+L DYFG+KKLHQI N T L SSMFQATGSA G++GYVN+T+LK GKVGF AED
Sbjct: 84  NVLSLHILVDYFGAKKLHQINNSTTLVSSMFQATGSASGTAGYVNITNLKAGKVGFAAED 143

Query: 180 NDGKLDATYVKSVAEFPYNISVLQISQVLNSDEAEAPTPGPSGLNLTAIMAKQGCKAFAD 239
           NDG L + YVKSV E PY ISVLQIS  ++S +AEAPT  PS ++L +IM+KQGCKAFAD
Sbjct: 144 NDGSLHSFYVKSVQEMPYYISVLQISAAISSADAEAPTAAPSAIDLISIMSKQGCKAFAD 203

Query: 240 LLIATGAHTTFEENLDGGLTVFCPTDAVVNDFMPKYKNLTEAHKVSLLLYHGTPVYQSLQ 299
           LL  + A   F+EN+DGGLTVFCPTD+ ++ F PKYKNLTEA KVSLLLYH TPVY+SLQ
Sbjct: 204 LLRGSKALPAFKENVDGGLTVFCPTDSAISGFAPKYKNLTEAQKVSLLLYHATPVYESLQ 263

Query: 300 TLKSSNGVMNTLATDGASKYDFTVQNDGEIV--------------------TLKTKATTA 339
            LKSSNG+MNTLAT+GA+KYDFTV+++GE V                    +LKTK  TA
Sbjct: 264 MLKSSNGIMNTLATEGANKYDFTVKSEGEDVSLKTKVNTASIVGTLIDQDPSLKTKVNTA 323

Query: 340 KITGTLKDEEPLVIYKINKVLLPIELFKP-EVETEAPAPAPTPHKRKTKKDKDEAEADAP 398
            I GTL D++P V YKIN+VL+P ELFK  +   +APA +P P KRK    K  A++DA 
Sbjct: 324 SIVGTLIDQDPFVAYKINRVLMPRELFKASDALDQAPAESPKPAKRKKNAKKGSADSDAA 383

Query: 399 V-------DDSEDQTADNENGVGRISGGH--LIWMVLSSCMGIFFI 435
                   DDSEDQ A +++  G +SG H  L+ ++    MG   +
Sbjct: 384 DAPADGPSDDSEDQKAADQDSNG-VSGLHVRLVMVLFGLIMGFLVL 428

Source: Pisum sativum

Species: Pisum sativum

Genus: Pisum

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147798736|emb|CAN61077.1| hypothetical protein VITISV_012919 [Vitis vinifera]

 Score =  477 bits (1227), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 258/402 (64%), Positives = 311/402 (77%), Gaps = 10/402 (2%)

Query: 41  TNLLLFPLLVLLLSSTTSHAHNITRILAKHPEFSTFNHYLTVTHLAAEINRRQTITVLAL 100
           T LL   + +L LS  T HAHNIT ILAK+PEFSTF+HYLTVTHLA EINRRQTITVLA+
Sbjct: 8   TRLLTLSVCLLFLSCXT-HAHNITHILAKYPEFSTFSHYLTVTHLAGEINRRQTITVLAV 66

Query: 101 DNSAMSSLLSKQLSVYTLRNVLSLHVLTDYFGSKKLHQITNGTALTSSMFQATGSAPGSS 160
            N+ M+ LLSK LSVY ++NVLSLHVL DYFG++KLHQIT+GTA ++++FQ+TGSAPG++
Sbjct: 67  SNAGMADLLSKHLSVYVIKNVLSLHVLVDYFGARKLHQITDGTASSATLFQSTGSAPGTA 126

Query: 161 GYVNVTDLKGGKVGFGAEDNDGKLDATYVKSVAEFPYNISVLQISQVLNSDEAEAPTPGP 220
           G+VN+TDLK GKVGFGA+D+ G L+A +VKSV E PYNISVL+ISQ+L S  AEAP   P
Sbjct: 127 GFVNITDLKHGKVGFGAQDS-GHLNAYFVKSVVEIPYNISVLEISQILTSAVAEAPAEAP 185

Query: 221 SGLNLTAIMAKQGCKAFADLLIATGAHTTFEENLDGGLTVFCPTDAVVNDFMPKYKNLTE 280
           S LNLT +++KQGCKAF DLL A+GA  TFEEN DGGLTVF P+D V+  FMPKYKNLT 
Sbjct: 186 S-LNLTIMLSKQGCKAFGDLLEASGAIKTFEENADGGLTVFXPSDDVIKGFMPKYKNLTA 244

Query: 281 AHKVSLLLYHGTPVYQSLQTLKSSNGVMNTLATDGASKYDFTVQNDGEIVTLKTKATTAK 340
           A KVSLLLYHG P+YQS+Q LKSSNG+ NTLATDGA KYDFTVQ +GE +TL+TK  TA+
Sbjct: 245 AGKVSLLLYHGIPIYQSMQMLKSSNGLTNTLATDGAKKYDFTVQTEGEDITLETKVVTAR 304

Query: 341 ITGTLKDEEPLVIYKINKVLLPIELFKPEVE-TEAPAPAPTPHKRKTKKDKDEA---EAD 396
           +TGT+ D+EP+V+YKINKVLLP ELFK  VE  EA +P     K   K   D A   +AD
Sbjct: 305 VTGTVLDQEPVVLYKINKVLLPRELFKGTVEDDEAESPKAASPKSSKKSKDDTADSPDAD 364

Query: 397 AP-VDDSEDQTA--DNENGVGRISGGHLIWMVLSSCMGIFFI 435
           +P  DDSED TA  D+EN  GR  GG    ++L+   G F +
Sbjct: 365 SPESDDSEDSTADQDDENSGGRFDGGRWASVLLTVFAGAFVL 406

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	435
TAIR|locus:2135818	403	FLA2 "FASCICLIN-like arabinoga	0.864	0.933	0.563	4.8e-110
TAIR|locus:2162197	424	FLA1 "FASCICLIN-like arabinoga	0.705	0.724	0.580	1.8e-94
TAIR|locus:2101841	422	FLA10 "FASCICLIN-like arabinog	0.698	0.720	0.487	1.4e-69
TAIR|locus:2050822	420	FLA8 "FASCICLIN-like arabinoga	0.701	0.726	0.461	5.6e-68
TAIR|locus:2087715	255	FLA14 "AT3G12660" [Arabidopsis	0.367	0.627	0.439	1.4e-30
TAIR|locus:2128201	278	FLA5 "AT4G31370" [Arabidopsis	0.328	0.514	0.390	4.4e-25
TAIR|locus:2061107	280	FLA3 "AT2G24450" [Arabidopsis	0.363	0.564	0.385	6.8e-24
TAIR|locus:2075185	420	SOS5 "salt overly sensitive 5"	0.443	0.459	0.308	3.5e-15
TAIR|locus:2143443	246	FLA11 "FASCICLIN-like arabinog	0.367	0.650	0.297	1.8e-14
TAIR|locus:2049218	254	FLA7 "FASCICLIN-like arabinoog	0.342	0.586	0.301	9.5e-13

TAIR|locus:2135818 FLA2 "FASCICLIN-like arabinogalactan 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 1087 (387.7 bits), Expect = 4.8e-110, P = 4.8e-110
 Identities = 214/380 (56%), Positives = 271/380 (71%)

Query:    59 HAHNITRILAKHPEFSTFNHYLTVTHLAAEINRRQTITVLALDNSAMSSLLSKQLSVYTL 118
             +AHNITRILAK P+FSTFNHYL+ THLA EINRRQTITVLA+DNSAMSS+LS   S+Y +
Sbjct:    25 NAHNITRILAKDPDFSTFNHYLSATHLADEINRRQTITVLAVDNSAMSSILSNGYSLYQI 84

Query:   119 RNVLSLHVLTDYFGSKKLHQITNGTALTSSMFQATGSAPGSSGYVNVTDLKGGKVGFGAE 178
             RN+LSLHVL DYFG+KKLHQIT+G+  T+SMFQ+TGSA G+SGY+N+TD+KGGKV FG +
Sbjct:    85 RNILSLHVLVDYFGTKKLHQITDGSTSTASMFQSTGSATGTSGYINITDIKGGKVAFGVQ 144

Query:   179 DNDGKLDATYVKSVAEFPYNISVLQISQVLNSDEAEAPTPGPSGLNLTAIMAKQGCKAFA 238
             D+D KL A YVKSV E PYNISVL ISQVL S EAEAPT  PS L LT I+ KQGCKAF+
Sbjct:   145 DDDSKLTAHYVKSVFEKPYNISVLHISQVLTSPEAEAPTASPSDLILTTILEKQGCKAFS 204

Query:   239 DLLIATGAHTTFEENLDGGLTVFCPTDAVVNDFMPKYKNLTEAHKVSLLLYHGTPVYQSL 298
             D+L +TGA  TF++ +DGGLTVFCP+D+ V  FMPK+K+L+ A+K +L+LYHG PVYQSL
Sbjct:   205 DILKSTGADKTFQDTVDGGLTVFCPSDSAVGKFMPKFKSLSPANKTALVLYHGMPVYQSL 264

Query:   299 QTLKSSNGVMNTLATDGASKYDFTVQNDGEIVXXXXXXXXXXXXXXXXDEEPLVIYKINK 358
             Q L+S NG +NTLAT+G +K+DFTVQNDGE V                D+EPL++YKI+K
Sbjct:   265 QMLRSGNGAVNTLATEGNNKFDFTVQNDGEDVTLETDVVTAKVMGTLKDQEPLIVYKIDK 324

Query:   359 VLLPIELFKXXXXXXXXXXXXXXHKRKTXXXXXXXXXXXXXXXXXXQTADNENGV--GRI 416
             VLLP E++K               K K                   + AD++NG     I
Sbjct:   325 VLLPREIYKAVKTSAPAPKSSKK-KPKNAEADADGPSADAPSDDDVEVADDKNGAVSAMI 383

Query:   417 SG-GHLIWMVLSSCMGIFFI 435
             +   +++  ++  C G++ +
Sbjct:   384 TRTSNVVTAIVGLCFGVWLM 403

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0006084 "acetyl-CoA metabolic process" evidence=RCA

GO:0006816 "calcium ion transport" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

TAIR|locus:2162197 FLA1 "FASCICLIN-like arabinogalactan 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 940 (336.0 bits), Expect = 1.8e-94, P = 1.8e-94
 Identities = 180/310 (58%), Positives = 233/310 (75%)

Query:    59 HAHNITRILAKHPEFSTFNHYLTVTHLAAEINRRQTITVLALDNSAMSSLLSKQLSVYTL 118
             HAHN+TR+LA HP FS+F+H+LT THLA EINRR+TITV A+DN+AMS+L SK  ++ TL
Sbjct:    23 HAHNVTRLLANHPSFSSFSHFLTQTHLADEINRRRTITVCAVDNAAMSALTSKGYTLSTL 82

Query:   119 RNVLSLHVLTDYFGSKKLHQITNGTALTSSMFQATGSAPGSSGYVNVTDLKGGKVGFGAE 178
             +N+LSLHVL DYFG+KKLHQI +G+AL +++FQATG+APG+SG+VN+TDL+GGKVGFG +
Sbjct:    83 KNILSLHVLLDYFGTKKLHQIRDGSALAATLFQATGAAPGTSGFVNITDLRGGKVGFGPD 142

Query:   179 DNDGKLDATYVKSVAEFPYNISVLQISQVLNSDEAEAPTPGPSGLNLTAIMAKQGCKAFA 238
               D  L + +VKS+ E PYNIS++QIS+VL S+ A APTP P+ +NLT IM+  GCK FA
Sbjct:   143 GGD--LSSFFVKSIEEVPYNISIIQISRVLPSETAAAPTPAPAEMNLTGIMSAHGCKVFA 200

Query:   239 DLLIAT-GAHTTFEENLDGGLTVFCPTDAVVNDFMPKYKNLTEAHKVSLLLYHGTPVYQS 297
             + L+   GA  T++E+L+GG+TVFCP D  +  F+PKYKNLT   K + L +   P Y S
Sbjct:   201 ETLLTNPGASKTYQESLEGGMTVFCPGDDAMKGFLPKYKNLTAPKKEAFLDFLAVPTYYS 260

Query:   298 LQTLKSSNGVMNTLATDGASKYDFTVQNDGEIVXXXXXXXXXXXXXXXXDEEPLVIYKIN 357
             +  LKS+NG MNTLATDGA+K++ TVQNDGE V                DE+PL IY  +
Sbjct:   261 MAMLKSNNGPMNTLATDGANKFELTVQNDGEKVTLKTRINTVKIVDTLIDEQPLAIYATD 320

Query:   358 KVLLPIELFK 367
             KVLLP ELFK
Sbjct:   321 KVLLPKELFK 330

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0005618 "cell wall" evidence=IDA

GO:0048364 "root development" evidence=IMP

GO:0048367 "shoot system development" evidence=IMP

TAIR|locus:2101841 FLA10 "FASCICLIN-like arabinogalactan-protein 10" [Arabidopsis thaliana (taxid:3702)]

 Score = 705 (253.2 bits), Expect = 1.4e-69, P = 1.4e-69
 Identities = 151/310 (48%), Positives = 203/310 (65%)

Query:    61 HNITRILAKHPEFSTFNHYLTVTHLAAEINRRQTITVLALDNSAMSSLLSKQ-LSVYTLR 119
             HNIT+IL+  PE+S+FN+YL+ T LA EIN R TITVL L+N AMSSL  K  LSV  ++
Sbjct:    26 HNITQILSDTPEYSSFNNYLSQTKLADEINSRTTITVLVLNNGAMSSLAGKHPLSV--VK 83

Query:   120 NVLSLHVLTDYFGSKKLHQITNGTALTSSMFQATGSAPGSSGYVNVTDLKGGKVGFGAED 179
             N LSL VL DY+   KLHQ++ GT LT++++Q TG A G+ G+VNVTDLKGGKVGFG+  
Sbjct:    84 NALSLLVLLDYYDPLKLHQLSKGTTLTTTLYQTTGHALGNLGFVNVTDLKGGKVGFGSAA 143

Query:   180 NDGKLDATYVKSVAEFPYNISVLQISQ-VLNSDEAEAPTPGPSGL-NLTAIMAKQGCKAF 237
                KLD++Y KSV + PYNISVL+I+  ++      AP P  +G+ N+T ++ K GCK F
Sbjct:   144 PGSKLDSSYTKSVKQIPYNISVLEINAPIIAPGILTAPAPSSAGVSNITGLLEKAGCKTF 203

Query:   238 ADLLIATGAHTTFEENLDGGLTVFCPTD-AVVNDFMPKYKNLTEAHKVSLLLYHGTPVYQ 296
             A+LL+++G   TFE  ++ GLTVF P+D A     +P   NLT+A  VSLL YH    Y+
Sbjct:   204 ANLLVSSGVIKTFESTVEKGLTVFAPSDEAFKARGVPDLTNLTQAEVVSLLEYHALAEYK 263

Query:   297 SLQTLKSSNGVMNTLATDGASKYDFTVQNDGEIVXXXXXXXXXXXXXXXXDEEPLVIYKI 356
                +LK++   ++TLAT+GA KYD T    G+ V                DE P+VI+ +
Sbjct:   264 PKGSLKTNKDAISTLATNGAGKYDLTTSTSGDEVILHTGVGPSRLADTVVDETPVVIFTV 323

Query:   357 NKVLLPIELF 366
             + VLLP ELF
Sbjct:   324 DNVLLPAELF 333

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

TAIR|locus:2050822 FLA8 "FASCICLIN-like arabinogalactan protein 8" [Arabidopsis thaliana (taxid:3702)]

 Score = 690 (248.0 bits), Expect = 5.6e-68, P = 5.6e-68
 Identities = 143/310 (46%), Positives = 204/310 (65%)

