Citrus Sinensis ID: 013862
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 435 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LW26 | 701 | Acyltransferase-like prot | no | no | 0.935 | 0.580 | 0.536 | 1e-118 | |
| Q9ZVN2 | 704 | Acyltransferase-like prot | no | no | 0.944 | 0.583 | 0.503 | 1e-112 |
| >sp|Q9LW26|Y3684_ARATH Acyltransferase-like protein At3g26840, chloroplastic OS=Arabidopsis thaliana GN=At3g26840 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 427 bits (1097), Expect = e-118, Method: Compositional matrix adjust.
Identities = 221/412 (53%), Positives = 282/412 (68%), Gaps = 5/412 (1%)
Query: 18 LLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSL 77
L+KLIE T++SEN R NRP+YLVGES+GACLAL VAARNP++DL LIL NPAT +
Sbjct: 165 LVKLIEETVKSENFRLPNRPIYLVGESIGACLALDVAARNPNIDLSLILVNPATHVNNFM 224
Query: 78 LQTIMPIPAELMSGQMTLTLS-YLLSLLTGDPLKMAMDSIVKGLFLQSTIQERS---QDF 133
+Q + + L G TL + GDPL +D++ +Q +D
Sbjct: 225 VQPLSGMLNVLPDGLPTLLEDIFDFGFKQGDPLTGMLDALSNEFSVQRMGGVGGGMLRDV 284
Query: 134 VAMSSYLPVLANILPKETLLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEE 193
+A+S+ LP L+ + PK+TLLWKLE+LK A A N+ + +V+A+TLIL SGRD L EE+
Sbjct: 285 LAVSANLPTLSRMFPKDTLLWKLEMLKYAIASVNSHIYSVRAETLILLSGRDHWLLKEED 344
Query: 194 GDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRRGRIVDYVSDFIPPTTIE 253
DR R LP C R+ G F LEDGVDL T IK +YRRG+ D+++D+I PTT E
Sbjct: 345 IDRYSRTLPKCIVRKLDDNGQFPLLEDGVDLATIIKCTCFYRRGKSHDHITDYIMPTTFE 404
Query: 254 VNKVYEEYRWMVDLTSSVMLSTLPDGKIVRGLSGIPSEGPVLLVGNHMLLGLEALPMVPT 313
+ + +++R ++D TS VMLSTL DG +VR L G+PSEGPVL VG HM+LG E PMV
Sbjct: 405 LKQQVDDHRLLMDGTSPVMLSTLEDGTVVRSLEGLPSEGPVLYVGYHMILGFELAPMVIQ 464
Query: 314 FVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRIMGSVPVSAINFYKLVSSKAHVLL 373
+ ERNI +R +AHPM+F N +D L D +D ++IMG VPVS N YKL+ KAHVLL
Sbjct: 465 LMTERNIHLRGLAHPMLFKNLQD-SLVDTKMFDKYKIMGGVPVSHFNIYKLLREKAHVLL 523
Query: 374 YPGGVREAFHRKGEEYKLFWPESSEFVRVAAAFGGKIVPFGVVGEDDLAQVI 425
YPGGVREA HRKGEEYKLFWPE SEFVRVA+ FG KIVPFGVVGEDD+ +++
Sbjct: 524 YPGGVREALHRKGEEYKLFWPERSEFVRVASKFGAKIVPFGVVGEDDICEIV 575
|
Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: - |
| >sp|Q9ZVN2|Y1457_ARATH Acyltransferase-like protein At1g54570, chloroplastic OS=Arabidopsis thaliana GN=At1g54570 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 405 bits (1041), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/417 (50%), Positives = 279/417 (66%), Gaps = 6/417 (1%)
Query: 15 FTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFR 74
F GLLK++E +R E N+P+YLVG+S G CLALAVAARN +DLVLIL NPATSF
Sbjct: 167 FEGLLKVVEDVLRQEQATRPNKPIYLVGDSFGGCLALAVAARNRSLDLVLILVNPATSFD 226
Query: 75 KSLLQTIMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFV 134
+S LQ ++PI E++ ++ T+ Y LS + GDP+KMA I L I++ Q
Sbjct: 227 RSPLQPLLPI-LEMVPEELHFTVPYALSFIMGDPIKMATLGIDNQLPTGVKIEKLRQRLT 285
Query: 135 -AMSSYLPVLANILPKETLLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEE 193
M L L I+P+ETLLWKL+LL+S AYAN+R+ AV+A+ L+L SG+D +LPS+EE
Sbjct: 286 KTMLPLLSELGGIIPRETLLWKLKLLRSGCAYANSRIHAVQAEVLVLASGKDMMLPSQEE 345
Query: 194 GDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRRGRIVDYVSDFIPPTTIE 253
RL L NC R F GH L LED + L+T IKG G YRR D VSDF+PP+ E
Sbjct: 346 AKRLHGLLKNCSVRCFKDNGHTLLLEDSISLLTVIKGTGKYRRSWRYDLVSDFLPPSKGE 405
Query: 254 VNKVYEEY-RWMVDLTSSVMLSTLPDGKIVRGLSGIPSEGPVLLVGNHMLLGLEALPMVP 312
+ +E ++ + SV ST+ DGKIV+GL+G+P +GPVLLVG HML+GLE PM
Sbjct: 406 LAYALDEVLGFLRNAVGSVFFSTMEDGKIVKGLAGVPDKGPVLLVGYHMLMGLELGPMSE 465
Query: 313 TFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRIMGSVPVSAINFYKLVSSKAHVL 372
F+ E+NIL R +AHP+++ + D D ++ G+ PV+A N +KL+ SK+HVL
Sbjct: 466 AFIKEKNILFRGMAHPVLYSDNDPAKAFDY--GDWIKVFGAYPVTATNLFKLLDSKSHVL 523
Query: 373 LYPGGVREAFHRKGEEYKLFWPESSEFVRVAAAFGGKIVPFGVVGEDDLAQVIKLEY 429
L+PGG REA H +GE+YKL WPE EFVR+AA FG IVPFG VGEDD+A+++ L+Y
Sbjct: 524 LFPGGAREALHNRGEQYKLIWPEQQEFVRMAARFGATIVPFGTVGEDDIAELV-LDY 579
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 435 | ||||||
| 296082298 | 629 | unnamed protein product [Vitis vinifera] | 0.942 | 0.651 | 0.656 | 1e-156 | |
| 225451551 | 693 | PREDICTED: acyltransferase-like protein | 0.942 | 0.591 | 0.656 | 1e-156 | |
| 359488450 | 689 | PREDICTED: acyltransferase-like protein | 0.965 | 0.609 | 0.630 | 1e-154 | |
| 224060307 | 720 | predicted protein [Populus trichocarpa] | 0.937 | 0.566 | 0.655 | 1e-154 | |
| 357508295 | 697 | Acyltransferase-like protein [Medicago t | 0.965 | 0.602 | 0.633 | 1e-152 | |
| 255543629 | 718 | catalytic, putative [Ricinus communis] g | 0.942 | 0.571 | 0.666 | 1e-151 | |
| 449464236 | 719 | PREDICTED: acyltransferase-like protein | 0.937 | 0.567 | 0.622 | 1e-149 | |
| 357508285 | 671 | Acyltransferase-like protein [Medicago t | 0.965 | 0.625 | 0.609 | 1e-147 | |
| 224060309 | 643 | predicted protein [Populus trichocarpa] | 0.919 | 0.622 | 0.626 | 1e-146 | |
| 356571611 | 692 | PREDICTED: acyltransferase-like protein | 0.965 | 0.606 | 0.620 | 1e-143 |
| >gi|296082298|emb|CBI21303.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 558 bits (1437), Expect = e-156, Method: Compositional matrix adjust.
Identities = 270/411 (65%), Positives = 326/411 (79%), Gaps = 1/411 (0%)
Query: 15 FTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFR 74
FT L+KL+ERT+RSEN RS N+P+YLVGESLG CLALAVAARNPD+DL LILANPATSF
Sbjct: 94 FTELVKLVERTVRSENYRSPNKPIYLVGESLGGCLALAVAARNPDIDLALILANPATSFS 153
Query: 75 KSLLQTIMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFV 134
KS LQ++MP+ LM ++ +L ++LSL+TGDPL+MA+ + KGL LQ + E Q V
Sbjct: 154 KSPLQSLMPL-LSLMPDKLNFSLPFILSLITGDPLRMAIANAEKGLPLQQRVGELPQGLV 212
Query: 135 AMSSYLPVLANILPKETLLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEG 194
A+ SYL VL ILP+ETLLWKL++L+SASA+AN+RL AVKA+ LIL SG+D+LL S+EE
Sbjct: 213 ALPSYLSVLFGILPRETLLWKLKMLRSASAFANSRLHAVKAEILILSSGKDKLLSSQEEC 272
Query: 195 DRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRRGRIVDYVSDFIPPTTIEV 254
+RLC ALPNC+ RRF GHFLFLEDGVDLVT IKG +YRR + +DY+ D+IPPT E
Sbjct: 273 ERLCHALPNCEIRRFTDSGHFLFLEDGVDLVTIIKGVSFYRRAKYLDYILDYIPPTPSEF 332
Query: 255 NKVYEEYRWMVDLTSSVMLSTLPDGKIVRGLSGIPSEGPVLLVGNHMLLGLEALPMVPTF 314
V E RW +T VMLSTL DGKIV+GL+GIPSEGP L VG HMLLG+E +P+V F
Sbjct: 333 KNVAEPIRWFNSITCPVMLSTLEDGKIVKGLAGIPSEGPTLFVGYHMLLGIETIPLVLQF 392
Query: 315 VIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRIMGSVPVSAINFYKLVSSKAHVLLY 374
+ ERNIL+R IAHPM+F + G LPDL +DT R++G+VPVS NFYKL+SSK+H LLY
Sbjct: 393 MDERNILLRGIAHPMLFKRSSGGSLPDLSRFDTIRLVGAVPVSGTNFYKLMSSKSHALLY 452
Query: 375 PGGVREAFHRKGEEYKLFWPESSEFVRVAAAFGGKIVPFGVVGEDDLAQVI 425
PGGVREA HRKGEEYKLFWPE SEFVR+AA FG KI+PFGVVGEDD QV+
Sbjct: 453 PGGVREAVHRKGEEYKLFWPEQSEFVRIAARFGAKIIPFGVVGEDDFGQVV 503
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225451551|ref|XP_002274130.1| PREDICTED: acyltransferase-like protein At1g54570, chloroplastic [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 270/411 (65%), Positives = 326/411 (79%), Gaps = 1/411 (0%)
Query: 15 FTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFR 74
FT L+KL+ERT+RSEN RS N+P+YLVGESLG CLALAVAARNPD+DL LILANPATSF
Sbjct: 158 FTELVKLVERTVRSENYRSPNKPIYLVGESLGGCLALAVAARNPDIDLALILANPATSFS 217
Query: 75 KSLLQTIMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFV 134
KS LQ++MP+ LM ++ +L ++LSL+TGDPL+MA+ + KGL LQ + E Q V
Sbjct: 218 KSPLQSLMPL-LSLMPDKLNFSLPFILSLITGDPLRMAIANAEKGLPLQQRVGELPQGLV 276
Query: 135 AMSSYLPVLANILPKETLLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEG 194
A+ SYL VL ILP+ETLLWKL++L+SASA+AN+RL AVKA+ LIL SG+D+LL S+EE
Sbjct: 277 ALPSYLSVLFGILPRETLLWKLKMLRSASAFANSRLHAVKAEILILSSGKDKLLSSQEEC 336
Query: 195 DRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRRGRIVDYVSDFIPPTTIEV 254
+RLC ALPNC+ RRF GHFLFLEDGVDLVT IKG +YRR + +DY+ D+IPPT E
Sbjct: 337 ERLCHALPNCEIRRFTDSGHFLFLEDGVDLVTIIKGVSFYRRAKYLDYILDYIPPTPSEF 396
Query: 255 NKVYEEYRWMVDLTSSVMLSTLPDGKIVRGLSGIPSEGPVLLVGNHMLLGLEALPMVPTF 314
V E RW +T VMLSTL DGKIV+GL+GIPSEGP L VG HMLLG+E +P+V F
Sbjct: 397 KNVAEPIRWFNSITCPVMLSTLEDGKIVKGLAGIPSEGPTLFVGYHMLLGIETIPLVLQF 456
Query: 315 VIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRIMGSVPVSAINFYKLVSSKAHVLLY 374
+ ERNIL+R IAHPM+F + G LPDL +DT R++G+VPVS NFYKL+SSK+H LLY
Sbjct: 457 MDERNILLRGIAHPMLFKRSSGGSLPDLSRFDTIRLVGAVPVSGTNFYKLMSSKSHALLY 516
Query: 375 PGGVREAFHRKGEEYKLFWPESSEFVRVAAAFGGKIVPFGVVGEDDLAQVI 425
PGGVREA HRKGEEYKLFWPE SEFVR+AA FG KI+PFGVVGEDD QV+
Sbjct: 517 PGGVREAVHRKGEEYKLFWPEQSEFVRIAARFGAKIIPFGVVGEDDFGQVV 567
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359488450|ref|XP_002275233.2| PREDICTED: acyltransferase-like protein At3g26840, chloroplastic-like [Vitis vinifera] gi|296082299|emb|CBI21304.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 270/428 (63%), Positives = 331/428 (77%), Gaps = 8/428 (1%)
Query: 15 FTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFR 74
FT L+KL+ERT+RSEN S N+P+YLVGESLG CLALAVAARNPD+DL LILANPATSF
Sbjct: 154 FTELVKLVERTVRSENFHSPNKPIYLVGESLGGCLALAVAARNPDIDLALILANPATSFG 213
Query: 75 KSLLQTIMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFV 134
KS LQ ++P+ ++M Q+ L + Y+LSL+TGDPL+M M + KGL LQ T+ E S+
Sbjct: 214 KSPLQPLIPL-FDVMPDQLNLGVPYVLSLMTGDPLRMVMTTAEKGLPLQQTVGEISEGLG 272
Query: 135 AMSSYLPVLANILPKETLLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEG 194
A+S+YL VL++ILP+ET LW+L++L SASAY N+RL AVKA+ LIL SG+D L S+EE
Sbjct: 273 ALSAYLSVLSDILPQETFLWRLKMLSSASAYVNSRLHAVKAEILILSSGKDHFLSSQEEA 332
Query: 195 DRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRRGRIVDYVSDFIPPTTIEV 254
+RLC LP C+ R+F GHFLFLEDG+DLVT IKG +YRR + DYVSD+IP E
Sbjct: 333 ERLCHVLPKCKIRKFANSGHFLFLEDGIDLVTIIKGVNFYRRAKYHDYVSDYIPLVPSEF 392
Query: 255 NKVYEEYRWMVDLTSSVMLSTLPDGKIVRGLSGIPSEGPVLLVGNHMLLGLEALPMVPTF 314
+ EEYRW+ TS VMLST+ DGKIVRGL+GIPSEGPVL VG HMLLGLE PMV F
Sbjct: 393 RQATEEYRWLTIATSPVMLSTMEDGKIVRGLAGIPSEGPVLFVGYHMLLGLELAPMVLQF 452
Query: 315 VIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRIMGSVPVSAINFYKLVSSKAHVLLY 374
+ ERNIL+R IAHPM+F + G LP+L T+DTFR+ G+VPVS FYKL+SSK+H+LLY
Sbjct: 453 LAERNILLRGIAHPMMFNRLRSGILPELSTFDTFRVFGAVPVSGSYFYKLMSSKSHILLY 512
Query: 375 PGGVREAFHRKGEEYKLFWPESSEFVRVAAAFGGKIVPFGVVGEDDLAQVI-------KL 427
PGG+REA HRKGEEYKLFWPESSEF+R+AA FG KIVPFGVVGEDD+ QV+ K+
Sbjct: 513 PGGMREALHRKGEEYKLFWPESSEFIRMAARFGAKIVPFGVVGEDDIGQVVIDYDDLMKI 572
Query: 428 EYFHFSLQ 435
YF ++
Sbjct: 573 PYFRAQIK 580
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224060307|ref|XP_002300134.1| predicted protein [Populus trichocarpa] gi|222847392|gb|EEE84939.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust.
Identities = 272/415 (65%), Positives = 324/415 (78%), Gaps = 7/415 (1%)
Query: 15 FTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFR 74
F L+KL+E+T+RSENC S NRP+YLVGESLGACLALAVA RNPD+DL LILANP TSF
Sbjct: 184 FIDLVKLVEQTVRSENCHSPNRPIYLVGESLGACLALAVAVRNPDIDLSLILANPGTSFE 243
Query: 75 KSLLQTIMP----IPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERS 130
KS LQ ++ IP L L Y LS+ GDPL+MAMD ++KGL LQ T +
Sbjct: 244 KSQLQPLIHLLGIIPVHLYC---LLEPHYGLSMRLGDPLRMAMDKVMKGLPLQQTAEGLL 300
Query: 131 QDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPS 190
+D AMSSY+ VLANILP+ETLLWKL++LKSASA+AN+RL AVKAQTL+L SGRDQLLPS
Sbjct: 301 KDVAAMSSYVYVLANILPEETLLWKLKMLKSASAFANSRLHAVKAQTLLLTSGRDQLLPS 360
Query: 191 EEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRRGRIVDYVSDFIPPT 250
E+EG RL RALP C+ RRF GH+LFLEDGVDLVT IKGA +YRRG+ DYV D+IPPT
Sbjct: 361 EDEGKRLRRALPKCEIRRFNDNGHYLFLEDGVDLVTVIKGASFYRRGKCHDYVFDYIPPT 420
Query: 251 TIEVNKVYEEYRWMVDLTSSVMLSTLPDGKIVRGLSGIPSEGPVLLVGNHMLLGLEALPM 310
E+ + E R + TS VMLSTL DGKIV+GL+GIPSEGPVL +G HMLLG E +PM
Sbjct: 421 PSEIKNICESNRLFMRATSPVMLSTLEDGKIVKGLAGIPSEGPVLFIGYHMLLGYELVPM 480
Query: 311 VPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRIMGSVPVSAINFYKLVSSKAH 370
V ++ERNIL+R +AHPM+F K+G LP+L ++DT+R MG+VPVS N YKL+SSKAH
Sbjct: 481 VMNLLLERNILMRGMAHPMMFTRKKEGYLPELSSFDTYRTMGAVPVSGTNLYKLLSSKAH 540
Query: 371 VLLYPGGVREAFHRKGEEYKLFWPESSEFVRVAAAFGGKIVPFGVVGEDDLAQVI 425
VLLYPGG+REA HRKGE+YKL WPE SEFVR+AA FG KIVPFGV GEDD +++
Sbjct: 541 VLLYPGGLREACHRKGEQYKLIWPEQSEFVRMAARFGAKIVPFGVAGEDDFGEIV 595
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357508295|ref|XP_003624436.1| Acyltransferase-like protein [Medicago truncatula] gi|355499451|gb|AES80654.1| Acyltransferase-like protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 271/428 (63%), Positives = 330/428 (77%), Gaps = 8/428 (1%)
Query: 15 FTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFR 74
FT L+KL+ERT+RSE RS NRP+YLVGESLG CLALAVAARN D+DLVLIL+NPATSF
Sbjct: 162 FTDLVKLVERTVRSEYERSPNRPIYLVGESLGGCLALAVAARNRDIDLVLILSNPATSFS 221
Query: 75 KSLLQTIMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFV 134
+S LQ + P+ E + ++ L +LSL G PL++ +D+ VKGL LQ+T +E DF
Sbjct: 222 RSQLQFVTPL-LETLPDSLSPALPNILSLTAGGPLRLVLDNFVKGLPLQNTARELIGDFT 280
Query: 135 AMSSYLPVLANILPKETLLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEG 194
SS LPVLA+ILPKETLLWKL++ KSAS YAN+RL A+KAQTLIL SG DQLLPS++EG
Sbjct: 281 TFSSSLPVLADILPKETLLWKLKMSKSASEYANSRLYAIKAQTLILSSGNDQLLPSQQEG 340
Query: 195 DRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRRGRIVDYVSDFIPPTTIEV 254
+RL + LPNC+ R+F GHFL LE +DLVT +KGA YYRRG+ DYVSDFIPPT E
Sbjct: 341 ERLHKLLPNCELRKFDDSGHFLLLEGSIDLVTILKGASYYRRGKYHDYVSDFIPPTPYEA 400
Query: 255 NKVYEEYRWMVDLTSSVMLSTLPDGKIVRGLSGIPSEGPVLLVGNHMLLGLEALPMVPTF 314
+V E R + +TS+VMLSTL DG IV+GL+GIPSEGPVL VG HMLLGLE +P+V
Sbjct: 401 KEVIESNRLINAVTSAVMLSTLEDGTIVKGLAGIPSEGPVLFVGYHMLLGLELVPLVSRI 460
Query: 315 VIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRIMGSVPVSAINFYKLVSSKAHVLLY 374
ERNILVR IAHPM+F K+G LP++ ++DTFRIMG+VPV+ N +KL+SSK+HVLLY
Sbjct: 461 YNERNILVRGIAHPMMFKRQKNGSLPEISSFDTFRIMGAVPVAPTNLFKLLSSKSHVLLY 520
Query: 375 PGGVREAFHRKGEEYKLFWPESSEFVRVAAAFGGKIVPFGVVGEDDLAQV-------IKL 427
PGG+REA HRKGEEYKLFWPE SEF+R+AA FG KIVPFG VGEDDL QV +K+
Sbjct: 521 PGGMREALHRKGEEYKLFWPEQSEFIRMAARFGAKIVPFGAVGEDDLGQVVIDYDDLVKI 580
Query: 428 EYFHFSLQ 435
YF ++
Sbjct: 581 PYFKSEIE 588
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255543629|ref|XP_002512877.1| catalytic, putative [Ricinus communis] gi|223547888|gb|EEF49380.1| catalytic, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 540 bits (1390), Expect = e-151, Method: Compositional matrix adjust.
Identities = 274/411 (66%), Positives = 326/411 (79%), Gaps = 1/411 (0%)
Query: 15 FTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFR 74
F GL+KLIE T+RSEN RS NRP+YLVGESLGACLALA+AARNPD+DL L+LANP TSF
Sbjct: 184 FIGLVKLIEETVRSENSRSPNRPIYLVGESLGACLALAIAARNPDVDLALLLANPGTSFN 243
Query: 75 KSLLQTIMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFV 134
KS L++++P+ +++ Q+ L L YLL+L+TGDPLK+ M ++ K + LQ TI S D
Sbjct: 244 KSQLESLIPL-LDIIPDQLLLGLPYLLNLMTGDPLKVVMANVTKPVPLQQTIGGLSHDVT 302
Query: 135 AMSSYLPVLANILPKETLLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEG 194
+SSYL VL ++LP+ETLLWKL+LLKSASAYAN+RL AVKAQTLILCSG+DQLLPS+EEG
Sbjct: 303 ILSSYLSVLGDVLPRETLLWKLQLLKSASAYANSRLHAVKAQTLILCSGKDQLLPSQEEG 362
Query: 195 DRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRRGRIVDYVSDFIPPTTIEV 254
RL ALPN Q R F HFLFLE+ VDLVT IKG +YRRG DY+SD+I P+ E
Sbjct: 363 QRLHNALPNSQNRWFQDSSHFLFLENEVDLVTIIKGTSFYRRGARHDYISDYIQPSPPEF 422
Query: 255 NKVYEEYRWMVDLTSSVMLSTLPDGKIVRGLSGIPSEGPVLLVGNHMLLGLEALPMVPTF 314
++Y+ R++V TS VMLSTL DGKIVRGL+G+PSEGPVL VG HMLLG E PMV F
Sbjct: 423 KRIYDSNRFIVHATSPVMLSTLEDGKIVRGLAGVPSEGPVLYVGYHMLLGFELTPMVTQF 482
Query: 315 VIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRIMGSVPVSAINFYKLVSSKAHVLLY 374
++ERNIL+R IAHP +F K+G LP + +DTFRIMG+VPVS FYKL+SSKAHVLLY
Sbjct: 483 LLERNILLRGIAHPSMFRRLKEGLLPSMSEFDTFRIMGAVPVSGSIFYKLLSSKAHVLLY 542
Query: 375 PGGVREAFHRKGEEYKLFWPESSEFVRVAAAFGGKIVPFGVVGEDDLAQVI 425
PGGVREA HRKGEEYKLFWPE SEFVR+AA FG KIVPFGVVGEDD +V
Sbjct: 543 PGGVREACHRKGEEYKLFWPEQSEFVRMAARFGAKIVPFGVVGEDDFFEVF 593
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449464236|ref|XP_004149835.1| PREDICTED: acyltransferase-like protein At3g26840, chloroplastic-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust.
Identities = 256/411 (62%), Positives = 328/411 (79%), Gaps = 3/411 (0%)
Query: 15 FTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFR 74
FT LLKL+E+T++ E+ RS +P+YL GES GACLAL+VAARNP +D++LIL+NPATSF
Sbjct: 186 FTELLKLVEKTVKDEHRRSPKKPIYLAGESFGACLALSVAARNPHIDIILILSNPATSFS 245
Query: 75 KSLLQTIMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFV 134
KS LQ ++ + E M + ++L Y+L+LL GD ++++ + G LQ + E SQD
Sbjct: 246 KSPLQPVVSL-LEFMPESLQVSLPYILNLLKGDASRLSLAGV--GDILQRIVSELSQDLG 302
Query: 135 AMSSYLPVLANILPKETLLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEG 194
A+SS+L VLA+ILP ETL+WKL +LKSASA +N+RL A+KAQTLILCSGRDQLLPS EEG
Sbjct: 303 AVSSHLSVLADILPVETLIWKLNMLKSASADSNSRLHAIKAQTLILCSGRDQLLPSMEEG 362
Query: 195 DRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRRGRIVDYVSDFIPPTTIEV 254
+RL + LP C+ RRF GHFLFLEDG+DL TTI+GA +YRR + +DYVSDFIPP+ EV
Sbjct: 363 ERLRQFLPKCEIRRFSNNGHFLFLEDGLDLATTIRGASFYRRSQYLDYVSDFIPPSPAEV 422
Query: 255 NKVYEEYRWMVDLTSSVMLSTLPDGKIVRGLSGIPSEGPVLLVGNHMLLGLEALPMVPTF 314
K++E+Y + TS V+LSTL DGKIVRGL+GIP EGPVL VG HMLLGLE PMV F
Sbjct: 423 RKIFEDYSLVNFATSPVLLSTLEDGKIVRGLAGIPEEGPVLFVGYHMLLGLELAPMVGQF 482
Query: 315 VIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRIMGSVPVSAINFYKLVSSKAHVLLY 374
E+NI++R +AHP++F K+G LPDL +YD+FR+MG+VPV+A NFYKL+S+K+HVLLY
Sbjct: 483 FKEKNIILRGMAHPLMFIKIKEGRLPDLASYDSFRMMGAVPVTAKNFYKLLSTKSHVLLY 542
Query: 375 PGGVREAFHRKGEEYKLFWPESSEFVRVAAAFGGKIVPFGVVGEDDLAQVI 425
PGG+REA HRKGE YKLFWPE SEF+R+AA FG KIVPFGVVGEDD+++++
Sbjct: 543 PGGMREALHRKGEAYKLFWPEQSEFIRMAARFGAKIVPFGVVGEDDISEMV 593
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357508285|ref|XP_003624431.1| Acyltransferase-like protein [Medicago truncatula] gi|355499446|gb|AES80649.1| Acyltransferase-like protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 262/430 (60%), Positives = 324/430 (75%), Gaps = 10/430 (2%)
Query: 15 FTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFR 74
FT L+KL+E+T+RSE RS NRP+YL+GESLG CLALAVAARN D+DLVLILANPATSF
Sbjct: 134 FTDLVKLVEKTVRSEYKRSPNRPIYLIGESLGGCLALAVAARNRDIDLVLILANPATSFS 193
Query: 75 KSLLQTIMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFV 134
+SL+Q + P+ + + + L +LSL GDPL+M +D+ VKGL L + E +DF
Sbjct: 194 RSLMQLLSPL-LDALPDSFSPALPNILSLTAGDPLRMVLDNAVKGLPLLNAAGEPIEDFT 252
Query: 135 AMSSYLPVLANILPKETLLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEG 194
SS LPVLA+ILPKETLLWKL++LKSASAYAN+ L A+KAQTLILCSG D+LLPS++EG
Sbjct: 253 TFSSSLPVLADILPKETLLWKLKMLKSASAYANSGLHAIKAQTLILCSGNDRLLPSQQEG 312
Query: 195 DRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRRGRIVDYVSDFIPPTTIEV 254
+RL + LP+C+ R+F GHFLFLE +DL+T IKG YYRRG+ DY SDFIPPT E
Sbjct: 313 ERLRQLLPSCELRKFDNSGHFLFLEGSIDLLTVIKGTSYYRRGKYHDYASDFIPPTPDEA 372
Query: 255 NKVYEEYRWMV--DLTSSVMLSTLPDGKIVRGLSGIPSEGPVLLVGNHMLLGLEALPMVP 312
K+ E Y + + +T SVMLSTL DGKIV+GL+GIPSEGPVLLVGNHMLL L+ P +
Sbjct: 373 KKIIESYSYSLFNIVTGSVMLSTLEDGKIVKGLAGIPSEGPVLLVGNHMLLALDVAPFII 432
Query: 313 TFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRIMGSVPVSAINFYKLVSSKAHVL 372
F ER+ILVR AHPM F K G LP++ ++D+ R+MG+ PV N + L++SK+HVL
Sbjct: 433 RFFTERDILVRGTAHPMFFKRQKSGRLPEVSSFDSLRVMGAYPVGVSNLFNLLASKSHVL 492
Query: 373 LYPGGVREAFHRKGEEYKLFWPESSEFVRVAAAFGGKIVPFGVVGEDDLAQV-------I 425
LYPGG+RE FHRKGEEYKLFWPE SEFVR+AA FG KIVPFG VGEDDL QV +
Sbjct: 493 LYPGGLREGFHRKGEEYKLFWPEQSEFVRMAARFGAKIVPFGSVGEDDLGQVVIDYDDLV 552
Query: 426 KLEYFHFSLQ 435
K+ YF ++
Sbjct: 553 KIPYFRSEIE 562
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224060309|ref|XP_002300135.1| predicted protein [Populus trichocarpa] gi|222847393|gb|EEE84940.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 265/423 (62%), Positives = 318/423 (75%), Gaps = 23/423 (5%)
Query: 15 FTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFR 74
F GL+KLIERT+RSE+ NRP+YL GESLGACLALAVAARNPD+DLVL+LANPATSF
Sbjct: 106 FLGLVKLIERTVRSESYCFPNRPIYLAGESLGACLALAVAARNPDVDLVLVLANPATSFE 165
Query: 75 KSLLQTIMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFV 134
KS LQ ++P+ E++ Q LT+ Y+ MAMD+ VKG L+ TI SQD V
Sbjct: 166 KSQLQPLIPL-LEVLPFQHQLTIPYM----------MAMDNAVKGFPLEQTIGGLSQDLV 214
Query: 135 AMSSYLPVLANILPKETLLWKLELLKSASAYANARLDAVKAQTLILC-----------SG 183
AMSSYL LANILP+ETLLWKL++LK+ASAYAN+RL AVK+QTL+L SG
Sbjct: 215 AMSSYLNALANILPRETLLWKLQMLKTASAYANSRLHAVKSQTLVLSRSSLICCLPFLSG 274
Query: 184 RDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRRGRIVDYV 243
RDQLLPSEEEG RL ALP C+ R+F GHFLFLE VDL IKGA YRRG+ +DY+
Sbjct: 275 RDQLLPSEEEGQRLYVALPKCEIRKFNDSGHFLFLEHDVDLANIIKGASCYRRGKYLDYI 334
Query: 244 SDFIPPTTIEVNKVYEEYRWMVDLTSSVMLSTLPDGKIVRGLSGIPSEGPVLLVGNHMLL 303
SD+IPPT +E K+Y+ R V TS VMLS DGKIVRGL+G+PSEGPVL VG HML+
Sbjct: 335 SDYIPPTPLEFKKLYDSNRLFVLATSPVMLSYFQDGKIVRGLAGVPSEGPVLYVGYHMLM 394
Query: 304 GLEALPMVPTFVIERNILVRAIAHPMVFFN-AKDGGLPDLVTYDTFRIMGSVPVSAINFY 362
G E +P++ F++ERNIL+R I HPM++ K+G +P L +D R MG+VPVS NFY
Sbjct: 395 GFEVIPLISNFLLERNILIRGITHPMLYVKLKKEGMMPPLQQFDVVRTMGAVPVSGSNFY 454
Query: 363 KLVSSKAHVLLYPGGVREAFHRKGEEYKLFWPESSEFVRVAAAFGGKIVPFGVVGEDDLA 422
KL+SSKAH LLYPGG+REA+HRKGEEYKLFWPE SEFVR+A+ FG KIVPFGVVGEDD
Sbjct: 455 KLMSSKAHALLYPGGMREAYHRKGEEYKLFWPEKSEFVRMASRFGAKIVPFGVVGEDDFG 514
Query: 423 QVI 425
+V+
Sbjct: 515 EVV 517
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356571611|ref|XP_003553970.1| PREDICTED: acyltransferase-like protein At3g26840, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 267/430 (62%), Positives = 330/430 (76%), Gaps = 10/430 (2%)
Query: 15 FTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFR 74
FT LLK++ERT+RSE+ RS NRP+YLVGESLGACLALAVAA NPD+DLVLILANPATSFR
Sbjct: 155 FTDLLKIVERTVRSEHQRSPNRPIYLVGESLGACLALAVAALNPDIDLVLILANPATSFR 214
Query: 75 KSLLQTIMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFV 134
+S LQ + P+ E + ++ L +L G+ L+M +D++V+GL LQ+T E +DF
Sbjct: 215 RSSLQLLTPL-LEALPNPLSPGLPNILRSTEGESLRMLLDNVVQGLPLQNTAGELVKDFT 273
Query: 135 AMSSYLPVLANILPKETLLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEG 194
A S LPVLA+ILPKETL+WKL++LKSASAYA++RL A+KAQTLILCSG DQLLPS++EG
Sbjct: 274 AFSLSLPVLADILPKETLVWKLKMLKSASAYAHSRLYAIKAQTLILCSGNDQLLPSQQEG 333
Query: 195 DRLCRALPN--CQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRRGRIVDYVSDFIPPTTI 252
+RL + LP CQ R+F GHFLFLED +DLVT IKG YYRRG+ DY SDFIPPT
Sbjct: 334 ERLLKLLPKSKCQLRKFDDSGHFLFLEDSIDLVTIIKGTSYYRRGKYHDYASDFIPPTLD 393
Query: 253 EVNKVYEEYRWMVDLTSSVMLSTLPDGKIVRGLSGIPSEGPVLLVGNHMLLGLEALPMVP 312
E + E + S+VMLSTL DG +V+GL+GIPSEGPVL VG HMLLGLE +P+V
Sbjct: 394 EAKNIIESNSLFNLIASAVMLSTLEDGTLVKGLAGIPSEGPVLFVGYHMLLGLEKIPLVS 453
Query: 313 TFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRIMGSVPVSAINFYKLVSSKAHVL 372
+ERNIL+R +AHPM+F +K+G LPDL ++D FR+MG+VPV+ N +KL SSK+HVL
Sbjct: 454 RIFLERNILLRGVAHPMMFMRSKNGRLPDLSSFDKFRVMGAVPVAPTNLFKLFSSKSHVL 513
Query: 373 LYPGGVREAFHRKGEEYKLFWPESSEFVRVAAAFGGKIVPFGVVGEDDLAQV-------I 425
LYPGG+REA HRKGEEYKLFWPE SEFVR+AA FG KIVPFG VGEDDL +V +
Sbjct: 514 LYPGGMREALHRKGEEYKLFWPEQSEFVRMAARFGAKIVPFGAVGEDDLGEVVFDYDDLV 573
Query: 426 KLEYFHFSLQ 435
K+ YF ++
Sbjct: 574 KIPYFRSEIE 583
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 435 | ||||||
| TAIR|locus:2163091 | 684 | AT5G41120 "AT5G41120" [Arabido | 0.924 | 0.587 | 0.532 | 2.9e-103 | |
| TAIR|locus:2088404 | 701 | PES2 "AT3G26840" [Arabidopsis | 0.935 | 0.580 | 0.502 | 1.3e-98 | |
| TAIR|locus:2199481 | 704 | PES1 "AT1G54570" [Arabidopsis | 0.942 | 0.582 | 0.468 | 1.5e-92 | |
| TAIR|locus:2088474 | 634 | AT3G26820 "AT3G26820" [Arabido | 0.616 | 0.422 | 0.419 | 2.4e-85 | |
| UNIPROTKB|O53962 | 287 | Rv1920 "PROBABLE MEMBRANE PROT | 0.296 | 0.449 | 0.355 | 1.2e-10 |
| TAIR|locus:2163091 AT5G41120 "AT5G41120" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1023 (365.2 bits), Expect = 2.9e-103, P = 2.9e-103
Identities = 219/411 (53%), Positives = 271/411 (65%)
Query: 20 KLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQ 79
KLIE+T+RSE+ R NRP+Y+VGES+GA LAL VAA NPD+DLVLILANP T F +LQ
Sbjct: 156 KLIEKTVRSEHYRFPNRPIYIVGESIGASLALDVAASNPDIDLVLILANPVTRFTNLMLQ 215
Query: 80 TIMPIPAELMSGQMXXXXXXXXXXXXG-DPLKMAMDSIVKGLFLQSTIQERSQDFVAMSS 138
++ + L G + + D+ G L DF A SS
Sbjct: 216 PVLALLEILPDGVPGLITENFGFYQEMFETMLNENDAAQMGRGLLG-------DFFATSS 268
Query: 139 YLPVLANIXXXXXXXXXXXXXXSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLC 198
LP L I SASA AN+++D V AQTLIL SGRDQ L ++E+ +RL
Sbjct: 269 NLPTLIRIFPKDTLLWKLQLLKSASASANSQMDTVNAQTLILLSGRDQWLMNKEDIERLR 328
Query: 199 RALPNCQTRRFXXXXHFLFLEDGVDLVTTIKGAGYYRRGRIVDYVSDFIPPTTIEVNKVY 258
ALP C+ R FLFLEDGVDLV+ IK A YYRRG+ +DY+SD+I PT E +
Sbjct: 329 GALPRCEVRELENNGQFLFLEDGVDLVSIIKRAYYYRRGKSLDYISDYILPTPFEFKEYE 388
Query: 259 EEYRWMVDLTSSVMLSTLPDGKIVRGLSGIPSEGPVLLVGNHMLLGLEALPMVPTFVIER 318
E R + +TS V LSTL +G +VR L+GIPSEGPVL VGNHMLLG+E + F+ ER
Sbjct: 389 ESQRLLTAVTSPVFLSTLKNGAVVRSLAGIPSEGPVLYVGNHMLLGMELHAIALHFLKER 448
Query: 319 NILVRAIAHPMVFFNAKDGGLPDLVTYDTFRIMGSVPVSAINFYKLVSSKAHVLLYPGGV 378
NIL+R +AHP++F LPD+ YD FRI+G+VPVS +NFYKL+ SKAHV LYPGGV
Sbjct: 449 NILLRGLAHPLMFTKKTGSKLPDMQLYDLFRIIGAVPVSGMNFYKLLRSKAHVALYPGGV 508
Query: 379 REAFHRKGEEYKLFWPESSEFVRVAAAFGGKIVPFGVVGEDDLAQVIKLEY 429
REA HRKGEEYKLFWPE SEFVR+A+ FG KI+PFGVVGEDDL +++ L+Y
Sbjct: 509 REALHRKGEEYKLFWPEHSEFVRIASKFGAKIIPFGVVGEDDLCEMV-LDY 558
|
|
| TAIR|locus:2088404 PES2 "AT3G26840" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 979 (349.7 bits), Expect = 1.3e-98, P = 1.3e-98
Identities = 207/412 (50%), Positives = 265/412 (64%)
Query: 18 LLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSL 77
L+KLIE T++SEN R NRP+YLVGES+GACLAL VAARNP++DL LIL NPAT +
Sbjct: 165 LVKLIEETVKSENFRLPNRPIYLVGESIGACLALDVAARNPNIDLSLILVNPATHVNNFM 224
Query: 78 LQTIMPIPAELMSG-QMXXXXXXXXXXXXGDPLKMAMDSIVKGLFLQ---STIQERSQDF 133
+Q + + L G GDPL +D++ +Q +D
Sbjct: 225 VQPLSGMLNVLPDGLPTLLEDIFDFGFKQGDPLTGMLDALSNEFSVQRMGGVGGGMLRDV 284
Query: 134 VAMSSYLPVLANIXXXXXXXXXXXXXXSASAYANARLDAVKAQTLILCSGRDQLLPSEEE 193
+A+S+ LP L+ + A A N+ + +V+A+TLIL SGRD L EE+
Sbjct: 285 LAVSANLPTLSRMFPKDTLLWKLEMLKYAIASVNSHIYSVRAETLILLSGRDHWLLKEED 344
Query: 194 GDRLCRALPNCQTRRFXXXXHFLFLEDGVDLVTTIKGAGYYRRGRIVDYVSDFIPPTTIE 253
DR R LP C R+ F LEDGVDL T IK +YRRG+ D+++D+I PTT E
Sbjct: 345 IDRYSRTLPKCIVRKLDDNGQFPLLEDGVDLATIIKCTCFYRRGKSHDHITDYIMPTTFE 404
Query: 254 VNKVYEEYRWMVDLTSSVMLSTLPDGKIVRGLSGIPSEGPVLLVGNHMLLGLEALPMVPT 313
+ + +++R ++D TS VMLSTL DG +VR L G+PSEGPVL VG HM+LG E PMV
Sbjct: 405 LKQQVDDHRLLMDGTSPVMLSTLEDGTVVRSLEGLPSEGPVLYVGYHMILGFELAPMVIQ 464
Query: 314 FVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRIMGSVPVSAINFYKLVSSKAHVLL 373
+ ERNI +R +AHPM+F N +D L D +D ++IMG VPVS N YKL+ KAHVLL
Sbjct: 465 LMTERNIHLRGLAHPMLFKNLQDS-LVDTKMFDKYKIMGGVPVSHFNIYKLLREKAHVLL 523
Query: 374 YPGGVREAFHRKGEEYKLFWPESSEFVRVAAAFGGKIVPFGVVGEDDLAQVI 425
YPGGVREA HRKGEEYKLFWPE SEFVRVA+ FG KIVPFGVVGEDD+ +++
Sbjct: 524 YPGGVREALHRKGEEYKLFWPERSEFVRVASKFGAKIVPFGVVGEDDICEIV 575
|
|
| TAIR|locus:2199481 PES1 "AT1G54570" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 922 (329.6 bits), Expect = 1.5e-92, P = 1.5e-92
Identities = 196/418 (46%), Positives = 258/418 (61%)
Query: 15 FTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFR 74
F GLLK++E +R E N+P+YLVG+S G CLALAVAARN +DLVLIL NPATSF
Sbjct: 167 FEGLLKVVEDVLRQEQATRPNKPIYLVGDSFGGCLALAVAARNRSLDLVLILVNPATSFD 226
Query: 75 KSLLQTIMPIPAELMSGQMXXXXXXXXXXXXGDPLKMAMDSIVKGLFLQSTIQERSQDFV 134
+S LQ ++PI E++ ++ GDP+KMA I L I++ Q
Sbjct: 227 RSPLQPLLPI-LEMVPEELHFTVPYALSFIMGDPIKMATLGIDNQLPTGVKIEKLRQRLT 285
Query: 135 -AMSSYLPVLANIXXXXXXXXXXXXXXSASAYANARLDAVKAQTLILCSGRDQLLPSEEE 193
M L L I S AYAN+R+ AV+A+ L+L SG+D +LPS+EE
Sbjct: 286 KTMLPLLSELGGIIPRETLLWKLKLLRSGCAYANSRIHAVQAEVLVLASGKDMMLPSQEE 345
Query: 194 GDRLCRALPNCQTRRFXXXXHFLFLEDGVDLVTTIKGAGYYRRGRIVDYVSDFIPPTTIE 253
RL L NC R F H L LED + L+T IKG G YRR D VSDF+PP+ E
Sbjct: 346 AKRLHGLLKNCSVRCFKDNGHTLLLEDSISLLTVIKGTGKYRRSWRYDLVSDFLPPSKGE 405
Query: 254 VNKVYEEYR-WMVDLTSSVMLSTLPDGKIVRGLSGIPSEGPVLLVGNHMLLGLEALPMVP 312
+ +E ++ + SV ST+ DGKIV+GL+G+P +GPVLLVG HML+GLE PM
Sbjct: 406 LAYALDEVLGFLRNAVGSVFFSTMEDGKIVKGLAGVPDKGPVLLVGYHMLMGLELGPMSE 465
Query: 313 TFVIERNILVRAIAHPMVFFNAKDGGLPDLVTY-DTFRIMGSVPVSAINFYKLVSSKAHV 371
F+ E+NIL R +AHP+++ D Y D ++ G+ PV+A N +KL+ SK+HV
Sbjct: 466 AFIKEKNILFRGMAHPVLY---SDNDPAKAFDYGDWIKVFGAYPVTATNLFKLLDSKSHV 522
Query: 372 LLYPGGVREAFHRKGEEYKLFWPESSEFVRVAAAFGGKIVPFGVVGEDDLAQVIKLEY 429
LL+PGG REA H +GE+YKL WPE EFVR+AA FG IVPFG VGEDD+A+++ L+Y
Sbjct: 523 LLFPGGAREALHNRGEQYKLIWPEQQEFVRMAARFGATIVPFGTVGEDDIAELV-LDY 579
|
|
| TAIR|locus:2088474 AT3G26820 "AT3G26820" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 484 (175.4 bits), Expect = 2.4e-85, Sum P(2) = 2.4e-85
Identities = 114/272 (41%), Positives = 158/272 (58%)
Query: 15 FTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFR 74
F L+KLIERT++SEN R NRP+YLVGES+GACLAL VAARNP++DL LIL NPAT
Sbjct: 129 FKDLVKLIERTVKSENYRFPNRPIYLVGESIGACLALDVAARNPNVDLALILVNPATHVN 188
Query: 75 KSLLQTIMPIPAELMSGQMXXXXXXXXXXXXGDPLKMAMDSIVKGLFLQ---STIQERSQ 131
+ + ++ + L G + G PL ++++ +Q +
Sbjct: 189 NFMSKPLLGMLNVLPDG-IPTLWEDVFGFKQGAPLTGILEAMSNEFSVQRMGGVGGGMLR 247
Query: 132 DFVAMSSYLPVLANIXXXXXXXXXXXXXXSASAYANARLDAVKAQTLILCSGRDQLLPSE 191
D A+S+ LP L+ + SA A N+ + +VKA+TLIL SGRDQ L +E
Sbjct: 248 DLFAVSANLPTLSRMFSKDTLLWKLEMLKSAIASVNSHIYSVKAETLILPSGRDQWLLNE 307
Query: 192 EEGDRLCRALPNCQTRRFXXXXHFLFLEDGVDLVTTIKGAGYYRRGRIVDYVSDFIPPTT 251
E+ R R LPNC R+ F LED +DL T IK +YRRG+ DYVSD+I PT
Sbjct: 308 EDIVRYSRTLPNCIVRKLDDNGQFPLLEDSLDLATIIKLTCFYRRGKSHDYVSDYIKPTP 367
Query: 252 IEVNKVYEEYRWMVDLTSSVMLSTLPDGKIVR 283
E+ ++ +E+R ++D S VMLSTL DG +++
Sbjct: 368 FELQQLLDEHRLLMDAISPVMLSTLEDGLLLK 399
|
|
| UNIPROTKB|O53962 Rv1920 "PROBABLE MEMBRANE PROTEIN" [Mycobacterium tuberculosis H37Rv (taxid:83332)] | Back alignment and assigned GO terms |
|---|
Score = 172 (65.6 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 49/138 (35%), Positives = 71/138 (51%)
Query: 282 VRGLSGIPSEGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPD 341
V G+ +P+E LLVGNH LGL P++ + ER +VR++ F K G D
Sbjct: 49 VYGIENVPTER-ALLVGNHNTLGLVDAPLLAAELWERGRIVRSLGDHAHF---KIPGWRD 104
Query: 342 LVTYDTFRIMGSVPVSAINFYKLVSSKAHVLLYPGGVREAFHRKGEEYKLFWPESSEFVR 401
+T T + G+ +++ +L+ V+++PGG RE RK E YKL W F R
Sbjct: 105 ALTR-TGVVEGTREITS----ELMRRGELVMVFPGGAREVNKRKNERYKLVWKNRLGFAR 159
Query: 402 VAAAFGGKIVPFGVVGED 419
+A G IVPF VG +
Sbjct: 160 LAIQHGYPIVPFASVGAE 177
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.140 0.412 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 435 405 0.0010 117 3 11 22 0.48 33
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 5
No. of states in DFA: 602 (64 KB)
Total size of DFA: 228 KB (2126 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 30.91u 0.07s 30.98t Elapsed: 00:00:01
Total cpu time: 30.91u 0.07s 30.98t Elapsed: 00:00:01
Start: Mon May 20 18:26:14 2013 End: Mon May 20 18:26:15 2013
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|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 435 | |||
| cd07987 | 212 | cd07987, LPLAT_MGAT-like, Lysophospholipid Acyltra | 8e-35 | |
| COG0596 | 282 | COG0596, MhpC, Predicted hydrolases or acyltransfe | 1e-08 | |
| COG2267 | 298 | COG2267, PldB, Lysophospholipase [Lipid metabolism | 4e-06 | |
| pfam12697 | 187 | pfam12697, Abhydrolase_6, Alpha/beta hydrolase fam | 2e-05 | |
| pfam00561 | 226 | pfam00561, Abhydrolase_1, alpha/beta hydrolase fol | 3e-05 | |
| pfam12695 | 145 | pfam12695, Abhydrolase_5, Alpha/beta hydrolase fam | 4e-04 | |
| TIGR03343 | 282 | TIGR03343, biphenyl_bphD, 2-hydroxy-6-oxo-6-phenyl | 6e-04 | |
| PLN02783 | 315 | PLN02783, PLN02783, diacylglycerol O-acyltransfera | 0.001 | |
| TIGR03611 | 248 | TIGR03611, RutD, pyrimidine utilization protein D | 0.002 | |
| PRK08633 | 1146 | PRK08633, PRK08633, 2-acyl-glycerophospho-ethanola | 0.003 |
| >gnl|CDD|153249 cd07987, LPLAT_MGAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like | Back alignment and domain information |
|---|
Score = 128 bits (323), Expect = 8e-35
Identities = 54/153 (35%), Positives = 73/153 (47%), Gaps = 9/153 (5%)
Query: 279 GKIVRGLSGIPSEGPVLLVGNHMLLGLEALPMVPTFV-IERNILVRAIAHPMVFFNAKDG 337
VRGL IP EGP LLV H L ++ + F+ + L RA+A +F
Sbjct: 7 VYEVRGLENIPDEGPALLVHPHGGLPIDGALLAAAFLLLFPGRLPRALADHFLF------ 60
Query: 338 GLPDLVTYDTFRIMGSVPVSAINFYKLVSSKAHVLLYPGGVREAFHRKGEEYKLFWPESS 397
P D R +G+VP S N +L+ VL++PGG REA K EEY L W +
Sbjct: 61 --PLPGLRDLLRRLGAVPGSRENCVRLLREGELVLIFPGGAREALKSKREEYYLLWKKRK 118
Query: 398 EFVRVAAAFGGKIVPFGVVGEDDLAQVIKLEYF 430
F R+A G IVP GE++L +V+
Sbjct: 119 GFARLALRAGAPIVPVFTFGEEELFRVLGDPDG 151
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this suubgroup are such LPLATs as 2-acylglycerol O-acyltransferase (MGAT), and similar proteins. Length = 212 |
| >gnl|CDD|223669 COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 55.8 bits (133), Expect = 1e-08
Identities = 47/195 (24%), Positives = 65/195 (33%), Gaps = 7/195 (3%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTL 95
V LVG S+G +ALA+A R+PD L+L PA P A ++ L
Sbjct: 88 EKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADL 147
Query: 96 TLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWK 155
LL L + + + ++ A A L
Sbjct: 148 ----LLGLDAAAFAALLAALGLLAALAAAARAGLAEALRAPLLGAAAAAFARAARADLAA 203
Query: 156 LELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPN-CQTRRFGGGGH 214
L A L + TLI+ D ++P E RL ALPN + G GH
Sbjct: 204 ALLALLDRDLR-AALARITVPTLIIHGEDDPVVP-AELARRLAAALPNDARLVVIPGAGH 261
Query: 215 FLFLEDGVDLVTTIK 229
F LE +
Sbjct: 262 FPHLEAPEAFAAALL 276
|
Length = 282 |
| >gnl|CDD|225176 COG2267, PldB, Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 47.8 bits (114), Expect = 4e-06
Identities = 38/209 (18%), Positives = 67/209 (32%), Gaps = 24/209 (11%)
Query: 14 HFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPD-MDLVLILANPATS 72
+ L TI + PV+L+G S+G +AL AR P +D + +L++PA
Sbjct: 88 DYVDDLDAFVETIAEPDPG---LPVFLLGHSMGGLIALLYLARYPPRIDGL-VLSSPA-- 141
Query: 73 FRKSLLQTIMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQD 132
+ + + + + + + S R
Sbjct: 142 LGLGGAILRLILARLALKLLGRIRPKLPVDSNLLEGVLTDDLS-------------RDPA 188
Query: 133 FVAMSSYLPVLANILPKETLLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEE 192
VA Y + W L + A A+ L+L G D+++ + E
Sbjct: 189 EVAA--YEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDRVVDNVE 246
Query: 193 EGDRLCRAL--PNCQTRRFGGGGHFLFLE 219
R P+ + + G H L E
Sbjct: 247 GLARFFERAGSPDKELKVIPGAYHELLNE 275
|
Length = 298 |
| >gnl|CDD|221720 pfam12697, Abhydrolase_6, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 45.1 bits (107), Expect = 2e-05
Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Query: 134 VAMSSYLPVLANILPKETLLWKLELLKSASAYANAR--LDAVKAQTLILCSGRDQLLPSE 191
V +S L L +L + L LL++A A+ R L + L++ D L+P
Sbjct: 94 VLISPPLRDLEELLAADAAAL-LALLRAALLDADLREALARLTVPVLVIHGEDDPLVP-P 151
Query: 192 EEGDRLCRALPNCQTRRFGGGGHFLFLED 220
E RL ALP + G GH LE
Sbjct: 152 EAARRLAEALPGAELVVLPGAGHLPHLEH 180
|
This family contains alpha/beta hydrolase enzymes of diverse specificity. Length = 187 |
| >gnl|CDD|201306 pfam00561, Abhydrolase_1, alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Score = 44.8 bits (106), Expect = 3e-05
Identities = 42/187 (22%), Positives = 60/187 (32%), Gaps = 14/187 (7%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLV--LILANPATSFRKSLLQTIMPIPAELMSGQM 93
V LVG S+G +ALA AA+ P D V L+L L + G +
Sbjct: 42 DKVNLVGHSMGGLIALAYAAKYP--DRVKALVLVGTVHPA---GLSS-----PLTPRGNL 91
Query: 94 TLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLL 153
L D ++ + +K S L L + LL
Sbjct: 92 LGLLLDNFFNRLYDSVEALLGRAIKQFQALGRPFVSDFLKQFELSSLIRFGETLALDGLL 151
Query: 154 WKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGG 213
+ A L + TLI+ D L+P + ++L PN Q G
Sbjct: 152 GYALGYDLVWDRS-AALKDIDVPTLIIWGDDDPLVP-PDASEKLAALFPNAQLVVIDDAG 209
Query: 214 HFLFLED 220
H LE
Sbjct: 210 HLAQLEK 216
|
This catalytic domain is found in a very wide range of enzymes. Length = 226 |
| >gnl|CDD|221718 pfam12695, Abhydrolase_5, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 4e-04
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQ 92
+ LVG SLG +AL +AAR+P + ++LA L + +P ++ G
Sbjct: 58 ERIVLVGHSLGGGVALLLAARDPRVKAAVVLAAGDPPDALDDLAKL-TVPVLIIHGT 113
|
This family contains a diverse range of alpha/beta hydrolase enzymes. Length = 145 |
| >gnl|CDD|132386 TIGR03343, biphenyl_bphD, 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | Back alignment and domain information |
|---|
Score = 41.1 bits (96), Expect = 6e-04
Identities = 48/187 (25%), Positives = 75/187 (40%), Gaps = 37/187 (19%)
Query: 39 YLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAE-------LMSG 91
+LVG S+G AL A PD LIL P SL P+P E L +
Sbjct: 104 HLVGNSMGGATALNFALEYPDRIGKLILMGPG-GLGPSLFA---PMPMEGIKLLFKLYAE 159
Query: 92 QMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERS---QDFVAMSSYLPVLANILP 148
TL +L++ D + + +++G + IQ + ++F+ S P+
Sbjct: 160 PSYETLKQMLNVFLFDQ-SLITEELLQGRW--ENIQRQPEHLKNFLISSQKAPLST---- 212
Query: 149 KETLLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRR 208
W + ARL +KA+TL+ GRD + G +L +P+ Q
Sbjct: 213 -----WDV----------TARLGEIKAKTLVTW-GRDDRFVPLDHGLKLLWNMPDAQLHV 256
Query: 209 FGGGGHF 215
F GH+
Sbjct: 257 FSRCGHW 263
|
Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself. Length = 282 |
| >gnl|CDD|178380 PLN02783, PLN02783, diacylglycerol O-acyltransferase | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 0.001
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 351 MGSVPVSAINFYKLVSSKAHVLLYPGGVREAFHRKGEEYKLFWPESSEFVRVAAAFGGKI 410
+G P S NF L+ + ++ PGGV+E + + + FV++A G +
Sbjct: 153 LGLDPASRKNFTSLLKAGYSCIIVPGGVQECLYMEHGSEVAYLKSRKGFVKIAMETGAPL 212
Query: 411 VP---FG 414
VP FG
Sbjct: 213 VPVFCFG 219
|
Length = 315 |
| >gnl|CDD|211851 TIGR03611, RutD, pyrimidine utilization protein D | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 0.002
Identities = 43/195 (22%), Positives = 67/195 (34%), Gaps = 63/195 (32%)
Query: 41 VGESLGACLALAVAARNPDMDLVLIL------ANPAT----SFRKSLL-----------Q 79
VG +LG + L +A P+ L+L +P T R +LL Q
Sbjct: 84 VGHALGGLIGLQLALDYPERLTSLVLINGWSRPDPHTRRCFDVRIALLYHAGPEAYVHAQ 143
Query: 80 TIMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSY 139
+ PA+ +S L D
Sbjct: 144 PLFLYPADWISENAPR--------LAADEAHA---------------------------- 167
Query: 140 LPVLANILPKETLLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCR 199
LA+ K +L ++ L++ +ARLD ++ L++ + D L+P RL
Sbjct: 168 ---LAHFPGKNNVLRRINALEAFDV--SARLDRIRHPVLLIAARDDMLVPYTCS-LRLAA 221
Query: 200 ALPNCQTRRFGGGGH 214
ALPN Q + GGH
Sbjct: 222 ALPNAQLKLLPYGGH 236
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. Length = 248 |
| >gnl|CDD|236315 PRK08633, PRK08633, 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated | Back alignment and domain information |
|---|
Score = 39.5 bits (93), Expect = 0.003
Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 23/82 (28%)
Query: 282 VRGLSGIPSEGPVLLVGNHM-----LLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKD 336
V G IP++G LL+GNH+ L A P FV+ER+I +
Sbjct: 431 VEGRENIPAKGGALLLGNHVSWIDWALLQAASPRPIRFVMERSIYEKWYLKWF------- 483
Query: 337 GGLPDLVTYDTFRIMGSVPVSA 358
F++ G +P+S+
Sbjct: 484 -----------FKLFGVIPISS 494
|
Length = 1146 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 435 | |||
| KOG2848 | 276 | consensus 1-acyl-sn-glycerol-3-phosphate acyltrans | 99.95 | |
| cd07987 | 212 | LPLAT_MGAT-like Lysophospholipid Acyltransferases | 99.95 | |
| PLN02783 | 315 | diacylglycerol O-acyltransferase | 99.94 | |
| PRK15018 | 245 | 1-acyl-sn-glycerol-3-phosphate acyltransferase; Pr | 99.93 | |
| PTZ00261 | 355 | acyltransferase; Provisional | 99.91 | |
| cd07986 | 210 | LPLAT_ACT14924-like Lysophospholipid Acyltransfera | 99.9 | |
| PLN02901 | 214 | 1-acyl-sn-glycerol-3-phosphate acyltransferase | 99.9 | |
| cd07992 | 203 | LPLAT_AAK14816-like Lysophospholipid Acyltransfera | 99.89 | |
| COG0204 | 255 | PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferas | 99.88 | |
| PLN02824 | 294 | hydrolase, alpha/beta fold family protein | 99.88 | |
| cd07988 | 163 | LPLAT_ABO13168-like Lysophospholipid Acyltransfera | 99.88 | |
| PLN02965 | 255 | Probable pheophorbidase | 99.87 | |
| TIGR00530 | 130 | AGP_acyltrn 1-acyl-sn-glycerol-3-phosphate acyltra | 99.87 | |
| PLN03087 | 481 | BODYGUARD 1 domain containing hydrolase; Provision | 99.87 | |
| PRK03592 | 295 | haloalkane dehalogenase; Provisional | 99.86 | |
| PLN02679 | 360 | hydrolase, alpha/beta fold family protein | 99.86 | |
| PF01553 | 132 | Acyltransferase: Acyltransferase; InterPro: IPR002 | 99.86 | |
| KOG4178 | 322 | consensus Soluble epoxide hydrolase [Lipid transpo | 99.85 | |
| PRK03204 | 286 | haloalkane dehalogenase; Provisional | 99.85 | |
| TIGR02240 | 276 | PHA_depoly_arom poly(3-hydroxyalkanoate) depolymer | 99.85 | |
| TIGR03343 | 282 | biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-die | 99.84 | |
| PRK00870 | 302 | haloalkane dehalogenase; Provisional | 99.84 | |
| KOG1454 | 326 | consensus Predicted hydrolase/acyltransferase (alp | 99.84 | |
| PRK08043 | 718 | bifunctional acyl-[acyl carrier protein] synthetas | 99.84 | |
| KOG4409 | 365 | consensus Predicted hydrolase/acyltransferase (alp | 99.84 | |
| PF12697 | 228 | Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3 | 99.83 | |
| PRK10349 | 256 | carboxylesterase BioH; Provisional | 99.83 | |
| cd07991 | 211 | LPLAT_LPCAT1-like Lysophospholipid Acyltransferase | 99.83 | |
| PLN02578 | 354 | hydrolase | 99.83 | |
| TIGR03056 | 278 | bchO_mg_che_rel putative magnesium chelatase acces | 99.82 | |
| PRK07581 | 339 | hypothetical protein; Validated | 99.82 | |
| PRK10673 | 255 | acyl-CoA esterase; Provisional | 99.82 | |
| PLN02385 | 349 | hydrolase; alpha/beta fold family protein | 99.81 | |
| PRK08633 | 1146 | 2-acyl-glycerophospho-ethanolamine acyltransferase | 99.81 | |
| PRK06765 | 389 | homoserine O-acetyltransferase; Provisional | 99.81 | |
| PRK06489 | 360 | hypothetical protein; Provisional | 99.81 | |
| PRK08775 | 343 | homoserine O-acetyltransferase; Provisional | 99.81 | |
| TIGR03611 | 257 | RutD pyrimidine utilization protein D. This protei | 99.81 | |
| PF00561 | 230 | Abhydrolase_1: alpha/beta hydrolase fold A web pag | 99.81 | |
| PRK06814 | 1140 | acylglycerophosphoethanolamine acyltransferase; Pr | 99.8 | |
| TIGR01738 | 245 | bioH putative pimeloyl-BioC--CoA transferase BioH. | 99.8 | |
| PLN03084 | 383 | alpha/beta hydrolase fold protein; Provisional | 99.8 | |
| PRK00175 | 379 | metX homoserine O-acetyltransferase; Provisional | 99.8 | |
| TIGR01392 | 351 | homoserO_Ac_trn homoserine O-acetyltransferase. Th | 99.8 | |
| cd07993 | 205 | LPLAT_DHAPAT-like Lysophospholipid Acyltransferase | 99.79 | |
| PHA02857 | 276 | monoglyceride lipase; Provisional | 99.78 | |
| PRK11126 | 242 | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl | 99.78 | |
| TIGR01250 | 288 | pro_imino_pep_2 proline-specific peptidases, Bacil | 99.78 | |
| TIGR02427 | 251 | protocat_pcaD 3-oxoadipate enol-lactonase. Members | 99.77 | |
| cd07985 | 235 | LPLAT_GPAT Lysophospholipid Acyltransferases (LPLA | 99.77 | |
| PLN02298 | 330 | hydrolase, alpha/beta fold family protein | 99.76 | |
| TIGR03695 | 251 | menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene | 99.75 | |
| PRK10749 | 330 | lysophospholipase L2; Provisional | 99.75 | |
| PRK14014 | 301 | putative acyltransferase; Provisional | 99.74 | |
| cd07983 | 189 | LPLAT_DUF374-like Lysophospholipid Acyltransferase | 99.73 | |
| cd06551 | 187 | LPLAT Lysophospholipid acyltransferases (LPLATs) o | 99.73 | |
| KOG2382 | 315 | consensus Predicted alpha/beta hydrolase [General | 99.72 | |
| PLN02894 | 402 | hydrolase, alpha/beta fold family protein | 99.72 | |
| PLN02499 | 498 | glycerol-3-phosphate acyltransferase | 99.72 | |
| PLN02211 | 273 | methyl indole-3-acetate methyltransferase | 99.71 | |
| PLN02980 | 1655 | 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi | 99.7 | |
| PLN02833 | 376 | glycerol acyltransferase family protein | 99.69 | |
| PLN02652 | 395 | hydrolase; alpha/beta fold family protein | 99.69 | |
| smart00563 | 118 | PlsC Phosphate acyltransferases. Function in phosp | 99.69 | |
| PLN02511 | 388 | hydrolase | 99.68 | |
| TIGR03703 | 799 | plsB glycerol-3-phosphate O-acyltransferase. Membe | 99.68 | |
| PRK04974 | 818 | glycerol-3-phosphate acyltransferase; Validated | 99.67 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 99.67 | |
| PRK14875 | 371 | acetoin dehydrogenase E2 subunit dihydrolipoyllysi | 99.67 | |
| PF03982 | 297 | DAGAT: Diacylglycerol acyltransferase ; InterPro: | 99.66 | |
| TIGR01249 | 306 | pro_imino_pep_1 proline iminopeptidase, Neisseria- | 99.66 | |
| COG2267 | 298 | PldB Lysophospholipase [Lipid metabolism] | 99.66 | |
| PRK03355 | 783 | glycerol-3-phosphate acyltransferase; Validated | 99.65 | |
| cd07989 | 184 | LPLAT_AGPAT-like Lysophospholipid Acyltransferases | 99.65 | |
| KOG2984 | 277 | consensus Predicted hydrolase [General function pr | 99.64 | |
| KOG1455 | 313 | consensus Lysophospholipase [Lipid transport and m | 99.63 | |
| PLN02510 | 374 | probable 1-acyl-sn-glycerol-3-phosphate acyltransf | 99.63 | |
| KOG4321 | 279 | consensus Predicted phosphate acyltransferases [Li | 99.61 | |
| PTZ00374 | 1108 | dihydroxyacetone phosphate acyltransferase; Provis | 99.58 | |
| cd07990 | 193 | LPLAT_LCLAT1-like Lysophospholipid Acyltransferase | 99.56 | |
| PLN02588 | 525 | glycerol-3-phosphate acyltransferase | 99.56 | |
| TIGR03100 | 274 | hydr1_PEP hydrolase, ortholog 1, exosortase system | 99.54 | |
| TIGR01607 | 332 | PST-A Plasmodium subtelomeric family (PST-A). Thes | 99.53 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.52 | |
| PRK10985 | 324 | putative hydrolase; Provisional | 99.51 | |
| COG2021 | 368 | MET2 Homoserine acetyltransferase [Amino acid tran | 99.49 | |
| COG1647 | 243 | Esterase/lipase [General function prediction only] | 99.49 | |
| TIGR01838 | 532 | PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, | 99.46 | |
| TIGR01836 | 350 | PHA_synth_III_C poly(R)-hydroxyalkanoic acid synth | 99.44 | |
| cd07984 | 192 | LPLAT_LABLAT-like Lysophospholipid Acyltransferase | 99.44 | |
| PRK05077 | 414 | frsA fermentation/respiration switch protein; Revi | 99.38 | |
| COG0596 | 282 | MhpC Predicted hydrolases or acyltransferases (alp | 99.37 | |
| PLN02380 | 376 | 1-acyl-sn-glycerol-3-phosphate acyltransferase | 99.32 | |
| PF03096 | 283 | Ndr: Ndr family; InterPro: IPR004142 This family c | 99.31 | |
| COG3208 | 244 | GrsT Predicted thioesterase involved in non-riboso | 99.3 | |
| KOG1552 | 258 | consensus Predicted alpha/beta hydrolase [General | 99.3 | |
| PRK07868 | 994 | acyl-CoA synthetase; Validated | 99.29 | |
| PRK13604 | 307 | luxD acyl transferase; Provisional | 99.29 | |
| KOG0831 | 334 | consensus Acyl-CoA:diacylglycerol acyltransferase | 99.29 | |
| PRK11071 | 190 | esterase YqiA; Provisional | 99.28 | |
| KOG2931 | 326 | consensus Differentiation-related gene 1 protein ( | 99.28 | |
| PF00326 | 213 | Peptidase_S9: Prolyl oligopeptidase family This fa | 99.26 | |
| PLN02872 | 395 | triacylglycerol lipase | 99.25 | |
| KOG2564 | 343 | consensus Predicted acetyltransferases and hydrola | 99.19 | |
| PRK11915 | 621 | glycerol-3-phosphate acyltransferase; Reviewed | 99.17 | |
| PF08538 | 303 | DUF1749: Protein of unknown function (DUF1749); In | 99.11 | |
| TIGR01839 | 560 | PHA_synth_II poly(R)-hydroxyalkanoic acid synthase | 99.1 | |
| KOG2847 | 286 | consensus Phosphate acyltransferase [Lipid transpo | 99.09 | |
| PRK10566 | 249 | esterase; Provisional | 99.03 | |
| PRK11460 | 232 | putative hydrolase; Provisional | 99.0 | |
| PF06821 | 171 | Ser_hydrolase: Serine hydrolase; InterPro: IPR0106 | 99.0 | |
| PF12695 | 145 | Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3 | 98.95 | |
| PF10230 | 266 | DUF2305: Uncharacterised conserved protein (DUF230 | 98.93 | |
| PF06342 | 297 | DUF1057: Alpha/beta hydrolase of unknown function | 98.92 | |
| TIGR01849 | 406 | PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, | 98.89 | |
| PLN02442 | 283 | S-formylglutathione hydrolase | 98.88 | |
| KOG4667 | 269 | consensus Predicted esterase [Lipid transport and | 98.84 | |
| PF02230 | 216 | Abhydrolase_2: Phospholipase/Carboxylesterase; Int | 98.78 | |
| PF08840 | 213 | BAAT_C: BAAT / Acyl-CoA thioester hydrolase C term | 98.78 | |
| KOG1838 | 409 | consensus Alpha/beta hydrolase [General function p | 98.76 | |
| COG0429 | 345 | Predicted hydrolase of the alpha/beta-hydrolase fo | 98.73 | |
| COG3243 | 445 | PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid me | 98.72 | |
| TIGR02821 | 275 | fghA_ester_D S-formylglutathione hydrolase. This m | 98.69 | |
| KOG4391 | 300 | consensus Predicted alpha/beta hydrolase BEM46 [Ge | 98.68 | |
| COG1506 | 620 | DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept | 98.66 | |
| TIGR03101 | 266 | hydr2_PEP hydrolase, ortholog 2, exosortase system | 98.6 | |
| PF00975 | 229 | Thioesterase: Thioesterase domain; InterPro: IPR00 | 98.59 | |
| PF01738 | 218 | DLH: Dienelactone hydrolase family; InterPro: IPR0 | 98.57 | |
| PF05728 | 187 | UPF0227: Uncharacterised protein family (UPF0227); | 98.56 | |
| COG3545 | 181 | Predicted esterase of the alpha/beta hydrolase fol | 98.54 | |
| COG0400 | 207 | Predicted esterase [General function prediction on | 98.47 | |
| TIGR01840 | 212 | esterase_phb esterase, PHB depolymerase family. Th | 98.42 | |
| PF11339 | 581 | DUF3141: Protein of unknown function (DUF3141); In | 98.4 | |
| TIGR03230 | 442 | lipo_lipase lipoprotein lipase. Members of this pr | 98.39 | |
| COG4757 | 281 | Predicted alpha/beta hydrolase [General function p | 98.34 | |
| COG2945 | 210 | Predicted hydrolase of the alpha/beta superfamily | 98.34 | |
| PRK08419 | 298 | lipid A biosynthesis lauroyl acyltransferase; Revi | 98.32 | |
| KOG1505 | 346 | consensus Lysophosphatidic acid acyltransferase LP | 98.29 | |
| PF06028 | 255 | DUF915: Alpha/beta hydrolase of unknown function ( | 98.27 | |
| cd00707 | 275 | Pancreat_lipase_like Pancreatic lipase-like enzyme | 98.26 | |
| PF05448 | 320 | AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR0 | 98.25 | |
| PF03959 | 212 | FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 | 98.23 | |
| PF09752 | 348 | DUF2048: Uncharacterized conserved protein (DUF204 | 98.23 | |
| PRK10115 | 686 | protease 2; Provisional | 98.22 | |
| COG3176 | 292 | Putative hemolysin [General function prediction on | 98.22 | |
| PTZ00472 | 462 | serine carboxypeptidase (CBP1); Provisional | 98.21 | |
| PLN00021 | 313 | chlorophyllase | 98.19 | |
| PLN02733 | 440 | phosphatidylcholine-sterol O-acyltransferase | 98.18 | |
| PF06500 | 411 | DUF1100: Alpha/beta hydrolase of unknown function | 98.16 | |
| COG3571 | 213 | Predicted hydrolase of the alpha/beta-hydrolase fo | 98.16 | |
| COG2121 | 214 | Uncharacterized protein conserved in bacteria [Fun | 98.15 | |
| KOG3975 | 301 | consensus Uncharacterized conserved protein [Funct | 98.14 | |
| KOG4840 | 299 | consensus Predicted hydrolases or acyltransferases | 98.06 | |
| PRK07920 | 298 | lipid A biosynthesis lauroyl acyltransferase; Prov | 98.05 | |
| PF06057 | 192 | VirJ: Bacterial virulence protein (VirJ); InterPro | 98.05 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 97.97 | |
| PF07859 | 211 | Abhydrolase_3: alpha/beta hydrolase fold A web pag | 97.97 | |
| PF07819 | 225 | PGAP1: PGAP1-like protein; InterPro: IPR012908 The | 97.9 | |
| PRK10162 | 318 | acetyl esterase; Provisional | 97.89 | |
| KOG2624 | 403 | consensus Triglyceride lipase-cholesterol esterase | 97.89 | |
| COG0412 | 236 | Dienelactone hydrolase and related enzymes [Second | 97.88 | |
| PRK05371 | 767 | x-prolyl-dipeptidyl aminopeptidase; Provisional | 97.86 | |
| COG3319 | 257 | Thioesterase domains of type I polyketide synthase | 97.85 | |
| COG2937 | 810 | PlsB Glycerol-3-phosphate O-acyltransferase [Lipid | 97.83 | |
| KOG2565 | 469 | consensus Predicted hydrolases or acyltransferases | 97.81 | |
| PF08386 | 103 | Abhydrolase_4: TAP-like protein; InterPro: IPR0135 | 97.8 | |
| TIGR00976 | 550 | /NonD putative hydrolase, CocE/NonD family. This m | 97.71 | |
| KOG3043 | 242 | consensus Predicted hydrolase related to dienelact | 97.7 | |
| PF02129 | 272 | Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 fam | 97.65 | |
| PLN02349 | 426 | glycerol-3-phosphate acyltransferase | 97.64 | |
| KOG3729 | 715 | consensus Mitochondrial glycerol-3-phosphate acylt | 97.64 | |
| PF10503 | 220 | Esterase_phd: Esterase PHB depolymerase | 97.56 | |
| PRK04940 | 180 | hypothetical protein; Provisional | 97.54 | |
| KOG4627 | 270 | consensus Kynurenine formamidase [Amino acid trans | 97.53 | |
| cd00741 | 153 | Lipase Lipase. Lipases are esterases that can hydr | 97.5 | |
| PF03279 | 295 | Lip_A_acyltrans: Bacterial lipid A biosynthesis ac | 97.48 | |
| COG1560 | 308 | HtrB Lauroyl/myristoyl acyltransferase [Cell envel | 97.47 | |
| PF02273 | 294 | Acyl_transf_2: Acyl transferase; InterPro: IPR0031 | 97.43 | |
| COG3458 | 321 | Acetyl esterase (deacetylase) [Secondary metabolit | 97.4 | |
| PF02450 | 389 | LCAT: Lecithin:cholesterol acyltransferase; InterP | 97.39 | |
| PF00450 | 415 | Peptidase_S10: Serine carboxypeptidase; InterPro: | 97.32 | |
| PF10142 | 367 | PhoPQ_related: PhoPQ-activated pathogenicity-relat | 97.23 | |
| PF06259 | 177 | Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR | 97.2 | |
| PRK06553 | 308 | lipid A biosynthesis lauroyl acyltransferase; Prov | 97.13 | |
| PF00756 | 251 | Esterase: Putative esterase; InterPro: IPR000801 T | 97.12 | |
| PF04301 | 213 | DUF452: Protein of unknown function (DUF452); Inte | 97.07 | |
| KOG3253 | 784 | consensus Predicted alpha/beta hydrolase [General | 97.06 | |
| KOG2100 | 755 | consensus Dipeptidyl aminopeptidase [Posttranslati | 97.04 | |
| COG0657 | 312 | Aes Esterase/lipase [Lipid metabolism] | 96.99 | |
| PF03583 | 290 | LIP: Secretory lipase ; InterPro: IPR005152 This e | 96.98 | |
| PRK10439 | 411 | enterobactin/ferric enterobactin esterase; Provisi | 96.98 | |
| PF05705 | 240 | DUF829: Eukaryotic protein of unknown function (DU | 96.95 | |
| PF03403 | 379 | PAF-AH_p_II: Platelet-activating factor acetylhydr | 96.89 | |
| PF12740 | 259 | Chlorophyllase2: Chlorophyllase enzyme; InterPro: | 96.88 | |
| KOG1551 | 371 | consensus Uncharacterized conserved protein [Funct | 96.84 | |
| PF00151 | 331 | Lipase: Lipase; InterPro: IPR013818 Triglyceride l | 96.82 | |
| PRK06628 | 290 | lipid A biosynthesis lauroyl acyltransferase; Prov | 96.81 | |
| KOG1515 | 336 | consensus Arylacetamide deacetylase [Defense mecha | 96.8 | |
| cd00519 | 229 | Lipase_3 Lipase (class 3). Lipases are esterases t | 96.72 | |
| PRK05646 | 310 | lipid A biosynthesis lauroyl acyltransferase; Prov | 96.69 | |
| PF01764 | 140 | Lipase_3: Lipase (class 3); InterPro: IPR002921 Tr | 96.69 | |
| COG4814 | 288 | Uncharacterized protein with an alpha/beta hydrola | 96.68 | |
| PF05990 | 233 | DUF900: Alpha/beta hydrolase of unknown function ( | 96.61 | |
| COG2819 | 264 | Predicted hydrolase of the alpha/beta superfamily | 96.6 | |
| PRK08025 | 305 | lipid A biosynthesis palmitoleoyl acyltransferase; | 96.6 | |
| KOG2112 | 206 | consensus Lysophospholipase [Lipid transport and m | 96.54 | |
| KOG2551 | 230 | consensus Phospholipase/carboxyhydrolase [Amino ac | 96.52 | |
| PRK08706 | 289 | lipid A biosynthesis lauroyl acyltransferase; Prov | 96.51 | |
| PRK06946 | 293 | lipid A biosynthesis lauroyl acyltransferase; Prov | 96.46 | |
| PRK08733 | 306 | lipid A biosynthesis lauroyl acyltransferase; Prov | 96.46 | |
| PRK08943 | 314 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA ac | 96.44 | |
| PRK06860 | 309 | lipid A biosynthesis lauroyl acyltransferase; Prov | 96.43 | |
| PF05577 | 434 | Peptidase_S28: Serine carboxypeptidase S28; InterP | 96.43 | |
| COG4188 | 365 | Predicted dienelactone hydrolase [General function | 96.35 | |
| PRK08734 | 305 | lipid A biosynthesis lauroyl acyltransferase; Prov | 96.35 | |
| TIGR02207 | 303 | lipid_A_htrB lipid A biosynthesis lauroyl (or palm | 96.33 | |
| COG1075 | 336 | LipA Predicted acetyltransferases and hydrolases w | 96.32 | |
| PF01083 | 179 | Cutinase: Cutinase; InterPro: IPR000675 Aerial pla | 96.32 | |
| PRK08905 | 289 | lipid A biosynthesis lauroyl acyltransferase; Vali | 96.31 | |
| PF01674 | 219 | Lipase_2: Lipase (class 2); InterPro: IPR002918 Li | 96.28 | |
| KOG3730 | 685 | consensus Acyl-CoA:dihydroxyactetone-phosphate acy | 96.27 | |
| smart00824 | 212 | PKS_TE Thioesterase. Peptide synthetases are invol | 96.27 | |
| TIGR02208 | 305 | lipid_A_msbB lipid A biosynthesis (KDO)2-(lauroyl) | 96.25 | |
| PF11187 | 224 | DUF2974: Protein of unknown function (DUF2974); In | 96.21 | |
| PLN02454 | 414 | triacylglycerol lipase | 96.19 | |
| KOG2369 | 473 | consensus Lecithin:cholesterol acyltransferase (LC | 96.12 | |
| PLN02606 | 306 | palmitoyl-protein thioesterase | 96.08 | |
| PLN03016 | 433 | sinapoylglucose-malate O-sinapoyltransferase | 96.06 | |
| PLN02517 | 642 | phosphatidylcholine-sterol O-acyltransferase | 96.05 | |
| PF05057 | 217 | DUF676: Putative serine esterase (DUF676); InterPr | 96.03 | |
| TIGR03502 | 792 | lipase_Pla1_cef extracellular lipase, Pla-1/cef fa | 96.01 | |
| PLN02633 | 314 | palmitoyl protein thioesterase family protein | 96.01 | |
| KOG2281 | 867 | consensus Dipeptidyl aminopeptidases/acylaminoacyl | 95.92 | |
| PRK05906 | 454 | lipid A biosynthesis lauroyl acyltransferase; Prov | 95.84 | |
| KOG3724 | 973 | consensus Negative regulator of COPII vesicle form | 95.83 | |
| PF02089 | 279 | Palm_thioest: Palmitoyl protein thioesterase; Inte | 95.74 | |
| KOG1553 | 517 | consensus Predicted alpha/beta hydrolase BAT5 [Gen | 95.57 | |
| COG1770 | 682 | PtrB Protease II [Amino acid transport and metabol | 95.51 | |
| PRK15174 | 656 | Vi polysaccharide export protein VexE; Provisional | 95.43 | |
| COG4782 | 377 | Uncharacterized protein conserved in bacteria [Fun | 95.25 | |
| COG4099 | 387 | Predicted peptidase [General function prediction o | 95.2 | |
| PF05277 | 345 | DUF726: Protein of unknown function (DUF726); Inte | 95.19 | |
| PLN02162 | 475 | triacylglycerol lipase | 95.14 | |
| PLN02571 | 413 | triacylglycerol lipase | 95.13 | |
| PF11288 | 207 | DUF3089: Protein of unknown function (DUF3089); In | 95.1 | |
| COG0627 | 316 | Predicted esterase [General function prediction on | 95.09 | |
| PLN02310 | 405 | triacylglycerol lipase | 95.04 | |
| COG3509 | 312 | LpqC Poly(3-hydroxybutyrate) depolymerase [Seconda | 94.71 | |
| PRK05645 | 295 | lipid A biosynthesis lauroyl acyltransferase; Prov | 94.69 | |
| PLN00413 | 479 | triacylglycerol lipase | 94.68 | |
| KOG3101 | 283 | consensus Esterase D [General function prediction | 94.58 | |
| PLN03037 | 525 | lipase class 3 family protein; Provisional | 94.55 | |
| PF05677 | 365 | DUF818: Chlamydia CHLPS protein (DUF818); InterPro | 94.51 | |
| PLN02408 | 365 | phospholipase A1 | 93.77 | |
| COG2936 | 563 | Predicted acyl esterases [General function predict | 93.69 | |
| PLN02934 | 515 | triacylglycerol lipase | 93.69 | |
| PLN02324 | 415 | triacylglycerol lipase | 93.64 | |
| KOG2183 | 492 | consensus Prolylcarboxypeptidase (angiotensinase C | 93.56 | |
| KOG3847 | 399 | consensus Phospholipase A2 (platelet-activating fa | 93.54 | |
| PLN02847 | 633 | triacylglycerol lipase | 93.53 | |
| PF11144 | 403 | DUF2920: Protein of unknown function (DUF2920); In | 93.37 | |
| COG2382 | 299 | Fes Enterochelin esterase and related enzymes [Ino | 93.19 | |
| PF07224 | 307 | Chlorophyllase: Chlorophyllase; InterPro: IPR01082 | 93.17 | |
| PLN02719 | 518 | triacylglycerol lipase | 93.01 | |
| PF12048 | 310 | DUF3530: Protein of unknown function (DUF3530); In | 93.01 | |
| PLN02753 | 531 | triacylglycerol lipase | 92.9 | |
| PLN02802 | 509 | triacylglycerol lipase | 92.49 | |
| PLN02761 | 527 | lipase class 3 family protein | 92.49 | |
| KOG2182 | 514 | consensus Hydrolytic enzymes of the alpha/beta hyd | 92.09 | |
| COG1073 | 299 | Hydrolases of the alpha/beta superfamily [General | 92.05 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 91.73 | |
| COG3150 | 191 | Predicted esterase [General function prediction on | 91.57 | |
| COG1505 | 648 | Serine proteases of the peptidase family S9A [Amin | 91.4 | |
| KOG2237 | 712 | consensus Predicted serine protease [Posttranslati | 91.13 | |
| PF12715 | 390 | Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8 | 91.13 | |
| COG4553 | 415 | DepA Poly-beta-hydroxyalkanoate depolymerase [Lipi | 90.41 | |
| PLN02213 | 319 | sinapoylglucose-malate O-sinapoyltransferase/ carb | 89.61 | |
| COG4287 | 507 | PqaA PhoPQ-activated pathogenicity-related protein | 89.46 | |
| COG5153 | 425 | CVT17 Putative lipase essential for disintegration | 89.13 | |
| KOG4540 | 425 | consensus Putative lipase essential for disintegra | 89.13 | |
| PLN02209 | 437 | serine carboxypeptidase | 89.05 | |
| KOG4569 | 336 | consensus Predicted lipase [Lipid transport and me | 87.84 | |
| KOG2898 | 354 | consensus Predicted phosphate acyltransferase, con | 87.83 | |
| KOG1282 | 454 | consensus Serine carboxypeptidases (lysosomal cath | 87.61 | |
| KOG3967 | 297 | consensus Uncharacterized conserved protein [Funct | 87.13 | |
| cd00312 | 493 | Esterase_lipase Esterases and lipases (includes fu | 86.19 | |
| PF07082 | 250 | DUF1350: Protein of unknown function (DUF1350); In | 86.01 | |
| COG2830 | 214 | Uncharacterized protein conserved in bacteria [Fun | 85.25 | |
| PF10340 | 374 | DUF2424: Protein of unknown function (DUF2424); In | 85.15 | |
| KOG2541 | 296 | consensus Palmitoyl protein thioesterase [Lipid tr | 83.4 | |
| PF06850 | 202 | PHB_depo_C: PHB de-polymerase C-terminus; InterPro | 83.29 | |
| KOG2029 | 697 | consensus Uncharacterized conserved protein [Funct | 83.16 | |
| PF08237 | 225 | PE-PPE: PE-PPE domain; InterPro: IPR013228 The hum | 82.34 | |
| COG3946 | 456 | VirJ Type IV secretory pathway, VirJ component [In | 81.49 | |
| PF07519 | 474 | Tannase: Tannase and feruloyl esterase; InterPro: | 80.53 | |
| COG4947 | 227 | Uncharacterized protein conserved in bacteria [Fun | 80.03 |
| >KOG2848 consensus 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-28 Score=202.61 Aligned_cols=133 Identities=20% Similarity=0.221 Sum_probs=112.8
Q ss_pred CCCcEEeccCCCCCCCCEEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcchHHHHHHhCCccc
Q 013862 277 PDGKIVRGLSGIPSEGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRIMGSVPV 356 (435)
Q Consensus 277 ~~~~~~~~~~~~p~~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 356 (435)
..++|++|.||+|+++|+|+||||||. +|.+.++..+ +..+.+++|++++..|+ +++.+...|.+++
T Consensus 74 g~r~ev~g~E~L~~~~p~ViVsNHQS~-LDil~m~~i~----p~~cvviaKr~L~yvp~--------~gl~m~L~gvvfI 140 (276)
T KOG2848|consen 74 GLRFEVRGEENLPKSKPAVIVSNHQSS-LDILGMGSIW----PKNCVVIAKRSLFYVPI--------FGLAMYLSGVVFI 140 (276)
T ss_pred ceEEEEechhhCCccCCeEEEecchhH-HHHHHHHhhc----CCceEEEEeeeeeecch--------HHHHHHHcCceEE
Confidence 468999999999999999999999986 6887776663 45599999999998865 7777888899999
Q ss_pred cHH----------HHHHHh-cCCCeEEEecCccccccccCCccceeecCCchhHHHHHHHcCCCEEEEEEecchhhhhhh
Q 013862 357 SAI----------NFYKLV-SSKAHVLLYPGGVREAFHRKGEEYKLFWPESSEFVRVAAAFGGKIVPFGVVGEDDLAQVI 425 (435)
Q Consensus 357 ~r~----------~~~~~l-~~g~~~~ifPeG~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~ivPv~~~g~~~~~~~~ 425 (435)
||. .+.+.+ +++..|+|||||||+ .+|.+.+ ||||++++|.++++|||||++.+..++|..-
T Consensus 141 dR~r~~~Ai~~l~~~~~~mkk~~~kvWvFPEGTRn---~~g~llP----FKKGAF~lAvqaqVPIVPvv~ssy~~f~~~~ 213 (276)
T KOG2848|consen 141 DRSRREKAIDTLDKCAERMKKENRKVWVFPEGTRN---KEGRLLP----FKKGAFHLAVQAQVPIVPVVFSSYGDFYSTK 213 (276)
T ss_pred ecCCHHHHHHHHHHHHHHHHhCCeeEEEccCCccC---CCCcccc----cccceeeeehhcCCCEEEEEEecccccccCc
Confidence 996 344444 455899999999998 7787766 9999999999999999999999999988776
Q ss_pred hccc
Q 013862 426 KLEY 429 (435)
Q Consensus 426 ~~~~ 429 (435)
...|
T Consensus 214 ~k~f 217 (276)
T KOG2848|consen 214 EKVF 217 (276)
T ss_pred ccee
Confidence 5544
|
|
| >cd07987 LPLAT_MGAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-27 Score=205.42 Aligned_cols=142 Identities=37% Similarity=0.549 Sum_probs=120.1
Q ss_pred CCc-EEeccCCCCCCCCEEEEecCCcccchhHhhhHH-HhhhcCceeeeeccccccccccCCCCCCcchHHHHHHhCCcc
Q 013862 278 DGK-IVRGLSGIPSEGPVLLVGNHMLLGLEALPMVPT-FVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRIMGSVP 355 (435)
Q Consensus 278 ~~~-~~~~~~~~p~~~~~i~v~nH~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 355 (435)
+++ +++|.||+|.++++|+++||+|+.+|.+++... .....+++++++++..+|..|+ ++++++..|+++
T Consensus 5 ~~~~~v~g~e~lp~~~~~i~v~NH~s~~~D~~~l~~~~~~~~~~~~~~~la~~~~~~~p~--------~~~~~~~~g~i~ 76 (212)
T cd07987 5 FRVYEVRGLENIPDEGPALLVHPHGGLPIDGALLAAAFLLLFPGRLPRALADHFLFPLPG--------LRDLLRRLGAVP 76 (212)
T ss_pred eeeEEEeccccCCCCCcEEEEECCcchhHHHHHHHHHHHHhCCCCeeEEeecccceeCcc--------HHHHHHHcCCcc
Confidence 345 899999999999999999999985477666655 2223346799999999998765 899999999999
Q ss_pred ccHHHHHHHhcCCCeEEEecCccccccccCCccceeecCCchhHHHHHHHcCCCEEEEEEecchhhhhhhhc
Q 013862 356 VSAINFYKLVSSKAHVLLYPGGVREAFHRKGEEYKLFWPESSEFVRVAAAFGGKIVPFGVVGEDDLAQVIKL 427 (435)
Q Consensus 356 ~~r~~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~ivPv~~~g~~~~~~~~~~ 427 (435)
++|+++.+.|++|++|+|||||||++...+.+.....+++|+|++++|+++|+|||||++.|+++++.....
T Consensus 77 ~~r~~~~~~L~~G~~l~ifPeGtr~~~~~~~~~~~~~~~~~~G~~~lA~~~~~pIvPv~~~G~~~~~~~~~~ 148 (212)
T cd07987 77 GSRENCVRLLREGELVLIFPGGAREALKSKREEYYLLWKKRKGFARLALRAGAPIVPVFTFGEEELFRVLGD 148 (212)
T ss_pred cCHHHHHHHhcCCCEEEEEcCCHHHHhccCCCeEEEEECCCcCHHHHHHHcCCCeEeEEEeCcHHHHhhhcc
Confidence 999999999999999999999999865443344556678999999999999999999999999999986553
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this suubgroup are such LPLATs as 2-acylglycerol O-acyltransferase (MGAT), and similar proteins. |
| >PLN02783 diacylglycerol O-acyltransferase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-26 Score=208.93 Aligned_cols=141 Identities=18% Similarity=0.202 Sum_probs=117.2
Q ss_pred CCCcEEeccCCCCCCCCEEEEecCCcccchhHhhhHH-HhhhcC-ceeeeeccccccccccCCCCCCcchHHHHHHhCCc
Q 013862 277 PDGKIVRGLSGIPSEGPVLLVGNHMLLGLEALPMVPT-FVIERN-ILVRAIAHPMVFFNAKDGGLPDLVTYDTFRIMGSV 354 (435)
Q Consensus 277 ~~~~~~~~~~~~p~~~~~i~v~nH~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 354 (435)
..+++++|.|++|.++++|+++||+|.. |..+++.. .....+ +++++++++++|+.|+ +++++++.|.+
T Consensus 86 ~~~v~v~g~e~l~~~~~~I~~~nH~S~l-di~~~~~~~~~~~~p~~~~~~lak~~lf~iP~--------~g~~~~~~G~i 156 (315)
T PLN02783 86 PVRLHVEDEEAFDPNRAYVFGYEPHSVL-PIGVIALADLSGFLPLPKIRALASSAVFYTPF--------LRHIWTWLGLD 156 (315)
T ss_pred CeEEEEEchhhCCCCCCEEEEECCCcch-hhHHHhhhhhhhccCCCchHHHhhhhhccCcH--------HHHHHHHcCCe
Confidence 3578899999999999999999999874 55432221 111123 4689999999998876 99999999999
Q ss_pred cccHHHHHHHhcCCCeEEEecCccccccccCCccceeecCCchhHHHHHHHcCCCEEEEEEecchhhhhhhh
Q 013862 355 PVSAINFYKLVSSKAHVLLYPGGVREAFHRKGEEYKLFWPESSEFVRVAAAFGGKIVPFGVVGEDDLAQVIK 426 (435)
Q Consensus 355 ~~~r~~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~ivPv~~~g~~~~~~~~~ 426 (435)
+++|+++.+.|++|.+|+|||||+|++.+...+....++++|+||+++|.++|+|||||++.|+++.|+..+
T Consensus 157 pv~R~~~~~~Lk~G~sv~IfPeGtre~~~~~~~~~~~~~~~k~G~~~lA~~~g~PIVPv~i~G~~~~~~~~~ 228 (315)
T PLN02783 157 PASRKNFTSLLKAGYSCIIVPGGVQECLYMEHGSEVAYLKSRKGFVKIAMETGAPLVPVFCFGQTRAYKWWK 228 (315)
T ss_pred EEcHHHHHHHHhCCCEEEEEcCCchhhcccCCCccccccCCCCcHHHHHHHcCCCEEEEEEECchhhhhhhc
Confidence 999999999999999999999999987654444445566799999999999999999999999999988654
|
|
| >PRK15018 1-acyl-sn-glycerol-3-phosphate acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.7e-26 Score=198.90 Aligned_cols=126 Identities=13% Similarity=0.143 Sum_probs=105.0
Q ss_pred CCcEEeccCCCCCCCCEEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcchHHHHHHhCCcccc
Q 013862 278 DGKIVRGLSGIPSEGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRIMGSVPVS 357 (435)
Q Consensus 278 ~~~~~~~~~~~p~~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 357 (435)
.+++++|.|++|+++|+|++|||+|+ +|.+++...+ +.+..+++|+++++.|+ ++++++..|++|+|
T Consensus 51 ~~v~v~g~e~~p~~~~~IivaNH~S~-lD~~~l~~~~----~~~~~fvaK~el~~~P~--------~g~~~~~~g~i~Vd 117 (245)
T PRK15018 51 LKVECRKPADAESYGNAIYIANHQNN-YDMVTASNIV----QPPTVTVGKKSLLWIPF--------FGQLYWLTGNLLID 117 (245)
T ss_pred eEEEEEccCCCCCCCCEEEEECCCch-HHHHHHHHHh----CCCcEEEEeHHHhhCCH--------HHHHHHhCCCeEEe
Confidence 46788999999989999999999997 5665544332 23477899999998876 89999999999999
Q ss_pred HH----------HHHHHhc-CCCeEEEecCccccccccCCccceeecCCchhHHHHHHHcCCCEEEEEEecchhhhh
Q 013862 358 AI----------NFYKLVS-SKAHVLLYPGGVREAFHRKGEEYKLFWPESSEFVRVAAAFGGKIVPFGVVGEDDLAQ 423 (435)
Q Consensus 358 r~----------~~~~~l~-~g~~~~ifPeG~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~ivPv~~~g~~~~~~ 423 (435)
|+ ++.+.++ +|.+++|||||||+ ++|+..+ ||+|++++|.++|+|||||++.|+++.+.
T Consensus 118 R~~~~~~~~~l~~~~~~l~~~g~sv~IFPEGTRs---~~g~l~~----Fk~Ga~~lA~~~~~PIvPv~i~g~~~~~~ 187 (245)
T PRK15018 118 RNNRTKAHGTIAEVVNHFKKRRISIWMFPEGTRS---RGRGLLP----FKTGAFHAAIAAGVPIIPVCVSTTSNKIN 187 (245)
T ss_pred CCCHHHHHHHHHHHHHHHHhCCCEEEEECCccCC---CCCCCCC----ccHHHHHHHHHcCCCEEEEEEECcccccc
Confidence 95 3445555 47789999999999 7776655 99999999999999999999999988664
|
|
| >PTZ00261 acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1e-24 Score=193.49 Aligned_cols=122 Identities=11% Similarity=0.087 Sum_probs=100.7
Q ss_pred cCCCCCCCCEEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcchHHHHHHhCCccccHH-----
Q 013862 285 LSGIPSEGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRIMGSVPVSAI----- 359 (435)
Q Consensus 285 ~~~~p~~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~----- 359 (435)
+||+|. +++|+++||+|+ +|.+++...+.......+++++|+++|+.|+ +++++...|.+||+|+
T Consensus 123 ~EnIP~-~~~IivsNHqS~-lDi~vl~~~~p~r~~~~~~fVAKkELfkiP~--------fG~~l~~~G~IPVdR~~~~~g 192 (355)
T PTZ00261 123 WDDISR-HGCAYVGNHTSF-WDVYAFIGLTPFRHLLNTRTLMKSSLRKIPI--------FGGVFDRVGHFPVHFKSDSDG 192 (355)
T ss_pred cccCCC-CCEEEEECCCch-HHHHHHHHHcccccccccEEEEHHHHhhccH--------HHHHHHHCCCeeeeccccccc
Confidence 578995 699999999998 5776666665432223478999999998876 8999999999999862
Q ss_pred --------------HHHHHhcCCCeEEEecCccccccccCCc-cceeecCCchhHHHHHHHcCCCEEEEEEecchhhhh
Q 013862 360 --------------NFYKLVSSKAHVLLYPGGVREAFHRKGE-EYKLFWPESSEFVRVAAAFGGKIVPFGVVGEDDLAQ 423 (435)
Q Consensus 360 --------------~~~~~l~~g~~~~ifPeG~~~~~~~~~~-~~~~~~~~~~g~~~~a~~~~~~ivPv~~~g~~~~~~ 423 (435)
.+.+.|++|.+|+|||||||+ .+|+ .. +||+|++++|.++|+||||+++.|+++++.
T Consensus 193 ~~~vdrea~~~v~~~~~e~Lk~G~sLvIFPEGTRS---~~gg~L~----pFK~GaF~LAieagvPIVPvai~Gs~~~wP 264 (355)
T PTZ00261 193 NFEVDKEKQAQVQQAIDAHLRLGGSLAFFPEGAIN---KHPQVLQ----TFRYGTFATIIKHRMEVYYMVSVGSEKTWP 264 (355)
T ss_pred ccccchHHHHHHHHHHHHHHHCCCEEEEECCcCCc---CCCCcCC----CCcHHHHHHHHHcCCCEEEEEEeChhhcCC
Confidence 224679999999999999999 7654 33 499999999999999999999999999775
|
|
| >cd07986 LPLAT_ACT14924-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ACT14924 | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.4e-24 Score=183.52 Aligned_cols=128 Identities=21% Similarity=0.271 Sum_probs=99.0
Q ss_pred CCcEEeccCCCCCCCCEEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcchHHHHHHhCCcccc
Q 013862 278 DGKIVRGLSGIPSEGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRIMGSVPVS 357 (435)
Q Consensus 278 ~~~~~~~~~~~p~~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 357 (435)
++++++|.||||.+||+|+||||+|..+|.+++...+.. .+..++++++.++|+.|+ ++.+ .++++
T Consensus 8 ~~v~v~G~e~lp~~g~~iiv~NH~s~~~D~~~l~~~~~~-~~~~~~~lak~~l~~~p~--------l~~~-----~i~v~ 73 (210)
T cd07986 8 LEVDVSGLENIPKDGPVVIVANHPFGILDGLILADLLGS-VRPDVRILANQLLSKIPE--------LRDL-----FIPVD 73 (210)
T ss_pred EEEecCchhcCCCCCCEEEEEcCCccchHHHHHHHHHHH-hCCCeEEEeHHhhhhCcc--------hHhh-----EEecc
Confidence 478999999999999999999998644687666554432 234689999999997764 4444 36665
Q ss_pred HH--------------HHHHHhcCCCeEEEecCccccccccCCcc-ce-eecCCchhHHHHHHHcCCCEEEEEEecchhh
Q 013862 358 AI--------------NFYKLVSSKAHVLLYPGGVREAFHRKGEE-YK-LFWPESSEFVRVAAAFGGKIVPFGVVGEDDL 421 (435)
Q Consensus 358 r~--------------~~~~~l~~g~~~~ifPeG~~~~~~~~~~~-~~-~~~~~~~g~~~~a~~~~~~ivPv~~~g~~~~ 421 (435)
|. ++.+.|++|++|+|||||||+ .++.. .+ ...+||+|++++|.++++|||||++.|.+..
T Consensus 74 r~~~~~~~~~~~~~~~~~~~~L~~G~~l~IFPEGtrs---~~~~~~g~~~~~~fk~G~~~lA~~~~~pIvPv~i~g~~~~ 150 (210)
T cd07986 74 PLEGRAALAKNRESLREALRHLKNGGALIIFPAGRVS---TASPPFGRVSDRPWNPFVARLARKAKAPVVPVYFSGRNSR 150 (210)
T ss_pred CCCCcchhhhhHHHHHHHHHHHhCCCEEEEECCcccc---cccccCCccccCCccHHHHHHHHHHCCCEEEEEEeeeCcH
Confidence 42 778899999999999999999 54331 00 0124999999999999999999999998765
Q ss_pred h
Q 013862 422 A 422 (435)
Q Consensus 422 ~ 422 (435)
+
T Consensus 151 ~ 151 (210)
T cd07986 151 L 151 (210)
T ss_pred H
Confidence 4
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are uncharacterized phospholipid/glycerol acyltransferases such as the Pectobacterium carotovorum subsp. carotovorum PC1 locus ACT14924 putative acyltransferase, and similar proteins. |
| >PLN02901 1-acyl-sn-glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.6e-23 Score=180.35 Aligned_cols=126 Identities=23% Similarity=0.371 Sum_probs=106.8
Q ss_pred CCCcEEeccCCCCC-CCCEEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcchHHHHHHhCCcc
Q 013862 277 PDGKIVRGLSGIPS-EGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRIMGSVP 355 (435)
Q Consensus 277 ~~~~~~~~~~~~p~-~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 355 (435)
..+++++|.|++|+ ++|+|+||||+|+ +|.+++.. ..+++.+++|.++++.|+ +++++...|++|
T Consensus 34 ~~~~~v~g~e~lp~~~~p~iiv~NH~S~-~D~~~l~~-----~~~~~~~v~k~~l~~~P~--------~g~~~~~~~~i~ 99 (214)
T PLN02901 34 FYKIEVEGLENLPSPDEPAVYVSNHQSF-LDIYTLFH-----LGRPFKFISKTSIFLIPI--------IGWAMYMTGHIP 99 (214)
T ss_pred ceeEEEECCccCCCCCCcEEEEECCCCc-hHHHHHhh-----cCCceEEEEEHHhhhccH--------HHHHHHHCCcEE
Confidence 45889999999996 6899999999997 56654432 124588999999998876 888999999999
Q ss_pred ccHH----------HHHHHhcCCCeEEEecCccccccccCCccceeecCCchhHHHHHHHcCCCEEEEEEecchhhhh
Q 013862 356 VSAI----------NFYKLVSSKAHVLLYPGGVREAFHRKGEEYKLFWPESSEFVRVAAAFGGKIVPFGVVGEDDLAQ 423 (435)
Q Consensus 356 ~~r~----------~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~ivPv~~~g~~~~~~ 423 (435)
++|+ ++.+.|++|.+++|||||||+ .+++..+ |++|++++|.++++||||+++.|+++.+.
T Consensus 100 v~R~~~~~~~~~~~~~~~~l~~g~~v~IfPEGtr~---~~~~~~~----f~~G~~~lA~~~~~pIvPv~i~g~~~~~~ 170 (214)
T PLN02901 100 LKRMDRRSQLECLKRCMELLKKGASVFFFPEGTRS---KDGKLAA----FKKGAFSVAAKTGVPVVPITLVGTGKIMP 170 (214)
T ss_pred EecCCcHHHHHHHHHHHHHHhCCCEEEEeCCCCCC---CCCcccC----chhhHHHHHHHcCCCEEEEEEecchhhCc
Confidence 9984 567888999999999999998 5565544 99999999999999999999999988765
|
|
| >cd07992 LPLAT_AAK14816-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown AAK14816-like | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.3e-23 Score=175.39 Aligned_cols=130 Identities=24% Similarity=0.299 Sum_probs=106.2
Q ss_pred eecccCCCcEEeccCCCCCCCCEEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcchHHHHHHh
Q 013862 272 MLSTLPDGKIVRGLSGIPSEGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRIM 351 (435)
Q Consensus 272 ~~~~~~~~~~~~~~~~~p~~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (435)
+....+.++++.|.||+|.++|+|+++||++..+|.++++.. .+++++++++..+++.|+ +++++...
T Consensus 8 ~~~~~~~~v~v~G~e~lp~~~~~I~v~NH~~s~~D~~~l~~~----~~~~~~~v~~~~~~~~p~--------~~~~~~~~ 75 (203)
T cd07992 8 ILRIYFRRITVVGRENVPKDGPVIFLGNHPNALIDPLLLAAT----LRRPVRFLAKADLFKNPL--------IGWLLESF 75 (203)
T ss_pred hhhhEeeeeEEECCccCCCCCCEEEEeCCccchhhHHHHHHh----cCCCcEEEEEhhhccchH--------HHHHHHHc
Confidence 334445578999999999999999999999433577665554 235699999999998765 89999999
Q ss_pred CCccccHH------------------HHHHHhcCCCeEEEecCccccccccCCccceeecCCchhHHHHHHH------cC
Q 013862 352 GSVPVSAI------------------NFYKLVSSKAHVLLYPGGVREAFHRKGEEYKLFWPESSEFVRVAAA------FG 407 (435)
Q Consensus 352 g~~~~~r~------------------~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~~~~~~~~g~~~~a~~------~~ 407 (435)
|++|++|+ .+.+.|++|.+++|||||||+ .++...+ ||+|++++|.+ ++
T Consensus 76 g~ipI~r~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~l~IFPEGtr~---~~~~~~~----fk~G~~~lA~~a~~~~~~~ 148 (203)
T cd07992 76 GAIPVYRPKDLARGGIGKISNAAVFDAVGEALKAGGAIGIFPEGGSH---DRPRLLP----LKAGAARMALEALEAGQKD 148 (203)
T ss_pred CceEeEcCCCcccccccchhHHHHHHHHHHHHhCCCEEEEeCCCCCC---CCCCccC----cCccHHHHHHHHHhcCCCC
Confidence 99999863 567888999999999999998 5554444 99999999986 69
Q ss_pred CCEEEEEEecchh
Q 013862 408 GKIVPFGVVGEDD 420 (435)
Q Consensus 408 ~~ivPv~~~g~~~ 420 (435)
+|||||++.+...
T Consensus 149 vpIvPv~i~~~~~ 161 (203)
T cd07992 149 VKIVPVGLNYEDK 161 (203)
T ss_pred CeEEeeeEEeCCC
Confidence 9999999997654
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are uncharacterized glycerol-3-phosphate acyltransferases such as the Plasmodium falciparum locus AAK14816 putative acyltransferase, and similar proteins. |
| >COG0204 PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.8e-23 Score=183.45 Aligned_cols=134 Identities=28% Similarity=0.412 Sum_probs=112.1
Q ss_pred cCCCcEEeccCCCCCCCCEEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcchHHHHHHhCCcc
Q 013862 276 LPDGKIVRGLSGIPSEGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRIMGSVP 355 (435)
Q Consensus 276 ~~~~~~~~~~~~~p~~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 355 (435)
...+++++|.||+|.++++|++|||+|+ .|.+++...+.... ++++++|.++++.|+ ++++++..|+++
T Consensus 48 ~~~r~~v~G~e~lp~~~~~ivvaNH~S~-~D~~~l~~~~~~~~--~~~f~~k~~l~~~p~--------~g~~~~~~~~i~ 116 (255)
T COG0204 48 FGLRVEVEGLENLPKGGPALVVANHQSF-LDPLLLSLALPRRG--PVRFVAKKELFKVPL--------LGWLLRLLGAIP 116 (255)
T ss_pred hCceEEEEeeecCCCCCCEEEEECchhh-hhHHHHhhhcCCCc--ceEEEeehhhccCch--------HHHHHHHcCeeE
Confidence 4468999999999988999999999996 68877766654443 589999999998876 889999999999
Q ss_pred ccHH--------HHHHHhcC-CCeEEEecCccccccccCCc-cceeecCCchhHHHHHHHcCCCEEEEEEecchhhhhhh
Q 013862 356 VSAI--------NFYKLVSS-KAHVLLYPGGVREAFHRKGE-EYKLFWPESSEFVRVAAAFGGKIVPFGVVGEDDLAQVI 425 (435)
Q Consensus 356 ~~r~--------~~~~~l~~-g~~~~ifPeG~~~~~~~~~~-~~~~~~~~~~g~~~~a~~~~~~ivPv~~~g~~~~~~~~ 425 (435)
+||+ .+.+.+++ |..++|||||||+ ++|+ .. ++|+|++++|.++++||+|+.+.|..+.+...
T Consensus 117 v~r~~~~~~~~~~~~~~~~~~g~~l~iFPEGtr~---~~~~~~~----~~k~g~~~~a~~~~~PivPv~i~g~~~~~~~~ 189 (255)
T COG0204 117 VDRENPDDETLRAAVARLKAGGRSLVIFPEGTRS---RGGEELL----PFKRGAARLALEAGVPIVPVAIVGAEELFPSL 189 (255)
T ss_pred ecCCCCcHHHHHHHHHHHHhCCcEEEECCCcCcC---CCccccC----CCcchHHHHHHHcCCCEEeEEEeCCcccccCC
Confidence 9997 33444444 7999999999999 5544 33 49999999999999999999999999887766
Q ss_pred hc
Q 013862 426 KL 427 (435)
Q Consensus 426 ~~ 427 (435)
..
T Consensus 190 ~~ 191 (255)
T COG0204 190 KK 191 (255)
T ss_pred Cc
Confidence 54
|
|
| >PLN02824 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.2e-21 Score=179.30 Aligned_cols=214 Identities=15% Similarity=0.098 Sum_probs=126.2
Q ss_pred CccccccC------CCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccc
Q 013862 2 YGACIFQL------QIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRK 75 (435)
Q Consensus 2 yG~s~~p~------~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~ 75 (435)
||.|..+. +..|+++++++|+.+++++++. ++++|+||||||.+++.+|.++|++|+++|++++......
T Consensus 66 ~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l~~----~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~ 141 (294)
T PLN02824 66 YGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDVVG----DPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLH 141 (294)
T ss_pred CCCCCCCccccccccccCCHHHHHHHHHHHHHHhcC----CCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCccccc
Confidence 67777553 2468999999999999999987 5899999999999999999999999999999998642111
Q ss_pred cccccccccccccccchhHHHHH------HHHHhhcCChhHHHHHhhhhccch-hHHHHHhHHhHHhhhcchhHHhccCC
Q 013862 76 SLLQTIMPIPAELMSGQMTLTLS------YLLSLLTGDPLKMAMDSIVKGLFL-QSTIQERSQDFVAMSSYLPVLANILP 148 (435)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (435)
.... ... ...........+. .+.... .... ............ ..........+.. ....
T Consensus 142 ~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~ 207 (294)
T PLN02824 142 IKKQ--PWL-GRPFIKAFQNLLRETAVGKAFFKSV-ATPE-TVKNILCQCYHDDSAVTDELVEAILR---------PGLE 207 (294)
T ss_pred cccc--chh-hhHHHHHHHHHHhchhHHHHHHHhh-cCHH-HHHHHHHHhccChhhccHHHHHHHHh---------ccCC
Confidence 0000 000 0000000000000 000000 0000 000000000000 0000000000000 0000
Q ss_pred chhhhhHHhhhhh-hhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHH
Q 013862 149 KETLLWKLELLKS-ASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTT 227 (435)
Q Consensus 149 ~~~~~~~~~~~~~-~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~ 227 (435)
............. ......+.+.++++|+|+|+|++|.+++.+ .++.+.+..+++++++++++||++++|+|++|++.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~ 286 (294)
T PLN02824 208 PGAVDVFLDFISYSGGPLPEELLPAVKCPVLIAWGEKDPWEPVE-LGRAYANFDAVEDFIVLPGVGHCPQDEAPELVNPL 286 (294)
T ss_pred chHHHHHHHHhccccccchHHHHhhcCCCeEEEEecCCCCCChH-HHHHHHhcCCccceEEeCCCCCChhhhCHHHHHHH
Confidence 0001111111100 011123557889999999999999999998 68888888888999999999999999999999999
Q ss_pred Hhhcccccc
Q 013862 228 IKGAGYYRR 236 (435)
Q Consensus 228 I~~~~Fl~~ 236 (435)
|.+ |+++
T Consensus 287 i~~--fl~~ 293 (294)
T PLN02824 287 IES--FVAR 293 (294)
T ss_pred HHH--HHhc
Confidence 999 8754
|
|
| >cd07988 LPLAT_ABO13168-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ABO13168 | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.9e-22 Score=164.17 Aligned_cols=120 Identities=14% Similarity=0.145 Sum_probs=95.2
Q ss_pred CCcEEeccCCCCC-CCCEEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcchHHHHHHhCCccc
Q 013862 278 DGKIVRGLSGIPS-EGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRIMGSVPV 356 (435)
Q Consensus 278 ~~~~~~~~~~~p~-~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 356 (435)
.+++++|. +|. ++++|+++||+|+ +|.++++..+.. .++++++++|+++|+.| ++++++..|.+++
T Consensus 8 ~g~~~~g~--~p~~~~~~iiv~NH~S~-~D~~~l~~~~~~-~~~~~~~vak~~l~~~p---------~g~~~~~~g~i~V 74 (163)
T cd07988 8 SGWRIEGE--PPNKPKFVVIGAPHTSN-WDFVLGLLAAFA-LGLKISFLGKHSLFKPP---------LGPFMRWLGGIPV 74 (163)
T ss_pred cCEEEEeE--cCCCCceEEEEECCCcc-HHHHHHHHHHHh-cCCceEEEEEHHhhhCc---------HHHHHHHcCCEEe
Confidence 46778775 675 4799999999998 577665544322 34568999999999874 3788999999999
Q ss_pred cHH-------HHHHHhcCC--CeEEEecCccccccccCCccceeecCCchhHHHHHHHcCCCEEEEEEecchh
Q 013862 357 SAI-------NFYKLVSSK--AHVLLYPGGVREAFHRKGEEYKLFWPESSEFVRVAAAFGGKIVPFGVVGEDD 420 (435)
Q Consensus 357 ~r~-------~~~~~l~~g--~~~~ifPeG~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~ivPv~~~g~~~ 420 (435)
+|+ ++.+.+++| .+|+|||||||+ .++ +||+|++++|.++++||+||++.+...
T Consensus 75 ~r~~~~~~~~~~~~~l~~g~~~~l~IFPEGtR~---~~~-------~fk~G~~~lA~~~~~PIvPv~i~~~~~ 137 (163)
T cd07988 75 DRSRAGGLVEQVVEEFRRREEFVLAIAPEGTRS---KVD-------KWKTGFYHIARGAGVPILLVYLDYKRK 137 (163)
T ss_pred EcCCcccHHHHHHHHHHhCCCcEEEEeCCCCCC---CCc-------ChhhHHHHHHHHcCCCEEEEEEecCcE
Confidence 985 566677765 489999999998 421 489999999999999999999998754
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are uncharacterized phospholipid/glycerol acyltransferases such as the Acinetobacter baumannii ATCC 17978 locus ABO13168 putative acyltransferase, and similar proteins. |
| >PLN02965 Probable pheophorbidase | Back alignment and domain information |
|---|
Probab=99.87 E-value=1e-21 Score=175.63 Aligned_cols=211 Identities=12% Similarity=0.094 Sum_probs=123.7
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
+|.|..++...++++++++|+.+++++++.. ++++|+||||||.+++.+|.++|++|+++|++++............
T Consensus 41 ~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~---~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 117 (255)
T PLN02965 41 AGISLTDSNTVSSSDQYNRPLFALLSDLPPD---HKVILVGHSIGGGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPR 117 (255)
T ss_pred CCCCCCCccccCCHHHHHHHHHHHHHhcCCC---CCEEEEecCcchHHHHHHHHhCchheeEEEEEccccCCCCCCccHH
Confidence 6778666556789999999999999998752 4899999999999999999999999999999998632111000000
Q ss_pred cccccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhh
Q 013862 82 MPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKS 161 (435)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (435)
........................... .................... .............. +..
T Consensus 118 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~ 181 (255)
T PLN02965 118 ----LKNVMEGTEKIWDYTFGEGPDKPPTGI-------MMKPEFVRHYYYNQSPLEDY-TLSSKLLRPAPVRA----FQD 181 (255)
T ss_pred ----HHhhhhccccceeeeeccCCCCCcchh-------hcCHHHHHHHHhcCCCHHHH-HHHHHhcCCCCCcc----hhh
Confidence 000000000000000000000000000 00000000000000000000 00000000000000 000
Q ss_pred hhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhccccc
Q 013862 162 ASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYR 235 (435)
Q Consensus 162 ~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~ 235 (435)
. ......+..+++|+++++|++|..+|+. ..+.+.+.+++++++++++|||++++|+|++|++.|.+ |++
T Consensus 182 ~-~~~~~~~~~i~vP~lvi~g~~D~~~~~~-~~~~~~~~~~~a~~~~i~~~GH~~~~e~p~~v~~~l~~--~~~ 251 (255)
T PLN02965 182 L-DKLPPNPEAEKVPRVYIKTAKDNLFDPV-RQDVMVENWPPAQTYVLEDSDHSAFFSVPTTLFQYLLQ--AVS 251 (255)
T ss_pred h-hhccchhhcCCCCEEEEEcCCCCCCCHH-HHHHHHHhCCcceEEEecCCCCchhhcCHHHHHHHHHH--HHH
Confidence 0 0112345578999999999999999998 79999999999999999999999999999999999999 754
|
|
| >TIGR00530 AGP_acyltrn 1-acyl-sn-glycerol-3-phosphate acyltransferases | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.9e-22 Score=157.18 Aligned_cols=118 Identities=20% Similarity=0.272 Sum_probs=100.1
Q ss_pred CcEEeccCCCCCCCCEEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcchHHHHHHhCCccccH
Q 013862 279 GKIVRGLSGIPSEGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRIMGSVPVSA 358 (435)
Q Consensus 279 ~~~~~~~~~~p~~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r 358 (435)
+++++|.|++|+++|+|+++||.+. +|.+++...+ ++++++++++.+++.|+ +++++...|+++++|
T Consensus 3 ~~~v~g~~~lp~~~~~i~v~nH~s~-~D~~~~~~~~----~~~~~~~~~~~~~~~p~--------~~~~~~~~g~~~i~r 69 (130)
T TIGR00530 3 KVEVVGPENLPAKSPVLVVANHQSN-LDPLTLSAAF----PPPIVFIAKKELKWIPF--------FGIMLWLTGAIFIDR 69 (130)
T ss_pred EEEEECcccCCCCCCEEEEECCCch-hHHHHHHHHc----CCCcEEEEhHHhhhCCH--------HHHHHHHcCCEEecC
Confidence 6789999999999999999999987 6776655543 24589999999998875 889999999999987
Q ss_pred H----------HHHHHhcCCCeEEEecCccccccccCCccceeecCCchhHHHHHHHcCCCEEEEEEe
Q 013862 359 I----------NFYKLVSSKAHVLLYPGGVREAFHRKGEEYKLFWPESSEFVRVAAAFGGKIVPFGVV 416 (435)
Q Consensus 359 ~----------~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~ivPv~~~ 416 (435)
+ ++.+.|++|.+++|||||+++ .++... +|++|++++|.++|+|||||++.
T Consensus 70 ~~~~~~~~~~~~~~~~l~~g~~v~ifPeG~~~---~~~~~~----~f~~g~~~la~~~~~pvvpv~~~ 130 (130)
T TIGR00530 70 ENIRAIATALKAAIEVLKQGRSIGVFPEGTRS---RGRDIL----PFKKGAFHIAIKAGVPILPVVLS 130 (130)
T ss_pred CChHHHHHHHHHHHHHHhCCCEEEEeCCCCCC---CCCCCC----CcchhHHHHHHHcCCCEEeEEeC
Confidence 4 478889999999999999998 555433 59999999999999999999873
|
1-acyl-sn-glycerol-3-phosphate acyltransferase is also called 1-AGP acyltransferase, lysophosphatidic acid acyltransferase, and LPA acyltransferase. |
| >PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.7e-21 Score=183.45 Aligned_cols=221 Identities=15% Similarity=0.188 Sum_probs=126.3
Q ss_pred CccccccCCCCCChHHHHHHHH-HHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIE-RTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQT 80 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~-~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~ 80 (435)
||.|..+.+..|+++++++++. .++++++. ++++++||||||.+++.+|.++|++|+++|+++++..........
T Consensus 243 ~G~S~~p~~~~ytl~~~a~~l~~~ll~~lg~----~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~ 318 (481)
T PLN03087 243 FGRSPKPADSLYTLREHLEMIERSVLERYKV----KSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQA 318 (481)
T ss_pred CCCCcCCCCCcCCHHHHHHHHHHHHHHHcCC----CCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhH
Confidence 6888766666799999999995 89999887 589999999999999999999999999999999764322111000
Q ss_pred cccccc-----ccc-cc-hhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhh--hc-chhHHhccCCch
Q 013862 81 IMPIPA-----ELM-SG-QMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAM--SS-YLPVLANILPKE 150 (435)
Q Consensus 81 ~~~~~~-----~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~ 150 (435)
.... . ... .. ........++..... .... .... ............... .. ............
T Consensus 319 ~~~~-~~~~~~~~~~~~~~~~~~~~~w~~~~~~-~~~~---~~~~---~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~ 390 (481)
T PLN03087 319 TQYV-MRKVAPRRVWPPIAFGASVACWYEHISR-TICL---VICK---NHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNA 390 (481)
T ss_pred HHHH-HHHhcccccCCccccchhHHHHHHHHHh-hhhc---cccc---chHHHHHHHHHhhhhhhhHHHHHHHHhccchh
Confidence 0000 0 000 00 000000000000000 0000 0000 000000000000000 00 000000000000
Q ss_pred hhhhHHhhhhh----hhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccc-cCchhHH
Q 013862 151 TLLWKLELLKS----ASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFL-EDGVDLV 225 (435)
Q Consensus 151 ~~~~~~~~~~~----~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~-e~pe~~~ 225 (435)
........... ..........++++|+|+|+|++|.++|++ ..+.+++.+|++++++++++||++++ |+|++++
T Consensus 391 ~~~~l~~~i~~~~~~l~~~l~~l~~~I~vPtLII~Ge~D~ivP~~-~~~~la~~iP~a~l~vI~~aGH~~~v~e~p~~fa 469 (481)
T PLN03087 391 AWHTLHNIICGSGSKLDGYLDHVRDQLKCDVAIFHGGDDELIPVE-CSYAVKAKVPRARVKVIDDKDHITIVVGRQKEFA 469 (481)
T ss_pred hHHHHHHHHhchhhhhhhHHHHHHHhCCCCEEEEEECCCCCCCHH-HHHHHHHhCCCCEEEEeCCCCCcchhhcCHHHHH
Confidence 00000000100 001112233468999999999999999999 79999999999999999999999986 9999999
Q ss_pred HHHhhccccccc
Q 013862 226 TTIKGAGYYRRG 237 (435)
Q Consensus 226 ~~I~~~~Fl~~~ 237 (435)
+.|.+ |+++.
T Consensus 470 ~~L~~--F~~~~ 479 (481)
T PLN03087 470 RELEE--IWRRS 479 (481)
T ss_pred HHHHH--Hhhcc
Confidence 99999 98765
|
|
| >PRK03592 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.1e-21 Score=174.18 Aligned_cols=215 Identities=15% Similarity=0.113 Sum_probs=123.0
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
||.|..+. ..|+++++++|+.+++++++. ++++++||||||.+|+.+|.++|++|+++|++++...... +..
T Consensus 64 ~G~S~~~~-~~~~~~~~a~dl~~ll~~l~~----~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~--~~~- 135 (295)
T PRK03592 64 MGASDKPD-IDYTFADHARYLDAWFDALGL----DDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMT--WDD- 135 (295)
T ss_pred CCCCCCCC-CCCCHHHHHHHHHHHHHHhCC----CCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcc--hhh-
Confidence 78887664 468999999999999999987 5899999999999999999999999999999998532110 000
Q ss_pred cccccccccchhHHHHHHHHHhhcCCh-----hHHHHHhhhhc---cchhHHHHHhHHhHHhhhcchhHH---hccCCch
Q 013862 82 MPIPAELMSGQMTLTLSYLLSLLTGDP-----LKMAMDSIVKG---LFLQSTIQERSQDFVAMSSYLPVL---ANILPKE 150 (435)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 150 (435)
...........+........ ........... ...++....+....... ...... .......
T Consensus 136 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 207 (295)
T PRK03592 136 -------FPPAVRELFQALRSPGEGEEMVLEENVFIERVLPGSILRPLSDEEMAVYRRPFPTP-ESRRPTLSWPRELPID 207 (295)
T ss_pred -------cchhHHHHHHHHhCcccccccccchhhHHhhcccCcccccCCHHHHHHHHhhcCCc-hhhhhhhhhhhhcCCC
Confidence 00000000000000000000 00000000000 00011111110000000 000000 0000000
Q ss_pred hhhhHHhhhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhh
Q 013862 151 TLLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKG 230 (435)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~ 230 (435)
..... ...........+.++++|+|+|+|++|.++++....+.+.+..+++++++++++||+++.|+|+++++.|.+
T Consensus 208 ~~~~~---~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~~ 284 (295)
T PRK03592 208 GEPAD---VVALVEEYAQWLATSDVPKLLINAEPGAILTTGAIRDWCRSWPNQLEITVFGAGLHFAQEDSPEEIGAAIAA 284 (295)
T ss_pred Ccchh---hHhhhhHhHHHhccCCCCeEEEeccCCcccCcHHHHHHHHHhhhhcceeeccCcchhhhhcCHHHHHHHHHH
Confidence 00000 000001123557789999999999999999555234444566789999999999999999999999999999
Q ss_pred ccccccc
Q 013862 231 AGYYRRG 237 (435)
Q Consensus 231 ~~Fl~~~ 237 (435)
|+.+.
T Consensus 285 --fl~~~ 289 (295)
T PRK03592 285 --WLRRL 289 (295)
T ss_pred --HHHHh
Confidence 88643
|
|
| >PLN02679 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.9e-20 Score=175.28 Aligned_cols=221 Identities=14% Similarity=0.124 Sum_probs=124.3
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHh-CCCceeEEEEecCCcccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAAR-NPDMDLVLILANPATSFRKSLLQT 80 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~-~p~~v~~lVli~~~~~~~~~~~~~ 80 (435)
||.|..+.+..|+++++++++.+++++++. ++++|+||||||.+++.++.+ +|++|+++|++++...........
T Consensus 125 ~G~S~~~~~~~~~~~~~a~~l~~~l~~l~~----~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~ 200 (360)
T PLN02679 125 FGASDKPPGFSYTMETWAELILDFLEEVVQ----KPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVD 200 (360)
T ss_pred CCCCCCCCCccccHHHHHHHHHHHHHHhcC----CCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccc
Confidence 788877666679999999999999999877 589999999999999998874 799999999999864321110000
Q ss_pred ccccccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhh-----hcchhHHhcc-CCchhhhh
Q 013862 81 IMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAM-----SSYLPVLANI-LPKETLLW 154 (435)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~-~~~~~~~~ 154 (435)
.. . ...... .......+. ...... ...+.. .......+......... .......... ........
T Consensus 201 ~~-~-~~~~~~-~~~~~~~~~----~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (360)
T PLN02679 201 DW-R-IKLLLP-LLWLIDFLL----KQRGIA-SALFNR-VKQRDNLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDA 271 (360)
T ss_pred hH-H-Hhhhcc-hHHHHHHHh----hchhhH-HHHHHH-hcCHHHHHHHHHHhccCcccCCHHHHHHHHhhccCCChHHH
Confidence 00 0 000000 000000000 000000 000000 00000000000000000 0000000000 00000111
Q ss_pred HHhhhhh-hhhhhhhhcccccceEEEEeeCCCCCCCChh----HHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHh
Q 013862 155 KLELLKS-ASAYANARLDAVKAQTLILCSGRDQLLPSEE----EGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIK 229 (435)
Q Consensus 155 ~~~~~~~-~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~----~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~ 229 (435)
....... ...+....+.++++|+|+|+|++|.++|.+. ..+.+.+.+++++++++++|||++++|+|+++++.|.
T Consensus 272 ~~~~~~~~~~~~~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~Pe~~~~~I~ 351 (360)
T PLN02679 272 FVSIVTGPPGPNPIKLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDRPDLVHEKLL 351 (360)
T ss_pred HHHHHhcCCCCCHHHHhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccccCHHHHHHHHH
Confidence 1111110 0011234677899999999999999998861 1245677789999999999999999999999999999
Q ss_pred hccccccc
Q 013862 230 GAGYYRRG 237 (435)
Q Consensus 230 ~~~Fl~~~ 237 (435)
+ |+.+.
T Consensus 352 ~--FL~~~ 357 (360)
T PLN02679 352 P--WLAQL 357 (360)
T ss_pred H--HHHhc
Confidence 9 88643
|
|
| >PF01553 Acyltransferase: Acyltransferase; InterPro: IPR002123 This family contains acyltransferases involved in phospholipid biosynthesis and other proteins of unknown function [] | Back alignment and domain information |
|---|
Probab=99.86 E-value=8.1e-23 Score=163.38 Aligned_cols=122 Identities=22% Similarity=0.343 Sum_probs=71.0
Q ss_pred CcEEeccCCCCCCCCEEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcchHHHHHHhCCccccH
Q 013862 279 GKIVRGLSGIPSEGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRIMGSVPVSA 358 (435)
Q Consensus 279 ~~~~~~~~~~p~~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r 358 (435)
+++|+|.||+|+++++|+++||+++ .|.+++...+....+..++++++..+++.|+ ++.++...|.++++|
T Consensus 1 ~v~v~g~e~l~~~~~~i~v~NH~s~-~D~~~l~~~~~~~~~~~~~~~~~~~~~~~p~--------~~~~~~~~~~i~i~r 71 (132)
T PF01553_consen 1 KVEVEGLENLPKGGGVIFVSNHQSW-LDGFALMALLQRSGPRRPRFVAKDELFKIPF--------LGWFLRRLGFIPIDR 71 (132)
T ss_dssp -----HHHHHHTT-EEEEEE----T-THHHHHHHHHTTT-HHH-EEEEECHHHH-TT--------THHHHHEEEEE--CC
T ss_pred CCccCccccCCCCCCEEEEecCCCC-CcchheeehhhhhccccceeEeeeccccchh--------hhhhhhhccceeeee
Confidence 4689999999999999999999998 6887777666444335689999999988765 888999999999999
Q ss_pred H----------HHHHHhcCCCeEEEecCccccccccCCccceeecCCchhHHHHHHHcCCCEEEEEEe
Q 013862 359 I----------NFYKLVSSKAHVLLYPGGVREAFHRKGEEYKLFWPESSEFVRVAAAFGGKIVPFGVV 416 (435)
Q Consensus 359 ~----------~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~ivPv~~~ 416 (435)
+ .+.+.+++|..|+|||||+++ ..++. .++++|++++|.++++|||||++.
T Consensus 72 ~~~~~~~~~~~~~~~~l~~~~~i~ifPEG~~~---~~~~~----~~~~~G~~~~a~~~~~~ivPv~i~ 132 (132)
T PF01553_consen 72 SNRKKNRKALKDIKEILRKGGSIVIFPEGTRS---RSGEL----LPFKKGAFHIALKAKVPIVPVAIS 132 (132)
T ss_dssp HHHHHHHHHHHHHHHHHHC---EEE-TT-S------B--B--------HHHHHHHHHH----------
T ss_pred ecccccchhHHHHHHHhhhcceeeecCCccCc---CCCcc----CCccHHHHHHHHHcCCccccccCC
Confidence 2 677888999999999999998 54444 359999999999999999999873
|
This domain is found in tafazzins, defects in which are the cause of Barth syndrome; a severe inherited disorder which is often fatal in childhood and is characterised by cardiac and skeletal abnormalities. Phospholipid/glycerol acyltransferase is not found in the viruses or the archaea and is under represented in the bacteria. Bacterial glycerol-phosphate acyltransferases are involved in membrane biogenesis since they use fatty acid chains to form the first membrane phospholipids [].; GO: 0016746 transferase activity, transferring acyl groups, 0008152 metabolic process; PDB: 1IUQ_A 1K30_A. |
| >KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.8e-21 Score=164.97 Aligned_cols=216 Identities=15% Similarity=0.089 Sum_probs=135.6
Q ss_pred CccccccCC-CCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccccccc
Q 013862 2 YGACIFQLQ-IGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQT 80 (435)
Q Consensus 2 yG~s~~p~~-~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~ 80 (435)
||.|+.|+. ..||+..++.|+..++++|+. ++++++||+||+++|+.+|..+|++|+++|.++.+..........
T Consensus 82 yG~Sd~P~~~~~Yt~~~l~~di~~lld~Lg~----~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~ 157 (322)
T KOG4178|consen 82 YGFSDAPPHISEYTIDELVGDIVALLDHLGL----KKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLD 157 (322)
T ss_pred CCCCCCCCCcceeeHHHHHHHHHHHHHHhcc----ceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhh
Confidence 899999987 889999999999999999997 699999999999999999999999999999999776511110000
Q ss_pred -c----ccccc---ccccchhHH-----HHHHHHHhhcCChhHHHHHhh-----hhccchhHHHHHhHHhHHhhhcchhH
Q 013862 81 -I----MPIPA---ELMSGQMTL-----TLSYLLSLLTGDPLKMAMDSI-----VKGLFLQSTIQERSQDFVAMSSYLPV 142 (435)
Q Consensus 81 -~----~~~~~---~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (435)
. ..... ...+..... ..+.+................ ...+..++.. +.
T Consensus 158 ~~~~~f~~~~y~~~fQ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi--------------~~ 223 (322)
T KOG4178|consen 158 SSKAIFGKSYYICLFQEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDI--------------AF 223 (322)
T ss_pred hhccccCccceeEeccccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHH--------------HH
Confidence 0 00000 000000000 000011110000000000000 0000111111 11
Q ss_pred HhccCCchhhhhHHhhhhhhhhhh---hhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCc-eEEEeCCCCccccc
Q 013862 143 LANILPKETLLWKLELLKSASAYA---NARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNC-QTRRFGGGGHFLFL 218 (435)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~-~~~~i~~~gH~~~~ 218 (435)
....+..+.+....+..+...... ...+.++++|+++++|+.|.+.+.....+.+.+..|+. +.++++|+||+++.
T Consensus 224 ~~~~f~~~g~~gplNyyrn~~r~w~a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqq 303 (322)
T KOG4178|consen 224 YVSKFQIDGFTGPLNYYRNFRRNWEAAPWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQ 303 (322)
T ss_pred HHhccccccccccchhhHHHhhCchhccccccccccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccc
Confidence 111122233333333333333222 45778899999999999999998874567777888877 78899999999999
Q ss_pred cCchhHHHHHhhccccccc
Q 013862 219 EDGVDLVTTIKGAGYYRRG 237 (435)
Q Consensus 219 e~pe~~~~~I~~~~Fl~~~ 237 (435)
|+|+++++.|.+ |++..
T Consensus 304 e~p~~v~~~i~~--f~~~~ 320 (322)
T KOG4178|consen 304 EKPQEVNQAILG--FINSF 320 (322)
T ss_pred cCHHHHHHHHHH--HHHhh
Confidence 999999999999 88643
|
|
| >PRK03204 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.9e-20 Score=168.78 Aligned_cols=204 Identities=13% Similarity=0.117 Sum_probs=118.8
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
||.|..+.+..++++++++++.+++++++. ++++++||||||.+++.+|..+|++|+++|++++............
T Consensus 71 ~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 146 (286)
T PRK03204 71 FGLSERPSGFGYQIDEHARVIGEFVDHLGL----DRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKA 146 (286)
T ss_pred CCCCCCCCccccCHHHHHHHHHHHHHHhCC----CCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCchhHHH
Confidence 677876665578999999999999999877 5899999999999999999999999999999887532110000000
Q ss_pred cccccccccchhHHHH--HHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHH---
Q 013862 82 MPIPAELMSGQMTLTL--SYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKL--- 156 (435)
Q Consensus 82 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 156 (435)
.......... ..... .......... ..... ........+ . ............
T Consensus 147 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~-------~~~~~-~~~~~~~~~-~-------------~~~~~~~~~~~~~~~ 203 (286)
T PRK03204 147 FSRVMSSPPV-QYAILRRNFFVERLIPA-------GTEHR-PSSAVMAHY-R-------------AVQPNAAARRGVAEM 203 (286)
T ss_pred HHHHhccccc-hhhhhhhhHHHHHhccc-------cccCC-CCHHHHHHh-c-------------CCCCCHHHHHHHHHH
Confidence 0000000000 00000 0000000000 00000 000000000 0 000000000000
Q ss_pred -hhhhhhh---hhhhhhccc--ccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhh
Q 013862 157 -ELLKSAS---AYANARLDA--VKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKG 230 (435)
Q Consensus 157 -~~~~~~~---~~~~~~l~~--i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~ 230 (435)
..+.... ......+.. +++||++|+|++|.++++....+.+.+.+|++++++++++||++++|+|+++++.|.+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~~~~~ip~~~~~~i~~aGH~~~~e~Pe~~~~~i~~ 283 (286)
T PRK03204 204 PKQILAARPLLARLAREVPATLGTKPTLLVWGMKDVAFRPKTILPRLRATFPDHVLVELPNAKHFIQEDAPDRIAAAIIE 283 (286)
T ss_pred HHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCCcccCcHHHHHHHHHhcCCCeEEEcCCCcccccccCHHHHHHHHHH
Confidence 0000000 000111111 2899999999999988665357889999999999999999999999999999999999
Q ss_pred cccc
Q 013862 231 AGYY 234 (435)
Q Consensus 231 ~~Fl 234 (435)
|+
T Consensus 284 --~~ 285 (286)
T PRK03204 284 --RF 285 (286)
T ss_pred --hc
Confidence 76
|
|
| >TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.3e-20 Score=170.56 Aligned_cols=206 Identities=19% Similarity=0.199 Sum_probs=126.5
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
||.|..+ ...++++++++|+.+++++++. ++++|+||||||.+|+.+|.++|++|+++|++++............
T Consensus 62 ~G~S~~~-~~~~~~~~~~~~~~~~i~~l~~----~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 136 (276)
T TIGR02240 62 VGGSSTP-RHPYRFPGLAKLAARMLDYLDY----GQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPK 136 (276)
T ss_pred CCCCCCC-CCcCcHHHHHHHHHHHHHHhCc----CceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchh
Confidence 6788654 3568999999999999999987 4899999999999999999999999999999998854211110000
Q ss_pred cccccccccchhHHHHHHHHHhhcCChhHHHHHhhhhcc-chhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhh
Q 013862 82 MPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGL-FLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLK 160 (435)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (435)
. ...... ..... ...... ........... ............ . ..............
T Consensus 137 --~-~~~~~~-~~~~~----~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~----------~---~~~~~~~~~~~~~~ 193 (276)
T TIGR02240 137 --V-LMMMAS-PRRYI----QPSHGI--HIAPDIYGGAFRRDPELAMAHASK----------V---RSGGKLGYYWQLFA 193 (276)
T ss_pred --H-HHHhcC-chhhh----cccccc--chhhhhccceeeccchhhhhhhhh----------c---ccCCCchHHHHHHH
Confidence 0 000000 00000 000000 00000000000 000000000000 0 00000000000011
Q ss_pred hhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhccccccccc
Q 013862 161 SASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRRGRI 239 (435)
Q Consensus 161 ~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~~~~ 239 (435)
.......+.+.++++|+|+|+|++|.+++++ ..+.+.+.+++++++++++ ||+++.|+|+++++.|.+ |+.+..+
T Consensus 194 ~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~-~~~~l~~~~~~~~~~~i~~-gH~~~~e~p~~~~~~i~~--fl~~~~~ 268 (276)
T TIGR02240 194 GLGWTSIHWLHKIQQPTLVLAGDDDPIIPLI-NMRLLAWRIPNAELHIIDD-GHLFLITRAEAVAPIIMK--FLAEERQ 268 (276)
T ss_pred HcCCchhhHhhcCCCCEEEEEeCCCCcCCHH-HHHHHHHhCCCCEEEEEcC-CCchhhccHHHHHHHHHH--HHHHhhh
Confidence 0111113457889999999999999999998 7999999999999999985 999999999999999999 8875543
|
This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid. |
| >TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.5e-20 Score=169.59 Aligned_cols=206 Identities=19% Similarity=0.195 Sum_probs=121.3
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
||.|..+..+..+...+++|+.+++++++. ++++++||||||.+++.+|.++|++|+++|++++.......
T Consensus 71 ~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~----~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~----- 141 (282)
T TIGR03343 71 FNKSDAVVMDEQRGLVNARAVKGLMDALDI----EKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSL----- 141 (282)
T ss_pred CCCCCCCcCcccccchhHHHHHHHHHHcCC----CCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccc-----
Confidence 677765533322223578999999999987 58999999999999999999999999999999976321100
Q ss_pred cccccccccchhHHHHHHHHHhhcCChhHHHHHh-----hhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHH
Q 013862 82 MPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDS-----IVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKL 156 (435)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (435)
...... ..................... ................................
T Consensus 142 ----~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 205 (282)
T TIGR03343 142 ----FAPMPM---EGIKLLFKLYAEPSYETLKQMLNVFLFDQSLITEELLQGRWENIQRQPEHLKNFLISS--------- 205 (282)
T ss_pred ----cccCch---HHHHHHHHHhcCCCHHHHHHHHhhCccCcccCcHHHHHhHHHHhhcCHHHHHHHHHhc---------
Confidence 000000 000000000000000000000 00000001111000000000000000000000
Q ss_pred hhhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhccccc
Q 013862 157 ELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYR 235 (435)
Q Consensus 157 ~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~ 235 (435)
.............+.++++|+|+++|++|.+++++ ..+++.+.+|++++++++++||+++.|+|++|++.|.+ |++
T Consensus 206 ~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~-~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~i~~--fl~ 281 (282)
T TIGR03343 206 QKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLD-HGLKLLWNMPDAQLHVFSRCGHWAQWEHADAFNRLVID--FLR 281 (282)
T ss_pred cccccccchHHHHHhhCCCCEEEEEccCCCcCCch-hHHHHHHhCCCCEEEEeCCCCcCCcccCHHHHHHHHHH--Hhh
Confidence 00000011123567889999999999999999998 79999999999999999999999999999999999999 875
|
Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself. |
| >PRK00870 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.2e-20 Score=170.38 Aligned_cols=210 Identities=17% Similarity=0.173 Sum_probs=122.6
Q ss_pred CccccccCC-CCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccccccc
Q 013862 2 YGACIFQLQ-IGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQT 80 (435)
Q Consensus 2 yG~s~~p~~-~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~ 80 (435)
||.|..+.. ..|+++++++|+.+++++++. ++++|+||||||.+|+.+|.++|++|+++|++++...........
T Consensus 84 ~G~S~~~~~~~~~~~~~~a~~l~~~l~~l~~----~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 159 (302)
T PRK00870 84 FGRSDKPTRREDYTYARHVEWMRSWFEQLDL----TDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPD 159 (302)
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHHHHHcCC----CCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchH
Confidence 688865543 468999999999999999987 589999999999999999999999999999998753221110000
Q ss_pred ccccccccccch-hHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHh--hhcchhHHhccCCchhhhhHHh
Q 013862 81 IMPIPAELMSGQ-MTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVA--MSSYLPVLANILPKETLLWKLE 157 (435)
Q Consensus 81 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 157 (435)
.... +...... ............... ....+....+...... ................. .
T Consensus 160 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 222 (302)
T PRK00870 160 AFWA-WRAFSQYSPVLPVGRLVNGGTVR------------DLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPD----D 222 (302)
T ss_pred HHhh-hhcccccCchhhHHHHhhccccc------------cCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCC----C
Confidence 0000 0000000 000000000000000 0000000000000000 00000000000000000 0
Q ss_pred hhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCce---EEEeCCCCccccccCchhHHHHHhhcccc
Q 013862 158 LLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQ---TRRFGGGGHFLFLEDGVDLVTTIKGAGYY 234 (435)
Q Consensus 158 ~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~---~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl 234 (435)
............+.++++|+++|+|++|.+++.. . +.+.+.+++++ +++++++||++++|+|+++++.|.+ |+
T Consensus 223 ~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~-~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~--fl 298 (302)
T PRK00870 223 PAVAANRAAWAVLERWDKPFLTAFSDSDPITGGG-D-AILQKRIPGAAGQPHPTIKGAGHFLQEDSGEELAEAVLE--FI 298 (302)
T ss_pred cchHHHHHHHHhhhcCCCceEEEecCCCCcccCc-h-HHHHhhcccccccceeeecCCCccchhhChHHHHHHHHH--HH
Confidence 0000011112456789999999999999999986 4 88999999876 8899999999999999999999999 77
Q ss_pred cc
Q 013862 235 RR 236 (435)
Q Consensus 235 ~~ 236 (435)
++
T Consensus 299 ~~ 300 (302)
T PRK00870 299 RA 300 (302)
T ss_pred hc
Confidence 53
|
|
| >KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.3e-21 Score=173.67 Aligned_cols=216 Identities=19% Similarity=0.243 Sum_probs=125.0
Q ss_pred cccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEE---EecCCcccccccccc
Q 013862 4 ACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLI---LANPATSFRKSLLQT 80 (435)
Q Consensus 4 ~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lV---li~~~~~~~~~~~~~ 80 (435)
.|..|....|+..++++.+..+..+... ++++++|||+||++|+.+|+.+|+.|+++| ++++...........
T Consensus 100 ~s~~~~~~~y~~~~~v~~i~~~~~~~~~----~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~ 175 (326)
T KOG1454|consen 100 SSPLPRGPLYTLRELVELIRRFVKEVFV----EPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKG 175 (326)
T ss_pred CCCCCCCCceehhHHHHHHHHHHHhhcC----cceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhH
Confidence 6777777779999999999999998877 479999999999999999999999999999 554443222111100
Q ss_pred ccccccccccchhHHHHHHHHHhhcCChhH-HHH---Hhhhh-ccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhH
Q 013862 81 IMPIPAELMSGQMTLTLSYLLSLLTGDPLK-MAM---DSIVK-GLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWK 155 (435)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (435)
.... .............. ....+.. ... ..... .................. .......+.....
T Consensus 176 ~~~~-~~~~~~~~~~~~p~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 244 (326)
T KOG1454|consen 176 LRRL-LDKFLSALELLIPL----SLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRP------VKEHFHRDARLSL 244 (326)
T ss_pred HHHh-hhhhccHhhhcCcc----ccccchhheeHhhhcceeeeccccccchhhhhhheecc------cccchhhhheeeE
Confidence 0000 00000000000000 0000000 000 00000 000000000000000000 0000000000000
Q ss_pred Hhhhhhhhhhhhhhccccc-ceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhcccc
Q 013862 156 LELLKSASAYANARLDAVK-AQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYY 234 (435)
Q Consensus 156 ~~~~~~~~~~~~~~l~~i~-~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl 234 (435)
..............+.++. ||+|+++|++|.++|.+ .++.+.+.+|+++++++++|||.+|+|+|+++++.|.. |+
T Consensus 245 ~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~-~~~~~~~~~pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~--Fi 321 (326)
T KOG1454|consen 245 FLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLE-LAEELKKKLPNAELVEIPGAGHLPHLERPEEVAALLRS--FI 321 (326)
T ss_pred EEeccCccchHHHhhccccCCceEEEEcCcCCccCHH-HHHHHHhhCCCceEEEeCCCCcccccCCHHHHHHHHHH--HH
Confidence 0000000122234556676 99999999999999999 79999999999999999999999999999999999999 88
Q ss_pred ccc
Q 013862 235 RRG 237 (435)
Q Consensus 235 ~~~ 237 (435)
++.
T Consensus 322 ~~~ 324 (326)
T KOG1454|consen 322 ARL 324 (326)
T ss_pred HHh
Confidence 754
|
|
| >PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.4e-21 Score=194.84 Aligned_cols=122 Identities=18% Similarity=0.163 Sum_probs=106.4
Q ss_pred CcEEeccCCCCCCCCEEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcchHHHHHHhCCccccH
Q 013862 279 GKIVRGLSGIPSEGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRIMGSVPVSA 358 (435)
Q Consensus 279 ~~~~~~~~~~p~~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r 358 (435)
++++.|.||+|.+||+|+|+||+|+ +|.+++...+. +.+.+++|.++++.|| ++++++..|++|++|
T Consensus 15 ~~~v~g~~~~~~~~~~i~v~NH~s~-~D~~~l~~~~~----~~~~~~~k~~l~~~~~--------~~~~~~~~~~i~v~r 81 (718)
T PRK08043 15 RVRVTGDTQALKGERVLITPNHVSF-LDGILLALFLP----VRPVFAVYTSISQQWY--------MRWLKPYIDFVPLDP 81 (718)
T ss_pred EEEEEccccCCCCCCEEEEECCCch-HHHHHHHHhCC----CCeEEEEeHHHhhhHH--------HHHHHHhCCEEEecC
Confidence 6789999999999999999999997 57766665432 3477899999998876 888999999999998
Q ss_pred H------HHHHHhcCCCeEEEecCccccccccCCccceeecCCchhHHHHHHHcCCCEEEEEEecchh
Q 013862 359 I------NFYKLVSSKAHVLLYPGGVREAFHRKGEEYKLFWPESSEFVRVAAAFGGKIVPFGVVGEDD 420 (435)
Q Consensus 359 ~------~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~ivPv~~~g~~~ 420 (435)
+ ++.+.|++|..|+|||||||+ .+|+..+ ||+|++++|.++++|||||+|.|.+.
T Consensus 82 ~~~~~~~~~~~~l~~g~~~~iFPEGtr~---~~~~~~~----~k~G~~~~a~~~~~pivPv~i~g~~~ 142 (718)
T PRK08043 82 TKPMAIKHLVRLVEQGRPVVIFPEGRIT---VTGSLMK----IYDGAGFVAAKSGATVIPVRIEGAEL 142 (718)
T ss_pred CCHHHHHHHHHHHhCCCEEEEeCCCccC---CCCCccC----cchHHHHHHHHCCCCEEEEEEECCcc
Confidence 7 577889999999999999999 7776655 99999999999999999999999875
|
|
| >KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.9e-20 Score=161.54 Aligned_cols=218 Identities=17% Similarity=0.078 Sum_probs=117.8
Q ss_pred CccccccCCC---CCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccccc
Q 013862 2 YGACIFQLQI---GHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLL 78 (435)
Q Consensus 2 yG~s~~p~~~---~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~ 78 (435)
||+|+.|.-. ...-..+++-+++.-...++ ++.+|+||||||++|..||.+||++|+.|||++|.+.......
T Consensus 127 ~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~L----~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~ 202 (365)
T KOG4409|consen 127 FGRSSRPKFSIDPTTAEKEFVESIEQWRKKMGL----EKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDS 202 (365)
T ss_pred CCCCCCCCCCCCcccchHHHHHHHHHHHHHcCC----cceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCc
Confidence 7888888322 23455778888888888888 5999999999999999999999999999999999975442210
Q ss_pred -cc---ccccccccccchhHHHHHHHHHhhcCChhHHHHHhhh-------hccchhHHHHHhHHhHHhhhcchhHHhccC
Q 013862 79 -QT---IMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIV-------KGLFLQSTIQERSQDFVAMSSYLPVLANIL 147 (435)
Q Consensus 79 -~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (435)
.. ....|...+.......-+...-...+.........+. .....++.+.++........+ .
T Consensus 203 ~~~~~~~~~~w~~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~p--------s 274 (365)
T KOG4409|consen 203 EPEFTKPPPEWYKALFLVATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNP--------S 274 (365)
T ss_pred chhhcCCChHHHhhhhhhhhcCCHHHHHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCC--------c
Confidence 00 0000000000000000000000000000000000000 000011111111111000000 0
Q ss_pred CchhhhhHHhhhhhhhhhhhhhccccc--ceEEEEeeCCCCCCCChhHHHHHHhh--CCCceEEEeCCCCccccccCchh
Q 013862 148 PKETLLWKLELLKSASAYANARLDAVK--AQTLILCSGRDQLLPSEEEGDRLCRA--LPNCQTRRFGGGGHFLFLEDGVD 223 (435)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~l~~i~--~Pvlii~G~~D~~~~~~~~~~~~~~~--~~~~~~~~i~~~gH~~~~e~pe~ 223 (435)
....+........-.......++..++ ||+++|+|++|.+-... ..++.+. ...++.++++++||++++|+|+.
T Consensus 275 gE~~fk~l~~~~g~Ar~Pm~~r~~~l~~~~pv~fiyG~~dWmD~~~--g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~ 352 (365)
T KOG4409|consen 275 GETAFKNLFEPGGWARRPMIQRLRELKKDVPVTFIYGDRDWMDKNA--GLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEF 352 (365)
T ss_pred HHHHHHHHHhccchhhhhHHHHHHhhccCCCEEEEecCcccccchh--HHHHHHHhhcccceEEEecCCCceeecCCHHH
Confidence 000011111111111112233444444 99999999999876554 5555553 34579999999999999999999
Q ss_pred HHHHHhhccccc
Q 013862 224 LVTTIKGAGYYR 235 (435)
Q Consensus 224 ~~~~I~~~~Fl~ 235 (435)
|++.|.+ +++
T Consensus 353 Fn~~v~~--~~~ 362 (365)
T KOG4409|consen 353 FNQIVLE--ECD 362 (365)
T ss_pred HHHHHHH--HHh
Confidence 9999998 664
|
|
| >PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A | Back alignment and domain information |
|---|
Probab=99.83 E-value=9.3e-20 Score=159.66 Aligned_cols=191 Identities=23% Similarity=0.267 Sum_probs=121.5
Q ss_pred CccccccCC-CCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccccccc
Q 013862 2 YGACIFQLQ-IGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQT 80 (435)
Q Consensus 2 yG~s~~p~~-~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~ 80 (435)
+|.|..+.+ ..++++++++|+.+++++++. ++++++|||+||.+++.++.++|++|+++|++++.........
T Consensus 35 ~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~----~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~-- 108 (228)
T PF12697_consen 35 HGRSDPPPDYSPYSIEDYAEDLAELLDALGI----KKVILVGHSMGGMIALRLAARYPDRVKGLVLLSPPPPLPDSPS-- 108 (228)
T ss_dssp STTSSSHSSGSGGSHHHHHHHHHHHHHHTTT----SSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSSHHHHHC--
T ss_pred ccccccccccCCcchhhhhhhhhhccccccc----ccccccccccccccccccccccccccccceeeccccccccccc--
Confidence 566665553 468999999999999999988 5899999999999999999999999999999999864322110
Q ss_pred ccccccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhh
Q 013862 81 IMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLK 160 (435)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (435)
.......+..+.................... ........... ..........
T Consensus 109 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~------------------~~~~~~~~~~ 160 (228)
T PF12697_consen 109 ---------RSFGPSFIRRLLAWRSRSLRRLASRFFYRWF-DGDEPEDLIRS------------------SRRALAEYLR 160 (228)
T ss_dssp ---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-THHHHHHHHHH------------------HHHHHHHHHH
T ss_pred ---------ccccchhhhhhhhcccccccccccccccccc-ccccccccccc------------------cccccccccc
Confidence 0000001111110000000000000000000 00000011000 0001111111
Q ss_pred h--hhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHH
Q 013862 161 S--ASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTT 227 (435)
Q Consensus 161 ~--~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~ 227 (435)
. ........+..+++|+++++|++|.+++.+ ..+.+.+..+++++++++++||++++|+|+++++.
T Consensus 161 ~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 161 SNLWQADLSEALPRIKVPVLVIHGEDDPIVPPE-SAEELADKLPNAELVVIPGAGHFLFLEQPDEVAEA 228 (228)
T ss_dssp HHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHH-HHHHHHHHSTTEEEEEETTSSSTHHHHSHHHHHHH
T ss_pred cccccccccccccccCCCeEEeecCCCCCCCHH-HHHHHHHHCCCCEEEEECCCCCccHHHCHHHHhcC
Confidence 1 222334677788999999999999999977 78999999999999999999999999999999874
|
... |
| >PRK10349 carboxylesterase BioH; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.6e-19 Score=160.32 Aligned_cols=200 Identities=16% Similarity=0.156 Sum_probs=116.9
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
||.|..+ +.++++++++++.+ +.. ++++|+||||||.+|+.+|.++|++|+++|++++.+.......
T Consensus 50 ~G~S~~~--~~~~~~~~~~~l~~----~~~----~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~--- 116 (256)
T PRK10349 50 FGRSRGF--GALSLADMAEAVLQ----QAP----DKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDE--- 116 (256)
T ss_pred CCCCCCC--CCCCHHHHHHHHHh----cCC----CCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCC---
Confidence 5777533 35788888877664 333 5899999999999999999999999999999998643321110
Q ss_pred cccccccccchhHHHHHHHHHhhcCChhHHHHHhhh----hccchhHHHHHhHHhHHhhhcchhHHhccCCc-hhhhhHH
Q 013862 82 MPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIV----KGLFLQSTIQERSQDFVAMSSYLPVLANILPK-ETLLWKL 156 (435)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 156 (435)
....... ....+................. .................. ..... .......
T Consensus 117 ----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~ 180 (256)
T PRK10349 117 ----WPGIKPD---VLAGFQQQLSDDFQRTVERFLALQTMGTETARQDARALKKTVLA---------LPMPEVDVLNGGL 180 (256)
T ss_pred ----CCcccHH---HHHHHHHHHHhchHHHHHHHHHHHHccCchHHHHHHHHHHHhhc---------cCCCcHHHHHHHH
Confidence 0000000 0000000000000000000000 000000000000000000 00000 0011111
Q ss_pred hhhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhccccc
Q 013862 157 ELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYR 235 (435)
Q Consensus 157 ~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~ 235 (435)
..+. ..+..+.+.++++|+|+|+|++|.++|.+ ..+.+.+.+++++++++++|||++++|+|++|++.|.+ |-+
T Consensus 181 ~~~~--~~~~~~~l~~i~~P~lii~G~~D~~~~~~-~~~~~~~~i~~~~~~~i~~~gH~~~~e~p~~f~~~l~~--~~~ 254 (256)
T PRK10349 181 EILK--TVDLRQPLQNVSMPFLRLYGYLDGLVPRK-VVPMLDKLWPHSESYIFAKAAHAPFISHPAEFCHLLVA--LKQ 254 (256)
T ss_pred HHHH--hCccHHHHhhcCCCeEEEecCCCccCCHH-HHHHHHHhCCCCeEEEeCCCCCCccccCHHHHHHHHHH--Hhc
Confidence 1111 11234677889999999999999999988 78999999999999999999999999999999999998 643
|
|
| >cd07991 LPLAT_LPCAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.7e-21 Score=163.67 Aligned_cols=117 Identities=15% Similarity=0.179 Sum_probs=96.1
Q ss_pred CCCcEEeccCCCCCCCCEEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcchHHHHHHhCCccc
Q 013862 277 PDGKIVRGLSGIPSEGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRIMGSVPV 356 (435)
Q Consensus 277 ~~~~~~~~~~~~p~~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 356 (435)
..+++++|.|++| ++++|+||||+|+ +|.+++... .+..+++|.++++.|+ +++++...|++++
T Consensus 10 ~~~~~v~g~~~~p-~~~~iiv~NH~S~-~D~~~l~~~------~~~~fv~k~el~~~p~--------~g~~~~~~g~i~v 73 (211)
T cd07991 10 FYVIKVHGKPDPP-EAPRIIVANHTSF-IDPLILFSD------LFPSIVAKKELGKLPF--------IGTILRALGCIFV 73 (211)
T ss_pred EEEEEEECCCCCC-CCCeEEEECCCcH-HHHHHHhhh------cCcEEEEehhhccCcH--------HHHHHHhCCceEE
Confidence 4578999999999 7899999999997 577666554 3378999999998866 8899999999999
Q ss_pred cHH----------HHHHHhc--CCCeEEEecCccccccccCCccceeecCCchhHHHHHHHcCCCEEEEEEecchh
Q 013862 357 SAI----------NFYKLVS--SKAHVLLYPGGVREAFHRKGEEYKLFWPESSEFVRVAAAFGGKIVPFGVVGEDD 420 (435)
Q Consensus 357 ~r~----------~~~~~l~--~g~~~~ifPeG~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~ivPv~~~g~~~ 420 (435)
+|+ .+.+.++ +|.+|+|||||||+ .++...+ ||+|++ ++++||+||++.|...
T Consensus 74 ~R~~~~~~~~~~~~~~~~~~~~~g~~v~iFPEGtrs---~~~~l~~----Fk~gaf----~~~~pI~Pv~i~~~~~ 138 (211)
T cd07991 74 DRSEPKDRKKVVEEIKERATDPNWPPILIFPEGTTT---NGKALIM----FKKGAF----EPGVPVQPVAIRYPNK 138 (211)
T ss_pred eCCCchhHHHHHHHHHHHHhCCCCCeEEEecCcccc---CCCEEEe----eccccc----cCCCeeEEEEEEecCc
Confidence 985 3445566 47999999999999 5554444 999976 4899999999998765
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as lysophosphatidylcholine acyltransferase 1 (LPCAT-1), glycerol-3-phosphate acyltransferase 3 (GPAT3), and similar sequences. |
| >PLN02578 hydrolase | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.7e-19 Score=167.38 Aligned_cols=218 Identities=15% Similarity=0.151 Sum_probs=124.6
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
||.|..+. ..|+.+++++|+.++++++.. ++++++||||||.+++.+|.++|++|+++|++++.+..........
T Consensus 123 ~G~S~~~~-~~~~~~~~a~~l~~~i~~~~~----~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~ 197 (354)
T PLN02578 123 FGWSDKAL-IEYDAMVWRDQVADFVKEVVK----EPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKE 197 (354)
T ss_pred CCCCCCcc-cccCHHHHHHHHHHHHHHhcc----CCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccc
Confidence 56666543 468999999999999999876 5899999999999999999999999999999998754332211000
Q ss_pred ccc--ccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHH-h---hhcc-hhHHhc-cCCchhhh
Q 013862 82 MPI--PAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFV-A---MSSY-LPVLAN-ILPKETLL 153 (435)
Q Consensus 82 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~-~~~~~~-~~~~~~~~ 153 (435)
... ......................... ...... ....+....... . ..++ .+.... ........
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (354)
T PLN02578 198 EAIVVEETVLTRFVVKPLKEWFQRVVLGFL------FWQAKQ-PSRIESVLKSVYKDKSNVDDYLVESITEPAADPNAGE 270 (354)
T ss_pred cccccccchhhHHHhHHHHHHHHHHHHHHH------HHHhcC-HHHHHHHHHHhcCCcccCCHHHHHHHHhcccCCchHH
Confidence 000 0000000000000000000000000 000000 000000000000 0 0000 000000 00000000
Q ss_pred hHHhhhhh-----hhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHH
Q 013862 154 WKLELLKS-----ASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTI 228 (435)
Q Consensus 154 ~~~~~~~~-----~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I 228 (435)
.....+.. ......+.+.++++|+++|+|++|.+++.+ ..+.+.+.+|+++++++ ++||+++.|+|+++++.|
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~v~~~-~~~~l~~~~p~a~l~~i-~~GH~~~~e~p~~~~~~I 348 (354)
T PLN02578 271 VYYRLMSRFLFNQSRYTLDSLLSKLSCPLLLLWGDLDPWVGPA-KAEKIKAFYPDTTLVNL-QAGHCPHDEVPEQVNKAL 348 (354)
T ss_pred HHHHHHHHHhcCCCCCCHHHHhhcCCCCEEEEEeCCCCCCCHH-HHHHHHHhCCCCEEEEe-CCCCCccccCHHHHHHHH
Confidence 00111100 011224567889999999999999999998 79999999999999999 589999999999999999
Q ss_pred hhccccc
Q 013862 229 KGAGYYR 235 (435)
Q Consensus 229 ~~~~Fl~ 235 (435)
.+ |+.
T Consensus 349 ~~--fl~ 353 (354)
T PLN02578 349 LE--WLS 353 (354)
T ss_pred HH--HHh
Confidence 99 764
|
|
| >TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.8e-19 Score=163.47 Aligned_cols=211 Identities=17% Similarity=0.165 Sum_probs=124.0
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
+|.|..+....++++++++|+.+++++++. ++++|+||||||.+++.+|.++|++++++|++++............
T Consensus 65 ~G~S~~~~~~~~~~~~~~~~l~~~i~~~~~----~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~ 140 (278)
T TIGR03056 65 HGFTRAPFRFRFTLPSMAEDLSALCAAEGL----SPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTL 140 (278)
T ss_pred CCCCCCccccCCCHHHHHHHHHHHHHHcCC----CCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccc
Confidence 677776665579999999999999999876 4899999999999999999999999999999987643211100000
Q ss_pred cccccccccchhHHHHHHHHHhhcCChhHHHHHhhhhc-cchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhh
Q 013862 82 MPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKG-LFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLK 160 (435)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (435)
... ........ ............... ......... ..........+..... ...........+.
T Consensus 141 ~~~-~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~ 205 (278)
T TIGR03056 141 FPY-MARVLACN-PFTPPMMSRGAADQQ-RVERLIRDTGSLLDKAGMTYYGRLIR------------SPAHVDGALSMMA 205 (278)
T ss_pred cch-hhHhhhhc-ccchHHHHhhcccCc-chhHHhhccccccccchhhHHHHhhc------------CchhhhHHHHHhh
Confidence 000 00000000 000000000000000 000000000 0000000000000000 0000000000000
Q ss_pred hh-hhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhcccc
Q 013862 161 SA-SAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYY 234 (435)
Q Consensus 161 ~~-~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl 234 (435)
.. .......+.++++|+++|+|++|..+|.+ ..+.+.+.+++++++.++++||+++.|+|+++++.|.+ |+
T Consensus 206 ~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~~-~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~--f~ 277 (278)
T TIGR03056 206 QWDLAPLNRDLPRITIPLHLIAGEEDKAVPPD-ESKRAATRVPTATLHVVPGGGHLVHEEQADGVVGLILQ--AA 277 (278)
T ss_pred cccccchhhhcccCCCCEEEEEeCCCcccCHH-HHHHHHHhccCCeEEEECCCCCcccccCHHHHHHHHHH--Hh
Confidence 00 00112456788999999999999999998 78999999999999999999999999999999999999 65
|
Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity. |
| >PRK07581 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.4e-19 Score=167.17 Aligned_cols=68 Identities=19% Similarity=0.302 Sum_probs=62.3
Q ss_pred hhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCC-CCccccccCchhHHHHHhhcccccc
Q 013862 166 ANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGG-GGHFLFLEDGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 166 ~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~-~gH~~~~e~pe~~~~~I~~~~Fl~~ 236 (435)
..+.+.++++|||+|+|++|..+++. ..+.+.+.+|+++++++++ +||++++|+|++++..|.+ |+++
T Consensus 267 ~~~~L~~I~~PtLvI~G~~D~~~p~~-~~~~l~~~ip~a~l~~i~~~~GH~~~~~~~~~~~~~~~~--~~~~ 335 (339)
T PRK07581 267 LAAALGSITAKTFVMPISTDLYFPPE-DCEAEAALIPNAELRPIESIWGHLAGFGQNPADIAFIDA--ALKE 335 (339)
T ss_pred HHHHHhcCCCCEEEEEeCCCCCCCHH-HHHHHHHhCCCCeEEEeCCCCCccccccCcHHHHHHHHH--HHHH
Confidence 34677889999999999999999998 6889999999999999998 9999999999999999999 8764
|
|
| >PRK10673 acyl-CoA esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.9e-19 Score=158.55 Aligned_cols=198 Identities=14% Similarity=0.141 Sum_probs=121.2
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
+|.|..+ ..++++++++|+.+++++++. ++++|+||||||.+++.+|.++|++|+++|++++.+......
T Consensus 53 ~G~s~~~--~~~~~~~~~~d~~~~l~~l~~----~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~---- 122 (255)
T PRK10673 53 HGLSPRD--PVMNYPAMAQDLLDTLDALQI----EKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVR---- 122 (255)
T ss_pred CCCCCCC--CCCCHHHHHHHHHHHHHHcCC----CceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccch----
Confidence 4555432 458999999999999999877 479999999999999999999999999999998653211000
Q ss_pred cccccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhh----hhHHh
Q 013862 82 MPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETL----LWKLE 157 (435)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 157 (435)
.. .................... ............... .. ....+..... .....
T Consensus 123 ------~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~-------------~~~~~~~~~~~~~~~~~~~ 180 (255)
T PRK10673 123 ------RH-DEIFAAINAVSEAGATTRQQ-AAAIMRQHLNEEGVI-QF-------------LLKSFVDGEWRFNVPVLWD 180 (255)
T ss_pred ------hh-HHHHHHHHHhhhcccccHHH-HHHHHHHhcCCHHHH-HH-------------HHhcCCcceeEeeHHHHHH
Confidence 00 00000000000000000000 000000000000000 00 0000000000 00000
Q ss_pred hhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhcccccc
Q 013862 158 LLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 158 ~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~ 236 (435)
.+.. ....+.+..+++|+|+|+|++|..++.+ ..+.+.+.++++++++++++||++++|+|+++++.|.+ |+..
T Consensus 181 ~~~~--~~~~~~~~~~~~P~l~i~G~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~l~~--fl~~ 254 (255)
T PRK10673 181 QYPH--IVGWEKIPAWPHPALFIRGGNSPYVTEA-YRDDLLAQFPQARAHVIAGAGHWVHAEKPDAVLRAIRR--YLND 254 (255)
T ss_pred hHHH--HhCCcccCCCCCCeEEEECCCCCCCCHH-HHHHHHHhCCCcEEEEeCCCCCeeeccCHHHHHHHHHH--HHhc
Confidence 0000 0112346678999999999999999988 79999999999999999999999999999999999999 8764
|
|
| >PLN02385 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.2e-19 Score=164.92 Aligned_cols=212 Identities=16% Similarity=0.172 Sum_probs=124.2
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhc--CCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCR--SSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQ 79 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~--~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~ 79 (435)
+|.|..+....++++++++|+.++++.+... .++.+++|+||||||.+|+.++.++|++++++|+++|.........
T Consensus 126 ~G~S~~~~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~- 204 (349)
T PLN02385 126 FGLSEGLHGYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVV- 204 (349)
T ss_pred CCCCCCCCCCcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEeccccccccccc-
Confidence 5666544333468999999999999988652 2335799999999999999999999999999999998754221100
Q ss_pred cccccccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhh
Q 013862 80 TIMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELL 159 (435)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (435)
. ............. ....................... ...... . . ...............+
T Consensus 205 -------~--~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~-~--~--~~~~~~~~~~~~~~~l 265 (349)
T PLN02385 205 -------P--PPLVLQILILLAN-LLPKAKLVPQKDLAELAFRDLKK----RKMAEY-N--V--IAYKDKPRLRTAVELL 265 (349)
T ss_pred -------C--chHHHHHHHHHHH-HCCCceecCCCccccccccCHHH----HHHhhc-C--c--ceeCCCcchHHHHHHH
Confidence 0 0000001111100 00000000000000000000000 000000 0 0 0000011111112222
Q ss_pred hhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhC--CCceEEEeCCCCccccccCchh----HHHHHhhccc
Q 013862 160 KSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRAL--PNCQTRRFGGGGHFLFLEDGVD----LVTTIKGAGY 233 (435)
Q Consensus 160 ~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~pe~----~~~~I~~~~F 233 (435)
... ......+.++++|+|+|+|++|.++++. ..+.+.+.+ ++.++++++++||+++.|+|++ +.+.|.+ |
T Consensus 266 ~~~-~~~~~~l~~i~~P~Lii~G~~D~vv~~~-~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~--w 341 (349)
T PLN02385 266 RTT-QEIEMQLEEVSLPLLILHGEADKVTDPS-VSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIIS--W 341 (349)
T ss_pred HHH-HHHHHhcccCCCCEEEEEeCCCCccChH-HHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHH--H
Confidence 221 1234567889999999999999999998 688888877 5689999999999999999987 7777777 7
Q ss_pred cccc
Q 013862 234 YRRG 237 (435)
Q Consensus 234 l~~~ 237 (435)
+...
T Consensus 342 L~~~ 345 (349)
T PLN02385 342 LDSH 345 (349)
T ss_pred HHHh
Confidence 6543
|
|
| >PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.5e-20 Score=199.57 Aligned_cols=124 Identities=21% Similarity=0.281 Sum_probs=107.0
Q ss_pred CCcEEeccCCCCCCCCEEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcchHHHHHHhCCcccc
Q 013862 278 DGKIVRGLSGIPSEGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRIMGSVPVS 357 (435)
Q Consensus 278 ~~~~~~~~~~~p~~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 357 (435)
.+++++|.|++|.++|+|+++||+|+ +|.+++...+ ++++++++|+++++.|+ ++++++..|++|+|
T Consensus 427 ~~~~v~g~e~lp~~~~~i~~~nH~s~-~D~~~~~~~~----~~~~~~~~~~~~~~~~~--------~~~~~~~~~~i~v~ 493 (1146)
T PRK08633 427 YRLRVEGRENIPAKGGALLLGNHVSW-IDWALLQAAS----PRPIRFVMERSIYEKWY--------LKWFFKLFGVIPIS 493 (1146)
T ss_pred EEEEEECCcCCCCCCCEEEEECCCch-HHHHHHHHHc----CCCeEEEeeHHhhhChh--------HHHHHHHCCEEEec
Confidence 46789999999999999999999997 5765555443 34588999999998865 89999999999999
Q ss_pred HH-------HHHHHhcCCCeEEEecCccccccccCCccceeecCCchhHHHHHHHcCCCEEEEEEecchhh
Q 013862 358 AI-------NFYKLVSSKAHVLLYPGGVREAFHRKGEEYKLFWPESSEFVRVAAAFGGKIVPFGVVGEDDL 421 (435)
Q Consensus 358 r~-------~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~ivPv~~~g~~~~ 421 (435)
|+ .+.+.|++|++|+|||||||+ .+++..+ ||+|++++|+++++|||||++.|....