Query:    60 AHNITRILAKHPEFSTFNHYLTVTHLAAEINRRQTITVLALDNSAMSSLLSKQ-LSVYTL 118
             +HNIT+ILA  P++S+FN YL+ T LA EIN R TITVL L+N AMS+L  K  LSV  +
Sbjct:    25 SHNITQILADSPDYSSFNSYLSQTKLADEINSRTTITVLVLNNGAMSALAGKHPLSV--I 82

Query:   119 RNVLSLHVLTDYFGSKKLHQITNGTALTSSMFQATGSAPGSSGYVNVTDLKGGKVGFGAE 178
             ++ LSL VL DY+  +KLH+I+ GT L+++++Q TG+APG+ G+VN+TDLKGGKVGFG+ 
Sbjct:    83 KSALSLLVLLDYYDPQKLHKISKGTTLSTTLYQTTGNAPGNLGFVNITDLKGGKVGFGSA 142

Query:   179 DNDGKLDATYVKSVAEFPYNISVLQI-SQVLNSDEAEAPTPGPSGLNLTAIMAKQGCKAF 237
              +  KLD++Y KSV + PYNIS+L+I + ++      AP P  S  N+T ++ K GCK F
Sbjct:   143 ASGSKLDSSYTKSVKQIPYNISILEIDAPIIAPGVLTAPAPSASLSNITGLLEKAGCKTF 202

Query:   238 ADLLIATGAHTTFEENLDGGLTVFCPTD-AVVNDFMPKYKNLTEAHKVSLLLYHGTPVYQ 296
             A+LL+++G   T+E  ++ GLTVF P+D A   + +P    LT+A  VSLL YH    Y+
Sbjct:   203 ANLLVSSGVLKTYESAVEKGLTVFAPSDEAFKAEGVPDLTKLTQAEVVSLLEYHALAEYK 262

Query:   297 SLQTLKSSNGVMNTLATDGASKYDFTVQNDGEIVXXXXXXXXXXXXXXXXDEEPLVIYKI 356
                +LK++   ++TLAT+GA K+D T    G+ V                D  P+VI+ +
Sbjct:   263 PKGSLKTNKNNISTLATNGAGKFDLTTSTSGDEVILHTGVAPSRLADTVLDATPVVIFTV 322

Query:   357 NKVLLPIELF 366
             + VLLP ELF
Sbjct:   323 DNVLLPAELF 332

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

GO:0007389 "pattern specification process" evidence=RCA

GO:0008361 "regulation of cell size" evidence=RCA

GO:0009664 "plant-type cell wall organization" evidence=RCA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0009926 "auxin polar transport" evidence=RCA

GO:0010015 "root morphogenesis" evidence=RCA

GO:0040007 "growth" evidence=RCA

TAIR|locus:2087715 FLA14 "AT3G12660" [Arabidopsis thaliana (taxid:3702)]

 Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
 Identities = 72/164 (43%), Positives = 102/164 (62%)

Query:    59 HAHNITRILAKHPEFSTFNHYLTVTHLAAEINRRQTITVLALDNSAMSSLLSKQLSVYTL 118
             ++ NIT IL +H +FS FN  L+ T LA+ IN+RQTITVL + N A+SSL  +  SV  +
Sbjct:    22 NSFNITNILNEHDDFSNFNQLLSETQLASTINKRQTITVLVVSNGALSSLSGQPTSV--I 79

Query:   119 RNVLSLHVLTDYFGSKKLHQITNGTALTSSMFQATGSAPGSSGYVNVTDLKGGKVGFGAE 178
             + +LSLH++ DY+  KKL  ++  T L +++FQ++G A G  G++N T +K G V FG+ 
Sbjct:    80 KKILSLHIVLDYYDQKKLKNLSKKTVLLTTLFQSSGLARGQQGFLNATVMKNGDVAFGSA 139

Query:   179 DNDGKLDATYVKSVAEFPYNISVLQISQVLNSDEA--EAPTPGP 220
                  LDA    +VA  P+NISVL IS  +  D     APT  P
Sbjct:   140 VPGSSLDAQLQDTVAALPFNISVLHISSAIMIDVKGDNAPTASP 183

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:2128201 FLA5 "AT4G31370" [Arabidopsis thaliana (taxid:3702)]

 Score = 260 (96.6 bits), Expect = 4.4e-25, Sum P(2) = 4.4e-25
 Identities = 57/146 (39%), Positives = 90/146 (61%)

Query:    60 AHNITRILAKHPEFSTFNHYLTVTHLAAEINRRQTITVLALDNSAMSSLLSKQLSVYTLR 119
             A+NIT    K+ +FST       T L A I++ QTITVLA+ N A+SS+ ++  S   LR
Sbjct:    24 ANNITLAFQKYSKFSTMRDLFIKTKLIAAIDKYQTITVLAVSNDAISSITNR--SEVELR 81

Query:   120 NVLSLHVLTDYFGSKKLHQITNGTALTSSMFQATGSAPGSSGYVNVTDLKGGKVGFGAED 179
             N+L  HV+ DY+   KL  +   + + ++++Q TG     +G++NV+  KG +V FG+E 
Sbjct:    82 NILMTHVILDYYDELKLQGMREKSIMLTTLYQTTGLGEQMNGFLNVSKSKG-RVYFGSEV 140

Query:   180 NDGKLDATYVKSVAEFPYNISVLQIS 205
              +  L+A YV +V   PYN+S++QI+
Sbjct:   141 KNSPLNAEYVSTVYHNPYNLSIIQIT 166

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:2061107 FLA3 "AT2G24450" [Arabidopsis thaliana (taxid:3702)]

 Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
 Identities = 62/161 (38%), Positives = 92/161 (57%)

Query:    60 AHNITRILAKHPEFSTFNHYLTVTHLAAEINRRQTITVLALDNSAMSSLLSKQLSVYTLR 119
             A NITR+L K+PEFST    L  T L   IN+RQTITVLAL+N A+ S+  +      ++
Sbjct:    24 AVNITRVLEKYPEFSTMTELLAKTELTPIINKRQTITVLALNNDAIGSISGRPEE--EVK 81

Query:   120 NVLSLHVLTDYFGSKKLHQITNGTALTSSMFQATGSAPGSSGYVNVTDLKGGKVGFGAED 179
             N+L  HV+ DYF   KL  +   + L ++++Q+TG     +G++N T    GK+ FG+  
Sbjct:    82 NILMNHVVLDYFDELKLKALKEKSTLLTTLYQSTGLGQQQNGFLNCTK-SNGKIYFGSGV 140

Query:   180 NDGKLDATYVKSVAEFPYNISVLQISQVLNSDEAEAPTPGP 220
                   A Y+ +V   PYN+SV+QIS  + +    +P   P
Sbjct:   141 KGAPQTAEYITTVFRNPYNLSVVQISMPIVAPGLGSPVKVP 181

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0031225 "anchored to membrane" evidence=TAS

GO:0009827 "plant-type cell wall modification" evidence=RCA

TAIR|locus:2075185 SOS5 "salt overly sensitive 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 215 (80.7 bits), Expect = 3.5e-15, P = 3.5e-15
 Identities = 67/217 (30%), Positives = 112/217 (51%)

Query:    60 AHNITRILAKHPEFSTFNHYLTVTHLAAEINRRQTITVLALDNSAMSSL---LSKQLSVY 116
             A N+T +L+  P  S+F++ L  + +AAE++ R ++T+LA+ NS  SS    L+++L   
Sbjct:    28 AINVTAVLSSFPNLSSFSNLLVSSGIAAELSGRNSLTLLAVPNSQFSSASLDLTRRLPPS 87

Query:   117 TLRNVLSLHVLTDYFGSKKLHQIT-NGTALTSSMFQATGSAPGSSGYVNVT-DLKGGKVG 174
              L ++L  HVL  +     L +I  +G+A+T+ +++A+G     SG VNVT D   G V 
Sbjct:    88 ALADLLRFHVLLQFLSDSDLRRIPPSGSAVTT-LYEASGRTFFGSGSVNVTRDPASGSVT 146

Query:   175 FGAEDNDGKLDATYVKSVAEFPYNISVLQISQVL-------NSDEAEAP-------TPGP 220
              G+       + T +K +   P NI+VL +  ++        + E   P       +P P
Sbjct:   147 IGSPATK---NVTVLKLLETKPPNITVLTVDSLIVPTGIDITASETLTPPPTSTSLSPPP 203

Query:   221 SGLNLTAIMAK-QGCKAFADLLIATGAHTTFEENLDG 256
             +G+NLT I+           LL+A+G  T FE +  G
Sbjct:   204 AGINLTQILINGHNFNVALSLLVASGVITEFENDERG 240

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0007155 "cell adhesion" evidence=ISS

GO:0009651 "response to salt stress" evidence=IMP

GO:0009825 "multidimensional cell growth" evidence=IMP

GO:0009897 "external side of plasma membrane" evidence=IDA

GO:0030247 "polysaccharide binding" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

TAIR|locus:2143443 FLA11 "FASCICLIN-like arabinogalactan-protein 11" [Arabidopsis thaliana (taxid:3702)]

 Score = 190 (71.9 bits), Expect = 1.8e-14, P = 1.8e-14
 Identities = 50/168 (29%), Positives = 81/168 (48%)

Query:   207 VLNSDEAEAPTPGPSG-LNLTAIMAKQG-CKAFADLLIATGA----HTTFEENLDGGLTV 260
             V+ +   +AP PGPSG  N+TAI+ K G    F  LL +T A    +T    +   GLTV
Sbjct:    18 VIATTYGQAPAPGPSGPTNITAILEKAGQFTLFIRLLKSTQASDQINTQLNSSSSNGLTV 77

Query:   261 FCPTDAVVNDFMPKYKN-LTEAHKVSLLLYHGTPVYQSLQTLKSSNGVMNTLATDGAS-K 318
             F PTD   N       N L++  KV L+ +H  P   ++   ++ +  + T A DG + K
Sbjct:    78 FAPTDNAFNSLKSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQTVSNPLRTQAGDGQNGK 137

Query:   319 YDFTVQNDGEIVXXXXXXXXXXXXXXXXDEEPLVIYKINKVLLPIELF 366
             +   + + G  V                 ++ L +Y++++VLLP+ +F
Sbjct:   138 FPLNITSSGNQVNITTGVVSATVANSVYSDKQLAVYQVDQVLLPLAMF 185

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0009834 "secondary cell wall biogenesis" evidence=IMP

TAIR|locus:2049218 FLA7 "FASCICLIN-like arabinoogalactan 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 182 (69.1 bits), Expect = 9.5e-13, P = 9.5e-13
 Identities = 48/159 (30%), Positives = 73/159 (45%)

Query:   215 APTPGPSGLNLTAIMAKQG-CKAFADLLIATGAHTTFEE---NLDGGLTVFCPTD-AVVN 269
             AP P P  +NLT +++  G    F D L++TG   TF+    N + G+T+F P D A   
Sbjct:    37 APAPAPENVNLTELLSVAGPFHTFLDYLLSTGVIETFQNQANNTEEGITIFVPKDDAFKA 96

Query:   270 DFMPKYKNLTEAHKVSLLLYHGTPVYQSLQTLK--SSNGVMNTLATDGASKYDFTVQNDG 327
                P   NLT+     L+L+H  P Y SL   K  S +G ++T A     +Y     +  
Sbjct:    97 QKNPPLSNLTKDQLKQLVLFHALPHYYSLSEFKNLSQSGPVSTFA---GGQYSLKFTDVS 153

Query:   328 EIVXXXXXXXXXXXXXXXXDEEPLVIYKINKVLLPIELF 366
               V                  +P+ +Y++N+VLLP  +F
Sbjct:   154 GTVRIDSLWTRTKVSSSVFSTDPVAVYQVNRVLLPEAIF 192

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0006084 "acetyl-CoA metabolic process" evidence=RCA

GO:0009664 "plant-type cell wall organization" evidence=RCA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9SU13	FLA2_ARATH	No assigned EC number	0.5876	0.9057	0.9776	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	435
smart00554	97	smart00554, FAS1, Four repeated domains in the Fas	9e-13
pfam02469	123	pfam02469, Fasciclin, Fasciclin domain	1e-12
pfam02469	123	pfam02469, Fasciclin, Fasciclin domain	2e-04
PRK14520	155	PRK14520, rpsP, 30S ribosomal protein S16; Provisi	0.004

>gnl|CDD|214719 smart00554, FAS1, Four repeated domains in the Fasciclin I family of proteins, present in many other contexts

 Score = 63.5 bits (155), Expect = 9e-13
 Identities = 32/104 (30%), Positives = 41/104 (39%), Gaps = 8/104 (7%)

Query: 259 TVFCPTDAVVNDFMPKYKNLTEAHKVSLLLYHGTPVYQSLQTLKSSNGVMNTLATDGASK 318
           TVF PTD       P   +L      +LLLYH  P   S   L +      TL T   SK
Sbjct: 1   TVFAPTDEAFQKLPPDLNSLLADKLKNLLLYHVVPGRLSSADLLNG----GTLPTLAGSK 56

Query: 319 YDFTVQNDGEIVTLKTKATTAKITGTLKDEEPLVIYKINKVLLP 362
              T       VT+      A+I          V++ I++VLLP
Sbjct: 57  LRITRSGGSGTVTVN----GARIVEADIAATNGVVHVIDRVLLP 96

Length = 97

>gnl|CDD|217054 pfam02469, Fasciclin, Fasciclin domain

 Score = 64.2 bits (157), Expect = 1e-12
 Identities = 38/133 (28%), Positives = 51/133 (38%), Gaps = 14/133 (10%)

Query: 233 GCKAFADLLIATGAHTTFEENLDGGLTVFCPTDAVVNDFMPKYKN---LTEAHKVSLLLY 289
           G   F  LL A G   T   +  G  TVF PTD           N     +    +LL Y
Sbjct: 2   GFSTFVALLKAAGLVDTLNGS-QGPFTVFAPTDEAFAKLPAGTLNFLLKDKEQLKNLLKY 60

Query: 290 HGTPVYQSLQTLKSSNGVMNTLATDGASKYDFTVQNDGEIVTLKTKATTAKITGTLKDEE 349
           H  P   +   LK+  G + TL           V   G  VT+      A++  +  +  
Sbjct: 61  HVVPGRLTSSDLKN-GGTLATLQGS-----KLRVNVTGGTVTV----NGARVVQSDIEAT 110

Query: 350 PLVIYKINKVLLP 362
             VI+ I+KVLLP
Sbjct: 111 NGVIHVIDKVLLP 123

This extracellular domain is found repeated four times in grasshopper fasciclin I as well as in proteins from mammals, sea urchins, plants, yeast and bacteria. Length = 123

>gnl|CDD|217054 pfam02469, Fasciclin, Fasciclin domain

 Score = 40.7 bits (96), Expect = 2e-04
 Identities = 30/103 (29%), Positives = 40/103 (38%), Gaps = 17/103 (16%)

Query: 71  PEFSTFNHYLTVTHLAAEINRRQ-TITVLALDNSAMSSLLSKQLSV-----YTLRNVLSL 124
           P FSTF   L    L   +N  Q   TV A  + A + L +  L+        L+N+L  
Sbjct: 1   PGFSTFVALLKAAGLVDTLNGSQGPFTVFAPTDEAFAKLPAGTLNFLLKDKEQLKNLLKY 60

Query: 125 HVLTDYFGSKKLHQITNGTALTSSMFQATGSAPGSSGYVNVTD 167
           HV+     S     + NG  L +          GS   VNVT 
Sbjct: 61  HVVPGRLTSS---DLKNGGTLATL--------QGSKLRVNVTG 92

This extracellular domain is found repeated four times in grasshopper fasciclin I as well as in proteins from mammals, sea urchins, plants, yeast and bacteria. Length = 123

>gnl|CDD|184724 PRK14520, rpsP, 30S ribosomal protein S16; Provisional

 Score = 37.4 bits (87), Expect = 0.004
 Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 5/68 (7%)

Query: 343 GTLKDEEPLVIYKINKVLLPIELFKPEVETEAPAPAPTPHKRKTKKDKDEAEADAPVDDS 402
           GTLK  EP    K +K+ L       E +    A A TP K+K   +   AEA AP  ++
Sbjct: 91  GTLKVAEP----KPSKLELFNAALA-EADGGPTAEATTPKKKKAAAEAAAAEAAAPAAEA 145

Query: 403 EDQTADNE 410
               A  E
Sbjct: 146 AAAAAAEE 153

Length = 155

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	435
KOG1437	682	consensus Fasciclin and related adhesion glycoprot	99.94
COG2335	187	Secreted and surface protein containing fasciclin-	99.89
PF02469	128	Fasciclin: Fasciclin domain; InterPro: IPR000782 T	99.79
COG2335	187	Secreted and surface protein containing fasciclin-	99.75
smart00554	99	FAS1 Four repeated domains in the Fasciclin I fami	99.73
PF02469	128	Fasciclin: Fasciclin domain; InterPro: IPR000782 T	99.6
KOG1437	682	consensus Fasciclin and related adhesion glycoprot	99.59
smart00554	99	FAS1 Four repeated domains in the Fasciclin I fami	99.23

>KOG1437 consensus Fasciclin and related adhesion glycoproteins [Cell wall/membrane/envelope biogenesis; Extracellular structures]

Probab=99.94  E-value=9.2e-27  Score=248.07  Aligned_cols=312  Identities=17%  Similarity=0.145  Sum_probs=219.9

Q ss_pred             CCCccEEEeecCCceE--EEEeecCceeeehhhHHHHHHHHhhcCCCCcccHHHHHccCCCcHHHHHHHHHhchhhHhcC
Q 013841           14 LHSTPLLVHKSTDTVT--AAAMENRPLLTTNLLLFPLLVLLLSSTTSHAHNITRILAKHPEFSTFNHYLTVTHLAAEINR   91 (435)
Q Consensus        14 ~~~~~l~v~~~~~~~t--~~~~~~~~~~~~n~v~~~~~~ll~~~~~~~a~ni~~~L~~~~~~Stf~~lL~~tgL~~~L~~   91 (435)
                      .+|...++||+|++.+  |..+.+||++.+||+||+|+..|.+++   .++++++..++ +-|++.+++.+-|+.+.|..
T Consensus       328 ~~~~~~a~g~~g~~~~~ng~~~I~kd~i~~~~~lh~id~~l~p~~---~~~l~~La~e~-~~st~~rlv~elgll~~L~~  403 (682)
T KOG1437|consen  328 GEGVAIAPGSSGERYHINGRAIIQKDFIHTNGLLHYIDYVLEPDS---LKNLMSLARED-EISTSMRLVAELGLLTALAP  403 (682)
T ss_pred             cccccccccCCCceEEeecceeEEEeeeccceEEEEcccccCCch---HHHHHHHHhcc-cccHHHHHHHhccceEEEcC
Confidence            5778899999999977  444444999999999999999888544   78998866554 66999999999999998888


Q ss_pred             CCceEEEEeCcHHHHhhhhcCCCHHHHHHHHhhcccccccCccccccccCCceeecccccccCCCCCCCCeEEEEEcCCC
Q 013841           92 RQTITVLALDNSAMSSLLSKQLSVYTLRNVLSLHVLTDYFGSKKLHQITNGTALTSSMFQATGSAPGSSGYVNVTDLKGG  171 (435)
Q Consensus        92 ~~~~TVfAPtN~AF~~l~~~~~~~~~L~~lL~yHVl~~~~~s~~L~~l~~g~~l~~Tl~q~tg~a~~~~g~vnit~~~~g  171 (435)
                      .+.+|+|+|+|.+|+++... +.+..+++||.||+++.+..++++   +++++.+.|+.       ++.-.+.+.+ ..+
T Consensus       404 n~e~t~~lp~n~~fd~~~~~-~~r~l~~qIL~~HII~~~~~~~~~---y~~~~~v~t~g-------~~~l~~fv~r-~~~  471 (682)
T KOG1437|consen  404 NDEATLLLPTNNLFDDLTPL-ESRRLAEQILYNHIIPEYLTSSSM---YNGQTTVRTLG-------KNKLLYFVYR-HSV  471 (682)
T ss_pred             CCceEEeeehhhhccCCChh-hhHHHHHHHHHHhCcchhhhhhhh---hcccceeeccC-------CeEEEEEEec-ccc
Confidence            77799999999999997553 234568999999999999999887   66665556553       1111111221 111


Q ss_pred             eEEEccccCCCccceeEeeecccccccceeeeeecccccCcCCCCCCCCCCCCHHHHHHhcC-hHHHHHHHHHcCchhhh
Q 013841          172 KVGFGAEDNDGKLDATYVKSVAEFPYNISVLQISQVLNSDEAEAPTPGPSGLNLTAIMAKQG-CKAFADLLIATGAHTTF  250 (435)
Q Consensus       172 ~V~~~~~~~g~~~~atvv~~v~~~~~ng~V~~Id~vL~p~~~~ap~~~p~~~~i~~~L~~~g-~stf~~lL~~agL~~~L  250 (435)
                      +.....-..|+ . +++...... ..||+||.||+|+.|            .++.+.|+..+ ++.+.++++..++.++|
T Consensus       472 s~~~t~i~~~~-~-~~Ii~aDi~-~~nGvvH~id~vl~p------------~~l~~~l~~d~r~s~~~~~le~~~l~e~l  536 (682)
T KOG1437|consen  472 SANVTDILIGN-E-ACIIEADIS-VKNGVVHIIDRVLDP------------VSLMEDLKTDGRISGTVQGLEGVLLPEEL  536 (682)
T ss_pred             cccceeeeccc-e-eeEEecccc-eecCceEEeeEEcCc------------ccHHHHHhhccchhhhHHhhhhcCChhhh
Confidence            11110000122 3 455443222 348999999999987            27899999999 99999999999999999


Q ss_pred             cccCCCCeEEEecCcHHHHhhhhhhhcc-cHHHHHhhccccccccccchhhhcccCccccccccCCCcceEEEEEEcCCe
Q 013841          251 EENLDGGLTVFCPTDAVVNDFMPKYKNL-TEAHKVSLLLYHGTPVYQSLQTLKSSNGVMNTLATDGASKYDFTVQNDGEI  329 (435)
Q Consensus       251 ~~~~~~~~TVFAPTD~AF~~l~~~l~~l-~~~~L~~lL~YHvvp~~~~~~~l~~~~~~~~Tlag~~~~~~~l~v~~~g~~  329 (435)
                      +..  +.||+|+|||+||.+......++ ....|..+++||++++...   +.-...+..++        .+.++..++.
T Consensus       537 ~~~--~~~t~fvPt~ka~~~~~~~~~~~~~~~~l~~~l~yH~v~~~~~---ls~~~~~~v~~--------~~k~s~~~~~  603 (682)
T KOG1437|consen  537 TPE--GNYTLFVPTNKAWQKSTKDEKSLFHKKALQDFLKYHLVPGQSR---LSLGSSPYVMI--------QVKLSLRGDH  603 (682)
T ss_pred             ccC--CceEEEeecccccccCCcchhhcchHHHHHHHHHhccccceee---eecccccceee--------eeeEEEeccc
Confidence            776  89999999999999885433223 3468999999999997553   21111111111        0222233443


Q ss_pred             EEEee----C-cccceEEeeeccCCCeEEEEeCCccCCCCCCCCC
Q 013841          330 VTLKT----K-ATTAKITGTLKDEEPLVIYKINKVLLPIELFKPE  369 (435)
Q Consensus       330 v~v~~----g-v~~a~V~~~~~~~~ngvIh~ID~VL~P~~l~~~~  369 (435)
                      +.+..    + ++..+++...+...||++|+||.||.|+.++...
T Consensus       604 ~~~~~~~~~~~vn~e~~~~~~i~~~n~~~h~i~~vl~p~~l~~~n  648 (682)
T KOG1437|consen  604 LFFSLVNPRGDVNKERLVGIDIMGTNGVVHVIDLVLKPPDLPFLN  648 (682)
T ss_pred             EEeeeeccccceeeeeeeccceeeecceeEEEEEEcccCcchhhc
Confidence            33322    1 3444555666667799999999999999777665

>COG2335 Secreted and surface protein containing fasciclin-like repeats [Cell envelope biogenesis, outer membrane]

Probab=99.89  E-value=3e-23  Score=189.06  Aligned_cols=132  Identities=25%  Similarity=0.306  Sum_probs=110.9

Q ss_pred             CCHHHHHHhcC-hHHHHHHHHHcCchhhhcccCCCCeEEEecCcHHHHhhhh-hhhcc----cHHHHHhhcccccccccc
Q 013841          223 LNLTAIMAKQG-CKAFADLLIATGAHTTFEENLDGGLTVFCPTDAVVNDFMP-KYKNL----TEAHKVSLLLYHGTPVYQ  296 (435)
Q Consensus       223 ~~i~~~L~~~g-~stf~~lL~~agL~~~L~~~~~~~~TVFAPTD~AF~~l~~-~l~~l----~~~~L~~lL~YHvvp~~~  296 (435)
                      .+|.+....++ |++|..+++.++|.++|++.  |+||||||||+||.+++. ++..|    ++.+|+.+|.|||++|.+
T Consensus        48 ~~iV~~a~~~~~f~tl~~a~~aa~Lv~~L~~~--gp~TVFaPtn~AFa~lp~~T~~~Ll~pen~~~L~~iLtYHVv~Gk~  125 (187)
T COG2335          48 ADIVESAANNPSFTTLVAALKAAGLVDTLNET--GPFTVFAPTNEAFAKLPAGTLDALLKPENKPLLTKILTYHVVEGKI  125 (187)
T ss_pred             hHHHHHHccCcchHHHHHHHHhhhhHHHhcCC--CCeEEecCCHHHHHhCChhHHHHHhCccchhhhheeeEEEEEcCcc
Confidence            46666666666 99999999999999999998  999999999999999964 55555    457899999999999999


Q ss_pred             chhhhcccCccccccccCCCcceEEEEEEcCCeEEEeeCcccceEEeeeccCCCeEEEEeCCccCCCCCC
Q 013841          297 SLQTLKSSNGVMNTLATDGASKYDFTVQNDGEIVTLKTKATTAKITGTLKDEEPLVIYKINKVLLPIELF  366 (435)
Q Consensus       297 ~~~~l~~~~~~~~Tlag~~~~~~~l~v~~~g~~v~v~~gv~~a~V~~~~~~~~ngvIh~ID~VL~P~~l~  366 (435)
                      ...+++. .+.++|+.|.     .+++...++.+.|+    .++|+..++..+|||||+||+||+|+..-
T Consensus       126 ~~~~l~~-~~~v~t~~G~-----~~~i~~~~~~~~Vn----~a~v~~~di~a~NgvIhvID~Vl~Pp~~~  185 (187)
T COG2335         126 TAADLKS-SGSVKTVQGA-----DLKIKVTGGGVYVN----DATVTIADINASNGVIHVIDKVLIPPMDL  185 (187)
T ss_pred             cHHHhhc-cccceeecCc-----eEEEEEcCCcEEEe----eeEEEeccEeccCcEEEEEeeeccCCCcc
Confidence            9999874 4568888774     56666666668886    67888888888999999999999998753

>PF02469 Fasciclin: Fasciclin domain; InterPro: IPR000782 The FAS1 (fasciclin-like) domain is an extracellular module of about 140 amino acid residues

Probab=99.79  E-value=2.8e-19  Score=155.03  Aligned_cols=121  Identities=24%  Similarity=0.355  Sum_probs=91.1

Q ss_pred             hHHHHHHHHHcCchhhh-cccCCCCeEEEecCcHHHHhhhh-hhhcc--cHHHHHhhccccccccccchhhhcccCcccc
Q 013841          234 CKAFADLLIATGAHTTF-EENLDGGLTVFCPTDAVVNDFMP-KYKNL--TEAHKVSLLLYHGTPVYQSLQTLKSSNGVMN  309 (435)
Q Consensus       234 ~stf~~lL~~agL~~~L-~~~~~~~~TVFAPTD~AF~~l~~-~l~~l--~~~~L~~lL~YHvvp~~~~~~~l~~~~~~~~  309 (435)
                      |++|.++|+++|+.+.| ++.  +.+|||||+|+||+++.. ..+.+  ..+.++++|+||++++.++.++++.....++
T Consensus         3 ~s~f~~~l~~~~l~~~l~~~~--~~~TvfaP~d~a~~~~~~~~~~~~~~~~~~l~~~l~~hiv~~~~~~~~l~~~~~~~~   80 (128)
T PF02469_consen    3 LSTFSRLLEQAGLADLLNDSD--GNYTVFAPTDDAFQKLSQETNSSLADSKEQLKSLLKYHIVPGSITSSDLRNGKQTLE   80 (128)
T ss_dssp             THHHHHHHHHTTCHHHHGCSS--SSEEEEEE-HHHHHHSHHHHHHHHHTHHHHHHHHHHHTEEES---HCHHHCHHEEEE
T ss_pred             HHHHHHHHHHcCCHHHHhcCC--CCEEEEEECHHHHHhccccccchhhhhhhhHhhhhhhEEEcCceehhhhccccccce
Confidence            89999999999999999 554  899999999999999842 33333  6688999999999999999999875423577


Q ss_pred             c-cccCCCcceEEEEEEcCCeEEEeeCcccceEEeeeccCCCeEEEEeCCccCC
Q 013841          310 T-LATDGASKYDFTVQNDGEIVTLKTKATTAKITGTLKDEEPLVIYKINKVLLP  362 (435)
Q Consensus       310 T-lag~~~~~~~l~v~~~g~~v~v~~gv~~a~V~~~~~~~~ngvIh~ID~VL~P  362 (435)
                      | +.|.   .+.++...+++.+.|+.   .++|+..++...||+||+||+||+|
T Consensus        81 t~~~g~---~~~v~~~~~~~~~~v~~---~a~i~~~~~~~~nG~ih~id~vL~P  128 (128)
T PF02469_consen   81 TLLNGQ---PLRVSSSPSNGTIYVNG---KARIVKSDIEASNGVIHIIDDVLIP  128 (128)
T ss_dssp             BSSTTC---EEEEEEEGGTTEEEECC---EEEESEEEEEESSEEEEEESS-TSS
T ss_pred             eccCCC---EEEEEEEecCCceEecC---ceEEEeCCEEeCCEEEEEECceECc
Confidence            7 4442   34444432377888864   5888877788889999999999998

It has been suggested that the FAS1 domain represents an ancient cell adhesion domain common to plants and animals []; related FAS1 domains are also found in bacteria []. The crystal structure of FAS1 domains 3 and 4 of fasciclin I from Drosophila melanogaster (Fruit fly) has been determined, revealing a novel domain fold consisting of a seven-stranded beta wedge and at least five alpha helices; two well-ordered N-acetylglucosamine groups attached to a conserved asparagine are located in the interface region between the two FAS1 domains []. Fasciclin I is an insect neural cell adhesion molecule involved in axonal guidance that is attached to the membrane by a GPI-anchored protein. FAS1 domains are present in many secreted and membrane-anchored proteins. These proteins are usually GPI anchored and consist of: (i) a single FAS1 domain, (ii) a tandem array of FAS1 domains, or (iii) FAS1 domain(s) interspersed with other domains. Proteins known to contain a FAS1 domain include: Fasciclin I (4 FAS1 domains). Human TGF-beta induced Ig-H3 (BIgH3) protein (4 FAS1 domains), where the FAS1 domains mediate cell adhesion through an interaction with alpha3/beta1 integrin; mutation in the FAS1 domains result in corneal dystrophy []. Volvox major cell adhesion protein (2 FAS1 domains) []. Arabidopsis fasciclin-like arabinogalactan proteins (2 FAS1 domains) []. Mammalian stabilin protein, a family of fasciclin-like hyaluronan receptor homologues (7 FAS1 domains)[]. Human extracellular matrix protein periostin (4 FAS1 domains). Bacterial immunogenic protein MPT70 (1 FAS1 domain) []. The FAS1 domains of both human periostin (Q15063 from SWISSPROT) and BIgH3 (Q15582 from SWISSPROT) proteins were found to contain vitamin K-dependent gamma-carboxyglutamate residues []. Gamma-carboxyglutamate residues are more commonly associated with GLA domains (IPR000294 from INTERPRO), where they occur through post-translational modification catalysed by the vitamin K-dependent enzyme gamma-glutamylcarboxylase.; PDB: 1O70_A 1W7D_A 1W7E_A 1NYO_A 1X3B_A 2VXP_A.