T Consensus 494 r~~~~~~~~~~~~~l~~g~~~~ifPeGt~~---~~~~~~~----~~~g~~~~a~~~~~~i~pv~~~g~~~~ 557 (1146)
T PRK08633 494 SGGSKESLEFIRKALDDGEVVCIFPEGAIT---RNGQLNE----FKRGFELIVKGTDVPIIPFYIRGLWGS 557 (1146)
T ss_pred CCChHHHHHHHHHHHhCCCEEEEECCcCCC---CCCCccc----hhHHHHHHHHHCCCCEEEEEEeccccc
Confidence 84 667899999999999999999 7776655 999999999999999999999997554
|
|
| >PRK06765 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.4e-19 Score=165.06 Aligned_cols=211 Identities=13% Similarity=0.100 Sum_probs=125.0
Q ss_pred CCChHHHHHHHHHHHHHhhhcCCCCCEE-EEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccc-ccccccc--ccc
Q 013862 12 GHHFTGLLKLIERTIRSENCRSSNRPVY-LVGESLGACLALAVAARNPDMDLVLILANPATSFRKSL-LQTIMPI--PAE 87 (435)
Q Consensus 12 ~~s~~~~a~dl~~~l~~l~~~~~~~~~~-lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~-~~~~~~~--~~~ 87 (435)
.+|++++++++.++++++++ ++++ ++||||||++|+.+|.++|++|+++|++++........ ....... .+.
T Consensus 140 ~~t~~d~~~~~~~ll~~lgi----~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~~~~~~~~~~~~~~~~ai~ 215 (389)
T PRK06765 140 VVTILDFVRVQKELIKSLGI----ARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQNDAWTSVNVLQNWAEAIR 215 (389)
T ss_pred cCcHHHHHHHHHHHHHHcCC----CCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCCCChhHHHHHHHHHHHHHH
Confidence 38999999999999999998 4675 99999999999999999999999999998775432211 0000000 000
Q ss_pred cc----------cchhH---HHHHHHHHhhcCChhHHHHHhhhhcc--c--------hhHHHHHhHHhHHhhhcchhHHh
Q 013862 88 LM----------SGQMT---LTLSYLLSLLTGDPLKMAMDSIVKGL--F--------LQSTIQERSQDFVAMSSYLPVLA 144 (435)
Q Consensus 88 ~~----------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~--~--------~~~~~~~~~~~~~~~~~~~~~~~ 144 (435)
.- ..... .................. ..+.... . .....+.+..... +.+.
T Consensus 216 ~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~-~~f~r~~~~~~~~~~~~~~~~~~e~yl~~~~------~~~~ 288 (389)
T PRK06765 216 LDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYE-TTFPRNASIEVDPYEKVSTLTSFEKEINKAT------YRRA 288 (389)
T ss_pred hCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHH-HHcCcCccccccccccccchhhHHHHHHHHH------HHhh
Confidence 00 00000 011111111111111000 0000000 0 0000111111110 0111
Q ss_pred ccCCchhhhhHHhhhhhhh-----hhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCC----CceEEEeCC-CCc
Q 013862 145 NILPKETLLWKLELLKSAS-----AYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALP----NCQTRRFGG-GGH 214 (435)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~----~~~~~~i~~-~gH 214 (435)
.......+......+.... .+..+.+.++++|+|+|+|++|.++|++ ..+.+.+.++ +++++++++ +||
T Consensus 289 ~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~-~~~~la~~lp~~~~~a~l~~I~s~~GH 367 (389)
T PRK06765 289 ELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPR-YNYKMVDILQKQGKYAEVYEIESINGH 367 (389)
T ss_pred hccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHH-HHHHHHHHhhhcCCCeEEEEECCCCCc
Confidence 2222223322222222111 1345678899999999999999999998 6888888886 689999985 999
Q ss_pred cccccCchhHHHHHhhcccccc
Q 013862 215 FLFLEDGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 215 ~~~~e~pe~~~~~I~~~~Fl~~ 236 (435)
..++|+|+++++.|.+ |+++
T Consensus 368 ~~~le~p~~~~~~I~~--FL~~ 387 (389)
T PRK06765 368 MAGVFDIHLFEKKIYE--FLNR 387 (389)
T ss_pred chhhcCHHHHHHHHHH--HHcc
Confidence 9999999999999999 8865
|
|
| >PRK06489 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.6e-19 Score=166.34 Aligned_cols=213 Identities=11% Similarity=0.101 Sum_probs=120.9
Q ss_pred CccccccCCC------CCChHHHHHHHHHHH-HHhhhcCCCCCEE-EEEeChhHHHHHHHHHhCCCceeEEEEecCCccc
Q 013862 2 YGACIFQLQI------GHHFTGLLKLIERTI-RSENCRSSNRPVY-LVGESLGACLALAVAARNPDMDLVLILANPATSF 73 (435)
Q Consensus 2 yG~s~~p~~~------~~s~~~~a~dl~~~l-~~l~~~~~~~~~~-lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~ 73 (435)
+|.|..+.+. .|+++++++++.+++ +++++ ++++ |+||||||++|+.+|.++|++|+++|++++....
T Consensus 116 hG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~~lgi----~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~ 191 (360)
T PRK06489 116 HGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTEGLGV----KHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTE 191 (360)
T ss_pred CCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHHhcCC----CceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCccc
Confidence 5777655432 589999999988855 88887 4675 8999999999999999999999999999876321
Q ss_pred cc-ccc--ccc-ccccccc-------ccchhHHHHHHHH---HhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcc
Q 013862 74 RK-SLL--QTI-MPIPAEL-------MSGQMTLTLSYLL---SLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSY 139 (435)
Q Consensus 74 ~~-~~~--~~~-~~~~~~~-------~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (435)
.. ... ... ... ... ............. ........ . .....................
T Consensus 192 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~---- 262 (360)
T PRK06489 192 MSGRNWMWRRMLIES-IRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGT-L---AYQAQAPTRAAADKLVDERLA---- 262 (360)
T ss_pred ccHHHHHHHHHHHHH-HHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCH-H---HHHHhcCChHHHHHHHHHHHH----
Confidence 10 000 000 000 000 0000000000000 00000000 0 000000000000000000000
Q ss_pred hhHHhccCCchhhhhHHhhhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHH--HHHHhhCCCceEEEeCCC----C
Q 013862 140 LPVLANILPKETLLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEG--DRLCRALPNCQTRRFGGG----G 213 (435)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~--~~~~~~~~~~~~~~i~~~----g 213 (435)
... ......+....... ...+..+.+.+|++|+|+|+|++|.++|++ .. +.+++.+|+++++++++| |
T Consensus 263 --~~~-~~~~~~~~~~~~~~--~~~d~~~~L~~I~~PvLvI~G~~D~~~p~~-~~~~~~la~~ip~a~l~~i~~a~~~~G 336 (360)
T PRK06489 263 --APV-TADANDFLYQWDSS--RDYNPSPDLEKIKAPVLAINSADDERNPPE-TGVMEAALKRVKHGRLVLIPASPETRG 336 (360)
T ss_pred --hhh-hcCHHHHHHHHHHh--hccChHHHHHhCCCCEEEEecCCCcccChh-hHHHHHHHHhCcCCeEEEECCCCCCCC
Confidence 000 00011111111110 111234678899999999999999999988 45 789999999999999996 9
Q ss_pred ccccccCchhHHHHHhhcccccc
Q 013862 214 HFLFLEDGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 214 H~~~~e~pe~~~~~I~~~~Fl~~ 236 (435)
|.++ |+|++|++.|.+ |+..
T Consensus 337 H~~~-e~P~~~~~~i~~--FL~~ 356 (360)
T PRK06489 337 HGTT-GSAKFWKAYLAE--FLAQ 356 (360)
T ss_pred cccc-cCHHHHHHHHHH--HHHh
Confidence 9997 899999999999 8864
|
|
| >PRK08775 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.9e-19 Score=166.58 Aligned_cols=209 Identities=17% Similarity=0.145 Sum_probs=117.9
Q ss_pred CCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccc--ccccccccccc
Q 013862 11 IGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSL--LQTIMPIPAEL 88 (435)
Q Consensus 11 ~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~--~~~~~~~~~~~ 88 (435)
..++++++++|+.++++++++. +.++|+||||||++|+.+|.++|++|+++|++++........ +...... ...
T Consensus 116 ~~~~~~~~a~dl~~ll~~l~l~---~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~~~~~~~~~~~-~~~ 191 (343)
T PRK08775 116 VPIDTADQADAIALLLDALGIA---RLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPYAAAWRALQRR-AVA 191 (343)
T ss_pred CCCCHHHHHHHHHHHHHHcCCC---cceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHHHHHHHHHHHH-HHH
Confidence 3578999999999999999883 345899999999999999999999999999999874321100 0000000 000
Q ss_pred cc------chhHHHHHHHHHhhcCChhHHHHHhhhhccc--h---hHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHh
Q 013862 89 MS------GQMTLTLSYLLSLLTGDPLKMAMDSIVKGLF--L---QSTIQERSQDFVAMSSYLPVLANILPKETLLWKLE 157 (435)
Q Consensus 89 ~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (435)
.. ..................... ...+..... . ......+..... ...........+. .
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~------~~~~~~~~~~~~~---~ 261 (343)
T PRK08775 192 LGQLQCAEKHGLALARQLAMLSYRTPEEF-EERFDAPPEVINGRVRVAAEDYLDAAG------AQYVARTPVNAYL---R 261 (343)
T ss_pred cCCCCCCchhHHHHHHHHHHHHcCCHHHH-HHHhCCCccccCCCccchHHHHHHHHH------HHHHHhcChhHHH---H
Confidence 00 000000000000000000000 000000000 0 000000000000 0000001111110 0
Q ss_pred hhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhC-CCceEEEeCC-CCccccccCchhHHHHHhhccccc
Q 013862 158 LLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRAL-PNCQTRRFGG-GGHFLFLEDGVDLVTTIKGAGYYR 235 (435)
Q Consensus 158 ~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~i~~-~gH~~~~e~pe~~~~~I~~~~Fl~ 235 (435)
..... ......+.++++|+|+|+|++|.++|+. ..+.+.+.+ ++++++++++ +||++++|+|++|++.|.+ |+.
T Consensus 262 ~~~~~-~~~~~~l~~I~~PtLvi~G~~D~~~p~~-~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~--FL~ 337 (343)
T PRK08775 262 LSESI-DLHRVDPEAIRVPTVVVAVEGDRLVPLA-DLVELAEGLGPRGSLRVLRSPYGHDAFLKETDRIDAILTT--ALR 337 (343)
T ss_pred HHHHH-hhcCCChhcCCCCeEEEEeCCCEeeCHH-HHHHHHHHcCCCCeEEEEeCCccHHHHhcCHHHHHHHHHH--HHH
Confidence 01000 0012346789999999999999999988 688888877 7999999985 9999999999999999999 886
Q ss_pred cc
Q 013862 236 RG 237 (435)
Q Consensus 236 ~~ 237 (435)
+.
T Consensus 338 ~~ 339 (343)
T PRK08775 338 ST 339 (343)
T ss_pred hc
Confidence 43
|
|
| >TIGR03611 RutD pyrimidine utilization protein D | Back alignment and domain information |
|---|
Probab=99.81 E-value=3e-19 Score=159.92 Aligned_cols=207 Identities=23% Similarity=0.273 Sum_probs=125.5
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
||.|..+....++++++++|+.+++++++. ++++++||||||.+|+.+|.++|++|+++|++++.........
T Consensus 50 ~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~----~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~--- 122 (257)
T TIGR03611 50 TGRSPGELPPGYSIAHMADDVLQLLDALNI----ERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTR--- 122 (257)
T ss_pred CCCCCCCCcccCCHHHHHHHHHHHHHHhCC----CcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHH---
Confidence 677776666779999999999999999877 4899999999999999999999999999999987643211000
Q ss_pred cccccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhh
Q 013862 82 MPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKS 161 (435)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (435)
...... ..+................ ................. ....................+.
T Consensus 123 ---------~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~- 186 (257)
T TIGR03611 123 ---------RCFDVR-IALLQHAGPEAYVHAQALF---LYPADWISENAARLAAD--EAHALAHFPGKANVLRRINALE- 186 (257)
T ss_pred ---------HHHHHH-HHHHhccCcchhhhhhhhh---hccccHhhccchhhhhh--hhhcccccCccHHHHHHHHHHH-
Confidence 000000 0000000000000000000 00000000000000000 0000000000011111111111
Q ss_pred hhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhccccc
Q 013862 162 ASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYR 235 (435)
Q Consensus 162 ~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~ 235 (435)
..+....+.++++|+++++|++|.+++.+ ..+.+.+.+++++++.++++||++++|+|+++++.|.+ |+.
T Consensus 187 -~~~~~~~~~~i~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~--fl~ 256 (257)
T TIGR03611 187 -AFDVSARLDRIQHPVLLIANRDDMLVPYT-QSLRLAAALPNAQLKLLPYGGHASNVTDPETFNRALLD--FLK 256 (257)
T ss_pred -cCCcHHHhcccCccEEEEecCcCcccCHH-HHHHHHHhcCCceEEEECCCCCCccccCHHHHHHHHHH--Hhc
Confidence 11123567788999999999999999998 68899999999999999999999999999999999999 774
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. |
| >PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.81 E-value=9.1e-19 Score=154.08 Aligned_cols=211 Identities=23% Similarity=0.287 Sum_probs=123.3
Q ss_pred Cccccc---cCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccccc
Q 013862 2 YGACIF---QLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLL 78 (435)
Q Consensus 2 yG~s~~---p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~ 78 (435)
+|.|.. .....++.+++++++..++++++. ++++++||||||.+++.+|+++|++|+++|++++.........
T Consensus 11 ~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 86 (230)
T PF00561_consen 11 FGYSSPHWDPDFPDYTTDDLAADLEALREALGI----KKINLVGHSMGGMLALEYAAQYPERVKKLVLISPPPDLPDGLW 86 (230)
T ss_dssp STTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTT----SSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSHHHHHHH
T ss_pred CCCCCCCccCCcccccHHHHHHHHHHHHHHhCC----CCeEEEEECCChHHHHHHHHHCchhhcCcEEEeeeccchhhhh
Confidence 566763 456789999999999999999999 4799999999999999999999999999999998620000000
Q ss_pred ccccccccccccchhHHHH-HHHHHhhcCChhHHHHHhhh--hccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhH
Q 013862 79 QTIMPIPAELMSGQMTLTL-SYLLSLLTGDPLKMAMDSIV--KGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWK 155 (435)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (435)
.. . ... ....... ........ ........... ................. ................
T Consensus 87 ~~---~-~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 154 (230)
T PF00561_consen 87 NR---I-WPR--GNLQGQLLDNFFNFLS-DPIKPLLGRWPKQFFAYDREFVEDFLKQFQ-----SQQYARFAETDAFDNM 154 (230)
T ss_dssp HH---C-HHH--HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTHHHHHH-----HHHHHHTCHHHHHHHH
T ss_pred HH---H-Hhh--hhhhhhHHHhhhcccc-ccchhhhhhhhhheeeccCccccchhhccc-----hhhhhHHHHHHHHhhh
Confidence 00 0 000 0000000 00000000 00000000000 00000000000000000 0000000000000000
Q ss_pred Hh--hhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHh
Q 013862 156 LE--LLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIK 229 (435)
Q Consensus 156 ~~--~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~ 229 (435)
.. ............+..+++|+++++|++|.++|++ ....+.+.+|+.++++++++||+.++++|+++++.|.
T Consensus 155 ~~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~-~~~~~~~~~~~~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 155 FWNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPE-SSEQLAKLIPNSQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHH-HHHHHHHHSTTEEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred ccccccccccccccccccccCCCeEEEEeCCCCCCCHH-HHHHHHHhcCCCEEEECCCCChHHHhcCHHhhhhhhc
Confidence 00 1111112234567789999999999999999999 7888999999999999999999999999999999886
|
; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A .... |
| >PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=7.1e-20 Score=197.46 Aligned_cols=124 Identities=16% Similarity=0.185 Sum_probs=108.4
Q ss_pred CCcEEeccCCCCCCC-CEEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcchHHHHHHhCCccc
Q 013862 278 DGKIVRGLSGIPSEG-PVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRIMGSVPV 356 (435)
Q Consensus 278 ~~~~~~~~~~~p~~~-~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 356 (435)
.+++++|.||+|+++ ++|+++||+|+ +|.+++...+ ++++++++|+++++.|+ ++.+++..|++|+
T Consensus 439 ~~~~~~g~~~~~~~~~~~i~~~nH~s~-~D~~~l~~~~----~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~i 505 (1140)
T PRK06814 439 YRVEVKGLENLQKAGKKAVIAANHVSF-LDGPLLAAYL----PEEPTFAIDTDIAKAWW--------VKPFLKLAKALPV 505 (1140)
T ss_pred EEEEEeCCccccccCCCEEEEECCcch-HHHHHHHHhC----CCCeEEEEeHHHhhhhH--------HHHHHHhcCeeec
Confidence 468999999999765 69999999997 5776766553 34589999999998876 8899999999999
Q ss_pred cHH------HHHHHhcCCCeEEEecCccccccccCCccceeecCCchhHHHHHHHcCCCEEEEEEecchhh
Q 013862 357 SAI------NFYKLVSSKAHVLLYPGGVREAFHRKGEEYKLFWPESSEFVRVAAAFGGKIVPFGVVGEDDL 421 (435)
Q Consensus 357 ~r~------~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~ivPv~~~g~~~~ 421 (435)
||+ ++.+.|++|++++|||||||+ ++|+..+ ||+|++++|.++++||+||++.|..+.
T Consensus 506 ~r~~~~~~~~~~~~l~~g~~~~ifPeGtr~---~~~~~~~----f~~g~~~~a~~~~~~i~pv~i~g~~~~ 569 (1140)
T PRK06814 506 DPTNPMATRTLIKEVQKGEKLVIFPEGRIT---VTGSLMK----IYDGPGMIADKAGAMVVPVRIDGLQFT 569 (1140)
T ss_pred CCCChHHHHHHHHHHHCCCEEEEeCCCCCC---CCCCccc----cchHHHHHHHHCCCCEEEEEEcCcccc
Confidence 986 677889999999999999999 7777655 999999999999999999999998764
|
|
| >TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.7e-18 Score=153.69 Aligned_cols=197 Identities=19% Similarity=0.157 Sum_probs=114.4
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
+|.|. ....++++++++++.+.++ ++++++||||||.+++.+|.++|++++++|++++..........
T Consensus 41 ~G~s~--~~~~~~~~~~~~~~~~~~~--------~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~-- 108 (245)
T TIGR01738 41 HGRSR--GFGPLSLADAAEAIAAQAP--------DPAIWLGWSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDW-- 108 (245)
T ss_pred CccCC--CCCCcCHHHHHHHHHHhCC--------CCeEEEEEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcc--
Confidence 45553 2245688888887765432 48999999999999999999999999999999887543211100
Q ss_pred cccccccccchhHHHHHHHHHhhcCChhHHHHH----hhhhccchhHHHHHhHHhHHhhhcchhHHhccCCc--hhhhhH
Q 013862 82 MPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMD----SIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPK--ETLLWK 155 (435)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 155 (435)
....... ....+.............. ................... ...... ......
T Consensus 109 ----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~ 171 (245)
T TIGR01738 109 ----PEGIKPD---VLTGFQQQLSDDYQRTIERFLALQTLGTPTARQDARALKQTL----------LARPTPNVQVLQAG 171 (245)
T ss_pred ----cccCCHH---HHHHHHHHhhhhHHHHHHHHHHHHHhcCCccchHHHHHHHHh----------hccCCCCHHHHHHH
Confidence 0000000 0000000000000000000 0000000000000000000 000000 011111
Q ss_pred HhhhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhh
Q 013862 156 LELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKG 230 (435)
Q Consensus 156 ~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~ 230 (435)
...+ ...+....+.++++|+++++|++|.+++.+ ..+.+.+.++++++++++++||++++|+|+++++.|.+
T Consensus 172 ~~~~--~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~ 243 (245)
T TIGR01738 172 LEIL--ATVDLRQPLQNISVPFLRLYGYLDGLVPAK-VVPYLDKLAPHSELYIFAKAAHAPFLSHAEAFCALLVA 243 (245)
T ss_pred HHHh--hcccHHHHHhcCCCCEEEEeecCCcccCHH-HHHHHHHhCCCCeEEEeCCCCCCccccCHHHHHHHHHh
Confidence 1111 111223567789999999999999999998 68889999999999999999999999999999999998
|
This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria. |
| >PLN03084 alpha/beta hydrolase fold protein; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.1e-18 Score=162.51 Aligned_cols=206 Identities=17% Similarity=0.156 Sum_probs=120.8
Q ss_pred CccccccCC---CCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccccc
Q 013862 2 YGACIFQLQ---IGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLL 78 (435)
Q Consensus 2 yG~s~~p~~---~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~ 78 (435)
||.|..+.. ..|+++++++|+.+++++++. ++++|+|||+||.+++.+|.++|++|+++|+++++........
T Consensus 164 ~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l~~----~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~ 239 (383)
T PLN03084 164 FGFSDKPQPGYGFNYTLDEYVSSLESLIDELKS----DKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKL 239 (383)
T ss_pred CCCCCCCcccccccCCHHHHHHHHHHHHHHhCC----CCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccc
Confidence 688876653 368999999999999999988 4899999999999999999999999999999998743211000
Q ss_pred ccccccccccccchhHHHHHHHHHhhc-CChhHHHHHhhhh---ccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhh
Q 013862 79 QTIMPIPAELMSGQMTLTLSYLLSLLT-GDPLKMAMDSIVK---GLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLW 154 (435)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (435)
+.........+..... ............. ....++....+......... .......
T Consensus 240 -----------p~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~---------~~~~l~~ 299 (383)
T PLN03084 240 -----------PSTLSEFSNFLLGEIFSQDPLRASDKALTSCGPYAMKEDDAMVYRRPYLTSGS---------SGFALNA 299 (383)
T ss_pred -----------hHHHHHHHHHHhhhhhhcchHHHHhhhhcccCccCCCHHHHHHHhccccCCcc---------hHHHHHH
Confidence 0000000000000000 0000000000000 00000000000000000000 0000000
Q ss_pred HHhhhhhh----hhhhhhh--cccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHH
Q 013862 155 KLELLKSA----SAYANAR--LDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTI 228 (435)
Q Consensus 155 ~~~~~~~~----~~~~~~~--l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I 228 (435)
....+... ....... ..++++|+++|+|++|.+++.+ ..+.+.+. ++++++++++|||++++|+|+++++.|
T Consensus 300 ~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~-~~~~~a~~-~~a~l~vIp~aGH~~~~E~Pe~v~~~I 377 (383)
T PLN03084 300 ISRSMKKELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLNYD-GVEDFCKS-SQHKLIELPMAGHHVQEDCGEELGGII 377 (383)
T ss_pred HHHHhhcccchhhHHHHhhhccccCCCCEEEEeeCCCCCcCHH-HHHHHHHh-cCCeEEEECCCCCCcchhCHHHHHHHH
Confidence 00001000 0001111 1357999999999999999998 68888887 588999999999999999999999999
Q ss_pred hhccccc
Q 013862 229 KGAGYYR 235 (435)
Q Consensus 229 ~~~~Fl~ 235 (435)
.+ |+.
T Consensus 378 ~~--Fl~ 382 (383)
T PLN03084 378 SG--ILS 382 (383)
T ss_pred HH--Hhh
Confidence 99 765
|
|
| >PRK00175 metX homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=9.4e-19 Score=164.94 Aligned_cols=212 Identities=15% Similarity=0.148 Sum_probs=123.4
Q ss_pred CCChHHHHHHHHHHHHHhhhcCCCCC-EEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccccc--cc-----cc-
Q 013862 12 GHHFTGLLKLIERTIRSENCRSSNRP-VYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLL--QT-----IM- 82 (435)
Q Consensus 12 ~~s~~~~a~dl~~~l~~l~~~~~~~~-~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~--~~-----~~- 82 (435)
.||++++++++.++++++++ ++ ++|+||||||.+++.+|.++|++|+++|++++......... .. ..
T Consensus 126 ~~~~~~~~~~~~~~l~~l~~----~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~i~~ 201 (379)
T PRK00175 126 VITIRDWVRAQARLLDALGI----TRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQNIAFNEVARQAILA 201 (379)
T ss_pred cCCHHHHHHHHHHHHHHhCC----CCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHHHHHHHHHHHHHHHh
Confidence 58999999999999999988 36 59999999999999999999999999999998754321100 00 00
Q ss_pred -ccccc-------cccchhHHHHHHHH-HhhcCChhHHHHHhhhhccchh---------HHHHHhHHhHHhhhcchhHHh
Q 013862 83 -PIPAE-------LMSGQMTLTLSYLL-SLLTGDPLKMAMDSIVKGLFLQ---------STIQERSQDFVAMSSYLPVLA 144 (435)
Q Consensus 83 -~~~~~-------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~ 144 (435)
.. +. .............. .......... ...+....... .....+.... .....
T Consensus 202 ~~~-~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~-~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~ 273 (379)
T PRK00175 202 DPD-WHGGDYYEHGVVPERGLAVARMIGHITYLSDDEL-DEKFGRELQSGELPFGFDVEFQVESYLRYQ------GDKFV 273 (379)
T ss_pred CCC-CCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHH-HhhcCccccccccccCCCccchHHHHHHHH------HHHHh
Confidence 00 00 00000000000000 0000000000 00000000000 0000000000 00011
Q ss_pred ccCCchhhhhHHhhhhhhh------hhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCc----eEEEeC-CCC
Q 013862 145 NILPKETLLWKLELLKSAS------AYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNC----QTRRFG-GGG 213 (435)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~------~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~----~~~~i~-~~g 213 (435)
.......+......+.... .+..+.+.+|++|+|+|+|++|.++|++ ..+.+++.++++ ++++++ ++|
T Consensus 274 ~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~-~~~~la~~i~~a~~~~~l~~i~~~~G 352 (379)
T PRK00175 274 ERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPA-RSREIVDALLAAGADVSYAEIDSPYG 352 (379)
T ss_pred hccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHH-HHHHHHHHHHhcCCCeEEEEeCCCCC
Confidence 1111111111111111111 1235678899999999999999999998 799999999887 777775 899
Q ss_pred ccccccCchhHHHHHhhcccccccc
Q 013862 214 HFLFLEDGVDLVTTIKGAGYYRRGR 238 (435)
Q Consensus 214 H~~~~e~pe~~~~~I~~~~Fl~~~~ 238 (435)
|++++|+|++|++.|.+ ||++..
T Consensus 353 H~~~le~p~~~~~~L~~--FL~~~~ 375 (379)
T PRK00175 353 HDAFLLDDPRYGRLVRA--FLERAA 375 (379)
T ss_pred chhHhcCHHHHHHHHHH--HHHhhh
Confidence 99999999999999999 987643
|
|
| >TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.80 E-value=8.5e-19 Score=164.01 Aligned_cols=210 Identities=17% Similarity=0.158 Sum_probs=120.7
Q ss_pred CCChHHHHHHHHHHHHHhhhcCCCCC-EEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccc--ccccc--cc--
Q 013862 12 GHHFTGLLKLIERTIRSENCRSSNRP-VYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSL--LQTIM--PI-- 84 (435)
Q Consensus 12 ~~s~~~~a~dl~~~l~~l~~~~~~~~-~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~--~~~~~--~~-- 84 (435)
.++++++++|+.+++++++. ++ ++|+||||||++++.+|.++|++|+++|++++........ +.... ..
T Consensus 106 ~~~~~~~~~~~~~~~~~l~~----~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 181 (351)
T TIGR01392 106 LITIRDDVKAQKLLLDHLGI----EQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAWCIAFNEVQRQAILA 181 (351)
T ss_pred CCcHHHHHHHHHHHHHHcCC----CCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHHHHHHHHHHHHHHHh
Confidence 58999999999999999988 46 9999999999999999999999999999999875432211 00000 00
Q ss_pred -c-cc--cc-----cchhHHHHHHHHHhhcCChhHHHHHhhhhccchh----------HHHHHhHHhHHhhhcchhHHhc
Q 013862 85 -P-AE--LM-----SGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQ----------STIQERSQDFVAMSSYLPVLAN 145 (435)
Q Consensus 85 -~-~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~ 145 (435)
. .. .. +................... .....+....... .....+..... ..+..
T Consensus 182 ~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 254 (351)
T TIGR01392 182 DPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEE-SMAERFGRAPQSGESPASGFDTRFQVESYLRYQG------DKFVD 254 (351)
T ss_pred CCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHH-HHHHHhCcCcccccccccccCccchHHHHHHHHH------HHHHh
Confidence 0 00 00 00000000000000000000 0000000000000 00000000000 00011
Q ss_pred cCCchhhhhHHhhhhhhh-----hhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEE-----EeCCCCcc
Q 013862 146 ILPKETLLWKLELLKSAS-----AYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTR-----RFGGGGHF 215 (435)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~-----~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~-----~i~~~gH~ 215 (435)
......+......+.... .+..+.+.+|++|+|+|+|++|.++|++ ..+.+++.+++++++ ++++|||+
T Consensus 255 ~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~-~~~~~a~~i~~~~~~v~~~~i~~~~GH~ 333 (351)
T TIGR01392 255 RFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPA-ESRELAKALPAAGLRVTYVEIESPYGHD 333 (351)
T ss_pred hcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHH-HHHHHHHHHhhcCCceEEEEeCCCCCcc
Confidence 111111111111111110 1234678899999999999999999999 799999999998765 56789999
Q ss_pred ccccCchhHHHHHhhccccc
Q 013862 216 LFLEDGVDLVTTIKGAGYYR 235 (435)
Q Consensus 216 ~~~e~pe~~~~~I~~~~Fl~ 235 (435)
+++|+|++|++.|.+ |++
T Consensus 334 ~~le~p~~~~~~l~~--FL~ 351 (351)
T TIGR01392 334 AFLVETDQVEELIRG--FLR 351 (351)
T ss_pred hhhcCHHHHHHHHHH--HhC
Confidence 999999999999999 864
|
This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes. |
| >cd07993 LPLAT_DHAPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT-like | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.6e-19 Score=154.65 Aligned_cols=111 Identities=17% Similarity=0.179 Sum_probs=90.7
Q ss_pred CCCCCEEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcchHHHHHHhCCccccHH---------
Q 013862 289 PSEGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRIMGSVPVSAI--------- 359 (435)
Q Consensus 289 p~~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~--------- 359 (435)
++++++|+|+||+|+ +|.+++...+.. .+.++.++++.+.+..|+ ++++++..|+++++|+
T Consensus 19 ~~~~~~i~v~NH~S~-lD~~~l~~~~~~-~~~~~~~va~~e~~~~~~--------~g~~l~~~g~i~I~R~~~~~~~~~~ 88 (205)
T cd07993 19 QEGHPVVLLPTHRSY-LDFLLLSFILFS-LGLPLPHIAAGENLNIPI--------LGTLLRRLGAFFIRRSFGKDPLYRA 88 (205)
T ss_pred hcCCCEEEEecCcch-hHHHHHHHHHHH-CCCCCcEEEEchhhCcHH--------HHHHHHHCCCEEEecCCCccHHHHH
Confidence 434899999999996 677676655432 234477888888887654 8899999999999985
Q ss_pred ----HHHHHhcCCCeEEEecCccccccccCCccceeecCCchhHHHHHHHc-------CCCEEEEEEe
Q 013862 360 ----NFYKLVSSKAHVLLYPGGVREAFHRKGEEYKLFWPESSEFVRVAAAF-------GGKIVPFGVV 416 (435)
Q Consensus 360 ----~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~~~~~~~~g~~~~a~~~-------~~~ivPv~~~ 416 (435)
.+.+.|++|.+|+|||||||+ ++|+..+ ||+|++++|.++ ++|||||++.
T Consensus 89 ~~~~~~~~~l~~g~~l~iFPEGtrs---~~g~~~~----~k~G~~~~a~~~~~~~~~~~v~IvPV~i~ 149 (205)
T cd07993 89 VLQEYVQELLKNGQPLEFFIEGTRS---RTGKLLP----PKLGLLSVVVEAYLKGSVPDVLIVPVSIS 149 (205)
T ss_pred HHHHHHHHHHhCCceEEEEcCCCCC---CCCCccc----hHHHHHHHHHHHHhhCCCCCeEEEEeEEe
Confidence 245688999999999999999 7776555 999999999998 9999999997
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as dihydroxyacetone phosphate acyltransferase (DHAPAT, also known as 1 glycerol-3-phosphate O-acyltransferase 1) and similar proteins. |
| >PHA02857 monoglyceride lipase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=9.2e-18 Score=152.11 Aligned_cols=205 Identities=15% Similarity=0.180 Sum_probs=117.9
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
||.|..+.....++.++++|+.+.++.+....+.++++|+||||||.+|+.+|.++|++++++|+++|......
T Consensus 63 ~G~S~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~------ 136 (276)
T PHA02857 63 HGRSNGEKMMIDDFGVYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEA------ 136 (276)
T ss_pred CCCCCCccCCcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEecccccccc------
Confidence 56665332223466777778877777665444456899999999999999999999999999999998643110
Q ss_pred cccccccccchhHHHHHHH-HHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhh
Q 013862 82 MPIPAELMSGQMTLTLSYL-LSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLK 160 (435)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (435)
.. ....+... ........... ............ ... ..... .. . ........+......
T Consensus 137 ----~~-----~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~-~~~~~-~~----~-~~~~~~~~~~~~~~~ 196 (276)
T PHA02857 137 ----VP-----RLNLLAAKLMGIFYPNKIVG---KLCPESVSRDMD-EVY-KYQYD-PL----V-NHEKIKAGFASQVLK 196 (276)
T ss_pred ----cc-----HHHHHHHHHHHHhCCCCccC---CCCHhhccCCHH-HHH-HHhcC-CC----c-cCCCccHHHHHHHHH
Confidence 00 00000100 01010000000 000000000000 000 00000 00 0 000001111111111
Q ss_pred hhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhC-CCceEEEeCCCCccccccCc---hhHHHHHhhcccccc
Q 013862 161 SASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRAL-PNCQTRRFGGGGHFLFLEDG---VDLVTTIKGAGYYRR 236 (435)
Q Consensus 161 ~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p---e~~~~~I~~~~Fl~~ 236 (435)
........+.++++|+|+++|++|.++|++ ..+++.+.+ ++.++++++++||.++.|++ +++.+.+.+ |+..
T Consensus 197 -~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~-~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~--~l~~ 272 (276)
T PHA02857 197 -ATNKVRKIIPKIKTPILILQGTNNEISDVS-GAYYFMQHANCNREIKIYEGAKHHLHKETDEVKKSVMKEIET--WIFN 272 (276)
T ss_pred -HHHHHHHhcccCCCCEEEEecCCCCcCChH-HHHHHHHHccCCceEEEeCCCcccccCCchhHHHHHHHHHHH--HHHH
Confidence 112234678889999999999999999999 688888876 46899999999999999976 467778777 6643
|
|
| >PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.5e-18 Score=151.05 Aligned_cols=196 Identities=18% Similarity=0.160 Sum_probs=110.7
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCc-eeEEEEecCCcccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDM-DLVLILANPATSFRKSLLQT 80 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~-v~~lVli~~~~~~~~~~~~~ 80 (435)
||.|..+. ..+++++++|+.+++++++. ++++++||||||.+|+.+|.++|+. |+++|++++...........
T Consensus 38 ~G~S~~~~--~~~~~~~~~~l~~~l~~~~~----~~~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~ 111 (242)
T PRK11126 38 HGGSAAIS--VDGFADVSRLLSQTLQSYNI----LPYWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQ 111 (242)
T ss_pred CCCCCCcc--ccCHHHHHHHHHHHHHHcCC----CCeEEEEECHHHHHHHHHHHhCCcccccEEEEeCCCCCCCCHHHHH
Confidence 67776543 34999999999999999877 5999999999999999999999765 99999988664321111000
Q ss_pred ccccccccccchhHHHHHHHHHhhcCChhHHHHHhh-----hhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhH
Q 013862 81 IMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSI-----VKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWK 155 (435)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (435)
. . ... ...+................ ..... ............ . .........
T Consensus 112 ~--~-~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----------~-~~~~~~~~~ 168 (242)
T PRK11126 112 A--R-WQN--------DRQWAQRFRQEPLEQVLADWYQQPVFASLN-AEQRQQLVAKRS----------N-NNGAAVAAM 168 (242)
T ss_pred H--H-Hhh--------hHHHHHHhccCcHHHHHHHHHhcchhhccC-ccHHHHHHHhcc----------c-CCHHHHHHH
Confidence 0 0 000 00000000000000000000 00000 000000000000 0 000000000
Q ss_pred Hhhh-hhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhcccc
Q 013862 156 LELL-KSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYY 234 (435)
Q Consensus 156 ~~~~-~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl 234 (435)
.... .....+..+.+.++++|+++++|++|..+. .+.+. .+++++++++|||++++|+|+++++.|.+ |+
T Consensus 169 ~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~------~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~--fl 239 (242)
T PRK11126 169 LEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ------ALAQQ-LALPLHVIPNAGHNAHRENPAAFAASLAQ--IL 239 (242)
T ss_pred HHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH------HHHHH-hcCeEEEeCCCCCchhhhChHHHHHHHHH--HH
Confidence 0000 001112235678899999999999998542 12222 37899999999999999999999999999 77
Q ss_pred c
Q 013862 235 R 235 (435)
Q Consensus 235 ~ 235 (435)
+
T Consensus 240 ~ 240 (242)
T PRK11126 240 R 240 (242)
T ss_pred h
Confidence 5
|
|
| >TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.1e-18 Score=155.16 Aligned_cols=219 Identities=14% Similarity=0.103 Sum_probs=119.9
Q ss_pred CccccccCCC--CCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccc
Q 013862 2 YGACIFQLQI--GHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQ 79 (435)
Q Consensus 2 yG~s~~p~~~--~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~ 79 (435)
+|.|..+... .++++++++|+.+++++++. ++++++||||||.+++.+|.++|++++++|++++.........
T Consensus 64 ~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~- 138 (288)
T TIGR01250 64 CGYSDQPDDSDELWTIDYFVDELEEVREKLGL----DKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVK- 138 (288)
T ss_pred CCCCCCCCcccccccHHHHHHHHHHHHHHcCC----CcEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHHHH-
Confidence 4566554333 38999999999999999877 4799999999999999999999999999999987642211100
Q ss_pred cccccccccccchhHHHHHHHHHhh-cCChhHHH-HHhhhh-ccchhHHHHHhHHhHHhhhcchhHHhcc-CCchhhhhH
Q 013862 80 TIMPIPAELMSGQMTLTLSYLLSLL-TGDPLKMA-MDSIVK-GLFLQSTIQERSQDFVAMSSYLPVLANI-LPKETLLWK 155 (435)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 155 (435)
..... ...+............... ..+..... ...... .................. ........ .....+..
T Consensus 139 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~- 214 (288)
T TIGR01250 139 ELNRL-RKELPPEVRAAIKRCEASGDYDNPEYQEAVEVFYHHLLCRTRKWPEALKHLKSG--MNTNVYNIMQGPNEFTI- 214 (288)
T ss_pred HHHHH-HhhcChhHHHHHHHHHhccCcchHHHHHHHHHHHHHhhcccccchHHHHHHhhc--cCHHHHhcccCCccccc-
Confidence 00000 0000000000000000000 00000000 000000 000000000000000000 00000000 00000000
Q ss_pred HhhhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhccccc
Q 013862 156 LELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYR 235 (435)
Q Consensus 156 ~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~ 235 (435)
.. .....+..+.+.++++|+++++|++|.+ ++. ..+.+.+.++++++++++++||+++.|+|+++++.|.+ |++
T Consensus 215 ~~--~~~~~~~~~~l~~i~~P~lii~G~~D~~-~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~--fl~ 288 (288)
T TIGR01250 215 TG--NLKDWDITDKLSEIKVPTLLTVGEFDTM-TPE-AAREMQELIAGSRLVVFPDGSHMTMIEDPEVYFKLLSD--FIR 288 (288)
T ss_pred cc--cccccCHHHHhhccCCCEEEEecCCCcc-CHH-HHHHHHHhccCCeEEEeCCCCCCcccCCHHHHHHHHHH--HhC
Confidence 00 0001122356778999999999999985 556 58889999999999999999999999999999999999 763
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase |
| >TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Probab=99.77 E-value=6.9e-18 Score=150.22 Aligned_cols=201 Identities=17% Similarity=0.162 Sum_probs=122.2
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
+|.|..+ ...++++++++|+.++++.++. ++++++||||||.+++.+|.++|++++++|++++......... .
T Consensus 50 ~G~s~~~-~~~~~~~~~~~~~~~~i~~~~~----~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~--~ 122 (251)
T TIGR02427 50 HGLSDAP-EGPYSIEDLADDVLALLDHLGI----ERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPES--W 122 (251)
T ss_pred CCCCCCC-CCCCCHHHHHHHHHHHHHHhCC----CceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhh--H
Confidence 4666443 3468999999999999999876 4899999999999999999999999999999987643211100 0
Q ss_pred ccccccccc-chhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhh
Q 013862 82 MPIPAELMS-GQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLK 160 (435)
Q Consensus 82 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (435)
... ...+. .................. . ................. .....+......+
T Consensus 123 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~-------~--~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~- 180 (251)
T TIGR02427 123 NAR-IAAVRAEGLAALADAVLERWFTPG-------F--REAHPARLDLYRNMLVR-----------QPPDGYAGCCAAI- 180 (251)
T ss_pred HHH-HhhhhhccHHHHHHHHHHHHcccc-------c--ccCChHHHHHHHHHHHh-----------cCHHHHHHHHHHH-
Confidence 000 00000 000000000000000000 0 00000000000000000 0000000000001
Q ss_pred hhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhccccc
Q 013862 161 SASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYR 235 (435)
Q Consensus 161 ~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~ 235 (435)
........+.++++|+++++|++|..++.+ ..+.+.+..++.++++++++||++++|+|+++++.|.+ |++
T Consensus 181 -~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~--fl~ 251 (251)
T TIGR02427 181 -RDADFRDRLGAIAVPTLCIAGDQDGSTPPE-LVREIADLVPGARFAEIRGAGHIPCVEQPEAFNAALRD--FLR 251 (251)
T ss_pred -hcccHHHHhhhcCCCeEEEEeccCCcCChH-HHHHHHHhCCCceEEEECCCCCcccccChHHHHHHHHH--HhC
Confidence 011123456788999999999999999998 68889999999999999999999999999999999998 753
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. |
| >cd07985 LPLAT_GPAT Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT | Back alignment and domain information |
|---|
Probab=99.77 E-value=9e-19 Score=147.18 Aligned_cols=124 Identities=15% Similarity=0.129 Sum_probs=94.2
Q ss_pred cCCCCCCCCEEEEecCCcccchhHhhhHHHhhhcCceeeeecccccc-------ccccCCCCCCcchHHHHHHhCCcccc
Q 013862 285 LSGIPSEGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVF-------FNAKDGGLPDLVTYDTFRIMGSVPVS 357 (435)
Q Consensus 285 ~~~~p~~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~g~~~~~ 357 (435)
.||+|+++++|++|||+|. .|..++...+. +...++++.++| +.|+ ++++++..|.++|+
T Consensus 15 ~e~ip~~~~vIl~sNH~S~-~Dp~ii~~~~~----r~~~~lAk~~lf~ag~~~~~~pl--------~~~f~~~~~~~pV~ 81 (235)
T cd07985 15 EEQLAQGHNVVLLANHQTE-ADPAVISLLLE----KTHPYLAENMIYVAGDRVVSDPL--------CKPFSMGRNLLCVH 81 (235)
T ss_pred HHhccCCCCEEEEECCccc-ccHHHHHHHhc----cccHHHhhhhheeccccccccHh--------HHHHHhhCCceeee
Confidence 4899999999999999997 46655555543 336788888887 5544 88999999999987
Q ss_pred HH----------------------HHHHHhcCCCe-EEEecCccccccccCCccceeecCCc----hhHHHHHHHcCCC-
Q 013862 358 AI----------------------NFYKLVSSKAH-VLLYPGGVREAFHRKGEEYKLFWPES----SEFVRVAAAFGGK- 409 (435)
Q Consensus 358 r~----------------------~~~~~l~~g~~-~~ifPeG~~~~~~~~~~~~~~~~~~~----~g~~~~a~~~~~~- 409 (435)
|+ .+.+.|++|+. ++|||||||+....+|+...- +|. .++.+||.++++|
T Consensus 82 r~k~~~~~P~~~~~k~~~~~~alk~~~~lLk~G~~~i~IfPEGtR~r~~~~g~~~p~--~Fd~~~~~~~~~La~~s~~p~ 159 (235)
T cd07985 82 SKKHIDDPPELKEEKMKANLATLKEMQQLLNEGGQLIWVAPSGGRDRPDANGEWYPD--PFDPSAVEMMRLLAQKSRVPT 159 (235)
T ss_pred cCcccccchhhhhhhhhccHHHHHHHHHHHHcCCeEEEEcCCCCCCCCCCCCCccCC--ccchHHHHHHHHHHHhcCCCc
Confidence 76 46678899976 889999999943334443332 143 5588999999999
Q ss_pred -EEEEEEecchhhhhh
Q 013862 410 -IVPFGVVGEDDLAQV 424 (435)
Q Consensus 410 -ivPv~~~g~~~~~~~ 424 (435)
|+|+++. +++++.-
T Consensus 160 hi~Plai~-~ydi~Pp 174 (235)
T cd07985 160 HLYPMALL-TYDIMPP 174 (235)
T ss_pred eEEeeEEE-eecccCC
Confidence 9999999 6665544
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: glycerol-3-phosphate 1-acyltransferase (GPAT, PlsB). LPLATs are acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. This subgroup includes glycerol-3-phosphate 1-acyltransferase (GPAT, PlsB). |
| >PLN02298 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.4e-17 Score=153.22 Aligned_cols=212 Identities=14% Similarity=0.131 Sum_probs=122.0
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhc--CCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCR--SSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQ 79 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~--~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~ 79 (435)
||.|..+.....+++++++|+.++++.+... ..+.+++|+||||||.+++.++.++|++|+++|+++|.........
T Consensus 98 hG~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~- 176 (330)
T PLN02298 98 HGRSEGLRAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIR- 176 (330)
T ss_pred CCCCCCccccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccC-
Confidence 5777543333468999999999999998753 2235799999999999999999999999999999998753221100
Q ss_pred cccccccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhh
Q 013862 80 TIMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELL 159 (435)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (435)
.. ....... ........................... .......... .+ .......+....+
T Consensus 177 -------~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~--~~---~~~~~~~~~~~~~ 237 (330)
T PLN02298 177 -------PP--WPIPQIL-TFVARFLPTLAIVPTADLLEKSVKVPA----KKIIAKRNPM--RY---NGKPRLGTVVELL 237 (330)
T ss_pred -------Cc--hHHHHHH-HHHHHHCCCCccccCCCcccccccCHH----HHHHHHhCcc--cc---CCCccHHHHHHHH
Confidence 00 0000000 011111000000000000000000000 0000000000 00 0001111111222
Q ss_pred hhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCC--CceEEEeCCCCccccccCchh----HHHHHhhccc
Q 013862 160 KSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALP--NCQTRRFGGGGHFLFLEDGVD----LVTTIKGAGY 233 (435)
Q Consensus 160 ~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~pe~----~~~~I~~~~F 233 (435)
+. .......+.++++|+|+++|++|.++|++ ..+.+.+.++ ++++++++++||.++.++|+. +.+.|.+ |
T Consensus 238 ~~-~~~~~~~l~~i~~PvLii~G~~D~ivp~~-~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~--f 313 (330)
T PLN02298 238 RV-TDYLGKKLKDVSIPFIVLHGSADVVTDPD-VSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILS--W 313 (330)
T ss_pred HH-HHHHHHhhhhcCCCEEEEecCCCCCCCHH-HHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHH--H
Confidence 11 11234567889999999999999999999 6888887764 789999999999999999865 5556666 6
Q ss_pred cccc
Q 013862 234 YRRG 237 (435)
Q Consensus 234 l~~~ 237 (435)
+.+.
T Consensus 314 l~~~ 317 (330)
T PLN02298 314 LNER 317 (330)
T ss_pred HHHh
Confidence 6544
|
|
| >TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.5e-17 Score=146.40 Aligned_cols=208 Identities=17% Similarity=0.183 Sum_probs=117.7
Q ss_pred CccccccCC-CCCChHHHHHH-HHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccc
Q 013862 2 YGACIFQLQ-IGHHFTGLLKL-IERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQ 79 (435)
Q Consensus 2 yG~s~~p~~-~~~s~~~~a~d-l~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~ 79 (435)
||.|..+.. ..+++++++++ +..+++.++. ++++++||||||.+++.+|.++|++|+++|++++..........
T Consensus 38 ~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~ 113 (251)
T TIGR03695 38 HGSSQSPDEIERYDFEEAAQDILATLLDQLGI----EPFFLVGYSMGGRIALYYALQYPERVQGLILESGSPGLATEEER 113 (251)
T ss_pred CCCCCCCCccChhhHHHHHHHHHHHHHHHcCC----CeEEEEEeccHHHHHHHHHHhCchheeeeEEecCCCCcCchHhh
Confidence 566655543 46789999999 7778887755 58999999999999999999999999999999876432211100
Q ss_pred cccccccccccchhHH-HHHHHHHhhcCChhHHHHHhhhh-ccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHh
Q 013862 80 TIMPIPAELMSGQMTL-TLSYLLSLLTGDPLKMAMDSIVK-GLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLE 157 (435)
Q Consensus 80 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (435)
.............+.. ............. .+.. ................ .. ..........
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~----------~~-~~~~~~~~~~ 176 (251)
T TIGR03695 114 AARRQNDEQLAQRFEQEGLEAFLDDWYQQP------LFASQKNLPPEQRQALRAKRL----------AN-NPEGLAKMLR 176 (251)
T ss_pred hhhhhcchhhhhHHHhcCccHHHHHHhcCc------eeeecccCChHHhHHHHHhcc----------cc-cchHHHHHHH
Confidence 0000000000000000 0000000000000 0000 0000000000000000 00 0000000000
Q ss_pred hh-hhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhcccc
Q 013862 158 LL-KSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYY 234 (435)
Q Consensus 158 ~~-~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl 234 (435)
.. ..........+.++++|+++++|++|..++ . ..+.+.+..+++++++++++||++++|+|+++++.|.+ |+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~-~~~~~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~i~~--~l 250 (251)
T TIGR03695 177 ATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-Q-IAKEMQKLLPNLTLVIIANAGHNIHLENPEAFAKILLA--FL 250 (251)
T ss_pred HhhhhcccchHHHhhCCCCceEEEeeCcchHHH-H-HHHHHHhcCCCCcEEEEcCCCCCcCccChHHHHHHHHH--Hh
Confidence 00 001111224567889999999999998764 4 57788888999999999999999999999999999999 65
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase. |
| >PRK10749 lysophospholipase L2; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.1e-17 Score=152.05 Aligned_cols=213 Identities=15% Similarity=0.168 Sum_probs=120.2
Q ss_pred CccccccCC-----CCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccc
Q 013862 2 YGACIFQLQ-----IGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKS 76 (435)
Q Consensus 2 yG~s~~p~~-----~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~ 76 (435)
+|.|..+.. ..++++++++|+.++++++....+..+++++||||||.+++.+|.++|++++++|+++|.......
T Consensus 92 ~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~ 171 (330)
T PRK10749 92 QGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLP 171 (330)
T ss_pred CCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCC
Confidence 566654322 236899999999999998744334468999999999999999999999999999999887432111
Q ss_pred ccccccccccccccchhHHHHHHHHHhhc--CChhHHHHHhhh-----hc-c-chhHHHHHhHHhHHhhhcchhHHhccC
Q 013862 77 LLQTIMPIPAELMSGQMTLTLSYLLSLLT--GDPLKMAMDSIV-----KG-L-FLQSTIQERSQDFVAMSSYLPVLANIL 147 (435)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-----~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (435)
. ................ ............ .. . ...+......+...... . + ..
T Consensus 172 ~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~---~--~~ 233 (330)
T PRK10749 172 L------------PSWMARRILNWAEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDP-E---L--RV 233 (330)
T ss_pred C------------CcHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCC-C---c--cc
Confidence 0 0000000000000000 000000000000 00 0 00111111111111100 0 0 00
Q ss_pred CchhhhhHHhhhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhC-------CCceEEEeCCCCccccccC
Q 013862 148 PKETLLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRAL-------PNCQTRRFGGGGHFLFLED 220 (435)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~-------~~~~~~~i~~~gH~~~~e~ 220 (435)
......+....+.. .......+.++++|+|+|+|++|.+++++ ..+.+.+.+ +++++++++||||.++.|.
T Consensus 234 ~~~~~~~~~~~~~~-~~~~~~~~~~i~~P~Lii~G~~D~vv~~~-~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~ 311 (330)
T PRK10749 234 GGPTYHWVRESILA-GEQVLAGAGDITTPLLLLQAEEERVVDNR-MHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEK 311 (330)
T ss_pred CCCcHHHHHHHHHH-HHHHHhhccCCCCCEEEEEeCCCeeeCHH-HHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCC
Confidence 01111222222211 11223567789999999999999999998 688777755 3558999999999999998
Q ss_pred c---hhHHHHHhhcccccc
Q 013862 221 G---VDLVTTIKGAGYYRR 236 (435)
Q Consensus 221 p---e~~~~~I~~~~Fl~~ 236 (435)
+ +.+.+.|.+ |+.+
T Consensus 312 ~~~r~~v~~~i~~--fl~~ 328 (330)
T PRK10749 312 DAMRSVALNAIVD--FFNR 328 (330)
T ss_pred cHHHHHHHHHHHH--HHhh
Confidence 6 557777777 6643
|
|
| >PRK14014 putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.6e-17 Score=149.08 Aligned_cols=131 Identities=12% Similarity=0.106 Sum_probs=100.6
Q ss_pred CCCcEEeccCCCCCCCCEEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcchHHHHHHhCCccc
Q 013862 277 PDGKIVRGLSGIPSEGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRIMGSVPV 356 (435)
Q Consensus 277 ~~~~~~~~~~~~p~~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 356 (435)
..+++++|.|++|.++++|++|||+|+ .|.+++...+.... ..+++++|+++++.|+ +++.+..+|.+.+
T Consensus 72 g~k~~V~G~e~l~~~~~~IiisNHqS~-~D~l~l~~~~~~~~-~~~kfv~K~eL~~iP~--------~G~~~~~~~~ifi 141 (301)
T PRK14014 72 RTQWDVEGLEGLSKKGWYLVISNHQSW-VDILVLQYVFNRRI-PMLKFFLKQELIWVPF--------LGLAWWALDFPFM 141 (301)
T ss_pred CcEEEEEcCCCCCCCCCEEEEECCCcH-HHHHHHHHHHhhcc-CceEEEehHHhhhccc--------HHHHHHHcCCeEE
Confidence 458899999999989999999999997 57766665543321 2478999999998876 8888999999999
Q ss_pred cHH--------------------HHHHHh-cCCCeEEEecCccccccccCCc------cceeecCCchhHHHHHHHcC--
Q 013862 357 SAI--------------------NFYKLV-SSKAHVLLYPGGVREAFHRKGE------EYKLFWPESSEFVRVAAAFG-- 407 (435)
Q Consensus 357 ~r~--------------------~~~~~l-~~g~~~~ifPeG~~~~~~~~~~------~~~~~~~~~~g~~~~a~~~~-- 407 (435)
+|. ++.+.+ +.|.+++|||||||. .+++ .++-.+++|+|.+++|.++.
T Consensus 142 ~R~~~~~~~~~p~~~~~d~~~~~~a~~~~~~~~~~l~IFPEGTR~---t~~k~~~~~~~~~~lL~pk~ggf~~a~~~~~~ 218 (301)
T PRK14014 142 KRYSKAYLAKNPELKGKDLETTRRACEKFKRMPTTIVNFVEGTRF---TPEKHQQQQSPYQHLLKPKAGGIAFALNAMGE 218 (301)
T ss_pred eccchhhhhhchhhhhhHHHHHHHHHHHHhcCCcEEEEeccceec---CcccccccCCCcccccCCCCccHHHHHHhhhc
Confidence 884 112222 347899999999997 3231 23334458999999999996
Q ss_pred --CCEEEEEEecchh
Q 013862 408 --GKIVPFGVVGEDD 420 (435)
Q Consensus 408 --~~ivPv~~~g~~~ 420 (435)
.+|+||.+.+.+.
T Consensus 219 ~~~~I~dvti~y~~~ 233 (301)
T PRK14014 219 QFDGLLDVTIVYPDG 233 (301)
T ss_pred cCCEEEEEEEEeCCC
Confidence 7899999997654
|
|
| >cd07983 LPLAT_DUF374-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: DUF374 | Back alignment and domain information |
|---|
Probab=99.73 E-value=1e-17 Score=142.16 Aligned_cols=119 Identities=17% Similarity=0.138 Sum_probs=93.1
Q ss_pred CCCcEEeccCCCC----CCCCEEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcchHHHHHHhC
Q 013862 277 PDGKIVRGLSGIP----SEGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRIMG 352 (435)
Q Consensus 277 ~~~~~~~~~~~~p----~~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 352 (435)
..+++++|.|+++ .++|+|+++||++. +|..++.. . +.++.+++++.. ..|+ +++++...|
T Consensus 7 ~~~~~v~g~e~l~~~~~~~~~~I~~~~H~s~-l~~~~~~~---~--~~~~~~v~~~~~-~~~~--------~~~~~~~~g 71 (189)
T cd07983 7 TLRWRVIGDESADALIAQGEPVILAFWHGRL-LLMPYLFR---R--RKRIAALISRSK-DGEI--------IARVLERLG 71 (189)
T ss_pred eEeEEEeCchhhhhhccCCCCEEEEEeCchH-HHhHHHhc---c--CCCeEEEEecCc-CHHH--------HHHHHHHhC
Confidence 3578999999998 57899999999874 45533321 1 345777777653 3433 788899999
Q ss_pred CccccHH----------HHHHHhcCCCeEEEecCccccccccCCccceeecCCchhHHHHHHHcCCCEEEEEEecchh
Q 013862 353 SVPVSAI----------NFYKLVSSKAHVLLYPGGVREAFHRKGEEYKLFWPESSEFVRVAAAFGGKIVPFGVVGEDD 420 (435)
Q Consensus 353 ~~~~~r~----------~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~ivPv~~~g~~~ 420 (435)
+++++|+ .+.+.|++|.+|+|||||+|+ . .. ++++|++++|.++|+|||||++.|...
T Consensus 72 ~~~i~r~~~~~~~~~~~~~~~~lk~g~~v~ifpeG~r~---~---~~----~~~~G~~~lA~~~~~pIvPv~i~~~~~ 139 (189)
T cd07983 72 IRVVRGSSSRGGAAALREMLRALKDGYNIAITPDGPRG---P---RY----KVKPGVILLARKSGAPIVPVAIAASRA 139 (189)
T ss_pred CCEEEcCCCCcHHHHHHHHHHHHhCCCEEEEcCCCCCC---c---ce----ecchHHHHHHHHhCCCEEEEEEEEEcc
Confidence 9999642 677889999999999999986 2 22 389999999999999999999998754
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are the uncharacterized DUF374 phospholipid/glycerol acyltransferases and similar proteins. |
| >cd06551 LPLAT Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.9e-17 Score=140.75 Aligned_cols=126 Identities=22% Similarity=0.251 Sum_probs=99.0
Q ss_pred CCCcEEeccCCCCCCCCEEEEecCCcccchhHhhhHHHhhhcCceeeeecccccc-ccccCCCCCCcchHHHHHHhCCcc
Q 013862 277 PDGKIVRGLSGIPSEGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVF-FNAKDGGLPDLVTYDTFRIMGSVP 355 (435)
Q Consensus 277 ~~~~~~~~~~~~p~~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~ 355 (435)
..+++++|.|++|.++|+|+++||.+. +|.+++...+....+.++.+++++..+ .. .+++..|.++
T Consensus 11 ~~~~~~~g~~~~p~~~~~i~v~nH~s~-~D~~~~~~~~~~~~~~~~~~v~~~~~~~~~------------~~~~~~g~~~ 77 (187)
T cd06551 11 FVRLEVKGPPPPPGGGPVLFVSNHSSW-WDGLILFLLLERGLRRDVYGLMDEELLERY------------PFFTRLGAFS 77 (187)
T ss_pred eEEEEEeccccCCCCCCEEEEEcchhh-HHHHHHHHHHHhccCCCeEEEEcHhhhhhC------------hHHhhcCeEE
Confidence 357899999999999999999999987 477666665432223558888888765 22 2355559999
Q ss_pred ccH----------HHHHHHhcC-CCeEEEecCccccccccCC-ccceeecCCchhHHHHHHHcCCCEEEEEEecchhhh
Q 013862 356 VSA----------INFYKLVSS-KAHVLLYPGGVREAFHRKG-EEYKLFWPESSEFVRVAAAFGGKIVPFGVVGEDDLA 422 (435)
Q Consensus 356 ~~r----------~~~~~~l~~-g~~~~ifPeG~~~~~~~~~-~~~~~~~~~~~g~~~~a~~~~~~ivPv~~~g~~~~~ 422 (435)
++| +.+.+.|++ |..++|||||+++ ..+ ... ++++|++++|.++++||||+++.+.++.+
T Consensus 78 i~r~~~~~~~~~~~~~~~~l~~~g~~v~ifPeG~~~---~~~~~~~----~~~~g~~~la~~~~~~IvPv~i~~~~~~~ 149 (187)
T cd06551 78 VDRDSPRSAAKSLKYVARLLSKPGSVVWIFPEGTRT---RRDKRPL----QFKPGVAHLAEKAGVPIVPVALRYTFELF 149 (187)
T ss_pred ecCCChhhHHHHHHHHHHHHhcCCcEEEEeCCcccC---CCCCCcc----cccchHHHHHHHcCCcEEEEEEecccccc
Confidence 876 267888999 9999999999987 433 222 48999999999999999999999988763
|
Lysophospholipid acyltransferase (LPLAT) superfamily members are acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis. These proteins catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this superfamily are LPLATs such as glycerol-3-phosphate 1-acyltransferase (GPAT, PlsB), 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), lysophosphatidylcholine acyltransferase 1 (LPCAT-1), lysophosphatidylethanolamine acyltransferase (LPEAT, also known as, MBOAT2, membrane-bound O-acyltransferase domain-containing protein 2), lipid A biosynthesis lauroyl/myristoyl acyltransferase, 2-acylglycerol O-acyltransferase (MGAT), dihydroxyacetone phosphate acyltransferase (DHAPAT, also known as 1 glycerol-3-p |
| >KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.1e-16 Score=138.22 Aligned_cols=209 Identities=17% Similarity=0.229 Sum_probs=122.3
Q ss_pred CCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhH-HHHHHHHHhCCCceeEEEEecCCcccccccccccccccccc
Q 013862 10 QIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGA-CLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAEL 88 (435)
Q Consensus 10 ~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg-~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~ 88 (435)
...++..++++|+..+++..+......+++++|||||| .+++..+...|+.+.++|+++.++.... .
T Consensus 97 ~~~h~~~~ma~dv~~Fi~~v~~~~~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~------------~ 164 (315)
T KOG2382|consen 97 ITVHNYEAMAEDVKLFIDGVGGSTRLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVG------------R 164 (315)
T ss_pred ccccCHHHHHHHHHHHHHHcccccccCCceecccCcchHHHHHHHHHhcCcccceeEEEecCCccCC------------c
Confidence 34567999999999999988643233689999999999 7888888999999999999986653111 1
Q ss_pred ccchhHHHHHHHHHhhcC----ChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhh-h
Q 013862 89 MSGQMTLTLSYLLSLLTG----DPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSA-S 163 (435)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 163 (435)
......+.+..+...-.. ............... +....++.............+......+... +.+... .
T Consensus 165 ~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~~-d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~---~~~~~~~~ 240 (315)
T KOG2382|consen 165 SYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVGF-DNLVRQFILTNLKKSPSDGSFLWRVNLDSIA---SLLDEYEI 240 (315)
T ss_pred ccchHHHHHHHHHhccccccccccHHHHHHHHHHHhc-chHHHHHHHHhcCcCCCCCceEEEeCHHHHH---HHHHHHHh
Confidence 111111111111111000 000000000001001 1111111111110000000111111111111 111110 0
Q ss_pred hhhhhhc--ccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhccccccc
Q 013862 164 AYANARL--DAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRRG 237 (435)
Q Consensus 164 ~~~~~~l--~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~~ 237 (435)
......+ ...+.||+++.|.++..++.+ ...++.+.+|+++++++++||||+|.|+|++|.+.|.+ |+.+.
T Consensus 241 ~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~-~~~~~~~~fp~~e~~~ld~aGHwVh~E~P~~~~~~i~~--Fl~~~ 313 (315)
T KOG2382|consen 241 LSYWADLEDGPYTGPVLFIKGLQSKFVPDE-HYPRMEKIFPNVEVHELDEAGHWVHLEKPEEFIESISE--FLEEP 313 (315)
T ss_pred hcccccccccccccceeEEecCCCCCcChh-HHHHHHHhccchheeecccCCceeecCCHHHHHHHHHH--Hhccc
Confidence 0111222 567899999999999999999 79999999999999999999999999999999999999 88653
|
|
| >PLN02894 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.72 E-value=9e-17 Score=152.14 Aligned_cols=65 Identities=20% Similarity=0.280 Sum_probs=53.9
Q ss_pred hhhcccccceEEEEeeCCCCCCCChhHHHHHHhhC-CCceEEEeCCCCccccccCchhHHHHHhhccccc
Q 013862 167 NARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRAL-PNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYR 235 (435)
Q Consensus 167 ~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~ 235 (435)
...+.++++|+++|+|++|.+.+ . ....+.+.. +.+++++++++||+++.|+|++|++.|.+ |++
T Consensus 318 ~~~l~~I~vP~liI~G~~D~i~~-~-~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~--~~~ 383 (402)
T PLN02894 318 LESASEWKVPTTFIYGRHDWMNY-E-GAVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLY--ACR 383 (402)
T ss_pred hhhcccCCCCEEEEEeCCCCCCc-H-HHHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHH--HHH
Confidence 45678899999999999998765 4 355555555 35899999999999999999999999998 654
|
|
| >PLN02499 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=99.72 E-value=1e-17 Score=155.17 Aligned_cols=123 Identities=16% Similarity=0.212 Sum_probs=96.1
Q ss_pred hccceecccCCCcEEeccCCCCCC---CCEEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcch
Q 013862 268 TSSVMLSTLPDGKIVRGLSGIPSE---GPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVT 344 (435)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~p~~---~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (435)
....+...+..+++++|.||+|.+ +++|+||||.|+ +|.+++...+. +++.+++ +| .+ .+
T Consensus 261 ~~~~~~~~~G~~v~V~G~e~~P~~~~~~gvL~v~NH~S~-lDp~~l~~al~----R~v~~va---y~-~~--------~l 323 (498)
T PLN02499 261 AIPYVSRIFGGKVIVKGKPPPPASGGNSGVLFVCTHRTL-MDPVVLSTVLG----RSIPAVT---YS-IS--------RL 323 (498)
T ss_pred HHHHHHHhcCceEEEEcCCCCCCcCCCCCEEEEeCCCCc-ccHHHHHHHcC----CceeehH---hh-HH--------HH
Confidence 333444455578999999999976 799999999997 56666665543 4467776 33 32 27
Q ss_pred HHHHHHhCCccccHH------HHHHHhcCCCeEEEecCccccccccCCccceeecCCchhHHHHHHHcCCCEEEEEEecc
Q 013862 345 YDTFRIMGSVPVSAI------NFYKLVSSKAHVLLYPGGVREAFHRKGEEYKLFWPESSEFVRVAAAFGGKIVPFGVVGE 418 (435)
Q Consensus 345 ~~~~~~~g~~~~~r~------~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~ivPv~~~g~ 418 (435)
++++...+.++++|+ .+.+.|++|. |+|||||||+ ++|.+.+ ||+|++.+| +|||||++.-.
T Consensus 324 s~ll~~i~avrv~R~r~~d~~air~lL~~G~-lvIFPEGTrs---reg~Llr----Fk~l~aela----~pVVPVAI~~~ 391 (498)
T PLN02499 324 SEILSPIPTVRLTRIRDVDAEKIKRELARGD-LVVCPEGTTC---REPFLLR----FSALFAELT----DRIVPVAMNYR 391 (498)
T ss_pred HHHhcccCeeeecCCchhHHHHHHHHhhCCC-EEEcCCCCCC---CCCcccc----cchhhhhhc----CceEeEEEEec
Confidence 788889999999876 6778899999 9999999999 8877666 999999888 89999998643
Q ss_pred h
Q 013862 419 D 419 (435)
Q Consensus 419 ~ 419 (435)
.
T Consensus 392 ~ 392 (498)
T PLN02499 392 V 392 (498)
T ss_pred c
Confidence 3
|
|
| >PLN02211 methyl indole-3-acetate methyltransferase | Back alignment and domain information |
|---|
Probab=99.71 E-value=7.1e-17 Score=145.21 Aligned_cols=208 Identities=13% Similarity=0.093 Sum_probs=114.3
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
+|.|..++...++++++++++.++++++.. .++++|+||||||.++..++.++|++|+++|++++...........
T Consensus 56 ~G~s~~~~~~~~~~~~~~~~l~~~i~~l~~---~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~~~- 131 (273)
T PLN02211 56 AGIDQSDADSVTTFDEYNKPLIDFLSSLPE---NEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQTDE- 131 (273)
T ss_pred CCCCCCCcccCCCHHHHHHHHHHHHHhcCC---CCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCCCCHHH-
Confidence 344433333448999999999999998753 2589999999999999999999999999999998753211000000
Q ss_pred cccccccccchhHHHHHHHHHh-hcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhh
Q 013862 82 MPIPAELMSGQMTLTLSYLLSL-LTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLK 160 (435)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (435)
.. ...... ... ....... ....... .........+............ ............... ..+.
T Consensus 132 -~~-~~~~~~-~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~ 198 (273)
T PLN02211 132 -DM-KDGVPD-LSE-FGDVYELGFGLGPDQ----PPTSAIIKKEFRRKILYQMSPQ-EDSTLAAMLLRPGPI----LALR 198 (273)
T ss_pred -HH-hccccc-hhh-hccceeeeeccCCCC----CCceeeeCHHHHHHHHhcCCCH-HHHHHHHHhcCCcCc----cccc
Confidence 00 000000 000 0000000 0000000 0000000000000000000000 000000000000000 0000
Q ss_pred hhhhhhhhhcccc-cceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhh
Q 013862 161 SASAYANARLDAV-KAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKG 230 (435)
Q Consensus 161 ~~~~~~~~~l~~i-~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~ 230 (435)
. ....+....+ ++|+++|.|++|..+|++ .++.+.+.+++.+++.++ +||.+++++|+++++.|.+
T Consensus 199 ~--~~~~~~~~~~~~vP~l~I~g~~D~~ip~~-~~~~m~~~~~~~~~~~l~-~gH~p~ls~P~~~~~~i~~ 265 (273)
T PLN02211 199 S--ARFEEETGDIDKVPRVYIKTLHDHVVKPE-QQEAMIKRWPPSQVYELE-SDHSPFFSTPFLLFGLLIK 265 (273)
T ss_pred c--ccccccccccCccceEEEEeCCCCCCCHH-HHHHHHHhCCccEEEEEC-CCCCccccCHHHHHHHHHH
Confidence 0 0111223344 789999999999999999 799999999999999997 8999999999999999988
|
|
| >PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.8e-16 Score=172.51 Aligned_cols=208 Identities=16% Similarity=0.153 Sum_probs=122.0
Q ss_pred CccccccC-------CCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccc
Q 013862 2 YGACIFQL-------QIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFR 74 (435)
Q Consensus 2 yG~s~~p~-------~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~ 74 (435)
||.|..+. ...++++++++++.+++++++. ++++|+||||||.+++.+|.++|++|+++|++++.....
T Consensus 1408 ~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~----~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~ 1483 (1655)
T PLN02980 1408 HGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITP----GKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLK 1483 (1655)
T ss_pred CCCCCCccccccccccccCCHHHHHHHHHHHHHHhCC----CCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccC
Confidence 56665442 2357899999999999999877 589999999999999999999999999999998764322
Q ss_pred ccccccccccccccccchhHHHH-----HHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCc
Q 013862 75 KSLLQTIMPIPAELMSGQMTLTL-----SYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPK 149 (435)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (435)
........ ........... ..+...+..... . ................. .....
T Consensus 1484 ~~~~~~~~----~~~~~~~~~~l~~~g~~~~~~~~~~~~~------~-~~~~~~~~~~~~~~~~~----------~~~~~ 1542 (1655)
T PLN02980 1484 DEVARKIR----SAKDDSRARMLIDHGLEIFLENWYSGEL------W-KSLRNHPHFNKIVASRL----------LHKDV 1542 (1655)
T ss_pred chHHHHHH----hhhhhHHHHHHHhhhHHHHHHHhccHHH------h-hhhccCHHHHHHHHHHH----------hcCCH
Confidence 11100000 00000000000 000000000000 0 00000000000000000 00000
Q ss_pred hhhhhHHhhhh-hhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCC------------ceEEEeCCCCccc
Q 013862 150 ETLLWKLELLK-SASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPN------------CQTRRFGGGGHFL 216 (435)
Q Consensus 150 ~~~~~~~~~~~-~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~------------~~~~~i~~~gH~~ 216 (435)
.........+. ....+..+.+.++++|+|+|+|++|..++ . ..+++.+.+++ ++++++++|||++
T Consensus 1543 ~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~-~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~ 1620 (1655)
T PLN02980 1543 PSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-Q-IAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAV 1620 (1655)
T ss_pred HHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccH-H-HHHHHHHHccccccccccccccceEEEEECCCCCch
Confidence 01111111110 01112246688999999999999999875 4 56777777765 4899999999999
Q ss_pred cccCchhHHHHHhhcccccccc
Q 013862 217 FLEDGVDLVTTIKGAGYYRRGR 238 (435)
Q Consensus 217 ~~e~pe~~~~~I~~~~Fl~~~~ 238 (435)
++|+|+++++.|.+ |+.+..
T Consensus 1621 ~lE~Pe~f~~~I~~--FL~~~~ 1640 (1655)
T PLN02980 1621 HLENPLPVIRALRK--FLTRLH 1640 (1655)
T ss_pred HHHCHHHHHHHHHH--HHHhcc
Confidence 99999999999999 997654
|
|
| >PLN02833 glycerol acyltransferase family protein | Back alignment and domain information |
|---|
Probab=99.69 E-value=6.7e-17 Score=148.11 Aligned_cols=115 Identities=10% Similarity=0.137 Sum_probs=81.9
Q ss_pred CCcEEeccCCCCCCCCEEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcchHHHHHHhCCcccc
Q 013862 278 DGKIVRGLSGIPSEGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRIMGSVPVS 357 (435)
Q Consensus 278 ~~~~~~~~~~~p~~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 357 (435)
..++++|.++.| ++++|+||||+|+ +|.+++.... + ..+++++.....+ +..+.+++..|++++|
T Consensus 150 ~~i~v~G~e~~~-~~~~IiVaNH~S~-lDi~vL~s~~----p--~~~v~kk~~~~~~-------~~~~~~~~~~g~I~Vd 214 (376)
T PLN02833 150 GVIKYHGPRPSR-RPKQVFVANHTSM-IDFIVLEQMT----P--FAVIMQKHPGWVG-------FLQNTILESVGCIWFN 214 (376)
T ss_pred EEEEEECCcCCC-CCCEEEEECCCCh-HHHHHHHhhc----C--ceEEEEehhhhhH-------HHHHHHHHHcCcEEec
Confidence 346788988776 5789999999997 6776665542 2 3445554443221 1245778899999998
Q ss_pred HH----------HHHHHhc--CCCeEEEecCccccccccCCccceeecCCchhHHHHHHHcCCCEEEEEEecc
Q 013862 358 AI----------NFYKLVS--SKAHVLLYPGGVREAFHRKGEEYKLFWPESSEFVRVAAAFGGKIVPFGVVGE 418 (435)
Q Consensus 358 r~----------~~~~~l~--~g~~~~ifPeG~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~ivPv~~~g~ 418 (435)
|+ .+.+.++ +|.+|+|||||||+ ..+...+ ||+|++ +.++||+||+|...
T Consensus 215 R~~~~~~~~~~~~l~~~l~~~~G~~llIFPEGTrs---~~~~l~~----FK~Gaf----~~g~pI~PVaI~y~ 276 (376)
T PLN02833 215 RTEAKDREVVAKKLRDHVQDPDRNPLLIFPEGTCV---NNEYTVM----FKKGAF----ELGCTVCPIAIKYN 276 (376)
T ss_pred CCCHHHHHHHHHHHHHHHHhcCCCEEEEEcCcccc---CCCcccc----cchhhH----hcCCeEEEEEEEec
Confidence 85 2233333 69999999999999 6555444 999986 45999999999744
|
|
| >PLN02652 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.5e-15 Score=142.72 Aligned_cols=208 Identities=14% Similarity=0.140 Sum_probs=121.9
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCC---ceeEEEEecCCcccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPD---MDLVLILANPATSFRKSLL 78 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~---~v~~lVli~~~~~~~~~~~ 78 (435)
||.|.-+....++++.+++|+.++++.+....++.+++|+||||||.+++.++. +|+ +++++|+.+|........
T Consensus 174 hG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~- 251 (395)
T PLN02652 174 HGGSDGLHGYVPSLDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAH- 251 (395)
T ss_pred CCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccch-
Confidence 566654444456899999999999999987666668999999999999998764 664 899999998874321100
Q ss_pred ccccccccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhh
Q 013862 79 QTIMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLEL 158 (435)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (435)
........+......................+. ........+. .. ........+....
T Consensus 252 -------------~~~~~~~~l~~~~~p~~~~~~~~~~~~~~s~~~--~~~~~~~~dp------~~-~~g~i~~~~~~~~ 309 (395)
T PLN02652 252 -------------PIVGAVAPIFSLVAPRFQFKGANKRGIPVSRDP--AALLAKYSDP------LV-YTGPIRVRTGHEI 309 (395)
T ss_pred -------------HHHHHHHHHHHHhCCCCcccCcccccCCcCCCH--HHHHHHhcCC------Cc-ccCCchHHHHHHH
Confidence 000011111111110000000000000000000 0000000000 00 0000001111111
Q ss_pred hhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCC--CceEEEeCCCCcccccc-CchhHHHHHhhccccc
Q 013862 159 LKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALP--NCQTRRFGGGGHFLFLE-DGVDLVTTIKGAGYYR 235 (435)
Q Consensus 159 ~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e-~pe~~~~~I~~~~Fl~ 235 (435)
+.. .......+.++++|+|+++|++|.++|++ .++.+.+..+ +.+++++++++|.++.| +++++.+.|.+ |++
T Consensus 310 ~~~-~~~l~~~L~~I~vPvLIi~G~~D~vvp~~-~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~--FL~ 385 (395)
T PLN02652 310 LRI-SSYLTRNFKSVTVPFMVLHGTADRVTDPL-ASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIID--WME 385 (395)
T ss_pred HHH-HHHHHhhcccCCCCEEEEEeCCCCCCCHH-HHHHHHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHH--HHH
Confidence 111 12234677889999999999999999998 6888877754 46899999999999887 78999999999 776
Q ss_pred cc
Q 013862 236 RG 237 (435)
Q Consensus 236 ~~ 237 (435)
+.
T Consensus 386 ~~ 387 (395)
T PLN02652 386 KR 387 (395)
T ss_pred HH
Confidence 44
|
|
| >smart00563 PlsC Phosphate acyltransferases | Back alignment and domain information |
|---|
Probab=99.69 E-value=9.9e-17 Score=125.38 Aligned_cols=107 Identities=25% Similarity=0.398 Sum_probs=86.8
Q ss_pred EEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcchHHHHHHhCCccccHH----------HHHH
Q 013862 294 VLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRIMGSVPVSAI----------NFYK 363 (435)
Q Consensus 294 ~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~----------~~~~ 363 (435)
+|+++||++. +|.+++...+.. ..+..++++++.+++.|+ ++.++...|.++++|. ++.+
T Consensus 1 ~i~v~NH~s~-~D~~~l~~~~~~-~~~~~~~~~~~~~~~~p~--------~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~ 70 (118)
T smart00563 1 ALVVANHQSF-LDPLVLSALLPR-KGGRVRFVAKKELFYVPL--------LGWLLRLLGAIFIDRENGRLARAALREAVR 70 (118)
T ss_pred CEEEECCCch-HHHHHHHHHccc-ccCceEEEeHHHHhhccH--------HHHHHHHCCCeEEeCCCcHHHHHHHHHHHH
Confidence 5899999995 677666666543 224689999999988865 8899999999999865 4566
Q ss_pred HhcCCCeEEEecCccccccccCCccceeecCCchhHHHHHHHcCCCEEEEEEec
Q 013862 364 LVSSKAHVLLYPGGVREAFHRKGEEYKLFWPESSEFVRVAAAFGGKIVPFGVVG 417 (435)
Q Consensus 364 ~l~~g~~~~ifPeG~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~ivPv~~~g 417 (435)
.+++|..++|||||+++ ..... .++++|++++|.++++||+||++.|
T Consensus 71 ~l~~~~~~~ifPeG~~~---~~~~~----~~~~~g~~~la~~~~~~v~Pv~~~~ 117 (118)
T smart00563 71 LLRDGGWLLIFPEGTRS---RPGKL----LPFKKGAARLALEAGVPIVPVAIRG 117 (118)
T ss_pred HHhCCCEEEEeCCcccC---CCCCc----CCCcccHHHHHHHcCCCEEeEEEec
Confidence 78899999999999987 44422 2499999999999999999999976
|
Function in phospholipid biosynthesis and have either glycerolphosphate, 1-acylglycerolphosphate, or 2-acylglycerolphosphoethanolamine acyltransferase activities. Tafazzin, the product of the gene mutated in patients with Barth syndrome, is a member of this family. |
| >PLN02511 hydrolase | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.4e-16 Score=150.26 Aligned_cols=215 Identities=10% Similarity=0.045 Sum_probs=118.6
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCc--eeEEEEecCCccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDM--DLVLILANPATSFRKSLLQ 79 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~--v~~lVli~~~~~~~~~~~~ 79 (435)
+|.|.... ..+....+++|+.+++++++...++.+++++||||||.+++.++.++|++ |.++++++++........
T Consensus 140 ~G~s~~~~-~~~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~- 217 (388)
T PLN02511 140 CADSPVTT-PQFYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADE- 217 (388)
T ss_pred CCCCCCCC-cCEEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHH-
Confidence 45554322 22334677899999999999877777999999999999999999999987 888888876643211100
Q ss_pred cccccccccccchhHHHHHHHHHhhcCChhHHHHHhhhh--ccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHh
Q 013862 80 TIMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVK--GLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLE 157 (435)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (435)
.. ...........+...+..... .....+.. ........ .......++.+.+..... .+.....
T Consensus 218 ~~----~~~~~~~y~~~~~~~l~~~~~----~~~~~~~~~~~~~~~~~~----~~~~~~~~fd~~~t~~~~--gf~~~~~ 283 (388)
T PLN02511 218 DF----HKGFNNVYDKALAKALRKIFA----KHALLFEGLGGEYNIPLV----ANAKTVRDFDDGLTRVSF--GFKSVDA 283 (388)
T ss_pred HH----hccHHHHHHHHHHHHHHHHHH----HHHHHHhhCCCccCHHHH----HhCCCHHHHHHhhhhhcC--CCCCHHH
Confidence 00 000000000000000000000 00000000 00000000 000000000000000000 0000000
Q ss_pred hhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHH-HHHHhhCCCceEEEeCCCCccccccCchh------HHHHHhh
Q 013862 158 LLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEG-DRLCRALPNCQTRRFGGGGHFLFLEDGVD------LVTTIKG 230 (435)
Q Consensus 158 ~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~-~~~~~~~~~~~~~~i~~~gH~~~~e~pe~------~~~~I~~ 230 (435)
++. .......+.+|++|+|+|+|++|++++.. .. ....+..+++++++++++||..++|+|+. +.+.+.+
T Consensus 284 yy~--~~s~~~~L~~I~vPtLiI~g~dDpi~p~~-~~~~~~~~~~p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~ 360 (388)
T PLN02511 284 YYS--NSSSSDSIKHVRVPLLCIQAANDPIAPAR-GIPREDIKANPNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVME 360 (388)
T ss_pred HHH--HcCchhhhccCCCCeEEEEcCCCCcCCcc-cCcHhHHhcCCCEEEEECCCcceeccccCCCCCCCCccHHHHHHH
Confidence 111 11124578899999999999999999987 33 45677889999999999999999999976 4888888
Q ss_pred ccccccc
Q 013862 231 AGYYRRG 237 (435)
Q Consensus 231 ~~Fl~~~ 237 (435)
|+...
T Consensus 361 --Fl~~~ 365 (388)
T PLN02511 361 --FLEAL 365 (388)
T ss_pred --HHHHH
Confidence 77544
|
|
| >TIGR03703 plsB glycerol-3-phosphate O-acyltransferase | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.6e-16 Score=158.26 Aligned_cols=122 Identities=16% Similarity=0.147 Sum_probs=96.1
Q ss_pred cCCCcEEeccCCCCC---CC-CEEEEecCCcccchhHhhhHHHhhhcCcee-eeeccccccccccCCCCCCcchHHHHHH
Q 013862 276 LPDGKIVRGLSGIPS---EG-PVLLVGNHMLLGLEALPMVPTFVIERNILV-RAIAHPMVFFNAKDGGLPDLVTYDTFRI 350 (435)
Q Consensus 276 ~~~~~~~~~~~~~p~---~~-~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (435)
.+.+++|.|.|++|. ++ |+|+|+||.|+ +|.+++...+... +... ++.++.. ++.|+ ++++++.
T Consensus 272 ly~~v~V~g~E~l~~~~~~~~pvI~vpNHrS~-lD~llL~~~l~~~-~l~~p~iaag~n-L~~p~--------~g~llr~ 340 (799)
T TIGR03703 272 LYQGINVNNADRVRKLAQKGHEIIYVPCHRSH-MDYLLLSYVLYHE-GLVPPHIAAGIN-LNFWP--------AGPIFRR 340 (799)
T ss_pred HcCceEEechhhcccccCCCCcEEEEECCCCc-hHHHHHHHHHhhc-CCCCceEEechh-hccHH--------HHHHHHH
Confidence 356799999999985 55 99999999996 6887776665533 3223 3444444 34443 8899999
Q ss_pred hCCccccHH-------------HHHHHhcCCCeEEEecCccccccccCCccceeecCCchhHHHHHHHc-------CCCE
Q 013862 351 MGSVPVSAI-------------NFYKLVSSKAHVLLYPGGVREAFHRKGEEYKLFWPESSEFVRVAAAF-------GGKI 410 (435)
Q Consensus 351 ~g~~~~~r~-------------~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~~~~~~~~g~~~~a~~~-------~~~i 410 (435)
.|+++++|+ .+.+.+++|.++.|||||||+ ++|+..+ +|.|.+++|.++ +++|
T Consensus 341 ~GaffIrR~~~~~~ly~~vl~eyi~~ll~~G~~v~iFpEGtRS---rtGkll~----pK~G~l~~a~~a~~~~~~~~v~I 413 (799)
T TIGR03703 341 GGAFFIRRSFKGNKLYSAVFREYLHELFAKGYSVEYFVEGGRS---RTGRLLP----PKTGMLAMTLQAMLRGIRRPITL 413 (799)
T ss_pred CCceEeecCCCcchhHHHHHHHHHHHHHhCCCEEEEEcCCCcC---CCCCccc----hHHHHHHHHHHHhhccCCCCcEE
Confidence 999999985 134568999999999999999 8897655 999999999888 8999
Q ss_pred EEEEE
Q 013862 411 VPFGV 415 (435)
Q Consensus 411 vPv~~ 415 (435)
|||+|
T Consensus 414 VPVsI 418 (799)
T TIGR03703 414 VPVYI 418 (799)
T ss_pred EEEEE
Confidence 99998
|
Members of this protein family are PlsB, glycerol-3-phosphate O-acyltransferase, present in E. coli and numerous related species. In many bacteria, PlsB is not found, and appears to be replaced by a two enzyme system for 1-acyl-glycerol-3-phosphate biosynthesis, the PlsX/Y system. |
| >PRK04974 glycerol-3-phosphate acyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.3e-16 Score=158.91 Aligned_cols=126 Identities=16% Similarity=0.165 Sum_probs=100.4
Q ss_pred ecccCCCcEEeccCCCCC---CC-CEEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcchHHHH
Q 013862 273 LSTLPDGKIVRGLSGIPS---EG-PVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTF 348 (435)
Q Consensus 273 ~~~~~~~~~~~~~~~~p~---~~-~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (435)
+..++.++++.|.|++|. ++ ++|+|+||.|. +|.+++...+. ..+..+..++..+.++.|+ +++++
T Consensus 279 ~~~ly~~i~V~g~e~L~~~~~~~~~vI~v~NHrS~-lD~llL~~~l~-~~gl~~p~iAagenl~~p~--------lg~ll 348 (818)
T PRK04974 279 WNRLYQGINVHNAERVRQLAQDGHEIVYVPCHRSH-MDYLLLSYVLY-HQGLVPPHIAAGINLNFWP--------AGPIF 348 (818)
T ss_pred HHHHhCceEEcchhhhhhcccCCCCEEEEeCCCCc-hHHHHHHHHHh-hcCCCCceEEehHHhcchH--------HHHHH
Confidence 333446799999999984 44 89999999996 68877666654 3344455667777776654 88999
Q ss_pred HHhCCccccHH-------------HHHHHhcCCCeEEEecCccccccccCCccceeecCCchhHHHHHHHc-------CC
Q 013862 349 RIMGSVPVSAI-------------NFYKLVSSKAHVLLYPGGVREAFHRKGEEYKLFWPESSEFVRVAAAF-------GG 408 (435)
Q Consensus 349 ~~~g~~~~~r~-------------~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~~~~~~~~g~~~~a~~~-------~~ 408 (435)
+..|+++++|+ .+.+.+++|.++.|||||||+ ++|+..+ +|.|.+++|.++ ++
T Consensus 349 r~~GaffIrR~~~~~~ly~~vl~~yi~~ll~~G~~v~iFpEGtRS---RtGkllp----pK~G~l~~a~~a~~~~~~~dv 421 (818)
T PRK04974 349 RRGGAFFIRRSFKGNKLYSTVFREYLGELFARGYSVEYFVEGGRS---RTGRLLQ----PKTGMLAMTLQAMLRGSRRPI 421 (818)
T ss_pred HHCCceEeeCCCCchHHHHHHHHHHHHHHHhCCCEEEEEcCCCcC---CCCCCcc----hhhhHHHHHHHHhhcccCCCc
Confidence 99999999986 123577899999999999999 9997655 999999999987 48
Q ss_pred CEEEEEE
Q 013862 409 KIVPFGV 415 (435)
Q Consensus 409 ~ivPv~~ 415 (435)
+||||+|
T Consensus 422 ~IVPVsI 428 (818)
T PRK04974 422 TLVPVYI 428 (818)
T ss_pred EEEEEEE
Confidence 9999988
|
|
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=99.67 E-value=9.4e-17 Score=152.79 Aligned_cols=130 Identities=18% Similarity=0.225 Sum_probs=96.9
Q ss_pred cceecccCCCcEEeccCCCCC---CCCEEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcchHH
Q 013862 270 SVMLSTLPDGKIVRGLSGIPS---EGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYD 346 (435)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~p~---~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (435)
..++.....+++++|.||+|. ++++|+||||+|+ .|.++++..+. +++.+++.. +. .+++
T Consensus 276 ~~~~~~~Gv~v~v~G~e~~p~~~~~~~~l~v~NHqS~-lD~~~l~~al~----~~~~~v~~~-~~-----------~l~~ 338 (497)
T PLN02177 276 RYNYKLLGIRLIVKGNPPPPPKKGQPGVLFVCNHRTV-LDPVVTAVALG----RKISCVTYS-IS-----------KFSE 338 (497)
T ss_pred HHHHHHcCcEEEEEcCCCCCcccCCCCeEEEECCCCc-chHHHHHHHcC----CCeEEEeeh-HH-----------HHHH
Confidence 344455557889999999995 3799999999997 57766665543 335666631 11 1677
Q ss_pred HHHHhCCccccHH------HHHHHhcCCCeEEEecCccccccccCCccceeecCCchhHHHHHHHcCCCEEEEEEecchh
Q 013862 347 TFRIMGSVPVSAI------NFYKLVSSKAHVLLYPGGVREAFHRKGEEYKLFWPESSEFVRVAAAFGGKIVPFGVVGEDD 420 (435)
Q Consensus 347 ~~~~~g~~~~~r~------~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~ivPv~~~g~~~ 420 (435)
++..+++++++|+ .+.+.|++| .++|||||||+ +++...+ ||+||+.++ +|||||+|.|..+
T Consensus 339 ~l~~i~~~~ldR~r~~~~~~~~~lL~~g-~lvIFPEGTrs---~~~~l~~----Fk~~fa~l~----~pIVPVAI~~~~~ 406 (497)
T PLN02177 339 LISPIKAVALSREREKDAANIKRLLEEG-DLVICPEGTTC---REPFLLR----FSALFAELT----DRIVPVAINTKQS 406 (497)
T ss_pred HHHhcCEEEEeCCChHHHHHHHHHHhcC-CEEECcCcCCC---CCCCcch----HHHHHHHHC----CcEEEEEEEcccc
Confidence 8889999999985 344677887 58899999998 6666555 999987777 5999999999998
Q ss_pred hhhhhhcc
Q 013862 421 LAQVIKLE 428 (435)
Q Consensus 421 ~~~~~~~~ 428 (435)
.|..-...
T Consensus 407 ~f~~~t~~ 414 (497)
T PLN02177 407 MFHGTTVR 414 (497)
T ss_pred cccccccc
Confidence 87765444
|
|
| >PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.4e-15 Score=143.98 Aligned_cols=199 Identities=19% Similarity=0.235 Sum_probs=115.4
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
+|.|.. ....++++++++++.++++.++. ++++|+||||||.+++.+|.++|++++++|++++......... ..
T Consensus 168 ~G~s~~-~~~~~~~~~~~~~~~~~~~~~~~----~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~-~~ 241 (371)
T PRK14875 168 HGASSK-AVGAGSLDELAAAVLAFLDALGI----ERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEING-DY 241 (371)
T ss_pred CCCCCC-CCCCCCHHHHHHHHHHHHHhcCC----ccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccch-hH
Confidence 355532 22457899999999999998876 4899999999999999999999999999999987643211100 00
Q ss_pred ccccccccc-chhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHH-hhh
Q 013862 82 MPIPAELMS-GQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKL-ELL 159 (435)
Q Consensus 82 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 159 (435)
...+. ......+............ ............. ...... ...+.... ..+
T Consensus 242 ----~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~-~~~~~~---------~~~~~~~~~~~~ 297 (371)
T PRK14875 242 ----IDGFVAAESRRELKPVLELLFADPA----------LVTRQMVEDLLKY-KRLDGV---------DDALRALADALF 297 (371)
T ss_pred ----HHHhhcccchhHHHHHHHHHhcChh----------hCCHHHHHHHHHH-hccccH---------HHHHHHHHHHhc
Confidence 00000 0000001111111111000 0000000000000 000000 00000000 000
Q ss_pred hh--hhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhcccccc
Q 013862 160 KS--ASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 160 ~~--~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~ 236 (435)
.. ........+.+++||+|+++|++|.+++.. ..+.+ .++.++.+++++||++++|+|+++++.|.+ |+++
T Consensus 298 ~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~-~~~~l---~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~--fl~~ 370 (371)
T PRK14875 298 AGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAA-HAQGL---PDGVAVHVLPGAGHMPQMEAAADVNRLLAE--FLGK 370 (371)
T ss_pred cCcccchhHHHHHhcCCCCEEEEEECCCCccCHH-HHhhc---cCCCeEEEeCCCCCChhhhCHHHHHHHHHH--Hhcc
Confidence 00 001223456788999999999999999877 45443 346899999999999999999999999999 8753
|
|
| >PF03982 DAGAT: Diacylglycerol acyltransferase ; InterPro: IPR007130 The terminal step of triacylglycerol (TAG) formation is catalysed by the enzyme diacylglycerol acyltransferase (DAGAT) [, ] | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.3e-16 Score=141.91 Aligned_cols=141 Identities=21% Similarity=0.268 Sum_probs=111.4
Q ss_pred CcEEeccCCCCCCCCEEEEecCC--cccchhHhhhH----HHhhhc-CceeeeeccccccccccCCCCCCcchHHHHHHh
Q 013862 279 GKIVRGLSGIPSEGPVLLVGNHM--LLGLEALPMVP----TFVIER-NILVRAIAHPMVFFNAKDGGLPDLVTYDTFRIM 351 (435)
Q Consensus 279 ~~~~~~~~~~p~~~~~i~v~nH~--~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (435)
..++...+.+++++.+|+ +.|+ .+.....+... .+.... +...+.++...+|..|+ +|+++.++
T Consensus 50 p~~l~~~~~l~p~~~Yif-~~hPHGvl~~g~~~~f~t~~~~~~~~fpg~~~~~~tl~~~f~~P~--------~R~~~~~~ 120 (297)
T PF03982_consen 50 PIRLVKTADLDPDKNYIF-GFHPHGVLPIGAFVNFATDATGFSKLFPGIRPHLLTLSVNFRIPF--------FRDFLLWL 120 (297)
T ss_pred ceEEEecccCCcCCceEE-eeCCCccccCcchhcccccccCcchhCCCcceeEEEeccceeccc--------cchhhhhc
Confidence 456777788998888777 4565 33333322211 111212 24467777778888776 99999999
Q ss_pred CCccccHHHHHHHhcC---CCeEEEecCccccccccCCccceeecCCchhHHHHHHHcCCCEEEEEEecchhhhhhhhcc
Q 013862 352 GSVPVSAINFYKLVSS---KAHVLLYPGGVREAFHRKGEEYKLFWPESSEFVRVAAAFGGKIVPFGVVGEDDLAQVIKLE 428 (435)
Q Consensus 352 g~~~~~r~~~~~~l~~---g~~~~ifPeG~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~ivPv~~~g~~~~~~~~~~~ 428 (435)
|+++++|+.+...|++ |++|+|+|+|.+++.....+.+.+.++.++||+|+|+++|+|||||+.+|++++|+++..+
T Consensus 121 G~~~~sr~s~~~~L~~~~~G~~v~ivpGG~~E~l~~~p~~~~l~lk~RkGFvklAl~~Ga~LVPv~~FGE~d~~~~~~~~ 200 (297)
T PF03982_consen 121 GAVSASRESIRYLLSRGGSGNAVVIVPGGAAEALLAHPGRERLYLKNRKGFVKLALQHGAPLVPVYSFGENDLYDQVQNP 200 (297)
T ss_pred ccccccccccceeecccCCCceeeeccCcHHHHhhcCCCceEEEECCcchHHHhHHHcCCcEEeEEEeCChhheeeccCC
Confidence 9999999999999987 5569999999999998888889999999999999999999999999999999999998664
|
; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups |
| >TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.9e-15 Score=137.59 Aligned_cols=66 Identities=23% Similarity=0.181 Sum_probs=57.0
Q ss_pred CccccccCC-CCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCc
Q 013862 2 YGACIFQLQ-IGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPAT 71 (435)
Q Consensus 2 yG~s~~p~~-~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~ 71 (435)
||.|..+.. ..++.+++++|+..++++++. ++++++||||||.+++.++.++|++|+++|++++..
T Consensus 64 ~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~~----~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~ 130 (306)
T TIGR01249 64 CGKSTPHACLEENTTWDLVADIEKLREKLGI----KNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFL 130 (306)
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHHHHHcCC----CCEEEEEECHHHHHHHHHHHHChHhhhhheeecccc
Confidence 677764432 357889999999999999877 489999999999999999999999999999998764
|
This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members. |
| >COG2267 PldB Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.7e-15 Score=136.75 Aligned_cols=203 Identities=18% Similarity=0.205 Sum_probs=119.3
Q ss_pred CChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccccch
Q 013862 13 HHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQ 92 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (435)
-+++++.+|+..+++......++.+++|+||||||.+++.++.+++..++++|+.+|......... ...
T Consensus 84 ~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~-----------~~~ 152 (298)
T COG2267 84 DSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAIL-----------RLI 152 (298)
T ss_pred hhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHH-----------HHH
Confidence 458999999999999998766788999999999999999999999999999999999965432000 000
Q ss_pred hHHHHHHHHHhhcCChhHHHHHhhhhccchhHHH--HHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhc
Q 013862 93 MTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTI--QERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARL 170 (435)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 170 (435)
.................... .. .......... .+....+... -.-........|....+...........
T Consensus 153 ~~~~~~~~~~~~~p~~~~~~-~~-~~~~~~~~~sr~~~~~~~~~~d------P~~~~~~~~~~w~~~~~~a~~~~~~~~~ 224 (298)
T COG2267 153 LARLALKLLGRIRPKLPVDS-NL-LEGVLTDDLSRDPAEVAAYEAD------PLIGVGGPVSRWVDLALLAGRVPALRDA 224 (298)
T ss_pred HHHHhcccccccccccccCc-cc-ccCcCcchhhcCHHHHHHHhcC------CccccCCccHHHHHHHHHhhcccchhcc
Confidence 00000000000000000000 00 0000000000 0000000000 0001222333444433333332223456
Q ss_pred ccccceEEEEeeCCCCCCC-ChhHHHHHHhhC--CCceEEEeCCCCccccccC-c--hhHHHHHhhccccccc
Q 013862 171 DAVKAQTLILCSGRDQLLP-SEEEGDRLCRAL--PNCQTRRFGGGGHFLFLED-G--VDLVTTIKGAGYYRRG 237 (435)
Q Consensus 171 ~~i~~Pvlii~G~~D~~~~-~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~-p--e~~~~~I~~~~Fl~~~ 237 (435)
..+++|+|+++|++|.+++ .+ ...++.+.. ++.++++++|+.|.++.|. . +++.+.+.+ |+...
T Consensus 225 ~~~~~PvLll~g~~D~vv~~~~-~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~--~l~~~ 294 (298)
T COG2267 225 PAIALPVLLLQGGDDRVVDNVE-GLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILA--WLAEA 294 (298)
T ss_pred ccccCCEEEEecCCCccccCcH-HHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHH--HHHhh
Confidence 7789999999999999999 56 455555543 5678999999999999884 3 677777777 66543
|
|
| >PRK03355 glycerol-3-phosphate acyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.6e-16 Score=154.22 Aligned_cols=122 Identities=16% Similarity=0.153 Sum_probs=93.1
Q ss_pred CCcEEeccCCCCCCCCEEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcchHHHHHHhCCcccc
Q 013862 278 DGKIVRGLSGIPSEGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRIMGSVPVS 357 (435)
Q Consensus 278 ~~~~~~~~~~~p~~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 357 (435)
+..++...+++++++|+|+|+||.|+ +|.+++...+...--...+++++.+++ .| .++++++..|+++++
T Consensus 253 ~~~~~~~lr~~~~~~~vV~vpNHrS~-lD~lll~~~l~~~gl~~~~i~Ag~~L~-~~--------~lG~llr~~Ga~fIr 322 (783)
T PRK03355 253 DEYELAALRALLEEHPAVLLFSHRSY-IDGLVVPVAMQENRLPPVHVFGGINLS-FG--------PMGPIMRRSGMIFIR 322 (783)
T ss_pred CHHHHHHHHhccCCCCEEEEECCCcc-hHHHHHHHHHhhcCCCCcEEEeHHHhc-cH--------HHHHHHHHcCcEEec
Confidence 33344556778889999999999997 688777666543211346777787764 33 388999999999999
Q ss_pred HH------------HHHHH-hcCCCeEEEecCccccccccCCccceeecCCchhHHHHHH-------HcCCCEEEEEEe
Q 013862 358 AI------------NFYKL-VSSKAHVLLYPGGVREAFHRKGEEYKLFWPESSEFVRVAA-------AFGGKIVPFGVV 416 (435)
Q Consensus 358 r~------------~~~~~-l~~g~~~~ifPeG~~~~~~~~~~~~~~~~~~~~g~~~~a~-------~~~~~ivPv~~~ 416 (435)
|+ +..+. +++|.++.+||||||+ ++|+..+ +|.|..+++. ..++|||||+|.
T Consensus 323 R~~~~~~ly~~vl~eyi~~Ll~~G~~v~iFpEGTRS---rtGkLl~----pK~Gll~~~~~a~~~~~~~~v~IVPV~I~ 394 (783)
T PRK03355 323 RNIGDDPLYKYVLREYVGYLVEKRFNLSWYIEGTRS---RTGKLLP----PKLGLLSYVADAYLDGRSDDVLLQPVSIS 394 (783)
T ss_pred CCCCchHHHHHHHHHHHHHHHhCCCeEEEEecCCCC---CCCCCCc----ccccHHHHHHHHHHhcccCCCEEEEEEEE
Confidence 95 22233 4688999999999999 9998766 9999877665 579999999997
|
|
| >cd07989 LPLAT_AGPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.2e-15 Score=129.17 Aligned_cols=127 Identities=26% Similarity=0.382 Sum_probs=103.1
Q ss_pred CCCcEEeccCCCCCCCCEEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcchHHHHHHhCCccc
Q 013862 277 PDGKIVRGLSGIPSEGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRIMGSVPV 356 (435)
Q Consensus 277 ~~~~~~~~~~~~p~~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 356 (435)
..++++.|.|+++.++++|+++||.+.. |.+++.... +.++.+++++..++.|+ +++++...|.+++
T Consensus 9 ~~~v~v~~~~~~~~~~~~i~~~nH~~~~-D~~~~~~~~----~~~~~~v~~~~~~~~~~--------~~~~~~~~g~~~v 75 (184)
T cd07989 9 GVRVRVEGLENLPPKGPVIIVANHQSYL-DPLVLGAAL----PRPIRFVAKKELFKIPF--------LGWLLRLLGAIPI 75 (184)
T ss_pred ceEEEEEccccCCCCCCEEEEECCcchH-HHHHHHhhc----cCceEEEEhHHhhhCch--------HHHHHHHCCeEEE
Confidence 4578999999999889999999999874 765544433 34578899888776665 8888999999998
Q ss_pred cHH----------HHHHHhcCCCeEEEecCccccccccCCccceeecCCchhHHHHHHHcCCCEEEEEEecchhhhh
Q 013862 357 SAI----------NFYKLVSSKAHVLLYPGGVREAFHRKGEEYKLFWPESSEFVRVAAAFGGKIVPFGVVGEDDLAQ 423 (435)
Q Consensus 357 ~r~----------~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~ivPv~~~g~~~~~~ 423 (435)
++. ++.+.+++|+.++|||||+++ ..+... ++++|.+++|+++++||+|+++.|.+..+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~l~~g~~l~i~peg~~~---~~~~~~----~~~~g~~~lA~~~~~~Vvpv~~~~~~~~~~ 145 (184)
T cd07989 76 DRGNGRSAREALREAIEALKEGESVVIFPEGTRS---RDGELL----PFKSGAFRLAKEAGVPIVPVAISGTWGSLP 145 (184)
T ss_pred ecCCchhHHHHHHHHHHHHHCCCEEEEecCcccC---CCCCcC----CCcccHHHHHHHcCCCEEeEEEeChhhhCc
Confidence 752 567888999999999999987 433333 499999999999999999999999887654
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins. |
| >KOG2984 consensus Predicted hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.1e-16 Score=125.52 Aligned_cols=192 Identities=13% Similarity=0.087 Sum_probs=123.6
Q ss_pred CccccccCCCCCChHHH---HHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccccc
Q 013862 2 YGACIFQLQIGHHFTGL---LKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLL 78 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~---a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~ 78 (435)
||.|. ||+.....+-. +++-.+++++|.. +++.++|+|=||..|+..|+++++.|.++|+.++.........
T Consensus 82 YG~Sr-PP~Rkf~~~ff~~Da~~avdLM~aLk~----~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ 156 (277)
T KOG2984|consen 82 YGTSR-PPERKFEVQFFMKDAEYAVDLMEALKL----EPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGA 156 (277)
T ss_pred CCCCC-CCcccchHHHHHHhHHHHHHHHHHhCC----CCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhH
Confidence 78875 55555554444 5566677788877 5999999999999999999999999999999987754322111
Q ss_pred ccccccccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhh
Q 013862 79 QTIMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLEL 158 (435)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (435)
.. +..+. ....+..... .+ +.....++.+. ...... .+...++......+
T Consensus 157 ma-----~kgiR-----dv~kWs~r~R-~P-------~e~~Yg~e~f~-~~wa~w---vD~v~qf~~~~dG~-------- 206 (277)
T KOG2984|consen 157 MA-----FKGIR-----DVNKWSARGR-QP-------YEDHYGPETFR-TQWAAW---VDVVDQFHSFCDGR-------- 206 (277)
T ss_pred HH-----HhchH-----HHhhhhhhhc-ch-------HHHhcCHHHHH-HHHHHH---HHHHHHHhhcCCCc--------
Confidence 00 00100 0111111000 00 00011111111 111111 11111111111111
Q ss_pred hhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhccccccc
Q 013862 159 LKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRRG 237 (435)
Q Consensus 159 ~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~~ 237 (435)
.-+-.+.+++||+||++|+.|++++.. ....+....+.+++.+.+.++|.+++.-+++|+..+.+ ||+..
T Consensus 207 ------fCr~~lp~vkcPtli~hG~kDp~~~~~-hv~fi~~~~~~a~~~~~peGkHn~hLrya~eFnklv~d--Fl~~~ 276 (277)
T KOG2984|consen 207 ------FCRLVLPQVKCPTLIMHGGKDPFCGDP-HVCFIPVLKSLAKVEIHPEGKHNFHLRYAKEFNKLVLD--FLKST 276 (277)
T ss_pred ------hHhhhcccccCCeeEeeCCcCCCCCCC-CccchhhhcccceEEEccCCCcceeeechHHHHHHHHH--HHhcc
Confidence 113568899999999999999999998 79999999999999999999999999999999999999 98753
|
|
| >KOG1455 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.63 E-value=7.1e-15 Score=126.47 Aligned_cols=195 Identities=19% Similarity=0.197 Sum_probs=120.9
Q ss_pred CChHHHHHHHHHHHHHh--hhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccccccccccccccccc
Q 013862 13 HHFTGLLKLIERTIRSE--NCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMS 90 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l--~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~ 90 (435)
.+++..++|+.++.+.. ..++++.+.+|+||||||.|++.++.++|+..+++|+++|.+....... +
T Consensus 104 ~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~k-----------p 172 (313)
T KOG1455|consen 104 PSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTK-----------P 172 (313)
T ss_pred CcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccC-----------C
Confidence 58999999999999974 4456678999999999999999999999999999999999976543321 1
Q ss_pred chhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHH-hHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhh
Q 013862 91 GQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQE-RSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANAR 169 (435)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (435)
......+..++.....................+...+. ...+.. .......+....++++... +....
T Consensus 173 ~p~v~~~l~~l~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl----------~y~g~pRl~T~~ElLr~~~-~le~~ 241 (313)
T KOG1455|consen 173 HPPVISILTLLSKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPL----------CYTGKPRLKTAYELLRVTA-DLEKN 241 (313)
T ss_pred CcHHHHHHHHHHHhCCceeecCCccccccccCCHHHHHHhhcCCc----------eecCCccHHHHHHHHHHHH-HHHHh
Confidence 11111122222222221110000000000010111111 111100 1111222333344444333 34678
Q ss_pred cccccceEEEEeeCCCCCCCChhHHHHHHhhCC--CceEEEeCCCCccccccCc----hhHHHHHhh
Q 013862 170 LDAVKAQTLILCSGRDQLLPSEEEGDRLCRALP--NCQTRRFGGGGHFLFLEDG----VDLVTTIKG 230 (435)
Q Consensus 170 l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~p----e~~~~~I~~ 230 (435)
+.++++|.+++||++|.++.+. .++.+.+..+ +.++..+||.-|.++.-.+ +.+...|.+
T Consensus 242 l~~vtvPflilHG~dD~VTDp~-~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~ 307 (313)
T KOG1455|consen 242 LNEVTVPFLILHGTDDKVTDPK-VSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIIS 307 (313)
T ss_pred cccccccEEEEecCCCcccCcH-HHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHH
Confidence 8999999999999999999999 7999998876 4589999999999986333 334444444
|
|
| >PLN02510 probable 1-acyl-sn-glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=99.63 E-value=9.3e-16 Score=140.54 Aligned_cols=118 Identities=16% Similarity=0.182 Sum_probs=91.6
Q ss_pred CCcEEeccCCCCCCCCEEEEecCCcccchhHhhhHHHhh-hcCceeeeeccccccccccCCCCCCcchHHHHHHhCCccc
Q 013862 278 DGKIVRGLSGIPSEGPVLLVGNHMLLGLEALPMVPTFVI-ERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRIMGSVPV 356 (435)
Q Consensus 278 ~~~~~~~~~~~p~~~~~i~v~nH~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 356 (435)
.++++.| |++|.++++|++|||+|. .|.+++...... .....+++++|+++++.|+ +++.+...|.|++
T Consensus 79 vkv~v~G-e~l~~~~~~IiiaNH~S~-~D~l~l~~l~~r~~~~~~~kfv~K~eL~~iP~--------~Gw~~~~~g~I~v 148 (374)
T PLN02510 79 TKVVFSG-DKVPPEERVLLIANHRTE-VDWMYLWDLALRKGCLGYIKYVLKSSLMKLPV--------FGWAFHIFEFIPV 148 (374)
T ss_pred eEEEEEe-ecCCCCCcEEEEECCCch-HHHHHHHHHHHhcCCCcccEEEEeHHHhhchH--------HHHHHHHcCCeee
Confidence 4788899 888888899999999997 566555433322 2224689999999998876 8888999999999
Q ss_pred cHH---------HHHHHhcCC---CeEEEecCccccccccCCccceeecCCchhHHHHHHHcCCCEEEEEEe
Q 013862 357 SAI---------NFYKLVSSK---AHVLLYPGGVREAFHRKGEEYKLFWPESSEFVRVAAAFGGKIVPFGVV 416 (435)
Q Consensus 357 ~r~---------~~~~~l~~g---~~~~ifPeG~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~ivPv~~~ 416 (435)
+|+ ++.+.++++ .+++|||||||. .++ .+.|+.++|.++|+||+.-++.
T Consensus 149 ~R~~~~D~~~l~~~l~~lk~~~~~~~LvIFPEGTR~---t~~--------~~~~s~~~A~k~glPil~~vL~ 209 (374)
T PLN02510 149 ERKWEVDEPNIRQMLSSFKDPRDPLWLALFPEGTDY---TEA--------KCQRSQKFAAEHGLPILNNVLL 209 (374)
T ss_pred eCCccccHHHHHHHHHHHhccCCCcEEEEeCCcCCC---Ccc--------ccchHHHHHHHcCCCcceeEEc
Confidence 985 344555543 579999999997 322 3677889999999999988774
|
|
| >KOG4321 consensus Predicted phosphate acyltransferases [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.8e-16 Score=121.80 Aligned_cols=141 Identities=22% Similarity=0.340 Sum_probs=120.3
Q ss_pred cCCCcEEeccCCCCCCCCEEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcchHHHHHHhCCcc
Q 013862 276 LPDGKIVRGLSGIPSEGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRIMGSVP 355 (435)
Q Consensus 276 ~~~~~~~~~~~~~p~~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 355 (435)
.++++|+.|.||+|++||.++|-.|...++|...+-..+...+.+.++.+.++.+|+. |+ ++.+-......|
T Consensus 28 iyhgyeviglenvpqegpalivyyhgaipidmyylnsrmllqrerliytigdrflfkl------pg--wgtiseafhvsp 99 (279)
T KOG4321|consen 28 IYHGYEVIGLENVPQEGPALIVYYHGAIPIDMYYLNSRMLLQRERLIYTIGDRFLFKL------PG--WGTISEAFHVSP 99 (279)
T ss_pred hccceeEeecccCCCcCceEEEEEcCccceeeeeechHHHHhhhhheEeecceeEEeC------CC--ccchhhhhccCC
Confidence 4589999999999999999999999977788877666666667788999999999955 44 556777778888
Q ss_pred ccHHHHHHHhcCCCeEEEecCccccccccCCccceeecCCchhHHHHHHHcCCCEEEEEEecchhhhhhh
Q 013862 356 VSAINFYKLVSSKAHVLLYPGGVREAFHRKGEEYKLFWPESSEFVRVAAAFGGKIVPFGVVGEDDLAQVI 425 (435)
Q Consensus 356 ~~r~~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~ivPv~~~g~~~~~~~~ 425 (435)
..-+.|...|+.|+.+.|-|+|.-++... ..-+++.|..+-||++.|+++++||+|++-++-.+-|.++
T Consensus 100 gtvqscvsilrdgnllaispggvyeaqfg-dhyyellwrnrvgfakvaieakapiipcftqnlregfrqv 168 (279)
T KOG4321|consen 100 GTVQSCVSILRDGNLLAISPGGVYEAQFG-DHYYELLWRNRVGFAKVAIEAKAPIIPCFTQNLREGFRQV 168 (279)
T ss_pred ccHHHHHHhhccCcEEEEcCCceeeeccc-hHHHHHHHhccccceeeeeecCCCccchhHHHHHHHHHHh
Confidence 88889999999999999999999986543 2467999999999999999999999999998888777654
|
|
| >PTZ00374 dihydroxyacetone phosphate acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=8.6e-15 Score=144.23 Aligned_cols=113 Identities=15% Similarity=0.157 Sum_probs=92.2
Q ss_pred CCCCCCCEEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcchHHHHHHhCCccccHH-------
Q 013862 287 GIPSEGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRIMGSVPVSAI------- 359 (435)
Q Consensus 287 ~~p~~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~------- 359 (435)
++| +.++|+++||.|+ +|.+++...+...--...+++++.++++.|+ ++++++..|+++++|+
T Consensus 625 ~~p-~~pvVfVpNHRS~-lDyLLLsyvL~~~GL~~P~IAAGdNLL~~P~--------LG~LLR~~GAFFIRRsf~~d~LY 694 (1108)
T PTZ00374 625 AMP-RVAVVLLPLHRSY-IDFIIMTYLLAVMGLPLPHVCAGDDFLRMGP--------IATLMRGSGAFFMRRSFRDDPLY 694 (1108)
T ss_pred cCC-CCcEEEEeCCccc-hHHHHHHHHHHhCCCCceEEEEchhhhcchH--------HHHHHHHCCeEEEeCCCCchHHH
Confidence 445 4599999999997 4887776665432213468999999988765 8999999999999886
Q ss_pred ------HHHHHhcCCCeEEEecCccccccccCCccceeecCCchhHHHHHHHc---------CCCEEEEEEe
Q 013862 360 ------NFYKLVSSKAHVLLYPGGVREAFHRKGEEYKLFWPESSEFVRVAAAF---------GGKIVPFGVV 416 (435)
Q Consensus 360 ------~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~~~~~~~~g~~~~a~~~---------~~~ivPv~~~ 416 (435)
-+.+.|++|.++.+||||||+ ++|+..+ .|.|..+++.++ +++||||+|.
T Consensus 695 sAVLreYI~~LLk~G~sVeiFpEGTRS---RTGKLLp----PK~GlLkmalda~l~g~~~v~dV~IVPVSIs 759 (1108)
T PTZ00374 695 AALFKEYVRHLVLRRRPLEFFIEGTRS---RTGKTMA----PKLGLLKFICDTFYEGQQELDDVLIIPVSLS 759 (1108)
T ss_pred HHHHHHHHHHHHhCCCeEEEecCcCcC---CCCCccc----chhhHHHHHHHHHhhcccCCCCCEEEEEEEe
Confidence 135568999999999999999 9997655 799999999987 8999999995
|
|
| >cd07990 LPLAT_LCLAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like | Back alignment and domain information |
|---|
Probab=99.56 E-value=5.5e-15 Score=125.59 Aligned_cols=117 Identities=11% Similarity=-0.006 Sum_probs=84.2
Q ss_pred CCcEEeccCCCCCCCCEEEEecCCcccchhHhhhHHHhhhc-CceeeeeccccccccccCCCCCCcchHHHHHHhCCccc
Q 013862 278 DGKIVRGLSGIPSEGPVLLVGNHMLLGLEALPMVPTFVIER-NILVRAIAHPMVFFNAKDGGLPDLVTYDTFRIMGSVPV 356 (435)
Q Consensus 278 ~~~~~~~~~~~p~~~~~i~v~nH~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 356 (435)
.++++.|.++++.++++|++|||+|. .|.+++...+.... ...+++++|.++++.|+ +++++...|.+++
T Consensus 10 ~~i~v~G~~~~~~~~~~iiv~NH~s~-~D~~~~~~~~~~~~~~~~~~~v~K~~l~~~p~--------~g~~~~~~~~i~v 80 (193)
T cd07990 10 VKVVVYGDEPKLPKERALIISNHRSE-VDWLVLWMLADRFGRLGRLKIVLKDSLKYPPL--------GGWGWQLGEFIFL 80 (193)
T ss_pred eEEEEEecCccCCCccEEEEEcCCcc-cCHHHHHHHHHHcCccceEEeeehhhhhcCCh--------hhHHHhhCeeEEE
Confidence 47889999999778899999999997 57766655543321 13588999999987765 7888888999999
Q ss_pred cHH---------HHHHHhcC---CCeEEEecCccccccccCCccceeecCCchhHHHHHHHcCCCEEEEE
Q 013862 357 SAI---------NFYKLVSS---KAHVLLYPGGVREAFHRKGEEYKLFWPESSEFVRVAAAFGGKIVPFG 414 (435)
Q Consensus 357 ~r~---------~~~~~l~~---g~~~~ifPeG~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~ivPv~ 414 (435)
+|+ ...+.+++ |.+++|||||||. .++... .+.++|.+.|+|+++-.
T Consensus 81 ~R~~~~d~~~i~~~~~~l~~~~~~~~lviFPEGTr~---~~~~~~--------~~~~~a~k~~~p~l~~v 139 (193)
T cd07990 81 KRKWEKDEKTIKRQLKRLKDSPEPFWLLIFPEGTRF---TEEKKE--------RSQEFAEKNGLPPLKHV 139 (193)
T ss_pred ECChHHhHHHHHHHHHHHhcCCCCcEEEEeCcccCC---CHHHHH--------HHHHHHHHcCCCCccee
Confidence 985 23344444 8999999999998 333221 12256666666666544
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as Lysocardiolipin acyltransferase 1 (LCLAT1) or 1-acyl-sn-glycerol-3-phosphate acyltransferase and similar proteins. |
| >PLN02588 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=99.56 E-value=9e-15 Score=135.20 Aligned_cols=119 Identities=18% Similarity=0.158 Sum_probs=85.9
Q ss_pred ecccCCCcEEeccCC--CCCCCCEEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcchHHHHHH
Q 013862 273 LSTLPDGKIVRGLSG--IPSEGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRI 350 (435)
Q Consensus 273 ~~~~~~~~~~~~~~~--~p~~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (435)
+++...+++++|... .+.++|+|+||||+|+ +|.++++..+.. +.++++ .|..|+ +++++..
T Consensus 306 ~~~~Gvrl~v~g~~p~~~~~~~gvI~V~NH~S~-LDPi~L~~Al~r---r~I~~m----tFsip~--------lg~lL~~ 369 (525)
T PLN02588 306 LAFSGIHLTLTVNDLISSDRKKGCLFVCNHRTL-LDPLYISYALRK---KNIKAV----TYSLSR--------LSELLAP 369 (525)
T ss_pred HHHcCcEEEEEeCCCCCCCCCCCEEEEECCcch-hhHHHHHHHccc---CcceEE----EEEhHH--------HHHHHHh
Confidence 334446677774432 2345799999999997 576666666521 224444 344443 7889999
Q ss_pred hCCccccHH------HHHHHhcCCCeEEEecCccccccccCCccceeecCCchhHHHHHHHcCCCEEEEEEecch
Q 013862 351 MGSVPVSAI------NFYKLVSSKAHVLLYPGGVREAFHRKGEEYKLFWPESSEFVRVAAAFGGKIVPFGVVGED 419 (435)
Q Consensus 351 ~g~~~~~r~------~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~ivPv~~~g~~ 419 (435)
++.++++|+ ++.+.+++|+ ++|||||||+ +++...+ ||+|++.+| ++||||+|.-..
T Consensus 370 i~ti~VdRdr~~D~~aI~~LLk~Gd-lVIFPEGTRs---r~g~Llr----Fk~l~A~la----~~IVPVAI~~~~ 432 (525)
T PLN02588 370 IKTVRLTRDRVKDGQAMEKLLSQGD-LVVCPEGTTC---REPYLLR----FSPLFSEVC----DVIVPVAIDSHV 432 (525)
T ss_pred cCceeecCCCcchHHHHHHHHhCCC-EEEccCcccc---CCCcccC----hhhhHHHhc----CceeeEEEEEec
Confidence 999999987 4666777777 7799999999 7777666 999998887 789999997533
|
|
| >TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.2e-13 Score=122.68 Aligned_cols=189 Identities=15% Similarity=0.066 Sum_probs=107.0
Q ss_pred CCChHHHHHHHHHHHHHhhhcCC-CCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccccccccccccccccc
Q 013862 12 GHHFTGLLKLIERTIRSENCRSS-NRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMS 90 (435)
Q Consensus 12 ~~s~~~~a~dl~~~l~~l~~~~~-~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~ 90 (435)
..+++++.+|+.++++.+....+ -++++++||||||.+++.+|.. +++|+++|+++|........
T Consensus 75 ~~~~~~~~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~~------------- 140 (274)
T TIGR03100 75 NLGFEGIDADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAAQ------------- 140 (274)
T ss_pred CCCHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCcccc-------------
Confidence 35788899999999999864322 2579999999999999999765 56899999999763211100
Q ss_pred chhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhc
Q 013862 91 GQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARL 170 (435)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 170 (435)
........+.....+. ............................ . ...... ...........+
T Consensus 141 --~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~-------~-~~~~~~------~~~~~~~~~~~l 203 (274)
T TIGR03100 141 --AASRIRHYYLGQLLSA-DFWRKLLSGEVNLGSSLRGLGDALLKAR-------Q-KGDEVA------HGGLAERMKAGL 203 (274)
T ss_pred --hHHHHHHHHHHHHhCh-HHHHHhcCCCccHHHHHHHHHHHHHhhh-------h-cCCCcc------cchHHHHHHHHH
Confidence 0001111111111111 0000000011111111111111100000 0 000000 000222334567
Q ss_pred ccccceEEEEeeCCCCCCCChhHH------HHHHhhC--CCceEEEeCCCCcccccc-CchhHHHHHhhccccc
Q 013862 171 DAVKAQTLILCSGRDQLLPSEEEG------DRLCRAL--PNCQTRRFGGGGHFLFLE-DGVDLVTTIKGAGYYR 235 (435)
Q Consensus 171 ~~i~~Pvlii~G~~D~~~~~~~~~------~~~~~~~--~~~~~~~i~~~gH~~~~e-~pe~~~~~I~~~~Fl~ 235 (435)
..+++|+++++|+.|...+. .. ..+.+.+ ++.+++.+++++|++..| .++++.+.|.+ ||+
T Consensus 204 ~~~~~P~ll~~g~~D~~~~~--~~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~--wL~ 273 (274)
T TIGR03100 204 ERFQGPVLFILSGNDLTAQE--FADSVLGEPAWRGALEDPGIERVEIDGADHTFSDRVWREWVAARTTE--WLR 273 (274)
T ss_pred HhcCCcEEEEEcCcchhHHH--HHHHhccChhhHHHhhcCCeEEEecCCCCcccccHHHHHHHHHHHHH--HHh
Confidence 77899999999999987642 22 4455544 789999999999999655 55999999999 764
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily. |
| >TIGR01607 PST-A Plasmodium subtelomeric family (PST-A) | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.2e-13 Score=125.96 Aligned_cols=200 Identities=14% Similarity=0.072 Sum_probs=111.6
Q ss_pred CChHHHHHHHHHHHHHhhh-------------------cCC-CCCEEEEEeChhHHHHHHHHHhCCC--------ceeEE
Q 013862 13 HHFTGLLKLIERTIRSENC-------------------RSS-NRPVYLVGESLGACLALAVAARNPD--------MDLVL 64 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~-------------------~~~-~~~~~lvGhS~Gg~va~~~a~~~p~--------~v~~l 64 (435)
.+++++++|+.++++.+.. .++ +.|++|+||||||.+++.++.++++ .++++
T Consensus 99 ~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~ 178 (332)
T TIGR01607 99 NCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLGKSNENNDKLNIKGC 178 (332)
T ss_pred hhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHhccccccccccccceE
Confidence 4899999999999998654 233 5789999999999999999987643 58999
Q ss_pred EEecCCccccccccccccccccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHh
Q 013862 65 ILANPATSFRKSLLQTIMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLA 144 (435)
Q Consensus 65 Vli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (435)
|+++|......... ... ..........+ ........... .. . ...........+ ..... ++ ..
T Consensus 179 i~~s~~~~i~~~~~-~~~----~~~~~~~~~l~-~~~~~~~p~~~-~~--~-~~~~~~~~~~~~---~~~~D-p~---~~ 241 (332)
T TIGR01607 179 ISLSGMISIKSVGS-DDS----FKFKYFYLPVM-NFMSRVFPTFR-IS--K-KIRYEKSPYVND---IIKFD-KF---RY 241 (332)
T ss_pred EEeccceEEecccC-CCc----chhhhhHHHHH-HHHHHHCCccc-cc--C-ccccccChhhhh---HHhcC-cc---cc
Confidence 98888753211000 000 00000000011 11111111000 00 0 000000000000 00000 00 00
Q ss_pred ccCCchhhhhHHhhhhhhhhhhhhhcccc--cceEEEEeeCCCCCCCChhHHHHHHhhC--CCceEEEeCCCCccccccC
Q 013862 145 NILPKETLLWKLELLKSASAYANARLDAV--KAQTLILCSGRDQLLPSEEEGDRLCRAL--PNCQTRRFGGGGHFLFLED 220 (435)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i--~~Pvlii~G~~D~~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~ 220 (435)
-...+..+...++.... .....+..+ ++|+|+++|++|.+++++ ..+.+.+.. ++.+++++++++|.++.|.
T Consensus 242 --~~~~s~~~~~~l~~~~~-~~~~~~~~i~~~~P~Lii~G~~D~vv~~~-~~~~~~~~~~~~~~~l~~~~g~~H~i~~E~ 317 (332)
T TIGR01607 242 --DGGITFNLASELIKATD-TLDCDIDYIPKDIPILFIHSKGDCVCSYE-GTVSFYNKLSISNKELHTLEDMDHVITIEP 317 (332)
T ss_pred --CCcccHHHHHHHHHHHH-HHHhhHhhCCCCCCEEEEEeCCCCccCHH-HHHHHHHhccCCCcEEEEECCCCCCCccCC
Confidence 00111222222222221 112344455 799999999999999998 677777654 5689999999999999985
Q ss_pred -chhHHHHHhhccccc
Q 013862 221 -GVDLVTTIKGAGYYR 235 (435)
Q Consensus 221 -pe~~~~~I~~~~Fl~ 235 (435)
++++.+.|.+ |+.
T Consensus 318 ~~~~v~~~i~~--wL~ 331 (332)
T TIGR01607 318 GNEEVLKKIIE--WIS 331 (332)
T ss_pred CHHHHHHHHHH--Hhh
Confidence 6889999988 553
|
These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii. |
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.52 E-value=6.2e-14 Score=141.04 Aligned_cols=64 Identities=16% Similarity=0.198 Sum_probs=57.2
Q ss_pred cccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhccccccc
Q 013862 170 LDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRRG 237 (435)
Q Consensus 170 l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~~ 237 (435)
+..+++|+++|+|++|.+++.. ..+.+.+..++.++++++ +||+++.|+|+++++.|.+ |+...
T Consensus 229 ~~~~~~P~lii~G~~D~~v~~~-~~~~~~~~~~~~~~~~~~-~gH~~~~e~p~~~~~~i~~--fl~~~ 292 (582)
T PRK05855 229 ERYTDVPVQLIVPTGDPYVRPA-LYDDLSRWVPRLWRREIK-AGHWLPMSHPQVLAAAVAE--FVDAV 292 (582)
T ss_pred cCCccCceEEEEeCCCcccCHH-HhccccccCCcceEEEcc-CCCcchhhChhHHHHHHHH--HHHhc
Confidence 4568999999999999999998 688888888888888887 6999999999999999999 87653
|
|
| >PRK10985 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.7e-13 Score=126.72 Aligned_cols=184 Identities=15% Similarity=0.149 Sum_probs=98.2
Q ss_pred HHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCc--eeEEEEecCCccccccccccccccccccccchhHH
Q 013862 18 LLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDM--DLVLILANPATSFRKSLLQTIMPIPAELMSGQMTL 95 (435)
Q Consensus 18 ~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~--v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (435)
..+|+..+++.+....+.++++++||||||.++..++.++++. +.++|+++++........ .+......
T Consensus 113 ~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~---------~~~~~~~~ 183 (324)
T PRK10985 113 ETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSY---------RMEQGFSR 183 (324)
T ss_pred chHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHH---------HHhhhHHH
Confidence 3567777777766544557899999999999999888887654 899999988754321110 00000000
Q ss_pred HHHHHH-HhhcCChhHHHHHhhhhcc-chhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhcccc
Q 013862 96 TLSYLL-SLLTGDPLKMAMDSIVKGL-FLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARLDAV 173 (435)
Q Consensus 96 ~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 173 (435)
.....+ ....... ........... ...+. .........+.+.... +...+....+.+.... ....+.++
T Consensus 184 ~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~~fd~~~~~--~~~g~~~~~~~y~~~~--~~~~l~~i 254 (324)
T PRK10985 184 VYQRYLLNLLKANA-ARKLAAYPGTLPINLAQ----LKSVRRLREFDDLITA--RIHGFADAIDYYRQCS--ALPLLNQI 254 (324)
T ss_pred HHHHHHHHHHHHHH-HHHHHhccccccCCHHH----HhcCCcHHHHhhhhee--ccCCCCCHHHHHHHCC--hHHHHhCC
Confidence 000000 0000000 00000000000 00000 0000000001011110 0011111122222111 23567889
Q ss_pred cceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccC
Q 013862 174 KAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLED 220 (435)
Q Consensus 174 ~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~ 220 (435)
++|+++|+|++|++++++ ..+.+.+..++.++++++++||+.++|.
T Consensus 255 ~~P~lii~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~GH~~~~~g 300 (324)
T PRK10985 255 RKPTLIIHAKDDPFMTHE-VIPKPESLPPNVEYQLTEHGGHVGFVGG 300 (324)
T ss_pred CCCEEEEecCCCCCCChh-hChHHHHhCCCeEEEECCCCCceeeCCC
Confidence 999999999999999988 6777778888999999999999999985
|
|
| >COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.2e-12 Score=116.33 Aligned_cols=214 Identities=19% Similarity=0.161 Sum_probs=132.4
Q ss_pred CCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccc--cc-------
Q 013862 11 IGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQ--TI------- 81 (435)
Q Consensus 11 ~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~--~~------- 81 (435)
..+|+.|++.....++++|+++ +=..+||-||||+.|+.++..||++|.++|.++++......... ..
T Consensus 125 P~~ti~D~V~aq~~ll~~LGI~---~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~ia~~~~~r~AI~~ 201 (368)
T COG2021 125 PVITIRDMVRAQRLLLDALGIK---KLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNIAFNEVQRQAIEA 201 (368)
T ss_pred CcccHHHHHHHHHHHHHhcCcc---eEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHHHHHHHHHHHHHh
Confidence 3478999999999999999995 34559999999999999999999999999999887643222110 00
Q ss_pred cccc-----cccccchhHHHHHHHHHhhcCChhHHHHHhhhhcc--------chhHHHHHhHHhHHhhhcchhHHhccCC
Q 013862 82 MPIP-----AELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGL--------FLQSTIQERSQDFVAMSSYLPVLANILP 148 (435)
Q Consensus 82 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (435)
.+.| .....+.....+...+..............+.+.. ..+...+.+.+... ..+...+.
T Consensus 202 DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg------~kf~~rfD 275 (368)
T COG2021 202 DPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQG------DKFVARFD 275 (368)
T ss_pred CCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHHHHH------HHHHhccC
Confidence 0000 00000111111112222221111111111111100 00112222222211 23344455
Q ss_pred chhhhhHHhhhhhhh-----hhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCce-EEEeC-CCCccccccCc
Q 013862 149 KETLLWKLELLKSAS-----AYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQ-TRRFG-GGGHFLFLEDG 221 (435)
Q Consensus 149 ~~~~~~~~~~~~~~~-----~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~-~~~i~-~~gH~~~~e~p 221 (435)
..++.+..+.+...+ .+..+.+..+++|+|++.=+.|...|++ ..+.+.+.++.+. +++|+ ..||..++...
T Consensus 276 aNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~-~~~~~~~~L~~~~~~~~i~S~~GHDaFL~e~ 354 (368)
T COG2021 276 ANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPE-LQRALAEALPAAGALREIDSPYGHDAFLVES 354 (368)
T ss_pred cchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHH-HHHHHHHhccccCceEEecCCCCchhhhcch
Confidence 555555544443222 2334568899999999999999999999 7999999998876 76665 67999999999
Q ss_pred hhHHHHHhhcccccc
Q 013862 222 VDLVTTIKGAGYYRR 236 (435)
Q Consensus 222 e~~~~~I~~~~Fl~~ 236 (435)
+.+...|.+ ||+.
T Consensus 355 ~~~~~~i~~--fL~~ 367 (368)
T COG2021 355 EAVGPLIRK--FLAL 367 (368)
T ss_pred hhhhHHHHH--Hhhc
Confidence 999999999 8864
|
|
| >COG1647 Esterase/lipase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.9e-12 Score=106.06 Aligned_cols=178 Identities=16% Similarity=0.210 Sum_probs=115.9
Q ss_pred CCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccccc
Q 013862 12 GHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSG 91 (435)
Q Consensus 12 ~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~ 91 (435)
.+++++|.+|+.+..++|... +-+.+.++|-||||.+++.+|..+| ++++|.++++....... ....
T Consensus 62 ~t~~~DW~~~v~d~Y~~L~~~-gy~eI~v~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~----------~iie 128 (243)
T COG1647 62 KTTPRDWWEDVEDGYRDLKEA-GYDEIAVVGLSMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWR----------IIIE 128 (243)
T ss_pred cCCHHHHHHHHHHHHHHHHHc-CCCeEEEEeecchhHHHHHHHhhCC--ccceeeecCCcccccch----------hhhH
Confidence 368999999999999998742 2357999999999999999999999 89999999885422111 0011
Q ss_pred hhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhcc
Q 013862 92 QMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARLD 171 (435)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 171 (435)
......+..-.. .....+............ +... ...+.....+....+.
T Consensus 129 ~~l~y~~~~kk~---------------e~k~~e~~~~e~~~~~~~-----------~~~~----~~~~~~~i~~~~~~~~ 178 (243)
T COG1647 129 GLLEYFRNAKKY---------------EGKDQEQIDKEMKSYKDT-----------PMTT----TAQLKKLIKDARRSLD 178 (243)
T ss_pred HHHHHHHHhhhc---------------cCCCHHHHHHHHHHhhcc-----------hHHH----HHHHHHHHHHHHhhhh
Confidence 111111100000 001111111212111110 0011 1111222233457788
Q ss_pred cccceEEEEeeCCCCCCCChhHHHHHHhhCC--CceEEEeCCCCcccccc-CchhHHHHHhhccccc
Q 013862 172 AVKAQTLILCSGRDQLLPSEEEGDRLCRALP--NCQTRRFGGGGHFLFLE-DGVDLVTTIKGAGYYR 235 (435)
Q Consensus 172 ~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e-~pe~~~~~I~~~~Fl~ 235 (435)
.|..|++++.|++|.++|.+ .+..+.+... ..++.+++++||.+..+ ..|.+.+.|.. ||+
T Consensus 179 ~I~~pt~vvq~~~D~mv~~~-sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~--FL~ 242 (243)
T COG1647 179 KIYSPTLVVQGRQDEMVPAE-SANFIYDHVESDDKELKWLEGSGHVITLDKERDQVEEDVIT--FLE 242 (243)
T ss_pred hcccchhheecccCCCCCHH-HHHHHHHhccCCcceeEEEccCCceeecchhHHHHHHHHHH--Hhh
Confidence 99999999999999999999 6888887764 35899999999998876 66889999998 875
|
|
| >TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.9e-12 Score=124.64 Aligned_cols=55 Identities=22% Similarity=0.249 Sum_probs=50.6
Q ss_pred hhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchh
Q 013862 168 ARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVD 223 (435)
Q Consensus 168 ~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~ 223 (435)
..+.+|++|+++|+|++|.++|++ ..+.+.+.+++.+..+++++||.+++++|..
T Consensus 409 ~dL~~I~vPvLvV~G~~D~IvP~~-sa~~l~~~i~~~~~~vL~~sGHi~~ienPp~ 463 (532)
T TIGR01838 409 LDLSKVKVPVYIIATREDHIAPWQ-SAYRGAALLGGPKTFVLGESGHIAGVVNPPS 463 (532)
T ss_pred cchhhCCCCEEEEeeCCCCcCCHH-HHHHHHHHCCCCEEEEECCCCCchHhhCCCC
Confidence 477889999999999999999998 7899999999999999999999999999863
|
This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit | Back alignment and domain information |
|---|
Probab=99.44 E-value=3.4e-12 Score=119.46 Aligned_cols=64 Identities=19% Similarity=0.192 Sum_probs=53.2
Q ss_pred CCCChHHHHH-HHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccc
Q 013862 11 IGHHFTGLLK-LIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFR 74 (435)
Q Consensus 11 ~~~s~~~~a~-dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~ 74 (435)
...++++++. ++.+.++.+....+.++++++||||||.+++.+++.+|++|+++|+++++..+.
T Consensus 110 ~~~~~~d~~~~~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~ 174 (350)
T TIGR01836 110 RYLTLDDYINGYIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFE 174 (350)
T ss_pred hcCCHHHHHHHHHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccC
Confidence 3467888875 477888877665556799999999999999999999999999999999886543
|
This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates. |
| >cd07984 LPLAT_LABLAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LABLAT-like | Back alignment and domain information |
|---|
Probab=99.44 E-value=3e-13 Score=115.37 Aligned_cols=124 Identities=16% Similarity=0.095 Sum_probs=89.2
Q ss_pred CcEEeccCCCCC----CCCEEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcchHHHHH----H
Q 013862 279 GKIVRGLSGIPS----EGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFR----I 350 (435)
Q Consensus 279 ~~~~~~~~~~p~----~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 350 (435)
+++++|.|+++. ++++|+++||.+. .|.+..+... .+.++.+++++. +.|+ +..++. .
T Consensus 3 ~~~i~~~e~l~~~~~~~~~~il~~~H~g~-~e~~~~~~~~---~~~~~~~v~~~~--~~~~--------~~~~~~~~r~~ 68 (192)
T cd07984 3 RVEREGLEHLEAALAKGKGVILLTAHFGN-WELAGLALAL---LGYPVTVVYRPL--KNPL--------LDRLITRGRER 68 (192)
T ss_pred eeEecCHHHHHHHHHcCCCEEEEcccchH-HHHHHHHHHh---cCCCeeEEEECC--CCHH--------HHHHHHHHHHh
Confidence 567888888874 5799999999976 4664444433 234477777764 3332 555554 4
Q ss_pred hCCccccHH----HHHHHhcCCCeEEEecCccccccccCC-ccce---eecCCchhHHHHHHHcCCCEEEEEEecch
Q 013862 351 MGSVPVSAI----NFYKLVSSKAHVLLYPGGVREAFHRKG-EEYK---LFWPESSEFVRVAAAFGGKIVPFGVVGED 419 (435)
Q Consensus 351 ~g~~~~~r~----~~~~~l~~g~~~~ifPeG~~~~~~~~~-~~~~---~~~~~~~g~~~~a~~~~~~ivPv~~~g~~ 419 (435)
.|..+++++ ++.+.|++|+.|+|||||+++ ..+ ...+ ..-++++|+++||.++|+||||+++.++.
T Consensus 69 ~g~~~i~~~~~~~~~~~~l~~g~~v~i~pD~~~~---~~~~~~~~F~G~~~~~~~G~~~lA~~~~~pivp~~~~~~~ 142 (192)
T cd07984 69 FGARLIPRGGGLRELIRALKKGEIVGILPDQDPG---RKGGVFVPFFGRPAATPTGPARLALKTGAPVVPAFAYRLP 142 (192)
T ss_pred cCCeeEcCCchHHHHHHHHhCCCEEEEEeCCCCC---CCCCEEeccCCCCccchHHHHHHHHHHCCcEEEEEEEEcC
Confidence 588888764 788899999999999999998 433 1111 01136999999999999999999998764
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as lipid A biosynthesis lauroyl/myristoyl (LABLAT, HtrB) acyltransferases and similar proteins. |
| >PRK05077 frsA fermentation/respiration switch protein; Reviewed | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.2e-11 Score=117.36 Aligned_cols=60 Identities=8% Similarity=0.023 Sum_probs=53.3
Q ss_pred ccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhcccccc
Q 013862 171 DAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 171 ~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~ 236 (435)
.++++|+|+|+|++|.++|.+ ..+.+.+..+++++++++++ ++.+.++++.+.+.+ ||++
T Consensus 352 ~~i~~PvLiI~G~~D~ivP~~-~a~~l~~~~~~~~l~~i~~~---~~~e~~~~~~~~i~~--wL~~ 411 (414)
T PRK05077 352 RRCPTPMLSGYWKNDPFSPEE-DSRLIASSSADGKLLEIPFK---PVYRNFDKALQEISD--WLED 411 (414)
T ss_pred cCCCCcEEEEecCCCCCCCHH-HHHHHHHhCCCCeEEEccCC---CccCCHHHHHHHHHH--HHHH
Confidence 468999999999999999999 68888999999999999986 566899999999999 6653
|
|
| >COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.37 E-value=6.5e-12 Score=112.32 Aligned_cols=200 Identities=24% Similarity=0.273 Sum_probs=108.4
Q ss_pred CCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccccc
Q 013862 12 GHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSG 91 (435)
Q Consensus 12 ~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~ 91 (435)
.++...+++++..++++++.. +++++||||||.+++.++.++|++++++|++++............... ......
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~----~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~ 142 (282)
T COG0596 68 GYSLSAYADDLAALLDALGLE----KVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPA-GAAPLA 142 (282)
T ss_pred cccHHHHHHHHHHHHHHhCCC----ceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCc-cccchh
Confidence 356666799999999999873 699999999999999999999999999999998754111110000000 000000
Q ss_pred hhHHHH-----HHHHHhhcCCh-hHHHHHhh---hhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhh
Q 013862 92 QMTLTL-----SYLLSLLTGDP-LKMAMDSI---VKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSA 162 (435)
Q Consensus 92 ~~~~~~-----~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (435)
...... ........... ........ .................. .. ...............
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~----~~~~~~~~~~~~~~~ 211 (282)
T COG0596 143 ALADLLLGLDAAAFAALLAALGLLAALAAAARAGLAEALRAPLLGAAAAAFA-------RA----ARADLAAALLALLDR 211 (282)
T ss_pred hhhhhhhccchhhhhhhhhcccccccccccchhccccccccccchhHhhhhh-------hh----cccccchhhhccccc
Confidence 000000 00000000000 00000000 000000000000000000 00 000000000000000
Q ss_pred hhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCC-ceEEEeCCCCccccccCchhHHHHHhh
Q 013862 163 SAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPN-CQTRRFGGGGHFLFLEDGVDLVTTIKG 230 (435)
Q Consensus 163 ~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~pe~~~~~I~~ 230 (435)
........+++|+++++|++|.+.+.. ....+.+..++ .++++++++||+++.|+|+.+++.+.+
T Consensus 212 --~~~~~~~~~~~P~l~i~g~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~ 277 (282)
T COG0596 212 --DLRAALARITVPTLIIHGEDDPVVPAE-LARRLAAALPNDARLVVIPGAGHFPHLEAPEAFAAALLA 277 (282)
T ss_pred --ccchhhccCCCCeEEEecCCCCcCCHH-HHHHHHhhCCCCceEEEeCCCCCcchhhcHHHHHHHHHH
Confidence 123456678899999999999777665 46777778885 899999999999999999999888887
|
|
| >PLN02380 1-acyl-sn-glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=99.32 E-value=5.2e-12 Score=115.97 Aligned_cols=126 Identities=12% Similarity=-0.058 Sum_probs=84.5
Q ss_pred CCcEEeccCCCC---CCCCEEEEecCCcccchhHhhhHHHhhh-cCceeeeeccccccccccCCCCCCcchHHHHHHhCC
Q 013862 278 DGKIVRGLSGIP---SEGPVLLVGNHMLLGLEALPMVPTFVIE-RNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRIMGS 353 (435)
Q Consensus 278 ~~~~~~~~~~~p---~~~~~i~v~nH~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 353 (435)
.++++.|.++.. .+..+|++|||+|. .|.+++.....+. .-..+++++|+++...|+ +++.+...|.
T Consensus 67 vkv~V~gd~~~~~~~g~e~~lIisNHqS~-~D~l~l~~l~~r~~~l~~~~~vlKkeL~~iPv--------~Gw~~~~~~~ 137 (376)
T PLN02380 67 VKVQLYADEETFELMGKEHALVISNHRSD-IDWLVGWILAQRSGCLGSALAVMKKSSKFLPV--------IGWSMWFSEY 137 (376)
T ss_pred eEEEEEecchhhccCCCCcEEEEECCChh-HHHHHHHHHhhhcccccceeEeeHHHhhhccH--------HHHHHHHcCC
Confidence 367788765432 23579999999997 5776554443221 013478899999987766 8888999999
Q ss_pred ccccHH---------HHHHHhcC---CCeEEEecCccccccccCCccceeecCCchhHHHHHHHcCCCE-----EEEEEe
Q 013862 354 VPVSAI---------NFYKLVSS---KAHVLLYPGGVREAFHRKGEEYKLFWPESSEFVRVAAAFGGKI-----VPFGVV 416 (435)
Q Consensus 354 ~~~~r~---------~~~~~l~~---g~~~~ifPeG~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~i-----vPv~~~ 416 (435)
++++|+ ++.+.+++ |.+++|||||||. ..++.. -..+.|.+.|.|+ .|-. .
T Consensus 138 IfIdR~~~~d~~~l~~~~~~l~~~~~~~wllIFPEGTR~---~~~k~~--------~s~~fA~~~glP~l~hvL~PRt-~ 205 (376)
T PLN02380 138 VFLERSWAKDENTLKSGFQRLKDFPRPFWLALFVEGTRF---TQAKLL--------AAQEYAASRGLPVPRNVLIPRT-K 205 (376)
T ss_pred EEecCCchhHHHHHHHHHHHHhhCCCccEEEEecCcCCC---CchhhH--------HHHHHHHHcCCCCcccccCccc-c
Confidence 999987 45566775 7899999999998 333211 1345567777776 5554 2
Q ss_pred cchhhhhh
Q 013862 417 GEDDLAQV 424 (435)
Q Consensus 417 g~~~~~~~ 424 (435)
|...+.+.
T Consensus 206 Gf~~~l~~ 213 (376)
T PLN02380 206 GFVSAVSN 213 (376)
T ss_pred cHHHHHHH
Confidence 44444443
|
|
| >PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3 | Back alignment and domain information |
|---|
Probab=99.31 E-value=3.6e-11 Score=104.57 Aligned_cols=197 Identities=16% Similarity=0.159 Sum_probs=104.6
Q ss_pred CccccccCCC-CCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccccccc
Q 013862 2 YGACIFQLQI-GHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQT 80 (435)
Q Consensus 2 yG~s~~p~~~-~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~ 80 (435)
.|++.+|.+. ..|++++++++.++++++++ +.++-+|--.|+.|-.++|..||++|.++||+++.+.....
T Consensus 68 ~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f~l----k~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw---- 139 (283)
T PF03096_consen 68 EGAATLPEGYQYPSMDQLAEMLPEVLDHFGL----KSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGW---- 139 (283)
T ss_dssp TT-----TT-----HHHHHCTHHHHHHHHT-------EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---H----
T ss_pred CCcccccccccccCHHHHHHHHHHHHHhCCc----cEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccH----
Confidence 3677777663 46999999999999999999 58999999999999999999999999999999988643221
Q ss_pred ccccccccccchhH-----------HHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCc
Q 013862 81 IMPIPAELMSGQMT-----------LTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPK 149 (435)
Q Consensus 81 ~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (435)
.++...... .....+....++.... ....+..+.+... +......
T Consensus 140 -----~Ew~~~K~~~~~L~~~gmt~~~~d~Ll~h~Fg~~~~---------~~n~Dlv~~yr~~----------l~~~~Np 195 (283)
T PF03096_consen 140 -----MEWFYQKLSSWLLYSYGMTSSVKDYLLWHYFGKEEE---------ENNSDLVQTYRQH----------LDERINP 195 (283)
T ss_dssp -----HHHHHHHHH-------CTTS-HHHHHHHHHS-HHHH---------HCT-HHHHHHHHH----------HHT-TTH
T ss_pred -----HHHHHHHHhcccccccccccchHHhhhhcccccccc---------cccHHHHHHHHHH----------HhcCCCH
Confidence 111111000 0000111111110000 0011112121111 1122222
Q ss_pred hhhhhHHhhhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCC--CceEEEeCCCCccccccCchhHHHH
Q 013862 150 ETLLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALP--NCQTRRFGGGGHFLFLEDGVDLVTT 227 (435)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~pe~~~~~ 227 (435)
..+....+.+.. ..+.........||+|++.|+..+... ....+.+++. ++++..+++||=.+..|+|+.+++.
T Consensus 196 ~Nl~~f~~sy~~-R~DL~~~~~~~~c~vLlvvG~~Sp~~~---~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea 271 (283)
T PF03096_consen 196 KNLALFLNSYNS-RTDLSIERPSLGCPVLLVVGDNSPHVD---DVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEA 271 (283)
T ss_dssp HHHHHHHHHHHT------SECTTCCS-EEEEEETTSTTHH---HHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHH
T ss_pred HHHHHHHHHHhc-cccchhhcCCCCCCeEEEEecCCcchh---hHHHHHhhcCcccceEEEecccCCcccccCcHHHHHH
Confidence 222222222211 122334556677999999999988653 3556666553 4589999999999999999999999
Q ss_pred Hhhcccccc
Q 013862 228 IKGAGYYRR 236 (435)
Q Consensus 228 I~~~~Fl~~ 236 (435)
++= |++.
T Consensus 272 ~~l--FlQG 278 (283)
T PF03096_consen 272 FKL--FLQG 278 (283)
T ss_dssp HHH--HHHH
T ss_pred HHH--HHcc
Confidence 987 7753
|
Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A. |
| >COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.30 E-value=5.5e-11 Score=99.99 Aligned_cols=177 Identities=16% Similarity=0.142 Sum_probs=103.7
Q ss_pred CChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCC---ceeEEEEecCCccccccccccccccccccc
Q 013862 13 HHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPD---MDLVLILANPATSFRKSLLQTIMPIPAELM 89 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~---~v~~lVli~~~~~~~~~~~~~~~~~~~~~~ 89 (435)
.+++++++.+..-+.. ...++|+.++||||||++|.++|.+... ...++.+.+...+.. ... .. +...
T Consensus 54 ~di~~Lad~la~el~~---~~~d~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~-~~~----~~-i~~~ 124 (244)
T COG3208 54 TDIESLADELANELLP---PLLDAPFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHY-DRG----KQ-IHHL 124 (244)
T ss_pred ccHHHHHHHHHHHhcc---ccCCCCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCC-ccc----CC-ccCC
Confidence 5788888887776663 2335799999999999999999987522 255666655443311 000 00 1111
Q ss_pred cchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhh
Q 013862 90 SGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANAR 169 (435)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (435)
. -...+..+......++. .....++..-..-.+.+. ++....+....
T Consensus 125 ~--D~~~l~~l~~lgG~p~e---------~led~El~~l~LPilRAD----------------------~~~~e~Y~~~~ 171 (244)
T COG3208 125 D--DADFLADLVDLGGTPPE---------LLEDPELMALFLPILRAD----------------------FRALESYRYPP 171 (244)
T ss_pred C--HHHHHHHHHHhCCCChH---------HhcCHHHHHHHHHHHHHH----------------------HHHhcccccCC
Confidence 1 11122222222111110 001111111111111110 00001111122
Q ss_pred cccccceEEEEeeCCCCCCCChhHHHHHHhhCC-CceEEEeCCCCccccccCchhHHHHHhhccccc
Q 013862 170 LDAVKAQTLILCSGRDQLLPSEEEGDRLCRALP-NCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYR 235 (435)
Q Consensus 170 l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~ 235 (435)
-..++||+.++.|++|..+..+ ....|.+... ..++++++| ||+...++.+++.+.|.+ .+.
T Consensus 172 ~~pl~~pi~~~~G~~D~~vs~~-~~~~W~~~t~~~f~l~~fdG-gHFfl~~~~~~v~~~i~~--~l~ 234 (244)
T COG3208 172 PAPLACPIHAFGGEKDHEVSRD-ELGAWREHTKGDFTLRVFDG-GHFFLNQQREEVLARLEQ--HLA 234 (244)
T ss_pred CCCcCcceEEeccCcchhccHH-HHHHHHHhhcCCceEEEecC-cceehhhhHHHHHHHHHH--Hhh
Confidence 3578999999999999999998 6787888776 569999995 999999999999999988 553
|
|
| >KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.2e-11 Score=104.60 Aligned_cols=150 Identities=18% Similarity=0.226 Sum_probs=106.9
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcC-CCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRS-SNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQT 80 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~-~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~ 80 (435)
||.|.-.+.+. ...+|+.++.+.|...+ ++++++|+|+|+|+..++.+|+++| ++++||.+|.....+..
T Consensus 99 yG~S~G~psE~----n~y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~rv~--- 169 (258)
T KOG1552|consen 99 YGRSSGKPSER----NLYADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGMRVA--- 169 (258)
T ss_pred ccccCCCcccc----cchhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhhhhhh---
Confidence 67765444443 66778888888887777 4789999999999999999999999 99999999884311000
Q ss_pred ccccccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhh
Q 013862 81 IMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLK 160 (435)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (435)
.. .. ... .+.+. +.
T Consensus 170 --------------------~~----~~--------~~~--------~~~d~--------------f~------------ 183 (258)
T KOG1552|consen 170 --------------------FP----DT--------KTT--------YCFDA--------------FP------------ 183 (258)
T ss_pred --------------------cc----Cc--------ceE--------Eeecc--------------cc------------
Confidence 00 00 000 00000 00
Q ss_pred hhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCc-eEEEeCCCCccccccCchhHHHHHhhccccc
Q 013862 161 SASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNC-QTRRFGGGGHFLFLEDGVDLVTTIKGAGYYR 235 (435)
Q Consensus 161 ~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~-~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~ 235 (435)
..+....++||+|+++|++|.+++.. ....+.+..++. +-.++.|+||.-..-. .++.+.+.. |+.
T Consensus 184 -----~i~kI~~i~~PVLiiHgtdDevv~~s-Hg~~Lye~~k~~~epl~v~g~gH~~~~~~-~~yi~~l~~--f~~ 250 (258)
T KOG1552|consen 184 -----NIEKISKITCPVLIIHGTDDEVVDFS-HGKALYERCKEKVEPLWVKGAGHNDIELY-PEYIEHLRR--FIS 250 (258)
T ss_pred -----ccCcceeccCCEEEEecccCceeccc-ccHHHHHhccccCCCcEEecCCCcccccC-HHHHHHHHH--HHH
Confidence 02567789999999999999999999 799999998876 7788899999875444 456666666 654
|
|
| >PRK07868 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=99.29 E-value=1e-10 Score=123.75 Aligned_cols=62 Identities=18% Similarity=0.223 Sum_probs=54.1
Q ss_pred hcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceE-EEeCCCCcccccc---CchhHHHHHhhc
Q 013862 169 RLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQT-RRFGGGGHFLFLE---DGVDLVTTIKGA 231 (435)
Q Consensus 169 ~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~-~~i~~~gH~~~~e---~pe~~~~~I~~~ 231 (435)
.+.++++|+|+|+|++|.+++++ ..+.+.+.++++++ .+++++||+.++- .++++...|.+|
T Consensus 292 ~L~~i~~P~L~i~G~~D~ivp~~-~~~~l~~~i~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~w 357 (994)
T PRK07868 292 TLADITCPVLAFVGEVDDIGQPA-SVRGIRRAAPNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADW 357 (994)
T ss_pred chhhCCCCEEEEEeCCCCCCCHH-HHHHHHHhCCCCeEEEEeCCCCCEeeeechhhhhhhChHHHHH
Confidence 57899999999999999999999 79999999999987 6789999998764 567788888883
|
|
| >PRK13604 luxD acyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.4e-10 Score=103.03 Aligned_cols=195 Identities=16% Similarity=0.120 Sum_probs=108.0
Q ss_pred CChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccccch
Q 013862 13 HHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQ 92 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (435)
.++....+|+.++++.+.... .+++.|+||||||.+|+..|... .++++|+.+|.......
T Consensus 86 ~t~s~g~~Dl~aaid~lk~~~-~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l~d~---------------- 146 (307)
T PRK13604 86 FTMSIGKNSLLTVVDWLNTRG-INNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVNLRDT---------------- 146 (307)
T ss_pred CcccccHHHHHHHHHHHHhcC-CCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcccHHHH----------------
Confidence 445556789988888886643 45899999999999997777643 39999999888642211
Q ss_pred hHHHHHHHHHhhcCChhHHHHHhhhhccchhHH-HHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhcc
Q 013862 93 MTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQST-IQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARLD 171 (435)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 171 (435)
+...+...+..+ ...... ...+ ...... ...+...... ..... .....+...
T Consensus 147 l~~~~~~~~~~~--p~~~lp-~~~d--~~g~~l~~~~f~~~~~~-----------~~~~~-----------~~s~i~~~~ 199 (307)
T PRK13604 147 LERALGYDYLSL--PIDELP-EDLD--FEGHNLGSEVFVTDCFK-----------HGWDT-----------LDSTINKMK 199 (307)
T ss_pred HHHhhhcccccC--cccccc-cccc--cccccccHHHHHHHHHh-----------cCccc-----------cccHHHHHh
Confidence 000000000000 000000 0000 000000 0000100000 00000 001124456
Q ss_pred cccceEEEEeeCCCCCCCChhHHHHHHhhCC--CceEEEeCCCCccccccCch---hHHHHHhhcccccccccccccccc
Q 013862 172 AVKAQTLILCSGRDQLLPSEEEGDRLCRALP--NCQTRRFGGGGHFLFLEDGV---DLVTTIKGAGYYRRGRIVDYVSDF 246 (435)
Q Consensus 172 ~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~pe---~~~~~I~~~~Fl~~~~~~~~~~~~ 246 (435)
++++|+|+|+|++|.++|.+ .++.+.+..+ ++++++++|++|.+. |++- .|.+.+...+---.....+...++
T Consensus 200 ~l~~PvLiIHG~~D~lVp~~-~s~~l~e~~~s~~kkl~~i~Ga~H~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (307)
T PRK13604 200 GLDIPFIAFTANNDSWVKQS-EVIDLLDSIRSEQCKLYSLIGSSHDLG-ENLVVLRNFYQSVTKAAIALDNGSLDLDVDI 277 (307)
T ss_pred hcCCCEEEEEcCCCCccCHH-HHHHHHHHhccCCcEEEEeCCCccccC-cchHHHHHHHHHHHHHHheecCCcccccccc
Confidence 67899999999999999999 7988888775 689999999999775 4442 233333332122233344566667
Q ss_pred CCCChHHHH
Q 013862 247 IPPTTIEVN 255 (435)
Q Consensus 247 ~~p~~~~~~ 255 (435)
+.|+-+.++
T Consensus 278 ~~~~~~~~~ 286 (307)
T PRK13604 278 IEPSFEDLT 286 (307)
T ss_pred cCCCHHHHH
Confidence 788766655
|
|
| >KOG0831 consensus Acyl-CoA:diacylglycerol acyltransferase (DGAT) [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.29 E-value=2.9e-12 Score=111.10 Aligned_cols=101 Identities=22% Similarity=0.298 Sum_probs=92.1
Q ss_pred ceeeeeccccccccccCCCCCCcchHHHHHHhCCccccHHHHHHHhcC---CCeEEEecCccccccccCCccceeecCCc
Q 013862 320 ILVRAIAHPMVFFNAKDGGLPDLVTYDTFRIMGSVPVSAINFYKLVSS---KAHVLLYPGGVREAFHRKGEEYKLFWPES 396 (435)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~~~l~~---g~~~~ifPeG~~~~~~~~~~~~~~~~~~~ 396 (435)
.....++....|..|| .|+++++.|.+.++|+.+...|.+ |++|+|-++|..++....+..+.+.++.+
T Consensus 135 i~~~l~tl~~~F~~P~--------~Re~l~~~Gl~svSk~s~~~~Ls~~~~Gnav~IVvGGAqEaL~s~PG~~~L~Lk~R 206 (334)
T KOG0831|consen 135 IRPKLMTLSGQFYTPF--------LREYLMSLGLCSVSRESIEYLLSKKGKGNAVVIVVGGAQEALDSHPGKNTLTLKNR 206 (334)
T ss_pred CCHHHcccccceeccH--------HHHHHHHcCCccccHHHHHHHhccCCCCCEEEEEeCchHHHHHhCCCCceEEEecc
Confidence 5577888888888877 999999999999999999988854 58999999999999888777899999999
Q ss_pred hhHHHHHHHcCCCEEEEEEecchhhhhhhhcc
Q 013862 397 SEFVRVAAAFGGKIVPFGVVGEDDLAQVIKLE 428 (435)
Q Consensus 397 ~g~~~~a~~~~~~ivPv~~~g~~~~~~~~~~~ 428 (435)
+||+|+|.++|+++||++.+|++++|++..+|
T Consensus 207 kGFVklAl~tGs~LVP~~sFGE~di~~q~~np 238 (334)
T KOG0831|consen 207 KGFVKLALQTGASLVPVFSFGENDVYKQVENP 238 (334)
T ss_pred ccHHHHHHHhCCCcCceeecccceeeeeecCC
Confidence 99999999999999999999999999998775
|
|
| >PRK11071 esterase YqiA; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=5.1e-11 Score=100.72 Aligned_cols=146 Identities=18% Similarity=0.165 Sum_probs=92.4
Q ss_pred hHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccccchhH
Q 013862 15 FTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMT 94 (435)
Q Consensus 15 ~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (435)
.+++++++.+++++++. ++++++||||||.+++.+|.++|. ++|+++|+.....
T Consensus 44 ~~~~~~~l~~l~~~~~~----~~~~lvG~S~Gg~~a~~~a~~~~~---~~vl~~~~~~~~~------------------- 97 (190)
T PRK11071 44 PADAAELLESLVLEHGG----DPLGLVGSSLGGYYATWLSQCFML---PAVVVNPAVRPFE------------------- 97 (190)
T ss_pred HHHHHHHHHHHHHHcCC----CCeEEEEECHHHHHHHHHHHHcCC---CEEEECCCCCHHH-------------------
Confidence 46888999999998876 589999999999999999999994 4688888743100
Q ss_pred HHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhccccc
Q 013862 95 LTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARLDAVK 174 (435)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 174 (435)
......... .+.. ........ .....+.. ......+. ..
T Consensus 98 -~~~~~~~~~-~~~~-----~~~~~~~~----~~~~~d~~-----------------------------~~~~~~i~-~~ 136 (190)
T PRK11071 98 -LLTDYLGEN-ENPY-----TGQQYVLE----SRHIYDLK-----------------------------VMQIDPLE-SP 136 (190)
T ss_pred -HHHHhcCCc-cccc-----CCCcEEEc----HHHHHHHH-----------------------------hcCCccCC-Ch
Confidence 000000000 0000 00000000 00011000 00011233 67
Q ss_pred ceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhccccc
Q 013862 175 AQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYR 235 (435)
Q Consensus 175 ~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~ 235 (435)
+|+++++|++|.++|.+ .+.++.+ +++.+.++|++|.. +..+++.+.+.+ |+.
T Consensus 137 ~~v~iihg~~De~V~~~-~a~~~~~---~~~~~~~~ggdH~f--~~~~~~~~~i~~--fl~ 189 (190)
T PRK11071 137 DLIWLLQQTGDEVLDYR-QAVAYYA---ACRQTVEEGGNHAF--VGFERYFNQIVD--FLG 189 (190)
T ss_pred hhEEEEEeCCCCcCCHH-HHHHHHH---hcceEEECCCCcch--hhHHHhHHHHHH--Hhc
Confidence 88999999999999999 6888777 45778899999987 455888888888 653
|
|
| >KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.5e-10 Score=99.09 Aligned_cols=205 Identities=16% Similarity=0.086 Sum_probs=120.3
Q ss_pred ccccccCC-CCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 3 GACIFQLQ-IGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 3 G~s~~p~~-~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
|+..+|.+ .-.|+++++++|..++++++. +.++-+|--.|+.|-.++|..||++|.+|||+++.+....+
T Consensus 92 gAp~~p~~y~yPsmd~LAd~l~~VL~~f~l----k~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gw----- 162 (326)
T KOG2931|consen 92 GAPSFPEGYPYPSMDDLADMLPEVLDHFGL----KSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGW----- 162 (326)
T ss_pred CCccCCCCCCCCCHHHHHHHHHHHHHhcCc----ceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchH-----
Confidence 56667765 346999999999999999999 58999999999999999999999999999999987542221
Q ss_pred cccccccccchhHHHHHHHHHh-hcCCh--hHHHHHhhhh--ccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHH
Q 013862 82 MPIPAELMSGQMTLTLSYLLSL-LTGDP--LKMAMDSIVK--GLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKL 156 (435)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (435)
.++....+ ...++.. ..... .......+.. .....+..+++...+. .......+....
T Consensus 163 ----iew~~~K~---~s~~l~~~Gmt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~----------~~~N~~Nl~~fl 225 (326)
T KOG2931|consen 163 ----IEWAYNKV---SSNLLYYYGMTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLG----------ERLNPKNLALFL 225 (326)
T ss_pred ----HHHHHHHH---HHHHHHhhchhhhHHHHHHHHHhccccccccHHHHHHHHHHHH----------hcCChhHHHHHH
Confidence 11111111 1000000 00000 0000000000 0011222222222221 122222222222
Q ss_pred hhhhhhhhh--hhhh-cccccceEEEEeeCCCCCCCChhHHHHHHhhCC--CceEEEeCCCCccccccCchhHHHHHhhc
Q 013862 157 ELLKSASAY--ANAR-LDAVKAQTLILCSGRDQLLPSEEEGDRLCRALP--NCQTRRFGGGGHFLFLEDGVDLVTTIKGA 231 (435)
Q Consensus 157 ~~~~~~~~~--~~~~-l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~pe~~~~~I~~~ 231 (435)
+.+....+. .+.. ...++||+|++.|+..+.+.. ...+...+. ++++..+.+||-.+..++|..+++.+.=
T Consensus 226 ~ayn~R~DL~~~r~~~~~tlkc~vllvvGd~Sp~~~~---vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~- 301 (326)
T KOG2931|consen 226 NAYNGRRDLSIERPKLGTTLKCPVLLVVGDNSPHVSA---VVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKY- 301 (326)
T ss_pred HHhcCCCCccccCCCcCccccccEEEEecCCCchhhh---hhhhhcccCcccceEEEEcccCCcccccCchHHHHHHHH-
Confidence 222111110 0111 125679999999999886653 444544443 5688999999999999999999999998
Q ss_pred ccccccc
Q 013862 232 GYYRRGR 238 (435)
Q Consensus 232 ~Fl~~~~ 238 (435)
|++..-
T Consensus 302 -FlqG~G 307 (326)
T KOG2931|consen 302 -FLQGMG 307 (326)
T ss_pred -HHccCC
Confidence 876543
|
|
| >PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification | Back alignment and domain information |
|---|
Probab=99.26 E-value=6.6e-11 Score=102.67 Aligned_cols=158 Identities=21% Similarity=0.224 Sum_probs=94.0
Q ss_pred HHHHHHHHHHHHHhhhcC--CCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccccchh
Q 013862 16 TGLLKLIERTIRSENCRS--SNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQM 93 (435)
Q Consensus 16 ~~~a~dl~~~l~~l~~~~--~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (435)
...++|+.+.++.+.... ..+++.++|||+||.+++.++.++|++++++|..++......... . ....
T Consensus 42 ~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~~~~~f~a~v~~~g~~d~~~~~~---------~-~~~~ 111 (213)
T PF00326_consen 42 QADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQHPDRFKAAVAGAGVSDLFSYYG---------T-TDIY 111 (213)
T ss_dssp HHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHHTCCGSSEEEEESE-SSTTCSBH---------H-TCCH
T ss_pred ccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhcccceeeeeeeccceecchhcccc---------c-cccc
Confidence 455777777777774332 246899999999999999999999999999999888753221100 0 0000
Q ss_pred HHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhccc-
Q 013862 94 TLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARLDA- 172 (435)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~- 172 (435)
. ....... ... .... ..+.... ....+.+
T Consensus 112 ~--~~~~~~~--~~~-----------~~~~----~~~~~~s-------------------------------~~~~~~~~ 141 (213)
T PF00326_consen 112 T--KAEYLEY--GDP-----------WDNP----EFYRELS-------------------------------PISPADNV 141 (213)
T ss_dssp H--HGHHHHH--SST-----------TTSH----HHHHHHH-------------------------------HGGGGGGC
T ss_pred c--ccccccc--Ccc-----------chhh----hhhhhhc-------------------------------cccccccc
Confidence 0 0000000 000 0000 0000000 0122333
Q ss_pred -ccceEEEEeeCCCCCCCChhHHHHHHhhC----CCceEEEeCCCCcccc-ccCchhHHHHHhhcccccc
Q 013862 173 -VKAQTLILCSGRDQLLPSEEEGDRLCRAL----PNCQTRRFGGGGHFLF-LEDGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 173 -i~~Pvlii~G~~D~~~~~~~~~~~~~~~~----~~~~~~~i~~~gH~~~-~e~pe~~~~~I~~~~Fl~~ 236 (435)
+++|+|+++|++|..+|.. .+.++.+.+ ...++++++++||... .+...+..+.+.+ |+++
T Consensus 142 ~~~~P~li~hG~~D~~Vp~~-~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~--f~~~ 208 (213)
T PF00326_consen 142 QIKPPVLIIHGENDPRVPPS-QSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYERILD--FFDK 208 (213)
T ss_dssp GGGSEEEEEEETTBSSSTTH-HHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHH--HHHH
T ss_pred cCCCCEEEEccCCCCccCHH-HHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHH--HHHH
Confidence 7899999999999999998 576665543 3479999999999554 3344556666666 6543
|
; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B .... |
| >PLN02872 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=99.25 E-value=2.3e-11 Score=114.04 Aligned_cols=65 Identities=17% Similarity=0.231 Sum_probs=55.2
Q ss_pred hcccc--cceEEEEeeCCCCCCCChhHHHHHHhhCCC-ceEEEeCCCCcc---ccccCchhHHHHHhhcccccc
Q 013862 169 RLDAV--KAQTLILCSGRDQLLPSEEEGDRLCRALPN-CQTRRFGGGGHF---LFLEDGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 169 ~l~~i--~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~---~~~e~pe~~~~~I~~~~Fl~~ 236 (435)
.+.++ ++|+++++|++|..+++. ..+.+.+.+++ .+++.++++||. ...|.|+++.+.|.+ |+++
T Consensus 318 ~l~~i~~~~Pv~i~~G~~D~lv~~~-dv~~l~~~Lp~~~~l~~l~~~gH~dfi~~~eape~V~~~Il~--fL~~ 388 (395)
T PLN02872 318 DLSLIPKSLPLWMGYGGTDGLADVT-DVEHTLAELPSKPELLYLENYGHIDFLLSTSAKEDVYNHMIQ--FFRS 388 (395)
T ss_pred CcccCCCCccEEEEEcCCCCCCCHH-HHHHHHHHCCCccEEEEcCCCCCHHHHhCcchHHHHHHHHHH--HHHH
Confidence 45666 589999999999999998 58888888887 588899999996 445899999999999 8763
|
|
| >KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.4e-11 Score=104.43 Aligned_cols=206 Identities=14% Similarity=0.149 Sum_probs=110.7
Q ss_pred ccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhC--CCceeEEEEecCCcccccccccc
Q 013862 3 GACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARN--PDMDLVLILANPATSFRKSLLQT 80 (435)
Q Consensus 3 G~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~--p~~v~~lVli~~~~~~~~~~~~~ 80 (435)
|-+.+...++.|.+.+++|+.++++.+-.+. +.+++||||||||.+|.+.|... |. +.++++++-.-.........