>COG2335 Secreted and surface protein containing fasciclin-like repeats [Cell envelope biogenesis, outer membrane]

Probab=99.75  E-value=3.1e-18  Score=156.35  Aligned_cols=130  Identities=22%  Similarity=0.266  Sum_probs=99.7

Q ss_pred             CcccHHHHHccCCCcHHHHHHHHHhchhhHhcCCCceEEEEeCcHHHHhhhhcC-----C--CHHHHHHHHhhccccccc
Q 013841           59 HAHNITRILAKHPEFSTFNHYLTVTHLAAEINRRQTITVLALDNSAMSSLLSKQ-----L--SVYTLRNVLSLHVLTDYF  131 (435)
Q Consensus        59 ~a~ni~~~L~~~~~~Stf~~lL~~tgL~~~L~~~~~~TVfAPtN~AF~~l~~~~-----~--~~~~L~~lL~yHVl~~~~  131 (435)
                      ..++|.+...++++|++|..+++.++|.+.|++.|+||||||+|+||++++...     .  +++.|+.+|.|||+.|++
T Consensus        46 ~~~~iV~~a~~~~~f~tl~~a~~aa~Lv~~L~~~gp~TVFaPtn~AFa~lp~~T~~~Ll~pen~~~L~~iLtYHVv~Gk~  125 (187)
T COG2335          46 NRADIVESAANNPSFTTLVAALKAAGLVDTLNETGPFTVFAPTNEAFAKLPAGTLDALLKPENKPLLTKILTYHVVEGKI  125 (187)
T ss_pred             chhHHHHHHccCcchHHHHHHHHhhhhHHHhcCCCCeEEecCCHHHHHhCChhHHHHHhCccchhhhheeeEEEEEcCcc
Confidence            357888888899999999999999999999999999999999999999998753     2  688999999999999999


Q ss_pred             CccccccccCCceeecccccccCCCCCCCCeEEEEEcCCCeEEEccccCCCccceeEee-ecccccccceeeeeeccccc
Q 013841          132 GSKKLHQITNGTALTSSMFQATGSAPGSSGYVNVTDLKGGKVGFGAEDNDGKLDATYVK-SVAEFPYNISVLQISQVLNS  210 (435)
Q Consensus       132 ~s~~L~~l~~g~~l~~Tl~q~tg~a~~~~g~vnit~~~~g~V~~~~~~~g~~~~atvv~-~v~~~~~ng~V~~Id~vL~p  210 (435)
                      ..+++.....    +.|+-       |  ..++|... ++++.++.        ++++. ++.  ..||+||.||+||+|
T Consensus       126 ~~~~l~~~~~----v~t~~-------G--~~~~i~~~-~~~~~Vn~--------a~v~~~di~--a~NgvIhvID~Vl~P  181 (187)
T COG2335         126 TAADLKSSGS----VKTVQ-------G--ADLKIKVT-GGGVYVND--------ATVTIADIN--ASNGVIHVIDKVLIP  181 (187)
T ss_pred             cHHHhhcccc----ceeec-------C--ceEEEEEc-CCcEEEee--------eEEEeccEe--ccCcEEEEEeeeccC
Confidence            9999854221    23321       1  22455442 33477652        22222 222  369999999999999


Q ss_pred             Cc
Q 013841          211 DE  212 (435)
Q Consensus       211 ~~  212 (435)
                      |.
T Consensus       182 p~  183 (187)
T COG2335         182 PM  183 (187)
T ss_pred             CC
Confidence            86

>smart00554 FAS1 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts

Probab=99.73  E-value=4.7e-18  Score=141.34  Aligned_cols=95  Identities=34%  Similarity=0.443  Sum_probs=77.3

Q ss_pred             EEEecCcHHHHhhhh-hhhcccHH-HHHhhccccccccccchhhhcccCccccccccCCCcceEEEEEEcC--CeEEEee
Q 013841          259 TVFCPTDAVVNDFMP-KYKNLTEA-HKVSLLLYHGTPVYQSLQTLKSSNGVMNTLATDGASKYDFTVQNDG--EIVTLKT  334 (435)
Q Consensus       259 TVFAPTD~AF~~l~~-~l~~l~~~-~L~~lL~YHvvp~~~~~~~l~~~~~~~~Tlag~~~~~~~l~v~~~g--~~v~v~~  334 (435)
                      |||||+|+||+++.+ .++.+..+ .++++|+||+++++++.++|.. ...++|+.|.     .+.++..+  +.+.++ 
T Consensus         1 TvfaP~d~Af~~~~~~~~~~l~~~~~l~~ll~~Hiv~~~~~~~~l~~-~~~~~Tl~g~-----~l~v~~~~~~~~i~in-   73 (99)
T smart00554        1 TVFAPTDEAFQKLPPGTLNSLLADPKLKNLLLYHVVPGRLSSADLLN-GGTLPTLAGS-----KLRVTRSGDSGTVTVN-   73 (99)
T ss_pred             CEeCcCHHHHHhcCHHHHHHHhCCHHHHHHHHhcEeCceEcHHHhcc-CCccccCCCC-----EEEEEEeCCCCeEEEc-
Confidence            899999999999954 45555434 8999999999999999999975 3568888753     56666665  677775 


Q ss_pred             CcccceEEeeeccCCCeEEEEeCCccCCC
Q 013841          335 KATTAKITGTLKDEEPLVIYKINKVLLPI  363 (435)
Q Consensus       335 gv~~a~V~~~~~~~~ngvIh~ID~VL~P~  363 (435)
                         +++|+..++..+||+||+||+||+|+
T Consensus        74 ---~~~v~~~di~~~nGvih~Id~vL~P~   99 (99)
T smart00554       74 ---GARIVEADIAATNGVVHVIDRVLLPP   99 (99)
T ss_pred             ---ceEEEECCEecCCeEEEEECceeCCC
Confidence               47888888888899999999999996

>PF02469 Fasciclin: Fasciclin domain; InterPro: IPR000782 The FAS1 (fasciclin-like) domain is an extracellular module of about 140 amino acid residues

Probab=99.60  E-value=2.7e-15  Score=129.95  Aligned_cols=121  Identities=26%  Similarity=0.320  Sum_probs=83.3

Q ss_pred             CCcHHHHHHHHHhchhhHh-cCCCceEEEEeCcHHHHhhhhcC-----CCHHHHHHHHhhcccccccCccccccccCCce
Q 013841           71 PEFSTFNHYLTVTHLAAEI-NRRQTITVLALDNSAMSSLLSKQ-----LSVYTLRNVLSLHVLTDYFGSKKLHQITNGTA  144 (435)
Q Consensus        71 ~~~Stf~~lL~~tgL~~~L-~~~~~~TVfAPtN~AF~~l~~~~-----~~~~~L~~lL~yHVl~~~~~s~~L~~l~~g~~  144 (435)
                      |+||+|.++|+++||.+.| +..+.+|||||+|+||+++....     .+.+.++.+|+|||+++.+..++|.   ++.+
T Consensus         1 ~~~s~f~~~l~~~~l~~~l~~~~~~~TvfaP~d~a~~~~~~~~~~~~~~~~~~l~~~l~~hiv~~~~~~~~l~---~~~~   77 (128)
T PF02469_consen    1 PDLSTFSRLLEQAGLADLLNDSDGNYTVFAPTDDAFQKLSQETNSSLADSKEQLKSLLKYHIVPGSITSSDLR---NGKQ   77 (128)
T ss_dssp             -TTHHHHHHHHHTTCHHHHGCSSSSEEEEEE-HHHHHHSHHHHHHHHHTHHHHHHHHHHHTEEES---HCHHH---CHHE
T ss_pred             CCHHHHHHHHHHcCCHHHHhcCCCCEEEEEECHHHHHhccccccchhhhhhhhHhhhhhhEEEcCceehhhhc---cccc
Confidence            7899999999999999999 67799999999999999874321     1567899999999999999988884   3312


Q ss_pred             eecccccccCCCCCCCCeEEEEEc-CCCeEEEccccCCCccceeEeeecccccccceeeeeeccccc
Q 013841          145 LTSSMFQATGSAPGSSGYVNVTDL-KGGKVGFGAEDNDGKLDATYVKSVAEFPYNISVLQISQVLNS  210 (435)
Q Consensus       145 l~~Tl~q~tg~a~~~~g~vnit~~-~~g~V~~~~~~~g~~~~atvv~~v~~~~~ng~V~~Id~vL~p  210 (435)
                      .+.|+.+      +  ..+.++.. .++.+.+..       .+.+++... ...||.||.||+||.|
T Consensus        78 ~~~t~~~------g--~~~~v~~~~~~~~~~v~~-------~a~i~~~~~-~~~nG~ih~id~vL~P  128 (128)
T PF02469_consen   78 TLETLLN------G--QPLRVSSSPSNGTIYVNG-------KARIVKSDI-EASNGVIHIIDDVLIP  128 (128)
T ss_dssp             EEEBSST------T--CEEEEEEEGGTTEEEECC-------EEEESEEEE-EESSEEEEEESS-TSS
T ss_pred             cceeccC------C--CEEEEEEEecCCceEecC-------ceEEEeCCE-EeCCEEEEEECceECc
Confidence            2344211      1  24556554 467788753       244443222 3468999999999987

It has been suggested that the FAS1 domain represents an ancient cell adhesion domain common to plants and animals []; related FAS1 domains are also found in bacteria []. The crystal structure of FAS1 domains 3 and 4 of fasciclin I from Drosophila melanogaster (Fruit fly) has been determined, revealing a novel domain fold consisting of a seven-stranded beta wedge and at least five alpha helices; two well-ordered N-acetylglucosamine groups attached to a conserved asparagine are located in the interface region between the two FAS1 domains []. Fasciclin I is an insect neural cell adhesion molecule involved in axonal guidance that is attached to the membrane by a GPI-anchored protein. FAS1 domains are present in many secreted and membrane-anchored proteins. These proteins are usually GPI anchored and consist of: (i) a single FAS1 domain, (ii) a tandem array of FAS1 domains, or (iii) FAS1 domain(s) interspersed with other domains. Proteins known to contain a FAS1 domain include: Fasciclin I (4 FAS1 domains). Human TGF-beta induced Ig-H3 (BIgH3) protein (4 FAS1 domains), where the FAS1 domains mediate cell adhesion through an interaction with alpha3/beta1 integrin; mutation in the FAS1 domains result in corneal dystrophy []. Volvox major cell adhesion protein (2 FAS1 domains) []. Arabidopsis fasciclin-like arabinogalactan proteins (2 FAS1 domains) []. Mammalian stabilin protein, a family of fasciclin-like hyaluronan receptor homologues (7 FAS1 domains)[]. Human extracellular matrix protein periostin (4 FAS1 domains). Bacterial immunogenic protein MPT70 (1 FAS1 domain) []. The FAS1 domains of both human periostin (Q15063 from SWISSPROT) and BIgH3 (Q15582 from SWISSPROT) proteins were found to contain vitamin K-dependent gamma-carboxyglutamate residues []. Gamma-carboxyglutamate residues are more commonly associated with GLA domains (IPR000294 from INTERPRO), where they occur through post-translational modification catalysed by the vitamin K-dependent enzyme gamma-glutamylcarboxylase.; PDB: 1O70_A 1W7D_A 1W7E_A 1NYO_A 1X3B_A 2VXP_A.

>KOG1437 consensus Fasciclin and related adhesion glycoproteins [Cell wall/membrane/envelope biogenesis; Extracellular structures]

Probab=99.59  E-value=1.2e-15  Score=163.35  Aligned_cols=149  Identities=21%  Similarity=0.213  Sum_probs=112.7

Q ss_pred             cccceeeeeecccccCcCCCCCCCCCCCCHHHHHHhcChHHHHHHHHHcCchhhhcccCCCCeEEEecCcHHHHhhhhhh
Q 013841          196 PYNISVLQISQVLNSDEAEAPTPGPSGLNLTAIMAKQGCKAFADLLIATGAHTTFEENLDGGLTVFCPTDAVVNDFMPKY  275 (435)
Q Consensus       196 ~~ng~V~~Id~vL~p~~~~ap~~~p~~~~i~~~L~~~g~stf~~lL~~agL~~~L~~~~~~~~TVFAPTD~AF~~l~~~l  275 (435)
                      ..|++||.||.+|.|+.         ..+++++..++.++++.+++.+-|+.+.|...  +.+|+|+|+|++|+.+.+.+
T Consensus       356 ~~~~~lh~id~~l~p~~---------~~~l~~La~e~~~st~~rlv~elgll~~L~~n--~e~t~~lp~n~~fd~~~~~~  424 (682)
T KOG1437|consen  356 HTNGLLHYIDYVLEPDS---------LKNLMSLAREDEISTSMRLVAELGLLTALAPN--DEATLLLPTNNLFDDLTPLE  424 (682)
T ss_pred             ccceEEEEcccccCCch---------HHHHHHHHhcccccHHHHHHHhccceEEEcCC--CceEEeeehhhhccCCChhh
Confidence            34589999999999863         36899998888899999999999999988776  66999999999999985522


Q ss_pred             hcccHHHHHhhccccccccccchhhhcccCccccccccCCCcceEEEEEEcCCeEE---EeeCcccceEEeeeccCCCeE
Q 013841          276 KNLTEAHKVSLLLYHGTPVYQSLQTLKSSNGVMNTLATDGASKYDFTVQNDGEIVT---LKTKATTAKITGTLKDEEPLV  352 (435)
Q Consensus       276 ~~l~~~~L~~lL~YHvvp~~~~~~~l~~~~~~~~Tlag~~~~~~~l~v~~~g~~v~---v~~gv~~a~V~~~~~~~~ngv  352 (435)
                         .+..+++||+||+++.++...+..+....++|+-+   .++..-+.+..+...   +..+. .+.|+..++...||+
T Consensus       425 ---~r~l~~qIL~~HII~~~~~~~~~y~~~~~v~t~g~---~~l~~fv~r~~~s~~~t~i~~~~-~~~Ii~aDi~~~nGv  497 (682)
T KOG1437|consen  425 ---SRRLAEQILYNHIIPEYLTSSSMYNGQTTVRTLGK---NKLLYFVYRHSVSANVTDILIGN-EACIIEADISVKNGV  497 (682)
T ss_pred             ---hHHHHHHHHHHhCcchhhhhhhhhcccceeeccCC---eEEEEEEecccccccceeeeccc-eeeEEecccceecCc
Confidence               12237899999999999998887755446677643   234444444322211   21122 378888888889999


Q ss_pred             EEEeCCccCC
Q 013841          353 IYKINKVLLP  362 (435)
Q Consensus       353 Ih~ID~VL~P  362 (435)
                      ||.||+||-|
T Consensus       498 vH~id~vl~p  507 (682)
T KOG1437|consen  498 VHIIDRVLDP  507 (682)
T ss_pred             eEEeeEEcCc
Confidence            9999999999

>smart00554 FAS1 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts

Probab=99.23  E-value=1.7e-11  Score=101.74  Aligned_cols=93  Identities=28%  Similarity=0.306  Sum_probs=63.9

Q ss_pred             EEEEeCcHHHHhhhhcC---C--CHHHHHHHHhhcccccccCccccccccCCceeecccccccCCCCCCCCeEEEEEcCC
Q 013841           96 TVLALDNSAMSSLLSKQ---L--SVYTLRNVLSLHVLTDYFGSKKLHQITNGTALTSSMFQATGSAPGSSGYVNVTDLKG  170 (435)
Q Consensus        96 TVfAPtN~AF~~l~~~~---~--~~~~L~~lL~yHVl~~~~~s~~L~~l~~g~~l~~Tl~q~tg~a~~~~g~vnit~~~~  170 (435)
                      |||||+|+||+++....   +  +. .++++|+|||+++++..++|..   + ..++|+.   |      ..+.++...+
T Consensus         1 TvfaP~d~Af~~~~~~~~~~l~~~~-~l~~ll~~Hiv~~~~~~~~l~~---~-~~~~Tl~---g------~~l~v~~~~~   66 (99)
T smart00554        1 TVFAPTDEAFQKLPPGTLNSLLADP-KLKNLLLYHVVPGRLSSADLLN---G-GTLPTLA---G------SKLRVTRSGD   66 (99)
T ss_pred             CEeCcCHHHHHhcCHHHHHHHhCCH-HHHHHHHhcEeCceEcHHHhcc---C-CccccCC---C------CEEEEEEeCC
Confidence            89999999999986531   1  22 8999999999999999988843   3 2245542   1      2356665443


Q ss_pred             -CeEEEccccCCCccceeEeeecccccccceeeeeecccccC
Q 013841          171 -GKVGFGAEDNDGKLDATYVKSVAEFPYNISVLQISQVLNSD  211 (435)
Q Consensus       171 -g~V~~~~~~~g~~~~atvv~~v~~~~~ng~V~~Id~vL~p~  211 (435)
                       +.+.++.        +.+++. +....||+||.||+||.|+
T Consensus        67 ~~~i~in~--------~~v~~~-di~~~nGvih~Id~vL~P~   99 (99)
T smart00554       67 SGTVTVNG--------ARIVEA-DIAATNGVVHVIDRVLLPP   99 (99)
T ss_pred             CCeEEEcc--------eEEEEC-CEecCCeEEEEECceeCCC
Confidence             5666642        234443 2234689999999999985

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	435
1o70_A	324	Fasciclin I, FAS I, FCN; cell adhesion, AXON guida	2e-10
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-05

>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1 Length = 324

 Score = 61.1 bits (148), Expect = 2e-10
 Identities = 47/319 (14%), Positives = 90/319 (28%), Gaps = 50/319 (15%)

Query: 67  LAKHPEFSTFNHYLTVT--HLAAEINRRQTITVLALDNSAMSSLLSKQL--SVYTLRNVL 122
            A++     F   +      +  +IN    +T+LA  N A +S     +      +R +L
Sbjct: 18  NAENGALRKFYEVIMDNGGAVLDDINSLTEVTILAPSNEAWNSSNINNVLRDRNKMRQIL 77

Query: 123 SLHVLTDYFGSKKLHQITNGTALTSSMFQATGSAPGSSGYVNVTDLKGGKVGFGAEDNDG 182
           ++H++        + +I       + + Q       +  Y NV       V        G
Sbjct: 78  NMHIIK---DRLNVDKIRQKN--ANLIAQVPTVNNNTFLYFNVRGEGSDTVIT---VEGG 129

Query: 183 KLDATYVKSVAEFPYNISVLQISQVLNSDEAEAPTPGPSGLNLTAIMAKQGCKAFADLLI 242
            ++AT +++      N  V  I  VL            S   ++             +  
Sbjct: 130 GVNATVIQADVAQT-NGYVHIIDHVLGVPYTTVLGKLESDPMMSD---------TYKMGK 179

Query: 243 ATGAHTTFEENLDGGLTVFCPTDAVVNDFMPKYKNLTE--------AHKVSLLLYH---G 291
            +  +     N     T F P D         Y +  +         H  S+L  H    
Sbjct: 180 FSHFNDQLN-NTQRRFTYFVPRDKGWQKTELDYPSAHKKLFMADFSYHSKSILERHLAIS 238

Query: 292 TPVYQSLQTLKSSNGVMNTLATDGASKYDFTVQNDGEIVTLKTKATTAKIT--------G 343
              Y     +K S    + +           V+ +     +        +         G
Sbjct: 239 DKEYTMKDLVKFSQESGSVILPTFRDSLSIRVEEEAGRYVIIWNYKKINVYRPDVECTNG 298

Query: 344 TLKDEEPLVIYKINKVLLP 362
                   +I+ I+  LL 
Sbjct: 299 --------IIHVIDYPLLE 309

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.5 bits (104), Expect = 6e-05
 Identities = 45/337 (13%), Positives = 91/337 (27%), Gaps = 90/337 (26%)

Query: 82  VTHLAAEINRRQTITVLALDNSAMSSLLSKQLSVYT--LRNVLSLHVLTDY-FGSKKLHQ 138
           + H+    +       L        +LLSKQ  +    +  VL      +Y F    +  
Sbjct: 51  IDHIIMSKDAVSGTLRL------FWTLLSKQEEMVQKFVEEVLR----INYKFLMSPIKT 100

Query: 139 ITNGTALTSSMFQA------TGSAPGSSGYVN----VTDLKG--------------GKVG 174
                ++ + M+          +   +   V+       L+               G +G
Sbjct: 101 EQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLG 160

Query: 175 FGAEDNDGKLDATYVKSVAEFPYNISVLQISQVLNSDEAEAPTPGPSG---LNLTAIMAK 231
            G             K+          +    V  S + +           LNL     K
Sbjct: 161 SG-------------KTW---------V-ALDVCLSYKVQCKMDF--KIFWLNL-----K 190

Query: 232 QGCKAFADLLIATGAHTTFEENLDGGLTVFCPTDAVVNDFMPKYKNL--TEAHKVSLL-L 288
                   L +        + N              ++    + + L  ++ ++  LL L
Sbjct: 191 NCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVL 250

Query: 289 YHGTPVYQSLQTLKSSNGVMNTLAT----------DGASKYDFTVQNDGEIVTL-KTKAT 337
            +   V Q+ +   + N     L T            A+    ++ +    +T  + K+ 
Sbjct: 251 LN---V-QNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSL 306

Query: 338 TAKITGTLKDEEPLVIYKINKVLLPI--ELFKPEVET 372
             K       + P  +   N   L I  E  +  + T
Sbjct: 307 LLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLAT 343

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	435
1o70_A	324	Fasciclin I, FAS I, FCN; cell adhesion, AXON guida	100.0
1w7d_A	137	Fasciclin-like protein; cell adhesion; NMR {Rhodob	99.92
2vxp_A	132	Transforming growth factor-beta-induced protein IG	99.92
1nyo_A	163	Immunogenic protein MPT70; seven-stranded beta-bar	99.91
1o70_A	324	Fasciclin I, FAS I, FCN; cell adhesion, AXON guida	99.83
1w7d_A	137	Fasciclin-like protein; cell adhesion; NMR {Rhodob	99.82
2vxp_A	132	Transforming growth factor-beta-induced protein IG	99.81
1nyo_A	163	Immunogenic protein MPT70; seven-stranded beta-bar	99.78

>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1

Probab=100.00  E-value=8.7e-44  Score=355.80  Aligned_cols=284  Identities=17%  Similarity=0.151  Sum_probs=209.5

Q ss_pred             CcccHHHHHc------cCCCcHHHHHHHHHhc--hhhHhcCCCceEEEEeCcHHHHhhhhcC--CCHHHHHHHHhhcccc
Q 013841           59 HAHNITRILA------KHPEFSTFNHYLTVTH--LAAEINRRQTITVLALDNSAMSSLLSKQ--LSVYTLRNVLSLHVLT  128 (435)
Q Consensus        59 ~a~ni~~~L~------~~~~~Stf~~lL~~tg--L~~~L~~~~~~TVfAPtN~AF~~l~~~~--~~~~~L~~lL~yHVl~  128 (435)
                      ...||+++|.      ++++||+|.++|+++|  |.+.|++.++||||||+|+||+++....  .+.+.|+++|+|||++
T Consensus         4 ~~~~i~~~L~~~~~~~~~~~~s~~~~~l~~ag~~l~~~L~~~~~~TvFAPtn~Af~~~~~~~l~~~~~~l~~iL~yHvv~   83 (324)
T 1o70_A            4 ADTTVTQFLQSFKENAENGALRKFYEVIMDNGGAVLDDINSLTEVTILAPSNEAWNSSNINNVLRDRNKMRQILNMHIIK   83 (324)
T ss_dssp             ---------------CCHHHHHHHHHHHHHTCSHHHHHHHTCSSEEEEEECHHHHHHTCTHHHHTCHHHHHHHHHHTEES
T ss_pred             ehhhHHHHHHHHHhhhcCCcHHHHHHHHHHHhHHHHHHHcCCCCeEEEEEChHhhhcccHhhhhCCHHHHHHHHHhcEeC
Confidence            3678889887      6889999999999999  9999999999999999999998763322  3688999999999999


Q ss_pred             cccCccccccccCC-ceeecccccccCCCCCCCCeEEEEEc-CCCeEEEccccCCCccceeEeeecccccccceeeeeec
Q 013841          129 DYFGSKKLHQITNG-TALTSSMFQATGSAPGSSGYVNVTDL-KGGKVGFGAEDNDGKLDATYVKSVAEFPYNISVLQISQ  206 (435)
Q Consensus       129 ~~~~s~~L~~l~~g-~~l~~Tl~q~tg~a~~~~g~vnit~~-~~g~V~~~~~~~g~~~~atvv~~v~~~~~ng~V~~Id~  206 (435)
                      ++|.+++|.....+ ...++|+.+..      ..+++++.. .++.+.+..    +...+++++. +....||+||.||+
T Consensus        84 g~~~~~~l~~~~~~~~~~~~Tl~g~~------~l~~~v~~~~~~~~v~v~~----g~~~a~v~~~-di~~~NGvIhvID~  152 (324)
T 1o70_A           84 DRLNVDKIRQKNANLIAQVPTVNNNT------FLYFNVRGEGSDTVITVEG----GGVNATVIQA-DVAQTNGYVHIIDH  152 (324)
T ss_dssp             SCCCHHHHHHHTSSSCCCEEBSSTTC------EEEEEEESCGGGCEEEEEE----TTEEEEEEEE-EEECSSEEEEEESS
T ss_pred             CeecHHHHhhccCCCceEEEcCCCCc------eEEEEEeecCCceEEEEcC----CceeEEEEec-cccccCcEEEEEch
Confidence            99999998654321 11356664211      123455421 234566642    2234666654 22356999999999


Q ss_pred             ccccCcCCCCCCCCCCCCHHHHHHhcC-hHHHHHHHHHcCchhhhcccCCCCeEEEecCcHHHHhhh----h-hhhcccH
Q 013841          207 VLNSDEAEAPTPGPSGLNLTAIMAKQG-CKAFADLLIATGAHTTFEENLDGGLTVFCPTDAVVNDFM----P-KYKNLTE  280 (435)
Q Consensus       207 vL~p~~~~ap~~~p~~~~i~~~L~~~g-~stf~~lL~~agL~~~L~~~~~~~~TVFAPTD~AF~~l~----~-~l~~l~~  280 (435)
                      ||.||.          .++.++|++.+ |++|.++++.+|+.++|++. .++||||||+|+||+++.    . .++.+..
T Consensus       153 VL~pp~----------~ti~~~l~~~~~fs~~~~~l~~~gl~~~L~~~-~~~~TvFAPtd~Af~~l~~~~~~~~~~~l~~  221 (324)
T 1o70_A          153 VLGVPY----------TTVLGKLESDPMMSDTYKMGKFSHFNDQLNNT-QRRFTYFVPRDKGWQKTELDYPSAHKKLFMA  221 (324)
T ss_dssp             CTTSCC----------SCHHHHHHHCGGGHHHHHHTTTTTTTGGGGCS-SSEEEEEEECHHHHHHHHHHCHHHHHHHTSG
T ss_pred             hhhhch----------hhHHHHhhcCchHHHHHHHHHhhCHHHHhCCC-CCCeEEEEeChHHHHhhhhhchhHHHHHhcc
Confidence            999863          48999999988 99999999999999999842 279999999999999984    2 2333332


Q ss_pred             ---HHHHhhcccccccc--ccchhhhcccCc-----cccccccCCCcceEEEEEEcCCeEEEeeCcccceEEeeeccCCC
Q 013841          281 ---AHKVSLLLYHGTPV--YQSLQTLKSSNG-----VMNTLATDGASKYDFTVQNDGEIVTLKTKATTAKITGTLKDEEP  350 (435)
Q Consensus       281 ---~~L~~lL~YHvvp~--~~~~~~l~~~~~-----~~~Tlag~~~~~~~l~v~~~g~~v~v~~gv~~a~V~~~~~~~~n  350 (435)
                         ++|+++|+||++++  +|+.++|....+     .++|+. +   ++.+++...|+.+.|+.+.+.++|+..++...|
T Consensus       222 ~~~~~l~~iL~yHvv~~~~~~~~~~l~~~~~~~~~~~~~Tl~-~---~l~v~~~~~~~~v~v~~~~~~a~v~~~di~~~N  297 (324)
T 1o70_A          222 DFSYHSKSILERHLAISDKEYTMKDLVKFSQESGSVILPTFR-D---SLSIRVEEEAGRYVIIWNYKKINVYRPDVECTN  297 (324)
T ss_dssp             GGHHHHHHHHHTTEEEESSCCCHHHHHHHHHHSSSEEEECSS-S---EEEEEEEEETTEEEEEETTEEEEEEEEEEEETT
T ss_pred             CcHHHHHHHHHhcEeCCcceEcHHHHhhhccCCCeeeeeccC-C---cEEEEEEecCCEEEEEecCceeEEEEcccccCC
Confidence               58999999999998  888888875322     377876 2   456666667888999866668899888888899


Q ss_pred             eEEEEeCCccCCCCCCCC
Q 013841          351 LVIYKINKVLLPIELFKP  368 (435)
Q Consensus       351 gvIh~ID~VL~P~~l~~~  368 (435)
                      ||||+||+||+|++....
T Consensus       298 GvIHvID~VL~P~~~~~~  315 (324)
T 1o70_A          298 GIIHVIDYPLLEEKDVVV  315 (324)
T ss_dssp             EEEEEESSCSCCTTTTC-
T ss_pred             CeEEEeceeecCCccccc
Confidence            999999999999976544

>1w7d_A Fasciclin-like protein; cell adhesion; NMR {Rhodobacter sphaeroides} PDB: 1w7e_A

Probab=99.92  E-value=2.9e-26  Score=201.73  Aligned_cols=129  Identities=23%  Similarity=0.282  Sum_probs=111.0

Q ss_pred             CCHHHHHHhcC-hHHHHHHHHHcCchhhhcccCCCCeEEEecCcHHHHhhhh-hhhcc----cHHHHHhhcccccccccc
Q 013841          223 LNLTAIMAKQG-CKAFADLLIATGAHTTFEENLDGGLTVFCPTDAVVNDFMP-KYKNL----TEAHKVSLLLYHGTPVYQ  296 (435)
Q Consensus       223 ~~i~~~L~~~g-~stf~~lL~~agL~~~L~~~~~~~~TVFAPTD~AF~~l~~-~l~~l----~~~~L~~lL~YHvvp~~~  296 (435)
                      .+|.++|++.+ |++|.++|+++|+.+.|++.  ++||||||+|+||+++.+ .++.+    +.++|+++|+||++++.+
T Consensus         3 ~~i~~~l~~~~~~s~f~~~l~~agl~~~L~~~--~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~~~l~~lL~yHvv~~~~   80 (137)
T 1w7d_A            3 GDIVETATGAGSFTTLLTAAEAAGLVDTLKGD--GPFTVFAPTDAAFAALPEGTVEDLLKPENKEKLTEILTYHVVPGEV   80 (137)
T ss_dssp             STTGGGGGSCSSSTTTTHHHHHTTTHHHHTSS--SCEEEECCCHHHHTTSTTTHHHHTTSHHHHHHHHHHHHHHEEESCC
T ss_pred             CCHHHHHHhCCCHHHHHHHHHHcCCHHHHcCC--CCEEEEEECHHHHHHcCHhHHHHHhCcCCHHHHHHHHHhhEeCcEE
Confidence            58899998877 99999999999999999987  899999999999999954 56666    567899999999999999