T Consensus 114 GeTk~~~e~dlS~eT~~KD~~~~i~~~fge~-~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDVVEgtAmeAL~~ 191 (343)
T KOG2564|consen 114 GETKVENEDDLSLETMSKDFGAVIKELFGEL-PPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDVVEGTAMEALNS 191 (343)
T ss_pred CccccCChhhcCHHHHHHHHHHHHHHHhccC-CCceEEEeccccchhhhhhhhhhhchh-hhceEEEEEechHHHHHHHH
Confidence 4455666778999999999999999885432 35799999999999998877653 66 89999988553211111111
Q ss_pred cccccccccc---chhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHh
Q 013862 81 IMPIPAELMS---GQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLE 157 (435)
Q Consensus 81 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (435)
.... +.+.+ ......+.+-........... ............. ....+.|..+
T Consensus 192 m~~f-L~~rP~~F~Si~~Ai~W~v~sg~~Rn~~S------ArVsmP~~~~~~~-----------------eGh~yvwrtd 247 (343)
T KOG2564|consen 192 MQHF-LRNRPKSFKSIEDAIEWHVRSGQLRNRDS------ARVSMPSQLKQCE-----------------EGHCYVWRTD 247 (343)
T ss_pred HHHH-HhcCCccccchhhHHHHHhcccccccccc------ceEecchheeecc-----------------CCCcEEEEee
Confidence 1111 11111 112222222221110000000 0000000000000 0001111111
Q ss_pred hh------hhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhc
Q 013862 158 LL------KSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGA 231 (435)
Q Consensus 158 ~~------~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~ 231 (435)
+. ..........+-...+|-++|.+..|..-..- ..- +.-..-++.+++.|||+.+.+.|..++..+..
T Consensus 248 L~kte~YW~gWF~gLS~~Fl~~p~~klLilAg~d~LDkdL-tiG---QMQGk~Q~~vL~~~GH~v~ED~P~kva~~~~~- 322 (343)
T KOG2564|consen 248 LEKTEQYWKGWFKGLSDKFLGLPVPKLLILAGVDRLDKDL-TIG---QMQGKFQLQVLPLCGHFVHEDSPHKVAECLCV- 322 (343)
T ss_pred ccccchhHHHHHhhhhhHhhCCCccceeEEecccccCcce-eee---eeccceeeeeecccCceeccCCcchHHHHHHH-
Confidence 10 11111122344456778777776666543322 111 12234589999999999999999999999999
Q ss_pred ccccccccc
Q 013862 232 GYYRRGRIV 240 (435)
Q Consensus 232 ~Fl~~~~~~ 240 (435)
|+.+++..
T Consensus 323 -f~~Rn~~~ 330 (343)
T KOG2564|consen 323 -FWIRNRFA 330 (343)
T ss_pred -HHhhhccc
Confidence 99888743
|
|
| >PRK11915 glycerol-3-phosphate acyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.17 E-value=7.1e-11 Score=113.49 Aligned_cols=114 Identities=13% Similarity=0.109 Sum_probs=85.4
Q ss_pred CCCCCCCCEEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcchHHHHHHhCCccccHH------
Q 013862 286 SGIPSEGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRIMGSVPVSAI------ 359 (435)
Q Consensus 286 ~~~p~~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~------ 359 (435)
..+.++.|+|+++||.|+ +|.+++...++...-.+.++++...++. |+++.+++..|++.+-|+
T Consensus 109 r~~~~~~pvIfvp~HrS~-lDylllsyvL~~~~l~~~~~~ag~nl~~---------~~lg~~lr~~GafFirRsf~~~~L 178 (621)
T PRK11915 109 RKLDRKATLAFAFSHRSY-LDGMLLPEVILANRLSPALTFGGANLNF---------FPMGAWAKRTGAIFIRRQTKDIPV 178 (621)
T ss_pred HHhccCCCEEEEeccccc-cHHHHHHHHHHHcCCCCceeehhhhhcc---------hhHHHHHHhCCcEEeccCCCCchH
Confidence 345668899999999998 6887777766544334455555555542 348889999999887664
Q ss_pred -------HHHHHhcCCCeEEEecCccccccccCCccceeecCCchhHHHHHH-------HcCCCEEEEEEe
Q 013862 360 -------NFYKLVSSKAHVLLYPGGVREAFHRKGEEYKLFWPESSEFVRVAA-------AFGGKIVPFGVV 416 (435)
Q Consensus 360 -------~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~~~~~~~~g~~~~a~-------~~~~~ivPv~~~ 416 (435)
.+...+++|.++.+||||+|| ++|+... -|.|...+.. ..+++||||+|.
T Consensus 179 Y~~vl~eYi~~ll~~G~~le~F~EG~RS---RtGkll~----Pk~GlLs~vv~~~~~~~~~dV~iVPVsI~ 242 (621)
T PRK11915 179 YRFVLRAYAAQLVQNHVNLTWSIEGGRT---RTGKLRP----PVFGILRYITDAVDEIDGPEVYLVPTSIV 242 (621)
T ss_pred HHHHHHHHHHHHHhCCCcEEEEeCCCCC---CCCCCCC----CchhhHHHHHHHHhcCCCCCeEEEEEEEe
Confidence 456788999999999999999 9997665 5666655444 458999999995
|
|
| >PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function | Back alignment and domain information |
|---|
Probab=99.11 E-value=8.4e-10 Score=97.08 Aligned_cols=68 Identities=13% Similarity=0.057 Sum_probs=49.1
Q ss_pred ccccCCCCCChHHHHHHHHHHHHHhhhcC----CCCCEEEEEeChhHHHHHHHHHhCC-----CceeEEEEecCCcc
Q 013862 5 CIFQLQIGHHFTGLLKLIERTIRSENCRS----SNRPVYLVGESLGACLALAVAARNP-----DMDLVLILANPATS 72 (435)
Q Consensus 5 s~~p~~~~~s~~~~a~dl~~~l~~l~~~~----~~~~~~lvGhS~Gg~va~~~a~~~p-----~~v~~lVli~~~~~ 72 (435)
|++..-...|+++-++||.++++++.... ..++++|+|||.|+.-+++|+.... ..|++.||.+|...
T Consensus 73 SSy~G~G~~SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSD 149 (303)
T PF08538_consen 73 SSYSGWGTSSLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSD 149 (303)
T ss_dssp GGBTTS-S--HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---
T ss_pred CccCCcCcchhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCC
Confidence 33444456789999999999999987752 3568999999999999999998753 57999999999854
|
This family contains many hypothetical proteins. ; PDB: 2Q0X_B. |
| >TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II | Back alignment and domain information |
|---|
Probab=99.10 E-value=5.1e-09 Score=100.09 Aligned_cols=65 Identities=11% Similarity=0.062 Sum_probs=56.6
Q ss_pred CCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHH----HHHhCCC-ceeEEEEecCCccccc
Q 013862 11 IGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALA----VAARNPD-MDLVLILANPATSFRK 75 (435)
Q Consensus 11 ~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~----~a~~~p~-~v~~lVli~~~~~~~~ 75 (435)
...+++++++.+.+.++.+....+.++++++|||+||.++.. +++++++ +|++++++.++..+..
T Consensus 263 r~~~ldDYv~~i~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~ 332 (560)
T TIGR01839 263 REWGLSTYVDALKEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTM 332 (560)
T ss_pred cCCCHHHHHHHHHHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCC
Confidence 457899999999999999987777789999999999999997 8889986 8999999988876543
|
This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >KOG2847 consensus Phosphate acyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.09 E-value=3.4e-11 Score=99.77 Aligned_cols=142 Identities=19% Similarity=0.171 Sum_probs=105.5
Q ss_pred cceecccCCCcEEeccC-------CCCCCCCEEEEecCCcccchhHhhhHHH----hhhcCceeeeeccccccccccCCC
Q 013862 270 SVMLSTLPDGKIVRGLS-------GIPSEGPVLLVGNHMLLGLEALPMVPTF----VIERNILVRAIAHPMVFFNAKDGG 338 (435)
Q Consensus 270 ~~~~~~~~~~~~~~~~~-------~~p~~~~~i~v~nH~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 338 (435)
-+++-+..++..+.+.| +=|+..|.|-|+||.|..||.++..... ...........|+...|++||
T Consensus 40 k~v~~~g~Nk~~v~n~e~l~~l~~~Rp~n~PLiTVSNH~S~vDDP~~W~~L~~~~f~~~~~~RWtlaAhdICF~n~~--- 116 (286)
T KOG2847|consen 40 KLVLMTGYNKLLVHNRETLTALLESRPPNRPLITVSNHMSCVDDPLVWGILKLRLFLNLKNIRWTLAAHDICFTNPF--- 116 (286)
T ss_pred HHHHHhcccccccccHHHHHHHHHcCCCCCCeEEEecchhccCCceeEEEechhhhcchhhhheehhhhhchhccHH---
Confidence 33334445666777765 4466789999999998767765433321 112234566677788899987
Q ss_pred CCCcchHHHHHHhCCccccHH---------HHHHHhcCCCeEEEecCccccccccCCccceeecCCchhHHHHHHHcCCC
Q 013862 339 LPDLVTYDTFRIMGSVPVSAI---------NFYKLVSSKAHVLLYPGGVREAFHRKGEEYKLFWPESSEFVRVAAAFGGK 409 (435)
Q Consensus 339 ~~~~~~~~~~~~~g~~~~~r~---------~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~ 409 (435)
...+++..-++|+.|. .|.+.|+.|.+|-|||||.+. . .+...+ .||-|..+|..++..+
T Consensus 117 -----~S~fFslGkclPi~RG~GvYQ~gmd~~i~kLn~g~WVHiFPEGkV~---q-~~~~~~--rfKWGigRlI~ea~~~ 185 (286)
T KOG2847|consen 117 -----HSNFFSLGKCLPIVRGEGVYQKGMDFAIEKLNDGSWVHIFPEGKVN---Q-MEKEML--RFKWGIGRLILEAPKP 185 (286)
T ss_pred -----HHHHHhcCceEeeeccCccccccHHHHHHhcCCCCeEEECCCceee---c-cccchh--heeccceeeeecCCCC
Confidence 7788888899999997 789999999999999999987 3 222222 2899999999998765
Q ss_pred --EEEEEEecchhhhhhh
Q 013862 410 --IVPFGVVGEDDLAQVI 425 (435)
Q Consensus 410 --ivPv~~~g~~~~~~~~ 425 (435)
|+|+...|.++++..-
T Consensus 186 PIVlPi~h~Gmedi~P~~ 203 (286)
T KOG2847|consen 186 PIVLPIWHTGMEDIMPEA 203 (286)
T ss_pred CEEeehhhhhHHHhCccC
Confidence 8899999999987654
|
|
| >PRK10566 esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=3.8e-09 Score=94.06 Aligned_cols=59 Identities=20% Similarity=0.229 Sum_probs=44.2
Q ss_pred cccc-cceEEEEeeCCCCCCCChhHHHHHHhhCCC------ceEEEeCCCCccccccCchhHHHHHhhccccc
Q 013862 170 LDAV-KAQTLILCSGRDQLLPSEEEGDRLCRALPN------CQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYR 235 (435)
Q Consensus 170 l~~i-~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~------~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~ 235 (435)
+.++ ++|+|+++|++|.+++.+ ..+.+.+.++. .++..++++||... ++ ..+.+.+ ||+
T Consensus 181 ~~~i~~~P~Lii~G~~D~~v~~~-~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~---~~-~~~~~~~--fl~ 246 (249)
T PRK10566 181 LEQLADRPLLLWHGLADDVVPAA-ESLRLQQALRERGLDKNLTCLWEPGVRHRIT---PE-ALDAGVA--FFR 246 (249)
T ss_pred hhhcCCCCEEEEEcCCCCcCCHH-HHHHHHHHHHhcCCCcceEEEecCCCCCccC---HH-HHHHHHH--HHH
Confidence 4455 689999999999999998 68888776642 46778899999863 33 4455555 665
|
|
| >PRK11460 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=2.6e-09 Score=93.50 Aligned_cols=60 Identities=10% Similarity=0.013 Sum_probs=45.5
Q ss_pred cceEEEEeeCCCCCCCChhHHHHHHhhCC----CceEEEeCCCCccccccCchhHHHHHhhcccccc
Q 013862 174 KAQTLILCSGRDQLLPSEEEGDRLCRALP----NCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 174 ~~Pvlii~G~~D~~~~~~~~~~~~~~~~~----~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~ 236 (435)
+.|+++++|++|.++|.+ ..+.+.+.+. ++++++++++||.+..+.-+.+.+-+.+ ++..
T Consensus 148 ~~pvli~hG~~D~vvp~~-~~~~~~~~L~~~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~~--~l~~ 211 (232)
T PRK11460 148 ATTIHLIHGGEDPVIDVA-HAVAAQEALISLGGDVTLDIVEDLGHAIDPRLMQFALDRLRY--TVPK 211 (232)
T ss_pred CCcEEEEecCCCCccCHH-HHHHHHHHHHHCCCCeEEEEECCCCCCCCHHHHHHHHHHHHH--Hcch
Confidence 579999999999999998 5777666543 4688889999999976655666665555 5533
|
|
| >PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic | Back alignment and domain information |
|---|
Probab=99.00 E-value=4.1e-09 Score=86.88 Aligned_cols=125 Identities=21% Similarity=0.291 Sum_probs=83.0
Q ss_pred CCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHH-HhCCCceeEEEEecCCccccccccccccccccccc
Q 013862 11 IGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVA-ARNPDMDLVLILANPATSFRKSLLQTIMPIPAELM 89 (435)
Q Consensus 11 ~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a-~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~ 89 (435)
+..+.++|.+.+.+.+..+ +++++|||||+|+..+++++ .....+|++++|++|.........
T Consensus 35 ~~P~~~~W~~~l~~~i~~~-----~~~~ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~~~~~~----------- 98 (171)
T PF06821_consen 35 DNPDLDEWVQALDQAIDAI-----DEPTILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDPDDPEPF----------- 98 (171)
T ss_dssp TS--HHHHHHHHHHCCHC------TTTEEEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SCGCHHCC-----------
T ss_pred CCCCHHHHHHHHHHHHhhc-----CCCeEEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCcccccch-----------
Confidence 3456777777777777654 35799999999999999999 777889999999998842100000
Q ss_pred cchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhh
Q 013862 90 SGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANAR 169 (435)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (435)
.. ....+. ...
T Consensus 99 ~~-------------------------------------~~~~f~--------------------------------~~p 109 (171)
T PF06821_consen 99 PP-------------------------------------ELDGFT--------------------------------PLP 109 (171)
T ss_dssp TC-------------------------------------GGCCCT--------------------------------TSH
T ss_pred hh-------------------------------------hccccc--------------------------------cCc
Confidence 00 000000 011
Q ss_pred cccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCch
Q 013862 170 LDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGV 222 (435)
Q Consensus 170 l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe 222 (435)
...+.+|.++|.+++|+++|.+ .++.+++.+ +++++.++++||+.-.+.=.
T Consensus 110 ~~~l~~~~~viaS~nDp~vp~~-~a~~~A~~l-~a~~~~~~~~GHf~~~~G~~ 160 (171)
T PF06821_consen 110 RDPLPFPSIVIASDNDPYVPFE-RAQRLAQRL-GAELIILGGGGHFNAASGFG 160 (171)
T ss_dssp CCHHHCCEEEEEETTBSSS-HH-HHHHHHHHH-T-EEEEETS-TTSSGGGTHS
T ss_pred ccccCCCeEEEEcCCCCccCHH-HHHHHHHHc-CCCeEECCCCCCcccccCCC
Confidence 1234567799999999999999 799999988 78999999999997665433
|
The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A. |
| >PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A | Back alignment and domain information |
|---|
Probab=98.95 E-value=8.5e-09 Score=83.43 Aligned_cols=103 Identities=27% Similarity=0.428 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHHhhh-cCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccccchhHH
Q 013862 17 GLLKLIERTIRSENC-RSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTL 95 (435)
Q Consensus 17 ~~a~dl~~~l~~l~~-~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (435)
...+++.++++.... ....+++.++|||+||.+++.++.++ .+++++|++++... .
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~-~~v~~~v~~~~~~~-----------~----------- 97 (145)
T PF12695_consen 41 DGADAVERVLADIRAGYPDPDRIILIGHSMGGAIAANLAARN-PRVKAVVLLSPYPD-----------S----------- 97 (145)
T ss_dssp HHSHHHHHHHHHHHHHHCTCCEEEEEEETHHHHHHHHHHHHS-TTESEEEEESESSG-----------C-----------
T ss_pred chhHHHHHHHHHHHhhcCCCCcEEEEEEccCcHHHHHHhhhc-cceeEEEEecCccc-----------h-----------
Confidence 333455555555311 11346899999999999999999998 88999999987200 0
Q ss_pred HHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhcccccc
Q 013862 96 TLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARLDAVKA 175 (435)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 175 (435)
+.+...++
T Consensus 98 ------------------------------------------------------------------------~~~~~~~~ 105 (145)
T PF12695_consen 98 ------------------------------------------------------------------------EDLAKIRI 105 (145)
T ss_dssp ------------------------------------------------------------------------HHHTTTTS
T ss_pred ------------------------------------------------------------------------hhhhccCC
Confidence 11112344
Q ss_pred eEEEEeeCCCCCCCChhHHHHHHhhCC-CceEEEeCCCCcc
Q 013862 176 QTLILCSGRDQLLPSEEEGDRLCRALP-NCQTRRFGGGGHF 215 (435)
Q Consensus 176 Pvlii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~ 215 (435)
|+++++|++|..++.+ ..+.+.+.++ +.+++++++++|+
T Consensus 106 pv~~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 106 PVLFIHGENDPLVPPE-QVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp EEEEEEETT-SSSHHH-HHHHHHHHHCSSEEEEEETTS-TT
T ss_pred cEEEEEECCCCcCCHH-HHHHHHHHcCCCcEEEEeCCCcCc
Confidence 9999999999999988 6888777666 5799999999995
|
... |
| >PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function | Back alignment and domain information |
|---|
Probab=98.93 E-value=9.8e-08 Score=85.07 Aligned_cols=62 Identities=24% Similarity=0.205 Sum_probs=55.1
Q ss_pred CCCCChHHHHHHHHHHHHHhhhcC--CCCCEEEEEeChhHHHHHHHHHhCC---CceeEEEEecCCc
Q 013862 10 QIGHHFTGLLKLIERTIRSENCRS--SNRPVYLVGESLGACLALAVAARNP---DMDLVLILANPAT 71 (435)
Q Consensus 10 ~~~~s~~~~a~dl~~~l~~l~~~~--~~~~~~lvGhS~Gg~va~~~a~~~p---~~v~~lVli~~~~ 71 (435)
.+.|++++.++--.++++++-... ++.+++|+|||.|+++++++..+++ .+|.+++++-|..
T Consensus 56 ~~~~sL~~QI~hk~~~i~~~~~~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 56 GRLFSLQDQIEHKIDFIKELIPQKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTI 122 (266)
T ss_pred CCccCHHHHHHHHHHHHHHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcc
Confidence 457999999999999999886643 5678999999999999999999999 7899999999885
|
|
| >PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Probab=98.92 E-value=4.4e-08 Score=84.43 Aligned_cols=66 Identities=18% Similarity=0.162 Sum_probs=59.2
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATS 72 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~ 72 (435)
||.+.-+++..|+-.+-..-+.++++.+++. ++++.+|||.||-.|+.+|..+| +.++++++|.+.
T Consensus 73 f~~t~~~~~~~~~n~er~~~~~~ll~~l~i~---~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~G~ 138 (297)
T PF06342_consen 73 FGFTPGYPDQQYTNEERQNFVNALLDELGIK---GKLIFLGHSRGCENALQLAVTHP--LHGLVLINPPGL 138 (297)
T ss_pred CCCCCCCcccccChHHHHHHHHHHHHHcCCC---CceEEEEeccchHHHHHHHhcCc--cceEEEecCCcc
Confidence 5666667888899999999999999999995 78999999999999999999996 679999999863
|
|
| >TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular | Back alignment and domain information |
|---|
Probab=98.89 E-value=2.1e-08 Score=93.09 Aligned_cols=60 Identities=15% Similarity=0.074 Sum_probs=50.7
Q ss_pred CCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhC-----CCceeEEEEecCCccccc
Q 013862 11 IGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARN-----PDMDLVLILANPATSFRK 75 (435)
Q Consensus 11 ~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~-----p~~v~~lVli~~~~~~~~ 75 (435)
...+++|+++.+.+++++++. +++++|+|+||..++.+++.+ |+++++++++.++..+..
T Consensus 148 ~~f~ldDYi~~l~~~i~~~G~-----~v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~ 212 (406)
T TIGR01849 148 GKFDLEDYIDYLIEFIRFLGP-----DIHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARA 212 (406)
T ss_pred CCCCHHHHHHHHHHHHHHhCC-----CCcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCC
Confidence 567999999999999998855 499999999999987776665 678999999998876654
|
This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some |
| >PLN02442 S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=98.88 E-value=2.1e-08 Score=90.64 Aligned_cols=36 Identities=25% Similarity=0.327 Sum_probs=33.6
Q ss_pred CCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCc
Q 013862 36 RPVYLVGESLGACLALAVAARNPDMDLVLILANPAT 71 (435)
Q Consensus 36 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~ 71 (435)
++++|+||||||..|+.++.++|+++++++.+++..
T Consensus 143 ~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~ 178 (283)
T PLN02442 143 SRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIA 178 (283)
T ss_pred CceEEEEEChhHHHHHHHHHhCchhEEEEEEECCcc
Confidence 579999999999999999999999999999998874
|
|
| >KOG4667 consensus Predicted esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.84 E-value=2.8e-08 Score=81.37 Aligned_cols=60 Identities=17% Similarity=0.322 Sum_probs=49.3
Q ss_pred cccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhccccc
Q 013862 172 AVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYR 235 (435)
Q Consensus 172 ~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~ 235 (435)
..+||||-++|.+|.++|.+ .+.++++.+|+-++.++||+.|..... .++.+..... |.+
T Consensus 197 d~~C~VLTvhGs~D~IVPve-~AkefAk~i~nH~L~iIEgADHnyt~~-q~~l~~lgl~--f~k 256 (269)
T KOG4667|consen 197 DKQCRVLTVHGSEDEIVPVE-DAKEFAKIIPNHKLEIIEGADHNYTGH-QSQLVSLGLE--FIK 256 (269)
T ss_pred CccCceEEEeccCCceeech-hHHHHHHhccCCceEEecCCCcCccch-hhhHhhhcce--eEE
Confidence 34799999999999999999 699999999999999999999986544 3445555555 543
|
|
| >PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases | Back alignment and domain information |
|---|
Probab=98.78 E-value=5.7e-08 Score=84.33 Aligned_cols=57 Identities=21% Similarity=0.199 Sum_probs=42.3
Q ss_pred hHHHHHHHHHHHHHhhhc-CCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCc
Q 013862 15 FTGLLKLIERTIRSENCR-SSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPAT 71 (435)
Q Consensus 15 ~~~~a~dl~~~l~~l~~~-~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~ 71 (435)
+++.++.+.++++..... .+.++++|.|.|.||++|+.++.++|+.+.++|.+++..
T Consensus 83 i~~s~~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~ 140 (216)
T PF02230_consen 83 IEESAERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYL 140 (216)
T ss_dssp HHHHHHHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---
T ss_pred HHHHHHHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccc
Confidence 445556667777654321 234689999999999999999999999999999998773
|
; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A. |
| >PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH | Back alignment and domain information |
|---|
Probab=98.78 E-value=3.3e-08 Score=85.09 Aligned_cols=36 Identities=31% Similarity=0.409 Sum_probs=31.8
Q ss_pred CCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcc
Q 013862 36 RPVYLVGESLGACLALAVAARNPDMDLVLILANPATS 72 (435)
Q Consensus 36 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~ 72 (435)
+++.|+|.|.||-+|+.+|+.+| .|+++|.++|...
T Consensus 22 ~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~ 57 (213)
T PF08840_consen 22 DKIGIIGISKGAELALLLASRFP-QISAVVAISPSSV 57 (213)
T ss_dssp SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB
T ss_pred CCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCcee
Confidence 68999999999999999999999 8999999998864
|
Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B. |
| >KOG1838 consensus Alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.76 E-value=7.3e-08 Score=88.08 Aligned_cols=187 Identities=17% Similarity=0.151 Sum_probs=98.6
Q ss_pred HHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCC---ceeEEEEecCCccccccccccccccccccccchh
Q 013862 17 GLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPD---MDLVLILANPATSFRKSLLQTIMPIPAELMSGQM 93 (435)
Q Consensus 17 ~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~---~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (435)
.+.+|+.++++++...+|..+...+|.||||.+...|..+..+ .+.++.+++|.-....... . .......
T Consensus 179 g~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~-~-----~~~~~~~- 251 (409)
T KOG1838|consen 179 GWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRS-I-----ETPLYRR- 251 (409)
T ss_pred CCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhH-H-----hcccchH-
Confidence 4578999999999999999999999999999999999987644 4566666665532200000 0 0000000
Q ss_pred HHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhcccc
Q 013862 94 TLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARLDAV 173 (435)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 173 (435)
.....+..-...................+. .......+++.+.+.... ..+....++++.. .....+.+|
T Consensus 252 --~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~----~~~~~SvreFD~~~t~~~--~gf~~~deYY~~a--Ss~~~v~~I 321 (409)
T KOG1838|consen 252 --FYNRALTLNLKRIVLRHRHTLFEDPVDFDV----ILKSRSVREFDEALTRPM--FGFKSVDEYYKKA--SSSNYVDKI 321 (409)
T ss_pred --HHHHHHHHhHHHHHhhhhhhhhhccchhhh----hhhcCcHHHHHhhhhhhh--cCCCcHHHHHhhc--chhhhcccc
Confidence 000100000000000000000000000000 000011111111111000 0001111112111 124578899
Q ss_pred cceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccC
Q 013862 174 KAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLED 220 (435)
Q Consensus 174 ~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~ 220 (435)
++|+|+|.+.+|+++|....-.......|+.-+++-..+||..++|.
T Consensus 322 ~VP~L~ina~DDPv~p~~~ip~~~~~~np~v~l~~T~~GGHlgfleg 368 (409)
T KOG1838|consen 322 KVPLLCINAADDPVVPEEAIPIDDIKSNPNVLLVITSHGGHLGFLEG 368 (409)
T ss_pred cccEEEEecCCCCCCCcccCCHHHHhcCCcEEEEEeCCCceeeeecc
Confidence 99999999999999999634455666778888888888999999986
|
|
| >COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.73 E-value=5.4e-08 Score=85.68 Aligned_cols=53 Identities=28% Similarity=0.362 Sum_probs=45.1
Q ss_pred hhhcccccceEEEEeeCCCCCCCChhHHHHHHh-hCCCceEEEeCCCCccccccC
Q 013862 167 NARLDAVKAQTLILCSGRDQLLPSEEEGDRLCR-ALPNCQTRRFGGGGHFLFLED 220 (435)
Q Consensus 167 ~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~-~~~~~~~~~i~~~gH~~~~e~ 220 (435)
...+.+|.+|+|+|++.+|++++++ ....... ..|+..+..-+.+||..++..
T Consensus 267 ~~~L~~Ir~PtLii~A~DDP~~~~~-~iP~~~~~~np~v~l~~t~~GGHvGfl~~ 320 (345)
T COG0429 267 LPLLPKIRKPTLIINAKDDPFMPPE-VIPKLQEMLNPNVLLQLTEHGGHVGFLGG 320 (345)
T ss_pred cccccccccceEEEecCCCCCCChh-hCCcchhcCCCceEEEeecCCceEEeccC
Confidence 3578899999999999999999997 4655555 778889999999999998883
|
|
| >COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.72 E-value=2.3e-07 Score=84.32 Aligned_cols=63 Identities=16% Similarity=0.211 Sum_probs=50.3
Q ss_pred CChHHHH-HHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCc-eeEEEEecCCccccc
Q 013862 13 HHFTGLL-KLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDM-DLVLILANPATSFRK 75 (435)
Q Consensus 13 ~s~~~~a-~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~-v~~lVli~~~~~~~~ 75 (435)
.++++++ +++.+.++......+.+++.++|||.||.++..+++.++.+ |+++++..+...+..
T Consensus 157 ~~~edYi~e~l~~aid~v~~itg~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~ 221 (445)
T COG3243 157 KNLEDYILEGLSEAIDTVKDITGQKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSH 221 (445)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhCccccceeeEecchHHHHHHHHhhhhcccccceeeecchhhcc
Confidence 5677777 67776666665545557999999999999999999999887 999999887765543
|
|
| >TIGR02821 fghA_ester_D S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=98.69 E-value=4e-07 Score=82.12 Aligned_cols=57 Identities=18% Similarity=0.216 Sum_probs=45.2
Q ss_pred CChHHH-HHHHHHHHHHh-hhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCc
Q 013862 13 HHFTGL-LKLIERTIRSE-NCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPAT 71 (435)
Q Consensus 13 ~s~~~~-a~dl~~~l~~l-~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~ 71 (435)
+++.++ ++++..++++. +. ..++++++||||||.+|+.++.++|+.+++++++++..
T Consensus 115 ~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~ 173 (275)
T TIGR02821 115 YRMYSYIVQELPALVAAQFPL--DGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIV 173 (275)
T ss_pred chHHHHHHHHHHHHHHhhCCC--CCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCcc
Confidence 344444 57777777763 22 13589999999999999999999999999999998874
|
This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well. |
| >KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.68 E-value=4.3e-08 Score=80.29 Aligned_cols=164 Identities=18% Similarity=0.156 Sum_probs=106.9
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhc--CCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCR--SSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQ 79 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~--~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~ 79 (435)
||.|.-.| |-+.+.-|-+++++++-.+ ....+++|.|-|.||.+|..+|+++.+++.++|+-+..........
T Consensus 117 YG~S~Gsp----sE~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i- 191 (300)
T KOG4391|consen 117 YGKSEGSP----SEEGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAI- 191 (300)
T ss_pred cccCCCCc----cccceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhh-
Confidence 56654333 3334455666777776442 2356899999999999999999999999999998887643211110
Q ss_pred cccccccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhh
Q 013862 80 TIMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELL 159 (435)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (435)
..........+.. ...++..
T Consensus 192 -------~~v~p~~~k~i~~----------------------------lc~kn~~------------------------- 211 (300)
T KOG4391|consen 192 -------PLVFPFPMKYIPL----------------------------LCYKNKW------------------------- 211 (300)
T ss_pred -------heeccchhhHHHH----------------------------HHHHhhh-------------------------
Confidence 0000000000000 0000000
Q ss_pred hhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCC--ceEEEeCCCCccccccCchhHHHHHhhccccccc
Q 013862 160 KSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPN--CQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRRG 237 (435)
Q Consensus 160 ~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~~ 237 (435)
.....+.+.+.|.|++.|..|.++|+. +.+.+.+..|. .++.++|++.|.-.+- -+...++|.+ |+.+.
T Consensus 212 -----~S~~ki~~~~~P~LFiSGlkDelVPP~-~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i-~dGYfq~i~d--FlaE~ 282 (300)
T KOG4391|consen 212 -----LSYRKIGQCRMPFLFISGLKDELVPPV-MMRQLYELCPSRTKRLAEFPDGTHNDTWI-CDGYFQAIED--FLAEV 282 (300)
T ss_pred -----cchhhhccccCceEEeecCccccCCcH-HHHHHHHhCchhhhhheeCCCCccCceEE-eccHHHHHHH--HHHHh
Confidence 001334466889999999999999999 89999999885 4899999999976544 3567788888 88776
Q ss_pred cc
Q 013862 238 RI 239 (435)
Q Consensus 238 ~~ 239 (435)
..
T Consensus 283 ~~ 284 (300)
T KOG4391|consen 283 VK 284 (300)
T ss_pred cc
Confidence 54
|
|
| >COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.66 E-value=8.6e-08 Score=96.20 Aligned_cols=62 Identities=24% Similarity=0.336 Sum_probs=48.0
Q ss_pred hhcccccceEEEEeeCCCCCCCChhHHHHHHhhCC----CceEEEeCCCCccccc-cCchhHHHHHhh
Q 013862 168 ARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALP----NCQTRRFGGGGHFLFL-EDGVDLVTTIKG 230 (435)
Q Consensus 168 ~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~----~~~~~~i~~~gH~~~~-e~pe~~~~~I~~ 230 (435)
....++++|+|+|||++|..++.+ ++..+.+.+. ..+++++|+.||.+.- ++-..+.+.+.+
T Consensus 545 ~~~~~i~~P~LliHG~~D~~v~~~-q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~ 611 (620)
T COG1506 545 FYADNIKTPLLLIHGEEDDRVPIE-QAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEILD 611 (620)
T ss_pred hhhcccCCCEEEEeecCCccCChH-HHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHHH
Confidence 345688999999999999999998 6777766543 5699999999999876 344445555555
|
|
| >TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.7e-07 Score=83.00 Aligned_cols=68 Identities=24% Similarity=0.172 Sum_probs=54.8
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPAT 71 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~ 71 (435)
||.|.-+. ...+++++++|+..+++.+... ..++++|+||||||.+++.+|.++|++++++|+++|..
T Consensus 67 ~G~S~g~~-~~~~~~~~~~Dv~~ai~~L~~~-~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~ 134 (266)
T TIGR03101 67 CGDSAGDF-AAARWDVWKEDVAAAYRWLIEQ-GHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVV 134 (266)
T ss_pred CCCCCCcc-ccCCHHHHHHHHHHHHHHHHhc-CCCCEEEEEECHHHHHHHHHHHhCccccceEEEecccc
Confidence 45554332 2468889999999887777543 24689999999999999999999999999999999874
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily. |
| >PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics [] | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.3e-06 Score=76.73 Aligned_cols=58 Identities=24% Similarity=0.268 Sum_probs=47.0
Q ss_pred CCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhC---CCceeEEEEecCCcc
Q 013862 12 GHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARN---PDMDLVLILANPATS 72 (435)
Q Consensus 12 ~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~---p~~v~~lVli~~~~~ 72 (435)
..|+++++++..+.|..... +.|++|+|||+||.+|.++|.+- ...|..++++|+..+
T Consensus 45 ~~si~~la~~y~~~I~~~~~---~gp~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p 105 (229)
T PF00975_consen 45 PDSIEELASRYAEAIRARQP---EGPYVLAGWSFGGILAFEMARQLEEAGEEVSRLILIDSPPP 105 (229)
T ss_dssp ESSHHHHHHHHHHHHHHHTS---SSSEEEEEETHHHHHHHHHHHHHHHTT-SESEEEEESCSST
T ss_pred CCCHHHHHHHHHHHhhhhCC---CCCeeehccCccHHHHHHHHHHHHHhhhccCceEEecCCCC
Confidence 36899999988888877655 35999999999999999999753 456999999997643
|
Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A .... |
| >PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway | Back alignment and domain information |
|---|
Probab=98.57 E-value=5.9e-07 Score=78.16 Aligned_cols=116 Identities=20% Similarity=0.167 Sum_probs=76.3
Q ss_pred hHHHHHHHHHHHHHhhhcC--CCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccccch
Q 013862 15 FTGLLKLIERTIRSENCRS--SNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQ 92 (435)
Q Consensus 15 ~~~~a~dl~~~l~~l~~~~--~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (435)
.+...+|+.+.++.+.... ..+++.++|+||||.+++.+|.+. +.+++.|..-|....
T Consensus 75 ~~~~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~~------------------- 134 (218)
T PF01738_consen 75 PEQVAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSPP------------------- 134 (218)
T ss_dssp HHHHHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSSG-------------------
T ss_pred HHHHHHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCCC-------------------
Confidence 3456778878888886643 246899999999999999998877 678877765541000
Q ss_pred hHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhccc
Q 013862 93 MTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARLDA 172 (435)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 172 (435)
. ...+...+
T Consensus 135 --------------------------------------~---------------------------------~~~~~~~~ 143 (218)
T PF01738_consen 135 --------------------------------------P---------------------------------PPLEDAPK 143 (218)
T ss_dssp --------------------------------------G---------------------------------GHHHHGGG
T ss_pred --------------------------------------C---------------------------------cchhhhcc
Confidence 0 00122345
Q ss_pred ccceEEEEeeCCCCCCCChhHHHHHHhh----CCCceEEEeCCCCccccccCch
Q 013862 173 VKAQTLILCSGRDQLLPSEEEGDRLCRA----LPNCQTRRFGGGGHFLFLEDGV 222 (435)
Q Consensus 173 i~~Pvlii~G~~D~~~~~~~~~~~~~~~----~~~~~~~~i~~~gH~~~~e~pe 222 (435)
+++|+++++|++|+.++.+ ..+.+.+. -...++++++|++|-......+
T Consensus 144 ~~~P~l~~~g~~D~~~~~~-~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~ 196 (218)
T PF01738_consen 144 IKAPVLILFGENDPFFPPE-EVEALEEALKAAGVDVEVHVYPGAGHGFANPSRP 196 (218)
T ss_dssp --S-EEEEEETT-TTS-HH-HHHHHHHHHHCTTTTEEEEEETT--TTTTSTTST
T ss_pred cCCCEeecCccCCCCCChH-HHHHHHHHHHhcCCcEEEEECCCCcccccCCCCc
Confidence 7899999999999999988 45555444 3567999999999988766443
|
Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A. |
| >PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.4e-06 Score=72.64 Aligned_cols=57 Identities=26% Similarity=0.272 Sum_probs=46.2
Q ss_pred CCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcc
Q 013862 9 LQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATS 72 (435)
Q Consensus 9 ~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~ 72 (435)
++-..+.++..+.+.++++.... +.+.|||+||||+.|..+|.+++ +++ |+++|+..
T Consensus 36 p~l~~~p~~a~~~l~~~i~~~~~----~~~~liGSSlGG~~A~~La~~~~--~~a-vLiNPav~ 92 (187)
T PF05728_consen 36 PDLPPFPEEAIAQLEQLIEELKP----ENVVLIGSSLGGFYATYLAERYG--LPA-VLINPAVR 92 (187)
T ss_pred CCCCcCHHHHHHHHHHHHHhCCC----CCeEEEEEChHHHHHHHHHHHhC--CCE-EEEcCCCC
Confidence 44556788888888899888755 35999999999999999999986 333 88999854
|
One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised. |
| >COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.54 E-value=7e-07 Score=71.30 Aligned_cols=120 Identities=18% Similarity=0.243 Sum_probs=85.2
Q ss_pred CChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccccch
Q 013862 13 HHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQ 92 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (435)
-..++|++.+.+.+... +++++||+||+|+..+.+++.+....|+++.+++|+-.......
T Consensus 41 P~~~dWi~~l~~~v~a~-----~~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVAppd~~~~~~~-------------- 101 (181)
T COG3545 41 PVLDDWIARLEKEVNAA-----EGPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPPDVSRPEIR-------------- 101 (181)
T ss_pred CCHHHHHHHHHHHHhcc-----CCCeEEEEecccHHHHHHHHHhhhhccceEEEecCCCccccccc--------------
Confidence 46778888877777766 24799999999999999999988779999999998832110000
Q ss_pred hHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhccc
Q 013862 93 MTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARLDA 172 (435)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 172 (435)
. .....+ . ......
T Consensus 102 ------------------------------~----~~~~tf--------------~------------------~~p~~~ 115 (181)
T COG3545 102 ------------------------------P----KHLMTF--------------D------------------PIPREP 115 (181)
T ss_pred ------------------------------h----hhcccc--------------C------------------CCcccc
Confidence 0 000000 0 011223
Q ss_pred ccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCcccccc
Q 013862 173 VKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLE 219 (435)
Q Consensus 173 i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e 219 (435)
..-|.+++..++|++++.+ .++.+++..+ +.++.+.++||.--.+
T Consensus 116 lpfps~vvaSrnDp~~~~~-~a~~~a~~wg-s~lv~~g~~GHiN~~s 160 (181)
T COG3545 116 LPFPSVVVASRNDPYVSYE-HAEDLANAWG-SALVDVGEGGHINAES 160 (181)
T ss_pred CCCceeEEEecCCCCCCHH-HHHHHHHhcc-Hhheecccccccchhh
Confidence 4569999999999999999 7999998885 5777777789975433
|
|
| >COG0400 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.47 E-value=9.3e-07 Score=74.75 Aligned_cols=119 Identities=20% Similarity=0.230 Sum_probs=83.3
Q ss_pred hHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccccchhH
Q 013862 15 FTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMT 94 (435)
Q Consensus 15 ~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (435)
.+.+++-+.+..++.++. .++++++|+|-||.+++.+..++|+.++++|+.++........
T Consensus 80 ~~~~~~~l~~~~~~~gi~--~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~~----------------- 140 (207)
T COG0400 80 TEKLAEFLEELAEEYGID--SSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPEL----------------- 140 (207)
T ss_pred HHHHHHHHHHHHHHhCCC--hhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCcc-----------------
Confidence 334444444444444442 3689999999999999999999999999999998884321000
Q ss_pred HHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhccccc
Q 013862 95 LTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARLDAVK 174 (435)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 174 (435)
. . ..-.
T Consensus 141 ------------------------------------~------------------------------------~--~~~~ 146 (207)
T COG0400 141 ------------------------------------L------------------------------------P--DLAG 146 (207)
T ss_pred ------------------------------------c------------------------------------c--ccCC
Confidence 0 0 0125
Q ss_pred ceEEEEeeCCCCCCCChhHHHHHHhhCC----CceEEEeCCCCccccccCchhHHHHH
Q 013862 175 AQTLILCSGRDQLLPSEEEGDRLCRALP----NCQTRRFGGGGHFLFLEDGVDLVTTI 228 (435)
Q Consensus 175 ~Pvlii~G~~D~~~~~~~~~~~~~~~~~----~~~~~~i~~~gH~~~~e~pe~~~~~I 228 (435)
.|+++++|++|+++|.. ...++.+.+. +++...++ .||.+..|.-++..+-+
T Consensus 147 ~pill~hG~~Dpvvp~~-~~~~l~~~l~~~g~~v~~~~~~-~GH~i~~e~~~~~~~wl 202 (207)
T COG0400 147 TPILLSHGTEDPVVPLA-LAEALAEYLTASGADVEVRWHE-GGHEIPPEELEAARSWL 202 (207)
T ss_pred CeEEEeccCcCCccCHH-HHHHHHHHHHHcCCCEEEEEec-CCCcCCHHHHHHHHHHH
Confidence 69999999999999998 5776666543 56788888 79988766555444433
|
|
| >TIGR01840 esterase_phb esterase, PHB depolymerase family | Back alignment and domain information |
|---|
Probab=98.42 E-value=1.9e-06 Score=74.50 Aligned_cols=53 Identities=15% Similarity=0.169 Sum_probs=40.9
Q ss_pred HHHHHHHHHHhhhcC--CCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCc
Q 013862 19 LKLIERTIRSENCRS--SNRPVYLVGESLGACLALAVAARNPDMDLVLILANPAT 71 (435)
Q Consensus 19 a~dl~~~l~~l~~~~--~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~ 71 (435)
..++.++++.+.... ..++++|+|||+||.+++.++.++|+.+.+++.+++..
T Consensus 76 ~~~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 76 VESLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLP 130 (212)
T ss_pred HHHHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCc
Confidence 445555555554332 23589999999999999999999999999999888764
|
This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi. |
| >PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria | Back alignment and domain information |
|---|
Probab=98.40 E-value=2e-05 Score=73.81 Aligned_cols=65 Identities=22% Similarity=0.318 Sum_probs=57.5
Q ss_pred CCCCCChHHHHHHHHHHHHHhhhcCCCC-CEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccc
Q 013862 9 LQIGHHFTGLLKLIERTIRSENCRSSNR-PVYLVGESLGACLALAVAARNPDMDLVLILANPATSF 73 (435)
Q Consensus 9 ~~~~~s~~~~a~dl~~~l~~l~~~~~~~-~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~ 73 (435)
|..+-|++|.......+++.+...+++. +.+|+|.+-||..++.+|+.+|+.+..+|+-+++...
T Consensus 112 P~pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaPlsy 177 (581)
T PF11339_consen 112 PEPGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAPLSY 177 (581)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCccCceeecCCCccc
Confidence 5566799999999999999998888755 8899999999999999999999999999988777543
|
Their function is unknown. |
| >TIGR03230 lipo_lipase lipoprotein lipase | Back alignment and domain information |
|---|
Probab=98.39 E-value=1.2e-06 Score=82.61 Aligned_cols=58 Identities=19% Similarity=0.037 Sum_probs=48.3
Q ss_pred hHHHHHHHHHHHHHhhhc--CCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcc
Q 013862 15 FTGLLKLIERTIRSENCR--SSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATS 72 (435)
Q Consensus 15 ~~~~a~dl~~~l~~l~~~--~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~ 72 (435)
...+++++.++++.|... .+-++++||||||||.+|..++.++|++|.++++++|+.+
T Consensus 96 t~~vg~~la~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP 155 (442)
T TIGR03230 96 TKLVGKDVAKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGP 155 (442)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCC
Confidence 367788888888877421 1236899999999999999999999999999999999864
|
Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity. |
| >COG4757 Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.34 E-value=2.1e-06 Score=71.44 Aligned_cols=64 Identities=16% Similarity=0.150 Sum_probs=52.0
Q ss_pred hhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEE--eCC----CCccccccCc-hhHHHHHhhc
Q 013862 167 NARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRR--FGG----GGHFLFLEDG-VDLVTTIKGA 231 (435)
Q Consensus 167 ~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~--i~~----~gH~~~~e~p-e~~~~~I~~~ 231 (435)
.+....+.+|++.+...+|++.|+. ..+.+.+..+|+.+.. ++. .||+-..-+| |.+.+.+.+|
T Consensus 209 ~q~yaaVrtPi~~~~~~DD~w~P~A-s~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w 279 (281)
T COG4757 209 RQVYAAVRTPITFSRALDDPWAPPA-SRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGW 279 (281)
T ss_pred HHHHHHhcCceeeeccCCCCcCCHH-HHHHHHHhhhcCcccceecCcccCcccchhhhccchHHHHHHHHHh
Confidence 4667789999999999999999999 7999999998875444 433 5999988887 7777777664
|
|
| >COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.34 E-value=3.7e-06 Score=68.11 Aligned_cols=120 Identities=21% Similarity=0.296 Sum_probs=85.3
Q ss_pred HHHHHHHHHHhhhcCCCCCE-EEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccccchhHHHH
Q 013862 19 LKLIERTIRSENCRSSNRPV-YLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTLTL 97 (435)
Q Consensus 19 a~dl~~~l~~l~~~~~~~~~-~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (435)
.+|..+.++.++..+++.+. -|.|+|+|+.|++.+|.+.|+. ...+.+.|...
T Consensus 85 ~~Da~aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~e~-~~~is~~p~~~------------------------- 138 (210)
T COG2945 85 LEDAAAALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRRPEI-LVFISILPPIN------------------------- 138 (210)
T ss_pred HHHHHHHHHHHHhhCCCchhhhhcccchHHHHHHHHHHhcccc-cceeeccCCCC-------------------------
Confidence 45677778888877776665 6889999999999999998763 22222222210
Q ss_pred HHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhcccccceE
Q 013862 98 SYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARLDAVKAQT 177 (435)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv 177 (435)
. .+ ...+....+|.
T Consensus 139 -------------------------------~-~d----------------------------------fs~l~P~P~~~ 152 (210)
T COG2945 139 -------------------------------A-YD----------------------------------FSFLAPCPSPG 152 (210)
T ss_pred -------------------------------c-hh----------------------------------hhhccCCCCCc
Confidence 0 00 01233457899
Q ss_pred EEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhccccc
Q 013862 178 LILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYR 235 (435)
Q Consensus 178 lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~ 235 (435)
++|+|+.|.+++.. ..-++++. ...+++++++++|+.+- +-+.+.+.|.+ |+.
T Consensus 153 lvi~g~~Ddvv~l~-~~l~~~~~-~~~~~i~i~~a~HFF~g-Kl~~l~~~i~~--~l~ 205 (210)
T COG2945 153 LVIQGDADDVVDLV-AVLKWQES-IKITVITIPGADHFFHG-KLIELRDTIAD--FLE 205 (210)
T ss_pred eeEecChhhhhcHH-HHHHhhcC-CCCceEEecCCCceecc-cHHHHHHHHHH--Hhh
Confidence 99999999999888 46666666 45688999999998864 45678888888 774
|
|
| >PRK08419 lipid A biosynthesis lauroyl acyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=98.32 E-value=2.5e-06 Score=77.76 Aligned_cols=126 Identities=10% Similarity=0.091 Sum_probs=80.6
Q ss_pred CCcEEeccCCCCC----CCCEEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcchHHHHH----
Q 013862 278 DGKIVRGLSGIPS----EGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFR---- 349 (435)
Q Consensus 278 ~~~~~~~~~~~p~----~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 349 (435)
..++++|.|+++. ++++|++++|.+. ++.+...... .+.++.+++++.-. |+ +-.++.
T Consensus 95 ~~v~i~g~e~l~~a~~~g~gvI~~t~H~Gn-wE~~~~~l~~---~~~~~~~v~~~~~n--~~--------~~~~~~~~R~ 160 (298)
T PRK08419 95 NKVTFINEENLLDALKKKRPIIVTTAHYGY-WELFSLALAA---YYGAVSIVGRLLKS--AP--------INEMISKRRE 160 (298)
T ss_pred CcEEEECHHHHHHHHHcCCCEEEEeeCccH-HHHHHHHHHh---cCCCeEEEEeCCCC--hH--------HHHHHHHHHH
Confidence 4678999998874 6899999999965 4664433322 12357777775432 21 333332
Q ss_pred HhCCccccH----HHHHHHhcCCCeEEEecCccccccccCCccc---eeecCCchhHHHHHHHcCCCEEEEEEecch
Q 013862 350 IMGSVPVSA----INFYKLVSSKAHVLLYPGGVREAFHRKGEEY---KLFWPESSEFVRVAAAFGGKIVPFGVVGED 419 (435)
Q Consensus 350 ~~g~~~~~r----~~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~---~~~~~~~~g~~~~a~~~~~~ivPv~~~g~~ 419 (435)
..|.-.+.. ..+.++|++|+.|+|+|..... ..+|... ..+..+.+|.++||.++|+||||+++...+
T Consensus 161 ~~g~~~i~~~~~~r~~l~~Lk~g~~v~il~Dq~~~--~~~gv~v~FfG~~a~~~~g~a~LA~k~~apvvpv~~~~~~ 235 (298)
T PRK08419 161 QFGIELIDKKGAMKELLKALKQGRALGILVDQNVV--PKEGVEVKFFNKRVTHTTIASILARRYNALIIPVFIFNDD 235 (298)
T ss_pred HcCCeeEECccHHHHHHHHHHcCCeEEEEecCCCC--CCCCeEEecCCCCcccchhHHHHHHHHCCCEEEEEEEECC
Confidence 334433322 2788899999999999943321 0112111 111237899999999999999999997654
|
|
| >KOG1505 consensus Lysophosphatidic acid acyltransferase LPAAT and related acyltransferases [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.29 E-value=5.4e-07 Score=81.99 Aligned_cols=82 Identities=17% Similarity=0.203 Sum_probs=58.7
Q ss_pred CCCCCEEEEecCCcccchhHhhhHHHhhhcCc--eeeeeccccccccccCCCCCCcchHHHHHHhCCccccHH-------
Q 013862 289 PSEGPVLLVGNHMLLGLEALPMVPTFVIERNI--LVRAIAHPMVFFNAKDGGLPDLVTYDTFRIMGSVPVSAI------- 359 (435)
Q Consensus 289 p~~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~------- 359 (435)
+.+-.+|+++||++. .|.+.++ .+....+. .+.+++|..+-..|. +++.+...|.|.++|+
T Consensus 68 ~~~e~alli~NH~~~-~Dwl~~w-~~~~~~G~l~~~~~~lK~~lk~~Pi--------~Gw~~~~~~fiFl~R~~~~d~~~ 137 (346)
T KOG1505|consen 68 YGKERALLIANHQSE-VDWLYLW-TYAQRKGVLGNVKIVLKKSLKYLPI--------FGWGMWFHGFIFLERNWEKDEKT 137 (346)
T ss_pred cCCCceEEEeccccc-cchhhHH-HHHhcCCchhhhhHHHhhHHHhCcc--------hheeeeecceEEEecchhhhHHH
Confidence 346789999999986 4666665 33333342 678888988876543 6677888999999997
Q ss_pred --HHHHHhcC---CCeEEEecCcccc
Q 013862 360 --NFYKLVSS---KAHVLLYPGGVRE 380 (435)
Q Consensus 360 --~~~~~l~~---g~~~~ifPeG~~~ 380 (435)
...+.+++ -..+++||||||-
T Consensus 138 l~~~~k~l~~~~~~~wLlLFPEGT~~ 163 (346)
T KOG1505|consen 138 LISLLKHLKDSPDPYWLLLFPEGTRF 163 (346)
T ss_pred HHHHHHHhccCCCceEEEEecCCCcc
Confidence 33444443 4599999999964
|
|
| >PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=98.27 E-value=2e-05 Score=69.18 Aligned_cols=60 Identities=12% Similarity=0.074 Sum_probs=49.3
Q ss_pred CChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCC-----ceeEEEEecCCcc
Q 013862 13 HHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPD-----MDLVLILANPATS 72 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~-----~v~~lVli~~~~~ 72 (435)
.++...+..+..++..|...+.=+++.+|||||||..+..|+..+.. .+.++|.++++..
T Consensus 80 ~~~~~qa~wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfn 144 (255)
T PF06028_consen 80 ANYKKQAKWLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFN 144 (255)
T ss_dssp CHHHHHHHHHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TT
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccC
Confidence 47889999999999999887776799999999999999999988643 5899999998753
|
; PDB: 3LP5_A 3FLE_A 3DS8_A. |
| >cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes | Back alignment and domain information |
|---|
Probab=98.26 E-value=1.9e-06 Score=77.40 Aligned_cols=59 Identities=20% Similarity=0.033 Sum_probs=48.2
Q ss_pred ChHHHHHHHHHHHHHhhhc--CCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcc
Q 013862 14 HFTGLLKLIERTIRSENCR--SSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATS 72 (435)
Q Consensus 14 s~~~~a~dl~~~l~~l~~~--~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~ 72 (435)
++...++++.++++.+... .+.++++||||||||.+|..++.++|++|+++|+++|+.+
T Consensus 88 ~~~~v~~~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p 148 (275)
T cd00707 88 NTRVVGAELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGP 148 (275)
T ss_pred hHHHHHHHHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCcc
Confidence 4556677888888877442 1235899999999999999999999999999999998864
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins | Back alignment and domain information |
|---|
Probab=98.25 E-value=2.6e-05 Score=71.28 Aligned_cols=155 Identities=16% Similarity=0.053 Sum_probs=82.9
Q ss_pred CCChHHHHHHHHHHHHHhhhcC--CCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccc
Q 013862 12 GHHFTGLLKLIERTIRSENCRS--SNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELM 89 (435)
Q Consensus 12 ~~s~~~~a~dl~~~l~~l~~~~--~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~ 89 (435)
.+-+..+..|....++.+.... .++++.+.|.|.||.+++.+|+..| +|++++...|...--... +...
T Consensus 149 ~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~d~~~~--------~~~~ 219 (320)
T PF05448_consen 149 DYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLCDFRRA--------LELR 219 (320)
T ss_dssp T-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSSSHHHH--------HHHT
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCccchhhh--------hhcC
Confidence 3445666777777777765421 2468999999999999999999986 699988887763211000 0000
Q ss_pred c-chhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhh
Q 013862 90 S-GQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANA 168 (435)
Q Consensus 90 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (435)
. ......+...+... ... .+...+..+.+ . ..+...
T Consensus 220 ~~~~~y~~~~~~~~~~-------------d~~--~~~~~~v~~~L-----------------------~-----Y~D~~n 256 (320)
T PF05448_consen 220 ADEGPYPEIRRYFRWR-------------DPH--HEREPEVFETL-----------------------S-----YFDAVN 256 (320)
T ss_dssp --STTTHHHHHHHHHH-------------SCT--HCHHHHHHHHH-----------------------H-----TT-HHH
T ss_pred CccccHHHHHHHHhcc-------------CCC--cccHHHHHHHH-----------------------h-----hhhHHH
Confidence 0 00000111111100 000 00000000000 0 012234
Q ss_pred hcccccceEEEEeeCCCCCCCChhHHHHHHhhCC-CceEEEeCCCCcccccc
Q 013862 169 RLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALP-NCQTRRFGGGGHFLFLE 219 (435)
Q Consensus 169 ~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e 219 (435)
....|+||+++-.|-.|.++|+. .+-...+.++ ..++.+++..||....+
T Consensus 257 fA~ri~~pvl~~~gl~D~~cPP~-t~fA~yN~i~~~K~l~vyp~~~He~~~~ 307 (320)
T PF05448_consen 257 FARRIKCPVLFSVGLQDPVCPPS-TQFAAYNAIPGPKELVVYPEYGHEYGPE 307 (320)
T ss_dssp HGGG--SEEEEEEETT-SSS-HH-HHHHHHCC--SSEEEEEETT--SSTTHH
T ss_pred HHHHcCCCEEEEEecCCCCCCch-hHHHHHhccCCCeeEEeccCcCCCchhh
Confidence 45678999999999999999999 6777887776 45899999999965443
|
Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F .... |
| >PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family | Back alignment and domain information |
|---|
Probab=98.23 E-value=5.5e-06 Score=71.46 Aligned_cols=49 Identities=18% Similarity=0.335 Sum_probs=33.7
Q ss_pred ccccceEEEEeeCCCCCCCChhHHHHHHhhCCC-ceEEEeCCCCccccccCc
Q 013862 171 DAVKAQTLILCSGRDQLLPSEEEGDRLCRALPN-CQTRRFGGGGHFLFLEDG 221 (435)
Q Consensus 171 ~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p 221 (435)
..+++|+|.|+|++|.+++++ ..+.+.+.+.+ .+++..+ +||.++...+
T Consensus 158 ~~i~iPtlHv~G~~D~~~~~~-~s~~L~~~~~~~~~v~~h~-gGH~vP~~~~ 207 (212)
T PF03959_consen 158 PKISIPTLHVIGENDPVVPPE-RSEALAEMFDPDARVIEHD-GGHHVPRKKE 207 (212)
T ss_dssp TT---EEEEEEETT-SSS-HH-HHHHHHHHHHHHEEEEEES-SSSS----HH
T ss_pred ccCCCCeEEEEeCCCCCcchH-HHHHHHHhccCCcEEEEEC-CCCcCcCChh
Confidence 356899999999999999988 68888888877 7888888 5999886644
|
It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A. |
| >PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=98.23 E-value=1.4e-05 Score=71.87 Aligned_cols=54 Identities=19% Similarity=0.306 Sum_probs=46.4
Q ss_pred ceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccc-cccCchhHHHHHhh
Q 013862 175 AQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFL-FLEDGVDLVTTIKG 230 (435)
Q Consensus 175 ~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~-~~e~pe~~~~~I~~ 230 (435)
-.+.++.+++|.++|.. ....+.+..|++++..+++ ||.. ++-+.+.|.+.|.+
T Consensus 290 ~~ii~V~A~~DaYVPr~-~v~~Lq~~WPGsEvR~l~g-GHVsA~L~~q~~fR~AI~D 344 (348)
T PF09752_consen 290 SAIIFVAAKNDAYVPRH-GVLSLQEIWPGSEVRYLPG-GHVSAYLLHQEAFRQAIYD 344 (348)
T ss_pred CcEEEEEecCceEechh-hcchHHHhCCCCeEEEecC-CcEEEeeechHHHHHHHHH
Confidence 35788899999999998 6889999999999999996 9974 45677888888887
|
|
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=98.22 E-value=1e-05 Score=81.97 Aligned_cols=69 Identities=17% Similarity=0.220 Sum_probs=50.5
Q ss_pred CccccccC----CCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcc
Q 013862 2 YGACIFQL----QIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATS 72 (435)
Q Consensus 2 yG~s~~p~----~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~ 72 (435)
||..+... ....+++|+++.+..+++. +.. ..+++.+.|.|.||+++...+.++|++++++|...|...
T Consensus 488 ~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~-g~~-d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D 560 (686)
T PRK10115 488 LGQQWYEDGKFLKKKNTFNDYLDACDALLKL-GYG-SPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVD 560 (686)
T ss_pred cCHHHHHhhhhhcCCCcHHHHHHHHHHHHHc-CCC-ChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchh
Confidence 55555442 2235677776666666544 332 246899999999999999999999999999999888754
|
|
| >COG3176 Putative hemolysin [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.22 E-value=1.1e-06 Score=76.90 Aligned_cols=139 Identities=12% Similarity=0.079 Sum_probs=91.9
Q ss_pred CCcEEeccCCCCCCCCEEEEecCCcccchhHhhhHHHhhhcCceeeeeccc-ccccccc--CCCCCCcchHHHHHHhCCc
Q 013862 278 DGKIVRGLSGIPSEGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHP-MVFFNAK--DGGLPDLVTYDTFRIMGSV 354 (435)
Q Consensus 278 ~~~~~~~~~~~p~~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~g~~ 354 (435)
.++...+.+.+|..+++++||||. ...|..... .+......+.+++++. .+-..|| +..++.-.+-. ....-..
T Consensus 66 ~~l~~~~~~~~~d~d~fd~VcnHl-gv~Dg~~~~-d~~~~~vgtyR~l~~~~A~r~~~~ys~~ef~v~~~~~-~~~~k~~ 142 (292)
T COG3176 66 ARLDAAALERIPDQDRFDIVCNHL-GVRDGVIVA-DLLKQLVGTYRLLANAQALRAGGFYSALEFPVDWLEE-LRPKKFN 142 (292)
T ss_pred cccccccccccCCCCCeeEecccc-ceecccchh-hhHhhhcCceEEeehHHHHHhCCCccccccceeeecc-cChHHHH
Confidence 456677788999999999999994 445664433 3334445678888883 4444443 11122111100 0000133
Q ss_pred cccHHHHHHHhcCCCeEEEecCccccccccCCccceeecCCchhHHHHHHHcCCCEEEEEEecchhhh
Q 013862 355 PVSAINFYKLVSSKAHVLLYPGGVREAFHRKGEEYKLFWPESSEFVRVAAAFGGKIVPFGVVGEDDLA 422 (435)
Q Consensus 355 ~~~r~~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~ivPv~~~g~~~~~ 422 (435)
-..|..+.+.+++|.+|++||.|..+-... |...... ++..+..++.+.+++++|+++.|-+...
T Consensus 143 e~grscv~~~yr~g~tl~lfwaG~~ay~~~-g~~~~~~--gcaS~~~~~~~~~a~~~p~~~~~r~~~~ 207 (292)
T COG3176 143 ELGRSCVHREYREGRTLLLFWAGLVAYLDK-GRLDDMP--GCASVPGLPRKHGAALAPVHHNGRNSAL 207 (292)
T ss_pred HHHHHHHHHHHhcCCEEEEeccchhHHhhc-cCcccCc--cccccccchhhcccccchhheecccCCc
Confidence 345668899999999999999998764343 6666655 5888888999999999999999766543
|
|
| >PTZ00472 serine carboxypeptidase (CBP1); Provisional | Back alignment and domain information |
|---|
Probab=98.21 E-value=4.3e-05 Score=73.72 Aligned_cols=62 Identities=21% Similarity=0.096 Sum_probs=46.9
Q ss_pred CCChHHHHHHHHHHHHHhhhcCC---CCCEEEEEeChhHHHHHHHHHhC----------CCceeEEEEecCCccc
Q 013862 12 GHHFTGLLKLIERTIRSENCRSS---NRPVYLVGESLGACLALAVAARN----------PDMDLVLILANPATSF 73 (435)
Q Consensus 12 ~~s~~~~a~dl~~~l~~l~~~~~---~~~~~lvGhS~Gg~va~~~a~~~----------p~~v~~lVli~~~~~~ 73 (435)
..+.++.++|+.++++..-..++ ..+++|+||||||..+..+|.+- +-.++++++-++....
T Consensus 144 ~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~dp 218 (462)
T PTZ00472 144 DHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTDP 218 (462)
T ss_pred CCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccCh
Confidence 35668899999999987643333 37999999999999998887652 1147899988877643
|
|
| >PLN00021 chlorophyllase | Back alignment and domain information |
|---|
Probab=98.19 E-value=2.6e-05 Score=71.18 Aligned_cols=36 Identities=28% Similarity=0.251 Sum_probs=31.8
Q ss_pred CCEEEEEeChhHHHHHHHHHhCCC-----ceeEEEEecCCc
Q 013862 36 RPVYLVGESLGACLALAVAARNPD-----MDLVLILANPAT 71 (435)
Q Consensus 36 ~~~~lvGhS~Gg~va~~~a~~~p~-----~v~~lVli~~~~ 71 (435)
++++++||||||.+|+.+|.++++ +++++|+++|..
T Consensus 126 ~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~ 166 (313)
T PLN00021 126 SKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVD 166 (313)
T ss_pred hheEEEEECcchHHHHHHHhhccccccccceeeEEeecccc
Confidence 579999999999999999999875 588999888874
|
|
| >PLN02733 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=98.18 E-value=5e-06 Score=78.87 Aligned_cols=58 Identities=12% Similarity=0.174 Sum_probs=47.3
Q ss_pred ChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCc----eeEEEEecCCc
Q 013862 14 HFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDM----DLVLILANPAT 71 (435)
Q Consensus 14 s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~----v~~lVli~~~~ 71 (435)
..+++.+++.++++.+....+.++++|+||||||.++..++..+|+. |+++|.++++.
T Consensus 140 ~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p~~~~k~I~~~I~la~P~ 201 (440)
T PLN02733 140 RLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHSDVFEKYVNSWIAIAAPF 201 (440)
T ss_pred cHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCCHhHHhHhccEEEECCCC
Confidence 35667778888887776555567999999999999999999999864 78999998764
|
|
| >PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate [] | Back alignment and domain information |
|---|
Probab=98.16 E-value=1.2e-05 Score=74.38 Aligned_cols=56 Identities=16% Similarity=0.090 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcc
Q 013862 16 TGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATS 72 (435)
Q Consensus 16 ~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~ 72 (435)
+.+...+.+.+...... ...++.++|.||||.+|.++|..+++|++++|..+++..
T Consensus 242 ~~l~~aVLd~L~~~p~V-D~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh 297 (411)
T PF06500_consen 242 SRLHQAVLDYLASRPWV-DHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVH 297 (411)
T ss_dssp CHHHHHHHHHHHHSTTE-EEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---S
T ss_pred HHHHHHHHHHHhcCCcc-ChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHh
Confidence 34555555555554321 235899999999999999999999999999999998853
|
This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C. |
| >COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.16 E-value=2.7e-05 Score=60.99 Aligned_cols=116 Identities=17% Similarity=0.074 Sum_probs=80.5
Q ss_pred CCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccc
Q 013862 10 QIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELM 89 (435)
Q Consensus 10 ~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~ 89 (435)
....--.++...+.++-+.+.. .|.++-||||||.++..+|..-...|+++++++-+......+
T Consensus 67 ~~~t~~~~~~~~~aql~~~l~~----gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppGKP------------ 130 (213)
T COG3571 67 GSGTLNPEYIVAIAQLRAGLAE----GPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGKP------------ 130 (213)
T ss_pred ccccCCHHHHHHHHHHHhcccC----CceeeccccccchHHHHHHHhhcCCcceEEEecCccCCCCCc------------
Confidence 3334455677777777766544 589999999999999999987666699999887553211110
Q ss_pred cchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhh
Q 013862 90 SGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANAR 169 (435)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (435)
+ + .+ .+.
T Consensus 131 ---------------------------------e----~-~R-----------------------------------t~H 137 (213)
T COG3571 131 ---------------------------------E----Q-LR-----------------------------------TEH 137 (213)
T ss_pred ---------------------------------c----c-ch-----------------------------------hhh
Confidence 0 0 00 144
Q ss_pred cccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccc
Q 013862 170 LDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFL 216 (435)
Q Consensus 170 l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~ 216 (435)
+..++.|+||.+|+.|.+-..+ .. .-....+..++++++++.|.+
T Consensus 138 L~gl~tPtli~qGtrD~fGtr~-~V-a~y~ls~~iev~wl~~adHDL 182 (213)
T COG3571 138 LTGLKTPTLITQGTRDEFGTRD-EV-AGYALSDPIEVVWLEDADHDL 182 (213)
T ss_pred ccCCCCCeEEeecccccccCHH-HH-HhhhcCCceEEEEeccCcccc
Confidence 6678999999999999987665 23 222344567999999999975
|
|
| >COG2121 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.15 E-value=1.3e-05 Score=65.47 Aligned_cols=113 Identities=18% Similarity=0.222 Sum_probs=76.9
Q ss_pred EEeccCC--CCCCCCEEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcchHHHHHHhCCccc--
Q 013862 281 IVRGLSG--IPSEGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRIMGSVPV-- 356 (435)
Q Consensus 281 ~~~~~~~--~p~~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-- 356 (435)
+..+.++ +-.++|+|+..-|.-..+ +.. ..+..++++.++.+.. ..- ....++..+|+..|
T Consensus 33 ~~~~~~~~~~~~~~p~I~afWHg~l~l-----~p~-~~~~~~~~~amvS~s~-DGE--------liA~~l~kfG~~~IRG 97 (214)
T COG2121 33 KAGGADNNALANEKPGIVAFWHGQLAL-----GPF-AFPKGKKIYAMVSPSR-DGE--------LIARLLEKFGLRVIRG 97 (214)
T ss_pred hhhhhhcchhhccCCeEEEEecccccc-----chh-hccCCCcEEEEEcCCc-CHH--------HHHHHHHHcCceEEec
Confidence 3334443 667899999999984322 222 2223344666555432 221 25567788887554
Q ss_pred --cHH------HHHHHhcCCCeEEEecCccccccccCCccceeecCCchhHHHHHHHcCCCEEEEEEecc
Q 013862 357 --SAI------NFYKLVSSKAHVLLYPGGVREAFHRKGEEYKLFWPESSEFVRVAAAFGGKIVPFGVVGE 418 (435)
Q Consensus 357 --~r~------~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~ivPv~~~g~ 418 (435)
++. ++.+.|++|.+++|-|+|-+. ..++ -..|...||.++|+||+||.+.-+
T Consensus 98 Ss~Kgg~~Alr~l~k~Lk~G~~i~itpDgPkG------p~~~----~~~Gii~LA~~sg~pi~pv~~~~s 157 (214)
T COG2121 98 SSNKGGISALRALLKALKQGKSIAITPDGPKG------PVHK----IGDGIIALAQKSGVPIIPVGVATS 157 (214)
T ss_pred cCCcchHHHHHHHHHHHhCCCcEEEcCCCCCC------Ccee----ccchhhHhhHhcCCCeEEEEEeee
Confidence 222 788889999999999999654 3444 789999999999999999998643
|
|
| >KOG3975 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.14 E-value=5e-05 Score=64.13 Aligned_cols=198 Identities=11% Similarity=0.027 Sum_probs=105.5
Q ss_pred CCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhC-C-CceeEEEEecCCcc-cccccccccccccc
Q 013862 10 QIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARN-P-DMDLVLILANPATS-FRKSLLQTIMPIPA 86 (435)
Q Consensus 10 ~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~-p-~~v~~lVli~~~~~-~~~~~~~~~~~~~~ 86 (435)
.+.+|+++.++--.++++..-.+ +.+++++|||-|++..+...... + -.|.+.+++=|... ...++.... +
T Consensus 86 ~eifsL~~QV~HKlaFik~~~Pk--~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~----~ 159 (301)
T KOG3975|consen 86 EEIFSLQDQVDHKLAFIKEYVPK--DRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIR----L 159 (301)
T ss_pred ccccchhhHHHHHHHHHHHhCCC--CCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceE----e
Confidence 45689999999999999876443 57999999999999999988643 2 26888888877652 111111110 0
Q ss_pred ccccchhHHHHHHHHHhhcCChhH----HH--HHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHh---
Q 013862 87 ELMSGQMTLTLSYLLSLLTGDPLK----MA--MDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLE--- 157 (435)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 157 (435)
........ ..-++.....-.... .. .........+++...... ........+....
T Consensus 160 t~~l~~~~-hv~~lt~yi~~~~lp~~ir~~Li~~~l~~~n~p~e~l~tal--------------~l~h~~v~rn~v~la~ 224 (301)
T KOG3975|consen 160 TKVLRYLP-HVVSLTSYIYWILLPGFIRFILIKFMLCGSNGPQEFLSTAL--------------FLTHPQVVRNSVGLAA 224 (301)
T ss_pred eeeeeeeh-hhhheeeeeeeecChHHHHHHHHHHhcccCCCcHHHHhhHH--------------HhhcHHHHHHHhhhch
Confidence 00000000 000000000000000 00 000011111111111000 0000000000000
Q ss_pred -hhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCc--eEEEeCCCCccccccCchhHHHHHhh
Q 013862 158 -LLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNC--QTRRFGGGGHFLFLEDGVDLVTTIKG 230 (435)
Q Consensus 158 -~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~--~~~~i~~~gH~~~~e~pe~~~~~I~~ 230 (435)
-+..-.....+.+.+-.+-+.+.+|..|.++|.. ..+.+.+.+|.. ++-+ +++.|.....+.+..+..+.+
T Consensus 225 qEm~eV~~~d~e~~een~d~l~Fyygt~DgW~p~~-~~d~~kdd~~eed~~Lde-dki~HAFV~~~~q~ma~~v~d 298 (301)
T KOG3975|consen 225 QEMEEVTTRDIEYCEENLDSLWFYYGTNDGWVPSH-YYDYYKDDVPEEDLKLDE-DKIPHAFVVKHAQYMANAVFD 298 (301)
T ss_pred HHHHHHHHhHHHHHHhcCcEEEEEccCCCCCcchH-HHHHHhhhcchhceeecc-ccCCcceeecccHHHHHHHHH
Confidence 0000011112344455678899999999999998 799999999865 4544 789999999888888887765
|
|
| >KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.06 E-value=1.6e-05 Score=65.67 Aligned_cols=63 Identities=14% Similarity=0.056 Sum_probs=49.9
Q ss_pred CCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHh--CCCceeEEEEecCCcc
Q 013862 10 QIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAAR--NPDMDLVLILANPATS 72 (435)
Q Consensus 10 ~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~--~p~~v~~lVli~~~~~ 72 (435)
-...|+.+-++|+..+++++....-...++|+|||.|+.-.+.|... .|..+.+.|+.+|...
T Consensus 81 ~Gt~slk~D~edl~~l~~Hi~~~~fSt~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSD 145 (299)
T KOG4840|consen 81 YGTFSLKDDVEDLKCLLEHIQLCGFSTDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSD 145 (299)
T ss_pred cccccccccHHHHHHHHHHhhccCcccceEEEecCccchHHHHHHHhccchHHHHHHHHhCccch
Confidence 34467889999999999998776445589999999999999988732 3566888888887753
|
|
| >PRK07920 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.05 E-value=1.1e-05 Score=73.52 Aligned_cols=128 Identities=15% Similarity=0.077 Sum_probs=80.7
Q ss_pred CcEE--eccCCCCC----CCCEEEEecCCcccchhHhhhHHHhhhcCceeeeecccc----ccccccCCCCCCcchHHHH
Q 013862 279 GKIV--RGLSGIPS----EGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPM----VFFNAKDGGLPDLVTYDTF 348 (435)
Q Consensus 279 ~~~~--~~~~~~p~----~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 348 (435)
.+++ +|.|++.. .+++|+++.|.+. ++....... ..+.++..++++. +.+. +..+-
T Consensus 89 ~v~i~~~g~e~l~~a~~~gkgvIllt~H~Gn-wE~~~~~l~---~~~~~~~~vyr~~~n~~~~~~----------~~~~R 154 (298)
T PRK07920 89 RVRVSIEGLEHLDAALAAGRGVVLALPHSGN-WDMAGAWLV---QHHGPFTTVAERLKPESLYER----------FVAYR 154 (298)
T ss_pred hhhhccCCHHHHHHHHhcCCCeEEEecCCCH-HHHHHHHHH---HcCCCeEEEEeccCCHHHHHH----------HHHHH
Confidence 3556 88887763 5799999999965 465332222 2233466666542 2211 22333
Q ss_pred HHhC--CccccH------HHHHHHhcCCCeEEEecCccccccccCCcc---ceeecCCchhHHHHHHHcCCCEEEEEEec
Q 013862 349 RIMG--SVPVSA------INFYKLVSSKAHVLLYPGGVREAFHRKGEE---YKLFWPESSEFVRVAAAFGGKIVPFGVVG 417 (435)
Q Consensus 349 ~~~g--~~~~~r------~~~~~~l~~g~~~~ifPeG~~~~~~~~~~~---~~~~~~~~~g~~~~a~~~~~~ivPv~~~g 417 (435)
...| .++.++ +.+.++|++|+.|+|.|..... ..|.. ......+.+|.++||.++|+||||+++.-
T Consensus 155 ~~~g~~~i~~~~~~~~~~r~ii~~Lk~g~~v~il~Dq~~~---~~g~~v~FFG~~a~t~~g~a~LA~~~~apVvp~~~~r 231 (298)
T PRK07920 155 ESLGFEVLPLTGGERPPFEVLAERLRAGGVVCLLADRDLT---RSGVEVDFFGERTRMPAGPAALALETGAALLPVHLWF 231 (298)
T ss_pred HhcCCEEEecCCCCchHHHHHHHHHHcCCeEEEEeccCcc---CCCCEEeeCCCCCCCCCCHHHHHHHHCCcEEEEEEEE
Confidence 4445 344332 2688999999999999987754 22221 11122367999999999999999999986
Q ss_pred chhhhh
Q 013862 418 EDDLAQ 423 (435)
Q Consensus 418 ~~~~~~ 423 (435)
..+.|.
T Consensus 232 ~~~~y~ 237 (298)
T PRK07920 232 EGDGWG 237 (298)
T ss_pred eCCeEE
Confidence 655443
|
|
| >PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins | Back alignment and domain information |
|---|
Probab=98.05 E-value=3.3e-05 Score=63.33 Aligned_cols=59 Identities=25% Similarity=0.269 Sum_probs=50.7
Q ss_pred CChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCC----ceeEEEEecCCc
Q 013862 13 HHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPD----MDLVLILANPAT 71 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~----~v~~lVli~~~~ 71 (435)
-|.++.+.|+..++++.......++++|+|+|+|+-+.-....+-|+ +|+.++|+++..
T Consensus 45 rtP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 45 RTPEQTAADLARIIRHYRARWGRKRVVLIGYSFGADVLPFIYNRLPAALRARVAQVVLLSPST 107 (192)
T ss_pred CCHHHHHHHHHHHHHHHHHHhCCceEEEEeecCCchhHHHHHhhCCHHHHhheeEEEEeccCC
Confidence 47889999999999998777667899999999999888877777764 799999999884
|
VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium []. |
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=97.97 E-value=0.00023 Score=78.94 Aligned_cols=58 Identities=24% Similarity=0.228 Sum_probs=49.8
Q ss_pred CCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHh---CCCceeEEEEecCCc
Q 013862 11 IGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAAR---NPDMDLVLILANPAT 71 (435)
Q Consensus 11 ~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~---~p~~v~~lVli~~~~ 71 (435)
..++++++++++.+.++.+.. .++++++||||||.+|..+|.+ .++++..++++++..
T Consensus 1111 ~~~~l~~la~~~~~~i~~~~~---~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1111 TATSLDEVCEAHLATLLEQQP---HGPYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDTWP 1171 (1296)
T ss_pred CCCCHHHHHHHHHHHHHhhCC---CCCEEEEEechhhHHHHHHHHHHHHcCCceeEEEEecCCC
Confidence 357999999999999987654 3589999999999999999985 588999999998753
|
|
| >PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=97.97 E-value=3.3e-05 Score=66.76 Aligned_cols=61 Identities=28% Similarity=0.314 Sum_probs=46.9
Q ss_pred CCChHHHHHHHHHHHHHhhhc-----CCCCCEEEEEeChhHHHHHHHHHhCCC----ceeEEEEecCCcc
Q 013862 12 GHHFTGLLKLIERTIRSENCR-----SSNRPVYLVGESLGACLALAVAARNPD----MDLVLILANPATS 72 (435)
Q Consensus 12 ~~s~~~~a~dl~~~l~~l~~~-----~~~~~~~lvGhS~Gg~va~~~a~~~p~----~v~~lVli~~~~~ 72 (435)
..++.+..+|+.+.++.+... ...++++|+|+|.||.+|+.++.+..+ .++++++++|...
T Consensus 42 ~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d 111 (211)
T PF07859_consen 42 EAPFPAALEDVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTD 111 (211)
T ss_dssp TSSTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSS
T ss_pred cccccccccccccceeeeccccccccccccceEEeecccccchhhhhhhhhhhhcccchhhhhccccccc
Confidence 356778888888877776543 335689999999999999999875433 4899999998643
|
; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A .... |
| >PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=97.90 E-value=4e-05 Score=66.50 Aligned_cols=59 Identities=19% Similarity=0.196 Sum_probs=42.6
Q ss_pred CChHHHHHHHHHHHHHhhhc-----CCCCCEEEEEeChhHHHHHHHHHhCC---CceeEEEEecCCc
Q 013862 13 HHFTGLLKLIERTIRSENCR-----SSNRPVYLVGESLGACLALAVAARNP---DMDLVLILANPAT 71 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~-----~~~~~~~lvGhS~Gg~va~~~a~~~p---~~v~~lVli~~~~ 71 (435)
.++.+.++.+.+.++.+... .+.++++||||||||.+|..++...+ +.|+.+|.++++.
T Consensus 57 ~~l~~q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh 123 (225)
T PF07819_consen 57 RTLQRQAEFLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPH 123 (225)
T ss_pred ccHHHHHHHHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCC
Confidence 34555555555555554322 35689999999999999988876543 5799999998774
|
This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane |
| >PRK10162 acetyl esterase; Provisional | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00016 Score=66.74 Aligned_cols=38 Identities=26% Similarity=0.109 Sum_probs=31.2
Q ss_pred CCCEEEEEeChhHHHHHHHHHhC------CCceeEEEEecCCcc
Q 013862 35 NRPVYLVGESLGACLALAVAARN------PDMDLVLILANPATS 72 (435)
Q Consensus 35 ~~~~~lvGhS~Gg~va~~~a~~~------p~~v~~lVli~~~~~ 72 (435)
.++++|+|+|+||.+|+.++.+. +.+++++|++.|...
T Consensus 153 ~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~ 196 (318)
T PRK10162 153 MSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYG 196 (318)
T ss_pred hhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccC
Confidence 35899999999999999988753 367899999987643
|
|
| >KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.89 E-value=9.9e-05 Score=68.84 Aligned_cols=61 Identities=15% Similarity=0.151 Sum_probs=52.4
Q ss_pred CCChHHHHH-HHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCC---ceeEEEEecCCcc
Q 013862 12 GHHFTGLLK-LIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPD---MDLVLILANPATS 72 (435)
Q Consensus 12 ~~s~~~~a~-dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~---~v~~lVli~~~~~ 72 (435)
+.|+++++. ||-+.|++.-...+.++++.||||-|+......+...|+ +|+.+++++|...
T Consensus 136 ~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~ 200 (403)
T KOG2624|consen 136 DFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAF 200 (403)
T ss_pred ecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchhh
Confidence 468888766 888888888766666899999999999999999998876 7999999999973
|
|
| >COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00018 Score=62.86 Aligned_cols=114 Identities=21% Similarity=0.249 Sum_probs=83.3
Q ss_pred ChHHHHHHHHHHHHHhhhcC--CCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccccc
Q 013862 14 HFTGLLKLIERTIRSENCRS--SNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSG 91 (435)
Q Consensus 14 s~~~~a~dl~~~l~~l~~~~--~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~ 91 (435)
+..+...|+.+.++.|.... ..+++.++|.||||.+++.++.+.| .+++.|..-+..... .
T Consensus 88 ~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~-------------~--- 150 (236)
T COG0412 88 DPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIAD-------------D--- 150 (236)
T ss_pred CHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCC-------------c---
Confidence 34788889999999986432 2457999999999999999999888 677766554442100 0
Q ss_pred hhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhcc
Q 013862 92 QMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARLD 171 (435)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 171 (435)
.....
T Consensus 151 ---------------------------------------------------------------------------~~~~~ 155 (236)
T COG0412 151 ---------------------------------------------------------------------------TADAP 155 (236)
T ss_pred ---------------------------------------------------------------------------ccccc
Confidence 00123
Q ss_pred cccceEEEEeeCCCCCCCChhHHHHHHhhCC----CceEEEeCCCCccccccC
Q 013862 172 AVKAQTLILCSGRDQLLPSEEEGDRLCRALP----NCQTRRFGGGGHFLFLED 220 (435)
Q Consensus 172 ~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~----~~~~~~i~~~gH~~~~e~ 220 (435)
++++|+|+..|+.|..+|.. ..+.+.+.+. ..++.+++++.|-.+.+.
T Consensus 156 ~~~~pvl~~~~~~D~~~p~~-~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~ 207 (236)
T COG0412 156 KIKVPVLLHLAGEDPYIPAA-DVDALAAALEDAGVKVDLEIYPGAGHGFANDR 207 (236)
T ss_pred cccCcEEEEecccCCCCChh-HHHHHHHHHHhcCCCeeEEEeCCCccccccCC
Confidence 57899999999999999998 4666555443 467899999889877654
|
|
| >PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00023 Score=72.94 Aligned_cols=57 Identities=25% Similarity=0.159 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHhhhcC----------------CCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcc
Q 013862 16 TGLLKLIERTIRSENCRS----------------SNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATS 72 (435)
Q Consensus 16 ~~~a~dl~~~l~~l~~~~----------------~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~ 72 (435)
.+-.+|..++|+.+.... .+.++.++|.|+||.+++.+|...|+.++++|..++...
T Consensus 302 ~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~~~~aAa~~pp~LkAIVp~a~is~ 374 (767)
T PRK05371 302 YQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTLPNAVATTGVEGLETIIPEAAISS 374 (767)
T ss_pred HHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHHHHHHHHhhCCCcceEEEeeCCCCc
Confidence 455778888888886311 146899999999999999999999999999999877643
|
|
| >COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.0002 Score=62.67 Aligned_cols=59 Identities=24% Similarity=0.202 Sum_probs=49.2
Q ss_pred CCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhC---CCceeEEEEecCCcc
Q 013862 11 IGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARN---PDMDLVLILANPATS 72 (435)
Q Consensus 11 ~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~---p~~v~~lVli~~~~~ 72 (435)
...+++++++...+.|....- ..|++|+|||+||.+|..+|.+- .+.|..|+++|+...
T Consensus 43 ~~~~l~~~a~~yv~~Ir~~QP---~GPy~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 43 PFASLDDMAAAYVAAIRRVQP---EGPYVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred ccCCHHHHHHHHHHHHHHhCC---CCCEEEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 346888998888888877755 47999999999999999999763 457999999998865
|
|
| >COG2937 PlsB Glycerol-3-phosphate O-acyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.83 E-value=5e-05 Score=73.26 Aligned_cols=122 Identities=14% Similarity=0.074 Sum_probs=89.7
Q ss_pred CCcEEeccCC--CCC-CCCEEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcchHHHHHHhCCc
Q 013862 278 DGKIVRGLSG--IPS-EGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRIMGSV 354 (435)
Q Consensus 278 ~~~~~~~~~~--~p~-~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 354 (435)
.+.++...+. +-. .-++++|.-|.|. +|.+++...+....-.+.++.+.-.+ .+|.++.++++.|++
T Consensus 279 ~g~~vq~a~r~r~a~~gheiVyvpcHRSh-iDylLLsy~ly~ngLvPpHiaAGINL---------Nf~p~G~i~RR~GAf 348 (810)
T COG2937 279 QGDEVQNAERRRLALDGHEIVYVPCHRSH-IDYLLLSYVLYHNGLVPPHIAAGINL---------NFWPMGPIFRRGGAF 348 (810)
T ss_pred hhhhHHHHHHHHhhhcCCceEEEecchhh-hhHHHHHHHHHhcCCCcchhhccccc---------cCccchHHHHhccce
Confidence 3455554442 122 3479999999997 68877777665443345555555443 234588999999999
Q ss_pred cccHH-------------HHHHHhcCCCeEEEecCccccccccCCccceeecCCchhHHHHHHHc-------CCCEEEEE
Q 013862 355 PVSAI-------------NFYKLVSSKAHVLLYPGGVREAFHRKGEEYKLFWPESSEFVRVAAAF-------GGKIVPFG 414 (435)
Q Consensus 355 ~~~r~-------------~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~~~~~~~~g~~~~a~~~-------~~~ivPv~ 414 (435)
.+-|. -..+.+.+|.++=-|-||+|+ ++|.+.. -|.|...+-.++ .+-+|||+
T Consensus 349 FIRRsfKgn~LYs~VfrEYl~~Lf~rgysleyfIEGGRS---RTGrlL~----PKtGmlsmtlqA~Lrg~~rpI~lvPvy 421 (810)
T COG2937 349 FIRRTFKGNPLYSTVFREYLGELFSRGYSLEYFIEGGRS---RTGRLLP----PKTGMLSMTLQAMLRGRTRPILLVPVY 421 (810)
T ss_pred EEEeccCCChhHHHHHHHHHHHHHhCCcceEEEeecCcc---ccCCcCC----CccchHHHHHHHHhcCCCCCeEEEeeE
Confidence 99876 567788999999999999999 9998777 899988777666 46689999
Q ss_pred Ee
Q 013862 415 VV 416 (435)
Q Consensus 415 ~~ 416 (435)
|-
T Consensus 422 Ig 423 (810)
T COG2937 422 IG 423 (810)
T ss_pred ee
Confidence 83
|
|
| >KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.00027 Score=63.36 Aligned_cols=63 Identities=16% Similarity=0.232 Sum_probs=57.3
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEec
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILAN 68 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~ 68 (435)
||.|..+...+.+..+.|.-+..++-.|+. .++.+=|-.||+.|+..+|..+|++|.++=+-.
T Consensus 199 ygwSd~~sk~GFn~~a~ArvmrkLMlRLg~----nkffiqGgDwGSiI~snlasLyPenV~GlHlnm 261 (469)
T KOG2565|consen 199 YGWSDAPSKTGFNAAATARVMRKLMLRLGY----NKFFIQGGDWGSIIGSNLASLYPENVLGLHLNM 261 (469)
T ss_pred cccCcCCccCCccHHHHHHHHHHHHHHhCc----ceeEeecCchHHHHHHHHHhhcchhhhHhhhcc
Confidence 899999999999999999999999999988 489999999999999999999999998876543
|
|
| >PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.80 E-value=5.4e-05 Score=56.73 Aligned_cols=62 Identities=19% Similarity=0.343 Sum_probs=54.8
Q ss_pred cceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhcccccccc
Q 013862 174 KAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRRGR 238 (435)
Q Consensus 174 ~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~~~ 238 (435)
..|+|++.++.|+.+|.+ .++.+++.+++++++.+++.||..+...-.-+.+.+.+ ||....
T Consensus 34 ~~piL~l~~~~Dp~TP~~-~a~~~~~~l~~s~lvt~~g~gHg~~~~~s~C~~~~v~~--yl~~G~ 95 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYE-GARAMAARLPGSRLVTVDGAGHGVYAGGSPCVDKAVDD--YLLDGT 95 (103)
T ss_pred CCCEEEEecCcCCCCcHH-HHHHHHHHCCCceEEEEeccCcceecCCChHHHHHHHH--HHHcCC
Confidence 589999999999999999 89999999999999999999999987555667888888 887554
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity |
| >TIGR00976 /NonD putative hydrolase, CocE/NonD family | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00027 Score=70.48 Aligned_cols=58 Identities=12% Similarity=-0.078 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHHhhhc-CCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccc
Q 013862 16 TGLLKLIERTIRSENCR-SSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSF 73 (435)
Q Consensus 16 ~~~a~dl~~~l~~l~~~-~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~ 73 (435)
.+.++|+.++++.+... ..+.++.++|||+||.+++.+|..+|++++++|..++....
T Consensus 76 ~~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d~ 134 (550)
T TIGR00976 76 SDEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWDL 134 (550)
T ss_pred cccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccch
Confidence 56788999999988553 22458999999999999999999999999999998877543
|
This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases. |
| >KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.70 E-value=5.3e-05 Score=63.09 Aligned_cols=110 Identities=22% Similarity=0.283 Sum_probs=80.8
Q ss_pred CChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccccch
Q 013862 13 HHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQ 92 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (435)
.+.+-.-.++..+++.+......+++-++|.+|||-++..+....| .+.+.|..=|...
T Consensus 97 ~~~~~~~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~-------------------- 155 (242)
T KOG3043|consen 97 HSPPKIWKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFV-------------------- 155 (242)
T ss_pred CCcccchhHHHHHHHHHHHcCCcceeeEEEEeecceEEEEeeccch-hheeeeEecCCcC--------------------
Confidence 4666677888999999987666789999999999998887777766 4555554433310
Q ss_pred hHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhccc
Q 013862 93 MTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARLDA 172 (435)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 172 (435)
+ .+...+
T Consensus 156 --------------------------------------d-----------------------------------~~D~~~ 162 (242)
T KOG3043|consen 156 --------------------------------------D-----------------------------------SADIAN 162 (242)
T ss_pred --------------------------------------C-----------------------------------hhHHhc
Confidence 0 123445
Q ss_pred ccceEEEEeeCCCCCCCChhHHHHHHhhCC-----CceEEEeCCCCcccc
Q 013862 173 VKAQTLILCSGRDQLLPSEEEGDRLCRALP-----NCQTRRFGGGGHFLF 217 (435)
Q Consensus 173 i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~-----~~~~~~i~~~gH~~~ 217 (435)
+++|+|++.|+.|.++|+. ....+.+.+. +.+++++++-+|-..
T Consensus 163 vk~Pilfl~ae~D~~~p~~-~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~ 211 (242)
T KOG3043|consen 163 VKAPILFLFAELDEDVPPK-DVKAWEEKLKENPAVGSQVKTFSGVGHGFV 211 (242)
T ss_pred CCCCEEEEeecccccCCHH-HHHHHHHHHhcCcccceeEEEcCCccchhh
Confidence 6899999999999999998 5666666553 237999999999654
|
|
| >PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively [] | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.0017 Score=58.48 Aligned_cols=60 Identities=22% Similarity=0.068 Sum_probs=45.9
Q ss_pred hHHHHHHHHHHHHHhhhc-CCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccc
Q 013862 15 FTGLLKLIERTIRSENCR-SSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFR 74 (435)
Q Consensus 15 ~~~~a~dl~~~l~~l~~~-~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~ 74 (435)
..+-++|..++|+.+... -.+.+|-++|.|++|..++..|+..|..+++++...+....-
T Consensus 79 ~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~ 139 (272)
T PF02129_consen 79 SPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLY 139 (272)
T ss_dssp SHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTC
T ss_pred ChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCccc
Confidence 455677888888777543 224589999999999999999999999999999987765443
|
It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A .... |
| >PLN02349 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=97.64 E-value=5.3e-05 Score=68.45 Aligned_cols=59 Identities=15% Similarity=0.193 Sum_probs=41.8
Q ss_pred HHHHHhcC-CCeEEEecCcccccccc-CCccceeecCCchh----HHHHHHHcCCC--EEEEEEecchhh
Q 013862 360 NFYKLVSS-KAHVLLYPGGVREAFHR-KGEEYKLFWPESSE----FVRVAAAFGGK--IVPFGVVGEDDL 421 (435)
Q Consensus 360 ~~~~~l~~-g~~~~ifPeG~~~~~~~-~~~~~~~~~~~~~g----~~~~a~~~~~~--ivPv~~~g~~~~ 421 (435)
.+...|++ |..++|||||+|..... +|+...-+ |-.- +-+++.++++| +.|.++. ++++
T Consensus 285 ~~~~lL~~Gg~~iwIaPsGgRdR~d~~~g~~~pap--FD~~svd~mR~l~~~s~~ptHfYPlAl~-~yDI 351 (426)
T PLN02349 285 EMALLLREGGQLIWIAPSGGRDRPDPLTGEWTPAP--FDPSAVDNMRRLTEKSKAPGHFYPLAML-SYDI 351 (426)
T ss_pred HHHHHHhcCCeEEEEeCCCCCCCCCccCCCccCCC--CChHHHHHHHHHHHhcCCCccccchHHH-hCcc
Confidence 55667888 67999999999996655 66655544 5544 56778888887 7777664 4443
|
|
| >KOG3729 consensus Mitochondrial glycerol-3-phosphate acyltransferase GPAT [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00019 Score=66.84 Aligned_cols=109 Identities=17% Similarity=0.146 Sum_probs=81.0
Q ss_pred CCCEEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcchHHHHHHhCCccccHH-----------
Q 013862 291 EGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRIMGSVPVSAI----------- 359 (435)
Q Consensus 291 ~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~----------- 359 (435)
.-|.|++.=|.|- +|.+++...+ ..++++.-.+|...-... |+|+++++.+|+..+.|+
T Consensus 157 g~PliFlPlHRSH-lDYlliTwIL-~~~~Ik~P~iAsGNNLnI--------P~Fg~Llr~LGaFFIrRriDp~~~G~KDV 226 (715)
T KOG3729|consen 157 GIPMVFLPLHRSH-LDYLLITWIL-WHFGIKLPHIASGNNLNI--------PGFGWLLRALGAFFIRRRVDPDDEGGKDV 226 (715)
T ss_pred CCceEEEecchhh-hhHHHHHHHH-HhcCcCCceeccCCcccc--------chHHHHHHhcchheeeeccCCCcccchhH
Confidence 4589999999985 6775554433 444555566666554433 448999999999998876
Q ss_pred --------HHHHHhcCCCeEEEecCccccccccCCccceeecCCchhHHHHHHHc---C----CCEEEEEEe
Q 013862 360 --------NFYKLVSSKAHVLLYPGGVREAFHRKGEEYKLFWPESSEFVRVAAAF---G----GKIVPFGVV 416 (435)
Q Consensus 360 --------~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~~~~~~~~g~~~~a~~~---~----~~ivPv~~~ 416 (435)
.+.++|++|..|=+|=||||+ +.|+.-. -|.|......++ | +=+|||.+.
T Consensus 227 LYRA~LH~yi~~~L~Q~~~iEfFlEGtRs---R~GK~~~----pk~GlLSVvV~a~~~g~IPD~LlvPVs~~ 291 (715)
T KOG3729|consen 227 LYRAILHSYIEQVLSQDMPIEFFLEGTRS---RFGKALT----PKNGLLSVVVEAVQHGFIPDCLLVPVSYT 291 (715)
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEecccc---ccCCcCC----cccccHHHHHHHHhcCCCCceEEEeeecc
Confidence 678999999999999999999 8887665 678866555544 3 349999874
|
|
| >PF10503 Esterase_phd: Esterase PHB depolymerase | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.0012 Score=56.75 Aligned_cols=37 Identities=24% Similarity=0.336 Sum_probs=33.5
Q ss_pred CCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCc
Q 013862 35 NRPVYLVGESLGACLALAVAARNPDMDLVLILANPAT 71 (435)
Q Consensus 35 ~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~ 71 (435)
..++++.|+|.||+.+..+++.+|+.+.++...++..
T Consensus 96 ~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~ 132 (220)
T PF10503_consen 96 PSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVP 132 (220)
T ss_pred CCceeeEEECHHHHHHHHHHHhCCccceEEEeecccc
Confidence 5689999999999999999999999999988877663
|
|
| >PRK04940 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.0079 Score=49.43 Aligned_cols=57 Identities=14% Similarity=0.070 Sum_probs=39.0
Q ss_pred CChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcc
Q 013862 13 HHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATS 72 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~ 72 (435)
.+..+..+.+.+.+..+......+++.|||+|+||+.|..+|.++. + +.|+++|+..
T Consensus 37 ~~P~~a~~~l~~~i~~~~~~~~~~~~~liGSSLGGyyA~~La~~~g--~-~aVLiNPAv~ 93 (180)
T PRK04940 37 LHPKHDMQHLLKEVDKMLQLSDDERPLICGVGLGGYWAERIGFLCG--I-RQVIFNPNLF 93 (180)
T ss_pred CCHHHHHHHHHHHHHHhhhccCCCCcEEEEeChHHHHHHHHHHHHC--C-CEEEECCCCC
Confidence 3444555556666654322111247899999999999999999986 3 5688999853
|
|
| >KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.53 E-value=7.2e-05 Score=61.26 Aligned_cols=52 Identities=13% Similarity=0.183 Sum_probs=41.9
Q ss_pred hhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccC
Q 013862 168 ARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLED 220 (435)
Q Consensus 168 ~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~ 220 (435)
+.+..++.|+|++.|++|.-.-.+ ..+.+.+....+++..++|.+|+-.+|+
T Consensus 201 ~~~~~v~~~ilVv~~~~espklie-Qnrdf~~q~~~a~~~~f~n~~hy~I~~~ 252 (270)
T KOG4627|consen 201 WEYTDVTVWILVVAAEHESPKLIE-QNRDFADQLRKASFTLFKNYDHYDIIEE 252 (270)
T ss_pred HHhcCceeeeeEeeecccCcHHHH-hhhhHHHHhhhcceeecCCcchhhHHHH
Confidence 456678999999999999755555 5677888888899999999999866553
|
|
| >cd00741 Lipase Lipase | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00032 Score=57.08 Aligned_cols=57 Identities=18% Similarity=0.165 Sum_probs=42.9
Q ss_pred hHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCC----ceeEEEEecCCc
Q 013862 15 FTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPD----MDLVLILANPAT 71 (435)
Q Consensus 15 ~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~----~v~~lVli~~~~ 71 (435)
+..+.+.+...++.....+++.+++++|||+||.+|..++..... .+..++..+++.
T Consensus 7 ~~~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 7 ARSLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 455666777777766554567899999999999999999887754 566677777664
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PF03279 Lip_A_acyltrans: Bacterial lipid A biosynthesis acyltransferase; InterPro: IPR004960 Bacterial lipopolysachharides (LPS) are glycolipids that make up the outer monolayer of the outer membranes of most Gram-negative bacteria | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00033 Score=63.96 Aligned_cols=130 Identities=15% Similarity=0.030 Sum_probs=78.9
Q ss_pred CCcEEeccCCCC----CCCCEEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcchHHHH----H
Q 013862 278 DGKIVRGLSGIP----SEGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTF----R 349 (435)
Q Consensus 278 ~~~~~~~~~~~p----~~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 349 (435)
..++++|.|++. ..+|+|+++.|... .+....... ..+.++..+.++. ++| .+..++ .
T Consensus 103 ~~~~~~g~e~l~~a~~~g~gvIl~t~H~Gn-wE~~~~~l~---~~~~~~~~i~~~~--~n~--------~~~~~~~~~R~ 168 (295)
T PF03279_consen 103 KRVEIEGEEHLEAALAEGRGVILLTGHFGN-WELAGRALA---RRGPPVAVIYRPQ--KNP--------YIDRLLNKLRE 168 (295)
T ss_pred eEEEEECHHHHHHHHhcCCCCEEeCcCcCh-HHHHHHHHH---hhCCceEEEecCC--ccH--------hHHHHHHHHHH
Confidence 456788988876 47899999999854 354332222 1233456665553 121 133333 3
Q ss_pred HhCCccccHH----HHHHHhcCCCeEEEecCcccccc-ccCCccceeecCCchhHHHHHHHcCCCEEEEEEecchhh
Q 013862 350 IMGSVPVSAI----NFYKLVSSKAHVLLYPGGVREAF-HRKGEEYKLFWPESSEFVRVAAAFGGKIVPFGVVGEDDL 421 (435)
Q Consensus 350 ~~g~~~~~r~----~~~~~l~~g~~~~ifPeG~~~~~-~~~~~~~~~~~~~~~g~~~~a~~~~~~ivPv~~~g~~~~ 421 (435)
..|.--++++ ++.++|++|+.|++.+....... ....+.......+-.|.++||.++|+||||+++.=..+-
T Consensus 169 ~~g~~~i~~~~~~~~~~~~Lk~g~~v~~l~Dq~~~~~~~~~v~FfG~~a~~~~g~a~lA~~~~apvvp~~~~r~~~~ 245 (295)
T PF03279_consen 169 RFGIELIPKGEGIRELIRALKEGGIVGLLGDQDPGKKDGVFVPFFGRPASTPTGPARLARKTGAPVVPVFAYREPDG 245 (295)
T ss_pred hcCCeEecchhhHHHHHHHhccCCEEEEEECCCCCCCCceEEeECCeecccccHHHHHHHHhCCcEEEEEEEEeCCC
Confidence 3344333333 78899999999999987533210 001111122223678999999999999999999655443
|
Though LPS moleculesare variable, they all show the same general features: an outer polysaccharide which is attached to the lipid component, termed lipid A []. The polysaccharide component consists of a variable repeat-structure polysaccharide known as the O-antigen, and a highly conserved short core oligosaccharide which connects the O-antigen to lipid A. Lipid A is a glucosamine-based phospholipid that makes up the membrane anchor region of LPS []. The structure of lipid A is relatively invariant between species, presumably reflecting its fundamental role in membrane integrity. Recognition of lipid A by the innate immune system can lead to a response even at picomolar levels. In some genera, such as Neisseria and Haemophilus, lipooligosaccharides (LOS) are the predominant glycolipids []. These are analogous to LPS except that they lack O-antigens, with the LOS oligosaccharide structures limited to 10 saccharide units. The bacterial lipid A biosynthesis protein, or lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 2.3.1 from EC, transfers myristate or laurate, activated on ACP, to the lipid IVA moiety of (KDO)2-(lauroyl)-lipid IVA during lipopolysaccharide core biosynthesis.; GO: 0016746 transferase activity, transferring acyl groups, 0009244 lipopolysaccharide core region biosynthetic process, 0016021 integral to membrane |
| >COG1560 HtrB Lauroyl/myristoyl acyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00046 Score=62.23 Aligned_cols=122 Identities=19% Similarity=0.125 Sum_probs=75.5
Q ss_pred CCcEEeccCCCCC----CCCEEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcchHHHH----H
Q 013862 278 DGKIVRGLSGIPS----EGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTF----R 349 (435)
Q Consensus 278 ~~~~~~~~~~~p~----~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 349 (435)
..++++|.|++.+ ++++|+++-|... +|+...... .....+..+.++- ++| .+.+++ .
T Consensus 105 ~~~~v~g~e~l~e~l~~~~gvIl~~~H~gn-~E~~~~~l~---~~~~~~~~~yrp~--~np--------~ld~~i~~~R~ 170 (308)
T COG1560 105 RRVEVEGLEHLEEALANGRGVILVTPHFGN-WELGGRALA---QQGPKVTAMYRPP--KNP--------LLDWLITRGRE 170 (308)
T ss_pred ceeeecCHHHHHHHHHcCCCEEEEecCcch-HHHHHHHHH---HhCCCeeEEecCC--CCH--------HHHHHHHHHHH
Confidence 3578999988764 6799999999854 466443333 2222333333322 111 133333 3
Q ss_pred HhCCccccH-----HHHHHHhcCCCeEEEecCccccccccCCccceeec-----CCchhHHHHHHHcCCCEEEEEEec
Q 013862 350 IMGSVPVSA-----INFYKLVSSKAHVLLYPGGVREAFHRKGEEYKLFW-----PESSEFVRVAAAFGGKIVPFGVVG 417 (435)
Q Consensus 350 ~~g~~~~~r-----~~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~~~~-----~~~~g~~~~a~~~~~~ivPv~~~g 417 (435)
..|.--+.+ +...++|++|+.|++-|.=..+ + ++....++ .--+|..+||.+++++|||+++.=
T Consensus 171 r~~~~~~~~~~~~ir~li~~Lk~G~~v~~lpDqd~~---~-~~~vfvpFFg~~a~T~t~~~~LA~~~~a~vip~~~~r 244 (308)
T COG1560 171 RFGGRLLPRKGEGIRQLIKALKQGEAVGYLPDQDYG---P-GESVFVPFFGVPAATTTGPAKLARLTGAAVVPVFPVR 244 (308)
T ss_pred hcCCcccCCCchhHHHHHHHHhcCCeEEEecCcccC---C-CCCeEeccCCCcccccchHHHHHHHhCCCEEEEEEEE
Confidence 334434444 2888999999999999975444 2 11111111 124899999999999999999874
|
|
| >PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0027 Score=53.90 Aligned_cols=191 Identities=19% Similarity=0.163 Sum_probs=86.7
Q ss_pred CCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccccccccccccccccc
Q 013862 11 IGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMS 90 (435)
Q Consensus 11 ~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~ 90 (435)
+.+|+....+++..+++.+.. .+..++-|+.-|+.|.+|+..|.+- .+.-+|..-+......
T Consensus 77 ~eftms~g~~sL~~V~dwl~~-~g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaVGVVnlr~--------------- 138 (294)
T PF02273_consen 77 NEFTMSIGKASLLTVIDWLAT-RGIRRIGLIAASLSARIAYEVAADI--NLSFLITAVGVVNLRD--------------- 138 (294)
T ss_dssp ----HHHHHHHHHHHHHHHHH-TT---EEEEEETTHHHHHHHHTTTS----SEEEEES--S-HHH---------------
T ss_pred hhcchHHhHHHHHHHHHHHHh-cCCCcchhhhhhhhHHHHHHHhhcc--CcceEEEEeeeeeHHH---------------
Confidence 458999999999999999984 4556799999999999999999854 4777777665533211
Q ss_pred chhHHHHHHHHHhhcCChhHHHHHhh------hhc-cchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhh
Q 013862 91 GQMTLTLSYLLSLLTGDPLKMAMDSI------VKG-LFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSAS 163 (435)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (435)
.+...+. .+......... ... ...+.+.+ +.+...+..+
T Consensus 139 -----TLe~al~---~Dyl~~~i~~lp~dldfeGh~l~~~vFv~----------------------dc~e~~w~~l---- 184 (294)
T PF02273_consen 139 -----TLEKALG---YDYLQLPIEQLPEDLDFEGHNLGAEVFVT----------------------DCFEHGWDDL---- 184 (294)
T ss_dssp -----HHHHHHS---S-GGGS-GGG--SEEEETTEEEEHHHHHH----------------------HHHHTT-SSH----
T ss_pred -----HHHHHhc---cchhhcchhhCCCcccccccccchHHHHH----------------------HHHHcCCccc----
Confidence 1111111 01110000000 000 00000000 0000000001
Q ss_pred hhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhC--CCceEEEeCCCCccccccCch---hHHHHHhhcccccccc
Q 013862 164 AYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRAL--PNCQTRRFGGGGHFLFLEDGV---DLVTTIKGAGYYRRGR 238 (435)
Q Consensus 164 ~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~pe---~~~~~I~~~~Fl~~~~ 238 (435)
......++.+.+|++.+.+++|.++... ...++.+.+ +.+++..++|++|.+. |+|- .|.+.+...+---...
T Consensus 185 ~ST~~~~k~l~iP~iaF~A~~D~WV~q~-eV~~~~~~~~s~~~klysl~Gs~HdL~-enl~vlrnfy~svtkaaiald~~ 262 (294)
T PF02273_consen 185 DSTINDMKRLSIPFIAFTANDDDWVKQS-EVEELLDNINSNKCKLYSLPGSSHDLG-ENLVVLRNFYQSVTKAAIALDSG 262 (294)
T ss_dssp HHHHHHHTT--S-EEEEEETT-TTS-HH-HHHHHHTT-TT--EEEEEETT-SS-TT-SSHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhHHHHHhhCCCCEEEEEeCCCccccHH-HHHHHHHhcCCCceeEEEecCccchhh-hChHHHHHHHHHHHHHHHhhcCC
Confidence 1123567778999999999999999988 577777744 4568999999999875 4552 2333333211111222
Q ss_pred ccccccccCCCChHHHH
Q 013862 239 IVDYVSDFIPPTTIEVN 255 (435)
Q Consensus 239 ~~~~~~~~~~p~~~~~~ 255 (435)
..+...+.+.|..+.++
T Consensus 263 ~~~l~~~~~ep~fe~lt 279 (294)
T PF02273_consen 263 SLDLDIDIIEPTFEDLT 279 (294)
T ss_dssp ------------HHHHH
T ss_pred ceeeeccccCCCHHHHH
Confidence 33444455667655544
|
Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B. |
| >COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00079 Score=57.93 Aligned_cols=161 Identities=15% Similarity=0.006 Sum_probs=88.3
Q ss_pred CCCChHHHHHHHHHHHHHhhhc--CCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccccccccccccccc
Q 013862 11 IGHHFTGLLKLIERTIRSENCR--SSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAEL 88 (435)
Q Consensus 11 ~~~s~~~~a~dl~~~l~~l~~~--~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~ 88 (435)
++|-+.....|+...++.+... -..+++.+.|.|.||.+++.+++..| ++++++.+-|...--.. . ++.
T Consensus 149 d~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl~df~r-------~-i~~ 219 (321)
T COG3458 149 DTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFLSDFPR-------A-IEL 219 (321)
T ss_pred CceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhcccccccccccchh-------h-eee
Confidence 3444555555666655554321 12468999999999999999888776 78888877665321100 0 111
Q ss_pred ccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhh
Q 013862 89 MSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANA 168 (435)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (435)
........+...+.. ....+. +....+ +. -+...
T Consensus 220 ~~~~~ydei~~y~k~---------------h~~~e~---~v~~TL-----------------------~y-----fD~~n 253 (321)
T COG3458 220 ATEGPYDEIQTYFKR---------------HDPKEA---EVFETL-----------------------SY-----FDIVN 253 (321)
T ss_pred cccCcHHHHHHHHHh---------------cCchHH---HHHHHH-----------------------hh-----hhhhh
Confidence 111111111111110 000000 000000 00 01123
Q ss_pred hcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCc-eEEEeCCCCccccccCchhHHHHHhh
Q 013862 169 RLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNC-QTRRFGGGGHFLFLEDGVDLVTTIKG 230 (435)
Q Consensus 169 ~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~-~~~~i~~~gH~~~~e~pe~~~~~I~~ 230 (435)
...++++|+|+..|-.|+++|+. .+-.+.+.++.. ++.+++.-+|. +-|.-..+.+..
T Consensus 254 ~A~RiK~pvL~svgL~D~vcpPs-tqFA~yN~l~~~K~i~iy~~~aHe---~~p~~~~~~~~~ 312 (321)
T COG3458 254 LAARIKVPVLMSVGLMDPVCPPS-TQFAAYNALTTSKTIEIYPYFAHE---GGPGFQSRQQVH 312 (321)
T ss_pred HHHhhccceEEeecccCCCCCCh-hhHHHhhcccCCceEEEeeccccc---cCcchhHHHHHH
Confidence 45678999999999999999999 677788877765 56667755564 344444444444
|
|
| >PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2 | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.00032 Score=66.32 Aligned_cols=56 Identities=14% Similarity=0.147 Sum_probs=47.0
Q ss_pred hHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCC------ceeEEEEecCCc
Q 013862 15 FTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPD------MDLVLILANPAT 71 (435)
Q Consensus 15 ~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~------~v~~lVli~~~~ 71 (435)
.+++...+.+.|+...... ++|++||||||||.++..+....+. .|+++|.++++.
T Consensus 99 ~~~~~~~lk~~ie~~~~~~-~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~ 160 (389)
T PF02450_consen 99 RDEYFTKLKQLIEEAYKKN-GKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPF 160 (389)
T ss_pred HHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCC
Confidence 4478888888888876655 6899999999999999999888753 599999999874
|
3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process |
| >PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.002 Score=61.99 Aligned_cols=59 Identities=15% Similarity=0.190 Sum_probs=44.4
Q ss_pred cceEEEEeeCCCCCCCChhHHHHHHhhCC--------------------------CceEEEeCCCCccccccCchhHHHH
Q 013862 174 KAQTLILCSGRDQLLPSEEEGDRLCRALP--------------------------NCQTRRFGGGGHFLFLEDGVDLVTT 227 (435)
Q Consensus 174 ~~Pvlii~G~~D~~~~~~~~~~~~~~~~~--------------------------~~~~~~i~~~gH~~~~e~pe~~~~~ 227 (435)
.++||+..|..|.+++.. ..+.+.+.+. +.+++.+.+|||+++.++|++..+.
T Consensus 330 ~irVLiy~Gd~D~i~n~~-Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~dqP~~a~~m 408 (415)
T PF00450_consen 330 GIRVLIYNGDLDLICNFL-GTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQDQPEAALQM 408 (415)
T ss_dssp T-EEEEEEETT-SSS-HH-HHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHHHSHHHHHHH
T ss_pred cceeEEeccCCCEEEEec-cchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChhhCHHHHHHH
Confidence 489999999999999987 5666665432 3467889999999999999999999
Q ss_pred Hhhccccc
Q 013862 228 IKGAGYYR 235 (435)
Q Consensus 228 I~~~~Fl~ 235 (435)
++. |++
T Consensus 409 ~~~--fl~ 414 (415)
T PF00450_consen 409 FRR--FLK 414 (415)
T ss_dssp HHH--HHC
T ss_pred HHH--Hhc
Confidence 999 664
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A .... |
| >PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.004 Score=57.52 Aligned_cols=61 Identities=21% Similarity=0.372 Sum_probs=49.7
Q ss_pred ccccceEEEEeeCCCCCCCChhHHHHHHhhCCCc-eEEEeCCCCccccccCchhHHHHHhhccccccc
Q 013862 171 DAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNC-QTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRRG 237 (435)
Q Consensus 171 ~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~-~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~~ 237 (435)
.++++|.++|.|..|.+..++ ....+.+.+|+- .+..+||++|..-. ..+.+.+.. |+.+.
T Consensus 259 ~rL~~PK~ii~atgDeFf~pD-~~~~y~d~L~G~K~lr~vPN~~H~~~~---~~~~~~l~~--f~~~~ 320 (367)
T PF10142_consen 259 DRLTMPKYIINATGDEFFVPD-SSNFYYDKLPGEKYLRYVPNAGHSLIG---SDVVQSLRA--FYNRI 320 (367)
T ss_pred HhcCccEEEEecCCCceeccC-chHHHHhhCCCCeeEEeCCCCCcccch---HHHHHHHHH--HHHHH
Confidence 556999999999999999999 688888888864 68899999999876 566666777 76554
|
Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily. |
| >PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0013 Score=54.19 Aligned_cols=57 Identities=12% Similarity=0.062 Sum_probs=49.2
Q ss_pred hHHHHHHHHHHHHHhhhcC-CCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCc
Q 013862 15 FTGLLKLIERTIRSENCRS-SNRPVYLVGESLGACLALAVAARNPDMDLVLILANPAT 71 (435)
Q Consensus 15 ~~~~a~dl~~~l~~l~~~~-~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~ 71 (435)
-++-+.+|..|++.|...+ ++..+.++|||+|+.++-..+...+..+..+|++++++
T Consensus 87 A~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG 144 (177)
T PF06259_consen 87 ARAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPG 144 (177)
T ss_pred HHHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCC
Confidence 5677889999999988766 66789999999999999988888778899999998775
|
Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates. |
| >PRK06553 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0028 Score=58.05 Aligned_cols=124 Identities=13% Similarity=0.046 Sum_probs=73.5
Q ss_pred CCcEEeccCCCC----CCCCEEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcchHHHHH----
Q 013862 278 DGKIVRGLSGIP----SEGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFR---- 349 (435)
Q Consensus 278 ~~~~~~~~~~~p----~~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 349 (435)
..++++|.|++. +.+++|+++-|... ++.+..... ..+.++..+.++.- +| .+..++.
T Consensus 115 ~~~~~~g~e~l~~a~a~gkgvIllt~H~Gn-WE~~~~~l~---~~~~~~~~vyr~~~--n~--------~~d~~i~~~R~ 180 (308)
T PRK06553 115 GRVEVRGIEIFERLRDDGKPALIFTAHLGN-WELLAIAAA---AFGLDVTVLFRPPN--NP--------YAARKVLEARR 180 (308)
T ss_pred CeeEecCHHHHHHHHhcCCCEEEEeeCchH-HHHHHHHHH---HcCCceEEEEecCC--Ch--------HHHHHHHHHHH
Confidence 356788887765 35789999999854 366433222 22334666655432 22 1434433
Q ss_pred HhCCccc--cHH---HHHHHhcCCCeEEEecCccccccccCCccceeecCCchhHHHHHHHcCCCEEEEEEe
Q 013862 350 IMGSVPV--SAI---NFYKLVSSKAHVLLYPGGVREAFHRKGEEYKLFWPESSEFVRVAAAFGGKIVPFGVV 416 (435)
Q Consensus 350 ~~g~~~~--~r~---~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~ivPv~~~ 416 (435)
..|...+ +++ ++.++|++|+.++|.|--..+.. ..-.....+-..-+|.++||.++|+||||+++.
T Consensus 181 ~~g~~~i~~~~~~~r~l~r~Lk~g~~v~il~DQ~~~~g-v~v~FFG~~a~t~~~~a~LA~~~~apVvp~~~~ 251 (308)
T PRK06553 181 TTMGGLVPSGAGAAFALAGVLERGGHVGMLVDQKFTRG-VEVTFFGRPVKTNPLLAKLARQYDCPVHGARCI 251 (308)
T ss_pred HcCCCcccCCChHHHHHHHHHHcCCeEEEEecccCCCC-ceeccCCCcCCCCchHHHHHHHHCCCEEEEEEE
Confidence 2333222 232 77889999999999964321100 000111111225689999999999999999996
|
|
| >PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.00098 Score=59.27 Aligned_cols=53 Identities=25% Similarity=0.242 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCc
Q 013862 18 LLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPAT 71 (435)
Q Consensus 18 ~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~ 71 (435)
+.++|...|++.-...++ +..|+|+||||..|+.++.+||+.+.+++.++|..
T Consensus 98 l~~el~p~i~~~~~~~~~-~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~ 150 (251)
T PF00756_consen 98 LTEELIPYIEANYRTDPD-RRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGAL 150 (251)
T ss_dssp HHTHHHHHHHHHSSEEEC-CEEEEEETHHHHHHHHHHHHSTTTESEEEEESEES
T ss_pred hhccchhHHHHhcccccc-eeEEeccCCCcHHHHHHHHhCccccccccccCccc
Confidence 445666666654222222 27899999999999999999999999999999874
|
; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D .... |
| >PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.014 Score=49.54 Aligned_cols=35 Identities=31% Similarity=0.249 Sum_probs=27.3
Q ss_pred CCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcc
Q 013862 36 RPVYLVGESLGACLALAVAARNPDMDLVLILANPATS 72 (435)
Q Consensus 36 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~ 72 (435)
+.++|||+|||-.+|..+....| ++.-|.+++...
T Consensus 57 ~~i~lvAWSmGVw~A~~~l~~~~--~~~aiAINGT~~ 91 (213)
T PF04301_consen 57 REIYLVAWSMGVWAANRVLQGIP--FKRAIAINGTPY 91 (213)
T ss_pred ceEEEEEEeHHHHHHHHHhccCC--cceeEEEECCCC
Confidence 68999999999999988765543 667777777653
|
|
| >KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0018 Score=61.89 Aligned_cols=122 Identities=16% Similarity=0.204 Sum_probs=85.1
Q ss_pred CChHHHHHHHHHHHH----HhhhcCCCCCEEEEEeChhHHHHHHHHHhCCC-ceeEEEEecCCccccccccccccccccc
Q 013862 13 HHFTGLLKLIERTIR----SENCRSSNRPVYLVGESLGACLALAVAARNPD-MDLVLILANPATSFRKSLLQTIMPIPAE 87 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~----~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~-~v~~lVli~~~~~~~~~~~~~~~~~~~~ 87 (435)
.++...++.+..+.. ++.-.++..+++|+|.|||+.++.+......+ .|+++|.++-+......+
T Consensus 223 ~nI~h~ae~~vSf~r~kvlei~gefpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdgp---------- 292 (784)
T KOG3253|consen 223 ANIKHAAEYSVSFDRYKVLEITGEFPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDGP---------- 292 (784)
T ss_pred cchHHHHHHHHHHhhhhhhhhhccCCCCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCcc----------
Confidence 456666666666655 33445667899999999999998888766543 488888776552110000
Q ss_pred cccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhh
Q 013862 88 LMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYAN 167 (435)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (435)
+ . + ..
T Consensus 293 -----------------------------------r--------g--------------i------------------rD 297 (784)
T KOG3253|consen 293 -----------------------------------R--------G--------------I------------------RD 297 (784)
T ss_pred -----------------------------------c--------C--------------C------------------cc
Confidence 0 0 0 01
Q ss_pred hhcccccceEEEEeeCCCCCCCChhHHHHHHhhCC-CceEEEeCCCCccccccC
Q 013862 168 ARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALP-NCQTRRFGGGGHFLFLED 220 (435)
Q Consensus 168 ~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~ 220 (435)
+.+-.++.|+|++.|..|..+++. ..+.+++++. ..+++++.+++|.+-.-.
T Consensus 298 E~Lldmk~PVLFV~Gsnd~mcspn-~ME~vreKMqA~~elhVI~~adhsmaipk 350 (784)
T KOG3253|consen 298 EALLDMKQPVLFVIGSNDHMCSPN-SMEEVREKMQAEVELHVIGGADHSMAIPK 350 (784)
T ss_pred hhhHhcCCceEEEecCCcccCCHH-HHHHHHHHhhccceEEEecCCCccccCCc
Confidence 334456889999999999999998 6888887764 468999999999876544
|
|
| >KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0032 Score=64.60 Aligned_cols=152 Identities=13% Similarity=0.168 Sum_probs=92.6
Q ss_pred CChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCce-eEEEEecCCccccccccccccccccccccc
Q 013862 13 HHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMD-LVLILANPATSFRKSLLQTIMPIPAELMSG 91 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v-~~lVli~~~~~~~~~~~~~~~~~~~~~~~~ 91 (435)
...+|....+..+++..-+ ..+++.+.|+|+||++++..+...|+.+ +..+.++|..... +..
T Consensus 587 ~ev~D~~~~~~~~~~~~~i--D~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~--------------~yd 650 (755)
T KOG2100|consen 587 VEVKDQIEAVKKVLKLPFI--DRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWL--------------YYD 650 (755)
T ss_pred cchHHHHHHHHHHHhcccc--cHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeee--------------eec
Confidence 4677777777777776633 2468999999999999999999998554 5448898886422 000
Q ss_pred hhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhcc
Q 013862 92 QMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARLD 171 (435)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 171 (435)
... .... .+.+ ... ... +... .....+.
T Consensus 651 s~~--tery----mg~p-------------~~~-~~~-y~e~-------------------------------~~~~~~~ 678 (755)
T KOG2100|consen 651 STY--TERY----MGLP-------------SEN-DKG-YEES-------------------------------SVSSPAN 678 (755)
T ss_pred ccc--cHhh----cCCC-------------ccc-cch-hhhc-------------------------------cccchhh
Confidence 000 0000 0000 000 000 0000 0112344
Q ss_pred cccceE-EEEeeCCCCCCCChhHHHHHHhhCC----CceEEEeCCCCccccccCc-hhHHHHHhhccccc
Q 013862 172 AVKAQT-LILCSGRDQLLPSEEEGDRLCRALP----NCQTRRFGGGGHFLFLEDG-VDLVTTIKGAGYYR 235 (435)
Q Consensus 172 ~i~~Pv-lii~G~~D~~~~~~~~~~~~~~~~~----~~~~~~i~~~gH~~~~e~p-e~~~~~I~~~~Fl~ 235 (435)
.++.|. |+++|+.|..++.+ +...+.+.+. ..++.++|+.+|.+-.-.. ..+...+.. |++
T Consensus 679 ~~~~~~~LliHGt~DdnVh~q-~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~~~~~--~~~ 745 (755)
T KOG2100|consen 679 NIKTPKLLLIHGTEDDNVHFQ-QSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLYEKLDR--FLR 745 (755)
T ss_pred hhccCCEEEEEcCCcCCcCHH-HHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHHHHHHH--HHH
Confidence 455565 99999999999888 5666665442 2689999999999876443 445555666 554
|
|
| >COG0657 Aes Esterase/lipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0093 Score=54.94 Aligned_cols=61 Identities=23% Similarity=0.276 Sum_probs=42.4
Q ss_pred ChHHHHHHHHHHHHHhhhc-----CCCCCEEEEEeChhHHHHHHHHHhCCC----ceeEEEEecCCcccc
Q 013862 14 HFTGLLKLIERTIRSENCR-----SSNRPVYLVGESLGACLALAVAARNPD----MDLVLILANPATSFR 74 (435)
Q Consensus 14 s~~~~a~dl~~~l~~l~~~-----~~~~~~~lvGhS~Gg~va~~~a~~~p~----~v~~lVli~~~~~~~ 74 (435)
.+....+|+.+.++.+... ...+++.++|+|.||.+++.++..-.+ .....+++.|.....
T Consensus 125 ~~p~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~ 194 (312)
T COG0657 125 PFPAALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLT 194 (312)
T ss_pred CCCchHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCc
Confidence 4555566655555555432 124689999999999999998876543 467888888886543
|
|
| >PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.014 Score=52.80 Aligned_cols=45 Identities=27% Similarity=0.429 Sum_probs=34.5
Q ss_pred cccceEEEEeeCCCCCCCChhHHHHHHh----hC-CCceEEEeCCCCcccc
Q 013862 172 AVKAQTLILCSGRDQLLPSEEEGDRLCR----AL-PNCQTRRFGGGGHFLF 217 (435)
Q Consensus 172 ~i~~Pvlii~G~~D~~~~~~~~~~~~~~----~~-~~~~~~~i~~~gH~~~ 217 (435)
..+.|+++.+|..|.++|.. ..+.+.+ .- .+.+++.+++.+|...
T Consensus 217 ~P~~Pv~i~~g~~D~vvP~~-~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~ 266 (290)
T PF03583_consen 217 TPTVPVLIYQGTADEVVPPA-DTDALVAKWCAAGGADVEYVRYPGGGHLGA 266 (290)
T ss_pred CCCCCEEEEecCCCCCCChH-HHHHHHHHHHHcCCCCEEEEecCCCChhhh
Confidence 34789999999999999998 4555443 33 3567888888999754
|
Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process |
| >PRK10439 enterobactin/ferric enterobactin esterase; Provisional | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0022 Score=60.95 Aligned_cols=56 Identities=13% Similarity=0.118 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHh-hhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCc
Q 013862 16 TGLLKLIERTIRSE-NCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPAT 71 (435)
Q Consensus 16 ~~~a~dl~~~l~~l-~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~ 71 (435)
+.++++|...|++. ......++.+|+|+||||+.|+.++.+||+++.+++.+++..
T Consensus 267 ~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 267 LAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred HHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 33456666666654 222223578899999999999999999999999999999873
|
|
| >PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.013 Score=51.77 Aligned_cols=60 Identities=15% Similarity=0.294 Sum_probs=48.1
Q ss_pred cccceEEEEeeCCCCCCCChhHHHHHHhhCC----CceEEEeCCCCccccc-cCchhHHHHHhhcccc
Q 013862 172 AVKAQTLILCSGRDQLLPSEEEGDRLCRALP----NCQTRRFGGGGHFLFL-EDGVDLVTTIKGAGYY 234 (435)
Q Consensus 172 ~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~----~~~~~~i~~~gH~~~~-e~pe~~~~~I~~~~Fl 234 (435)
...+|-|+++++.|.+++.+ ..++..+... +.+...+++++|..|+ ++|++..+.+.+ |+
T Consensus 176 ~~~~p~lylYS~~D~l~~~~-~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~--fw 240 (240)
T PF05705_consen 176 PSRCPRLYLYSKADPLIPWR-DVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDE--FW 240 (240)
T ss_pred CCCCCeEEecCCCCcCcCHH-HHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHh--hC
Confidence 45689999999999999998 4665554332 3677888999999886 499999999998 64
|
|
| >PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0019 Score=60.73 Aligned_cols=34 Identities=26% Similarity=0.278 Sum_probs=25.6
Q ss_pred CCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCC
Q 013862 36 RPVYLVGESLGACLALAVAARNPDMDLVLILANPA 70 (435)
Q Consensus 36 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~ 70 (435)
.++.++|||+||..++..+.+. .+++..|++|+.
T Consensus 228 ~~i~~~GHSFGGATa~~~l~~d-~r~~~~I~LD~W 261 (379)
T PF03403_consen 228 SRIGLAGHSFGGATALQALRQD-TRFKAGILLDPW 261 (379)
T ss_dssp EEEEEEEETHHHHHHHHHHHH--TT--EEEEES--
T ss_pred hheeeeecCchHHHHHHHHhhc-cCcceEEEeCCc
Confidence 3699999999999999877766 689999999987
|
|
| >PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.014 Score=50.98 Aligned_cols=36 Identities=33% Similarity=0.337 Sum_probs=32.6
Q ss_pred CCEEEEEeChhHHHHHHHHHhC-----CCceeEEEEecCCc
Q 013862 36 RPVYLVGESLGACLALAVAARN-----PDMDLVLILANPAT 71 (435)
Q Consensus 36 ~~~~lvGhS~Gg~va~~~a~~~-----p~~v~~lVli~~~~ 71 (435)
.++.|.|||-||-+|..++..+ +.+++++|+++|..
T Consensus 91 s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 91 SKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred cceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 4799999999999999999888 56899999999985
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >KOG1551 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.017 Score=49.56 Aligned_cols=58 Identities=21% Similarity=0.314 Sum_probs=48.3
Q ss_pred EEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccc-cccCchhHHHHHhhcccccccc
Q 013862 177 TLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFL-FLEDGVDLVTTIKGAGYYRRGR 238 (435)
Q Consensus 177 vlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~-~~e~pe~~~~~I~~~~Fl~~~~ 238 (435)
+.++.+++|.++|.. ....+.+..|++++..++ .||.. ++-+-+.+.+.|.+ -|++..
T Consensus 309 ~ivv~A~~D~Yipr~-gv~~lQ~~WPg~eVr~~e-gGHVsayl~k~dlfRR~I~d--~L~R~~ 367 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRT-GVRSLQEIWPGCEVRYLE-GGHVSAYLFKQDLFRRAIVD--GLDRLD 367 (371)
T ss_pred EEEEEecCCcccccc-CcHHHHHhCCCCEEEEee-cCceeeeehhchHHHHHHHH--HHHhhh
Confidence 567789999999997 789999999999999999 59964 56688889998888 665543
|
|
| >PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3 | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.003 Score=58.11 Aligned_cols=57 Identities=16% Similarity=0.028 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHhhh--cCCCCCEEEEEeChhHHHHHHHHHhCCC--ceeEEEEecCCcc
Q 013862 16 TGLLKLIERTIRSENC--RSSNRPVYLVGESLGACLALAVAARNPD--MDLVLILANPATS 72 (435)
Q Consensus 16 ~~~a~dl~~~l~~l~~--~~~~~~~~lvGhS~Gg~va~~~a~~~p~--~v~~lVli~~~~~ 72 (435)
....+.+..+|+.|.. ..+.++++|||||+||.+|-.++..... ++.+++.+||+.+
T Consensus 128 ~~vg~~la~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP 188 (331)
T PF00151_consen 128 RLVGRQLAKFLSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGP 188 (331)
T ss_dssp HHHHHHHHHHHHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-T
T ss_pred HHHHHHHHHHHHHHHhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccc
Confidence 3445555555655541 1224689999999999999999988877 8999999999964
|
1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A .... |
| >PRK06628 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0054 Score=55.66 Aligned_cols=123 Identities=11% Similarity=0.070 Sum_probs=73.1
Q ss_pred CCcEEeccCCCC--CCCCEEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcchHHHH----HHh
Q 013862 278 DGKIVRGLSGIP--SEGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTF----RIM 351 (435)
Q Consensus 278 ~~~~~~~~~~~p--~~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 351 (435)
..++++|.|++. +++++|+++-|... ++.+...... .+.++..+.++. ++|+ +-.++ ...
T Consensus 98 ~~v~~~g~e~l~~~~gkgvIl~t~H~Gn-wE~~~~~l~~---~~~~~~~vyr~~--~n~~--------~d~~~~~~R~~~ 163 (290)
T PRK06628 98 RRIEIIGIENIKKLEGQPFLLFSGHFAN-WDISLKILHK---FYPKVAVIYRKA--NNPY--------VNKLVNESRAGD 163 (290)
T ss_pred CeEEEeCHHHHHHhcCCcEEEEEecchH-HHHHHHHHHH---hCCCeeEEEecC--CCHH--------HHHHHHHHHHhc
Confidence 457788877654 35789999999854 3654332222 122355555542 1221 33333 333
Q ss_pred CCccc--cH---HHHHHHhcCCCeEEEecCcccc--cccc-CCccceeecCCchhHHHHHHHcCCCEEEEEEecc
Q 013862 352 GSVPV--SA---INFYKLVSSKAHVLLYPGGVRE--AFHR-KGEEYKLFWPESSEFVRVAAAFGGKIVPFGVVGE 418 (435)
Q Consensus 352 g~~~~--~r---~~~~~~l~~g~~~~ifPeG~~~--~~~~-~~~~~~~~~~~~~g~~~~a~~~~~~ivPv~~~g~ 418 (435)
|.-.+ .+ +++.++|++|+.|+|.|.=... ..-+ -|... ..-+|.++||.++|+||||+++.=.
T Consensus 164 g~~~i~~~~~~~r~l~k~Lk~g~~v~il~Dq~~~~gv~v~FFG~~a----~t~~~~a~LA~~~~apvv~~~~~r~ 234 (290)
T PRK06628 164 KLRLIPKGPEGSRALVRAIKESESIVMLVDQKMNDGIEVPFLGHPA----MTASAIAKIALQYKYPIIPCQIIRT 234 (290)
T ss_pred CCceecCCCchHHHHHHHHHcCCeEEEEecccCCCCeeeecCCCcc----ccchHHHHHHHHHCCCEEEEEEEEC
Confidence 43333 22 3788899999999999642211 0001 12222 2568999999999999999998533
|
|
| >KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.03 Score=51.38 Aligned_cols=59 Identities=20% Similarity=0.221 Sum_probs=43.3
Q ss_pred ChHHHHHHHHHHHHH--hhhcCCCCCEEEEEeChhHHHHHHHHHhC------CCceeEEEEecCCcc
Q 013862 14 HFTGLLKLIERTIRS--ENCRSSNRPVYLVGESLGACLALAVAARN------PDMDLVLILANPATS 72 (435)
Q Consensus 14 s~~~~a~dl~~~l~~--l~~~~~~~~~~lvGhS~Gg~va~~~a~~~------p~~v~~lVli~~~~~ 72 (435)
.++|-.+.+.-+.++ +......+++.|+|-|.||.+|..+|.+. +-++++.|++-|...
T Consensus 142 ~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~ 208 (336)
T KOG1515|consen 142 AYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQ 208 (336)
T ss_pred cchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccC
Confidence 466666666666663 33222346799999999999999888653 357999999998854
|
|
| >cd00519 Lipase_3 Lipase (class 3) | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.003 Score=55.30 Aligned_cols=56 Identities=20% Similarity=0.253 Sum_probs=37.9
Q ss_pred hHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhC-----CCceeEEEEecCC
Q 013862 15 FTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARN-----PDMDLVLILANPA 70 (435)
Q Consensus 15 ~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~-----p~~v~~lVli~~~ 70 (435)
+..+.+++...+..+...+++.++++.|||+||.+|..++... +..+..+.+-+|.
T Consensus 107 ~~~~~~~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~ 167 (229)
T cd00519 107 YKSLYNQVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPR 167 (229)
T ss_pred HHHHHHHHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCC
Confidence 4455555666666555556678999999999999999888753 3345555544444
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PRK05646 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0051 Score=56.48 Aligned_cols=123 Identities=14% Similarity=0.099 Sum_probs=71.0
Q ss_pred CCcEEeccCCCC----CCCCEEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcchHHHHHH---
Q 013862 278 DGKIVRGLSGIP----SEGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRI--- 350 (435)
Q Consensus 278 ~~~~~~~~~~~p----~~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 350 (435)
..++++|.|++. +.+++|+++-|... ++........ . .++..+.++. ++| .+..++..
T Consensus 105 ~~~~~~g~e~l~~a~~~gkgvI~~t~H~Gn-WE~~~~~~~~---~-~~~~~vyr~~--~n~--------~~d~~~~~~R~ 169 (310)
T PRK05646 105 RLAHIEGLEHLQQAQQEGQGVILMALHFTT-LEIGAALLGQ---Q-HTIDGMYREH--KNP--------VFDFIQRRGRE 169 (310)
T ss_pred CeEEEeCHHHHHHHHhCCCCEEEEecchhH-HHHHHHHHHc---c-CCCeEEeeCC--CCH--------HHHHHHHHHhh
Confidence 356778877664 35789999999854 3654332221 1 1233343332 122 13344322
Q ss_pred -hC--CccccHH---HHHHHhcCCCeEEEecCccccccccCCc---cceeecCCchhHHHHHHHcCCCEEEEEEec
Q 013862 351 -MG--SVPVSAI---NFYKLVSSKAHVLLYPGGVREAFHRKGE---EYKLFWPESSEFVRVAAAFGGKIVPFGVVG 417 (435)
Q Consensus 351 -~g--~~~~~r~---~~~~~l~~g~~~~ifPeG~~~~~~~~~~---~~~~~~~~~~g~~~~a~~~~~~ivPv~~~g 417 (435)
.| .++..++ .+.++|++|+.|+|-+-=.-. ..+|. ....+-..-+|.++||.++|+||||+++.-
T Consensus 170 ~~g~~~i~~~~~~~r~ilk~Lk~g~~v~il~Dq~~~--~~~gv~v~FfG~~a~t~~g~a~LA~~~~apvvp~~~~r 243 (310)
T PRK05646 170 RHNLDSTAIEREDVRGMLKLLRAGRAIWYAPDQDYG--AKQSIFVPLFGIPAATVTATTKFARLGRARVIPFTQKR 243 (310)
T ss_pred ccCCCcccccHhhHHHHHHHHhCCCeEEEeCCCCCC--CCCCEEecCCCCcchhhhHHHHHHHhhCCcEEEEEEEE
Confidence 23 2434444 678889999999998642211 01111 111111256899999999999999999974
|
|
| >PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides [] | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0043 Score=49.52 Aligned_cols=39 Identities=26% Similarity=0.321 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHh
Q 013862 18 LLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAAR 56 (435)
Q Consensus 18 ~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~ 56 (435)
+.+.+.+.++.+...+++.++++.|||+||.+|..++..
T Consensus 46 ~~~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 46 LYDQILDALKELVEKYPDYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHh
Confidence 334444555554444455689999999999999988765
|
Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A .... |
| >COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0042 Score=53.05 Aligned_cols=63 Identities=11% Similarity=-0.079 Sum_probs=52.9
Q ss_pred CCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCC-----ceeEEEEecCCcc
Q 013862 10 QIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPD-----MDLVLILANPATS 72 (435)
Q Consensus 10 ~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~-----~v~~lVli~~~~~ 72 (435)
+...+..++...+..++..|...+.=.++.+|||||||.-...|+..+.. .++++|.++++..
T Consensus 110 ~n~~s~~~~s~wlk~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 110 DNTASGLDQSKWLKKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred cCcCchhhHHHHHHHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 34567888899999999999887777799999999999999999988743 4889999987743
|
|
| >PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0056 Score=53.46 Aligned_cols=58 Identities=16% Similarity=0.098 Sum_probs=43.9
Q ss_pred ChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHh----CC-----CceeEEEEecCCc
Q 013862 14 HFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAAR----NP-----DMDLVLILANPAT 71 (435)
Q Consensus 14 s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~----~p-----~~v~~lVli~~~~ 71 (435)
+...-..++.++|+.+....+.++++|++||||+.+.+..... .+ .++..+|+++|-.
T Consensus 71 ~a~~s~~~l~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDi 137 (233)
T PF05990_consen 71 SARFSGPALARFLRDLARAPGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDI 137 (233)
T ss_pred hHHHHHHHHHHHHHHHHhccCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCC
Confidence 4555677888888888775566899999999999999887543 22 2577888887764
|
|
| >COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0038 Score=54.28 Aligned_cols=55 Identities=20% Similarity=0.196 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHH-hhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccc
Q 013862 17 GLLKLIERTIRS-ENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSF 73 (435)
Q Consensus 17 ~~a~dl~~~l~~-l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~ 73 (435)
-+.+++.-+|++ ... ..++..++|||+||.+++.....+|+.+...++++|....
T Consensus 119 fL~~~lkP~Ie~~y~~--~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlWw 174 (264)
T COG2819 119 FLTEQLKPFIEARYRT--NSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLWW 174 (264)
T ss_pred HHHHhhHHHHhccccc--CcccceeeeecchhHHHHHHHhcCcchhceeeeecchhhh
Confidence 344455556665 222 2346889999999999999999999999999999998643
|
|
| >PRK08025 lipid A biosynthesis palmitoleoyl acyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0048 Score=56.49 Aligned_cols=122 Identities=14% Similarity=0.049 Sum_probs=70.2
Q ss_pred CCcEEeccCCCC----CCCCEEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcchHHHHH----
Q 013862 278 DGKIVRGLSGIP----SEGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFR---- 349 (435)
Q Consensus 278 ~~~~~~~~~~~p----~~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 349 (435)
..++++|.|++. +++++|+++-|... ++........ . .++..+.++.- +| .+..++.
T Consensus 106 ~~v~~~g~e~l~~a~~~gkgvI~lt~H~Gn-wE~~~~~l~~--~--~~~~~vyr~~~--n~--------~~d~~~~~~R~ 170 (305)
T PRK08025 106 KWFDVEGLDNLKRAQMQNRGVMVVGVHFMS-LELGGRVMGL--C--QPMMATYRPHN--NK--------LMEWVQTRGRM 170 (305)
T ss_pred CeEEEECHHHHHHHHhCCCCEEEEecchhH-HHHHHHHHHc--c--CCCeEEEeCCC--CH--------HHHHHHHHHHh
Confidence 356788887764 36789999999854 3654433221 1 22444444321 12 1444432
Q ss_pred HhCCccccHH---HHHHHhcCCCeEEEecCccccccccCCccce---ee-cCCchhHHHHHHHcCCCEEEEEEe
Q 013862 350 IMGSVPVSAI---NFYKLVSSKAHVLLYPGGVREAFHRKGEEYK---LF-WPESSEFVRVAAAFGGKIVPFGVV 416 (435)
Q Consensus 350 ~~g~~~~~r~---~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~---~~-~~~~~g~~~~a~~~~~~ivPv~~~ 416 (435)
..|...++++ .+.++|++|+.++|-|-=.-. ..+|...+ .. -..-+|.++||.++|+||||+++.
T Consensus 171 ~~g~~~i~~~~~r~~~~aLk~g~~v~il~DQ~~~--~~~gv~v~FfG~~~a~t~~g~~~LA~~~~apvvp~~~~ 242 (305)
T PRK08025 171 RSNKAMIGRNNLRGIVGALKKGEAVWFAPDQDYG--PKGSSFAPFFAVENVATTNGTYVLSRLSGAAMLTVTMV 242 (305)
T ss_pred ccCCcCcCcccHHHHHHHHhCCCeEEEeCCCCCC--CCCCeEeCCCCCcchhHHHHHHHHHHhhCCeEEEEEEE
Confidence 2343333333 688899999999999642211 01111111 00 114678899999999999999994
|
|
| >KOG2112 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.028 Score=46.81 Aligned_cols=60 Identities=18% Similarity=0.073 Sum_probs=44.6
Q ss_pred CCCChHHHHHHHHHHHHHhhhcC-CCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCC
Q 013862 11 IGHHFTGLLKLIERTIRSENCRS-SNRPVYLVGESLGACLALAVAARNPDMDLVLILANPA 70 (435)
Q Consensus 11 ~~~s~~~~a~dl~~~l~~l~~~~-~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~ 70 (435)
+..++...++.+..++++.-... +..++.+-|.|+||.+++..+..+|..+.+++-..+.
T Consensus 67 d~~~~~~aa~~i~~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~ 127 (206)
T KOG2112|consen 67 DEEGLHRAADNIANLIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGF 127 (206)
T ss_pred hhhHHHHHHHHHHHHHHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccc
Confidence 44567777888888888764431 2346889999999999999999998777766654433
|
|
| >KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.0044 Score=51.91 Aligned_cols=57 Identities=18% Similarity=0.339 Sum_probs=47.6
Q ss_pred cccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhh
Q 013862 170 LDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKG 230 (435)
Q Consensus 170 l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~ 230 (435)
...+++|.|-|.|+.|.+++.. .++.+++.++++.+..-+ +||.++..+ ...+.|.+
T Consensus 159 ~~~i~~PSLHi~G~~D~iv~~~-~s~~L~~~~~~a~vl~Hp-ggH~VP~~~--~~~~~i~~ 215 (230)
T KOG2551|consen 159 KRPLSTPSLHIFGETDTIVPSE-RSEQLAESFKDATVLEHP-GGHIVPNKA--KYKEKIAD 215 (230)
T ss_pred ccCCCCCeeEEecccceeecch-HHHHHHHhcCCCeEEecC-CCccCCCch--HHHHHHHH
Confidence 3468999999999999999999 799999999999777777 599998665 45556666
|
|
| >PRK08706 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.0079 Score=54.63 Aligned_cols=123 Identities=14% Similarity=0.049 Sum_probs=67.4
Q ss_pred CcEEeccCCCC----CCCCEEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcchHHHHH----H
Q 013862 279 GKIVRGLSGIP----SEGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFR----I 350 (435)
Q Consensus 279 ~~~~~~~~~~p----~~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 350 (435)
.++++|.|++. +.+++|+++-|... ++......... .+...+.++.- + +.+-.++. .
T Consensus 89 ~~~~~~~e~l~~~~~~gkgvI~~t~H~Gn-WEl~~~~~~~~----~~~~~i~r~~~--n--------~~~d~~~~~~R~~ 153 (289)
T PRK08706 89 LVRYRNKHYLDDALAAGEKVIILYPHFTA-FEMAVYALNQD----VPLISMYSHQK--N--------KILDEQILKGRNR 153 (289)
T ss_pred ceEEECHHHHHHHHhCCCCEEEEecchhH-HHHHHHHHHcc----CCCcEEeeCCC--C--------HHHHHHHHHHHhc
Confidence 46788877664 36799999999854 36543322221 12333333221 1 11333332 2
Q ss_pred hCC--ccccHH---HHHHHh-cCCCeEEEecCccccccccCCc---cceeecCCchhHHHHHHHcCCCEEEEEEecc
Q 013862 351 MGS--VPVSAI---NFYKLV-SSKAHVLLYPGGVREAFHRKGE---EYKLFWPESSEFVRVAAAFGGKIVPFGVVGE 418 (435)
Q Consensus 351 ~g~--~~~~r~---~~~~~l-~~g~~~~ifPeG~~~~~~~~~~---~~~~~~~~~~g~~~~a~~~~~~ivPv~~~g~ 418 (435)
.|. ++-.++ ++.++| ++|..+++.+.=.-. ..+|. .....-.+-+|.++||.++|+||||+++.=.
T Consensus 154 ~g~~~i~~~~~~~r~i~k~L~k~~~~v~~l~Dq~~~--~~~gv~v~FfG~~a~t~~g~a~LA~~~~apvvp~~~~R~ 228 (289)
T PRK08706 154 YHNVFLIGRTEGLRALVKQFRKSSAPFLYLPDQDFG--RNDSVFVDFFGIQTATITGLSRIAALANAKVIPAIPVRE 228 (289)
T ss_pred cCCcccccChhhHHHHHHHHHhCCceEEEeCCCCCC--CCCCEEeccCCccchhhhHHHHHHHhcCCeEEEEEEEEc
Confidence 333 221222 788888 577777776422110 01111 1111112568999999999999999999743
|
|
| >PRK06946 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.0068 Score=55.13 Aligned_cols=124 Identities=18% Similarity=0.144 Sum_probs=71.7
Q ss_pred CCcEEeccCCCCC--CCCEEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcchHHHH----HHh
Q 013862 278 DGKIVRGLSGIPS--EGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTF----RIM 351 (435)
Q Consensus 278 ~~~~~~~~~~~p~--~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 351 (435)
..++++|.|++.. .+++|+++-|... ++.......... +.++..+.++. ++| .+-.++ ...
T Consensus 93 ~~~~~~g~~~~~~~~gkgvI~~t~H~Gn-WEl~~~~~~~~~--~~~~~~vyr~~--~n~--------~~d~~~~~~R~~~ 159 (293)
T PRK06946 93 KLVQVDSAIDLTDPDGPPTIFLGLHFVG-IEAGSIWLNYSL--RRRVGSLYTPM--SNP--------LLDAIAKAARGRF 159 (293)
T ss_pred ceEEEECHHHHHhcCCCCEEEEecchhH-HHHHHHHHHhcc--cCCceEEeeCC--CCH--------HHHHHHHHHHHhc
Confidence 3567778776653 6789999999854 366443322111 12355555442 222 133333 233
Q ss_pred CCccccHH----HHHHHhcCCCeEEEecCccccccccCCccce---eecCCchhHHHHHHHcCCCEEEEEEe
Q 013862 352 GSVPVSAI----NFYKLVSSKAHVLLYPGGVREAFHRKGEEYK---LFWPESSEFVRVAAAFGGKIVPFGVV 416 (435)
Q Consensus 352 g~~~~~r~----~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~---~~~~~~~g~~~~a~~~~~~ivPv~~~ 416 (435)
|..-+.++ .+.++|++|+.+++-|.=..+ ..+|...+ .+-..-+|.++||.++|+||||+++.
T Consensus 160 g~~~i~~~~~~r~~~~~Lk~g~~v~~l~Dq~~~--~~~gv~v~FFG~~a~t~~~~a~LA~~~~a~vvp~~~~ 229 (293)
T PRK06946 160 GAEMVSRADSARQVLRWLRDGKPVMLGADMDFG--LRDSTFVPFFGVPACTLTAVSRLARTGGAQVVPFITE 229 (293)
T ss_pred CCCccCCCchHHHHHHHHhCCCeEEEeCCCCCC--CCCCeEeCCCCCCcHHhHHHHHHHHhcCCeEEEEEEE
Confidence 44333332 788889999999999653211 01111111 11114588999999999999999886
|
|
| >PRK08733 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.0078 Score=55.10 Aligned_cols=122 Identities=15% Similarity=0.079 Sum_probs=69.8
Q ss_pred CCcEEeccCCCC----CCCCEEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcchHHHHHH---
Q 013862 278 DGKIVRGLSGIP----SEGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRI--- 350 (435)
Q Consensus 278 ~~~~~~~~~~~p----~~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 350 (435)
..++++|.|++. +.+++|+++-|... ++.+....... .++..+.++. ++| .+-.++..
T Consensus 108 ~~v~v~g~e~l~~a~~~gkgvI~~t~H~Gn-WE~~~~~~~~~----~~~~~vyr~~--~n~--------~~d~~i~~~R~ 172 (306)
T PRK08733 108 PGVQIEGLEHLQQLQQQGRGVLLVSGHFMT-LEMCGRLLCDH----VPLAGMYRRH--RNP--------VFEWAVKRGRL 172 (306)
T ss_pred CcEEEeCHHHHHHHHhCCCCEEEEecCchH-HHHHHHHHHcc----CCceEEEeCC--CCH--------HHHHHHHHHHh
Confidence 356788887664 35789999999854 36543332211 1233443332 111 13333332
Q ss_pred -hCCccccH---HHHHHHhcCCCeEEEecCccccccccCCcc---ceeecCCchhHHHHHHHcCCCEEEEEEe
Q 013862 351 -MGSVPVSA---INFYKLVSSKAHVLLYPGGVREAFHRKGEE---YKLFWPESSEFVRVAAAFGGKIVPFGVV 416 (435)
Q Consensus 351 -~g~~~~~r---~~~~~~l~~g~~~~ifPeG~~~~~~~~~~~---~~~~~~~~~g~~~~a~~~~~~ivPv~~~ 416 (435)
.|.--+.+ +.+.++|++|+.|+|-+-=.-. ..+|.. ....-..-+|.++||.++|+||||+++.
T Consensus 173 ~~g~~~i~~~~~r~~~kaLk~g~~v~il~Dq~~~--~~~gv~v~FfG~~a~t~~g~a~LA~~~~apvvp~~~~ 243 (306)
T PRK08733 173 RYATHMFANEDLRATIKHLKRGGFLWYAPDQDMR--GKDTVFVPFFGHPASTITATHQLARLTGCAVVPYFHR 243 (306)
T ss_pred hcCCcCcCcccHHHHHHHHhCCCeEEEeCCCCCC--CCCcEEeCCCCCchhHHHHHHHHHHHhCCeEEEEEEE
Confidence 23222223 3788899999999999642211 011111 1111124589999999999999999995
|
|
| >PRK08943 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; Validated | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.0081 Score=55.22 Aligned_cols=123 Identities=14% Similarity=0.065 Sum_probs=70.5
Q ss_pred CCcEEeccCCCC----CCCCEEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcchHHHHHH---
Q 013862 278 DGKIVRGLSGIP----SEGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRI--- 350 (435)
Q Consensus 278 ~~~~~~~~~~~p----~~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 350 (435)
..++++|.|++. .++++|+++-|... ++.+..... ..+.++..+.++. ++|+ +-.++..
T Consensus 113 ~~~~~~g~e~l~~a~~~gkgvI~~t~H~gn-wE~~~~~~~---~~~~~~~~vyr~~--~n~~--------~d~~~~~~R~ 178 (314)
T PRK08943 113 RRVEWHGLEILEEARANGENVIFLVPHGWA-IDIPAMLLA---SQGQPMAAMFHNQ--RNPL--------FDWLWNRVRR 178 (314)
T ss_pred CeEEEECHHHHHHHHhCCCCEEEEEechhH-HHHHHHHHH---hcCCCccEEEeCC--CCHH--------HHHHHHHHHh
Confidence 356788887764 36789999999632 344322222 2233355555543 2221 4344322
Q ss_pred -hCCccccH----HHHHHHhcCCCeEEEecCccccccccCCccce---eecCCchhHHHHHHHcCCCEEEEEEe
Q 013862 351 -MGSVPVSA----INFYKLVSSKAHVLLYPGGVREAFHRKGEEYK---LFWPESSEFVRVAAAFGGKIVPFGVV 416 (435)
Q Consensus 351 -~g~~~~~r----~~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~---~~~~~~~g~~~~a~~~~~~ivPv~~~ 416 (435)
.|.--+.+ ..+.++|++|+.|+|-+.-..+ ..+|...+ .....-+|.++||.++|+||||+++.
T Consensus 179 ~~g~~~i~~~~~~r~i~kaLk~g~~v~il~Dq~~~--~~~gv~v~FfG~~a~t~~g~a~LA~k~~apvvp~~~~ 250 (314)
T PRK08943 179 RFGGRLHAREDGIKPFISSVRQGYWGYYLPDEDHG--PEHSVFVDFFATYKATLPGIGRLAKVCRARVVPLFPV 250 (314)
T ss_pred hcCCeeecCchhHHHHHHHHhCCCeEEEeCCCCCC--CCCCEEeCCCCCchhHhHHHHHHHHHhCCeEEEEEEE
Confidence 33322222 2788899999999999653321 01111111 11113478999999999999999994
|
|
| >PRK06860 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.0078 Score=55.23 Aligned_cols=123 Identities=18% Similarity=0.069 Sum_probs=71.1
Q ss_pred CCcEEeccCCCC----CCCCEEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcchHHHHH----
Q 013862 278 DGKIVRGLSGIP----SEGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFR---- 349 (435)
Q Consensus 278 ~~~~~~~~~~~p----~~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 349 (435)
..++++|.|++. +.+++|+++-|... ++.+...... .. ++..+.++. ++| .+..++.
T Consensus 108 ~~v~i~g~e~l~~a~~~gkgvI~lt~H~Gn-wE~~~~~~~~---~~-~~~~vyr~~--~n~--------~~d~~~~~~R~ 172 (309)
T PRK06860 108 RWTEVEGLEHIREVQAQGRGVLLVGVHFLT-LELGARIFGM---HN-PGIGVYRPN--DNP--------LYDWLQTWGRL 172 (309)
T ss_pred CeEEEeCHHHHHHHHhCCCCEEEEecchhH-HHHHHHHHHc---cC-CCeEEeeCC--CCH--------HHHHHHHHHHh
Confidence 356788887764 36789999999854 3654333221 11 244444432 122 1333332
Q ss_pred HhCCccccHH---HHHHHhcCCCeEEEecCccccccccCCccce---ee-cCCchhHHHHHHHcCCCEEEEEEec
Q 013862 350 IMGSVPVSAI---NFYKLVSSKAHVLLYPGGVREAFHRKGEEYK---LF-WPESSEFVRVAAAFGGKIVPFGVVG 417 (435)
Q Consensus 350 ~~g~~~~~r~---~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~---~~-~~~~~g~~~~a~~~~~~ivPv~~~g 417 (435)
..|..-+.++ ++.++|++|+.|+|-+--.-. ..+|...+ .. -..-+|.++||.++|+||||+++.=
T Consensus 173 ~~g~~~i~~~~~r~~~k~Lk~g~~v~il~Dq~~~--~~~gv~v~FfG~~~a~t~~g~a~LA~~~~apvvp~~~~R 245 (309)
T PRK06860 173 RSNKSMLDRKDLKGMIKALKKGERIWYAPDHDYG--PRSSVFVPFFAVEQAATTTGTWMLARMSKAAVIPFVPRR 245 (309)
T ss_pred hcCCcCcCcccHHHHHHHHhcCCeEEEeCCCCCC--CCCCEEecCCCCCchhhHHHHHHHHHHhCCeEEEEEEEE
Confidence 2343333333 688899999999998643211 01111111 00 1246789999999999999999963
|
|
| >PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.011 Score=57.34 Aligned_cols=60 Identities=18% Similarity=0.110 Sum_probs=47.1
Q ss_pred CChHHHHHHHHHHHHHhhhcC---CCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcc
Q 013862 13 HHFTGLLKLIERTIRSENCRS---SNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATS 72 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~~---~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~ 72 (435)
.|.++..+|+..+++++.... ++.|++++|-|+||.+|..+-.+||+.|.+.+..+++..
T Consensus 87 Lt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 87 LTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp -SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred cCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 589999999999999998543 345899999999999999999999999999998887753
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C. |
| >COG4188 Predicted dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.0048 Score=56.15 Aligned_cols=58 Identities=28% Similarity=0.291 Sum_probs=48.2
Q ss_pred hhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCc--eEEEeCCCCccccccCchhH
Q 013862 167 NARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNC--QTRRFGGGGHFLFLEDGVDL 224 (435)
Q Consensus 167 ~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~--~~~~i~~~gH~~~~e~pe~~ 224 (435)
...+.+++.|++++.|..|.+.|....+......+++. -+..++++.|+-++|-.++.
T Consensus 244 ~tgl~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~~~~~~ 303 (365)
T COG4188 244 TTGLVKVTDPVLLAAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFSFLELCKEG 303 (365)
T ss_pred cccceeeecceeeecccccccCCcccccccccccCCcchhheeecCCCccccccccCccc
Confidence 46688899999999999999888875566667778877 67889999999999877664
|
|
| >PRK08734 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.008 Score=54.98 Aligned_cols=120 Identities=13% Similarity=0.043 Sum_probs=71.2
Q ss_pred cEEeccCCCC----CCCCEEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcchHHHHHH----h
Q 013862 280 KIVRGLSGIP----SEGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRI----M 351 (435)
Q Consensus 280 ~~~~~~~~~p----~~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 351 (435)
++++|.|++. +.+++|+++-|... ++........ . .++..+.++. ++| .+-.++.. .
T Consensus 97 ~~~~g~e~l~~~~~~gkgvI~lt~H~Gn-wE~~~~~~~~--~--~~~~~vyr~~--~n~--------~~d~~~~~~R~~~ 161 (305)
T PRK08734 97 RQRHGQELYDAALASGRGVIVAAPHFGN-WELLNQWLSE--R--GPIAIVYRPP--ESE--------AVDGFLQLVRGGD 161 (305)
T ss_pred EEecCHHHHHHHHHcCCCEEEEccccch-HHHHHHHHHc--c--CCceEEEeCC--CCH--------HHHHHHHHHhccC
Confidence 4678887764 35689999999854 3654333221 1 2344454432 122 24444432 3
Q ss_pred CCccc--cH---HHHHHHhcCCCeEEEecCccccccccCCc---cceeecCCchhHHHHHHHcCCCEEEEEEe
Q 013862 352 GSVPV--SA---INFYKLVSSKAHVLLYPGGVREAFHRKGE---EYKLFWPESSEFVRVAAAFGGKIVPFGVV 416 (435)
Q Consensus 352 g~~~~--~r---~~~~~~l~~g~~~~ifPeG~~~~~~~~~~---~~~~~~~~~~g~~~~a~~~~~~ivPv~~~ 416 (435)
|...+ ++ ..+.++|++|+.|++-+.=.-. ..+|. .....-..-+|.++||.++|+||||+++.
T Consensus 162 g~~~i~~~~~~~r~li~~Lk~g~~v~~l~Dq~~~--~~~gv~v~FfG~~a~t~~g~a~LA~~~~apVvp~~~~ 232 (305)
T PRK08734 162 NVRQVRAEGPAVRQLFKVLKDGGAVGILPDQQPK--MGDGVFAPFFGIPALTMTLVNRLAERTGATVLYGWCE 232 (305)
T ss_pred CCeeecCCchhHHHHHHHHhcCCeEEEeCCCCCC--CCCCeEeccCCCccchhhHHHHHHHHhCCeEEEEEEE
Confidence 43333 22 3788999999999998643211 01111 11111225689999999999999999996
|
|
| >TIGR02207 lipid_A_htrB lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.015 Score=53.21 Aligned_cols=123 Identities=15% Similarity=0.072 Sum_probs=70.5
Q ss_pred CCcEEeccCCCC----CCCCEEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcchHHHH----H
Q 013862 278 DGKIVRGLSGIP----SEGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTF----R 349 (435)
Q Consensus 278 ~~~~~~~~~~~p----~~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 349 (435)
..++++|.|++. +.+++|+++-|... ++.+...... . .++..+.++. ++| .+..++ .
T Consensus 102 ~~v~i~g~e~l~~a~~~gkgvI~lt~H~Gn-wE~~~~~~~~--~--~~~~~vyr~~--~n~--------~~d~l~~~~R~ 166 (303)
T TIGR02207 102 KWMQIEGLEHLQRAQKQGRGVLLVGVHFLT-LELGARIFGQ--Q--QPGIGVYRPH--NNP--------LFDWIQTRGRL 166 (303)
T ss_pred CcEEEECHHHHHHHHhcCCCEEEEecchhH-HHHHHHHHHc--c--CCCeEEEeCC--CCH--------HHHHHHHHHHH
Confidence 356788887764 36789999999854 3554333221 1 1233343321 122 133333 2
Q ss_pred HhCCccccHH---HHHHHhcCCCeEEEecCccccccccCCc---cceee-cCCchhHHHHHHHcCCCEEEEEEec
Q 013862 350 IMGSVPVSAI---NFYKLVSSKAHVLLYPGGVREAFHRKGE---EYKLF-WPESSEFVRVAAAFGGKIVPFGVVG 417 (435)
Q Consensus 350 ~~g~~~~~r~---~~~~~l~~g~~~~ifPeG~~~~~~~~~~---~~~~~-~~~~~g~~~~a~~~~~~ivPv~~~g 417 (435)
..|.--+.++ .+.++|++|+.|+|-+.-.-. ..+|. ..... -.+-+|.++||.++|+||||+++.=
T Consensus 167 ~~g~~~i~~~~~r~i~~~Lk~g~~v~il~Dq~~~--~~~g~~v~FfG~~~a~~~~g~a~LA~~~~apvip~~~~r 239 (303)
T TIGR02207 167 RSNKAMIDRKDLRGMIKALKNGERIWYAPDHDYG--RKSSVFVPFFAVPDAATTTGTSILARLSKCAVVPFTPRR 239 (303)
T ss_pred hcCCcccCcccHHHHHHHHhCCCeEEEeCCCCCC--CCCcEEeCCCCCCcchhHHHHHHHHHHhCCeEEEEEEEE
Confidence 2233223333 688899999999998752211 01111 11111 1255799999999999999999963
|
This model represents a narrow clade of acyltransferases, nearly all of which transfer a lauroyl group to KDO2-lipid IV-A, a lipid A precursor; these proteins are termed lipid A biosynthesis lauroyl acyltransferase, HtrB. An exception is a closely related paralog of E. coli HtrB, LpxP, which acts in cold shock conditions by transferring a palmitoleoyl rather than lauroyl group to the lipid A precursor. Members of this family are homologous to the family of acyltransferases responsible for the next step in lipid A biosynthesis. |
| >COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.0097 Score=55.16 Aligned_cols=60 Identities=8% Similarity=-0.000 Sum_probs=44.8
Q ss_pred CCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCC--CceeEEEEecCCc
Q 013862 12 GHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNP--DMDLVLILANPAT 71 (435)
Q Consensus 12 ~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p--~~v~~lVli~~~~ 71 (435)
.++....++.+...++..-...+-+++.|+||||||..+..++..++ .+|++++.++++-
T Consensus 103 ~~~~~~~~~ql~~~V~~~l~~~ga~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~ 164 (336)
T COG1075 103 TYSLAVRGEQLFAYVDEVLAKTGAKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPH 164 (336)
T ss_pred CccccccHHHHHHHHHHHHhhcCCCceEEEeecccchhhHHHHhhcCccceEEEEEEeccCC
Confidence 34444555555555555444333479999999999999999999988 8999999998774
|
|
| >PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids [] | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.0058 Score=50.92 Aligned_cols=60 Identities=18% Similarity=0.149 Sum_probs=48.0
Q ss_pred CChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHh--C----CCceeEEEEecCCcc
Q 013862 13 HHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAAR--N----PDMDLVLILANPATS 72 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~--~----p~~v~~lVli~~~~~ 72 (435)
.|..+=++++...++......|+.+++|+|+|.|+.++..++.. . .++|.++|+++-+..
T Consensus 58 ~S~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~ 123 (179)
T PF01083_consen 58 DSVAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRR 123 (179)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTT
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCcc
Confidence 35666677888888887777888899999999999999999877 2 357999999876643
|
Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A .... |
| >PRK08905 lipid A biosynthesis lauroyl acyltransferase; Validated | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.0078 Score=54.61 Aligned_cols=120 Identities=14% Similarity=0.074 Sum_probs=69.2
Q ss_pred cEEeccCCCC----CCCCEEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcchHHHHHH----h
Q 013862 280 KIVRGLSGIP----SEGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRI----M 351 (435)
Q Consensus 280 ~~~~~~~~~p----~~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 351 (435)
.+++|.|++. ..+++|+++-|... ++........ . .++..++++. ++| .+..++.. .
T Consensus 85 ~~~~g~e~l~~a~~~gkgvIllt~H~Gn-wE~~~~~~~~--~--~~~~~v~r~~--~n~--------~~~~~~~~~R~~~ 149 (289)
T PRK08905 85 KDDHGWEHVEAALAEGRGILFLTPHLGC-FEVTARYIAQ--R--FPLTAMFRPP--RKA--------ALRPLMEAGRARG 149 (289)
T ss_pred eeecCHHHHHHHHhcCCCEEEEecccch-HHHHHHHHHh--c--CCceEEEECC--CCH--------HHHHHHHHHhccc
Confidence 4566766543 36789999999854 3554322221 1 2356665543 222 14333322 2
Q ss_pred CC--ccccHH---HHHHHhcCCCeEEEecCccccccccCCc---cceeecCCchhHHHHHHHcCCCEEEEEEe
Q 013862 352 GS--VPVSAI---NFYKLVSSKAHVLLYPGGVREAFHRKGE---EYKLFWPESSEFVRVAAAFGGKIVPFGVV 416 (435)
Q Consensus 352 g~--~~~~r~---~~~~~l~~g~~~~ifPeG~~~~~~~~~~---~~~~~~~~~~g~~~~a~~~~~~ivPv~~~ 416 (435)
|. ++.++. .+.++|++|+.|++-+--.-+ ...|. .......+-+|.++||.++++||||+++.
T Consensus 150 g~~~i~~~~~~~~~i~~aLk~g~~v~il~Dq~~~--~~~g~~v~FfG~~a~~~~gpa~lA~~~~apvvp~~~~ 220 (289)
T PRK08905 150 NMRTAPATPQGVRMLVKALRRGEAVGILPDQVPS--GGEGVWAPFFGRPAYTMTLVARLAEVTGVPVIFVAGE 220 (289)
T ss_pred CCceeccCCccHHHHHHHHhcCCeEEEcCCCCCC--CCCceEecCCCCcchHHHHHHHHHHhhCCcEEEEEEE
Confidence 32 322222 788999999999998542211 01111 11111225689999999999999999996
|
|
| >PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids [] | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.012 Score=50.55 Aligned_cols=40 Identities=20% Similarity=0.175 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhC
Q 013862 17 GLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARN 57 (435)
Q Consensus 17 ~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~ 57 (435)
+.+.++.++++......+. ++.||||||||.++..+..-.
T Consensus 57 ~~~~~l~~fI~~Vl~~TGa-kVDIVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 57 ESAKQLRAFIDAVLAYTGA-KVDIVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp HHHHHHHHHHHHHHHHHT---EEEEEETCHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHHHhhCC-EEEEEEcCCcCHHHHHHHHHc
Confidence 4456777787777655555 999999999999998887543
|
This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A .... |
| >KOG3730 consensus Acyl-CoA:dihydroxyactetone-phosphate acyltransferase DHAPAT [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.015 Score=53.82 Aligned_cols=110 Identities=21% Similarity=0.216 Sum_probs=79.3
Q ss_pred CCCEEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcchHHHHHHhCCccccHH-----------
Q 013862 291 EGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRIMGSVPVSAI----------- 359 (435)
Q Consensus 291 ~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~----------- 359 (435)
+-|+|+...|.|+ +|++++...+. ..++++-.+|...=|.. + .+++..++..|+...-|.
T Consensus 149 k~pV~~lPSHrsY-~DFlllS~icy-~YDi~iP~IAAGmDF~s-----M--k~mg~~LR~sGAFFMRRsFg~d~LYWaVF 219 (685)
T KOG3730|consen 149 KCPVLYLPSHRSY-MDFLLLSYICY-YYDIEIPGIAAGMDFHS-----M--KGMGTMLRKSGAFFMRRSFGNDELYWAVF 219 (685)
T ss_pred cCCEEEeccchhH-HHHHHHHHHHH-hccCCCchhhcccchHh-----h--hHHHHHHHhcccceeeeccCCceehHHHH
Confidence 5699999999998 67766655433 23444666666544432 1 238889999999888775
Q ss_pred --HHHHHhcCCC-eEEEecCccccccccCCccceeecCCchhHHHHHHHc-------CCCEEEEEEe
Q 013862 360 --NFYKLVSSKA-HVLLYPGGVREAFHRKGEEYKLFWPESSEFVRVAAAF-------GGKIVPFGVV 416 (435)
Q Consensus 360 --~~~~~l~~g~-~~~ifPeG~~~~~~~~~~~~~~~~~~~~g~~~~a~~~-------~~~ivPv~~~ 416 (435)
-+...++++. .|=.|-||||+ +.++... -|-|...++.+- ++-||||.+.
T Consensus 220 sEYv~t~v~N~~~~VEFFiEgTRS---R~~K~L~----PK~GlL~mvlePyf~geV~Dv~iVPVSv~ 279 (685)
T KOG3730|consen 220 SEYVYTLVANYHIGVEFFIEGTRS---RNFKALV----PKIGLLSMVLEPYFTGEVPDVMIVPVSVA 279 (685)
T ss_pred HHHHHHHHhcCCCceEEEEeeccc---ccccccC----cchhhHHHHHhhhhcCCcCceEEEEeeec
Confidence 4566677775 78899999999 7666544 688998888864 5669999984
|
|
| >smart00824 PKS_TE Thioesterase | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.019 Score=49.05 Aligned_cols=56 Identities=29% Similarity=0.318 Sum_probs=41.8
Q ss_pred CChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHh---CCCceeEEEEecCCc
Q 013862 13 HHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAAR---NPDMDLVLILANPAT 71 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~---~p~~v~~lVli~~~~ 71 (435)
.++++++++....+.... +..+++++|||+||.++...+.+ .++.+.+++++++..