Q ss_pred             chhhhcccCccccccccCCCcceEEEEEEcCCeEEEeeCcccceEEeeeccCCCeEEEEeCCccCCCC
Q 013841          297 SLQTLKSSNGVMNTLATDGASKYDFTVQNDGEIVTLKTKATTAKITGTLKDEEPLVIYKINKVLLPIE  364 (435)
Q Consensus       297 ~~~~l~~~~~~~~Tlag~~~~~~~l~v~~~g~~v~v~~gv~~a~V~~~~~~~~ngvIh~ID~VL~P~~  364 (435)
                      +..+|.. ...++|+.|.     .++|+..++ ++|+    +++|+..++...|||||+||+||+|+.
T Consensus        81 ~~~~l~~-~~~~~tl~G~-----~l~v~~~~g-v~vn----~a~v~~~di~~~NGvIHvID~VL~P~s  137 (137)
T 1w7d_A           81 MSSDLTE-GMTAETVEGG-----ALTVTLEGG-PKVN----GVSISQPDVDASNGVIHVIDGVLMPGA  137 (137)
T ss_dssp             CTTTSCS-SEEEECTTSC-----EEEEECTTS-CEET----TEECSBCCCBCSSSEEEBCSSCCSSCC
T ss_pred             cHHHhcC-CCeeeccCCc-----eEEEEecCC-EEEe----CcEEEECCeecCCeEEEEECeeeCCCC
Confidence            9999874 2357888763     688888777 8875    488888888889999999999999974

>2vxp_A Transforming growth factor-beta-induced protein IG-H3; RGD-containing collagen-associated protein, FAS1, BIGH3, vision, amyloid, RGD-CAP, secreted; 2.5A {Homo sapiens} PDB: 1x3b_A

Probab=99.92  E-value=5.2e-25  Score=192.48  Aligned_cols=127  Identities=17%  Similarity=0.218  Sum_probs=108.1

Q ss_pred             CCHHHHHHhcC-hHHHHHHHHHcCchhhhcccCCCCeEEEecCcHHHHhhhh-hhhcc--cHHHHHhhccccccccccch
Q 013841          223 LNLTAIMAKQG-CKAFADLLIATGAHTTFEENLDGGLTVFCPTDAVVNDFMP-KYKNL--TEAHKVSLLLYHGTPVYQSL  298 (435)
Q Consensus       223 ~~i~~~L~~~g-~stf~~lL~~agL~~~L~~~~~~~~TVFAPTD~AF~~l~~-~l~~l--~~~~L~~lL~YHvvp~~~~~  298 (435)
                      .+|.++|++++ |++|.++|+++|+.+.|++.  ++||||||+|+||+++.+ .++.+  +.++|+++|+||++++.++.
T Consensus         2 ~ti~~~l~~~~~fs~~~~~l~~agl~~~L~~~--~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~l~~iL~yHvv~~~~~~   79 (132)
T 2vxp_A            2 GTVMDVLKGDNRFSMLVAAIQSAGLTETLNRE--GVYTVFAPTNEAFRALPPRERSRLLGDAKELANILKYHIGDEILVS   79 (132)
T ss_dssp             CCHHHHHTTSTTCHHHHHHHHHHTCHHHHHSS--CCEEEEEECHHHHHHSCHHHHHHHHTCHHHHHHHHHHSBBSSCCCS
T ss_pred             ccHHHHHHcCCCHHHHHHHHHHcCcHHHHcCC--CCEEEEeECHHHHHhhCHHHHHHHhcCHHHHHHHHHhcCcCceeeh
Confidence            48999999887 99999999999999999987  899999999999999954 45544  67899999999999998888


Q ss_pred             hhhcccCccccccccCCCcceEEEEEEcCCeEEEeeCcccceEEeeeccCCCeEEEEeCCccC
Q 013841          299 QTLKSSNGVMNTLATDGASKYDFTVQNDGEIVTLKTKATTAKITGTLKDEEPLVIYKINKVLL  361 (435)
Q Consensus       299 ~~l~~~~~~~~Tlag~~~~~~~l~v~~~g~~v~v~~gv~~a~V~~~~~~~~ngvIh~ID~VL~  361 (435)
                      +++.. ...++|+.|.     .++++..++.++|+    +++|+..++...|||||+||+||+
T Consensus        80 ~~l~~-~~~~~tl~G~-----~l~v~~~~~~v~vn----~a~v~~~di~a~NGvIHvID~VLl  132 (132)
T 2vxp_A           80 GGIGA-LVRLKSLQGD-----KLEVSLKNNVVSVN----KEPVAEPDIMATNGVVHVITNVLQ  132 (132)
T ss_dssp             TTCSS-CEEEEBTTSS-----EEEEEEETTEEEES----SCBEEEEEEEETTEEEEEESSCC-
T ss_pred             hhccC-CceEecCCCC-----EEEEEEeCCEEEEe----ccEEEEcceecCCEEEEEECcEeC
Confidence            87763 3467888763     67888888888885    478888888889999999999996

>1nyo_A Immunogenic protein MPT70; seven-stranded beta-barrel, fasciclin domain, structural genomics, PSI, protein structure initiative; NMR {Mycobacterium tuberculosis} SCOP: b.118.1.1

Probab=99.91  E-value=4.9e-25  Score=199.65  Aligned_cols=128  Identities=20%  Similarity=0.262  Sum_probs=111.0

Q ss_pred             CCCHHHHHHhcC-hHHHHHHHH-----HcCchhhhcccCCCCeEEEecCcHHHHhhhh-hhhcc--cHHHHHhhcccccc
Q 013841          222 GLNLTAIMAKQG-CKAFADLLI-----ATGAHTTFEENLDGGLTVFCPTDAVVNDFMP-KYKNL--TEAHKVSLLLYHGT  292 (435)
Q Consensus       222 ~~~i~~~L~~~g-~stf~~lL~-----~agL~~~L~~~~~~~~TVFAPTD~AF~~l~~-~l~~l--~~~~L~~lL~YHvv  292 (435)
                      ..+|.++|++++ |++|.++|+     ++||.+.|++.  + ||||||+|+||+++.. .++.|  +.++|+++|+|||+
T Consensus        27 ~~~i~~~l~~~~~~s~f~~~l~~~~~~~agl~~~L~~~--g-~TvFAPtn~AF~~l~~~~~~~L~~~~~~L~~iL~yHvv  103 (163)
T 1nyo_A           27 QDPVAVAASNNPELTTLTAALSGQLNPQVNLVDTLNSG--Q-YTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVV  103 (163)
T ss_dssp             HSCHHHHHTTSTTTHHHHHHHHSSSCTTCCCHHHHTSS--S-EEECCBCHHHHHHSCHHHHHHHTTCSSHHHHHHHHTEE
T ss_pred             CcCHHHHHHhCCCHHHHHHHHHhccccccCHHHHhCCC--C-cEEEEECHHHHHhccHHHHHHHhcCHHHHHHHHHhceE
Confidence            358999999888 999999999     99999999987  6 9999999999999954 56665  45789999999999


Q ss_pred             ccccchhhhcccCccccccccCCCcceEEEEEEcCCeEEEeeCcccceEEeeeccCCCeEEEEeCCccCCCC
Q 013841          293 PVYQSLQTLKSSNGVMNTLATDGASKYDFTVQNDGEIVTLKTKATTAKITGTLKDEEPLVIYKINKVLLPIE  364 (435)
Q Consensus       293 p~~~~~~~l~~~~~~~~Tlag~~~~~~~l~v~~~g~~v~v~~gv~~a~V~~~~~~~~ngvIh~ID~VL~P~~  364 (435)
                      ++.+..++|.   +.++|+.|.     .|+|+..++.++|+    +++|+..++...|||||+||+||+|+.
T Consensus       104 ~g~~~~~~l~---g~~~Tl~G~-----~l~v~~~~~~v~vn----~a~V~~~di~a~NGvIHvID~VL~P~~  163 (163)
T 1nyo_A          104 AGQTSPANVV---GTRQTLQGA-----SVTVTGQGNSLKVG----NADVVCGGVSTANATVYMIDSVLMPPA  163 (163)
T ss_dssp             ESCCCTTTSC---EEEECTTSS-----EEEEEECSSCEEET----TEECSSBCCCCSSEEEBCBSSCCCCCC
T ss_pred             CCEEcHHHhC---CccccCCCC-----EEEEEEECCEEEEe----ccEEEECceEcCCEEEEEECcEeCCCC
Confidence            9999999886   578898763     68888888888885    488888888889999999999999973

>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1

Probab=99.83  E-value=7.8e-21  Score=189.53  Aligned_cols=137  Identities=13%  Similarity=0.183  Sum_probs=103.6

Q ss_pred             CCHHHHHH------hcC-hHHHHHHHHHcC--chhhhcccCCCCeEEEecCcHHHHhhh-hhhhcccHHHHHhhcccccc
Q 013841          223 LNLTAIMA------KQG-CKAFADLLIATG--AHTTFEENLDGGLTVFCPTDAVVNDFM-PKYKNLTEAHKVSLLLYHGT  292 (435)
Q Consensus       223 ~~i~~~L~------~~g-~stf~~lL~~ag--L~~~L~~~~~~~~TVFAPTD~AF~~l~-~~l~~l~~~~L~~lL~YHvv  292 (435)
                      .||+++|+      +.+ |++|.++|+++|  |.++|++.  ++||||||+|+||+++. ..+. .+.+.|+++|+|||+
T Consensus         6 ~~i~~~L~~~~~~~~~~~~s~~~~~l~~ag~~l~~~L~~~--~~~TvFAPtn~Af~~~~~~~l~-~~~~~l~~iL~yHvv   82 (324)
T 1o70_A            6 TTVTQFLQSFKENAENGALRKFYEVIMDNGGAVLDDINSL--TEVTILAPSNEAWNSSNINNVL-RDRNKMRQILNMHII   82 (324)
T ss_dssp             -------------CCHHHHHHHHHHHHHTCSHHHHHHHTC--SSEEEEEECHHHHHHTCTHHHH-TCHHHHHHHHHHTEE
T ss_pred             hhHHHHHHHHHhhhcCCcHHHHHHHHHHHhHHHHHHHcCC--CCeEEEEEChHhhhcccHhhhh-CCHHHHHHHHHhcEe
Confidence            58888888      455 999999999999  99999987  89999999999998862 2221 267899999999999


Q ss_pred             ccccchhhhcccCc----cccccccCCCcceEEEEEEc--CCeEEEeeCcccceEEeeeccCCCeEEEEeCCccCCCC
Q 013841          293 PVYQSLQTLKSSNG----VMNTLATDGASKYDFTVQND--GEIVTLKTKATTAKITGTLKDEEPLVIYKINKVLLPIE  364 (435)
Q Consensus       293 p~~~~~~~l~~~~~----~~~Tlag~~~~~~~l~v~~~--g~~v~v~~gv~~a~V~~~~~~~~ngvIh~ID~VL~P~~  364 (435)
                      ++++...+|....+    .++|+.|..  .+.+++...  ++.++++.+..+|+|+..++...|||||+||+||+|+.
T Consensus        83 ~g~~~~~~l~~~~~~~~~~~~Tl~g~~--~l~~~v~~~~~~~~v~v~~g~~~a~v~~~di~~~NGvIhvID~VL~pp~  158 (324)
T 1o70_A           83 KDRLNVDKIRQKNANLIAQVPTVNNNT--FLYFNVRGEGSDTVITVEGGGVNATVIQADVAQTNGYVHIIDHVLGVPY  158 (324)
T ss_dssp             SSCCCHHHHHHHTSSSCCCEEBSSTTC--EEEEEEESCGGGCEEEEEETTEEEEEEEEEEECSSEEEEEESSCTTSCC
T ss_pred             CCeecHHHHhhccCCCceEEEcCCCCc--eEEEEEeecCCceEEEEcCCceeEEEEeccccccCcEEEEEchhhhhch
Confidence            99999999875431    578887641  245566532  34688877656799998888999999999999999964

>1w7d_A Fasciclin-like protein; cell adhesion; NMR {Rhodobacter sphaeroides} PDB: 1w7e_A

Probab=99.82  E-value=1.3e-20  Score=165.54  Aligned_cols=128  Identities=21%  Similarity=0.243  Sum_probs=100.2

Q ss_pred             cccHHHHHccCCCcHHHHHHHHHhchhhHhcCCCceEEEEeCcHHHHhhhhcC---C----CHHHHHHHHhhcccccccC
Q 013841           60 AHNITRILAKHPEFSTFNHYLTVTHLAAEINRRQTITVLALDNSAMSSLLSKQ---L----SVYTLRNVLSLHVLTDYFG  132 (435)
Q Consensus        60 a~ni~~~L~~~~~~Stf~~lL~~tgL~~~L~~~~~~TVfAPtN~AF~~l~~~~---~----~~~~L~~lL~yHVl~~~~~  132 (435)
                      .+||.++|.++++||+|.++|+++||.+.|++.++||||||+|+||+++..+.   +    +.+.|+++|+|||+++++.
T Consensus         2 ~~~i~~~l~~~~~~s~f~~~l~~agl~~~L~~~~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~~~l~~lL~yHvv~~~~~   81 (137)
T 1w7d_A            2 TGDIVETATGAGSFTTLLTAAEAAGLVDTLKGDGPFTVFAPTDAAFAALPEGTVEDLLKPENKEKLTEILTYHVVPGEVM   81 (137)
T ss_dssp             CSTTGGGGGSCSSSTTTTHHHHHTTTHHHHTSSSCEEEECCCHHHHTTSTTTHHHHTTSHHHHHHHHHHHHHHEEESCCC
T ss_pred             CCCHHHHHHhCCCHHHHHHHHHHcCCHHHHcCCCCEEEEEECHHHHHHcCHhHHHHHhCcCCHHHHHHHHHhhEeCcEEc
Confidence            46899999999999999999999999999999999999999999999986531   2    5778999999999999999


Q ss_pred             ccccccccCCceeecccccccCCCCCCCCeEEEEEcCCCeEEEccccCCCccceeEeeecccccccceeeeeecccccC
Q 013841          133 SKKLHQITNGTALTSSMFQATGSAPGSSGYVNVTDLKGGKVGFGAEDNDGKLDATYVKSVAEFPYNISVLQISQVLNSD  211 (435)
Q Consensus       133 s~~L~~l~~g~~l~~Tl~q~tg~a~~~~g~vnit~~~~g~V~~~~~~~g~~~~atvv~~v~~~~~ng~V~~Id~vL~p~  211 (435)
                      +++|.   ++.. ++|+.   |      ..+.|+. .+| +.++.        +.+++. +....||+||.||+||.|+
T Consensus        82 ~~~l~---~~~~-~~tl~---G------~~l~v~~-~~g-v~vn~--------a~v~~~-di~~~NGvIHvID~VL~P~  136 (137)
T 1w7d_A           82 SSDLT---EGMT-AETVE---G------GALTVTL-EGG-PKVNG--------VSISQP-DVDASNGVIHVIDGVLMPG  136 (137)
T ss_dssp             TTTSC---SSEE-EECTT---S------CEEEEEC-TTS-CEETT--------EECSBC-CCBCSSSEEEBCSSCCSSC
T ss_pred             HHHhc---CCCe-eeccC---C------ceEEEEe-cCC-EEEeC--------cEEEEC-CeecCCeEEEEECeeeCCC
Confidence            98884   3422 45541   1      3477775 456 77742        333332 1234699999999999986

>2vxp_A Transforming growth factor-beta-induced protein IG-H3; RGD-containing collagen-associated protein, FAS1, BIGH3, vision, amyloid, RGD-CAP, secreted; 2.5A {Homo sapiens} PDB: 1x3b_A

Probab=99.81  E-value=1.9e-19  Score=157.13  Aligned_cols=126  Identities=21%  Similarity=0.221  Sum_probs=97.1

Q ss_pred             ccHHHHHccCCCcHHHHHHHHHhchhhHhcCCCceEEEEeCcHHHHhhhhcC-----CCHHHHHHHHhhcccccccCccc
Q 013841           61 HNITRILAKHPEFSTFNHYLTVTHLAAEINRRQTITVLALDNSAMSSLLSKQ-----LSVYTLRNVLSLHVLTDYFGSKK  135 (435)
Q Consensus        61 ~ni~~~L~~~~~~Stf~~lL~~tgL~~~L~~~~~~TVfAPtN~AF~~l~~~~-----~~~~~L~~lL~yHVl~~~~~s~~  135 (435)
                      ++|.++|.++++||+|.++++++||.+.|++.++||||||+|+||++++.+.     .+++.|+++|+|||+++.+.+.+
T Consensus         2 ~ti~~~l~~~~~fs~~~~~l~~agl~~~L~~~~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~l~~iL~yHvv~~~~~~~~   81 (132)
T 2vxp_A            2 GTVMDVLKGDNRFSMLVAAIQSAGLTETLNREGVYTVFAPTNEAFRALPPRERSRLLGDAKELANILKYHIGDEILVSGG   81 (132)
T ss_dssp             CCHHHHHTTSTTCHHHHHHHHHHTCHHHHHSSCCEEEEEECHHHHHHSCHHHHHHHHTCHHHHHHHHHHSBBSSCCCSTT
T ss_pred             ccHHHHHHcCCCHHHHHHHHHHcCcHHHHcCCCCEEEEeECHHHHHhhCHHHHHHHhcCHHHHHHHHHhcCcCceeehhh
Confidence            5799999999999999999999999999999999999999999999986542     26789999999999999988877


Q ss_pred             cccccCCceeecccccccCCCCCCCCeEEEEEcCCCeEEEccccCCCccceeEeeecccccccceeeeeecccc
Q 013841          136 LHQITNGTALTSSMFQATGSAPGSSGYVNVTDLKGGKVGFGAEDNDGKLDATYVKSVAEFPYNISVLQISQVLN  209 (435)
Q Consensus       136 L~~l~~g~~l~~Tl~q~tg~a~~~~g~vnit~~~~g~V~~~~~~~g~~~~atvv~~v~~~~~ng~V~~Id~vL~  209 (435)
                      +.   .+ ..++|+.   |      ..+.|+. .+|.+.++.        +.+++.. ....||+||.||+||+
T Consensus        82 l~---~~-~~~~tl~---G------~~l~v~~-~~~~v~vn~--------a~v~~~d-i~a~NGvIHvID~VLl  132 (132)
T 2vxp_A           82 IG---AL-VRLKSLQ---G------DKLEVSL-KNNVVSVNK--------EPVAEPD-IMATNGVVHVITNVLQ  132 (132)
T ss_dssp             CS---SC-EEEEBTT---S------SEEEEEE-ETTEEEESS--------CBEEEEE-EEETTEEEEEESSCC-
T ss_pred             cc---CC-ceEecCC---C------CEEEEEE-eCCEEEEec--------cEEEEcc-eecCCEEEEEECcEeC
Confidence            73   22 2345542   1      2466765 466777742        2344321 2246999999999984

>1nyo_A Immunogenic protein MPT70; seven-stranded beta-barrel, fasciclin domain, structural genomics, PSI, protein structure initiative; NMR {Mycobacterium tuberculosis} SCOP: b.118.1.1

Probab=99.78  E-value=3.7e-19  Score=160.94  Aligned_cols=127  Identities=25%  Similarity=0.329  Sum_probs=99.5

Q ss_pred             CcccHHHHHccCCCcHHHHHHHH-----HhchhhHhcCCCceEEEEeCcHHHHhhhhcC-----CCHHHHHHHHhhcccc
Q 013841           59 HAHNITRILAKHPEFSTFNHYLT-----VTHLAAEINRRQTITVLALDNSAMSSLLSKQ-----LSVYTLRNVLSLHVLT  128 (435)
Q Consensus        59 ~a~ni~~~L~~~~~~Stf~~lL~-----~tgL~~~L~~~~~~TVfAPtN~AF~~l~~~~-----~~~~~L~~lL~yHVl~  128 (435)
                      ...+|.++|.++++||+|.++|+     ++||.+.|++.+ ||||||+|+||+++....     .+++.|+++|+|||++
T Consensus        26 ~~~~i~~~l~~~~~~s~f~~~l~~~~~~~agl~~~L~~~g-~TvFAPtn~AF~~l~~~~~~~L~~~~~~L~~iL~yHvv~  104 (163)
T 1nyo_A           26 SQDPVAVAASNNPELTTLTAALSGQLNPQVNLVDTLNSGQ-YTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVVA  104 (163)
T ss_dssp             HHSCHHHHHTTSTTTHHHHHHHHSSSCTTCCCHHHHTSSS-EEECCBCHHHHHHSCHHHHHHHTTCSSHHHHHHHHTEEE
T ss_pred             CCcCHHHHHHhCCCHHHHHHHHHhccccccCHHHHhCCCC-cEEEEECHHHHHhccHHHHHHHhcCHHHHHHHHHhceEC
Confidence            35799999999999999999999     999999999988 999999999999986431     1457899999999999


Q ss_pred             cccCccccccccCCceeecccccccCCCCCCCCeEEEEEcCCCeEEEccccCCCccceeEeeecccccccceeeeeeccc
Q 013841          129 DYFGSKKLHQITNGTALTSSMFQATGSAPGSSGYVNVTDLKGGKVGFGAEDNDGKLDATYVKSVAEFPYNISVLQISQVL  208 (435)
Q Consensus       129 ~~~~s~~L~~l~~g~~l~~Tl~q~tg~a~~~~g~vnit~~~~g~V~~~~~~~g~~~~atvv~~v~~~~~ng~V~~Id~vL  208 (435)
                      +++.+++|.    +  .++|+.   |      ..++|+. .++.+.++.        +.+++. +....||+||.||+||
T Consensus       105 g~~~~~~l~----g--~~~Tl~---G------~~l~v~~-~~~~v~vn~--------a~V~~~-di~a~NGvIHvID~VL  159 (163)
T 1nyo_A          105 GQTSPANVV----G--TRQTLQ---G------ASVTVTG-QGNSLKVGN--------ADVVCG-GVSTANATVYMIDSVL  159 (163)
T ss_dssp             SCCCTTTSC----E--EEECTT---S------SEEEEEE-CSSCEEETT--------EECSSB-CCCCSSEEEBCBSSCC
T ss_pred             CEEcHHHhC----C--ccccCC---C------CEEEEEE-ECCEEEEec--------cEEEEC-ceEcCCEEEEEECcEe
Confidence            999999883    2  245541   1      3477775 456677742        334432 1234699999999999


Q ss_pred             ccC
Q 013841          209 NSD  211 (435)
Q Consensus       209 ~p~  211 (435)
                      +|+
T Consensus       160 ~P~  162 (163)
T 1nyo_A          160 MPP  162 (163)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            986

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	435
d1o70a1	140	b.118.1.1 (A:328-467) Fasciclin I {Fruit fly (Dros	9e-11
d1o70a2	157	b.118.1.1 (A:468-624) Fasciclin I {Fruit fly (Dros	4e-06
d1nyoa_	163	b.118.1.1 (A:) Immunogenic protein MPT70 {Mycobact	0.002

>d1o70a1 b.118.1.1 (A:328-467) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 140

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 57.5 bits (138), Expect = 9e-11
 Identities = 16/134 (11%), Positives = 44/134 (32%), Gaps = 4/134 (2%)

Query: 233 GCKAFADLLIATGAHTTFEENLDGGLTVFCPTDAVVNDFMPKYKNLTEAHKVSLLLYHGT 292
             + F ++++  G     + N    +T+  P++   N                +L  H  
Sbjct: 5   ALRKFYEVIMDNGGAVLDDINSLTEVTILAPSNEAWNSSNINNVLRDRNKMRQILNMHII 64

Query: 293 P-VYQSLQTLKSSNGVMNTLAT-DGASKYDFTVQNDGEIVTLKTKAT--TAKITGTLKDE 348
                  +  + +  ++  + T +  +   F V+ +G    +  +     A +      +
Sbjct: 65  KDRLNVDKIRQKNANLIAQVPTVNNNTFLYFNVRGEGSDTVITVEGGGVNATVIQADVAQ 124

Query: 349 EPLVIYKINKVLLP 362
               ++ I+ VL  
Sbjct: 125 TNGYVHIIDHVLGV 138

>d1o70a2 b.118.1.1 (A:468-624) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 157

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 44.5 bits (104), Expect = 4e-06
 Identities = 18/137 (13%), Positives = 35/137 (25%), Gaps = 12/137 (8%)

Query: 237 FADLLIATGAHTTFEENLDGGLTVFCPTDAVVNDFMPKYKNLTE--------AHKVSLLL 288
              +   +  +     N     T F P D         Y +  +         H  S+L 
Sbjct: 16  TYKMGKFSHFNDQLN-NTQRRFTYFVPRDKGWQKTELDYPSAHKKLFMADFSYHSKSILE 74

Query: 289 YH---GTPVYQSLQTLKSSNGVMNTLATDGASKYDFTVQNDGEIVTLKTKATTAKITGTL 345
            H       Y     +K S    + +           V+ +     +        +    
Sbjct: 75  RHLAISDKEYTMKDLVKFSQESGSVILPTFRDSLSIRVEEEAGRYVIIWNYKKINVYRPD 134

Query: 346 KDEEPLVIYKINKVLLP 362
            +    +I+ I+  LL 
Sbjct: 135 VECTNGIIHVIDYPLLE 151

>d1nyoa_ b.118.1.1 (A:) Immunogenic protein MPT70 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 163

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Immunogenic protein MPT70
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 36.7 bits (84), Expect = 0.002
 Identities = 28/165 (16%), Positives = 51/165 (30%), Gaps = 24/165 (14%)

Query: 210 SDEAEAPTPGPSGLNLTAIM----AKQGCKAFADLLIATGAHTTFEENL-----DGGLTV 260
           ++ A A   GP+ +   +      A         L  A       + NL      G  TV
Sbjct: 9   AEYAAANPTGPASVQGMSQDPVAVAASNNPELTTLTAALSGQLNPQVNLVDTLNSGQYTV 68

Query: 261 FCPTDAVVNDFMPKYKNLTEAHKVSL---LLYHGTPVYQSLQTLKSSNGVMNTLATDGAS 317
           F PT+A  +       +  + +   L   L YH      S   +  +   +   +     
Sbjct: 69  FAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVVAGQTSPANVVGTRQTLQGASVTVTG 128

Query: 318 KYDFTVQNDGEIVTLKTKATTAKITGTLKDEEPLVIYKINKVLLP 362
           + +     + ++V        A             +Y I+ VL+P
Sbjct: 129 QGNSLKVGNADVVCGGVSTANA------------TVYMIDSVLMP 161

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	435
d1nyoa_	163	Immunogenic protein MPT70 {Mycobacterium tuberculo	99.88
d1o70a1	140	Fasciclin I {Fruit fly (Drosophila melanogaster) [	99.84
d1o70a2	157	Fasciclin I {Fruit fly (Drosophila melanogaster) [	99.83
d1nyoa_	163	Immunogenic protein MPT70 {Mycobacterium tuberculo	99.76
d1o70a1	140	Fasciclin I {Fruit fly (Drosophila melanogaster) [	99.66
d1o70a2	157	Fasciclin I {Fruit fly (Drosophila melanogaster) [	99.63

>d1nyoa_ b.118.1.1 (A:) Immunogenic protein MPT70 {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Immunogenic protein MPT70
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.88  E-value=1.3e-23  Score=188.15  Aligned_cols=127  Identities=21%  Similarity=0.282  Sum_probs=106.3

Q ss_pred             CCHHHHHHhcC-hHHHHHHHH-----HcCchhhhcccCCCCeEEEecCcHHHHhhhh-hhhcc--cHHHHHhhccccccc
Q 013841          223 LNLTAIMAKQG-CKAFADLLI-----ATGAHTTFEENLDGGLTVFCPTDAVVNDFMP-KYKNL--TEAHKVSLLLYHGTP  293 (435)
Q Consensus       223 ~~i~~~L~~~g-~stf~~lL~-----~agL~~~L~~~~~~~~TVFAPTD~AF~~l~~-~l~~l--~~~~L~~lL~YHvvp  293 (435)
                      .++.+.++.++ |++|..+++     ++||.++|++   ++||||||||+||+++.. .++.+  +++.|+++|+|||++
T Consensus        28 ~~v~~~a~~~p~lstl~~Al~a~~~~~a~L~~~L~~---gpfTvFAPtn~AF~~l~~~~~~~l~~~~~~L~~iL~yHVv~  104 (163)
T d1nyoa_          28 DPVAVAASNNPELTTLTAALSGQLNPQVNLVDTLNS---GQYTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVVA  104 (163)
T ss_dssp             SCHHHHHTTSTTTHHHHHHHHSSSCTTCCCHHHHTS---SSEEECCBCHHHHHHSCHHHHHHHTTCSSHHHHHHHHTEEE
T ss_pred             chHHHHHhcCCchHHHHHHHhhccccccchhHhhcC---CCeEEEEECcHHHHhcCHHHHHhhhhhHHHHHHhhhhhhhh
Confidence            46888888777 999999998     4899999984   789999999999999943 45544  346899999999999


Q ss_pred             cccchhhhcccCccccccccCCCcceEEEEEEcCCeEEEeeCcccceEEeeeccCCCeEEEEeCCccCCCC
Q 013841          294 VYQSLQTLKSSNGVMNTLATDGASKYDFTVQNDGEIVTLKTKATTAKITGTLKDEEPLVIYKINKVLLPIE  364 (435)
Q Consensus       294 ~~~~~~~l~~~~~~~~Tlag~~~~~~~l~v~~~g~~v~v~~gv~~a~V~~~~~~~~ngvIh~ID~VL~P~~  364 (435)
                      +.+...++.   +.++|+.|.     .+.|+..++.++|+    +++|+..++...|||||+||+||+||.
T Consensus       105 g~~~~~~l~---~~~~Tl~G~-----~l~v~~~~~~i~v~----~a~Vv~~di~a~NGvIHvID~VLlPPa  163 (163)
T d1nyoa_         105 GQTSPANVV---GTRQTLQGA-----SVTVTGQGNSLKVG----NADVVCGGVSTANATVYMIDSVLMPPA  163 (163)
T ss_dssp             SCCCTTTSC---EEEECTTSS-----EEEEEECSSCEEET----TEECSSBCCCCSSEEEBCBSSCCCCCC
T ss_pred             hhhhhhhhh---hhhhhccCc-----ceeEEecCCEEEEe----ceEEEECCeecCCcEEEEECccccCCC
Confidence            998888875   357788763     67888888888885    578888888889999999999999984

>d1o70a1 b.118.1.1 (A:328-467) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.84  E-value=1.5e-21  Score=169.03  Aligned_cols=126  Identities=13%  Similarity=0.177  Sum_probs=96.2

Q ss_pred             hHHHHHHHHHcC--chhhhcccCCCCeEEEecCcHHHHhhhhhhhcccHHHHHhhccccccccccchhhhcccC----cc
Q 013841          234 CKAFADLLIATG--AHTTFEENLDGGLTVFCPTDAVVNDFMPKYKNLTEAHKVSLLLYHGTPVYQSLQTLKSSN----GV  307 (435)
Q Consensus       234 ~stf~~lL~~ag--L~~~L~~~~~~~~TVFAPTD~AF~~l~~~l~~l~~~~L~~lL~YHvvp~~~~~~~l~~~~----~~  307 (435)
                      |++|.++|+++|  +.++|++.  +++|||||||+||+++....-..+.++|+.+|+||++++.+...++....    ..
T Consensus         6 ~~~f~~~i~~~g~~~~~~l~~~--~~~TvFAPtn~Af~~~~~~~~~~~~~~l~~~l~yHiv~~~~~~~~l~~~~~~~~~~   83 (140)
T d1o70a1           6 LRKFYEVIMDNGGAVLDDINSL--TEVTILAPSNEAWNSSNINNVLRDRNKMRQILNMHIIKDRLNVDKIRQKNANLIAQ   83 (140)
T ss_dssp             HHHHHHHHHHTCSHHHHHHHTC--SSEEEEEECHHHHHHTCTHHHHTCHHHHHHHHHHTEESSCCCHHHHHHHTSSSCCC
T ss_pred             HHHHHHHHHHHHHHHHHHhcCC--CCEEEEEECHHHHhcCChhhhcCCHHHHHHHHHhhccCCeEEHHHHhcCcccCceE
Confidence            999999999987  78889987  89999999999999884321123678899999999999999988887432    13