T Consensus 44 ~~~~~~~~~~~~~l~~~~---~~~~~~l~g~s~Gg~~a~~~a~~l~~~~~~~~~l~~~~~~~ 102 (212)
T smart00824 44 ASADALVEAQAEAVLRAA---GGRPFVLVGHSSGGLLAHAVAARLEARGIPPAAVVLLDTYP 102 (212)
T ss_pred CCHHHHHHHHHHHHHHhc---CCCCeEEEEECHHHHHHHHHHHHHHhCCCCCcEEEEEccCC
Confidence 467777776665554332 24689999999999999988876 456799999888654
|
Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa. |
| >TIGR02208 lipid_A_msbB lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.011 Score=54.11 Aligned_cols=122 Identities=11% Similarity=0.045 Sum_probs=69.3
Q ss_pred CcEEeccCCCC----CCCCEEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcchHHHHHH----
Q 013862 279 GKIVRGLSGIP----SEGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRI---- 350 (435)
Q Consensus 279 ~~~~~~~~~~p----~~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 350 (435)
.++++|.|++. +.+++|+++-|... ++........ .+.++..+.++.- +| .+-.++..
T Consensus 105 ~~~i~g~e~l~~~~~~gkgvi~~t~H~gn-wE~~~~~~~~---~~~~~~~v~r~~~--n~--------~~d~~~~~~R~~ 170 (305)
T TIGR02208 105 RVNLMGLEHIEAAQAAGKPVIFLVPHGWA-IDYAGLRLAS---QGLPMVTMFNNHK--NP--------LFDWLWNRVRSR 170 (305)
T ss_pred ceEEeCHHHHHHHHhCCCCEEEEecchhH-HHHHHHHHHh---cCCCceEEeeCCC--CH--------HHHHHHHHHHhc
Confidence 46788877764 36799999999632 4543332221 2233444444321 11 14344332
Q ss_pred hCCcccc-H---HHHHHHhcCCCeEEEecCccccccccCCccce---eecCCchhHHHHHHHcCCCEEEEEEe
Q 013862 351 MGSVPVS-A---INFYKLVSSKAHVLLYPGGVREAFHRKGEEYK---LFWPESSEFVRVAAAFGGKIVPFGVV 416 (435)
Q Consensus 351 ~g~~~~~-r---~~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~---~~~~~~~g~~~~a~~~~~~ivPv~~~ 416 (435)
.|.--+. + +.+.++|++|+.|+|-+-=.-+ ..+|...+ ..-..-+|.++||.++|+||||+++.
T Consensus 171 ~g~~~i~~~~~~r~i~~aLk~g~~v~il~Dq~~~--~~~gv~v~FfG~~a~t~~~~a~LA~~~~apvv~~~~~ 241 (305)
T TIGR02208 171 FGGHVYAREAGIKALLASLKRGESGYYLPDEDHG--PEQSVFVPFFATYKATLPVVGRLAKAGNAQVVPVFPG 241 (305)
T ss_pred CCCceecChhhHHHHHHHHhCCCeEEEeCCCCCC--CCCCeEeccCCCcchhHHHHHHHHHhcCCeEEEEEEE
Confidence 2322232 2 2788899999999998643211 01121111 00113478899999999999999985
|
This family consists of MsbB in E. coli and closely related proteins in other species. MsbB is homologous to HtrB (TIGR02207) and acts immediately after it in the biosynthesis of KDO-2 lipid A (also called Re LPS and Re endotoxin). These two enzymes act after creation of KDO-2 lipid IV-A by addition of the KDO sugars. |
| >PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.013 Score=50.70 Aligned_cols=36 Identities=25% Similarity=0.198 Sum_probs=30.3
Q ss_pred CCEEEEEeChhHHHHHHHHHhC----CCceeEEEEecCCc
Q 013862 36 RPVYLVGESLGACLALAVAARN----PDMDLVLILANPAT 71 (435)
Q Consensus 36 ~~~~lvGhS~Gg~va~~~a~~~----p~~v~~lVli~~~~ 71 (435)
+++.+.|||.||.+|...|... .++|.+++..++++
T Consensus 84 ~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 84 GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPG 123 (224)
T ss_pred CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCC
Confidence 3699999999999999988874 35788999888774
|
|
| >PLN02454 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.021 Score=53.29 Aligned_cols=40 Identities=28% Similarity=0.252 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHhhhcCCCCC--EEEEEeChhHHHHHHHHHh
Q 013862 17 GLLKLIERTIRSENCRSSNRP--VYLVGESLGACLALAVAAR 56 (435)
Q Consensus 17 ~~a~dl~~~l~~l~~~~~~~~--~~lvGhS~Gg~va~~~a~~ 56 (435)
...+++.+.++.+...+++.+ +++.|||+||.+|+..|..
T Consensus 207 S~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 207 SARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 456666666666665555555 9999999999999998854
|
|
| >KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.0089 Score=55.94 Aligned_cols=57 Identities=12% Similarity=0.108 Sum_probs=45.9
Q ss_pred ChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCC--------ceeEEEEecCC
Q 013862 14 HFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPD--------MDLVLILANPA 70 (435)
Q Consensus 14 s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~--------~v~~lVli~~~ 70 (435)
-.+++...+...++.....++++|++||+|||||.+.+.+...+++ .++++|-++++
T Consensus 160 ~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~p 224 (473)
T KOG2369|consen 160 ERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKWVEAEGPAWCDKYIKSFVNIGAP 224 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhcccccchhHHHHHHHHHHccCch
Confidence 4567788888888888777777899999999999999999998877 35566655544
|
|
| >PLN02606 palmitoyl-protein thioesterase | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.38 Score=43.09 Aligned_cols=55 Identities=11% Similarity=0.032 Sum_probs=40.6
Q ss_pred hHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCC--ceeEEEEecCCc
Q 013862 15 FTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPD--MDLVLILANPAT 71 (435)
Q Consensus 15 ~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~--~v~~lVli~~~~ 71 (435)
+.+.++.+.+-+...... .+-++++|+|-||.++-.++.+.|+ .|+.+|.++++-
T Consensus 76 ~~~Qv~~vce~l~~~~~L--~~G~naIGfSQGglflRa~ierc~~~p~V~nlISlggph 132 (306)
T PLN02606 76 LRQQASIACEKIKQMKEL--SEGYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGGPH 132 (306)
T ss_pred HHHHHHHHHHHHhcchhh--cCceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecCCc
Confidence 455555555555442221 2359999999999999999999987 499999998763
|
|
| >PLN03016 sinapoylglucose-malate O-sinapoyltransferase | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.19 Score=48.22 Aligned_cols=59 Identities=17% Similarity=0.171 Sum_probs=46.8
Q ss_pred cceEEEEeeCCCCCCCChhHHHHHHhhCC------------------------C-ceEEEeCCCCccccccCchhHHHHH
Q 013862 174 KAQTLILCSGRDQLLPSEEEGDRLCRALP------------------------N-CQTRRFGGGGHFLFLEDGVDLVTTI 228 (435)
Q Consensus 174 ~~Pvlii~G~~D~~~~~~~~~~~~~~~~~------------------------~-~~~~~i~~~gH~~~~e~pe~~~~~I 228 (435)
..+||+..|+.|.+++.. ..+.+.+.+. + .+++.+.+|||+++ .+|++..+.+
T Consensus 347 ~irVLiY~Gd~D~icn~~-Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~ 424 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFL-ATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMF 424 (433)
T ss_pred CceEEEEECCccccCCcH-hHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHH
Confidence 479999999999999988 4555554332 2 46777889999996 5999999999
Q ss_pred hhcccccc
Q 013862 229 KGAGYYRR 236 (435)
Q Consensus 229 ~~~~Fl~~ 236 (435)
.. |+..
T Consensus 425 ~~--Fi~~ 430 (433)
T PLN03016 425 QR--WISG 430 (433)
T ss_pred HH--HHcC
Confidence 99 8754
|
|
| >PLN02517 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.0077 Score=58.32 Aligned_cols=57 Identities=12% Similarity=0.036 Sum_probs=43.8
Q ss_pred hHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCC---------------CceeEEEEecCCc
Q 013862 15 FTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNP---------------DMDLVLILANPAT 71 (435)
Q Consensus 15 ~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p---------------~~v~~lVli~~~~ 71 (435)
-+++-..+..+|+.......++|++|+||||||.+++.+...-. +.|++.|.++++.
T Consensus 192 rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~ 263 (642)
T PLN02517 192 RDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPF 263 (642)
T ss_pred hhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheeccccc
Confidence 36777788888887765555689999999999999998776321 2478888888764
|
|
| >PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.02 Score=49.48 Aligned_cols=42 Identities=19% Similarity=0.131 Sum_probs=25.4
Q ss_pred ChHHHHHHHHHHHH-HhhhcCC-CCCEEEEEeChhHHHHHHHHH
Q 013862 14 HFTGLLKLIERTIR-SENCRSS-NRPVYLVGESLGACLALAVAA 55 (435)
Q Consensus 14 s~~~~a~dl~~~l~-~l~~~~~-~~~~~lvGhS~Gg~va~~~a~ 55 (435)
+++..++.+.+-|. .+..... ..++++|||||||.++-.+..
T Consensus 54 gI~~~g~rL~~eI~~~~~~~~~~~~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 54 GIDVCGERLAEEILEHIKDYESKIRKISFIGHSLGGLIARYALG 97 (217)
T ss_pred hhHHHHHHHHHHHHHhccccccccccceEEEecccHHHHHHHHH
Confidence 45555555543333 2222111 248999999999999865544
|
|
| >TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.022 Score=58.06 Aligned_cols=45 Identities=18% Similarity=0.131 Sum_probs=37.9
Q ss_pred CChHHHHHHHHHHHHHhh------hc------CCCCCEEEEEeChhHHHHHHHHHhC
Q 013862 13 HHFTGLLKLIERTIRSEN------CR------SSNRPVYLVGESLGACLALAVAARN 57 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~------~~------~~~~~~~lvGhS~Gg~va~~~a~~~ 57 (435)
.++++.+.|+..+...++ .. .+..+++++||||||+++..++...
T Consensus 520 Dn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 520 DNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred cCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhc
Confidence 378999999999999987 21 3456999999999999999999753
|
Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae |
| >PLN02633 palmitoyl protein thioesterase family protein | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.47 Score=42.59 Aligned_cols=56 Identities=13% Similarity=0.038 Sum_probs=42.7
Q ss_pred ChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCC--ceeEEEEecCCc
Q 013862 14 HFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPD--MDLVLILANPAT 71 (435)
Q Consensus 14 s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~--~v~~lVli~~~~ 71 (435)
.+.+.++.+.+-+...... ..-++++|+|-||.++-.++.+.|+ .|+.+|.++++-
T Consensus 74 ~~~~Qve~vce~l~~~~~l--~~G~naIGfSQGGlflRa~ierc~~~p~V~nlISlggph 131 (314)
T PLN02633 74 PLTQQAEIACEKVKQMKEL--SQGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPH 131 (314)
T ss_pred CHHHHHHHHHHHHhhchhh--hCcEEEEEEccchHHHHHHHHHCCCCCCcceEEEecCCC
Confidence 4566666666666553221 2359999999999999999999987 599999998763
|
|
| >KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.043 Score=53.23 Aligned_cols=57 Identities=19% Similarity=0.155 Sum_probs=45.7
Q ss_pred CChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCC
Q 013862 13 HHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPA 70 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~ 70 (435)
..++|.++-+.-+.++.+.- .-+++.+-|+|+||++++....++|+-++..|.-+|.
T Consensus 705 VE~eDQVeglq~Laeq~gfi-dmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapV 761 (867)
T KOG2281|consen 705 VEVEDQVEGLQMLAEQTGFI-DMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPV 761 (867)
T ss_pred eeehhhHHHHHHHHHhcCcc-cchheeEeccccccHHHHHHhhcCcceeeEEeccCcc
Confidence 35788888888888888642 2358999999999999999999999988866654444
|
|
| >PRK05906 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.047 Score=52.33 Aligned_cols=113 Identities=12% Similarity=-0.002 Sum_probs=66.1
Q ss_pred CCCCEEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcchHHHH----HHhCCccc-cHH---HH
Q 013862 290 SEGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTF----RIMGSVPV-SAI---NF 361 (435)
Q Consensus 290 ~~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~~~~-~r~---~~ 361 (435)
..+|+|+++-|... ++....... . ..++..+.++. ++| .+-.++ ...|.--+ .++ ++
T Consensus 138 ~gkGvIllt~H~GN-WEl~~~~l~--~--~~p~~~vyRp~--kNp--------~ld~li~~~R~r~G~~lI~~~~giR~l 202 (454)
T PRK05906 138 EQEGAILFCGHQAN-WELPFLYIT--K--RYPGLAFAKPI--KNR--------RLNKKIFSLRESFKGKIVPPKNGINQA 202 (454)
T ss_pred CCCCEEEEeehhhH-HHHHHHHHH--c--CCCeEEEEecC--CCH--------HHHHHHHHHHHhcCCeeecCchHHHHH
Confidence 46799999999854 355332222 1 23355555542 222 133443 33344333 222 78
Q ss_pred HHHhcCCCeEEEecCccccccccCCccc---eeecCCchhHHHHHHHcCCCEEEEEEecchh
Q 013862 362 YKLVSSKAHVLLYPGGVREAFHRKGEEY---KLFWPESSEFVRVAAAFGGKIVPFGVVGEDD 420 (435)
Q Consensus 362 ~~~l~~g~~~~ifPeG~~~~~~~~~~~~---~~~~~~~~g~~~~a~~~~~~ivPv~~~g~~~ 420 (435)
.++|++|+.|+|-|.-... ..|... ..+-..-+|.++||.++|+||||+++.-..+
T Consensus 203 iraLk~G~~vgiL~DQ~~~---~~Gv~VpFFG~~a~T~tgpA~LA~rtgApVVpv~~~R~~~ 261 (454)
T PRK05906 203 LRALHQGEVVGIVGDQALL---SSSYSYPLFGSQAFTTTSPALLAYKTGKPVIAVAIYRKPN 261 (454)
T ss_pred HHHHhcCCEEEEEeCCCCC---CCceEeCCCCCccchhhHHHHHHHHhCCeEEEEEEEEeCC
Confidence 8899999999999754321 111111 1111246899999999999999999974433
|
|
| >KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.012 Score=58.30 Aligned_cols=60 Identities=20% Similarity=0.215 Sum_probs=38.8
Q ss_pred CCChHHHHHHHHHHHHHhhh------cCC---CCCEEEEEeChhHHHHHHHHHh---CCCceeEEEEecCCc
Q 013862 12 GHHFTGLLKLIERTIRSENC------RSS---NRPVYLVGESLGACLALAVAAR---NPDMDLVLILANPAT 71 (435)
Q Consensus 12 ~~s~~~~a~dl~~~l~~l~~------~~~---~~~~~lvGhS~Gg~va~~~a~~---~p~~v~~lVli~~~~ 71 (435)
+.++.+.++-+.+.|..+-. +++ +..++|+||||||++|...+.. .++.|+-++..+++.
T Consensus 149 G~~l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH 220 (973)
T KOG3724|consen 149 GHILLDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPH 220 (973)
T ss_pred cHhHHHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCcc
Confidence 34677777777666665421 111 3459999999999999876643 245566666666553
|
|
| >PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.28 Score=43.48 Aligned_cols=55 Identities=15% Similarity=0.058 Sum_probs=36.7
Q ss_pred hHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCC-ceeEEEEecCCc
Q 013862 15 FTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPD-MDLVLILANPAT 71 (435)
Q Consensus 15 ~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~-~v~~lVli~~~~ 71 (435)
+++.++.+.+.+...... ..-++++|+|-||.++-.++.+.|+ .|+.+|.++++-
T Consensus 61 v~~Qv~~vc~~l~~~p~L--~~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph 116 (279)
T PF02089_consen 61 VNDQVEQVCEQLANDPEL--ANGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPH 116 (279)
T ss_dssp HHHHHHHHHHHHHH-GGG--TT-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--T
T ss_pred HHHHHHHHHHHHhhChhh--hcceeeeeeccccHHHHHHHHHCCCCCceeEEEecCcc
Confidence 355555555555543221 2359999999999999999999876 699999998763
|
Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A. |
| >KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.031 Score=49.95 Aligned_cols=37 Identities=22% Similarity=0.230 Sum_probs=31.6
Q ss_pred CCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCC
Q 013862 33 SSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPA 70 (435)
Q Consensus 33 ~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~ 70 (435)
++.+.++|.|+|.||+-+..+|..||+ |+++|+-+..
T Consensus 308 f~~edIilygWSIGGF~~~waAs~YPd-VkavvLDAtF 344 (517)
T KOG1553|consen 308 FRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDATF 344 (517)
T ss_pred CCccceEEEEeecCCchHHHHhhcCCC-ceEEEeecch
Confidence 345789999999999999999999996 8888876654
|
|
| >COG1770 PtrB Protease II [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.11 Score=51.06 Aligned_cols=62 Identities=23% Similarity=0.273 Sum_probs=48.8
Q ss_pred CCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccc
Q 013862 10 QIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSF 73 (435)
Q Consensus 10 ~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~ 73 (435)
....|+.|+++....+++.=-. ..+.++++|-|.||+++...+...|+.++++|+--|....
T Consensus 503 ~K~NTf~DFIa~a~~Lv~~g~~--~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDv 564 (682)
T COG1770 503 NKKNTFTDFIAAARHLVKEGYT--SPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDV 564 (682)
T ss_pred hccccHHHHHHHHHHHHHcCcC--CccceEEeccCchhHHHHHHHhhChhhhhheeecCCccch
Confidence 3456788888777777664222 1357999999999999999999999999999988877643
|
|
| >PRK15174 Vi polysaccharide export protein VexE; Provisional | Back alignment and domain information |
|---|
Probab=95.43 E-value=0.11 Score=53.25 Aligned_cols=108 Identities=13% Similarity=0.010 Sum_probs=61.7
Q ss_pred CCCCEEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcchHHHHHHhCCccc--c-------HHH
Q 013862 290 SEGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRIMGSVPV--S-------AIN 360 (435)
Q Consensus 290 ~~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~-------r~~ 360 (435)
..+|+|+++-|... ++....+... .+.++..+.+..-. ++ ...|.-.+ + -..
T Consensus 477 ~~kgvi~~t~H~gn-wE~~~~~~~~---~~~~~~~i~r~~~~------------~R---~~~g~~~i~~~~~~~~~~~r~ 537 (656)
T PRK15174 477 DQRGCIIVSAHLGA-MYAGPMILSL---LEMNSKWVASTPGV------------LK---GGYGERLISVSDKSEADVVRA 537 (656)
T ss_pred cCCCEEEEecCcch-hhHHHHHHHH---cCCCceeeecchHH------------HH---HhcCCceeccCCCCcchHHHH
Confidence 46799999999854 3554433322 22234433333210 22 33333223 1 127
Q ss_pred HHHHhcCCCeEEEecCccccccccCCccceeecCCchhHHHHHHHcCCCEEEEEEe
Q 013862 361 FYKLVSSKAHVLLYPGGVREAFHRKGEEYKLFWPESSEFVRVAAAFGGKIVPFGVV 416 (435)
Q Consensus 361 ~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~ivPv~~~ 416 (435)
+.++|++|+.|+|-|--.-......-......-.+-+|.++||.++++||||+++.
T Consensus 538 i~~aLk~g~~v~il~Dq~~~~~~~~v~FfG~~a~~~~g~~~lA~~~~~pvv~~~~~ 593 (656)
T PRK15174 538 CMQTLHSGQSLVVAIDGALNLSAPTIDFFGQQITYSTFCSRLAWKMHLPTVFSVPI 593 (656)
T ss_pred HHHHHHcCCeEEEEeCCCCCCCCceeccCCCccCcCcHHHHHHHHHCCCEEEeEEE
Confidence 88999999999999543321000010111112236799999999999999999994
|
|
| >COG4782 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.039 Score=50.07 Aligned_cols=58 Identities=22% Similarity=0.279 Sum_probs=41.2
Q ss_pred CChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhC--------CCceeEEEEecCC
Q 013862 13 HHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARN--------PDMDLVLILANPA 70 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~--------p~~v~~lVli~~~ 70 (435)
.|-+.-..+++.+|+.|....+.++++|++||||..++++...+- +.+++-+|+-+|-
T Consensus 168 eS~~~Sr~aLe~~lr~La~~~~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPD 233 (377)
T COG4782 168 ESTNYSRPALERLLRYLATDKPVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPD 233 (377)
T ss_pred hhhhhhHHHHHHHHHHHHhCCCCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCC
Confidence 344555677888888887766667999999999999998776542 2345666665554
|
|
| >COG4099 Predicted peptidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.035 Score=48.75 Aligned_cols=37 Identities=22% Similarity=0.284 Sum_probs=34.4
Q ss_pred CCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCc
Q 013862 35 NRPVYLVGESLGACLALAVAARNPDMDLVLILANPAT 71 (435)
Q Consensus 35 ~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~ 71 (435)
..++.++|.|+||+-++.++.++|+.+++.+++++..
T Consensus 268 ~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~ 304 (387)
T COG4099 268 RSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGG 304 (387)
T ss_pred cceEEEEeecCcchhhHHHHHhCchhhheeeeecCCC
Confidence 4689999999999999999999999999999998874
|
|
| >PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins | Back alignment and domain information |
|---|
Probab=95.19 E-value=0.052 Score=49.85 Aligned_cols=41 Identities=27% Similarity=0.332 Sum_probs=32.1
Q ss_pred CCCCEEEEEeChhHHHHHHHHHhCCC-----ceeEEEEecCCcccc
Q 013862 34 SNRPVYLVGESLGACLALAVAARNPD-----MDLVLILANPATSFR 74 (435)
Q Consensus 34 ~~~~~~lvGhS~Gg~va~~~a~~~p~-----~v~~lVli~~~~~~~ 74 (435)
+++|+.|||||+|+.+...+...-.+ .|+.+++++.+....
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~ 263 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSD 263 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCC
Confidence 45799999999999999877665443 389999998775433
|
|
| >PLN02162 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.055 Score=51.14 Aligned_cols=23 Identities=39% Similarity=0.462 Sum_probs=19.6
Q ss_pred CCCCCEEEEEeChhHHHHHHHHH
Q 013862 33 SSNRPVYLVGESLGACLALAVAA 55 (435)
Q Consensus 33 ~~~~~~~lvGhS~Gg~va~~~a~ 55 (435)
+++.++++.|||+||.+|..+|.
T Consensus 275 ~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 275 NKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred CCCceEEEEecChHHHHHHHHHH
Confidence 45568999999999999998765
|
|
| >PLN02571 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.13 E-value=0.045 Score=51.23 Aligned_cols=39 Identities=26% Similarity=0.317 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHh
Q 013862 16 TGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAAR 56 (435)
Q Consensus 16 ~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~ 56 (435)
+++.+++..+++..... +.++++.|||+||.+|...|..
T Consensus 208 ~qvl~eV~~L~~~y~~e--~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDE--EISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcc--cccEEEeccchHHHHHHHHHHH
Confidence 34455555555543221 1268999999999999988865
|
|
| >PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.048 Score=46.01 Aligned_cols=41 Identities=20% Similarity=0.316 Sum_probs=30.8
Q ss_pred ChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhC
Q 013862 14 HFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARN 57 (435)
Q Consensus 14 s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~ 57 (435)
.+.|..+....+|++.+. ++|++|+|||-|+.+..++..++
T Consensus 76 ay~DV~~AF~~yL~~~n~---GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 76 AYSDVRAAFDYYLANYNN---GRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hHHHHHHHHHHHHHhcCC---CCCEEEEEeChHHHHHHHHHHHH
Confidence 345555555556665544 68999999999999999998775
|
|
| >COG0627 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.09 E-value=0.03 Score=51.02 Aligned_cols=62 Identities=16% Similarity=0.087 Sum_probs=43.6
Q ss_pred CChHHHH-HHHHHHHHHhhhcCCC-CCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccc
Q 013862 13 HHFTGLL-KLIERTIRSENCRSSN-RPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFR 74 (435)
Q Consensus 13 ~s~~~~a-~dl~~~l~~l~~~~~~-~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~ 74 (435)
|.+++++ +++-+.+++......+ ....++||||||.=|+.+|.+||++++.+...++.....
T Consensus 127 ~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 127 YQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred cchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 5566653 3555444433221111 257799999999999999999999999999888775443
|
|
| >PLN02310 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.04 E-value=0.04 Score=51.45 Aligned_cols=41 Identities=22% Similarity=0.317 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHh
Q 013862 16 TGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAAR 56 (435)
Q Consensus 16 ~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~ 56 (435)
++..+.+..+++......++.++++.|||+||.+|...|..
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 34455666666554322233579999999999999988754
|
|
| >COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=94.71 E-value=0.094 Score=46.30 Aligned_cols=53 Identities=17% Similarity=0.172 Sum_probs=42.3
Q ss_pred HHHHHHHHHHhhhcCC--CCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCc
Q 013862 19 LKLIERTIRSENCRSS--NRPVYLVGESLGACLALAVAARNPDMDLVLILANPAT 71 (435)
Q Consensus 19 a~dl~~~l~~l~~~~~--~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~ 71 (435)
+..|.++++++..++. .+++++.|.|-||..+..+++.+|+.+.++-.+++..
T Consensus 125 Vgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 125 VGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred HHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 5555666665544433 4589999999999999999999999999998888764
|
|
| >PRK05645 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=94.69 E-value=0.062 Score=49.00 Aligned_cols=122 Identities=15% Similarity=-0.018 Sum_probs=66.1
Q ss_pred cEEeccCCCC----CCCCEEEEecCCcccchhHhhhHHHhhhcCceeeeeccccccccccCCCCCCcchHHHHHH----h
Q 013862 280 KIVRGLSGIP----SEGPVLLVGNHMLLGLEALPMVPTFVIERNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRI----M 351 (435)
Q Consensus 280 ~~~~~~~~~p----~~~~~i~v~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 351 (435)
++++|.|++- +++++|+++-|... ++.+...... .. +...+.++ .++|+ +-.++.. .
T Consensus 96 ~~~~g~e~l~~a~~~gkgvI~lt~H~Gn-WE~~~~~~~~---~~-~~~~v~r~--~~n~~--------~d~~~~~~R~~~ 160 (295)
T PRK05645 96 REVEGLEVLEQALASGKGVVGITSHLGN-WEVLNHFYCS---QC-KPIIFYRP--PKLKA--------VDELLRKQRVQL 160 (295)
T ss_pred eEecCHHHHHHHHhcCCCEEEEecchhh-HHHHHHHHHh---cC-CCeEEEeC--CCCHH--------HHHHHHHHhCCC
Confidence 3667776653 36789999999854 3553322221 11 12333322 11221 3333332 2
Q ss_pred CCccc--cH---HHHHHHhcCCCeEEEecCccccccccCCccce---eecCCchhHHHHHHHcCCCEEEEEEecc
Q 013862 352 GSVPV--SA---INFYKLVSSKAHVLLYPGGVREAFHRKGEEYK---LFWPESSEFVRVAAAFGGKIVPFGVVGE 418 (435)
Q Consensus 352 g~~~~--~r---~~~~~~l~~g~~~~ifPeG~~~~~~~~~~~~~---~~~~~~~g~~~~a~~~~~~ivPv~~~g~ 418 (435)
|..-+ +. .++.++|++|+.|+|-+--.-. ..+|...+ .....-+|...+|.++++||||+++.-.
T Consensus 161 g~~~i~~~~~~~r~l~kaLk~g~~v~il~Dq~~~--~~~gv~v~FfG~~a~t~~~~~~la~~~~~pvv~~~~~r~ 233 (295)
T PRK05645 161 GNRVAPSTKEGILSVIKEVRKGGQVGIPADPEPA--ESAGIFVPFLGTQALTSKFVPNMLAGGKAVGVFLHALRL 233 (295)
T ss_pred CCeEeecCcccHHHHHHHHhcCCeEEEcCCCCCC--CCCCeEeCCCCCchhhhhHHHHHHHhhCCeEEEEEEEEc
Confidence 33222 22 2788899999999998542211 01111111 1111335677899999999999999643
|
|
| >PLN00413 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.68 E-value=0.089 Score=49.91 Aligned_cols=35 Identities=26% Similarity=0.444 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHH
Q 013862 17 GLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAA 55 (435)
Q Consensus 17 ~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~ 55 (435)
++.+.+.++++. +++.++++.|||+||.+|..+|.
T Consensus 269 ~i~~~Lk~ll~~----~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 269 TILRHLKEIFDQ----NPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHH----CCCCeEEEEecCHHHHHHHHHHH
Confidence 344455555543 44568999999999999998875
|
|
| >KOG3101 consensus Esterase D [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.58 E-value=0.0071 Score=50.11 Aligned_cols=55 Identities=22% Similarity=0.225 Sum_probs=40.0
Q ss_pred HHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccc
Q 013862 19 LKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSF 73 (435)
Q Consensus 19 a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~ 73 (435)
++.+.+++..-...-...++.+.||||||.=|+..+.++|++.+++-..+|.+.+
T Consensus 124 ~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP 178 (283)
T KOG3101|consen 124 VKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNP 178 (283)
T ss_pred HHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCc
Confidence 3455555553323222356999999999999999999999998888777776543
|
|
| >PLN03037 lipase class 3 family protein; Provisional | Back alignment and domain information |
|---|
Probab=94.55 E-value=0.061 Score=51.54 Aligned_cols=40 Identities=25% Similarity=0.332 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHh
Q 013862 17 GLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAAR 56 (435)
Q Consensus 17 ~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~ 56 (435)
+..+++..+++.......+.++++.|||+||.+|...|..
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 3456666777655432223579999999999999988754
|
|
| >PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins | Back alignment and domain information |
|---|
Probab=94.51 E-value=0.096 Score=47.32 Aligned_cols=45 Identities=18% Similarity=0.217 Sum_probs=36.0
Q ss_pred CChHHHHHHHHHHHHHhhhcC---CCCCEEEEEeChhHHHHHHHHHhC
Q 013862 13 HHFTGLLKLIERTIRSENCRS---SNRPVYLVGESLGACLALAVAARN 57 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~~---~~~~~~lvGhS~Gg~va~~~a~~~ 57 (435)
.+.++++.|-.+.++.|.... ..+.+++.|||+||.++...+..+
T Consensus 189 ~s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 189 PSRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred CCHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 467999999999999986422 236799999999999998866655
|
|
| >PLN02408 phospholipase A1 | Back alignment and domain information |
|---|
Probab=93.77 E-value=0.13 Score=47.62 Aligned_cols=21 Identities=38% Similarity=0.426 Sum_probs=18.4
Q ss_pred CEEEEEeChhHHHHHHHHHhC
Q 013862 37 PVYLVGESLGACLALAVAARN 57 (435)
Q Consensus 37 ~~~lvGhS~Gg~va~~~a~~~ 57 (435)
++++.|||+||.+|...|...
T Consensus 201 sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 201 SLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred eEEEeccchHHHHHHHHHHHH
Confidence 599999999999999888653
|
|
| >COG2936 Predicted acyl esterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.69 E-value=0.75 Score=45.04 Aligned_cols=50 Identities=20% Similarity=0.059 Sum_probs=39.5
Q ss_pred HHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcc
Q 013862 21 LIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATS 72 (435)
Q Consensus 21 dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~ 72 (435)
|+.+.+..... .+.++..+|-|++|+..+.+|+..|..+++++...+...
T Consensus 111 D~I~Wia~QpW--sNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 111 DTIEWLAKQPW--SNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred HHHHHHHhCCc--cCCeeeeecccHHHHHHHHHHhcCCchheeecccccccc
Confidence 44555554333 356899999999999999999999999999988877754
|
|
| >PLN02934 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=93.69 E-value=0.096 Score=50.12 Aligned_cols=34 Identities=24% Similarity=0.354 Sum_probs=24.8
Q ss_pred HHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHH
Q 013862 22 IERTIRSENCRSSNRPVYLVGESLGACLALAVAA 55 (435)
Q Consensus 22 l~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~ 55 (435)
+.+.++.+...+++.++++.|||+||.+|..+|.
T Consensus 307 v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 307 VRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 3333444434456679999999999999998874
|
|
| >PLN02324 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=93.64 E-value=0.16 Score=47.51 Aligned_cols=20 Identities=35% Similarity=0.564 Sum_probs=17.9
Q ss_pred CEEEEEeChhHHHHHHHHHh
Q 013862 37 PVYLVGESLGACLALAVAAR 56 (435)
Q Consensus 37 ~~~lvGhS~Gg~va~~~a~~ 56 (435)
++++.|||+||.+|...|..
T Consensus 216 sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 216 SITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred eEEEecCcHHHHHHHHHHHH
Confidence 69999999999999988864
|
|
| >KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=93.56 E-value=0.098 Score=48.24 Aligned_cols=59 Identities=20% Similarity=0.140 Sum_probs=47.6
Q ss_pred CChHHHHHHHHHHHHHhhhcCC--CCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCc
Q 013862 13 HHFTGLLKLIERTIRSENCRSS--NRPVYLVGESLGACLALAVAARNPDMDLVLILANPAT 71 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~~~--~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~ 71 (435)
.|.++...|.+.+|.+++.... ..+++.+|-|+||++|..+=.+||..|.+....+.+.
T Consensus 142 LtseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPv 202 (492)
T KOG2183|consen 142 LTSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPV 202 (492)
T ss_pred ccHHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCce
Confidence 3677778888888888866422 4589999999999999999999999988877666553
|
|
| >KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.54 E-value=0.24 Score=44.05 Aligned_cols=59 Identities=14% Similarity=0.023 Sum_probs=40.7
Q ss_pred cccceEEEEeeCCCCCCCChhHHHHHHhhC---CCceEEEeCCCCccccccCchhHHHHHhhccccc
Q 013862 172 AVKAQTLILCSGRDQLLPSEEEGDRLCRAL---PNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYR 235 (435)
Q Consensus 172 ~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~---~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~ 235 (435)
+++.|+++|.- +|.- -.+ ....+.+-. .+..++++.|+=|.-+-+-|=.+-..|.. ++.
T Consensus 285 ~arqP~~finv-~~fQ-~~e-n~~vmKki~~~n~g~~~it~~GsVHqnfsDfpfv~p~~i~k--~f~ 346 (399)
T KOG3847|consen 285 QARQPTLFINV-EDFQ-WNE-NLLVMKKIESQNEGNHVITLDGSVHQNFSDFPFVTPNWIGK--VFK 346 (399)
T ss_pred hccCCeEEEEc-cccc-chh-HHHHHHhhhCCCccceEEEEccceecccccCccccHHHHHH--Hhc
Confidence 45679999983 3333 333 344444433 34588999999999999988888888877 665
|
|
| >PLN02847 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=93.53 E-value=0.12 Score=50.22 Aligned_cols=37 Identities=22% Similarity=0.161 Sum_probs=26.3
Q ss_pred HHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHh
Q 013862 20 KLIERTIRSENCRSSNRPVYLVGESLGACLALAVAAR 56 (435)
Q Consensus 20 ~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~ 56 (435)
+.+...+..+...+++-+++++|||+||.+|..++..
T Consensus 235 ~~i~~~L~kal~~~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 235 KLSTPCLLKALDEYPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHHHHHHHHHHHHCCCCeEEEeccChHHHHHHHHHHH
Confidence 3333444444445666789999999999999987764
|
|
| >PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function | Back alignment and domain information |
|---|
Probab=93.37 E-value=0.23 Score=46.32 Aligned_cols=36 Identities=25% Similarity=0.159 Sum_probs=30.9
Q ss_pred CCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCc
Q 013862 36 RPVYLVGESLGACLALAVAARNPDMDLVLILANPAT 71 (435)
Q Consensus 36 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~ 71 (435)
-|++++|+|.||++|...|.-.|-.+++++=-++..
T Consensus 184 lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~ 219 (403)
T PF11144_consen 184 LPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYA 219 (403)
T ss_pred CcEEEEecCcHHHHHHHHHhhCccceeEEEecCccc
Confidence 489999999999999999999999999877555443
|
|
| >COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.19 E-value=0.14 Score=45.53 Aligned_cols=57 Identities=16% Similarity=0.154 Sum_probs=41.1
Q ss_pred hHHHHHHHHHHHHHhhhc-CCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCc
Q 013862 15 FTGLLKLIERTIRSENCR-SSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPAT 71 (435)
Q Consensus 15 ~~~~a~dl~~~l~~l~~~-~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~ 71 (435)
.+.++++|.-.+++.-.. .....-+|+|.|+||.+++..+..||+++..++..+|..
T Consensus 155 ~~~L~~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~ 212 (299)
T COG2382 155 WRFLAQELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSF 212 (299)
T ss_pred HHHHHHHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCcc
Confidence 445555555555543111 112346799999999999999999999999998888774
|
|
| >PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=93.17 E-value=0.16 Score=43.99 Aligned_cols=38 Identities=26% Similarity=0.209 Sum_probs=32.3
Q ss_pred CCEEEEEeChhHHHHHHHHHhCC-C-ceeEEEEecCCccc
Q 013862 36 RPVYLVGESLGACLALAVAARNP-D-MDLVLILANPATSF 73 (435)
Q Consensus 36 ~~~~lvGhS~Gg~va~~~a~~~p-~-~v~~lVli~~~~~~ 73 (435)
.++.++|||.||-.|..+|..+. + .+++||.+||....
T Consensus 120 ~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~ 159 (307)
T PF07224_consen 120 SKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGT 159 (307)
T ss_pred ceEEEeecCCccHHHHHHHhcccccCchhheecccccCCC
Confidence 57999999999999999999874 2 58999999988543
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >PLN02719 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=93.01 E-value=0.2 Score=48.04 Aligned_cols=21 Identities=33% Similarity=0.444 Sum_probs=18.4
Q ss_pred CCEEEEEeChhHHHHHHHHHh
Q 013862 36 RPVYLVGESLGACLALAVAAR 56 (435)
Q Consensus 36 ~~~~lvGhS~Gg~va~~~a~~ 56 (435)
.++++.|||+||.+|...|..
T Consensus 298 ~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 298 LSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred ceEEEecCcHHHHHHHHHHHH
Confidence 479999999999999988754
|
|
| >PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=93.01 E-value=0.34 Score=44.33 Aligned_cols=54 Identities=28% Similarity=0.313 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCC-ceeEEEEecCCc
Q 013862 17 GLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPD-MDLVLILANPAT 71 (435)
Q Consensus 17 ~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~-~v~~lVli~~~~ 71 (435)
.+..-+.+.+..+.. .+.++++|+||+.|+..+..|....+. .++++|++++..
T Consensus 175 ~~~ari~Aa~~~~~~-~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~ 229 (310)
T PF12048_consen 175 RLFARIEAAIAFAQQ-QGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYW 229 (310)
T ss_pred HHHHHHHHHHHHHHh-cCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCC
Confidence 444455555555544 344569999999999999999988764 599999999874
|
This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes. |
| >PLN02753 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=92.90 E-value=0.22 Score=47.90 Aligned_cols=22 Identities=32% Similarity=0.472 Sum_probs=19.1
Q ss_pred CCCEEEEEeChhHHHHHHHHHh
Q 013862 35 NRPVYLVGESLGACLALAVAAR 56 (435)
Q Consensus 35 ~~~~~lvGhS~Gg~va~~~a~~ 56 (435)
+.++++.|||+||.+|...|..
T Consensus 311 ~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 311 DLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred CceEEEEccCHHHHHHHHHHHH
Confidence 3589999999999999988753
|
|
| >PLN02802 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=92.49 E-value=0.2 Score=48.03 Aligned_cols=21 Identities=48% Similarity=0.607 Sum_probs=18.3
Q ss_pred CEEEEEeChhHHHHHHHHHhC
Q 013862 37 PVYLVGESLGACLALAVAARN 57 (435)
Q Consensus 37 ~~~lvGhS~Gg~va~~~a~~~ 57 (435)
++++.|||+||.+|...|...
T Consensus 331 sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 331 SITVTGHSLGAALALLVADEL 351 (509)
T ss_pred eEEEeccchHHHHHHHHHHHH
Confidence 689999999999999887653
|
|
| >PLN02761 lipase class 3 family protein | Back alignment and domain information |
|---|
Probab=92.49 E-value=0.26 Score=47.43 Aligned_cols=21 Identities=43% Similarity=0.520 Sum_probs=18.2
Q ss_pred CCEEEEEeChhHHHHHHHHHh
Q 013862 36 RPVYLVGESLGACLALAVAAR 56 (435)
Q Consensus 36 ~~~~lvGhS~Gg~va~~~a~~ 56 (435)
-++++.|||+||.+|...|..
T Consensus 294 ~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 294 ISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred ceEEEeccchHHHHHHHHHHH
Confidence 479999999999999988753
|
|
| >KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=92.09 E-value=0.45 Score=45.23 Aligned_cols=59 Identities=12% Similarity=0.138 Sum_probs=50.8
Q ss_pred CChHHHHHHHHHHHHHhhhcCC---CCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCc
Q 013862 13 HHFTGLLKLIERTIRSENCRSS---NRPVYLVGESLGACLALAVAARNPDMDLVLILANPAT 71 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~~~---~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~ 71 (435)
.|......|+.++|++++...+ +.|.+.+|-|+-|.++..+=..+|+.+.+-|..+++.
T Consensus 146 LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv 207 (514)
T KOG2182|consen 146 LSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPV 207 (514)
T ss_pred hhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccce
Confidence 3678889999999999988653 2389999999999999999999999999988777664
|
|
| >COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.05 E-value=0.23 Score=44.87 Aligned_cols=64 Identities=16% Similarity=0.350 Sum_probs=46.5
Q ss_pred hccccc-ceEEEEeeCCCCCCCChhHHHHHHhhCCC--ceEEEeCCCCccccccCch---hHHHHHhhccccc
Q 013862 169 RLDAVK-AQTLILCSGRDQLLPSEEEGDRLCRALPN--CQTRRFGGGGHFLFLEDGV---DLVTTIKGAGYYR 235 (435)
Q Consensus 169 ~l~~i~-~Pvlii~G~~D~~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~pe---~~~~~I~~~~Fl~ 235 (435)
.+..+. +|+|+++|++|..+|.. ....+.+.... .+...+++++|......+. +....+.+ |+.
T Consensus 226 ~~~~i~~~P~l~~~G~~D~~vp~~-~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~--f~~ 295 (299)
T COG1073 226 DAEKISPRPVLLVHGERDEVVPLR-DAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAE--FLE 295 (299)
T ss_pred hHhhcCCcceEEEecCCCcccchh-hhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHH--HHH
Confidence 344444 79999999999999998 67777776655 5777888899988865443 45555555 554
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.73 E-value=5.4 Score=42.58 Aligned_cols=58 Identities=29% Similarity=0.431 Sum_probs=42.0
Q ss_pred CChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCC--CceeEEEEecCCccc
Q 013862 13 HHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNP--DMDLVLILANPATSF 73 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p--~~v~~lVli~~~~~~ 73 (435)
.|+++.+.....-++++ .|..|+.|+|+|+|+.++..+|.... +....+|++++.+.+
T Consensus 2162 dSies~A~~yirqirkv---QP~GPYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGspty 2221 (2376)
T KOG1202|consen 2162 DSIESLAAYYIRQIRKV---QPEGPYRLAGYSYGACLAFEMASQLQEQQSPAPLILLDGSPTY 2221 (2376)
T ss_pred chHHHHHHHHHHHHHhc---CCCCCeeeeccchhHHHHHHHHHHHHhhcCCCcEEEecCchHH
Confidence 35666666555555555 44579999999999999999986543 345669999987643
|
|
| >COG3150 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.57 E-value=0.55 Score=37.81 Aligned_cols=55 Identities=24% Similarity=0.256 Sum_probs=43.7
Q ss_pred CCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCc
Q 013862 10 QIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPAT 71 (435)
Q Consensus 10 ~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~ 71 (435)
.-..++...++.+..++..++. +...|+|-|+||+.|..++.++. ++ -|+++|..
T Consensus 37 ~l~h~p~~a~~ele~~i~~~~~----~~p~ivGssLGGY~At~l~~~~G--ir-av~~NPav 91 (191)
T COG3150 37 HLPHDPQQALKELEKAVQELGD----ESPLIVGSSLGGYYATWLGFLCG--IR-AVVFNPAV 91 (191)
T ss_pred CCCCCHHHHHHHHHHHHHHcCC----CCceEEeecchHHHHHHHHHHhC--Ch-hhhcCCCc
Confidence 3456788999999999998876 35779999999999999999875 33 35577775
|
|
| >COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.40 E-value=0.072 Score=51.50 Aligned_cols=70 Identities=16% Similarity=0.118 Sum_probs=46.8
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcC--CCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRS--SNRPVYLVGESLGACLALAVAARNPDMDLVLILANPAT 71 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~--~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~ 71 (435)
||--|.......+-+...+|..++.+.|..+. ..+++-+.|-|=||++......++||.+.++|.--|..
T Consensus 464 fGp~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPll 535 (648)
T COG1505 464 FGPEWHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLL 535 (648)
T ss_pred cCHHHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchh
Confidence 44444444334444555555565555553321 23578899999999999999999999998888665553
|
|
| >KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=91.13 E-value=0.56 Score=46.00 Aligned_cols=68 Identities=19% Similarity=0.223 Sum_probs=49.2
Q ss_pred CccccccCCC----CCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCc
Q 013862 2 YGACIFQLQI----GHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPAT 71 (435)
Q Consensus 2 yG~s~~p~~~----~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~ 71 (435)
||..|...+. ..+++|+....+-+++. +... .++..+.|.|-||.++..+...+|+.+.++|+--|..
T Consensus 513 ~G~~WHk~G~lakKqN~f~Dfia~AeyLve~-gyt~-~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~Vpfm 584 (712)
T KOG2237|consen 513 YGEQWHKDGRLAKKQNSFDDFIACAEYLVEN-GYTQ-PSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFM 584 (712)
T ss_pred cccchhhccchhhhcccHHHHHHHHHHHHHc-CCCC-ccceeEecccCccchhHHHhccCchHhhhhhhcCcce
Confidence 5666666443 35666666666665543 2222 3578999999999999999999999999988776664
|
|
| >PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A | Back alignment and domain information |
|---|
Probab=91.13 E-value=0.51 Score=43.71 Aligned_cols=36 Identities=19% Similarity=0.067 Sum_probs=26.7
Q ss_pred CCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCc
Q 013862 35 NRPVYLVGESLGACLALAVAARNPDMDLVLILANPAT 71 (435)
Q Consensus 35 ~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~ 71 (435)
.+++.++|+||||..++.+|+.. ++|++.|..+-.+
T Consensus 225 ~~RIG~~GfSmGg~~a~~LaALD-dRIka~v~~~~l~ 260 (390)
T PF12715_consen 225 PDRIGCMGFSMGGYRAWWLAALD-DRIKATVANGYLC 260 (390)
T ss_dssp EEEEEEEEEGGGHHHHHHHHHH--TT--EEEEES-B-
T ss_pred ccceEEEeecccHHHHHHHHHcc-hhhHhHhhhhhhh
Confidence 45899999999999999999886 5788888776554
|
|
| >COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=90.41 E-value=4.3 Score=35.99 Aligned_cols=59 Identities=7% Similarity=0.053 Sum_probs=44.0
Q ss_pred CCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhH-----HHHHHHHHhCCCceeEEEEecCCccc
Q 013862 10 QIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGA-----CLALAVAARNPDMDLVLILANPATSF 73 (435)
Q Consensus 10 ~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg-----~va~~~a~~~p~~v~~lVli~~~~~~ 73 (435)
....+++|+++.+.+++..++. ..++++-+--+ .+++.-+...|..-.++++++++...
T Consensus 148 ~G~FdldDYIdyvie~~~~~Gp-----~~hv~aVCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPIDa 211 (415)
T COG4553 148 AGHFDLDDYIDYVIEMINFLGP-----DAHVMAVCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDA 211 (415)
T ss_pred cCCccHHHHHHHHHHHHHHhCC-----CCcEEEEecCCchHHHHHHHHHhcCCCCCCceeeeecCcccc
Confidence 3457899999999999999977 47777776544 34444445567778899999987644
|
|
| >PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase | Back alignment and domain information |
|---|
Probab=89.61 E-value=0.87 Score=41.97 Aligned_cols=59 Identities=17% Similarity=0.171 Sum_probs=46.1
Q ss_pred cceEEEEeeCCCCCCCChhHHHHHHhhCC------------------------C-ceEEEeCCCCccccccCchhHHHHH
Q 013862 174 KAQTLILCSGRDQLLPSEEEGDRLCRALP------------------------N-CQTRRFGGGGHFLFLEDGVDLVTTI 228 (435)
Q Consensus 174 ~~Pvlii~G~~D~~~~~~~~~~~~~~~~~------------------------~-~~~~~i~~~gH~~~~e~pe~~~~~I 228 (435)
.+++|+..|+.|.+++.. ..+.+.+.+. + .++..+.+|||+++ .+|+...+.+
T Consensus 233 ~i~VliY~Gd~D~icn~~-g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~ 310 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFL-ATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMF 310 (319)
T ss_pred CceEEEEECCcCeeCCcH-hHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHH
Confidence 479999999999999987 4555544332 2 46677789999997 5999999999
Q ss_pred hhcccccc
Q 013862 229 KGAGYYRR 236 (435)
Q Consensus 229 ~~~~Fl~~ 236 (435)
.+ |+..
T Consensus 311 ~~--fi~~ 316 (319)
T PLN02213 311 QR--WISG 316 (319)
T ss_pred HH--HHcC
Confidence 99 7754
|
|
| >COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.46 E-value=3.3 Score=38.02 Aligned_cols=63 Identities=13% Similarity=0.145 Sum_probs=47.7
Q ss_pred hcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCc-eEEEeCCCCccccccCchhHHHHHhhccccccc
Q 013862 169 RLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNC-QTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRRG 237 (435)
Q Consensus 169 ~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~-~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~~ 237 (435)
...++..|-.++.|+.|.+..++ .+.-..+.+|+. .+..+||..|... +..+.+.+.. |+.+-
T Consensus 324 y~~RLalpKyivnaSgDdff~pD-sa~lYyd~LPG~kaLrmvPN~~H~~~---n~~i~esl~~--flnrf 387 (507)
T COG4287 324 YQLRLALPKYIVNASGDDFFVPD-SANLYYDDLPGEKALRMVPNDPHNLI---NQFIKESLEP--FLNRF 387 (507)
T ss_pred hhhhccccceeecccCCcccCCC-ccceeeccCCCceeeeeCCCCcchhh---HHHHHHHHHH--HHHHH
Confidence 34567899999999999999999 688888999986 5788999988764 4444555555 55433
|
|
| >COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism] | Back alignment and domain information |
|---|
Probab=89.13 E-value=0.76 Score=40.28 Aligned_cols=40 Identities=18% Similarity=0.216 Sum_probs=30.1
Q ss_pred HHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCC
Q 013862 19 LKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNP 58 (435)
Q Consensus 19 a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p 58 (435)
-.+..+++......+++.++.|-|||+||.+|..+..++.
T Consensus 259 ySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 259 YSAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred hHHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccC
Confidence 3344445555555577889999999999999999888763
|
|
| >KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.13 E-value=0.76 Score=40.28 Aligned_cols=40 Identities=18% Similarity=0.216 Sum_probs=30.1
Q ss_pred HHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCC
Q 013862 19 LKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNP 58 (435)
Q Consensus 19 a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p 58 (435)
-.+..+++......+++.++.|-|||+||.+|..+..++.
T Consensus 259 ySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 259 YSAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred hHHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccC
Confidence 3344445555555577889999999999999999888763
|
|
| >PLN02209 serine carboxypeptidase | Back alignment and domain information |
|---|
Probab=89.05 E-value=1 Score=43.36 Aligned_cols=59 Identities=17% Similarity=0.201 Sum_probs=47.1
Q ss_pred cceEEEEeeCCCCCCCChhHHHHHHhhCC------------------------C-ceEEEeCCCCccccccCchhHHHHH
Q 013862 174 KAQTLILCSGRDQLLPSEEEGDRLCRALP------------------------N-CQTRRFGGGGHFLFLEDGVDLVTTI 228 (435)
Q Consensus 174 ~~Pvlii~G~~D~~~~~~~~~~~~~~~~~------------------------~-~~~~~i~~~gH~~~~e~pe~~~~~I 228 (435)
.+++|+..|+.|.+++.. ..+.+.+.+. + .+++.+.+|||+++ .+|++..+.+
T Consensus 351 girVLiY~GD~D~icn~~-Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~ 428 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQ-ATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMF 428 (437)
T ss_pred CceEEEEECCccccCCcH-hHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHH
Confidence 479999999999999987 4665555432 2 56777889999996 6999999999
Q ss_pred hhcccccc
Q 013862 229 KGAGYYRR 236 (435)
Q Consensus 229 ~~~~Fl~~ 236 (435)
.+ |+..
T Consensus 429 ~~--fi~~ 434 (437)
T PLN02209 429 QR--WISG 434 (437)
T ss_pred HH--HHcC
Confidence 99 7753
|
|
| >KOG4569 consensus Predicted lipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=87.84 E-value=0.8 Score=42.49 Aligned_cols=37 Identities=32% Similarity=0.432 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHh
Q 013862 16 TGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAAR 56 (435)
Q Consensus 16 ~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~ 56 (435)
..+.+++..+++.. ++-++.+-|||+||.+|...|..
T Consensus 155 ~~~~~~~~~L~~~~----~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELY----PNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhc----CCcEEEEecCChHHHHHHHHHHH
Confidence 34455555555544 34689999999999999988754
|
|
| >KOG2898 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=87.83 E-value=0.57 Score=42.94 Aligned_cols=54 Identities=17% Similarity=0.207 Sum_probs=34.1
Q ss_pred HHHHhcCC--CeEEEecCccccccccCCccceeecCCchhHHHHHHHcCCCEEEEEEecchhhhhh
Q 013862 361 FYKLVSSK--AHVLLYPGGVREAFHRKGEEYKLFWPESSEFVRVAAAFGGKIVPFGVVGEDDLAQV 424 (435)
Q Consensus 361 ~~~~l~~g--~~~~ifPeG~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~ivPv~~~g~~~~~~~ 424 (435)
..++..++ ..+++|||||=. .+....++++ +|- .+.+..|.|+++.-...+...
T Consensus 202 ~~e~~~~~~~~~ii~fpegtCi-----nn~~~~~fk~-k~~----~e~~~~i~pvaik~~~~~~~~ 257 (354)
T KOG2898|consen 202 LAEHVWNERKEPILLFPEGTCI-----NNTKVMQFKL-KGS----FEEGVKIYPVAIKYDPRFGDA 257 (354)
T ss_pred hhHHHhcCCCCcEEEeecceee-----CCceeEEEec-CCC----hhhcceeeeeeeecCcccccc
Confidence 33444444 499999999865 3334444333 443 467889999999866554443
|
|
| >KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=87.61 E-value=1.3 Score=42.63 Aligned_cols=61 Identities=13% Similarity=0.212 Sum_probs=47.3
Q ss_pred cceEEEEeeCCCCCCCChhHHHHHHhhCC-------------------------CceEEEeCCCCccccccCchhHHHHH
Q 013862 174 KAQTLILCSGRDQLLPSEEEGDRLCRALP-------------------------NCQTRRFGGGGHFLFLEDGVDLVTTI 228 (435)
Q Consensus 174 ~~Pvlii~G~~D~~~~~~~~~~~~~~~~~-------------------------~~~~~~i~~~gH~~~~e~pe~~~~~I 228 (435)
..+++|..|+.|.++|.. ..+.+.+.+. +..+..+.|+||++..++|+.....+
T Consensus 363 ~~rvliysGD~D~~~p~~-gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~ 441 (454)
T KOG1282|consen 363 GYRVLIYSGDHDLVVPFL-GTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIMF 441 (454)
T ss_pred ceEEEEEeCCcceeCcch-hhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHHH
Confidence 379999999999999987 3444333211 23457788999999999999999999
Q ss_pred hhccccccc
Q 013862 229 KGAGYYRRG 237 (435)
Q Consensus 229 ~~~~Fl~~~ 237 (435)
.. |+...
T Consensus 442 ~~--fl~g~ 448 (454)
T KOG1282|consen 442 QR--FLNGQ 448 (454)
T ss_pred HH--HHcCC
Confidence 99 77643
|
|
| >KOG3967 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=87.13 E-value=2.1 Score=35.98 Aligned_cols=36 Identities=31% Similarity=0.535 Sum_probs=31.6
Q ss_pred CCEEEEEeChhHHHHHHHHHhCCC--ceeEEEEecCCc
Q 013862 36 RPVYLVGESLGACLALAVAARNPD--MDLVLILANPAT 71 (435)
Q Consensus 36 ~~~~lvGhS~Gg~va~~~a~~~p~--~v~~lVli~~~~ 71 (435)
+.+.++.||+||...+.+..++|+ +|.++.+.+++.
T Consensus 190 ~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~ 227 (297)
T KOG3967|consen 190 ESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAM 227 (297)
T ss_pred ceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccc
Confidence 589999999999999999999985 688888888774
|
|
| >cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc | Back alignment and domain information |
|---|
Probab=86.19 E-value=0.6 Score=46.11 Aligned_cols=37 Identities=16% Similarity=0.116 Sum_probs=30.0
Q ss_pred CCCEEEEEeChhHHHHHHHHHh--CCCceeEEEEecCCc
Q 013862 35 NRPVYLVGESLGACLALAVAAR--NPDMDLVLILANPAT 71 (435)
Q Consensus 35 ~~~~~lvGhS~Gg~va~~~a~~--~p~~v~~lVli~~~~ 71 (435)
.++++|+|+|.||..+..++.. .+..++++|++++..
T Consensus 175 ~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~ 213 (493)
T cd00312 175 PDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSA 213 (493)
T ss_pred cceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCc
Confidence 4689999999999999887765 245789999888764
|
) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. |
| >PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants | Back alignment and domain information |
|---|
Probab=86.01 E-value=2 Score=37.34 Aligned_cols=35 Identities=34% Similarity=0.279 Sum_probs=27.6
Q ss_pred CCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCC
Q 013862 36 RPVYLVGESLGACLALAVAARNPDMDLVLILANPA 70 (435)
Q Consensus 36 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~ 70 (435)
-|++-+|||+|+-+-+.+...++..-++-|+++-.
T Consensus 90 lP~~~vGHSlGcklhlLi~s~~~~~r~gniliSFN 124 (250)
T PF07082_consen 90 LPVYGVGHSLGCKLHLLIGSLFDVERAGNILISFN 124 (250)
T ss_pred CCeeeeecccchHHHHHHhhhccCcccceEEEecC
Confidence 37889999999999999888876555677777644
|
Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis. |
| >COG2830 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=85.25 E-value=4.1 Score=32.62 Aligned_cols=34 Identities=21% Similarity=0.015 Sum_probs=26.9
Q ss_pred CEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcc
Q 013862 37 PVYLVGESLGACLALAVAARNPDMDLVLILANPATS 72 (435)
Q Consensus 37 ~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~ 72 (435)
.+.||++|||-.+|-++....+ +++.+.+++.+.
T Consensus 58 hirlvAwSMGVwvAeR~lqg~~--lksatAiNGTgL 91 (214)
T COG2830 58 HIRLVAWSMGVWVAERVLQGIR--LKSATAINGTGL 91 (214)
T ss_pred hhhhhhhhHHHHHHHHHHhhcc--ccceeeecCCCC
Confidence 5779999999999988887654 677788887653
|
|
| >PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters | Back alignment and domain information |
|---|
Probab=85.15 E-value=2.9 Score=39.00 Aligned_cols=64 Identities=25% Similarity=0.350 Sum_probs=44.6
Q ss_pred CCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHh--CCC---ceeEEEEecCCcccc
Q 013862 11 IGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAAR--NPD---MDLVLILANPATSFR 74 (435)
Q Consensus 11 ~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~--~p~---~v~~lVli~~~~~~~ 74 (435)
.++.+.....++.+..++|-...+.+.++|+|-|.||.+++.+.+. +++ .=+++|+++|.....
T Consensus 170 ~~~~yPtQL~qlv~~Y~~Lv~~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 170 HGHKYPTQLRQLVATYDYLVESEGNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred CCCcCchHHHHHHHHHHHHHhccCCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 3445555666666666666533445789999999999999987653 211 236899999987654
|
In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved []. |
| >KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=83.40 E-value=26 Score=30.94 Aligned_cols=35 Identities=20% Similarity=0.075 Sum_probs=30.0
Q ss_pred CCEEEEEeChhHHHHHHHHHhCCC-ceeEEEEecCC
Q 013862 36 RPVYLVGESLGACLALAVAARNPD-MDLVLILANPA 70 (435)
Q Consensus 36 ~~~~lvGhS~Gg~va~~~a~~~p~-~v~~lVli~~~ 70 (435)
+-++++|.|-||+++-.++...++ .|..+|.++++
T Consensus 92 qGynivg~SQGglv~Raliq~cd~ppV~n~ISL~gP 127 (296)
T KOG2541|consen 92 QGYNIVGYSQGGLVARALIQFCDNPPVKNFISLGGP 127 (296)
T ss_pred CceEEEEEccccHHHHHHHHhCCCCCcceeEeccCC
Confidence 469999999999999999988765 58888888766
|
|
| >PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase | Back alignment and domain information |
|---|
Probab=83.29 E-value=1.8 Score=36.05 Aligned_cols=59 Identities=17% Similarity=0.297 Sum_probs=41.4
Q ss_pred cceEEEEeeCCCCCCCChhHHHHHHhh---CCC--ceEEEeCCCCccccccCc---hhHHHHHhhccccc
Q 013862 174 KAQTLILCSGRDQLLPSEEEGDRLCRA---LPN--CQTRRFGGGGHFLFLEDG---VDLVTTIKGAGYYR 235 (435)
Q Consensus 174 ~~Pvlii~G~~D~~~~~~~~~~~~~~~---~~~--~~~~~i~~~gH~~~~e~p---e~~~~~I~~~~Fl~ 235 (435)
+++.|-|-|+.|.++... +.....+. +|. ...++.+||||+-...-+ +++.-.|.+ |++
T Consensus 134 ~taLlTVEGe~DDIsg~G-QT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~--fi~ 200 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPG-QTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIRE--FIR 200 (202)
T ss_pred cceeEEeecCcccCCcch-HHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHH--HHH
Confidence 356777999999999987 45444444 443 256778899999877654 566666666 554
|
This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid. |
| >KOG2029 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=83.16 E-value=2.2 Score=41.61 Aligned_cols=55 Identities=18% Similarity=0.340 Sum_probs=33.8
Q ss_pred hHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHh-----CCC------ceeEEEEecCC
Q 013862 15 FTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAAR-----NPD------MDLVLILANPA 70 (435)
Q Consensus 15 ~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~-----~p~------~v~~lVli~~~ 70 (435)
+..-...+.+.+.+.+. ..+++++.+||||||.++=.+... .|+ ...++|+++.+
T Consensus 506 l~~Rs~~lleql~~~~V-G~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~P 571 (697)
T KOG2029|consen 506 LAARSNELLEQLQAAGV-GDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVP 571 (697)
T ss_pred HHHHHHHHHHHHHHhcc-CCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecC
Confidence 33333344444444444 235799999999999988665433 243 35677777655
|
|
| >PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE) | Back alignment and domain information |
|---|
Probab=82.34 E-value=4.3 Score=35.22 Aligned_cols=43 Identities=26% Similarity=0.296 Sum_probs=29.5
Q ss_pred CChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhC
Q 013862 13 HHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARN 57 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~ 57 (435)
.|.++=++.+.+.++.... .+++++++|+|.|+.++...+.+.
T Consensus 27 ~Sv~~G~~~L~~ai~~~~~--~~~~vvV~GySQGA~Va~~~~~~l 69 (225)
T PF08237_consen 27 ESVAEGVANLDAAIRAAIA--AGGPVVVFGYSQGAVVASNVLRRL 69 (225)
T ss_pred hHHHHHHHHHHHHHHhhcc--CCCCEEEEEECHHHHHHHHHHHHH
Confidence 4555555555555554221 357899999999999998877654
|
A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands []. |
| >COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=81.49 E-value=2.1 Score=39.75 Aligned_cols=46 Identities=26% Similarity=0.221 Sum_probs=37.2
Q ss_pred CChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCC
Q 013862 13 HHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNP 58 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p 58 (435)
-|.++.++|+..+++....+.+.+++.|+|+|+|+=+--..-.+.|
T Consensus 303 rtPe~~a~Dl~r~i~~y~~~w~~~~~~liGySfGADvlP~~~n~L~ 348 (456)
T COG3946 303 RTPEQIAADLSRLIRFYARRWGAKRVLLIGYSFGADVLPFAYNRLP 348 (456)
T ss_pred CCHHHHHHHHHHHHHHHHHhhCcceEEEEeecccchhhHHHHHhCC
Confidence 3789999999999999887667789999999999887655444443
|
|
| >PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ] | Back alignment and domain information |
|---|
Probab=80.53 E-value=2.9 Score=40.86 Aligned_cols=54 Identities=20% Similarity=0.200 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcc
Q 013862 18 LLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATS 72 (435)
Q Consensus 18 ~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~ 72 (435)
++.--+++++..--. +.+.-+..|.|-||..++..|++||+..+++|.-+|+..
T Consensus 98 ~~~~aK~l~~~~Yg~-~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~~ 151 (474)
T PF07519_consen 98 TTVVAKALIEAFYGK-APKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAIN 151 (474)
T ss_pred HHHHHHHHHHHHhCC-CCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchHH
Confidence 333334444444222 235688999999999999999999999999999988854
|
It also includes several bacterial homologues of unknown function. |
| >COG4947 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=80.03 E-value=1.9 Score=34.91 Aligned_cols=36 Identities=22% Similarity=0.220 Sum_probs=32.3
Q ss_pred CCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCc
Q 013862 36 RPVYLVGESLGACLALAVAARNPDMDLVLILANPAT 71 (435)
Q Consensus 36 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~ 71 (435)
...++-|.||||+.|..+.-+||+...++|.+++..
T Consensus 101 gs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvY 136 (227)
T COG4947 101 GSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVY 136 (227)
T ss_pred CCccccccchhhhhhhhhheeChhHhhhheeeccee
Confidence 356688999999999999999999999999988774
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 435 | |||
| 2wue_A | 291 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas | 2e-12 | |
| 2y6u_A | 398 | Peroxisomal membrane protein LPX1; hydrolase, puta | 3e-12 | |
| 1iup_A | 282 | META-cleavage product hydrolase; aromatic compound | 3e-12 | |
| 1c4x_A | 285 | BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di | 3e-12 | |
| 1j1i_A | 296 | META cleavage compound hydrolase; carbazole degrad | 1e-11 | |
| 2puj_A | 286 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; | 1e-11 | |
| 1u2e_A | 289 | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | 3e-11 | |
| 3fsg_A | 272 | Alpha/beta superfamily hydrolase; PF00561, MCSG, P | 6e-11 | |
| 2r11_A | 306 | Carboxylesterase NP; 2632844, putative hydrolase, | 1e-10 | |
| 2ocg_A | 254 | Valacyclovir hydrolase; alpha beta hydrolase fold; | 3e-09 | |
| 1m33_A | 258 | BIOH protein; alpha-betta-alpha sandwich, structur | 3e-09 | |
| 3nwo_A | 330 | PIP, proline iminopeptidase; structural genomics, | 6e-09 | |
| 3dkr_A | 251 | Esterase D; alpha beta hydrolase, mechanism, catal | 1e-08 | |
| 3r0v_A | 262 | Alpha/beta hydrolase fold protein; structural geno | 1e-08 | |
| 3v48_A | 268 | Aminohydrolase, putative aminoacrylate hydrolase R | 2e-08 | |
| 1hkh_A | 279 | Gamma lactamase; hydrolase, alpha/beta hydrolase, | 2e-08 | |
| 3oos_A | 278 | Alpha/beta hydrolase family protein; APC67239.0, p | 3e-08 | |
| 3kxp_A | 314 | Alpha-(N-acetylaminomethylene)succinic acid hydrol | 1e-07 | |
| 1q0r_A | 298 | RDMC, aclacinomycin methylesterase; anthracycline, | 1e-07 | |
| 3qvm_A | 282 | OLEI00960; structural genomics, PSI-biology, midwe | 2e-07 | |
| 3l80_A | 292 | Putative uncharacterized protein SMU.1393C; alpha/ | 2e-07 | |
| 1a8s_A | 273 | Chloroperoxidase F; haloperoxidase, oxidoreductase | 2e-07 | |
| 4f0j_A | 315 | Probable hydrolytic enzyme; alpha/beta hydrolase f | 3e-07 | |
| 3hss_A | 293 | Putative bromoperoxidase; alpha beta hydrolase, ox | 3e-07 | |
| 3e0x_A | 245 | Lipase-esterase related protein; APC60309, clostri | 4e-07 | |
| 1zoi_A | 276 | Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo | 6e-07 | |
| 1wom_A | 271 | RSBQ, sigma factor SIGB regulation protein RSBQ; a | 6e-07 | |
| 1tqh_A | 247 | Carboxylesterase precursor; tetrahedral intermedia | 1e-06 | |
| 2xmz_A | 269 | Hydrolase, alpha/beta hydrolase fold family; menaq | 1e-06 | |
| 1brt_A | 277 | Bromoperoxidase A2; haloperoxidase, oxidoreductase | 1e-06 | |
| 3ia2_A | 271 | Arylesterase; alpha-beta hydrolase fold, transitio | 1e-06 | |
| 3pfb_A | 270 | Cinnamoyl esterase; alpha/beta hydrolase fold, hyd | 1e-06 | |
| 3vdx_A | 456 | Designed 16NM tetrahedral protein CAGE containing | 2e-06 | |
| 3rm3_A | 270 | MGLP, thermostable monoacylglycerol lipase; alpha/ | 3e-06 | |
| 3fob_A | 281 | Bromoperoxidase; structural genomics, IDP00046, ba | 5e-06 | |
| 1a8q_A | 274 | Bromoperoxidase A1; haloperoxidase, oxidoreductase | 5e-06 | |
| 3bf7_A | 255 | Esterase YBFF; thioesterase, helical CAP, hydrolas | 7e-06 | |
| 1mtz_A | 293 | Proline iminopeptidase; alpha-beta hydrolase, CAP | 7e-06 | |
| 3g9x_A | 299 | Haloalkane dehalogenase; alpha/beta hydrolase, hel | 1e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-05 | |
| 1a88_A | 275 | Chloroperoxidase L; haloperoxidase, oxidoreductase | 4e-05 | |
| 3afi_E | 316 | Haloalkane dehalogenase; A/B-hydrolase, hydrolase; | 2e-04 | |
| 3p2m_A | 330 | Possible hydrolase; alpha/beta hydrolase superfami | 2e-04 | |
| 3bwx_A | 285 | Alpha/beta hydrolase; YP_496220.1, joint center fo | 4e-04 | |
| 3om8_A | 266 | Probable hydrolase; structural genomics, PSI-2, pr | 4e-04 | |
| 1b6g_A | 310 | Haloalkane dehalogenase; hydrolase, alpha/beta-hyd | 8e-04 |
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A Length = 291 | Back alignment and structure |
|---|
Score = 66.2 bits (162), Expect = 2e-12
Identities = 34/189 (17%), Positives = 60/189 (31%), Gaps = 25/189 (13%)
Query: 37 PVYLVGESLGACLALAVAARNPDMDLV--LILANPATSFRKSLLQTIMPIPAELMSGQMT 94
V LVG +LG A+ A P L+L P L +
Sbjct: 107 RVPLVGNALGGGTAVRFALDYP--ARAGRLVLMGPGGLSINLFAPDPTEGVKRLSKFSVA 164
Query: 95 LTLSYL---LSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKET 151
T L L ++ D + +V F ++ E AM A +
Sbjct: 165 PTRENLEAFLRVMVYDK-NLITPELVDQRFALASTPESLTATRAM---GKSFAGADFEAG 220
Query: 152 LLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGG 211
++W + ++ L++ D++ P + + +P Q FG
Sbjct: 221 MMW-------------REVYRLRQPVLLIWGREDRVNPL-DGALVALKTIPRAQLHVFGQ 266
Query: 212 GGHFLFLED 220
GH++ +E
Sbjct: 267 CGHWVQVEK 275
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* Length = 398 | Back alignment and structure |
|---|
Score = 67.1 bits (163), Expect = 3e-12
Identities = 36/212 (16%), Positives = 71/212 (33%), Gaps = 12/212 (5%)
Query: 18 LLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSL 77
+LK+ + S + S ++G S+G ALA P++ +LIL P RK++
Sbjct: 121 VLKIATCELGSID--SHPALNVVIGHSMGGFQALACDVLQPNLFHLLILIEPVVITRKAI 178
Query: 78 LQTIMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMS 137
+P + L S L + ++ + + +
Sbjct: 179 GAGRPGLPPDSPQIPENLYNSLRLKTCDHFANESEYVKYMRNGSFFTNAHSQILQNIIDF 238
Query: 138 SYLPVLANILPKETLLWKLELLKSASAYAN---------ARLDAVKAQTLILCSGRDQLL 188
+ + K+E ++ Y N + + V+ +T+ + R
Sbjct: 239 ERTKASGDDEDGGPVRTKMEQAQNLLCYMNMQTFAPFLISNVKFVRKRTIHIVGARSNWC 298
Query: 189 PSEEEGDRLCRALPNCQTRRFGGGGHFLFLED 220
P + L + L N GG H + +E
Sbjct: 299 P-PQNQLFLQKTLQNYHLDVIPGGSHLVNVEA 329
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A Length = 282 | Back alignment and structure |
|---|
Score = 65.8 bits (161), Expect = 3e-12
Identities = 33/185 (17%), Positives = 64/185 (34%), Gaps = 23/185 (12%)
Query: 37 PVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTL- 95
++VG + G LA+A A R + ++L A + + ++
Sbjct: 96 KAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAG-----TRFDVTEGLNAVWGYTPSIE 150
Query: 96 TLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWK 155
+ LL + D + D + + + S + F +M
Sbjct: 151 NMRNLLDIFAYDR-SLVTDELARLRYEASIQPGFQESFSSM---------------FPEP 194
Query: 156 LELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHF 215
+ A A ++ + + +TLI+ DQ++P RL + Q FG GH+
Sbjct: 195 RQRWIDALASSDEDIKTLPNETLIIHGREDQVVPL-SSSLRLGELIDRAQLHVFGRCGHW 253
Query: 216 LFLED 220
+E
Sbjct: 254 TQIEQ 258
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 Length = 285 | Back alignment and structure |
|---|
Score = 65.8 bits (161), Expect = 3e-12
Identities = 26/188 (13%), Positives = 58/188 (30%), Gaps = 23/188 (12%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTL 95
++VG S+G + L + P+ + L P ++
Sbjct: 103 EKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSV------------GAPMNARPPELAR 150
Query: 96 TLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAM---SSYLPVLANILPKETL 152
L++ DP ++ ++ V + P + I E +
Sbjct: 151 LLAFY-----ADPRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQ--EVM 203
Query: 153 LWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGG 212
++ + A L + L+ +D+++P + L + L + +
Sbjct: 204 FESMKAGMESLVIPPATLGRLPHDVLVFHGRQDRIVPL-DTSLYLTKHLKHAELVVLDRC 262
Query: 213 GHFLFLED 220
GH+ LE
Sbjct: 263 GHWAQLER 270
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 Length = 296 | Back alignment and structure |
|---|
Score = 64.3 bits (157), Expect = 1e-11
Identities = 30/186 (16%), Positives = 67/186 (36%), Gaps = 25/186 (13%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTL 95
V +VG S+G L V+ + ++ L+L A L+ I +++ T
Sbjct: 106 GKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSA-----GLVVEIHEDLRPIINYDFTR 160
Query: 96 -TLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLW 154
+ +L+ LT D D+++ + +T + + +VA ++ +
Sbjct: 161 EGMVHLVKALTNDG-FKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDP---- 215
Query: 155 KLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGH 214
+ V+ TL++ D+++P E + + + GH
Sbjct: 216 -------------EFIRKVQVPTLVVQGKDDKVVPV-ETAYKFLDLIDDSWGYIIPHCGH 261
Query: 215 FLFLED 220
+ +E
Sbjct: 262 WAMIEH 267
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A Length = 286 | Back alignment and structure |
|---|
Score = 64.3 bits (157), Expect = 1e-11
Identities = 36/190 (18%), Positives = 62/190 (32%), Gaps = 27/190 (14%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLV--LILANPATSFRKSLLQTIMPIPAELMSGQM 93
+LVG ++G AL A P D + LIL P M L
Sbjct: 104 DRAHLVGNAMGGATALNFALEYP--DRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYA 161
Query: 94 TLTLSYL---LSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKE 150
+ L L + D + + ++ Q R + +L +
Sbjct: 162 EPSYETLKQMLQVFLYDQ-SLITEELL---------QGRWEAIQRQPEHL---------K 202
Query: 151 TLLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFG 210
L + ++ ARL +KA+T I D+ +P + G +L + + + F
Sbjct: 203 NFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPL-DHGLKLLWNIDDARLHVFS 261
Query: 211 GGGHFLFLED 220
G + E
Sbjct: 262 KCGAWAQWEH 271
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} Length = 289 | Back alignment and structure |
|---|
Score = 62.7 bits (153), Expect = 3e-11
Identities = 35/190 (18%), Positives = 63/190 (33%), Gaps = 27/190 (14%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLV--LILANPATSFRKSLLQTIMPIPAELMSGQM 93
++L+G S+G ++A + P + V L+L T L
Sbjct: 107 AKIHLLGNSMGGHSSVAFTLKWP--ERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYR 164
Query: 94 TLTLSYL---LSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKE 150
T+ L + + D D++ + R + ++ +L L
Sbjct: 165 QPTIENLKLMMDIFVFDT-SDLTDALF---------EARLNNMLSRRDHLENFVKSLEAN 214
Query: 151 TLLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFG 210
+ RL +KAQTLI+ D+ +P + G RL + + F
Sbjct: 215 PKQFPD---------FGPRLAEIKAQTLIVWGRNDRFVPM-DAGLRLLSGIAGSELHIFR 264
Query: 211 GGGHFLFLED 220
GH+ E
Sbjct: 265 DCGHWAQWEH 274
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} Length = 272 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 6e-11
Identities = 27/183 (14%), Positives = 58/183 (31%), Gaps = 20/183 (10%)
Query: 37 PVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTLT 96
L G S G LA A+A D L + L P + S + + ++ +
Sbjct: 90 RFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHS--KRLTGKHINILEEDINPV 147
Query: 97 LSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKL 156
+ + D + + + + Q+ + +T + +L
Sbjct: 148 EN----------KEYFADFLSMNVIINNQAWHDYQNLIIP-------GLQKEDKTFIDQL 190
Query: 157 ELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFL 216
+ S + + + I+ DQ++ +E +L N + GH L
Sbjct: 191 QNNYSFTFEEKLKNINYQFPFKIMVGRNDQVVGY-QEQLKLINHNENGEIVLLNRTGHNL 249
Query: 217 FLE 219
++
Sbjct: 250 MID 252
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} Length = 306 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 1e-10
Identities = 22/187 (11%), Positives = 50/187 (26%), Gaps = 32/187 (17%)
Query: 37 PVYLVGESLGACLALAVAARNPDMDLVLILANPATSF---RKSLLQTIMPIPAELMSGQM 93
+++G SLG + R P+ + +PA +F + + + A
Sbjct: 135 KSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETFLPFHHDFYKYALGLTASN----- 189
Query: 94 TLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLL 153
+ L+ + D + + + P
Sbjct: 190 --GVETFLNWMMNDQNVLHPI-------FVKQFKAGVMWQDGSRNPNPNADGF------- 233
Query: 154 WKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGG 213
+ + L + + L+L + + R +P+ + G
Sbjct: 234 --------PYVFTDEELRSARVPILLLLGEHEVIYDPHSALHRASSFVPDIEAEVIKNAG 285
Query: 214 HFLFLED 220
H L +E
Sbjct: 286 HVLSMEQ 292
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A Length = 254 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 3e-09
Identities = 25/187 (13%), Positives = 52/187 (27%), Gaps = 41/187 (21%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLV--LILANPATSFRKSLLQTIMPIPAELMSGQM 93
+ V L+G S G AL AA+ P + +++ + M +
Sbjct: 94 KKVSLLGWSDGGITALIAAAKYPS--YIHKMVIWGANAYVT----------DEDSMIYEG 141
Query: 94 TLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLL 153
+S + + ++++ + T ++
Sbjct: 142 IRDVSKWS-----ERTRKPLEALYGYDYFARTCEKWVDGIRQFKH--------------- 181
Query: 154 WKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGG 213
L V+ LI+ +D L+P D + + + + G
Sbjct: 182 ------LPDGNICRHLLPRVQCPALIVHGEKDPLVP-RFHADFIHKHVKGSRLHLMPEGK 234
Query: 214 HFLFLED 220
H L L
Sbjct: 235 HNLHLRF 241
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 Length = 258 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 3e-09
Identities = 34/186 (18%), Positives = 61/186 (32%), Gaps = 21/186 (11%)
Query: 37 PVYLVGESLGACLALAVAARNPDMDLV--LILANPATSFRKSLLQTIMPIPAELMSGQMT 94
+G SLG +A +A +P+ V L+ + F + G
Sbjct: 75 KAIWLGWSLGGLVASQIALTHPE--RVRALVTVASSPCF----------SARDEWPGIKP 122
Query: 95 LTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLW 154
L+ L+ D + + T ++ ++ LP+ + L
Sbjct: 123 DVLAGFQQQLSDDQQRTVERFLALQTMGTETARQDARALKKTVLALPMP----EVDVLNG 178
Query: 155 KLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGH 214
LE+LK+ L V L L D L+P + L + P+ ++ F H
Sbjct: 179 GLEILKTVDLRQ--PLQNVSMPFLRLYGYLDGLVPRKV-VPMLDKLWPHSESYIFAKAAH 235
Query: 215 FLFLED 220
F+
Sbjct: 236 APFISH 241
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} Length = 330 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 6e-09
Identities = 35/187 (18%), Positives = 63/187 (33%), Gaps = 11/187 (5%)
Query: 38 VYLVGESLGACLALAVAARNPDMDLVLILANPATS---FRKSLLQTIMPIPAELMSGQMT 94
+++G+S G L +A R P + L + N S + ++ +PAE +
Sbjct: 128 YHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPASMRLWSEAAGDLRAQLPAET---RAA 184
Query: 95 LTLSYLLSLLTGDPLKMAMDSIVKGLFLQ-STIQERSQDFVAMSSYLPVLANILPKETLL 153
L +T A + + + D VA P + + +
Sbjct: 185 LDRHEAAGTITHPDYLQAAAEFYRRHVCRVVPTPQDFADSVAQMEAEPTVYHTMNGPNEF 244
Query: 154 WKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGG 213
+ L S RL V A L++ D+ P + +P+ ++ F G
Sbjct: 245 HVVGTLGDWSV--IDRLPDVTAPVLVIAGEHDEATP--KTWQPFVDHIPDVRSHVFPGTS 300
Query: 214 HFLFLED 220
H LE
Sbjct: 301 HCTHLEK 307
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A Length = 251 | Back alignment and structure |
|---|
Score = 54.5 bits (131), Expect = 1e-08
Identities = 28/197 (14%), Positives = 58/197 (29%), Gaps = 51/197 (25%)
Query: 32 RSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSG 91
+ V++ G SLG A+ P + + ++P + L+ + +
Sbjct: 89 TAKYAKVFVFGLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHLVPGFLKYAEYMNR- 147
Query: 92 QMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKET 151
+ +S + + +YLP
Sbjct: 148 ----------------------------------LAGKSDESTQILAYLP---------- 163
Query: 152 LLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRR--- 208
+L + + A L+ VK T I +G+D+L+ +L AL N
Sbjct: 164 --GQLAAIDQFATTVAADLNLVKQPTFIGQAGQDELVDG-RLAYQLRDALINAARVDFHW 220
Query: 209 FGGGGHFLFLEDGVDLV 225
+ H + + +
Sbjct: 221 YDDAKHVITVNSAHHAL 237
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} Length = 262 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 1e-08
Identities = 29/179 (16%), Positives = 53/179 (29%), Gaps = 20/179 (11%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTL 95
++ G S GA L+L AA + + + P + + P+P + +
Sbjct: 87 GAAFVFGMSSGAGLSLLAAASGLPITRLAVFEPPYA-----VDDSRPPVPPDYQTR---- 137
Query: 96 TLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWK 155
L +LL A+ + D VA P+ + L
Sbjct: 138 ----LDALLAEGRRGDAVTYFMTEGV------GVPPDLVAQMQQAPMWPGMEAVAHTLPY 187
Query: 156 LELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGH 214
+ + AR ++ TL++ G L +PN + H
Sbjct: 188 DHAVMGDNTIPTARFASISIPTLVMDGGASPAWIRHT-AQELADTIPNARYVTLENQTH 245
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} Length = 268 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 2e-08
Identities = 41/185 (22%), Positives = 63/185 (34%), Gaps = 21/185 (11%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTL 95
+VG +LGA + + +A P VLI N + L SG
Sbjct: 82 EHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQA 141
Query: 96 TLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWK 155
+ ++ L+ + R+ A LA+ K LL +
Sbjct: 142 WV----------------EAQPLFLYPADWMAARAPRLEAED--ALALAHFQGKNNLLRR 183
Query: 156 LELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHF 215
L LK A D ++ I+C+ D L+P+ L ALP+ Q GGH
Sbjct: 184 LNALKRADFS--HHADRIRCPVQIICASDDLLVPT-ACSSELHAALPDSQKMVMPYGGHA 240
Query: 216 LFLED 220
+ D
Sbjct: 241 CNVTD 245
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* Length = 279 | Back alignment and structure |
|---|
Score = 54.0 bits (130), Expect = 2e-08
Identities = 38/190 (20%), Positives = 61/190 (32%), Gaps = 19/190 (10%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLV--LILANPATSFRKSLLQTIMPIPAELMSGQM 93
R V LVG S+G AR + V L F +P E+ G
Sbjct: 90 RDVVLVGFSMGTGELARYVARYGH-ERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDG-- 146
Query: 94 TLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLL 153
+ + GD D L + R + S+ + + P
Sbjct: 147 ------IEAAAKGDRFAWFTDFYKNFYNLDENLGSRISEQAVTGSWNVAIGSA-PVAAY- 198
Query: 154 WKLELLKSASAYANARLDAVKAQ---TLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFG 210
++ + + ++AV+A TLIL +D +LP + R +A+P
Sbjct: 199 ---AVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQAVPEADYVEVE 255
Query: 211 GGGHFLFLED 220
G H L
Sbjct: 256 GAPHGLLWTH 265
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} Length = 278 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 3e-08
Identities = 29/190 (15%), Positives = 63/190 (33%), Gaps = 25/190 (13%)
Query: 38 VYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTLTL 97
G S G LAL A + +I+ A S + + + + ++ +
Sbjct: 93 WGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSIYCSKNVKFNRI---V 149
Query: 98 SYLLSLLTGDPLKMAMDSIVKGLFLQSTI-QERSQDFVAMSSYLPVLA-------NILPK 149
S + +L ++ ++ + L S +E+ ++ + + + + + K
Sbjct: 150 SIMNALNDDSTVQEERKALSREWALMSFYSEEKLEEALKLPNSGKTVGNRLNYFRQVEYK 209
Query: 150 ETLLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRF 209
+ + +L VK + I C D P + +PN +F
Sbjct: 210 DYDVR-------------QKLKFVKIPSFIYCGKHDVQCP-YIFSCEIANLIPNATLTKF 255
Query: 210 GGGGHFLFLE 219
H F+E
Sbjct: 256 EESNHNPFVE 265
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} Length = 314 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 1e-07
Identities = 27/187 (14%), Positives = 51/187 (27%), Gaps = 22/187 (11%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLV--LILANPATSFRKSLLQTIMPIPAELMSGQM 93
LVG SLGA ++ AA+ PD LV ++ + I E +
Sbjct: 134 GHAILVGHSLGARNSVTAAAKYPD--LVRSVVAIDFTP-----------YIETEALDALE 180
Query: 94 TLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLL 153
+ ++ + + + + + L LA+
Sbjct: 181 ARVNAGSQLFEDIKAVEAYLAGRYPNIPADAIRIRAESGYQPVDGGLRPLASSAAMAQTA 240
Query: 154 WKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGG 213
L + V LI+ +L+ + R P+ G
Sbjct: 241 RGLR------SDLVPAYRDVTKPVLIVRGESSKLVS-AAALAKTSRLRPDLPVVVVPGAD 293
Query: 214 HFLFLED 220
H++
Sbjct: 294 HYVNEVS 300
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* Length = 298 | Back alignment and structure |
|---|
Score = 52.2 bits (125), Expect = 1e-07
Identities = 33/192 (17%), Positives = 57/192 (29%), Gaps = 10/192 (5%)
Query: 36 RPVYLVGESLGACLALAVAARNPD--MDLVLILANPATSFRKSLLQTIMPIPAELMSGQM 93
++VG S+GA + +A + D L ++L + ++ +M L
Sbjct: 94 DRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPG 153
Query: 94 TLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANI-----LP 148
L P + + K + + F I +
Sbjct: 154 PQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVL 213
Query: 149 KETLLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRR 208
E L S A L V TL++ + D + P+ G L +P +
Sbjct: 214 AEPYAHYSLTLPPPSRA--AELREVTVPTLVIQAEHDPIAPA-PHGKHLAGLIPTARLAE 270
Query: 209 FGGGGHFLFLED 220
G GH L
Sbjct: 271 IPGMGHALPSSV 282
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} Length = 282 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 2e-07
Identities = 32/188 (17%), Positives = 59/188 (31%), Gaps = 27/188 (14%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTL 95
V ++G S+ + +A + D + + P+ F M P + + G
Sbjct: 98 VNVSIIGHSVSSIIAGIASTHVGDRISDITMICPSPCF--------MNFPPDYVGGFERD 149
Query: 96 TLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWK 155
L L++L+ + + A + + S E + +
Sbjct: 150 DLEELINLMDKNYIGWANY-LAPLVMGASHSSELIGELSGSFCTTDPIV----------- 197
Query: 156 LELLKSASAYAN----ARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGG 211
A A + L+ + LI S +D L E G + +PN Q
Sbjct: 198 --AKTFAKATFFSDYRSLLEDISTPALIFQSAKDSLAS-PEVGQYMAENIPNSQLELIQA 254
Query: 212 GGHFLFLE 219
GH L +
Sbjct: 255 EGHCLHMT 262
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} Length = 292 | Back alignment and structure |
|---|
Score = 51.5 bits (123), Expect = 2e-07
Identities = 23/183 (12%), Positives = 47/183 (25%), Gaps = 20/183 (10%)
Query: 37 PVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTLT 96
L S+G AL + ++ L I P T+M A S
Sbjct: 111 SYLLCVHSIGGFAALQIMNQSSKACLGFIGLEPT---------TVMIYRAGFSSDLYPQL 161
Query: 97 LSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKL 156
L T + + + F ++ + + L + + L
Sbjct: 162 ALRRQKLKTAADRLNYLKDLSRSHFSSQQFKQLWRGYDYCQRQLNDVQS-------LPDF 214
Query: 157 ELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFL 216
++ + + K +++ + E E + G H+L
Sbjct: 215 KIRLALGEEDFKTGISEKIPSIVFSESFREKEYLESE---YLNKHTQTKL-ILCGQHHYL 270
Query: 217 FLE 219
Sbjct: 271 HWS 273
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 Length = 273 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 2e-07
Identities = 29/189 (15%), Positives = 48/189 (25%), Gaps = 19/189 (10%)
Query: 36 RPVYLVGESLGACLALAVAAR-NPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMT 94
R L G S G R L + +P E+ G
Sbjct: 86 RDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPMEVFDG--- 142
Query: 95 LTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTI--QERSQDFVAMSSYLPVLANILPKETL 152
+ D ++ D + G F + S V
Sbjct: 143 -----IRQASLADRSQLYKD-LASGPFFGFNQPGAKSSAGMVDW------FWLQGMAAGH 190
Query: 153 LWKLELLKSASAY-ANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGG 211
+ +K+ S L + TL++ DQ++P E G + + + G
Sbjct: 191 KNAYDCIKAFSETDFTEDLKKIDVPTLVVHGDADQVVPIEASGIASAALVKGSTLKIYSG 250
Query: 212 GGHFLFLED 220
H L
Sbjct: 251 APHGLTDTH 259
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} Length = 315 | Back alignment and structure |
|---|
Score = 51.0 bits (122), Expect = 3e-07
Identities = 30/206 (14%), Positives = 57/206 (27%), Gaps = 41/206 (19%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTL 95
++G S+G LA A P L+L NP + G
Sbjct: 114 ARASVIGHSMGGMLATRYALLYPRQVERLVLVNPI------------GLEDWKALGVPWR 161
Query: 96 TLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWK 155
++ L+ + + I + E +F + +E++ W
Sbjct: 162 SVDDWYRRD----LQTSAEGIRQYQQATYYAGEWRPEFDRWVQMQAGMYRGKGRESVAWN 217
Query: 156 LELLKSASAYAN------ARLDAVKAQTLILCSGRDQLLPSE---------------EEG 194
+ + LD ++ TL+L +D + + G
Sbjct: 218 S----ALTYDMIFTQPVVYELDRLQMPTLLLIGEKDNTAIGKDAAPAELKARLGNYAQLG 273
Query: 195 DRLCRALPNCQTRRFGGGGHFLFLED 220
R +P F GH ++
Sbjct: 274 KDAARRIPQATLVEFPDLGHTPQIQA 299
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A Length = 293 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 3e-07
Identities = 31/184 (16%), Positives = 56/184 (30%), Gaps = 18/184 (9%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTL 95
P +VG S+GA +A + P++ +L + +
Sbjct: 110 APARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRL---------DRARQFFNKAEAE 160
Query: 96 TLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWK 155
+ L + + L D++AM S P+ L +
Sbjct: 161 LYDSGVQLPPTYDARARLLENFSRKTLND--DVAVGDWIAMFSMWPIK----STPGLRCQ 214
Query: 156 LELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHF 215
L+ + + A L++ D + P G + ALPN + + GH
Sbjct: 215 LDCAPQTNRLP--AYRNIAAPVLVIGFADDVVTP-PYLGREVADALPNGRYLQIPDAGHL 271
Query: 216 LFLE 219
F E
Sbjct: 272 GFFE 275
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} Length = 245 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 4e-07
Identities = 25/187 (13%), Positives = 54/187 (28%), Gaps = 41/187 (21%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLV--LILANPATSFRKSLLQTIMPIPAELMSGQM 93
+ + L+G S+G + L VA + V ++ + F + + M
Sbjct: 84 KNITLIGYSMGGAIVLGVALKKLP--NVRKVVSLSGGARF--------DKLDKDFMEKIY 133
Query: 94 TLTLS-YLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETL 152
L L G + + L+ D +A +++
Sbjct: 134 HNQLDNNYLLECIGGIDNPLSEKYFE--TLEKDPDIMINDLIACKLI-----DLVD---- 182
Query: 153 LWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGG 212
L + + + + L E + + + + N + + F G
Sbjct: 183 ----------------NLKNIDIPVKAIVAKDELLTL-VEYSEIIKKEVENSELKIFETG 225
Query: 213 GHFLFLE 219
HFL +
Sbjct: 226 KHFLLVV 232
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A Length = 276 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 6e-07
Identities = 32/199 (16%), Positives = 61/199 (30%), Gaps = 41/199 (20%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLV--LILANPATSFRKSLLQTIMPIPAELMSGQM 93
+ VG S G + AR+P+ D V +L +P + G
Sbjct: 89 QGAVHVGHSTGGGEVVRYMARHPE-DKVAKAVLIAAVPPLMVQTPGNPGGLPKSVFDG-- 145
Query: 94 TLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTI--QERSQDFVAMSSYLPVLANILPKET 151
+ + + + + G F E S+ +
Sbjct: 146 ------FQAQVASNRAQF-YRDVPAGPFYGYNRPGVEASEGIIGNW-------------- 184
Query: 152 LLWKLELLKSASAYANA-----------RLDAVKAQTLILCSGRDQLLPSEEEGDRLCRA 200
W+ ++ SA A+ + L ++ L++ DQ++P E G +
Sbjct: 185 --WRQGMIGSAKAHYDGIVAFSQTDFTEDLKGIQQPVLVMHGDDDQIVPYENSGVLSAKL 242
Query: 201 LPNCQTRRFGGGGHFLFLE 219
LPN + + G H +
Sbjct: 243 LPNGALKTYKGYPHGMPTT 261
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* Length = 271 | Back alignment and structure |
|---|
Score = 49.5 bits (119), Expect = 6e-07
Identities = 31/190 (16%), Positives = 61/190 (32%), Gaps = 31/190 (16%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLV--LILANPATSFRKSLLQTIMPIPAELMSGQM 93
+ VG S+GA + + + R P +L L++ P+ + + E + G
Sbjct: 90 KETVFVGHSVGALIGMLASIRRP--ELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLG-- 145
Query: 94 TLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLL 153
LL ++ + + A + Q E ++ + +
Sbjct: 146 ------LLEMMEKNYIGWA-TVFAATVLNQPDRPEIKEELESRFCSTDPVI--------- 189
Query: 154 WKLELLKSASAYAN----ARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRF 209
+ A A L V +LIL D + P+ G + + LP ++
Sbjct: 190 ----ARQFAKAAFFSDHREDLSKVTVPSLILQCADDIIAPA-TVGKYMHQHLPYSSLKQM 244
Query: 210 GGGGHFLFLE 219
GH +
Sbjct: 245 EARGHCPHMS 254
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A Length = 247 | Back alignment and structure |
|---|
Score = 49.0 bits (117), Expect = 1e-06
Identities = 27/196 (13%), Positives = 60/196 (30%), Gaps = 45/196 (22%)
Query: 32 RSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSG 91
+ + G SLG +L + P +V + A +++ + +
Sbjct: 82 NKGYEKIAVAGLSLGGVFSLKLGYTVPIEGIVTMCAPMYIKSEETMYEGV---------- 131
Query: 92 QMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKET 151
L Y + ++ Q+ P +T
Sbjct: 132 -----LEYAREYKKREGKS---------------EEQIEQEMEKFKQT--------PMKT 163
Query: 152 LLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRAL--PNCQTRRF 209
L L+ A LD + A T ++ + D+++ + + + + P Q + +
Sbjct: 164 LKA----LQELIADVRDHLDLIYAPTFVVQARHDEMINP-DSANIIYNEIESPVKQIKWY 218
Query: 210 GGGGHFLFLEDGVDLV 225
GH + L+ D +
Sbjct: 219 EQSGHVITLDQEKDQL 234
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} Length = 269 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 1e-06
Identities = 32/188 (17%), Positives = 65/188 (34%), Gaps = 22/188 (11%)
Query: 36 RPVYLVGESLGACLALAVAARNPDM--DLVLILANPATSFRKSLLQTIMPIPAELMSGQM 93
+ + L G S+G +AL A +L+L +P + L+ + A
Sbjct: 83 KSITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKEEANQLERRLVDDA------- 135
Query: 94 TLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLL 153
+L +++ ++ K QS ++ + + L+ +
Sbjct: 136 ------RAKVLDIAGIELFVNDWEKLPLFQSQLELPVEIQHQIRQQR--LSQ--SPHKMA 185
Query: 154 WKLELLKSAS-AYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGG 212
L + RL +K TLIL D+ + ++ +PN + +
Sbjct: 186 KALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKFV--QIAKKMANLIPNSKCKLISAT 243
Query: 213 GHFLFLED 220
GH + +ED
Sbjct: 244 GHTIHVED 251
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A Length = 277 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 1e-06
Identities = 31/189 (16%), Positives = 51/189 (26%), Gaps = 19/189 (10%)
Query: 36 RPVYLVGESLGACLALAVAAR-NPDM--DLVLILANPATSFRKSLLQTIMPIPAELMSGQ 92
+ LVG S G + + + A+ K+ P E G
Sbjct: 90 QDAVLVGFSTGTGEVARYVSSYGTARIAKVAFL-ASLEPFLLKTDDNPDGAAPQEFFDG- 147
Query: 93 MTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQER-SQDFVAMSSYLPVLANILPKET 151
+++ + D L + R S++ V S N
Sbjct: 148 -------IVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNS------WNTAASGG 194
Query: 152 LLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGG 211
+ A + + LIL D+ LP E +ALP+ + G
Sbjct: 195 FFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEG 254
Query: 212 GGHFLFLED 220
H L
Sbjct: 255 APHGLLWTH 263
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} PDB: 1va4_A 3hi4_A 3hea_A Length = 271 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 1e-06
Identities = 30/197 (15%), Positives = 55/197 (27%), Gaps = 37/197 (18%)
Query: 36 RPVYLVGESLG-ACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMT 94
+ V LVG S+G +A +A L+L T + G
Sbjct: 86 KEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPL--------FGQKPDYPQGVPL 137
Query: 95 LTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLW 154
+ + L D + D + + Q SQ
Sbjct: 138 DVFARFKTELLKDRAQFISD-FNAPFYGINKGQVVSQGVQTQ----------------TL 180
Query: 155 KLELLKSASAYANA-----------RLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPN 203
++ LL S A + + + TL++ DQ++P E G +
Sbjct: 181 QIALLASLKATVDCVTAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIKG 240
Query: 204 CQTRRFGGGGHFLFLED 220
+ + + H +
Sbjct: 241 AELKVYKDAPHGFAVTH 257
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* Length = 270 | Back alignment and structure |
|---|
Score = 48.6 bits (116), Expect = 1e-06
Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 8/98 (8%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMP--------IPAE 87
R +YLVG + G +A +A PD+ ++L PA + + L+ IP
Sbjct: 119 RNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAATLKGDALEGNTQGVTYNPDHIPDR 178
Query: 88 LMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQST 125
L +TL YL +++ + T
Sbjct: 179 LPFKDLTLGGFYLRIAQQLPIYEVSAQFTKPVCLIHGT 216
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A Length = 456 | Back alignment and structure |
|---|
Score = 49.0 bits (117), Expect = 2e-06
Identities = 32/188 (17%), Positives = 52/188 (27%), Gaps = 17/188 (9%)
Query: 36 RPVYLVGESLGACL-ALAVAARNPDMDLVLILANPAT-SFRKSLLQTIMPIPAELMSGQM 93
+ LVG S+G A V++ + K+ P E G
Sbjct: 91 QDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTDDNPDGAAPQEFFDG-- 148
Query: 94 TLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQER-SQDFVAMSSYLPVLANILPKETL 152
+++ + D L + R S++ V S N
Sbjct: 149 ------IVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNS------WNTAASGGF 196
Query: 153 LWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGG 212
+ A + + LIL D+ LP E +ALP+ + G
Sbjct: 197 FAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGA 256
Query: 213 GHFLFLED 220
H L
Sbjct: 257 PHGLLWTH 264
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} Length = 270 | Back alignment and structure |
|---|
Score = 47.5 bits (113), Expect = 3e-06
Identities = 34/196 (17%), Positives = 64/196 (32%), Gaps = 45/196 (22%)
Query: 32 RSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSG 91
+ + +++ G S+G L L +A +PD+ ++ N A + IPA
Sbjct: 105 KQRCQTIFVTGLSMGGTLTLYLAEHHPDIC-GIVPINAA-----------VDIPAIAAGM 152
Query: 92 QMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKET 151
L L + D ++ +A P +
Sbjct: 153 TGGGELPRYLDSIGSD------------------LKNPDVKELAYEKT--------PTAS 186
Query: 152 LLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRAL--PNCQTRRF 209
L L+L + A A+LD + LI S D ++P D + + + + R
Sbjct: 187 L---LQLAR-LMAQTKAKLDRIVCPALIFVSDEDHVVPP-GNADIIFQGISSTEKEIVRL 241
Query: 210 GGGGHFLFLEDGVDLV 225
H L+ ++
Sbjct: 242 RNSYHVATLDYDQPMI 257
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} Length = 281 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 5e-06
Identities = 33/201 (16%), Positives = 57/201 (28%), Gaps = 45/201 (22%)
Query: 36 RPVYLVGESLGACLALAVAAR-NPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMT 94
+ V LVG S+G + D ++ A L ++
Sbjct: 94 QNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVP---PYLYKS-------------- 136
Query: 95 LTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQ---DFVAMSSYLPVLANILPKET 151
P D+ ++ F I +R +F +++ +
Sbjct: 137 ----------EDHPEGALDDATIET-FKSGVINDRLAFLDEFTKGFFAAGDRTDLVSESF 185
Query: 152 LLWKLELLKSASAYANA-------------RLDAVKAQTLILCSGRDQLLPSEEEGDRLC 198
L+ ++ AS L+ TLI+ D +P E G
Sbjct: 186 RLYNWDIAAGASPKGTLDCITAFSKTDFRKDLEKFNIPTLIIHGDSDATVPFEYSGKLTH 245
Query: 199 RALPNCQTRRFGGGGHFLFLE 219
A+PN + GG H L
Sbjct: 246 EAIPNSKVALIKGGPHGLNAT 266
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 Length = 274 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 5e-06
Identities = 26/198 (13%), Positives = 55/198 (27%), Gaps = 38/198 (19%)
Query: 36 RPVYLVGESLGACLALAVAAR-NPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMT 94
R V LV S+G R +L + M + G
Sbjct: 86 RDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPV--------MIKSDKNPDGVPD 137
Query: 95 LTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTI-QERSQDFVAMSSYLPVLANILPKETLL 153
L + + + + +G F + + +Q
Sbjct: 138 EVFDALKNGVLTERSQF-WKDTAEGFFSANRPGNKVTQGNKDA----------------F 180
Query: 154 WKLELLKSASAYANA-----------RLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALP 202
W + + ++ L TL++ DQ++P + G + + +P
Sbjct: 181 WYMAMAQTIEGGVRCVDAFGYTDFTEDLKKFDIPTLVVHGDDDQVVPIDATGRKSAQIIP 240
Query: 203 NCQTRRFGGGGHFLFLED 220
N + + + G H + +
Sbjct: 241 NAELKVYEGSSHGIAMVP 258
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A Length = 255 | Back alignment and structure |
|---|
Score = 46.3 bits (110), Expect = 7e-06
Identities = 30/191 (15%), Positives = 56/191 (29%), Gaps = 41/191 (21%)
Query: 37 PVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTLT 96
+G S+G +A+ A PD L+ + I P+ +
Sbjct: 82 KATFIGHSMGGKAVMALTALAPDRIDKLVAID------------IAPVDYHVRRHDEIF- 128
Query: 97 LSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPV------LANILPKE 150
A++++ + S Q R Q M +L L
Sbjct: 129 --------------AAINAVSE-----SDAQTRQQAAAIMRQHLNEEGVIQFLLKSFVDG 169
Query: 151 TLLWKLELLKSASAY--ANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRR 208
+ + +L + ++ A L + G + E+ D L P +
Sbjct: 170 EWRFNVPVLWDQYPHIVGWEKIPAWDHPALFIPGGNSPYVS-EQYRDDLLAQFPQARAHV 228
Query: 209 FGGGGHFLFLE 219
G GH++ E
Sbjct: 229 IAGAGHWVHAE 239
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A Length = 293 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 7e-06
Identities = 39/205 (19%), Positives = 66/205 (32%), Gaps = 48/205 (23%)
Query: 38 VYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTLTL 97
V+L+G S G LALA A + D LI++ +S LT+
Sbjct: 99 VFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVP--------------------LTV 138
Query: 98 SYLLSLLTGDPLKM--AMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWK 155
+ L+ P K A+ ++ Q+ V + +L + +L
Sbjct: 139 KEMNRLIDELPAKYRDAIKKYGSSGSYEN---PEYQEAVNYFYHQHLLRSEDWPPEVLKS 195
Query: 156 LELLKSASAYANA-------------------RLDAVKAQTLILCSGR-DQLLPSEEEGD 195
LE + + Y ++ A+K TLI G D++ P
Sbjct: 196 LEYAERRNVYRIMNGPNEFTITGTIKDWDITDKISAIKIPTLITV-GEYDEVTP--NVAR 252
Query: 196 RLCRALPNCQTRRFGGGGHFLFLED 220
+ + + F H ED
Sbjct: 253 VIHEKIAGSELHVFRDCSHLTMWED 277
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 1cqw_A 2v9z_A Length = 299 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 1e-05
Identities = 45/202 (22%), Positives = 68/202 (33%), Gaps = 29/202 (14%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLV--LILANPATSFRKSLLQTIMPIPA-ELMSGQ 92
V LV G+ L A RNP+ V + I P P +
Sbjct: 98 EEVVLVIHDWGSALGFHWAKRNPER--VKGIACME-----------FIRPFPTWDEWPEF 144
Query: 93 MTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETL 152
T + G L + ++ ++G + ++ ++ M Y + +E L
Sbjct: 145 ARETFQAFRTADVGRELIIDQNAFIEGALPKCVVRPLTEV--EMDHYREPFLKPVDREPL 202
Query: 153 LWKLELLKSASAYAN---------ARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPN 203
L A AN L L+ L+P E RL +LPN
Sbjct: 203 WRFPNELPIAGEPANIVALVEAYMNWLHQSPVPKLLFWGTPGVLIP-PAEAARLAESLPN 261
Query: 204 CQTRRFGGGGHFLFLEDGVDLV 225
C+T G G H+L ED DL+
Sbjct: 262 CKTVDIGPGLHYL-QEDNPDLI 282
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.4 bits (109), Expect = 2e-05
Identities = 48/300 (16%), Positives = 89/300 (29%), Gaps = 79/300 (26%)
Query: 18 LLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPD------MDLVLILANPAT 71
L +I +IR N ++ + L + ++ P L +
Sbjct: 329 RLSIIAESIRDGLATWDNWK-HVNCDKLTTIIESSLNVLEPAEYRKMFDRLSV------- 380
Query: 72 SFRKSLLQTIMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQ 131
F S IP L LSL+ D +K + +V L S ++++ +
Sbjct: 381 -FPPSA-----HIPTIL------------LSLIWFDVIKSDVMVVVNKLHKYSLVEKQPK 422
Query: 132 DFVAMSSYLPVLANILPKETLLWKLELLKSAS--AYANARLDAVKAQTLILCSGRDQLLP 189
+ + +P + LEL + + V + D L+P
Sbjct: 423 ES---TISIPSIY-----------LELKVKLENEYALHRSI--VDHYNIPKTFDSDDLIP 466
Query: 190 SEEEG---DRLCRALPNC-QTRRFGGGGH-FL---FLEDGVDLVTTIKGAGYYRRGRIVD 241
+ + L N R FL FLE + +T A G I++
Sbjct: 467 PYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNA----SGSILN 522
Query: 242 YVSDFIPPTTIEVNKVYEEYRWMVDLTSSVMLSTLPDGKIVRGLSGIPSEGPVLLVGNHM 301
+ K Y+ Y D +++ + L +P L+ +
Sbjct: 523 TLQQL---------KFYKPYICDNDPKYERLVNAI--------LDFLPKIEENLICSKYT 565
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 Length = 275 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 4e-05
Identities = 30/201 (14%), Positives = 56/201 (27%), Gaps = 43/201 (21%)
Query: 36 RPVYLVGESL-GACLALAVAARNPDMDLV--LILANPATSFRKSLLQTIMPIPAELMSGQ 92
R +G S G +A VA P V +L + +P E+
Sbjct: 88 RGAVHIGHSTGGGEVARYVARAEPG--RVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDE- 144
Query: 93 MTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTI--QERSQDFVAMSSYLPVLANILPKE 150
+ L + + +D + G F SQ +
Sbjct: 145 -------FRAALAANRAQFYID-VPSGPFYGFNREGATVSQGLIDH-------------- 182
Query: 151 TLLWKLELLKSASAYAN-----------ARLDAVKAQTLILCSGRDQLLPSEEEGDRLCR 199
W ++ +A+A+ L + L+ DQ++P + +
Sbjct: 183 --WWLQGMMGAANAHYECIAAFSETDFTDDLKRIDVPVLVAHGTDDQVVPYADAAPKSAE 240
Query: 200 ALPNCQTRRFGGGGHFLFLED 220
L N + + G H +
Sbjct: 241 LLANATLKSYEGLPHGMLSTH 261
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* Length = 316 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 2e-04
Identities = 38/202 (18%), Positives = 66/202 (32%), Gaps = 18/202 (8%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLV--LILAN-PATSFRKSLLQTIMPIPAELMSGQ 92
YLV + G LA +AAR PD V L + +
Sbjct: 95 TSAYLVAQDWGTALAFHLAARRPDF--VRGLAFMEFIRPMPTWQDFHHTEVAEEQDHAEA 152
Query: 93 MTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLAN------- 145
+ G+ + + ++ V+ + +++ + M+ Y
Sbjct: 153 ARAVFRKFRTPGEGEAMILEANAFVERVLPGGIVRKLGDE--EMAPYRTPFPTPESRRPV 210
Query: 146 -ILPKET-LLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPN 203
P+E + + + A A+A L A L+ L+ E +R +L
Sbjct: 211 LAFPRELPIAGEPADVYEALQSAHAALAASSYPKLLFTGEPGALVS-PEFAERFAASLTR 269
Query: 204 CQTRRFGGGGHFLFLEDGVDLV 225
C R G G H+L ED D +
Sbjct: 270 CALIRLGAGLHYL-QEDHADAI 290
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} Length = 330 | Back alignment and structure |
|---|
Score = 42.1 bits (99), Expect = 2e-04
Identities = 30/199 (15%), Positives = 66/199 (33%), Gaps = 43/199 (21%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLV--LILANPATSFRKSLLQTIMPIPAELMSGQM 93
++VG SLG A+ +AA P DLV L+L + P + +
Sbjct: 146 GAEFVVGMSLGGLTAIRLAAMAP--DLVGELVLVDVT------------PSALQRHAELT 191
Query: 94 TLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLP-------VLANI 146
+A+ + + Q +A + + V N
Sbjct: 192 AEQRG-----------TVALMHGEREF---PSFQAMLDLTIAAAPHRDVKSLRRGVFHNS 237
Query: 147 LPKE--TLLWKLELLKSASAYAN--ARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALP 202
+ +W+ + +++ +A +DA+ A ++ G + ++++ L R
Sbjct: 238 RRLDNGNWVWRYDAIRTFGDFAGLWDDVDALSAPITLVRGGSSGFV-TDQDTAELHRRAT 296
Query: 203 NCQT-RRFGGGGHFLFLED 220
+ + GH + +
Sbjct: 297 HFRGVHIVEKSGHSVQSDQ 315
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} Length = 285 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 4e-04
Identities = 26/196 (13%), Positives = 59/196 (30%), Gaps = 32/196 (16%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLV--LILANPATSFRKSLLQTIMPIPAELMSGQM 93
+G SLG L + +AA NP + +L + L+ I
Sbjct: 97 ERFVAIGTSLGGLLTMLLAAANPA--RIAAAVLNDVGPEVSPEGLERI------------ 142
Query: 94 TLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLL 153
Y+ + A ++ + + +Q + + ++ +
Sbjct: 143 ---RGYVGQGRNFETWMHAARALQESSGDVYPDWDITQWLRYAKRIMVLGSS--GRIAFD 197
Query: 154 WKLELLKSASAYANA--------RLDAVKAQ-TLILCSGRDQLLPSEEEGDRLCRALPNC 204
+ +++ + A A DA+ + L+L +L + + P
Sbjct: 198 YDMKIAEPFEAPVGATPQVDMWPLFDALATRPLLVLRGETSDILS--AQTAAKMASRPGV 255
Query: 205 QTRRFGGGGHFLFLED 220
+ GH L++
Sbjct: 256 ELVTLPRIGHAPTLDE 271
|
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} Length = 266 | Back alignment and structure |
|---|
Score = 40.7 bits (96), Expect = 4e-04
Identities = 27/188 (14%), Positives = 60/188 (31%), Gaps = 31/188 (16%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTL 95
R + +G SLG + +A P L+LAN + G
Sbjct: 93 RRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWL-----------------GPAAQ 135
Query: 96 TLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERS---QDFVAMSSYLPVLANILPKETL 152
+ ++L + + + F + ++ + F AM ++A + L
Sbjct: 136 WDERIAAVLQAEDMSETAAGFLGNWFPPALLERAEPVVERFRAM-----LMAT--NRHGL 188
Query: 153 LWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGG 212
+ A+L ++ TL++ D + + G+ + ++ +
Sbjct: 189 AGSFAAV--RDTDLRAQLARIERPTLVIAGAYDTVTAA-SHGELIAASIAGARLVTL-PA 244
Query: 213 GHFLFLED 220
H +E
Sbjct: 245 VHLSNVEF 252
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A Length = 310 | Back alignment and structure |
|---|
Score = 40.1 bits (94), Expect = 8e-04
Identities = 29/202 (14%), Positives = 57/202 (28%), Gaps = 24/202 (11%)
Query: 36 RPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTL 95
R + LV + G L L + +P LI+ N P+ S +T
Sbjct: 116 RNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXLMTD--------PVTQPAFSAFVTQ 167
Query: 96 TLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYL--------PVLANIL 147
+ + F++ ++ S+Y
Sbjct: 168 PADGFTAWKYDLVTPSDLR---LDQFMKRWAPTLTEA--EASAYAAPFPDTSYQAGVRKF 222
Query: 148 PKETLLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNC-QT 206
PK + ++ + + QT + +D+LL + + + C +
Sbjct: 223 PKMVAQRDQAXIDISTEAISFWQNDWNGQTFMAIGMKDKLLGPDVM-YPMKALINGCPEP 281
Query: 207 RRFGGGGHFLFLEDGVDLVTTI 228
GHF+ E G +
Sbjct: 282 LEIADAGHFV-QEFGEQVAREA 302
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 435 | |||
| 3v48_A | 268 | Aminohydrolase, putative aminoacrylate hydrolase R | 99.92 | |
| 3om8_A | 266 | Probable hydrolase; structural genomics, PSI-2, pr | 99.91 | |
| 2puj_A | 286 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; | 99.9 | |
| 1iup_A | 282 | META-cleavage product hydrolase; aromatic compound | 99.9 | |
| 2wue_A | 291 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas | 99.9 | |
| 1brt_A | 277 | Bromoperoxidase A2; haloperoxidase, oxidoreductase | 99.89 | |
| 2xua_A | 266 | PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate | 99.89 | |
| 1c4x_A | 285 | BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di | 99.89 | |
| 3fob_A | 281 | Bromoperoxidase; structural genomics, IDP00046, ba | 99.88 | |
| 1wom_A | 271 | RSBQ, sigma factor SIGB regulation protein RSBQ; a | 99.88 | |
| 3bf7_A | 255 | Esterase YBFF; thioesterase, helical CAP, hydrolas | 99.88 | |
| 1u2e_A | 289 | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | 99.88 | |
| 3ia2_A | 271 | Arylesterase; alpha-beta hydrolase fold, transitio | 99.88 | |
| 3afi_E | 316 | Haloalkane dehalogenase; A/B-hydrolase, hydrolase; | 99.88 | |
| 1ehy_A | 294 | Protein (soluble epoxide hydrolase); alpha/beta hy | 99.87 | |
| 3nwo_A | 330 | PIP, proline iminopeptidase; structural genomics, | 99.87 | |
| 2xt0_A | 297 | Haloalkane dehalogenase; hydrolase, alpha-beta hyd | 99.87 | |
| 1b6g_A | 310 | Haloalkane dehalogenase; hydrolase, alpha/beta-hyd | 99.87 | |
| 2yys_A | 286 | Proline iminopeptidase-related protein; TTHA1809, | 99.87 | |
| 2xmz_A | 269 | Hydrolase, alpha/beta hydrolase fold family; menaq | 99.87 | |
| 3kda_A | 301 | CFTR inhibitory factor (CIF); alpha/beta hydrolase | 99.87 | |
| 1hkh_A | 279 | Gamma lactamase; hydrolase, alpha/beta hydrolase, | 99.87 | |
| 1j1i_A | 296 | META cleavage compound hydrolase; carbazole degrad | 99.86 | |
| 1a8q_A | 274 | Bromoperoxidase A1; haloperoxidase, oxidoreductase | 99.86 | |
| 1zoi_A | 276 | Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo | 99.86 | |
| 2ocg_A | 254 | Valacyclovir hydrolase; alpha beta hydrolase fold; | 99.86 | |
| 3g9x_A | 299 | Haloalkane dehalogenase; alpha/beta hydrolase, hel | 99.86 | |
| 1a88_A | 275 | Chloroperoxidase L; haloperoxidase, oxidoreductase | 99.86 | |
| 2wfl_A | 264 | Polyneuridine-aldehyde esterase; alkaloid metaboli | 99.86 | |
| 3c6x_A | 257 | Hydroxynitrilase; atomic resolution, hydroxynitril | 99.86 | |
| 3oos_A | 278 | Alpha/beta hydrolase family protein; APC67239.0, p | 99.86 | |
| 4dnp_A | 269 | DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petu | 99.85 | |
| 1a8s_A | 273 | Chloroperoxidase F; haloperoxidase, oxidoreductase | 99.85 | |
| 1m33_A | 258 | BIOH protein; alpha-betta-alpha sandwich, structur | 99.85 | |
| 1q0r_A | 298 | RDMC, aclacinomycin methylesterase; anthracycline, | 99.85 | |
| 1xkl_A | 273 | SABP2, salicylic acid-binding protein 2; alpha-bet | 99.85 | |
| 3u1t_A | 309 | DMMA haloalkane dehalogenase; alpha/beta-hydrolase | 99.84 | |
| 3p2m_A | 330 | Possible hydrolase; alpha/beta hydrolase superfami | 99.84 | |
| 3hss_A | 293 | Putative bromoperoxidase; alpha beta hydrolase, ox | 99.84 | |
| 1mtz_A | 293 | Proline iminopeptidase; alpha-beta hydrolase, CAP | 99.84 | |
| 3dqz_A | 258 | Alpha-hydroxynitrIle lyase-like protein; A/B-hydrl | 99.84 | |
| 3fsg_A | 272 | Alpha/beta superfamily hydrolase; PF00561, MCSG, P | 99.84 | |
| 3ibt_A | 264 | 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, | 99.84 | |
| 2wj6_A | 276 | 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxid | 99.84 | |
| 4f0j_A | 315 | Probable hydrolytic enzyme; alpha/beta hydrolase f | 99.83 | |
| 3qvm_A | 282 | OLEI00960; structural genomics, PSI-biology, midwe | 99.83 | |
| 2psd_A | 318 | Renilla-luciferin 2-monooxygenase; alpha/beta-hydr | 99.83 | |
| 3bwx_A | 285 | Alpha/beta hydrolase; YP_496220.1, joint center fo | 99.83 | |
| 3r40_A | 306 | Fluoroacetate dehalogenase; FACD, defluorinase, al | 99.83 | |
| 3sty_A | 267 | Methylketone synthase 1; alpha/beta hydrolase, dec | 99.82 | |
| 2cjp_A | 328 | Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tu | 99.82 | |
| 1mj5_A | 302 | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; | 99.82 | |
| 3kxp_A | 314 | Alpha-(N-acetylaminomethylene)succinic acid hydrol | 99.82 | |
| 2qmq_A | 286 | Protein NDRG2, protein NDR2; alpha/beta-hydrolases | 99.82 | |
| 3qit_A | 286 | CURM TE, polyketide synthase; thioesterase, alpha/ | 99.82 | |
| 2qvb_A | 297 | Haloalkane dehalogenase 3; RV2579, alpha-beta hydr | 99.82 | |
| 4fbl_A | 281 | LIPS lipolytic enzyme; thermostable, structural ge | 99.81 | |
| 1wm1_A | 317 | Proline iminopeptidase; complex with inhibitor, hy | 99.81 | |
| 3r0v_A | 262 | Alpha/beta hydrolase fold protein; structural geno | 99.81 | |
| 3i1i_A | 377 | Homoserine O-acetyltransferase; structural genomic | 99.81 | |
| 3pe6_A | 303 | Monoglyceride lipase; alpha-beta hydrolase fold, 2 | 99.81 | |
| 1tqh_A | 247 | Carboxylesterase precursor; tetrahedral intermedia | 99.81 | |
| 3hju_A | 342 | Monoglyceride lipase; alpha/beta hydrolase, hydrol | 99.8 | |
| 3qyj_A | 291 | ALR0039 protein; alpha/beta fold, hydrolase; 1.78A | 99.8 | |
| 2pl5_A | 366 | Homoserine O-acetyltransferase; alpha/beta hydrola | 99.8 | |
| 2r11_A | 306 | Carboxylesterase NP; 2632844, putative hydrolase, | 99.8 | |
| 1azw_A | 313 | Proline iminopeptidase; aminopeptidase, serine pro | 99.8 | |
| 2vat_A | 444 | Acetyl-COA--deacetylcephalosporin C acetyltransfer | 99.8 | |
| 2y6u_A | 398 | Peroxisomal membrane protein LPX1; hydrolase, puta | 99.8 | |
| 4g9e_A | 279 | AHL-lactonase, alpha/beta hydrolase fold protein; | 99.8 | |
| 3e0x_A | 245 | Lipase-esterase related protein; APC60309, clostri | 99.79 | |
| 2b61_A | 377 | Homoserine O-acetyltransferase; acyl-enzyme, aspar | 99.79 | |
| 2e3j_A | 356 | Epoxide hydrolase EPHB; epoxide hydrolase B, struc | 99.79 | |
| 3c5v_A | 316 | PME-1, protein phosphatase methylesterase 1; demet | 99.78 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.78 | |
| 3vdx_A | 456 | Designed 16NM tetrahedral protein CAGE containing | 99.78 | |
| 2wtm_A | 251 | EST1E; hydrolase; 1.60A {Clostridium proteoclastic | 99.77 | |
| 3l80_A | 292 | Putative uncharacterized protein SMU.1393C; alpha/ | 99.77 | |
| 1r3d_A | 264 | Conserved hypothetical protein VC1974; structural | 99.76 | |
| 4i19_A | 388 | Epoxide hydrolase; structural genomics, PSI-biolog | 99.76 | |
| 1iuq_A | 367 | Glycerol-3-phosphate acyltransferase; open twisted | 99.76 | |
| 1pja_A | 302 | Palmitoyl-protein thioesterase 2 precursor; hydrol | 99.76 | |
| 3b12_A | 304 | Fluoroacetate dehalogenase; dehalogease, hydrolase | 99.6 | |
| 3pfb_A | 270 | Cinnamoyl esterase; alpha/beta hydrolase fold, hyd | 99.75 | |
| 3dkr_A | 251 | Esterase D; alpha beta hydrolase, mechanism, catal | 99.74 | |
| 3fla_A | 267 | RIFR; alpha-beta hydrolase thioesterase, hydrolase | 99.74 | |
| 3bdv_A | 191 | Uncharacterized protein DUF1234; DUF1234 family pr | 99.72 | |
| 3bdi_A | 207 | Uncharacterized protein TA0194; NP_393672.1, predi | 99.72 | |
| 3llc_A | 270 | Putative hydrolase; structural genomics, joint cen | 99.72 | |
| 1k8q_A | 377 | Triacylglycerol lipase, gastric; APHA beta hydrola | 99.71 | |
| 1tht_A | 305 | Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1. | 99.71 | |
| 3rm3_A | 270 | MGLP, thermostable monoacylglycerol lipase; alpha/ | 99.71 | |
| 3g02_A | 408 | Epoxide hydrolase; alpha/beta hydrolase fold, enan | 99.7 | |
| 1uxo_A | 192 | YDEN protein; hydrolase, A/B hydrolase, esterase, | 99.68 | |
| 2qs9_A | 194 | Retinoblastoma-binding protein 9; B5T overexpresse | 99.67 | |
| 3qmv_A | 280 | Thioesterase, REDJ; alpha/beta hydrolase fold, hyd | 99.66 | |
| 1imj_A | 210 | CIB, CCG1-interacting factor B; alpha/beta hydrola | 99.66 | |
| 3ils_A | 265 | PKS, aflatoxin biosynthesis polyketide synthase; A | 99.65 | |
| 2rau_A | 354 | Putative esterase; NP_343859.1, putative lipase, s | 99.64 | |
| 1ufo_A | 238 | Hypothetical protein TT1662; alpha-beta fold, hydr | 99.64 | |
| 3h04_A | 275 | Uncharacterized protein; protein with unknown func | 99.63 | |
| 2q0x_A | 335 | Protein DUF1749, uncharacterized protein; alpha/be | 99.62 | |
| 3trd_A | 208 | Alpha/beta hydrolase; cellular processes; 1.50A {C | 99.6 | |
| 2i3d_A | 249 | AGR_C_3351P, hypothetical protein ATU1826; structu | 99.59 | |
| 2qjw_A | 176 | Uncharacterized protein XCC1541; putative hydrolas | 99.59 | |
| 1isp_A | 181 | Lipase; alpha/beta hydrolase fold, hydrolase; 1.30 | 99.58 | |
| 4fle_A | 202 | Esterase; structural genomics, PSI-biology, northe | 99.58 | |
| 2pbl_A | 262 | Putative esterase/lipase/thioesterase; alpha/beta- | 99.57 | |
| 1fj2_A | 232 | Protein (acyl protein thioesterase 1); alpha/beta | 99.56 | |
| 2o2g_A | 223 | Dienelactone hydrolase; YP_324580.1, structural ge | 99.56 | |
| 3ksr_A | 290 | Putative serine hydrolase; catalytic triad, struct | 99.55 | |
| 1auo_A | 218 | Carboxylesterase; hydrolase; 1.80A {Pseudomonas fl | 99.54 | |
| 1jfr_A | 262 | Lipase; serine hydrolase; 1.90A {Streptomyces exfo | 99.54 | |
| 1kez_A | 300 | Erythronolide synthase; polyketide synthase, modul | 99.54 | |
| 2r8b_A | 251 | AGR_C_4453P, uncharacterized protein ATU2452; APC6 | 99.52 | |
| 2fuk_A | 220 | XC6422 protein; A/B hydrolase, structural genomics | 99.52 | |
| 1vkh_A | 273 | Putative serine hydrolase; structural genomics, jo | 99.52 | |
| 3cn9_A | 226 | Carboxylesterase; alpha/beta hydrolase fold super- | 99.51 | |
| 3fcy_A | 346 | Xylan esterase 1; alpha/beta hydrolase, carbohydra | 99.49 | |
| 1zi8_A | 236 | Carboxymethylenebutenolidase; alpha and beta prote | 99.49 | |
| 2jbw_A | 386 | Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine | 99.48 | |
| 3tjm_A | 283 | Fatty acid synthase; thioesterase domain, fatty ac | 99.48 | |
| 1qlw_A | 328 | Esterase; anisotropic refinement, atomic resolutio | 99.48 | |
| 3u0v_A | 239 | Lysophospholipase-like protein 1; alpha, beta hydr | 99.47 | |
| 2k2q_B | 242 | Surfactin synthetase thioesterase subunit; A/B-hyd | 99.47 | |
| 3fnb_A | 405 | Acylaminoacyl peptidase SMU_737; alpha-beta-alpha | 99.46 | |
| 3lcr_A | 319 | Tautomycetin biosynthetic PKS; alpha-beta hydrolas | 99.46 | |
| 3ds8_A | 254 | LIN2722 protein; unkonwn function, structural geno | 99.45 | |
| 3tej_A | 329 | Enterobactin synthase component F; nonribosomal pe | 99.42 | |
| 3lp5_A | 250 | Putative cell surface hydrolase; structural genom | 99.42 | |
| 2h1i_A | 226 | Carboxylesterase; structural genomics, PSI-2, prot | 99.42 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.41 | |
| 3b5e_A | 223 | MLL8374 protein; NP_108484.1, carboxylesterase, st | 99.4 | |
| 3vis_A | 306 | Esterase; alpha/beta-hydrolase fold, polyethylene | 99.39 | |
| 3bjr_A | 283 | Putative carboxylesterase; structural genomics, jo | 99.37 | |
| 3k2i_A | 422 | Acyl-coenzyme A thioesterase 4; alpha/beta hydrola | 99.37 | |
| 3d7r_A | 326 | Esterase; alpha/beta fold, hydrolase; 2.01A {Staph | 99.37 | |
| 2hdw_A | 367 | Hypothetical protein PA2218; alpha/beta hydrolase | 99.36 | |
| 3f67_A | 241 | Putative dienelactone hydrolase; alpha-beta-alpha | 99.36 | |
| 2o7r_A | 338 | CXE carboxylesterase; alpha/beta hydrolase; 1.40A | 99.34 | |
| 3fle_A | 249 | SE_1780 protein; structural genomics, APC61035.1, | 99.34 | |
| 2zsh_A | 351 | Probable gibberellin receptor GID1L1; plant hormon | 99.34 | |
| 3hlk_A | 446 | Acyl-coenzyme A thioesterase 2, mitochondrial; alp | 99.34 | |
| 3og9_A | 209 | Protein YAHD A copper inducible hydrolase; alpha/b | 99.33 | |
| 1vlq_A | 337 | Acetyl xylan esterase; TM0077, structural genomics | 99.32 | |
| 2fx5_A | 258 | Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pse | 99.31 | |
| 3hxk_A | 276 | Sugar hydrolase; alpha-beta protein., structural g | 99.3 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.29 | |
| 1l7a_A | 318 | Cephalosporin C deacetylase; structural genomics, | 99.29 | |
| 2hfk_A | 319 | Pikromycin, type I polyketide synthase pikaiv; alp | 99.29 | |
| 3bxp_A | 277 | Putative lipase/esterase; putative carboxylesteras | 99.29 | |
| 1jmk_C | 230 | SRFTE, surfactin synthetase; thioesterase, non-rib | 99.27 | |
| 1ei9_A | 279 | Palmitoyl protein thioesterase 1; alpha/beta hydro | 99.26 | |
| 3mve_A | 415 | FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/ | 99.23 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.23 | |
| 4e15_A | 303 | Kynurenine formamidase; alpha/beta hydrolase fold, | 99.23 | |
| 2cb9_A | 244 | Fengycin synthetase; thioesterase, non-ribosomal p | 99.22 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.21 | |
| 2qru_A | 274 | Uncharacterized protein; alpha/beta-hydrolase, str | 99.19 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.15 | |
| 4h0c_A | 210 | Phospholipase/carboxylesterase; PSI-biology, midwe | 99.15 | |
| 2c7b_A | 311 | Carboxylesterase, ESTE1; carboxyesterase, thermoph | 99.14 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.13 | |
| 3ain_A | 323 | 303AA long hypothetical esterase; carboxylesterase | 99.12 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.12 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.12 | |
| 3doh_A | 380 | Esterase; alpha-beta hydrolase, beta sheet; 2.60A | 99.11 | |
| 3k6k_A | 322 | Esterase/lipase; alpha/beta hydrolase fold; 2.20A | 99.1 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.08 | |
| 1ycd_A | 243 | Hypothetical 27.3 kDa protein in AAP1-SMF2 interge | 99.07 | |
| 2hm7_A | 310 | Carboxylesterase; alpha/beta hydrolase fold, hydro | 99.07 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.07 | |
| 1lns_A | 763 | X-prolyl dipeptidyl aminopetidase; alpha beta hydr | 99.07 | |
| 1jkm_A | 361 | Brefeldin A esterase; serine hydrolase, degradatio | 99.05 | |
| 3i6y_A | 280 | Esterase APC40077; lipase, structural genomics, PS | 99.02 | |
| 2wir_A | 313 | Pesta, alpha/beta hydrolase fold-3 domain protein; | 99.02 | |
| 1jji_A | 311 | Carboxylesterase; alpha-beta hydrolase fold, hydro | 99.01 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.01 | |
| 3ebl_A | 365 | Gibberellin receptor GID1; alpha/beta hydrolase, l | 98.98 | |
| 3fak_A | 322 | Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Unc | 98.98 | |
| 4fhz_A | 285 | Phospholipase/carboxylesterase; alpha/beta hydrola | 98.97 | |
| 3e4d_A | 278 | Esterase D; S-formylglutathione hydrolase, hydrola | 98.97 | |
| 3ga7_A | 326 | Acetyl esterase; phosphoserine, IDP00896, hydrolas | 98.96 | |
| 1tca_A | 317 | Lipase; hydrolase(carboxylic esterase); HET: NAG; | 98.95 | |
| 3qh4_A | 317 | Esterase LIPW; structural genomics, ssgcid, seattl | 98.95 | |
| 3fcx_A | 282 | FGH, esterase D, S-formylglutathione hydrolase; re | 98.95 | |
| 3ls2_A | 280 | S-formylglutathione hydrolase; psychrophilic organ | 98.93 | |
| 1lzl_A | 323 | Heroin esterase; alpha/beta hydrolase; 1.30A {Rhod | 98.92 | |
| 4hvt_A | 711 | Ritya.17583.B, post-proline cleaving enzyme; ssgci | 98.91 | |
| 4f21_A | 246 | Carboxylesterase/phospholipase family protein; str | 98.91 | |
| 2uz0_A | 263 | Esterase, tributyrin esterase; alpha/beta hydrolas | 98.9 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 98.89 | |
| 4b6g_A | 283 | Putative esterase; hydrolase, formaldehyde detoxif | 98.87 | |
| 3d59_A | 383 | Platelet-activating factor acetylhydrolase; secret | 98.8 | |
| 2px6_A | 316 | Thioesterase domain; thioesaterse domain, orlistat | 98.77 | |
| 4ao6_A | 259 | Esterase; hydrolase, thermo label; 1.60A {Unidenti | 98.76 | |
| 3d0k_A | 304 | Putative poly(3-hydroxybutyrate) depolymerase LPQ; | 98.7 | |
| 3n2z_B | 446 | Lysosomal Pro-X carboxypeptidase; alpha/beta hydro | 98.68 | |
| 1jjf_A | 268 | Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-x | 98.67 | |
| 4ezi_A | 377 | Uncharacterized protein; alpha-beta hydrolases fol | 98.66 | |
| 3h2g_A | 397 | Esterase; xanthomonas oryzae PV. oryzae, cell WALL | 98.64 | |
| 1sfr_A | 304 | Antigen 85-A; alpha/beta hydrolase, structural gen | 98.52 | |
| 1r88_A | 280 | MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBP | 98.5 | |
| 2d81_A | 318 | PHB depolymerase; alpha/beta hydrolase fold, circu | 98.49 | |
| 1ys1_X | 320 | Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor h | 98.45 | |
| 2dst_A | 131 | Hypothetical protein TTHA1544; conserved hypotheti | 98.39 | |
| 2x5x_A | 342 | PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE | 98.37 | |
| 1ex9_A | 285 | Lactonizing lipase; alpha-beta hydrolase fold, pho | 98.36 | |
| 1w52_X | 452 | Pancreatic lipase related protein 2; detergent, cl | 98.33 | |
| 1bu8_A | 452 | Protein (pancreatic lipase related protein 2); hyd | 98.33 | |
| 1hpl_A | 449 | Lipase; hydrolase(carboxylic esterase); 2.30A {Equ | 98.29 | |
| 3guu_A | 462 | Lipase A; protein structure, hydrolase; HET: 1PE; | 98.28 | |
| 3icv_A | 316 | Lipase B, CALB; circular permutation, cleavage on | 98.28 | |
| 2qm0_A | 275 | BES; alpha-beta structure, structural genomics, PS | 98.25 | |
| 1rp1_A | 450 | Pancreatic lipase related protein 1; hydrolase, li | 98.22 | |
| 1gkl_A | 297 | Endo-1,4-beta-xylanase Y; hydrolase, esterase fami | 98.2 | |
| 1gpl_A | 432 | RP2 lipase; serine esterase, hydrolase, lipid degr | 98.2 | |
| 1dqz_A | 280 | 85C, protein (antigen 85-C); fibronectin, structur | 98.18 | |
| 2zyr_A | 484 | Lipase, putative; fatty acid, hydrolase; HET: 1PE; | 98.14 | |
| 1mpx_A | 615 | Alpha-amino acid ester hydrolase; alpha/beta hydro | 98.1 | |
| 3i2k_A | 587 | Cocaine esterase; alpha/beta hydrolase, hydrolase; | 98.06 | |
| 2hih_A | 431 | Lipase 46 kDa form; A1 phospholipase, phospholipid | 98.05 | |
| 3gff_A | 331 | IROE-like serine hydrolase; NP_718593.1, structura | 97.91 | |
| 3iii_A | 560 | COCE/NOND family hydrolase; structural genomics, c | 97.9 | |
| 2b9v_A | 652 | Alpha-amino acid ester hydrolase; catalytic triad, | 97.84 | |
| 2vsq_A | 1304 | Surfactin synthetase subunit 3; ligase, peptidyl c | 97.75 | |
| 1tib_A | 269 | Lipase; hydrolase(carboxylic esterase); 1.84A {The | 97.58 | |
| 3pic_A | 375 | CIP2; alpha/beta hydrolase fold, glucuronoyl ester | 97.5 | |
| 2dsn_A | 387 | Thermostable lipase; T1 lipase, hydrolase; 1.50A { | 97.49 | |
| 4g4g_A | 433 | 4-O-methyl-glucuronoyl methylesterase; alpha/beta | 97.35 | |
| 3c8d_A | 403 | Enterochelin esterase; alpha-beta-alpha sandwich, | 97.18 | |
| 1tgl_A | 269 | Triacyl-glycerol acylhydrolase; carboxylic esteras | 97.14 | |
| 1lgy_A | 269 | Lipase, triacylglycerol lipase; hydrolase (carboxy | 97.11 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 97.08 | |
| 1whs_B | 153 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 97.07 | |
| 1tia_A | 279 | Lipase; hydrolase(carboxylic esterase); 2.10A {Pen | 97.04 | |
| 1cpy_A | 421 | Serine carboxypeptidase; hydrolase (carboxypeptida | 96.9 | |
| 3g8y_A | 391 | SUSD/RAGB-associated esterase-like protein; struct | 96.89 | |
| 1uwc_A | 261 | Feruloyl esterase A; hydrolase, serine esterase, x | 96.74 | |
| 2gzs_A | 278 | IROE protein; enterobactin, salmochelin, DFP, hydr | 96.67 | |
| 3g7n_A | 258 | Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A | 96.45 | |
| 3ngm_A | 319 | Extracellular lipase; secret lipase, hydrolase; 2. | 96.38 | |
| 4az3_B | 155 | Lysosomal protective protein 20 kDa chain; hydrola | 96.33 | |
| 3uue_A | 279 | LIP1, secretory lipase (family 3); LID-domain, hyd | 96.24 | |
| 3qpa_A | 197 | Cutinase; alpha-beta hydrolase fold, esterase, hyd | 96.08 | |
| 3nuz_A | 398 | Putative acetyl xylan esterase; structural genomic | 96.06 | |
| 4ebb_A | 472 | Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2 | 96.05 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 95.96 | |
| 3o0d_A | 301 | YALI0A20350P, triacylglycerol lipase; alpha/beta-h | 95.93 | |
| 3dcn_A | 201 | Cutinase, cutin hydrolase; catalytic triad, secret | 95.37 | |
| 3qpd_A | 187 | Cutinase 1; alpha-beta hydrolase fold, esterase, h | 94.91 | |
| 3hc7_A | 254 | Gene 12 protein, GP12; alpha/beta sandwich, cell a | 94.9 | |
| 4fol_A | 299 | FGH, S-formylglutathione hydrolase; D-type esteras | 94.79 | |
| 1gxs_B | 158 | P-(S)-hydroxymandelonitrIle lyase chain B; inhibit | 94.59 | |
| 1g66_A | 207 | Acetyl xylan esterase II; serine hydrolase, acetyl | 94.57 | |
| 1qoz_A | 207 | AXE, acetyl xylan esterase; hydrolase, xylan degra | 94.04 | |
| 2czq_A | 205 | Cutinase-like protein; alpha/beta hydrolase fold, | 93.66 | |
| 1whs_A | 255 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 93.64 | |
| 2ory_A | 346 | Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Ph | 93.26 | |
| 1ac5_A | 483 | KEX1(delta)P; carboxypeptidase, hydrolase, glycopr | 93.05 | |
| 3aja_A | 302 | Putative uncharacterized protein; alpha-beta hydro | 92.61 | |
| 1qe3_A | 489 | PNB esterase, para-nitrobenzyl esterase; alpha-bet | 92.45 | |
| 2ogt_A | 498 | Thermostable carboxylesterase EST50; alpha/beta hy | 91.68 | |
| 2h7c_A | 542 | Liver carboxylesterase 1; enzyme, cholesteryl este | 89.81 | |
| 2fj0_A | 551 | JuvenIle hormone esterase; manduca sexta, alpha-be | 88.94 | |
| 2yij_A | 419 | Phospholipase A1-iigamma; hydrolase; 2.00A {Arabid | 88.41 | |
| 2ha2_A | 543 | ACHE, acetylcholinesterase; hydrolase fold, serine | 88.41 | |
| 1thg_A | 544 | Lipase; hydrolase(carboxylic esterase); HET: NAG N | 88.3 | |
| 1llf_A | 534 | Lipase 3; candida cylindracea cholesterol esterase | 87.17 | |
| 1p0i_A | 529 | Cholinesterase; serine hydrolase, butyrate, hydrol | 86.34 | |
| 1ea5_A | 537 | ACHE, acetylcholinesterase; hydrolase, serine hydr | 85.95 | |
| 1ukc_A | 522 | ESTA, esterase; fungi, A/B hydrolase fold, acetylc | 85.34 | |
| 2bce_A | 579 | Cholesterol esterase; hydrolase, serine esterase, | 82.53 | |
| 1ac5_A | 483 | KEX1(delta)P; carboxypeptidase, hydrolase, glycopr | 80.55 |
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.9e-24 Score=191.81 Aligned_cols=209 Identities=20% Similarity=0.177 Sum_probs=130.2
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
||.|..+....|+++++++|+.+++++++. ++++|+||||||.+|+.+|.++|++|+++|++++.........
T Consensus 52 ~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~----~~~~lvGhS~GG~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~--- 124 (268)
T 3v48_A 52 TGNNPDTLAEDYSIAQMAAELHQALVAAGI----EHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTR--- 124 (268)
T ss_dssp BTTBCCCCCTTCCHHHHHHHHHHHHHHTTC----CSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHH---
T ss_pred CCCCCCCccccCCHHHHHHHHHHHHHHcCC----CCeEEEEecHHHHHHHHHHHhChhhceEEEEeccccccchhhh---
Confidence 688876666679999999999999999988 5899999999999999999999999999999997643211100
Q ss_pred cccccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhh
Q 013862 82 MPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKS 161 (435)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (435)
. ........................ ..+.............. ....................+
T Consensus 125 ------~----~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-- 187 (268)
T 3v48_A 125 ------R----CFQVRERLLYSGGAQAWVEAQPLF---LYPADWMAARAPRLEAE--DALALAHFQGKNNLLRRLNAL-- 187 (268)
T ss_dssp ------H----HHHHHHHHHHHHHHHHHHHHHHHH---HSCHHHHHTTHHHHHHH--HHHHHHTCCCHHHHHHHHHHH--
T ss_pred ------H----HHHHHHHHHhccchhhhhhhhhhh---cCchhhhhcccccchhh--HHHHHhhcCchhHHHHHHHHH--
Confidence 0 000000000000000000000000 00000000000000000 000000000111111111111
Q ss_pred hhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhccccccc
Q 013862 162 ASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRRG 237 (435)
Q Consensus 162 ~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~~ 237 (435)
...+..+.+.++++|||+|+|++|.++|.+ ..+.+.+.+|++++++++++||++++|+|++|++.|.+ |+.+.
T Consensus 188 ~~~d~~~~l~~i~~P~Lii~G~~D~~~p~~-~~~~l~~~~p~~~~~~~~~~GH~~~~e~p~~~~~~i~~--fl~~~ 260 (268)
T 3v48_A 188 KRADFSHHADRIRCPVQIICASDDLLVPTA-CSSELHAALPDSQKMVMPYGGHACNVTDPETFNALLLN--GLASL 260 (268)
T ss_dssp HHCBCTTTGGGCCSCEEEEEETTCSSSCTH-HHHHHHHHCSSEEEEEESSCCTTHHHHCHHHHHHHHHH--HHHHH
T ss_pred hccchhhhhhcCCCCeEEEEeCCCcccCHH-HHHHHHHhCCcCeEEEeCCCCcchhhcCHHHHHHHHHH--HHHHh
Confidence 111234678899999999999999999999 79999999999999999999999999999999999999 88643
|
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.91 E-value=2e-23 Score=186.96 Aligned_cols=200 Identities=13% Similarity=0.102 Sum_probs=127.4
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
||.|..+. ..|+++++++|+.+++++++. ++++|+||||||.+|+.+|.++|++|+++|++++......... .
T Consensus 64 ~G~S~~~~-~~~~~~~~a~dl~~~l~~l~~----~~~~lvGhS~Gg~va~~~A~~~P~rv~~lvl~~~~~~~~~~~~--~ 136 (266)
T 3om8_A 64 HGASSVPP-GPYTLARLGEDVLELLDALEV----RRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGPAAQ--W 136 (266)
T ss_dssp STTSCCCC-SCCCHHHHHHHHHHHHHHTTC----SCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSBCCCSHH--H
T ss_pred CCCCCCCC-CCCCHHHHHHHHHHHHHHhCC----CceEEEEEChHHHHHHHHHHhChHhhheeeEecCcccCCchhH--H
Confidence 68887654 469999999999999999988 4899999999999999999999999999999998753221100 0
Q ss_pred ccccccccc--chhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhh
Q 013862 82 MPIPAELMS--GQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELL 159 (435)
Q Consensus 82 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (435)
... ..... .................. ... ......+.+... ........+......+
T Consensus 137 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~--~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~ 195 (266)
T 3om8_A 137 DER-IAAVLQAEDMSETAAGFLGNWFPPA-------LLE--RAEPVVERFRAM-----------LMATNRHGLAGSFAAV 195 (266)
T ss_dssp HHH-HHHHHHCSSSHHHHHHHHHHHSCHH-------HHH--SCCHHHHHHHHH-----------HHTSCHHHHHHHHHHH
T ss_pred HHH-HHHHHccccHHHHHHHHHHHhcChh-------hhh--cChHHHHHHHHH-----------HHhCCHHHHHHHHHHh
Confidence 000 00000 000000000000000000 000 000001010000 0001111111111111
Q ss_pred hhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhccccc
Q 013862 160 KSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYR 235 (435)
Q Consensus 160 ~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~ 235 (435)
...+..+.+.++++|+|+|+|++|.+++++ ..+.+++.+|++++++++ +||++++|+|++|++.|.+ |+.
T Consensus 196 --~~~d~~~~l~~i~~P~Lvi~G~~D~~~~~~-~~~~l~~~ip~a~~~~i~-~gH~~~~e~p~~~~~~i~~--Fl~ 265 (266)
T 3om8_A 196 --RDTDLRAQLARIERPTLVIAGAYDTVTAAS-HGELIAASIAGARLVTLP-AVHLSNVEFPQAFEGAVLS--FLG 265 (266)
T ss_dssp --HTCBCTTTGGGCCSCEEEEEETTCSSSCHH-HHHHHHHHSTTCEEEEES-CCSCHHHHCHHHHHHHHHH--HHT
T ss_pred --hccchhhHhcCCCCCEEEEEeCCCCCCCHH-HHHHHHHhCCCCEEEEeC-CCCCccccCHHHHHHHHHH--Hhc
Confidence 112234678899999999999999999998 799999999999999998 8999999999999999999 874
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A | Back alignment and structure |
|---|
Probab=99.90 E-value=4.2e-23 Score=186.96 Aligned_cols=203 Identities=19% Similarity=0.200 Sum_probs=128.3
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
||.|..+....|+++++++|+.+++++++. ++++|+||||||.+|+.+|.++|++|+++|++++...... .....
T Consensus 74 ~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~----~~~~lvGhS~GG~va~~~A~~~p~~v~~lvl~~~~~~~~~-~~~~~ 148 (286)
T 2puj_A 74 FNKSDAVVMDEQRGLVNARAVKGLMDALDI----DRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPS-MFAPM 148 (286)
T ss_dssp STTSCCCCCSSCHHHHHHHHHHHHHHHTTC----CCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCC-SSSCS
T ss_pred CCCCCCCCCcCcCHHHHHHHHHHHHHHhCC----CceEEEEECHHHHHHHHHHHhChHhhheEEEECccccCCC-ccccc
Confidence 688876665579999999999999999988 5899999999999999999999999999999998753110 00000
Q ss_pred c-ccccccccc----hhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHH
Q 013862 82 M-PIPAELMSG----QMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKL 156 (435)
Q Consensus 82 ~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (435)
. .. ...... ...............+. ....++............. .......
T Consensus 149 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~------------~~~~~~~ 205 (286)
T 2puj_A 149 PMEG-IKLLFKLYAEPSYETLKQMLQVFLYDQ----------SLITEELLQGRWEAIQRQP------------EHLKNFL 205 (286)
T ss_dssp SCHH-HHHHHHHHHSCCHHHHHHHHHHHCSCG----------GGCCHHHHHHHHHHHHHCH------------HHHHHHH
T ss_pred chhh-HHHHHHHhhCCcHHHHHHHHHHHhcCC----------ccCCHHHHHHHHHHhhcCH------------HHHHHHH
Confidence 0 00 000000 00000000000000000 0001111111111000000 0000000
Q ss_pred hhhhh---hhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhccc
Q 013862 157 ELLKS---ASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGY 233 (435)
Q Consensus 157 ~~~~~---~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~F 233 (435)
..+.. ...+..+.+.++++|+|+|+|++|.++|.+ ..+.+.+.+|+++++++++|||++++|+|+++++.|.+ |
T Consensus 206 ~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~--f 282 (286)
T 2puj_A 206 ISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLD-HGLKLLWNIDDARLHVFSKCGAWAQWEHADEFNRLVID--F 282 (286)
T ss_dssp HHHHHSCGGGGCCGGGGGGCCSCEEEEEETTCSSSCTH-HHHHHHHHSSSEEEEEESSCCSCHHHHTHHHHHHHHHH--H
T ss_pred HHHhhhhccccchhhHHhhcCCCEEEEEECCCCccCHH-HHHHHHHHCCCCeEEEeCCCCCCccccCHHHHHHHHHH--H
Confidence 00000 011124567889999999999999999998 78999999999999999999999999999999999999 8
Q ss_pred cc
Q 013862 234 YR 235 (435)
Q Consensus 234 l~ 235 (435)
+.
T Consensus 283 l~ 284 (286)
T 2puj_A 283 LR 284 (286)
T ss_dssp HH
T ss_pred Hh
Confidence 75
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A | Back alignment and structure |
|---|
Probab=99.90 E-value=7.7e-23 Score=184.82 Aligned_cols=208 Identities=16% Similarity=0.222 Sum_probs=130.0
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
||.|..+....|+++++++|+.+++++++. ++++|+||||||.+|+.+|.++|++|+++|++++....... ....
T Consensus 65 ~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~----~~~~lvGhS~GG~ia~~~A~~~P~~v~~lvl~~~~~~~~~~-~~~~ 139 (282)
T 1iup_A 65 FGFTDRPENYNYSKDSWVDHIIGIMDALEI----EKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDV-TEGL 139 (282)
T ss_dssp STTSCCCTTCCCCHHHHHHHHHHHHHHTTC----CSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESCCCSCCCC-CHHH
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHhCC----CceEEEEECHhHHHHHHHHHHChHHHHHHHeeCCccCCCCC-CHHH
Confidence 688876665579999999999999999988 58999999999999999999999999999999987532110 0000
Q ss_pred cccccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhh
Q 013862 82 MPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKS 161 (435)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (435)
... .. ... ..............+. .....+......... ........+......... .....
T Consensus 140 ~~~-~~-~~~-~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~ 201 (282)
T 1iup_A 140 NAV-WG-YTP-SIENMRNLLDIFAYDR----------SLVTDELARLRYEAS-IQPGFQESFSSMFPEPRQ----RWIDA 201 (282)
T ss_dssp HHH-HT-CCS-CHHHHHHHHHHHCSSG----------GGCCHHHHHHHHHHH-TSTTHHHHHHHHSCSSTH----HHHHH
T ss_pred HHH-hc-CCC-cHHHHHHHHHHhhcCc----------ccCCHHHHHHHHhhc-cChHHHHHHHHHHhcccc----ccccc
Confidence 000 00 000 0011111111111110 000111111111000 000000001010100000 00000
Q ss_pred hhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhcccccc
Q 013862 162 ASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 162 ~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~ 236 (435)
. ....+.+.++++|+|+|+|++|.++|.+ ..+.+.+.+|++++++++++||++++|+|++|++.|.+ |+.+
T Consensus 202 ~-~~~~~~l~~i~~P~lii~G~~D~~~p~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~--fl~~ 272 (282)
T 1iup_A 202 L-ASSDEDIKTLPNETLIIHGREDQVVPLS-SSLRLGELIDRAQLHVFGRCGHWTQIEQTDRFNRLVVE--FFNE 272 (282)
T ss_dssp H-CCCHHHHTTCCSCEEEEEETTCSSSCHH-HHHHHHHHCTTEEEEEESSCCSCHHHHSHHHHHHHHHH--HHHT
T ss_pred c-ccchhhhhhcCCCEEEEecCCCCCCCHH-HHHHHHHhCCCCeEEEECCCCCCccccCHHHHHHHHHH--HHhc
Confidence 0 0012567889999999999999999988 78899999999999999999999999999999999999 9875
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A | Back alignment and structure |
|---|
Probab=99.90 E-value=2.4e-22 Score=182.37 Aligned_cols=203 Identities=16% Similarity=0.130 Sum_probs=128.8
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
||.|..+....|+++++++|+.+++++++. ++++|+||||||.+|+.+|.++|++|+++|++++...... ....
T Consensus 76 ~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~----~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~-~~~~- 149 (291)
T 2wue_A 76 YGHSDKRAEHGQFNRYAAMALKGLFDQLGL----GRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGGLSIN-LFAP- 149 (291)
T ss_dssp STTSCCCSCCSSHHHHHHHHHHHHHHHHTC----CSEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCSSSCCC-SSSC-
T ss_pred CCCCCCCCCCCcCHHHHHHHHHHHHHHhCC----CCeEEEEEChhHHHHHHHHHhChHhhcEEEEECCCCCCcc-cccc-
Confidence 688877665579999999999999999988 5899999999999999999999999999999998753210 0000
Q ss_pred cccccccccchhHHHHHHHHHhhcCChhHHHHHhhh-----hccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHH
Q 013862 82 MPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIV-----KGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKL 156 (435)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (435)
. .......... ... .... ........ .....++......... ..........
T Consensus 150 --~----~~~~~~~~~~-~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~ 206 (291)
T 2wue_A 150 --D----PTEGVKRLSK-FSV--APTR-ENLEAFLRVMVYDKNLITPELVDQRFALA-------------STPESLTATR 206 (291)
T ss_dssp --S----SCHHHHHHHH-HHH--SCCH-HHHHHHHHTSCSSGGGSCHHHHHHHHHHH-------------TSHHHHHHHH
T ss_pred --c----cchhhHHHHH-Hhc--cCCH-HHHHHHHHHhccCcccCCHHHHHHHHHHh-------------cCchHHHHHH
Confidence 0 0000000000 000 0000 00000000 0000111111111100 0000000011
Q ss_pred hhhhhh----h--hhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhh
Q 013862 157 ELLKSA----S--AYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKG 230 (435)
Q Consensus 157 ~~~~~~----~--~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~ 230 (435)
...... . ....+.+.++++|+|+|+|++|.++|.+ ..+.+.+.+|++++++++++||++++|+|+++++.|.+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~-~~~~~~~~~p~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 285 (291)
T 2wue_A 207 AMGKSFAGADFEAGMMWREVYRLRQPVLLIWGREDRVNPLD-GALVALKTIPRAQLHVFGQCGHWVQVEKFDEFNKLTIE 285 (291)
T ss_dssp HHHHHHTSTTGGGGCGGGTGGGCCSCEEEEEETTCSSSCGG-GGHHHHHHSTTEEEEEESSCCSCHHHHTHHHHHHHHHH
T ss_pred HHHhhccccccccchhHHHHhhCCCCeEEEecCCCCCCCHH-HHHHHHHHCCCCeEEEeCCCCCChhhhCHHHHHHHHHH
Confidence 000000 0 0111567889999999999999999998 68899999999999999999999999999999999999
Q ss_pred cccccc
Q 013862 231 AGYYRR 236 (435)
Q Consensus 231 ~~Fl~~ 236 (435)
|+.+
T Consensus 286 --fl~~ 289 (291)
T 2wue_A 286 --FLGG 289 (291)
T ss_dssp --HTTC
T ss_pred --HHhc
Confidence 8864
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A | Back alignment and structure |
|---|
Probab=99.89 E-value=2.9e-22 Score=180.52 Aligned_cols=205 Identities=12% Similarity=0.116 Sum_probs=126.5
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCC-ceeEEEEecCCcccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPD-MDLVLILANPATSFRKSLLQT 80 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~-~v~~lVli~~~~~~~~~~~~~ 80 (435)
||.|..+. ..++++++++|+.+++++++. ++++|+||||||.+|+.+|.++|+ +|+++|++++...........
T Consensus 61 ~G~S~~~~-~~~~~~~~a~dl~~~l~~l~~----~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~ 135 (277)
T 1brt_A 61 FGQSSQPT-TGYDYDTFAADLNTVLETLDL----QDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDN 135 (277)
T ss_dssp STTSCCCS-SCCSHHHHHHHHHHHHHHHTC----CSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTB
T ss_pred CCCCCCCC-CCccHHHHHHHHHHHHHHhCC----CceEEEEECccHHHHHHHHHHcCcceEEEEEEecCcCccccccccC
Confidence 67887554 569999999999999999987 589999999999999999999999 999999999854321110000
Q ss_pred ccccccccccchhHHHHHHHHHhhcCChhHHHH----Hhhh-----hccchhHHHHHhHHhHHhhhcchhHHhccCCchh
Q 013862 81 IMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAM----DSIV-----KGLFLQSTIQERSQDFVAMSSYLPVLANILPKET 151 (435)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (435)
. ........ ...+............. .... ......+........... ..
T Consensus 136 ~----~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~--- 194 (277)
T 1brt_A 136 P----DGAAPQEF---FDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAAS-----------GG--- 194 (277)
T ss_dssp T----TCSBCHHH---HHHHHHHHHHCHHHHHHHHHHHHTTHHHHBTTTBCHHHHHHHHHHHHH-----------SC---
T ss_pred c----cccccHHH---HHHHHHHHhcCchhhHHHHHHHHhhccccccccCCHHHHHHHHHHHhc-----------cc---
Confidence 0 00000000 00000000000000000 0000 000011111111110000 00
Q ss_pred hhhHHhhhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHH-HHHHhhCCCceEEEeCCCCccccccCchhHHHHHhh
Q 013862 152 LLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEG-DRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKG 230 (435)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~-~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~ 230 (435)
.......+.....+..+.+.++++|+|+|+|++|.++|.+ .. +.+.+.+|++++++++++||++++|+|+++++.|.+
T Consensus 195 ~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 273 (277)
T 1brt_A 195 FFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIE-NTARVFHKALPSAEYVEVEGAPHGLLWTHAEEVNTALLA 273 (277)
T ss_dssp HHHHHHGGGGTTCCCTTTGGGCCSCEEEEEETTCSSSCGG-GTHHHHHHHCTTSEEEEETTCCTTHHHHTHHHHHHHHHH
T ss_pred hHHHHHHHHHHhccchhhcccCCCCeEEEecCCCccCChH-HHHHHHHHHCCCCcEEEeCCCCcchhhhCHHHHHHHHHH
Confidence 0000011111111224567889999999999999999988 56 889999999999999999999999999999999999
Q ss_pred ccccc
Q 013862 231 AGYYR 235 (435)
Q Consensus 231 ~~Fl~ 235 (435)
|+.
T Consensus 274 --fl~ 276 (277)
T 1brt_A 274 --FLA 276 (277)
T ss_dssp --HHH
T ss_pred --HHh
Confidence 774
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.8e-22 Score=178.65 Aligned_cols=201 Identities=15% Similarity=0.108 Sum_probs=126.7
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
+|.|..+. ..+|++++++|+.+++++++. ++++|+||||||.+|+.+|.++|++|+++|++++......... .
T Consensus 63 ~G~S~~~~-~~~~~~~~~~dl~~~l~~l~~----~~~~lvGhS~Gg~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~--~ 135 (266)
T 2xua_A 63 HGHSEAPK-GPYTIEQLTGDVLGLMDTLKI----ARANFCGLSMGGLTGVALAARHADRIERVALCNTAARIGSPEV--W 135 (266)
T ss_dssp STTSCCCS-SCCCHHHHHHHHHHHHHHTTC----CSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCSCHHH--H
T ss_pred CCCCCCCC-CCCCHHHHHHHHHHHHHhcCC----CceEEEEECHHHHHHHHHHHhChhhhheeEEecCCCCCCchHH--H
Confidence 67776544 469999999999999999987 4899999999999999999999999999999998753211100 0
Q ss_pred cccccccccc-hhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhh
Q 013862 82 MPIPAELMSG-QMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLK 160 (435)
Q Consensus 82 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (435)
... ...... ............... . ... .........+... + .......+......+.
T Consensus 136 ~~~-~~~~~~~~~~~~~~~~~~~~~~-~------~~~--~~~~~~~~~~~~~----------~-~~~~~~~~~~~~~~~~ 194 (266)
T 2xua_A 136 VPR-AVKARTEGMHALADAVLPRWFT-A------DYM--EREPVVLAMIRDV----------F-VHTDKEGYASNCEAID 194 (266)
T ss_dssp HHH-HHHHHHHCHHHHHHHHHHHHSC-H------HHH--HHCHHHHHHHHHH----------H-HTSCHHHHHHHHHHHH
T ss_pred HHH-HHHHHhcChHHHHHHHHHHHcC-c------ccc--cCCHHHHHHHHHH----------H-hhCCHHHHHHHHHHHh
Confidence 000 000000 000000000000000 0 000 0000000000000 0 0011111111111111
Q ss_pred hhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhcccccc
Q 013862 161 SASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 161 ~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~ 236 (435)
..+..+.+.++++|+|+|+|++|.+++++ ..+.+.+.++++++++++ +||+++.|+|+++++.|.+ |+.+
T Consensus 195 --~~~~~~~l~~i~~P~lvi~G~~D~~~~~~-~~~~~~~~~~~~~~~~~~-~gH~~~~e~p~~~~~~i~~--fl~~ 264 (266)
T 2xua_A 195 --AADLRPEAPGIKVPALVISGTHDLAATPA-QGRELAQAIAGARYVELD-ASHISNIERADAFTKTVVD--FLTE 264 (266)
T ss_dssp --HCCCGGGGGGCCSCEEEEEETTCSSSCHH-HHHHHHHHSTTCEEEEES-CCSSHHHHTHHHHHHHHHH--HHTC
T ss_pred --ccCchhhhccCCCCEEEEEcCCCCcCCHH-HHHHHHHhCCCCEEEEec-CCCCchhcCHHHHHHHHHH--HHHh
Confidence 11234567889999999999999999998 789999999999999999 9999999999999999999 8864
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=99.89 E-value=4.9e-22 Score=179.72 Aligned_cols=212 Identities=12% Similarity=0.148 Sum_probs=127.9
Q ss_pred CccccccCCCCCChHHH----HHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccc
Q 013862 2 YGACIFQLQIGHHFTGL----LKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSL 77 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~----a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~ 77 (435)
||.|..+....++++++ ++|+.+++++++. ++++|+||||||.+|+.+|.++|++|+++|++++........
T Consensus 69 ~G~S~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~----~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~ 144 (285)
T 1c4x_A 69 FGQSEYPETYPGHIMSWVGMRVEQILGLMNHFGI----EKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNAR 144 (285)
T ss_dssp STTSCCCSSCCSSHHHHHHHHHHHHHHHHHHHTC----SSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSC
T ss_pred CCCCCCCCCcccchhhhhhhHHHHHHHHHHHhCC----CccEEEEEChHHHHHHHHHHhChHHhheEEEeccCCCCCCcc
Confidence 67787665557899999 9999999999987 589999999999999999999999999999999875321100
Q ss_pred cccccccccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHh
Q 013862 78 LQTIMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLE 157 (435)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (435)
....... .....................+.... ....+......... ........+.... ....
T Consensus 145 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~-~~~~~~~~~~~~~------~~~~ 208 (285)
T 1c4x_A 145 PPELARL-LAFYADPRLTPYRELIHSFVYDPENF--------PGMEEIVKSRFEVA-NDPEVRRIQEVMF------ESMK 208 (285)
T ss_dssp CHHHHHH-HTGGGSCCHHHHHHHHHTTSSCSTTC--------TTHHHHHHHHHHHH-HCHHHHHHHHHHH------HHHS
T ss_pred chhHHHH-HHHhccccHHHHHHHHHHhhcCcccc--------cCcHHHHHHHHHhc-cCHHHHHHHHHHh------cccc
Confidence 0000000 00000000001111111111000000 00011111111100 0000000000000 0000
Q ss_pred hhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhcccccc
Q 013862 158 LLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 158 ~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~ 236 (435)
............+.++++|+|+|+|++|.++|.+ ..+.+.+.++++++++++++||+++.|+|+++++.|.+ |+.+
T Consensus 209 ~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~p~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~--fl~~ 284 (285)
T 1c4x_A 209 AGMESLVIPPATLGRLPHDVLVFHGRQDRIVPLD-TSLYLTKHLKHAELVVLDRCGHWAQLERWDAMGPMLME--HFRA 284 (285)
T ss_dssp SCCGGGCCCHHHHTTCCSCEEEEEETTCSSSCTH-HHHHHHHHCSSEEEEEESSCCSCHHHHSHHHHHHHHHH--HHHC
T ss_pred ccccccccchhhhccCCCCEEEEEeCCCeeeCHH-HHHHHHHhCCCceEEEeCCCCcchhhcCHHHHHHHHHH--HHhc
Confidence 0000000122457789999999999999999998 68899999999999999999999999999999999999 8753
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.88 E-value=4.7e-22 Score=179.49 Aligned_cols=209 Identities=16% Similarity=0.117 Sum_probs=123.2
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhC-CCceeEEEEecCCcccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARN-PDMDLVLILANPATSFRKSLLQT 80 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~-p~~v~~lVli~~~~~~~~~~~~~ 80 (435)
||.|..+. ..++++++++|+.+++++++. ++++|+||||||.+++.+++.+ |++|+++|++++...........
T Consensus 65 ~G~S~~~~-~~~~~~~~a~dl~~ll~~l~~----~~~~lvGhS~GG~i~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 139 (281)
T 3fob_A 65 FGKSSQPW-EGYEYDTFTSDLHQLLEQLEL----QNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSEDH 139 (281)
T ss_dssp STTSCCCS-SCCSHHHHHHHHHHHHHHTTC----CSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSS
T ss_pred CCCCCCCc-cccCHHHHHHHHHHHHHHcCC----CcEEEEEECccHHHHHHHHHHccccceeEEEEecCCCcchhccccc
Confidence 67776554 579999999999999999988 5899999999999888877664 89999999999764321110000
Q ss_pred ccccccccccchhHHHH-HHHHHhhcCChhHHH-HHhhhh----ccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhh
Q 013862 81 IMPIPAELMSGQMTLTL-SYLLSLLTGDPLKMA-MDSIVK----GLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLW 154 (435)
Q Consensus 81 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (435)
.. ........... ........ ...... ...... ....+....... .. ...........
T Consensus 140 ~~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----------~~~~~~~~~~~ 203 (281)
T 3fob_A 140 PE----GALDDATIETFKSGVINDRL-AFLDEFTKGFFAAGDRTDLVSESFRLYNW-DI----------AAGASPKGTLD 203 (281)
T ss_dssp TT----CSBCHHHHHHHHHHHHHHHH-HHHHHHHHHHTCBTTBCCSSCHHHHHHHH-HH----------HHTSCHHHHHH
T ss_pred cc----cccchhHHHHHHHHhhhhHH-HHHHHHHHHhcccccccccchHHHHHHhh-hh----------hcccChHHHHH
Confidence 00 00000000000 00000000 000000 000000 000000000000 00 00000000000
Q ss_pred HHhhhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhcccc
Q 013862 155 KLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYY 234 (435)
Q Consensus 155 ~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl 234 (435)
....+ ...+..+.+.++++|+|+|+|++|.++|.+...+.+.+.+|++++++++++||+++.|+|++|++.|.+ |+
T Consensus 204 ~~~~~--~~~d~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~p~~~~~~i~~--Fl 279 (281)
T 3fob_A 204 CITAF--SKTDFRKDLEKFNIPTLIIHGDSDATVPFEYSGKLTHEAIPNSKVALIKGGPHGLNATHAKEFNEALLL--FL 279 (281)
T ss_dssp HHHHH--HHCCCHHHHTTCCSCEEEEEETTCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTHHHHTHHHHHHHHHH--HH
T ss_pred HHHHc--cccchhhhhhhcCCCEEEEecCCCCCcCHHHHHHHHHHhCCCceEEEeCCCCCchhhhhHHHHHHHHHH--Hh
Confidence 00001 111234567899999999999999999988323777889999999999999999999999999999999 87
Q ss_pred c
Q 013862 235 R 235 (435)
Q Consensus 235 ~ 235 (435)
+
T Consensus 280 ~ 280 (281)
T 3fob_A 280 K 280 (281)
T ss_dssp C
T ss_pred h
Confidence 5
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=4.6e-22 Score=178.55 Aligned_cols=209 Identities=14% Similarity=0.156 Sum_probs=126.2
Q ss_pred CccccccC---CCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccccc
Q 013862 2 YGACIFQL---QIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLL 78 (435)
Q Consensus 2 yG~s~~p~---~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~ 78 (435)
+|.|..+. ...++++++++|+.+++++++. ++++|+||||||.+|+.+|.++|++|+++|++++.........
T Consensus 57 ~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~----~~~~lvGhS~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 132 (271)
T 1wom_A 57 SGHSDLRAYDLNRYQTLDGYAQDVLDVCEALDL----KETVFVGHSVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPP 132 (271)
T ss_dssp CSSSCCTTCCTTGGGSHHHHHHHHHHHHHHTTC----SCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBEETT
T ss_pred CCCCCCCcccccccccHHHHHHHHHHHHHHcCC----CCeEEEEeCHHHHHHHHHHHhCHHhhcceEEEcCCCcCCCCCc
Confidence 57776543 3346999999999999999987 5899999999999999999999999999999998643211110
Q ss_pred ccccccccccccc-hhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHh
Q 013862 79 QTIMPIPAELMSG-QMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLE 157 (435)
Q Consensus 79 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (435)
.. ...... ............. .....................+.+...... ...........
T Consensus 133 ----~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~ 195 (271)
T 1wom_A 133 ----EY-YGGFEEEQLLGLLEMMEKNY-IGWATVFAATVLNQPDRPEIKEELESRFCS-----------TDPVIARQFAK 195 (271)
T ss_dssp ----TE-ECSBCHHHHHHHHHHHHHCH-HHHHHHHHHHHHCCTTCHHHHHHHHHHHHH-----------SCHHHHHHHHH
T ss_pred ----hh-ccCCCHHHHHHHHHHHhhhH-HHHHHHHHHHHhcCCCchHHHHHHHHHHhc-----------CCcHHHHHHHH
Confidence 00 001100 0000010000000 000000000000000001111111111100 00000000000
Q ss_pred hhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhcccccc
Q 013862 158 LLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 158 ~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~ 236 (435)
.. ...+....+.++++|+|+|+|++|.+++.+ ..+.+.+.++++++++++++||++++|+|+++++.|.+ |+.+
T Consensus 196 ~~--~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~--fl~~ 269 (271)
T 1wom_A 196 AA--FFSDHREDLSKVTVPSLILQCADDIIAPAT-VGKYMHQHLPYSSLKQMEARGHCPHMSHPDETIQLIGD--YLKA 269 (271)
T ss_dssp HH--HSCCCHHHHTTCCSCEEEEEEETCSSSCHH-HHHHHHHHSSSEEEEEEEEESSCHHHHCHHHHHHHHHH--HHHH
T ss_pred HH--hCcchHHhccccCCCEEEEEcCCCCcCCHH-HHHHHHHHCCCCEEEEeCCCCcCccccCHHHHHHHHHH--HHHh
Confidence 00 011223467789999999999999999988 78899999999999999999999999999999999999 8753
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A | Back alignment and structure |
|---|
Probab=99.88 E-value=3.6e-22 Score=177.62 Aligned_cols=202 Identities=12% Similarity=0.124 Sum_probs=122.9
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
+|.|..++ .++++++++|+.+++++++. ++++|+||||||.+|+.+|.++|++|+++|++++.+......
T Consensus 53 ~G~S~~~~--~~~~~~~a~dl~~~l~~l~~----~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~p~~~~~~---- 122 (255)
T 3bf7_A 53 HGLSPREP--VMNYPAMAQDLVDTLDALQI----DKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVR---- 122 (255)
T ss_dssp STTSCCCS--CCCHHHHHHHHHHHHHHHTC----SCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCCSC----
T ss_pred CCCCCCCC--CcCHHHHHHHHHHHHHHcCC----CCeeEEeeCccHHHHHHHHHhCcHhhccEEEEcCCcccCCcc----
Confidence 57776543 68999999999999999987 489999999999999999999999999999998643211100
Q ss_pred cccccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhh
Q 013862 82 MPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKS 161 (435)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (435)
. . ......+........... .......... ................ .. ........ ...+..
T Consensus 123 --~-~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~--~~~~~~~~---~~~~~~ 184 (255)
T 3bf7_A 123 --R-H----DEIFAAINAVSESDAQTR-QQAAAIMRQH-LNEEGVIQFLLKSFVD----GE--WRFNVPVL---WDQYPH 184 (255)
T ss_dssp --C-C----HHHHHHHHHHHHSCCCSH-HHHHHHHTTT-CCCHHHHHHHHTTEET----TE--ESSCHHHH---HHTHHH
T ss_pred --c-H----HHHHHHHHhccccccccH-HHHHHHHhhh-cchhHHHHHHHHhccC----Cc--eeecHHHH---Hhhhhh
Confidence 0 0 000000100000000000 0000000000 0000000000000000 00 00000000 000000
Q ss_pred hhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhcccccc
Q 013862 162 ASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 162 ~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~ 236 (435)
. .....+.++++|+|+|+|++|.+++++ ..+.+.+.+|++++++++++||+++.|+|+++++.|.+ |+.+
T Consensus 185 ~--~~~~~l~~i~~P~l~i~G~~D~~~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~--fl~~ 254 (255)
T 3bf7_A 185 I--VGWEKIPAWDHPALFIPGGNSPYVSEQ-YRDDLLAQFPQARAHVIAGAGHWVHAEKPDAVLRAIRR--YLND 254 (255)
T ss_dssp H--HCCCCCCCCCSCEEEECBTTCSTTCGG-GHHHHHHHCTTEEECCBTTCCSCHHHHCHHHHHHHHHH--HHHT
T ss_pred c--cccccccccCCCeEEEECCCCCCCCHH-HHHHHHHHCCCCeEEEeCCCCCccccCCHHHHHHHHHH--HHhc
Confidence 0 001246689999999999999999988 68999999999999999999999999999999999999 8753
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.88 E-value=6.1e-22 Score=179.48 Aligned_cols=203 Identities=17% Similarity=0.206 Sum_probs=127.3
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
+|.|..+....++++++++|+.+++++++. ++++|+||||||.+|+.+|.++|++|+++|++++....... .
T Consensus 77 ~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~----~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-~--- 148 (289)
T 1u2e_A 77 WGKSDSVVNSGSRSDLNARILKSVVDQLDI----AKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMSL-F--- 148 (289)
T ss_dssp STTSCCCCCSSCHHHHHHHHHHHHHHHTTC----CCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCS-S---
T ss_pred CCCCCCCCccccCHHHHHHHHHHHHHHhCC----CceEEEEECHhHHHHHHHHHHCHHhhhEEEEECCCcccccc-c---
Confidence 677876655578999999999999999987 58999999999999999999999999999999987531110 0
Q ss_pred cccccccccchhHHHHHHHHHhhcCChhHHHHHhh-----hhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHH
Q 013862 82 MPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSI-----VKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKL 156 (435)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (435)
................ ........... ......++............. .......
T Consensus 149 -----~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~ 208 (289)
T 1u2e_A 149 -----TPMPTEGIKRLNQLYR---QPTIENLKLMMDIFVFDTSDLTDALFEARLNNMLSRR------------DHLENFV 208 (289)
T ss_dssp -----SCSSCHHHHHHHHHHH---SCCHHHHHHHHHTTSSCTTSCCHHHHHHHHHHHHHTH------------HHHHHHH
T ss_pred -----cccchhhHHHHHHHHh---cchHHHHHHHHHHhhcCcccCCHHHHHHHHHHhhcCh------------hHHHHHH
Confidence 0000000000000000 00000000000 000000111111111000000 0000000
Q ss_pred hhhhh---hhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhccc
Q 013862 157 ELLKS---ASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGY 233 (435)
Q Consensus 157 ~~~~~---~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~F 233 (435)
..+.. ...+....+.++++|+|+|+|++|.++|.+ ..+.+.+.++++++++++++||++++|+|+++++.|.+ |
T Consensus 209 ~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~--f 285 (289)
T 1u2e_A 209 KSLEANPKQFPDFGPRLAEIKAQTLIVWGRNDRFVPMD-AGLRLLSGIAGSELHIFRDCGHWAQWEHADAFNQLVLN--F 285 (289)
T ss_dssp HHHHHCSCCSCCCGGGGGGCCSCEEEEEETTCSSSCTH-HHHHHHHHSTTCEEEEESSCCSCHHHHTHHHHHHHHHH--H
T ss_pred HHHHhccccccchhhHHhhcCCCeEEEeeCCCCccCHH-HHHHHHhhCCCcEEEEeCCCCCchhhcCHHHHHHHHHH--H
Confidence 00000 000123567789999999999999999998 78999999999999999999999999999999999999 8
Q ss_pred cc
Q 013862 234 YR 235 (435)
Q Consensus 234 l~ 235 (435)
++
T Consensus 286 l~ 287 (289)
T 1u2e_A 286 LA 287 (289)
T ss_dssp HT
T ss_pred hc
Confidence 75
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.4e-21 Score=175.24 Aligned_cols=207 Identities=15% Similarity=0.144 Sum_probs=121.6
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhC-CCceeEEEEecCCcccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARN-PDMDLVLILANPATSFRKSLLQT 80 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~-p~~v~~lVli~~~~~~~~~~~~~ 80 (435)
||.|..+. ..++++++++|+.+++++++. ++++|+||||||.+++.+++++ |++|+++|++++...........
T Consensus 57 ~G~S~~~~-~~~~~~~~a~d~~~~l~~l~~----~~~~lvGhS~GG~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 131 (271)
T 3ia2_A 57 FGRSDQPW-TGNDYDTFADDIAQLIEHLDL----KEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDY 131 (271)
T ss_dssp STTSCCCS-SCCSHHHHHHHHHHHHHHHTC----CSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTB
T ss_pred CccCCCCC-CCCCHHHHHHHHHHHHHHhCC----CCceEEEEcccHHHHHHHHHHhCCcccceEEEEccCCccccCCCCC
Confidence 67776543 468999999999999999988 5899999999999777766655 99999999999764322111000
Q ss_pred ccccccccccchhH-HHHHHHHHh---hcCChhHHHHHhhh-hccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhH
Q 013862 81 IMPIPAELMSGQMT-LTLSYLLSL---LTGDPLKMAMDSIV-KGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWK 155 (435)
Q Consensus 81 ~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (435)
......... ......... ....... ...... ................. . .... ..
T Consensus 132 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---------~--~~~~---~~ 191 (271)
T 3ia2_A 132 -----PQGVPLDVFARFKTELLKDRAQFISDFNA-PFYGINKGQVVSQGVQTQTLQIAL---------L--ASLK---AT 191 (271)
T ss_dssp -----TTSBCHHHHHHHHHHHHHHHHHHHHHHHH-HHHTGGGTCCCCHHHHHHHHHHHH---------H--SCHH---HH
T ss_pred -----cccccHHHHHHHHHHHHhhHHHHHHHhhH-hhhccccccccCHHHHHHHHhhhh---------h--ccHH---HH
Confidence 000000000 000000000 0000000 000000 00000000000000000 0 0000 00
Q ss_pred Hhhhhh-hhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhcccc
Q 013862 156 LELLKS-ASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYY 234 (435)
Q Consensus 156 ~~~~~~-~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl 234 (435)
...... ...+....+.++++|+|+|+|++|.++|.+...+.+.+..+++++++++++||+++.|+|+++++.|.+ |+
T Consensus 192 ~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~--Fl 269 (271)
T 3ia2_A 192 VDCVTAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAVTHAQQLNEDLLA--FL 269 (271)
T ss_dssp HHHHHHHHHCBCHHHHTTCCSCEEEEEETTCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTHHHHTHHHHHHHHHH--HH
T ss_pred HHHHHHhhccCCcccccCCCCCEEEEEeCCCCcCChHHHHHHHHHhCCCceEEEEcCCCCcccccCHHHHHHHHHH--Hh
Confidence 000100 111224567889999999999999999988325667778899999999999999999999999999999 87
Q ss_pred c
Q 013862 235 R 235 (435)
Q Consensus 235 ~ 235 (435)
+
T Consensus 270 ~ 270 (271)
T 3ia2_A 270 K 270 (271)
T ss_dssp T
T ss_pred h
Confidence 5
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=9.7e-23 Score=187.28 Aligned_cols=220 Identities=17% Similarity=0.197 Sum_probs=127.5
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
||.|..+ ...|+++++++|+.++++++++ ++++|+||||||.+|+.+|.++|++|+++|++++........ ..
T Consensus 66 ~G~S~~~-~~~~~~~~~a~dl~~ll~~l~~----~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~--~~ 138 (316)
T 3afi_E 66 FGQSGKP-DIAYRFFDHVRYLDAFIEQRGV----TSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEFIRPMPTWQ--DF 138 (316)
T ss_dssp STTSCCC-SSCCCHHHHHHHHHHHHHHTTC----CSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEECCCBSSGG--GT
T ss_pred CCCCCCC-CCCCCHHHHHHHHHHHHHHcCC----CCEEEEEeCccHHHHHHHHHHCHHhhhheeeeccCCCcchhh--hc
Confidence 7888764 3579999999999999999988 589999999999999999999999999999999743211000 00
Q ss_pred cccccccccchhH-HHHHHHHHhhcCChhHH---------HHHhhh---hccchhHHHHHhHHhHHhhhcchhHHh---c
Q 013862 82 MPIPAELMSGQMT-LTLSYLLSLLTGDPLKM---------AMDSIV---KGLFLQSTIQERSQDFVAMSSYLPVLA---N 145 (435)
Q Consensus 82 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---------~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 145 (435)
.. ......... ................. ...... ......+....+..... ......... .
T Consensus 139 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 215 (316)
T 3afi_E 139 HH--TEVAEEQDHAEAARAVFRKFRTPGEGEAMILEANAFVERVLPGGIVRKLGDEEMAPYRTPFP-TPESRRPVLAFPR 215 (316)
T ss_dssp TC--CCCGGGHHHHHHHHHHHHHHTSTTHHHHHHTTSCHHHHTTTGGGCSSCCCHHHHHHHHTTCC-STGGGHHHHHTGG
T ss_pred cc--hhhccccccchhHHHHHHHhcCCchhhHHHhccchHHHHhcccccCCCCCHHHHHHHHhhcC-CccchhHHHHHHH
Confidence 00 000000000 00000000000000000 000000 00000111111100000 000000000 0
Q ss_pred cCCchhhhhHHhhhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHH
Q 013862 146 ILPKETLLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLV 225 (435)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~ 225 (435)
........ .. .........+.+.++++|+|+|+|++|.+++.+ ..+.+.+.+|+++++++++|||++++|+|++|+
T Consensus 216 ~~~~~~~~--~~-~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~~~~-~~~~~~~~~p~~~~~~i~~~GH~~~~e~p~~~~ 291 (316)
T 3afi_E 216 ELPIAGEP--AD-VYEALQSAHAALAASSYPKLLFTGEPGALVSPE-FAERFAASLTRCALIRLGAGLHYLQEDHADAIG 291 (316)
T ss_dssp GSCBTTBS--HH-HHHHHHHHHHHHHHCCSCEEEEEEEECSSSCHH-HHHHHHHHSSSEEEEEEEEECSCHHHHHHHHHH
T ss_pred hccccccc--hh-hhhHHHHHHHhhhccCCCeEEEecCCCCccCHH-HHHHHHHhCCCCeEEEcCCCCCCchhhCHHHHH
Confidence 00000000 00 000011123456789999999999999999988 799999999999999999999999999999999
Q ss_pred HHHhhccccccc
Q 013862 226 TTIKGAGYYRRG 237 (435)
Q Consensus 226 ~~I~~~~Fl~~~ 237 (435)
+.|.+ |+.+.
T Consensus 292 ~~i~~--fl~~~ 301 (316)
T 3afi_E 292 RSVAG--WIAGI 301 (316)
T ss_dssp HHHHH--HHHHH
T ss_pred HHHHH--HHhhc
Confidence 99999 88643
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.4e-21 Score=177.60 Aligned_cols=207 Identities=10% Similarity=0.084 Sum_probs=121.4
Q ss_pred CccccccCCC----CCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccc
Q 013862 2 YGACIFQLQI----GHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSL 77 (435)
Q Consensus 2 yG~s~~p~~~----~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~ 77 (435)
||.|..+ .. .||++++++|+.++++++++ ++++|+||||||.+|+.+|.++|++|+++|+++++.......
T Consensus 66 ~G~S~~~-~~~~~~~~~~~~~a~dl~~ll~~l~~----~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~ 140 (294)
T 1ehy_A 66 FGDSEKP-DLNDLSKYSLDKAADDQAALLDALGI----EKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPV 140 (294)
T ss_dssp STTSCCC-CTTCGGGGCHHHHHHHHHHHHHHTTC----CCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC---
T ss_pred CCCCCCC-ccccccCcCHHHHHHHHHHHHHHcCC----CCEEEEEeChhHHHHHHHHHhChhheeEEEEecCCCCCcchh
Confidence 6888766 32 69999999999999999988 589999999999999999999999999999999753211110
Q ss_pred ccccc---ccccccccchhHHHHHHHHHhhcCCh---hHHHHHhhh-----hccchhHHHHHhHHhHHhhhcchhHHhcc
Q 013862 78 LQTIM---PIPAELMSGQMTLTLSYLLSLLTGDP---LKMAMDSIV-----KGLFLQSTIQERSQDFVAMSSYLPVLANI 146 (435)
Q Consensus 78 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (435)
..... ..+...... . ...... ..... ......... .....++....+....
T Consensus 141 ~~~~~~~~~~~~~~~~~--~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 202 (294)
T 1ehy_A 141 YFGLGHVHESWYSQFHQ--L-DMAVEV--VGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNC------------- 202 (294)
T ss_dssp --------CCHHHHHTT--C-HHHHHH--HTSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHH-------------
T ss_pred hccchhccCceEEEecC--c-chhHHH--hccchhHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHh-------------
Confidence 00000 000000000 0 000000 00000 000000000 0000011111111100
Q ss_pred CCchhhhhHHhhhhhh----hhhh-hhhcccccceEEEEeeCCCCCCCC-hhHHHHHHhhCCCceEEEeCCCCccccccC
Q 013862 147 LPKETLLWKLELLKSA----SAYA-NARLDAVKAQTLILCSGRDQLLPS-EEEGDRLCRALPNCQTRRFGGGGHFLFLED 220 (435)
Q Consensus 147 ~~~~~~~~~~~~~~~~----~~~~-~~~l~~i~~Pvlii~G~~D~~~~~-~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~ 220 (435)
............++.. .... ...+.++++|+|+|+|++|..++. . ..+.+.+.+|+++++++++|||++++|+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~ 281 (294)
T 1ehy_A 203 MKPDNIHGGFNYYRANIRPDAALWTDLDHTMSDLPVTMIWGLGDTCVPYAP-LIEFVPKYYSNYTMETIEDCGHFLMVEK 281 (294)
T ss_dssp TSTTHHHHHHHHHHHHSSSSCCCCCTGGGSCBCSCEEEEEECCSSCCTTHH-HHHHHHHHBSSEEEEEETTCCSCHHHHC
T ss_pred cCCcccchHHHHHHHHHhhhhhhcCCcccCcCCCCEEEEEeCCCCCcchHH-HHHHHHHHcCCCceEEeCCCCCChhhhC
Confidence 0000000000111100 0000 123558999999999999999885 4 5788888999999999999999999999
Q ss_pred chhHHHHHhhcccc
Q 013862 221 GVDLVTTIKGAGYY 234 (435)
Q Consensus 221 pe~~~~~I~~~~Fl 234 (435)
|+++++.|.+ |+
T Consensus 282 p~~~~~~i~~--fl 293 (294)
T 1ehy_A 282 PEIAIDRIKT--AF 293 (294)
T ss_dssp HHHHHHHHHH--HC
T ss_pred HHHHHHHHHH--Hh
Confidence 9999999999 76
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.87 E-value=8.8e-22 Score=182.03 Aligned_cols=219 Identities=14% Similarity=0.139 Sum_probs=125.2
Q ss_pred CccccccC---CCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccccc
Q 013862 2 YGACIFQL---QIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLL 78 (435)
Q Consensus 2 yG~s~~p~---~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~ 78 (435)
||.|...+ ...|+++++++|+.+++++++. ++++|+||||||.+|+.+|.++|++|.++|+++++........
T Consensus 93 ~G~S~~~~~~~~~~~~~~~~a~dl~~ll~~lg~----~~~~lvGhSmGG~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~ 168 (330)
T 3nwo_A 93 CGNSTHLPDAPADFWTPQLFVDEFHAVCTALGI----ERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPASMRLWSE 168 (330)
T ss_dssp STTSCCCTTSCGGGCCHHHHHHHHHHHHHHHTC----CSEEEEEETHHHHHHHHHHHTCCTTEEEEEEESCCSBHHHHHH
T ss_pred CCCCCCCCCCccccccHHHHHHHHHHHHHHcCC----CceEEEecCHHHHHHHHHHHhCCccceEEEEecCCcchHHHHH
Confidence 67776522 2358999999999999999988 5899999999999999999999999999999998753211000
Q ss_pred ccccccccccccchhHHHHHHHHHh-hcCChhHH-H-HHhhhh-----ccchhHHHHHhHHhHHhhhcchhHHhccCCch
Q 013862 79 QTIMPIPAELMSGQMTLTLSYLLSL-LTGDPLKM-A-MDSIVK-----GLFLQSTIQERSQDFVAMSSYLPVLANILPKE 150 (435)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~-~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (435)
..... ...+.......+...... ........ . ...... ...+.... ...............+. ...
T Consensus 169 -~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~ 242 (330)
T 3nwo_A 169 -AAGDL-RAQLPAETRAALDRHEAAGTITHPDYLQAAAEFYRRHVCRVVPTPQDFA-DSVAQMEAEPTVYHTMN---GPN 242 (330)
T ss_dssp -HHHHH-HHHSCHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHTCCSSSCCHHHH-HHHHHHHHSCHHHHHHT---CSC
T ss_pred -HHHHH-HHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHhhccccCCCHHHH-HHHHhhccchhhhhccc---Cch
Confidence 00000 000111000000000000 00000000 0 000000 00000000 00000000000000000 000
Q ss_pred hhhhHHhhhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhh
Q 013862 151 TLLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKG 230 (435)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~ 230 (435)
.+. ....+ ...+..+.+.++++|+|+|+|++|.++| . ..+.+.+.+|+++++++++|||++++|+|++|++.|.+
T Consensus 243 ~~~-~~~~~--~~~~~~~~l~~i~~P~Lvi~G~~D~~~p-~-~~~~~~~~ip~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 317 (330)
T 3nwo_A 243 EFH-VVGTL--GDWSVIDRLPDVTAPVLVIAGEHDEATP-K-TWQPFVDHIPDVRSHVFPGTSHCTHLEKPEEFRAVVAQ 317 (330)
T ss_dssp SSS-CCSGG--GGCBCGGGGGGCCSCEEEEEETTCSSCH-H-HHHHHHHHCSSEEEEEETTCCTTHHHHSHHHHHHHHHH
T ss_pred hhh-hhccc--cCCchhhhcccCCCCeEEEeeCCCccCh-H-HHHHHHHhCCCCcEEEeCCCCCchhhcCHHHHHHHHHH
Confidence 000 00000 0112245678899999999999999876 4 47889999999999999999999999999999999999
Q ss_pred ccccccc
Q 013862 231 AGYYRRG 237 (435)
Q Consensus 231 ~~Fl~~~ 237 (435)
||++.
T Consensus 318 --FL~~~ 322 (330)
T 3nwo_A 318 --FLHQH 322 (330)
T ss_dssp --HHHHH
T ss_pred --HHHhc
Confidence 88653
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.8e-21 Score=177.17 Aligned_cols=207 Identities=14% Similarity=0.100 Sum_probs=122.4
Q ss_pred CccccccCC-CCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccccccc
Q 013862 2 YGACIFQLQ-IGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQT 80 (435)
Q Consensus 2 yG~s~~p~~-~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~ 80 (435)
||.|..+.. ..|+++++++|+.++++++++ ++++|+||||||.+|+.+|.++|++|+++|++++.... ...
T Consensus 84 ~G~S~~~~~~~~~~~~~~a~dl~~ll~~l~~----~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~--~~~-- 155 (297)
T 2xt0_A 84 FGRSDKPTDDAVYTFGFHRRSLLAFLDALQL----ERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTALAV--GLS-- 155 (297)
T ss_dssp STTSCEESCGGGCCHHHHHHHHHHHHHHHTC----CSEEEEECHHHHHHHTTHHHHCTTSEEEEEEESCCCCS--SSC--
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHHHHHhCC----CCEEEEEECchHHHHHHHHHhChHHhcEEEEECCCCCc--ccC--
Confidence 788887765 579999999999999999988 58999999999999999999999999999999985311 000
Q ss_pred ccccccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhh--hcchhHHhccCCchhhhhHHhh
Q 013862 81 IMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAM--SSYLPVLANILPKETLLWKLEL 158 (435)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 158 (435)
. .... ....................... .....+....+....... ......+...........
T Consensus 156 ---~-----~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 221 (297)
T 2xt0_A 156 ---P-----GKGF-ESWRDFVANSPDLDVGKLMQRAI-PGITDAEVAAYDAPFPGPEFKAGVRRFPAIVPITPDME---- 221 (297)
T ss_dssp ---S-----CHHH-HHHHHHHHTCTTCCHHHHHHHHS-TTCCHHHHHHHHTTCSSGGGCHHHHHGGGGSCCSTTST----
T ss_pred ---C-----chhH-HHHHHHhhcccccchhHHHhccC-ccCCHHHHHHHhccccCcchhHHHHHHHHhCccccccc----
Confidence 0 0000 00000000000000000000000 000011111100000000 000000000000000000
Q ss_pred hhhhhhhhhhhcc-cccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEE--eCCCCccccccCchhHHHHHhhccccc
Q 013862 159 LKSASAYANARLD-AVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRR--FGGGGHFLFLEDGVDLVTTIKGAGYYR 235 (435)
Q Consensus 159 ~~~~~~~~~~~l~-~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~--i~~~gH~~~~e~pe~~~~~I~~~~Fl~ 235 (435)
.........+.+. ++++|+|+|+|++|.+++ . ..+.+.+.+|++++++ +++|||++++ +|++|++.|.+ |+.
T Consensus 222 ~~~~~~~~~~~l~~~i~~P~Lvi~G~~D~~~~-~-~~~~~~~~~p~~~~~~~~~~~~GH~~~~-~p~~~~~~i~~--fl~ 296 (297)
T 2xt0_A 222 GAEIGRQAMSFWSTQWSGPTFMAVGAQDPVLG-P-EVMGMLRQAIRGCPEPMIVEAGGHFVQE-HGEPIARAALA--AFG 296 (297)
T ss_dssp THHHHHHHHHHHHHTCCSCEEEEEETTCSSSS-H-HHHHHHHHHSTTCCCCEEETTCCSSGGG-GCHHHHHHHHH--HTT
T ss_pred hhhHHHHHHHHhhhccCCCeEEEEeCCCcccC-h-HHHHHHHhCCCCeeEEeccCCCCcCccc-CHHHHHHHHHH--HHh
Confidence 0000112235667 899999999999999998 7 6899999999987654 7899999999 99999999999 874
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A | Back alignment and structure |
|---|
Probab=99.87 E-value=5.4e-22 Score=181.72 Aligned_cols=213 Identities=16% Similarity=0.112 Sum_probs=124.9
Q ss_pred CccccccCC-CCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccccccc
Q 013862 2 YGACIFQLQ-IGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQT 80 (435)
Q Consensus 2 yG~s~~p~~-~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~ 80 (435)
||.|..|.. ..|+++++++|+.++++++++ ++++|+||||||.+|+.+|.++|++|+++|++++...........
T Consensus 85 ~G~S~~~~~~~~y~~~~~a~dl~~ll~~l~~----~~~~lvGhS~Gg~va~~~A~~~P~rv~~Lvl~~~~~~~~~~~~~~ 160 (310)
T 1b6g_A 85 FGKSDKPVDEEDYTFEFHRNFLLALIERLDL----RNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXLMTDPVTQPA 160 (310)
T ss_dssp STTSCEESCGGGCCHHHHHHHHHHHHHHHTC----CSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTH
T ss_pred CCCCCCCCCcCCcCHHHHHHHHHHHHHHcCC----CCEEEEEcChHHHHHHHHHHhChHhheEEEEeccccccCCccccc
Confidence 788887763 579999999999999999998 589999999999999999999999999999999854210000000
Q ss_pred ccccccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhh-
Q 013862 81 IMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELL- 159 (435)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 159 (435)
.... ......... ........ ...................+....+...... ... ...........
T Consensus 161 ~~~~-~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---------~~~~~~~~~~~~ 227 (310)
T 1b6g_A 161 FSAF-VTQPADGFT-AWKYDLVT-PSDLRLDQFMKRWAPTLTEAEASAYAAPFPD-TSY---------QAGVRKFPKMVA 227 (310)
T ss_dssp HHHT-TTSSTTTHH-HHHHHHHS-CSSCCHHHHHHHHSTTCCHHHHHHHHTTCSS-GGG---------CHHHHHHHHHHH
T ss_pred hhhh-hhccchHHH-HHHHHhcc-CchhhhhhHHhhcCCCCCHHHHHHHhcccCC-ccc---------hHHHHHHHHHhc
Confidence 0000 000000000 00000000 0000000000000000011111110000000 000 00000000000
Q ss_pred ------hhhhhhhhhhcc-cccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEe--CCCCccccccCchhHHHHHhh
Q 013862 160 ------KSASAYANARLD-AVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRF--GGGGHFLFLEDGVDLVTTIKG 230 (435)
Q Consensus 160 ------~~~~~~~~~~l~-~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i--~~~gH~~~~e~pe~~~~~I~~ 230 (435)
........+.+. ++++|||+|+|++|.+++ . ..+.+.+.+|+++++++ ++|||++++ +|++|++.|.+
T Consensus 228 ~~~~~~~~~~~~~~~~l~~~i~~P~Lvi~G~~D~~~~-~-~~~~~~~~ip~~~~~~i~~~~~GH~~~~-~p~~~~~~i~~ 304 (310)
T 1b6g_A 228 QRDQAXIDISTEAISFWQNDWNGQTFMAIGMKDKLLG-P-DVMYPMKALINGCPEPLEIADAGHFVQE-FGEQVAREALK 304 (310)
T ss_dssp SCCHHHHHHHHHHHHHHHHTCCSEEEEEEETTCSSSS-H-HHHHHHHHHSTTCCCCEEETTCCSCGGG-GHHHHHHHHHH
T ss_pred ccccchhhhhhhHhhhhhccccCceEEEeccCcchhh-h-HHHHHHHhcccccceeeecCCcccchhh-ChHHHHHHHHH
Confidence 000112235677 899999999999999999 7 68999999999998888 999999999 99999999999
Q ss_pred cccccc
Q 013862 231 AGYYRR 236 (435)
Q Consensus 231 ~~Fl~~ 236 (435)
|+.+
T Consensus 305 --Fl~~ 308 (310)
T 1b6g_A 305 --HFAE 308 (310)
T ss_dssp --HHHH
T ss_pred --HHhc
Confidence 8853
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.5e-21 Score=175.28 Aligned_cols=207 Identities=15% Similarity=0.100 Sum_probs=124.0
Q ss_pred Cccccc-cCCC-CCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccc
Q 013862 2 YGACIF-QLQI-GHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQ 79 (435)
Q Consensus 2 yG~s~~-p~~~-~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~ 79 (435)
+|.|.. +... .++++++++|+.+++++++. ++++|+||||||.+|+.+|.++|+ |+++|++++........ .
T Consensus 63 ~G~S~~~~~~~~~~~~~~~a~dl~~ll~~l~~----~~~~lvGhS~Gg~ia~~~a~~~p~-v~~lvl~~~~~~~~~~~-~ 136 (286)
T 2yys_A 63 SGRSLELPQDPRLFTVDALVEDTLLLAEALGV----ERFGLLAHGFGAVVALEVLRRFPQ-AEGAILLAPWVNFPWLA-A 136 (286)
T ss_dssp STTSCCCCSCGGGCCHHHHHHHHHHHHHHTTC----CSEEEEEETTHHHHHHHHHHHCTT-EEEEEEESCCCBHHHHH-H
T ss_pred CCCCCCCccCcccCcHHHHHHHHHHHHHHhCC----CcEEEEEeCHHHHHHHHHHHhCcc-hheEEEeCCccCcHHHH-H
Confidence 677875 4321 79999999999999999987 589999999999999999999999 99999999875211100 0
Q ss_pred ccccccc--ccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhH-HHHHhHHhHHhhhcchhHHhccCCchhhhhHH
Q 013862 80 TIMPIPA--ELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQS-TIQERSQDFVAMSSYLPVLANILPKETLLWKL 156 (435)
Q Consensus 80 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (435)
..... . ...... ...+...... ........ ... ...... ...... ................
T Consensus 137 ~~~~~-~~~~~~~~~-~~~~~~~~~~--~~~~~~~~-~~~-~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~ 200 (286)
T 2yys_A 137 RLAEA-AGLAPLPDP-EENLKEALKR--EEPKALFD-RLM-FPTPRGRMAYEWL----------AEGAGILGSDAPGLAF 200 (286)
T ss_dssp HHHHH-TTCCCCSCH-HHHHHHHHHH--SCHHHHHH-HHH-CSSHHHHHHHHHH----------HHHTTCCCCSHHHHHH
T ss_pred HHHHH-hccccchhH-HHHHHHHhcc--CChHHHHH-hhh-ccCCccccChHHH----------HHHHhhccccccchhh
Confidence 00000 0 000000 0001110000 00000000 000 000000 000000 0000111011111110
Q ss_pred hhhhhh-hhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhccccc
Q 013862 157 ELLKSA-SAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYR 235 (435)
Q Consensus 157 ~~~~~~-~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~ 235 (435)
.+... ..+..+.+.++++|+|+|+|++|.+++.+ .+.+.+ +|+++++++++|||++++|+|+++++.|.+ |+.
T Consensus 201 -~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~--~~~~~~-~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~--fl~ 274 (286)
T 2yys_A 201 -LRNGLWRLDYTPYLTPERRPLYVLVGERDGTSYPY--AEEVAS-RLRAPIRVLPEAGHYLWIDAPEAFEEAFKE--ALA 274 (286)
T ss_dssp -HHTTGGGCBCGGGCCCCSSCEEEEEETTCTTTTTT--HHHHHH-HHTCCEEEETTCCSSHHHHCHHHHHHHHHH--HHH
T ss_pred -cccccccCChhhhhhhcCCCEEEEEeCCCCcCCHh--HHHHHh-CCCCCEEEeCCCCCCcChhhHHHHHHHHHH--HHH
Confidence 11111 11234567889999999999999999886 778888 899999999999999999999999999999 886
Q ss_pred c
Q 013862 236 R 236 (435)
Q Consensus 236 ~ 236 (435)
+
T Consensus 275 ~ 275 (286)
T 2yys_A 275 A 275 (286)
T ss_dssp T
T ss_pred h
Confidence 4
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.87 E-value=6.5e-22 Score=177.34 Aligned_cols=206 Identities=17% Similarity=0.191 Sum_probs=124.8
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
+|.|..+....|+++++++|+.+++++++. ++++|+||||||.+|+.+|.++|++|+++|++++......... ..
T Consensus 53 ~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~----~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~-~~ 127 (269)
T 2xmz_A 53 HGEDQSSMDETWNFDYITTLLDRILDKYKD----KSITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKEEAN-QL 127 (269)
T ss_dssp STTCCCCTTSCCCHHHHHHHHHHHHGGGTT----SEEEEEEETHHHHHHHHHHHHCSSCCSEEEEESCCSCCSSHHH-HH
T ss_pred CCCCCCCCCCccCHHHHHHHHHHHHHHcCC----CcEEEEEECchHHHHHHHHHhCchheeeeEEEcCCcccCCchh-HH
Confidence 677776544368999999999999999987 5899999999999999999999999999999997643211100 00
Q ss_pred cccccccccchhHHH-----HHHHHHhhcCChhHHHHHhhhhc-cchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhH
Q 013862 82 MPIPAELMSGQMTLT-----LSYLLSLLTGDPLKMAMDSIVKG-LFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWK 155 (435)
Q Consensus 82 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (435)
... . .. ...... ............. +... ....+.......... . .........
T Consensus 128 ~~~-~-~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~----------~-~~~~~~~~~ 187 (269)
T 2xmz_A 128 ERR-L-VD-DARAKVLDIAGIELFVNDWEKLPL------FQSQLELPVEIQHQIRQQRL----------S-QSPHKMAKA 187 (269)
T ss_dssp HHH-H-HH-HHHHHHHHHHCHHHHHHHHTTSGG------GGGGGGSCHHHHHHHHHHHH----------T-SCHHHHHHH
T ss_pred HHh-h-hh-hHHHHhhccccHHHHHHHHHhCcc------ccccccCCHHHHHHHHHHHh----------c-cCcHHHHHH
Confidence 000 0 00 000000 0000000000000 0000 000111001000000 0 000111111
Q ss_pred Hhhhh-hhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhcccc
Q 013862 156 LELLK-SASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYY 234 (435)
Q Consensus 156 ~~~~~-~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl 234 (435)
...+. .......+.+.++++|+|+|+|++|.+++.. ..+ +.+.+|++++++++++||++++|+|+++++.|.+ |+
T Consensus 188 ~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~-~~~-~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~--fl 263 (269)
T 2xmz_A 188 LRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKFVQI-AKK-MANLIPNSKCKLISATGHTIHVEDSDEFDTMILG--FL 263 (269)
T ss_dssp HHHHSTTTSCCCGGGGGGCCSCEEEEEETTCHHHHHH-HHH-HHHHSTTEEEEEETTCCSCHHHHSHHHHHHHHHH--HH
T ss_pred HHHHHhccCccHHHHHHhcCCCEEEEEeCCCcccCHH-HHH-HHhhCCCcEEEEeCCCCCChhhcCHHHHHHHHHH--HH
Confidence 10000 0111223567889999999999999999877 444 8899999999999999999999999999999999 88
Q ss_pred cc
Q 013862 235 RR 236 (435)
Q Consensus 235 ~~ 236 (435)
++
T Consensus 264 ~~ 265 (269)
T 2xmz_A 264 KE 265 (269)
T ss_dssp HH
T ss_pred HH
Confidence 64
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A | Back alignment and structure |
|---|
Probab=99.87 E-value=5.7e-21 Score=173.70 Aligned_cols=215 Identities=13% Similarity=0.073 Sum_probs=127.5
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
+|.|..+ ...++++++++|+.+++++++.. ++++|+||||||.+|+.+|.++|++|+++|++++............
T Consensus 67 ~G~S~~~-~~~~~~~~~~~~l~~~l~~l~~~---~p~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 142 (301)
T 3kda_A 67 LGQSEPP-KTGYSGEQVAVYLHKLARQFSPD---RPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPIPDARIYRFPA 142 (301)
T ss_dssp STTCCCC-SSCSSHHHHHHHHHHHHHHHCSS---SCEEEEEETHHHHTTHHHHHHCGGGEEEEEEESSCCSSGGGGGSBS
T ss_pred CCCCCCC-CCCccHHHHHHHHHHHHHHcCCC---ccEEEEEeCccHHHHHHHHHhChhhccEEEEEccCCCCCCccchhh
Confidence 5777655 56789999999999999999873 3499999999999999999999999999999998753221111000
Q ss_pred cccccccccchhHHHH---HHHHHhhcCC-hhHHHHHhh-----hhccchhHHHHHhHHhHHhhhcchhHHhccCCchhh
Q 013862 82 MPIPAELMSGQMTLTL---SYLLSLLTGD-PLKMAMDSI-----VKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETL 152 (435)
Q Consensus 82 ~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (435)
... ............ ..+....... ......... .......+....+..... .....
T Consensus 143 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~ 208 (301)
T 3kda_A 143 FTA-QGESLVWHFSFFAADDRLAETLIAGKERFFLEHFIKSHASNTEVFSERLLDLYARSYA-------------KPHSL 208 (301)
T ss_dssp EET-TEECSSTHHHHHHCSTTHHHHHHTTCHHHHHHHHHHHTCSSGGGSCHHHHHHHHHHHT-------------SHHHH
T ss_pred hcc-hhhhhhhhHHHhhcCcchHHHHhccchHHHHHHHHHhccCCcccCCHHHHHHHHHHhc-------------ccccc
Confidence 000 000000000000 0000000000 000000000 000111111111111110 00101
Q ss_pred hhHHhhhhh------hhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHH
Q 013862 153 LWKLELLKS------ASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVT 226 (435)
Q Consensus 153 ~~~~~~~~~------~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~ 226 (435)
......++. ........+.++++|+|+++|++| ++.. ..+.+.+..+++++++++++||++++|+|+++++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D--~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~ 285 (301)
T 3kda_A 209 NASFEYYRALNESVRQNAELAKTRLQMPTMTLAGGGAGG--MGTF-QLEQMKAYAEDVEGHVLPGCGHWLPEECAAPMNR 285 (301)
T ss_dssp HHHHHHHHTHHHHHHHHHHHTTSCBCSCEEEEEECSTTS--CTTH-HHHHHHTTBSSEEEEEETTCCSCHHHHTHHHHHH
T ss_pred chHHHHHHhhccchhhcccchhhccccCcceEEEecCCC--CChh-HHHHHHhhcccCeEEEcCCCCcCchhhCHHHHHH
Confidence 111111111 111112344589999999999999 6666 6888999999999999999999999999999999
Q ss_pred HHhhccccccccc
Q 013862 227 TIKGAGYYRRGRI 239 (435)
Q Consensus 227 ~I~~~~Fl~~~~~ 239 (435)
.|.+ |++++..
T Consensus 286 ~i~~--~l~~~~~ 296 (301)
T 3kda_A 286 LVID--FLSRGRH 296 (301)
T ss_dssp HHHH--HHTTSCC
T ss_pred HHHH--HHhhCch
Confidence 9999 9987764
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=2.9e-21 Score=173.99 Aligned_cols=204 Identities=16% Similarity=0.168 Sum_probs=124.4
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCC-ceeEEEEecCCcccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPD-MDLVLILANPATSFRKSLLQT 80 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~-~v~~lVli~~~~~~~~~~~~~ 80 (435)
+|.|..+. ..++++++++|+.+++++++. ++++|+||||||.+++.+|.++|+ +|+++|++++...........
T Consensus 61 ~G~S~~~~-~~~~~~~~~~dl~~~l~~l~~----~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~ 135 (279)
T 1hkh_A 61 FGGSSKVN-TGYDYDTFAADLHTVLETLDL----RDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDN 135 (279)
T ss_dssp STTSCCCS-SCCSHHHHHHHHHHHHHHHTC----CSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTB
T ss_pred CCCCCCCC-CCCCHHHHHHHHHHHHHhcCC----CceEEEEeChhHHHHHHHHHHcCccceeeEEEEccCCcccccCcCC
Confidence 57776544 568999999999999999987 589999999999999999999999 999999999854321111000
Q ss_pred ccccccccccchhHHHHHHHHHhhcCChhHHHH----Hhhh-----hccchhHHHHHhHHhHHhhhcchhHHhccCCchh
Q 013862 81 IMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAM----DSIV-----KGLFLQSTIQERSQDFVAMSSYLPVLANILPKET 151 (435)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (435)
........ ...+............. .... ......+......... ... ....
T Consensus 136 -----~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~-~~~~ 196 (279)
T 1hkh_A 136 -----PEGVPQEV---FDGIEAAAKGDRFAWFTDFYKNFYNLDENLGSRISEQAVTGSWNVA----------IGS-APVA 196 (279)
T ss_dssp -----TTSBCHHH---HHHHHHHHHHCHHHHHHHHHHHHHTHHHHBTTTBCHHHHHHHHHHH----------HTS-CTTH
T ss_pred -----cCCCcHHH---HHHHHHHhhhhhhhhHHHHHhhhhhcccCCcccccHHHHHhhhhhh----------ccC-cHHH
Confidence 00000000 00000000000000000 0000 0000111111111000 000 0000
Q ss_pred hhhHHhhhhhhhhhhhhhcccc---cceEEEEeeCCCCCCCChhHH-HHHHhhCCCceEEEeCCCCccccccCchhHHHH
Q 013862 152 LLWKLELLKSASAYANARLDAV---KAQTLILCSGRDQLLPSEEEG-DRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTT 227 (435)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~l~~i---~~Pvlii~G~~D~~~~~~~~~-~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~ 227 (435)
. ...+.....+....+.++ ++|+|+|+|++|.++|.+ .. +.+.+.++++++++++++||+++.|+|+++++.
T Consensus 197 ~---~~~~~~~~~~~~~~l~~i~~~~~P~lii~G~~D~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~ 272 (279)
T 1hkh_A 197 A---YAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILPID-ATARRFHQAVPEADYVEVEGAPHGLLWTHADEVNAA 272 (279)
T ss_dssp H---HHTHHHHTCBCHHHHHHHHHHCCCEEEEEETTCSSSCTT-TTHHHHHHHCTTSEEEEETTCCTTHHHHTHHHHHHH
T ss_pred H---HHHHHHHhhchhhhHHHhccCCCCEEEEEcCCCccCChH-HHHHHHHHhCCCeeEEEeCCCCccchhcCHHHHHHH
Confidence 0 001111111123456677 999999999999999988 56 889999999999999999999999999999999
Q ss_pred Hhhccccc
Q 013862 228 IKGAGYYR 235 (435)
Q Consensus 228 I~~~~Fl~ 235 (435)
|.+ |+.
T Consensus 273 i~~--fl~ 278 (279)
T 1hkh_A 273 LKT--FLA 278 (279)
T ss_dssp HHH--HHH
T ss_pred HHH--Hhh
Confidence 999 774
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=99.86 E-value=4.9e-21 Score=174.19 Aligned_cols=205 Identities=16% Similarity=0.211 Sum_probs=127.7
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
+|.|. +....++++++++|+.+++++++.. ++++|+||||||.+|+.+|.++|++|+++|++++....... ....
T Consensus 76 ~G~S~-~~~~~~~~~~~~~dl~~~l~~l~~~---~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~-~~~~ 150 (296)
T 1j1i_A 76 FGKTA-KPDIEYTQDRRIRHLHDFIKAMNFD---GKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEI-HEDL 150 (296)
T ss_dssp STTSC-CCSSCCCHHHHHHHHHHHHHHSCCS---SCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC------
T ss_pred CCCCC-CCCCCCCHHHHHHHHHHHHHhcCCC---CCeEEEEEChhHHHHHHHHHhChHhhhEEEEECCCCCCCCC-CchH
Confidence 67887 5555799999999999999998762 48999999999999999999999999999999987532111 0000
Q ss_pred cccccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhh
Q 013862 82 MPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKS 161 (435)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (435)
... ... ... .............+. .....+........... ...... +.........
T Consensus 151 ~~~-~~~-~~~-~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~-~~~~~~---------~~~~~~~~~~ 207 (296)
T 1j1i_A 151 RPI-INY-DFT-REGMVHLVKALTNDG----------FKIDDAMINSRYTYATD-EATRKA---------YVATMQWIRE 207 (296)
T ss_dssp ------C-CSC-HHHHHHHHHHHSCTT----------CCCCHHHHHHHHHHHHS-HHHHHH---------HHHHHHHHHH
T ss_pred HHH-hcc-cCC-chHHHHHHHHhccCc----------ccccHHHHHHHHHHhhC-cchhhH---------HHHHHHHHHh
Confidence 000 000 000 011111111111110 00001111111100000 000000 0000000000
Q ss_pred --hhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhccccccc
Q 013862 162 --ASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRRG 237 (435)
Q Consensus 162 --~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~~ 237 (435)
........+.++++|+|+|+|++|.+++.+ ..+.+.+.++++++++++++||++++|+|+++++.|.+ |+.+.
T Consensus 208 ~~~~~~~~~~l~~i~~P~Lii~G~~D~~~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~--fl~~~ 282 (296)
T 1j1i_A 208 QGGLFYDPEFIRKVQVPTLVVQGKDDKVVPVE-TAYKFLDLIDDSWGYIIPHCGHWAMIEHPEDFANATLS--FLSLR 282 (296)
T ss_dssp HTSSBCCHHHHTTCCSCEEEEEETTCSSSCHH-HHHHHHHHCTTEEEEEESSCCSCHHHHSHHHHHHHHHH--HHHHC
T ss_pred cccccccHHHhhcCCCCEEEEEECCCcccCHH-HHHHHHHHCCCCEEEEECCCCCCchhcCHHHHHHHHHH--HHhcc
Confidence 000112456789999999999999999998 78999999999999999999999999999999999999 88654
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.86 E-value=8e-21 Score=170.56 Aligned_cols=208 Identities=13% Similarity=0.102 Sum_probs=122.4
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhC-CCceeEEEEecCCcccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARN-PDMDLVLILANPATSFRKSLLQT 80 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~-p~~v~~lVli~~~~~~~~~~~~~ 80 (435)
+|.|..+ ...++++++++|+.+++++++. ++++|+||||||.+++.+|+++ |++|+++|++++...........
T Consensus 57 ~G~S~~~-~~~~~~~~~~~dl~~~l~~l~~----~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~ 131 (274)
T 1a8q_A 57 HGHSTPV-WDGYDFDTFADDLNDLLTDLDL----RDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKN 131 (274)
T ss_dssp STTSCCC-SSCCSHHHHHHHHHHHHHHTTC----CSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSC
T ss_pred CCCCCCC-CCCCcHHHHHHHHHHHHHHcCC----CceEEEEeCccHHHHHHHHHHhhhHheeeeeEecCCCccccccccC
Confidence 5777644 3568999999999999999987 4899999999999999988876 99999999999764221110000
Q ss_pred ccccccccccchhHHHHHHHHHhhcCChhHHHH-Hhhh----hccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhH
Q 013862 81 IMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAM-DSIV----KGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWK 155 (435)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (435)
...........+................ .... ................ .. ......
T Consensus 132 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~-~~~~~~ 192 (274)
T 1a8q_A 132 -----PDGVPDEVFDALKNGVLTERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMA-------------MA-QTIEGG 192 (274)
T ss_dssp -----TTSBCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSTTCCCCHHHHHHHHHHH-------------TT-SCHHHH
T ss_pred -----cccchHHHHHHHHHHhhccHHHHHHHhcccccccccccccccHHHHHHHHHHh-------------hh-cChHHH
Confidence 0000100000000000000000000000 0000 0000011111100000 00 000000
Q ss_pred Hhhhhhh-hhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCcccccc--CchhHHHHHhhcc
Q 013862 156 LELLKSA-SAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLE--DGVDLVTTIKGAG 232 (435)
Q Consensus 156 ~~~~~~~-~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e--~pe~~~~~I~~~~ 232 (435)
....... ..+..+.+.++++|+|+|+|++|.+++.+...+.+.+..+++++++++++||+++.| +|+++++.|.+
T Consensus 193 ~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~~~p~~~~~~i~~-- 270 (274)
T 1a8q_A 193 VRCVDAFGYTDFTEDLKKFDIPTLVVHGDDDQVVPIDATGRKSAQIIPNAELKVYEGSSHGIAMVPGDKEKFNRDLLE-- 270 (274)
T ss_dssp HHHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTTTTSTTHHHHHHHHHHH--
T ss_pred HHHHhhhhcCcHHHHhhcCCCCEEEEecCcCCCCCcHHHHHHHHhhCCCceEEEECCCCCceecccCCHHHHHHHHHH--
Confidence 0111111 112235678899999999999999999873356677889999999999999999999 99999999999
Q ss_pred ccc
Q 013862 233 YYR 235 (435)
Q Consensus 233 Fl~ 235 (435)
|+.
T Consensus 271 fl~ 273 (274)
T 1a8q_A 271 FLN 273 (274)
T ss_dssp HHT
T ss_pred Hhc
Confidence 874
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A | Back alignment and structure |
|---|
Probab=99.86 E-value=7.1e-21 Score=171.21 Aligned_cols=205 Identities=13% Similarity=0.078 Sum_probs=123.3
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhC-CCceeEEEEecCCcccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARN-PDMDLVLILANPATSFRKSLLQT 80 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~-p~~v~~lVli~~~~~~~~~~~~~ 80 (435)
+|.|..+ ...++++++++|+.+++++++. ++++|+||||||.+|+.+|+++ |++|+++|++++...........
T Consensus 60 ~G~S~~~-~~~~~~~~~~~d~~~~l~~l~~----~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~ 134 (276)
T 1zoi_A 60 HGRSSQV-WDGHDMDHYADDVAAVVAHLGI----QGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQTPGN 134 (276)
T ss_dssp STTSCCC-SSCCSHHHHHHHHHHHHHHHTC----TTCEEEEETHHHHHHHHHHHHCTTSCCCCEEEESCCCSCCBCCSSC
T ss_pred CCCCCCC-CCCCCHHHHHHHHHHHHHHhCC----CceEEEEECccHHHHHHHHHHhCHHheeeeEEecCCCccccccccc
Confidence 6777654 3568999999999999999987 4899999999999999998887 99999999999764321110000
Q ss_pred ccccccccccchhHHHHHHHHHhhcCChhHHHHHh-----hh----hccchhHHHHHhHHhHHhhhcchhHHhccCCchh
Q 013862 81 IMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDS-----IV----KGLFLQSTIQERSQDFVAMSSYLPVLANILPKET 151 (435)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (435)
...........+..... .......... .. .....+........... . ..
T Consensus 135 -----~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~--~~--- 192 (276)
T 1zoi_A 135 -----PGGLPKSVFDGFQAQVA---SNRAQFYRDVPAGPFYGYNRPGVEASEGIIGNWWRQGM---------I--GS--- 192 (276)
T ss_dssp -----TTSBCHHHHHHHHHHHH---HCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHH---------H--SC---
T ss_pred -----cccccHHHHHHHHHHHH---HhHHHHHHHhhhccccccccccccccHHHHHHHHhhhh---------h--hh---
Confidence 00000000000000000 0000000000 00 00000111111110000 0 00
Q ss_pred hhhHHhhhhhh-hhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhh
Q 013862 152 LLWKLELLKSA-SAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKG 230 (435)
Q Consensus 152 ~~~~~~~~~~~-~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~ 230 (435)
.......+... ..+..+.+.++++|+|+|+|++|.++|.+...+.+.+.++++++++++++||++++|+|+++++.|.+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 272 (276)
T 1zoi_A 193 AKAHYDGIVAFSQTDFTEDLKGIQQPVLVMHGDDDQIVPYENSGVLSAKLLPNGALKTYKGYPHGMPTTHADVINADLLA 272 (276)
T ss_dssp HHHHHHHHHHHHSCCCHHHHHHCCSCEEEEEETTCSSSCSTTTHHHHHHHSTTEEEEEETTCCTTHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccchhhhccccCCCEEEEEcCCCcccChHHHHHHHHhhCCCceEEEcCCCCCchhhhCHHHHHHHHHH
Confidence 00000011000 11223567789999999999999999987335667788999999999999999999999999999999
Q ss_pred ccccc
Q 013862 231 AGYYR 235 (435)
Q Consensus 231 ~~Fl~ 235 (435)
|+.
T Consensus 273 --fl~ 275 (276)
T 1zoi_A 273 --FIR 275 (276)
T ss_dssp --HHT
T ss_pred --Hhc
Confidence 774
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A | Back alignment and structure |
|---|
Probab=99.86 E-value=1.1e-20 Score=167.69 Aligned_cols=188 Identities=16% Similarity=0.126 Sum_probs=120.7
Q ss_pred CccccccCCCCCC---hHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccccc
Q 013862 2 YGACIFQLQIGHH---FTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLL 78 (435)
Q Consensus 2 yG~s~~p~~~~~s---~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~ 78 (435)
+|.|..+ ...++ +++.++|+.+++++++. ++++|+||||||.+|+.+|.++|++|+++|++++.........
T Consensus 62 ~G~S~~~-~~~~~~~~~~~~~~~~~~~l~~l~~----~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 136 (254)
T 2ocg_A 62 YGHSRPP-DRDFPADFFERDAKDAVDLMKALKF----KKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYVTDEDS 136 (254)
T ss_dssp STTCCSS-CCCCCTTHHHHHHHHHHHHHHHTTC----SSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHH
T ss_pred CCCCCCC-CCCCChHHHHHHHHHHHHHHHHhCC----CCEEEEEECHhHHHHHHHHHHChHHhhheeEeccccccChhhH
Confidence 5777644 34567 78889999999999876 5899999999999999999999999999999998643221100
Q ss_pred ccccccccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhh
Q 013862 79 QTIMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLEL 158 (435)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (435)
.... . ......... ......... . . ............ .... ..
T Consensus 137 ~~~~-~-~~~~~~~~~-~~~~~~~~~-----------~----~-~~~~~~~~~~~~------~~~~------------~~ 179 (254)
T 2ocg_A 137 MIYE-G-IRDVSKWSE-RTRKPLEAL-----------Y----G-YDYFARTCEKWV------DGIR------------QF 179 (254)
T ss_dssp HHHH-T-TSCGGGSCH-HHHHHHHHH-----------H----C-HHHHHHHHHHHH------HHHH------------GG
T ss_pred HHHH-H-HHHHHHHHH-HhHHHHHHH-----------h----c-chhhHHHHHHHH------HHHH------------HH
Confidence 0000 0 000000000 000000000 0 0 000000000000 0000 00
Q ss_pred hh-hhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhcccc
Q 013862 159 LK-SASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYY 234 (435)
Q Consensus 159 ~~-~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl 234 (435)
.. .......+.+.++++|+|+++|++|.++|.+ ..+.+.+.+|++++++++++||+++.|+|+++++.|.+ |+
T Consensus 180 ~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~--fl 253 (254)
T 2ocg_A 180 KHLPDGNICRHLLPRVQCPALIVHGEKDPLVPRF-HADFIHKHVKGSRLHLMPEGKHNLHLRFADEFNKLAED--FL 253 (254)
T ss_dssp GGSGGGBSSGGGGGGCCSCEEEEEETTCSSSCHH-HHHHHHHHSTTCEEEEETTCCTTHHHHTHHHHHHHHHH--HH
T ss_pred HhccCCchhhhhhhcccCCEEEEecCCCccCCHH-HHHHHHHhCCCCEEEEcCCCCCchhhhCHHHHHHHHHH--Hh
Confidence 00 0001123567889999999999999999998 78999999999999999999999999999999999999 76
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A | Back alignment and structure |
|---|
Probab=99.86 E-value=1.6e-21 Score=177.02 Aligned_cols=217 Identities=18% Similarity=0.137 Sum_probs=129.2
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
+|.|..+.. .++++++++|+.+++++++. ++++|+||||||.+|+.+|.++|++|+++|++++.........
T Consensus 69 ~G~s~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~--- 140 (299)
T 3g9x_A 69 MGKSDKPDL-DYFFDDHVRYLDAFIEALGL----EEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPFPTWDE--- 140 (299)
T ss_dssp STTSCCCCC-CCCHHHHHHHHHHHHHHTTC----CSEEEEEEHHHHHHHHHHHHHSGGGEEEEEEEEECCCBSSGGG---
T ss_pred CCCCCCCCC-cccHHHHHHHHHHHHHHhCC----CcEEEEEeCccHHHHHHHHHhcchheeEEEEecCCcchhhhhh---
Confidence 567765554 79999999999999999977 4899999999999999999999999999999995543321110
Q ss_pred cccccccccchhHHHHHHHH-----HhhcCChhHHHH---HhhhhccchhHHHHHhHHhHHhhhcc--hhHHhccCCchh
Q 013862 82 MPIPAELMSGQMTLTLSYLL-----SLLTGDPLKMAM---DSIVKGLFLQSTIQERSQDFVAMSSY--LPVLANILPKET 151 (435)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 151 (435)
...........+. ............ ...............+.......... ............
T Consensus 141 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (299)
T 3g9x_A 141 -------WPEFARETFQAFRTADVGRELIIDQNAFIEGALPKCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNELPIAG 213 (299)
T ss_dssp -------SCGGGHHHHHHHTSSSHHHHHHTTSCHHHHTHHHHTCSSCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTT
T ss_pred -------cchHHHHHHHHHcCCCcchhhhccchhhHHHhhhhhhccCCCHHHHHHHHHHhccccccchhhhhhhhhhhcc
Confidence 0000000000000 000000000000 00000001111111111100000000 000000000000
Q ss_pred hhhHHhhhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhc
Q 013862 152 LLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGA 231 (435)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~ 231 (435)
... ............+.++++|+++++|++|.+++++ ..+.+.+.++++++++++++||++++|+|+++++.|.+
T Consensus 214 ~~~---~~~~~~~~~~~~l~~i~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~- 288 (299)
T 3g9x_A 214 EPA---NIVALVEAYMNWLHQSPVPKLLFWGTPGVLIPPA-EAARLAESLPNCKTVDIGPGLHYLQEDNPDLIGSEIAR- 288 (299)
T ss_dssp BSH---HHHHHHHHHHHHHHHCCSCEEEEEEEECSSSCHH-HHHHHHHHSTTEEEEEEEEESSCHHHHCHHHHHHHHHH-
T ss_pred ccc---hhhhhhhhhhhhcccCCCCeEEEecCCCCCCCHH-HHHHHHhhCCCCeEEEeCCCCCcchhcCHHHHHHHHHH-
Confidence 000 0011111234557889999999999999999999 79999999999999999999999999999999999999
Q ss_pred cccccccc
Q 013862 232 GYYRRGRI 239 (435)
Q Consensus 232 ~Fl~~~~~ 239 (435)
|+.....
T Consensus 289 -~~~~~~~ 295 (299)
T 3g9x_A 289 -WLPALHH 295 (299)
T ss_dssp -HSGGGCC
T ss_pred -HHhhhhh
Confidence 7765543
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.86 E-value=2e-20 Score=168.05 Aligned_cols=205 Identities=13% Similarity=0.091 Sum_probs=122.6
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhC-CCceeEEEEecCCcccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARN-PDMDLVLILANPATSFRKSLLQT 80 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~-p~~v~~lVli~~~~~~~~~~~~~ 80 (435)
+|.|..+ ...++++++++|+.+++++++. ++++|+||||||.+++.+++++ |++|+++|++++...........
T Consensus 59 ~G~S~~~-~~~~~~~~~~~dl~~~l~~l~~----~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~ 133 (275)
T 1a88_A 59 HGRSDQP-STGHDMDTYAADVAALTEALDL----RGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTN 133 (275)
T ss_dssp STTSCCC-SSCCSHHHHHHHHHHHHHHHTC----CSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTB
T ss_pred CCCCCCC-CCCCCHHHHHHHHHHHHHHcCC----CceEEEEeccchHHHHHHHHHhCchheEEEEEecCCCcccccCccC
Confidence 5777644 3468999999999999999987 4899999999999999988887 99999999999764321110000
Q ss_pred ccccccccccchhHHHHHHHHHhhcCChhHHHHHhh-----h----hccchhHHHHHhHHhHHhhhcchhHHhccCCchh
Q 013862 81 IMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSI-----V----KGLFLQSTIQERSQDFVAMSSYLPVLANILPKET 151 (435)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (435)
................. ........... . .....+........... . ..
T Consensus 134 -----~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~--~~--- 191 (275)
T 1a88_A 134 -----PDGLPLEVFDEFRAALA---ANRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGM---------M--GA--- 191 (275)
T ss_dssp -----TTSBCHHHHHHHHHHHH---HCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHH---------H--SC---
T ss_pred -----cccCCHHHHHHHHHHHh---hhHHHHHHhhhccccccccCcccccCHHHHHHHHHHhh---------h--cc---
Confidence 00001000000000000 00000000000 0 00000111111110000 0 00
Q ss_pred hhhHHhhhhhh-hhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhh
Q 013862 152 LLWKLELLKSA-SAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKG 230 (435)
Q Consensus 152 ~~~~~~~~~~~-~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~ 230 (435)
.......+... ..+..+.+.++++|+|+|+|++|.+++.+...+.+.+..+++++++++++||+++.|+|+++++.|.+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~ 271 (275)
T 1a88_A 192 ANAHYECIAAFSETDFTDDLKRIDVPVLVAHGTDDQVVPYADAAPKSAELLANATLKSYEGLPHGMLSTHPEVLNPDLLA 271 (275)
T ss_dssp HHHHHHHHHHHHHCCCHHHHHHCCSCEEEEEETTCSSSCSTTTHHHHHHHSTTEEEEEETTCCTTHHHHCHHHHHHHHHH
T ss_pred hHhHHHHHhhhhhcccccccccCCCCEEEEecCCCccCCcHHHHHHHHhhCCCcEEEEcCCCCccHHHhCHHHHHHHHHH
Confidence 00000011000 11223467789999999999999999987335667788899999999999999999999999999999
Q ss_pred ccccc
Q 013862 231 AGYYR 235 (435)
Q Consensus 231 ~~Fl~ 235 (435)
|+.
T Consensus 272 --fl~ 274 (275)
T 1a88_A 272 --FVK 274 (275)
T ss_dssp --HHH
T ss_pred --Hhh
Confidence 774
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=6.4e-21 Score=170.42 Aligned_cols=208 Identities=12% Similarity=0.092 Sum_probs=118.7
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
+|.|..++...++++++++|+.+++++++. .++++|+||||||.+++.+|.++|++|+++|++++.........
T Consensus 48 ~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~---~~~~~lvGhSmGG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~--- 121 (264)
T 2wfl_A 48 AGINPRRLDEIHTFRDYSEPLMEVMASIPP---DEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSL--- 121 (264)
T ss_dssp STTCSCCGGGCCSHHHHHHHHHHHHHHSCT---TCCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCCCCTTSCT---
T ss_pred CCCCCCCcccccCHHHHHHHHHHHHHHhCC---CCCeEEEEeChHHHHHHHHHHhChhhhceeEEEeeccCCCCcch---
Confidence 577765555568999999999999999952 15899999999999999999999999999999997532111000
Q ss_pred cccccccccchhHHHHHHHHHhhcCC-hhHHHHHhh-------hhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhh
Q 013862 82 MPIPAELMSGQMTLTLSYLLSLLTGD-PLKMAMDSI-------VKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLL 153 (435)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (435)
.. ....+....... ......... ................... ................
T Consensus 122 ---------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~- 187 (264)
T 2wfl_A 122 ---------TY---PFEKYNEKCPADMMLDSQFSTYGNPENPGMSMILGPQFMALKMFQNCS-VEDLELAKMLTRPGSL- 187 (264)
T ss_dssp ---------TH---HHHHHHHHSCTTTTTTCEEEEESCTTSCEEEEECCHHHHHHHTSTTSC-HHHHHHHHHHCCCEEC-
T ss_pred ---------hh---HHHHhhhcCcchhhhhhhhhhccCCCCCcchhhhhHHHHHHHHhcCCC-HHHHHHHHhccCCCcc-
Confidence 00 000000000000 000000000 0000000000000000000 0000000000000000
Q ss_pred hHHhhhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhccc
Q 013862 154 WKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGY 233 (435)
Q Consensus 154 ~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~F 233 (435)
.... +......... ...++|+|+|+|++|.+++.+ ..+.+.+.+|+++++++++|||++++|+|++|++.|.+ |
T Consensus 188 ~~~~-~~~~~~~~~~--~~~~~P~l~i~G~~D~~~~~~-~~~~~~~~~p~~~~~~i~~~gH~~~~e~P~~~~~~l~~--f 261 (264)
T 2wfl_A 188 FFQD-LAKAKKFSTE--RYGSVKRAYIFCNEDKSFPVE-FQKWFVESVGADKVKEIKEADHMGMLSQPREVCKCLLD--I 261 (264)
T ss_dssp CHHH-HTTSCCCCTT--TGGGSCEEEEEETTCSSSCHH-HHHHHHHHHCCSEEEEETTCCSCHHHHSHHHHHHHHHH--H
T ss_pred cccc-cccccccChH--HhCCCCeEEEEeCCcCCCCHH-HHHHHHHhCCCceEEEeCCCCCchhhcCHHHHHHHHHH--H
Confidence 0000 0000000001 123689999999999999998 78899999999999999999999999999999999999 7
Q ss_pred cc
Q 013862 234 YR 235 (435)
Q Consensus 234 l~ 235 (435)
++
T Consensus 262 ~~ 263 (264)
T 2wfl_A 262 SD 263 (264)
T ss_dssp HC
T ss_pred hh
Confidence 64
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... | Back alignment and structure |
|---|
Probab=99.86 E-value=4.2e-21 Score=170.87 Aligned_cols=206 Identities=11% Similarity=0.043 Sum_probs=119.5
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
+|.|..++...||++++++|+.+++++++. .++++||||||||.+++.+|.++|++|+++|++++.........
T Consensus 41 ~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~---~~~~~lvGhSmGG~va~~~a~~~p~~v~~lVl~~~~~~~~~~~~--- 114 (257)
T 3c6x_A 41 SGVDPRQIEEIGSFDEYSEPLLTFLEALPP---GEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCP--- 114 (257)
T ss_dssp STTCSCCGGGCCSHHHHTHHHHHHHHTSCT---TCCEEEEEEETHHHHHHHHHHHHGGGEEEEEEEEECCCCSSSCT---
T ss_pred CCCCCCCcccccCHHHHHHHHHHHHHhccc---cCCeEEEEECcchHHHHHHHHhCchhhheEEEEecccCCCCCcc---
Confidence 577765555568999999999999999852 15899999999999999999999999999999997532111000
Q ss_pred cccccccccchhHHHHHHHHHhhcCChhHHHHHhh-------hhccchhHHHHHhHHhHHhhhcchhHHhccC-Cchhhh
Q 013862 82 MPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSI-------VKGLFLQSTIQERSQDFVAMSSYLPVLANIL-PKETLL 153 (435)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 153 (435)
... ........ ........... ................... ........... ......
T Consensus 115 ---------~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 180 (257)
T 3c6x_A 115 ---------SYV---VDKLMEVF-PDWKDTTYFTYTKDGKEITGLKLGFTLLRENLYTLCG-PEEYELAKMLTRKGSLFQ 180 (257)
T ss_dssp ---------THH---HHHHHHHS-CCCTTCEEEEEEETTEEEEEEECCHHHHHHHTSTTSC-HHHHHHHHHHCCCBCCCH
T ss_pred ---------hhH---HHHHhhcC-cchhhhhhhhccCCCCccccccccHHHHHHHHhcCCC-HHHHHHHHHhcCCCccch
Confidence 000 00000000 00000000000 0000000000000000000 00000000000 000000
Q ss_pred hHHhhhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhccc
Q 013862 154 WKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGY 233 (435)
Q Consensus 154 ~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~F 233 (435)
.. +.......... ..++|+|+|+|++|.++|+. .++.+.+.+|+++++++++|||++++|+|++|++.|.+ |
T Consensus 181 ~~---~~~~~~~~~~~--~~~~P~l~i~G~~D~~~p~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~P~~~~~~l~~--f 252 (257)
T 3c6x_A 181 NI---LAKRPFFTKEG--YGSIKKIYVWTDQDEIFLPE-FQLWQIENYKPDKVYKVEGGDHKLQLTKTKEIAEILQE--V 252 (257)
T ss_dssp HH---HHHSCCCCTTT--GGGSCEEEEECTTCSSSCHH-HHHHHHHHSCCSEEEECCSCCSCHHHHSHHHHHHHHHH--H
T ss_pred hh---hccccccChhh--cCcccEEEEEeCCCcccCHH-HHHHHHHHCCCCeEEEeCCCCCCcccCCHHHHHHHHHH--H
Confidence 00 00000000011 13689999999999999998 78999999999999999999999999999999999999 8
Q ss_pred cc
Q 013862 234 YR 235 (435)
Q Consensus 234 l~ 235 (435)
++
T Consensus 253 ~~ 254 (257)
T 3c6x_A 253 AD 254 (257)
T ss_dssp HH
T ss_pred HH
Confidence 75
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.86 E-value=8.2e-21 Score=170.17 Aligned_cols=214 Identities=16% Similarity=0.103 Sum_probs=130.7
Q ss_pred CccccccC-CCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccccccc
Q 013862 2 YGACIFQL-QIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQT 80 (435)
Q Consensus 2 yG~s~~p~-~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~ 80 (435)
+|.|..+. ...++++++++|+.+++++++. ++++|+||||||.+++.+|.++|++|+++|++++...........
T Consensus 60 ~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~ 135 (278)
T 3oos_A 60 CGNSDSAKNDSEYSMTETIKDLEAIREALYI----NKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHKD 135 (278)
T ss_dssp STTSCCCSSGGGGSHHHHHHHHHHHHHHTTC----SCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBGGGGGSTT
T ss_pred CCCCCCCCCcccCcHHHHHHHHHHHHHHhCC----CeEEEEeecccHHHHHHHHHhCchhhCeEEEecCccccccccccc
Confidence 57776654 3568999999999999999987 489999999999999999999999999999999986522111111
Q ss_pred ccccccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchh-HHhccCCchhhhhHHhhh
Q 013862 81 IMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLP-VLANILPKETLLWKLELL 159 (435)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 159 (435)
. ............................. ................... .+...............+
T Consensus 136 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (278)
T 3oos_A 136 S----IYCSKNVKFNRIVSIMNALNDDSTVQEER--------KALSREWALMSFYSEEKLEEALKLPNSGKTVGNRLNYF 203 (278)
T ss_dssp S----TTSTTSTTHHHHHHHHHHHTCTTSCHHHH--------HHHHHHHHHHHCSCHHHHHHHTTSCCCCEECHHHHHHH
T ss_pred h----hhhhhchhHHHHHHHHHhhcccccCchHH--------HHHHHHHhhcccCCcHHHHHHhhccccchhHHHHHHHh
Confidence 1 11111111112222222221111000000 0000000000000000000 011111111111111111
Q ss_pred h---hhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhcccc
Q 013862 160 K---SASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYY 234 (435)
Q Consensus 160 ~---~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl 234 (435)
. ....+....+.++++|+++++|++|.+++.+ ..+.+.+.++++++++++++||+++.|+|+++++.|.+ ||
T Consensus 204 ~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~--fl 278 (278)
T 3oos_A 204 RQVEYKDYDVRQKLKFVKIPSFIYCGKHDVQCPYI-FSCEIANLIPNATLTKFEESNHNPFVEEIDKFNQFVND--TL 278 (278)
T ss_dssp HHTTGGGCBCHHHHTTCCSCEEEEEETTCSSSCHH-HHHHHHHHSTTEEEEEETTCSSCHHHHSHHHHHHHHHH--TC
T ss_pred hhcccccccHHHHHhCCCCCEEEEEeccCCCCCHH-HHHHHHhhCCCcEEEEcCCcCCCcccccHHHHHHHHHh--hC
Confidence 1 1111224567789999999999999999998 79999999999999999999999999999999999998 64
|
| >4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A | Back alignment and structure |
|---|
Probab=99.85 E-value=2e-20 Score=166.93 Aligned_cols=206 Identities=14% Similarity=0.146 Sum_probs=128.3
Q ss_pred Cccccc---cCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccccc
Q 013862 2 YGACIF---QLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLL 78 (435)
Q Consensus 2 yG~s~~---p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~ 78 (435)
+|.|.. +....++++++++|+.+++++++. ++++|+||||||.+|+.+|.++|++|+++|++++.........
T Consensus 57 ~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 132 (269)
T 4dnp_A 57 AGSVNPDFFDFRRYTTLDPYVDDLLHILDALGI----DCCAYVGHSVSAMIGILASIRRPELFSKLILIGASPRFLNDED 132 (269)
T ss_dssp STTSCGGGCCTTTCSSSHHHHHHHHHHHHHTTC----CSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCCBCBTT
T ss_pred CCCCCCCCCCccccCcHHHHHHHHHHHHHhcCC----CeEEEEccCHHHHHHHHHHHhCcHhhceeEEeCCCCCCCChHH
Confidence 566644 234456999999999999999977 5899999999999999999999999999999998754332211
Q ss_pred ccccccccccccchhHHHHHHHHHhhcCChhHHHHH--hhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHH
Q 013862 79 QTIMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMD--SIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKL 156 (435)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (435)
.. ...... ................... ..............+...... ..........
T Consensus 133 ~~------~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~ 192 (269)
T 4dnp_A 133 YH------GGFEQG---EIEKVFSAMEANYEAWVNGFAPLAVGADVPAAVREFSRTLFN-----------MRPDITLFVS 192 (269)
T ss_dssp BC------CSBCHH---HHHHHHHHHHHCHHHHHHHHHHHHHCSSCHHHHHHHHHHHHH-----------SCHHHHHHHH
T ss_pred hc------cccchH---HHHHHHHhccccHHHHHHHhhhhhccCCChhHHHHHHHHHHc-----------cCcchhhhHh
Confidence 10 001100 1111111100000000000 000000011111111111110 0111111111
Q ss_pred hhhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCC-ceEEEeCCCCccccccCchhHHHHHhhccccc
Q 013862 157 ELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPN-CQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYR 235 (435)
Q Consensus 157 ~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~ 235 (435)
..+ ...+....+.++++|+++++|++|.+++.+ ..+.+.+.+++ +++++++++||+++.|+|+++++.|.+ |++
T Consensus 193 ~~~--~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~--fl~ 267 (269)
T 4dnp_A 193 RTV--FNSDMRGVLGLVKVPCHIFQTARDHSVPAS-VATYLKNHLGGKNTVHWLNIEGHLPHLSAPTLLAQELRR--ALS 267 (269)
T ss_dssp HHH--HTCCCGGGGGGCCSCEEEEEEESBTTBCHH-HHHHHHHHSSSCEEEEEEEEESSCHHHHCHHHHHHHHHH--HHC
T ss_pred hhh--cchhhHhhhccccCCEEEEecCCCcccCHH-HHHHHHHhCCCCceEEEeCCCCCCccccCHHHHHHHHHH--HHh
Confidence 111 111234567789999999999999999998 79999999998 799999999999999999999999999 876
Q ss_pred c
Q 013862 236 R 236 (435)
Q Consensus 236 ~ 236 (435)
+
T Consensus 268 ~ 268 (269)
T 4dnp_A 268 H 268 (269)
T ss_dssp -
T ss_pred h
Confidence 4
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.85 E-value=7.5e-21 Score=170.67 Aligned_cols=208 Identities=12% Similarity=0.022 Sum_probs=122.3
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhC-CCceeEEEEecCCcccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARN-PDMDLVLILANPATSFRKSLLQT 80 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~-p~~v~~lVli~~~~~~~~~~~~~ 80 (435)
+|.|..+ ...++++++++|+.+++++++. ++++|+||||||.+|+.+++++ |++|+++|++++...........
T Consensus 57 ~G~S~~~-~~~~~~~~~~~dl~~~l~~l~~----~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~ 131 (273)
T 1a8s_A 57 HGRSSQP-WSGNDMDTYADDLAQLIEHLDL----RDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEAN 131 (273)
T ss_dssp STTSCCC-SSCCSHHHHHHHHHHHHHHTTC----CSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSC
T ss_pred CCCCCCC-CCCCCHHHHHHHHHHHHHHhCC----CCeEEEEeChHHHHHHHHHHhcCchheeEEEEEcccCcccccCccc
Confidence 5777644 3468999999999999999987 5899999999999999988876 99999999999764321110000
Q ss_pred ccccccccccchhHHHHHHHHHhhcCChhHHHHH-h-hh----hccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhh
Q 013862 81 IMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMD-S-IV----KGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLW 154 (435)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (435)
...........+................. . .. .....+........... . .. ...
T Consensus 132 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~--~~---~~~ 192 (273)
T 1a8s_A 132 -----PGGLPMEVFDGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGM---------A--AG---HKN 192 (273)
T ss_dssp -----TTSBCHHHHHHHHHHHHHHHHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHH---------H--SC---HHH
T ss_pred -----cccCcHHHHHHHHHHhHhhHHHHHHHhhcccccCcCCcccccCHHHHHHHHHhcc---------c--cc---hhH
Confidence 00000000000000000000000000000 0 00 00000111111100000 0 00 000
Q ss_pred HHhhhhhh-hhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhccc
Q 013862 155 KLELLKSA-SAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGY 233 (435)
Q Consensus 155 ~~~~~~~~-~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~F 233 (435)
....+... ..+..+.+.++++|+|+++|++|.++|.+...+.+.+..+++++++++++||+++.|+|+++++.|.+ |
T Consensus 193 ~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~--f 270 (273)
T 1a8s_A 193 AYDCIKAFSETDFTEDLKKIDVPTLVVHGDADQVVPIEASGIASAALVKGSTLKIYSGAPHGLTDTHKDQLNADLLA--F 270 (273)
T ss_dssp HHHHHHHHHHCCCHHHHHTCCSCEEEEEETTCSSSCSTTTHHHHHHHSTTCEEEEETTCCSCHHHHTHHHHHHHHHH--H
T ss_pred HHHHHHHHhccChhhhhhcCCCCEEEEECCCCccCChHHHHHHHHHhCCCcEEEEeCCCCCcchhhCHHHHHHHHHH--H
Confidence 00011000 11223567789999999999999999987335667788899999999999999999999999999999 7
Q ss_pred cc
Q 013862 234 YR 235 (435)
Q Consensus 234 l~ 235 (435)
+.
T Consensus 271 l~ 272 (273)
T 1a8s_A 271 IK 272 (273)
T ss_dssp HH
T ss_pred Hh
Confidence 74
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 | Back alignment and structure |
|---|
Probab=99.85 E-value=8.1e-21 Score=169.05 Aligned_cols=201 Identities=15% Similarity=0.125 Sum_probs=118.7
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
||.|..+ ..++++++++++.+.++ ++++|+||||||.+|+.+|.++|++|+++|++++.+.......
T Consensus 50 ~G~S~~~--~~~~~~~~~~~l~~~l~--------~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~--- 116 (258)
T 1m33_A 50 FGRSRGF--GALSLADMAEAVLQQAP--------DKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDE--- 116 (258)
T ss_dssp STTCCSC--CCCCHHHHHHHHHTTSC--------SSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTT---
T ss_pred CCCCCCC--CCcCHHHHHHHHHHHhC--------CCeEEEEECHHHHHHHHHHHHhhHhhceEEEECCCCCcccccc---
Confidence 5777655 56899998887654432 4899999999999999999999999999999997643221110
Q ss_pred cccccccccchh-HHHHHHHHHhhcCChhHHHHHhhh----hccchhHHHHHhHHhHHhhhcchhHHhccCC-chhhhhH
Q 013862 82 MPIPAELMSGQM-TLTLSYLLSLLTGDPLKMAMDSIV----KGLFLQSTIQERSQDFVAMSSYLPVLANILP-KETLLWK 155 (435)
Q Consensus 82 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 155 (435)
+....... ......+... .......... .................. .... .......
T Consensus 117 ----~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~ 179 (258)
T 1m33_A 117 ----WPGIKPDVLAGFQQQLSDD----QQRTVERFLALQTMGTETARQDARALKKTVLA---------LPMPEVDVLNGG 179 (258)
T ss_dssp ----BCSBCHHHHHHHHHHHHHH----HHHHHHHHHHTTSTTSTTHHHHHHHHHHHHHT---------SCCCCHHHHHHH
T ss_pred ----ccCCCHHHHHHHHHHHhcc----HHHHHHHHHHHHhcCCccchhhHHHHHHHHHh---------ccCCcHHHHHHH
Confidence 00011000 0000000000 0000000000 000000000000000000 0000 0111111
Q ss_pred HhhhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhccccc
Q 013862 156 LELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYR 235 (435)
Q Consensus 156 ~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~ 235 (435)
...+. ..+..+.+.++++|+++|+|++|.+++.. ..+.+.+.++++++++++++||++++|+|+++++.|.+ |+.
T Consensus 180 ~~~~~--~~~~~~~l~~i~~P~l~i~G~~D~~~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~--fl~ 254 (258)
T 1m33_A 180 LEILK--TVDLRQPLQNVSMPFLRLYGYLDGLVPRK-VVPMLDKLWPHSESYIFAKAAHAPFISHPAEFCHLLVA--LKQ 254 (258)
T ss_dssp HHHHH--HCCCTTGGGGCCSCEEEEEETTCSSSCGG-GCC-CTTTCTTCEEEEETTCCSCHHHHSHHHHHHHHHH--HHT
T ss_pred HHHHH--hCCHHHHHhhCCCCEEEEeecCCCCCCHH-HHHHHHHhCccceEEEeCCCCCCccccCHHHHHHHHHH--HHH
Confidence 11111 11224567889999999999999999988 68888888999999999999999999999999999999 886
Q ss_pred cc
Q 013862 236 RG 237 (435)
Q Consensus 236 ~~ 237 (435)
+.
T Consensus 255 ~~ 256 (258)
T 1m33_A 255 RV 256 (258)
T ss_dssp TS
T ss_pred hc
Confidence 43
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=5.8e-20 Score=167.23 Aligned_cols=212 Identities=15% Similarity=0.096 Sum_probs=124.2
Q ss_pred Cccccc--cCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCc-ccccccc
Q 013862 2 YGACIF--QLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPAT-SFRKSLL 78 (435)
Q Consensus 2 yG~s~~--p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~-~~~~~~~ 78 (435)
+|.|.. +....|+++++++|+.+++++++. ++++|+||||||.+|+.+|.++|++|+++|++++.. .......
T Consensus 62 ~G~S~~~~~~~~~~~~~~~a~dl~~~l~~l~~----~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 137 (298)
T 1q0r_A 62 TGRSTTRDFAAHPYGFGELAADAVAVLDGWGV----DRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDAN 137 (298)
T ss_dssp STTSCCCCTTTSCCCHHHHHHHHHHHHHHTTC----SSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHH
T ss_pred CCCCCCCCCCcCCcCHHHHHHHHHHHHHHhCC----CceEEEEeCcHHHHHHHHHHhCchhhheeEEecccCCCcccccc
Confidence 577765 334569999999999999999987 589999999999999999999999999999999875 2100000
Q ss_pred ----ccccccccccccchhHHHHHHHHHhhc--CChhHHHHH------hh-hhcc-chhHHHHHhHHhHHhhhcchhHHh
Q 013862 79 ----QTIMPIPAELMSGQMTLTLSYLLSLLT--GDPLKMAMD------SI-VKGL-FLQSTIQERSQDFVAMSSYLPVLA 144 (435)
Q Consensus 79 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~------~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 144 (435)
...... ..............+..... ......... .. .... ...+...........
T Consensus 138 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 207 (298)
T 1q0r_A 138 IERVMRGEPT-LDGLPGPQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAID--------- 207 (298)
T ss_dssp HHHHHHTCCC-SSCSCCCCHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHH---------
T ss_pred hhhhhhhhhh-hcccccccHHHHHHHhccCcccccHHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHHhh---------
Confidence 000000 00000000011111111000 000000000 00 0000 011111111111000
Q ss_pred ccCCchhh-hhHHhhhhhhhhhhhhh-cccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCch
Q 013862 145 NILPKETL-LWKLELLKSASAYANAR-LDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGV 222 (435)
Q Consensus 145 ~~~~~~~~-~~~~~~~~~~~~~~~~~-l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe 222 (435)
........ ....... ...+.... +.++++|+|+|+|++|.++|++ ..+.+.+.+|++++++++++|| |.|+
T Consensus 208 ~~~~~~~~~~~~~~~~--~~~~~~~~~l~~i~~P~Lvi~G~~D~~~~~~-~~~~~~~~~p~~~~~~i~~~gH----e~p~ 280 (298)
T 1q0r_A 208 HAGGVLAEPYAHYSLT--LPPPSRAAELREVTVPTLVIQAEHDPIAPAP-HGKHLAGLIPTARLAEIPGMGH----ALPS 280 (298)
T ss_dssp HTTTCCSCCCGGGGCC--CCCGGGGGGGGGCCSCEEEEEETTCSSSCTT-HHHHHHHTSTTEEEEEETTCCS----SCCG
T ss_pred ccCCccchhhhhhhhh--cCcccccccccccCCCEEEEEeCCCccCCHH-HHHHHHHhCCCCEEEEcCCCCC----CCcH
Confidence 00000000 0000000 01122345 8889999999999999999998 7899999999999999999999 8899
Q ss_pred hHHHHHhhcccccc
Q 013862 223 DLVTTIKGAGYYRR 236 (435)
Q Consensus 223 ~~~~~I~~~~Fl~~ 236 (435)
++++.|.+ |+.+
T Consensus 281 ~~~~~i~~--fl~~ 292 (298)
T 1q0r_A 281 SVHGPLAE--VILA 292 (298)
T ss_dssp GGHHHHHH--HHHH
T ss_pred HHHHHHHH--HHHH
Confidence 99999999 8754
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=9.3e-21 Score=170.21 Aligned_cols=211 Identities=12% Similarity=0.092 Sum_probs=120.9
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
+|.|..++...++++++++|+.+++++++. .++++||||||||.+++.+|.++|++|+++|++++.........
T Consensus 42 ~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~---~~~~~lvGhSmGG~va~~~a~~~P~~v~~lvl~~~~~~~~~~~~--- 115 (273)
T 1xkl_A 42 SGTDLRKIEELRTLYDYTLPLMELMESLSA---DEKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNS--- 115 (273)
T ss_dssp STTCCCCGGGCCSHHHHHHHHHHHHHTSCS---SSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCT---
T ss_pred CCCCccCcccccCHHHHHHHHHHHHHHhcc---CCCEEEEecCHHHHHHHHHHHhChHhheEEEEEeccCCCCCCcH---
Confidence 577765555568999999999999999862 15899999999999999999999999999999997532111000
Q ss_pred cccccccccchhHHHHHHHHHhhcC-ChhHHHHHhh-------hhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhh
Q 013862 82 MPIPAELMSGQMTLTLSYLLSLLTG-DPLKMAMDSI-------VKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLL 153 (435)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (435)
.. ....+...... .......... ................... .................
T Consensus 116 ---------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 182 (273)
T 1xkl_A 116 ---------SF---VLEQYNERTPAENWLDTQFLPYGSPEEPLTSMFFGPKFLAHKLYQLCS-PEDLALASSLVRPSSLF 182 (273)
T ss_dssp ---------TH---HHHHHHHTSCTTTTTTCEEEECSCTTSCCEEEECCHHHHHHHTSTTSC-HHHHHHHHHHCCCBCCC
T ss_pred ---------HH---HHHHhhccCChhhHHHHHHhhccCCCCCccccccCHHHHHHHhhccCC-HHHHHHHHHhcCCCchh
Confidence 00 00000000000 0000000000 0000000000000000000 00000000000000000
Q ss_pred hHHhhhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhccc
Q 013862 154 WKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGY 233 (435)
Q Consensus 154 ~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~F 233 (435)
... +.... .. ......++|+++|+|++|.++|+. ..+.+.+.+|+++++++++|||++++|+|++|++.|.+ |
T Consensus 183 -~~~-~~~~~-~~-~~~~~~~~P~l~i~G~~D~~~p~~-~~~~~~~~~p~~~~~~i~~aGH~~~~e~P~~~~~~i~~--f 255 (273)
T 1xkl_A 183 -MED-LSKAK-YF-TDERFGSVKRVYIVCTEDKGIPEE-FQRWQIDNIGVTEAIEIKGADHMAMLCEPQKLCASLLE--I 255 (273)
T ss_dssp -HHH-HHHCC-CC-CTTTGGGSCEEEEEETTCTTTTHH-HHHHHHHHHCCSEEEEETTCCSCHHHHSHHHHHHHHHH--H
T ss_pred -hhh-hhccc-cc-chhhhCCCCeEEEEeCCccCCCHH-HHHHHHHhCCCCeEEEeCCCCCCchhcCHHHHHHHHHH--H
Confidence 000 00000 00 001124789999999999999998 78899999999999999999999999999999999999 8
Q ss_pred ccccc
Q 013862 234 YRRGR 238 (435)
Q Consensus 234 l~~~~ 238 (435)
+++..
T Consensus 256 l~~~~ 260 (273)
T 1xkl_A 256 AHKYN 260 (273)
T ss_dssp HHHCC
T ss_pred HHHhc
Confidence 86543
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} | Back alignment and structure |
|---|
Probab=99.84 E-value=3.9e-21 Score=175.16 Aligned_cols=218 Identities=17% Similarity=0.143 Sum_probs=130.9
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
+|.|..+. ..++++++++|+.+++++++. ++++|+||||||.+|+.+|.++|++|+++|++++.........
T Consensus 67 ~G~S~~~~-~~~~~~~~~~~~~~~~~~~~~----~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~--- 138 (309)
T 3u1t_A 67 MGDSAKPD-IEYRLQDHVAYMDGFIDALGL----DDMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVPPALPMP--- 138 (309)
T ss_dssp STTSCCCS-SCCCHHHHHHHHHHHHHHHTC----CSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEESCTTTCSBS---
T ss_pred CCCCCCCC-cccCHHHHHHHHHHHHHHcCC----CceEEEEeCcHHHHHHHHHHhChHhheEEEEeccCCCCccccc---
Confidence 57776544 479999999999999999977 5899999999999999999999999999999998754321100
Q ss_pred cccccccccchhHHHHHHHHHhhcCChhHHH---------HHhh----hhccchhHHHHHhHHhHHhhhcc--hhHHhcc
Q 013862 82 MPIPAELMSGQMTLTLSYLLSLLTGDPLKMA---------MDSI----VKGLFLQSTIQERSQDFVAMSSY--LPVLANI 146 (435)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~----~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 146 (435)
. ...... ................. .... .......+....+.......... .......
T Consensus 139 --~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (309)
T 3u1t_A 139 --S-YEAMGP----QLGPLFRDLRTADVGEKMVLDGNFFVETILPEMGVVRSLSEAEMAAYRAPFPTRQSRLPTLQWPRE 211 (309)
T ss_dssp --C-SGGGHH----HHHHHHHHHTSTTHHHHHHTTTCHHHHTHHHHTSCSSCCCHHHHHHHHTTCCSTGGGHHHHHHHHH
T ss_pred --c-ccccch----hhhHHHHHHhccchhhhhccccceehhhhcccccccccCCHHHHHHHHHhcCCccccchHHHHHHH
Confidence 0 011111 11111111111100000 0000 00000111111110000000000 0000000
Q ss_pred CCchhhhhHHhhhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHH
Q 013862 147 LPKETLLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVT 226 (435)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~ 226 (435)
....... .............+.++++|+|+|+|++|.+++.+ ..+.+.+.+++.++++++++||+++.|+|+++++
T Consensus 212 ~~~~~~~---~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~ 287 (309)
T 3u1t_A 212 VPIGGEP---AFAEAEVLKNGEWLMASPIPKLLFHAEPGALAPKP-VVDYLSENVPNLEVRFVGAGTHFLQEDHPHLIGQ 287 (309)
T ss_dssp SCBTTBS---HHHHHHHHHHHHHHHHCCSCEEEEEEEECSSSCHH-HHHHHHHHSTTEEEEEEEEESSCHHHHCHHHHHH
T ss_pred hcccccc---chhhhhhhhhhhhcccCCCCEEEEecCCCCCCCHH-HHHHHHhhCCCCEEEEecCCcccchhhCHHHHHH
Confidence 0000000 00111111234567789999999999999999998 7889999999999999999999999999999999
Q ss_pred HHhhcccccccccc
Q 013862 227 TIKGAGYYRRGRIV 240 (435)
Q Consensus 227 ~I~~~~Fl~~~~~~ 240 (435)
.|.+ |+++....
T Consensus 288 ~i~~--fl~~~~~~ 299 (309)
T 3u1t_A 288 GIAD--WLRRNKPH 299 (309)
T ss_dssp HHHH--HHHHHCCC
T ss_pred HHHH--HHHhcchh
Confidence 9999 88766543
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.84 E-value=3.9e-21 Score=177.68 Aligned_cols=204 Identities=15% Similarity=0.147 Sum_probs=128.9
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
+|.|..++...++++++++|+.+++++++. ++++|+||||||.+|+.+|.++|++|+++|++++............
T Consensus 116 ~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~----~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 191 (330)
T 3p2m_A 116 HGHSAWREDGNYSPQLNSETLAPVLRELAP----GAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRHAELT 191 (330)
T ss_dssp STTSCCCSSCBCCHHHHHHHHHHHHHHSST----TCCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCHHHHHHHHHHT
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHhCC----CCcEEEEECHhHHHHHHHHHhChhhcceEEEEcCCCccchhhhhhh
Confidence 678877777889999999999999999987 5899999999999999999999999999999998753221110000
Q ss_pred ccc-cc-c-----cccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhh
Q 013862 82 MPI-PA-E-----LMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLW 154 (435)
Q Consensus 82 ~~~-~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (435)
... .. . ................. ................. ......+.+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~-----------~~~~~~~~~ 247 (330)
T 3p2m_A 192 AEQRGTVALMHGEREFPSFQAMLDLTIAAA-------------PHRDVKSLRRGVFHNSR-----------RLDNGNWVW 247 (330)
T ss_dssp CC-----------CCBSCHHHHHHHHHHHC-------------TTSCHHHHHHHHHTTEE-----------ECSSSCEEE
T ss_pred hhhhhhhhhhcCCccccCHHHHHHHHHhcC-------------CCCCHHHHHHHHHhccc-----------ccCCCceEE
Confidence 000 00 0 00000000000000000 00000000000000000 000000000
Q ss_pred HHhhhhh--hhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCce-EEEeCCCCccccccCchhHHHHHhhc
Q 013862 155 KLELLKS--ASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQ-TRRFGGGGHFLFLEDGVDLVTTIKGA 231 (435)
Q Consensus 155 ~~~~~~~--~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~-~~~i~~~gH~~~~e~pe~~~~~I~~~ 231 (435)
....+.. ......+.+.++++|+|+|+|++|.+++.+ ..+.+.+.+++++ +++++++||+++.|+|+++++.|.+
T Consensus 248 ~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~-~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~- 325 (330)
T 3p2m_A 248 RYDAIRTFGDFAGLWDDVDALSAPITLVRGGSSGFVTDQ-DTAELHRRATHFRGVHIVEKSGHSVQSDQPRALIEIVRG- 325 (330)
T ss_dssp SSCCCSBCCCHHHHHHHHHHCCSCEEEEEETTCCSSCHH-HHHHHHHHCSSEEEEEEETTCCSCHHHHCHHHHHHHHHH-
T ss_pred eechhhCccccHHHHHHHhhCCCCEEEEEeCCCCCCCHH-HHHHHHHhCCCCeeEEEeCCCCCCcchhCHHHHHHHHHH-
Confidence 0000000 001123467789999999999999999998 7999999999999 9999999999999999999999999
Q ss_pred ccccc
Q 013862 232 GYYRR 236 (435)
Q Consensus 232 ~Fl~~ 236 (435)
|+++
T Consensus 326 -fl~~ 329 (330)
T 3p2m_A 326 -VLDT 329 (330)
T ss_dssp -HTTC
T ss_pred -HHhc
Confidence 8864
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A | Back alignment and structure |
|---|
Probab=99.84 E-value=3.8e-20 Score=167.63 Aligned_cols=204 Identities=17% Similarity=0.178 Sum_probs=126.7
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
+|.|. ....++++++++|+.+++++++. ++++|+||||||.+|+.+|.++|++|+++|++++.........
T Consensus 82 ~G~s~--~~~~~~~~~~~~~~~~~l~~l~~----~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~--- 152 (293)
T 3hss_A 82 IGATE--NAEGFTTQTMVADTAALIETLDI----APARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRLDRARQ--- 152 (293)
T ss_dssp SGGGT--TCCSCCHHHHHHHHHHHHHHHTC----CSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHH---
T ss_pred CCCCC--CcccCCHHHHHHHHHHHHHhcCC----CcEEEEeeCccHHHHHHHHHHChHHHHhhheecccccCChhhh---
Confidence 45554 33468999999999999999977 5899999999999999999999999999999998854321110
Q ss_pred cccccccccchhHHHHHHHHHhhcCChhH-HHHHhhhhcc-----chhHHHHHhHHhHHhhhcchhHHhccCCchhhhhH
Q 013862 82 MPIPAELMSGQMTLTLSYLLSLLTGDPLK-MAMDSIVKGL-----FLQSTIQERSQDFVAMSSYLPVLANILPKETLLWK 155 (435)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (435)
................... .......... ............... ............
T Consensus 153 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~ 214 (293)
T 3hss_A 153 ----------FFNKAEAELYDSGVQLPPTYDARARLLENFSRKTLNDDVAVGDWIAMFSM--------WPIKSTPGLRCQ 214 (293)
T ss_dssp ----------HHHHHHHHHHHHTCCCCHHHHHHHHHHHHSCHHHHTCHHHHHHHHHHHHH--------SCCCCCHHHHHH
T ss_pred ----------HHHHHHHHHHhhcccchhhHHHHHHHhhhcccccccccccHHHHHHHHhh--------ccccccHHHHhH
Confidence 0000001111100000000 0000000000 000000000000000 000001111111
Q ss_pred HhhhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhccccc
Q 013862 156 LELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYR 235 (435)
Q Consensus 156 ~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~ 235 (435)
... .........+.++++|+|+++|++|.+++++ ..+.+.+.++++++++++++||+++.|+|+++++.|.+ |++
T Consensus 215 ~~~--~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~--fl~ 289 (293)
T 3hss_A 215 LDC--APQTNRLPAYRNIAAPVLVIGFADDVVTPPY-LGREVADALPNGRYLQIPDAGHLGFFERPEAVNTAMLK--FFA 289 (293)
T ss_dssp HTS--SCSSCCHHHHTTCCSCEEEEEETTCSSSCHH-HHHHHHHHSTTEEEEEETTCCTTHHHHSHHHHHHHHHH--HHH
T ss_pred hhh--ccccchHHHHhhCCCCEEEEEeCCCCCCCHH-HHHHHHHHCCCceEEEeCCCcchHhhhCHHHHHHHHHH--HHH
Confidence 100 0111223567789999999999999999998 79999999999999999999999999999999999999 886
Q ss_pred cc
Q 013862 236 RG 237 (435)
Q Consensus 236 ~~ 237 (435)
+.
T Consensus 290 ~~ 291 (293)
T 3hss_A 290 SV 291 (293)
T ss_dssp TC
T ss_pred hc
Confidence 53
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A | Back alignment and structure |
|---|
Probab=99.84 E-value=4.1e-20 Score=167.64 Aligned_cols=217 Identities=14% Similarity=0.084 Sum_probs=124.8
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHh-hhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSE-NCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQT 80 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l-~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~ 80 (435)
+|.|..+....++++++++|+.++++++ +. ++++|+||||||.+|+.+|.++|++|+++|++++......... .
T Consensus 66 ~G~S~~~~~~~~~~~~~~~dl~~~~~~l~~~----~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~-~ 140 (293)
T 1mtz_A 66 CGRSEEPDQSKFTIDYGVEEAEALRSKLFGN----EKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVK-E 140 (293)
T ss_dssp STTSCCCCGGGCSHHHHHHHHHHHHHHHHTT----CCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHHH-H
T ss_pred CccCCCCCCCcccHHHHHHHHHHHHHHhcCC----CcEEEEEecHHHHHHHHHHHhCchhhheEEecCCccChHHHHH-H
Confidence 5777665534589999999999999999 87 4899999999999999999999999999999998754211000 0
Q ss_pred ccccccccccchhHHHHHHHHHhh-cCChhHH-HHH-hhhh-----ccchhHHHHHhHHhHHhhhcchhHHhccCCchhh
Q 013862 81 IMPIPAELMSGQMTLTLSYLLSLL-TGDPLKM-AMD-SIVK-----GLFLQSTIQERSQDFVAMSSYLPVLANILPKETL 152 (435)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~-~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (435)
.... ...+.......+....... ....... ... .... ...+... .......... ...... .....+
T Consensus 141 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~---~~~~~~ 214 (293)
T 1mtz_A 141 MNRL-IDELPAKYRDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEV-LKSLEYAERR-NVYRIM---NGPNEF 214 (293)
T ss_dssp HHHH-HHTSCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTSCSSCCCHHH-HHHHHHHHHS-SHHHHH---TCSBTT
T ss_pred HHHH-HHhcCHHHHHHHHHhhccCCcChHHHHHHHHHHHHhhcccccCchHHH-HHhHhhhccc-hhhhhc---cCccee
Confidence 0000 0001110000010000000 0000000 000 0000 0000000 0000000000 000000 000000
Q ss_pred hhHHhhhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhcc
Q 013862 153 LWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAG 232 (435)
Q Consensus 153 ~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~ 232 (435)
.....+ ...+..+.+.++++|+|+|+|++| .+++. ..+.+.+.+|++++++++++||+++.|+|+++++.|.+
T Consensus 215 -~~~~~~--~~~~~~~~l~~i~~P~lii~G~~D-~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~-- 287 (293)
T 1mtz_A 215 -TITGTI--KDWDITDKISAIKIPTLITVGEYD-EVTPN-VARVIHEKIAGSELHVFRDCSHLTMWEDREGYNKLLSD-- 287 (293)
T ss_dssp -BCCSTT--TTCBCTTTGGGCCSCEEEEEETTC-SSCHH-HHHHHHHHSTTCEEEEETTCCSCHHHHSHHHHHHHHHH--
T ss_pred -cccccc--cCCChhhhhccCCCCEEEEeeCCC-CCCHH-HHHHHHHhCCCceEEEeCCCCCCccccCHHHHHHHHHH--
Confidence 000000 011123567889999999999999 56767 68999999999999999999999999999999999999
Q ss_pred cccc
Q 013862 233 YYRR 236 (435)
Q Consensus 233 Fl~~ 236 (435)
|+.+
T Consensus 288 fl~~ 291 (293)
T 1mtz_A 288 FILK 291 (293)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 8753
|
| >3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.84 E-value=2.9e-20 Score=165.04 Aligned_cols=208 Identities=14% Similarity=0.083 Sum_probs=123.7
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
+|.|..++...++++++++|+.+++++++. +++++|+||||||.+++.+|.++|++|+++|++++...........
T Consensus 42 ~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~---~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~- 117 (258)
T 3dqz_A 42 SGIDPRPIQAVETVDEYSKPLIETLKSLPE---NEEVILVGFSFGGINIALAADIFPAKIKVLVFLNAFLPDTTHVPSH- 117 (258)
T ss_dssp STTCSSCGGGCCSHHHHHHHHHHHHHTSCT---TCCEEEEEETTHHHHHHHHHTTCGGGEEEEEEESCCCCCSSSCTTH-
T ss_pred CcCCCCCCCccccHHHhHHHHHHHHHHhcc---cCceEEEEeChhHHHHHHHHHhChHhhcEEEEecCCCCCCCCcchH-
Confidence 577777666679999999999999999966 2589999999999999999999999999999999865322211100
Q ss_pred cccccccccchhHHHHHHHHH---hhcCChhHH--HHH-hhhhccchhHHHHHhHHhHHhhhcchhHHhccCCc-hhhhh
Q 013862 82 MPIPAELMSGQMTLTLSYLLS---LLTGDPLKM--AMD-SIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPK-ETLLW 154 (435)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 154 (435)
....... ......... ... ...................... ............ ..+..
T Consensus 118 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 182 (258)
T 3dqz_A 118 --------------VLDKYMEMPGGLGDCEFSSHETRNGTMSLLKMGPKFMKARLYQNCPI-EDYELAKMLHRQGSFFTE 182 (258)
T ss_dssp --------------HHHHHHTSTTCCTTCEEEEEEETTEEEEEEECCHHHHHHHTSTTSCH-HHHHHHHHHCCCEECCHH
T ss_pred --------------HHHHhcccchhhhhcccchhhhhccChhhhhhhHHHHHHHhhccCCH-HHHHHHHHhccCCchhhh
Confidence 0000000 000000000 000 0000000000000000000000 000000000000 00000
Q ss_pred HHhhhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhcccc
Q 013862 155 KLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYY 234 (435)
Q Consensus 155 ~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl 234 (435)
. +.. ..........++|+++|+|++|.++|++ ..+.+.+.++++++++++++||++++|+|+++++.|.+ |+
T Consensus 183 ~---~~~--~~~~~~~~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~--fl 254 (258)
T 3dqz_A 183 D---LSK--KEKFSEEGYGSVQRVYVMSSEDKAIPCD-FIRWMIDNFNVSKVYEIDGGDHMVMLSKPQKLFDSLSA--IA 254 (258)
T ss_dssp H---HHT--SCCCCTTTGGGSCEEEEEETTCSSSCHH-HHHHHHHHSCCSCEEEETTCCSCHHHHSHHHHHHHHHH--HH
T ss_pred h---hhc--cccccccccccCCEEEEECCCCeeeCHH-HHHHHHHhCCcccEEEcCCCCCchhhcChHHHHHHHHH--HH
Confidence 0 000 0001122234799999999999999998 79999999999999999999999999999999999999 77
Q ss_pred cc
Q 013862 235 RR 236 (435)
Q Consensus 235 ~~ 236 (435)
++
T Consensus 255 ~~ 256 (258)
T 3dqz_A 255 TD 256 (258)
T ss_dssp HH
T ss_pred HH
Confidence 53
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.6e-20 Score=167.76 Aligned_cols=200 Identities=16% Similarity=0.084 Sum_probs=126.2
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHH-hhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRS-ENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQT 80 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~-l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~ 80 (435)
+|.|..+.. ++++++++|+.+++++ ++. ++++|+||||||.+|+.+|.++|++|+++|+++|...........
T Consensus 60 ~G~s~~~~~--~~~~~~~~~~~~~l~~~~~~----~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 133 (272)
T 3fsg_A 60 MGNSDPISP--STSDNVLETLIEAIEEIIGA----RRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLT 133 (272)
T ss_dssp STTCCCCSS--CSHHHHHHHHHHHHHHHHTT----CCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECSSCCGGGCCC
T ss_pred CCCCCCCCC--CCHHHHHHHHHHHHHHHhCC----CcEEEEEeCchHHHHHHHHHhChHhhheeEEECcccccCcccccc
Confidence 566665554 8999999999999999 655 589999999999999999999999999999999886332221110
Q ss_pred cc-------ccccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhh-hcchhHHhccCCchhh
Q 013862 81 IM-------PIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAM-SSYLPVLANILPKETL 152 (435)
Q Consensus 81 ~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 152 (435)
.. .. ...+... ....+........ .................. ......+.....
T Consensus 134 ~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 195 (272)
T 3fsg_A 134 GKHINILEEDI-NPVENKE---YFADFLSMNVIIN----------NQAWHDYQNLIIPGLQKEDKTFIDQLQNNYS---- 195 (272)
T ss_dssp CCCCCEECSCC-CCCTTGG---GHHHHHHHCSEES----------HHHHHHHHHHTHHHHHHCCHHHHHHHTTSCS----
T ss_pred ccchhhhhhhh-hcccCHH---HHHHHHHHhccCC----------CchhHHHHHHhhhhhhhccHHHHHHHhhhcC----
Confidence 00 00 1111111 1111111100000 000000000000000000 000000000000
Q ss_pred hhHHhhhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhcc
Q 013862 153 LWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAG 232 (435)
Q Consensus 153 ~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~ 232 (435)
........+.++++|+|+++|++|.+++++ ..+.+.+.++++++++++++||+++.|+|+++++.|.+
T Consensus 196 ---------~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~-- 263 (272)
T 3fsg_A 196 ---------FTFEEKLKNINYQFPFKIMVGRNDQVVGYQ-EQLKLINHNENGEIVLLNRTGHNLMIDQREAVGFHFDL-- 263 (272)
T ss_dssp ---------CTTHHHHTTCCCSSCEEEEEETTCTTTCSH-HHHHHHTTCTTEEEEEESSCCSSHHHHTHHHHHHHHHH--
T ss_pred ---------CChhhhhhhccCCCCEEEEEeCCCCcCCHH-HHHHHHHhcCCCeEEEecCCCCCchhcCHHHHHHHHHH--
Confidence 011112345788999999999999999999 79999999999999999999999999999999999999
Q ss_pred ccccc
Q 013862 233 YYRRG 237 (435)
Q Consensus 233 Fl~~~ 237 (435)
|+++.
T Consensus 264 fl~~~ 268 (272)
T 3fsg_A 264 FLDEL 268 (272)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 88654
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=99.84 E-value=3.7e-20 Score=165.03 Aligned_cols=200 Identities=11% Similarity=0.005 Sum_probs=122.6
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhC-CCceeEEEEecCCcccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARN-PDMDLVLILANPATSFRKSLLQT 80 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~-p~~v~~lVli~~~~~~~~~~~~~ 80 (435)
||.|..+ ...++++++++|+.+++++++. ++++|+||||||.+|+.+|.++ |++|+++|++++.. ........
T Consensus 58 ~G~S~~~-~~~~~~~~~~~~~~~~l~~l~~----~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~-~~~~~~~~ 131 (264)
T 3ibt_A 58 HDAKQTD-SGDFDSQTLAQDLLAFIDAKGI----RDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLL-QPHPGFWQ 131 (264)
T ss_dssp CSTTCCC-CSCCCHHHHHHHHHHHHHHTTC----CSEEEEEETTHHHHHHHHHHHSCTTTSCEEEEESCCS-SCCHHHHH
T ss_pred CCCCCCC-ccccCHHHHHHHHHHHHHhcCC----CceEEEecchhHHHHHHHHHhhChhhhheEEEecCCC-CcChhhcc
Confidence 5777655 5678999999999999999987 4899999999999999999999 99999999999886 11111100
Q ss_pred ccccccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhh
Q 013862 81 IMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLK 160 (435)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (435)
.... ... ................. ................. .....+......+.
T Consensus 132 ~~~~-~~~-~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~ 186 (264)
T 3ibt_A 132 QLAE-GQH-PTEYVAGRQSFFDEWAE------------TTDNADVLNHLRNEMPW-----------FHGEMWQRACREIE 186 (264)
T ss_dssp HHHH-TTC-TTTHHHHHHHHHHHHHT------------TCCCHHHHHHHHHTGGG-----------SCHHHHHHHHHHHH
T ss_pred hhhc-ccC-hhhHHHHHHHHHHHhcc------------cCCcHHHHHHHHHhhhh-----------ccchhHHHHHHHhc
Confidence 0000 000 00011111111111100 00111111111111100 01111111111111
Q ss_pred hhhh---hhhhhcccccceEEEEeeC--CCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhccccc
Q 013862 161 SASA---YANARLDAVKAQTLILCSG--RDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYR 235 (435)
Q Consensus 161 ~~~~---~~~~~l~~i~~Pvlii~G~--~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~ 235 (435)
.... .....+.++++|+++++|. +|...+.. ..+.+.+..+++++++++++||+++.|+|+++++.|.+ |++
T Consensus 187 ~~~~~~~~~~~~l~~i~~P~lii~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~--fl~ 263 (264)
T 3ibt_A 187 ANYRTWGSPLDRMDSLPQKPEICHIYSQPLSQDYRQ-LQLEFAAGHSWFHPRHIPGRTHFPSLENPVAVAQAIRE--FLQ 263 (264)
T ss_dssp HHHHHHSSHHHHHHTCSSCCEEEEEECCSCCHHHHH-HHHHHHHHCTTEEEEECCCSSSCHHHHCHHHHHHHHHH--HTC
T ss_pred cchhhccchhhcccccCCCeEEEEecCCccchhhHH-HHHHHHHhCCCceEEEcCCCCCcchhhCHHHHHHHHHH--HHh
Confidence 1111 1236678899999999764 44433345 57888999999999999999999999999999999999 875
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.6e-20 Score=168.94 Aligned_cols=203 Identities=10% Similarity=0.032 Sum_probs=117.3
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhC-CCceeEEEEecCCcccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARN-PDMDLVLILANPATSFRKSLLQT 80 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~-p~~v~~lVli~~~~~~~~~~~~~ 80 (435)
||.|..+ ...|+++++++|+.++++++++ ++++|+||||||.+|+.+|.++ |++|+++|++++...........
T Consensus 64 hG~S~~~-~~~~~~~~~a~dl~~ll~~l~~----~~~~lvGhSmGG~va~~~A~~~~P~rv~~lvl~~~~~~~~~~~~~~ 138 (276)
T 2wj6_A 64 HGLSPSE-VPDFGYQEQVKDALEILDQLGV----ETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWLMWAPKPDFAK 138 (276)
T ss_dssp CSSSCCC-CCCCCHHHHHHHHHHHHHHHTC----CSEEEEEEGGGHHHHHHHHHHHHHHHSCCEEEESCCCSSCCHHHHH
T ss_pred CCCCCCC-CCCCCHHHHHHHHHHHHHHhCC----CceEEEEECHHHHHHHHHHHHhCHHhhceEEEecccccCCCchHHH
Confidence 6888765 3579999999999999999998 5899999999999999999999 99999999998753211000000
Q ss_pred ccccccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhh
Q 013862 81 IMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLK 160 (435)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (435)
.... ... ................ ................. ......+........
T Consensus 139 ~~~~-~~~-~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~ 193 (276)
T 2wj6_A 139 SLTL-LKD-PERWREGTHGLFDVWL------------DGHDEKRVRHHLLEEMA-----------DYGYDCWGRSGRVIE 193 (276)
T ss_dssp HHHH-HHC-TTTHHHHHHHHHHHHH------------TTBCCHHHHHHHHTTTT-----------TCCHHHHHHHHHHHH
T ss_pred Hhhh-ccC-cchHHHHHHHHHHHhh------------cccchHHHHHHHHHHhh-----------hcchhhhhhccchhH
Confidence 0000 000 0000000000000000 00000000000000000 000000000000000
Q ss_pred hh---hhhhhhhcccccceEEEEeeCCCCCCC-ChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhcccccc
Q 013862 161 SA---SAYANARLDAVKAQTLILCSGRDQLLP-SEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 161 ~~---~~~~~~~l~~i~~Pvlii~G~~D~~~~-~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~ 236 (435)
.. .....+.+..+++|+++++|..|...+ .....+.+.+.+|+++++++++|||++++|+|++|++.|.+ |+.+
T Consensus 194 ~~~~~~~~~~~~l~~i~~P~lv~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~i~~~gH~~~~e~P~~~~~~i~~--Fl~~ 271 (276)
T 2wj6_A 194 DAYGRNGSPMQMMANLTKTRPIRHIFSQPTEPEYEKINSDFAEQHPWFSYAKLGGPTHFPAIDVPDRAAVHIRE--FATA 271 (276)
T ss_dssp HHHHHHCCHHHHHHTCSSCCCEEEEECCSCSHHHHHHHHHHHHHCTTEEEEECCCSSSCHHHHSHHHHHHHHHH--HHHH
T ss_pred HHHhhccchhhHHhhcCCCceEEEEecCccchhHHHHHHHHHhhCCCeEEEEeCCCCCcccccCHHHHHHHHHH--HHhh
Confidence 00 001124567889999998874433222 11135678888999999999999999999999999999999 8864
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.5e-19 Score=165.04 Aligned_cols=209 Identities=15% Similarity=0.088 Sum_probs=128.7
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
+|.|..+....++++++++|+.+++++++. ++++|+||||||.+|+.+|.++|++|+++|++++............
T Consensus 84 ~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 159 (315)
T 4f0j_A 84 FCKSSKPAHYQYSFQQLAANTHALLERLGV----ARASVIGHSMGGMLATRYALLYPRQVERLVLVNPIGLEDWKALGVP 159 (315)
T ss_dssp STTSCCCSSCCCCHHHHHHHHHHHHHHTTC----SCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCSSCHHHHTCC
T ss_pred CCCCCCCCccccCHHHHHHHHHHHHHHhCC----CceEEEEecHHHHHHHHHHHhCcHhhheeEEecCcccCCcccccch
Confidence 577776666689999999999999999877 4899999999999999999999999999999998643221111000
Q ss_pred ccccccc----ccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHh
Q 013862 82 MPIPAEL----MSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLE 157 (435)
Q Consensus 82 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (435)
... ... .................. ...... .......... ............+...
T Consensus 160 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-~~~~~~~~~~-------~~~~~~~~~~~~~~~~ 219 (315)
T 4f0j_A 160 WRS-VDDWYRRDLQTSAEGIRQYQQATYY-----------AGEWRP-EFDRWVQMQA-------GMYRGKGRESVAWNSA 219 (315)
T ss_dssp CCC-HHHHHHHHTTCCHHHHHHHHHHHTS-----------TTCCCG-GGHHHHHHHH-------HHTTSTTHHHHHHHHH
T ss_pred hhh-hHHHHhhcccCChHHHHHHHHHHHh-----------ccccCC-chHHHHHHHH-------HHhhccCcchhhHHHH
Confidence 000 000 000000001110000000 000000 0000000000 0000001111111110
Q ss_pred hh--hhhhhhhhhhcccccceEEEEeeCCCCCCC----------------ChhHHHHHHhhCCCceEEEeCCCCcccccc
Q 013862 158 LL--KSASAYANARLDAVKAQTLILCSGRDQLLP----------------SEEEGDRLCRALPNCQTRRFGGGGHFLFLE 219 (435)
Q Consensus 158 ~~--~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~----------------~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e 219 (435)
.. ..........+.++++|+|+++|++|.++| .+ ..+.+.+..+++++++++++||+++.|
T Consensus 220 ~~~~~~~~~~~~~~l~~~~~P~lii~G~~D~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~ 298 (315)
T 4f0j_A 220 LTYDMIFTQPVVYELDRLQMPTLLLIGEKDNTAIGKDAAPAELKARLGNYAQ-LGKDAARRIPQATLVEFPDLGHTPQIQ 298 (315)
T ss_dssp HHHHHHHHCCCGGGGGGCCSCEEEEEETTCCCCTTGGGSCHHHHTTSCCHHH-HHHHHHHHSTTEEEEEETTCCSCHHHH
T ss_pred HhcCccccchhhhhcccCCCCeEEEEecCCCcCccccccccccccccccchh-hhhHHHhhcCCceEEEeCCCCcchhhh
Confidence 00 011112245678899999999999999998 55 678899999999999999999999999
Q ss_pred CchhHHHHHhhccccccc
Q 013862 220 DGVDLVTTIKGAGYYRRG 237 (435)
Q Consensus 220 ~pe~~~~~I~~~~Fl~~~ 237 (435)
+|+++++.|.+ |+++.
T Consensus 299 ~p~~~~~~i~~--fl~~~ 314 (315)
T 4f0j_A 299 APERFHQALLE--GLQTQ 314 (315)
T ss_dssp SHHHHHHHHHH--HHCC-
T ss_pred CHHHHHHHHHH--HhccC
Confidence 99999999999 88653
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.3e-20 Score=169.20 Aligned_cols=209 Identities=16% Similarity=0.156 Sum_probs=129.6
Q ss_pred CccccccCC---CCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccccc
Q 013862 2 YGACIFQLQ---IGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLL 78 (435)
Q Consensus 2 yG~s~~p~~---~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~ 78 (435)
+|.|..+.. ...+++++++|+.+++++++. ++++|+||||||.+|+.+|.++|++|+++|++++.........
T Consensus 65 ~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 140 (282)
T 3qvm_A 65 SGQSDLESFSTKRYSSLEGYAKDVEEILVALDL----VNVSIIGHSVSSIIAGIASTHVGDRISDITMICPSPCFMNFPP 140 (282)
T ss_dssp STTSCGGGCCTTGGGSHHHHHHHHHHHHHHTTC----CSEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBSBEETT
T ss_pred CCCCCCCCCCccccccHHHHHHHHHHHHHHcCC----CceEEEEecccHHHHHHHHHhCchhhheEEEecCcchhccCch
Confidence 566665542 334999999999999999977 5899999999999999999999999999999998864433211
Q ss_pred ccccccccccccchhHHHHHHHHHhhcCChhHH---HHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhH
Q 013862 79 QTIMPIPAELMSGQMTLTLSYLLSLLTGDPLKM---AMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWK 155 (435)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (435)
.. ....... ................ ........................ .........
T Consensus 141 ~~-----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~ 201 (282)
T 3qvm_A 141 DY-----VGGFERD---DLEELINLMDKNYIGWANYLAPLVMGASHSSELIGELSGSFCT-----------TDPIVAKTF 201 (282)
T ss_dssp TE-----ECSBCHH---HHHHHHHHHHHCHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHH-----------SCHHHHHHH
T ss_pred hh-----hchhccc---cHHHHHHHHhcchhhHHHHHHhhccCCccchhhHHHHHHHHhc-----------CCcHHHHHH
Confidence 00 1111110 1111111100000000 000000001111111111111110 000000000
Q ss_pred HhhhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhccccc
Q 013862 156 LELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYR 235 (435)
Q Consensus 156 ~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~ 235 (435)
.... ........+.++++|+++++|++|.+++.+ ..+.+.+.++++++++++++||+++.|+|+++++.|.+ |++
T Consensus 202 ~~~~--~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~--fl~ 276 (282)
T 3qvm_A 202 AKAT--FFSDYRSLLEDISTPALIFQSAKDSLASPE-VGQYMAENIPNSQLELIQAEGHCLHMTDAGLITPLLIH--FIQ 276 (282)
T ss_dssp HHHH--HSCBCGGGGGGCCSCEEEEEEEECTTCCHH-HHHHHHHHSSSEEEEEEEEESSCHHHHCHHHHHHHHHH--HHH
T ss_pred HHHH--hcccHHHHHhcCCCCeEEEEeCCCCcCCHH-HHHHHHHhCCCCcEEEecCCCCcccccCHHHHHHHHHH--HHH
Confidence 0000 111223567889999999999999999998 79999999999999999999999999999999999999 887
Q ss_pred ccc
Q 013862 236 RGR 238 (435)
Q Consensus 236 ~~~ 238 (435)
+..
T Consensus 277 ~~~ 279 (282)
T 3qvm_A 277 NNQ 279 (282)
T ss_dssp HC-
T ss_pred hcC
Confidence 543
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A | Back alignment and structure |
|---|
Probab=99.83 E-value=1.1e-20 Score=173.61 Aligned_cols=216 Identities=14% Similarity=0.078 Sum_probs=121.6
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
||.|..+....|+++++++|+.+++++++.. ++++|+||||||.+|+.+|.++|++|+++|++++....... ...
T Consensus 80 hG~S~~~~~~~~~~~~~a~dl~~ll~~l~~~---~~~~lvGhSmGg~ia~~~A~~~P~~v~~lvl~~~~~~~~~~-~~~- 154 (318)
T 2psd_A 80 MGKSGKSGNGSYRLLDHYKYLTAWFELLNLP---KKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDVIES-WDE- 154 (318)
T ss_dssp STTCCCCTTSCCSHHHHHHHHHHHHTTSCCC---SSEEEEEEEHHHHHHHHHHHHCTTSEEEEEEEEECCSCBSC-CTT-
T ss_pred CCCCCCCCCCccCHHHHHHHHHHHHHhcCCC---CCeEEEEEChhHHHHHHHHHhChHhhheEEEeccccCCccc-hhh-
Confidence 6888766555699999999999999999761 48999999999999999999999999999999864321100 000
Q ss_pred cccccccccchhHHHHHH--HHHhhcC-ChhHH-HHHhhhhccchhHHHHHhHHhHHhhhcchh---HHhccCCchh--h
Q 013862 82 MPIPAELMSGQMTLTLSY--LLSLLTG-DPLKM-AMDSIVKGLFLQSTIQERSQDFVAMSSYLP---VLANILPKET--L 152 (435)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~--~ 152 (435)
..... .....+.. ....... ..... ............+....+............ .+........ .
T Consensus 155 ----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (318)
T 2psd_A 155 ----WPDIE-EDIALIKSEEGEKMVLENNFFVETVLPSKIMRKLEPEEFAAYLEPFKEKGEVRRPTLSWPREIPLVKGGK 229 (318)
T ss_dssp ----SCSCH-HHHHHHHSTHHHHHHTTTCHHHHTHHHHTCSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHTCCBTTTSC
T ss_pred ----hhhHH-HHHHHHhcccchhhhhcchHHHHhhccccccccCCHHHHHHHHHhhcCccccccchhccccccccccccc
Confidence 00000 00000000 0000000 00000 000000000001111111100000000000 0000000000 0
Q ss_pred hhHHhhhhhhhhhhhhhcccc-cceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhc
Q 013862 153 LWKLELLKSASAYANARLDAV-KAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGA 231 (435)
Q Consensus 153 ~~~~~~~~~~~~~~~~~l~~i-~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~ 231 (435)
...... .....+.+.++ ++|+|+|+|++| ++++ ..+.+.+.+|+++++++ ++||++++|+|++|++.|.+
T Consensus 230 ~~~~~~----~~~~~~~l~~i~~~P~Lvi~G~~D-~~~~--~~~~~~~~~~~~~~~~i-~~gH~~~~e~p~~~~~~i~~- 300 (318)
T 2psd_A 230 PDVVQI----VRNYNAYLRASDDLPKLFIESDPG-FFSN--AIVEGAKKFPNTEFVKV-KGLHFLQEDAPDEMGKYIKS- 300 (318)
T ss_dssp HHHHHH----HHHHHHHHHTCTTSCEEEEEEEEC-SSHH--HHHHHHTTSSSEEEEEE-EESSSGGGTCHHHHHHHHHH-
T ss_pred chhHHH----HHHHHHHhccccCCCeEEEEeccc-cCcH--HHHHHHHhCCCcEEEEe-cCCCCCHhhCHHHHHHHHHH-
Confidence 000000 01123456677 999999999999 7775 48889999999999999 68999999999999999999
Q ss_pred cccccc
Q 013862 232 GYYRRG 237 (435)
Q Consensus 232 ~Fl~~~ 237 (435)
|+.+.
T Consensus 301 -fl~~~ 305 (318)
T 2psd_A 301 -FVERV 305 (318)
T ss_dssp -HHHHH
T ss_pred -HHHHh
Confidence 88644
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=99.83 E-value=2e-20 Score=169.06 Aligned_cols=207 Identities=15% Similarity=0.154 Sum_probs=118.6
Q ss_pred CccccccC-CCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccccccc
Q 013862 2 YGACIFQL-QIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQT 80 (435)
Q Consensus 2 yG~s~~p~-~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~ 80 (435)
+|.|..++ ...|+++++++|+.+++++++. ++++|+||||||.+|+.+|.++|++|+++|++++...........
T Consensus 66 ~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~----~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 141 (285)
T 3bwx_A 66 RGDSDYAKDPMTYQPMQYLQDLEALLAQEGI----ERFVAIGTSLGGLLTMLLAAANPARIAAAVLNDVGPEVSPEGLER 141 (285)
T ss_dssp BTTSCCCSSGGGCSHHHHHHHHHHHHHHHTC----CSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHHH
T ss_pred CCCCCCCCCccccCHHHHHHHHHHHHHhcCC----CceEEEEeCHHHHHHHHHHHhCchheeEEEEecCCcccCcchhHH
Confidence 57776554 3468999999999999999987 489999999999999999999999999999988653221110000
Q ss_pred ccccccccc--cchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhh-------cchhHHhccCCchh
Q 013862 81 IMPIPAELM--SGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMS-------SYLPVLANILPKET 151 (435)
Q Consensus 81 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~ 151 (435)
.... .... ..........+ ....... . .. ................. .+.......+....
T Consensus 142 ~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~-------~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (285)
T 3bwx_A 142 IRGY-VGQGRNFETWMHAARAL-QESSGDV-------Y-PD-WDITQWLRYAKRIMVLGSSGRIAFDYDMKIAEPFEAPV 210 (285)
T ss_dssp HHHH-TTCCCEESSHHHHHHHH-HHHHTTT-------S-TT-CCHHHHHHHHHHHEEECTTSCEEESBCGGGGCCTTSCT
T ss_pred HHHH-hcCCcccccHHHHHHHH-HHhhhhc-------c-cc-cChHHHHHHHHhhheeCCCCceeeccCHHHHHHHhhhh
Confidence 0000 0000 00000000000 0000000 0 00 00000000000000000 00000000000000
Q ss_pred hhhHHhhhhhhhhhhhhhcccc-cceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhh
Q 013862 152 LLWKLELLKSASAYANARLDAV-KAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKG 230 (435)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~l~~i-~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~ 230 (435)
...........+.++ ++|+|+|+|++|.+++++ ..+.+.+. +++++++++++||++++|+|+.+ +.|.+
T Consensus 211 -------~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~~~-~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~-~~i~~ 280 (285)
T 3bwx_A 211 -------GATPQVDMWPLFDALATRPLLVLRGETSDILSAQ-TAAKMASR-PGVELVTLPRIGHAPTLDEPESI-AAIGR 280 (285)
T ss_dssp -------TCCCSSCCHHHHHHHTTSCEEEEEETTCSSSCHH-HHHHHHTS-TTEEEEEETTCCSCCCSCSHHHH-HHHHH
T ss_pred -------hccccchhhHHHHHccCCCeEEEEeCCCCccCHH-HHHHHHhC-CCcEEEEeCCCCccchhhCchHH-HHHHH
Confidence 000000111223445 799999999999999988 68899999 99999999999999999999988 47888
Q ss_pred ccccc
Q 013862 231 AGYYR 235 (435)
Q Consensus 231 ~~Fl~ 235 (435)
|+.
T Consensus 281 --fl~ 283 (285)
T 3bwx_A 281 --LLE 283 (285)
T ss_dssp --HHT
T ss_pred --HHH
Confidence 775
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A | Back alignment and structure |
|---|
Probab=99.83 E-value=4.1e-20 Score=168.14 Aligned_cols=208 Identities=12% Similarity=0.035 Sum_probs=120.5
Q ss_pred CccccccCCC----CCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccc
Q 013862 2 YGACIFQLQI----GHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSL 77 (435)
Q Consensus 2 yG~s~~p~~~----~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~ 77 (435)
+|.|..+... .++++++++|+.+++++++. ++++|+||||||.+|+.+|.++|++|+++|++++........
T Consensus 70 ~G~S~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~----~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 145 (306)
T 3r40_A 70 YGWSDMPESDEQHTPYTKRAMAKQLIEAMEQLGH----VHFALAGHNRGARVSYRLALDSPGRLSKLAVLDILPTYEYWQ 145 (306)
T ss_dssp STTSCCCCCCTTCGGGSHHHHHHHHHHHHHHTTC----SSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCHHHHHH
T ss_pred CCCCCCCCCCcccCCCCHHHHHHHHHHHHHHhCC----CCEEEEEecchHHHHHHHHHhChhhccEEEEecCCCCccchh
Confidence 5777766654 78999999999999999977 589999999999999999999999999999999865322111
Q ss_pred ccccccc-----cc-cccc---------chhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhH
Q 013862 78 LQTIMPI-----PA-ELMS---------GQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPV 142 (435)
Q Consensus 78 ~~~~~~~-----~~-~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (435)
....... +. .... .................. .......+....+.....
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~-------- 209 (306)
T 3r40_A 146 RMNRAYALKIYHWSFLAQPAPLPENLLGGDPDFYVKAKLASWTRAG--------DLSAFDPRAVEHYRIAFA-------- 209 (306)
T ss_dssp HCSHHHHHHSTHHHHHTSCTTHHHHHHTSCHHHHHHHHHHHTSSSS--------SSTTSCHHHHHHHHHHHT--------
T ss_pred hhhhhhhhhhHHHHHhhcccchHHHHHcCCHHHHHHHHhhcccCCC--------ccccCCHHHHHHHHHHHc--------
Confidence 0000000 00 0000 000000000000000000 000011111111111100
Q ss_pred HhccCCchhhhhHHhhhhhh-------hhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCcc
Q 013862 143 LANILPKETLLWKLELLKSA-------SAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHF 215 (435)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~ 215 (435)
...........++.. .......+.++++|+|+|+|++|.+++.....+.+.+..++++++++ ++||+
T Consensus 210 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~-~~gH~ 283 (306)
T 3r40_A 210 -----DPMRRHVMCEDYRAGAYADFEHDKIDVEAGNKIPVPMLALWGASGIAQSAATPLDVWRKWASDVQGAPI-ESGHF 283 (306)
T ss_dssp -----SHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCBCSCEEEEEETTCC------CHHHHHHHBSSEEEEEE-SSCSC
T ss_pred -----cCCCcchhhHHHHhcccccchhhhhhhhhccCCCcceEEEEecCCcccCchhHHHHHHhhcCCCeEEEe-cCCcC
Confidence 000010111111110 00011256889999999999999999843257778888999999999 68999
Q ss_pred ccccCchhHHHHHhhccccccc
Q 013862 216 LFLEDGVDLVTTIKGAGYYRRG 237 (435)
Q Consensus 216 ~~~e~pe~~~~~I~~~~Fl~~~ 237 (435)
++.|+|+++++.|.+ |+++.
T Consensus 284 ~~~e~p~~~~~~i~~--fl~~~ 303 (306)
T 3r40_A 284 LPEEAPDQTAEALVR--FFSAA 303 (306)
T ss_dssp HHHHSHHHHHHHHHH--HHHC-
T ss_pred chhhChHHHHHHHHH--HHHhc
Confidence 999999999999999 88754
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=6e-21 Score=170.38 Aligned_cols=210 Identities=11% Similarity=0.040 Sum_probs=123.0
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
+|.|..++...++++++++|+.+++++++. .++++|+||||||.+|+.+|.++|++|+++|++++...........
T Consensus 50 ~G~S~~~~~~~~~~~~~~~~~~~~l~~l~~---~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~- 125 (267)
T 3sty_A 50 SGINPKQALQIPNFSDYLSPLMEFMASLPA---NEKIILVGHALGGLAISKAMETFPEKISVAVFLSGLMPGPNIDATT- 125 (267)
T ss_dssp STTCSCCGGGCCSHHHHHHHHHHHHHTSCT---TSCEEEEEETTHHHHHHHHHHHSGGGEEEEEEESCCCCBTTBCHHH-
T ss_pred CCCCCCcCCccCCHHHHHHHHHHHHHhcCC---CCCEEEEEEcHHHHHHHHHHHhChhhcceEEEecCCCCCCcchHHH-
Confidence 677777766669999999999999999842 2699999999999999999999999999999999875332211100
Q ss_pred cccccccccchhHHHHHHHH---HhhcCChhHHHHH---hhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhH
Q 013862 82 MPIPAELMSGQMTLTLSYLL---SLLTGDPLKMAMD---SIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWK 155 (435)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (435)
...... ............. ..................... ...................
T Consensus 126 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 190 (267)
T 3sty_A 126 --------------VCTKAGSAVLGQLDNCVTYENGPTNPPTTLIAGPKFLATNVYHLSP-IEDLALATALVRPLYLYLA 190 (267)
T ss_dssp --------------HHHHHHHTTTTCTTCEEECTTCTTSCCCEEECCHHHHHHHTSTTSC-HHHHHHHHHHCCCEECCCH
T ss_pred --------------HHHHhcccchhhhhhhhhhhhhhhcccchhhhhHHHHHHhhcccCC-HHHHHHHHHhhccchhHHH
Confidence 000000 0000000000000 000000000000000000000 0000000000000000000
Q ss_pred HhhhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhccccc
Q 013862 156 LELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYR 235 (435)
Q Consensus 156 ~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~ 235 (435)
.. +... .........++|+++|+|++|.+++++ ..+.+.+.++++++++++++||++++|+|+++++.|.+ |++
T Consensus 191 ~~-~~~~--~~~~~~~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~--fl~ 264 (267)
T 3sty_A 191 ED-ISKE--VVLSSKRYGSVKRVFIVATENDALKKE-FLKLMIEKNPPDEVKEIEGSDHVTMMSKPQQLFTTLLS--IAN 264 (267)
T ss_dssp HH-HHHH--CCCCTTTGGGSCEEEEECCCSCHHHHH-HHHHHHHHSCCSEEEECTTCCSCHHHHSHHHHHHHHHH--HHH
T ss_pred HH-hhcc--hhcccccccCCCEEEEEeCCCCccCHH-HHHHHHHhCCCceEEEeCCCCccccccChHHHHHHHHH--HHH
Confidence 00 0000 001112223799999999999999998 79999999999999999999999999999999999999 876
Q ss_pred c
Q 013862 236 R 236 (435)
Q Consensus 236 ~ 236 (435)
+
T Consensus 265 ~ 265 (267)
T 3sty_A 265 K 265 (267)
T ss_dssp H
T ss_pred h
Confidence 4
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=9.3e-20 Score=168.21 Aligned_cols=217 Identities=13% Similarity=0.105 Sum_probs=120.5
Q ss_pred Ccccccc--C-CCCCChHHHHHHHHHHHHHhh--hcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccc
Q 013862 2 YGACIFQ--L-QIGHHFTGLLKLIERTIRSEN--CRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKS 76 (435)
Q Consensus 2 yG~s~~p--~-~~~~s~~~~a~dl~~~l~~l~--~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~ 76 (435)
||.|..+ . ...|+++++++|+.+++++++ . ++++|+||||||.+|+.+|.++|++|+++|+++++......
T Consensus 69 ~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~----~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~ 144 (328)
T 2cjp_A 69 YGDTTGAPLNDPSKFSILHLVGDVVALLEAIAPNE----EKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSVHFSKRNP 144 (328)
T ss_dssp STTCBCCCTTCGGGGSHHHHHHHHHHHHHHHCTTC----SSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCS
T ss_pred CCCCCCcCcCCcccccHHHHHHHHHHHHHHhcCCC----CCeEEEEECHHHHHHHHHHHhChhheeEEEEEccCCCcccc
Confidence 6788765 2 346899999999999999998 6 58999999999999999999999999999999865321100
Q ss_pred ---cccccc-----ccccccc--cchhH----H-HHHHHHHhhcC--Chh---HHHHHhhhh---------ccchhHHHH
Q 013862 77 ---LLQTIM-----PIPAELM--SGQMT----L-TLSYLLSLLTG--DPL---KMAMDSIVK---------GLFLQSTIQ 127 (435)
Q Consensus 77 ---~~~~~~-----~~~~~~~--~~~~~----~-~~~~~~~~~~~--~~~---~~~~~~~~~---------~~~~~~~~~ 127 (435)
...... ....... ..... . ........... ... ......... .....+...
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (328)
T 2cjp_A 145 KMNVVEGLKAIYGEDHYISRFQVPGEIEAEFAPIGAKSVLKKILTYRDPAPFYFPKGKGLEAIPDAPVALSSWLSEEELD 224 (328)
T ss_dssp SCCHHHHHHHHHCTTBHHHHTSSTTHHHHHHHHHCHHHHHHHHHTCCCSSCCBCCTTCTTTTSCCCCGGGGTTSCHHHHH
T ss_pred cCChHHHHHhhcccchHHHhhhCCCcHHHHhhccCHHHHHHHHhcccCCCcccccccchhhhcccccccCcCCCCHHHHH
Confidence 000000 0000000 00000 0 00000000000 000 000000000 000000000
Q ss_pred HhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhh-hhhcccccceEEEEeeCCCCCCCChh---H--HHHHHhhC
Q 013862 128 ERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYA-NARLDAVKAQTLILCSGRDQLLPSEE---E--GDRLCRAL 201 (435)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~i~~Pvlii~G~~D~~~~~~~---~--~~~~~~~~ 201 (435)
.+... +..........+. ..+....... ...+.++++|+|+|+|++|.+++... . .+.+.+.+
T Consensus 225 ~~~~~----------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~ 293 (328)
T 2cjp_A 225 YYANK----------FEQTGFTGAVNYY-RALPINWELTAPWTGAQVKVPTKFIVGEFDLVYHIPGAKEYIHNGGFKKDV 293 (328)
T ss_dssp HHHHH----------HHHHCSHHHHHHH-HTHHHHHHHTGGGTTCCCCSCEEEEEETTCGGGGSTTHHHHHHHSHHHHHS
T ss_pred HHHHH----------hcccCCcchHHHH-HhcccchhhhhhccCCccCCCEEEEEeCCcccccCcchhhhhhhhhHHHHh
Confidence 00000 0000000000000 0000000000 11457899999999999999998741 1 25677889
Q ss_pred CCc-eEEEeCCCCccccccCchhHHHHHhhccccc
Q 013862 202 PNC-QTRRFGGGGHFLFLEDGVDLVTTIKGAGYYR 235 (435)
Q Consensus 202 ~~~-~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~ 235 (435)
|++ ++++++++||++++|+|+++++.|.+ |+.
T Consensus 294 p~~~~~~~i~~~gH~~~~e~p~~~~~~i~~--fl~ 326 (328)
T 2cjp_A 294 PLLEEVVVLEGAAHFVSQERPHEISKHIYD--FIQ 326 (328)
T ss_dssp TTBCCCEEETTCCSCHHHHSHHHHHHHHHH--HHT
T ss_pred cCCeeEEEcCCCCCCcchhCHHHHHHHHHH--HHH
Confidence 999 89999999999999999999999999 875
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A | Back alignment and structure |
|---|
Probab=99.82 E-value=4.6e-20 Score=167.72 Aligned_cols=217 Identities=12% Similarity=0.015 Sum_probs=127.0
Q ss_pred CccccccCC---CCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccccc
Q 013862 2 YGACIFQLQ---IGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLL 78 (435)
Q Consensus 2 yG~s~~p~~---~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~ 78 (435)
+|.|..+.. ..++++++++|+.+++++++. +++++|+||||||.+|+.+|.++|++|+++|++++.........
T Consensus 66 ~G~S~~~~~~~~~~~~~~~~~~~~~~~l~~l~~---~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 142 (302)
T 1mj5_A 66 MGDSDKLDPSGPERYAYAEHRDYLDALWEALDL---GDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWAD 142 (302)
T ss_dssp STTSCCCSSCSTTSSCHHHHHHHHHHHHHHTTC---TTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGG
T ss_pred CCCCCCCCCCCcccccHHHHHHHHHHHHHHhCC---CceEEEEEECCccHHHHHHHHHCHHHHhheeeecccCCchhhhh
Confidence 566664422 128999999999999999876 14899999999999999999999999999999998754221100
Q ss_pred ccccccccccccchhHHHHHHHHHh----hcCChhHHHHHhhh---hccchhHHHHHhHHhHHhhhcchhHH---hccCC
Q 013862 79 QTIMPIPAELMSGQMTLTLSYLLSL----LTGDPLKMAMDSIV---KGLFLQSTIQERSQDFVAMSSYLPVL---ANILP 148 (435)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 148 (435)
...........+... .............. ......+....+.............. ...+.
T Consensus 143 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (302)
T 1mj5_A 143 ----------FPEQDRDLFQAFRSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIP 212 (302)
T ss_dssp ----------SCGGGHHHHHHHHSTTHHHHHTTTCHHHHTHHHHTSSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSC
T ss_pred ----------hhHHHHHHHHHHhccchhhhhcChHHHHHHHHHhcCcccCCHHHHHHHHHHhhcccccccchHHHHHhcc
Confidence 000000011110000 00000000000000 00111111111111000000000000 00000
Q ss_pred chhhhhHHhhhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHH
Q 013862 149 KETLLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTI 228 (435)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I 228 (435)
...... .+..........+.++++|+|+|+|++|.+++++ ..+.+.+.+++ +++++ ++||+++.|+|+++++.|
T Consensus 213 ~~~~~~---~~~~~~~~~~~~l~~i~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~-~~~~~-~~gH~~~~e~p~~~~~~i 286 (302)
T 1mj5_A 213 IAGTPA---DVVAIARDYAGWLSESPIPKLFINAEPGALTTGR-MRDFCRTWPNQ-TEITV-AGAHFIQEDSPDEIGAAI 286 (302)
T ss_dssp BTTBSH---HHHHHHHHHHHHHTTCCSCEEEEEEEECSSSSHH-HHHHHTTCSSE-EEEEE-EESSCGGGTCHHHHHHHH
T ss_pred ccccch---hhHHHHHHHHhhhhccCCCeEEEEeCCCCCCChH-HHHHHHHhcCC-ceEEe-cCcCcccccCHHHHHHHH
Confidence 000000 0001112234667889999999999999999998 79999999999 99999 999999999999999999
Q ss_pred hhccccccccc
Q 013862 229 KGAGYYRRGRI 239 (435)
Q Consensus 229 ~~~~Fl~~~~~ 239 (435)
.+ |+.+...
T Consensus 287 ~~--fl~~~~~ 295 (302)
T 1mj5_A 287 AA--FVRRLRP 295 (302)
T ss_dssp HH--HHHHHSC
T ss_pred HH--HHHhhcc
Confidence 99 8875543
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=99.82 E-value=5e-20 Score=168.82 Aligned_cols=206 Identities=15% Similarity=0.121 Sum_probs=127.7
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
||.|. .+...++++++++|+.+++++++. ++++|+||||||.+++.+|.++|++|+++|++++............
T Consensus 105 ~G~S~-~~~~~~~~~~~~~dl~~~l~~l~~----~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 179 (314)
T 3kxp_A 105 HGLSD-KPETGYEANDYADDIAGLIRTLAR----GHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIETEALDAL 179 (314)
T ss_dssp STTSC-CCSSCCSHHHHHHHHHHHHHHHTS----SCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCTTCCHHHHHHH
T ss_pred cCCCC-CCCCCCCHHHHHHHHHHHHHHhCC----CCcEEEEECchHHHHHHHHHhChhheeEEEEeCCCCCCCcchhhHH
Confidence 56666 455678999999999999999987 5899999999999999999999999999999998754322211100
Q ss_pred cccccc---cccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhh
Q 013862 82 MPIPAE---LMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLEL 158 (435)
Q Consensus 82 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (435)
... .. ............+.... .................. ............ .....
T Consensus 180 ~~~-~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~---~~~~~ 239 (314)
T 3kxp_A 180 EAR-VNAGSQLFEDIKAVEAYLAGRY--------------PNIPADAIRIRAESGYQP--VDGGLRPLASSA---AMAQT 239 (314)
T ss_dssp HHH-TTTTCSCBSSHHHHHHHHHHHS--------------TTSCHHHHHHHHHHSEEE--ETTEEEESSCHH---HHHHH
T ss_pred HHH-hhhchhhhcCHHHHHHHHHhhc--------------ccCchHHHHHHhhhhhcc--cccccccccChh---hhhhh
Confidence 000 00 00000000111110000 000011111111100000 000000000000 00000
Q ss_pred hhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhccccc
Q 013862 159 LKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYR 235 (435)
Q Consensus 159 ~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~ 235 (435)
...........+.++++|+|+++|++|.+++.+ ..+.+.+.++++++++++++||+++.|+|+++++.|.+ |++
T Consensus 240 ~~~~~~~~~~~~~~i~~P~Lii~G~~D~~~~~~-~~~~~~~~~~~~~~~~~~g~gH~~~~e~~~~~~~~i~~--fl~ 313 (314)
T 3kxp_A 240 ARGLRSDLVPAYRDVTKPVLIVRGESSKLVSAA-ALAKTSRLRPDLPVVVVPGADHYVNEVSPEITLKAITN--FID 313 (314)
T ss_dssp HHHTTSCCHHHHHHCCSCEEEEEETTCSSSCHH-HHHHHHHHCTTSCEEEETTCCSCHHHHCHHHHHHHHHH--HHH
T ss_pred ccccCcchhhHhhcCCCCEEEEecCCCccCCHH-HHHHHHHhCCCceEEEcCCCCCcchhhCHHHHHHHHHH--HHh
Confidence 001111234566789999999999999999998 79999999999999999999999999999999999999 775
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A | Back alignment and structure |
|---|
Probab=99.82 E-value=4.2e-20 Score=166.95 Aligned_cols=188 Identities=14% Similarity=0.088 Sum_probs=115.8
Q ss_pred CChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccccch
Q 013862 13 HHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQ 92 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (435)
++++++++|+.+++++++. ++++|+||||||.+|+.+|.++|++|+++|++++........ .
T Consensus 92 ~~~~~~~~~l~~~l~~l~~----~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~---------~----- 153 (286)
T 2qmq_A 92 PSLDQLADMIPCILQYLNF----STIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDPNAKGWM---------D----- 153 (286)
T ss_dssp CCHHHHHHTHHHHHHHHTC----CCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCHH---------H-----
T ss_pred cCHHHHHHHHHHHHHHhCC----CcEEEEEEChHHHHHHHHHHhChhheeeEEEECCCCcccchh---------h-----
Confidence 4999999999999999987 489999999999999999999999999999999875321100 0
Q ss_pred hHHHHHHHHHhhcCChhHHHHHh-hhhc--cchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhh--hhh
Q 013862 93 MTLTLSYLLSLLTGDPLKMAMDS-IVKG--LFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASA--YAN 167 (435)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 167 (435)
.................... .... .............. ...............+..... ...
T Consensus 154 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (286)
T 2qmq_A 154 ---WAAHKLTGLTSSIPDMILGHLFSQEELSGNSELIQKYRGII----------QHAPNLENIELYWNSYNNRRDLNFER 220 (286)
T ss_dssp ---HHHHHHHHTTSCHHHHHHHHHSCHHHHHTTCHHHHHHHHHH----------HTCTTHHHHHHHHHHHHTCCCCCSEE
T ss_pred ---hhhhhhccccccchHHHHHHHhcCCCCCcchHHHHHHHHHH----------HhcCCcchHHHHHHHHhhhhhhhhhh
Confidence 00000000000000000000 0000 00000111111100 000111111111111111000 012
Q ss_pred hhcccccceEEEEeeCCCCCCCChhHHHHHHhhCC-CceEEEeCCCCccccccCchhHHHHHhhccccc
Q 013862 168 ARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALP-NCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYR 235 (435)
Q Consensus 168 ~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~ 235 (435)
..+.++++|+|+|+|++|.+++ . ..+.+.+..+ ++++++++++||+++.|+|+++++.|.+ |++
T Consensus 221 ~~l~~i~~P~lii~G~~D~~~~-~-~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~--fl~ 285 (286)
T 2qmq_A 221 GGETTLKCPVMLVVGDQAPHED-A-VVECNSKLDPTQTSFLKMADSGGQPQLTQPGKLTEAFKY--FLQ 285 (286)
T ss_dssp TTEECCCSCEEEEEETTSTTHH-H-HHHHHHHSCGGGEEEEEETTCTTCHHHHCHHHHHHHHHH--HHC
T ss_pred chhccCCCCEEEEecCCCcccc-H-HHHHHHHhcCCCceEEEeCCCCCcccccChHHHHHHHHH--Hhc
Confidence 4677899999999999999998 5 5777777777 8999999999999999999999999999 775
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.7e-19 Score=161.99 Aligned_cols=207 Identities=18% Similarity=0.146 Sum_probs=124.8
Q ss_pred CccccccC-CCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccccccc
Q 013862 2 YGACIFQL-QIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQT 80 (435)
Q Consensus 2 yG~s~~p~-~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~ 80 (435)
+|.|..+. ...++++++++|+.+++++++. ++++++||||||.+++.+|.++|++|+++|++++..........
T Consensus 64 ~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~- 138 (286)
T 3qit_A 64 HGRSSHLEMVTSYSSLTFLAQIDRVIQELPD----QPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPAEESKKE- 138 (286)
T ss_dssp STTSCCCSSGGGCSHHHHHHHHHHHHHHSCS----SCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCC---C-
T ss_pred CCCCCCCCCCCCcCHHHHHHHHHHHHHhcCC----CCEEEEEeCHHHHHHHHHHHhChhhccEEEEecCCCCCccccch-
Confidence 56665554 3578999999999999999977 58999999999999999999999999999999988643322100
Q ss_pred ccccccccccchhHHHHHHHHHhhcCCh--------hHHHHH-hhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchh
Q 013862 81 IMPIPAELMSGQMTLTLSYLLSLLTGDP--------LKMAMD-SIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKET 151 (435)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (435)
. ....+........... ...... ...................... ............
T Consensus 139 -------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~- 204 (286)
T 3qit_A 139 -------S----AVNQLTTCLDYLSSTPQHPIFPDVATAASRLRQAIPSLSEEFSYILAQRITQP--NQGGVRWSWDAI- 204 (286)
T ss_dssp -------C----HHHHHHHHHHHHTCCCCCCCBSSHHHHHHHHHHHSTTSCHHHHHHHHHHTEEE--ETTEEEECSCGG-
T ss_pred -------h----hhHHHHHHHHHHhccccccccccHHHHHHHhhcCCcccCHHHHHHHhhccccc--cccceeeeechh-
Confidence 0 0001111111110000 000000 0000001111111111110000 000000000000
Q ss_pred hhhHHhhhhh-----hhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHH
Q 013862 152 LLWKLELLKS-----ASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVT 226 (435)
Q Consensus 152 ~~~~~~~~~~-----~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~ 226 (435)
......... ........+.++++|+++++|++|.+++.+ ..+.+.+.+++++++++++ ||++++|+|+++++
T Consensus 205 -~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~g-gH~~~~e~p~~~~~ 281 (286)
T 3qit_A 205 -IRTRSILGLNNLPGGRSQYLEMLKSIQVPTTLVYGDSSKLNRPE-DLQQQKMTMTQAKRVFLSG-GHNLHIDAAAALAS 281 (286)
T ss_dssp -GGGHHHHTTTSCTTHHHHHHHHHHHCCSCEEEEEETTCCSSCHH-HHHHHHHHSTTSEEEEESS-SSCHHHHTHHHHHH
T ss_pred -hhccccccccccccchhHHHHHHhccCCCeEEEEeCCCcccCHH-HHHHHHHHCCCCeEEEeeC-CchHhhhChHHHHH
Confidence 000000000 222334567889999999999999999998 7899999999999999999 99999999999999
Q ss_pred HHhh
Q 013862 227 TIKG 230 (435)
Q Consensus 227 ~I~~ 230 (435)
.|.+
T Consensus 282 ~i~~ 285 (286)
T 3qit_A 282 LILT 285 (286)
T ss_dssp HHHC
T ss_pred Hhhc
Confidence 9875
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A | Back alignment and structure |
|---|
Probab=99.82 E-value=4.8e-20 Score=167.00 Aligned_cols=214 Identities=11% Similarity=0.025 Sum_probs=125.1
Q ss_pred CccccccCCCC----CChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccc
Q 013862 2 YGACIFQLQIG----HHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSL 77 (435)
Q Consensus 2 yG~s~~p~~~~----~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~ 77 (435)
+|.|..+. .. ++++++++|+.+++++++. +++++|+||||||.+++.+|.++|++|+++|++++........
T Consensus 65 ~G~S~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~ 140 (297)
T 2qvb_A 65 MGASDKLS-PSGPDRYSYGEQRDFLFALWDALDL---GDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVTPMTWA 140 (297)
T ss_dssp STTSCCCS-SCSTTSSCHHHHHHHHHHHHHHTTC---CSCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECCSCBCGG
T ss_pred CCCCCCCC-CccccCcCHHHHHHHHHHHHHHcCC---CCceEEEEeCchHHHHHHHHHhChHhhheeeEeccccCCccCC
Confidence 56665442 33 8999999999999999976 1489999999999999999999999999999999875422110
Q ss_pred cccccccccccccchhHHHHHHHHHh-----hc-CChh-HHHHHhhhhccchhHHHHHhHHhHHhh---hcchhHHhccC
Q 013862 78 LQTIMPIPAELMSGQMTLTLSYLLSL-----LT-GDPL-KMAMDSIVKGLFLQSTIQERSQDFVAM---SSYLPVLANIL 147 (435)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 147 (435)
. . ..........+... .. .... ..............+....+....... ......+....
T Consensus 141 ~--~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (297)
T 2qvb_A 141 D--W--------PPAVRGVFQGFRSPQGEPMALEHNIFVERVLPGAILRQLSDEEMNHYRRPFVNGGEDRRPTLSWPRNL 210 (297)
T ss_dssp G--S--------CGGGHHHHHHHTSTTHHHHHHTTCHHHHTHHHHTCSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHHS
T ss_pred C--C--------ChHHHHHHHHHhcccchhhhccccHHHHHHHhccccccCCHHHHHHHHHHhcCcccchhhHHHHHHhc
Confidence 0 0 00000000000000 00 0000 000000000001111111111100000 00000000000
Q ss_pred CchhhhhHHhhhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHH
Q 013862 148 PKETLLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTT 227 (435)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~ 227 (435)
...... ..+..........+.++++|+|+|+|++|.+++.+ ..+.+.+.+++ +++++ ++||+++.|+|+++++.
T Consensus 211 ~~~~~~---~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~-~~~~~~~~~~~-~~~~~-~~gH~~~~~~p~~~~~~ 284 (297)
T 2qvb_A 211 PIDGEP---AEVVALVNEYRSWLEETDMPKLFINAEPGAIITGR-IRDYVRSWPNQ-TEITV-PGVHFVQEDSPEEIGAA 284 (297)
T ss_dssp CBTTBS---HHHHHHHHHHHHHHHHCCSCEEEEEEEECSSSCHH-HHHHHHTSSSE-EEEEE-EESSCGGGTCHHHHHHH
T ss_pred cccCCc---hhhHHHHHHHHhhcccccccEEEEecCCCCcCCHH-HHHHHHHHcCC-eEEEe-cCccchhhhCHHHHHHH
Confidence 000000 00001112234567789999999999999999998 79999999999 99999 99999999999999999
Q ss_pred Hhhccccccc
Q 013862 228 IKGAGYYRRG 237 (435)
Q Consensus 228 I~~~~Fl~~~ 237 (435)
|.+ |+++.
T Consensus 285 i~~--fl~~~ 292 (297)
T 2qvb_A 285 IAQ--FVRRL 292 (297)
T ss_dssp HHH--HHHHH
T ss_pred HHH--HHHHH
Confidence 999 88643
|
| >4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A | Back alignment and structure |
|---|
Probab=99.81 E-value=6.4e-20 Score=165.47 Aligned_cols=189 Identities=17% Similarity=0.207 Sum_probs=119.9
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
||.|.-+ ...++++++++|+.++++.+... .++++|+||||||.+|+.+|.++|++|+++|+++++...........
T Consensus 89 hG~S~~~-~~~~~~~~~~~d~~~~~~~l~~~--~~~v~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 165 (281)
T 4fbl_A 89 HGTTPAE-MAASTASDWTADIVAAMRWLEER--CDVLFMTGLSMGGALTVWAAGQFPERFAGIMPINAALRMESPDLAAL 165 (281)
T ss_dssp SSSCHHH-HHTCCHHHHHHHHHHHHHHHHHH--CSEEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCSCCCCHHHHHH
T ss_pred CCCCCcc-ccCCCHHHHHHHHHHHHHHHHhC--CCeEEEEEECcchHHHHHHHHhCchhhhhhhcccchhcccchhhHHH
Confidence 4555432 23578999999999999998543 25899999999999999999999999999999998753221110000
Q ss_pred cccccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhh
Q 013862 82 MPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKS 161 (435)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (435)
. +......... ....... . ....... ....+..... . +..
T Consensus 166 ~------------------~~~~~~~~~~----~~~~~~~-~----~~~~~~~---------~~~~~~~~~~---~-~~~ 205 (281)
T 4fbl_A 166 A------------------FNPDAPAELP----GIGSDIK-A----EGVKELA---------YPVTPVPAIK---H-LIT 205 (281)
T ss_dssp H------------------TCTTCCSEEE----CCCCCCS-S----TTCCCCC---------CSEEEGGGHH---H-HHH
T ss_pred H------------------HhHhhHHhhh----cchhhhh-h----HHHHHhh---------hccCchHHHH---H-HHH
Confidence 0 0000000000 0000000 0 0000000 0000000000 0 111
Q ss_pred hhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCC--ceEEEeCCCCcccccc-CchhHHHHHhhcccccc
Q 013862 162 ASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPN--CQTRRFGGGGHFLFLE-DGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 162 ~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e-~pe~~~~~I~~~~Fl~~ 236 (435)
........+.++++|+|+|+|++|.+++++ .++.+.+.+++ .++++++++||.++.| +++++.+.|.+ ||++
T Consensus 206 ~~~~~~~~l~~i~~P~Lii~G~~D~~v~~~-~~~~l~~~l~~~~~~l~~~~~~gH~~~~e~~~e~v~~~i~~--FL~~ 280 (281)
T 4fbl_A 206 IGAVAEMLLPRVKCPALIIQSREDHVVPPH-NGELIYNGIGSTEKELLWLENSYHVATLDNDKELILERSLA--FIRK 280 (281)
T ss_dssp HHHHHHHHGGGCCSCEEEEEESSCSSSCTH-HHHHHHHHCCCSSEEEEEESSCCSCGGGSTTHHHHHHHHHH--HHHT
T ss_pred hhhhccccccccCCCEEEEEeCCCCCcCHH-HHHHHHHhCCCCCcEEEEECCCCCcCccccCHHHHHHHHHH--HHHh
Confidence 111234567889999999999999999999 79999998865 4899999999999888 58999999999 8864
|
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=5.7e-19 Score=161.98 Aligned_cols=222 Identities=15% Similarity=0.091 Sum_probs=121.2
Q ss_pred CccccccCC-CCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccccccc
Q 013862 2 YGACIFQLQ-IGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQT 80 (435)
Q Consensus 2 yG~s~~p~~-~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~ 80 (435)
||.|..+.. ..++++++++|+.+++++++. ++++|+||||||.+|+.+|.++|++|+++|++++...........
T Consensus 74 ~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~~----~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 149 (317)
T 1wm1_A 74 CGRSRPHASLDNNTTWHLVADIERLREMAGV----EQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRLHWY 149 (317)
T ss_dssp STTCBSTTCCTTCSHHHHHHHHHHHHHHTTC----SSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHH
T ss_pred CCCCCCCcccccccHHHHHHHHHHHHHHcCC----CcEEEEEeCHHHHHHHHHHHHCChheeeeeEeccCCCchhhhhHH
Confidence 677764432 468999999999999999988 489999999999999999999999999999998764221100000
Q ss_pred ccccccccccchhHHHHHHHHHhhcCChhHHHHHhhhh-ccchhHHH-H---HhHHhHHhhhc-c--hhHHhccCCchhh
Q 013862 81 IMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVK-GLFLQSTI-Q---ERSQDFVAMSS-Y--LPVLANILPKETL 152 (435)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~---~~~~~~~~~~~-~--~~~~~~~~~~~~~ 152 (435)
.... .... .......+...............+.. ........ . ........... . ...... +.....
T Consensus 150 ~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 224 (317)
T 1wm1_A 150 YQDG-ASRF---FPEKWERVLSILSDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESAS-FGEDDF 224 (317)
T ss_dssp HTSS-GGGT---SHHHHHHHHTTSCTTGGGCHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTSSSSCCGGGGG-GGCHHH
T ss_pred hhcc-chhh---cHHHHHHHHhhccchhhcchHHHHHhhhcCCCccccccccccccccccchhhccCCccccc-ccccch
Confidence 0000 0000 00000000000000000000000000 00000000 0 00000000000 0 000000 000000
Q ss_pred hhHH-----hh-----hhhhhhhhhhhccccc-ceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCcccccc-C
Q 013862 153 LWKL-----EL-----LKSASAYANARLDAVK-AQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLE-D 220 (435)
Q Consensus 153 ~~~~-----~~-----~~~~~~~~~~~l~~i~-~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e-~ 220 (435)
.... .. +........+.+.+++ +|+|+|+|++|.++++. ..+.+.+.+|++++++++++||+++.+ .
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~lii~G~~D~~~~~~-~~~~l~~~~p~~~~~~i~~~gH~~~~~~~ 303 (317)
T 1wm1_A 225 ALAFARIENHYFTHLGFLESDDQLLRNVPLIRHIPAVIVHGRYDMACQVQ-NAWDLAKAWPEAELHIVEGAGHSYDEPGI 303 (317)
T ss_dssp HHHHHHHHHHHHHTGGGCSSTTHHHHTGGGGTTSCEEEEEETTCSSSCHH-HHHHHHHHCTTSEEEEETTCCSSTTSHHH
T ss_pred hhhHHHhhhhhhhcccccccchhhHhhcccccCCCEEEEEecCCCCCCHH-HHHHHHhhCCCceEEEECCCCCCCCCcch
Confidence 0000 00 0000000234566785 99999999999999988 689999999999999999999998765 6
Q ss_pred chhHHHHHhhccccc
Q 013862 221 GVDLVTTIKGAGYYR 235 (435)
Q Consensus 221 pe~~~~~I~~~~Fl~ 235 (435)
++++.+.|.+ |+.
T Consensus 304 ~~~~~~~i~~--f~~ 316 (317)
T 1wm1_A 304 LHQLMIATDR--FAG 316 (317)
T ss_dssp HHHHHHHHHH--HTC
T ss_pred HHHHHHHHHH--Hhc
Confidence 8899999998 775
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=99.81 E-value=3.9e-19 Score=157.97 Aligned_cols=201 Identities=15% Similarity=0.146 Sum_probs=121.4
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
+|.|..+. .++++++++|+.+++++++ . +++|+||||||.+++.+|.++| +|+++|++++............
T Consensus 60 ~G~S~~~~--~~~~~~~~~~~~~~~~~l~-~----~~~l~G~S~Gg~ia~~~a~~~p-~v~~lvl~~~~~~~~~~~~~~~ 131 (262)
T 3r0v_A 60 RGDSGDTP--PYAVEREIEDLAAIIDAAG-G----AAFVFGMSSGAGLSLLAAASGL-PITRLAVFEPPYAVDDSRPPVP 131 (262)
T ss_dssp STTCCCCS--SCCHHHHHHHHHHHHHHTT-S----CEEEEEETHHHHHHHHHHHTTC-CEEEEEEECCCCCCSTTSCCCC
T ss_pred CcCCCCCC--CCCHHHHHHHHHHHHHhcC-C----CeEEEEEcHHHHHHHHHHHhCC-CcceEEEEcCCcccccccchhh
Confidence 56665443 7899999999999999986 3 8999999999999999999999 9999999998764332211000
Q ss_pred cccccccccchhHHHHHHHHHhhcCChhHHHHHhhhh-ccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhh
Q 013862 82 MPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVK-GLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLK 160 (435)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (435)
......+...... ............. ...+.+......... ......... ..........
T Consensus 132 ---------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~--~~~~~~~~~~- 192 (262)
T 3r0v_A 132 ---------PDYQTRLDALLAE--GRRGDAVTYFMTEGVGVPPDLVAQMQQAP-----MWPGMEAVA--HTLPYDHAVM- 192 (262)
T ss_dssp ---------TTHHHHHHHHHHT--TCHHHHHHHHHHHTSCCCHHHHHHHHTST-----THHHHHHTG--GGHHHHHHHH-
T ss_pred ---------hHHHHHHHHHhhc--cchhhHHHHHhhcccCCCHHHHHHHHhhh-----cccchHHHH--hhhhhhhhhh-
Confidence 0011111111000 0000000000000 011111111111000 000000000 0000000000
Q ss_pred hhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhccccc
Q 013862 161 SASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYR 235 (435)
Q Consensus 161 ~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~ 235 (435)
.........+.++++|+++++|++|.+++.+ ..+.+.+.++++++++++++|| +++|+++++.|.+ |++
T Consensus 193 ~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~gH---~~~p~~~~~~i~~--fl~ 261 (262)
T 3r0v_A 193 GDNTIPTARFASISIPTLVMDGGASPAWIRH-TAQELADTIPNARYVTLENQTH---TVAPDAIAPVLVE--FFT 261 (262)
T ss_dssp TTSCCCHHHHTTCCSCEEEEECTTCCHHHHH-HHHHHHHHSTTEEEEECCCSSS---SCCHHHHHHHHHH--HHC
T ss_pred hcCCCCHHHcCcCCCCEEEEeecCCCCCCHH-HHHHHHHhCCCCeEEEecCCCc---ccCHHHHHHHHHH--HHh
Confidence 0011123567788999999999999999988 7999999999999999999999 4799999999999 775
|
| >3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.2e-19 Score=168.66 Aligned_cols=213 Identities=12% Similarity=0.076 Sum_probs=122.3
Q ss_pred CCChHHHHHHHHHHHHHhhhcCCCCCEE-EEEeChhHHHHHHHHHhCCCceeEEEE-ecCCcccccccccccc-------
Q 013862 12 GHHFTGLLKLIERTIRSENCRSSNRPVY-LVGESLGACLALAVAARNPDMDLVLIL-ANPATSFRKSLLQTIM------- 82 (435)
Q Consensus 12 ~~s~~~~a~dl~~~l~~l~~~~~~~~~~-lvGhS~Gg~va~~~a~~~p~~v~~lVl-i~~~~~~~~~~~~~~~------- 82 (435)
.|+++++++|+.+++++++. ++++ |+||||||.+|+.+|.++|++|+++|+ +++.............
T Consensus 126 ~~~~~~~~~d~~~~l~~l~~----~~~~ilvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 201 (377)
T 3i1i_A 126 VFTFLDVARMQCELIKDMGI----ARLHAVMGPSAGGMIAQQWAVHYPHMVERMIGVITNPQNPIITSVNVAQNAIEAIR 201 (377)
T ss_dssp CCCHHHHHHHHHHHHHHTTC----CCBSEEEEETHHHHHHHHHHHHCTTTBSEEEEESCCSBCCHHHHHHTTHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHcCC----CcEeeEEeeCHhHHHHHHHHHHChHHHHHhcccCcCCCcCCchhhHHHHHHHHHHh
Confidence 57999999999999999988 4775 999999999999999999999999999 7666431111000000
Q ss_pred --ccccc-----cccchhHHHHHHHHHhhcCChhHHHHHhhhhccch---------hHHHHHhHHhHHhhhcchhHHhcc
Q 013862 83 --PIPAE-----LMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFL---------QSTIQERSQDFVAMSSYLPVLANI 146 (435)
Q Consensus 83 --~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~ 146 (435)
..+.. ..+.................... ....+...... +.....+...... .....
T Consensus 202 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 274 (377)
T 3i1i_A 202 LDPSWKGGKYGEEQPMKGLQLANRMMFMNAFDEHF-YETTYPRNSIEVEPYEKVSSLTSFEKEINKLTY------RSIEL 274 (377)
T ss_dssp HSGGGGGGCCTTSCCHHHHHHHHHHHHTTSSCHHH-HHHHSCCCSSCCGGGTCTTCCCHHHHHHHHHHH------HTTTT
T ss_pred cCCCccCCccccCCccchHHHHHHHHhhhcCCHHH-HHHHhhhhhccccccccccchhHHHHHHHHHHh------hhhcc
Confidence 00000 00000000000000000000000 00000000000 0001111111000 00111
Q ss_pred CCchhhhhHHhhhhhh-----hhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhC----CCceEEEeCC-CCccc
Q 013862 147 LPKETLLWKLELLKSA-----SAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRAL----PNCQTRRFGG-GGHFL 216 (435)
Q Consensus 147 ~~~~~~~~~~~~~~~~-----~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~----~~~~~~~i~~-~gH~~ 216 (435)
.....+......+... .....+.+.++++|+|+|+|++|.+++++ ..+.+.+.+ ++++++++++ +||++
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~-~~~~~~~~~~~~g~~~~~~~i~~~~gH~~ 353 (377)
T 3i1i_A 275 VDANSWMYTAKAVLLHDIAHGFSSLEEALSNVEANVLMIPCKQDLLQPSR-YNYKMVDLLQKQGKYAEVYEIESINGHMA 353 (377)
T ss_dssp CCHHHHHHHHHHHHHCBTTTTSSCHHHHHHTCCSEEEEECBTTCSSSCTH-HHHHHHHHHHHTTCCEEECCBCCTTGGGH
T ss_pred cCHHHHHHHHHHHhhcccccccCCHHHHHhhCCCCEEEEecCCccccCHH-HHHHHHHHHHhcCCCceEEEcCCCCCCcc
Confidence 1111111111111100 01124567889999999999999999999 789999988 9999999998 99999
Q ss_pred cccCchhHHHHHhhcccccccc
Q 013862 217 FLEDGVDLVTTIKGAGYYRRGR 238 (435)
Q Consensus 217 ~~e~pe~~~~~I~~~~Fl~~~~ 238 (435)
++|+|+++++.|.+ |+++..
T Consensus 354 ~~e~p~~~~~~i~~--fl~~~~ 373 (377)
T 3i1i_A 354 GVFDIHLFEKKVYE--FLNRKV 373 (377)
T ss_dssp HHHCGGGTHHHHHH--HHHSCC
T ss_pred hhcCHHHHHHHHHH--HHHhhh
Confidence 99999999999999 887553
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=8.2e-19 Score=159.05 Aligned_cols=210 Identities=14% Similarity=0.110 Sum_probs=130.2
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
+|.|..+....++++++++|+.++++.+....+.++++|+||||||.+++.+|.++|++|+++|++++.........
T Consensus 80 ~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~--- 156 (303)
T 3pe6_A 80 HGQSEGERMVVSDFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESA--- 156 (303)
T ss_dssp STTSCSSTTCCSSTHHHHHHHHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCSSSBCHHHH---
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHhhccCCceEEEEEeCHHHHHHHHHHHhCcccccEEEEECccccCchhcc---
Confidence 56776666666899999999999999998876667999999999999999999999999999999998754321110
Q ss_pred cccccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhh
Q 013862 82 MPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKS 161 (435)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (435)
...................... ............... .... ...........+......
T Consensus 157 ---------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~------~~~~~~~~~~~~~~~~~~- 215 (303)
T 3pe6_A 157 ---------TTFKVLAAKVLNSVLPNLSSGP-IDSSVLSRNKTEVDI----YNSD------PLICRAGLKVCFGIQLLN- 215 (303)
T ss_dssp ---------HHHHHHHHHHHHTTCCSCCCCC-CCGGGTCSCHHHHHH----HHTC------TTSCCSCCCHHHHHHHHH-
T ss_pred ---------HHHHHHHHHHHHHhcccccCCc-cchhhhhcchhHHHH----hccC------ccccccchhhhhHHHHHH-
Confidence 0011111111111111000000 000000000000000 0000 000001111111111111
Q ss_pred hhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCC--CceEEEeCCCCccccccCchhHHHHHhhc-ccccc
Q 013862 162 ASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALP--NCQTRRFGGGGHFLFLEDGVDLVTTIKGA-GYYRR 236 (435)
Q Consensus 162 ~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~pe~~~~~I~~~-~Fl~~ 236 (435)
........+.++++|+++++|++|.+++.+ ..+.+.+.++ ++++++++++||+++.++|+++.+.+.+. .|+.+
T Consensus 216 ~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~~~~l~~ 292 (303)
T 3pe6_A 216 AVSRVERALPKLTVPFLLLQGSADRLCDSK-GAYLLMELAKSQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQ 292 (303)
T ss_dssp HHHHHHHHGGGCCSCEEEEEETTCSSBCHH-HHHHHHHHCCCSSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcCCCCEEEEeeCCCCCCChH-HHHHHHHhcccCCceEEEeCCCccceeccchHHHHHHHHHHHHHHhc
Confidence 112234667889999999999999999998 7999999988 78999999999999999998877776652 25543
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A | Back alignment and structure |
|---|
Probab=99.81 E-value=1.2e-18 Score=154.08 Aligned_cols=176 Identities=15% Similarity=0.204 Sum_probs=110.8
Q ss_pred CCChHHHHHHHHH---HHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccccccccccccccc
Q 013862 12 GHHFTGLLKLIER---TIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAEL 88 (435)
Q Consensus 12 ~~s~~~~a~dl~~---~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~ 88 (435)
.++++++++|+.+ ++++++. ++++|+||||||.+|+.+|.++| |+++|+++++...... ..
T Consensus 63 ~~~~~~~~~d~~~~~~~l~~~~~----~~~~lvG~SmGG~ia~~~a~~~p--v~~lvl~~~~~~~~~~----------~~ 126 (247)
T 1tqh_A 63 HTGPDDWWQDVMNGYEFLKNKGY----EKIAVAGLSLGGVFSLKLGYTVP--IEGIVTMCAPMYIKSE----------ET 126 (247)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHTC----CCEEEEEETHHHHHHHHHHTTSC--CSCEEEESCCSSCCCH----------HH
T ss_pred CCCHHHHHHHHHHHHHHHHHcCC----CeEEEEEeCHHHHHHHHHHHhCC--CCeEEEEcceeecCcc----------hh
Confidence 4788888887766 4555555 48999999999999999999999 9999988765321100 00
Q ss_pred ccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhh
Q 013862 89 MSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANA 168 (435)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (435)
............... ... ..+.......... . ......... .....+..+
T Consensus 127 ~~~~~~~~~~~~~~~--------------~~~-~~~~~~~~~~~~~----------~-~~~~~~~~~----~~~~~~~~~ 176 (247)
T 1tqh_A 127 MYEGVLEYAREYKKR--------------EGK-SEEQIEQEMEKFK----------Q-TPMKTLKAL----QELIADVRD 176 (247)
T ss_dssp HHHHHHHHHHHHHHH--------------HTC-CHHHHHHHHHHHT----------T-SCCTTHHHH----HHHHHHHHH
T ss_pred hhHHHHHHHHHhhcc--------------ccc-chHHHHhhhhccc----------C-CCHHHHHHH----HHHHHHHHh
Confidence 000000000000000 000 0111111111100 0 001111111 111123346
Q ss_pred hcccccceEEEEeeCCCCCCCChhHHHHHHhhCCC--ceEEEeCCCCccccccC-chhHHHHHhhcccccc
Q 013862 169 RLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPN--CQTRRFGGGGHFLFLED-GVDLVTTIKGAGYYRR 236 (435)
Q Consensus 169 ~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~-pe~~~~~I~~~~Fl~~ 236 (435)
.+.++++|+|+|+|++|.++|++ ..+.+.+.+++ +++++++++||+++.|+ |+++++.|.+ |+++
T Consensus 177 ~l~~i~~P~Lii~G~~D~~~p~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~i~~--Fl~~ 244 (247)
T 1tqh_A 177 HLDLIYAPTFVVQARHDEMINPD-SANIIYNEIESPVKQIKWYEQSGHVITLDQEKDQLHEDIYA--FLES 244 (247)
T ss_dssp TGGGCCSCEEEEEETTCSSSCTT-HHHHHHHHCCCSSEEEEEETTCCSSGGGSTTHHHHHHHHHH--HHHH
T ss_pred hcccCCCCEEEEecCCCCCCCcc-hHHHHHHhcCCCceEEEEeCCCceeeccCccHHHHHHHHHH--HHHh
Confidence 78899999999999999999999 78999999986 59999999999999985 7999999999 8864
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.8e-18 Score=160.42 Aligned_cols=210 Identities=15% Similarity=0.124 Sum_probs=131.4
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
||.|..+....++++++++|+.++++.+....+.++++|+||||||.+++.+|.++|++|+++|++++........