Q ss_pred             ccccccCCCcceEEEEEEcC--CeEEEeeCcccceEEeeeccCCCeEEEEeCCccCCC
Q 013841          308 MNTLATDGASKYDFTVQNDG--EIVTLKTKATTAKITGTLKDEEPLVIYKINKVLLPI  363 (435)
Q Consensus       308 ~~Tlag~~~~~~~l~v~~~g--~~v~v~~gv~~a~V~~~~~~~~ngvIh~ID~VL~P~  363 (435)
                      ++|+.++  ..+.+++..++  ..+.+..+...|+|+..++...|||||+||+||.||
T Consensus        84 ~~t~~g~--~~~~~~~~~~~~~~~~~~~~~~~~a~V~~~Di~~~NGvIH~ID~VL~~P  139 (140)
T d1o70a1          84 VPTVNNN--TFLYFNVRGEGSDTVITVEGGGVNATVIQADVAQTNGYVHIIDHVLGVP  139 (140)
T ss_dssp             EEBSSTT--CEEEEEEESCGGGCEEEEEETTEEEEEEEEEEECSSEEEEEESSCTTSC
T ss_pred             eeecCCC--ceEEEEEeccceeEEEEecCCcceEEEEeCCEecCCeEEEEECCccCCc
Confidence            5565543  12334444332  244555556789999999999999999999999997

>d1o70a2 b.118.1.1 (A:468-624) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.83  E-value=1e-20  Score=167.00  Aligned_cols=136  Identities=11%  Similarity=0.047  Sum_probs=102.8

Q ss_pred             CHHHHHHhcC-hHHHHHHHHHcCchhhhcccCCCCeEEEecCcHHHHhhhhh--------hhcccHHHHHhhcccccccc
Q 013841          224 NLTAIMAKQG-CKAFADLLIATGAHTTFEENLDGGLTVFCPTDAVVNDFMPK--------YKNLTEAHKVSLLLYHGTPV  294 (435)
Q Consensus       224 ~i~~~L~~~g-~stf~~lL~~agL~~~L~~~~~~~~TVFAPTD~AF~~l~~~--------l~~l~~~~L~~lL~YHvvp~  294 (435)
                      +|.++|+.++ |+.|.++++.+|+.+.|++. .+.||||||+|+||+++...        +....++.++.+|+||++++
T Consensus         2 Ti~~~l~~~p~ls~~~~~~~~s~l~~~L~~~-~~~~TvFaPtn~Af~~l~~~~~~~~~~~~~~~~~~~l~~il~~Hiv~g   80 (157)
T d1o70a2           2 TVLGKLESDPMMSDTYKMGKFSHFNDQLNNT-QRRFTYFVPRDKGWQKTELDYPSAHKKLFMADFSYHSKSILERHLAIS   80 (157)
T ss_dssp             CHHHHHHHCGGGHHHHHHTTTTTTTGGGGCS-SSEEEEEEECHHHHHHHHHHCHHHHHHHTSGGGHHHHHHHHHTTEEEE
T ss_pred             cHHHHHHhCccHHHHHHHHHhCCHHHHHhCC-CCceEEEecCHHHHHHhhhhccchhhhhcCcccHHHHHHHheeEEecc
Confidence            6899999998 99999999999999999875 36899999999999998321        11224578999999999997


Q ss_pred             ccchh--hhccc----Cc-cccccccCCCcceEEEEEEcCCeEEEeeCcccceEEeeeccCCCeEEEEeCCccCCCC
Q 013841          295 YQSLQ--TLKSS----NG-VMNTLATDGASKYDFTVQNDGEIVTLKTKATTAKITGTLKDEEPLVIYKINKVLLPIE  364 (435)
Q Consensus       295 ~~~~~--~l~~~----~~-~~~Tlag~~~~~~~l~v~~~g~~v~v~~gv~~a~V~~~~~~~~ngvIh~ID~VL~P~~  364 (435)
                      .....  .+...    .. ...++.    +++.+.+...++.+.+....+.|+|+..++.+.|||||+||+||+|+.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~a~V~~~Di~a~NGviHvID~VLlp~~  153 (157)
T d1o70a2          81 DKEYTMKDLVKFSQESGSVILPTFR----DSLSIRVEEEAGRYVIIWNYKKINVYRPDVECTNGIIHVIDYPLLEEK  153 (157)
T ss_dssp             SSCCCHHHHHHHHHHSSSEEEECSS----SEEEEEEEEETTEEEEEETTEEEEEEEEEEEETTEEEEEESSCSCCTT
T ss_pred             cccchhhhhhhhhccCCceeEEecC----CcEEEEEEcCCcEEEEecCCccceEEECCEecCCeEEEEECceecCCC
Confidence            43322  22110    01 122322    346677777788777766667899999999999999999999999953

>d1nyoa_ b.118.1.1 (A:) Immunogenic protein MPT70 {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Immunogenic protein MPT70
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.76  E-value=4.2e-19  Score=158.42  Aligned_cols=125  Identities=23%  Similarity=0.296  Sum_probs=95.7

Q ss_pred             ccHHHHHccCCCcHHHHHHHH-----HhchhhHhcCCCceEEEEeCcHHHHhhhhcC-----CCHHHHHHHHhhcccccc
Q 013841           61 HNITRILAKHPEFSTFNHYLT-----VTHLAAEINRRQTITVLALDNSAMSSLLSKQ-----LSVYTLRNVLSLHVLTDY  130 (435)
Q Consensus        61 ~ni~~~L~~~~~~Stf~~lL~-----~tgL~~~L~~~~~~TVfAPtN~AF~~l~~~~-----~~~~~L~~lL~yHVl~~~  130 (435)
                      .++...++++|+||+|..+|+     ++||.+.|++ ++||||||+|+||.++....     .+++.|+++|+|||++++
T Consensus        28 ~~v~~~a~~~p~lstl~~Al~a~~~~~a~L~~~L~~-gpfTvFAPtn~AF~~l~~~~~~~l~~~~~~L~~iL~yHVv~g~  106 (163)
T d1nyoa_          28 DPVAVAASNNPELTTLTAALSGQLNPQVNLVDTLNS-GQYTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVVAGQ  106 (163)
T ss_dssp             SCHHHHHTTSTTTHHHHHHHHSSSCTTCCCHHHHTS-SSEEECCBCHHHHHHSCHHHHHHHTTCSSHHHHHHHHTEEESC
T ss_pred             chHHHHHhcCCchHHHHHHHhhccccccchhHhhcC-CCeEEEEECcHHHHhcCHHHHHhhhhhHHHHHHhhhhhhhhhh
Confidence            578888999999999999998     4899999986 89999999999999986531     245689999999999999


Q ss_pred             cCccccccccCCceeecccccccCCCCCCCCeEEEEEcCCCeEEEccccCCCccceeEeeecccccccceeeeeeccccc
Q 013841          131 FGSKKLHQITNGTALTSSMFQATGSAPGSSGYVNVTDLKGGKVGFGAEDNDGKLDATYVKSVAEFPYNISVLQISQVLNS  210 (435)
Q Consensus       131 ~~s~~L~~l~~g~~l~~Tl~q~tg~a~~~~g~vnit~~~~g~V~~~~~~~g~~~~atvv~~v~~~~~ng~V~~Id~vL~p  210 (435)
                      +..+++.   +   ..+|+-         ...+.++. .++.+.++.        ++++.. +....||+||.||+||+|
T Consensus       107 ~~~~~l~---~---~~~Tl~---------G~~l~v~~-~~~~i~v~~--------a~Vv~~-di~a~NGvIHvID~VLlP  161 (163)
T d1nyoa_         107 TSPANVV---G---TRQTLQ---------GASVTVTG-QGNSLKVGN--------ADVVCG-GVSTANATVYMIDSVLMP  161 (163)
T ss_dssp             CCTTTSC---E---EEECTT---------SSEEEEEE-CSSCEEETT--------EECSSB-CCCCSSEEEBCBSSCCCC
T ss_pred             hhhhhhh---h---hhhhcc---------CcceeEEe-cCCEEEEec--------eEEEEC-CeecCCcEEEEECccccC
Confidence            9988873   1   134431         13466765 566777752        333332 123469999999999999


Q ss_pred             C
Q 013841          211 D  211 (435)
Q Consensus       211 ~  211 (435)
                      |
T Consensus       162 P  162 (163)
T d1nyoa_         162 P  162 (163)
T ss_dssp             C
T ss_pred             C
Confidence            7

>d1o70a1 b.118.1.1 (A:328-467) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.66  E-value=2.7e-17  Score=141.76  Aligned_cols=132  Identities=20%  Similarity=0.243  Sum_probs=87.5

Q ss_pred             cCCCcHHHHHHHHHhc--hhhHhcCCCceEEEEeCcHHHHhhhhcC--CCHHHHHHHHhhcccccccCccccccccCC-c
Q 013841           69 KHPEFSTFNHYLTVTH--LAAEINRRQTITVLALDNSAMSSLLSKQ--LSVYTLRNVLSLHVLTDYFGSKKLHQITNG-T  143 (435)
Q Consensus        69 ~~~~~Stf~~lL~~tg--L~~~L~~~~~~TVfAPtN~AF~~l~~~~--~~~~~L~~lL~yHVl~~~~~s~~L~~l~~g-~  143 (435)
                      +++.|++|.++|+++|  +.+.|++.+++|||||+|+||+++....  .+.+.|+.+|+|||+++++...+|...... .
T Consensus         2 ~~~~~~~f~~~i~~~g~~~~~~l~~~~~~TvFAPtn~Af~~~~~~~~~~~~~~l~~~l~yHiv~~~~~~~~l~~~~~~~~   81 (140)
T d1o70a1           2 ENGALRKFYEVIMDNGGAVLDDINSLTEVTILAPSNEAWNSSNINNVLRDRNKMRQILNMHIIKDRLNVDKIRQKNANLI   81 (140)
T ss_dssp             CHHHHHHHHHHHHHTCSHHHHHHHTCSSEEEEEECHHHHHHTCTHHHHTCHHHHHHHHHHTEESSCCCHHHHHHHTSSSC
T ss_pred             CCccHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECHHHHhcCChhhhcCCHHHHHHHHHhhccCCeEEHHHHhcCcccCc
Confidence            5678999999999986  7789999999999999999999875432  367889999999999999999888543221 1


Q ss_pred             eeecccccccCCCCCCCCeEEEEEcCC-CeEEEccccCCCccceeEeeecccccccceeeeeecccccC
Q 013841          144 ALTSSMFQATGSAPGSSGYVNVTDLKG-GKVGFGAEDNDGKLDATYVKSVAEFPYNISVLQISQVLNSD  211 (435)
Q Consensus       144 ~l~~Tl~q~tg~a~~~~g~vnit~~~~-g~V~~~~~~~g~~~~atvv~~v~~~~~ng~V~~Id~vL~p~  211 (435)
                      ..+.|+.   |   +...+.++..... ..+...    +....+.+++... ...||+||.||+||.||
T Consensus        82 ~~~~t~~---g---~~~~~~~~~~~~~~~~~~~~----~~~~~a~V~~~Di-~~~NGvIH~ID~VL~~P  139 (140)
T d1o70a1          82 AQVPTVN---N---NTFLYFNVRGEGSDTVITVE----GGGVNATVIQADV-AQTNGYVHIIDHVLGVP  139 (140)
T ss_dssp             CCEEBSS---T---TCEEEEEEESCGGGCEEEEE----ETTEEEEEEEEEE-ECSSEEEEEESSCTTSC
T ss_pred             eEeeecC---C---CceEEEEEeccceeEEEEec----CCcceEEEEeCCE-ecCCeEEEEECCccCCc
Confidence            1123321   1   1111223322111 122221    1112355555322 34699999999999987

>d1o70a2 b.118.1.1 (A:468-624) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.63  E-value=6.5e-17  Score=142.28  Aligned_cols=137  Identities=12%  Similarity=0.087  Sum_probs=89.4

Q ss_pred             cHHHHHccCCCcHHHHHHHHHhchhhHhcCC-CceEEEEeCcHHHHhhhhcC----------CCHHHHHHHHhhcccccc
Q 013841           62 NITRILAKHPEFSTFNHYLTVTHLAAEINRR-QTITVLALDNSAMSSLLSKQ----------LSVYTLRNVLSLHVLTDY  130 (435)
Q Consensus        62 ni~~~L~~~~~~Stf~~lL~~tgL~~~L~~~-~~~TVfAPtN~AF~~l~~~~----------~~~~~L~~lL~yHVl~~~  130 (435)
                      +|.+.|+.+|+||.|.++++.+||.+.|+.. ++||||||+|+||+++....          .+.+.|+.+|+|||+++.
T Consensus         2 Ti~~~l~~~p~ls~~~~~~~~s~l~~~L~~~~~~~TvFaPtn~Af~~l~~~~~~~~~~~~~~~~~~~l~~il~~Hiv~g~   81 (157)
T d1o70a2           2 TVLGKLESDPMMSDTYKMGKFSHFNDQLNNTQRRFTYFVPRDKGWQKTELDYPSAHKKLFMADFSYHSKSILERHLAISD   81 (157)
T ss_dssp             CHHHHHHHCGGGHHHHHHTTTTTTTGGGGCSSSEEEEEEECHHHHHHHHHHCHHHHHHHTSGGGHHHHHHHHHTTEEEES
T ss_pred             cHHHHHHhCccHHHHHHHHHhCCHHHHHhCCCCceEEEecCHHHHHHhhhhccchhhhhcCcccHHHHHHHheeEEeccc
Confidence            6889999999999999999999999999875 68999999999999985321          136789999999999875


Q ss_pred             cCccccc--cc--cCCceeecccccccCCCCCCCCeEEEEEcCCCeEEEccccCCCccceeEeeecccccccceeeeeec
Q 013841          131 FGSKKLH--QI--TNGTALTSSMFQATGSAPGSSGYVNVTDLKGGKVGFGAEDNDGKLDATYVKSVAEFPYNISVLQISQ  206 (435)
Q Consensus       131 ~~s~~L~--~l--~~g~~l~~Tl~q~tg~a~~~~g~vnit~~~~g~V~~~~~~~g~~~~atvv~~v~~~~~ng~V~~Id~  206 (435)
                      .......  ..  ..+.....++    +    ....+++.. .++.+.+..  .+  -.+.+++. +....||+||.||+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~~~~-~~~~~~~~~--~~--~~a~V~~~-Di~a~NGviHvID~  147 (157)
T d1o70a2          82 KEYTMKDLVKFSQESGSVILPTF----R----DSLSIRVEE-EAGRYVIIW--NY--KKINVYRP-DVECTNGIIHVIDY  147 (157)
T ss_dssp             SCCCHHHHHHHHHHSSSEEEECS----S----SEEEEEEEE-ETTEEEEEE--TT--EEEEEEEE-EEEETTEEEEEESS
T ss_pred             ccchhhhhhhhhccCCceeEEec----C----CcEEEEEEc-CCcEEEEec--CC--ccceEEEC-CEecCCeEEEEECc
Confidence            5433221  10  1111111211    1    111233333 344444321  11  12455543 22346999999999


Q ss_pred             ccccCc
Q 013841          207 VLNSDE  212 (435)
Q Consensus       207 vL~p~~  212 (435)
                      ||+|+.
T Consensus       148 VLlp~~  153 (157)
T d1o70a2         148 PLLEEK  153 (157)
T ss_dssp             CSCCTT
T ss_pred             eecCCC
Confidence            999864