T Consensus 98 ~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~---- 173 (342)
T 3hju_A 98 HGQSEGERMVVSDFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPES---- 173 (342)
T ss_dssp STTSCSSTTCCSCTHHHHHHHHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCSCCTTT----
T ss_pred CcCCCCcCCCcCcHHHHHHHHHHHHHHHHHhCCCCcEEEEEeChHHHHHHHHHHhCccccceEEEECcccccchhh----
Confidence 5777766667789999999999999999887666799999999999999999999999999999999875432211
Q ss_pred cccccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhh
Q 013862 82 MPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKS 161 (435)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (435)
....................... ............... ..... ..........+......
T Consensus 174 --------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~------~~~~~~~~~~~~~~~~~- 233 (342)
T 3hju_A 174 --------ATTFKVLAAKVLNLVLPNLSLGP-IDSSVLSRNKTEVDI----YNSDP------LICRAGLKVCFGIQLLN- 233 (342)
T ss_dssp --------TSHHHHHHHHHHHHHCTTCBCCC-CCGGGSCSCHHHHHH----HHTCT------TCCCSCCBHHHHHHHHH-
T ss_pred --------hhHHHHHHHHHHHHhccccccCc-ccccccccchHHHHH----HhcCc------ccccccccHHHHHHHHH-
Confidence 01111111111111111100000 000000000000100 00000 00000111111111111
Q ss_pred hhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCC--CceEEEeCCCCccccccCchhHHHHHhhc-ccccc
Q 013862 162 ASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALP--NCQTRRFGGGGHFLFLEDGVDLVTTIKGA-GYYRR 236 (435)
Q Consensus 162 ~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~pe~~~~~I~~~-~Fl~~ 236 (435)
......+.+.++++|+|+++|++|.+++.+ ..+.+.+.++ ++++++++++||+++.++|+++.+.+.+. .|+.+
T Consensus 234 ~~~~~~~~~~~i~~Pvlii~G~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~~l~~ 310 (342)
T 3hju_A 234 AVSRVERALPKLTVPFLLLQGSADRLCDSK-GAYLLMELAKSQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQ 310 (342)
T ss_dssp HHHHHHHHGGGCCSCEEEEEETTCSSSCHH-HHHHHHHHCCCSSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCcCEEEEEeCCCcccChH-HHHHHHHHcCCCCceEEEECCCCchhhcCChHHHHHHHHHHHHHHhc
Confidence 112334677889999999999999999998 7999999988 78999999999999999998777775552 25543
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} | Back alignment and structure |
|---|
Probab=99.80 E-value=4.2e-19 Score=160.94 Aligned_cols=209 Identities=13% Similarity=0.096 Sum_probs=118.5
Q ss_pred CccccccCCC----CCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccc
Q 013862 2 YGACIFQLQI----GHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSL 77 (435)
Q Consensus 2 yG~s~~p~~~----~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~ 77 (435)
||.|..+... .|+.+++++|+.++++.++. ++++|+||||||.+|+.+|.++|++|+++|++++.+......
T Consensus 62 ~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~p~~~~~~ 137 (291)
T 3qyj_A 62 YGDSSRPASVPHHINYSKRVMAQDQVEVMSKLGY----EQFYVVGHDRGARVAHRLALDHPHRVKKLALLDIAPTHKMYR 137 (291)
T ss_dssp STTSCCCCCCGGGGGGSHHHHHHHHHHHHHHTTC----SSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCHHHHHH
T ss_pred CCCCCCCCCCccccccCHHHHHHHHHHHHHHcCC----CCEEEEEEChHHHHHHHHHHhCchhccEEEEECCCCcchhhh
Confidence 6778766543 48999999999999999987 589999999999999999999999999999998764211000
Q ss_pred ccc--cc-cc--cc-ccccchhHHHHHHHHHhhcCChhHHHHHhhh-----hccchhHHHHHhHHhHHhhhcchhHHhcc
Q 013862 78 LQT--IM-PI--PA-ELMSGQMTLTLSYLLSLLTGDPLKMAMDSIV-----KGLFLQSTIQERSQDFVAMSSYLPVLANI 146 (435)
Q Consensus 78 ~~~--~~-~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (435)
... .. .. +. ........ ..+.. ............ ......+....+...+.
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 199 (291)
T 3qyj_A 138 TTDQEFATAYYHWFFLIQPDNLP---ETLIG---ANPEYYLRKCLEKWGKDFSAFHPQALAEYIRCFS------------ 199 (291)
T ss_dssp TCCHHHHHHTTHHHHTTCSTTHH---HHHHH---TCHHHHHHHHHHHHCSCGGGSCHHHHHHHHHHHT------------
T ss_pred cchhhhhHHHHHHHHhccCCCch---HHHHc---CCHHHHHHHHHHhcCCCcccCCHHHHHHHHHHhc------------
Confidence 000 00 00 00 00000000 00000 000000000000 00001111111111100
Q ss_pred CCchhhhhHHhhhhh-----hhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCc
Q 013862 147 LPKETLLWKLELLKS-----ASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDG 221 (435)
Q Consensus 147 ~~~~~~~~~~~~~~~-----~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p 221 (435)
...........++. ......+.+.+++||+|+|+|++|.+.+.......+.+..++.+..+++ |||+++.|+|
T Consensus 200 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~-~GH~~~~E~P 277 (291)
T 3qyj_A 200 -QPAVIHATCEDYRAAATIDLEHDELDMKQKISCPVLVLWGEKGIIGRKYDVLATWRERAIDVSGQSLP-CGHFLPEEAP 277 (291)
T ss_dssp -SHHHHHHHHHHHHHHTTHHHHHHHTTTTCCBCSCEEEEEETTSSHHHHSCHHHHHHTTBSSEEEEEES-SSSCHHHHSH
T ss_pred -CCCcchhHHHHHHcccccchhhcchhcCCccccceEEEecccccccchhhHHHHHHhhcCCcceeecc-CCCCchhhCH
Confidence 00000001111111 0111223567899999999999997543211355666777888888887 8999999999
Q ss_pred hhHHHHHhhcccccc
Q 013862 222 VDLVTTIKGAGYYRR 236 (435)
Q Consensus 222 e~~~~~I~~~~Fl~~ 236 (435)
+++++.|.+ |+..
T Consensus 278 ~~v~~~i~~--fL~~ 290 (291)
T 3qyj_A 278 EETYQAIYN--FLTH 290 (291)
T ss_dssp HHHHHHHHH--HHHC
T ss_pred HHHHHHHHH--HHhc
Confidence 999999999 8753
|
| >2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.80 E-value=3.8e-19 Score=166.53 Aligned_cols=203 Identities=15% Similarity=0.183 Sum_probs=120.9
Q ss_pred CCChHHHHHHHHHHHHHhhhcCCCCCE-EEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccccccccccc--ccc-
Q 013862 12 GHHFTGLLKLIERTIRSENCRSSNRPV-YLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPI--PAE- 87 (435)
Q Consensus 12 ~~s~~~~a~dl~~~l~~l~~~~~~~~~-~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~--~~~- 87 (435)
.++++++++|+.+++++++. +++ +|+||||||.+|+.+|.++|++|+++|++++............... .+.
T Consensus 124 ~~~~~~~~~dl~~~l~~l~~----~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 199 (366)
T 2pl5_A 124 FVSIQDMVKAQKLLVESLGI----EKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMASTAEHSAMQIAFNEVGRQAILS 199 (366)
T ss_dssp CCCHHHHHHHHHHHHHHTTC----SSEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSBCCHHHHHHHHHHHHHHHT
T ss_pred cccHHHHHHHHHHHHHHcCC----ceEEEEEEeCccHHHHHHHHHhCcHhhhheeEeccCccCCCccchhhHHHHHHHHh
Confidence 47999999999999999977 488 8999999999999999999999999999998864321110000000 000
Q ss_pred -----------cccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHh----------hhcchhH----
Q 013862 88 -----------LMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVA----------MSSYLPV---- 142 (435)
Q Consensus 88 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~---- 142 (435)
....... .......... ................ ...+...
T Consensus 200 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (366)
T 2pl5_A 200 DPNWKNGLYDENSPRKGL-ALARMVGHIT--------------YLSDDKMREKFGRNPPRGNILSTDFAVGSYLIYQGES 264 (366)
T ss_dssp STTCGGGTCSSSCCHHHH-HHHHHHHHHT--------------TBCHHHHHHHHTTSCCSSCTTTTTTTSCGGGGSTTCC
T ss_pred Ccccccccccccccccch-HHHHHhhccc--------------cCCHHHHHHHhhhhhhcccccchhhhHHHHHHHHHHh
Confidence 0000000 0000000000 0000000000000000 0000000
Q ss_pred HhccCCchhhhhHHhhhhhhh----hhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCC----CceEEEe-CCCC
Q 013862 143 LANILPKETLLWKLELLKSAS----AYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALP----NCQTRRF-GGGG 213 (435)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~----~~~~~~i-~~~g 213 (435)
+........+......+.... ......+.++++|+|+|+|++|.+++++ ..+.+.+.++ +++++++ +++|
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g 343 (366)
T 2pl5_A 265 FVDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPA-QSREIVKSLEAADKRVFYVELQSGEG 343 (366)
T ss_dssp SSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHH-HHHHHHHHHHHTTCCEEEEEECCCBS
T ss_pred hhcccChhHHHHHHhhhhhhccccccchhhhhccCCCCEEEEecCCCcccCHH-HHHHHHHHhhhcccCeEEEEeCCCCC
Confidence 000011111111111111100 0123467889999999999999999998 7899999988 8999999 8999
Q ss_pred ccccccCchhHHHHHhhcccccc
Q 013862 214 HFLFLEDGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 214 H~~~~e~pe~~~~~I~~~~Fl~~ 236 (435)
|+++.|+|+++++.|.+ |+++
T Consensus 344 H~~~~e~p~~~~~~i~~--fl~~ 364 (366)
T 2pl5_A 344 HDSFLLKNPKQIEILKG--FLEN 364 (366)
T ss_dssp SGGGGSCCHHHHHHHHH--HHHC
T ss_pred cchhhcChhHHHHHHHH--HHcc
Confidence 99999999999999999 8764
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.80 E-value=4.4e-19 Score=162.00 Aligned_cols=199 Identities=12% Similarity=0.125 Sum_probs=120.7
Q ss_pred ccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccccccccc
Q 013862 3 GACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIM 82 (435)
Q Consensus 3 G~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~ 82 (435)
|.|.. +...++++++++|+.+++++++. ++++|+||||||.+|+.+|.++|++|+++|++++.............
T Consensus 106 G~s~~-~~~~~~~~~~~~~l~~~l~~l~~----~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 180 (306)
T 2r11_A 106 NKSIP-ENVSGTRTDYANWLLDVFDNLGI----EKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETFLPFHHDFYK 180 (306)
T ss_dssp SSCEE-CSCCCCHHHHHHHHHHHHHHTTC----SSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSSBTSCCCHHHHH
T ss_pred CCCCC-CCCCCCHHHHHHHHHHHHHhcCC----CceeEEEECHHHHHHHHHHHhCccceeeEEEEcCccccCcccHHHHH
Confidence 44443 34568999999999999999987 58999999999999999999999999999999988643211100000
Q ss_pred ccccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhh
Q 013862 83 PIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSA 162 (435)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (435)
.. ........ ........... ........... ..... ......... .... ....
T Consensus 181 ~~-~~~~~~~~---~~~~~~~~~~~-----------~~~~~~~~~~~-~~~~~------~~~~~~~~~--~~~~--~~~~ 234 (306)
T 2r11_A 181 YA-LGLTASNG---VETFLNWMMND-----------QNVLHPIFVKQ-FKAGV------MWQDGSRNP--NPNA--DGFP 234 (306)
T ss_dssp HH-HTTTSTTH---HHHHHHHHTTT-----------CCCSCHHHHHH-HHHHH------HCCSSSCCC--CCCT--TSSS
T ss_pred HH-hHHHHHHH---HHHHHHHhhCC-----------ccccccccccc-cHHHH------HHHHhhhhh--hhhc--cCCC
Confidence 00 00000000 00000100000 00000000000 00000 000000000 0000 0000
Q ss_pred hhhhhhhcccccceEEEEeeCCCCCCCChhHHH-HHHhhCCCceEEEeCCCCccccccCchhHHHHHhhccccc
Q 013862 163 SAYANARLDAVKAQTLILCSGRDQLLPSEEEGD-RLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYR 235 (435)
Q Consensus 163 ~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~-~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~ 235 (435)
.......+.++++|+|+++|++|.+++.+ ..+ .+.+..+++++++++++||+++.|+|+++++.|.+ |++
T Consensus 235 ~~~~~~~l~~i~~P~lii~G~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~--fl~ 305 (306)
T 2r11_A 235 YVFTDEELRSARVPILLLLGEHEVIYDPH-SALHRASSFVPDIEAEVIKNAGHVLSMEQPTYVNERVMR--FFN 305 (306)
T ss_dssp CBCCHHHHHTCCSCEEEEEETTCCSSCHH-HHHHHHHHHSTTCEEEEETTCCTTHHHHSHHHHHHHHHH--HHC
T ss_pred CCCCHHHHhcCCCCEEEEEeCCCcccCHH-HHHHHHHHHCCCCEEEEeCCCCCCCcccCHHHHHHHHHH--HHh
Confidence 00123457788999999999999999988 465 45557899999999999999999999999999999 775
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 | Back alignment and structure |
|---|
Probab=99.80 E-value=1.7e-18 Score=158.51 Aligned_cols=66 Identities=24% Similarity=0.195 Sum_probs=58.4
Q ss_pred CccccccCC-CCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCc
Q 013862 2 YGACIFQLQ-IGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPAT 71 (435)
Q Consensus 2 yG~s~~p~~-~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~ 71 (435)
||.|..+.. ..++++++++|+.+++++++. ++++|+||||||.+|+.+|.++|++|+++|++++..
T Consensus 71 ~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~~----~~~~lvGhSmGg~ia~~~a~~~p~~v~~lvl~~~~~ 137 (313)
T 1azw_A 71 SGRSTPHADLVDNTTWDLVADIERLRTHLGV----DRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFL 137 (313)
T ss_dssp STTSBSTTCCTTCCHHHHHHHHHHHHHHTTC----SSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred CcCCCCCcccccccHHHHHHHHHHHHHHhCC----CceEEEEECHHHHHHHHHHHhChhheeEEEEecccc
Confidence 688865432 468999999999999999988 489999999999999999999999999999998764
|
| >2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.4e-18 Score=167.19 Aligned_cols=67 Identities=21% Similarity=0.439 Sum_probs=62.3
Q ss_pred hhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeC-CCCccccccCchhHHHHHhhcccccc
Q 013862 167 NARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFG-GGGHFLFLEDGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 167 ~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~-~~gH~~~~e~pe~~~~~I~~~~Fl~~ 236 (435)
.+.+.++++|+|+|+|++|.+++.+ ..+.+.+.++++++++++ ++||++++|+|+++++.|.+ |+++
T Consensus 374 ~~~l~~i~~PvLvi~G~~D~~~p~~-~~~~l~~~~p~~~~~~i~~~~GH~~~~e~p~~~~~~i~~--fL~~ 441 (444)
T 2vat_A 374 PEALAMITQPALIICARSDGLYSFD-EHVEMGRSIPNSRLCVVDTNEGHDFFVMEADKVNDAVRG--FLDQ 441 (444)
T ss_dssp HHHHTTCCSCEEEEECTTCSSSCHH-HHHHHHHHSTTEEEEECCCSCGGGHHHHTHHHHHHHHHH--HHTC
T ss_pred HHHhhcCCCCEEEEEeCCCCCCCHH-HHHHHHHHCCCcEEEEeCCCCCcchHHhCHHHHHHHHHH--HHHH
Confidence 4567889999999999999999998 799999999999999999 89999999999999999999 8864
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.2e-18 Score=165.16 Aligned_cols=228 Identities=14% Similarity=0.114 Sum_probs=127.4
Q ss_pred CccccccC----CCCCChHHHHHHHHHHHHHhhhc--CCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccc
Q 013862 2 YGACIFQL----QIGHHFTGLLKLIERTIRSENCR--SSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRK 75 (435)
Q Consensus 2 yG~s~~p~----~~~~s~~~~a~dl~~~l~~l~~~--~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~ 75 (435)
+|.|..++ ...++++++++|+.++++++... ..+++++|+||||||.+++.+|.++|++|+++|++++......
T Consensus 97 ~G~S~~~~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~ 176 (398)
T 2y6u_A 97 HGDSAVRNRGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLILIEPVVITRK 176 (398)
T ss_dssp SHHHHHHTTTTBCSCCCHHHHHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCCC
T ss_pred CCCCCCCCccccCCCCCcchHHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhCchheeEEEEecccccccc
Confidence 45665543 34689999999999999986410 1112499999999999999999999999999999998865321
Q ss_pred ccc---ccccccccccccchhHHHHHHHHHhhc---CChhHHHHHhhhh----ccchhHHHHHhHHhHHhhh----cchh
Q 013862 76 SLL---QTIMPIPAELMSGQMTLTLSYLLSLLT---GDPLKMAMDSIVK----GLFLQSTIQERSQDFVAMS----SYLP 141 (435)
Q Consensus 76 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~----~~~~ 141 (435)
... ...... ....... ....+..... ....... ..... ..........+........ ....
T Consensus 177 ~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (398)
T 2y6u_A 177 AIGAGRPGLPPD-SPQIPEN---LYNSLRLKTCDHFANESEYV-KYMRNGSFFTNAHSQILQNIIDFERTKASGDDEDGG 251 (398)
T ss_dssp CCSCCCTTCCTT-CCCCCHH---HHHHHHHTCCCEESSHHHHH-HHHHHTSTTTTSCHHHHHHHHHHHEEC--------C
T ss_pred cccccccccccc-ccccchh---hHHHhhhhccccCCCHHHHH-HHhhcCcccccCCHHHHHHHHHhcCccccccccCCC
Confidence 000 000000 0001111 1111111000 0000000 00000 0001111111111000000 0000
Q ss_pred HHhccCCchhhhhHHhhhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCc
Q 013862 142 VLANILPKETLLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDG 221 (435)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p 221 (435)
.+...............+..........+..+++|+|+|+|++|.+++++ ..+.+.+.++++++++++++||+++.|+|
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~~~~~-~~~~l~~~~~~~~~~~~~~~gH~~~~e~p 330 (398)
T 2y6u_A 252 PVRTKMEQAQNLLCYMNMQTFAPFLISNVKFVRKRTIHIVGARSNWCPPQ-NQLFLQKTLQNYHLDVIPGGSHLVNVEAP 330 (398)
T ss_dssp CEEESSCHHHHHHTTSCGGGTHHHHHHHGGGCCSEEEEEEETTCCSSCHH-HHHHHHHHCSSEEEEEETTCCTTHHHHSH
T ss_pred ceEecCCchhhhhhhcccccchHHHHHhccccCCCEEEEEcCCCCCCCHH-HHHHHHHhCCCceEEEeCCCCccchhcCH
Confidence 00000000000000000000112234667889999999999999999998 78999999999999999999999999999
Q ss_pred hhHHHHHhhccccccc
Q 013862 222 VDLVTTIKGAGYYRRG 237 (435)
Q Consensus 222 e~~~~~I~~~~Fl~~~ 237 (435)
+++++.|.+ |+.+.
T Consensus 331 ~~~~~~i~~--fl~~~ 344 (398)
T 2y6u_A 331 DLVIERINH--HIHEF 344 (398)
T ss_dssp HHHHHHHHH--HHHHH
T ss_pred HHHHHHHHH--HHHHH
Confidence 999999999 77543
|
| >4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1e-19 Score=163.23 Aligned_cols=204 Identities=11% Similarity=0.095 Sum_probs=126.4
Q ss_pred Ccccccc--CCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccc
Q 013862 2 YGACIFQ--LQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQ 79 (435)
Q Consensus 2 yG~s~~p--~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~ 79 (435)
+|.|..+ +...++++++++|+.+++++++. ++++|+||||||.+|+.+|.++|+ +.++|+++++.........
T Consensus 62 ~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~lvG~S~Gg~~a~~~a~~~p~-~~~~vl~~~~~~~~~~~~~ 136 (279)
T 4g9e_A 62 HGKSTDAIDPDRSYSMEGYADAMTEVMQQLGI----ADAVVFGWSLGGHIGIEMIARYPE-MRGLMITGTPPVAREEVGQ 136 (279)
T ss_dssp STTSCCCSCHHHHSSHHHHHHHHHHHHHHHTC----CCCEEEEETHHHHHHHHHTTTCTT-CCEEEEESCCCCCGGGHHH
T ss_pred CCCCCCCCCcccCCCHHHHHHHHHHHHHHhCC----CceEEEEECchHHHHHHHHhhCCc-ceeEEEecCCCCCCCccch
Confidence 4666554 23457999999999999999977 489999999999999999999999 8889988877543322111
Q ss_pred ccccc---ccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHH
Q 013862 80 TIMPI---PAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKL 156 (435)
Q Consensus 80 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (435)
..... ......................... ........... .........
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~---------------~~~~~~~~~ 189 (279)
T 4g9e_A 137 GFKSGPDMALAGQEIFSERDVESYARSTCGEPF------------EASLLDIVART---------------DGRARRIMF 189 (279)
T ss_dssp HBCCSTTGGGGGCSCCCHHHHHHHHHHHHCSSC------------CHHHHHHHHHS---------------CHHHHHHHH
T ss_pred hhccchhhhhcCcccccHHHHHHHHHhhccCcc------------cHHHHHHHHhh---------------hccchHHHH
Confidence 11000 0000000011111111111111110 00000000000 000000000
Q ss_pred hhhh-hhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHH-hhCCCceEEEeCCCCccccccCchhHHHHHhhcccc
Q 013862 157 ELLK-SASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLC-RALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYY 234 (435)
Q Consensus 157 ~~~~-~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~-~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl 234 (435)
..+. .........+.++++|+|+++|++|.+++.+ ..+.+. +..+++++++++++||+++.|+|+++++.|.+ |+
T Consensus 190 ~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~--fl 266 (279)
T 4g9e_A 190 EKFGSGTGGNQRDIVAEAQLPIAVVNGRDEPFVELD-FVSKVKFGNLWEGKTHVIDNAGHAPFREAPAEFDAYLAR--FI 266 (279)
T ss_dssp HHHHHTCBCCHHHHHHHCCSCEEEEEETTCSSBCHH-HHTTCCCSSBGGGSCEEETTCCSCHHHHSHHHHHHHHHH--HH
T ss_pred HHhhccCCchHHHHHHhcCCCEEEEEcCCCcccchH-HHHHHhhccCCCCeEEEECCCCcchHHhCHHHHHHHHHH--HH
Confidence 0000 0111223456788999999999999999998 677777 77889999999999999999999999999999 99
Q ss_pred cccccc
Q 013862 235 RRGRIV 240 (435)
Q Consensus 235 ~~~~~~ 240 (435)
++....
T Consensus 267 ~~~~~~ 272 (279)
T 4g9e_A 267 RDCTQL 272 (279)
T ss_dssp HHHHSS
T ss_pred HHhhhh
Confidence 766543
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.1e-18 Score=153.15 Aligned_cols=187 Identities=16% Similarity=0.191 Sum_probs=119.7
Q ss_pred CccccccCCCCCChHHHHHHHHHHH------HHhhhcCCCCCEEEEEeChhHHHHHHHHHh-CCCceeEEEEecCCcccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTI------RSENCRSSNRPVYLVGESLGACLALAVAAR-NPDMDLVLILANPATSFR 74 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l------~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~-~p~~v~~lVli~~~~~~~ 74 (435)
+|.|. ....++++++++|+.+++ ++++ +++|+||||||.+|+.+|.+ +|+ |+++|++++.....
T Consensus 52 ~g~s~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~l~G~S~Gg~~a~~~a~~~~p~-v~~lvl~~~~~~~~ 122 (245)
T 3e0x_A 52 HGESK--GQCPSTVYGYIDNVANFITNSEVTKHQK------NITLIGYSMGGAIVLGVALKKLPN-VRKVVSLSGGARFD 122 (245)
T ss_dssp STTCC--SCCCSSHHHHHHHHHHHHHHCTTTTTCS------CEEEEEETHHHHHHHHHHTTTCTT-EEEEEEESCCSBCT
T ss_pred CCCCC--CCCCcCHHHHHHHHHHHHHhhhhHhhcC------ceEEEEeChhHHHHHHHHHHhCcc-ccEEEEecCCCccc
Confidence 45554 445689999999999999 6553 79999999999999999999 999 99999999886432
Q ss_pred ccccccccccccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhh
Q 013862 75 KSLLQTIMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLW 154 (435)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (435)
.... . ....+.... ....... .. ............... ........
T Consensus 123 ~~~~-------------~---~~~~~~~~~-~~~~~~~--~~-~~~~~~~~~~~~~~~--------------~~~~~~~~ 168 (245)
T 3e0x_A 123 KLDK-------------D---FMEKIYHNQ-LDNNYLL--EC-IGGIDNPLSEKYFET--------------LEKDPDIM 168 (245)
T ss_dssp TSCH-------------H---HHHHHHTTC-CCHHHHH--HH-HTCSCSHHHHHHHTT--------------SCSSHHHH
T ss_pred cccH-------------H---HHHHHHHHH-HHhhcCc--cc-ccccchHHHHHHHHH--------------HhcCcHHH
Confidence 1110 0 000000000 0000000 00 000000000000000 00000000
Q ss_pred HHhhhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhcccc
Q 013862 155 KLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYY 234 (435)
Q Consensus 155 ~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl 234 (435)
...............+.++++|+++++|++|.+++.+ ..+.+.+.++++++++++++||+++.|+|+++.+.|.+ |+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~--fl 245 (245)
T 3e0x_A 169 INDLIACKLIDLVDNLKNIDIPVKAIVAKDELLTLVE-YSEIIKKEVENSELKIFETGKHFLLVVNAKGVAEEIKN--FI 245 (245)
T ss_dssp HHHHHHHHHCBCGGGGGGCCSCEEEEEETTCSSSCHH-HHHHHHHHSSSEEEEEESSCGGGHHHHTHHHHHHHHHT--TC
T ss_pred HHHHHHhccccHHHHHHhCCCCEEEEEeCCCCCCCHH-HHHHHHHHcCCceEEEeCCCCcceEEecHHHHHHHHHh--hC
Confidence 0000111111224567888999999999999999998 79999999999999999999999999999999999998 64
|
| >2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.79 E-value=1.6e-18 Score=163.07 Aligned_cols=211 Identities=14% Similarity=0.091 Sum_probs=121.9
Q ss_pred CCChHHHHHHHHHHHHHhhhcCCCCCEE-EEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccc--c-----c--
Q 013862 12 GHHFTGLLKLIERTIRSENCRSSNRPVY-LVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQ--T-----I-- 81 (435)
Q Consensus 12 ~~s~~~~a~dl~~~l~~l~~~~~~~~~~-lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~--~-----~-- 81 (435)
.++++++++|+.+++++++. ++++ |+||||||.+|+.+|.++|++|+++|++++.......... . .
T Consensus 133 ~~~~~~~~~~l~~~l~~l~~----~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 208 (377)
T 2b61_A 133 NIVVQDIVKVQKALLEHLGI----SHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFSAEAIGFNHVMRQAVIN 208 (377)
T ss_dssp CCCHHHHHHHHHHHHHHTTC----CCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSSCCHHHHHHHHHHHHHHHT
T ss_pred cccHHHHHHHHHHHHHHcCC----cceeEEEEEChhHHHHHHHHHHCchhhheeEEeccCccccccchhHHHHHHHHHhc
Confidence 48999999999999999987 4787 9999999999999999999999999999987543211000 0 0
Q ss_pred cccccc-ccc--chhHHH--HHHHHHh-hcCChhHHHHHhhhhccch-------hHHHHHhHHhHHhhhcchhHHhccCC
Q 013862 82 MPIPAE-LMS--GQMTLT--LSYLLSL-LTGDPLKMAMDSIVKGLFL-------QSTIQERSQDFVAMSSYLPVLANILP 148 (435)
Q Consensus 82 ~~~~~~-~~~--~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (435)
...+.. ... ...... ....... ........ ...+...... ......+..... ..+.....
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 281 (377)
T 2b61_A 209 DPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQL-AKAFGRATKSDGSFWGDYFQVESYLSYQG------KKFLERFD 281 (377)
T ss_dssp STTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHH-HHHTTTCBCTTCCTTSCCBHHHHHHHHHH------HHHHTTCC
T ss_pred CccccccchhccCCCchhhhHHHHhhhhcccCHHHH-HHHhccccccccccccchHHHHHHHHhhh------hhhccccC
Confidence 000000 000 000000 0000000 00000000 0000000000 000111110000 00111111
Q ss_pred chhhhhHHhhhhhh-----hhhhhhhcccccceEEEEeeCCCCCCCC----hhHHHHHHhhCCCceEEEeC-CCCccccc
Q 013862 149 KETLLWKLELLKSA-----SAYANARLDAVKAQTLILCSGRDQLLPS----EEEGDRLCRALPNCQTRRFG-GGGHFLFL 218 (435)
Q Consensus 149 ~~~~~~~~~~~~~~-----~~~~~~~l~~i~~Pvlii~G~~D~~~~~----~~~~~~~~~~~~~~~~~~i~-~~gH~~~~ 218 (435)
...+......+... .......+.++++|+|+|+|++|.++++ + ..+.+.+.++++++++++ ++||+++.
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~-~~~~l~~~~~~~~~~~i~~~~gH~~~~ 360 (377)
T 2b61_A 282 ANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYK-SKQLLEQSGVDLHFYEFPSDYGHDAFL 360 (377)
T ss_dssp HHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHH-HHHHHHHTTCEEEEEEECCTTGGGHHH
T ss_pred hhHHHHHHHHHhccccccccchHHhhhhhcCCCEEEEecCCcccCCccchHH-HHHHHHhcCCCceEEEeCCCCCchhhh
Confidence 11111111111100 0112456788999999999999999998 7 688999999999999999 99999999
Q ss_pred cCchhHHHHHhhcccccc
Q 013862 219 EDGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 219 e~pe~~~~~I~~~~Fl~~ 236 (435)
|+|+++++.|.+ |+.+
T Consensus 361 e~p~~~~~~i~~--fl~~ 376 (377)
T 2b61_A 361 VDYDQFEKRIRD--GLAG 376 (377)
T ss_dssp HCHHHHHHHHHH--HHHT
T ss_pred cCHHHHHHHHHH--HHhc
Confidence 999999999999 8753
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=9.6e-19 Score=163.40 Aligned_cols=66 Identities=14% Similarity=0.115 Sum_probs=59.8
Q ss_pred hcccccceEEEEeeCCCCCCCC--hhHHHHHHhhCCCc-eEEEeCCCCccccccCchhHHHHHhhccccccc
Q 013862 169 RLDAVKAQTLILCSGRDQLLPS--EEEGDRLCRALPNC-QTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRRG 237 (435)
Q Consensus 169 ~l~~i~~Pvlii~G~~D~~~~~--~~~~~~~~~~~~~~-~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~~ 237 (435)
.+..+++|+|+|+|++|.++|. + ..+.+.+.+|++ ++++++++||+++.|+|+++++.|.+ |+.+.
T Consensus 286 ~l~~i~~PvLii~G~~D~~~p~~~~-~~~~l~~~~p~~~~~~~i~~aGH~~~~e~p~~~~~~i~~--fl~~~ 354 (356)
T 2e3j_A 286 QGKPLTPPALFIGGQYDVGTIWGAQ-AIERAHEVMPNYRGTHMIADVGHWIQQEAPEETNRLLLD--FLGGL 354 (356)
T ss_dssp TTSCCCSCEEEEEETTCHHHHHTHH-HHHTHHHHCTTEEEEEEESSCCSCHHHHSHHHHHHHHHH--HHHTS
T ss_pred cCCccCCCEEEEecCCCccccccHH-HHHHHHHhCcCcceEEEecCcCcccchhCHHHHHHHHHH--HHhhc
Confidence 3478999999999999999984 6 688999999999 99999999999999999999999999 88643
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P | Back alignment and structure |
|---|
Probab=99.78 E-value=1.7e-18 Score=158.98 Aligned_cols=219 Identities=12% Similarity=0.083 Sum_probs=114.4
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHh--CCCceeEEEEecCCccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAAR--NPDMDLVLILANPATSFRKSLLQ 79 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~--~p~~v~~lVli~~~~~~~~~~~~ 79 (435)
+|.|..++...|+++++++|+.++++++.... .++++|+||||||.+|+.+|.+ +|+ |+++|++++..........
T Consensus 77 hG~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~-~~~~~lvGhSmGG~ia~~~A~~~~~p~-v~~lvl~~~~~~~~~~~~~ 154 (316)
T 3c5v_A 77 HGETKVKNPEDLSAETMAKDVGNVVEAMYGDL-PPPIMLIGHSMGGAIAVHTASSNLVPS-LLGLCMIDVVEGTAMDALN 154 (316)
T ss_dssp STTCBCSCTTCCCHHHHHHHHHHHHHHHHTTC-CCCEEEEEETHHHHHHHHHHHTTCCTT-EEEEEEESCCHHHHHHHHH
T ss_pred CCCCCCCCccccCHHHHHHHHHHHHHHHhccC-CCCeEEEEECHHHHHHHHHHhhccCCC-cceEEEEcccccchhhhHH
Confidence 68887666667999999999999999994311 1489999999999999999996 576 9999999875321100000
Q ss_pred cccccccc---cccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhc--chhHHhccCCchhhhh
Q 013862 80 TIMPIPAE---LMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSS--YLPVLANILPKETLLW 154 (435)
Q Consensus 80 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 154 (435)
..... .. ............................. ....... ........ ..............
T Consensus 155 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-- 224 (316)
T 3c5v_A 155 SMQNF-LRGRPKTFKSLENAIEWSVKSGQIRNLESARVSM------VGQVKQC-EGITSPEGSKKDHPYTWRIELAKT-- 224 (316)
T ss_dssp HHHHH-HHHSCSCBSSHHHHHHHHHHTTSCCCHHHHHHHH------HHHEEEC-C------------CEEESCCGGGG--
T ss_pred HHHHH-HhhCccccccHHHHHHHhhhcccccchhhhhhhh------hHHhhhc-cccccccccccccceeeeecccch--
Confidence 00000 00 00000000111110000000000000000 0000000 00000000 00000000000000
Q ss_pred HHhhhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhcccc
Q 013862 155 KLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYY 234 (435)
Q Consensus 155 ~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl 234 (435)
..............+.++++|+|+|+|++|.+.+.. ......++++++++++|||++++|+|+++++.|.+ |+
T Consensus 225 -~~~~~~~~~~~~~~~~~i~~P~Lli~g~~D~~~~~~----~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~--fl 297 (316)
T 3c5v_A 225 -EKYWDGWFRGLSNLFLSCPIPKLLLLAGVDRLDKDL----TIGQMQGKFQMQVLPQCGHAVHEDAPDKVAEAVAT--FL 297 (316)
T ss_dssp -HHHHHHHHTTHHHHHHHSSSCEEEEESSCCCCCHHH----HHHHHTTCSEEEECCCCSSCHHHHSHHHHHHHHHH--HH
T ss_pred -hhhhhhhhhhhHHHhhcCCCCEEEEEecccccccHH----HHHhhCCceeEEEcCCCCCcccccCHHHHHHHHHH--HH
Confidence 000000000112345578999999999999864332 22334577899999999999999999999999999 98
Q ss_pred ccccc
Q 013862 235 RRGRI 239 (435)
Q Consensus 235 ~~~~~ 239 (435)
.+...
T Consensus 298 ~~~~~ 302 (316)
T 3c5v_A 298 IRHRF 302 (316)
T ss_dssp HHTTS
T ss_pred Hhccc
Confidence 75543
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=6.5e-19 Score=174.22 Aligned_cols=218 Identities=12% Similarity=0.125 Sum_probs=130.9
Q ss_pred CccccccCC-CCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccccccc
Q 013862 2 YGACIFQLQ-IGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQT 80 (435)
Q Consensus 2 yG~s~~p~~-~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~ 80 (435)
||.|..++. ..++++++++|+.+++++++. ++++|+||||||.+|+.+|.++|++|+++|+++++..........
T Consensus 296 ~G~S~~~~~~~~~~~~~~~~d~~~~~~~l~~----~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 371 (555)
T 3i28_A 296 YGESSAPPEIEEYCMEVLCKEMVTFLDKLGL----SQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSP 371 (555)
T ss_dssp STTSCCCSCGGGGSHHHHHHHHHHHHHHHTC----SCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCTTSCH
T ss_pred CCCCCCCCCcccccHHHHHHHHHHHHHHcCC----CcEEEEEecHHHHHHHHHHHhChHheeEEEEEccCCCCCCcccch
Confidence 577766654 478999999999999999977 589999999999999999999999999999999875332211100
Q ss_pred cccccccccc-----------c----hhHHHHHHHHHhhcCChhHHHH-----Hhh------------hhccchhHHHHH
Q 013862 81 IMPIPAELMS-----------G----QMTLTLSYLLSLLTGDPLKMAM-----DSI------------VKGLFLQSTIQE 128 (435)
Q Consensus 81 ~~~~~~~~~~-----------~----~~~~~~~~~~~~~~~~~~~~~~-----~~~------------~~~~~~~~~~~~ 128 (435)
.... ...+ . .........+............ ... ............
T Consensus 372 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (555)
T 3i28_A 372 LESI--KANPVFDYQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQF 449 (555)
T ss_dssp HHHH--HTCGGGHHHHHHHSTTHHHHHHHHCHHHHHHHHSCCTTSCCCCCSSHHHHTSSSTTSCSSCCCCTTCCHHHHHH
T ss_pred HHHH--hcCCccchhHHhhCCCchHHHHhhhHHHHHHHHhccccccccccccccccccccccCccccccccccCHHHHHH
Confidence 0000 0000 0 0000001111111000000000 000 000000001111
Q ss_pred hHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEE
Q 013862 129 RSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRR 208 (435)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~ 208 (435)
+..... .........+...............+.++++|+|+++|++|.+++.+ ..+.+.+.++++++++
T Consensus 450 ~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~~~-~~~~~~~~~~~~~~~~ 518 (555)
T 3i28_A 450 YVQQFK----------KSGFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQ-MSQHMEDWIPHLKRGH 518 (555)
T ss_dssp HHHHHT----------TTTTHHHHHTTSCHHHHHHHHHTTTTCCCCSCEEEEEETTCSSSCGG-GGTTGGGTCTTCEEEE
T ss_pred HHHHHh----------cccchhHHHHHHhccccchhhccccccccccCEEEEEeCCCCCcCHH-HHHHHHhhCCCceEEE
Confidence 111000 00000000111111111112334567789999999999999999998 7899999999999999
Q ss_pred eCCCCccccccCchhHHHHHhhcccccccc
Q 013862 209 FGGGGHFLFLEDGVDLVTTIKGAGYYRRGR 238 (435)
Q Consensus 209 i~~~gH~~~~e~pe~~~~~I~~~~Fl~~~~ 238 (435)
++++||+++.|+|+++++.|.+ |+++..
T Consensus 519 ~~~~gH~~~~e~p~~~~~~i~~--fl~~~~ 546 (555)
T 3i28_A 519 IEDCGHWTQMDKPTEVNQILIK--WLDSDA 546 (555)
T ss_dssp ETTCCSCHHHHSHHHHHHHHHH--HHHHHT
T ss_pred eCCCCCCcchhCHHHHHHHHHH--HHHhcc
Confidence 9999999999999999999999 887654
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A | Back alignment and structure |
|---|
Probab=99.78 E-value=1.7e-18 Score=166.69 Aligned_cols=208 Identities=12% Similarity=0.099 Sum_probs=127.5
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhC-CCceeEEEEecCCcccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARN-PDMDLVLILANPATSFRKSLLQT 80 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~-p~~v~~lVli~~~~~~~~~~~~~ 80 (435)
||.|..+. ..++++++++|+.+++++++. ++++|+||||||.+++.+|+++ |++|+++|++++...........
T Consensus 62 ~G~S~~~~-~~~s~~~~a~dl~~~l~~l~~----~~v~LvGhS~GG~ia~~~aa~~~p~~v~~lVli~~~~~~~~~~~~~ 136 (456)
T 3vdx_A 62 FGQSSQPT-TGYDYDTFAADLNTVLETLDL----QDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTDDN 136 (456)
T ss_dssp STTSCCCS-SCCSHHHHHHHHHHHHHHHTC----CSEEEEEEGGGGHHHHHHHHHHCSSSEEEEEEESCCCSCCBCCSSC
T ss_pred CCCCCCCC-CCCCHHHHHHHHHHHHHHhCC----CCeEEEEECHHHHHHHHHHHhcchhheeEEEEeCCccccccccccc
Confidence 56775443 578999999999999999977 5899999999999999999887 99999999999876432221111
Q ss_pred ccccccccccchhHHHHHHHHHhhcCChhHHHHH----hhh-----hccchhHHHHHhHHhHHhhhcchhHHhccCCchh
Q 013862 81 IMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMD----SIV-----KGLFLQSTIQERSQDFVAMSSYLPVLANILPKET 151 (435)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (435)
.. ...... ....+.............. ... ................. ......
T Consensus 137 ~~----~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~- 198 (456)
T 3vdx_A 137 PD----GAAPQE---FFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAA----------SGGFFA- 198 (456)
T ss_dssp CS----CSBCHH---HHHHHHHHHHHCHHHHHHHHHHHHTTTTTSBTTTBCHHHHHHHHHHHH----------TSCTTH-
T ss_pred cc----ccchHH---HHHHHHHhhhccchHHHHHHHHHHhcccccccccccHHHHHHHhhhcc----------ccchhh-
Confidence 00 000000 1111111000000000000 000 00001111111111100 000000
Q ss_pred hhhHHhhhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhc
Q 013862 152 LLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGA 231 (435)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~ 231 (435)
..........+..+.+.++++|+|+|+|++|.+++.+...+.+.+..+++++++++++||+++.|+|+++.+.|.+
T Consensus 199 ---~~~~~~~~~~d~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~l~~~~~~~~~~~i~gagH~~~~e~p~~v~~~I~~- 274 (456)
T 3vdx_A 199 ---AAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLWTHAEEVNTALLA- 274 (456)
T ss_dssp ---HHHGGGGTTCCCTTTSTTCCSCCEEEEETTCSSSCGGGTHHHHHHHCTTSEEEEETTCCSCTTTTTHHHHHHHHHH-
T ss_pred ---hhhhhhhhhhhHHHHhhhCCCCEEEEEeCCCCCcCHHHHHHHHHHHCCCceEEEeCCCCCcchhhCHHHHHHHHHH-
Confidence 0001111112234567889999999999999999987447788888999999999999999999999999999999
Q ss_pred cccccc
Q 013862 232 GYYRRG 237 (435)
Q Consensus 232 ~Fl~~~ 237 (435)
|+.+.
T Consensus 275 -FL~~~ 279 (456)
T 3vdx_A 275 -FLAKA 279 (456)
T ss_dssp -HHHHH
T ss_pred -HHHHh
Confidence 88654
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=1.1e-18 Score=154.52 Aligned_cols=181 Identities=15% Similarity=0.135 Sum_probs=118.3
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
+|.|..+ ...++++++++|+.++++.+......++++|+||||||.+|+.+|.++|++|+++|+++|..........
T Consensus 67 ~G~S~~~-~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-- 143 (251)
T 2wtm_A 67 HGKSDGK-FEDHTLFKWLTNILAVVDYAKKLDFVTDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAMIPEIART-- 143 (251)
T ss_dssp STTSSSC-GGGCCHHHHHHHHHHHHHHHTTCTTEEEEEEEEETHHHHHHHHHHHHTTTTEEEEEEESCCTTHHHHHHH--
T ss_pred CCCCCCc-cccCCHHHHHHHHHHHHHHHHcCcccceEEEEEECcchHHHHHHHHhCcccceEEEEECcHHHhHHHHhh--
Confidence 4555432 2357899999999999999864211248999999999999999999999999999999886421110000
Q ss_pred cccccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhh
Q 013862 82 MPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKS 161 (435)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (435)
...... .......+.. .. ..... . . ...+. ....
T Consensus 144 ---------------------~~~~~~------~~~~~~~~~~-~~----~~~~~-~--------~-~~~~~---~~~~- 177 (251)
T 2wtm_A 144 ---------------------GELLGL------KFDPENIPDE-LD----AWDGR-K--------L-KGNYV---RVAQ- 177 (251)
T ss_dssp ---------------------TEETTE------ECBTTBCCSE-EE----ETTTE-E--------E-ETHHH---HHHT-
T ss_pred ---------------------hhhccc------cCCchhcchH-Hh----hhhcc-c--------c-chHHH---HHHH-
Confidence 000000 0000000000 00 00000 0 0 00000 0000
Q ss_pred hhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhcccccc
Q 013862 162 ASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 162 ~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~ 236 (435)
..+..+.+.++++|+|+++|++|.++|.+ ..+.+.+.++++++++++++||++ .|+|+++++.|.+ |+.+
T Consensus 178 -~~~~~~~~~~i~~P~lii~G~~D~~v~~~-~~~~~~~~~~~~~~~~~~~~gH~~-~~~~~~~~~~i~~--fl~~ 247 (251)
T 2wtm_A 178 -TIRVEDFVDKYTKPVLIVHGDQDEAVPYE-ASVAFSKQYKNCKLVTIPGDTHCY-DHHLELVTEAVKE--FMLE 247 (251)
T ss_dssp -TCCHHHHHHHCCSCEEEEEETTCSSSCHH-HHHHHHHHSSSEEEEEETTCCTTC-TTTHHHHHHHHHH--HHHH
T ss_pred -ccCHHHHHHhcCCCEEEEEeCCCCCcChH-HHHHHHHhCCCcEEEEECCCCccc-chhHHHHHHHHHH--HHHH
Confidence 00112456678999999999999999998 789999999999999999999999 9999999999999 7753
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.77 E-value=8.2e-19 Score=158.82 Aligned_cols=208 Identities=11% Similarity=0.085 Sum_probs=120.8
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
||.|..+....++++++++|+.+++++++. ++++|+||||||.+|+.+|.++|++|+++|+++|........ ..
T Consensus 80 ~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~----~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~--~~ 153 (292)
T 3l80_A 80 SGYSPVSNQANVGLRDWVNAILMIFEHFKF----QSYLLCVHSIGGFAALQIMNQSSKACLGFIGLEPTTVMIYRA--GF 153 (292)
T ss_dssp STTSCCCCCTTCCHHHHHHHHHHHHHHSCC----SEEEEEEETTHHHHHHHHHHHCSSEEEEEEEESCCCHHHHHH--CT
T ss_pred CCCCCCCCcccccHHHHHHHHHHHHHHhCC----CCeEEEEEchhHHHHHHHHHhCchheeeEEEECCCCcchhhh--cc
Confidence 677775566679999999999999999987 489999999999999999999999999999999765321100 00
Q ss_pred cccccccccchhHHHHHHHHHhhcCChhHHH--HHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhh
Q 013862 82 MPIPAELMSGQMTLTLSYLLSLLTGDPLKMA--MDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELL 159 (435)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (435)
........ ....... ....... ......................... ........-.... ....+
T Consensus 154 ----~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~-~~~~~ 220 (292)
T 3l80_A 154 ----SSDLYPQL----ALRRQKL-KTAADRLNYLKDLSRSHFSSQQFKQLWRGYDYCQ---RQLNDVQSLPDFK-IRLAL 220 (292)
T ss_dssp ----TSSSSHHH----HHHHHTC-CSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH---HHHHTTTTSTTCC-SSCCC
T ss_pred ----ccccchhH----HHHHHHH-hccCchhhhHhhccccccCHHHHHHhHHHHHHHH---HHHHhhhhccccc-hhhhh
Confidence 00000000 0000000 0000000 0000000000000000000000000 0000000000000 00000
Q ss_pred hhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhccccccc
Q 013862 160 KSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRRG 237 (435)
Q Consensus 160 ~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~~ 237 (435)
...+..+.+.. ++|+|+|+|++|..++++ . .+.+.+++++ ++++++||+++.|+|+++++.|.+ |+++.
T Consensus 221 --~~~~~~~~l~~-~~P~lii~g~~D~~~~~~--~-~~~~~~~~~~-~~~~~~gH~~~~e~p~~~~~~i~~--fl~~~ 289 (292)
T 3l80_A 221 --GEEDFKTGISE-KIPSIVFSESFREKEYLE--S-EYLNKHTQTK-LILCGQHHYLHWSETNSILEKVEQ--LLSNH 289 (292)
T ss_dssp --CGGGGCCCCCT-TSCEEEEECGGGHHHHHT--S-TTCCCCTTCE-EEECCSSSCHHHHCHHHHHHHHHH--HHHTC
T ss_pred --cchhhhhccCC-CCCEEEEEccCccccchH--H-HHhccCCCce-eeeCCCCCcchhhCHHHHHHHHHH--HHHhc
Confidence 00111235666 999999999999988776 3 7778889999 999999999999999999999999 88743
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 | Back alignment and structure |
|---|
Probab=99.76 E-value=2.4e-18 Score=153.59 Aligned_cols=199 Identities=15% Similarity=0.135 Sum_probs=104.9
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHH---HHHhCCCceeEEEEecCCcccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALA---VAARNPDMDLVLILANPATSFRKSLL 78 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~---~a~~~p~~v~~lVli~~~~~~~~~~~ 78 (435)
+|.|..+ ..++++++++|+.+++++++.. +.+++|+||||||.+|+. +|.++|++|+++|++++.........
T Consensus 54 hG~S~~~--~~~~~~~~a~~l~~~l~~l~~~--~~p~~lvGhSmGG~va~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 129 (264)
T 1r3d_A 54 HGTNPER--HCDNFAEAVEMIEQTVQAHVTS--EVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEE 129 (264)
T ss_dssp CSSCC---------CHHHHHHHHHHHTTCCT--TSEEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHH
T ss_pred CCCCCCC--CccCHHHHHHHHHHHHHHhCcC--CCceEEEEECHhHHHHHHHHHHHhhCccccceEEEecCCCCCCChhh
Confidence 5666543 2478999999999999998763 113999999999999999 88899999999999987542211100
Q ss_pred ccccccccccccchhHHHHHHHHHhhcCChhHHHHHhh-hhc---cchhHHHHHhHHhHHhhhcchhHHhccCCchhhhh
Q 013862 79 QTIMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSI-VKG---LFLQSTIQERSQDFVAMSSYLPVLANILPKETLLW 154 (435)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (435)
. ... .. ....+...............+ ... ............... .........
T Consensus 130 -----~-~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~ 187 (264)
T 1r3d_A 130 -----K-AAR----WQ-HDQQWAQRFSQQPIEHVLSDWYQQAVFSSLNHEQRQTLIAQRS-----------ANLGSSVAH 187 (264)
T ss_dssp -----H-HHH----HH-HHHHHHHHHHHSCHHHHHHHHTTSGGGTTCCHHHHHHHHHHHT-----------TSCHHHHHH
T ss_pred -----h-hhh----hc-ccHHHHHHhccccHHHHHHHHhhhhhhhccCHHHHHHHHHHHh-----------hcchHHHHH
Confidence 0 000 00 000000000000000000000 000 000000000000000 000000000
Q ss_pred HHhhhh-hhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhccc
Q 013862 155 KLELLK-SASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGY 233 (435)
Q Consensus 155 ~~~~~~-~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~F 233 (435)
...... ....+..+.+.++++|+|+|+|++|..++ .+.+..+ .++++++++||++++|+|+++++.|.+ |
T Consensus 188 ~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~------~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~--f 258 (264)
T 1r3d_A 188 MLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKFQ------QLAESSG-LSYSQVAQAGHNVHHEQPQAFAKIVQA--M 258 (264)
T ss_dssp HHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHHH------HHHHHHC-SEEEEETTCCSCHHHHCHHHHHHHHHH--H
T ss_pred HHHhhhhccCccHHHHHHhcCCCEEEEEECCCchHH------HHHHHhC-CcEEEcCCCCCchhhcCHHHHHHHHHH--H
Confidence 000000 00112234667899999999999997432 2222222 689999999999999999999999999 8
Q ss_pred cc
Q 013862 234 YR 235 (435)
Q Consensus 234 l~ 235 (435)
+.
T Consensus 259 l~ 260 (264)
T 1r3d_A 259 IH 260 (264)
T ss_dssp HH
T ss_pred HH
Confidence 75
|
| >4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.6e-17 Score=156.27 Aligned_cols=67 Identities=15% Similarity=0.111 Sum_probs=61.2
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATS 72 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~ 72 (435)
||.|..+....++++++++++.++++.++. ++++++||||||.+++.+|.++|++|+++|++++...
T Consensus 139 ~G~S~~~~~~~~~~~~~a~~~~~l~~~lg~----~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 205 (388)
T 4i19_A 139 FGLSGPLKSAGWELGRIAMAWSKLMASLGY----ERYIAQGGDIGAFTSLLLGAIDPSHLAGIHVNLLQTN 205 (388)
T ss_dssp SGGGCCCSSCCCCHHHHHHHHHHHHHHTTC----SSEEEEESTHHHHHHHHHHHHCGGGEEEEEESSCCCC
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHcCC----CcEEEEeccHHHHHHHHHHHhChhhceEEEEecCCCC
Confidence 788887777689999999999999999987 4899999999999999999999999999999997653
|
| >1iuq_A Glycerol-3-phosphate acyltransferase; open twisted alpha/beta, four helix bundle; 1.55A {Cucurbita moschata} SCOP: c.112.1.1 PDB: 1k30_A | Back alignment and structure |
|---|
Probab=99.76 E-value=1.8e-18 Score=153.36 Aligned_cols=148 Identities=15% Similarity=0.097 Sum_probs=104.0
Q ss_pred HHHHhhccceecccCCCcEEec-------cCCCCCCCCEEEEecCCcccchhHhhhHHHhh---hcCceeeeeccccccc
Q 013862 263 WMVDLTSSVMLSTLPDGKIVRG-------LSGIPSEGPVLLVGNHMLLGLEALPMVPTFVI---ERNILVRAIAHPMVFF 332 (435)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~-------~~~~p~~~~~i~v~nH~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 332 (435)
+...+.++++... +.+|.| .|++|+++++|++|||+|. .|.+++...+.. ....++.++|+.++++
T Consensus 97 ~~~~~ir~li~~~---~s~V~G~e~~~~~~E~l~~~~~vIfisNHQS~-~D~~vi~~~l~~~~~~l~~~~~fVAk~eL~~ 172 (367)
T 1iuq_A 97 FGQNYIRPLIDFG---NSFVGNLSLFKDIEEKLQQGHNVVLISNHQTE-ADPAIISLLLEKTNPYIAENTIFVAGDRVLA 172 (367)
T ss_dssp HHHHHHGGGBCGG---GCEEECHHHHHHHHHHHHTTCEEEEEECCCCT-THHHHHHHHHTTTCHHHHHHCEEEECTHHHH
T ss_pred HHHHHHHHHHhhc---CCEeecchhhhhHHhhccCCCcEEEEECCccc-hhHHHHHHHHhhcccccccceEEEeehhhhc
Confidence 6677777776643 556888 7888888999999999997 577666655532 0112599999999998
Q ss_pred cccCCCCCCcchHHHHHHhCCccc----c------HH----------HHHHHhcC-CCeEEEecCcccccccc-CCccce
Q 013862 333 NAKDGGLPDLVTYDTFRIMGSVPV----S------AI----------NFYKLVSS-KAHVLLYPGGVREAFHR-KGEEYK 390 (435)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~g~~~~----~------r~----------~~~~~l~~-g~~~~ifPeG~~~~~~~-~~~~~~ 390 (435)
.|+ ..| +..+ +.++||.. + |+ ++.+.|++ |.+++|||||||+...+ +|+...
T Consensus 173 ~Pl--~~P---fs~g-~~l~cI~~kk~id~~p~l~r~~~r~n~ksl~~~~~~Lk~GG~sI~IFPEGTRsR~~~~~g~l~~ 246 (367)
T 1iuq_A 173 DPL--CKP---FSIG-RNLICVYSKKHMFDIPELTETKRKANTRSLKEMALLLRGGSQLIWIAPSGGRDRPDPSTGEWYP 246 (367)
T ss_dssp CTT--THH---HHHT-SEEEECCCGGGTTSSGGGHHHHHHHHHHHHHHHHHHHHHCCCEEEECTTCSCCCBCTTTCCBCC
T ss_pred Ccc--ccc---hhhh-hheeeEEecccCCCcchhhhhhhHHHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCCCCCcccc
Confidence 874 111 2211 22345543 4 43 67778888 66999999999993211 344322
Q ss_pred eecCCchhHH----HHHHHcCCC--EEEEEEecchhhhh
Q 013862 391 LFWPESSEFV----RVAAAFGGK--IVPFGVVGEDDLAQ 423 (435)
Q Consensus 391 ~~~~~~~g~~----~~a~~~~~~--ivPv~~~g~~~~~~ 423 (435)
-+||+|.+ ++|.++|+| ||||++. +++++.
T Consensus 247 --~~Fk~gs~~~~~~LA~ksg~P~hIvPvaI~-t~~imp 282 (367)
T 1iuq_A 247 --APFDASSVDNMRRLIQHSDVPGHLFPLALL-CHDIMP 282 (367)
T ss_dssp --CCCCHHHHHHHHHHHHTSSSCEEEEEEEEE-CGGGSC
T ss_pred --ccccchhhhHHHHHHHHcCCCceEEEEEEE-eccccC
Confidence 34999999 999999999 9999999 667664
|
| >1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.76 E-value=3.4e-18 Score=155.69 Aligned_cols=188 Identities=12% Similarity=0.027 Sum_probs=111.6
Q ss_pred CChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCC-ceeEEEEecCCccccccccccccccccc-ccc
Q 013862 13 HHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPD-MDLVLILANPATSFRKSLLQTIMPIPAE-LMS 90 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~-~v~~lVli~~~~~~~~~~~~~~~~~~~~-~~~ 90 (435)
++++++++++.++++.+ . ++++|+||||||.+|+.+|.++|+ +|+++|+++++......... . .. ...
T Consensus 85 ~~~~~~~~~l~~~~~~~-~----~~~~lvGhS~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~----~-~~~~~~ 154 (302)
T 1pja_A 85 EQVQGFREAVVPIMAKA-P----QGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGDTD----Y-LKWLFP 154 (302)
T ss_dssp HHHHHHHHHHHHHHHHC-T----TCEEEEEETHHHHHHHHHHHHCTTCCEEEEEEESCCTTCBCSCCH----H-HHHHCT
T ss_pred HHHHHHHHHHHHHhhcC-C----CcEEEEEECHHHHHHHHHHHhcCccccCEEEEECCCcccccccch----h-hhhHHH
Confidence 57888888888888876 3 589999999999999999999999 79999999987532111000 0 00 000
Q ss_pred chhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhc
Q 013862 91 GQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARL 170 (435)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 170 (435)
........ ........ .. ............. ............+...... ....+..+.+
T Consensus 155 ~~~~~~~~---~~~~~~~~-~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~l 214 (302)
T 1pja_A 155 TSMRSNLY---RICYSPWG-QE-FSICNYWHDPHHD----DLYLNASSFLALINGERDH-----------PNATVWRKNF 214 (302)
T ss_dssp TCCHHHHH---HHHTSTTG-GG-STGGGGBCCTTCH----HHHHHHCSSHHHHTTSSCC-----------TTHHHHHHHH
T ss_pred HHHHHHHh---hccchHHH-HH-hhhhhcccChhhh----hhhhccchHHHHhhcCCcc-----------ccchhHHHHH
Confidence 00000000 00000000 00 0000000000000 0000000011111000000 0011124567
Q ss_pred ccccceEEEEeeCCCCCCCChhHHHHHHhhCCC---------------------------ceEEEeCCCCccccccCchh
Q 013862 171 DAVKAQTLILCSGRDQLLPSEEEGDRLCRALPN---------------------------CQTRRFGGGGHFLFLEDGVD 223 (435)
Q Consensus 171 ~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~---------------------------~~~~~i~~~gH~~~~e~pe~ 223 (435)
.+++ |+++++|++|.+++++ ..+.+.+..++ +++++++++||+++.|+|++
T Consensus 215 ~~i~-P~lii~G~~D~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~gH~~~~e~p~~ 292 (302)
T 1pja_A 215 LRVG-HLVLIGGPDDGVITPW-QSSFFGFYDANETVLEMEEQLVYLRDSFGLKTLLARGAIVRCPMAGISHTAWHSNRTL 292 (302)
T ss_dssp TTCS-EEEEEECTTCSSSSSG-GGGGTCEECTTCCEECGGGSHHHHTTTTSHHHHHHTTCEEEEECSSCCTTTTTSCHHH
T ss_pred hccC-cEEEEEeCCCCccchh-HhhHhhhcCCcccccchhhhhhhhhhhhchhhHhhcCCeEEEEecCccccccccCHHH
Confidence 8899 9999999999999998 67777766666 89999999999999999999
Q ss_pred HHHHHhhcccc
Q 013862 224 LVTTIKGAGYY 234 (435)
Q Consensus 224 ~~~~I~~~~Fl 234 (435)
+++.|.+ |+
T Consensus 293 ~~~~i~~--fl 301 (302)
T 1pja_A 293 YETCIEP--WL 301 (302)
T ss_dssp HHHHTGG--GC
T ss_pred HHHHHHH--hc
Confidence 9999999 76
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A | Back alignment and structure |
|---|
Probab=99.60 E-value=8.3e-20 Score=165.94 Aligned_cols=216 Identities=13% Similarity=0.057 Sum_probs=121.8
Q ss_pred CccccccC----CCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccc
Q 013862 2 YGACIFQL----QIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSL 77 (435)
Q Consensus 2 yG~s~~p~----~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~ 77 (435)
||.|..+. ...++++++++|+.+++++++. ++++|+||||||.+|+.+|.++|++|+++|++++........
T Consensus 62 ~G~s~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~----~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 137 (304)
T 3b12_A 62 YGGSSKPVGAPDHANYSFRAMASDQRELMRTLGF----ERFHLVGHARGGRTGHRMALDHPDSVLSLAVLDIIPTYVMFE 137 (304)
Confidence 56666553 4578999999999999999977 489999999999999999999999999999999875432211
Q ss_pred ccccccc--ccccccchhH-HHHHHHHHhhcCChhHH-HHHh--hhhccchhHHHHHhHHhHHhhhcchhHHhccCCchh
Q 013862 78 LQTIMPI--PAELMSGQMT-LTLSYLLSLLTGDPLKM-AMDS--IVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKET 151 (435)
Q Consensus 78 ~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (435)
....... .......... ................. .... ........+....+..... ....
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~ 204 (304)
T 3b12_A 138 EVDRFVARAYWHWYFLQQPAPYPEKVIGADPDTFYEGCLFGWGATGADGFDPEQLEEYRKQWR-------------DPAA 204 (304)
Confidence 1000000 0000000000 00000000000000000 0000 0000000000000000000 0000
Q ss_pred hhhHHhhhhhh-----hhhhhhhcccccceEEEEeeCCCCCC-CChhHHHHHHhhCCCceEEEeCCCCccccccCchhHH
Q 013862 152 LLWKLELLKSA-----SAYANARLDAVKAQTLILCSGRDQLL-PSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLV 225 (435)
Q Consensus 152 ~~~~~~~~~~~-----~~~~~~~l~~i~~Pvlii~G~~D~~~-~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~ 225 (435)
.......+... .......+.++++|+|+|+|++|..+ +.. ..+.+.+..++++++++ ++||+++.|+|++++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~i-~~gH~~~~e~p~~~~ 282 (304)
T 3b12_A 205 IHGSCCDYRAGGTIDFELDHGDLGRQVQCPALVFSGSAGLMHSLFE-MQVVWAPRLANMRFASL-PGGHFFVDRFPDDTA 282 (304)
Confidence 00000001000 00111226789999999999999554 555 67778888899999999 999999999999999
Q ss_pred HHHhhcccccccc
Q 013862 226 TTIKGAGYYRRGR 238 (435)
Q Consensus 226 ~~I~~~~Fl~~~~ 238 (435)
+.|.+ |+++..
T Consensus 283 ~~i~~--fl~~~~ 293 (304)
T 3b12_A 283 RILRE--FLSDAR 293 (304)
Confidence 99999 887653
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=6.3e-18 Score=151.05 Aligned_cols=182 Identities=13% Similarity=0.109 Sum_probs=121.9
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
+|.|.. +...++++++++|+.++++.+....+.++++|+||||||.+|+.+|.++|++|+++|+++|............
T Consensus 86 ~G~s~~-~~~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~ 164 (270)
T 3pfb_A 86 HGDSDG-KFENMTVLNEIEDANAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAATLKGDALEGN 164 (270)
T ss_dssp STTSSS-CGGGCCHHHHHHHHHHHHHHHHTCTTEEEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCTHHHHHHHHTE
T ss_pred ccCCCC-CCCccCHHHHHHhHHHHHHHHHhCcCCCeEEEEEeCchhHHHHHHHHhCchhhcEEEEeccccccchhhhhhh
Confidence 455543 2345789999999999999985433335899999999999999999999999999999998864322111000
Q ss_pred cccccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhh
Q 013862 82 MPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKS 161 (435)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (435)
... ........ .... ......... .. ....
T Consensus 165 ~~~-~~~~~~~~------------~~~~-----~~~~~~~~~----~~--------------------------~~~~-- 194 (270)
T 3pfb_A 165 TQG-VTYNPDHI------------PDRL-----PFKDLTLGG----FY--------------------------LRIA-- 194 (270)
T ss_dssp ETT-EECCTTSC------------CSEE-----EETTEEEEH----HH--------------------------HHHH--
T ss_pred hhc-cccCcccc------------cccc-----cccccccch----hH--------------------------hhcc--
Confidence 000 00000000 0000 000000000 00 0000
Q ss_pred hhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhccccccc
Q 013862 162 ASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRRG 237 (435)
Q Consensus 162 ~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~~ 237 (435)
........+..+++|+++++|++|.+++.+ ..+.+.+.++++++++++++||+++.++|+++.+.|.+ |+++.
T Consensus 195 ~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~--fl~~~ 267 (270)
T 3pfb_A 195 QQLPIYEVSAQFTKPVCLIHGTDDTVVSPN-ASKKYDQIYQNSTLHLIEGADHCFSDSYQKNAVNLTTD--FLQNN 267 (270)
T ss_dssp HHCCHHHHHTTCCSCEEEEEETTCSSSCTH-HHHHHHHHCSSEEEEEETTCCTTCCTHHHHHHHHHHHH--HHC--
T ss_pred cccCHHHHHhhCCccEEEEEcCCCCCCCHH-HHHHHHHhCCCCeEEEcCCCCcccCccchHHHHHHHHH--HHhhc
Confidence 000123456788999999999999999999 78999999999999999999999999999999999999 88653
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A | Back alignment and structure |
|---|
Probab=99.74 E-value=3.3e-17 Score=144.29 Aligned_cols=172 Identities=16% Similarity=0.179 Sum_probs=117.4
Q ss_pred ChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccccchh
Q 013862 14 HFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQM 93 (435)
Q Consensus 14 s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (435)
+++++++|+.++++.+... .++++++||||||.+++.+|.++|++++++|+++|........ ....
T Consensus 73 ~~~~~~~d~~~~i~~l~~~--~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~p~~~~~~~~--------~~~~---- 138 (251)
T 3dkr_A 73 NPDIWWAESSAAVAHMTAK--YAKVFVFGLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHL--------VPGF---- 138 (251)
T ss_dssp CHHHHHHHHHHHHHHHHTT--CSEEEEEESHHHHHHHHHHHHHCSSCCEEEESSCCCCTTCBCH--------HHHH----
T ss_pred cHHHHHHHHHHHHHHHHHh--cCCeEEEEechHHHHHHHHHHhCccceeeEEEecchhhccchh--------hHHH----
Confidence 8999999999999999774 4589999999999999999999999999999998875422111 0000
Q ss_pred HHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhcccc
Q 013862 94 TLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARLDAV 173 (435)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 173 (435)
......+........ ............ ...+..........+.++
T Consensus 139 ~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~ 183 (251)
T 3dkr_A 139 LKYAEYMNRLAGKSD-------------ESTQILAYLPGQ----------------------LAAIDQFATTVAADLNLV 183 (251)
T ss_dssp HHHHHHHHHHHTCCC-------------CHHHHHHHHHHH----------------------HHHHHHHHHHHHHTGGGC
T ss_pred HHHHHHHHhhcccCc-------------chhhHHhhhHHH----------------------HHHHHHHHHHHhcccccc
Confidence 111111111110000 000000000000 000001111124567788
Q ss_pred cceEEEEeeCCCCCCCChhHHHHHHhhCCC-c--eEEEeCCCCccccccC-chhHHHHHhhccccccc
Q 013862 174 KAQTLILCSGRDQLLPSEEEGDRLCRALPN-C--QTRRFGGGGHFLFLED-GVDLVTTIKGAGYYRRG 237 (435)
Q Consensus 174 ~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~-~--~~~~i~~~gH~~~~e~-pe~~~~~I~~~~Fl~~~ 237 (435)
++|+++++|++|.+++.+ ..+.+.+.+++ . ++++++++||+.+.+. ++++.+.|.+ |+++.
T Consensus 184 ~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~--fl~~~ 248 (251)
T 3dkr_A 184 KQPTFIGQAGQDELVDGR-LAYQLRDALINAARVDFHWYDDAKHVITVNSAHHALEEDVIA--FMQQE 248 (251)
T ss_dssp CSCEEEEEETTCSSBCTT-HHHHHHHHCTTCSCEEEEEETTCCSCTTTSTTHHHHHHHHHH--HHHTT
T ss_pred CCCEEEEecCCCcccChH-HHHHHHHHhcCCCCceEEEeCCCCcccccccchhHHHHHHHH--HHHhh
Confidence 999999999999999998 78889988877 5 8999999999999985 9999999999 87643
|
| >3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=4.3e-17 Score=145.26 Aligned_cols=189 Identities=15% Similarity=0.155 Sum_probs=119.7
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCc----eeEEEEecCCccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDM----DLVLILANPATSFRKSL 77 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~----v~~lVli~~~~~~~~~~ 77 (435)
||.|..+ ...++++++++|+.+++++++. ++++|+||||||.+|+.+|.++|++ ++++|++++........
T Consensus 57 ~G~s~~~-~~~~~~~~~~~~~~~~l~~~~~----~~~~lvG~S~Gg~ia~~~a~~~~~~~~~~v~~lvl~~~~~~~~~~~ 131 (267)
T 3fla_A 57 RQDRRHE-PPVDSIGGLTNRLLEVLRPFGD----RPLALFGHSMGAIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRD 131 (267)
T ss_dssp SGGGTTS-CCCCSHHHHHHHHHHHTGGGTT----SCEEEEEETHHHHHHHHHHHHTTTTTCCCCSEEEEESCCCTTCCCC
T ss_pred CCCCCCC-CCCcCHHHHHHHHHHHHHhcCC----CceEEEEeChhHHHHHHHHHhhhhhccccccEEEECCCCccccccc
Confidence 4666543 3467999999999999999865 5899999999999999999999987 99999998775332221
Q ss_pred cccccccccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHh
Q 013862 78 LQTIMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLE 157 (435)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (435)
. . ..... .......+... ..... ... ............... .
T Consensus 132 ~-----~-~~~~~--~~~~~~~~~~~---~~~~~--~~~----~~~~~~~~~~~~~~~-------------------~-- 173 (267)
T 3fla_A 132 D-----D-VRGAS--DERLVAELRKL---GGSDA--AML----ADPELLAMVLPAIRS-------------------D-- 173 (267)
T ss_dssp S-----C-TTCCC--HHHHHHHHHHT---CHHHH--HHH----HSHHHHHHHHHHHHH-------------------H--
T ss_pred h-----h-hcccc--hHHHHHHHHHh---cCcch--hhc----cCHHHHHHHHHHHHH-------------------H--
Confidence 0 0 11111 11111111110 00000 000 000000000000000 0
Q ss_pred hhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCC-ceEEEeCCCCccccccCchhHHHHHhhcccccc
Q 013862 158 LLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPN-CQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 158 ~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~ 236 (435)
+.............+++|+++++|++|.+++.+ ..+.+.+..++ ++++++++ ||+.+.++|+++++.|.+ |+++
T Consensus 174 -~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~g-gH~~~~~~~~~~~~~i~~--fl~~ 248 (267)
T 3fla_A 174 -YRAVETYRHEPGRRVDCPVTVFTGDHDPRVSVG-EARAWEEHTTGPADLRVLPG-GHFFLVDQAAPMIATMTE--KLAG 248 (267)
T ss_dssp -HHHHHHCCCCTTCCBSSCEEEEEETTCTTCCHH-HHHGGGGGBSSCEEEEEESS-STTHHHHTHHHHHHHHHH--HTC-
T ss_pred -HHhhhcccccccCcCCCCEEEEecCCCCCCCHH-HHHHHHHhcCCCceEEEecC-CceeeccCHHHHHHHHHH--Hhcc
Confidence 000000011122678999999999999999998 78899999988 89999998 999999999999999999 8876
Q ss_pred cc
Q 013862 237 GR 238 (435)
Q Consensus 237 ~~ 238 (435)
..
T Consensus 249 ~~ 250 (267)
T 3fla_A 249 PA 250 (267)
T ss_dssp --
T ss_pred cc
Confidence 54
|
| >3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043} | Back alignment and structure |
|---|
Probab=99.72 E-value=6.5e-17 Score=136.77 Aligned_cols=131 Identities=19% Similarity=0.216 Sum_probs=106.2
Q ss_pred CCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccc
Q 013862 10 QIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELM 89 (435)
Q Consensus 10 ~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~ 89 (435)
...++++++++|+.+++++++ ++++|+||||||.+++.+|.++|++++++|++++...... . +
T Consensus 53 ~~~~~~~~~~~~~~~~~~~~~-----~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~--------~-~--- 115 (191)
T 3bdv_A 53 WYQADLDRWVLAIRRELSVCT-----QPVILIGHSFGALAACHVVQQGQEGIAGVMLVAPAEPMRF--------E-I--- 115 (191)
T ss_dssp CSSCCHHHHHHHHHHHHHTCS-----SCEEEEEETHHHHHHHHHHHTTCSSEEEEEEESCCCGGGG--------T-C---
T ss_pred CCCcCHHHHHHHHHHHHHhcC-----CCeEEEEEChHHHHHHHHHHhcCCCccEEEEECCCccccc--------c-C---
Confidence 346789999999999999764 4899999999999999999999999999999998743110 0 0
Q ss_pred cchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhh
Q 013862 90 SGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANAR 169 (435)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (435)
. .. ..
T Consensus 116 ~--------------------------------~~-------------------------------------------~~ 120 (191)
T 3bdv_A 116 D--------------------------------DR-------------------------------------------IQ 120 (191)
T ss_dssp T--------------------------------TT-------------------------------------------SC
T ss_pred c--------------------------------cc-------------------------------------------cc
Confidence 0 00 23
Q ss_pred cccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccc----cCchhHHHHHhhccccccc
Q 013862 170 LDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFL----EDGVDLVTTIKGAGYYRRG 237 (435)
Q Consensus 170 l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~----e~pe~~~~~I~~~~Fl~~~ 237 (435)
+.++++|+++++|++|.++|.+ ..+.+.+.. ++++++++++||+++. +.|+.+ +.|.+ |+++.
T Consensus 121 ~~~~~~P~lii~g~~D~~~~~~-~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~~-~~i~~--fl~~~ 187 (191)
T 3bdv_A 121 ASPLSVPTLTFASHNDPLMSFT-RAQYWAQAW-DSELVDVGEAGHINAEAGFGPWEYGL-KRLAE--FSEIL 187 (191)
T ss_dssp SSCCSSCEEEEECSSBTTBCHH-HHHHHHHHH-TCEEEECCSCTTSSGGGTCSSCHHHH-HHHHH--HHHTT
T ss_pred cccCCCCEEEEecCCCCcCCHH-HHHHHHHhc-CCcEEEeCCCCcccccccchhHHHHH-HHHHH--HHHHh
Confidence 4567899999999999999998 688888876 8999999999999998 556655 88888 87654
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=99.72 E-value=8.3e-17 Score=137.66 Aligned_cols=128 Identities=16% Similarity=0.363 Sum_probs=110.9
Q ss_pred CCC-ChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccc
Q 013862 11 IGH-HFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELM 89 (435)
Q Consensus 11 ~~~-s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~ 89 (435)
..+ +++++++++.++++.++. ++++++|||+||.+++.++.++|++++++|+++|... ...
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~----~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~--------------~~~ 139 (207)
T 3bdi_A 78 IDRGDLKHAAEFIRDYLKANGV----ARSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAPAWV--------------ESL 139 (207)
T ss_dssp CTTCCHHHHHHHHHHHHHHTTC----SSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSC--------------GGG
T ss_pred CCcchHHHHHHHHHHHHHHcCC----CceEEEEECccHHHHHHHHHhCchhheEEEEeCCccc--------------cch
Confidence 456 899999999999998866 5899999999999999999999999999999998731 000
Q ss_pred cchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhh
Q 013862 90 SGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANAR 169 (435)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (435)
...
T Consensus 140 -----------------------------------------------------------------------------~~~ 142 (207)
T 3bdi_A 140 -----------------------------------------------------------------------------KGD 142 (207)
T ss_dssp -----------------------------------------------------------------------------HHH
T ss_pred -----------------------------------------------------------------------------hHH
Confidence 022
Q ss_pred cccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhcccccc
Q 013862 170 LDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 170 l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~ 236 (435)
+.++++|+++++|++|..++.+ ..+.+.+.+++.++++++++||..+.++|+++.+.|.+ |+++
T Consensus 143 ~~~~~~p~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~i~~--fl~~ 206 (207)
T 3bdi_A 143 MKKIRQKTLLVWGSKDHVVPIA-LSKEYASIISGSRLEIVEGSGHPVYIEKPEEFVRITVD--FLRN 206 (207)
T ss_dssp HTTCCSCEEEEEETTCTTTTHH-HHHHHHHHSTTCEEEEETTCCSCHHHHSHHHHHHHHHH--HHHT
T ss_pred HhhccCCEEEEEECCCCccchH-HHHHHHHhcCCceEEEeCCCCCCccccCHHHHHHHHHH--HHhh
Confidence 3456799999999999999998 78999999999999999999999999999999999999 7753
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} | Back alignment and structure |
|---|
Probab=99.72 E-value=5.1e-17 Score=144.84 Aligned_cols=182 Identities=18% Similarity=0.147 Sum_probs=119.5
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHh---CC---CceeEEEEecCCccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAAR---NP---DMDLVLILANPATSFRK 75 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~---~p---~~v~~lVli~~~~~~~~ 75 (435)
+|.|..+. ..++++++++|+.+++++++. ++++|+||||||.+|+.+|.+ +| ++|+++|++++......
T Consensus 77 ~G~s~~~~-~~~~~~~~~~d~~~~~~~l~~----~~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~~v~~~il~~~~~~~~~ 151 (270)
T 3llc_A 77 HGASGGAF-RDGTISRWLEEALAVLDHFKP----EKAILVGSSMGGWIALRLIQELKARHDNPTQVSGMVLIAPAPDFTS 151 (270)
T ss_dssp STTCCSCG-GGCCHHHHHHHHHHHHHHHCC----SEEEEEEETHHHHHHHHHHHHHHTCSCCSCEEEEEEEESCCTTHHH
T ss_pred CCCCCCcc-ccccHHHHHHHHHHHHHHhcc----CCeEEEEeChHHHHHHHHHHHHHhccccccccceeEEecCcccchh
Confidence 35554332 458999999999999999975 589999999999999999999 99 99999999998864332
Q ss_pred cccccccccccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhH
Q 013862 76 SLLQTIMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWK 155 (435)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (435)
... ........ ...+....... ... ..........
T Consensus 152 ~~~-------~~~~~~~~---~~~~~~~~~~~-------------~~~----------------------~~~~~~~~~~ 186 (270)
T 3llc_A 152 DLI-------EPLLGDRE---RAELAENGYFE-------------EVS----------------------EYSPEPNIFT 186 (270)
T ss_dssp HTT-------GGGCCHHH---HHHHHHHSEEE-------------ECC----------------------TTCSSCEEEE
T ss_pred hhh-------hhhhhhhh---hhhhhccCccc-------------Chh----------------------hcccchhHHH
Confidence 110 01111100 00000000000 000 0000000000
Q ss_pred Hhhhhh-hhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCC--ceEEEeCCCCcccc-ccCchhHHHHHhhc
Q 013862 156 LELLKS-ASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPN--CQTRRFGGGGHFLF-LEDGVDLVTTIKGA 231 (435)
Q Consensus 156 ~~~~~~-~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~-~e~pe~~~~~I~~~ 231 (435)
...... ........+.++++|+++++|++|.+++.+ ..+.+.+.+++ +++++++++||+.. .+.++++.+.|.+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~v~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~- 264 (270)
T 3llc_A 187 RALMEDGRANRVMAGMIDTGCPVHILQGMADPDVPYQ-HALKLVEHLPADDVVLTLVRDGDHRLSRPQDIDRMRNAIRA- 264 (270)
T ss_dssp HHHHHHHHHTCCTTSCCCCCSCEEEEEETTCSSSCHH-HHHHHHHTSCSSSEEEEEETTCCSSCCSHHHHHHHHHHHHH-
T ss_pred HHHHhhhhhhhhhhhhhcCCCCEEEEecCCCCCCCHH-HHHHHHHhcCCCCeeEEEeCCCcccccccccHHHHHHHHHH-
Confidence 000000 001123566788999999999999999998 79999999988 89999999999655 4778999999999
Q ss_pred ccccc
Q 013862 232 GYYRR 236 (435)
Q Consensus 232 ~Fl~~ 236 (435)
|+++
T Consensus 265 -fl~~ 268 (270)
T 3llc_A 265 -MIEP 268 (270)
T ss_dssp -HHC-
T ss_pred -HhcC
Confidence 7764
|
| >1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=7.1e-17 Score=151.42 Aligned_cols=64 Identities=20% Similarity=0.265 Sum_probs=59.1
Q ss_pred hcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCce-EEEeCCCCccccc---cCchhHHHHHhhccccc
Q 013862 169 RLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQ-TRRFGGGGHFLFL---EDGVDLVTTIKGAGYYR 235 (435)
Q Consensus 169 ~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~-~~~i~~~gH~~~~---e~pe~~~~~I~~~~Fl~ 235 (435)
.+.++++|+|+++|++|.++|++ ..+.+.+.+++++ +++++++||++++ |+|+++.+.|.+ |++
T Consensus 308 ~l~~i~~P~lii~G~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~--fl~ 375 (377)
T 1k8q_A 308 NLTDMHVPIAVWNGGNDLLADPH-DVDLLLSKLPNLIYHRKIPPYNHLDFIWAMDAPQAVYNEIVS--MMG 375 (377)
T ss_dssp CGGGCCSCEEEEEETTCSSSCHH-HHHHHHTTCTTEEEEEEETTCCTTHHHHCTTHHHHTHHHHHH--HHH
T ss_pred CHhhCCCCEEEEEeCCCcccCHH-HHHHHHHhCcCcccEEecCCCCceEEEecCCcHHHHHHHHHH--Hhc
Confidence 47889999999999999999998 7999999999987 9999999999996 899999999999 775
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.71 E-value=1e-16 Score=145.88 Aligned_cols=204 Identities=17% Similarity=0.116 Sum_probs=117.2
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
||.|..+ ...++++++++|+.++++.+.. .+.++++|+||||||.+|+.+|.+ | +|+++|++++.......
T Consensus 74 ~G~S~~~-~~~~~~~~~~~D~~~~~~~l~~-~~~~~~~lvGhSmGG~iA~~~A~~-~-~v~~lvl~~~~~~~~~~----- 144 (305)
T 1tht_A 74 VGLSSGS-IDEFTMTTGKNSLCTVYHWLQT-KGTQNIGLIAASLSARVAYEVISD-L-ELSFLITAVGVVNLRDT----- 144 (305)
T ss_dssp C---------CCCHHHHHHHHHHHHHHHHH-TTCCCEEEEEETHHHHHHHHHTTT-S-CCSEEEEESCCSCHHHH-----
T ss_pred CCCCCCc-ccceehHHHHHHHHHHHHHHHh-CCCCceEEEEECHHHHHHHHHhCc-c-CcCEEEEecCchhHHHH-----
Confidence 3667543 3468999999999999998742 223689999999999999999998 7 89999998765321100
Q ss_pred cccccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccch--hH-HHHHhHHhHHhhhcchhHHhccCCchhhhhHHhh
Q 013862 82 MPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFL--QS-TIQERSQDFVAMSSYLPVLANILPKETLLWKLEL 158 (435)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (435)
...... ................. .. ....+.... ....
T Consensus 145 ---------------~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~----------- 185 (305)
T 1tht_A 145 ---------------LEKALG---FDYLSLPIDELPNDLDFEGHKLGSEVFVRDC----------FEHH----------- 185 (305)
T ss_dssp ---------------HHHHHS---SCGGGSCGGGCCSEEEETTEEEEHHHHHHHH----------HHTT-----------
T ss_pred ---------------HHHHhh---hhhhhcchhhCcccccccccccCHHHHHHHH----------Hhcc-----------
Confidence 000000 00000000000000000 00 000000000 0000
Q ss_pred hhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhC--CCceEEEeCCCCccccccCchhHHHHHh---hccc
Q 013862 159 LKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRAL--PNCQTRRFGGGGHFLFLEDGVDLVTTIK---GAGY 233 (435)
Q Consensus 159 ~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~pe~~~~~I~---~~~F 233 (435)
+. ........+.++++|+|+++|++|.++|++ ..+.+.+.+ +++++++++++||.++ |+|+.+.+.+. +|..
T Consensus 186 ~~-~~~~~~~~l~~i~~PvLii~G~~D~~vp~~-~~~~l~~~i~~~~~~l~~i~~agH~~~-e~p~~~~~fl~~~~~~~~ 262 (305)
T 1tht_A 186 WD-TLDSTLDKVANTSVPLIAFTANNDDWVKQE-EVYDMLAHIRTGHCKLYSLLGSSHDLG-ENLVVLRNFYQSVTKAAI 262 (305)
T ss_dssp CS-SHHHHHHHHTTCCSCEEEEEETTCTTSCHH-HHHHHHTTCTTCCEEEEEETTCCSCTT-SSHHHHHHHHHHHHHHHH
T ss_pred cc-chhhHHHHHhhcCCCEEEEEeCCCCccCHH-HHHHHHHhcCCCCcEEEEeCCCCCchh-hCchHHHHHHHHHHHHHH
Confidence 00 001123567789999999999999999998 688999877 4789999999999996 88976544333 3200
Q ss_pred cccccccccccccCCCChHHHHH
Q 013862 234 YRRGRIVDYVSDFIPPTTIEVNK 256 (435)
Q Consensus 234 l~~~~~~~~~~~~~~p~~~~~~~ 256 (435)
=-.....+.+.+++.|+.+++..
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~ 285 (305)
T 1tht_A 263 AMDGGSLEIDVDFIEPDFEQLTI 285 (305)
T ss_dssp HHHTTCCCCCCCCCCCCHHHHHH
T ss_pred HhCcccchhhhhhhccchHhhcc
Confidence 01112445677888888776653
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A | Back alignment and structure |
|---|
Probab=99.71 E-value=2e-17 Score=147.89 Aligned_cols=177 Identities=18% Similarity=0.204 Sum_probs=116.4
Q ss_pred CCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccccccccc-cccccccc
Q 013862 12 GHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIM-PIPAELMS 90 (435)
Q Consensus 12 ~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~-~~~~~~~~ 90 (435)
.++++++++|+.++++.+... .++++|+||||||.+|+.+|.++|+ |+++|++++............. .. .....
T Consensus 87 ~~~~~~~~~d~~~~i~~l~~~--~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~ 162 (270)
T 3rm3_A 87 RTTFHDWVASVEEGYGWLKQR--CQTIFVTGLSMGGTLTLYLAEHHPD-ICGIVPINAAVDIPAIAAGMTGGGE-LPRYL 162 (270)
T ss_dssp TCCHHHHHHHHHHHHHHHHTT--CSEEEEEEETHHHHHHHHHHHHCTT-CCEEEEESCCSCCHHHHHHSCC----CCSEE
T ss_pred cCCHHHHHHHHHHHHHHHHhh--CCcEEEEEEcHhHHHHHHHHHhCCC-ccEEEEEcceecccccccchhcchh-HHHHH
Confidence 578999999999999999842 2689999999999999999999999 9999999987643221110000 00 00000
Q ss_pred chhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhc
Q 013862 91 GQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARL 170 (435)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 170 (435)
... .... ...... . ............... .........+
T Consensus 163 ~~~-----------~~~~------------~~~~~~-~----------------~~~~~~~~~~~~~~~-~~~~~~~~~~ 201 (270)
T 3rm3_A 163 DSI-----------GSDL------------KNPDVK-E----------------LAYEKTPTASLLQLA-RLMAQTKAKL 201 (270)
T ss_dssp ECC-----------CCCC------------SCTTCC-C----------------CCCSEEEHHHHHHHH-HHHHHHHHTG
T ss_pred HHh-----------Cccc------------cccchH-h----------------hcccccChhHHHHHH-HHHHHHHhhh
Confidence 000 0000 000000 0 000000000000000 0111223567
Q ss_pred ccccceEEEEeeCCCCCCCChhHHHHHHhhCCCc--eEEEeCCCCccccccCc-hhHHHHHhhcccccc
Q 013862 171 DAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNC--QTRRFGGGGHFLFLEDG-VDLVTTIKGAGYYRR 236 (435)
Q Consensus 171 ~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~--~~~~i~~~gH~~~~e~p-e~~~~~I~~~~Fl~~ 236 (435)
.++++|+|+++|++|.+++.. ..+.+.+.+++. ++++++++||+++.+++ +++.+.|.+ |+++
T Consensus 202 ~~~~~P~lii~G~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~--fl~~ 267 (270)
T 3rm3_A 202 DRIVCPALIFVSDEDHVVPPG-NADIIFQGISSTEKEIVRLRNSYHVATLDYDQPMIIERSLE--FFAK 267 (270)
T ss_dssp GGCCSCEEEEEETTCSSSCTT-HHHHHHHHSCCSSEEEEEESSCCSCGGGSTTHHHHHHHHHH--HHHH
T ss_pred hhcCCCEEEEECCCCcccCHH-HHHHHHHhcCCCcceEEEeCCCCcccccCccHHHHHHHHHH--HHHh
Confidence 788999999999999999999 789999999876 99999999999999987 889999999 7754
|
| >3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=1e-16 Score=151.23 Aligned_cols=217 Identities=11% Similarity=0.069 Sum_probs=116.1
Q ss_pred CccccccC-CCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccccccc
Q 013862 2 YGACIFQL-QIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQT 80 (435)
Q Consensus 2 yG~s~~p~-~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~ 80 (435)
||.|..+. ...++++++++++.++++.++.. ++++++||||||.+++.+|.++|+.+..++.+++........
T Consensus 153 ~G~S~~~~~~~~~~~~~~a~~~~~l~~~lg~~---~~~~lvG~S~Gg~ia~~~A~~~p~~~~~~l~~~~~~~~~~~~--- 226 (408)
T 3g02_A 153 YTFSSGPPLDKDFGLMDNARVVDQLMKDLGFG---SGYIIQGGDIGSFVGRLLGVGFDACKAVHLNFCNMSAPPEGP--- 226 (408)
T ss_dssp STTSCCSCSSSCCCHHHHHHHHHHHHHHTTCT---TCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCCCCCTTCC---
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC---CCEEEeCCCchHHHHHHHHHhCCCceEEEEeCCCCCCCcccc---
Confidence 78888775 56899999999999999999872 289999999999999999999977555554444332211100
Q ss_pred ccccccccccchhHHHHHHHHHhh-cCChhHHHHH------hhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhh-
Q 013862 81 IMPIPAELMSGQMTLTLSYLLSLL-TGDPLKMAMD------SIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETL- 152 (435)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 152 (435)
. ...+............... .......... ...-...+........+.+....+. ....+.+
T Consensus 227 ---~-~~~l~~~e~~~~~~~~~~~~~~~~y~~~~~t~p~tl~~~l~dsP~gl~awi~ek~~~w~d~------~~~~d~ll 296 (408)
T 3g02_A 227 ---S-IESLSAAEKEGIARMEKFMTDGYAYAMEHSTRPSTIGHVLSSSPIALLAWIGEKYLQWVDK------PLPSETIL 296 (408)
T ss_dssp ---C-GGGSCHHHHHHHHHHHHHHHHSCHHHHHHHHCHHHHHHHHHSCHHHHHHHHHHHHHHSCSS------CCCHHHHH
T ss_pred ---c-ccCCCHHHHHHHHHHHHHHHhCcchhhhhcCcHHHHHHHHhcChHHHHhhhhhhhhhccCC------CCCHHHHH
Confidence 0 1111111111111111100 0000000000 0000000111111111111111100 0001100
Q ss_pred -----hhH-------Hhhhhhhhhh-hh-------hhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCC
Q 013862 153 -----LWK-------LELLKSASAY-AN-------ARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGG 212 (435)
Q Consensus 153 -----~~~-------~~~~~~~~~~-~~-------~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~ 212 (435)
.|. ...+...... .. ..+..+++|+++++|.+|...++. ...+. ..+..++.+++++
T Consensus 297 ~~v~~y~~t~~~~~s~~~y~e~~~~~~~~~~~~~~~~l~~i~vPt~v~~~~~D~~~~p~-~~~~~--~~~~~~~~~~~~g 373 (408)
T 3g02_A 297 EMVSLYWLTESFPRAIHTYREWVPTASAPNGATPYQKELYIHKPFGFSFFPKDLVPVPR-SWIAT--TGNLVFFRDHAEG 373 (408)
T ss_dssp HHHHHHHHTTHHHHHGGGHHHHTTC-------CTTTTTTCEEEEEEEEECTBSSSCCCH-HHHGG--GEEEEEEEECSSC
T ss_pred HHHHHHHhhccchhHHHHHHhhcccccccccccccccCCCcCCCEEEEeCCcccccCcH-HHHHh--cCCeeEEEECCCC
Confidence 000 0111100000 00 045678999999999999877776 22222 2334678999999
Q ss_pred CccccccCchhHHHHHhhccccccccc
Q 013862 213 GHFLFLEDGVDLVTTIKGAGYYRRGRI 239 (435)
Q Consensus 213 gH~~~~e~pe~~~~~I~~~~Fl~~~~~ 239 (435)
||++++|+|+.+++.|.+ |++....
T Consensus 374 GHf~~lE~Pe~~~~~l~~--fl~~~~~ 398 (408)
T 3g02_A 374 GHFAALERPRELKTDLTA--FVEQVWQ 398 (408)
T ss_dssp BSCHHHHCHHHHHHHHHH--HHHHHC-
T ss_pred cCchhhhCHHHHHHHHHH--HHHHHHH
Confidence 999999999999999999 8875543
|
| >1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31 | Back alignment and structure |
|---|
Probab=99.68 E-value=2.5e-16 Score=133.26 Aligned_cols=137 Identities=18% Similarity=0.219 Sum_probs=103.8
Q ss_pred CChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCC--ceeEEEEecCCcccccccccccccccccccc
Q 013862 13 HHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPD--MDLVLILANPATSFRKSLLQTIMPIPAELMS 90 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~--~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~ 90 (435)
.+++++++++.++++.+ . ++++|+||||||.+++.+|.++|+ +++++|++++...... . +..
T Consensus 47 ~~~~~~~~~~~~~~~~~-~----~~~~l~G~S~Gg~~a~~~a~~~~~~~~v~~~v~~~~~~~~~~--------~-~~~-- 110 (192)
T 1uxo_A 47 PRLEDWLDTLSLYQHTL-H----ENTYLVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLP--------T-LQM-- 110 (192)
T ss_dssp CCHHHHHHHHHTTGGGC-C----TTEEEEEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCT--------T-CGG--
T ss_pred CCHHHHHHHHHHHHHhc-c----CCEEEEEeCccHHHHHHHHHHhcccCCccEEEEeccCCCccc--------c-chh--
Confidence 47899999999999877 3 589999999999999999999999 9999999998743110 0 000
Q ss_pred chhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhc
Q 013862 91 GQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARL 170 (435)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 170 (435)
. ..+. . .+.+ ...+
T Consensus 111 -----------------------------------~----~~~~----------~-~~~~----------------~~~~ 124 (192)
T 1uxo_A 111 -----------------------------------L----DEFT----------Q-GSFD----------------HQKI 124 (192)
T ss_dssp -----------------------------------G----GGGT----------C-SCCC----------------HHHH
T ss_pred -----------------------------------h----hhhh----------h-cCCC----------------HHHH
Confidence 0 0000 0 0000 1234
Q ss_pred ccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhH---HHHHhhccccc
Q 013862 171 DAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDL---VTTIKGAGYYR 235 (435)
Q Consensus 171 ~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~---~~~I~~~~Fl~ 235 (435)
.++++|+++++|++|.+++.+ ..+.+.+.+ ++++++++++||+.+.++|+++ .+.|.+ |+.
T Consensus 125 ~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~~~~l~~--~l~ 188 (192)
T 1uxo_A 125 IESAKHRAVIASKDDQIVPFS-FSKDLAQQI-DAALYEVQHGGHFLEDEGFTSLPIVYDVLTS--YFS 188 (192)
T ss_dssp HHHEEEEEEEEETTCSSSCHH-HHHHHHHHT-TCEEEEETTCTTSCGGGTCSCCHHHHHHHHH--HHH
T ss_pred HhhcCCEEEEecCCCCcCCHH-HHHHHHHhc-CceEEEeCCCcCcccccccccHHHHHHHHHH--HHH
Confidence 567889999999999999998 689999988 9999999999999999998665 555555 554
|
| >2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.67 E-value=3.9e-16 Score=132.30 Aligned_cols=139 Identities=16% Similarity=0.134 Sum_probs=102.8
Q ss_pred hHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccccchhH
Q 013862 15 FTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMT 94 (435)
Q Consensus 15 ~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (435)
..++.+++..++++++. +++++|+||||||.+++.+|.++| |+++|++++..... ....
T Consensus 49 ~~~~~~~~~~~~~~l~~---~~~~~lvG~S~Gg~ia~~~a~~~p--v~~lvl~~~~~~~~---------------~~~~- 107 (194)
T 2qs9_A 49 TARESIWLPFMETELHC---DEKTIIIGHSSGAIAAMRYAETHR--VYAIVLVSAYTSDL---------------GDEN- 107 (194)
T ss_dssp TCCHHHHHHHHHHTSCC---CTTEEEEEETHHHHHHHHHHHHSC--CSEEEEESCCSSCT---------------TCHH-
T ss_pred cccHHHHHHHHHHHhCc---CCCEEEEEcCcHHHHHHHHHHhCC--CCEEEEEcCCcccc---------------chhh-
Confidence 34567788888888865 258999999999999999999999 99999999874210 0000
Q ss_pred HHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhccccc
Q 013862 95 LTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARLDAVK 174 (435)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 174 (435)
.. . ..+.. ... ..+.+..+.
T Consensus 108 ---~~-~-------------------------~~~~~-------------~~~------------------~~~~~~~~~ 127 (194)
T 2qs9_A 108 ---ER-A-------------------------SGYFT-------------RPW------------------QWEKIKANC 127 (194)
T ss_dssp ---HH-H-------------------------TSTTS-------------SCC------------------CHHHHHHHC
T ss_pred ---hH-H-------------------------Hhhhc-------------ccc------------------cHHHHHhhC
Confidence 00 0 00000 000 001233456
Q ss_pred ceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhccccccccc
Q 013862 175 AQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRRGRI 239 (435)
Q Consensus 175 ~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~~~~ 239 (435)
+|+++++|++|.++|.+ ..+.+.+.+ ++++++++++||+++.|+|+.+++.+ + |+.+...
T Consensus 128 ~p~lii~G~~D~~vp~~-~~~~~~~~~-~~~~~~~~~~gH~~~~~~p~~~~~~~-~--fl~~~~~ 187 (194)
T 2qs9_A 128 PYIVQFGSTDDPFLPWK-EQQEVADRL-ETKLHKFTDCGHFQNTEFHELITVVK-S--LLKVPAL 187 (194)
T ss_dssp SEEEEEEETTCSSSCHH-HHHHHHHHH-TCEEEEESSCTTSCSSCCHHHHHHHH-H--HHTCCCC
T ss_pred CCEEEEEeCCCCcCCHH-HHHHHHHhc-CCeEEEeCCCCCccchhCHHHHHHHH-H--HHHhhhh
Confidence 79999999999999998 688888888 89999999999999999999999887 6 8876543
|
| >3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=4.8e-16 Score=139.88 Aligned_cols=186 Identities=15% Similarity=0.107 Sum_probs=113.2
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCcee----EEEEecCCccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDL----VLILANPATSFRKSL 77 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~----~lVli~~~~~~~~~~ 77 (435)
+|.|..+ ...++++++++++.++++++.. .++++|+||||||.+|+.+|.++|+++. .++++++........
T Consensus 88 ~G~S~~~-~~~~~~~~~a~~~~~~l~~~~~---~~~~~lvG~S~Gg~va~~~a~~~p~~~~~~~~~l~l~~~~~p~~~~~ 163 (280)
T 3qmv_A 88 RGLRLRE-RPYDTMEPLAEAVADALEEHRL---THDYALFGHSMGALLAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGD 163 (280)
T ss_dssp SGGGTTS-CCCCSHHHHHHHHHHHHHHTTC---SSSEEEEEETHHHHHHHHHHHHHHHTTCCCCSCEEEESCCCGGGCSC
T ss_pred CCCCCCC-CCCCCHHHHHHHHHHHHHHhCC---CCCEEEEEeCHhHHHHHHHHHHHHHcCCCCceEEEEECCCCCCCcCc
Confidence 4666433 3568999999999999999832 2689999999999999999999998877 888777654322111
Q ss_pred cccccccccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHh
Q 013862 78 LQTIMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLE 157 (435)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (435)
. . ..... .......+.... ....... .......... ..+...
T Consensus 164 ~-----~-~~~~~--~~~~~~~~~~~~-~~~~~~~--------~~~~~~~~~~-------------------~~~~~~-- 205 (280)
T 3qmv_A 164 R-----A-DHTLS--DTALREVIRDLG-GLDDADT--------LGAAYFDRRL-------------------PVLRAD-- 205 (280)
T ss_dssp C-----C-GGGSC--HHHHHHHHHHHT-CCC-----------------CCTTH-------------------HHHHHH--
T ss_pred c-----c-ccccC--HHHHHHHHHHhC-CCChhhh--------cCHHHHHHHH-------------------HHHHHH--
Confidence 0 0 00010 011111111110 0000000 0000000000 000000
Q ss_pred hhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCc-eEEEeCCCCccccc--cCchhHHHHHhhcccc
Q 013862 158 LLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNC-QTRRFGGGGHFLFL--EDGVDLVTTIKGAGYY 234 (435)
Q Consensus 158 ~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~-~~~~i~~~gH~~~~--e~pe~~~~~I~~~~Fl 234 (435)
+..........+..+++|+++++|++|.+++.+ ..+.+.+..++. ++++++ +||+.++ ++|+++++.|.+ ||
T Consensus 206 -~~~~~~~~~~~~~~i~~P~l~i~G~~D~~~~~~-~~~~~~~~~~~~~~~~~~~-ggH~~~~~~~~~~~~~~~i~~--~L 280 (280)
T 3qmv_A 206 -LRACERYDWHPRPPLDCPTTAFSAAADPIATPE-MVEAWRPYTTGSFLRRHLP-GNHFFLNGGPSRDRLLAHLGT--EL 280 (280)
T ss_dssp -HHHHHTCCCCCCCCBCSCEEEEEEEECSSSCHH-HHHTTGGGBSSCEEEEEEE-EETTGGGSSHHHHHHHHHHHT--TC
T ss_pred -HHHHHhccccCCCceecCeEEEEecCCCCcChH-HHHHHHHhcCCceEEEEec-CCCeEEcCchhHHHHHHHHHh--hC
Confidence 000011112235688999999999999999988 688888888875 677777 5999999 899999999998 64
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 | Back alignment and structure |
|---|
Probab=99.66 E-value=1.4e-16 Score=136.71 Aligned_cols=135 Identities=16% Similarity=0.220 Sum_probs=111.1
Q ss_pred CccccccCCCCCChHHHH--HHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLL--KLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQ 79 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a--~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~ 79 (435)
+|.|..+. ..+++++++ +++.+++++++. ++++++|||+||.+++.+|.++|++++++|++++....
T Consensus 72 ~g~s~~~~-~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~------ 140 (210)
T 1imj_A 72 LGHSKEAA-APAPIGELAPGSFLAAVVDALEL----GPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTD------ 140 (210)
T ss_dssp SGGGTTSC-CSSCTTSCCCTHHHHHHHHHHTC----CSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGG------
T ss_pred CCCCCCCC-CcchhhhcchHHHHHHHHHHhCC----CCeEEEEECchHHHHHHHHHhCccccceEEEeCCCccc------
Confidence 35554443 456777777 999999999876 58999999999999999999999999999999987310
Q ss_pred cccccccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhh
Q 013862 80 TIMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELL 159 (435)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (435)
..
T Consensus 141 --------~~---------------------------------------------------------------------- 142 (210)
T 1imj_A 141 --------KI---------------------------------------------------------------------- 142 (210)
T ss_dssp --------GS----------------------------------------------------------------------
T ss_pred --------cc----------------------------------------------------------------------
Confidence 00
Q ss_pred hhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhcccccc
Q 013862 160 KSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 160 ~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~ 236 (435)
....+.++++|+++++|++|. ++.+ ..+.+ +..+++++++++++||+++.++|+++.+.|.+ |+++
T Consensus 143 ------~~~~~~~~~~p~l~i~g~~D~-~~~~-~~~~~-~~~~~~~~~~~~~~~H~~~~~~~~~~~~~i~~--fl~~ 208 (210)
T 1imj_A 143 ------NAANYASVKTPALIVYGDQDP-MGQT-SFEHL-KQLPNHRVLIMKGAGHPCYLDKPEEWHTGLLD--FLQG 208 (210)
T ss_dssp ------CHHHHHTCCSCEEEEEETTCH-HHHH-HHHHH-TTSSSEEEEEETTCCTTHHHHCHHHHHHHHHH--HHHT
T ss_pred ------cchhhhhCCCCEEEEEcCccc-CCHH-HHHHH-hhCCCCCEEEecCCCcchhhcCHHHHHHHHHH--HHHh
Confidence 012234578999999999999 9888 68888 88899999999999999999999999999999 7754
|
| >3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus} | Back alignment and structure |
|---|
Probab=99.65 E-value=7.5e-16 Score=137.42 Aligned_cols=176 Identities=17% Similarity=0.121 Sum_probs=107.6
Q ss_pred CCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHH---hCCCceeEEEEecCCcccccccccccccccccc
Q 013862 12 GHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAA---RNPDMDLVLILANPATSFRKSLLQTIMPIPAEL 88 (435)
Q Consensus 12 ~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~---~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~ 88 (435)
.++++++++++.++++.+.. .++++|+||||||.+|+.+|. .+|++++++|++++...... ..
T Consensus 64 ~~~~~~~~~~~~~~i~~~~~---~~~~~l~GhS~Gg~ia~~~a~~l~~~~~~v~~lvl~~~~~~~~~-----------~~ 129 (265)
T 3ils_A 64 NCTHGAMIESFCNEIRRRQP---RGPYHLGGWSSGGAFAYVVAEALVNQGEEVHSLIIIDAPIPQAM-----------EQ 129 (265)
T ss_dssp CCCHHHHHHHHHHHHHHHCS---SCCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCSSCCC-----------CC
T ss_pred CCCHHHHHHHHHHHHHHhCC---CCCEEEEEECHhHHHHHHHHHHHHhCCCCceEEEEEcCCCCCcc-----------cc
Confidence 47999999999999998854 258999999999999999998 78889999999987743211 11
Q ss_pred ccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhh
Q 013862 89 MSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANA 168 (435)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (435)
...........+.... ..+.. ......+..+.....+.. .++....+...
T Consensus 130 ~~~~~~~~~~~~~~~~-~~~~~-------~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~ 179 (265)
T 3ils_A 130 LPRAFYEHCNSIGLFA-TQPGA-------SPDGSTEPPSYLIPHFTA----------------------VVDVMLDYKLA 179 (265)
T ss_dssp CCHHHHHHHHHTTTTT-TSSSS-------CSSSCSCCCTTHHHHHHH----------------------HHHHTTTCCCC
T ss_pred cCHHHHHHHHHHHHhC-CCccc-------cccCCHHHHHHHHHHHHH----------------------HHHHHHhcCCC
Confidence 1111111111110000 00000 000000000000000000 00000001112
Q ss_pred hcccccceEE-EEeeCC---CCCC--------------CChhHHHHHHhhCC--CceEEEeCCCCcccc--ccCchhHHH
Q 013862 169 RLDAVKAQTL-ILCSGR---DQLL--------------PSEEEGDRLCRALP--NCQTRRFGGGGHFLF--LEDGVDLVT 226 (435)
Q Consensus 169 ~l~~i~~Pvl-ii~G~~---D~~~--------------~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~--~e~pe~~~~ 226 (435)
....+++|++ +++|++ |..+ +.. ....+.+..+ ++++++++||||+.+ .|+|+++++
T Consensus 180 ~~~~i~~P~~lii~G~~~~~D~~~~~~~~~~~~~~~~~~~~-~~~~w~~~~~~~~~~~~~i~gagH~~~~~~e~~~~v~~ 258 (265)
T 3ils_A 180 PLHARRMPKVGIVWAADTVMDERDAPKMKGMHFMIQKRTEF-GPDGWDTIMPGASFDIVRADGANHFTLMQKEHVSIISD 258 (265)
T ss_dssp CCCCSSCCEEEEEEEEECSSCTTTSCCCSSCCTTTSCCCCC-SCTTHHHHSTTCCEEEEEEEEEETTGGGSTTTTHHHHH
T ss_pred CCccCCCCeEEEEEccCCCCccccCccccCcchhhcccccc-CcchHHHhCCccceeEEEcCCCCcceeeChhhHHHHHH
Confidence 3347899988 999999 9887 333 3455666665 789999999999999 899999999
Q ss_pred HHhhcccc
Q 013862 227 TIKGAGYY 234 (435)
Q Consensus 227 ~I~~~~Fl 234 (435)
.|.+ |+
T Consensus 259 ~i~~--fL 264 (265)
T 3ils_A 259 LIDR--VM 264 (265)
T ss_dssp HHHH--HT
T ss_pred HHHH--Hh
Confidence 9999 76
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} | Back alignment and structure |
|---|
Probab=99.64 E-value=1.3e-16 Score=148.58 Aligned_cols=60 Identities=22% Similarity=0.245 Sum_probs=52.3
Q ss_pred CCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhC-CCceeEEEEecCCc
Q 013862 12 GHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARN-PDMDLVLILANPAT 71 (435)
Q Consensus 12 ~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~-p~~v~~lVli~~~~ 71 (435)
.++++++++|+.++++++....+.++++++||||||.+++.+|.++ |++|+++|++++.+
T Consensus 120 ~~~~~~~~~d~~~~~~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~p~~v~~lvl~~~~~ 180 (354)
T 2rau_A 120 NWGWSTWISDIKEVVSFIKRDSGQERIYLAGESFGGIAALNYSSLYWKNDIKGLILLDGGP 180 (354)
T ss_dssp TCSHHHHHHHHHHHHHHHHHHHCCSSEEEEEETHHHHHHHHHHHHHHHHHEEEEEEESCSC
T ss_pred CCcHHHHHHHHHHHHHHHHHhcCCceEEEEEECHhHHHHHHHHHhcCccccceEEEecccc
Confidence 6889999999999999864332336899999999999999999999 99999999997664
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 | Back alignment and structure |
|---|
Probab=99.64 E-value=2.2e-15 Score=131.53 Aligned_cols=146 Identities=19% Similarity=0.135 Sum_probs=107.7
Q ss_pred ChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccccchh
Q 013862 14 HFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQM 93 (435)
Q Consensus 14 s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (435)
++++.++|+.++++.+..... ++++++|||+||.+|+.+|.++|+.+++++++++....... ....
T Consensus 84 ~~~~~~~d~~~~~~~l~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~----------~~~~--- 149 (238)
T 1ufo_A 84 VALGFKEEARRVAEEAERRFG-LPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKLP----------QGQV--- 149 (238)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-CCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCCSSCCCCC----------TTCC---
T ss_pred HHHHHHHHHHHHHHHHHhccC-CcEEEEEEChHHHHHHHHHHhccCcceEEEEecCCccchhh----------hhhc---
Confidence 477889999999998754322 68999999999999999999999999999998876422110 0000
Q ss_pred HHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhcccc
Q 013862 94 TLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARLDAV 173 (435)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 173 (435)
. .+.+ ..... .......+.++
T Consensus 150 ------------~--------------~~~~-----~~~~~----------------------------~~~~~~~~~~~ 170 (238)
T 1ufo_A 150 ------------V--------------EDPG-----VLALY----------------------------QAPPATRGEAY 170 (238)
T ss_dssp ------------C--------------CCHH-----HHHHH----------------------------HSCGGGCGGGG
T ss_pred ------------c--------------CCcc-----cchhh----------------------------cCChhhhhhhc
Confidence 0 0000 00000 00112345566
Q ss_pred -cceEEEEeeCCCCCCCChhHHHHHHhhCC------CceEEEeCCCCccccccCchhHHHHHhhccccc
Q 013862 174 -KAQTLILCSGRDQLLPSEEEGDRLCRALP------NCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYR 235 (435)
Q Consensus 174 -~~Pvlii~G~~D~~~~~~~~~~~~~~~~~------~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~ 235 (435)
++|+++++|++|.+++.+ ..+.+.+.++ +.++++++++||..+.+.++++.+.|.+ |++
T Consensus 171 ~~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~l~~--~l~ 236 (238)
T 1ufo_A 171 GGVPLLHLHGSRDHIVPLA-RMEKTLEALRPHYPEGRLARFVEEGAGHTLTPLMARVGLAFLEH--WLE 236 (238)
T ss_dssp TTCCEEEEEETTCTTTTHH-HHHHHHHHHGGGCTTCCEEEEEETTCCSSCCHHHHHHHHHHHHH--HHH
T ss_pred cCCcEEEEECCCCCccCcH-HHHHHHHHHhhcCCCCceEEEEeCCCCcccHHHHHHHHHHHHHH--HHh
Confidence 899999999999999998 6888888887 8899999999999999999998888887 654
|
| >3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.63 E-value=3e-15 Score=133.43 Aligned_cols=197 Identities=13% Similarity=0.115 Sum_probs=112.5
Q ss_pred CCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccccc
Q 013862 12 GHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSG 91 (435)
Q Consensus 12 ~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~ 91 (435)
..+.....+|+.+.++.+....+.++++|+||||||.+|+.+|.+ ++++++|+++|............... ......
T Consensus 72 ~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~--~~v~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~ 148 (275)
T 3h04_A 72 EVSLDCIIEDVYASFDAIQSQYSNCPIFTFGRSSGAYLSLLIARD--RDIDGVIDFYGYSRINTEPFKTTNSY-YAKIAQ 148 (275)
T ss_dssp TSCHHHHHHHHHHHHHHHHHTTTTSCEEEEEETHHHHHHHHHHHH--SCCSEEEEESCCSCSCSHHHHSCCHH-HHHHHT
T ss_pred ccccchhHHHHHHHHHHHHhhCCCCCEEEEEecHHHHHHHHHhcc--CCccEEEeccccccccccccccccch-hhcccc
Confidence 346677788888888777665555799999999999999999999 89999999998864422211100000 000000
Q ss_pred hhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhcc
Q 013862 92 QMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARLD 171 (435)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 171 (435)
. .............. ............... ..........+.... .. +. ........+.
T Consensus 149 ~---~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~---~~------~~~~~~~~~~ 207 (275)
T 3h04_A 149 S---INETMIAQLTSPTP-----VVQDQIAQRFLIYVY---ARGTGKWINMINIAD-YT---DS------KYNIAPDELK 207 (275)
T ss_dssp T---SCHHHHHTTSCSSC-----CSSCSSGGGHHHHHH---HHHHTCHHHHHCCSC-TT---SG------GGSCCHHHHT
T ss_pred c---chHHHHhcccCCCC-----cCCCccccchhhhhh---hhhcCchHHhhcccc-cc---cc------ccccccchhc
Confidence 0 00000000000000 000000000000000 000000000000000 00 00 0000123345
Q ss_pred cccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCc---hhHHHHHhhcccccc
Q 013862 172 AVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDG---VDLVTTIKGAGYYRR 236 (435)
Q Consensus 172 ~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p---e~~~~~I~~~~Fl~~ 236 (435)
+++ |+|+++|++|.+++.+ ..+.+.+.+++.++++++++||.++.+.+ +++.+.+.+ |+++
T Consensus 208 ~~~-P~lii~G~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~i~~--fl~~ 271 (275)
T 3h04_A 208 TLP-PVFIAHCNGDYDVPVE-ESEHIMNHVPHSTFERVNKNEHDFDRRPNDEAITIYRKVVD--FLNA 271 (275)
T ss_dssp TCC-CEEEEEETTCSSSCTH-HHHHHHTTCSSEEEEEECSSCSCTTSSCCHHHHHHHHHHHH--HHHH
T ss_pred cCC-CEEEEecCCCCCCChH-HHHHHHHhcCCceEEEeCCCCCCcccCCchhHHHHHHHHHH--HHHH
Confidence 667 9999999999999999 79999999999999999999999999999 588888888 7754
|
| >2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.62 E-value=6.7e-15 Score=135.79 Aligned_cols=188 Identities=12% Similarity=-0.002 Sum_probs=102.4
Q ss_pred CChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHH--hCCCceeEEEEecCCccccccccccccccccccc-
Q 013862 13 HHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAA--RNPDMDLVLILANPATSFRKSLLQTIMPIPAELM- 89 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~--~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~- 89 (435)
.+..+.++|+.++++.+....+.++++|+||||||.+|+.+|. .+|++|+++|++++..... .. . ....
T Consensus 85 S~~~~~~~d~~~~~~~l~~~l~~~~~~LvGhSmGG~iAl~~A~~~~~p~rV~~lVL~~~~~~~~-~~------~-~~~~~ 156 (335)
T 2q0x_A 85 QDHAHDAEDVDDLIGILLRDHCMNEVALFATSTGTQLVFELLENSAHKSSITRVILHGVVCDPE-NP------L-FTPEG 156 (335)
T ss_dssp CCHHHHHHHHHHHHHHHHHHSCCCCEEEEEEGGGHHHHHHHHHHCTTGGGEEEEEEEEECCCTT-ST------T-TSHHH
T ss_pred ccccCcHHHHHHHHHHHHHHcCCCcEEEEEECHhHHHHHHHHHhccchhceeEEEEECCcccch-hc------c-cCHHH
Confidence 4566778888888877543223368999999999999999999 5799999999998764321 00 0 0000
Q ss_pred cchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhh-hhHHhhhhhhhhhhhh
Q 013862 90 SGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETL-LWKLELLKSASAYANA 168 (435)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 168 (435)
..........+........... . ...... ......+......... ............+..+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (335)
T 2q0x_A 157 CAARKEHVEKLMAEGRGEDSLA----M-LKHYDI-------------PITPARLAGGGFPTLQEAVWNPCIRKEFDVLRR 218 (335)
T ss_dssp HHHHHHHHHHHHHHTCTTCGGG----G-TTTCSS-------------CCCHHHHHTCSCSSHHHHTHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHhhccCcccccc----c-hhhccC-------------ccCHHHHhhccCCCchhhhhhhhhhhhhhHHHH
Confidence 0000000011100000000000 0 000000 0000000000000000 0000000001122346
Q ss_pred hcccccceEEEEeeCCCCCCCChh----HHHHHHhhCCCce--------E-----EEeCCCCccccccCchhHHHHHhhc
Q 013862 169 RLDAVKAQTLILCSGRDQLLPSEE----EGDRLCRALPNCQ--------T-----RRFGGGGHFLFLEDGVDLVTTIKGA 231 (435)
Q Consensus 169 ~l~~i~~Pvlii~G~~D~~~~~~~----~~~~~~~~~~~~~--------~-----~~i~~~gH~~~~e~pe~~~~~I~~~ 231 (435)
.+.++++|+|+|+|++|.++|+.. ..+.+.+.+++++ + ++++++|| ++++.|.+
T Consensus 219 ~l~~i~~PtLvi~G~~D~~vp~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~agH--------e~~~~i~~- 289 (335)
T 2q0x_A 219 SVGVIKVPLLLMLAHNVQYKPSDEEVGTVLEGVRDHTGCNRVTVSYFNDTCDELRRVLKAAES--------EHVAAILQ- 289 (335)
T ss_dssp TGGGCCSCEEEEEECCTTCCCCHHHHHHHHHHHHHHSSSSCEEEEECCCEECTTSCEEECCHH--------HHHHHHHH-
T ss_pred HHhcCCCCeEEEEecCCCCCChhhhHHHHHHHHHHhcCccccccccccchhhhhhcccCCCCC--------HHHHHHHH-
Confidence 788999999999999999999861 2467788889887 6 89999999 34888888
Q ss_pred ccccc
Q 013862 232 GYYRR 236 (435)
Q Consensus 232 ~Fl~~ 236 (435)
|+.+
T Consensus 290 -FL~~ 293 (335)
T 2q0x_A 290 -FLAD 293 (335)
T ss_dssp -HHHH
T ss_pred -HHHh
Confidence 7753
|
| >3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=99.60 E-value=9.7e-15 Score=125.02 Aligned_cols=123 Identities=20% Similarity=0.237 Sum_probs=99.4
Q ss_pred hHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccccchhH
Q 013862 15 FTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMT 94 (435)
Q Consensus 15 ~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (435)
.....+|+.++++.+....+.++++++||||||.+++.++ .+| +++++|++++...
T Consensus 84 ~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a-~~~-~v~~~v~~~~~~~---------------------- 139 (208)
T 3trd_A 84 GVGEVEDLKAVLRWVEHHWSQDDIWLAGFSFGAYISAKVA-YDQ-KVAQLISVAPPVF---------------------- 139 (208)
T ss_dssp TTHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHH-HHS-CCSEEEEESCCTT----------------------
T ss_pred hHHHHHHHHHHHHHHHHhCCCCeEEEEEeCHHHHHHHHHh-ccC-CccEEEEeccccc----------------------
Confidence 3456778888888776655557999999999999999999 777 9999999988720
Q ss_pred HHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhccccc
Q 013862 95 LTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARLDAVK 174 (435)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 174 (435)
. .....+..++
T Consensus 140 -------------------------------------~--------------------------------~~~~~~~~~~ 150 (208)
T 3trd_A 140 -------------------------------------Y--------------------------------EGFASLTQMA 150 (208)
T ss_dssp -------------------------------------S--------------------------------GGGTTCCSCC
T ss_pred -------------------------------------c--------------------------------CCchhhhhcC
Confidence 0 0002234458
Q ss_pred ceEEEEeeCCCCCCCChhHHHHHHhhCCC-ceEEEeCCCCccccccCchhHHHHHhhcccc
Q 013862 175 AQTLILCSGRDQLLPSEEEGDRLCRALPN-CQTRRFGGGGHFLFLEDGVDLVTTIKGAGYY 234 (435)
Q Consensus 175 ~Pvlii~G~~D~~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl 234 (435)
+|+++++|++|.+++.+ ..+.+.+.+++ .++++++++||++..+. +++.+.|.+ |+
T Consensus 151 ~p~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~H~~~~~~-~~~~~~i~~--fl 207 (208)
T 3trd_A 151 SPWLIVQGDQDEVVPFE-QVKAFVNQISSPVEFVVMSGASHFFHGRL-IELRELLVR--NL 207 (208)
T ss_dssp SCEEEEEETTCSSSCHH-HHHHHHHHSSSCCEEEEETTCCSSCTTCH-HHHHHHHHH--HH
T ss_pred CCEEEEECCCCCCCCHH-HHHHHHHHccCceEEEEeCCCCCcccccH-HHHHHHHHH--Hh
Confidence 99999999999999999 68889888887 89999999999998775 888888888 65
|
| >2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.59 E-value=1.8e-14 Score=127.19 Aligned_cols=129 Identities=18% Similarity=0.269 Sum_probs=105.3
Q ss_pred CChHHHHHHHHHHHHHhhhcCCC-CCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccccc
Q 013862 13 HHFTGLLKLIERTIRSENCRSSN-RPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSG 91 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~~~~-~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~ 91 (435)
.+.+++ +|+.++++.+.....+ ++++++||||||.+++.+|.++|+ ++++|++++.... ..
T Consensus 99 ~~~~~~-~d~~~~i~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~------------~~---- 160 (249)
T 2i3d_A 99 HGAGEL-SDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRPE-IEGFMSIAPQPNT------------YD---- 160 (249)
T ss_dssp SSHHHH-HHHHHHHHHHHHHCTTCCCEEEEEETHHHHHHHHHHHHCTT-EEEEEEESCCTTT------------SC----
T ss_pred CccchH-HHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcCCC-ccEEEEEcCchhh------------hh----
Confidence 345665 8999999988765333 379999999999999999999998 9999999987320 00
Q ss_pred hhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhcc
Q 013862 92 QMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARLD 171 (435)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 171 (435)
...+.
T Consensus 161 ---------------------------------------------------------------------------~~~~~ 165 (249)
T 2i3d_A 161 ---------------------------------------------------------------------------FSFLA 165 (249)
T ss_dssp ---------------------------------------------------------------------------CTTCT
T ss_pred ---------------------------------------------------------------------------hhhhc
Confidence 02244
Q ss_pred cccceEEEEeeCCCCCCCChhHHHHHHhhCC-----CceEEEeCCCCccccccCchhHHHHHhhcccccccc
Q 013862 172 AVKAQTLILCSGRDQLLPSEEEGDRLCRALP-----NCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRRGR 238 (435)
Q Consensus 172 ~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~-----~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~~~ 238 (435)
++++|+++++|++|.+++.+ ..+.+.+.++ +.++++++++||... ++++++.+.|.+ |+.+..
T Consensus 166 ~~~~P~lii~G~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~-~~~~~~~~~i~~--fl~~~l 233 (249)
T 2i3d_A 166 PCPSSGLIINGDADKVAPEK-DVNGLVEKLKTQKGILITHRTLPGANHFFN-GKVDELMGECED--YLDRRL 233 (249)
T ss_dssp TCCSCEEEEEETTCSSSCHH-HHHHHHHHHTTSTTCCEEEEEETTCCTTCT-TCHHHHHHHHHH--HHHHHH
T ss_pred ccCCCEEEEEcCCCCCCCHH-HHHHHHHHHhhccCCceeEEEECCCCcccc-cCHHHHHHHHHH--HHHHhc
Confidence 67899999999999999998 6888888877 779999999999988 899999999999 886543
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.59 E-value=1.4e-14 Score=120.49 Aligned_cols=124 Identities=23% Similarity=0.262 Sum_probs=99.2
Q ss_pred CCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccccccccccccccccc
Q 013862 11 IGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMS 90 (435)
Q Consensus 11 ~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~ 90 (435)
...++.+.++++.+.++.... .++++++||||||.+++.++.++| ++++|+++|..... ...
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~---~~~~~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~~-------------~~~ 113 (176)
T 2qjw_A 52 QLGDVRGRLQRLLEIARAATE---KGPVVLAGSSLGSYIAAQVSLQVP--TRALFLMVPPTKMG-------------PLP 113 (176)
T ss_dssp TTCCHHHHHHHHHHHHHHHHT---TSCEEEEEETHHHHHHHHHHTTSC--CSEEEEESCCSCBT-------------TBC
T ss_pred CCCCHHHHHHHHHHHHHhcCC---CCCEEEEEECHHHHHHHHHHHhcC--hhheEEECCcCCcc-------------ccC
Confidence 345677777777777777652 368999999999999999999999 99999999874311 000
Q ss_pred chhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhc
Q 013862 91 GQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARL 170 (435)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 170 (435)
. +
T Consensus 114 ~------------------------------------------------------------------------------~ 115 (176)
T 2qjw_A 114 A------------------------------------------------------------------------------L 115 (176)
T ss_dssp C------------------------------------------------------------------------------C
T ss_pred c------------------------------------------------------------------------------c
Confidence 0 3
Q ss_pred ccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhcccccc
Q 013862 171 DAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 171 ~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~ 236 (435)
..+++|+++++|++|.+++.+ ..+.+.+.. +++++++ ++||.. .++++++.+.|.+ |+++
T Consensus 116 ~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~-~~~~~~~-~~~H~~-~~~~~~~~~~i~~--fl~~ 175 (176)
T 2qjw_A 116 DAAAVPISIVHAWHDELIPAA-DVIAWAQAR-SARLLLV-DDGHRL-GAHVQAASRAFAE--LLQS 175 (176)
T ss_dssp CCCSSCEEEEEETTCSSSCHH-HHHHHHHHH-TCEEEEE-SSCTTC-TTCHHHHHHHHHH--HHHT
T ss_pred cccCCCEEEEEcCCCCccCHH-HHHHHHHhC-CceEEEe-CCCccc-cccHHHHHHHHHH--HHHh
Confidence 456899999999999999998 688887776 7899999 899998 4889999999999 7753
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A | Back alignment and structure |
|---|
Probab=99.58 E-value=9.3e-15 Score=122.28 Aligned_cols=126 Identities=16% Similarity=0.169 Sum_probs=99.0
Q ss_pred CChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhC--CCceeEEEEecCCcccccccccccccccccccc
Q 013862 13 HHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARN--PDMDLVLILANPATSFRKSLLQTIMPIPAELMS 90 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~--p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~ 90 (435)
++.+++++++.+++++++. ++++|+||||||.+++.++.++ |++|+++|++++...... ..
T Consensus 50 ~~~~~~~~~~~~~~~~~~~----~~~~lvG~S~Gg~~a~~~~~~~~~~~~v~~~v~~~~~~~~~~----------~~--- 112 (181)
T 1isp_A 50 NNGPVLSRFVQKVLDETGA----KKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTT----------GK--- 112 (181)
T ss_dssp HHHHHHHHHHHHHHHHHCC----SCEEEEEETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTC----------SB---
T ss_pred hhHHHHHHHHHHHHHHcCC----CeEEEEEECccHHHHHHHHHhcCCCceEEEEEEEcCcccccc----------cc---
Confidence 4578889999999998866 5899999999999999999998 999999999998742100 00
Q ss_pred chhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhc
Q 013862 91 GQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARL 170 (435)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 170 (435)
.+.. ..
T Consensus 113 -------------------------------------------------------~~~~-------------------~~ 118 (181)
T 1isp_A 113 -------------------------------------------------------ALPG-------------------TD 118 (181)
T ss_dssp -------------------------------------------------------CCCC-------------------SC
T ss_pred -------------------------------------------------------cCCC-------------------CC
Confidence 0000 00
Q ss_pred ccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhcccccccc
Q 013862 171 DAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRRGR 238 (435)
Q Consensus 171 ~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~~~ 238 (435)
...++|+++++|++|.+++.+ .. ..+++++++++++||+.+.++| ++.+.|.+ |+.+..
T Consensus 119 ~~~~~p~l~i~G~~D~~v~~~-~~-----~~~~~~~~~~~~~gH~~~~~~~-~~~~~i~~--fl~~~~ 177 (181)
T 1isp_A 119 PNQKILYTSIYSSADMIVMNY-LS-----RLDGARNVQIHGVGHIGLLYSS-QVNSLIKE--GLNGGG 177 (181)
T ss_dssp TTCCCEEEEEEETTCSSSCHH-HH-----CCBTSEEEEESSCCTGGGGGCH-HHHHHHHH--HHTTTC
T ss_pred CccCCcEEEEecCCCcccccc-cc-----cCCCCcceeeccCchHhhccCH-HHHHHHHH--HHhccC
Confidence 012579999999999999987 32 3788999999999999999997 79999999 886543
|
| >4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.58 E-value=2.6e-14 Score=121.82 Aligned_cols=156 Identities=15% Similarity=0.109 Sum_probs=101.9
Q ss_pred cCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccc
Q 013862 8 QLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAE 87 (435)
Q Consensus 8 p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~ 87 (435)
.++-...-++..+++..+++.+.. ++++|+||||||.+|+.+|.++|+.+..++...+............
T Consensus 38 ~pdl~~~g~~~~~~l~~~~~~~~~----~~i~l~G~SmGG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 107 (202)
T 4fle_A 38 IPQLPPYPAEAAEMLESIVMDKAG----QSIGIVGSSLGGYFATWLSQRFSIPAVVVNPAVRPFELLSDYLGEN------ 107 (202)
T ss_dssp CCCCCSSHHHHHHHHHHHHHHHTT----SCEEEEEETHHHHHHHHHHHHTTCCEEEESCCSSHHHHGGGGCEEE------
T ss_pred EeCCCCCHHHHHHHHHHHHHhcCC----CcEEEEEEChhhHHHHHHHHHhcccchheeeccchHHHHHHhhhhh------
Confidence 345556678889999999888766 5899999999999999999999998877665543321100000000
Q ss_pred cccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhh
Q 013862 88 LMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYAN 167 (435)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (435)
... .... ...... ..... .....
T Consensus 108 ~~~-------------~~~~----------~~~~~~----~~~~~------------------------------~~~~~ 130 (202)
T 4fle_A 108 QNP-------------YTGQ----------KYVLES----RHIYD------------------------------LKAMQ 130 (202)
T ss_dssp ECT-------------TTCC----------EEEECH----HHHHH------------------------------HHTTC
T ss_pred ccc-------------cccc----------cccchH----HHHHH------------------------------HHhhh
Confidence 000 0000 000000 00000 00112
Q ss_pred hhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhcccccccc
Q 013862 168 ARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRRGR 238 (435)
Q Consensus 168 ~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~~~ 238 (435)
....++++|+|+|+|++|.++|.+ .+.++ .+++++.+++|+||. +++++++.+.|.+ ||+...
T Consensus 131 ~~~~~~~~P~LiihG~~D~~Vp~~-~s~~l---~~~~~l~i~~g~~H~--~~~~~~~~~~I~~--FL~~a~ 193 (202)
T 4fle_A 131 IEKLESPDLLWLLQQTGDEVLDYR-QAVAY---YTPCRQTVESGGNHA--FVGFDHYFSPIVT--FLGLAT 193 (202)
T ss_dssp CSSCSCGGGEEEEEETTCSSSCHH-HHHHH---TTTSEEEEESSCCTT--CTTGGGGHHHHHH--HHTCCC
T ss_pred hhhhccCceEEEEEeCCCCCCCHH-HHHHH---hhCCEEEEECCCCcC--CCCHHHHHHHHHH--HHhhhh
Confidence 345678999999999999999988 56655 568999999999996 3677888888999 986443
|
| >2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.57 E-value=4.9e-15 Score=131.79 Aligned_cols=148 Identities=13% Similarity=0.092 Sum_probs=108.6
Q ss_pred CCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhC------CCceeEEEEecCCcccccccccccccc
Q 013862 11 IGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARN------PDMDLVLILANPATSFRKSLLQTIMPI 84 (435)
Q Consensus 11 ~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~------p~~v~~lVli~~~~~~~~~~~~~~~~~ 84 (435)
..+++.++++|+.++++.+..... ++++|+||||||.+|+.+|.++ |++++++|+++|.......
T Consensus 105 ~~~~~~~~~~d~~~~~~~l~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~v~~~vl~~~~~~~~~~-------- 175 (262)
T 2pbl_A 105 PEVRISEITQQISQAVTAAAKEID-GPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPL-------- 175 (262)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHSC-SCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGG--------
T ss_pred CCCChHHHHHHHHHHHHHHHHhcc-CCEEEEEECHHHHHHHHHhccccccccccccceEEEEecCccCchHH--------
Confidence 357899999999999999977433 5899999999999999999998 8999999999987432110
Q ss_pred ccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhh
Q 013862 85 PAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASA 164 (435)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (435)
.... . ... . ... . ..... .
T Consensus 176 -~~~~---~----~~~---~--------------~~~-~-------~~~~~-----------~----------------- 194 (262)
T 2pbl_A 176 -LRTS---M----NEK---F--------------KMD-A-------DAAIA-----------E----------------- 194 (262)
T ss_dssp -GGST---T----HHH---H--------------CCC-H-------HHHHH-----------T-----------------
T ss_pred -Hhhh---h----hhh---h--------------CCC-H-------HHHHh-----------c-----------------
Confidence 0000 0 000 0 000 0 00000 0
Q ss_pred hhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhh
Q 013862 165 YANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKG 230 (435)
Q Consensus 165 ~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~ 230 (435)
.....+..+++|+++++|++|..++.+ ..+.+.+.++ +++++++++||+.+.|++++....+.+
T Consensus 195 ~~~~~~~~~~~P~lii~G~~D~~~~~~-~~~~~~~~~~-~~~~~~~~~~H~~~~~~~~~~~~~l~~ 258 (262)
T 2pbl_A 195 SPVEMQNRYDAKVTVWVGGAERPAFLD-QAIWLVEAWD-ADHVIAFEKHHFNVIEPLADPESDLVA 258 (262)
T ss_dssp CGGGCCCCCSCEEEEEEETTSCHHHHH-HHHHHHHHHT-CEEEEETTCCTTTTTGGGGCTTCHHHH
T ss_pred CcccccCCCCCCEEEEEeCCCCcccHH-HHHHHHHHhC-CeEEEeCCCCcchHHhhcCCCCcHHHH
Confidence 001234567899999999999999988 6888988888 999999999999999999888777766
|
| >1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.56 E-value=1.2e-14 Score=126.43 Aligned_cols=133 Identities=17% Similarity=0.073 Sum_probs=99.8
Q ss_pred CCCChHHHHHHHHHHHHHhhhcC-CCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccc
Q 013862 11 IGHHFTGLLKLIERTIRSENCRS-SNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELM 89 (435)
Q Consensus 11 ~~~s~~~~a~dl~~~l~~l~~~~-~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~ 89 (435)
..++++++++|+.++++++.... ..++++++||||||.+|+.+|.++|++++++|++++...... ..
T Consensus 87 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~------------~~ 154 (232)
T 1fj2_A 87 DESGIKQAAENIKALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRA------------SF 154 (232)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGG------------GS
T ss_pred ccHHHHHHHHHHHHHHHHHhcCCCCcCCEEEEEECHHHHHHHHHHHhCCCceeEEEEeecCCCCCc------------cc
Confidence 34678899999999999873211 125899999999999999999999999999999998742110 00
Q ss_pred cchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhh
Q 013862 90 SGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANAR 169 (435)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (435)
.. ....
T Consensus 155 ~~--------------------------------------------------------------------------~~~~ 160 (232)
T 1fj2_A 155 PQ--------------------------------------------------------------------------GPIG 160 (232)
T ss_dssp CS--------------------------------------------------------------------------SCCC
T ss_pred cc--------------------------------------------------------------------------cccc
Confidence 00 0123
Q ss_pred cccccceEEEEeeCCCCCCCChhHHHHHHhhC------CCceEEEeCCCCccccccCchhHHHHHhh
Q 013862 170 LDAVKAQTLILCSGRDQLLPSEEEGDRLCRAL------PNCQTRRFGGGGHFLFLEDGVDLVTTIKG 230 (435)
Q Consensus 170 l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~------~~~~~~~i~~~gH~~~~e~pe~~~~~I~~ 230 (435)
+..+++|+++++|++|.+++.+ ..+.+.+.+ ++.++++++++||..+.|.++++.+.|.+
T Consensus 161 ~~~~~~P~l~i~G~~D~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~H~~~~~~~~~i~~~l~~ 226 (232)
T 1fj2_A 161 GANRDISILQCHGDCDPLVPLM-FGSLTVEKLKTLVNPANVTFKTYEGMMHSSCQQEMMDVKQFIDK 226 (232)
T ss_dssp STTTTCCEEEEEETTCSSSCHH-HHHHHHHHHHHHSCGGGEEEEEETTCCSSCCHHHHHHHHHHHHH
T ss_pred cccCCCCEEEEecCCCccCCHH-HHHHHHHHHHHhCCCCceEEEEeCCCCcccCHHHHHHHHHHHHH
Confidence 4567899999999999999988 577666555 56899999999999976666555555554
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=99.56 E-value=1.8e-14 Score=124.47 Aligned_cols=130 Identities=16% Similarity=0.117 Sum_probs=105.9
Q ss_pred CCChHHHHHHHHHHHHHhhhcC--CCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccc
Q 013862 12 GHHFTGLLKLIERTIRSENCRS--SNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELM 89 (435)
Q Consensus 12 ~~s~~~~a~dl~~~l~~l~~~~--~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~ 89 (435)
.++++++++|+.++++.+.... ..++++++|||+||.+++.++.++|++++++|++++... ..
T Consensus 88 ~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~-------------~~-- 152 (223)
T 2o2g_A 88 RFDIGLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVSRGGRPD-------------LA-- 152 (223)
T ss_dssp TTCHHHHHHHHHHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCGG-------------GC--
T ss_pred cCcHHHHHHHHHHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCCceEEEEEeCCCCC-------------cC--
Confidence 3789999999999999987642 234899999999999999999999999999999987521 00
Q ss_pred cchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhh
Q 013862 90 SGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANAR 169 (435)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (435)
...
T Consensus 153 -----------------------------------------------------------------------------~~~ 155 (223)
T 2o2g_A 153 -----------------------------------------------------------------------------PSA 155 (223)
T ss_dssp -----------------------------------------------------------------------------TTT
T ss_pred -----------------------------------------------------------------------------HHH
Confidence 022
Q ss_pred cccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccc-cCchhHHHHHhhcccccc
Q 013862 170 LDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFL-EDGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 170 l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~-e~pe~~~~~I~~~~Fl~~ 236 (435)
+.++++|+++++|++|..++.. ..+.+.+..++.++++++++||.... +.++++.+.+.+ |+++
T Consensus 156 ~~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~--fl~~ 220 (223)
T 2o2g_A 156 LPHVKAPTLLIVGGYDLPVIAM-NEDALEQLQTSKRLVIIPRASHLFEEPGALTAVAQLASE--WFMH 220 (223)
T ss_dssp GGGCCSCEEEEEETTCHHHHHH-HHHHHHHCCSSEEEEEETTCCTTCCSTTHHHHHHHHHHH--HHHH
T ss_pred HhcCCCCEEEEEccccCCCCHH-HHHHHHhhCCCeEEEEeCCCCcccCChHHHHHHHHHHHH--HHHH
Confidence 4456899999999999999866 56667677688999999999999776 567889999998 7653
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.55 E-value=1.6e-14 Score=130.46 Aligned_cols=169 Identities=15% Similarity=0.140 Sum_probs=113.5
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcC--CCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRS--SNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQ 79 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~--~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~ 79 (435)
+|.|..+ ...++++++++|+.++++.+.... +.++++|+||||||.+++.+|.++| ++++++++|.......
T Consensus 66 ~g~s~~~-~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~--~~~~~l~~p~~~~~~~--- 139 (290)
T 3ksr_A 66 HEGYASM-RQSVTRAQNLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP--VEWLALRSPALYKDAH--- 139 (290)
T ss_dssp SGGGGGG-TTTCBHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC--CSEEEEESCCCCCSSC---
T ss_pred CCCCCCC-cccccHHHHHHHHHHHHHHHHhcCCCCccceEEEEEchHHHHHHHHHHhCC--CCEEEEeCcchhhhhh---
Confidence 3555433 345789999999999999986531 1247999999999999999999998 8889998877432110
Q ss_pred cccccccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhh
Q 013862 80 TIMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELL 159 (435)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (435)
...... .... . .....+. ......
T Consensus 140 --------~~~~~~--~~~~-----------------------~----~~~~~~~----------~~~~~~--------- 163 (290)
T 3ksr_A 140 --------WDQPKV--SLNA-----------------------D----PDLMDYR----------RRALAP--------- 163 (290)
T ss_dssp --------TTSBHH--HHHH-----------------------S----TTHHHHT----------TSCCCG---------
T ss_pred --------hhcccc--cccC-----------------------C----hhhhhhh----------hhhhhh---------
Confidence 000000 0000 0 0000000 000000
Q ss_pred hhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCc---eEEEeCCCCcccccc-CchhHHHHHhhccccc
Q 013862 160 KSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNC---QTRRFGGGGHFLFLE-DGVDLVTTIKGAGYYR 235 (435)
Q Consensus 160 ~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~---~~~~i~~~gH~~~~e-~pe~~~~~I~~~~Fl~ 235 (435)
........+.++++|+|+++|++|.+++.+ ..+.+.+.+++. ++++++++||.++.+ +++++.+.+.+ |+.
T Consensus 164 --~~~~~~~~~~~~~~P~lii~G~~D~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~--fl~ 238 (290)
T 3ksr_A 164 --GDNLALAACAQYKGDVLLVEAENDVIVPHP-VMRNYADAFTNARSLTSRVIAGADHALSVKEHQQEYTRALID--WLT 238 (290)
T ss_dssp --GGCHHHHHHHHCCSEEEEEEETTCSSSCHH-HHHHHHHHTTTSSEEEEEEETTCCTTCCSHHHHHHHHHHHHH--HHH
T ss_pred --ccccHHHHHHhcCCCeEEEEecCCcccChH-HHHHHHHHhccCCCceEEEcCCCCCCCCcchHHHHHHHHHHH--HHH
Confidence 000112345678899999999999999998 788999888765 499999999988654 88999999999 776
Q ss_pred cc
Q 013862 236 RG 237 (435)
Q Consensus 236 ~~ 237 (435)
+.
T Consensus 239 ~~ 240 (290)
T 3ksr_A 239 EM 240 (290)
T ss_dssp HH
T ss_pred HH
Confidence 44
|
| >1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=1.3e-14 Score=124.95 Aligned_cols=129 Identities=14% Similarity=0.106 Sum_probs=100.7
Q ss_pred CCChHHHHHHHHHHHHHhhhc-CCCCCEEEEEeChhHHHHHHHHH-hCCCceeEEEEecCCccccccccccccccccccc
Q 013862 12 GHHFTGLLKLIERTIRSENCR-SSNRPVYLVGESLGACLALAVAA-RNPDMDLVLILANPATSFRKSLLQTIMPIPAELM 89 (435)
Q Consensus 12 ~~s~~~~a~dl~~~l~~l~~~-~~~~~~~lvGhS~Gg~va~~~a~-~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~ 89 (435)
.+++++.++++.++++++... .+.++++++|||+||.+|+.+|. ++|++++++|++++.... . . +.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~--------~-~-~~-- 148 (218)
T 1auo_A 81 LEELEVSAKMVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPT--------F-G-DE-- 148 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTT--------C-C-TT--
T ss_pred hHHHHHHHHHHHHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCCCCccEEEEECCCCCC--------c-h-hh--
Confidence 356888899999999988321 12358999999999999999999 999999999999987421 0 0 00
Q ss_pred cchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhh
Q 013862 90 SGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANAR 169 (435)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (435)
. . + .
T Consensus 149 -~---------------------------~---------------------------~---------------------~ 152 (218)
T 1auo_A 149 -L---------------------------E---------------------------L---------------------S 152 (218)
T ss_dssp -C---------------------------C---------------------------C---------------------C
T ss_pred -h---------------------------h---------------------------h---------------------h
Confidence 0 0 0 0
Q ss_pred cccccceEEEEeeCCCCCCCChhHHHHHHhhCC----CceEEEeCCCCccccccCchhHHHHHhh
Q 013862 170 LDAVKAQTLILCSGRDQLLPSEEEGDRLCRALP----NCQTRRFGGGGHFLFLEDGVDLVTTIKG 230 (435)
Q Consensus 170 l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~----~~~~~~i~~~gH~~~~e~pe~~~~~I~~ 230 (435)
...+++|+++++|++|.+++.+ ..+.+.+.++ +.++++++ +||..+.+.++++.+.|.+
T Consensus 153 ~~~~~~P~l~i~G~~D~~~~~~-~~~~~~~~l~~~g~~~~~~~~~-~gH~~~~~~~~~~~~~l~~ 215 (218)
T 1auo_A 153 ASQQRIPALCLHGQYDDVVQNA-MGRSAFEHLKSRGVTVTWQEYP-MGHEVLPQEIHDIGAWLAA 215 (218)
T ss_dssp HHHHTCCEEEEEETTCSSSCHH-HHHHHHHHHHTTTCCEEEEEES-CSSSCCHHHHHHHHHHHHH
T ss_pred hcccCCCEEEEEeCCCceecHH-HHHHHHHHHHhCCCceEEEEec-CCCccCHHHHHHHHHHHHH
Confidence 0245789999999999999988 6888877776 48999999 9999999888887777766
|
| >1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16 | Back alignment and structure |
|---|
Probab=99.54 E-value=5e-14 Score=125.27 Aligned_cols=126 Identities=13% Similarity=0.149 Sum_probs=98.8
Q ss_pred ChHHHHHHHHHHHHHhhh------cCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccc
Q 013862 14 HFTGLLKLIERTIRSENC------RSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAE 87 (435)
Q Consensus 14 s~~~~a~dl~~~l~~l~~------~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~ 87 (435)
+.....+|+.+.++.+.. ....++++|+||||||.+++.+|.++|+ ++++|++++.. .
T Consensus 95 ~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~p~~--------------~- 158 (262)
T 1jfr_A 95 QPDSRGRQLLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTS-LKAAIPLTGWN--------------T- 158 (262)
T ss_dssp CHHHHHHHHHHHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCC--------------S-
T ss_pred CCchhHHHHHHHHHHHHhccccccccCcccEEEEEEChhHHHHHHHHhcCcc-ceEEEeecccC--------------c-
Confidence 334445555555555432 1123589999999999999999999998 99999987651 0
Q ss_pred cccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhh
Q 013862 88 LMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYAN 167 (435)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (435)
.
T Consensus 159 -------------------------------------------------------------------------------~ 159 (262)
T 1jfr_A 159 -------------------------------------------------------------------------------D 159 (262)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred -------------------------------------------------------------------------------c
Confidence 1
Q ss_pred hhcccccceEEEEeeCCCCCCCChhH-HHHHHhhCCC---ceEEEeCCCCccccccCchhHHHHHhhccccccc
Q 013862 168 ARLDAVKAQTLILCSGRDQLLPSEEE-GDRLCRALPN---CQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRRG 237 (435)
Q Consensus 168 ~~l~~i~~Pvlii~G~~D~~~~~~~~-~~~~~~~~~~---~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~~ 237 (435)
..+.++++|+|+++|++|.+++.+ . .+.+.+.+++ .++++++++||..+.++++++.+.+.+ |+++.
T Consensus 160 ~~~~~~~~P~l~i~G~~D~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~H~~~~~~~~~~~~~i~~--fl~~~ 230 (262)
T 1jfr_A 160 KTWPELRTPTLVVGADGDTVAPVA-THSKPFYESLPGSLDKAYLELRGASHFTPNTSDTTIAKYSIS--WLKRF 230 (262)
T ss_dssp CCCTTCCSCEEEEEETTCSSSCTT-TTHHHHHHHSCTTSCEEEEEETTCCTTGGGSCCHHHHHHHHH--HHHHH
T ss_pred ccccccCCCEEEEecCccccCCch-hhHHHHHHHhhcCCCceEEEeCCCCcCCcccchHHHHHHHHH--HHHHH
Confidence 234567899999999999999998 6 8888888765 389999999999999999999999999 77544
|
| >1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A | Back alignment and structure |
|---|
Probab=99.54 E-value=5e-14 Score=127.99 Aligned_cols=164 Identities=19% Similarity=0.201 Sum_probs=101.5
Q ss_pred CCChHHHHHHHHH-HHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCC---CceeEEEEecCCccccccccccccccccc
Q 013862 12 GHHFTGLLKLIER-TIRSENCRSSNRPVYLVGESLGACLALAVAARNP---DMDLVLILANPATSFRKSLLQTIMPIPAE 87 (435)
Q Consensus 12 ~~s~~~~a~dl~~-~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p---~~v~~lVli~~~~~~~~~~~~~~~~~~~~ 87 (435)
.++++++++++.+ +++.++. ++++|+||||||.+|+.+|.++| ++|+++|++++.......
T Consensus 113 ~~~~~~~a~~~~~~l~~~~~~----~~~~LvGhS~GG~vA~~~A~~~p~~g~~v~~lvl~~~~~~~~~~----------- 177 (300)
T 1kez_A 113 PSSMAAVAAVQADAVIRTQGD----KPFVVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQD----------- 177 (300)
T ss_dssp CSSHHHHHHHHHHHHHHHCSS----CCEEEECCTHHHHHHHHHHHHTTTTTCCCSEEECBTCCCTTTCH-----------
T ss_pred CCCHHHHHHHHHHHHHHhcCC----CCEEEEEECHhHHHHHHHHHHHHhcCCCccEEEEECCCCCcchh-----------
Confidence 4799999999885 5555554 58999999999999999999998 489999999987432110
Q ss_pred cccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhh
Q 013862 88 LMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYAN 167 (435)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (435)
.................. ....... ... .......+ ..
T Consensus 178 ----~~~~~~~~~~~~~~~~~~---------~~~~~~~----~~~-------------------~~~~~~~~------~~ 215 (300)
T 1kez_A 178 ----AMNAWLEELTATLFDRET---------VRMDDTR----LTA-------------------LGAYDRLT------GQ 215 (300)
T ss_dssp ----HHHHHHHHHHGGGCCCCS---------SCCCHHH----HHH-------------------HHHHHHHT------TT
T ss_pred ----HHHHHHHHHHHHHHhCcC---------CccchHH----HHH-------------------HHHHHHHH------hc
Confidence 000000111111000000 0000000 000 00000000 01
Q ss_pred hhcccccceEEEEeeCCCCCCCChhHHHHHHhhCC-CceEEEeCCCCccccc-cCchhHHHHHhhcccccccc
Q 013862 168 ARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALP-NCQTRRFGGGGHFLFL-EDGVDLVTTIKGAGYYRRGR 238 (435)
Q Consensus 168 ~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~-e~pe~~~~~I~~~~Fl~~~~ 238 (435)
.....+++|+++|+|+ |..+++. . ..+.+..+ +.+++++++ ||+.++ |+|+++++.|.+ |+.+..
T Consensus 216 ~~~~~i~~P~lii~G~-d~~~~~~-~-~~~~~~~~~~~~~~~i~g-gH~~~~~e~~~~~~~~i~~--fl~~~~ 282 (300)
T 1kez_A 216 WRPRETGLPTLLVSAG-EPMGPWP-D-DSWKPTWPFEHDTVAVPG-DHFTMVQEHADAIARHIDA--WLGGGN 282 (300)
T ss_dssp CCCCCCSCCBEEEEES-SCSSCCC-S-SCCSCCCSSCCEEEEESS-CTTTSSSSCSHHHHHHHHH--HHTCC-
T ss_pred CCCCCCCCCEEEEEeC-CCCCCCc-c-cchhhhcCCCCeEEEecC-CChhhccccHHHHHHHHHH--HHHhcc
Confidence 1346789999999995 5556655 2 34555555 469999998 999997 899999999999 886543
|
| >2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.52 E-value=4.5e-14 Score=124.65 Aligned_cols=123 Identities=19% Similarity=0.189 Sum_probs=94.4
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccccchhHH
Q 013862 16 TGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTL 95 (435)
Q Consensus 16 ~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (435)
.+.++|+.++++.+......++++|+||||||.+++.+|.++|++++++|++++.... ..
T Consensus 121 ~~~~~~~~~~l~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~-------------~~------- 180 (251)
T 2r8b_A 121 ERATGKMADFIKANREHYQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPF-------------EP------- 180 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCS-------------CC-------
T ss_pred HHHHHHHHHHHHHHHhccCCCcEEEEEECHHHHHHHHHHHhCCcccCeEEEEecCCCc-------------cc-------
Confidence 3345666666666532223468999999999999999999999999999999987421 00
Q ss_pred HHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhcccccc
Q 013862 96 TLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARLDAVKA 175 (435)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 175 (435)
......+++
T Consensus 181 -----------------------------------------------------------------------~~~~~~~~~ 189 (251)
T 2r8b_A 181 -----------------------------------------------------------------------KISPAKPTR 189 (251)
T ss_dssp -----------------------------------------------------------------------CCCCCCTTC
T ss_pred -----------------------------------------------------------------------cccccccCC
Confidence 001123578
Q ss_pred eEEEEeeCCCCCCCChhHHHHHHhhCC--CceEE-EeCCCCccccccCchhHHHHHhh
Q 013862 176 QTLILCSGRDQLLPSEEEGDRLCRALP--NCQTR-RFGGGGHFLFLEDGVDLVTTIKG 230 (435)
Q Consensus 176 Pvlii~G~~D~~~~~~~~~~~~~~~~~--~~~~~-~i~~~gH~~~~e~pe~~~~~I~~ 230 (435)
|+++++|++|.+++.+ ..+.+.+.++ +.++. .++++||.++.+.++++.+.|.+
T Consensus 190 P~li~~g~~D~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~gH~~~~~~~~~~~~~l~~ 246 (251)
T 2r8b_A 190 RVLITAGERDPICPVQ-LTKALEESLKAQGGTVETVWHPGGHEIRSGEIDAVRGFLAA 246 (251)
T ss_dssp EEEEEEETTCTTSCHH-HHHHHHHHHHHHSSEEEEEEESSCSSCCHHHHHHHHHHHGG
T ss_pred cEEEeccCCCccCCHH-HHHHHHHHHHHcCCeEEEEecCCCCccCHHHHHHHHHHHHH
Confidence 9999999999999988 6888888887 56665 78889999998888888777776
|
| >2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.52 E-value=1.4e-13 Score=118.70 Aligned_cols=124 Identities=20% Similarity=0.205 Sum_probs=101.4
Q ss_pred hHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccccchhH
Q 013862 15 FTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMT 94 (435)
Q Consensus 15 ~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (435)
.+..++|+.++++.+....+.++++++|||+||.+++.++.++ +++++|++++..... .
T Consensus 90 ~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~v~~~v~~~~~~~~~-------------~------ 148 (220)
T 2fuk_A 90 GDGEQDDLRAVAEWVRAQRPTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGRW-------------D------ 148 (220)
T ss_dssp TTHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTTB-------------C------
T ss_pred CchhHHHHHHHHHHHHhcCCCCcEEEEEECHHHHHHHHHHhhc--cccEEEEecccccch-------------h------
Confidence 3578889999999887765556899999999999999999988 899999999884210 0
Q ss_pred HHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhccccc
Q 013862 95 LTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARLDAVK 174 (435)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 174 (435)
. +.+. ..
T Consensus 149 ----------------------------------------------------~--------------------~~~~-~~ 155 (220)
T 2fuk_A 149 ----------------------------------------------------F--------------------SDVQ-PP 155 (220)
T ss_dssp ----------------------------------------------------C--------------------TTCC-CC
T ss_pred ----------------------------------------------------h--------------------hhcc-cC
Confidence 0 0011 15
Q ss_pred ceEEEEeeCCCCCCCChhHHHHHHhhC-CCceEEEeCCCCccccccCchhHHHHHhhcccccc
Q 013862 175 AQTLILCSGRDQLLPSEEEGDRLCRAL-PNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 175 ~Pvlii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~ 236 (435)
+|+++++|++|.+++.+ ..+.+.+.+ ++.++++++++||..+.+ ++++.+.+.+ |+.+
T Consensus 156 ~p~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~H~~~~~-~~~~~~~i~~--~l~~ 214 (220)
T 2fuk_A 156 AQWLVIQGDADEIVDPQ-AVYDWLETLEQQPTLVRMPDTSHFFHRK-LIDLRGALQH--GVRR 214 (220)
T ss_dssp SSEEEEEETTCSSSCHH-HHHHHHTTCSSCCEEEEETTCCTTCTTC-HHHHHHHHHH--HHGG
T ss_pred CcEEEEECCCCcccCHH-HHHHHHHHhCcCCcEEEeCCCCceehhh-HHHHHHHHHH--HHHH
Confidence 78999999999999998 688898888 889999999999998884 8888999988 7654
|
| >1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32 | Back alignment and structure |
|---|
Probab=99.52 E-value=1.2e-13 Score=123.63 Aligned_cols=60 Identities=15% Similarity=0.044 Sum_probs=51.5
Q ss_pred ccccceEEEEeeCCCCCCCChhHHHHHHhhCC----CceEEEeCCCCccccccCchhHHHHHhhcccc
Q 013862 171 DAVKAQTLILCSGRDQLLPSEEEGDRLCRALP----NCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYY 234 (435)
Q Consensus 171 ~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~----~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl 234 (435)
..+++|+|+++|++|.++|.+ ..+.+.+.++ ++++++++++||..++++ +++.+.|.+ |+
T Consensus 209 ~~~~~P~lii~G~~D~~vp~~-~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~-~~~~~~i~~--fl 272 (273)
T 1vkh_A 209 SRFSIDMHLVHSYSDELLTLR-QTNCLISCLQDYQLSFKLYLDDLGLHNDVYKN-GKVAKYIFD--NI 272 (273)
T ss_dssp HHHTCEEEEEEETTCSSCCTH-HHHHHHHHHHHTTCCEEEEEECCCSGGGGGGC-HHHHHHHHH--TC
T ss_pred cccCCCEEEEecCCcCCCChH-HHHHHHHHHHhcCCceEEEEeCCCcccccccC-hHHHHHHHH--Hc
Confidence 347899999999999999998 6777777654 479999999999999998 889999988 65
|
| >3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=6.5e-14 Score=121.51 Aligned_cols=128 Identities=16% Similarity=0.133 Sum_probs=98.9
Q ss_pred CCChHHHHHHHHHHHHHhhhc-CCCCCEEEEEeChhHHHHHHHHH-hCCCceeEEEEecCCccccccccccccccccccc
Q 013862 12 GHHFTGLLKLIERTIRSENCR-SSNRPVYLVGESLGACLALAVAA-RNPDMDLVLILANPATSFRKSLLQTIMPIPAELM 89 (435)
Q Consensus 12 ~~s~~~~a~dl~~~l~~l~~~-~~~~~~~lvGhS~Gg~va~~~a~-~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~ 89 (435)
.++++++++++.++++.+... .+.++++|+||||||.+|+.+|. ++|++++++|++++....... .
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~~---------~--- 158 (226)
T 3cn9_A 91 EDQLNASADQVIALIDEQRAKGIAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPTFDD---------L--- 158 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHTCSSCCSEEEEESCCCGGGGG---------C---
T ss_pred chhHHHHHHHHHHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCccCcceEEEecCcCCCchh---------h---
Confidence 467889999999999988321 11358999999999999999999 999999999999986321000 0
Q ss_pred cchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhh
Q 013862 90 SGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANAR 169 (435)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (435)
. + .
T Consensus 159 ------------------------------------------~--------------~---------------------~ 161 (226)
T 3cn9_A 159 ------------------------------------------A--------------L---------------------D 161 (226)
T ss_dssp ------------------------------------------C--------------C---------------------C
T ss_pred ------------------------------------------h--------------h---------------------c
Confidence 0 0 0
Q ss_pred cccccceEEEEeeCCCCCCCChhHHHHHHhhCC----CceEEEeCCCCccccccCchhHHHHHhh
Q 013862 170 LDAVKAQTLILCSGRDQLLPSEEEGDRLCRALP----NCQTRRFGGGGHFLFLEDGVDLVTTIKG 230 (435)
Q Consensus 170 l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~----~~~~~~i~~~gH~~~~e~pe~~~~~I~~ 230 (435)
...+++|+++++|++|.+++.+ ..+.+.+.++ +.++++++ +||..+.+.++++.+.|.+
T Consensus 162 ~~~~~~P~lii~G~~D~~~~~~-~~~~~~~~l~~~g~~~~~~~~~-~gH~~~~~~~~~i~~~l~~ 224 (226)
T 3cn9_A 162 ERHKRIPVLHLHGSQDDVVDPA-LGRAAHDALQAQGVEVGWHDYP-MGHEVSLEEIHDIGAWLRK 224 (226)
T ss_dssp TGGGGCCEEEEEETTCSSSCHH-HHHHHHHHHHHTTCCEEEEEES-CCSSCCHHHHHHHHHHHHH
T ss_pred ccccCCCEEEEecCCCCccCHH-HHHHHHHHHHHcCCceeEEEec-CCCCcchhhHHHHHHHHHh
Confidence 0346789999999999999988 6787777766 58999999 9999988877766665554
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} | Back alignment and structure |
|---|
Probab=99.49 E-value=5e-13 Score=123.96 Aligned_cols=167 Identities=14% Similarity=0.074 Sum_probs=105.0
Q ss_pred CCChHHHHHHHHHHHHHhhhcC--CCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccc
Q 013862 12 GHHFTGLLKLIERTIRSENCRS--SNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELM 89 (435)
Q Consensus 12 ~~s~~~~a~dl~~~l~~l~~~~--~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~ 89 (435)
.+++.+..+|+.+.++.+.... ..++++++|||+||.+|+.+|.++|+ |+++|+++|.......... ...
T Consensus 174 ~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~-v~~~vl~~p~~~~~~~~~~-------~~~ 245 (346)
T 3fcy_A 174 NMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEPR-VRKVVSEYPFLSDYKRVWD-------LDL 245 (346)
T ss_dssp GCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTT-CCEEEEESCSSCCHHHHHH-------TTC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHHHHHhCcc-ccEEEECCCcccCHHHHhh-------ccc
Confidence 3456777888888888775432 12589999999999999999999998 9999999886421111000 000
Q ss_pred cchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhh
Q 013862 90 SGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANAR 169 (435)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (435)
.......+.......... . ......... + ...+....
T Consensus 246 ~~~~~~~~~~~~~~~~~~-----------~----~~~~~~~~~--------------------------~--~~~d~~~~ 282 (346)
T 3fcy_A 246 AKNAYQEITDYFRLFDPR-----------H----ERENEVFTK--------------------------L--GYIDVKNL 282 (346)
T ss_dssp CCGGGHHHHHHHHHHCTT-----------C----TTHHHHHHH--------------------------H--GGGCHHHH
T ss_pred cccchHHHHHHHHhcCCC-----------c----chHHHHHHH--------------------------h--CcccHHHH
Confidence 000000111111000000 0 000000000 0 00012345
Q ss_pred cccccceEEEEeeCCCCCCCChhHHHHHHhhCC-CceEEEeCCCCccccccCchhHHHHHhhcccccc
Q 013862 170 LDAVKAQTLILCSGRDQLLPSEEEGDRLCRALP-NCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 170 l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~ 236 (435)
+.++++|+|+++|++|.++++. ....+.+.++ +.++++++++||..+ +++.+.+.+ |+++
T Consensus 283 ~~~i~~P~lii~G~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~----~~~~~~i~~--fl~~ 343 (346)
T 3fcy_A 283 AKRIKGDVLMCVGLMDQVCPPS-TVFAAYNNIQSKKDIKVYPDYGHEPM----RGFGDLAMQ--FMLE 343 (346)
T ss_dssp GGGCCSEEEEEEETTCSSSCHH-HHHHHHTTCCSSEEEEEETTCCSSCC----TTHHHHHHH--HHHT
T ss_pred HHhcCCCEEEEeeCCCCcCCHH-HHHHHHHhcCCCcEEEEeCCCCCcCH----HHHHHHHHH--HHHH
Confidence 6778999999999999999998 6888888887 689999999999998 567777777 6654
|
| >1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=3.4e-13 Score=117.56 Aligned_cols=130 Identities=20% Similarity=0.189 Sum_probs=102.2
Q ss_pred CCChHHHHHHHHHHHHHhhhcCC-CCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccccccccccccccccc
Q 013862 12 GHHFTGLLKLIERTIRSENCRSS-NRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMS 90 (435)
Q Consensus 12 ~~s~~~~a~dl~~~l~~l~~~~~-~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~ 90 (435)
.++.++.++|+.++++.+..... +++++++||||||.+++.+|.++| +++++++.+.. ..
T Consensus 90 ~~~~~~~~~d~~~~~~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~--------------~~--- 150 (236)
T 1zi8_A 90 AFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYSLGGALAFLVASKGY--VDRAVGYYGVG--------------LE--- 150 (236)
T ss_dssp HCCHHHHHHHHHHHHHHHTSSTTEEEEEEEEEETHHHHHHHHHHHHTC--SSEEEEESCSS--------------GG---
T ss_pred ccCcchhhHHHHHHHHHHHhccCCCCCEEEEEECcCHHHHHHHhccCC--ccEEEEecCcc--------------cc---
Confidence 35788889999999999975432 358999999999999999999998 88888776541 00
Q ss_pred chhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhc
Q 013862 91 GQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARL 170 (435)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 170 (435)
.....+
T Consensus 151 --------------------------------------------------------------------------~~~~~~ 156 (236)
T 1zi8_A 151 --------------------------------------------------------------------------KQLNKV 156 (236)
T ss_dssp --------------------------------------------------------------------------GCGGGG
T ss_pred --------------------------------------------------------------------------cchhhh
Confidence 001335
Q ss_pred ccccceEEEEeeCCCCCCCChhHHHHHHhhC---CCceEEEeCCCCccccccCc--------hhHHHHHhhccccccc
Q 013862 171 DAVKAQTLILCSGRDQLLPSEEEGDRLCRAL---PNCQTRRFGGGGHFLFLEDG--------VDLVTTIKGAGYYRRG 237 (435)
Q Consensus 171 ~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~---~~~~~~~i~~~gH~~~~e~p--------e~~~~~I~~~~Fl~~~ 237 (435)
.++++|+++++|++|.+++.+ ..+.+.+.+ ++.++++++++||....+.+ +++.+.+.+ |+++.
T Consensus 157 ~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~i~~--fl~~~ 231 (236)
T 1zi8_A 157 PEVKHPALFHMGGQDHFVPAP-SRQLITEGFGANPLLQVHWYEEAGHSFARTGSSGYVASAAALANERTLD--FLVPL 231 (236)
T ss_dssp GGCCSCEEEEEETTCTTSCHH-HHHHHHHHHTTCTTEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHH--HHGGG
T ss_pred hhcCCCEEEEecCCCCCCCHH-HHHHHHHHHHhCCCceEEEECCCCcccccCCCCccCHHHHHHHHHHHHH--HHHHh
Confidence 567899999999999999988 688777766 57899999999998887765 457777877 77543
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 | Back alignment and structure |
|---|
Probab=99.48 E-value=8.1e-13 Score=124.48 Aligned_cols=173 Identities=14% Similarity=0.041 Sum_probs=110.9
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
+|.|.......+++++.+.++.+++.+.... ..++++|+|||+||.+++.+|.+ |++++++|++ +.......
T Consensus 190 ~G~s~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~i~l~G~S~GG~la~~~a~~-~~~~~a~v~~-~~~~~~~~----- 261 (386)
T 2jbw_A 190 QGEMFEYKRIAGDYEKYTSAVVDLLTKLEAI-RNDAIGVLGRSLGGNYALKSAAC-EPRLAACISW-GGFSDLDY----- 261 (386)
T ss_dssp SGGGTTTCCSCSCHHHHHHHHHHHHHHCTTE-EEEEEEEEEETHHHHHHHHHHHH-CTTCCEEEEE-SCCSCSTT-----
T ss_pred CCCCCCCCCCCccHHHHHHHHHHHHHhCCCc-CcccEEEEEEChHHHHHHHHHcC-CcceeEEEEe-ccCChHHH-----
Confidence 3444223344578888888888888873211 11489999999999999999999 8999999999 66432111
Q ss_pred cccccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhh
Q 013862 82 MPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKS 161 (435)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (435)
...... ............ ..+.+... .. +.
T Consensus 262 ----~~~~~~----~~~~~~~~~~g~------------~~~~~~~~---~~--------------------------~~- 291 (386)
T 2jbw_A 262 ----WDLETP----LTKESWKYVSKV------------DTLEEARL---HV--------------------------HA- 291 (386)
T ss_dssp ----GGGSCH----HHHHHHHHHTTC------------SSHHHHHH---HH--------------------------HH-
T ss_pred ----HHhccH----HHHHHHHHHhCC------------CCHHHHHH---HH--------------------------HH-
Confidence 110000 000000000000 00000000 00 00
Q ss_pred hhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhC-C-CceEEEeCCCCccccccCchhHHHHHhhcccccccc
Q 013862 162 ASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRAL-P-NCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRRGR 238 (435)
Q Consensus 162 ~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~-~-~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~~~ 238 (435)
.......+.++++|+|+++|++|. ++.. ..+.+.+.+ + +.++++++++||.. .++++++.+.|.+ ||.+.-
T Consensus 292 -~~~~~~~~~~i~~P~Lii~G~~D~-v~~~-~~~~l~~~l~~~~~~~~~~~~~gH~~-~~~~~~~~~~i~~--fl~~~l 364 (386)
T 2jbw_A 292 -ALETRDVLSQIACPTYILHGVHDE-VPLS-FVDTVLELVPAEHLNLVVEKDGDHCC-HNLGIRPRLEMAD--WLYDVL 364 (386)
T ss_dssp -HTCCTTTGGGCCSCEEEEEETTSS-SCTH-HHHHHHHHSCGGGEEEEEETTCCGGG-GGGTTHHHHHHHH--HHHHHH
T ss_pred -hCChhhhhcccCCCEEEEECCCCC-CCHH-HHHHHHHHhcCCCcEEEEeCCCCcCC-ccchHHHHHHHHH--HHHHhc
Confidence 001124567789999999999999 8888 799999888 7 78999999999965 6789999999999 776543
|
| >3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A | Back alignment and structure |
|---|
Probab=99.48 E-value=6.9e-13 Score=119.32 Aligned_cols=207 Identities=12% Similarity=0.128 Sum_probs=102.0
Q ss_pred CCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhC---CCcee---EEEEecCCcccccccccccccc
Q 013862 11 IGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARN---PDMDL---VLILANPATSFRKSLLQTIMPI 84 (435)
Q Consensus 11 ~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~---p~~v~---~lVli~~~~~~~~~~~~~~~~~ 84 (435)
..++++++++++.+.++.+.. .++++|+||||||.+|+.+|.++ |+++. ++|++++...+...........
T Consensus 61 ~~~~~~~~a~~~~~~i~~~~~---~~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~~~~lvlid~~~~~~~~~~~~~~~~ 137 (283)
T 3tjm_A 61 PLDSIHSLAAYYIDCIRQVQP---EGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGSPTYVLAYTGSYRAK 137 (283)
T ss_dssp CCSCHHHHHHHHHHHHTTTCC---SSCCEEEEETHHHHHHHHHHHHHHHHHTTSCCCCEEEEESCCTTHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHHhCC---CCCEEEEEECHhHHHHHHHHHHHHHcCCCCCccceEEEEcCCchhhhhhhhhhhhc
Confidence 357999999999999988754 25899999999999999999876 88899 9999998754321110000000
Q ss_pred cc-ccc-cchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhh
Q 013862 85 PA-ELM-SGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSA 162 (435)
Q Consensus 85 ~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (435)
. ... .......+..+.......................+............ ...............++..
T Consensus 138 -~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~ 209 (283)
T 3tjm_A 138 -LTPGCEAEAETEAICFFVQQFTDMEHNRVLEALLPLKGLEERVAAAVDLIIKS-------HQGLDRQELSFAARSFYYK 209 (283)
T ss_dssp -SCTTCHHHHHHHHHHHHHHHHSCCCHHHHHHHHTTSSSHHHHHHHHHHHHHHH-------CTTSCHHHHHHHHHHHHHH
T ss_pred -cCCCCchHHHHHHHHHHHHHhcccchhHHHHHHhcCCCHHHHHHHHHHHHHhh-------ccCCCHHHHHHHHHHHHHH
Confidence 0 000 00011111111111111111111111111011111111111111100 0011111111111111111
Q ss_pred hhhhh--hhcccccceEEEEeeCCCCCC--CChhHHHHHHhhCCC-ceEEEeCCCCccccccCch--hHHHHHhh
Q 013862 163 SAYAN--ARLDAVKAQTLILCSGRDQLL--PSEEEGDRLCRALPN-CQTRRFGGGGHFLFLEDGV--DLVTTIKG 230 (435)
Q Consensus 163 ~~~~~--~~l~~i~~Pvlii~G~~D~~~--~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~pe--~~~~~I~~ 230 (435)
..... ....++++|+++++|++|... +.. ....+.+..++ .+++.++ +||+.++++|+ ++++.|.+
T Consensus 210 ~~~~~~y~~~~~~~~Pvl~l~g~~d~~~~~~~~-~~~~w~~~~~~~~~~~~v~-ggH~~~l~~p~~~~va~~i~~ 282 (283)
T 3tjm_A 210 LRAAEQYTPKAKYHGNVMLLRAKTGGAYGEAAG-ADYNLSQVCDGKVSVHVIE-GDHATLLEGSGLESIISIIHS 282 (283)
T ss_dssp HHHHHHCCCSSCBCSCEEEEEC--------CCT-TTTTGGGTBCSCEEEEECS-SCTTGGGSHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCCCCCCEEEEecCCccccccccC-cccchHhhccCceEEEEEC-CCCceeeCCchHHHHHHHHhc
Confidence 11000 111478999999999999863 333 24456666554 6888998 59999999886 77777654
|
| >1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=1.3e-13 Score=126.83 Aligned_cols=120 Identities=13% Similarity=0.162 Sum_probs=97.8
Q ss_pred HHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccccchhHHHH
Q 013862 18 LLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTLTL 97 (435)
Q Consensus 18 ~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (435)
+++++.++++.+ ++++|+||||||.+++.+|.++|++|+++|+++|...
T Consensus 186 ~~~~l~~l~~~~------~~~~lvGhS~GG~~a~~~a~~~p~~v~~~v~~~p~~~------------------------- 234 (328)
T 1qlw_A 186 TVANLSKLAIKL------DGTVLLSHSQSGIYPFQTAAMNPKGITAIVSVEPGEC------------------------- 234 (328)
T ss_dssp HHHHHHHHHHHH------TSEEEEEEGGGTTHHHHHHHHCCTTEEEEEEESCSCC-------------------------
T ss_pred HHHHHHHHHHHh------CCceEEEECcccHHHHHHHHhChhheeEEEEeCCCCC-------------------------
Confidence 788888888876 3799999999999999999999999999999987620
Q ss_pred HHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhcccccceE
Q 013862 98 SYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARLDAVKAQT 177 (435)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv 177 (435)
... ......+++|+
T Consensus 235 -------------------------------------------------~~~-----------------~~~~~~~~~Pv 248 (328)
T 1qlw_A 235 -------------------------------------------------PKP-----------------EDVKPLTSIPV 248 (328)
T ss_dssp -------------------------------------------------CCG-----------------GGCGGGTTSCE
T ss_pred -------------------------------------------------CCH-----------------HHHhhccCCCE
Confidence 000 01112346899
Q ss_pred EEEeeCCCCCCCC-----hhHHHHHHhhCC----CceEEEeCCCC-----ccccccC-chhHHHHHhhccccccc
Q 013862 178 LILCSGRDQLLPS-----EEEGDRLCRALP----NCQTRRFGGGG-----HFLFLED-GVDLVTTIKGAGYYRRG 237 (435)
Q Consensus 178 lii~G~~D~~~~~-----~~~~~~~~~~~~----~~~~~~i~~~g-----H~~~~e~-pe~~~~~I~~~~Fl~~~ 237 (435)
|+++|++|..++. + ..+.+.+.++ ++++++++++| |+++.|. ++++.+.|.+ |+.+.
T Consensus 249 Lii~G~~D~~~p~~~~~~~-~~~~~~~~l~~~g~~~~~~~~~~~gi~G~~H~~~~~~~~~~~~~~i~~--fl~~~ 320 (328)
T 1qlw_A 249 LVVFGDHIEEFPRWAPRLK-ACHAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQVADLILD--WIGRN 320 (328)
T ss_dssp EEEECSSCTTCTTTHHHHH-HHHHHHHHHHHTTCCEEEEEGGGGTCCCCCTTGGGSTTHHHHHHHHHH--HHHHT
T ss_pred EEEeccCCccccchhhHHH-HHHHHHHHHHHhCCCceEEEcCCCCcCCCcccchhccCHHHHHHHHHH--HHHhc
Confidence 9999999999997 6 5777777765 78999999666 9999998 9999999999 88654
|
| >3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.47 E-value=1e-13 Score=121.33 Aligned_cols=131 Identities=15% Similarity=0.059 Sum_probs=94.3
Q ss_pred CCChHHHHHHHHHHHHHhhhc-CCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccccccccccccccccc
Q 013862 12 GHHFTGLLKLIERTIRSENCR-SSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMS 90 (435)
Q Consensus 12 ~~s~~~~a~dl~~~l~~l~~~-~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~ 90 (435)
..+++++++++..++++.... .+.++++|+||||||.+|+.+|.++|++++++|++++.......
T Consensus 93 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~-------------- 158 (239)
T 3u0v_A 93 LESIDVMCQVLTDLIDEEVKSGIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKASA-------------- 158 (239)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHHCTTSSEEEEESCCCCTTCH--------------
T ss_pred hhhHHHHHHHHHHHHHHHHHhCCCcccEEEEEEChhhHHHHHHHHhCccccceEEEecCCCCchhH--------------
Confidence 357888899999999875321 12368999999999999999999999999999999877421100
Q ss_pred chhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhc
Q 013862 91 GQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARL 170 (435)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 170 (435)
. .... ..
T Consensus 159 --~------------------------------------~~~~-----------------------------------~~ 165 (239)
T 3u0v_A 159 --V------------------------------------YQAL-----------------------------------QK 165 (239)
T ss_dssp --H------------------------------------HHHH-----------------------------------HH
T ss_pred --H------------------------------------HHHH-----------------------------------Hh
Confidence 0 0000 01
Q ss_pred ccccce-EEEEeeCCCCCCCChhHHHHHHhhCC----CceEEEeCCCCccccccCchhHHHHHhh
Q 013862 171 DAVKAQ-TLILCSGRDQLLPSEEEGDRLCRALP----NCQTRRFGGGGHFLFLEDGVDLVTTIKG 230 (435)
Q Consensus 171 ~~i~~P-vlii~G~~D~~~~~~~~~~~~~~~~~----~~~~~~i~~~gH~~~~e~pe~~~~~I~~ 230 (435)
....+| +++++|++|.+++.+ ..+.+.+.++ +.++++++++||....+..+++.+.|.+
T Consensus 166 ~~~~~pp~li~~G~~D~~v~~~-~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~ 229 (239)
T 3u0v_A 166 SNGVLPELFQCHGTADELVLHS-WAEETNSMLKSLGVTTKFHSFPNVYHELSKTELDILKLWILT 229 (239)
T ss_dssp CCSCCCCEEEEEETTCSSSCHH-HHHHHHHHHHHTTCCEEEEEETTCCSSCCHHHHHHHHHHHHH
T ss_pred hccCCCCEEEEeeCCCCccCHH-HHHHHHHHHHHcCCcEEEEEeCCCCCcCCHHHHHHHHHHHHH
Confidence 123556 999999999999987 5666655543 6799999999999985555555555544
|
| >2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A | Back alignment and structure |
|---|
Probab=99.47 E-value=5.2e-14 Score=123.60 Aligned_cols=63 Identities=13% Similarity=0.242 Sum_probs=54.3
Q ss_pred cccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhccccccc
Q 013862 170 LDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRRG 237 (435)
Q Consensus 170 l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~~ 237 (435)
+.++++|+|+++|++|..++ . ..+.+.+..++.++++++ +||+++.|+|+++++.|.+ |+.+.
T Consensus 175 l~~i~~P~lvi~G~~D~~~~-~-~~~~~~~~~~~~~~~~~~-~gH~~~~e~p~~~~~~i~~--fl~~~ 237 (242)
T 2k2q_B 175 LAQIQSPVHVFNGLDDKKCI-R-DAEGWKKWAKDITFHQFD-GGHMFLLSQTEEVAERIFA--ILNQH 237 (242)
T ss_dssp CTTCCCSEEEEEECSSCCHH-H-HHHHHHTTCCCSEEEEEE-CCCSHHHHHCHHHHHHHHH--HHHTT
T ss_pred CCccCCCEEEEeeCCCCcCH-H-HHHHHHHHhcCCeEEEEe-CCceeEcCCHHHHHHHHHH--Hhhcc
Confidence 67899999999999999865 3 466777888888888898 5999999999999999999 88654
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.46 E-value=6.4e-14 Score=132.92 Aligned_cols=182 Identities=8% Similarity=0.083 Sum_probs=106.5
Q ss_pred HHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccccchhHHH
Q 013862 17 GLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTLT 96 (435)
Q Consensus 17 ~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (435)
++.+|+.++++.+.... ++++|+||||||.+++.+|.++| +|+++|+++|............... ...+...
T Consensus 211 ~~~~d~~~~~~~l~~~~--~~v~l~G~S~GG~~a~~~a~~~p-~v~~~v~~~p~~~~~~~~~~~~~~~--~~~p~~~--- 282 (405)
T 3fnb_A 211 DARAAISAILDWYQAPT--EKIAIAGFSGGGYFTAQAVEKDK-RIKAWIASTPIYDVAEVFRISFSTA--LKAPKTI--- 282 (405)
T ss_dssp CTHHHHHHHHHHCCCSS--SCEEEEEETTHHHHHHHHHTTCT-TCCEEEEESCCSCHHHHHHHHCC--------------
T ss_pred cHHHHHHHHHHHHHhcC--CCEEEEEEChhHHHHHHHHhcCc-CeEEEEEecCcCCHHHHHHHhhhhh--hhCcHHH---
Confidence 55888999999887632 58999999999999999999999 9999999998864322111000000 0000000
Q ss_pred HHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhcccccce
Q 013862 97 LSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARLDAVKAQ 176 (435)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 176 (435)
........ ... ............. . ............+. .......+.++++|
T Consensus 283 ~~~~~~~~-------------~~~--~~~~~~~~~~~~~------~----~~~~~~~~~~~~~~--~~~~~~~l~~i~~P 335 (405)
T 3fnb_A 283 LKWGSKLV-------------TSV--NKVAEVNLNKYAW------Q----FGQVDFITSVNEVL--EQAQIVDYNKIDVP 335 (405)
T ss_dssp ----------------------CC--CHHHHHHHHHHHH------H----HTSSSHHHHHHHHH--HHCCCCCGGGCCSC
T ss_pred HHHHHHHh-------------hcc--chhHHHHHHHhhh------h----cCCCCHHHHHHHHH--HhhcccCHhhCCCC
Confidence 00000000 000 0000000000000 0 00000000000000 00111236789999
Q ss_pred EEEEeeCCCCCCCChhHHHHHHhhCC----CceEEEe---CCCCccccccCchhHHHHHhhcccccc
Q 013862 177 TLILCSGRDQLLPSEEEGDRLCRALP----NCQTRRF---GGGGHFLFLEDGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 177 vlii~G~~D~~~~~~~~~~~~~~~~~----~~~~~~i---~~~gH~~~~e~pe~~~~~I~~~~Fl~~ 236 (435)
+|+++|++|..++.+ ..+.+.+.++ +.+++++ +++||+++.++|+.+.+.|.+ ||.+
T Consensus 336 vLii~G~~D~~v~~~-~~~~l~~~l~~~~~~~~l~~~~~~~h~gh~~~~~~~~~~~~~i~~--fL~~ 399 (405)
T 3fnb_A 336 SLFLVGAGEDSELMR-QSQVLYDNFKQRGIDVTLRKFSSESGADAHCQVNNFRLMHYQVFE--WLNH 399 (405)
T ss_dssp EEEEEETTSCHHHHH-HHHHHHHHHHHTTCCEEEEEECTTTTCCSGGGGGGHHHHHHHHHH--HHHH
T ss_pred EEEEecCCCcCCChH-HHHHHHHHhccCCCCceEEEEcCCccchhccccchHHHHHHHHHH--HHHH
Confidence 999999999998888 6777777664 4579999 777889999999999999999 7754
|
| >3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP} | Back alignment and structure |
|---|
Probab=99.46 E-value=4.3e-13 Score=122.75 Aligned_cols=169 Identities=20% Similarity=0.200 Sum_probs=102.8
Q ss_pred CChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhC---CCceeEEEEecCCccccccccccccccccccc
Q 013862 13 HHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARN---PDMDLVLILANPATSFRKSLLQTIMPIPAELM 89 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~---p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~ 89 (435)
.+++++++++.+.++.+.. .++++|+||||||.+|+.+|.++ |++|+++|++++.......
T Consensus 128 ~~~~~~~~~~~~~l~~~~~---~~~~~lvGhS~Gg~vA~~~A~~~~~~~~~v~~lvl~~~~~~~~~~------------- 191 (319)
T 3lcr_A 128 ATLTVLVRSLADVVQAEVA---DGEFALAGHSSGGVVAYEVARELEARGLAPRGVVLIDSYSFDGDG------------- 191 (319)
T ss_dssp SSHHHHHHHHHHHHHHHHT---TSCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCCCCSSC-------------
T ss_pred CCHHHHHHHHHHHHHHhcC---CCCEEEEEECHHHHHHHHHHHHHHhcCCCccEEEEECCCCCCccc-------------
Confidence 5899999999999988743 25899999999999999999988 8899999999987532210
Q ss_pred cchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhh
Q 013862 90 SGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANAR 169 (435)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (435)
.........+........ ............. ..+ ......+ ....
T Consensus 192 -~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l----~~~-------------------~~~~~~~------~~~~ 236 (319)
T 3lcr_A 192 -GRPEELFRSALNERFVEY-----LRLTGGGNLSQRI----TAQ-------------------VWCLELL------RGWR 236 (319)
T ss_dssp -CHHHHHHHHHHHHHHHHH-----HHHHCCCCHHHHH----HHH-------------------HHHHHHT------TTCC
T ss_pred -hhhHHHHHHHHHHHHhhh-----hcccCCCchhHHH----HHH-------------------HHHHHHH------hcCC
Confidence 000000110000000000 0000000000000 000 0000000 0112
Q ss_pred cccccceEEEEeeCCCCCCCChhHHHHHHhhCCC-ceEEEeCCCCcccccc--CchhHHHHHhhccccccc
Q 013862 170 LDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPN-CQTRRFGGGGHFLFLE--DGVDLVTTIKGAGYYRRG 237 (435)
Q Consensus 170 l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e--~pe~~~~~I~~~~Fl~~~ 237 (435)
...+++|+|+|+|++|. +++. ..+.+.+..++ .+++.++ +||+.+++ +|+++++.|.+ ||.+.
T Consensus 237 ~~~i~~PvLli~g~~~~-~~~~-~~~~~~~~~~~~~~~~~~~-g~H~~~~~~~~~~~va~~i~~--fL~~~ 302 (319)
T 3lcr_A 237 PEGLTAPTLYVRPAQPL-VEQE-KPEWRGDVLAAMGQVVEAP-GDHFTIIEGEHVASTAHIVGD--WLREA 302 (319)
T ss_dssp CCCCSSCEEEEEESSCS-SSCC-CTHHHHHHHHTCSEEEEES-SCTTGGGSTTTHHHHHHHHHH--HHHHH
T ss_pred CCCcCCCEEEEEeCCCC-CCcc-cchhhhhcCCCCceEEEeC-CCcHHhhCcccHHHHHHHHHH--HHHhc
Confidence 35789999999999855 4444 36666666654 6788888 58988886 99999999999 88654
|
| >3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.45 E-value=7.8e-13 Score=116.89 Aligned_cols=162 Identities=11% Similarity=0.006 Sum_probs=106.8
Q ss_pred CCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCC-----ceeEEEEecCCcccccccccccccc
Q 013862 10 QIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPD-----MDLVLILANPATSFRKSLLQTIMPI 84 (435)
Q Consensus 10 ~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~-----~v~~lVli~~~~~~~~~~~~~~~~~ 84 (435)
+..++++++++++.++++.+....+-++++++||||||.+++.++.++|+ +|+++|+++++..........
T Consensus 68 ~~~~~~~~~a~~l~~~i~~l~~~~~~~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~---- 143 (254)
T 3ds8_A 68 QNQATPDDWSKWLKIAMEDLKSRYGFTQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLDPNDNG---- 143 (254)
T ss_dssp STTSCHHHHHHHHHHHHHHHHHHHCCSEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCSCHHHHC----
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCcccccccc----
Confidence 34579999999997777776554444689999999999999999999998 899999999874321100000
Q ss_pred ccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhh
Q 013862 85 PAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASA 164 (435)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (435)
... .....+. . ...+..+ .
T Consensus 144 ---------------------~~~--------~~~~~p~-~-~~~~~~~-------------------------~----- 162 (254)
T 3ds8_A 144 ---------------------MDL--------SFKKLPN-S-TPQMDYF-------------------------I----- 162 (254)
T ss_dssp ---------------------SCT--------TCSSCSS-C-CHHHHHH-------------------------H-----
T ss_pred ---------------------ccc--------ccccCCc-c-hHHHHHH-------------------------H-----
Confidence 000 0000000 0 0000000 0
Q ss_pred hhhhhcccccceEEEEeeC------CCCCCCChhHHHHHHhhCCC----ceEEEeCC--CCccccccCchhHHHHHhhcc
Q 013862 165 YANARLDAVKAQTLILCSG------RDQLLPSEEEGDRLCRALPN----CQTRRFGG--GGHFLFLEDGVDLVTTIKGAG 232 (435)
Q Consensus 165 ~~~~~l~~i~~Pvlii~G~------~D~~~~~~~~~~~~~~~~~~----~~~~~i~~--~gH~~~~e~pe~~~~~I~~~~ 232 (435)
.....+.. ++|++.|+|+ .|..+|.. .++.+...+++ .+.+.+.+ ++|..+.++|+ +.+.|..
T Consensus 163 ~~~~~~~~-~~~vl~I~G~~~~~~~~Dg~Vp~~-ss~~l~~~~~~~~~~~~~~~~~g~~a~Hs~l~~~~~-v~~~i~~-- 237 (254)
T 3ds8_A 163 KNQTEVSP-DLEVLAIAGELSEDNPTDGIVPTI-SSLATRLFMPGSAKAYIEDIQVGEDAVHQTLHETPK-SIEKTYW-- 237 (254)
T ss_dssp HTGGGSCT-TCEEEEEEEESBTTBCBCSSSBHH-HHTGGGGTSBTTBSEEEEEEEESGGGCGGGGGGSHH-HHHHHHH--
T ss_pred HHHhhCCC-CcEEEEEEecCCCCCCCCcEeeHH-HHHHHHHHhhccCcceEEEEEeCCCCchhcccCCHH-HHHHHHH--
Confidence 00122333 7899999999 99999998 68888777764 23445555 77999999886 8888888
Q ss_pred ccccccccc
Q 013862 233 YYRRGRIVD 241 (435)
Q Consensus 233 Fl~~~~~~~ 241 (435)
|+++..+..
T Consensus 238 fL~~~~~~~ 246 (254)
T 3ds8_A 238 FLEKFKTDE 246 (254)
T ss_dssp HHHTCCCSS
T ss_pred HHHHhcCCC
Confidence 887665443
|
| >3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A | Back alignment and structure |
|---|
Probab=99.42 E-value=3e-12 Score=117.72 Aligned_cols=177 Identities=14% Similarity=0.110 Sum_probs=108.2
Q ss_pred CChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHh---CCCceeEEEEecCCccccccccccccccccccc
Q 013862 13 HHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAAR---NPDMDLVLILANPATSFRKSLLQTIMPIPAELM 89 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~---~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~ 89 (435)
.+++++++++.+.+..+.. .++++|+||||||.+|+.+|.+ +|++|+++|++++............ ....
T Consensus 146 ~~~~~~a~~~~~~i~~~~~---~~~~~l~G~S~Gg~ia~~~a~~L~~~~~~v~~lvl~d~~~~~~~~~~~~~----~~~~ 218 (329)
T 3tej_A 146 ANLDEVCEAHLATLLEQQP---HGPYYLLGYSLGGTLAQGIAARLRARGEQVAFLGLLDTWPPETQNWQEKE----ANGL 218 (329)
T ss_dssp SSHHHHHHHHHHHHHHHCS---SSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCTHHHHTC---------CC
T ss_pred CCHHHHHHHHHHHHHHhCC---CCCEEEEEEccCHHHHHHHHHHHHhcCCcccEEEEeCCCCCCcccccccc----cccc
Confidence 5899999998888877643 2689999999999999999999 9999999999998764321100000 0011
Q ss_pred cchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhh-hhhhhh
Q 013862 90 SGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSA-SAYANA 168 (435)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 168 (435)
................ .................. +... ......
T Consensus 219 ~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~ 263 (329)
T 3tej_A 219 DPEVLAEINREREAFL---------AAQQGSTSTELFTTIEGN--------------------------YADAVRLLTTA 263 (329)
T ss_dssp CCTHHHHHHHHHHHHH---------HTTCCCSCCHHHHHHHHH--------------------------HHHHHHHHTTC
T ss_pred ChhhHHHHHHHHHHHH---------HhccccccHHHHHHHHHH--------------------------HHHHHHHHhcC
Confidence 1111100000000000 000000000000000000 0000 000112
Q ss_pred hcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCc--hhHHHHHhhccccc
Q 013862 169 RLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDG--VDLVTTIKGAGYYR 235 (435)
Q Consensus 169 ~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p--e~~~~~I~~~~Fl~ 235 (435)
....+++|++++.|++|...+.. ....+.+..++.+++.++ |||+.+++.| +.+++.|.+ |+.
T Consensus 264 ~~~~~~~pv~l~~~~~d~~~~~~-~~~~w~~~~~~~~~~~v~-g~H~~~~~~~~~~~ia~~l~~--~L~ 328 (329)
T 3tej_A 264 HSVPFDGKATLFVAERTLQEGMS-PERAWSPWIAELDIYRQD-CAHVDIISPGTFEKIGPIIRA--TLN 328 (329)
T ss_dssp CCCCEEEEEEEEEEGGGCCTTCC-HHHHHTTTEEEEEEEEES-SCGGGGGSTTTHHHHHHHHHH--HHC
T ss_pred CCCCcCCCeEEEEeccCCCCCCC-chhhHHHhcCCcEEEEec-CChHHhCCChHHHHHHHHHHH--Hhc
Confidence 34578999999999999888776 567788888888999998 7999998887 789999988 764
|
| >3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.42 E-value=1.1e-12 Score=114.58 Aligned_cols=145 Identities=9% Similarity=0.026 Sum_probs=102.5
Q ss_pred ChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhC-----CCceeEEEEecCCcccccccccccccccccc
Q 013862 14 HFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARN-----PDMDLVLILANPATSFRKSLLQTIMPIPAEL 88 (435)
Q Consensus 14 s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~-----p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~ 88 (435)
+++++++++.++++.+...++.++++++||||||.+++.|+.++ |++|+++|+++++.......
T Consensus 76 ~~~~~a~~l~~~~~~l~~~~~~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~g~~~~----------- 144 (250)
T 3lp5_A 76 NIDKQAVWLNTAFKALVKTYHFNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMESTS----------- 144 (250)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCCSEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTTTTCCC-----------
T ss_pred CHHHHHHHHHHHHHHHHHHcCCCCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCCccccc-----------
Confidence 78899999999999996655557999999999999999999988 67999999999874321100
Q ss_pred ccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhh
Q 013862 89 MSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANA 168 (435)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (435)
. ... . ..+..+.. ...
T Consensus 145 -------------------~----------~~~-~----~~~~~l~~------------------------------~~~ 160 (250)
T 3lp5_A 145 -------------------T----------TAK-T----SMFKELYR------------------------------YRT 160 (250)
T ss_dssp -------------------S----------SCC-C----HHHHHHHH------------------------------TGG
T ss_pred -------------------c----------ccc-C----HHHHHHHh------------------------------ccc
Confidence 0 000 0 00001000 012
Q ss_pred hcccccceEEEEeeC----CCCCCCChhHHHHHHhhCCC--c--eEEEeC--CCCccccccCchhHHHHHhhcccccccc
Q 013862 169 RLDAVKAQTLILCSG----RDQLLPSEEEGDRLCRALPN--C--QTRRFG--GGGHFLFLEDGVDLVTTIKGAGYYRRGR 238 (435)
Q Consensus 169 ~l~~i~~Pvlii~G~----~D~~~~~~~~~~~~~~~~~~--~--~~~~i~--~~gH~~~~e~pe~~~~~I~~~~Fl~~~~ 238 (435)
.+.. ++|+++|+|+ .|..+|.. .++.+...+++ . +.+.+. +++|..+.|+| ++.+.|.+ ||....
T Consensus 161 ~lp~-~vpvl~I~G~~~~~~Dg~Vp~~-sa~~l~~l~~~~~~~~~~~~v~g~~a~H~~l~e~~-~v~~~I~~--FL~~~~ 235 (250)
T 3lp5_A 161 GLPE-SLTVYSIAGTENYTSDGTVPYN-SVNYGKYIFQDQVKHFTEITVTGANTAHSDLPQNK-QIVSLIRQ--YLLAET 235 (250)
T ss_dssp GSCT-TCEEEEEECCCCCCTTTBCCHH-HHTTHHHHHTTTSSEEEEEECTTTTBSSCCHHHHH-HHHHHHHH--HTSCCC
T ss_pred cCCC-CceEEEEEecCCCCCCceeeHH-HHHHHHHHhcccccceEEEEEeCCCCchhcchhCH-HHHHHHHH--HHhccc
Confidence 2333 7899999999 89999988 57666665543 2 233443 57799999999 79999999 987554
|
| >2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.42 E-value=9.2e-13 Score=114.11 Aligned_cols=126 Identities=14% Similarity=0.058 Sum_probs=90.3
Q ss_pred CCChHHHHHHHHHHHHHh---hhcC--CCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccccccccccccc
Q 013862 12 GHHFTGLLKLIERTIRSE---NCRS--SNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPA 86 (435)
Q Consensus 12 ~~s~~~~a~dl~~~l~~l---~~~~--~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~ 86 (435)
.++.+++.+++.++++.+ .... ..++++++||||||.+++.+|.++|++++++|++++....
T Consensus 90 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~------------- 156 (226)
T 2h1i_A 90 IFDEEDLIFRTKELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPR------------- 156 (226)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSC-------------
T ss_pred CcChhhHHHHHHHHHHHHHHHHhhcCCCcccEEEEEEChHHHHHHHHHHhChhhhCEEEEeCCCCCc-------------
Confidence 456666666554444433 2222 3468999999999999999999999999999999987321
Q ss_pred ccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhh
Q 013862 87 ELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYA 166 (435)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (435)
..
T Consensus 157 ~~------------------------------------------------------------------------------ 158 (226)
T 2h1i_A 157 RG------------------------------------------------------------------------------ 158 (226)
T ss_dssp SS------------------------------------------------------------------------------
T ss_pred Cc------------------------------------------------------------------------------
Confidence 00
Q ss_pred hhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCC----ceEEEeCCCCccccccCchhHHHHHhh
Q 013862 167 NARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPN----CQTRRFGGGGHFLFLEDGVDLVTTIKG 230 (435)
Q Consensus 167 ~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~----~~~~~i~~~gH~~~~e~pe~~~~~I~~ 230 (435)
......+++|+++++|++|.+++.+ ..+.+.+.+++ .++ +++++||..+.+.++.+.+.|.+
T Consensus 159 ~~~~~~~~~p~l~~~G~~D~~~~~~-~~~~~~~~l~~~~~~~~~-~~~~~gH~~~~~~~~~~~~~l~~ 224 (226)
T 2h1i_A 159 MQLANLAGKSVFIAAGTNDPICSSA-ESEELKVLLENANANVTM-HWENRGHQLTMGEVEKAKEWYDK 224 (226)
T ss_dssp CCCCCCTTCEEEEEEESSCSSSCHH-HHHHHHHHHHTTTCEEEE-EEESSTTSCCHHHHHHHHHHHHH
T ss_pred cccccccCCcEEEEeCCCCCcCCHH-HHHHHHHHHHhcCCeEEE-EeCCCCCCCCHHHHHHHHHHHHH
Confidence 0011234789999999999999988 67888777653 345 99999999976666655555544
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.41 E-value=6.1e-13 Score=132.43 Aligned_cols=170 Identities=16% Similarity=0.206 Sum_probs=106.9
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
||.+..............+|+.+.++.+......++++|+||||||.+|+.+|.++|++++++|+++|.......
T Consensus 403 ~G~s~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~----- 477 (582)
T 3o4h_A 403 YGEEWRLKIIGDPCGGELEDVSAAARWARESGLASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEEM----- 477 (582)
T ss_dssp SCHHHHHTTTTCTTTHHHHHHHHHHHHHHHTTCEEEEEEEEETHHHHHHHHHHHHSTTTSSCEEEESCCCCHHHH-----
T ss_pred CchhHHhhhhhhcccccHHHHHHHHHHHHhCCCcceEEEEEECHHHHHHHHHHhcCCCceEEEEEcCCccCHHHH-----
Confidence 455544333333333445666666666644211128999999999999999999999999999999986431100
Q ss_pred cccccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhh
Q 013862 82 MPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKS 161 (435)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (435)
...... ....+.... .. .....+..
T Consensus 478 ----~~~~~~----~~~~~~~~~-------------------------~~------~~~~~~~~---------------- 502 (582)
T 3o4h_A 478 ----YELSDA----AFRNFIEQL-------------------------TG------GSREIMRS---------------- 502 (582)
T ss_dssp ----HHTCCH----HHHHHHHHH-------------------------TT------TCHHHHHH----------------
T ss_pred ----hhcccc----hhHHHHHHH-------------------------cC------cCHHHHHh----------------
Confidence 000000 000000000 00 00000000
Q ss_pred hhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCC----ceEEEeCCCCcccc-ccCchhHHHHHhhcccccc
Q 013862 162 ASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPN----CQTRRFGGGGHFLF-LEDGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 162 ~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~----~~~~~i~~~gH~~~-~e~pe~~~~~I~~~~Fl~~ 236 (435)
......+.++++|+|+++|++|..+|+. ..+.+.+.+++ .++++++++||.++ .++++++.+.+.+ |+.+
T Consensus 503 --~sp~~~~~~i~~P~lii~G~~D~~v~~~-~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~--fl~~ 577 (582)
T 3o4h_A 503 --RSPINHVDRIKEPLALIHPQNASRTPLK-PLLRLMGELLARGKTFEAHIIPDAGHAINTMEDAVKILLPAVF--FLAT 577 (582)
T ss_dssp --TCGGGGGGGCCSCEEEEEETTCSSSCHH-HHHHHHHHHHHTTCCEEEEEETTCCSSCCBHHHHHHHHHHHHH--HHHH
T ss_pred --cCHHHHHhcCCCCEEEEecCCCCCcCHH-HHHHHHHHHHhCCCCEEEEEECCCCCCCCChHHHHHHHHHHHH--HHHH
Confidence 0012345678899999999999999988 67777776654 79999999999987 5788889999988 7754
|
| >3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.40 E-value=5.1e-13 Score=115.58 Aligned_cols=118 Identities=17% Similarity=0.124 Sum_probs=88.5
Q ss_pred ChHHHHHHHHHHHHHhhhcC--CCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccccc
Q 013862 14 HFTGLLKLIERTIRSENCRS--SNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSG 91 (435)
Q Consensus 14 s~~~~a~dl~~~l~~l~~~~--~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~ 91 (435)
++.+.++++.++++.+.... +.++++|+||||||.+|+.+|.++|++++++|++++... ..
T Consensus 87 ~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~-------------~~---- 149 (223)
T 3b5e_A 87 SILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPV-------------LD---- 149 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCC-------------CS----
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEECcHHHHHHHHHHhCccccceEEEecCccC-------------cc----
Confidence 45667778888887764321 235899999999999999999999999999999987631 00
Q ss_pred hhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhcc
Q 013862 92 QMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARLD 171 (435)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 171 (435)
.. ....
T Consensus 150 --------------------------~~------------------------------------------------~~~~ 155 (223)
T 3b5e_A 150 --------------------------HV------------------------------------------------PATD 155 (223)
T ss_dssp --------------------------SC------------------------------------------------CCCC
T ss_pred --------------------------cc------------------------------------------------cccc
Confidence 00 0012
Q ss_pred cccceEEEEeeCCCCCCCChhHHHHHHhhCC----CceEEEeCCCCccccccCchhHH
Q 013862 172 AVKAQTLILCSGRDQLLPSEEEGDRLCRALP----NCQTRRFGGGGHFLFLEDGVDLV 225 (435)
Q Consensus 172 ~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~----~~~~~~i~~~gH~~~~e~pe~~~ 225 (435)
.+++|+++++|++|.+++.+ ..+ +.+.++ +.++++++ +||.+..+.++++.
T Consensus 156 ~~~~P~li~~G~~D~~v~~~-~~~-~~~~l~~~g~~~~~~~~~-~gH~~~~~~~~~i~ 210 (223)
T 3b5e_A 156 LAGIRTLIIAGAADETYGPF-VPA-LVTLLSRHGAEVDARIIP-SGHDIGDPDAAIVR 210 (223)
T ss_dssp CTTCEEEEEEETTCTTTGGG-HHH-HHHHHHHTTCEEEEEEES-CCSCCCHHHHHHHH
T ss_pred ccCCCEEEEeCCCCCcCCHH-HHH-HHHHHHHCCCceEEEEec-CCCCcCHHHHHHHH
Confidence 35789999999999999998 577 776665 57899999 99998766554333
|
| >3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba} | Back alignment and structure |
|---|
Probab=99.39 E-value=2.2e-12 Score=117.40 Aligned_cols=127 Identities=15% Similarity=0.163 Sum_probs=99.1
Q ss_pred ChHHHHHHHHHHHHHhhhc--------CCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccc
Q 013862 14 HFTGLLKLIERTIRSENCR--------SSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIP 85 (435)
Q Consensus 14 s~~~~a~dl~~~l~~l~~~--------~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~ 85 (435)
+.....+|+.+.++.+... .+.++++++||||||.+++.+|.++|+ ++++|++++..
T Consensus 137 s~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~v~l~G~S~GG~~a~~~a~~~p~-v~~~v~~~~~~-------------- 201 (306)
T 3vis_A 137 QPDSRARQLNAALDYMLTDASSAVRNRIDASRLAVMGHSMGGGGTLRLASQRPD-LKAAIPLTPWH-------------- 201 (306)
T ss_dssp CHHHHHHHHHHHHHHHHHTSCHHHHTTEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCC--------------
T ss_pred CcchHHHHHHHHHHHHHhhcchhhhccCCcccEEEEEEChhHHHHHHHHhhCCC-eeEEEEecccc--------------
Confidence 4445556666666655442 113589999999999999999999998 99999988752
Q ss_pred cccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhh
Q 013862 86 AELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAY 165 (435)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (435)
.
T Consensus 202 -~------------------------------------------------------------------------------ 202 (306)
T 3vis_A 202 -L------------------------------------------------------------------------------ 202 (306)
T ss_dssp -S------------------------------------------------------------------------------
T ss_pred -C------------------------------------------------------------------------------
Confidence 1
Q ss_pred hhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCC---ceEEEeCCCCccccccCchhHHHHHhhccccccc
Q 013862 166 ANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPN---CQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRRG 237 (435)
Q Consensus 166 ~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~---~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~~ 237 (435)
...+.++++|+++++|++|.+++.+...+.+.+.+++ .++++++++||..+.++++++.+.+.+ |+++.
T Consensus 203 -~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~gH~~~~~~~~~~~~~i~~--fl~~~ 274 (306)
T 3vis_A 203 -NKSWRDITVPTLIIGAEYDTIASVTLHSKPFYNSIPSPTDKAYLELDGASHFAPNITNKTIGMYSVA--WLKRF 274 (306)
T ss_dssp -CCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHTCCTTSCEEEEEETTCCTTGGGSCCHHHHHHHHH--HHHHH
T ss_pred -ccccccCCCCEEEEecCCCcccCcchhHHHHHHHhccCCCceEEEECCCCccchhhchhHHHHHHHH--HHHHH
Confidence 0224456899999999999999987227888888775 469999999999999999999999999 77544
|
| >3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=99.37 E-value=7.6e-13 Score=119.00 Aligned_cols=65 Identities=18% Similarity=0.262 Sum_probs=51.6
Q ss_pred hcccccceEEEEeeCCCCCCCChhHHHHHHhhCC----CceEEEeCCCCccccccCc-------------hhHHHHHhhc
Q 013862 169 RLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALP----NCQTRRFGGGGHFLFLEDG-------------VDLVTTIKGA 231 (435)
Q Consensus 169 ~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~----~~~~~~i~~~gH~~~~e~p-------------e~~~~~I~~~ 231 (435)
.+.++++|+|+++|++|.++|.+ ..+.+.+.++ +.++++++++||....+.| +++.+.+.+
T Consensus 200 ~~~~~~~P~lii~G~~D~~~p~~-~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~- 277 (283)
T 3bjr_A 200 HVNSDNQPTFIWTTADDPIVPAT-NTLAYATALATAKIPYELHVFKHGPHGLALANAQTAWKPDANQPHVAHWLTLALE- 277 (283)
T ss_dssp SCCTTCCCEEEEEESCCTTSCTH-HHHHHHHHHHHTTCCEEEEEECCCSHHHHHHHHHHSCC-------CCHHHHHHHH-
T ss_pred hccCCCCCEEEEEcCCCCCCChH-HHHHHHHHHHHCCCCeEEEEeCCCCcccccccccccccccccchhHHHHHHHHHH-
Confidence 35667899999999999999988 6777777654 3599999999998777665 677777777
Q ss_pred ccccc
Q 013862 232 GYYRR 236 (435)
Q Consensus 232 ~Fl~~ 236 (435)
|+++
T Consensus 278 -fl~~ 281 (283)
T 3bjr_A 278 -WLAD 281 (283)
T ss_dssp -HHHH
T ss_pred -HHhh
Confidence 6643
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.37 E-value=1.1e-12 Score=125.11 Aligned_cols=57 Identities=16% Similarity=0.112 Sum_probs=42.5
Q ss_pred CChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcc
Q 013862 13 HHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATS 72 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~ 72 (435)
++.+++.+.+..+.+.... ..++++|+||||||.+|+.+|.++|+ ++++|++++...
T Consensus 204 ~~~~d~~~~~~~l~~~~~v--~~~~i~l~G~S~GG~lAl~~a~~~p~-v~a~V~~~~~~~ 260 (422)
T 3k2i_A 204 ISLEYFEEAVCYMLQHPQV--KGPGIGLLGISLGADICLSMASFLKN-VSATVSINGSGI 260 (422)
T ss_dssp EETHHHHHHHHHHHTSTTB--CCSSEEEEEETHHHHHHHHHHHHCSS-EEEEEEESCCSB
T ss_pred CCHHHHHHHHHHHHhCcCc--CCCCEEEEEECHHHHHHHHHHhhCcC-ccEEEEEcCccc
Confidence 4555555554444443322 13689999999999999999999998 999999998753
|
| >3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.37 E-value=3.1e-12 Score=117.53 Aligned_cols=61 Identities=8% Similarity=0.034 Sum_probs=47.5
Q ss_pred ceEEEEeeCCCCCCCCh-hHHHHHHhhCCCceEEEeCCCCccccc---cCchhHHHHHhhccccccc
Q 013862 175 AQTLILCSGRDQLLPSE-EEGDRLCRALPNCQTRRFGGGGHFLFL---EDGVDLVTTIKGAGYYRRG 237 (435)
Q Consensus 175 ~Pvlii~G~~D~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~---e~pe~~~~~I~~~~Fl~~~ 237 (435)
+|+|+++|++|..++.. ...+.+.+..+++++++++++||..+. ++++++.+.|.+ |+++.
T Consensus 257 ~P~lii~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~i~~--fl~~~ 321 (326)
T 3d7r_A 257 PPVYMFGGGREMTHPDMKLFEQMMLQHHQYIEFYDYPKMVHDFPIYPIRQSHKAIKQIAK--SIDED 321 (326)
T ss_dssp CCEEEEEETTSTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSSSHHHHHHHHHHHH--HHTSC
T ss_pred CCEEEEEeCcccchHHHHHHHHHHHHCCCcEEEEEeCCCcccccccCCHHHHHHHHHHHH--HHHHH
Confidence 59999999999754321 123445555667899999999999988 889999999999 88654
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.36 E-value=5.7e-12 Score=117.62 Aligned_cols=63 Identities=11% Similarity=0.145 Sum_probs=51.3
Q ss_pred hhccccc-ceEEEEeeCCCCCCCChhHHHHHHh-hCCCceEEEeCCCCccccccCchh-HHHHHhhccccc
Q 013862 168 ARLDAVK-AQTLILCSGRDQLLPSEEEGDRLCR-ALPNCQTRRFGGGGHFLFLEDGVD-LVTTIKGAGYYR 235 (435)
Q Consensus 168 ~~l~~i~-~Pvlii~G~~D~~~~~~~~~~~~~~-~~~~~~~~~i~~~gH~~~~e~pe~-~~~~I~~~~Fl~ 235 (435)
..+.+++ +|+|+++|++|. +.. ..+.+.+ ..++.++++++++||..+.+.|+. +.+.+.+ |++
T Consensus 299 ~~~~~i~~~PvLii~G~~D~--~~~-~~~~~~~~~~~~~~~~~~~g~gH~~~~~~~~~~~~~~i~~--fl~ 364 (367)
T 2hdw_A 299 TYIKEISPRPILLIHGERAH--SRY-FSETAYAAAAEPKELLIVPGASHVDLYDRLDRIPFDRIAG--FFD 364 (367)
T ss_dssp TTGGGGTTSCEEEEEETTCT--THH-HHHHHHHHSCSSEEEEEETTCCTTHHHHCTTTSCHHHHHH--HHH
T ss_pred HhHHhhcCCceEEEecCCCC--CHH-HHHHHHHhCCCCeeEEEeCCCCeeeeecCchhHHHHHHHH--HHH
Confidence 4567888 999999999998 666 5777766 456789999999999988888775 5788888 765
|
| >3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.36 E-value=3.7e-12 Score=111.30 Aligned_cols=136 Identities=16% Similarity=0.140 Sum_probs=94.7
Q ss_pred CChHHHHHHHHHHHHHhhhcCC-CCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccccc
Q 013862 13 HHFTGLLKLIERTIRSENCRSS-NRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSG 91 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~~~-~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~ 91 (435)
++.++.++|+.++++.+..... .++++++||||||.+++.++.++|+ +.++|++.+....... ...
T Consensus 91 ~~~~~~~~d~~~~~~~l~~~~~d~~~i~l~G~S~Gg~~a~~~a~~~~~-~~~~v~~~~~~~~~~~-----------~~~- 157 (241)
T 3f67_A 91 VPDAQVLADLDHVASWAARHGGDAHRLLITGFCWGGRITWLYAAHNPQ-LKAAVAWYGKLVGEKS-----------LNS- 157 (241)
T ss_dssp SCHHHHHHHHHHHHHHHHTTTEEEEEEEEEEETHHHHHHHHHHTTCTT-CCEEEEESCCCSCCCC-----------SSS-
T ss_pred CCchhhHHHHHHHHHHHHhccCCCCeEEEEEEcccHHHHHHHHhhCcC-cceEEEEeccccCCCc-----------cCC-
Confidence 3556789999999998865321 2579999999999999999999997 6666665544210000 000
Q ss_pred hhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhcc
Q 013862 92 QMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARLD 171 (435)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 171 (435)
.. .....+.
T Consensus 158 --------------------------------------------------------~~---------------~~~~~~~ 166 (241)
T 3f67_A 158 --------------------------------------------------------PK---------------HPVDIAV 166 (241)
T ss_dssp --------------------------------------------------------CC---------------CHHHHGG
T ss_pred --------------------------------------------------------cc---------------CHHHhhh
Confidence 00 0012345
Q ss_pred cccceEEEEeeCCCCCCCChhHHHHHHhhC----CCceEEEeCCCCccccccC--------chhHHHHHhhccccc
Q 013862 172 AVKAQTLILCSGRDQLLPSEEEGDRLCRAL----PNCQTRRFGGGGHFLFLED--------GVDLVTTIKGAGYYR 235 (435)
Q Consensus 172 ~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~----~~~~~~~i~~~gH~~~~e~--------pe~~~~~I~~~~Fl~ 235 (435)
++++|+++++|++|.+++.+ ..+.+.+.+ ++.++++++++||....+. .++..+.+.+ ||+
T Consensus 167 ~~~~P~l~~~g~~D~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~--fl~ 239 (241)
T 3f67_A 167 DLNAPVLGLYGAKDASIPQD-TVETMRQALRAANATAEIVVYPEADHAFNADYRASYHEESAKDGWQRMLA--WFA 239 (241)
T ss_dssp GCCSCEEEEEETTCTTSCHH-HHHHHHHHHHHTTCSEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHH--HHT
T ss_pred hcCCCEEEEEecCCCCCCHH-HHHHHHHHHHHcCCCcEEEEECCCCcceecCCCCCCCHHHHHHHHHHHHH--HHh
Confidence 56899999999999999988 577776665 6789999999999887542 2445556666 554
|
| >2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A | Back alignment and structure |
|---|
Probab=99.34 E-value=4.3e-12 Score=117.26 Aligned_cols=180 Identities=15% Similarity=0.134 Sum_probs=101.8
Q ss_pred CChHHHHHHHHHHHHHhhhcCC--------CCCEEEEEeChhHHHHHHHHHhCCC--------ceeEEEEecCCcccccc
Q 013862 13 HHFTGLLKLIERTIRSENCRSS--------NRPVYLVGESLGACLALAVAARNPD--------MDLVLILANPATSFRKS 76 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~~~--------~~~~~lvGhS~Gg~va~~~a~~~p~--------~v~~lVli~~~~~~~~~ 76 (435)
.++....+|+.+.++.+..... .++++|+||||||.+|+.+|.++|+ +++++|+++|.......
T Consensus 130 ~~~~~~~~d~~~~~~~l~~~~~~~~~~~~d~~~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~v~~~vl~~p~~~~~~~ 209 (338)
T 2o7r_A 130 HRLPAAYDDAMEALQWIKDSRDEWLTNFADFSNCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKGLVLDEPGFGGSKR 209 (338)
T ss_dssp TCTTHHHHHHHHHHHHHHTCCCHHHHHHEEEEEEEEEEETHHHHHHHHHHHHHHTTHHHHTTCCEEEEEEESCCCCCSSC
T ss_pred CCCchHHHHHHHHHHHHHhCCcchhhccCCcceEEEEEeCccHHHHHHHHHHhccccccCCCCceeEEEEECCccCCCcC
Confidence 3556677788887777654211 1479999999999999999999988 89999999987532211
Q ss_pred ccccccccccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhh-cchhHHhccCCchhhhhH
Q 013862 77 LLQTIMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMS-SYLPVLANILPKETLLWK 155 (435)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 155 (435)
.... . ... ... .................. .............
T Consensus 210 ~~~~----------------~----~~~-~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 252 (338)
T 2o7r_A 210 TGSE----------------L----RLA-NDS-----------RLPTFVLDLIWELSLPMGADRDHEYCNPTAES----- 252 (338)
T ss_dssp CHHH----------------H----HTT-TCS-----------SSCHHHHHHHHHHHSCTTCCTTSTTTCCC--------
T ss_pred Chhh----------------h----ccC-CCc-----------ccCHHHHHHHHHHhCCCCCCCCCcccCCCCCC-----
Confidence 0000 0 000 000 000000000000000000 0000000000000
Q ss_pred HhhhhhhhhhhhhhcccccceEEEEeeCCCCCCCChh-HHHHHHhhCCCceEEEeCCCCccccccCc---hhHHHHHhhc
Q 013862 156 LELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEE-EGDRLCRALPNCQTRRFGGGGHFLFLEDG---VDLVTTIKGA 231 (435)
Q Consensus 156 ~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p---e~~~~~I~~~ 231 (435)
......+.+..+++|+|+++|++|.+++... ..+.+.+..+++++++++++||.++.++| +++.+.|.+
T Consensus 253 ------~~~~~~~~l~~~~~P~Lvi~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~g~gH~~~~~~~~~~~~~~~~i~~- 325 (338)
T 2o7r_A 253 ------EPLYSFDKIRSLGWRVMVVGCHGDPMIDRQMELAERLEKKGVDVVAQFDVGGYHAVKLEDPEKAKQFFVILKK- 325 (338)
T ss_dssp -------CCTHHHHHHHHTCEEEEEEETTSTTHHHHHHHHHHHHHTTCEEEEEEESSCCTTGGGTCHHHHHHHHHHHHH-
T ss_pred ------cccccHhhhcCCCCCEEEEECCCCcchHHHHHHHHHHHHCCCcEEEEEECCCceEEeccChHHHHHHHHHHHH-
Confidence 0000013345567899999999999887321 24455555667899999999999988777 788889998
Q ss_pred cccccc
Q 013862 232 GYYRRG 237 (435)
Q Consensus 232 ~Fl~~~ 237 (435)
|+.+.
T Consensus 326 -Fl~~~ 330 (338)
T 2o7r_A 326 -FVVDS 330 (338)
T ss_dssp -HHC--
T ss_pred -HHHhh
Confidence 88654
|
| >3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.34 E-value=9.6e-12 Score=108.72 Aligned_cols=158 Identities=13% Similarity=0.053 Sum_probs=99.8
Q ss_pred CCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCC-----ceeEEEEecCCcccccccccccccccc
Q 013862 12 GHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPD-----MDLVLILANPATSFRKSLLQTIMPIPA 86 (435)
Q Consensus 12 ~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~-----~v~~lVli~~~~~~~~~~~~~~~~~~~ 86 (435)
..+++++++++.++++.+....+-++++++||||||.+++.++.++|+ +|+++|+++++........
T Consensus 73 ~~~~~~~~~~l~~~i~~l~~~~~~~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~-------- 144 (249)
T 3fle_A 73 NGNFKENAYWIKEVLSQLKSQFGIQQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNGILNMN-------- 144 (249)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTCCTTTS--------
T ss_pred CccHHHHHHHHHHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccCCccccc--------
Confidence 346777888888888888554444689999999999999999999874 7999999987743211100
Q ss_pred ccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhh
Q 013862 87 ELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYA 166 (435)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (435)
...... .......+. .....+..+ . ..
T Consensus 145 --~~~~~~--------------------~~~~~g~p~-~~~~~~~~l-------------------------~-----~~ 171 (249)
T 3fle_A 145 --ENVNEI--------------------IVDKQGKPS-RMNAAYRQL-------------------------L-----SL 171 (249)
T ss_dssp --SCTTTS--------------------CBCTTCCBS-SCCHHHHHT-------------------------G-----GG
T ss_pred --CCcchh--------------------hhcccCCCc-ccCHHHHHH-------------------------H-----HH
Confidence 000000 000000000 000000000 0 01
Q ss_pred hhhcccccceEEEEeeC------CCCCCCChhHHHHHHhhCCCc----eEEEeCC--CCccccccCchhHHHHHhhcccc
Q 013862 167 NARLDAVKAQTLILCSG------RDQLLPSEEEGDRLCRALPNC----QTRRFGG--GGHFLFLEDGVDLVTTIKGAGYY 234 (435)
Q Consensus 167 ~~~l~~i~~Pvlii~G~------~D~~~~~~~~~~~~~~~~~~~----~~~~i~~--~gH~~~~e~pe~~~~~I~~~~Fl 234 (435)
...++..++|+|.|+|+ .|..+|.. .++.+...+++. +.+++.| +.|....++| ++.+.|.+ ||
T Consensus 172 ~~~~p~~~~~vl~I~G~~~~~~~sDG~V~~~-Sa~~~~~l~~~~~~~y~e~~v~g~~a~Hs~l~~n~-~V~~~I~~--FL 247 (249)
T 3fle_A 172 YKIYCGKEIEVLNIYGDLEDGSHSDGRVSNS-SSQSLQYLLRGSTKSYQEMKFKGAKAQHSQLHENK-DVANEIIQ--FL 247 (249)
T ss_dssp HHHHTTTTCEEEEEEEECCSSSCBSSSSBHH-HHHTHHHHSTTCSSEEEEEEEESGGGSTGGGGGCH-HHHHHHHH--HH
T ss_pred HhhCCccCCeEEEEeccCCCCCCCCCcccHH-HHHHHHHHHhhCCCceEEEEEeCCCCchhccccCH-HHHHHHHH--Hh
Confidence 23445568999999998 69999988 676666655542 5556654 8999999987 67788877 65
|
| >2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=1e-11 Score=115.39 Aligned_cols=174 Identities=16% Similarity=0.138 Sum_probs=100.1
Q ss_pred ChHHHHHHHHHHHHHhhhc------CCCC-CEEEEEeChhHHHHHHHHHhCCC---ceeEEEEecCCccccccccccccc
Q 013862 14 HFTGLLKLIERTIRSENCR------SSNR-PVYLVGESLGACLALAVAARNPD---MDLVLILANPATSFRKSLLQTIMP 83 (435)
Q Consensus 14 s~~~~a~dl~~~l~~l~~~------~~~~-~~~lvGhS~Gg~va~~~a~~~p~---~v~~lVli~~~~~~~~~~~~~~~~ 83 (435)
.+....+|+.+.++.+... ...+ +++|+||||||.+|+.+|.++|+ +++++|+++|.........
T Consensus 161 ~~~~~~~D~~~~~~~l~~~~~~~~~~d~~~~i~l~G~S~GG~la~~~a~~~~~~~~~v~~~vl~~p~~~~~~~~~----- 235 (351)
T 2zsh_A 161 PYPCAYDDGWIALNWVNSRSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGESGIDVLGNILLNPMFGGNERTE----- 235 (351)
T ss_dssp CTTHHHHHHHHHHHHHHTCGGGCCTTTSSCEEEEEEETHHHHHHHHHHHHHHTTTCCCCEEEEESCCCCCSSCCH-----
T ss_pred CCchhHHHHHHHHHHHHhCchhhcCCCCCCcEEEEEeCcCHHHHHHHHHHhhccCCCeeEEEEECCccCCCcCCh-----
Confidence 4445566666666665431 1235 89999999999999999999998 9999999988753211000
Q ss_pred cccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhh
Q 013862 84 IPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSAS 163 (435)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (435)
..... .... .................. ..... .....+
T Consensus 236 ------------~~~~~----~~~~-----------~~~~~~~~~~~~~~~~~~---------~~~~~--~~~~~~---- 273 (351)
T 2zsh_A 236 ------------SEKSL----DGKY-----------FVTVRDRDWYWKAFLPEG---------EDREH--PACNPF---- 273 (351)
T ss_dssp ------------HHHHH----TTTS-----------SCCHHHHHHHHHHHSCTT---------CCTTS--TTTCTT----
T ss_pred ------------hhhhc----CCCc-----------ccCHHHHHHHHHHhCCCC---------CCCCC--cccCCC----
Confidence 00000 0000 000000000111000000 00000 000000
Q ss_pred hhhhhhcccccc-eEEEEeeCCCCCCCCh-hHHHHHHhhCCCceEEEeCCCCccccc----cCchhHHHHHhhcccccc
Q 013862 164 AYANARLDAVKA-QTLILCSGRDQLLPSE-EEGDRLCRALPNCQTRRFGGGGHFLFL----EDGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 164 ~~~~~~l~~i~~-Pvlii~G~~D~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~----e~pe~~~~~I~~~~Fl~~ 236 (435)
......+.++++ |+|+++|++|.+++.. ...+.+.+...++++++++++||.++. ++++++.+.|.+ |+++
T Consensus 274 ~~~~~~l~~i~~pP~Lii~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~g~gH~~~~~~~~~~~~~~~~~i~~--Fl~~ 350 (351)
T 2zsh_A 274 SPRGKSLEGVSFPKSLVVVAGLDLIRDWQLAYAEGLKKAGQEVKLMHLEKATVGFYLLPNNNHFHNVMDEISA--FVNA 350 (351)
T ss_dssp STTSCCCTTCCCCEEEEEEETTSTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTTTSSSCSHHHHHHHHHHHH--HHHC
T ss_pred CCCccchhhCCCCCEEEEEcCCCcchHHHHHHHHHHHHcCCCEEEEEECCCcEEEEecCCCHHHHHHHHHHHH--HhcC
Confidence 001245566677 9999999999987622 123344444457899999999999887 889999999999 8753
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.34 E-value=2.2e-12 Score=123.74 Aligned_cols=57 Identities=18% Similarity=0.153 Sum_probs=42.0
Q ss_pred CChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcc
Q 013862 13 HHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATS 72 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~ 72 (435)
.+++++.+.+..+.+..+. ..++++|+||||||.+|+.+|.++|+ ++++|++++...
T Consensus 220 ~~~~d~~~a~~~l~~~~~v--d~~~i~l~G~S~GG~lAl~~A~~~p~-v~a~V~~~~~~~ 276 (446)
T 3hlk_A 220 LHLEYFEEAMNYLLSHPEV--KGPGVGLLGISKGGELCLSMASFLKG-ITAAVVINGSVA 276 (446)
T ss_dssp EEHHHHHHHHHHHHTSTTB--CCSSEEEEEETHHHHHHHHHHHHCSC-EEEEEEESCCSB
T ss_pred CCHHHHHHHHHHHHhCCCC--CCCCEEEEEECHHHHHHHHHHHhCCC-ceEEEEEcCccc
Confidence 3455554444444443332 13589999999999999999999998 999999988753
|
| >3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.33 E-value=2.5e-12 Score=110.03 Aligned_cols=120 Identities=13% Similarity=0.065 Sum_probs=83.9
Q ss_pred ChHHHHHHHHHHHHHhhhcC--CCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccccc
Q 013862 14 HFTGLLKLIERTIRSENCRS--SNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSG 91 (435)
Q Consensus 14 s~~~~a~dl~~~l~~l~~~~--~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~ 91 (435)
++++.++++.++++.+.... +.++++|+||||||.+|+.+|.++|++++++|++++..... .
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~-------------~--- 141 (209)
T 3og9_A 78 SLDEETDWLTDEVSLLAEKHDLDVHKMIAIGYSNGANVALNMFLRGKINFDKIIAFHGMQLED-------------F--- 141 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEETHHHHHHHHHHHTTSCCCSEEEEESCCCCCC-------------C---
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcceEEEEEECHHHHHHHHHHHhCCcccceEEEECCCCCCc-------------c---
Confidence 45555666666666553221 12589999999999999999999999999999998763100 0
Q ss_pred hhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhcc
Q 013862 92 QMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARLD 171 (435)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 171 (435)
.....
T Consensus 142 ---------------------------------------------------------------------------~~~~~ 146 (209)
T 3og9_A 142 ---------------------------------------------------------------------------EQTVQ 146 (209)
T ss_dssp ---------------------------------------------------------------------------CCCCC
T ss_pred ---------------------------------------------------------------------------ccccc
Confidence 00011
Q ss_pred cccceEEEEeeCCCCCCCChhHHHHHHhhCC----CceEEEeCCCCccccccCchhHHH
Q 013862 172 AVKAQTLILCSGRDQLLPSEEEGDRLCRALP----NCQTRRFGGGGHFLFLEDGVDLVT 226 (435)
Q Consensus 172 ~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~----~~~~~~i~~~gH~~~~e~pe~~~~ 226 (435)
..++|+++++|++|.++|.+ ..+.+.+.+. ..++++++ +||.+..+..+++.+
T Consensus 147 ~~~~p~li~~G~~D~~v~~~-~~~~~~~~l~~~~~~~~~~~~~-~gH~~~~~~~~~~~~ 203 (209)
T 3og9_A 147 LDDKHVFLSYAPNDMIVPQK-NFGDLKGDLEDSGCQLEIYESS-LGHQLTQEEVLAAKK 203 (209)
T ss_dssp CTTCEEEEEECTTCSSSCHH-HHHHHHHHHHHTTCEEEEEECS-STTSCCHHHHHHHHH
T ss_pred ccCCCEEEEcCCCCCccCHH-HHHHHHHHHHHcCCceEEEEcC-CCCcCCHHHHHHHHH
Confidence 34689999999999999988 5766666543 35777887 799886554444333
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=2.2e-11 Score=112.39 Aligned_cols=150 Identities=13% Similarity=0.061 Sum_probs=92.9
Q ss_pred CCChHHHHHHHHHHHHHhhhcC--CCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccc
Q 013862 12 GHHFTGLLKLIERTIRSENCRS--SNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELM 89 (435)
Q Consensus 12 ~~s~~~~a~dl~~~l~~l~~~~--~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~ 89 (435)
.+++...++|+.++++.+.... ..++++++|||+||.+++.+|.++| +++++|+.+|........ ....
T Consensus 166 ~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p-~v~~~vl~~p~~~~~~~~--------~~~~ 236 (337)
T 1vlq_A 166 TYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK-KAKALLCDVPFLCHFRRA--------VQLV 236 (337)
T ss_dssp TCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-SCCEEEEESCCSCCHHHH--------HHHC
T ss_pred HhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeCHHHHHHHHHHhcCC-CccEEEECCCcccCHHHH--------HhcC
Confidence 4556788999999999885421 1248999999999999999999999 599999988763211000 0000
Q ss_pred cchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhh
Q 013862 90 SGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANAR 169 (435)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (435)
.............. . + ......... +. ..+....
T Consensus 237 ~~~~~~~~~~~~~~--------------~---~-~~~~~~~~~--------------------------~~--~~~~~~~ 270 (337)
T 1vlq_A 237 DTHPYAEITNFLKT--------------H---R-DKEEIVFRT--------------------------LS--YFDGVNF 270 (337)
T ss_dssp CCTTHHHHHHHHHH--------------C---T-TCHHHHHHH--------------------------HH--TTCHHHH
T ss_pred CCcchHHHHHHHHh--------------C---c-hhHHHHHHh--------------------------hh--hccHHHH
Confidence 00000000000000 0 0 000000000 00 0011234
Q ss_pred cccccceEEEEeeCCCCCCCChhHHHHHHhhCCC-ceEEEeCCCCcccc
Q 013862 170 LDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPN-CQTRRFGGGGHFLF 217 (435)
Q Consensus 170 l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~ 217 (435)
+.++++|+|+++|++|..+|+. ....+.+.+++ .++++++++||...
T Consensus 271 ~~~i~~P~lii~G~~D~~~p~~-~~~~~~~~l~~~~~~~~~~~~gH~~~ 318 (337)
T 1vlq_A 271 AARAKIPALFSVGLMDNICPPS-TVFAAYNYYAGPKEIRIYPYNNHEGG 318 (337)
T ss_dssp HTTCCSCEEEEEETTCSSSCHH-HHHHHHHHCCSSEEEEEETTCCTTTT
T ss_pred HHHcCCCEEEEeeCCCCCCCch-hHHHHHHhcCCCcEEEEcCCCCCCCc
Confidence 5677899999999999999998 68888888874 78999999999963
|
| >2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina} | Back alignment and structure |
|---|
Probab=99.31 E-value=7.3e-12 Score=110.96 Aligned_cols=65 Identities=11% Similarity=0.048 Sum_probs=54.8
Q ss_pred cccccceEEEEeeCCCCCCCChhH-HHHHHhhC-CCceEEEeCCCCccccccCchhHHHHHhhccccccc
Q 013862 170 LDAVKAQTLILCSGRDQLLPSEEE-GDRLCRAL-PNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRRG 237 (435)
Q Consensus 170 l~~i~~Pvlii~G~~D~~~~~~~~-~~~~~~~~-~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~~ 237 (435)
+.++++|+|+++|++|.+++.. . .+.+.+.. .+.++++++++||+.+.++++++.+.+.+ |+++.
T Consensus 161 ~~~i~~P~lii~G~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~i~~--fl~~~ 227 (258)
T 2fx5_A 161 QRRQQGPMFLMSGGGDTIAFPY-LNAQPVYRRANVPVFWGERRYVSHFEPVGSGGAYRGPSTA--WFRFQ 227 (258)
T ss_dssp GGCCSSCEEEEEETTCSSSCHH-HHTHHHHHHCSSCEEEEEESSCCTTSSTTTCGGGHHHHHH--HHHHH
T ss_pred hccCCCCEEEEEcCCCcccCch-hhHHHHHhccCCCeEEEEECCCCCccccchHHHHHHHHHH--HHHHH
Confidence 4567899999999999999987 4 56666664 35899999999999999999999999999 77633
|
| >3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.30 E-value=1.3e-11 Score=110.33 Aligned_cols=152 Identities=17% Similarity=0.189 Sum_probs=102.4
Q ss_pred CChHHHHHHHHHHHHHhhhcC-----CCCCEEEEEeChhHHHHHHHHHh-CCCceeEEEEecCCcccccccccccccccc
Q 013862 13 HHFTGLLKLIERTIRSENCRS-----SNRPVYLVGESLGACLALAVAAR-NPDMDLVLILANPATSFRKSLLQTIMPIPA 86 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~~-----~~~~~~lvGhS~Gg~va~~~a~~-~p~~v~~lVli~~~~~~~~~~~~~~~~~~~ 86 (435)
.++....+|+.+.++.+.... ..++++|+||||||.+|+.+|.+ ++++++++|+++|........ . . .
T Consensus 91 ~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~p~~~~~~~~--~---~-~ 164 (276)
T 3hxk_A 91 NFLSQNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSEQIHRPKGVILCYPVTSFTFGW--P---S-D 164 (276)
T ss_dssp CTHHHHHHHHHHHHHHHHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSSSCSTTCCSEEEEEEECCBTTSSC--S---S-S
T ss_pred CcCchHHHHHHHHHHHHHHhHHHcCCCcceEEEEEeCHHHHHHHHHHhhccCCCccEEEEecCcccHHhhC--C---c-c
Confidence 466677788888877775431 23589999999999999999998 889999999999875432110 0 0 0
Q ss_pred ccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhh
Q 013862 87 ELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYA 166 (435)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (435)
... ......+ . . ....
T Consensus 165 ~~~----------------------------~~~~~~~----~-~-------------------------------~~~~ 180 (276)
T 3hxk_A 165 LSH----------------------------FNFEIEN----I-S-------------------------------EYNI 180 (276)
T ss_dssp SSS----------------------------SCCCCSC----C-G-------------------------------GGBT
T ss_pred hhh----------------------------hhcCchh----h-h-------------------------------hCCh
Confidence 000 0000000 0 0 0001
Q ss_pred hhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCC----CceEEEeCCCCccccccCc-------------hhHHHHHh
Q 013862 167 NARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALP----NCQTRRFGGGGHFLFLEDG-------------VDLVTTIK 229 (435)
Q Consensus 167 ~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~----~~~~~~i~~~gH~~~~e~p-------------e~~~~~I~ 229 (435)
...+.++++|+++++|++|.++|.+ ..+.+.+.+. +.++++++++||......+ +++.+.+.
T Consensus 181 ~~~~~~~~~P~lii~G~~D~~vp~~-~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (276)
T 3hxk_A 181 SEKVTSSTPPTFIWHTADDEGVPIY-NSLKYCDRLSKHQVPFEAHFFESGPHGVSLANRTTAPSDAYCLPSVHRWVSWAS 259 (276)
T ss_dssp TTTCCTTSCCEEEEEETTCSSSCTH-HHHHHHHHHHTTTCCEEEEEESCCCTTCTTCSTTSCSSSTTCCHHHHTHHHHHH
T ss_pred hhccccCCCCEEEEecCCCceeChH-HHHHHHHHHHHcCCCeEEEEECCCCCCccccCccccccccccCchHHHHHHHHH
Confidence 2345567899999999999999998 6777666543 4599999999998877655 55666666
Q ss_pred hccccccc
Q 013862 230 GAGYYRRG 237 (435)
Q Consensus 230 ~~~Fl~~~ 237 (435)
+ ||++.
T Consensus 260 ~--wl~~~ 265 (276)
T 3hxk_A 260 D--WLERQ 265 (276)
T ss_dssp H--HHHHH
T ss_pred H--HHHhC
Confidence 6 66544
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=1.2e-11 Score=125.93 Aligned_cols=150 Identities=15% Similarity=0.087 Sum_probs=102.0
Q ss_pred HHHHHHHHHHHhhhcC--CCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccccchhHH
Q 013862 18 LLKLIERTIRSENCRS--SNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTL 95 (435)
Q Consensus 18 ~a~dl~~~l~~l~~~~--~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (435)
..+|+.+.++.+.... ..++++|+||||||.+|+.+|.++|++++++|+++|..... .....
T Consensus 549 ~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~-------------~~~~~--- 612 (706)
T 2z3z_A 549 EMADQMCGVDFLKSQSWVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAGGPVIDWN-------------RYAIM--- 612 (706)
T ss_dssp HHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCCCCGG-------------GSBHH---
T ss_pred cHHHHHHHHHHHHhCCCCCchheEEEEEChHHHHHHHHHHhCCCcEEEEEEcCCccchH-------------HHHhh---
Confidence 4577777777764321 12479999999999999999999999999999998874311 00000
Q ss_pred HHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhcccccc
Q 013862 96 TLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARLDAVKA 175 (435)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 175 (435)
... .....+ .... ..+. .......+.++++
T Consensus 613 ~~~----~~~~~~--------------~~~~-~~~~-------------------------------~~~~~~~~~~i~~ 642 (706)
T 2z3z_A 613 YGE----RYFDAP--------------QENP-EGYD-------------------------------AANLLKRAGDLKG 642 (706)
T ss_dssp HHH----HHHCCT--------------TTCH-HHHH-------------------------------HHCGGGGGGGCCS
T ss_pred hhh----hhcCCc--------------ccCh-hhhh-------------------------------hCCHhHhHHhCCC
Confidence 000 000000 0000 0000 0011244567889
Q ss_pred eEEEEeeCCCCCCCChhHHHHHHhhCC----CceEEEeCCCCccccccCchhHHHHHhhcccccc
Q 013862 176 QTLILCSGRDQLLPSEEEGDRLCRALP----NCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 176 Pvlii~G~~D~~~~~~~~~~~~~~~~~----~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~ 236 (435)
|+|+++|++|..++.. ..+.+.+.++ ..++++++++||.++.++++++.+.+.+ |+.+
T Consensus 643 P~lii~G~~D~~v~~~-~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~--fl~~ 704 (706)
T 2z3z_A 643 RLMLIHGAIDPVVVWQ-HSLLFLDACVKARTYPDYYVYPSHEHNVMGPDRVHLYETITR--YFTD 704 (706)
T ss_dssp EEEEEEETTCSSSCTH-HHHHHHHHHHHHTCCCEEEEETTCCSSCCTTHHHHHHHHHHH--HHHH
T ss_pred CEEEEeeCCCCCCCHH-HHHHHHHHHHHCCCCeEEEEeCCCCCCCCcccHHHHHHHHHH--HHHH
Confidence 9999999999999998 6777776654 3599999999999998899999999999 7753
|
| >1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* | Back alignment and structure |
|---|
Probab=99.29 E-value=6.3e-11 Score=107.94 Aligned_cols=163 Identities=15% Similarity=0.080 Sum_probs=97.8
Q ss_pred CChHHHHHHHHHHHHHhhhcCC--CCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccccccccccccccccc
Q 013862 13 HHFTGLLKLIERTIRSENCRSS--NRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMS 90 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~~~--~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~ 90 (435)
+++...++|+.++++.+..... .++++++|||+||.+|+.+|.++|+ +.++|+++|......... ....
T Consensus 148 ~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~-~~~~v~~~p~~~~~~~~~--------~~~~ 218 (318)
T 1l7a_A 148 YYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAVADYPYLSNFERAI--------DVAL 218 (318)
T ss_dssp CHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEEEESCCSCCHHHHH--------HHCC
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcccceeEEEecChHHHHHHHHhccCCC-ccEEEecCCcccCHHHHH--------hcCC
Confidence 4567889999999988865311 2589999999999999999999986 778888776532110000 0000
Q ss_pred chhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhc
Q 013862 91 GQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARL 170 (435)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 170 (435)
............. .. ........... . ...+....+
T Consensus 219 ~~~~~~~~~~~~~---------------~~-~~~~~~~~~~~--------------------------~--~~~~~~~~~ 254 (318)
T 1l7a_A 219 EQPYLEINSFFRR---------------NG-SPETEVQAMKT--------------------------L--SYFDIMNLA 254 (318)
T ss_dssp STTTTHHHHHHHH---------------SC-CHHHHHHHHHH--------------------------H--HTTCHHHHG
T ss_pred cCccHHHHHHHhc---------------cC-CcccHHHHHHh--------------------------h--ccccHHHHH
Confidence 0000000000000 00 00000000000 0 000112345
Q ss_pred ccccceEEEEeeCCCCCCCChhHHHHHHhhCCC-ceEEEeCCCCccccccCchhHHHHHhhccccc
Q 013862 171 DAVKAQTLILCSGRDQLLPSEEEGDRLCRALPN-CQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYR 235 (435)
Q Consensus 171 ~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~ 235 (435)
.++++|+++++|++|.+++.+ ..+.+.+.+++ .++++++++||.. +.++.+.+.+ |+.
T Consensus 255 ~~~~~P~li~~g~~D~~~~~~-~~~~~~~~l~~~~~~~~~~~~~H~~----~~~~~~~~~~--fl~ 313 (318)
T 1l7a_A 255 DRVKVPVLMSIGLIDKVTPPS-TVFAAYNHLETKKELKVYRYFGHEY----IPAFQTEKLA--FFK 313 (318)
T ss_dssp GGCCSCEEEEEETTCSSSCHH-HHHHHHHHCCSSEEEEEETTCCSSC----CHHHHHHHHH--HHH
T ss_pred hhCCCCEEEEeccCCCCCCcc-cHHHHHhhcCCCeeEEEccCCCCCC----cchhHHHHHH--HHH
Confidence 677899999999999999988 68888888875 7999999999993 3445556666 553
|
| >2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A | Back alignment and structure |
|---|
Probab=99.29 E-value=1.5e-11 Score=112.65 Aligned_cols=164 Identities=16% Similarity=0.168 Sum_probs=103.1
Q ss_pred CCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhC----CCceeEEEEecCCccccccccccccccccc
Q 013862 12 GHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARN----PDMDLVLILANPATSFRKSLLQTIMPIPAE 87 (435)
Q Consensus 12 ~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~----p~~v~~lVli~~~~~~~~~~~~~~~~~~~~ 87 (435)
.++++++++++.+.++.+.. .++++|+||||||.+|+.+|.++ +++|+++|++++........
T Consensus 140 ~~~~~~~a~~~~~~i~~~~~---~~p~~l~G~S~GG~vA~~~A~~l~~~~g~~v~~lvl~d~~~~~~~~~---------- 206 (319)
T 2hfk_A 140 PADLDTALDAQARAILRAAG---DAPVVLLGHAGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEP---------- 206 (319)
T ss_dssp ESSHHHHHHHHHHHHHHHHT---TSCEEEEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTSCHH----------
T ss_pred CCCHHHHHHHHHHHHHHhcC---CCCEEEEEECHHHHHHHHHHHHHHHhhCCCceEEEEeCCCCCCchhH----------
Confidence 47899999999999988753 26899999999999999999987 46799999999874321100
Q ss_pred cccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhh
Q 013862 88 LMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYAN 167 (435)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (435)
.......+. .+.. .. .... .....+.....+.... ..
T Consensus 207 -----~~~~~~~l~---------------------~~~~----~~--~~~~--------~~~~~~~~~~~~~~~~---~~ 243 (319)
T 2hfk_A 207 -----IEVWSRQLG---------------------EGLF----AG--ELEP--------MSDARLLAMGRYARFL---AG 243 (319)
T ss_dssp -----HHHTHHHHH---------------------HHHH----HT--CSSC--------CCHHHHHHHHHHHHHH---HS
T ss_pred -----HHHHHHHhh---------------------HHHH----Hh--hccc--------cchHHHHHHHHHHHHH---Hh
Confidence 000000000 0000 00 0000 0000000000000000 01
Q ss_pred hhcccccceEEEEeeCCCCCCCChhH-HHHHHhhCC-CceEEEeCCCCccccc-cCchhHHHHHhhcccccc
Q 013862 168 ARLDAVKAQTLILCSGRDQLLPSEEE-GDRLCRALP-NCQTRRFGGGGHFLFL-EDGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 168 ~~l~~i~~Pvlii~G~~D~~~~~~~~-~~~~~~~~~-~~~~~~i~~~gH~~~~-e~pe~~~~~I~~~~Fl~~ 236 (435)
.....+++|+++++| +|..++.. . ...+.+..+ +.+++.++ +||+.++ ++|+++++.|.+ |+.+
T Consensus 244 ~~~~~i~~Pvl~i~g-~D~~~~~~-~~~~~~~~~~~~~~~~~~v~-g~H~~~~~e~~~~~~~~i~~--~L~~ 310 (319)
T 2hfk_A 244 PRPGRSSAPVLLVRA-SEPLGDWQ-EERGDWRAHWDLPHTVADVP-GDHFTMMRDHAPAVAEAVLS--WLDA 310 (319)
T ss_dssp CCCCCCCSCEEEEEE-SSCSSCCC-GGGCCCSCCCSSCSEEEEES-SCTTHHHHTCHHHHHHHHHH--HHHH
T ss_pred CCCCCcCCCEEEEEc-CCCCCCcc-ccccchhhcCCCCCEEEEeC-CCcHHHHHHhHHHHHHHHHH--HHHh
Confidence 234678999999999 99988876 4 455556554 57999999 6999755 899999999999 8754
|
| >3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=1.1e-11 Score=110.95 Aligned_cols=65 Identities=14% Similarity=0.191 Sum_probs=43.8
Q ss_pred cccccceEEEEeeCCCCCCCChhHHHHHHhhC----CCceEEEeCCCCccccccC---------------chhHHHHHhh
Q 013862 170 LDAVKAQTLILCSGRDQLLPSEEEGDRLCRAL----PNCQTRRFGGGGHFLFLED---------------GVDLVTTIKG 230 (435)
Q Consensus 170 l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~----~~~~~~~i~~~gH~~~~e~---------------pe~~~~~I~~ 230 (435)
+..+.+|+|+++|++|.++|.+ ..+.+.+.+ .++++++++++||...... ++++.+.+.+
T Consensus 187 ~~~~~~P~lii~G~~D~~vp~~-~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (277)
T 3bxp_A 187 VTPASKPAFVWQTATDESVPPI-NSLKYVQAMLQHQVATAYHLFGSGIHGLALANHVTQKPGKDKYLNDQAAIWPQLALR 265 (277)
T ss_dssp CCTTSCCEEEEECTTCCCSCTH-HHHHHHHHHHHTTCCEEEEECCCC----------------CHHHHHHHHHHHHHHHH
T ss_pred cccCCCCEEEEeeCCCCccChH-HHHHHHHHHHHCCCeEEEEEeCCCCcccccccccccCccccccccchHHHHHHHHHH
Confidence 4556789999999999999988 577666654 3459999999999665544 3666777777
Q ss_pred ccccccc
Q 013862 231 AGYYRRG 237 (435)
Q Consensus 231 ~~Fl~~~ 237 (435)
|+++.
T Consensus 266 --fl~~~ 270 (277)
T 3bxp_A 266 --WLQEQ 270 (277)
T ss_dssp --HHHHT
T ss_pred --HHHhc
Confidence 66543
|
| >1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22 | Back alignment and structure |
|---|
Probab=99.27 E-value=7.6e-12 Score=108.74 Aligned_cols=170 Identities=18% Similarity=0.105 Sum_probs=99.1
Q ss_pred hHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCC---CceeEEEEecCCccccccccccccccccccccc
Q 013862 15 FTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNP---DMDLVLILANPATSFRKSLLQTIMPIPAELMSG 91 (435)
Q Consensus 15 ~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p---~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~ 91 (435)
..+.++++.++++.+.. .++++|+||||||.+|+.+|.+++ ++++++|++++......... . ......
T Consensus 53 ~~~~~~~~~~~i~~~~~---~~~~~l~G~S~Gg~ia~~~a~~~~~~~~~v~~lvl~~~~~~~~~~~~---~---~~~~~~ 123 (230)
T 1jmk_C 53 EEDRLDRYADLIQKLQP---EGPLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVSDL---D---GRTVES 123 (230)
T ss_dssp STTHHHHHHHHHHHHCC---SSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC--------------C
T ss_pred HHHHHHHHHHHHHHhCC---CCCeEEEEECHhHHHHHHHHHHHHHcCCCccEEEEECCCCCCccccc---c---cccHHH
Confidence 44667788888887754 358999999999999999998764 68999999997643211100 0 000000
Q ss_pred hhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhcc
Q 013862 92 QMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARLD 171 (435)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 171 (435)
. ...+... .. .. .......... .+. .....+.... .......
T Consensus 124 ~----~~~~~~~---~~------~~--~~~~~~~~~~---~~~-------------------~~~~~~~~~~-~~~~~~~ 165 (230)
T 1jmk_C 124 D----VEALMNV---NR------DN--EALNSEAVKH---GLK-------------------QKTHAFYSYY-VNLISTG 165 (230)
T ss_dssp C----HHHHHHH---TT------TC--SGGGSHHHHH---HHH-------------------HHHHHHHHHH-HHCCCCS
T ss_pred H----HHHHHhc---Ch------hh--hhhhhHHHHH---HHH-------------------HHHHHHHHHh-hhccccc
Confidence 0 0000000 00 00 0000000000 000 0000000000 0012456
Q ss_pred cccceEEEEeeCCCCCCCChhHHHHHHhhCC-CceEEEeCCCCc--cccccCchhHHHHHhhcccccc
Q 013862 172 AVKAQTLILCSGRDQLLPSEEEGDRLCRALP-NCQTRRFGGGGH--FLFLEDGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 172 ~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~i~~~gH--~~~~e~pe~~~~~I~~~~Fl~~ 236 (435)
.+++|+++++|++|..++.. ...+.+..+ +.+++.+++ || ++..++++.+++.|.+ |+..
T Consensus 166 ~~~~P~l~i~g~~D~~~~~~--~~~w~~~~~~~~~~~~i~g-~H~~~~~~~~~~~~~~~i~~--~l~~ 228 (230)
T 1jmk_C 166 QVKADIDLLTSGADFDIPEW--LASWEEATTGAYRMKRGFG-THAEMLQGETLDRNAGILLE--FLNT 228 (230)
T ss_dssp CBSSEEEEEECSSCCCCCTT--EECSGGGBSSCEEEEECSS-CGGGTTSHHHHHHHHHHHHH--HHTC
T ss_pred cccccEEEEEeCCCCCCccc--cchHHHhcCCCeEEEEecC-ChHHHcCcHhHHHHHHHHHH--HHhh
Confidence 78999999999999988743 444555543 579999996 99 8888899999999999 7764
|
| >1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A | Back alignment and structure |
|---|
Probab=99.26 E-value=1.2e-10 Score=104.00 Aligned_cols=57 Identities=18% Similarity=0.131 Sum_probs=44.5
Q ss_pred CChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCc-eeEEEEecCCc
Q 013862 13 HHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDM-DLVLILANPAT 71 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~-v~~lVli~~~~ 71 (435)
.++.+.++++.+.++.+... .++++||||||||.++..++.++|++ |+++|+++++.
T Consensus 59 ~~~~~~~~~~~~~l~~~~~l--~~~~~lvGhSmGG~ia~~~a~~~~~~~v~~lv~~~~p~ 116 (279)
T 1ei9_A 59 LNVNSQVTTVCQILAKDPKL--QQGYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQH 116 (279)
T ss_dssp SCHHHHHHHHHHHHHSCGGG--TTCEEEEEETTHHHHHHHHHHHCCSSCEEEEEEESCCT
T ss_pred cCHHHHHHHHHHHHHhhhhc--cCCEEEEEECHHHHHHHHHHHHcCCcccceEEEecCcc
Confidence 35666677776666653211 15899999999999999999999994 99999998753
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A | Back alignment and structure |
|---|
Probab=99.23 E-value=5.9e-11 Score=112.48 Aligned_cols=168 Identities=10% Similarity=0.021 Sum_probs=100.4
Q ss_pred CChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccccch
Q 013862 13 HHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQ 92 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (435)
.+.++++.++.+.+..+... ..++++|+||||||.+|+.+|..+|++++++|+++|.......... . ....+..
T Consensus 242 ~~~~~~~~~v~~~l~~~~~v-d~~~i~l~G~S~GG~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~----~-~~~~~~~ 315 (415)
T 3mve_A 242 EDYSRLHQAVLNELFSIPYV-DHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILGAPIHDIFASPQ----K-LQQMPKM 315 (415)
T ss_dssp SCTTHHHHHHHHHGGGCTTE-EEEEEEEEEETHHHHHHHHHHHHTTTTCCEEEEESCCCSHHHHCHH----H-HTTSCHH
T ss_pred CCHHHHHHHHHHHHHhCcCC-CCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEECCccccccccHH----H-HHHhHHH
Confidence 45677777777777665410 1258999999999999999999999999999999987421110000 0 0111110
Q ss_pred hHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhh--c
Q 013862 93 MTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANAR--L 170 (435)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l 170 (435)
............ ..... ...... ..+ ....... .
T Consensus 316 ----~~~~~~~~~g~~----------~~~~~----~~~~~~-----------------------~~~---~~~~~~~~~~ 351 (415)
T 3mve_A 316 ----YLDVLASRLGKS----------VVDIY----SLSGQM-----------------------AAW---SLKVQGFLSS 351 (415)
T ss_dssp ----HHHHHHHHTTCS----------SBCHH----HHHHHG-----------------------GGG---CTTTTTTTTS
T ss_pred ----HHHHHHHHhCCC----------ccCHH----HHHHHH-----------------------hhc---Cccccccccc
Confidence 000000000000 00000 000000 000 0000011 3
Q ss_pred ccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhcccccc
Q 013862 171 DAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 171 ~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~ 236 (435)
.++++|+|+++|++|.++|.. ..+.+.+..++++++++++..+ .+.++++.+.+.+ ||++
T Consensus 352 ~~i~~PvLii~G~~D~~vp~~-~~~~l~~~~~~~~l~~i~g~~~---h~~~~~~~~~i~~--fL~~ 411 (415)
T 3mve_A 352 RKTKVPILAMSLEGDPVSPYS-DNQMVAFFSTYGKAKKISSKTI---TQGYEQSLDLAIK--WLED 411 (415)
T ss_dssp SCBSSCEEEEEETTCSSSCHH-HHHHHHHTBTTCEEEEECCCSH---HHHHHHHHHHHHH--HHHH
T ss_pred CCCCCCEEEEEeCCCCCCCHH-HHHHHHHhCCCceEEEecCCCc---ccchHHHHHHHHH--HHHH
Confidence 578999999999999999998 6889999999999999998322 2366777888888 6653
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.23 E-value=6.4e-11 Score=119.64 Aligned_cols=161 Identities=17% Similarity=0.140 Sum_probs=100.9
Q ss_pred ChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccccchh
Q 013862 14 HFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQM 93 (435)
Q Consensus 14 s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (435)
+++++.+.+..++++... ..++++|+||||||.+++.++.. |++++++|+++|.......... ......
T Consensus 483 ~~~d~~~~~~~l~~~~~~--~~~~i~l~G~S~GG~~a~~~~~~-~~~~~~~v~~~~~~~~~~~~~~--------~~~~~~ 551 (662)
T 3azo_A 483 DVEDCAAVATALAEEGTA--DRARLAVRGGSAGGWTAASSLVS-TDVYACGTVLYPVLDLLGWADG--------GTHDFE 551 (662)
T ss_dssp HHHHHHHHHHHHHHTTSS--CTTCEEEEEETHHHHHHHHHHHH-CCCCSEEEEESCCCCHHHHHTT--------CSCGGG
T ss_pred cHHHHHHHHHHHHHcCCc--ChhhEEEEEECHHHHHHHHHHhC-cCceEEEEecCCccCHHHHhcc--------cccchh
Confidence 456666666666654221 23589999999999999998886 9999999999887432110000 000000
Q ss_pred HHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhcccc
Q 013862 94 TLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARLDAV 173 (435)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 173 (435)
.... ....... + +. .. . +.. ......+.++
T Consensus 552 ~~~~----~~~~~~~-------------~-~~----~~----------~----------------~~~--~sp~~~~~~~ 581 (662)
T 3azo_A 552 SRYL----DFLIGSF-------------E-EF----PE----------R----------------YRD--RAPLTRADRV 581 (662)
T ss_dssp TTHH----HHHTCCT-------------T-TC----HH----------H----------------HHH--TCGGGGGGGC
T ss_pred hHhH----HHHhCCC-------------c-cc----hh----------H----------------HHh--hChHhHhccC
Confidence 0000 0000000 0 00 00 0 000 0112345678
Q ss_pred cceEEEEeeCCCCCCCChhHHHHHHhhCCCc----eEEEeCCCCcccc-ccCchhHHHHHhhcccccccc
Q 013862 174 KAQTLILCSGRDQLLPSEEEGDRLCRALPNC----QTRRFGGGGHFLF-LEDGVDLVTTIKGAGYYRRGR 238 (435)
Q Consensus 174 ~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~----~~~~i~~~gH~~~-~e~pe~~~~~I~~~~Fl~~~~ 238 (435)
++|+|+++|++|..+|.. ..+.+.+.+++. ++++++++||.+. .++++++.+.+.+ |+.+..
T Consensus 582 ~~P~lii~G~~D~~vp~~-~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~--fl~~~l 648 (662)
T 3azo_A 582 RVPFLLLQGLEDPVCPPE-QCDRFLEAVAGCGVPHAYLSFEGEGHGFRRKETMVRALEAELS--LYAQVF 648 (662)
T ss_dssp CSCEEEEEETTCSSSCTH-HHHHHHHHHTTSCCCEEEEEETTCCSSCCSHHHHHHHHHHHHH--HHHHHT
T ss_pred CCCEEEEeeCCCCCCCHH-HHHHHHHHHHHcCCCEEEEEECCCCCCCCChHHHHHHHHHHHH--HHHHHh
Confidence 899999999999999999 688888877755 8999999999874 4677888899988 776543
|
| >4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A | Back alignment and structure |
|---|
Probab=99.23 E-value=4.6e-12 Score=115.15 Aligned_cols=156 Identities=15% Similarity=0.115 Sum_probs=100.8
Q ss_pred CCChHHHHHHHHHHHHHhhh---cCCCCCEEEEEeChhHHHHHHHHHhCC-------CceeEEEEecCCccccccccccc
Q 013862 12 GHHFTGLLKLIERTIRSENC---RSSNRPVYLVGESLGACLALAVAARNP-------DMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 12 ~~s~~~~a~dl~~~l~~l~~---~~~~~~~~lvGhS~Gg~va~~~a~~~p-------~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
..+..+..+|+.+.++.+.. ..+.++++|+||||||.+|+.++.+.+ ++++++|++++.........
T Consensus 125 ~~~~~~~~~d~~~~~~~l~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~p~~~~v~~~v~~~~~~~~~~~~~--- 201 (303)
T 4e15_A 125 QVTLEQLMTQFTHFLNWIFDYTEMTKVSSLTFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIFLCGVYDLRELSN--- 201 (303)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHGGGGGCTTTSCHHHHHTEEEEEEESCCCCCHHHHT---
T ss_pred CCChhHHHHHHHHHHHHHHHHhhhcCCCeEEEEeecHHHHHHHHHHhccccccCcccccccEEEEEeeeeccHhhhc---
Confidence 35677778888877777643 233468999999999999999998764 37999999998753211000
Q ss_pred cccccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhh
Q 013862 82 MPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKS 161 (435)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (435)
...... ... . ..... ... ...
T Consensus 202 ------~~~~~~--------~~~-----------~--~~~~~--------~~~-----------~~s------------- 222 (303)
T 4e15_A 202 ------LESVNP--------KNI-----------L--GLNER--------NIE-----------SVS------------- 222 (303)
T ss_dssp ------CTTTSG--------GGT-----------T--CCCTT--------TTT-----------TTC-------------
T ss_pred ------ccccch--------hhh-----------h--cCCHH--------HHH-----------HcC-------------
Confidence 000000 000 0 00000 000 000
Q ss_pred hhhhhhhhcc----cccceEEEEeeCCCCCCCChhHHHHHHhhCC----CceEEEeCCCCccccccCchhHHHHHhhccc
Q 013862 162 ASAYANARLD----AVKAQTLILCSGRDQLLPSEEEGDRLCRALP----NCQTRRFGGGGHFLFLEDGVDLVTTIKGAGY 233 (435)
Q Consensus 162 ~~~~~~~~l~----~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~----~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~F 233 (435)
.....+. .+++|+|+++|++|..++.. ..+.+.+.++ +.++++++++||+.++|++.+....+.+ |
T Consensus 223 ---p~~~~~~~~~~~~~~P~lii~G~~D~~v~~~-~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~l~~--~ 296 (303)
T 4e15_A 223 ---PMLWEYTDVTVWNSTKIYVVAAEHDSTTFIE-QSRHYADVLRKKGYKASFTLFKGYDHFDIIEETAIDDSDVSR--F 296 (303)
T ss_dssp ---GGGCCCCCGGGGTTSEEEEEEEEESCHHHHH-HHHHHHHHHHHHTCCEEEEEEEEEETTHHHHGGGSTTSHHHH--H
T ss_pred ---chhhcccccccCCCCCEEEEEeCCCCCCchH-HHHHHHHHHHHCCCceEEEEeCCCCchHHHHHHhCCCcHHHH--H
Confidence 0001122 34899999999999999888 6777777664 5699999999999999998887777777 5
Q ss_pred cc
Q 013862 234 YR 235 (435)
Q Consensus 234 l~ 235 (435)
+.
T Consensus 297 l~ 298 (303)
T 4e15_A 297 LR 298 (303)
T ss_dssp HH
T ss_pred HH
Confidence 53
|
| >2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=3.4e-11 Score=105.63 Aligned_cols=161 Identities=12% Similarity=-0.042 Sum_probs=97.7
Q ss_pred hHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhC---CCceeEEEEecCCccccccccccccccccccccc
Q 013862 15 FTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARN---PDMDLVLILANPATSFRKSLLQTIMPIPAELMSG 91 (435)
Q Consensus 15 ~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~---p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~ 91 (435)
.+++++++.+.++.+.. .++++|+||||||.+|+.+|.+. ++++.++|++++..... . +.....
T Consensus 59 ~~~~~~~~~~~i~~~~~---~~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~lvl~~~~~~~~--~--------~~~~~~ 125 (244)
T 2cb9_A 59 EDSRIEQYVSRITEIQP---EGPYVLLGYSAGGNLAFEVVQAMEQKGLEVSDFIIVDAYKKDQ--S--------ITADTE 125 (244)
T ss_dssp STTHHHHHHHHHHHHCS---SSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCCCS--C--------CCCC--
T ss_pred HHHHHHHHHHHHHHhCC---CCCEEEEEECHhHHHHHHHHHHHHHcCCCccEEEEEcCCCCcc--c--------cccccc
Confidence 45678888888887753 25899999999999999999876 67899999999774311 0 000000
Q ss_pred hhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhcc
Q 013862 92 QMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARLD 171 (435)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 171 (435)
........ .......+.... ..+.... .......
T Consensus 126 ------~~~~~~~~----------------~~~~~~~~~~~~-----------------------~~~~~~~-~~~~~~~ 159 (244)
T 2cb9_A 126 ------NDDSAAYL----------------PEAVRETVMQKK-----------------------RCYQEYW-AQLINEG 159 (244)
T ss_dssp -----------CCS----------------CHHHHHHHTHHH-----------------------HHHHHHH-HHCCCCS
T ss_pred ------HHHHHHHh----------------HHHHHHHHHHHH-----------------------HHHHHHH-HhhccCC
Confidence 00000000 000000000000 0000000 0012456
Q ss_pred cccceEEEEeeC--CCCCCCChhHHHHHHhhCC-CceEEEeCCCCc--cccccCchhHHHHHhhccccccccc
Q 013862 172 AVKAQTLILCSG--RDQLLPSEEEGDRLCRALP-NCQTRRFGGGGH--FLFLEDGVDLVTTIKGAGYYRRGRI 239 (435)
Q Consensus 172 ~i~~Pvlii~G~--~D~~~~~~~~~~~~~~~~~-~~~~~~i~~~gH--~~~~e~pe~~~~~I~~~~Fl~~~~~ 239 (435)
.+++|+++++|+ +|.. ++. ....+.+..+ +.+++.+++ || ++..++++++++.|.+ |+.+...
T Consensus 160 ~i~~Pvl~i~g~~~~D~~-~~~-~~~~w~~~~~~~~~~~~i~g-gH~~~~~~~~~~~~~~~i~~--~L~~~~~ 227 (244)
T 2cb9_A 160 RIKSNIHFIEAGIQTETS-GAM-VLQKWQDAAEEGYAEYTGYG-AHKDMLEGEFAEKNANIILN--ILDKINS 227 (244)
T ss_dssp CBSSEEEEEECSBCSCCC-HHH-HTTSSGGGBSSCEEEEECSS-BGGGTTSHHHHHHHHHHHHH--HHHTC--
T ss_pred CcCCCEEEEEccCccccc-ccc-chhHHHHhcCCCCEEEEecC-ChHHHcChHHHHHHHHHHHH--HHhcCcc
Confidence 789999999999 8873 333 3455556554 689999995 99 7777899999999999 8865443
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.21 E-value=4e-11 Score=122.80 Aligned_cols=149 Identities=15% Similarity=0.153 Sum_probs=100.5
Q ss_pred HHHHHHHHHHhhhcC--CCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccccchhHHH
Q 013862 19 LKLIERTIRSENCRS--SNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTLT 96 (435)
Q Consensus 19 a~dl~~~l~~l~~~~--~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (435)
.+|+.+.++.+.... ..++++|+||||||.+++.+|.++|++++++|+++|..... .... .
T Consensus 583 ~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~-------------~~~~----~ 645 (741)
T 2ecf_A 583 VADQLRGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKASDSYACGVAGAPVTDWG-------------LYDS----H 645 (741)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCGG-------------GSBH----H
T ss_pred HHHHHHHHHHHHhcCCCChhhEEEEEEChHHHHHHHHHHhCCCceEEEEEcCCCcchh-------------hhcc----c
Confidence 566666666664321 12589999999999999999999999999999999874321 0000 0
Q ss_pred HHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhcccccce
Q 013862 97 LSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARLDAVKAQ 176 (435)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 176 (435)
. .......+ .... ..+. .......+.++++|
T Consensus 646 ~---~~~~~~~~--------------~~~~----~~~~----------------------------~~~~~~~~~~i~~P 676 (741)
T 2ecf_A 646 Y---TERYMDLP--------------ARND----AGYR----------------------------EARVLTHIEGLRSP 676 (741)
T ss_dssp H---HHHHHCCT--------------GGGH----HHHH----------------------------HHCSGGGGGGCCSC
T ss_pred c---chhhcCCc--------------ccCh----hhhh----------------------------hcCHHHHHhhCCCC
Confidence 0 00000000 0000 0000 00112345678899
Q ss_pred EEEEeeCCCCCCCChhHHHHHHhhCCC----ceEEEeCCCCccccccCchhHHHHHhhcccccc
Q 013862 177 TLILCSGRDQLLPSEEEGDRLCRALPN----CQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 177 vlii~G~~D~~~~~~~~~~~~~~~~~~----~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~ 236 (435)
+|+++|++|..++.. ..+.+.+.+++ .++++++++||..+.+.++++.+.+.+ |+.+
T Consensus 677 ~lii~G~~D~~v~~~-~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~i~~--fl~~ 737 (741)
T 2ecf_A 677 LLLIHGMADDNVLFT-NSTSLMSALQKRGQPFELMTYPGAKHGLSGADALHRYRVAEA--FLGR 737 (741)
T ss_dssp EEEEEETTCSSSCTH-HHHHHHHHHHHTTCCCEEEEETTCCSSCCHHHHHHHHHHHHH--HHHH
T ss_pred EEEEccCCCCCCCHH-HHHHHHHHHHHCCCceEEEEECCCCCCCCCCchhHHHHHHHH--HHHH
Confidence 999999999999998 67777776543 489999999999998888889999998 7753
|
| >2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.19 E-value=9.3e-10 Score=98.24 Aligned_cols=194 Identities=12% Similarity=0.117 Sum_probs=103.8
Q ss_pred CCChHHHHHHHHHHHHHhhhcCC-CCCEEEEEeChhHHHHHHHHH---hCCCceeEEEEecCCccccccccccccccccc
Q 013862 12 GHHFTGLLKLIERTIRSENCRSS-NRPVYLVGESLGACLALAVAA---RNPDMDLVLILANPATSFRKSLLQTIMPIPAE 87 (435)
Q Consensus 12 ~~s~~~~a~dl~~~l~~l~~~~~-~~~~~lvGhS~Gg~va~~~a~---~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~ 87 (435)
..++.+.++|+.+.++.+..... .++++|+|+|+||.+|+.++. .++++++++|++.+............. . ..
T Consensus 71 e~~~p~~~~D~~~al~~l~~~~~~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~-~-~~ 148 (274)
T 2qru_A 71 NTKIDHILRTLTETFQLLNEEIIQNQSFGLCGRSAGGYLMLQLTKQLQTLNLTPQFLVNFYGYTDLEFIKEPRKL-L-KQ 148 (274)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHTTTTCCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCSCSGGGGSCCCS-C-SS
T ss_pred CCCCcHHHHHHHHHHHHHHhccccCCcEEEEEECHHHHHHHHHHHHHhcCCCCceEEEEEcccccccccCCchhh-c-cc
Confidence 35788899999999988864322 368999999999999999997 468889999988775431111000000 0 00
Q ss_pred cccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhh
Q 013862 88 LMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYAN 167 (435)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (435)
...... .... ...... ........ ....... ....... .+......... .... . ..
T Consensus 149 ~~~~~~---~~~~---~~~~~~------~~~~~~~~-~~~~~~~--~~~~~~~-~~~~~~~~~~~-~~~~-~------~~ 204 (274)
T 2qru_A 149 AISAKE---IAAI---DQTKPV------WDDPFLSR-YLLYHYS--IQQALLP-HFYGLPENGDW-SAYA-L------SD 204 (274)
T ss_dssp CCCSGG---GTTS---CCSSCC------SCCTTCTT-HHHHHHH--HHTTCHH-HHHTCCTTSCC-GGGC-C------CH
T ss_pred cccHHH---Hhhh---cccCCC------CCCccccc-hhhhhhh--hhhcchh-hccCccccccc-ccCC-C------Ch
Confidence 000000 0000 000000 00000000 0000000 0000000 00000000000 0000 0 01
Q ss_pred hhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchh----HHHHHhhccccc
Q 013862 168 ARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVD----LVTTIKGAGYYR 235 (435)
Q Consensus 168 ~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~----~~~~I~~~~Fl~ 235 (435)
..+..+ .|+++++|++|..++.. .++++.+..++++++++++++|.++.+.+.. +.+.+.+ |++
T Consensus 205 ~~l~~l-pP~li~~G~~D~~~~~~-~~~~l~~~~~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~--fl~ 272 (274)
T 2qru_A 205 ETLKTF-PPCFSTASSSDEEVPFR-YSKKIGRTIPESTFKAVYYLEHDFLKQTKDPSVITLFEQLDS--WLK 272 (274)
T ss_dssp HHHHTS-CCEEEEEETTCSSSCTH-HHHHHHHHSTTCEEEEECSCCSCGGGGTTSHHHHHHHHHHHH--HHH
T ss_pred hhhcCC-CCEEEEEecCCCCcCHH-HHHHHHHhCCCcEEEEcCCCCcCCccCcCCHHHHHHHHHHHH--HHh
Confidence 234455 79999999999999888 6888999999999999999999988775543 3555555 654
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.15 E-value=2e-10 Score=116.77 Aligned_cols=161 Identities=12% Similarity=0.102 Sum_probs=99.2
Q ss_pred hHHHHHHHHHHHHHhhhcC--CCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccccch
Q 013862 15 FTGLLKLIERTIRSENCRS--SNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQ 92 (435)
Q Consensus 15 ~~~~a~dl~~~l~~l~~~~--~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (435)
.....+|+.+.++.+.... ..+++.++|||+||++++.++.++|++++++|+.+|........ .....
T Consensus 502 ~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~----------~~~~~ 571 (695)
T 2bkl_A 502 KQNVFDDFHAAAEYLVQQKYTQPKRLAIYGGSNGGLLVGAAMTQRPELYGAVVCAVPLLDMVRYH----------LFGSG 571 (695)
T ss_dssp THHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGG----------GSTTG
T ss_pred CCCcHHHHHHHHHHHHHcCCCCcccEEEEEECHHHHHHHHHHHhCCcceEEEEEcCCccchhhcc----------ccCCC
Confidence 3455677777777764321 13589999999999999999999999999999998875322100 00000
Q ss_pred hHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhccc
Q 013862 93 MTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARLDA 172 (435)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 172 (435)
.. ... .+ +.+ .. . .....+. .. .....+..
T Consensus 572 ~~-~~~----~~-g~~-----------~~-~----~~~~~~~--------------------------~~--sp~~~~~~ 601 (695)
T 2bkl_A 572 RT-WIP----EY-GTA-----------EK-P----EDFKTLH--------------------------AY--SPYHHVRP 601 (695)
T ss_dssp GG-GHH----HH-CCT-----------TS-H----HHHHHHH--------------------------HH--CGGGCCCS
T ss_pred cc-hHH----Hh-CCC-----------CC-H----HHHHHHH--------------------------hc--ChHhhhhh
Confidence 00 000 00 000 00 0 0000000 00 01123344
Q ss_pred cc--ceEEEEeeCCCCCCCChhHHHHHHhhCCC-------ceEEEeCCCCcccc--ccCchhHHHHHhhcccccccc
Q 013862 173 VK--AQTLILCSGRDQLLPSEEEGDRLCRALPN-------CQTRRFGGGGHFLF--LEDGVDLVTTIKGAGYYRRGR 238 (435)
Q Consensus 173 i~--~Pvlii~G~~D~~~~~~~~~~~~~~~~~~-------~~~~~i~~~gH~~~--~e~pe~~~~~I~~~~Fl~~~~ 238 (435)
++ .|+|+++|++|..+++. ...++.+.++. .++++++++||... .+++.+..+.+.+ ||.+..
T Consensus 602 ~~~~~P~Li~~G~~D~~v~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~--fl~~~l 675 (695)
T 2bkl_A 602 DVRYPALLMMAADHDDRVDPM-HARKFVAAVQNSPGNPATALLRIEANAGHGGADQVAKAIESSVDLYS--FLFQVL 675 (695)
T ss_dssp SCCCCEEEEEEETTCSSSCTH-HHHHHHHHHHTSTTCCSCEEEEEETTCBTTBCSCHHHHHHHHHHHHH--HHHHHT
T ss_pred cCCCCCEEEEeeCCCCCCChH-HHHHHHHHHHhhccCCCCEEEEEeCCCCcCCCCCHHHHHHHHHHHHH--HHHHHc
Confidence 44 69999999999999998 67777766533 68999999999973 3456667777777 776543
|
| >4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=99.15 E-value=1.4e-10 Score=99.10 Aligned_cols=128 Identities=16% Similarity=0.196 Sum_probs=87.2
Q ss_pred ChHHHHHHHHHHHHHhhhc-CCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccccch
Q 013862 14 HFTGLLKLIERTIRSENCR-SSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQ 92 (435)
Q Consensus 14 s~~~~a~dl~~~l~~l~~~-~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (435)
.+++..+.+..+++.+... .+.++++|+|+|+||.+|+.++.++|++++++|.+++....... ..
T Consensus 77 ~~~~~~~~i~~~~~~~~~~~i~~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~vv~~sg~l~~~~~-------------~~- 142 (210)
T 4h0c_A 77 ALDSALALVGEVVAEIEAQGIPAEQIYFAGFSQGACLTLEYTTRNARKYGGIIAFTGGLIGQEL-------------AI- 142 (210)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHTBSCCSEEEEETCCCCSSSC-------------CG-
T ss_pred HHHHHHHHHHHHHHHHHHhCCChhhEEEEEcCCCcchHHHHHHhCcccCCEEEEecCCCCChhh-------------hh-
Confidence 4556666677776665432 12468999999999999999999999999999988765211000 00
Q ss_pred hHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhccc
Q 013862 93 MTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARLDA 172 (435)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 172 (435)
.. .....
T Consensus 143 --------------------------------------~~-----------------------------------~~~~~ 149 (210)
T 4h0c_A 143 --------------------------------------GN-----------------------------------YKGDF 149 (210)
T ss_dssp --------------------------------------GG-----------------------------------CCBCC
T ss_pred --------------------------------------hh-----------------------------------hhhhc
Confidence 00 00001
Q ss_pred ccceEEEEeeCCCCCCCChhHHHHHHhhC----CCceEEEeCCCCccccccCchhHHHHHhhccccc
Q 013862 173 VKAQTLILCSGRDQLLPSEEEGDRLCRAL----PNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYR 235 (435)
Q Consensus 173 i~~Pvlii~G~~D~~~~~~~~~~~~~~~~----~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~ 235 (435)
.++|+++++|++|+++|.+ ..+++.+.+ .+.+++++|+.||.+. ++++ +.|.+ ||.
T Consensus 150 ~~~Pvl~~hG~~D~~vp~~-~~~~~~~~L~~~g~~v~~~~ypg~gH~i~---~~el-~~i~~--wL~ 209 (210)
T 4h0c_A 150 KQTPVFISTGNPDPHVPVS-RVQESVTILEDMNAAVSQVVYPGRPHTIS---GDEI-QLVNN--TIL 209 (210)
T ss_dssp TTCEEEEEEEESCTTSCHH-HHHHHHHHHHHTTCEEEEEEEETCCSSCC---HHHH-HHHHH--TTT
T ss_pred cCCceEEEecCCCCccCHH-HHHHHHHHHHHCCCCeEEEEECCCCCCcC---HHHH-HHHHH--HHc
Confidence 1469999999999999998 566655443 3568999999999864 4444 45666 554
|
| >2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon} | Back alignment and structure |
|---|
Probab=99.14 E-value=7.2e-11 Score=107.58 Aligned_cols=64 Identities=17% Similarity=0.214 Sum_probs=47.4
Q ss_pred cccccceEEEEeeCCCCCCCChh-HHHHHHhhCCCceEEEeCCCCcccc-----ccCchhHHHHHhhcccccc
Q 013862 170 LDAVKAQTLILCSGRDQLLPSEE-EGDRLCRALPNCQTRRFGGGGHFLF-----LEDGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 170 l~~i~~Pvlii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~-----~e~pe~~~~~I~~~~Fl~~ 236 (435)
+..+. |+++++|++|.+++... ..+.+.+...+.+++++++++|... .++++++.+.+.+ |+++
T Consensus 237 l~~~~-P~lii~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~--fl~~ 306 (311)
T 2c7b_A 237 LGGLP-PALVVTAEYDPLRDEGELYAYKMKASGSRAVAVRFAGMVHGFVSFYPFVDAGREALDLAAA--SIRS 306 (311)
T ss_dssp CTTCC-CEEEEEETTCTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHH--HHHH
T ss_pred ccCCC-cceEEEcCCCCchHHHHHHHHHHHHCCCCEEEEEeCCCccccccccccCHHHHHHHHHHHH--HHHH
Confidence 34444 99999999999886431 1244555666789999999999876 4566888888888 7754
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.13 E-value=7.9e-11 Score=120.21 Aligned_cols=151 Identities=15% Similarity=0.137 Sum_probs=98.7
Q ss_pred HHHHHHHHHHHhhhcC--CCCCEEEEEeChhHHHHHHHHHhC----CCceeEEEEecCCccccccccccccccccccccc
Q 013862 18 LLKLIERTIRSENCRS--SNRPVYLVGESLGACLALAVAARN----PDMDLVLILANPATSFRKSLLQTIMPIPAELMSG 91 (435)
Q Consensus 18 ~a~dl~~~l~~l~~~~--~~~~~~lvGhS~Gg~va~~~a~~~----p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~ 91 (435)
..+|+.+.++.+.... ..++++|+||||||.+++.+|.++ |++++++|++++..... ....
T Consensus 558 ~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~v~~~~~~~~~-------------~~~~ 624 (723)
T 1xfd_A 558 EEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFK-------------LYAS 624 (723)
T ss_dssp HHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTT-------------SSBH
T ss_pred cHHHHHHHHHHHHhCCCcChhhEEEEEECHHHHHHHHHHHhccccCCCeEEEEEEccCCcchH-------------Hhhh
Confidence 3455555555553321 124799999999999999999999 99999999998874311 0000
Q ss_pred hhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhcc
Q 013862 92 QMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARLD 171 (435)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 171 (435)
. .... ....+ .. .. ..... ......+.
T Consensus 625 ~---~~~~----~~~~~-----------~~--------------~~-------~~~~~--------------~~~~~~~~ 651 (723)
T 1xfd_A 625 A---FSER----YLGLH-----------GL--------------DN-------RAYEM--------------TKVAHRVS 651 (723)
T ss_dssp H---HHHH----HHCCC-----------SS--------------CC-------SSTTT--------------TCTHHHHT
T ss_pred h---ccHh----hcCCc-----------cC--------------Ch-------hHHHh--------------cChhhHHh
Confidence 0 0000 00000 00 00 00000 00113455
Q ss_pred ccc-ceEEEEeeCCCCCCCChhHHHHHHhhC----CCceEEEeCCCCccc-cccCchhHHHHHhhccccccc
Q 013862 172 AVK-AQTLILCSGRDQLLPSEEEGDRLCRAL----PNCQTRRFGGGGHFL-FLEDGVDLVTTIKGAGYYRRG 237 (435)
Q Consensus 172 ~i~-~Pvlii~G~~D~~~~~~~~~~~~~~~~----~~~~~~~i~~~gH~~-~~e~pe~~~~~I~~~~Fl~~~ 237 (435)
+++ +|+|+++|++|..+|.. ..+.+.+.+ .+.++++++++||.+ ..++++++.+.+.+ |+.+.
T Consensus 652 ~~~~~P~lii~G~~D~~v~~~-~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~--fl~~~ 720 (723)
T 1xfd_A 652 ALEEQQFLIIHPTADEKIHFQ-HTAELITQLIRGKANYSLQIYPDESHYFTSSSLKQHLYRSIIN--FFVEC 720 (723)
T ss_dssp SCCSCEEEEEEETTCSSSCHH-HHHHHHHHHHHTTCCCEEEEETTCCSSCCCHHHHHHHHHHHHH--HHTTT
T ss_pred hcCCCCEEEEEeCCCCCcCHh-HHHHHHHHHHHCCCCeEEEEECCCCcccccCcchHHHHHHHHH--HHHHH
Confidence 677 89999999999999988 577666654 467999999999998 67789999999999 87643
|
| >3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A | Back alignment and structure |
|---|
Probab=99.12 E-value=4.2e-10 Score=103.03 Aligned_cols=59 Identities=19% Similarity=0.167 Sum_probs=43.4
Q ss_pred eEEEEeeCCCCCCCCh-hHHHHHHhhCCCceEEEeCCCCcccccc-----CchhHHHHHhhcccccc
Q 013862 176 QTLILCSGRDQLLPSE-EEGDRLCRALPNCQTRRFGGGGHFLFLE-----DGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 176 Pvlii~G~~D~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e-----~pe~~~~~I~~~~Fl~~ 236 (435)
|+|+++|++|.+++.. ...+.+.+...+++++++++++|..... .++++.+.+.+ |+++
T Consensus 254 P~lii~G~~D~l~~~~~~~a~~l~~ag~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~--fl~~ 318 (323)
T 3ain_A 254 PALIITAEHDPLRDQGEAYANKLLQSGVQVTSVGFNNVIHGFVSFFPFIEQGRDAIGLIGY--VLRK 318 (323)
T ss_dssp CEEEEEETTCTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHH--HHHH
T ss_pred HHHEEECCCCccHHHHHHHHHHHHHcCCCEEEEEECCCccccccccCcCHHHHHHHHHHHH--HHHH
Confidence 9999999999987421 1233444444577999999999998764 45788888888 7653
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.12 E-value=2.9e-10 Score=116.35 Aligned_cols=153 Identities=13% Similarity=0.159 Sum_probs=99.3
Q ss_pred HHHHHHHHHHhhhcC--CCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccccchhHHH
Q 013862 19 LKLIERTIRSENCRS--SNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTLT 96 (435)
Q Consensus 19 a~dl~~~l~~l~~~~--~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (435)
.+|+.+.++.+.... ..+++.|+||||||.+|+.+|.++|++++++|+++|..... ..... .
T Consensus 565 ~~D~~~~i~~l~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~-------------~~~~~---~ 628 (740)
T 4a5s_A 565 VEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWE-------------YYDSV---Y 628 (740)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCCGG-------------GSBHH---H
T ss_pred HHHHHHHHHHHHhcCCcCCccEEEEEECHHHHHHHHHHHhCCCceeEEEEcCCccchH-------------HhhhH---H
Confidence 556666666654321 12579999999999999999999999999999998875311 00000 0
Q ss_pred HHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhcccccc-
Q 013862 97 LSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARLDAVKA- 175 (435)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~- 175 (435)
... ....+ ...... ..+. . ......+.++++
T Consensus 629 ~~~----~~~~p------------~~~~~~----~~~~----------~------------------~~~~~~~~~i~~~ 660 (740)
T 4a5s_A 629 TER----YMGLP------------TPEDNL----DHYR----------N------------------STVMSRAENFKQV 660 (740)
T ss_dssp HHH----HHCCS------------STTTTH----HHHH----------H------------------SCSGGGGGGGGGS
T ss_pred HHH----HcCCC------------CccccH----HHHH----------h------------------CCHHHHHhcCCCC
Confidence 000 00000 000000 0000 0 001134556776
Q ss_pred eEEEEeeCCCCCCCChhHHHHHHhhC----CCceEEEeCCCCccc-cccCchhHHHHHhhcccccccc
Q 013862 176 QTLILCSGRDQLLPSEEEGDRLCRAL----PNCQTRRFGGGGHFL-FLEDGVDLVTTIKGAGYYRRGR 238 (435)
Q Consensus 176 Pvlii~G~~D~~~~~~~~~~~~~~~~----~~~~~~~i~~~gH~~-~~e~pe~~~~~I~~~~Fl~~~~ 238 (435)
|+|+++|++|..++.. ....+.+.+ ...++++++++||.+ ..+.++++.+.+.+ ||.+.-
T Consensus 661 P~Lii~G~~D~~v~~~-~~~~l~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~--fl~~~l 725 (740)
T 4a5s_A 661 EYLLIHGTADDNVHFQ-QSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSH--FIKQCF 725 (740)
T ss_dssp EEEEEEETTCSSSCTH-HHHHHHHHHHHTTCCCEEEEETTCCTTCCSHHHHHHHHHHHHH--HHHHHT
T ss_pred cEEEEEcCCCCccCHH-HHHHHHHHHHHCCCCeEEEEECCCCCcCCCCccHHHHHHHHHH--HHHHHc
Confidence 9999999999999998 577666654 356899999999998 66788999999999 886543
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.12 E-value=2.5e-10 Score=116.45 Aligned_cols=153 Identities=14% Similarity=0.153 Sum_probs=100.1
Q ss_pred HHHHHHHHHHHHhhhcC--CCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccccchhH
Q 013862 17 GLLKLIERTIRSENCRS--SNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMT 94 (435)
Q Consensus 17 ~~a~dl~~~l~~l~~~~--~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (435)
...+|+.+.++.+.... ..++++|+||||||.+++.+|.++|++++++|+++|..... .....
T Consensus 557 ~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~-------------~~~~~-- 621 (719)
T 1z68_A 557 YEVEDQITAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLALASGTGLFKCGIAVAPVSSWE-------------YYASV-- 621 (719)
T ss_dssp HHHHHHHHHHHHHHTTSCEEEEEEEEEEETHHHHHHHHHHTTSSSCCSEEEEESCCCCTT-------------TSBHH--
T ss_pred ccHHHHHHHHHHHHhcCCCCCceEEEEEECHHHHHHHHHHHhCCCceEEEEEcCCccChH-------------Hhccc--
Confidence 34567677776664421 12579999999999999999999999999999998875311 00000
Q ss_pred HHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhccccc
Q 013862 95 LTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARLDAVK 174 (435)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 174 (435)
.... ....+ .. .+.. ..+. . ......+.+++
T Consensus 622 -~~~~----~~g~~-----------~~-~~~~----~~~~----------~------------------~~~~~~~~~~~ 652 (719)
T 1z68_A 622 -YTER----FMGLP-----------TK-DDNL----EHYK----------N------------------STVMARAEYFR 652 (719)
T ss_dssp -HHHH----HHCCS-----------ST-TTTH----HHHH----------H------------------TCSGGGGGGGT
T ss_pred -cchh----hcCCc-----------cc-ccch----hhhh----------h------------------CCHhHHHhcCC
Confidence 0000 00000 00 0000 0000 0 00113455677
Q ss_pred c-eEEEEeeCCCCCCCChhHHHHHHhhCC----CceEEEeCCCCccccccCchhHHHHHhhcccccc
Q 013862 175 A-QTLILCSGRDQLLPSEEEGDRLCRALP----NCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 175 ~-Pvlii~G~~D~~~~~~~~~~~~~~~~~----~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~ 236 (435)
+ |+|+++|++|..++.. ..+.+.+.++ ..++++++++||....++++++.+.+.+ |+.+
T Consensus 653 ~~P~li~~G~~D~~v~~~-~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~--fl~~ 716 (719)
T 1z68_A 653 NVDYLLIHGTADDNVHFQ-NSAQIAKALVNAQVDFQAMWYSDQNHGLSGLSTNHLYTHMTH--FLKQ 716 (719)
T ss_dssp TSEEEEEEETTCSSSCTH-HHHHHHHHHHHTTCCCEEEEETTCCTTCCTHHHHHHHHHHHH--HHHH
T ss_pred CCcEEEEEeCCCCCcCHH-HHHHHHHHHHHCCCceEEEEECcCCCCCCcccHHHHHHHHHH--HHHH
Confidence 7 8999999999999998 6777776543 4579999999999977788999999998 7753
|
| >3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A | Back alignment and structure |
|---|
Probab=99.11 E-value=3.6e-10 Score=106.07 Aligned_cols=54 Identities=17% Similarity=0.284 Sum_probs=41.5
Q ss_pred hHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCC
Q 013862 15 FTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPA 70 (435)
Q Consensus 15 ~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~ 70 (435)
.++..+.+..+++..+.. .+++.|+||||||.+++.++.++|++++++|++++.
T Consensus 244 ~~d~~~~i~~~~~~~~~d--~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~sg~ 297 (380)
T 3doh_A 244 LLAVIKIIRKLLDEYNID--ENRIYITGLSMGGYGTWTAIMEFPELFAAAIPICGG 297 (380)
T ss_dssp HHHHHHHHHHHHHHSCEE--EEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCC
T ss_pred HHHHHHHHHHHHHhcCCC--cCcEEEEEECccHHHHHHHHHhCCccceEEEEecCC
Confidence 444455555555544431 247999999999999999999999999999999877
|
| >3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A | Back alignment and structure |
|---|
Probab=99.10 E-value=4.7e-10 Score=102.75 Aligned_cols=59 Identities=17% Similarity=0.189 Sum_probs=44.4
Q ss_pred ChHHHHHHHHHHHHHhhhc-CCCCCEEEEEeChhHHHHHHHHHhCCCc----eeEEEEecCCcc
Q 013862 14 HFTGLLKLIERTIRSENCR-SSNRPVYLVGESLGACLALAVAARNPDM----DLVLILANPATS 72 (435)
Q Consensus 14 s~~~~a~dl~~~l~~l~~~-~~~~~~~lvGhS~Gg~va~~~a~~~p~~----v~~lVli~~~~~ 72 (435)
.+....+|+.+.++.+... ...++++|+|||+||.+|+.+|.++|++ ++++|+++|...
T Consensus 126 ~~~~~~~d~~~a~~~l~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~ 189 (322)
T 3k6k_A 126 PFPAAVDDCVAAYRALLKTAGSADRIIIAGDSAGGGLTTASMLKAKEDGLPMPAGLVMLSPFVD 189 (322)
T ss_dssp CTTHHHHHHHHHHHHHHHHHSSGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCC
T ss_pred CCchHHHHHHHHHHHHHHcCCCCccEEEEecCccHHHHHHHHHHHHhcCCCCceEEEEecCCcC
Confidence 3445556666665555332 2346899999999999999999988776 999999998754
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.08 E-value=4.8e-10 Score=114.18 Aligned_cols=157 Identities=12% Similarity=0.035 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHhhhc--CCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccccchhHH
Q 013862 18 LLKLIERTIRSENCR--SSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTL 95 (435)
Q Consensus 18 ~a~dl~~~l~~l~~~--~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (435)
..+|+.+.++.+... ...+++.++|||+||++++.++.++|++++++|+.+|......... . .....
T Consensus 526 ~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~a~~~p~~~~~~v~~~~~~d~~~~~~-----~---~~~~~--- 594 (710)
T 2xdw_A 526 CFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHK-----Y---TIGHA--- 594 (710)
T ss_dssp HHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGG-----S---TTGGG---
T ss_pred hHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHHhCccceeEEEEcCCcccHhhccc-----c---CCChh---
Confidence 345555555555332 1235899999999999999999999999999999988753211100 0 00000
Q ss_pred HHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhcc----
Q 013862 96 TLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARLD---- 171 (435)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---- 171 (435)
.... . ..+ .. .+ ....+.. . .....+.
T Consensus 595 ~~~~----~-g~~-----------~~-~~----~~~~~~~--------------------------~--sp~~~~~~~~~ 625 (710)
T 2xdw_A 595 WTTD----Y-GCS-----------DS-KQ----HFEWLIK--------------------------Y--SPLHNVKLPEA 625 (710)
T ss_dssp GHHH----H-CCT-----------TS-HH----HHHHHHH--------------------------H--CGGGCCCCCSS
T ss_pred HHHh----C-CCC-----------CC-HH----HHHHHHH--------------------------h--CcHhhhccccc
Confidence 0000 0 000 00 00 0000000 0 0012233
Q ss_pred -cccc-eEEEEeeCCCCCCCChhHHHHHHhhCCC-----------ceEEEeCCCCcccccc--CchhHHHHHhhcccccc
Q 013862 172 -AVKA-QTLILCSGRDQLLPSEEEGDRLCRALPN-----------CQTRRFGGGGHFLFLE--DGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 172 -~i~~-Pvlii~G~~D~~~~~~~~~~~~~~~~~~-----------~~~~~i~~~gH~~~~e--~pe~~~~~I~~~~Fl~~ 236 (435)
.+++ |+|+++|++|..+++. ...++.+.++. .++++++++||..... ++.++.+.+.+ ||.+
T Consensus 626 ~~~~~pP~Li~~G~~D~~v~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~--fl~~ 702 (710)
T 2xdw_A 626 DDIQYPSMLLLTADHDDRVVPL-HSLKFIATLQYIVGRSRKQNNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFA--FIAR 702 (710)
T ss_dssp TTCCCCEEEEEEETTCCSSCTH-HHHHHHHHHHHHTTTSTTCCSCEEEEEESSCCSSTTCCHHHHHHHHHHHHH--HHHH
T ss_pred ccCCCCcEEEEEeCCCCccChh-HHHHHHHHHHhhhccccCCCcCEEEEEeCCCCcCCCCCHHHHHHHHHHHHH--HHHH
Confidence 5777 9999999999999998 57776665443 3899999999998763 34567777777 7754
Q ss_pred c
Q 013862 237 G 237 (435)
Q Consensus 237 ~ 237 (435)
.
T Consensus 703 ~ 703 (710)
T 2xdw_A 703 C 703 (710)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.07 E-value=3.5e-10 Score=99.00 Aligned_cols=62 Identities=18% Similarity=0.213 Sum_probs=49.1
Q ss_pred cccccceEEEEeeCCCCCCCChhHHHHHHhhCCCc-------eEEEeCCCCccccccCchhHHHHHhhcccccc
Q 013862 170 LDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNC-------QTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 170 l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~-------~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~ 236 (435)
+.++++|+++++|++|.++|.+ ..+.+.+.+++. ...+++++||++..+ +.+.+.|.+ |+++
T Consensus 168 ~~~~~~P~l~i~G~~D~~vp~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~gH~~~~~--~~~~~~i~~--fl~~ 236 (243)
T 1ycd_A 168 KPDMKTKMIFIYGASDQAVPSV-RSKYLYDIYLKAQNGNKEKVLAYEHPGGHMVPNK--KDIIRPIVE--QITS 236 (243)
T ss_dssp CTTCCCEEEEEEETTCSSSCHH-HHHHHHHHHHHHTTTCTTTEEEEEESSSSSCCCC--HHHHHHHHH--HHHH
T ss_pred cccCCCCEEEEEeCCCCccCHH-HHHHHHHHhhhhccccccccEEEecCCCCcCCch--HHHHHHHHH--HHHH
Confidence 4567899999999999999998 688887776543 566777889998765 358888888 7754
|
| >2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A | Back alignment and structure |
|---|
Probab=99.07 E-value=1.3e-10 Score=105.76 Aligned_cols=60 Identities=18% Similarity=0.206 Sum_probs=45.8
Q ss_pred CChHHHHHHHHHHHHHhhhcC-----CCCCEEEEEeChhHHHHHHHHHhCCC----ceeEEEEecCCcc
Q 013862 13 HHFTGLLKLIERTIRSENCRS-----SNRPVYLVGESLGACLALAVAARNPD----MDLVLILANPATS 72 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~~-----~~~~~~lvGhS~Gg~va~~~a~~~p~----~v~~lVli~~~~~ 72 (435)
+++....+|+.++++.+.... ..++++|+||||||.+|+.+|.++|+ +++++|+++|...
T Consensus 119 ~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~v~~~vl~~p~~~ 187 (310)
T 2hm7_A 119 HKFPAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTG 187 (310)
T ss_dssp SCTTHHHHHHHHHHHHHHHTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCCCEEEESCCCC
T ss_pred CCCCccHHHHHHHHHHHHhhHHHhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCceEEEEEcCCcC
Confidence 455566777777776653321 12579999999999999999998876 6999999998754
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.07 E-value=5.6e-10 Score=114.23 Aligned_cols=157 Identities=12% Similarity=0.019 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHhhhc--CCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccccchhHH
Q 013862 18 LLKLIERTIRSENCR--SSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTL 95 (435)
Q Consensus 18 ~a~dl~~~l~~l~~~--~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (435)
..+|+.+.++.+... ...+++.++|||+||++++.++.++|++++++|+.+|......... . . .....
T Consensus 547 ~~~D~~~~~~~l~~~~~~~~~ri~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~-----~--~-~~~~~-- 616 (741)
T 1yr2_A 547 VFDDFIAAGEWLIANGVTPRHGLAIEGGSNGGLLIGAVTNQRPDLFAAASPAVGVMDMLRFDQ-----F--T-AGRYW-- 616 (741)
T ss_dssp HHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTSGGG-----S--T-TGGGG--
T ss_pred cHHHHHHHHHHHHHcCCCChHHEEEEEECHHHHHHHHHHHhCchhheEEEecCCccccccccC-----C--C-CCchh--
Confidence 345555555555332 1235899999999999999999999999999999988753211000 0 0 00000
Q ss_pred HHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhccc-cc
Q 013862 96 TLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARLDA-VK 174 (435)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~ 174 (435)
.. .. +.+ .. . +....+. . . .....+.. ++
T Consensus 617 -~~----~~-g~~-----------~~-~----~~~~~~~----------~-~-----------------sp~~~~~~~~~ 646 (741)
T 1yr2_A 617 -VD----DY-GYP-----------EK-E----ADWRVLR----------R-Y-----------------SPYHNVRSGVD 646 (741)
T ss_dssp -HH----HH-CCT-----------TS-H----HHHHHHH----------T-T-----------------CGGGCCCTTSC
T ss_pred -HH----Hc-CCC-----------CC-H----HHHHHHH----------H-c-----------------CchhhhhccCC
Confidence 00 00 000 00 0 0000000 0 0 01123444 67
Q ss_pred c-eEEEEeeCCCCCCCChhHHHHHHhhCCC-------ceEEEeCCCCccccccC--chhHHHHHhhccccccc
Q 013862 175 A-QTLILCSGRDQLLPSEEEGDRLCRALPN-------CQTRRFGGGGHFLFLED--GVDLVTTIKGAGYYRRG 237 (435)
Q Consensus 175 ~-Pvlii~G~~D~~~~~~~~~~~~~~~~~~-------~~~~~i~~~gH~~~~e~--pe~~~~~I~~~~Fl~~~ 237 (435)
+ |+|+++|++|..+++. ...++.+.++. +++++++++||....+. +.++.+.+.+ |+.+.
T Consensus 647 ~~P~Li~~G~~D~~v~~~-~~~~~~~~l~~~~~~g~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~--fl~~~ 716 (741)
T 1yr2_A 647 YPAILVTTADTDDRVVPG-HSFKYTAALQTAAIGPKPHLIRIETRAGHGSGKPIDKQIEETADVQA--FLAHF 716 (741)
T ss_dssp CCEEEEEECSCCSSSCTH-HHHHHHHHHHHSCCCSSCEEEEEC---------CHHHHHHHHHHHHH--HHHHH
T ss_pred CCCEEEEeeCCCCCCChh-HHHHHHHHHhhhhcCCCCEEEEEeCCCCcCCCCCHHHHHHHHHHHHH--HHHHH
Confidence 5 9999999999999998 67777765544 68999999999977643 3477777888 77654
|
| >1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.07 E-value=2.1e-09 Score=109.17 Aligned_cols=191 Identities=19% Similarity=0.181 Sum_probs=103.2
Q ss_pred HHHHHHHHHHHHhhhc----------------CCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccccccc
Q 013862 17 GLLKLIERTIRSENCR----------------SSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQT 80 (435)
Q Consensus 17 ~~a~dl~~~l~~l~~~----------------~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~ 80 (435)
+.++|+.++++.+... ..+.++.++||||||.+++.+|.++|++++++|..++...........
T Consensus 305 ~e~~D~~a~IdwL~~~~~~~~d~~~~~~v~q~~~~grVgl~G~SyGG~ial~~Aa~~p~~lkaiV~~~~~~d~~~~~~~~ 384 (763)
T 1lns_A 305 QQIYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSYLGTMAYGAATTGVEGLELILAEAGISSWYNYYREN 384 (763)
T ss_dssp HHHHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETHHHHHHHHHHTTTCTTEEEEEEESCCSBHHHHHBSS
T ss_pred HHHHHHHHHHHHHhhcccccccccccccccccCCCCcEEEEEECHHHHHHHHHHHhCCcccEEEEEecccccHHHHhhhc
Confidence 5689999999998731 113489999999999999999999999999999998875321110000
Q ss_pred c-cccccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhh
Q 013862 81 I-MPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELL 159 (435)
Q Consensus 81 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (435)
. ... .......... .+............ .. ....+........... ............|.
T Consensus 385 g~~~~-~~g~~~~~~~---~l~~~~~~~~~~~g--~~---~~~~~~~~~~~~~~~~------~~~~~~~~~~~~w~---- 445 (763)
T 1lns_A 385 GLVRS-PGGFPGEDLD---VLAALTYSRNLDGA--DF---LKGNAEYEKRLAEMTA------ALDRKSGDYNQFWH---- 445 (763)
T ss_dssp SSBCC-CTTCTTCCHH---HHHHHHCGGGGSHH--HH---HHHHHHHHHHHHHHHH------HHCTTTCCCCHHHH----
T ss_pred chhhh-cccCCchhhh---HHhHHHHhhhcCcc--hh---hhHHHHHHHHHHHHHh------hhhhccCchhHHhh----
Confidence 0 000 0011100000 00000000000000 00 0000000000000000 00000000000010
Q ss_pred hhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCC--ceEEEeCCCCcccccc-CchhHHHHHhh
Q 013862 160 KSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPN--CQTRRFGGGGHFLFLE-DGVDLVTTIKG 230 (435)
Q Consensus 160 ~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e-~pe~~~~~I~~ 230 (435)
. ......+.+|++|+|+++|.+|..+++. ...++.+.+++ .+..++.++||..+.+ .++++.+.+.+
T Consensus 446 -~--~s~~~~l~~I~~PvLii~G~~D~~vp~~-~a~~l~~al~~~~~~~l~i~~~gH~~~~~~~~~~~~~~i~~ 515 (763)
T 1lns_A 446 -D--RNYLINTDKVKADVLIVHGLQDWNVTPE-QAYNFWKALPEGHAKHAFLHRGAHIYMNSWQSIDFSETINA 515 (763)
T ss_dssp -T--TBGGGGGGGCCSEEEEEEETTCCSSCTH-HHHHHHHHSCTTCCEEEEEESCSSCCCTTBSSCCHHHHHHH
T ss_pred -c--cChhhHhhcCCCCEEEEEECCCCCCChH-HHHHHHHhhccCCCeEEEEeCCcccCccccchHHHHHHHHH
Confidence 0 1123567889999999999999999998 68888888874 3444556789998765 56677777777
|
| >1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.05 E-value=3.6e-10 Score=105.21 Aligned_cols=65 Identities=18% Similarity=0.117 Sum_probs=45.4
Q ss_pred hcccccceEEEEeeCCCCCCCCh-hHHHHHHhhCCCceEEEeCCCCcccc-c-----cCc-hhHHHHHhhcccccc
Q 013862 169 RLDAVKAQTLILCSGRDQLLPSE-EEGDRLCRALPNCQTRRFGGGGHFLF-L-----EDG-VDLVTTIKGAGYYRR 236 (435)
Q Consensus 169 ~l~~i~~Pvlii~G~~D~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~-~-----e~p-e~~~~~I~~~~Fl~~ 236 (435)
.+..+. |+|+++|++|.+++.. ...+.+.+...+.++++++++||..+ . +++ +++.+.|.+ |+++
T Consensus 284 ~l~~l~-P~Lii~G~~D~~~~~~~~~~~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~i~~--fl~~ 356 (361)
T 1jkm_A 284 ELRGLP-PFVVAVNELDPLRDEGIAFARRLARAGVDVAARVNIGLVHGADVIFRHWLPAALESTVRDVAG--FAAD 356 (361)
T ss_dssp HHTTCC-CEEEEEETTCTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHH--HHHH
T ss_pred hHcCCC-ceEEEEcCcCcchhhHHHHHHHHHHcCCCEEEEEeCCCccCccccccccccHHHHHHHHHHHH--HHHH
Confidence 345555 9999999999988721 12233333344569999999999887 3 344 778888888 7754
|
| >3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A | Back alignment and structure |
|---|
Probab=99.02 E-value=2.1e-09 Score=96.17 Aligned_cols=55 Identities=22% Similarity=0.221 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcc
Q 013862 16 TGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATS 72 (435)
Q Consensus 16 ~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~ 72 (435)
+.+++++..+++..... .++++|+||||||.+|+.+|.++|++++++|+++|...
T Consensus 123 ~~~~~~~~~~~~~~~~~--~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~ 177 (280)
T 3i6y_A 123 DYVVNELPELIESMFPV--SDKRAIAGHSMGGHGALTIALRNPERYQSVSAFSPINN 177 (280)
T ss_dssp HHHHTHHHHHHHHHSSE--EEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEESCCCC
T ss_pred HHHHHHHHHHHHHhCCC--CCCeEEEEECHHHHHHHHHHHhCCccccEEEEeCCccc
Confidence 33456777777543221 25899999999999999999999999999999998753
|
| >1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.01 E-value=6e-10 Score=101.48 Aligned_cols=59 Identities=22% Similarity=0.154 Sum_probs=43.5
Q ss_pred ceEEEEeeCCCCCCCCh-hHHHHHHhhCCCceEEEeCCCCccccccC-----chhHHHHHhhccccc
Q 013862 175 AQTLILCSGRDQLLPSE-EEGDRLCRALPNCQTRRFGGGGHFLFLED-----GVDLVTTIKGAGYYR 235 (435)
Q Consensus 175 ~Pvlii~G~~D~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~-----pe~~~~~I~~~~Fl~ 235 (435)
.|+++++|++|.+++.. ...+.+.+...+++++++++++|...... .+++.+.+.+ ||+
T Consensus 245 ~P~li~~G~~D~l~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~--fl~ 309 (311)
T 1jji_A 245 PPALIITAEYDPLRDEGEVFGQMLRRAGVEASIVRYRGVLHGFINYYPVLKAARDAINQIAA--LLV 309 (311)
T ss_dssp CCEEEEEEEECTTHHHHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHH--HHH
T ss_pred ChheEEEcCcCcchHHHHHHHHHHHHcCCCEEEEEECCCCeeccccCCcCHHHHHHHHHHHH--HHh
Confidence 49999999999987522 12355556667889999999999877543 3667777777 664
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=1.1e-09 Score=111.09 Aligned_cols=159 Identities=13% Similarity=0.037 Sum_probs=89.3
Q ss_pred HHHHHHHHHHHhhhc--CCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccccchhHH
Q 013862 18 LLKLIERTIRSENCR--SSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTL 95 (435)
Q Consensus 18 ~a~dl~~~l~~l~~~--~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (435)
..+|+.+.++.+... ...+++.++|||+||++++.++.++|++++++|+..|......... . ......
T Consensus 513 ~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~~~~~p~~~~a~v~~~~~~d~~~~~~-----~---~~~~~~-- 582 (693)
T 3iuj_A 513 VFDDFIAAAEYLKAEGYTRTDRLAIRGGSNGGLLVGAVMTQRPDLMRVALPAVGVLDMLRYHT-----F---TAGTGW-- 582 (693)
T ss_dssp HHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCCTTTGGG-----S---GGGGGC--
T ss_pred cHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHhhCccceeEEEecCCcchhhhhcc-----C---CCchhH--
Confidence 345555555555332 1235899999999999999999999999999999888753211000 0 000000
Q ss_pred HHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhccc-cc
Q 013862 96 TLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARLDA-VK 174 (435)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~ 174 (435)
.. . .+.+ ..... .... +... .....+.. ++
T Consensus 583 -~~----~-~g~p-----------~~~~~----~~~~--------------------------~~~~--sp~~~~~~~~~ 613 (693)
T 3iuj_A 583 -AY----D-YGTS-----------ADSEA----MFDY--------------------------LKGY--SPLHNVRPGVS 613 (693)
T ss_dssp -HH----H-HCCT-----------TSCHH----HHHH--------------------------HHHH--CHHHHCCTTCC
T ss_pred -HH----H-cCCc-----------cCHHH----HHHH--------------------------HHhc--CHHHhhcccCC
Confidence 00 0 0000 00000 0000 0000 01134555 78
Q ss_pred ce-EEEEeeCCCCCCCChhHHHHHHhhCC-------CceEEEeCCCCccccc--cCchhHHHHHhhcccccccc
Q 013862 175 AQ-TLILCSGRDQLLPSEEEGDRLCRALP-------NCQTRRFGGGGHFLFL--EDGVDLVTTIKGAGYYRRGR 238 (435)
Q Consensus 175 ~P-vlii~G~~D~~~~~~~~~~~~~~~~~-------~~~~~~i~~~gH~~~~--e~pe~~~~~I~~~~Fl~~~~ 238 (435)
+| +|+++|++|..+++. ...++.+.+. ..++++++++||.... ++..+..+.+.+ ||.+..
T Consensus 614 ~Pp~Li~~G~~D~~v~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~--fl~~~l 684 (693)
T 3iuj_A 614 YPSTMVTTADHDDRVVPA-HSFKFAATLQADNAGPHPQLIRIETNAGHGAGTPVAKLIEQSADIYA--FTLYEM 684 (693)
T ss_dssp CCEEEEEEESSCSSSCTH-HHHHHHHHHHHHCCSSSCEEEEEEC-------CHHHHHHHHHHHHHH--HHHHHT
T ss_pred CCceeEEecCCCCCCChh-HHHHHHHHHHhhCCCCCCEEEEEeCCCCCCCcccHHHHHHHHHHHHH--HHHHHc
Confidence 87 999999999999998 5776666543 3478999999998765 456666677777 776543
|
| >3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=1.7e-09 Score=100.75 Aligned_cols=177 Identities=15% Similarity=0.110 Sum_probs=98.5
Q ss_pred CChHHHHHHHHHHHHHhhhc------CCCC-CEEEEEeChhHHHHHHHHHhCCC---ceeEEEEecCCcccccccccccc
Q 013862 13 HHFTGLLKLIERTIRSENCR------SSNR-PVYLVGESLGACLALAVAARNPD---MDLVLILANPATSFRKSLLQTIM 82 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~------~~~~-~~~lvGhS~Gg~va~~~a~~~p~---~v~~lVli~~~~~~~~~~~~~~~ 82 (435)
..+....+|+.+.++.+... ...+ +++|+|||+||.+|+.+|.+.++ +++++|+++|.........
T Consensus 159 ~~~~~~~~D~~~a~~~l~~~~~~~~~~d~~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~g~vl~~p~~~~~~~~~---- 234 (365)
T 3ebl_A 159 HRYPCAYDDGWTALKWVMSQPFMRSGGDAQARVFLSGDSSGGNIAHHVAVRAADEGVKVCGNILLNAMFGGTERTE---- 234 (365)
T ss_dssp SCTTHHHHHHHHHHHHHHHCTTTEETTTTEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCEEEEESCCCCCSSCCH----
T ss_pred CCCcHHHHHHHHHHHHHHhCchhhhCCCCCCcEEEEeeCccHHHHHHHHHHHHhcCCceeeEEEEccccCCCcCCh----
Confidence 45667778888888877532 1234 79999999999999999998766 8999999998853221100
Q ss_pred ccccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhh
Q 013862 83 PIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSA 162 (435)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (435)
. .... . .. .................... ....... ..+
T Consensus 235 --------~-----~~~~-~---~~-----------~~~~~~~~~~~~~~~~~~~~--------~~~~~~~---~p~--- 272 (365)
T 3ebl_A 235 --------S-----ERRL-D---GK-----------YFVTLQDRDWYWKAYLPEDA--------DRDHPAC---NPF--- 272 (365)
T ss_dssp --------H-----HHHH-T---TT-----------SSCCHHHHHHHHHHHSCTTC--------CTTSTTT---CTT---
T ss_pred --------h-----hhhc-C---CC-----------cccCHHHHHHHHHHhCCCCC--------CCCCccc---CCC---
Confidence 0 0000 0 00 00000001111110000000 0000000 000
Q ss_pred hhhhhhhccccc-ceEEEEeeCCCCCCCCh-hHHHHHHhhCCCceEEEeCCCCcccc----ccCchhHHHHHhhcccccc
Q 013862 163 SAYANARLDAVK-AQTLILCSGRDQLLPSE-EEGDRLCRALPNCQTRRFGGGGHFLF----LEDGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 163 ~~~~~~~l~~i~-~Pvlii~G~~D~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~----~e~pe~~~~~I~~~~Fl~~ 236 (435)
......+..+. .|+|+++|++|..++.. ...+.+.+.....++++++|++|..+ .++.+++.+.|.+ |+++
T Consensus 273 -~~~~~~l~~~~~pP~Li~~G~~D~l~~~~~~~~~~L~~~g~~v~l~~~~g~~H~f~~~~~~~~~~~~~~~i~~--Fl~~ 349 (365)
T 3ebl_A 273 -GPNGRRLGGLPFAKSLIIVSGLDLTCDRQLAYADALREDGHHVKVVQCENATVGFYLLPNTVHYHEVMEEISD--FLNA 349 (365)
T ss_dssp -STTCCCCTTSCCCCEEEEEETTSTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSSCSHHHHHHHHHHHH--HHHH
T ss_pred -CCcchhhccCCCCCEEEEEcCcccchhHHHHHHHHHHHCCCCEEEEEECCCcEEEeccCCCHHHHHHHHHHHH--HHHH
Confidence 00012233222 48999999999766432 13344545555779999999999876 4566788888888 8865
Q ss_pred cc
Q 013862 237 GR 238 (435)
Q Consensus 237 ~~ 238 (435)
..
T Consensus 350 ~~ 351 (365)
T 3ebl_A 350 NL 351 (365)
T ss_dssp HC
T ss_pred hh
Confidence 54
|
| >3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A | Back alignment and structure |
|---|
Probab=98.98 E-value=1.5e-09 Score=99.34 Aligned_cols=60 Identities=22% Similarity=0.163 Sum_probs=44.8
Q ss_pred CChHHHHHHHHHHHHHhhhc-CCCCCEEEEEeChhHHHHHHHHHhCCCc----eeEEEEecCCcc
Q 013862 13 HHFTGLLKLIERTIRSENCR-SSNRPVYLVGESLGACLALAVAARNPDM----DLVLILANPATS 72 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~-~~~~~~~lvGhS~Gg~va~~~a~~~p~~----v~~lVli~~~~~ 72 (435)
..+....+|+.+.++.+... ...++++|+|||+||.+|+.+|.+++++ ++++|+++|...
T Consensus 125 ~~~~~~~~D~~~a~~~l~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~ 189 (322)
T 3fak_A 125 HPFPAAVEDGVAAYRWLLDQGFKPQHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWAD 189 (322)
T ss_dssp SCTTHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCC
T ss_pred CCCCcHHHHHHHHHHHHHHcCCCCceEEEEEcCcCHHHHHHHHHHHHhcCCCCceEEEEECCEec
Confidence 34455566666666655432 2345899999999999999999887765 999999998864
|
| >4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=3e-09 Score=95.04 Aligned_cols=124 Identities=17% Similarity=0.167 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHHhhhc--CCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccccchhH
Q 013862 17 GLLKLIERTIRSENCR--SSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMT 94 (435)
Q Consensus 17 ~~a~dl~~~l~~l~~~--~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (435)
+.++++.++++++... .+.++++|+|+|+||.+|+.++.++|++++++|.+++....
T Consensus 136 ~~~~~l~~~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~sG~l~~--------------------- 194 (285)
T 4fhz_A 136 AAARDLDAFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRLLA--------------------- 194 (285)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEESCCCSC---------------------
T ss_pred HHHHHHHHHHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCcccCceEEEeecCccC---------------------
Confidence 3455666666654321 12468999999999999999999999999999988754210
Q ss_pred HHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhccccc
Q 013862 95 LTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARLDAVK 174 (435)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 174 (435)
. . .... ....+
T Consensus 195 -------------~--------------~----~~~~--------------------------------------~~~~~ 205 (285)
T 4fhz_A 195 -------------P--------------E----RLAE--------------------------------------EARSK 205 (285)
T ss_dssp -------------H--------------H----HHHH--------------------------------------HCCCC
T ss_pred -------------c--------------h----hhhh--------------------------------------hhhhc
Confidence 0 0 0000 01125
Q ss_pred ceEEEEeeCCCCCCCChhHHHHHHhhC----CCceEEEeCCCCccccccCchhHHHHHhhccccccc
Q 013862 175 AQTLILCSGRDQLLPSEEEGDRLCRAL----PNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRRG 237 (435)
Q Consensus 175 ~Pvlii~G~~D~~~~~~~~~~~~~~~~----~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~~ 237 (435)
.|+++++|++|.++|.+ ..+.+.+.+ .+.+++++++.||.+. ++++ +.+.+ ||++.
T Consensus 206 ~Pvl~~hG~~D~~Vp~~-~~~~~~~~L~~~g~~~~~~~y~g~gH~i~---~~~l-~~~~~--fL~~~ 265 (285)
T 4fhz_A 206 PPVLLVHGDADPVVPFA-DMSLAGEALAEAGFTTYGHVMKGTGHGIA---PDGL-SVALA--FLKER 265 (285)
T ss_dssp CCEEEEEETTCSSSCTH-HHHHHHHHHHHTTCCEEEEEETTCCSSCC---HHHH-HHHHH--HHHHH
T ss_pred CcccceeeCCCCCcCHH-HHHHHHHHHHHCCCCEEEEEECCCCCCCC---HHHH-HHHHH--HHHHH
Confidence 79999999999999998 566655443 3568999999999864 4444 34555 66544
|
| >3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=98.97 E-value=3.8e-09 Score=94.29 Aligned_cols=54 Identities=17% Similarity=0.171 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHh-hhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcc
Q 013862 17 GLLKLIERTIRSE-NCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATS 72 (435)
Q Consensus 17 ~~a~dl~~~l~~l-~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~ 72 (435)
..++++.+++++. +.. .++++|+||||||.+|+.+|.++|++++++|+++|...
T Consensus 122 ~~~~~~~~~~~~~~~~d--~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~ 176 (278)
T 3e4d_A 122 YVTEELPALIGQHFRAD--MSRQSIFGHSMGGHGAMTIALKNPERFKSCSAFAPIVA 176 (278)
T ss_dssp HHHTHHHHHHHHHSCEE--EEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEESCCSC
T ss_pred HHHHHHHHHHHhhcCCC--cCCeEEEEEChHHHHHHHHHHhCCcccceEEEeCCccc
Confidence 3456777777765 331 15899999999999999999999999999999998754
|
| >3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=98.96 E-value=3.4e-09 Score=97.11 Aligned_cols=60 Identities=18% Similarity=0.113 Sum_probs=45.2
Q ss_pred CChHHHHHHHHHHHHHhhhc-----CCCCCEEEEEeChhHHHHHHHHHhCCCc------eeEEEEecCCcc
Q 013862 13 HHFTGLLKLIERTIRSENCR-----SSNRPVYLVGESLGACLALAVAARNPDM------DLVLILANPATS 72 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~-----~~~~~~~lvGhS~Gg~va~~~a~~~p~~------v~~lVli~~~~~ 72 (435)
+.+....+|+.+.++.+... ...++++|+|||+||.+|+.+|.++|++ ++++|++.+...
T Consensus 132 ~~~~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~vl~~~~~~ 202 (326)
T 3ga7_A 132 ARYPQAIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKHIRCGNVIAILLWYGLYG 202 (326)
T ss_dssp SCTTHHHHHHHHHHHHHHHTTTTTTCCCSEEEEEEETHHHHHHHHHHHHHHHHTCCSSEEEEEEEESCCCS
T ss_pred CCCCcHHHHHHHHHHHHHHhHHHhCCChhheEEEEeCHHHHHHHHHHHHHHhcCCCccCceEEEEeccccc
Confidence 45556667777777666432 1235899999999999999999988764 999999887643
|
| >1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=5.4e-09 Score=95.02 Aligned_cols=58 Identities=16% Similarity=-0.012 Sum_probs=43.2
Q ss_pred ChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCC---CceeEEEEecCCc
Q 013862 14 HFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNP---DMDLVLILANPAT 71 (435)
Q Consensus 14 s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p---~~v~~lVli~~~~ 71 (435)
+.++.++++.+.++.+....+.++++||||||||.++..++..+| ++|+++|+++++.
T Consensus 75 ~~~~~~~~l~~~i~~~~~~~g~~~v~lVGhS~GG~va~~~~~~~~~~~~~v~~lV~l~~~~ 135 (317)
T 1tca_A 75 DTQVNTEYMVNAITALYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDY 135 (317)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCT
T ss_pred cHHHHHHHHHHHHHHHHHHhCCCCEEEEEEChhhHHHHHHHHHcCccchhhhEEEEECCCC
Confidence 444445555555555433333368999999999999999998876 8999999999874
|
| >3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=98.95 E-value=7.8e-10 Score=100.97 Aligned_cols=59 Identities=19% Similarity=0.107 Sum_probs=46.1
Q ss_pred ceEEEEeeCCCCCCC--ChhHHHHHHhhCCCceEEEeCCCCccc-----cccCchhHHHHHhhcccccc
Q 013862 175 AQTLILCSGRDQLLP--SEEEGDRLCRALPNCQTRRFGGGGHFL-----FLEDGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 175 ~Pvlii~G~~D~~~~--~~~~~~~~~~~~~~~~~~~i~~~gH~~-----~~e~pe~~~~~I~~~~Fl~~ 236 (435)
.|+++++|++|.+++ .. ..+.+.+...+++++++++++|.. ..+.++++.+.+.+ ||++
T Consensus 248 pP~li~~G~~D~~~~~~~~-~a~~l~~~g~~~~l~~~~g~~H~f~~~~~~~~~~~~~~~~~~~--~l~~ 313 (317)
T 3qh4_A 248 PATLITCGEIDPFRDEVLD-YAQRLLGAGVSTELHIFPRACHGFDSLLPEWTTSQRLFAMQGH--ALAD 313 (317)
T ss_dssp CCEEEEEEEESTTHHHHHH-HHHHHHHTTCCEEEEEEEEEETTHHHHCTTSHHHHHHHHHHHH--HHHH
T ss_pred CceeEEecCcCCCchhHHH-HHHHHHHcCCCEEEEEeCCCccchhhhcCCchHHHHHHHHHHH--HHHH
Confidence 499999999999887 33 456677777788999999999984 34566788888888 7653
|
| >3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=98.95 E-value=2.7e-09 Score=95.41 Aligned_cols=53 Identities=19% Similarity=0.217 Sum_probs=41.9
Q ss_pred HHHHHHHHHH-HhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcc
Q 013862 18 LLKLIERTIR-SENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATS 72 (435)
Q Consensus 18 ~a~dl~~~l~-~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~ 72 (435)
.++++..+++ .++.. .++++|+||||||.+|+.+|.++|++++++|+++|...
T Consensus 124 ~~~~~~~~~~~~~~~d--~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~ 177 (282)
T 3fcx_A 124 VTEELPQLINANFPVD--PQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICN 177 (282)
T ss_dssp HHTHHHHHHHHHSSEE--EEEEEEEEETHHHHHHHHHHHTSTTTSSCEEEESCCCC
T ss_pred HHHHHHHHHHHHcCCC--ccceEEEEECchHHHHHHHHHhCcccceEEEEeCCccC
Confidence 4456666665 33321 25799999999999999999999999999999998753
|
| >3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=98.93 E-value=4.6e-09 Score=93.88 Aligned_cols=55 Identities=18% Similarity=0.175 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcc
Q 013862 16 TGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATS 72 (435)
Q Consensus 16 ~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~ 72 (435)
+.+.+++...+++.-.. .++++|+||||||.+|+.+|.++|+++++++++++...
T Consensus 121 ~~~~~~~~~~i~~~~~~--~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~~ 175 (280)
T 3ls2_A 121 DYVVNELPALIEQHFPV--TSTKAISGHSMGGHGALMIALKNPQDYVSASAFSPIVN 175 (280)
T ss_dssp HHHHTHHHHHHHHHSSE--EEEEEEEEBTHHHHHHHHHHHHSTTTCSCEEEESCCSC
T ss_pred HHHHHHHHHHHHhhCCC--CCCeEEEEECHHHHHHHHHHHhCchhheEEEEecCccC
Confidence 34456777777654221 25899999999999999999999999999999998753
|
| >1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A | Back alignment and structure |
|---|
Probab=98.92 E-value=2.4e-09 Score=98.02 Aligned_cols=61 Identities=23% Similarity=0.079 Sum_probs=43.6
Q ss_pred ceEEEEeeCCCCCCCCh-hHHHHHHhhCCCceEEEeCCCCccccc----cCchhHHHHHhhccccccc
Q 013862 175 AQTLILCSGRDQLLPSE-EEGDRLCRALPNCQTRRFGGGGHFLFL----EDGVDLVTTIKGAGYYRRG 237 (435)
Q Consensus 175 ~Pvlii~G~~D~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~----e~pe~~~~~I~~~~Fl~~~ 237 (435)
+|+++++|++|.+++.. ...+.+.+...++++++++|+||.... +.++++.+.+.+ |+++.
T Consensus 250 ~P~li~~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~i~~--fl~~~ 315 (323)
T 1lzl_A 250 PPTYLSTMELDPLRDEGIEYALRLLQAGVSVELHSFPGTFHGSALVATAAVSERGAAEALT--AIRRG 315 (323)
T ss_dssp CCEEEEEETTCTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSTTSHHHHHHHHHHHH--HHHHH
T ss_pred ChhheEECCcCCchHHHHHHHHHHHHcCCCEEEEEeCcCccCcccCccCHHHHHHHHHHHH--HHHHH
Confidence 69999999999987411 123444444557899999999997543 336778888888 77643
|
| >4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi} | Back alignment and structure |
|---|
Probab=98.91 E-value=1.2e-08 Score=102.44 Aligned_cols=158 Identities=13% Similarity=0.055 Sum_probs=93.3
Q ss_pred HHHHHHHHHHHHHhhhcC--CCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccccchh
Q 013862 16 TGLLKLIERTIRSENCRS--SNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQM 93 (435)
Q Consensus 16 ~~~a~dl~~~l~~l~~~~--~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (435)
....+|+.+.++.+.... ..+++.++|||+||.+++.++.++|++++++|..+|........ . ....
T Consensus 536 ~~~~~D~~aav~~L~~~~~~d~~rI~i~G~S~GG~la~~~a~~~pd~f~a~V~~~pv~D~~~~~---------~-~~~~- 604 (711)
T 4hvt_A 536 QTAFNDFFAVSEELIKQNITSPEYLGIKGGSNGGLLVSVAMTQRPELFGAVACEVPILDMIRYK---------E-FGAG- 604 (711)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGG---------G-STTG-
T ss_pred cCcHHHHHHHHHHHHHcCCCCcccEEEEeECHHHHHHHHHHHhCcCceEEEEEeCCccchhhhh---------c-cccc-
Confidence 344556666666553321 23579999999999999999999999999999988875421100 0 0000
Q ss_pred HHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhcccc
Q 013862 94 TLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARLDAV 173 (435)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 173 (435)
...... .+.+ ..+ + ....+. . ......+.++
T Consensus 605 ~~~~~~-----~G~p-----------~~~-~----~~~~l~--------------------------~--~SP~~~v~~i 635 (711)
T 4hvt_A 605 HSWVTE-----YGDP-----------EIP-N----DLLHIK--------------------------K--YAPLENLSLT 635 (711)
T ss_dssp GGGHHH-----HCCT-----------TSH-H----HHHHHH--------------------------H--HCGGGSCCTT
T ss_pred hHHHHH-----hCCC-----------cCH-H----HHHHHH--------------------------H--cCHHHHHhhc
Confidence 000000 0000 000 0 000000 0 0112345566
Q ss_pred cc--eEEEEeeCCCCCCCChhHHHHHHhhC-----CCceEEEeCCCCcccccc--CchhHHHHHhhcccccc
Q 013862 174 KA--QTLILCSGRDQLLPSEEEGDRLCRAL-----PNCQTRRFGGGGHFLFLE--DGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 174 ~~--Pvlii~G~~D~~~~~~~~~~~~~~~~-----~~~~~~~i~~~gH~~~~e--~pe~~~~~I~~~~Fl~~ 236 (435)
++ |+|+++|++|..+++. ...++.+.+ ...++++++++||..... +.....+.+.+ |+.+
T Consensus 636 ~~~pPvLii~G~~D~~Vp~~-~s~~~~~aL~~~~g~pv~l~~~p~~gHg~~~~~~~~~~~~~~i~~--FL~~ 704 (711)
T 4hvt_A 636 QKYPTVLITDSVLDQRVHPW-HGRIFEYVLAQNPNTKTYFLESKDSGHGSGSDLKESANYFINLYT--FFAN 704 (711)
T ss_dssp SCCCEEEEEEETTCCSSCTH-HHHHHHHHHTTCTTCCEEEEEESSCCSSSCSSHHHHHHHHHHHHH--HHHH
T ss_pred CCCCCEEEEecCCCCcCChH-HHHHHHHHHHHHcCCCEEEEEECCCCCcCcCCcchHHHHHHHHHH--HHHH
Confidence 76 9999999999999998 677776665 346899999999987543 23334444555 6654
|
| >4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.91 E-value=7.1e-09 Score=90.61 Aligned_cols=57 Identities=14% Similarity=0.100 Sum_probs=45.0
Q ss_pred ChHHHHHHHHHHHHHhhhc-CCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCC
Q 013862 14 HFTGLLKLIERTIRSENCR-SSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPA 70 (435)
Q Consensus 14 s~~~~a~dl~~~l~~l~~~-~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~ 70 (435)
.+.+.++.+..+++..... .+.++++|+|+|+||++++.++.++|+.++++|.+++.
T Consensus 109 ~i~~~~~~i~~li~~~~~~gi~~~ri~l~GfSqGg~~a~~~~~~~~~~~a~~i~~sG~ 166 (246)
T 4f21_A 109 GINSSIAKVNKLIDSQVNQGIASENIILAGFSQGGIIATYTAITSQRKLGGIMALSTY 166 (246)
T ss_dssp -CHHHHHHHHHHHHHHHHC-CCGGGEEEEEETTTTHHHHHHHTTCSSCCCEEEEESCC
T ss_pred HHHHHHHHHHHHHHHHHHcCCChhcEEEEEeCchHHHHHHHHHhCccccccceehhhc
Confidence 4556667777777654321 23468999999999999999999999999999998875
|
| >2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=98.90 E-value=5e-09 Score=92.56 Aligned_cols=57 Identities=16% Similarity=0.130 Sum_probs=46.7
Q ss_pred hHHHHHHHHHHHHHhhh-c-CCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcc
Q 013862 15 FTGLLKLIERTIRSENC-R-SSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATS 72 (435)
Q Consensus 15 ~~~~a~dl~~~l~~l~~-~-~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~ 72 (435)
.+.+++|+.++++++.. . ...++++|+|||+||.+|+.+|. +|++++++|++++...
T Consensus 94 ~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~-~~~~~~~~v~~~~~~~ 152 (263)
T 2uz0_A 94 YTALAEELPQVLKRFFPNMTSKREKTFIAGLSMGGYGCFKLAL-TTNRFSHAASFSGALS 152 (263)
T ss_dssp HHHHHTHHHHHHHHHCTTBCCCGGGEEEEEETHHHHHHHHHHH-HHCCCSEEEEESCCCC
T ss_pred HHHHHHHHHHHHHHHhccccCCCCceEEEEEChHHHHHHHHHh-CccccceEEEecCCcc
Confidence 56778888888887532 1 11258999999999999999999 9999999999998864
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=98.89 E-value=8.2e-09 Score=105.50 Aligned_cols=56 Identities=21% Similarity=0.256 Sum_probs=41.2
Q ss_pred ChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCc
Q 013862 14 HFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPAT 71 (435)
Q Consensus 14 s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~ 71 (435)
+++|+++.+..+++. +. ...+++.++|+|+||++++.++.++|++++++|+.+|..
T Consensus 569 ~~~D~~~~~~~l~~~-~~-~d~~ri~i~G~S~GG~la~~~a~~~p~~~~a~v~~~~~~ 624 (751)
T 2xe4_A 569 TFSDFIAAAEFLVNA-KL-TTPSQLACEGRSAGGLLMGAVLNMRPDLFKVALAGVPFV 624 (751)
T ss_dssp HHHHHHHHHHHHHHT-TS-CCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCC
T ss_pred cHHHHHHHHHHHHHC-CC-CCcccEEEEEECHHHHHHHHHHHhCchheeEEEEeCCcc
Confidence 344444444444433 11 123589999999999999999999999999999998874
|
| >4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58} | Back alignment and structure |
|---|
Probab=98.87 E-value=1.2e-08 Score=91.41 Aligned_cols=56 Identities=25% Similarity=0.268 Sum_probs=45.0
Q ss_pred hHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcc
Q 013862 15 FTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATS 72 (435)
Q Consensus 15 ~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~ 72 (435)
.+.+++++..++++.... .++++|+||||||.+|+.+|.++|++++++++++|...
T Consensus 126 ~~~~~~~~~~~i~~~~~~--~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~~ 181 (283)
T 4b6g_A 126 YDYILNELPRLIEKHFPT--NGKRSIMGHSMGGHGALVLALRNQERYQSVSAFSPILS 181 (283)
T ss_dssp HHHHHTHHHHHHHHHSCE--EEEEEEEEETHHHHHHHHHHHHHGGGCSCEEEESCCCC
T ss_pred HHHHHHHHHHHHHHhCCC--CCCeEEEEEChhHHHHHHHHHhCCccceeEEEECCccc
Confidence 334466788888766221 25899999999999999999999999999999998753
|
| >3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A* | Back alignment and structure |
|---|
Probab=98.80 E-value=1.4e-08 Score=95.33 Aligned_cols=34 Identities=12% Similarity=0.157 Sum_probs=29.9
Q ss_pred CCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCC
Q 013862 36 RPVYLVGESLGACLALAVAARNPDMDLVLILANPA 70 (435)
Q Consensus 36 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~ 70 (435)
+++.++||||||.+++.++...+ +++++|++++.
T Consensus 219 ~~i~l~G~S~GG~~a~~~a~~~~-~v~a~v~~~~~ 252 (383)
T 3d59_A 219 EKIAVIGHSFGGATVIQTLSEDQ-RFRCGIALDAW 252 (383)
T ss_dssp EEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCC
T ss_pred cceeEEEEChhHHHHHHHHhhCC-CccEEEEeCCc
Confidence 47999999999999999988766 69999998865
|
| >2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.77 E-value=2e-07 Score=84.82 Aligned_cols=57 Identities=21% Similarity=0.256 Sum_probs=46.5
Q ss_pred CCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCC---Cc---eeEEEEecCCc
Q 013862 12 GHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNP---DM---DLVLILANPAT 71 (435)
Q Consensus 12 ~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p---~~---v~~lVli~~~~ 71 (435)
..+++++++++.+.++.+.. .++++++||||||.+|..+|.+.+ +. +++++++++..
T Consensus 84 ~~~~~~~a~~~~~~i~~~~~---~~~~~l~G~S~Gg~va~~~a~~l~~~g~~~p~v~~l~li~~~~ 146 (316)
T 2px6_A 84 LDSIHSLAAYYIDCIRQVQP---EGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGSP 146 (316)
T ss_dssp TTCHHHHHHHHHHHHTTTCS---SCCCEEEEETHHHHHHHHHHHHHHHHC---CCCCEEEEESCSS
T ss_pred cCCHHHHHHHHHHHHHHhCC---CCCEEEEEECHHHHHHHHHHHHHHHcCCcccccceEEEEcCCc
Confidence 46899999999988887643 258999999999999999998764 45 89999998764
|
| >4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A | Back alignment and structure |
|---|
Probab=98.76 E-value=8.6e-08 Score=84.60 Aligned_cols=125 Identities=16% Similarity=0.114 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccccchhHHH
Q 013862 17 GLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTLT 96 (435)
Q Consensus 17 ~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (435)
..+.|....++.+......+++.++|+||||.+++.++...|+ +++.|+..+... ...
T Consensus 129 ~~~~d~~a~l~~l~~~~d~~rv~~~G~S~GG~~a~~~a~~~pr-i~Aav~~~~~~~---------------~~~------ 186 (259)
T 4ao6_A 129 AVIADWAAALDFIEAEEGPRPTGWWGLSMGTMMGLPVTASDKR-IKVALLGLMGVE---------------GVN------ 186 (259)
T ss_dssp HHHHHHHHHHHHHHHHHCCCCEEEEECTHHHHHHHHHHHHCTT-EEEEEEESCCTT---------------STT------
T ss_pred HHHHHHHHHHHHhhhccCCceEEEEeechhHHHHHHHHhcCCc-eEEEEEeccccc---------------ccc------
Confidence 3445666666665443345789999999999999999999885 555554332210 000
Q ss_pred HHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhcccccce
Q 013862 97 LSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARLDAVKAQ 176 (435)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 176 (435)
. . ...+...++++|
T Consensus 187 --------------------------~-------~---------------------------------~~~~~a~~i~~P 200 (259)
T 4ao6_A 187 --------------------------G-------E---------------------------------DLVRLAPQVTCP 200 (259)
T ss_dssp --------------------------H-------H---------------------------------HHHHHGGGCCSC
T ss_pred --------------------------c-------c---------------------------------chhhhhccCCCC
Confidence 0 0 001224567899
Q ss_pred EEEEeeCCCCCCCChhHHHHHHhhCCC--ceEEEeCCCCccccccCchhHHHHHhhccccc
Q 013862 177 TLILCSGRDQLLPSEEEGDRLCRALPN--CQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYR 235 (435)
Q Consensus 177 vlii~G~~D~~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~ 235 (435)
+|+++|++|..+|++ .+..+.+.+.. .+++++++ +|... ..++..+.+.+ ||.
T Consensus 201 ~Li~hG~~D~~vp~~-~~~~l~~al~~~~k~l~~~~G-~H~~~--p~~e~~~~~~~--fl~ 255 (259)
T 4ao6_A 201 VRYLLQWDDELVSLQ-SGLELFGKLGTKQKTLHVNPG-KHSAV--PTWEMFAGTVD--YLD 255 (259)
T ss_dssp EEEEEETTCSSSCHH-HHHHHHHHCCCSSEEEEEESS-CTTCC--CHHHHTHHHHH--HHH
T ss_pred EEEEecCCCCCCCHH-HHHHHHHHhCCCCeEEEEeCC-CCCCc--CHHHHHHHHHH--HHH
Confidence 999999999999999 78888888754 46788885 77532 11334445555 554
|
| >3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822} | Back alignment and structure |
|---|
Probab=98.70 E-value=1.6e-07 Score=85.00 Aligned_cols=36 Identities=28% Similarity=0.393 Sum_probs=32.4
Q ss_pred CCCEEEEEeChhHHHHHHHHHhCCC-ceeEEEEecCC
Q 013862 35 NRPVYLVGESLGACLALAVAARNPD-MDLVLILANPA 70 (435)
Q Consensus 35 ~~~~~lvGhS~Gg~va~~~a~~~p~-~v~~lVli~~~ 70 (435)
.++++|+||||||.+++.++.++|+ +++++|+.+++
T Consensus 139 ~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~~vl~~~~ 175 (304)
T 3d0k_A 139 CEQVYLFGHSAGGQFVHRLMSSQPHAPFHAVTAANPG 175 (304)
T ss_dssp CSSEEEEEETHHHHHHHHHHHHSCSTTCSEEEEESCS
T ss_pred CCcEEEEEeChHHHHHHHHHHHCCCCceEEEEEecCc
Confidence 4689999999999999999999995 89999988765
|
| >3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.68 E-value=3e-08 Score=93.64 Aligned_cols=59 Identities=22% Similarity=0.216 Sum_probs=52.8
Q ss_pred CChHHHHHHHHHHHHHhhhcC---CCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCc
Q 013862 13 HHFTGLLKLIERTIRSENCRS---SNRPVYLVGESLGACLALAVAARNPDMDLVLILANPAT 71 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~~---~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~ 71 (435)
.+.+++++|+..++++++... ++.|++++||||||++|+.++.+||++|.++|+.+++.
T Consensus 100 lt~~q~~~Dl~~~~~~l~~~~~~~~~~p~il~GhS~GG~lA~~~~~~yP~~v~g~i~ssapv 161 (446)
T 3n2z_B 100 LTSEQALADFAELIKHLKRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAPI 161 (446)
T ss_dssp CSHHHHHHHHHHHHHHHHHHSTTGGGCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCCT
T ss_pred CCHHHHHHHHHHHHHHHHHhcccCCCCCEEEEEeCHHHHHHHHHHHhhhccccEEEEeccch
Confidence 478999999999999998753 45689999999999999999999999999999988664
|
| >1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A* | Back alignment and structure |
|---|
Probab=98.67 E-value=9e-08 Score=84.88 Aligned_cols=36 Identities=17% Similarity=0.115 Sum_probs=33.6
Q ss_pred CCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCc
Q 013862 36 RPVYLVGESLGACLALAVAARNPDMDLVLILANPAT 71 (435)
Q Consensus 36 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~ 71 (435)
+++.|+||||||.+|+.++.++|++++++|++++..
T Consensus 145 ~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~ 180 (268)
T 1jjf_A 145 EHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAP 180 (268)
T ss_dssp GGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCT
T ss_pred CceEEEEECHHHHHHHHHHHhCchhhhheEEeCCCC
Confidence 589999999999999999999999999999998863
|
| >4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=98.66 E-value=1.2e-07 Score=88.02 Aligned_cols=45 Identities=11% Similarity=0.031 Sum_probs=35.9
Q ss_pred cccceEEEEeeCCCCCCCChhHHHHHHhhCC--C-ceEEEeCC--CCcccc
Q 013862 172 AVKAQTLILCSGRDQLLPSEEEGDRLCRALP--N-CQTRRFGG--GGHFLF 217 (435)
Q Consensus 172 ~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~--~-~~~~~i~~--~gH~~~ 217 (435)
.+++|+++++|++|.++|.. ..+.+.+.+. + .+++.+++ .+|...
T Consensus 305 ~~~~Pvli~hG~~D~~Vp~~-~~~~l~~~l~~~G~v~~~~~~~~~~~H~~~ 354 (377)
T 4ezi_A 305 KPTAPLLLVGTKGDRDVPYA-GAEMAYHSFRKYSDFVWIKSVSDALDHVQA 354 (377)
T ss_dssp CCSSCEEEEECTTCSSSCHH-HHHHHHHHHHTTCSCEEEEESCSSCCTTTT
T ss_pred CCCCCEEEEecCCCCCCCHH-HHHHHHHHHHhcCCEEEEEcCCCCCCccCh
Confidence 57899999999999999998 5776665432 1 78999998 788754
|
| >3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A | Back alignment and structure |
|---|
Probab=98.64 E-value=1.5e-07 Score=88.63 Aligned_cols=58 Identities=12% Similarity=0.075 Sum_probs=38.8
Q ss_pred ChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHh-CC----C-ceeEEEEecCCcc
Q 013862 14 HFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAAR-NP----D-MDLVLILANPATS 72 (435)
Q Consensus 14 s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~-~p----~-~v~~lVli~~~~~ 72 (435)
++.++++++..++++++.. .+++++|+||||||.+++.+|.. .+ + .+.+++..+++..
T Consensus 147 ~~~d~~~~~~~~~~~~~~~-~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 210 (397)
T 3h2g_A 147 ATIDAMRAARSVLQHLKTP-LSGKVMLSGYSQGGHTAMATQREIEAHLSKEFHLVASAPISGPYA 210 (397)
T ss_dssp HHHHHHHHHHHHHHHHTCC-EEEEEEEEEETHHHHHHHHHHHHHHHHCTTTSEEEEEEEESCCSS
T ss_pred HHHHHHHHHHHHHHhcCCC-CCCcEEEEEECHHHHHHHHHHHHhhhhcCcCcceEEEeccccccc
Confidence 4556666667777776651 12489999999999999888732 22 2 4666666665543
|
| >1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=98.52 E-value=6e-07 Score=81.21 Aligned_cols=58 Identities=14% Similarity=0.099 Sum_probs=47.8
Q ss_pred CCChHHH-HHHHHHHHHH-hhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCc
Q 013862 12 GHHFTGL-LKLIERTIRS-ENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPAT 71 (435)
Q Consensus 12 ~~s~~~~-a~dl~~~l~~-l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~ 71 (435)
.++++++ ++++..++++ ++.. .++++|+||||||.+|+.+|.++|++++++|++++..
T Consensus 95 ~~~~~~~~~~~l~~~i~~~~~~~--~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~ 154 (304)
T 1sfr_A 95 TYKWETFLTSELPGWLQANRHVK--PTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLL 154 (304)
T ss_dssp CCBHHHHHHTHHHHHHHHHHCBC--SSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCS
T ss_pred cccHHHHHHHHHHHHHHHHCCCC--CCceEEEEECHHHHHHHHHHHhCccceeEEEEECCcc
Confidence 3566666 4788888887 4442 2489999999999999999999999999999998874
|
| >1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=98.50 E-value=8.9e-07 Score=79.02 Aligned_cols=54 Identities=20% Similarity=0.006 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHH-hhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCc
Q 013862 16 TGLLKLIERTIRS-ENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPAT 71 (435)
Q Consensus 16 ~~~a~dl~~~l~~-l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~ 71 (435)
+.+++|+..++++ ++.. .++++|+||||||.+|+.+|.++|++++++|++++..
T Consensus 93 ~~~~~~l~~~i~~~~~~~--~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~ 147 (280)
T 1r88_A 93 TFLSAELPDWLAANRGLA--PGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFL 147 (280)
T ss_dssp HHHHTHHHHHHHHHSCCC--SSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCC
T ss_pred HHHHHHHHHHHHHHCCCC--CCceEEEEECHHHHHHHHHHHhCccceeEEEEECCcc
Confidence 3456788888887 5542 2589999999999999999999999999999998874
|
| >2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A* | Back alignment and structure |
|---|
Probab=98.49 E-value=9.2e-07 Score=79.78 Aligned_cols=47 Identities=13% Similarity=0.069 Sum_probs=38.1
Q ss_pred cceEEEEeeCCCCCCCChhHHHHHHhhCC------CceEEEeCCCCccccccCc
Q 013862 174 KAQTLILCSGRDQLLPSEEEGDRLCRALP------NCQTRRFGGGGHFLFLEDG 221 (435)
Q Consensus 174 ~~Pvlii~G~~D~~~~~~~~~~~~~~~~~------~~~~~~i~~~gH~~~~e~p 221 (435)
..|+++++|++|.++|+. ..+++.+.+. +.+++.++++||....+.+
T Consensus 90 ~~Pvli~HG~~D~vVP~~-~s~~~~~~L~~~g~~~~ve~~~~~g~gH~~~~~~~ 142 (318)
T 2d81_A 90 QRKIYMWTGSSDTTVGPN-VMNQLKAQLGNFDNSANVSYVTTTGAVHTFPTDFN 142 (318)
T ss_dssp GCEEEEEEETTCCSSCHH-HHHHHHHHHTTTSCGGGEEEEEETTCCSSEEESSC
T ss_pred CCcEEEEeCCCCCCcCHH-HHHHHHHHHHhcCCCcceEEEEeCCCCCCCccCCc
Confidence 369999999999999998 6777776543 4588999999999876644
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E | Back alignment and structure |
|---|
Probab=98.45 E-value=3.1e-07 Score=83.37 Aligned_cols=56 Identities=23% Similarity=0.250 Sum_probs=51.0
Q ss_pred CCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCc
Q 013862 12 GHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPAT 71 (435)
Q Consensus 12 ~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~ 71 (435)
..+.+++++++.++++.++. ++++|+||||||.++..++.++|++|+++|+++++.
T Consensus 59 ~~~~~~l~~~i~~~l~~~~~----~~v~lvGHS~GG~va~~~a~~~p~~V~~lV~i~~p~ 114 (320)
T 1ys1_X 59 NGRGEQLLAYVKTVLAATGA----TKVNLVGHSQGGLTSRYVAAVAPDLVASVTTIGTPH 114 (320)
T ss_dssp TSHHHHHHHHHHHHHHHHCC----SCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred CCCHHHHHHHHHHHHHHhCC----CCEEEEEECHhHHHHHHHHHhChhhceEEEEECCCC
Confidence 45789999999999998876 589999999999999999999999999999999864
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 | Back alignment and structure |
|---|
Probab=98.39 E-value=3.1e-07 Score=71.71 Aligned_cols=51 Identities=16% Similarity=0.072 Sum_probs=42.9
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCC
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPD 59 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~ 59 (435)
+|.|..+... ++++++|+.+++++++. ++++++||||||.+++.+|.++|.
T Consensus 53 ~G~s~~~~~~---~~~~~~~~~~~~~~~~~----~~~~lvG~S~Gg~~a~~~a~~~p~ 103 (131)
T 2dst_A 53 YGRTEGPRMA---PEELAHFVAGFAVMMNL----GAPWVLLRGLGLALGPHLEALGLR 103 (131)
T ss_dssp STTCCCCCCC---HHHHHHHHHHHHHHTTC----CSCEEEECGGGGGGHHHHHHTTCC
T ss_pred CCCCCCCCCC---HHHHHHHHHHHHHHcCC----CccEEEEEChHHHHHHHHHhcCCc
Confidence 4555444332 99999999999999976 489999999999999999999995
|
| >2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A | Back alignment and structure |
|---|
Probab=98.37 E-value=3.3e-07 Score=83.61 Aligned_cols=56 Identities=14% Similarity=0.108 Sum_probs=46.9
Q ss_pred CChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhC--CCceeEEEEecCCcc
Q 013862 13 HHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARN--PDMDLVLILANPATS 72 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~--p~~v~~lVli~~~~~ 72 (435)
++.+++++++.+++++++. ++++||||||||.+++.++.++ |++|+++|+++++..
T Consensus 109 ~~~~~l~~~I~~l~~~~g~----~~v~LVGHSmGG~iA~~~a~~~~~p~~V~~lVlla~p~~ 166 (342)
T 2x5x_A 109 TKYAIIKTFIDKVKAYTGK----SQVDIVAHSMGVSMSLATLQYYNNWTSVRKFINLAGGIR 166 (342)
T ss_dssp HHHHHHHHHHHHHHHHHTC----SCEEEEEETHHHHHHHHHHHHHTCGGGEEEEEEESCCTT
T ss_pred HHHHHHHHHHHHHHHHhCC----CCEEEEEECHHHHHHHHHHHHcCchhhhcEEEEECCCcc
Confidence 4566667777777776655 5899999999999999999998 999999999998753
|
| >1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18 | Back alignment and structure |
|---|
Probab=98.36 E-value=5.3e-07 Score=80.66 Aligned_cols=55 Identities=24% Similarity=0.185 Sum_probs=49.4
Q ss_pred CChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCc
Q 013862 13 HHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPAT 71 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~ 71 (435)
.+.+++++++.++++.++. ++++|+||||||.++..++.++|++|+++|+++++.
T Consensus 55 ~~~~~~~~~i~~~~~~~~~----~~v~lvGhS~GG~~a~~~a~~~p~~v~~lv~i~~p~ 109 (285)
T 1ex9_A 55 VRGEQLLQQVEEIVALSGQ----PKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAPH 109 (285)
T ss_dssp HHHHHHHHHHHHHHHHHCC----SCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred hhHHHHHHHHHHHHHHhCC----CCEEEEEECHhHHHHHHHHHhChhheeEEEEECCCC
Confidence 3678889999999998865 589999999999999999999999999999999864
|
| >1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus} | Back alignment and structure |
|---|
Probab=98.33 E-value=4.5e-07 Score=86.29 Aligned_cols=60 Identities=18% Similarity=0.056 Sum_probs=50.6
Q ss_pred CChHHHHHHHHHHHHHhhhc--CCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcc
Q 013862 13 HHFTGLLKLIERTIRSENCR--SSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATS 72 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~--~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~ 72 (435)
++++++++|+.++++.+... .+.++++|+||||||.+|+.+|.++|++|+++|+++|+.+
T Consensus 121 ~~~~~~~~dl~~~i~~L~~~~g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~p 182 (452)
T 1w52_X 121 QNIRIVGAETAYLIQQLLTELSYNPENVHIIGHSLGAHTAGEAGRRLEGRVGRVTGLDPAEP 182 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCT
T ss_pred HhHHHHHHHHHHHHHHHHHhcCCCcccEEEEEeCHHHHHHHHHHHhcccceeeEEecccccc
Confidence 45678899999999998421 1135899999999999999999999999999999998753
|
| >1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A* | Back alignment and structure |
|---|
Probab=98.33 E-value=6e-07 Score=85.46 Aligned_cols=60 Identities=20% Similarity=0.080 Sum_probs=50.6
Q ss_pred CChHHHHHHHHHHHHHhhhc--CCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcc
Q 013862 13 HHFTGLLKLIERTIRSENCR--SSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATS 72 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~--~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~ 72 (435)
++++++++|+.++++++... .+.++++|+||||||.+|+.+|.++|++|+++|+++|+.+
T Consensus 121 ~~~~~~~~dl~~li~~L~~~~g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~p 182 (452)
T 1bu8_A 121 YNTRVVGAEIAFLVQVLSTEMGYSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAEP 182 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCT
T ss_pred hhHHHHHHHHHHHHHHHHHhcCCCccceEEEEEChhHHHHHHHHHhcccccceEEEecCCcc
Confidence 45678899999999998321 1125899999999999999999999999999999998753
|
| >1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19 | Back alignment and structure |
|---|
Probab=98.29 E-value=8.4e-07 Score=84.04 Aligned_cols=60 Identities=17% Similarity=0.092 Sum_probs=49.7
Q ss_pred CChHHHHHHHHHHHHHhhh--cCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcc
Q 013862 13 HHFTGLLKLIERTIRSENC--RSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATS 72 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~--~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~ 72 (435)
++.+.+++++.++++.+.. ..+.++++||||||||.+|..+|.++|++|+++|+++|+.+
T Consensus 120 ~~~~~v~~~la~ll~~L~~~~g~~~~~v~LIGhSlGg~vA~~~a~~~p~~v~~iv~Ldpa~p 181 (449)
T 1hpl_A 120 QNVRIVGAEVAYLVGVLQSSFDYSPSNVHIIGHSLGSHAAGEAGRRTNGAVGRITGLDPAEP 181 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCT
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcccEEEEEECHhHHHHHHHHHhcchhcceeeccCcccc
Confidence 4566788899999988831 11225899999999999999999999999999999998753
|
| >3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A* | Back alignment and structure |
|---|
Probab=98.28 E-value=4.9e-06 Score=78.63 Aligned_cols=47 Identities=13% Similarity=0.135 Sum_probs=38.8
Q ss_pred ccccceEEEEeeCCCCCCCChhHHHHHHhhC----CCceEEEeCCCCccccc
Q 013862 171 DAVKAQTLILCSGRDQLLPSEEEGDRLCRAL----PNCQTRRFGGGGHFLFL 218 (435)
Q Consensus 171 ~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~----~~~~~~~i~~~gH~~~~ 218 (435)
..+++|+++++|++|.++|.. ..+++.+.+ .+.+++++++++|....
T Consensus 341 ~~~~~PvlI~hG~~D~vVP~~-~s~~l~~~l~~~G~~V~~~~y~~~~H~~~~ 391 (462)
T 3guu_A 341 SVPKFPRFIWHAIPDEIVPYQ-PAATYVKEQCAKGANINFSPYPIAEHLTAE 391 (462)
T ss_dssp CCCCSEEEEEEETTCSSSCHH-HHHHHHHHHHHTTCEEEEEEESSCCHHHHH
T ss_pred CCCCCCEEEEeCCCCCcCCHH-HHHHHHHHHHHcCCCeEEEEECcCCccCch
Confidence 357899999999999999998 677766644 35689999999998865
|
| >3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A* | Back alignment and structure |
|---|
Probab=98.28 E-value=2.6e-06 Score=76.23 Aligned_cols=58 Identities=14% Similarity=-0.059 Sum_probs=41.7
Q ss_pred ChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhC---CCceeEEEEecCCc
Q 013862 14 HFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARN---PDMDLVLILANPAT 71 (435)
Q Consensus 14 s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~---p~~v~~lVli~~~~ 71 (435)
+.+..++++.++++.+....+.++++||||||||.++..++..+ +++|+++|+++++.
T Consensus 109 ~~~~~~~~la~~I~~l~~~~g~~~v~LVGHSmGGlvA~~al~~~p~~~~~V~~lV~lapp~ 169 (316)
T 3icv_A 109 DTQVNTEYMVNAITTLYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDY 169 (316)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCT
T ss_pred cHHHHHHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHhccccchhhceEEEECCCC
Confidence 44444555555555443322226899999999999998777775 58999999999884
|
| >2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=98.25 E-value=3.5e-06 Score=74.86 Aligned_cols=35 Identities=23% Similarity=0.311 Sum_probs=32.9
Q ss_pred CCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCC
Q 013862 36 RPVYLVGESLGACLALAVAARNPDMDLVLILANPA 70 (435)
Q Consensus 36 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~ 70 (435)
+++.++||||||.+|+.++.++|+.++++++++|.
T Consensus 152 ~~~~~~G~S~GG~~a~~~~~~~p~~f~~~~~~s~~ 186 (275)
T 2qm0_A 152 GKQTLFGHXLGGLFALHILFTNLNAFQNYFISSPS 186 (275)
T ss_dssp EEEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCC
T ss_pred CCCEEEEecchhHHHHHHHHhCchhhceeEEeCce
Confidence 47999999999999999999999999999999877
|
| >1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A | Back alignment and structure |
|---|
Probab=98.22 E-value=1.4e-06 Score=82.56 Aligned_cols=59 Identities=20% Similarity=0.220 Sum_probs=49.1
Q ss_pred CChHHHHHHHHHHHHHhhhc--CCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcc
Q 013862 13 HHFTGLLKLIERTIRSENCR--SSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATS 72 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~--~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~ 72 (435)
++++.+++++.++++.+... .+-++++||||||||.+|..+|.++|+ |.++++++|+.+
T Consensus 121 ~~~~~~a~~l~~ll~~L~~~~g~~~~~v~LVGhSlGg~vA~~~a~~~p~-v~~iv~Ldpa~p 181 (450)
T 1rp1_A 121 NNVRVVGAQVAQMLSMLSANYSYSPSQVQLIGHSLGAHVAGEAGSRTPG-LGRITGLDPVEA 181 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHTSTT-CCEEEEESCCCT
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCChhhEEEEEECHhHHHHHHHHHhcCC-cccccccCcccc
Confidence 45677889999999988411 112589999999999999999999999 999999998764
|
| >1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A* | Back alignment and structure |
|---|
Probab=98.20 E-value=1.3e-05 Score=72.01 Aligned_cols=56 Identities=11% Similarity=-0.023 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHhhhcC-----------CCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCc
Q 013862 16 TGLLKLIERTIRSENCRS-----------SNRPVYLVGESLGACLALAVAARNPDMDLVLILANPAT 71 (435)
Q Consensus 16 ~~~a~dl~~~l~~l~~~~-----------~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~ 71 (435)
+.+++++...++..-... ...++.|+||||||.+|+.++.++|+++++++.+++..
T Consensus 127 ~~~~~~l~~~i~~~~~~~~~~~~~~~i~~d~~~~~i~G~S~GG~~al~~a~~~p~~f~~~v~~sg~~ 193 (297)
T 1gkl_A 127 QEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDY 193 (297)
T ss_dssp HHHHHTHHHHHHHHSCSSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCCC
T ss_pred HHHHHHHHHHHHHhCCccccccccccccCCccceEEEEECHHHHHHHHHHHhCchhhheeeEecccc
Confidence 345677777777642211 12468999999999999999999999999999999874
|
| >1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A | Back alignment and structure |
|---|
Probab=98.20 E-value=1.5e-06 Score=82.44 Aligned_cols=60 Identities=17% Similarity=0.119 Sum_probs=50.1
Q ss_pred CChHHHHHHHHHHHHHhhhcC--CCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcc
Q 013862 13 HHFTGLLKLIERTIRSENCRS--SNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATS 72 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~~--~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~ 72 (435)
.+++++++|+.++++++.... +.++++|+||||||.+|+.+|.++|++++++++++|...
T Consensus 121 ~~~~~~~~dl~~~i~~l~~~~g~~~~~i~lvGhSlGg~vA~~~a~~~p~~v~~iv~l~pa~p 182 (432)
T 1gpl_A 121 QNIRVVGAEVAYLVQVLSTSLNYAPENVHIIGHSLGAHTAGEAGKRLNGLVGRITGLDPAEP 182 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHTTTTCSSEEEEESCBCT
T ss_pred hhHHHHHHHHHHHHHHHHHhcCCCcccEEEEEeCHHHHHHHHHHHhcccccceeEEeccccc
Confidence 456778899999999884211 236899999999999999999999999999999998743
|
| >1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A* | Back alignment and structure |
|---|
Probab=98.18 E-value=2.8e-06 Score=75.68 Aligned_cols=59 Identities=14% Similarity=0.034 Sum_probs=49.0
Q ss_pred CCChHHH-HHHHHHHHHH-hhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcc
Q 013862 12 GHHFTGL-LKLIERTIRS-ENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATS 72 (435)
Q Consensus 12 ~~s~~~~-a~dl~~~l~~-l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~ 72 (435)
.++++++ ++++..++++ ++.. .++++|+||||||.+|+.+|.++|++++++|++++...
T Consensus 90 ~~~~~~~~~~~l~~~i~~~~~~~--~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~ 150 (280)
T 1dqz_A 90 TYKWETFLTREMPAWLQANKGVS--PTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLN 150 (280)
T ss_dssp CCBHHHHHHTHHHHHHHHHHCCC--SSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCC
T ss_pred cccHHHHHHHHHHHHHHHHcCCC--CCceEEEEECHHHHHHHHHHHhCCchheEEEEecCccc
Confidence 4566665 5899999987 5542 24899999999999999999999999999999998753
|
| >2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A* | Back alignment and structure |
|---|
Probab=98.14 E-value=1.9e-06 Score=81.35 Aligned_cols=55 Identities=24% Similarity=0.353 Sum_probs=46.3
Q ss_pred CChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCC---CceeEEEEecCCc
Q 013862 13 HHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNP---DMDLVLILANPAT 71 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p---~~v~~lVli~~~~ 71 (435)
++.+++++++.+++++++. ++++|+||||||.+++.++.++| ++|+++|+++++.
T Consensus 109 ~~~~dla~~L~~ll~~lg~----~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~LVlIapp~ 166 (484)
T 2zyr_A 109 ETFSRLDRVIDEALAESGA----DKVDLVGHSMGTFFLVRYVNSSPERAAKVAHLILLDGVW 166 (484)
T ss_dssp HHHHHHHHHHHHHHHHHCC----SCEEEEEETHHHHHHHHHHHTCHHHHHTEEEEEEESCCC
T ss_pred hhHHHHHHHHHHHHHHhCC----CCEEEEEECHHHHHHHHHHHHCccchhhhCEEEEECCcc
Confidence 4566777777777777765 58999999999999999999998 4899999999874
|
| >1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=98.10 E-value=2.5e-05 Score=77.67 Aligned_cols=56 Identities=16% Similarity=0.013 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHhhhc--CCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcc
Q 013862 17 GLLKLIERTIRSENCR--SSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATS 72 (435)
Q Consensus 17 ~~a~dl~~~l~~l~~~--~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~ 72 (435)
..++|+.++++.+... ..+.++.++||||||.+++.+|..+|++++++|.+++...
T Consensus 123 ~~~~D~~~~i~~l~~~~~~~~~rv~l~G~S~GG~~al~~a~~~~~~l~a~v~~~~~~d 180 (615)
T 1mpx_A 123 DHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMID 180 (615)
T ss_dssp CHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTTEEEEEEESCCCC
T ss_pred cHHHHHHHHHHHHHhcCCCCCCeEEEEecCHHHHHHHHHhhcCCCceEEEEecCCccc
Confidence 4577888888877553 2234899999999999999999999999999999998865
|
| >3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A | Back alignment and structure |
|---|
Probab=98.06 E-value=7.2e-06 Score=80.98 Aligned_cols=58 Identities=10% Similarity=-0.138 Sum_probs=47.7
Q ss_pred hHHHHHHHHHHHHHhhhc-CCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCC-cc
Q 013862 15 FTGLLKLIERTIRSENCR-SSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPA-TS 72 (435)
Q Consensus 15 ~~~~a~dl~~~l~~l~~~-~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~-~~ 72 (435)
+.+.++|+.++++.+... ..+.++.++||||||.+++.+|.++|+.++++|.+++. ..
T Consensus 87 ~~~~~~D~~~~i~~l~~~~~~~~~v~l~G~S~GG~~a~~~a~~~~~~l~a~v~~~~~~~d 146 (587)
T 3i2k_A 87 HVDDEADAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADL 146 (587)
T ss_dssp TTTHHHHHHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSCT
T ss_pred ccchhHHHHHHHHHHHhCCCCCCeEEEEeeCHHHHHHHHHHhhCCCccEEEEEeCCcccc
Confidence 345688888888888532 12358999999999999999999999999999999887 54
|
| >2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus} | Back alignment and structure |
|---|
Probab=98.05 E-value=1e-07 Score=89.53 Aligned_cols=55 Identities=15% Similarity=0.140 Sum_probs=41.5
Q ss_pred ChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHh--------------------------CCCceeEEEEe
Q 013862 14 HFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAAR--------------------------NPDMDLVLILA 67 (435)
Q Consensus 14 s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~--------------------------~p~~v~~lVli 67 (435)
+++++++|+.+++++++. .++++||||||||.++..+|.. +|++|.++|++
T Consensus 132 ~~~~~a~dl~~ll~~l~~---~~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p~~V~slv~i 208 (431)
T 2hih_A 132 GHERYGKTYEGVLKDWKP---GHPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQDNMVTSITTI 208 (431)
T ss_dssp TCCSEEEEECCSCTTCBT---TBCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCCCCSCEEEEEEE
T ss_pred CHHHHHHHHHHHHHHhCC---CCCEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccccCcccceeEEEEE
Confidence 333444445555555542 2589999999999999999876 79999999999
Q ss_pred cCCc
Q 013862 68 NPAT 71 (435)
Q Consensus 68 ~~~~ 71 (435)
+++.
T Consensus 209 ~tP~ 212 (431)
T 2hih_A 209 ATPH 212 (431)
T ss_dssp SCCT
T ss_pred CCCC
Confidence 9864
|
| >3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=97.91 E-value=3.6e-05 Score=70.01 Aligned_cols=34 Identities=18% Similarity=0.251 Sum_probs=31.5
Q ss_pred EEEEEeChhHHHHHHHHHhCCCceeEEEEecCCc
Q 013862 38 VYLVGESLGACLALAVAARNPDMDLVLILANPAT 71 (435)
Q Consensus 38 ~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~ 71 (435)
..++||||||..|+.++.++|+.+++++.++|..
T Consensus 139 r~i~G~S~GG~~al~~~~~~p~~F~~~~~~S~~~ 172 (331)
T 3gff_A 139 NVLVGHSFGGLVAMEALRTDRPLFSAYLALDTSL 172 (331)
T ss_dssp EEEEEETHHHHHHHHHHHTTCSSCSEEEEESCCT
T ss_pred eEEEEECHHHHHHHHHHHhCchhhheeeEeCchh
Confidence 4799999999999999999999999999998873
|
| >3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A* | Back alignment and structure |
|---|
Probab=97.90 E-value=5e-05 Score=74.16 Aligned_cols=58 Identities=19% Similarity=-0.026 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHhhhc-CCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccc
Q 013862 16 TGLLKLIERTIRSENCR-SSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSF 73 (435)
Q Consensus 16 ~~~a~dl~~~l~~l~~~-~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~ 73 (435)
....+|+.++++.+... ..+.++.++||||||.+++.+|+.+|++++++|..++....
T Consensus 140 ~~~~~D~~~~i~~l~~~~~~~~~igl~G~S~GG~~al~~a~~~p~~l~aiv~~~~~~d~ 198 (560)
T 3iii_A 140 KREAEDYYEVIEWAANQSWSNGNIGTNGVSYLAVTQWWVASLNPPHLKAMIPWEGLNDM 198 (560)
T ss_dssp HHHHHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHTTCCTTEEEEEEESCCCBH
T ss_pred hhHHHHHHHHHHHHHhCCCCCCcEEEEccCHHHHHHHHHHhcCCCceEEEEecCCcccc
Confidence 36788888888887642 11358999999999999999999999999999999987653
|
| >2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A | Back alignment and structure |
|---|
Probab=97.84 E-value=9.5e-05 Score=73.86 Aligned_cols=56 Identities=14% Similarity=-0.043 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHhhhc--CCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcc
Q 013862 17 GLLKLIERTIRSENCR--SSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATS 72 (435)
Q Consensus 17 ~~a~dl~~~l~~l~~~--~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~ 72 (435)
..++|+.++++.+... ..+.++.++||||||.+++.+|.++|++++++|.+++...
T Consensus 136 ~~~~D~~~~i~~l~~~~~~~d~rvgl~G~SyGG~~al~~a~~~~~~lka~v~~~~~~d 193 (652)
T 2b9v_A 136 DETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPALKVAAPESPMVD 193 (652)
T ss_dssp CHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEEEECCC
T ss_pred chhhHHHHHHHHHHhcCCCCCCCEEEEecCHHHHHHHHHHhcCCCceEEEEecccccc
Confidence 5677888888877553 1234899999999999999999999999999999988765
|
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.75 E-value=4.6e-05 Score=82.61 Aligned_cols=56 Identities=20% Similarity=0.184 Sum_probs=43.6
Q ss_pred CChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhC---CCceeEEEEecCCc
Q 013862 13 HHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARN---PDMDLVLILANPAT 71 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~---p~~v~~lVli~~~~ 71 (435)
.+.+++++...+.++.+.. +.++.++|||+||.+|..+|.+. .+.+..++++++..
T Consensus 1092 ~~~~~~~~~~~~~i~~~~~---~gp~~l~G~S~Gg~lA~e~A~~L~~~g~~v~~l~lld~~~ 1150 (1304)
T 2vsq_A 1092 IEEEDRLDRYADLIQKLQP---EGPLTLFGYSAGCSLAFEAAKKLEEQGRIVQRIIMVDSYK 1150 (1304)
T ss_dssp CCSTTHHHHHHHHHHHHCC---SSCEEEEEETTHHHHHHHHHHHHHHSSCCEEEEEEESCCE
T ss_pred cCHHHHHHHHHHHHHHhCC---CCCeEEEEecCCchHHHHHHHHHHhCCCceeEEEEecCcc
Confidence 3566777777777766543 36899999999999999998764 45689999998764
|
| >1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A* | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00013 Score=64.20 Aligned_cols=57 Identities=18% Similarity=0.219 Sum_probs=43.6
Q ss_pred ChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCC---ceeEEEEecCC
Q 013862 14 HFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPD---MDLVLILANPA 70 (435)
Q Consensus 14 s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~---~v~~lVli~~~ 70 (435)
.++.+.+++.++++.+...+++.++++.||||||.+|..++.+... .+..+++-+|.
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~GHSLGGalA~l~a~~l~~~~~~~~~~tfg~P~ 175 (269)
T 1tib_A 116 SWRSVADTLRQKVEDAVREHPDYRVVFTGHSLGGALATVAGADLRGNGYDIDVFSYGAPR 175 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHHTTSSSCEEEEEESCCC
T ss_pred HHHHHHHHHHHHHHHHHHHCCCceEEEecCChHHHHHHHHHHHHHhcCCCeEEEEeCCCC
Confidence 3567788888888888777777899999999999999999988653 25544444443
|
| >3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=97.50 E-value=0.0016 Score=59.01 Aligned_cols=58 Identities=12% Similarity=0.024 Sum_probs=45.1
Q ss_pred CChHHHHHHHHHHHHHhhhcC----CCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCc
Q 013862 13 HHFTGLLKLIERTIRSENCRS----SNRPVYLVGESLGACLALAVAARNPDMDLVLILANPAT 71 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~~----~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~ 71 (435)
-++..++-++...++.|.... ..+++.++|||+||..|+.+|+..+ ||+.+|..++..
T Consensus 158 gal~awaWg~~raid~L~~~~~~~VD~~RIgv~G~S~gG~~al~~aA~D~-Ri~~~v~~~~g~ 219 (375)
T 3pic_A 158 GAMTAWAWGVSRVIDALELVPGARIDTTKIGVTGCSRNGKGAMVAGAFEK-RIVLTLPQESGA 219 (375)
T ss_dssp CHHHHHHHHHHHHHHHHHHCGGGCEEEEEEEEEEETHHHHHHHHHHHHCT-TEEEEEEESCCT
T ss_pred HHHHHHHHHHHHHHHHHHhCCccCcChhhEEEEEeCCccHHHHHHHhcCC-ceEEEEeccCCC
Confidence 345566667888888875431 1358999999999999999999875 899999888653
|
| >2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00029 Score=65.15 Aligned_cols=36 Identities=14% Similarity=0.183 Sum_probs=31.8
Q ss_pred CCEEEEEeChhHHHHHHHHHh-------------------CC------CceeEEEEecCCc
Q 013862 36 RPVYLVGESLGACLALAVAAR-------------------NP------DMDLVLILANPAT 71 (435)
Q Consensus 36 ~~~~lvGhS~Gg~va~~~a~~-------------------~p------~~v~~lVli~~~~ 71 (435)
++++||||||||.++..++.+ +| ++|+++|+++++.
T Consensus 104 ~kv~LVGHSmGG~va~~~a~~l~~~~~~e~~~~~~~~~~~~P~~~g~~~~V~sLV~i~tP~ 164 (387)
T 2dsn_A 104 GRIHIIAHSQGGQTARMLVSLLENGSQEEREYAKAHNVSLSPLFEGGHHFVLSVTTIATPH 164 (387)
T ss_dssp CCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCCEEEEEEESCCT
T ss_pred CceEEEEECHHHHHHHHHHHHhccccccccccccccccccCccccccccceeEEEEECCCC
Confidence 689999999999999999972 36 7999999999864
|
| >4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A* | Back alignment and structure |
|---|
Probab=97.35 E-value=0.0015 Score=59.87 Aligned_cols=58 Identities=14% Similarity=-0.005 Sum_probs=44.4
Q ss_pred CChHHHHHHHHHHHHHhhh------cCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCc
Q 013862 13 HHFTGLLKLIERTIRSENC------RSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPAT 71 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~------~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~ 71 (435)
-++..|+-++...++.|.. .-..+++.++|||+||..|+.+++..+ ||+.+|..++..
T Consensus 190 gal~aWAWg~~raiDyL~~~~~~~~~VD~~RIgv~G~S~gG~~Al~aaA~D~-Ri~~vi~~~sg~ 253 (433)
T 4g4g_A 190 GSLTAWAWGVDRLIDGLEQVGAQASGIDTKRLGVTGCSRNGKGAFITGALVD-RIALTIPQESGA 253 (433)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCHHHHCEEEEEEEEEEETHHHHHHHHHHHHCT-TCSEEEEESCCT
T ss_pred HHHHHHHHhHHHHHHHHHhccccCCCcChhHEEEEEeCCCcHHHHHHHhcCC-ceEEEEEecCCC
Confidence 3455566677777777754 112468999999999999999999875 899999888653
|
| >3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A* | Back alignment and structure |
|---|
Probab=97.18 E-value=0.0005 Score=64.43 Aligned_cols=53 Identities=11% Similarity=0.077 Sum_probs=40.6
Q ss_pred HHHHHHHHHHh-hhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCc
Q 013862 19 LKLIERTIRSE-NCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPAT 71 (435)
Q Consensus 19 a~dl~~~l~~l-~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~ 71 (435)
++++...+++. ......++++|+||||||.+|+.++.++|+++++++++++..
T Consensus 258 ~~el~~~i~~~~~~~~d~~~~~l~G~S~GG~~al~~a~~~p~~f~~~~~~sg~~ 311 (403)
T 3c8d_A 258 QQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSY 311 (403)
T ss_dssp HHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCT
T ss_pred HHHHHHHHHHHCCCCCCCCceEEEEECHHHHHHHHHHHhCchhhcEEEEecccc
Confidence 35555555543 211123579999999999999999999999999999998874
|
| >1tgl_A Triacyl-glycerol acylhydrolase; carboxylic esterase; 1.90A {Rhizomucor miehei} SCOP: c.69.1.17 PDB: 4tgl_A 5tgl_A* 3tgl_A | Back alignment and structure |
|---|
Probab=97.14 E-value=0.00079 Score=59.21 Aligned_cols=44 Identities=20% Similarity=0.194 Sum_probs=34.2
Q ss_pred ChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhC
Q 013862 14 HFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARN 57 (435)
Q Consensus 14 s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~ 57 (435)
++..+.+++.+.++.+...+++.++++.||||||.+|..+|.+.
T Consensus 114 ~~~~l~~~~~~~l~~~~~~~p~~~i~~~GHSLGgalA~l~a~~l 157 (269)
T 1tgl_A 114 SYGEVQNELVATVLDQFKQYPSYKVAVTGHSLGGATALLCALDL 157 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCceEEEEeeCHHHHHHHHHHHHH
Confidence 35666777777777665555566799999999999999988766
|
| >1lgy_A Lipase, triacylglycerol lipase; hydrolase (carboxylic ester); 2.20A {Rhizopus niveus} SCOP: c.69.1.17 PDB: 1tic_A | Back alignment and structure |
|---|
Probab=97.11 E-value=0.00099 Score=58.52 Aligned_cols=43 Identities=16% Similarity=0.196 Sum_probs=35.3
Q ss_pred hHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhC
Q 013862 15 FTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARN 57 (435)
Q Consensus 15 ~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~ 57 (435)
+..+.+++.+.++.+...+++.++++.||||||.+|..++...
T Consensus 116 ~~~~~~~~~~~l~~~~~~~~~~~i~vtGHSLGGalA~l~a~~~ 158 (269)
T 1lgy_A 116 YEQVVNDYFPVVQEQLTAHPTYKVIVTGHSLGGAQALLAGMDL 158 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEEeccChHHHHHHHHHHHH
Confidence 5566777788888776667778999999999999999888765
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0092 Score=56.38 Aligned_cols=60 Identities=15% Similarity=0.188 Sum_probs=48.9
Q ss_pred cceEEEEeeCCCCCCCChhHHHHHHhhCC-----------------------------CceEEEeCCCCccccccCchhH
Q 013862 174 KAQTLILCSGRDQLLPSEEEGDRLCRALP-----------------------------NCQTRRFGGGGHFLFLEDGVDL 224 (435)
Q Consensus 174 ~~Pvlii~G~~D~~~~~~~~~~~~~~~~~-----------------------------~~~~~~i~~~gH~~~~e~pe~~ 224 (435)
.++|||..|+.|.+++.. ..+.+.+.+. +.++..+.++||+++.++|++.
T Consensus 361 girVlIYsGD~D~icn~~-Gt~~wi~~L~~~~~~~~~pw~~~~~~~~~~vaG~~~~y~nLtf~tV~gAGHmVP~dqP~~a 439 (452)
T 1ivy_A 361 KYQILLYNGDVDMACNFM-GDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPLAA 439 (452)
T ss_dssp CCEEEEEEETTCSSSCHH-HHHHHHHHTCCCEEEEEEEEEEECTTSCEEEEEEEEEESSEEEEEETTCCSSHHHHCHHHH
T ss_pred CceEEEEeCCCCccCCcH-HHHHHHHhcCCcccccceeeeeccCCCCcccceEEEEEcceEEEEECCCcccCcccChHHH
Confidence 689999999999999987 5665554432 2356788999999999999999
Q ss_pred HHHHhhcccccc
Q 013862 225 VTTIKGAGYYRR 236 (435)
Q Consensus 225 ~~~I~~~~Fl~~ 236 (435)
.+.+.. |+..
T Consensus 440 l~m~~~--fl~g 449 (452)
T 1ivy_A 440 FTMFSR--FLNK 449 (452)
T ss_dssp HHHHHH--HHTT
T ss_pred HHHHHH--HhcC
Confidence 999999 7653
|
| >1whs_B Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1wht_B* 1bcs_B* 1bcr_B* 3sc2_B* | Back alignment and structure |
|---|
Probab=97.07 E-value=0.00065 Score=53.90 Aligned_cols=62 Identities=13% Similarity=0.144 Sum_probs=53.2
Q ss_pred ccceEEEEeeCCCCCCCChhHHHHHHhhCC------------------------CceEEEeCCCCccccccCchhHHHHH
Q 013862 173 VKAQTLILCSGRDQLLPSEEEGDRLCRALP------------------------NCQTRRFGGGGHFLFLEDGVDLVTTI 228 (435)
Q Consensus 173 i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~------------------------~~~~~~i~~~gH~~~~e~pe~~~~~I 228 (435)
-.+++|+..|+.|.+++.. ..+.+.+.+. +.++..+.+|||+++.++|+...+.+
T Consensus 63 ~girvlIy~Gd~D~i~~~~-Gt~~~i~~L~w~~~~~~~~w~~~~~vaG~~~~~~~Ltf~~V~~AGHmVP~dqP~~a~~m~ 141 (153)
T 1whs_B 63 AGLRIWVFSGDTDAVVPLT-ATRYSIGALGLPTTTSWYPWYDDQEVGGWSQVYKGLTLVSVRGAGHEVPLHRPRQALVLF 141 (153)
T ss_dssp TTCEEEEEEETTCSSSCHH-HHHHHHHTTTCCEEEEEEEEEETTEEEEEEEEETTEEEEEETTCCSSHHHHSHHHHHHHH
T ss_pred cCceEEEEecCcCcccccH-hHHHHHHhCCCCCcccccceeECCCccEEEEEeCeEEEEEECCCcccCcccCHHHHHHHH
Confidence 3689999999999999988 5777777664 67889999999999999999999999
Q ss_pred hhccccccc
Q 013862 229 KGAGYYRRG 237 (435)
Q Consensus 229 ~~~~Fl~~~ 237 (435)
.. |+...
T Consensus 142 ~~--fl~~~ 148 (153)
T 1whs_B 142 QY--FLQGK 148 (153)
T ss_dssp HH--HHHTC
T ss_pred HH--HHCCC
Confidence 99 77643
|
| >1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0009 Score=59.11 Aligned_cols=44 Identities=23% Similarity=0.266 Sum_probs=35.7
Q ss_pred hHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCC
Q 013862 15 FTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNP 58 (435)
Q Consensus 15 ~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p 58 (435)
++.+.+++.+.++.+...+++.++++.||||||.+|..+|....
T Consensus 116 ~~~~~~~~~~~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l~ 159 (279)
T 1tia_A 116 WKLVRDDIIKELKEVVAQNPNYELVVVGHSLGAAVATLAATDLR 159 (279)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHHHHH
Confidence 45566777777877766677789999999999999999988754
|
| >1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A* | Back alignment and structure |
|---|
Probab=96.90 E-value=0.05 Score=50.72 Aligned_cols=60 Identities=13% Similarity=0.216 Sum_probs=48.1
Q ss_pred cceEEEEeeCCCCCCCChhHHHHHHhhCC-------------------------------CceEEEeCCCCccccccCch
Q 013862 174 KAQTLILCSGRDQLLPSEEEGDRLCRALP-------------------------------NCQTRRFGGGGHFLFLEDGV 222 (435)
Q Consensus 174 ~~Pvlii~G~~D~~~~~~~~~~~~~~~~~-------------------------------~~~~~~i~~~gH~~~~e~pe 222 (435)
..+|||..|+.|.+++.. ..+.+.+.+. +.+++.+.++||+++.++|+
T Consensus 327 girVlIysGd~D~i~~~~-Gt~~wi~~L~w~~~~~F~~a~~~~w~~~~~~~vaG~~~~~~~Ltf~~V~~AGHmVP~dqP~ 405 (421)
T 1cpy_A 327 DLPILVYAGDKDFICNWL-GNKAWTDVLPWKYDEEFASQKVRNWTASITDEVAGEVKSYKHFTYLRVFNGGHMVPFDVPE 405 (421)
T ss_dssp TCCEEEEEETTCSTTCHH-HHHHHHHHCCSTTHHHHHHSCCEEEECTTTCSEEEEECEETTEEEEEETTCCSSHHHHCHH
T ss_pred CCeEEEEECCcccccChH-HHHHHHHhccCccchhhhhccccceEEcCCCceeeEEEEeccEEEEEECCCcccCcccCHH
Confidence 589999999999999987 4554443321 24677899999999999999
Q ss_pred hHHHHHhhcccccc
Q 013862 223 DLVTTIKGAGYYRR 236 (435)
Q Consensus 223 ~~~~~I~~~~Fl~~ 236 (435)
...+.+.+ |+..
T Consensus 406 ~al~m~~~--fl~g 417 (421)
T 1cpy_A 406 NALSMVNE--WIHG 417 (421)
T ss_dssp HHHHHHHH--HHTT
T ss_pred HHHHHHHH--HhcC
Confidence 99999999 7754
|
| >3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482} | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0014 Score=61.13 Aligned_cols=52 Identities=12% Similarity=0.095 Sum_probs=40.0
Q ss_pred HHHHHHHHHhhhcC--CCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcc
Q 013862 20 KLIERTIRSENCRS--SNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATS 72 (435)
Q Consensus 20 ~dl~~~l~~l~~~~--~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~ 72 (435)
.|+...++.+.... ..+++.++||||||.+++.+|... ++++++|++++...
T Consensus 207 ~D~~~a~d~l~~~~~vd~~rI~v~G~S~GG~~al~~a~~~-~~i~a~v~~~~~~~ 260 (391)
T 3g8y_A 207 YLDMQVLNWMKAQSYIRKDRIVISGFSLGTEPMMVLGVLD-KDIYAFVYNDFLCQ 260 (391)
T ss_dssp HHHHHHHHHHHTCTTEEEEEEEEEEEGGGHHHHHHHHHHC-TTCCEEEEESCBCC
T ss_pred HHHHHHHHHHHhccCCCCCeEEEEEEChhHHHHHHHHHcC-CceeEEEEccCCCC
Confidence 67788888875421 124789999999999999888764 57999998887654
|
| >1uwc_A Feruloyl esterase A; hydrolase, serine esterase, xylan degradation; HET: NAG FER; 1.08A {Aspergillus niger} SCOP: c.69.1.17 PDB: 1uza_A* 2hl6_A* 2ix9_A* 1usw_A* 2bjh_A* | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0019 Score=56.34 Aligned_cols=43 Identities=21% Similarity=0.358 Sum_probs=33.9
Q ss_pred hHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhC
Q 013862 15 FTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARN 57 (435)
Q Consensus 15 ~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~ 57 (435)
+..+.+++.+.++.+...+++.++++.|||+||.+|..+|...
T Consensus 104 ~~~~~~~~~~~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l 146 (261)
T 1uwc_A 104 WISVQDQVESLVKQQASQYPDYALTVTGHSLGASMAALTAAQL 146 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCceEEEEecCHHHHHHHHHHHHH
Confidence 3445667777777776667778999999999999999888763
|
| >2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A* | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0023 Score=56.63 Aligned_cols=34 Identities=21% Similarity=0.128 Sum_probs=31.4
Q ss_pred CCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCC
Q 013862 36 RPVYLVGESLGACLALAVAARNPDMDLVLILANPA 70 (435)
Q Consensus 36 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~ 70 (435)
+++.|+||||||.+|+.++.+ |+.++++++++|.
T Consensus 141 ~r~~i~G~S~GG~~a~~~~~~-p~~f~~~~~~s~~ 174 (278)
T 2gzs_A 141 QRRGLWGHSYGGLFVLDSWLS-SSYFRSYYSASPS 174 (278)
T ss_dssp EEEEEEEETHHHHHHHHHHHH-CSSCSEEEEESGG
T ss_pred CceEEEEECHHHHHHHHHHhC-ccccCeEEEeCcc
Confidence 358999999999999999999 9999999998876
|
| >3g7n_A Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A {Penicillium expansum} | Back alignment and structure |
|---|
Probab=96.45 E-value=0.0089 Score=51.87 Aligned_cols=41 Identities=17% Similarity=0.231 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHh
Q 013862 16 TGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAAR 56 (435)
Q Consensus 16 ~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~ 56 (435)
....+++.+.++.+...+++.++++.|||+||.+|..+|..
T Consensus 104 ~~~~~~~~~~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~ 144 (258)
T 3g7n_A 104 SAVHDTIITEVKALIAKYPDYTLEAVGHSLGGALTSIAHVA 144 (258)
T ss_dssp HHHHHHHHHHHHHHHHHSTTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEeccCHHHHHHHHHHHH
Confidence 44555666666666666677899999999999999887764
|
| >3ngm_A Extracellular lipase; secret lipase, hydrolase; 2.80A {Gibberella zeae} | Back alignment and structure |
|---|
Probab=96.38 E-value=0.0047 Score=55.25 Aligned_cols=42 Identities=19% Similarity=0.230 Sum_probs=32.6
Q ss_pred hHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHh
Q 013862 15 FTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAAR 56 (435)
Q Consensus 15 ~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~ 56 (435)
+..+.+++.+.++.+...+++.++++.|||+||.+|..+|..
T Consensus 115 ~~~i~~~l~~~l~~~~~~~p~~~i~vtGHSLGGAlA~L~a~~ 156 (319)
T 3ngm_A 115 WNEISAAATAAVAKARKANPSFKVVSVGHSLGGAVATLAGAN 156 (319)
T ss_dssp HHHHHHHHHHHHHHHHHSSTTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCceEEeecCHHHHHHHHHHHH
Confidence 345556667777776666677899999999999999987765
|
| >4az3_B Lysosomal protective protein 20 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_B* | Back alignment and structure |
|---|
Probab=96.33 E-value=0.005 Score=48.92 Aligned_cols=63 Identities=14% Similarity=0.172 Sum_probs=50.8
Q ss_pred cccceEEEEeeCCCCCCCChhHHHHHHhhCC-----------------------------CceEEEeCCCCccccccCch
Q 013862 172 AVKAQTLILCSGRDQLLPSEEEGDRLCRALP-----------------------------NCQTRRFGGGGHFLFLEDGV 222 (435)
Q Consensus 172 ~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~-----------------------------~~~~~~i~~~gH~~~~e~pe 222 (435)
.-.+++|+..|+.|.+++.. ..+.+.+.+. +.+++.+.+|||+++.++|+
T Consensus 61 ~~girVliy~Gd~D~icn~~-G~~~~i~~L~w~~~~~~~~w~~~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dqP~ 139 (155)
T 4az3_B 61 SQKYQILLYNGDVDMACNFM-GDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPL 139 (155)
T ss_dssp TCCCEEEEEEETTCSSSCHH-HHHHHHHHTCCSSCCCCEEEEEEETTTEEEEEEEEEEETTEEEEEETTCCSCHHHHCHH
T ss_pred HcCceEEEEecccCcccCcH-hHHHHHHhcccccccccccceeecccCCCEEEEEEEEeCCEEEEEECCCcCcChhhCHH
Confidence 34689999999999999987 5666555432 33577888999999999999
Q ss_pred hHHHHHhhccccccc
Q 013862 223 DLVTTIKGAGYYRRG 237 (435)
Q Consensus 223 ~~~~~I~~~~Fl~~~ 237 (435)
...+.+.+ |+..+
T Consensus 140 ~al~m~~~--fl~g~ 152 (155)
T 4az3_B 140 AAFTMFSR--FLNKQ 152 (155)
T ss_dssp HHHHHHHH--HHTTC
T ss_pred HHHHHHHH--HHcCC
Confidence 99999999 77643
|
| >3uue_A LIP1, secretory lipase (family 3); LID-domain, hydrolase; HET: NAG BMA MAN; 1.45A {Malassezia globosa} PDB: 3uuf_A* | Back alignment and structure |
|---|
Probab=96.24 E-value=0.011 Score=52.02 Aligned_cols=55 Identities=20% Similarity=0.198 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHh----CCCceeEEEEecCC
Q 013862 16 TGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAAR----NPDMDLVLILANPA 70 (435)
Q Consensus 16 ~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~----~p~~v~~lVli~~~ 70 (435)
....+++.+.++.+...+++.++++.|||+||.+|..+|.. .|.....++..+++
T Consensus 118 ~~~~~~~~~~l~~~~~~~p~~~l~vtGHSLGGalA~l~a~~l~~~~~~~~~~~~tfg~P 176 (279)
T 3uue_A 118 NDLMDDIFTAVKKYKKEKNEKRVTVIGHSLGAAMGLLCAMDIELRMDGGLYKTYLFGLP 176 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHHHHHHHSTTCCSEEEEESCC
T ss_pred HHHHHHHHHHHHHHHHhCCCceEEEcccCHHHHHHHHHHHHHHHhCCCCceEEEEecCC
Confidence 44455566666655554566799999999999999987754 34434444444443
|
| >3qpa_A Cutinase; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted; HET: MIR; 0.85A {Nectria haematococca} PDB: 3qpc_A* 1cex_A 1oxm_A* 1cui_A 1cus_A 2cut_A 1cuj_A 1cuy_A 1xzl_A* 1xzk_A* 1xzm_A* 1cuh_A 1cuu_A 3esc_A* 1cua_A* 3esa_A* 3esb_A* 3ef3_A* 3esd_A* 1cux_A ... | Back alignment and structure |
|---|
Probab=96.08 E-value=0.029 Score=46.02 Aligned_cols=58 Identities=16% Similarity=0.094 Sum_probs=48.5
Q ss_pred ChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCC----CceeEEEEecCCc
Q 013862 14 HFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNP----DMDLVLILANPAT 71 (435)
Q Consensus 14 s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p----~~v~~lVli~~~~ 71 (435)
|..+=++++...++......|+.+++|+|+|.|+.++-..+..-| ++|.++|+++-+.
T Consensus 75 S~~~G~~~~~~~i~~~~~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGdP~ 136 (197)
T 3qpa_A 75 TSSAAIREMLGLFQQANTKCPDATLIAGGYXQGAALAAASIEDLDSAIRDKIAGTVLFGYTK 136 (197)
T ss_dssp SCHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHSCHHHHTTEEEEEEESCTT
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCcEEEEecccccHHHHHHHhcCCHhHHhheEEEEEeeCCc
Confidence 566778888888888877788889999999999999998877665 6899999987553
|
| >3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=96.06 E-value=0.0079 Score=56.18 Aligned_cols=53 Identities=9% Similarity=0.056 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHhhhcC--CCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCc
Q 013862 18 LLKLIERTIRSENCRS--SNRPVYLVGESLGACLALAVAARNPDMDLVLILANPAT 71 (435)
Q Consensus 18 ~a~dl~~~l~~l~~~~--~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~ 71 (435)
.+.|+...++.+.... ..+++.++||||||.+++.+|+.. ++++++|.+++..
T Consensus 210 ~~~D~~~ald~l~~~~~vd~~rI~v~G~S~GG~~a~~~aa~~-~~i~a~v~~~~~~ 264 (398)
T 3nuz_A 210 ASYLDMQVLNWMKTQKHIRKDRIVVSGFSLGTEPMMVLGTLD-TSIYAFVYNDFLC 264 (398)
T ss_dssp HHHHHHHHHHHHTTCSSEEEEEEEEEEEGGGHHHHHHHHHHC-TTCCEEEEESCBC
T ss_pred HHHHHHHHHHHHHhCCCCCCCeEEEEEECHhHHHHHHHHhcC-CcEEEEEEecccc
Confidence 3467777888775421 124799999999999999888765 5788888876543
|
| >4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A* | Back alignment and structure |
|---|
Probab=96.05 E-value=0.025 Score=53.92 Aligned_cols=59 Identities=15% Similarity=0.172 Sum_probs=52.2
Q ss_pred CChHHHHHHHHHHHHHhhhcCC--CCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCc
Q 013862 13 HHFTGLLKLIERTIRSENCRSS--NRPVYLVGESLGACLALAVAARNPDMDLVLILANPAT 71 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~~~--~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~ 71 (435)
.|.++..+|+..++++++.... +.|++++|-|+||++|..+-.+||+.|.+.+..+++.
T Consensus 103 Lt~eQALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LaAW~R~kYP~lv~ga~ASSApv 163 (472)
T 4ebb_A 103 LTVEQALADFAELLRALRRDLGAQDAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAPV 163 (472)
T ss_dssp CSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCCT
T ss_pred CCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEccCccchhhHHHHhhCCCeEEEEEecccce
Confidence 5899999999999999876532 4689999999999999999999999999999888775
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=95.96 E-value=0.0012 Score=75.42 Aligned_cols=58 Identities=12% Similarity=0.169 Sum_probs=0.0
Q ss_pred cccceEEEEeeCCCCCCCChh-HHHHHHhhCC-CceEEEeCCCCccccccCc--hhHHHHHhh
Q 013862 172 AVKAQTLILCSGRDQLLPSEE-EGDRLCRALP-NCQTRRFGGGGHFLFLEDG--VDLVTTIKG 230 (435)
Q Consensus 172 ~i~~Pvlii~G~~D~~~~~~~-~~~~~~~~~~-~~~~~~i~~~gH~~~~e~p--e~~~~~I~~ 230 (435)
.+.+|++++.|++|....... ....|.+... ..+++.++ ++|+.+++.| +++++.|.+
T Consensus 2439 ~l~~pI~lf~a~~d~~~~~~~~~~~~W~~~t~g~~~v~~v~-G~H~~ml~~~~v~~la~~L~~ 2500 (2512)
T 2vz8_A 2439 TYHGNVTLLRAKTGGAYGEDLGADYNLSQVCDGKVSVHVIE-GDHRTLLEGSGLESILSIIHS 2500 (2512)
T ss_dssp ---------------------------------------------------------------
T ss_pred CccCCEEEEEecCCCcccccccccccHHHhcCCCcEEEEEC-CCchHhhCCccHHHHHHHHHH
Confidence 578999999999887654320 1223444443 45888898 5999999888 467777766
|
| >3o0d_A YALI0A20350P, triacylglycerol lipase; alpha/beta-hydrolase, lipids binding, glycosylation, extracellular, hydrolase; HET: NAG; 1.70A {Yarrowia lipolytica} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=95.93 E-value=0.01 Score=52.81 Aligned_cols=42 Identities=19% Similarity=0.184 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhC
Q 013862 16 TGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARN 57 (435)
Q Consensus 16 ~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~ 57 (435)
....+++.+.++.+...+++.++++.|||+||.+|..+|...
T Consensus 134 ~~~~~~i~~~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l 175 (301)
T 3o0d_A 134 NNTYNQIGPKLDSVIEQYPDYQIAVTGHSLGGAAALLFGINL 175 (301)
T ss_dssp HHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCceEEEeccChHHHHHHHHHHHH
Confidence 334445555555555556677999999999999999888653
|
| >3dcn_A Cutinase, cutin hydrolase; catalytic triad, secreted, serine esterase; 1.90A {Glomerella cingulata} SCOP: c.69.1.0 PDB: 3dd5_A 3dea_A* | Back alignment and structure |
|---|
Probab=95.37 E-value=0.04 Score=45.30 Aligned_cols=57 Identities=12% Similarity=0.070 Sum_probs=47.3
Q ss_pred ChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCC----CceeEEEEecCC
Q 013862 14 HFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNP----DMDLVLILANPA 70 (435)
Q Consensus 14 s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p----~~v~~lVli~~~ 70 (435)
|..+=+.++...++......|+.+++|+|+|.|+.++-..+..-| ++|.++|+++-+
T Consensus 83 S~~~G~~~~~~~i~~~~~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGdP 143 (201)
T 3dcn_A 83 TSSAAINEARRLFTLANTKCPNAAIVSGGYSQGTAVMAGSISGLSTTIKNQIKGVVLFGYT 143 (201)
T ss_dssp SCHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHTTSCHHHHHHEEEEEEETCT
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCcEEEEeecchhHHHHHHHhcCChhhhhheEEEEEeeCc
Confidence 566778888888888877788889999999999999988776655 579999988755
|
| >3qpd_A Cutinase 1; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted, phosphorylated Ser residue; HET: SEP; 1.57A {Aspergillus oryzae} PDB: 3gbs_A | Back alignment and structure |
|---|
Probab=94.91 E-value=0.072 Score=43.29 Aligned_cols=57 Identities=11% Similarity=0.043 Sum_probs=45.0
Q ss_pred hHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCC----CceeEEEEecCCc
Q 013862 15 FTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNP----DMDLVLILANPAT 71 (435)
Q Consensus 15 ~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p----~~v~~lVli~~~~ 71 (435)
.+.-++++..+++......|+.+++|+|+|.|+.++-..+..-| ++|.++++++-+.
T Consensus 72 ~~~g~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGdP~ 132 (187)
T 3qpd_A 72 SQAAIAEAQGLFEQAVSKCPDTQIVAGGYSQGTAVMNGAIKRLSADVQDKIKGVVLFGYTR 132 (187)
T ss_dssp CHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHTTSCHHHHHHEEEEEEESCTT
T ss_pred hhHHHHHHHHHHHHHHHhCCCCcEEEEeeccccHHHHhhhhcCCHhhhhhEEEEEEeeCCc
Confidence 44556777778777766677889999999999999988776555 5799999987553
|
| >3hc7_A Gene 12 protein, GP12; alpha/beta sandwich, cell adhesion; 2.00A {Mycobacterium phage D29} | Back alignment and structure |
|---|
Probab=94.90 E-value=0.053 Score=46.50 Aligned_cols=58 Identities=12% Similarity=-0.044 Sum_probs=45.9
Q ss_pred ChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhC-----------CCceeEEEEecCCc
Q 013862 14 HFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARN-----------PDMDLVLILANPAT 71 (435)
Q Consensus 14 s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~-----------p~~v~~lVli~~~~ 71 (435)
|..+=++++...++......|+.+++|.|+|.|+.++-.++... .++|.++|+.+-+.
T Consensus 52 S~~~G~~~~~~~i~~~~~~CP~tkiVL~GYSQGA~V~~~~l~~~i~~~~g~~~~~~~~V~avvlfGdP~ 120 (254)
T 3hc7_A 52 SVEKGVAELILQIELKLDADPYADFAMAGYSQGAIVVGQVLKHHILPPTGRLHRFLHRLKKVIFWGNPM 120 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCCEEEEEETHHHHHHHHHHHHHTSSTTCTTGGGGGGEEEEEEESCTT
T ss_pred hHHHHHHHHHHHHHHHHhhCCCCeEEEEeeCchHHHHHHHHHhhccCCCCCchhhhhhEEEEEEEeCCC
Confidence 45667778888888777778888999999999999998877652 35788888887553
|
| >4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A* | Back alignment and structure |
|---|
Probab=94.79 E-value=0.056 Score=48.03 Aligned_cols=55 Identities=16% Similarity=0.054 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHhhhcC------CCCCEEEEEeChhHHHHHHHHHhC--CCceeEEEEecCCc
Q 013862 17 GLLKLIERTIRSENCRS------SNRPVYLVGESLGACLALAVAARN--PDMDLVLILANPAT 71 (435)
Q Consensus 17 ~~a~dl~~~l~~l~~~~------~~~~~~lvGhS~Gg~va~~~a~~~--p~~v~~lVli~~~~ 71 (435)
.+++++..+++..-... ..++..|.||||||.-|+.+|.++ |++..++...++..
T Consensus 128 ~l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G~SMGG~gAl~~al~~~~~~~~~~~~s~s~~~ 190 (299)
T 4fol_A 128 YIHKELPQTLDSHFNKNGDVKLDFLDNVAITGISMGGYGAICGYLKGYSGKRYKSCSAFAPIV 190 (299)
T ss_dssp HHHTHHHHHHHHHHCC-----BCSSSSEEEEEBTHHHHHHHHHHHHTGGGTCCSEEEEESCCC
T ss_pred HHHHHhHHHHHHhcccccccccccccceEEEecCchHHHHHHHHHhCCCCCceEEEEeccccc
Confidence 35677888777532111 113578999999999999999996 56777777666654
|
| >1gxs_B P-(S)-hydroxymandelonitrIle lyase chain B; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=94.59 E-value=0.047 Score=43.33 Aligned_cols=60 Identities=15% Similarity=0.244 Sum_probs=49.1
Q ss_pred cceEEEEeeCCCCCCCChhHHHHHHhhCC---------------------------CceEEEeCCCCccccccCchhHHH
Q 013862 174 KAQTLILCSGRDQLLPSEEEGDRLCRALP---------------------------NCQTRRFGGGGHFLFLEDGVDLVT 226 (435)
Q Consensus 174 ~~Pvlii~G~~D~~~~~~~~~~~~~~~~~---------------------------~~~~~~i~~~gH~~~~e~pe~~~~ 226 (435)
..++|+..|+.|.+++.. ..+.+.+.+. +.++..+.+|||+++.++|+...+
T Consensus 66 girVliysGd~D~i~~~~-Gt~~wi~~L~w~~~~~~~~w~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dqP~~al~ 144 (158)
T 1gxs_B 66 GLRVWVYSGDTDSVVPVS-STRRSLAALELPVKTSWYPWYMAPTEREVGGWSVQYEGLTYVTVRGAGHLVPVHRPAQAFL 144 (158)
T ss_dssp TCEEEEEEETTCSSSCHH-HHHHHHHTTCCCEEEEEEEEESSTTCCSEEEEEEEETTEEEEEETTCCSSHHHHCHHHHHH
T ss_pred CCeEEEEecccCccCCcH-HHHHHHHHCCCcccCCccceEECCCCCcccceEEEeCCEEEEEECCCcccCcccCcHHHHH
Confidence 689999999999999987 4555555431 235778899999999999999999
Q ss_pred HHhhcccccc
Q 013862 227 TIKGAGYYRR 236 (435)
Q Consensus 227 ~I~~~~Fl~~ 236 (435)
.+.. |+..
T Consensus 145 m~~~--fl~g 152 (158)
T 1gxs_B 145 LFKQ--FLKG 152 (158)
T ss_dssp HHHH--HHHT
T ss_pred HHHH--HHcC
Confidence 9999 7764
|
| >1g66_A Acetyl xylan esterase II; serine hydrolase, acetyl xylopyranose, hydrolase; 0.90A {Penicillium purpurogenum} SCOP: c.69.1.30 PDB: 1bs9_A 2axe_A* | Back alignment and structure |
|---|
Probab=94.57 E-value=0.066 Score=44.57 Aligned_cols=58 Identities=16% Similarity=0.143 Sum_probs=44.9
Q ss_pred ChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHh--------------CC----CceeEEEEecCCc
Q 013862 14 HFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAAR--------------NP----DMDLVLILANPAT 71 (435)
Q Consensus 14 s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~--------------~p----~~v~~lVli~~~~ 71 (435)
|..+=++++...++......|+.+++|+|+|.|+.++...+.. .| ++|.++++++-+.
T Consensus 60 S~~~G~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~~~~~~~~i~~~~~~l~~~~~~~V~avvlfGdP~ 135 (207)
T 1g66_A 60 SVAQGIAAVASAVNSFNSQCPSTKIVLVGYSQGGEIMDVALCGGGDPNQGYTNTAVQLSSSAVNMVKAAIFMGDPM 135 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTTCEEEEEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESCTT
T ss_pred hHHHHHHHHHHHHHHHHHhCCCCcEEEEeeCchHHHHHHHHhcccccccccccCCCCCChhhhccEEEEEEEcCCC
Confidence 3455677888888887777888899999999999999887752 22 5688888887653
|
| >1qoz_A AXE, acetyl xylan esterase; hydrolase, xylan degradation; HET: NAG; 1.90A {Trichoderma reesei} SCOP: c.69.1.30 | Back alignment and structure |
|---|
Probab=94.04 E-value=0.1 Score=43.46 Aligned_cols=58 Identities=14% Similarity=0.036 Sum_probs=44.5
Q ss_pred ChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHh--------------CC----CceeEEEEecCCc
Q 013862 14 HFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAAR--------------NP----DMDLVLILANPAT 71 (435)
Q Consensus 14 s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~--------------~p----~~v~~lVli~~~~ 71 (435)
|..+=++++...++......|+.+++|+|+|.|+.++...+.. .| ++|.++++++-+.
T Consensus 60 S~~~G~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~~~~~~~~i~~~~~~l~~~~~~~V~avvlfGdP~ 135 (207)
T 1qoz_A 60 SVVNGTNAAAAAINNFHNSCPDTQLVLVGYSQGAQIFDNALCGGGDPGEGITNTAVPLTAGAVSAVKAAIFMGDPR 135 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESCTT
T ss_pred cHHHHHHHHHHHHHHHHhhCCCCcEEEEEeCchHHHHHHHHhccCcccccccCCCCCCChHHhccEEEEEEEcCCc
Confidence 3455577778888877777888899999999999999887751 22 4688888887653
|
| >2czq_A Cutinase-like protein; alpha/beta hydrolase fold, hydrolase; HET: CIT; 1.05A {Cryptococcus SP} | Back alignment and structure |
|---|
Probab=93.66 E-value=0.099 Score=43.32 Aligned_cols=56 Identities=20% Similarity=0.073 Sum_probs=46.1
Q ss_pred ChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhC--C----CceeEEEEecCC
Q 013862 14 HFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARN--P----DMDLVLILANPA 70 (435)
Q Consensus 14 s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~--p----~~v~~lVli~~~ 70 (435)
| .+=++++...|+......|+.+++|+|+|.|+.++-..+... | ++|.++|+++-+
T Consensus 56 S-~~G~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~lg~~~~~~~~V~avvlfGdP 117 (205)
T 2czq_A 56 S-AAGTADIIRRINSGLAANPNVCYILQGYSQGAAATVVALQQLGTSGAAFNAVKGVFLIGNP 117 (205)
T ss_dssp C-HHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHHCSSSHHHHHEEEEEEESCT
T ss_pred C-HHHHHHHHHHHHHHHhhCCCCcEEEEeeCchhHHHHHHHHhccCChhhhhhEEEEEEEeCC
Confidence 5 677888888888887778888999999999999998877654 4 479999998744
|
| >1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A* | Back alignment and structure |
|---|
Probab=93.64 E-value=0.15 Score=43.81 Aligned_cols=60 Identities=12% Similarity=-0.074 Sum_probs=45.6
Q ss_pred CChHHHHHHHHHHHHHhhhcC---CCCCEEEEEeChhHHHHHHHHHhC------CCceeEEEEecCCcc
Q 013862 13 HHFTGLLKLIERTIRSENCRS---SNRPVYLVGESLGACLALAVAARN------PDMDLVLILANPATS 72 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~~---~~~~~~lvGhS~Gg~va~~~a~~~------p~~v~~lVli~~~~~ 72 (435)
.+.++.++|+.++++..-..+ ...+++|.|+|+||..+..+|..- .-.++++++.++...
T Consensus 119 ~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~inLkGi~ign~~~d 187 (255)
T 1whs_A 119 SGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPVINLKGFMVGNGLID 187 (255)
T ss_dssp CCHHHHHHHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHHHHHHTCSSCEEEEEEEEEECCB
T ss_pred CCHHHHHHHHHHHHHHHHHhCHHhcCCCEEEEecCCccccHHHHHHHHHHcCCcccccceEEecCCccC
Confidence 467888889888887654433 246899999999999988877532 246899999988854
|
| >2ory_A Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Photobacterium SP} | Back alignment and structure |
|---|
Probab=93.26 E-value=0.072 Score=48.24 Aligned_cols=35 Identities=17% Similarity=0.227 Sum_probs=24.6
Q ss_pred HHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHh
Q 013862 22 IERTIRSENCRSSNRPVYLVGESLGACLALAVAAR 56 (435)
Q Consensus 22 l~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~ 56 (435)
+.+.++.....+++.++++.|||+||.+|..+|..
T Consensus 152 l~~~l~~~~~~~~~~~i~vtGHSLGGAlA~l~a~~ 186 (346)
T 2ory_A 152 ILQFLNEKIGPEGKAKICVTGHSKGGALSSTLALW 186 (346)
T ss_dssp HHHHHHHHHCTTCCEEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHhhhhccCCceEEEecCChHHHHHHHHHHH
Confidence 34444444332334689999999999999988764
|
| >1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=93.05 E-value=0.1 Score=49.78 Aligned_cols=62 Identities=8% Similarity=0.026 Sum_probs=49.7
Q ss_pred cceEEEEeeCCCCCCCChhHHHHHHhhCC-------------------------------------CceEEEeCCCCccc
Q 013862 174 KAQTLILCSGRDQLLPSEEEGDRLCRALP-------------------------------------NCQTRRFGGGGHFL 216 (435)
Q Consensus 174 ~~Pvlii~G~~D~~~~~~~~~~~~~~~~~-------------------------------------~~~~~~i~~~gH~~ 216 (435)
.++|||..|+.|.+++.. ..+.+.+.+. +.+++.+.+|||++
T Consensus 372 girVLIYsGD~D~icn~~-Gt~~~i~~L~W~g~~~f~~~~~~~~W~~~~~~~~~~~~vaG~vk~~~nLTFvtV~gAGHmV 450 (483)
T 1ac5_A 372 GIEIVLFNGDKDLICNNK-GVLDTIDNLKWGGIKGFSDDAVSFDWIHKSKSTDDSEEFSGYVKYDRNLTFVSVYNASHMV 450 (483)
T ss_dssp TCEEEEEEETTCSTTCHH-HHHHHHHHCEETTEESSCTTCEEEEEEECSSTTCCCCSCCEEEEEETTEEEEEETTCCSSH
T ss_pred CceEEEEECCcCcccCcH-HHHHHHHhcCcccccccccCCCceeeEECCccccCccccceEEEEecCeEEEEECCccccC
Confidence 589999999999999987 4555433221 24677899999999
Q ss_pred cccCchhHHHHHhhcccccccc
Q 013862 217 FLEDGVDLVTTIKGAGYYRRGR 238 (435)
Q Consensus 217 ~~e~pe~~~~~I~~~~Fl~~~~ 238 (435)
+.++|+...+.+.. ||.+..
T Consensus 451 P~dqP~~al~m~~~--fl~~~~ 470 (483)
T 1ac5_A 451 PFDKSLVSRGIVDI--YSNDVM 470 (483)
T ss_dssp HHHCHHHHHHHHHH--HTTCCE
T ss_pred cchhHHHHHHHHHH--HHCCcc
Confidence 99999999999999 886554
|
| >3aja_A Putative uncharacterized protein; alpha-beta hydrolase, serine esterase, cutinase, lipase, HYD; 2.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=92.61 E-value=0.25 Score=43.58 Aligned_cols=58 Identities=19% Similarity=0.182 Sum_probs=45.5
Q ss_pred ChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHh--------CCCceeEEEEecCCc
Q 013862 14 HFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAAR--------NPDMDLVLILANPAT 71 (435)
Q Consensus 14 s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~--------~p~~v~~lVli~~~~ 71 (435)
|..+=++++...++......++.+++|+|+|-|+.++-.++.. .+++|.++|+++-+.
T Consensus 111 S~~~G~~~~~~~i~~~~~~CP~TkiVL~GYSQGA~V~~~~~~~i~~g~~~~~~~~V~aVvLfGdP~ 176 (302)
T 3aja_A 111 SRAEGMRTTVKAMTDMNDRCPLTSYVIAGFSQGAVIAGDIASDIGNGRGPVDEDLVLGVTLIADGR 176 (302)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHHHTTCSSSCGGGEEEEEEESCTT
T ss_pred cHHHHHHHHHHHHHHHHhhCCCCcEEEEeeCchHHHHHHHHHhccCCCCCCChHHEEEEEEEeCCC
Confidence 4455667777777777777888899999999999999887743 346899999987553
|
| >1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A | Back alignment and structure |
|---|
Probab=92.45 E-value=0.076 Score=50.90 Aligned_cols=36 Identities=25% Similarity=0.202 Sum_probs=30.4
Q ss_pred CCEEEEEeChhHHHHHHHHHhC--CCceeEEEEecCCc
Q 013862 36 RPVYLVGESLGACLALAVAARN--PDMDLVLILANPAT 71 (435)
Q Consensus 36 ~~~~lvGhS~Gg~va~~~a~~~--p~~v~~lVli~~~~ 71 (435)
+++.|+|||+||.++..++... +++++++|+.++..
T Consensus 181 ~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 218 (489)
T 1qe3_A 181 DNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGAS 218 (489)
T ss_dssp EEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCC
T ss_pred ceeEEEEechHHHHHHHHHhCccccchHHHHHHhCCCC
Confidence 5799999999999998877653 57899999998864
|
| >2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A | Back alignment and structure |
|---|
Probab=91.68 E-value=0.22 Score=47.73 Aligned_cols=36 Identities=17% Similarity=0.140 Sum_probs=30.6
Q ss_pred CCEEEEEeChhHHHHHHHHHhC--CCceeEEEEecCCc
Q 013862 36 RPVYLVGESLGACLALAVAARN--PDMDLVLILANPAT 71 (435)
Q Consensus 36 ~~~~lvGhS~Gg~va~~~a~~~--p~~v~~lVli~~~~ 71 (435)
++++|+|+|.||.++..++... +..++++|+.++..
T Consensus 186 ~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 223 (498)
T 2ogt_A 186 DNITIFGESAGAASVGVLLSLPEASGLFRRAMLQSGSG 223 (498)
T ss_dssp EEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCT
T ss_pred CeEEEEEECHHHHHHHHHHhcccccchhheeeeccCCc
Confidence 5799999999999998887754 45799999999864
|
| >2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A* | Back alignment and structure |
|---|
Probab=89.81 E-value=0.27 Score=47.70 Aligned_cols=36 Identities=17% Similarity=0.113 Sum_probs=31.1
Q ss_pred CCEEEEEeChhHHHHHHHHHh--CCCceeEEEEecCCc
Q 013862 36 RPVYLVGESLGACLALAVAAR--NPDMDLVLILANPAT 71 (435)
Q Consensus 36 ~~~~lvGhS~Gg~va~~~a~~--~p~~v~~lVli~~~~ 71 (435)
+++.|+|||.||..+..++.. .+..++++|++++..
T Consensus 195 ~~Vtl~G~SaGg~~~~~~~~~~~~~~lf~~ai~~Sg~~ 232 (542)
T 2h7c_A 195 GSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVA 232 (542)
T ss_dssp EEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCT
T ss_pred cceEEEEechHHHHHHHHHhhhhhhHHHHHHhhhcCCc
Confidence 589999999999999988876 367899999998764
|
| >2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI} | Back alignment and structure |
|---|
Probab=88.94 E-value=0.23 Score=48.31 Aligned_cols=37 Identities=22% Similarity=0.208 Sum_probs=31.1
Q ss_pred CCCEEEEEeChhHHHHHHHHHh--CCCceeEEEEecCCc
Q 013862 35 NRPVYLVGESLGACLALAVAAR--NPDMDLVLILANPAT 71 (435)
Q Consensus 35 ~~~~~lvGhS~Gg~va~~~a~~--~p~~v~~lVli~~~~ 71 (435)
.+++.|+|+|.||..+..++.. .+..++++|+.++..
T Consensus 195 p~~v~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 233 (551)
T 2fj0_A 195 PDDVTLMGQSAGAAATHILSLSKAADGLFRRAILMSGTS 233 (551)
T ss_dssp EEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCT
T ss_pred hhhEEEEEEChHHhhhhccccCchhhhhhhheeeecCCc
Confidence 3579999999999999988765 466899999998864
|
| >2yij_A Phospholipase A1-iigamma; hydrolase; 2.00A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=88.41 E-value=0.082 Score=48.77 Aligned_cols=22 Identities=36% Similarity=0.424 Sum_probs=19.1
Q ss_pred CCEEEEEeChhHHHHHHHHHhC
Q 013862 36 RPVYLVGESLGACLALAVAARN 57 (435)
Q Consensus 36 ~~~~lvGhS~Gg~va~~~a~~~ 57 (435)
.++++.|||+||.+|..+|...
T Consensus 228 ~~I~vTGHSLGGALA~L~A~~L 249 (419)
T 2yij_A 228 VSITICGHSLGAALATLSATDI 249 (419)
Confidence 4799999999999999888654
|
| >2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ... | Back alignment and structure |
|---|
Probab=88.41 E-value=0.29 Score=47.57 Aligned_cols=37 Identities=22% Similarity=0.088 Sum_probs=30.4
Q ss_pred CCCEEEEEeChhHHHHHHHHHhC--CCceeEEEEecCCc
Q 013862 35 NRPVYLVGESLGACLALAVAARN--PDMDLVLILANPAT 71 (435)
Q Consensus 35 ~~~~~lvGhS~Gg~va~~~a~~~--p~~v~~lVli~~~~ 71 (435)
.++++|+|+|.||..+..++... +..++++|+.++..
T Consensus 194 p~~v~i~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 232 (543)
T 2ha2_A 194 PMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (543)
T ss_dssp EEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred hhheEEEeechHHHHHHHHHhCcccHHhHhhheeccCCc
Confidence 35899999999999998776653 46899999998864
|
| >1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=88.30 E-value=0.32 Score=47.19 Aligned_cols=37 Identities=22% Similarity=0.145 Sum_probs=30.0
Q ss_pred CCCEEEEEeChhHHHHHHHHHhC--------CCceeEEEEecCCc
Q 013862 35 NRPVYLVGESLGACLALAVAARN--------PDMDLVLILANPAT 71 (435)
Q Consensus 35 ~~~~~lvGhS~Gg~va~~~a~~~--------p~~v~~lVli~~~~ 71 (435)
.+++.|+|+|.||..+..++... +..++++|+.++..
T Consensus 208 p~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i~~Sg~~ 252 (544)
T 1thg_A 208 PDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGP 252 (544)
T ss_dssp EEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCC
T ss_pred hhHeEEEEECHHHHHHHHHHhCCCccccccccccccceEEecccc
Confidence 35799999999999988777653 45799999998753
|
| >1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A* | Back alignment and structure |
|---|
Probab=87.17 E-value=0.42 Score=46.29 Aligned_cols=37 Identities=24% Similarity=0.178 Sum_probs=29.1
Q ss_pred CCCEEEEEeChhHHHHHHHHHhC--------CCceeEEEEecCCc
Q 013862 35 NRPVYLVGESLGACLALAVAARN--------PDMDLVLILANPAT 71 (435)
Q Consensus 35 ~~~~~lvGhS~Gg~va~~~a~~~--------p~~v~~lVli~~~~ 71 (435)
.+++.|+|+|.||..+...+... +..++++|+.++..
T Consensus 200 p~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~lf~~ai~~Sg~~ 244 (534)
T 1llf_A 200 PSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGAM 244 (534)
T ss_dssp EEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCCS
T ss_pred cccEEEEEECHhHHHHHHHHcCCCccccccccchhHhHhhhccCc
Confidence 35799999999998777666553 55789999998753
|
| >1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ... | Back alignment and structure |
|---|
Probab=86.34 E-value=0.48 Score=45.82 Aligned_cols=36 Identities=25% Similarity=0.167 Sum_probs=30.4
Q ss_pred CCEEEEEeChhHHHHHHHHHhC--CCceeEEEEecCCc
Q 013862 36 RPVYLVGESLGACLALAVAARN--PDMDLVLILANPAT 71 (435)
Q Consensus 36 ~~~~lvGhS~Gg~va~~~a~~~--p~~v~~lVli~~~~ 71 (435)
+++.|+|+|.||..+..++... ...++++|++++..
T Consensus 190 ~~vti~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~ 227 (529)
T 1p0i_A 190 KSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSF 227 (529)
T ss_dssp EEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCT
T ss_pred hheEEeeccccHHHHHHHHhCccchHHHHHHHHhcCcc
Confidence 5799999999999998887764 45799999998864
|
| >1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ... | Back alignment and structure |
|---|
Probab=85.95 E-value=0.48 Score=45.93 Aligned_cols=37 Identities=22% Similarity=0.179 Sum_probs=30.4
Q ss_pred CCCEEEEEeChhHHHHHHHHHh--CCCceeEEEEecCCc
Q 013862 35 NRPVYLVGESLGACLALAVAAR--NPDMDLVLILANPAT 71 (435)
Q Consensus 35 ~~~~~lvGhS~Gg~va~~~a~~--~p~~v~~lVli~~~~ 71 (435)
.+++.|+|+|.||..+..++.. .+..++++|+.++..
T Consensus 191 p~~vtl~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~ 229 (537)
T 1ea5_A 191 PKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSP 229 (537)
T ss_dssp EEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCT
T ss_pred ccceEEEecccHHHHHHHHHhCccchhhhhhheeccCCc
Confidence 3589999999999999887764 245799999999874
|
| >1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=85.34 E-value=0.66 Score=44.74 Aligned_cols=37 Identities=14% Similarity=0.013 Sum_probs=28.9
Q ss_pred CCCEEEEEeChhHHHHHHHHHhC----CCceeEEEEecCCc
Q 013862 35 NRPVYLVGESLGACLALAVAARN----PDMDLVLILANPAT 71 (435)
Q Consensus 35 ~~~~~lvGhS~Gg~va~~~a~~~----p~~v~~lVli~~~~ 71 (435)
.+++.|+|+|.||..+...+... +..++++|+.++..
T Consensus 185 p~~v~i~G~SaGg~~v~~~l~~~~~~~~~lf~~~i~~sg~~ 225 (522)
T 1ukc_A 185 PDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFW 225 (522)
T ss_dssp EEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCC
T ss_pred chhEEEEEEChHHHHHHHHHhCCCccccccchhhhhcCCCc
Confidence 35799999999998776655543 56899999988763
|
| >2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A | Back alignment and structure |
|---|
Probab=82.53 E-value=1.1 Score=43.67 Aligned_cols=36 Identities=19% Similarity=0.123 Sum_probs=29.4
Q ss_pred CCEEEEEeChhHHHHHHHHHh--CCCceeEEEEecCCc
Q 013862 36 RPVYLVGESLGACLALAVAAR--NPDMDLVLILANPAT 71 (435)
Q Consensus 36 ~~~~lvGhS~Gg~va~~~a~~--~p~~v~~lVli~~~~ 71 (435)
+++.|+|+|.||..+..++.. ....+++.|+.++..
T Consensus 186 ~~Vti~G~SAGg~~~~~~~~~~~~~~lf~~ai~~Sg~~ 223 (579)
T 2bce_A 186 DQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGVG 223 (579)
T ss_dssp EEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCCT
T ss_pred ccEEEecccccchheeccccCcchhhHHHHHHHhcCCc
Confidence 579999999999999887764 356799999988753
|
| >1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=80.55 E-value=2.5 Score=40.20 Aligned_cols=59 Identities=15% Similarity=0.018 Sum_probs=42.9
Q ss_pred ChHHHHHHHHHHHHHhhhcCC---CCCEEEEEeChhHHHHHHHHHhC------------CCceeEEEEecCCcc
Q 013862 14 HFTGLLKLIERTIRSENCRSS---NRPVYLVGESLGACLALAVAARN------------PDMDLVLILANPATS 72 (435)
Q Consensus 14 s~~~~a~dl~~~l~~l~~~~~---~~~~~lvGhS~Gg~va~~~a~~~------------p~~v~~lVli~~~~~ 72 (435)
+.++.++|+..++...-..+| +.+++|.|+|+||..+..+|..- +-.++++.+-++...
T Consensus 143 ~~~~~a~~~~~fl~~~~~~fP~~~~~~~~i~GeSYgg~y~p~~a~~i~~~n~~~~~~~~~inLkGi~IGNg~~d 216 (483)
T 1ac5_A 143 DLEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAILNHNKFSKIDGDTYDLKALLIGNGWID 216 (483)
T ss_dssp SHHHHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHHHHHHHHHCCSTTSCCEEEEEEEEEECCC
T ss_pred CHHHHHHHHHHHHHHHHHhChhhcCCCEEEEeccccccccHHHHHHHHHhcccccccCcccceeeeEecCCccc
Confidence 567888888888877543332 36899999999999988777431 135788887777653
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 435 | ||||
| d2rhwa1 | 283 | c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2 | 2e-05 | |
| d1brta_ | 277 | c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces au | 2e-05 | |
| d1hkha_ | 279 | c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. | 2e-05 | |
| d1bn7a_ | 291 | c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus | 5e-05 | |
| d1j1ia_ | 268 | c.69.1.10 (A:) Meta cleavage compound hydrolase Ca | 6e-05 | |
| d1ehya_ | 293 | c.69.1.11 (A:) Bacterial epoxide hydrolase {Agroba | 8e-05 | |
| d1mtza_ | 290 | c.69.1.7 (A:) Tricorn interacting factor F1 {Archa | 1e-04 | |
| d1uk8a_ | 271 | c.69.1.10 (A:) Meta-cleavage product hydrolase Cum | 1e-04 | |
| d1a88a_ | 275 | c.69.1.12 (A:) Chloroperoxidase L {Streptomyces li | 2e-04 | |
| d1zd3a2 | 322 | c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, | 2e-04 | |
| d1a8sa_ | 273 | c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas flu | 3e-04 | |
| d1q0ra_ | 297 | c.69.1.28 (A:) Aclacinomycin methylesterase RdmC { | 3e-04 | |
| d1c4xa_ | 281 | c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-di | 4e-04 | |
| d1va4a_ | 271 | c.69.1.12 (A:) Arylesterase {Pseudomonas fluoresce | 4e-04 | |
| d1wm1a_ | 313 | c.69.1.7 (A:) Proline aminopeptidase {Serratia mar | 5e-04 | |
| d1a8qa_ | 274 | c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces au | 9e-04 | |
| d3c70a1 | 256 | c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber t | 0.001 | |
| d1azwa_ | 313 | c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas | 0.002 |
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Score = 44.0 bits (102), Expect = 2e-05
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 168 ARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLED 220
ARL +KA+T I D+ +P + G +L + + + F GH+ E
Sbjct: 217 ARLGEIKAKTFITWGRDDRFVP-LDHGLKLLWNIDDARLHVFSKCGHWAQWEH 268
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Score = 43.7 bits (101), Expect = 2e-05
Identities = 15/62 (24%), Positives = 24/62 (38%)
Query: 168 ARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTT 227
A + + LIL D+ LP E +ALP+ + G H L ++ T
Sbjct: 211 ADIPRIDVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLWTHAEEVNTA 270
Query: 228 IK 229
+
Sbjct: 271 LL 272
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} Length = 279 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Score = 43.4 bits (100), Expect = 2e-05
Identities = 15/58 (25%), Positives = 23/58 (39%)
Query: 172 AVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIK 229
A TLIL +D +LP + R +A+P G H L ++ +K
Sbjct: 217 AAGKPTLILHGTKDNILPIDATARRFHQAVPEADYVEVEGAPHGLLWTHADEVNAALK 274
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Score = 42.5 bits (98), Expect = 5e-05
Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Query: 167 NARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVT 226
L L+ L+P E RL +LPNC+T G G H+L ++ + +
Sbjct: 223 MNWLHQSPVPKLLFWGTPGVLIP-PAEAARLAESLPNCKTVDIGPGLHYLQEDNPDLIGS 281
Query: 227 TIK 229
I
Sbjct: 282 EIA 284
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Score = 42.1 bits (97), Expect = 6e-05
Identities = 10/60 (16%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Query: 170 LDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIK 229
+ V+ TL++ D+++P E + + + GH+ +E D
Sbjct: 204 IRKVQVPTLVVQGKDDKVVP-VETAYKFLDLIDDSWGYIIPHCGHWAMIEHPEDFANATL 262
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Score = 41.8 bits (96), Expect = 8e-05
Identities = 10/53 (18%), Positives = 18/53 (33%)
Query: 177 TLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIK 229
++ D +P + + + N GHFL +E + IK
Sbjct: 237 VTMIWGLGDTCVPYAPLIEFVPKYYSNYTMETIEDCGHFLMVEKPEIAIDRIK 289
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 290 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 41.4 bits (95), Expect = 1e-04
Identities = 11/53 (20%), Positives = 19/53 (35%), Gaps = 2/53 (3%)
Query: 168 ARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLED 220
++ A+K TLI D++ P + + + F H ED
Sbjct: 224 DKISAIKIPTLITVGEYDEVTP--NVARVIHEKIAGSELHVFRDCSHLTMWED 274
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Score = 41.3 bits (95), Expect = 1e-04
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Query: 162 ASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLED 220
A A ++ + + +TLI+ DQ++P RL + Q FG GH+ +E
Sbjct: 199 ALASSDEDIKTLPNETLIIHGREDQVVP-LSSSLRLGELIDRAQLHVFGRCGHWTQIEQ 256
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} Length = 275 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Score = 40.7 bits (93), Expect = 2e-04
Identities = 9/52 (17%), Positives = 18/52 (34%)
Query: 169 RLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLED 220
L + L+ DQ++P + + L N + + G H +
Sbjct: 210 DLKRIDVPVLVAHGTDDQVVPYADAAPKSAELLANATLKSYEGLPHGMLSTH 261
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.6 bits (93), Expect = 2e-04
Identities = 6/55 (10%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
Query: 166 ANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLED 220
+ + L++ + +D +L + + +P+ + GH+ ++
Sbjct: 251 CKSLGRKILIPALMVTAEKDFVLV-PQMSQHMEDWIPHLKRGHIEDCGHWTQMDK 304
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Score = 39.9 bits (91), Expect = 3e-04
Identities = 12/68 (17%), Positives = 22/68 (32%)
Query: 162 ASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDG 221
+ L + TL++ DQ++P E G + + + G H L
Sbjct: 201 SETDFTEDLKKIDVPTLVVHGDADQVVPIEASGIASAALVKGSTLKIYSGAPHGLTDTHK 260
Query: 222 VDLVTTIK 229
L +
Sbjct: 261 DQLNADLL 268
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Score = 39.9 bits (91), Expect = 3e-04
Identities = 16/61 (26%), Positives = 23/61 (37%), Gaps = 1/61 (1%)
Query: 168 ARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTT 227
A L V TL++ + D + P+ G L +P + G GH L L
Sbjct: 230 AELREVTVPTLVIQAEHDPIAPAPH-GKHLAGLIPTARLAEIPGMGHALPSSVHGPLAEV 288
Query: 228 I 228
I
Sbjct: 289 I 289
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} Length = 281 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Score = 39.9 bits (91), Expect = 4e-04
Identities = 9/49 (18%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Query: 172 AVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLED 220
+ L+ +D+++P + L + L + + GH+ LE
Sbjct: 220 RLPHDVLVFHGRQDRIVP-LDTSLYLTKHLKHAELVVLDRCGHWAQLER 267
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Score = 39.5 bits (90), Expect = 4e-04
Identities = 9/61 (14%), Positives = 21/61 (34%)
Query: 169 RLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTI 228
+ + TL++ DQ++P E G + + + + H + L +
Sbjct: 206 DMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAVTHAQQLNEDL 265
Query: 229 K 229
Sbjct: 266 L 266
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Score = 39.5 bits (90), Expect = 5e-04
Identities = 8/59 (13%), Positives = 14/59 (23%), Gaps = 1/59 (1%)
Query: 165 YANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVD 223
+I+ D + L +A P + G GH +
Sbjct: 245 LLRNVPLIRHIPAVIVHGRYDMACQ-VQNAWDLAKAWPEAELHIVEGAGHSYDEPGILH 302
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Score = 38.7 bits (88), Expect = 9e-04
Identities = 11/52 (21%), Positives = 24/52 (46%)
Query: 169 RLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLED 220
L TL++ DQ++P + G + + +PN + + + G H + +
Sbjct: 207 DLKKFDIPTLVVHGDDDQVVPIDATGRKSAQIIPNAELKVYEGSSHGIAMVP 258
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Score = 37.9 bits (86), Expect = 0.001
Identities = 23/191 (12%), Positives = 48/191 (25%), Gaps = 15/191 (7%)
Query: 30 NCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELM 89
V LVGES G A + + + N + ++ E+
Sbjct: 65 EALPPGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVF 124
Query: 90 SGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPK 149
T ++++ E + ++ + NIL K
Sbjct: 125 PDWKDTTYFTYTKDGKEITGLKLGFTLLRENLYTLCGPEEYELAKMLTRKGSLFQNILAK 184
Query: 150 ETLLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRF 209
+ + + + + +D++ E + +
Sbjct: 185 RPFFT--------------KEGYGSIKKIYVWTDQDEIFL-PEFQLWQIENYKPDKVYKV 229
Query: 210 GGGGHFLFLED 220
GG H L L
Sbjct: 230 EGGDHKLQLTK 240
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Score = 37.9 bits (86), Expect = 0.002
Identities = 10/49 (20%), Positives = 16/49 (32%), Gaps = 1/49 (2%)
Query: 169 RLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLF 217
+I+ D + P + L +A P Q + GH F
Sbjct: 250 AHRIADIPGVIVHGRYDVVCP-LQSAWDLHKAWPKAQLQISPASGHSAF 297
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 435 | |||
| d1c4xa_ | 281 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 99.89 | |
| d1q0ra_ | 297 | Aclacinomycin methylesterase RdmC {Streptomyces pu | 99.89 | |
| d2rhwa1 | 283 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 99.89 | |
| d1j1ia_ | 268 | Meta cleavage compound hydrolase CarC {Janthinobac | 99.89 | |
| d1uk8a_ | 271 | Meta-cleavage product hydrolase CumD {Pseudomonas | 99.88 | |
| d1brta_ | 277 | Bromoperoxidase A2 {Streptomyces aureofaciens [Tax | 99.88 | |
| d1mtza_ | 290 | Tricorn interacting factor F1 {Archaeon Thermoplas | 99.87 | |
| d1bn7a_ | 291 | Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1 | 99.87 | |
| d1hkha_ | 279 | Gamma-lactamase {Aureobacterium sp. [TaxId: 51671] | 99.87 | |
| d1b6ga_ | 310 | Haloalkane dehalogenase {Xanthobacter autotrophicu | 99.87 | |
| d3c70a1 | 256 | Hydroxynitrile lyase {Rubber tree (Hevea brasilien | 99.86 | |
| d1a8qa_ | 274 | Bromoperoxidase A1 {Streptomyces aureofaciens [Tax | 99.86 | |
| d1ehya_ | 293 | Bacterial epoxide hydrolase {Agrobacterium radioba | 99.86 | |
| d1zd3a2 | 322 | Mammalian epoxide hydrolase, C-terminal domain {Hu | 99.85 | |
| d1a88a_ | 275 | Chloroperoxidase L {Streptomyces lividans [TaxId: | 99.84 | |
| d1m33a_ | 256 | Biotin biosynthesis protein BioH {Escherichia coli | 99.84 | |
| d1azwa_ | 313 | Proline iminopeptidase {Xanthomonas campestris, pv | 99.83 | |
| d1xkla_ | 258 | Salicylic acid-binding protein 2 (SABP2) {Common t | 99.83 | |
| d1va4a_ | 271 | Arylesterase {Pseudomonas fluorescens [TaxId: 294] | 99.82 | |
| d1a8sa_ | 273 | Chloroperoxidase F {Pseudomonas fluorescens [TaxId | 99.81 | |
| d1mj5a_ | 298 | Haloalkane dehalogenase {Sphingomonas paucimobilis | 99.78 | |
| d1imja_ | 208 | Ccg1/TafII250-interacting factor B (Cib) {Human (H | 99.77 | |
| d1wm1a_ | 313 | Proline aminopeptidase {Serratia marcescens [TaxId | 99.73 | |
| d1iuqa_ | 367 | Glycerol-3-phosphate (1)-acyltransferase {Cushaw s | 99.7 | |
| d1r3da_ | 264 | Hypothetical protein VC1974 {Vibrio cholerae [TaxI | 99.69 | |
| d1pjaa_ | 268 | Palmitoyl protein thioesterase 2 {Human (Homo sapi | 99.66 | |
| d1k8qa_ | 377 | Gastric lipase {Dog (Canis familiaris) [TaxId: 961 | 99.64 | |
| d2vata1 | 376 | Acetyl-CoA:deacetylcephalosporin C acetyltransfera | 99.64 | |
| d1tqha_ | 242 | Carboxylesterase Est {Bacillus stearothermophilus | 99.61 | |
| d1qo7a_ | 394 | Bacterial epoxide hydrolase {Aspergillus niger [Ta | 99.61 | |
| d2pl5a1 | 362 | Homoserine O-acetyltransferase {Leptospira interro | 99.58 | |
| d2b61a1 | 357 | Homoserine O-acetyltransferase {Haemophilus influe | 99.57 | |
| d1jmkc_ | 230 | Surfactin synthetase, SrfA {Bacillus subtilis [Tax | 99.52 | |
| d1thta_ | 302 | Myristoyl-ACP-specific thioesterase {Vibrio harvey | 99.5 | |
| d2h7xa1 | 283 | Picromycin polyketide synthase {Streptomyces venez | 99.5 | |
| d1uxoa_ | 186 | Hypothetical protein YdeN {Bacillus subtilis [TaxI | 99.47 | |
| d2fuka1 | 218 | XC6422 protein {Xanthomonas campestris [TaxId: 339 | 99.45 | |
| d1xkta_ | 286 | Fatty acid synthase {Human (Homo sapiens) [TaxId: | 99.44 | |
| d2jbwa1 | 360 | 2,6-dihydropseudooxynicotine hydrolase {Arthrobact | 99.34 | |
| d1ispa_ | 179 | Lipase A {Bacillus subtilis [TaxId: 1423]} | 99.33 | |
| d2hu7a2 | 260 | Acylamino-acid-releasing enzyme, C-terminal donain | 99.18 | |
| d1mo2a_ | 255 | Erythromycin polyketide synthase {Saccharopolyspor | 99.14 | |
| d1fj2a_ | 229 | Acyl protein thioesterase 1 {Human (Homo sapiens) | 99.12 | |
| d1l7aa_ | 318 | Cephalosporin C deacetylase {Bacillus subtilis [Ta | 98.92 | |
| d1vkha_ | 263 | Putative serine hydrolase Ydr428c {Baker's yeast ( | 98.9 | |
| d2r8ba1 | 203 | Uncharacterized protein Atu2452 {Agrobacterium tum | 98.85 | |
| d3b5ea1 | 209 | Uncharacterized protein Mll8374 {Mesorhizobium lot | 98.84 | |
| d1jfra_ | 260 | Lipase {Streptomyces exfoliatus [TaxId: 1905]} | 98.81 | |
| d1vlqa_ | 322 | Acetyl xylan esterase TM0077 {Thermotoga maritima | 98.81 | |
| d1ufoa_ | 238 | Hypothetical protein TT1662 {Thermus thermophilus | 98.77 | |
| d2h1ia1 | 202 | Carboxylesterase {Bacillus cereus [TaxId: 1396]} | 98.75 | |
| d2bgra2 | 258 | Dipeptidyl peptidase IV/CD26, C-terminal domain {P | 98.71 | |
| d2i3da1 | 218 | Hypothetical protein Atu1826 {Agrobacterium tumefa | 98.65 | |
| d1dina_ | 233 | Dienelactone hydrolase {Pseudomonas sp., B13 [TaxI | 98.6 | |
| d1xfda2 | 258 | Dipeptidyl aminopeptidase-like protein 6, DPP6, C- | 98.56 | |
| d1cvla_ | 319 | Lipase {Chromobacterium viscosum [TaxId: 42739]} | 98.55 | |
| d1tcaa_ | 317 | Triacylglycerol lipase {Yeast (Candida antarctica) | 98.53 | |
| d2dsta1 | 122 | Hypothetical protein TTHA1544 {Thermus thermophilu | 98.52 | |
| d1auoa_ | 218 | Carboxylesterase {Pseudomonas fluorescens [TaxId: | 98.5 | |
| d1ex9a_ | 285 | Lipase {Pseudomonas aeruginosa [TaxId: 287]} | 98.44 | |
| d2pbla1 | 261 | Uncharacterized protein TM1040_2492 {Silicibacter | 98.39 | |
| d1jjfa_ | 255 | Feruloyl esterase domain of the cellulosomal xylan | 98.32 | |
| d2d81a1 | 318 | Polyhydroxybutyrate depolymerase {Penicillium funi | 98.31 | |
| d1lnsa3 | 405 | X-Prolyl dipeptidyl aminopeptidase PepX, middle do | 98.3 | |
| d1ei9a_ | 279 | Palmitoyl protein thioesterase 1 {Cow (Bos taurus) | 98.12 | |
| d3c8da2 | 246 | Enterochelin esterase, catalytic domain {Shigella | 98.1 | |
| d1ju3a2 | 347 | Bacterial cocaine esterase N-terminal domain {Rhod | 97.92 | |
| d1sfra_ | 288 | Antigen 85a {Mycobacterium tuberculosis [TaxId: 17 | 97.87 | |
| d1qfma2 | 280 | Prolyl oligopeptidase, C-terminal domain {Pig (Sus | 97.83 | |
| d1r88a_ | 267 | Antigen pt51/mpb51 {Mycobacterium tuberculosis [Ta | 97.83 | |
| d1qlwa_ | 318 | A novel bacterial esterase {Alcaligenes sp. [TaxId | 97.77 | |
| g1wht.1 | 409 | Serine carboxypeptidase II {Wheat (Triticum vulgar | 97.72 | |
| d1jkma_ | 358 | Carboxylesterase {Bacillus subtilis, brefeldin A e | 97.45 | |
| d1mpxa2 | 381 | Alpha-amino acid ester hydrolase {Xanthomonas citr | 97.45 | |
| d1dqza_ | 280 | Antigen 85c {Mycobacterium tuberculosis [TaxId: 17 | 97.42 | |
| d1u4na_ | 308 | Carboxylesterase {Alicyclobacillus acidocaldarius | 97.34 | |
| d1jjia_ | 311 | Carboxylesterase {Archaeon Archaeoglobus fulgidus | 97.32 | |
| d1wpxa1 | 421 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 97.29 | |
| d1lzla_ | 317 | Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | 97.21 | |
| d1rp1a2 | 337 | Pancreatic lipase, N-terminal domain {Dog (Canis f | 97.17 | |
| d1ivya_ | 452 | Human 'protective protein', HPP {Human (Homo sapie | 97.16 | |
| d1bu8a2 | 338 | Pancreatic lipase, N-terminal domain {Rat (Rattus | 97.04 | |
| d1ku0a_ | 388 | Lipase L1 {Bacillus stearothermophilus [TaxId: 142 | 96.77 | |
| d2b9va2 | 385 | Alpha-amino acid ester hydrolase {Acetobacter past | 96.62 | |
| d1wb4a1 | 273 | Feruloyl esterase domain of the cellulosomal xylan | 96.52 | |
| d2gzsa1 | 265 | Enterobactin and salmochelin hydrolase IroE {Esche | 96.49 | |
| d1uwca_ | 261 | Feruloyl esterase A {Aspergillus niger [TaxId: 506 | 96.37 | |
| d1lgya_ | 265 | Triacylglycerol lipase {Rhizopus niveus [TaxId: 48 | 96.36 | |
| d1tiaa_ | 271 | Triacylglycerol lipase {Penicillium camembertii [T | 96.33 | |
| d1tiba_ | 269 | Triacylglycerol lipase {Thermomyces lanuginosus, f | 96.28 | |
| d3tgla_ | 265 | Triacylglycerol lipase {Rhizomucor miehei [TaxId: | 96.16 | |
| d1pv1a_ | 299 | Hypothetical esterase YJL068C {Baker's yeast (Sacc | 95.61 | |
| d1cexa_ | 197 | Cutinase {Fungus (Fusarium solani), subsp. pisi [T | 94.47 | |
| d1ac5a_ | 483 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 93.59 | |
| g1gxs.1 | 425 | Hydroxynitrile lyase {Sorghum (Sorghum bicolor) [T | 93.5 | |
| d1qoza_ | 207 | Acetylxylan esterase {Trichoderma reesei [TaxId: 5 | 91.39 | |
| d1g66a_ | 207 | Acetylxylan esterase {Penicillium purpurogenum [Ta | 90.84 |
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Probab=99.89 E-value=3e-23 Score=184.91 Aligned_cols=211 Identities=12% Similarity=0.120 Sum_probs=126.2
Q ss_pred CccccccCCCC----CChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccc
Q 013862 2 YGACIFQLQIG----HHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSL 77 (435)
Q Consensus 2 yG~s~~p~~~~----~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~ 77 (435)
||.|..+.... ++++++++|+.+++++++. ++++++||||||.+|+.+|.++|++|+++|++++........
T Consensus 66 ~G~S~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~----~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~~~~~ 141 (281)
T d1c4xa_ 66 FGQSEYPETYPGHIMSWVGMRVEQILGLMNHFGI----EKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNAR 141 (281)
T ss_dssp STTSCCCSSCCSSHHHHHHHHHHHHHHHHHHHTC----SSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSC
T ss_pred CccccccccccccchhhHHHhhhhcccccccccc----ccceeccccccccccccccccccccccceEEeccccCccccc
Confidence 67776654433 3567889999999999987 589999999999999999999999999999999875322211
Q ss_pred cccccccccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHh
Q 013862 78 LQTIMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLE 157 (435)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (435)
....... .......................... ................. ....... ........
T Consensus 142 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~--~~~~~~~----~~~~~~~~ 206 (281)
T d1c4xa_ 142 PPELARL-LAFYADPRLTPYRELIHSFVYDPENF--------PGMEEIVKSRFEVANDP--EVRRIQE----VMFESMKA 206 (281)
T ss_dssp CHHHHHH-HTGGGSCCHHHHHHHHHTTSSCSTTC--------TTHHHHHHHHHHHHHCH--HHHHHHH----HHHHHHSS
T ss_pred hhHHHHH-HHhhhhcccchhhhhhhhhccccccc--------chhhhHHHHHhhhcccc--hhhhhhh----hhhhHHhh
Confidence 1111000 11111111111111111111111000 00000000100000000 0000000 00000000
Q ss_pred hhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhccccc
Q 013862 158 LLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYR 235 (435)
Q Consensus 158 ~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~ 235 (435)
.+ .........+.++++|+|+|+|++|.++|++ ..+.+.+.+|++++++++++||++++|+|+++++.|.+ ||+
T Consensus 207 ~~-~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~--Fl~ 280 (281)
T d1c4xa_ 207 GM-ESLVIPPATLGRLPHDVLVFHGRQDRIVPLD-TSLYLTKHLKHAELVVLDRCGHWAQLERWDAMGPMLME--HFR 280 (281)
T ss_dssp CC-GGGCCCHHHHTTCCSCEEEEEETTCSSSCTH-HHHHHHHHCSSEEEEEESSCCSCHHHHSHHHHHHHHHH--HHH
T ss_pred hh-hhhccchhhhhhhccceEEEEeCCCCCcCHH-HHHHHHHHCCCCEEEEECCCCCchHHhCHHHHHHHHHH--HhC
Confidence 00 0011123456789999999999999999999 79999999999999999999999999999999999999 875
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Probab=99.89 E-value=9.1e-23 Score=183.16 Aligned_cols=219 Identities=16% Similarity=0.072 Sum_probs=130.9
Q ss_pred CccccccC--CCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccc
Q 013862 2 YGACIFQL--QIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQ 79 (435)
Q Consensus 2 yG~s~~p~--~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~ 79 (435)
||.|..+. ...|+++++++|+..++++++. ++++++||||||.+++.+|.++|++|+++|++++..........
T Consensus 61 ~G~S~~~~~~~~~~~~~~~~~d~~~ll~~l~~----~~~~lvGhS~Gg~~a~~~a~~~P~~v~~lvli~~~~~~~~~~~~ 136 (297)
T d1q0ra_ 61 TGRSTTRDFAAHPYGFGELAADAVAVLDGWGV----DRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDAN 136 (297)
T ss_dssp STTSCCCCTTTSCCCHHHHHHHHHHHHHHTTC----SSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHH
T ss_pred Ccccccccccccccccchhhhhhccccccccc----cceeeccccccchhhhhhhcccccceeeeEEEccccccccchhh
Confidence 67776553 3458999999999999999988 48999999999999999999999999999999877533211110
Q ss_pred c-----ccccccccccchhHHHHHHHHHhhc--CChhHHHHHh------hhhc--cchhHHHHHhHHhHHhhhcchhHHh
Q 013862 80 T-----IMPIPAELMSGQMTLTLSYLLSLLT--GDPLKMAMDS------IVKG--LFLQSTIQERSQDFVAMSSYLPVLA 144 (435)
Q Consensus 80 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (435)
. .... .................... .......... .... ................ ..
T Consensus 137 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~- 208 (297)
T d1q0ra_ 137 IERVMRGEPT-LDGLPGPQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAID------HA- 208 (297)
T ss_dssp HHHHHHTCCC-SSCSCCCCHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHH------HT-
T ss_pred hHHHhhhhhh-hhhhhhhhHHHHHHHHHhccccchhhHHHHHHHHHHhhhccccccchHHHHHHHHHHhhh------hc-
Confidence 0 0000 11111111111111111110 0000000000 0000 0000000000000000 00
Q ss_pred ccCCchhhhhHHhhhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhH
Q 013862 145 NILPKETLLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDL 224 (435)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~ 224 (435)
............. .....+....+.++++||++|+|++|.+++++ ..+.+.+.+|++++++++++||+++.|+|+++
T Consensus 209 ~~~~~~~~~~~~~--~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~-~~~~~~~~~p~~~~~~i~~~gH~~~~e~p~~~ 285 (297)
T d1q0ra_ 209 GGVLAEPYAHYSL--TLPPPSRAAELREVTVPTLVIQAEHDPIAPAP-HGKHLAGLIPTARLAEIPGMGHALPSSVHGPL 285 (297)
T ss_dssp TTCCSCCCGGGGC--CCCCGGGGGGGGGCCSCEEEEEETTCSSSCTT-HHHHHHHTSTTEEEEEETTCCSSCCGGGHHHH
T ss_pred cccchhhhhhhhh--hhccccchhhhhccCCceEEEEeCCCCCCCHH-HHHHHHHhCCCCEEEEECCCCCcchhhCHHHH
Confidence 0000000000000 00111234567889999999999999999998 79999999999999999999999999999999
Q ss_pred HHHHhhccccccc
Q 013862 225 VTTIKGAGYYRRG 237 (435)
Q Consensus 225 ~~~I~~~~Fl~~~ 237 (435)
++.|.+ |++..
T Consensus 286 ~~~i~~--~l~~~ 296 (297)
T d1q0ra_ 286 AEVILA--HTRSA 296 (297)
T ss_dssp HHHHHH--HHHHT
T ss_pred HHHHHH--HHHhh
Confidence 999999 88653
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Probab=99.89 E-value=2.3e-23 Score=185.79 Aligned_cols=207 Identities=18% Similarity=0.198 Sum_probs=131.2
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
||.|..+..+.++..++++|+.+++++++. ++++++||||||.+|+.+|.++|++|+++|++++.........
T Consensus 71 ~G~S~~~~~~~~~~~~~~~~i~~li~~l~~----~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~--- 143 (283)
T d2rhwa1 71 FNKSDAVVMDEQRGLVNARAVKGLMDALDI----DRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFA--- 143 (283)
T ss_dssp STTSCCCCCSSCHHHHHHHHHHHHHHHHTC----CCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSS---
T ss_pred Ccccccccccccccchhhhhcccccccccc----cccccccccchHHHHHHHHHHhhhhcceEEEeCCCcCCcchhh---
Confidence 677877777778888999999999999988 5899999999999999999999999999999998753221110
Q ss_pred cccccccccchhHHHHHHHHHhhcCChhHHHHH-----hhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHH
Q 013862 82 MPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMD-----SIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKL 156 (435)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (435)
...... .................. ........++................... ....
T Consensus 144 ------~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~- 205 (283)
T d2rhwa1 144 ------PMPMEG---IKLLFKLYAEPSYETLKQMLQVFLYDQSLITEELLQGRWEAIQRQPEHLKNF--------LISA- 205 (283)
T ss_dssp ------CSSCHH---HHHHHHHHHSCCHHHHHHHHHHHCSCGGGCCHHHHHHHHHHHHHCHHHHHHH--------HHHH-
T ss_pred ------hhhHHH---HHHHHHHhhhhhhhhHHHHHHHhhcccccCcHHHHHHHHHHhhhhhhhhhhh--------hhhh-
Confidence 000000 011111100000000000 00011111111111111111100000000 0000
Q ss_pred hhhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhcccccc
Q 013862 157 ELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 157 ~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~ 236 (435)
........+....+.++++|+++++|++|.+++.+ ..+.+.+.++++++++++++||+++.|+|+++++.|.+ ||++
T Consensus 206 ~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~--FLk~ 282 (283)
T d2rhwa1 206 QKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLD-HGLKLLWNIDDARLHVFSKCGHWAQWEHADEFNRLVID--FLRH 282 (283)
T ss_dssp HHSCGGGGCCGGGGGGCCSCEEEEEETTCSSSCTH-HHHHHHHHSSSEEEEEESSCCSCHHHHTHHHHHHHHHH--HHHH
T ss_pred hhhhccccchHHHHhhCCCCEEEEEeCCCCCcCHH-HHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHHH--HHhC
Confidence 00000111234567889999999999999999999 78999999999999999999999999999999999999 8864
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Probab=99.89 E-value=1.1e-22 Score=179.79 Aligned_cols=204 Identities=16% Similarity=0.227 Sum_probs=127.4
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
||.|..+ ...++.+++++|+.+++++++.. ++++++||||||.+++.+|.++|++|+++|+++++......... .
T Consensus 62 ~G~S~~~-~~~~~~~~~~~~~~~~i~~l~~~---~~~~liG~S~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~-~ 136 (268)
T d1j1ia_ 62 FGKTAKP-DIEYTQDRRIRHLHDFIKAMNFD---GKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHED-L 136 (268)
T ss_dssp STTSCCC-SSCCCHHHHHHHHHHHHHHSCCS---SCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC------
T ss_pred cccccCC-ccccccccccccchhhHHHhhhc---ccceeeeccccccccchhhccChHhhheeeecCCCccccccchh-h
Confidence 5777643 45689999999999999999773 58999999999999999999999999999999987543221111 0
Q ss_pred cccccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhh
Q 013862 82 MPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKS 161 (435)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (435)
... ... . .................. ................. . . .............
T Consensus 137 ~~~-~~~-~-~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~-~----~-----~~~~~~~~~~~~~ 193 (268)
T d1j1ia_ 137 RPI-INY-D-FTREGMVHLVKALTNDGF----------KIDDAMINSRYTYATDE-A----T-----RKAYVATMQWIRE 193 (268)
T ss_dssp ------C-C-SCHHHHHHHHHHHSCTTC----------CCCHHHHHHHHHHHHSH-H----H-----HHHHHHHHHHHHH
T ss_pred hhh-hhh-h-hhhhhhHHHHHHHhhhhh----------hhhhhhhHHHHHhhhhh-h----h-----hhhhhhhhhhhhc
Confidence 000 000 0 011111111111111110 00001111100000000 0 0 0000000000000
Q ss_pred --hhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhcccccc
Q 013862 162 --ASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 162 --~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~ 236 (435)
......+.+.++++|+++|+|++|.+++++ ..+.+.+.+|++++++++++||++++|+|+++++.|.+ ||.+
T Consensus 194 ~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~--FL~~ 267 (268)
T d1j1ia_ 194 QGGLFYDPEFIRKVQVPTLVVQGKDDKVVPVE-TAYKFLDLIDDSWGYIIPHCGHWAMIEHPEDFANATLS--FLSL 267 (268)
T ss_dssp HTSSBCCHHHHTTCCSCEEEEEETTCSSSCHH-HHHHHHHHCTTEEEEEESSCCSCHHHHSHHHHHHHHHH--HHHH
T ss_pred cccccchhhhHhhCCCCEEEEEeCCCCCCCHH-HHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHHH--HHcC
Confidence 001113557889999999999999999998 79999999999999999999999999999999999999 8754
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.88 E-value=1.5e-22 Score=179.05 Aligned_cols=208 Identities=17% Similarity=0.222 Sum_probs=134.1
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
||.|..+....++.+++++++..++++++. ++++|+||||||.+++.+|.++|++++++|++++.......... .
T Consensus 63 ~G~S~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~lvG~S~Gg~ia~~~a~~~p~~~~~lil~~~~~~~~~~~~~-~ 137 (271)
T d1uk8a_ 63 FGFTDRPENYNYSKDSWVDHIIGIMDALEI----EKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEG-L 137 (271)
T ss_dssp STTSCCCTTCCCCHHHHHHHHHHHHHHTTC----CSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCSCCCCCHH-H
T ss_pred CCCccccccccccccccchhhhhhhhhhcC----CCceEeeccccceeehHHHHhhhccchheeecccCCCcccchhh-h
Confidence 688887777788999999999999999988 58999999999999999999999999999999887532211110 0
Q ss_pred cccccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhh
Q 013862 82 MPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKS 161 (435)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (435)
.. ....... ............... .............. ....................+. .
T Consensus 138 ~~--~~~~~~~-~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----~ 198 (271)
T d1uk8a_ 138 NA--VWGYTPS-IENMRNLLDIFAYDR----------SLVTDELARLRYEA-SIQPGFQESFSSMFPEPRQRWI-----D 198 (271)
T ss_dssp HH--HHTCCSC-HHHHHHHHHHHCSCG----------GGCCHHHHHHHHHH-HTSTTHHHHHHTTSCSSTHHHH-----H
T ss_pred hh--hhhccch-hHHHHHHHHHHhhhc----------ccchhHHHHHHHhh-hhchhHHHHHHhhcchhhhhhh-----h
Confidence 00 0000110 111111111111111 11111111111111 1111111111111111111111 0
Q ss_pred hhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhcccccc
Q 013862 162 ASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 162 ~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~ 236 (435)
......+.+.++++|+|+|+|++|.++|.+ ..+.+.+.++++++++++++||+++.|+|+++++.|.+ ||++
T Consensus 199 ~~~~~~~~l~~i~~P~lii~G~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~--Fl~e 270 (271)
T d1uk8a_ 199 ALASSDEDIKTLPNETLIIHGREDQVVPLS-SSLRLGELIDRAQLHVFGRCGHWTQIEQTDRFNRLVVE--FFNE 270 (271)
T ss_dssp HHCCCHHHHTTCCSCEEEEEETTCSSSCHH-HHHHHHHHCTTEEEEEESSCCSCHHHHTHHHHHHHHHH--HHHT
T ss_pred hccccHHHHHhhccceeEEecCCCCCcCHH-HHHHHHHhCCCCEEEEECCCCCchHHHCHHHHHHHHHH--HHhc
Confidence 111223567889999999999999999998 79999999999999999999999999999999999999 8864
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=99.88 E-value=5.1e-22 Score=176.05 Aligned_cols=211 Identities=13% Similarity=0.125 Sum_probs=124.0
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhH-HHHHHHHHhCCCceeEEEEecCCcccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGA-CLALAVAARNPDMDLVLILANPATSFRKSLLQT 80 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg-~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~ 80 (435)
||.|..+. ..++++++++|+.+++++++. ++++|+|||||| .++..+|.++|++|+++|++++...........
T Consensus 61 ~G~S~~~~-~~~~~~~~~~dl~~~l~~l~~----~~~~lvGhS~G~~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 135 (277)
T d1brta_ 61 FGQSSQPT-TGYDYDTFAADLNTVLETLDL----QDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDN 135 (277)
T ss_dssp STTSCCCS-SCCSHHHHHHHHHHHHHHHTC----CSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTB
T ss_pred CCcccccc-cccchhhhhhhhhhhhhccCc----ccccccccccchhhhhHHHHHhhhcccceEEEecCCCcccccchhh
Confidence 57776443 468999999999999999988 589999999996 566667888999999999999765433221111
Q ss_pred ccccccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccch-hH----HHHHhHHhHHhhhcchhHHhccCCchhhhhH
Q 013862 81 IMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFL-QS----TIQERSQDFVAMSSYLPVLANILPKETLLWK 155 (435)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (435)
.. ........ ......................... .. ........... .. ........
T Consensus 136 ~~----~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~----~~~~~~~~ 198 (277)
T d1brta_ 136 PD----GAAPQEFF---DGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWN------TA----ASGGFFAA 198 (277)
T ss_dssp TT----CSBCHHHH---HHHHHHHHHCHHHHHHHHHHHHTTHHHHBTTTBCHHHHHHHHH------HH----HHSCHHHH
T ss_pred hh----hhhhhhHH---HHHHHhhhccchhhhhhccccccccchhhhhhhhHHHhhhhhc------cc----chhhhhhh
Confidence 10 01111111 1111000000000000000000000 00 00000000000 00 00000000
Q ss_pred HhhhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhccccc
Q 013862 156 LELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYR 235 (435)
Q Consensus 156 ~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~ 235 (435)
.........+..+.+.++++|+++++|++|.+++.+...+.+.+.+|++++++++++||++++|+|++|++.|.+ ||+
T Consensus 199 ~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~--fL~ 276 (277)
T d1brta_ 199 AAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLLWTHAEEVNTALLA--FLA 276 (277)
T ss_dssp HHGGGGTTCCCTTTGGGCCSCEEEEEETTCSSSCGGGTHHHHHHHCTTSEEEEETTCCTTHHHHTHHHHHHHHHH--HHH
T ss_pred hhhhhhhhhhHHHHHHhcCccceeEeecCCCCcCHHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHHH--HHC
Confidence 000011111234567889999999999999999987446778889999999999999999999999999999999 875
Q ss_pred c
Q 013862 236 R 236 (435)
Q Consensus 236 ~ 236 (435)
+
T Consensus 277 k 277 (277)
T d1brta_ 277 K 277 (277)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.87 E-value=4.5e-23 Score=183.94 Aligned_cols=219 Identities=14% Similarity=0.107 Sum_probs=128.9
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
||.|..+....++++++++|+.++++++... ++++|+||||||.+|+.+|.++|++|+++|++++.......... .
T Consensus 63 ~G~S~~~~~~~~~~~~~~~~l~~ll~~l~~~---~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-~ 138 (290)
T d1mtza_ 63 CGRSEEPDQSKFTIDYGVEEAEALRSKLFGN---EKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKE-M 138 (290)
T ss_dssp STTSCCCCGGGCSHHHHHHHHHHHHHHHHTT---CCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHHHH-H
T ss_pred Cccccccccccccccchhhhhhhhhcccccc---cccceecccccchhhhhhhhcChhhheeeeecccccCcccchhh-h
Confidence 6888877777899999999999999998432 68999999999999999999999999999999987533211100 0
Q ss_pred cccccccccchhHHHHHHHHHhh-cCChhHHHH-Hh-h-----hhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhh
Q 013862 82 MPIPAELMSGQMTLTLSYLLSLL-TGDPLKMAM-DS-I-----VKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLL 153 (435)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (435)
... ................... ......... .. . ................. .......... . ....
T Consensus 139 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~-~~~~ 212 (290)
T d1mtza_ 139 NRL-IDELPAKYRDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAE--RRNVYRIMNG--P-NEFT 212 (290)
T ss_dssp HHH-HHTSCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTSCSSCCCHHHHHHHHHHH--HSSHHHHHTC--S-BTTB
T ss_pred hhh-hhhhhHHHHHHHHHhhhhccccchhHHHHHHHHhhhhhcccccchHHHHHHHHHHh--hhhhhhhhcc--h-hHHh
Confidence 000 1111111111111111110 011100000 00 0 00000111110000000 0000000000 0 0000
Q ss_pred hHHhhhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhccc
Q 013862 154 WKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGY 233 (435)
Q Consensus 154 ~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~F 233 (435)
. .......+....+.++++|+++++|++|.+++ + ..+.+.+.++++++++++++||++++|+|+++++.|.+ |
T Consensus 213 -~--~~~~~~~~~~~~~~~i~~P~l~i~G~~D~~~~-~-~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~--F 285 (290)
T d1mtza_ 213 -I--TGTIKDWDITDKISAIKIPTLITVGEYDEVTP-N-VARVIHEKIAGSELHVFRDCSHLTMWEDREGYNKLLSD--F 285 (290)
T ss_dssp -C--CSTTTTCBCTTTGGGCCSCEEEEEETTCSSCH-H-HHHHHHHHSTTCEEEEETTCCSCHHHHSHHHHHHHHHH--H
T ss_pred -H--hhhhhcccHHHHhhcccceEEEEEeCCCCCCH-H-HHHHHHHHCCCCEEEEECCCCCchHHhCHHHHHHHHHH--H
Confidence 0 00001112245677899999999999998765 5 58889999999999999999999999999999999999 8
Q ss_pred cccc
Q 013862 234 YRRG 237 (435)
Q Consensus 234 l~~~ 237 (435)
|.+.
T Consensus 286 L~~h 289 (290)
T d1mtza_ 286 ILKH 289 (290)
T ss_dssp HHTC
T ss_pred HHHh
Confidence 8653
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Probab=99.87 E-value=2.4e-22 Score=179.61 Aligned_cols=217 Identities=17% Similarity=0.159 Sum_probs=128.0
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
||.|..+ ...++++++++|+.+++++++. ++++|+||||||.+++.+|.++|++++++|++++............
T Consensus 66 ~G~S~~~-~~~~~~~~~~~~l~~~l~~l~~----~~~~lvGhS~Gg~ia~~~a~~~p~~~~~li~~~~~~~~~~~~~~~~ 140 (291)
T d1bn7a_ 66 MGKSDKP-DLDYFFDDHVRYLDAFIEALGL----EEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPIPTWDEWPE 140 (291)
T ss_dssp STTSCCC-SCCCCHHHHHHHHHHHHHHTTC----CSEEEEEEHHHHHHHHHHHHHCGGGEEEEEEEEECCCBCSGGGSCH
T ss_pred Ccccccc-ccccchhHHHHHHhhhhhhhcc----ccccccccccccchhHHHHHhCCcceeeeeeeccccCCccchhhhh
Confidence 6777654 4678999999999999999988 5899999999999999999999999999999987653322111000
Q ss_pred cccccccccchhHHHH--HHHHHhhcCChhHH---HHHhhhhccchhHHHHHhHHhHHhhhcc--hhHHhccCCchhhhh
Q 013862 82 MPIPAELMSGQMTLTL--SYLLSLLTGDPLKM---AMDSIVKGLFLQSTIQERSQDFVAMSSY--LPVLANILPKETLLW 154 (435)
Q Consensus 82 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 154 (435)
......... .............. ............................ ..............
T Consensus 141 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 212 (291)
T d1bn7a_ 141 -------FARETFQAFRTADVGRELIIDQNAFIEGVLPKCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNEIPIAGEP- 212 (291)
T ss_dssp -------HHHHHHHHHTSTTHHHHHHTTSCHHHHTHHHHTCSSCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBS-
T ss_pred -------hhhhHHHHHhhhhhHHHhhhhhhhhHHhhhhhhccccchHHHHHHHHHHhcchhhhHHHHHHHHHhhhhhhh-
Confidence 000000000 00000000000000 0000000001111111111100000000 00000000000000
Q ss_pred HHhhhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhcccc
Q 013862 155 KLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYY 234 (435)
Q Consensus 155 ~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl 234 (435)
.............+.++++|+++++|++|.++++. ..+++.+.++++++++++++||+++.|+|+++++.|.+ ||
T Consensus 213 --~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~~--fL 287 (291)
T d1bn7a_ 213 --ANIVALVEAYMNWLHQSPVPKLLFWGTPGVLIPPA-EAARLAESLPNCKTVDIGPGLHYLQEDNPDLIGSEIAR--WL 287 (291)
T ss_dssp --HHHHHHHHHHHHHHHHCCSCEEEEEEEECSSSCHH-HHHHHHHHSTTEEEEEEEEESSCGGGTCHHHHHHHHHH--HS
T ss_pred --chhhhhhhhhhhhhhcCCCCEEEEEeCCCCCcCHH-HHHHHHHHCCCCEEEEECCCCCchHHhCHHHHHHHHHH--HH
Confidence 00001111223456788999999999999999998 79999999999999999999999999999999999999 88
Q ss_pred cc
Q 013862 235 RR 236 (435)
Q Consensus 235 ~~ 236 (435)
+.
T Consensus 288 ~~ 289 (291)
T d1bn7a_ 288 PG 289 (291)
T ss_dssp GG
T ss_pred Hh
Confidence 64
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Probab=99.87 E-value=1.9e-21 Score=172.59 Aligned_cols=209 Identities=16% Similarity=0.164 Sum_probs=124.2
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhH-HHHHHHHHhCCCceeEEEEecCCcccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGA-CLALAVAARNPDMDLVLILANPATSFRKSLLQT 80 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg-~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~ 80 (435)
||.|..+ ...++++++++|+.+++++++. ++++|+|||||| .++..+|..+|++|.++|++++...........
T Consensus 61 ~G~S~~~-~~~~~~~~~~~di~~~i~~l~~----~~~~lvGhS~Gg~~~a~~~a~~~p~~v~~lvli~~~~~~~~~~~~~ 135 (279)
T d1hkha_ 61 FGGSSKV-NTGYDYDTFAADLHTVLETLDL----RDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDN 135 (279)
T ss_dssp STTSCCC-SSCCSHHHHHHHHHHHHHHHTC----CSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTB
T ss_pred hCCcccc-ccccchhhhhhhhhhhhhhcCc----CccccccccccccchhhhhccccccccceeEEeeccCCccccchhh
Confidence 6777654 3568999999999999999988 589999999996 667777888899999999998765432221111
Q ss_pred ccccccccccchhHHHHHHHHHhhcCChhHHHHHhh---------hhccchhHHHHHhHHhHHhhhcchhHHhccCCchh
Q 013862 81 IMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSI---------VKGLFLQSTIQERSQDFVAMSSYLPVLANILPKET 151 (435)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (435)
. ................. .......... ......+......... .........
T Consensus 136 ~-----~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~ 197 (279)
T d1hkha_ 136 P-----EGVPQEVFDGIEAAAKG---DRFAWFTDFYKNFYNLDENLGSRISEQAVTGSWNV----------AIGSAPVAA 197 (279)
T ss_dssp T-----TSBCHHHHHHHHHHHHH---CHHHHHHHHHHHHHTHHHHBTTTBCHHHHHHHHHH----------HHTSCTTHH
T ss_pred h-----hhhhHHHHHHHHHhhhh---hhhhhhhhhhhhhcccchhhhhhhhhhhhhhhhhh----------hcccchhhh
Confidence 1 11111111111000000 0000000000 0000001001000000 000011111
Q ss_pred hhhHHhhhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhc
Q 013862 152 LLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGA 231 (435)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~ 231 (435)
........... ....+.+..+++|+++++|++|.+++.+...+.+.+.+|++++++++++||+++.|+|+++++.|.+
T Consensus 198 ~~~~~~~~~~~-~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~p~~v~~~i~~- 275 (279)
T d1hkha_ 198 YAVVPAWIEDF-RSDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQAVPEADYVEVEGAPHGLLWTHADEVNAALKT- 275 (279)
T ss_dssp HHTHHHHTCBC-HHHHHHHHHHCCCEEEEEETTCSSSCTTTTHHHHHHHCTTSEEEEETTCCTTHHHHTHHHHHHHHHH-
T ss_pred hhhhhhhhccc-ccchhhhcccCCceEEEEcCCCCccCHHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHHH-
Confidence 11111111000 1112456778999999999999999875357888899999999999999999999999999999999
Q ss_pred ccccc
Q 013862 232 GYYRR 236 (435)
Q Consensus 232 ~Fl~~ 236 (435)
||++
T Consensus 276 -fl~k 279 (279)
T d1hkha_ 276 -FLAK 279 (279)
T ss_dssp -HHHC
T ss_pred -HHCc
Confidence 8753
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Probab=99.87 E-value=3e-22 Score=181.14 Aligned_cols=221 Identities=15% Similarity=0.153 Sum_probs=127.6
Q ss_pred CccccccC-CCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccccccc
Q 013862 2 YGACIFQL-QIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQT 80 (435)
Q Consensus 2 yG~s~~p~-~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~ 80 (435)
||.|..+. ...|+++++++|+.+++++++. ++++|+||||||.+|+.+|.++|++|+++|++++...........
T Consensus 85 ~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~----~~~~lvGhS~Gg~ia~~~A~~~P~~V~~lvl~~~~~~~~~~~~~~ 160 (310)
T d1b6ga_ 85 FGKSDKPVDEEDYTFEFHRNFLLALIERLDL----RNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMTDPVTQPA 160 (310)
T ss_dssp STTSCEESCGGGCCHHHHHHHHHHHHHHHTC----CSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTH
T ss_pred ccccccccccccccccccccchhhhhhhccc----cccccccceecccccccchhhhccccceEEEEcCccCCCcccchh
Confidence 78887664 4568999999999999999988 599999999999999999999999999999999875432221111
Q ss_pred ccccccccccchhHHHHHHHHHhhcCChh--HHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhh
Q 013862 81 IMPIPAELMSGQMTLTLSYLLSLLTGDPL--KMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLEL 158 (435)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (435)
.... ......... ... ......... ........ ..........+...+.. ......... ............
T Consensus 161 ~~~~-~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~ 233 (310)
T d1b6ga_ 161 FSAF-VTQPADGFT-AWK--YDLVTPSDLRLDQFMKRWA-PTLTEAEASAYAAPFPD-TSYQAGVRK-FPKMVAQRDQAC 233 (310)
T ss_dssp HHHT-TTSSTTTHH-HHH--HHHHSCSSCCHHHHHHHHS-TTCCHHHHHHHHTTCSS-GGGCHHHHH-HHHHHHSCCHHH
T ss_pred HHHH-hhcchhhhh-hhh--hhhccchhhhhhhhhhccC-ccccHHHHHHHHhhcch-hhhhhcchh-hhhhhhhhhhhh
Confidence 1101 111111110 000 011100000 00000000 00011111000000000 000000000 000000000000
Q ss_pred hhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCc-eEEEeCCCCccccccCchhHHHHHhhcccccc
Q 013862 159 LKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNC-QTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 159 ~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~-~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~ 236 (435)
.............++++|+++++|++|.+++++ ..+.+.+.+++. +++++++|||+++.|+|+.+++.|.+ |++.
T Consensus 234 ~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~-~~~~~~~~~~~~~~~~~i~~~GH~~~~e~pe~v~~~i~~--Fl~~ 309 (310)
T d1b6ga_ 234 IDISTEAISFWQNDWNGQTFMAIGMKDKLLGPD-VMYPMKALINGCPEPLEIADAGHFVQEFGEQVAREALKH--FAET 309 (310)
T ss_dssp HHHHHHHHHHHHHTCCSEEEEEEETTCSSSSHH-HHHHHHHHSTTCCCCEEETTCCSCGGGGHHHHHHHHHHH--HHHT
T ss_pred hhhhhhhhHHhhcccCCCeEEEEeCCCCCCCHH-HHHHHHHhcCCCccEEEECCCcCchhhhCHHHHHHHHHH--HHhC
Confidence 000111112244678999999999999999988 789999999886 78899999999999999999999999 8864
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Probab=99.86 E-value=1.8e-22 Score=176.30 Aligned_cols=211 Identities=12% Similarity=0.003 Sum_probs=124.8
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
||.|..++...++++++++++.++++++... ++++|+||||||.+++.+|.++|++|+++|++++.........
T Consensus 40 ~G~S~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~--- 113 (256)
T d3c70a1 40 SGVDPRQIEEIGSFDEYSEPLLTFLEALPPG---EKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCP--- 113 (256)
T ss_dssp STTCSCCGGGCCSHHHHTHHHHHHHHHSCTT---CCEEEEEETTHHHHHHHHHHHHGGGEEEEEEESCCCCCSSSCT---
T ss_pred CCCCCCCCCCCCCHHHHHHHhhhhhhhhccc---cceeecccchHHHHHHHHhhcCchhhhhhheeccccCCcccch---
Confidence 6888877777899999999999999887653 6899999999999999999999999999999997643221110
Q ss_pred cccccccccchhHHHHHHHHHhhcCChhHHHHH---hhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhh
Q 013862 82 MPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMD---SIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLEL 158 (435)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (435)
........................ .........................................
T Consensus 114 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 181 (256)
T d3c70a1 114 ---------SYVVDKLMEVFPDWKDTTYFTYTKDGKEITGLKLGFTLLRENLYTLCGPEEYELAKMLTRKGSLFQNI--- 181 (256)
T ss_dssp ---------THHHHHHHHHSCCCTTCEEEEEEETTEEEEEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCBCCCHHH---
T ss_pred ---------hhHhhhhhhhhhhhhhhHHHhhhccccccchhhhhhhhhhhhhhhhcchhhHHHhhhhhhhhhHHHhh---
Confidence 000000000000000000000000 00000000000000000000000000000000000000000
Q ss_pred hhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhccccc
Q 013862 159 LKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYR 235 (435)
Q Consensus 159 ~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~ 235 (435)
. ...........+++|+++|+|++|..++++ ..+.+.+.+|++++++++++||++++|+|+++++.|.+ |+.
T Consensus 182 ~--~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~-~~~~~~~~~p~~~~~~i~~agH~~~~e~P~~~~~~l~~--~~~ 253 (256)
T d3c70a1 182 L--AKRPFFTKEGYGSIKKIYVWTDQDEIFLPE-FQLWQIENYKPDKVYKVEGGDHKLQLTKTKEIAEILQE--VAD 253 (256)
T ss_dssp H--TTSCCCCTTTGGGSCEEEEECTTCSSSCHH-HHHHHHHHSCCSEEEECCSCCSCHHHHSHHHHHHHHHH--HHH
T ss_pred h--hhcchhhhhhccccceeEEeecCCCCCCHH-HHHHHHHHCCCCEEEEECCCCCchHHhCHHHHHHHHHH--HHH
Confidence 0 000112344557899999999999999998 78999999999999999999999999999999999998 654
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=99.86 E-value=8.6e-21 Score=167.82 Aligned_cols=214 Identities=14% Similarity=0.112 Sum_probs=122.4
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHh-CCCceeEEEEecCCcccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAAR-NPDMDLVLILANPATSFRKSLLQT 80 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~-~p~~v~~lVli~~~~~~~~~~~~~ 80 (435)
+|.|..+ ...++++++++|+.+++++++. ++++++||||||.+++.++++ +|++|++++++++...........
T Consensus 57 ~G~S~~~-~~~~~~~~~~~dl~~~l~~l~~----~~~~lvGhS~Gg~~~~~~~a~~~p~~v~~~~~~~~~~~~~~~~~~~ 131 (274)
T d1a8qa_ 57 HGHSTPV-WDGYDFDTFADDLNDLLTDLDL----RDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKN 131 (274)
T ss_dssp STTSCCC-SSCCSHHHHHHHHHHHHHHTTC----CSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSC
T ss_pred Ccccccc-cccccchhhHHHHHHHHHHhhh----hhhcccccccccchHHHHHHHhhhccceeEEEEeccCccchhhhhc
Confidence 5677644 3568999999999999999987 589999999999999987665 589999999999765332221111
Q ss_pred ccccccccccchhHHHHHH-HHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhh
Q 013862 81 IMPIPAELMSGQMTLTLSY-LLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELL 159 (435)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (435)
.... .......... .................................... ................+
T Consensus 132 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 199 (274)
T d1a8qa_ 132 PDGV-----PDEVFDALKNGVLTERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWY-------MAMAQTIEGGVRCVDAF 199 (274)
T ss_dssp TTSB-----CHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSTTCCCCHHHHHHHHH-------HHTTSCHHHHHHHHHHH
T ss_pred cchh-----hHHHHHHHHhhhhhhhHHHhhhhhhhhhhccccchhhhhhHHHHHHH-------hhhccchhhhhhHHHHh
Confidence 1000 0000000000 000000000000000000000000000000000000 00000000000011111
Q ss_pred hhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccc--cCchhHHHHHhhcccccc
Q 013862 160 KSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFL--EDGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 160 ~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~--e~pe~~~~~I~~~~Fl~~ 236 (435)
...+..+.+.++++|+++|+|++|.+++.+...+.+.+.+|++++++++++||++++ ++|++|++.|.+ ||++
T Consensus 200 --~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~~~~~p~~~~~~i~~--FL~k 274 (274)
T d1a8qa_ 200 --GYTDFTEDLKKFDIPTLVVHGDDDQVVPIDATGRKSAQIIPNAELKVYEGSSHGIAMVPGDKEKFNRDLLE--FLNK 274 (274)
T ss_dssp --HHCCCHHHHTTCCSCEEEEEETTCSSSCGGGTHHHHHHHSTTCEEEEETTCCTTTTTSTTHHHHHHHHHHH--HHTC
T ss_pred --hccchHHHHHhccceeeeeccCCCCCcCHHHHHHHHHHhCCCCEEEEECCCCCcccccccCHHHHHHHHHH--HHCc
Confidence 111223567889999999999999999987345778889999999999999999887 679999999999 8764
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Probab=99.86 E-value=1.2e-21 Score=175.16 Aligned_cols=213 Identities=10% Similarity=0.095 Sum_probs=121.1
Q ss_pred CccccccCC---CCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccccc
Q 013862 2 YGACIFQLQ---IGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLL 78 (435)
Q Consensus 2 yG~s~~p~~---~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~ 78 (435)
||.|..+.. ..++++++++|+.+++++++. ++++++||||||.+|+.+|.++|+++.++|++++.........
T Consensus 65 ~G~s~~~~~~~~~~~~~~~~a~~~~~~~~~l~~----~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 140 (293)
T d1ehya_ 65 FGDSEKPDLNDLSKYSLDKAADDQAALLDALGI----EKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVY 140 (293)
T ss_dssp STTSCCCCTTCGGGGCHHHHHHHHHHHHHHTTC----CCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC----
T ss_pred ccCCccccccccccccchhhhhHHHhhhhhcCc----cccccccccccccchhcccccCccccceeeeeeccCccccchh
Confidence 566654432 346899999999999999988 5899999999999999999999999999999998753221111
Q ss_pred ccccccccccccchhHHHHHHHHHhhcCChhH--HH-HHh-----hhhccchhHHHHHhHHhHHhhhcchhHHhccCCch
Q 013862 79 QTIMPIPAELMSGQMTLTLSYLLSLLTGDPLK--MA-MDS-----IVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKE 150 (435)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (435)
...... ......... ............... .. ... ................. .....
T Consensus 141 ~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~ 205 (293)
T d1ehya_ 141 FGLGHV-HESWYSQFH-QLDMAVEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDN-------------CMKPD 205 (293)
T ss_dssp --------CCHHHHHT-TCHHHHHHHTSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHH-------------HTSTT
T ss_pred hhhhhh-hhhhhhhhh-ccchhhhhhccchhHHHHHHHHhhhhcccccccccHHHHHhhhhc-------------cccch
Confidence 000000 000000000 000000000000000 00 000 00000011111111100 01111
Q ss_pred hhhhHHhhhhhhh-----hhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHH
Q 013862 151 TLLWKLELLKSAS-----AYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLV 225 (435)
Q Consensus 151 ~~~~~~~~~~~~~-----~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~ 225 (435)
........++... .........+++|+++|+|++|.+++.....+.+.+..+++++++++++||++++|+|++++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~Pe~~~ 285 (293)
T d1ehya_ 206 NIHGGFNYYRANIRPDAALWTDLDHTMSDLPVTMIWGLGDTCVPYAPLIEFVPKYYSNYTMETIEDCGHFLMVEKPEIAI 285 (293)
T ss_dssp HHHHHHHHHHHHSSSSCCCCCTGGGSCBCSCEEEEEECCSSCCTTHHHHHHHHHHBSSEEEEEETTCCSCHHHHCHHHHH
T ss_pred hhhhhhhhhhhccccchhhhhhhhhhccCCceEEEEeCCCCCcCHHHHHHHHHHhCCCCEEEEECCCCCchHHHCHHHHH
Confidence 1111111111100 00112334678999999999999999874456677788999999999999999999999999
Q ss_pred HHHhhccccc
Q 013862 226 TTIKGAGYYR 235 (435)
Q Consensus 226 ~~I~~~~Fl~ 235 (435)
+.|.+ |++
T Consensus 286 ~~I~~--Ffr 293 (293)
T d1ehya_ 286 DRIKT--AFR 293 (293)
T ss_dssp HHHHH--HCC
T ss_pred HHHHH--hhC
Confidence 99999 875
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.85 E-value=1.4e-21 Score=177.32 Aligned_cols=216 Identities=13% Similarity=0.095 Sum_probs=129.2
Q ss_pred CccccccC-CCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccccccc
Q 013862 2 YGACIFQL-QIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQT 80 (435)
Q Consensus 2 yG~s~~p~-~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~ 80 (435)
||.|..+. ...|+++++++|+.+++++++. ++++++||||||.+++.+|.++|++|+++|+++++..........
T Consensus 70 ~G~S~~~~~~~~~~~~~~~~~i~~l~~~l~~----~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 145 (322)
T d1zd3a2 70 YGESSAPPEIEEYCMEVLCKEMVTFLDKLGL----SQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSP 145 (322)
T ss_dssp STTSCCCSCGGGGSHHHHHHHHHHHHHHHTC----SCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCCCCSSSCH
T ss_pred ccccccccccccccccccchhhhhhhhcccc----cccccccccchHHHHHHHHHhCCccccceEEEcccccccccccch
Confidence 67776654 3458999999999999999988 589999999999999999999999999999998764322111100
Q ss_pred cccc---c------cccccchhH----HHHHHHHHhhcCChhHH------HHHhhh-----------hccchhHHHHHhH
Q 013862 81 IMPI---P------AELMSGQMT----LTLSYLLSLLTGDPLKM------AMDSIV-----------KGLFLQSTIQERS 130 (435)
Q Consensus 81 ~~~~---~------~~~~~~~~~----~~~~~~~~~~~~~~~~~------~~~~~~-----------~~~~~~~~~~~~~ 130 (435)
.... . ......... ......+.......... ...... .....+.......
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (322)
T d1zd3a2 146 LESIKANPVFDYQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYV 225 (322)
T ss_dssp HHHHHTCGGGHHHHHTTSTTHHHHHHHHTHHHHHHHHSCCTTSCCCCTTSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHH
T ss_pred hhhhhccchhhhHHhhhccchhhhhhhhhHHHHHHHHhhccchhhhhHHHHhhhhccccccccchhhhhhccHHHHHHHH
Confidence 0000 0 000000000 00000111100000000 000000 0000000000000
Q ss_pred HhHHhhhcchhHHhccCCchhhhhHHhh----hhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceE
Q 013862 131 QDFVAMSSYLPVLANILPKETLLWKLEL----LKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQT 206 (435)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~ 206 (435)
... . .......... .............++++||++|+|++|.+++++ ..+.+.+.+|++++
T Consensus 226 ~~~----------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~-~~~~~~~~~~~~~~ 290 (322)
T d1zd3a2 226 QQF----------K----KSGFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQ-MSQHMEDWIPHLKR 290 (322)
T ss_dssp HHH----------H----HHTTHHHHHTTSCHHHHHHHHHTTTTCCCCSCEEEEEETTCSSSCGG-GGTTGGGTCTTCEE
T ss_pred HHH----------h----hcccccccccccccccccccchhhhcccCCCCEEEEEeCCCCCCCHH-HHHHHHHhCCCCEE
Confidence 000 0 0000000000 011112234556789999999999999999998 68889999999999
Q ss_pred EEeCCCCccccccCchhHHHHHhhcccccccc
Q 013862 207 RRFGGGGHFLFLEDGVDLVTTIKGAGYYRRGR 238 (435)
Q Consensus 207 ~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~~~ 238 (435)
++++++||++++|+|++|++.|.+ ||+.+.
T Consensus 291 ~~i~~~gH~~~~e~p~~v~~~i~~--FL~~~~ 320 (322)
T d1zd3a2 291 GHIEDCGHWTQMDKPTEVNQILIK--WLDSDA 320 (322)
T ss_dssp EEETTCCSCHHHHSHHHHHHHHHH--HHHHHT
T ss_pred EEECCCCCchHHhCHHHHHHHHHH--HHhhcC
Confidence 999999999999999999999999 987654
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Probab=99.84 E-value=5.8e-21 Score=168.91 Aligned_cols=206 Identities=13% Similarity=0.098 Sum_probs=123.1
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeCh-hHHHHHHHHHhCCCceeEEEEecCCcccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESL-GACLALAVAARNPDMDLVLILANPATSFRKSLLQT 80 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~-Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~ 80 (435)
||.|..+. ..++++++++|+.+++++++. ++++++|||+ ||.+++.+|.++|++|+++|++++...........
T Consensus 59 ~G~s~~~~-~~~~~~~~~~~~~~~l~~l~~----~~~~~vg~s~~G~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 133 (275)
T d1a88a_ 59 HGRSDQPS-TGHDMDTYAADVAALTEALDL----RGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTN 133 (275)
T ss_dssp STTSCCCS-SCCSHHHHHHHHHHHHHHHTC----CSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTB
T ss_pred cccccccc-ccccccccccccccccccccc----cccccccccccccchhhcccccCcchhhhhhhhcccccccccchhh
Confidence 57776543 568999999999999999987 4788999997 66777888999999999999999765332221111
Q ss_pred ccccccccccchhHHHHHHHHHhhcCChhHHHHHh----h-----hhccchhHHHHHhHHhHHhhhcchhHHhccCCchh
Q 013862 81 IMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDS----I-----VKGLFLQSTIQERSQDFVAMSSYLPVLANILPKET 151 (435)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (435)
.. ...... ................... . .................. . .....
T Consensus 134 ~~-----~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~--~~~~~ 194 (275)
T d1a88a_ 134 PD-----GLPLEV---FDEFRAALAANRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGM---------M--GAANA 194 (275)
T ss_dssp TT-----SBCHHH---HHHHHHHHHHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHH---------H--SCHHH
T ss_pred hh-----hhhhhh---hhhhhhhhhhhhHHHHHhhhhhhhhhcccchhhHHHHHHHHHHHhhc---------c--cchHH
Confidence 11 111111 0000000000000000000 0 000000000000000000 0 00000
Q ss_pred hhhHHhhhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhc
Q 013862 152 LLWKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGA 231 (435)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~ 231 (435)
........ ...+..+.+.++++|+++++|++|.++|.....+.+.+..|++++++++++||++++|+|+++++.|.+
T Consensus 195 ~~~~~~~~--~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~- 271 (275)
T d1a88a_ 195 HYECIAAF--SETDFTDDLKRIDVPVLVAHGTDDQVVPYADAAPKSAELLANATLKSYEGLPHGMLSTHPEVLNPDLLA- 271 (275)
T ss_dssp HHHHHHHH--HHCCCHHHHHHCCSCEEEEEETTCSSSCSTTTHHHHHHHSTTEEEEEETTCCTTHHHHCHHHHHHHHHH-
T ss_pred HHHHHHHh--hhhhhhHHHHhhccccceeecCCCCCcCHHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHHH-
Confidence 00000000 111223567789999999999999999886356778888999999999999999999999999999999
Q ss_pred cccc
Q 013862 232 GYYR 235 (435)
Q Consensus 232 ~Fl~ 235 (435)
||+
T Consensus 272 -Fl~ 274 (275)
T d1a88a_ 272 -FVK 274 (275)
T ss_dssp -HHH
T ss_pred -HHc
Confidence 875
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Probab=99.84 E-value=9.2e-21 Score=166.14 Aligned_cols=206 Identities=15% Similarity=0.117 Sum_probs=115.7
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
||.|.. ...+++.++++ .+..+.. ++++++||||||.+++.+|.++|+++++++++++..........
T Consensus 48 ~G~S~~--~~~~~~~d~~~----~~~~~~~----~~~~l~GhS~Gg~ia~~~a~~~p~~~~~l~~~~~~~~~~~~~~~-- 115 (256)
T d1m33a_ 48 FGRSRG--FGALSLADMAE----AVLQQAP----DKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEW-- 115 (256)
T ss_dssp STTCCS--CCCCCHHHHHH----HHHTTSC----SSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTB--
T ss_pred CCCccc--ccccccccccc----ccccccc----cceeeeecccchHHHHHHHHhCCcccceeeeeecccccccchhh--
Confidence 566642 23345554433 3333333 58999999999999999999999999999999876543322111
Q ss_pred cccccccccchhHHHHHHHHHhhcCChhHH-HHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhh
Q 013862 82 MPIPAELMSGQMTLTLSYLLSLLTGDPLKM-AMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLK 160 (435)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (435)
......................... ......................... ..............+
T Consensus 116 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~- 181 (256)
T d1m33a_ 116 -----PGIKPDVLAGFQQQLSDDQQRTVERFLALQTMGTETARQDARALKKTVLAL--------PMPEVDVLNGGLEIL- 181 (256)
T ss_dssp -----CSBCHHHHHHHHHHHHHHHHHHHHHHHHTTSTTSTTHHHHHHHHHHHHHTS--------CCCCHHHHHHHHHHH-
T ss_pred -----hhhHHHHHHHHHhhhhhhhHHHHHHHhhhhhccccchhhHHHHHHHhhhhc--------chhhHHHHHhhhhhh-
Confidence 1111111101110000000000000 0000000000011111111110000 000011111111111
Q ss_pred hhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhccccccc
Q 013862 161 SASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRRG 237 (435)
Q Consensus 161 ~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~~ 237 (435)
...+..+.+.++++|+++|+|++|.++|.+ ..+.+.+.+|++++++++++||++++|+|++|++.|.+ |+++.
T Consensus 182 -~~~~~~~~l~~i~~P~lii~G~~D~~~p~~-~~~~l~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~--fl~~i 254 (256)
T d1m33a_ 182 -KTVDLRQPLQNVSMPFLRLYGYLDGLVPRK-VVPMLDKLWPHSESYIFAKAAHAPFISHPAEFCHLLVA--LKQRV 254 (256)
T ss_dssp -HHCCCTTGGGGCCSCEEEEEETTCSSSCGG-GCC-CTTTCTTCEEEEETTCCSCHHHHSHHHHHHHHHH--HHTTS
T ss_pred -cccchHHHHHhccCCccccccccCCCCCHH-HHHHHHHHCCCCEEEEECCCCCchHHHCHHHHHHHHHH--HHHHc
Confidence 111234677889999999999999999998 78899999999999999999999999999999999999 88754
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Probab=99.83 E-value=2.8e-20 Score=168.42 Aligned_cols=217 Identities=15% Similarity=0.052 Sum_probs=118.1
Q ss_pred Ccccccc-CCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccccccc
Q 013862 2 YGACIFQ-LQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQT 80 (435)
Q Consensus 2 yG~s~~p-~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~ 80 (435)
||.|..+ ....|+++++++|+.+++++++. ++++|+||||||.+++.+|.++|++|+++|++++...........
T Consensus 71 ~G~S~~~~~~~~~~~~~~~~dl~~~~~~l~~----~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~ 146 (313)
T d1azwa_ 71 SGRSTPHADLVDNTTWDLVADIERLRTHLGV----DRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFLLRRFELEWF 146 (313)
T ss_dssp STTSBSTTCCTTCCHHHHHHHHHHHHHHTTC----SSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHH
T ss_pred cCCCCccccccchhHHHHHHHHHHHHHhhcc----ccceeEEecCCcHHHHHHHHHhhhceeeeeEeccccccccchhhh
Confidence 7888755 45568999999999999999998 589999999999999999999999999999999875432211100
Q ss_pred ccccccccccchhHHHHHHHHHhhc----CChhHHHHHhhhhccch--hHHHHHhHHhHHh--hhcchhHHhccCCchhh
Q 013862 81 IMPIPAELMSGQMTLTLSYLLSLLT----GDPLKMAMDSIVKGLFL--QSTIQERSQDFVA--MSSYLPVLANILPKETL 152 (435)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 152 (435)
.... ...+ .......+..... ................. ......+...... .................
T Consensus 147 ~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (313)
T d1azwa_ 147 YQEG-ASRL---FPDAWEHYLNAIPPVERADLMSAFHRRLTSDDEATRLAAAKAWSVWEGATSFLHVDEDFVTGHEDAHF 222 (313)
T ss_dssp HTSS-HHHH---CHHHHHHHHHTSCGGGTTSHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHTCHHH
T ss_pred hhcc-cchh---hhHHHHHHHHhhhhhhhhhhhhhhhhhhcCccHHHHHHHHHhhhhccccccccccchhhhcccchhHH
Confidence 0000 0000 0001111111100 00000000000000000 0000000000000 00000000000000000
Q ss_pred hhH-----------HhhhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCc
Q 013862 153 LWK-----------LELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDG 221 (435)
Q Consensus 153 ~~~-----------~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p 221 (435)
... .................+++|+++|+|++|.++|++ ..+.+.+.+|++++++++++||+++ +|
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~p~~-~~~~l~~~~p~a~~~~i~~aGH~~~--ep 299 (313)
T d1azwa_ 223 ALAFARIENHYFVNGGFFEVEDQLLRDAHRIADIPGVIVHGRYDVVCPLQ-SAWDLHKAWPKAQLQISPASGHSAF--EP 299 (313)
T ss_dssp HHHHHHHHHHHHHTGGGCSSTTHHHHTGGGGTTCCEEEEEETTCSSSCHH-HHHHHHHHCTTSEEEEETTCCSSTT--SH
T ss_pred HHHHhHHHHHHHhhccccccchhhhHhhhhcCCCCEEEEEECCCCCCCHH-HHHHHHHHCCCCEEEEECCCCCCCC--Cc
Confidence 000 000001111223455678899999999999999999 7999999999999999999999976 46
Q ss_pred hhHHHHHh
Q 013862 222 VDLVTTIK 229 (435)
Q Consensus 222 e~~~~~I~ 229 (435)
+.+.++|+
T Consensus 300 ~~~~~li~ 307 (313)
T d1azwa_ 300 ENVDALVR 307 (313)
T ss_dssp HHHHHHHH
T ss_pred hHHHHHHH
Confidence 65554443
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=99.83 E-value=1.2e-21 Score=170.89 Aligned_cols=209 Identities=11% Similarity=0.057 Sum_probs=127.2
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI 81 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~ 81 (435)
||.|..+.+..+++++++.|+..+++..... ++++++||||||.+++.++.++|++++++|++++...........
T Consensus 40 ~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~lvghS~Gg~va~~~a~~~p~~~~~lil~~~~~~~~~~~~~~- 115 (258)
T d1xkla_ 40 SGTDLRKIEELRTLYDYTLPLMELMESLSAD---EKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSF- 115 (258)
T ss_dssp STTCCCCGGGCCSHHHHHHHHHHHHHTSCSS---SCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTH-
T ss_pred CCCCCCCCCCCcchHHHHHHHhhhhhccccc---ccccccccchhHHHHHHHhhhhccccceEEEecccCCCcccchHH-
Confidence 7888888788899999999999999987663 689999999999999999999999999999999775322111000
Q ss_pred cccccccccchhHHHHHHHHHhhcCChhHHH--------HHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhh
Q 013862 82 MPIPAELMSGQMTLTLSYLLSLLTGDPLKMA--------MDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLL 153 (435)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (435)
................. .........................................
T Consensus 116 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (258)
T d1xkla_ 116 --------------VLEQYNERTPAENWLDTQFLPYGSPEEPLTSMFFGPKFLAHKLYQLCSPEDLALASSLVRPSSLFM 181 (258)
T ss_dssp --------------HHHHHHHTSCTTTTTTCEEEECSCTTSCCEEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCBCCCH
T ss_pred --------------HHHHHhhhhhhhhhhhhhhhhhhhhhhhcccccccHHHHHHHhhhcccHHHHHHhhhhhhhhhhhh
Confidence 00000000000000000 00000000000000000000000000000000000000000
Q ss_pred hHHhhhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhccc
Q 013862 154 WKLELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGY 233 (435)
Q Consensus 154 ~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~F 233 (435)
.. + ........+..+++|+++|+|++|.++|++ ..+.+.+.+|++++++++++||++++|+|+++++.|.+ |
T Consensus 182 ~~---~--~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~P~~~~~~l~e--~ 253 (258)
T d1xkla_ 182 ED---L--SKAKYFTDERFGSVKRVYIVCTEDKGIPEE-FQRWQIDNIGVTEAIEIKGADHMAMLCEPQKLCASLLE--I 253 (258)
T ss_dssp HH---H--HHCCCCCTTTGGGSCEEEEEETTCTTTTHH-HHHHHHHHHCCSEEEEETTCCSCHHHHSHHHHHHHHHH--H
T ss_pred hh---h--hhhhhcccccccccceeEeeecCCCCCCHH-HHHHHHHHCCCCEEEEECCCCCchHHhCHHHHHHHHHH--H
Confidence 00 0 011123456678999999999999999998 79999999999999999999999999999999999999 7
Q ss_pred ccc
Q 013862 234 YRR 236 (435)
Q Consensus 234 l~~ 236 (435)
+++
T Consensus 254 ~~k 256 (258)
T d1xkla_ 254 AHK 256 (258)
T ss_dssp HHH
T ss_pred HHh
Confidence 653
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.82 E-value=2.4e-19 Score=157.75 Aligned_cols=208 Identities=14% Similarity=0.122 Sum_probs=120.9
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHH-HHHHhCCCceeEEEEecCCcccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLAL-AVAARNPDMDLVLILANPATSFRKSLLQT 80 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~-~~a~~~p~~v~~lVli~~~~~~~~~~~~~ 80 (435)
||.|..+ ...++++++++|+.+++++++. ++++++|||+||.++. .+|.++|+++++++++++...........
T Consensus 57 ~G~S~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~vg~s~gG~~~~~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~ 131 (271)
T d1va4a_ 57 FGRSDQP-WTGNDYDTFADDIAQLIEHLDL----KEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDY 131 (271)
T ss_dssp STTSCCC-SSCCSHHHHHHHHHHHHHHHTC----CSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTB
T ss_pred ccccccc-ccccccccccccceeeeeecCC----CcceeeccccccccccccccccccceeeEEEeecccccccccchhh
Confidence 5677644 4568999999999999999988 5899999999887655 56777899999999998775432221111
Q ss_pred ccccccccccch-hHHHHHHHHHh---hcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHH
Q 013862 81 IMPIPAELMSGQ-MTLTLSYLLSL---LTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKL 156 (435)
Q Consensus 81 ~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (435)
.. ..... ........... ............................... ..... ...
T Consensus 132 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~---~~~ 192 (271)
T d1va4a_ 132 PQ-----GVPLDVFARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIAL-----------LASLK---ATV 192 (271)
T ss_dssp TT-----SBCHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHH-----------HSCHH---HHH
T ss_pred hh-----hhhhhHHHHHHHHhhhhhhhhhhhhcchhhcccchhhhhhhHHHHHHhhhh-----------hhhhh---hhh
Confidence 10 01100 00000000000 0000000000000000000000000000000 00000 000
Q ss_pred hhhhh-hhhhhhhhcccccceEEEEeeCCCCCCCChhHHHH-HHhhCCCceEEEeCCCCccccccCchhHHHHHhhcccc
Q 013862 157 ELLKS-ASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDR-LCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYY 234 (435)
Q Consensus 157 ~~~~~-~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~-~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl 234 (435)
..+.. ...+....+.++++|+++++|++|.+++.+ ...+ +.+..+++++++++++||++++|+|+++++.|.+ ||
T Consensus 193 ~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~--fL 269 (271)
T d1va4a_ 193 DCVTAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFE-TTGKVAAELIKGAELKVYKDAPHGFAVTHAQQLNEDLLA--FL 269 (271)
T ss_dssp HHHHHHHHCCCHHHHHHCCSCEEEEEETTCSSSCGG-GTHHHHHHHSTTCEEEEETTCCTTHHHHTHHHHHHHHHH--HH
T ss_pred hcccccchhhhhhhhhhcccceeecccCCCCCCCHH-HHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHHH--HH
Confidence 11110 111224567789999999999999999988 4544 4677899999999999999999999999999999 88
Q ss_pred cc
Q 013862 235 RR 236 (435)
Q Consensus 235 ~~ 236 (435)
++
T Consensus 270 ~k 271 (271)
T d1va4a_ 270 KR 271 (271)
T ss_dssp TC
T ss_pred Cc
Confidence 64
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.81 E-value=1.2e-19 Score=160.13 Aligned_cols=210 Identities=12% Similarity=0.046 Sum_probs=119.3
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHH-HHHhCCCceeEEEEecCCcccccccccc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALA-VAARNPDMDLVLILANPATSFRKSLLQT 80 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~-~a~~~p~~v~~lVli~~~~~~~~~~~~~ 80 (435)
||.|..+. ..++++++++|+.+++++++. ++.+++|||+||.++.. +|..+|++|++++++++...........
T Consensus 57 ~G~S~~~~-~~~~~~~~~~~~~~~l~~l~~----~~~~lvg~s~gG~~~~~~~a~~~p~~v~~~~l~~~~~~~~~~~~~~ 131 (273)
T d1a8sa_ 57 HGRSSQPW-SGNDMDTYADDLAQLIEHLDL----RDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEAN 131 (273)
T ss_dssp STTSCCCS-SCCSHHHHHHHHHHHHHHTTC----CSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSC
T ss_pred cCcccccc-ccccccchHHHHHHHHHhcCc----cceeeeeeccCCccchhhhhhhhhhccceeEEEecccccccccccc
Confidence 57776544 568999999999999999987 48899999998865555 5566799999999998775432222111
Q ss_pred ccccccccccchhHH-HH---HHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHH
Q 013862 81 IMPIPAELMSGQMTL-TL---SYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKL 156 (435)
Q Consensus 81 ~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (435)
.... .......... .. .............. ..................... . ..........
T Consensus 132 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~----------~-~~~~~~~~~~ 197 (273)
T d1a8sa_ 132 PGGL-PMEVFDGIRQASLADRSQLYKDLASGPFFG--FNQPGAKSSAGMVDWFWLQGM----------A-AGHKNAYDCI 197 (273)
T ss_dssp TTSB-CHHHHHHHHHHHHHHHHHHHHHHHHTTSSS--TTSTTCCCCHHHHHHHHHHHH----------H-SCHHHHHHHH
T ss_pred cccc-hhhhhhhHHHHHHHHHHHHHHHHhhhhhhh--cccchhhhhHHHHHHHHHhhc----------c-cchhhhhhhH
Confidence 1100 0000000000 00 00000000000000 000000000011100000000 0 0000000000
Q ss_pred hhhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHH-HhhCCCceEEEeCCCCccccccCchhHHHHHhhccccc
Q 013862 157 ELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRL-CRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYR 235 (435)
Q Consensus 157 ~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~-~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~ 235 (435)
..+ ......+.+.++++|+++++|++|.+++.+ ..+.+ .+..+++++++++++||++++|+|+++++.|.+ ||+
T Consensus 198 ~~~--~~~~~~~~~~~i~~Pvlii~g~~D~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~--Fl~ 272 (273)
T d1a8sa_ 198 KAF--SETDFTEDLKKIDVPTLVVHGDADQVVPIE-ASGIASAALVKGSTLKIYSGAPHGLTDTHKDQLNADLLA--FIK 272 (273)
T ss_dssp HHH--HHCCCHHHHHTCCSCEEEEEETTCSSSCST-TTHHHHHHHSTTCEEEEETTCCSCHHHHTHHHHHHHHHH--HHH
T ss_pred HHh--hhhhhhHHHHhhccceEEEecCCCCCCCHH-HHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHHH--HcC
Confidence 001 111224567889999999999999999988 45555 456789999999999999999999999999999 875
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Probab=99.78 E-value=4.5e-19 Score=157.96 Aligned_cols=226 Identities=12% Similarity=0.052 Sum_probs=117.9
Q ss_pred CccccccCCC---CCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccccc
Q 013862 2 YGACIFQLQI---GHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLL 78 (435)
Q Consensus 2 yG~s~~p~~~---~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~ 78 (435)
||.|..+... .+...+..+++..++..... .++++++||||||.+++.+|.++|++|.+++++++.........
T Consensus 65 ~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l~~~~~~~~~~~~~~ 141 (298)
T d1mj5a_ 65 MGDSDKLDPSGPERYAYAEHRDYLDALWEALDL---GDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWAD 141 (298)
T ss_dssp STTSCCCSSCSTTSSCHHHHHHHHHHHHHHTTC---TTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGG
T ss_pred CCCCCCCccccccccccchhhhhhccccccccc---cccCeEEEecccchhHHHHHHHHHhhhheeeccccccccccchh
Confidence 5666655332 34566666666666655543 36899999999999999999999999999999987754322211
Q ss_pred ccccccccccccchhHHHHHHHHHhhcCChhHHH-HHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHh
Q 013862 79 QTIMPIPAELMSGQMTLTLSYLLSLLTGDPLKMA-MDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLE 157 (435)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (435)
...... ............... ......... .............................................
T Consensus 142 ~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (298)
T d1mj5a_ 142 FPEQDR---DLFQAFRSQAGEELV-LQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPA 217 (298)
T ss_dssp SCGGGH---HHHHHHHSTTHHHHH-TTTCHHHHTHHHHTSSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSH
T ss_pred hhhhhh---hhhhhhhhhhhhhhh-hhhhhhhhhhccccccccchhhhhhhhhhhhccchhhhhhhhhhhhhhhhcchhh
Confidence 000000 000000000000000 000000000 000000000111111111000000000000000000000000000
Q ss_pred hhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhccccccc
Q 013862 158 LLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRRG 237 (435)
Q Consensus 158 ~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~~ 237 (435)
............+..+++|+++++|++|.+.+ . ..+.+.+.+|++++++++ +||++++|+|+++++.|.+ ||++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~P~l~i~g~~d~~~~-~-~~~~~~~~~p~~~~~~~~-~GH~~~~e~P~~v~~~i~~--fl~~~ 292 (298)
T d1mj5a_ 218 DVVAIARDYAGWLSESPIPKLFINAEPGALTT-G-RMRDFCRTWPNQTEITVA-GAHFIQEDSPDEIGAAIAA--FVRRL 292 (298)
T ss_dssp HHHHHHHHHHHHHTTCCSCEEEEEEEECSSSS-H-HHHHHHTTCSSEEEEEEE-ESSCGGGTCHHHHHHHHHH--HHHHH
T ss_pred hhhhhhhhhhhhhhhcceeEEEEecCCCCcCh-H-HHHHHHHHCCCCEEEEeC-CCCchHHhCHHHHHHHHHH--HHhhh
Confidence 01111222345677889999999999998765 4 478889999998887765 7999999999999999999 99875
Q ss_pred cc
Q 013862 238 RI 239 (435)
Q Consensus 238 ~~ 239 (435)
+.
T Consensus 293 ~~ 294 (298)
T d1mj5a_ 293 RP 294 (298)
T ss_dssp SC
T ss_pred cc
Confidence 43
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.77 E-value=9.2e-20 Score=154.27 Aligned_cols=136 Identities=15% Similarity=0.172 Sum_probs=110.3
Q ss_pred CccccccC-CCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccccccc
Q 013862 2 YGACIFQL-QIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQT 80 (435)
Q Consensus 2 yG~s~~p~-~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~ 80 (435)
||.|..+. ...++..+.++++.++++.++. ++++|+||||||.+++.+|.++|++++++|+++|...
T Consensus 71 ~G~S~~~~~~~~~~~~~~~~~l~~~~~~l~~----~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lV~~~p~~~-------- 138 (208)
T d1imja_ 71 LGHSKEAAAPAPIGELAPGSFLAAVVDALEL----GPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICT-------- 138 (208)
T ss_dssp SGGGTTSCCSSCTTSCCCTHHHHHHHHHHTC----CSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCG--------
T ss_pred ccCCCCCCcccccchhhhhhhhhhccccccc----ccccccccCcHHHHHHHHHHHhhhhcceeeecCcccc--------
Confidence 67776553 3446677778889999999987 5899999999999999999999999999999987631
Q ss_pred ccccccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhh
Q 013862 81 IMPIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLK 160 (435)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (435)
...
T Consensus 139 ------~~~----------------------------------------------------------------------- 141 (208)
T d1imja_ 139 ------DKI----------------------------------------------------------------------- 141 (208)
T ss_dssp ------GGS-----------------------------------------------------------------------
T ss_pred ------ccc-----------------------------------------------------------------------
Confidence 000
Q ss_pred hhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhcccccc
Q 013862 161 SASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 161 ~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~ 236 (435)
..+.+.++++|+|+|+|++|.++|.. .+..+.++++++.+++++||.+++|+|++|.+.+.+ ||+.
T Consensus 142 -----~~~~~~~i~~P~Lii~G~~D~~~~~~---~~~~~~~~~~~~~~i~~~gH~~~~~~p~~~~~~l~~--Fl~~ 207 (208)
T d1imja_ 142 -----NAANYASVKTPALIVYGDQDPMGQTS---FEHLKQLPNHRVLIMKGAGHPCYLDKPEEWHTGLLD--FLQG 207 (208)
T ss_dssp -----CHHHHHTCCSCEEEEEETTCHHHHHH---HHHHTTSSSEEEEEETTCCTTHHHHCHHHHHHHHHH--HHHT
T ss_pred -----ccccccccccccccccCCcCcCCcHH---HHHHHhCCCCeEEEECCCCCchhhhCHHHHHHHHHH--HHhc
Confidence 01223467899999999999987654 345577899999999999999999999999999999 8864
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Probab=99.73 E-value=8.2e-17 Score=143.97 Aligned_cols=218 Identities=17% Similarity=0.069 Sum_probs=118.1
Q ss_pred Ccccccc-CCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccccccc
Q 013862 2 YGACIFQ-LQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQT 80 (435)
Q Consensus 2 yG~s~~p-~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~ 80 (435)
+|.|..+ ....++..++++|+..++++++. ++++++|||+||.++..+|..+|++|++++++++...........
T Consensus 71 ~G~S~~~~~~~~~~~~~~~~d~~~~~~~~~~----~~~~~vg~s~g~~~~~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~ 146 (313)
T d1wm1a_ 71 CGRSRPHASLDNNTTWHLVADIERLREMAGV----EQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRLHWY 146 (313)
T ss_dssp STTCBSTTCCTTCSHHHHHHHHHHHHHHTTC----SSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHH
T ss_pred cccccccccccccchhhHHHHHHhhhhccCC----CcceeEeeecCCchhhHHHHHHhhhheeeeecccccccccccccc
Confidence 5777654 44568899999999999999988 589999999999999999999999999999998775332111100
Q ss_pred ccccccccccchhHHHHHHHHHhhcCChhHHH--HHhhhhccchhHHHHHhHHhHHhhh----c--chhHHhccCCchhh
Q 013862 81 IMPIPAELMSGQMTLTLSYLLSLLTGDPLKMA--MDSIVKGLFLQSTIQERSQDFVAMS----S--YLPVLANILPKETL 152 (435)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~~ 152 (435)
.... .... .................... ......................... . ..............
T Consensus 147 ~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (313)
T d1wm1a_ 147 YQDG-ASRF---FPEKWERVLSILSDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFA 222 (313)
T ss_dssp HTSS-GGGT---SHHHHHHHHTTSCTTGGGCHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTSSSSCCGGGGGGGCHHHH
T ss_pred cccc-cchh---hhhhhhhhhhhhhhhhhhhhhhhhhhcccchhhhhhhhhhhhhhhhhhhhhhcccchhhhhhhhhhHH
Confidence 0000 0000 00000000000000000000 0000000000000000000000000 0 00000000000000
Q ss_pred hh-------H---HhhhhhhhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCch
Q 013862 153 LW-------K---LELLKSASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGV 222 (435)
Q Consensus 153 ~~-------~---~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe 222 (435)
.. . ..............+..+++||++|+|++|.++|++ .++.+++.+|++++++++++||++ ++|+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G~~D~~~p~~-~~~~l~~~~p~a~~~~i~~aGH~~--~eP~ 299 (313)
T d1wm1a_ 223 LAFARIENHYFTHLGFLESDDQLLRNVPLIRHIPAVIVHGRYDMACQVQ-NAWDLAKAWPEAELHIVEGAGHSY--DEPG 299 (313)
T ss_dssp HHHHHHHHHHHHTGGGCSSTTHHHHTGGGGTTSCEEEEEETTCSSSCHH-HHHHHHHHCTTSEEEEETTCCSST--TSHH
T ss_pred hhhhhhhhhhhhhhcccccchhhhhhhhhhCCCCEEEEEECCCCccCHH-HHHHHHHHCCCCEEEEECCCCCCc--CCch
Confidence 00 0 000001111223455668999999999999999999 799999999999999999999964 4688
Q ss_pred hHHHHHhh
Q 013862 223 DLVTTIKG 230 (435)
Q Consensus 223 ~~~~~I~~ 230 (435)
.++++|+.
T Consensus 300 ~~~~lv~a 307 (313)
T d1wm1a_ 300 ILHQLMIA 307 (313)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88777654
|
| >d1iuqa_ c.112.1.1 (A:) Glycerol-3-phosphate (1)-acyltransferase {Cushaw squash (Cucurbita moschata) [TaxId: 3662]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Glycerol-3-phosphate (1)-acyltransferase superfamily: Glycerol-3-phosphate (1)-acyltransferase family: Glycerol-3-phosphate (1)-acyltransferase domain: Glycerol-3-phosphate (1)-acyltransferase species: Cushaw squash (Cucurbita moschata) [TaxId: 3662]
Probab=99.70 E-value=3.5e-18 Score=151.80 Aligned_cols=128 Identities=13% Similarity=0.053 Sum_probs=96.6
Q ss_pred cCCCCCCCCEEEEecCCcccchhHhhhHHHhhh---cCceeeeeccccccccccCCCCCCcchHHHHHHhCCccccHH--
Q 013862 285 LSGIPSEGPVLLVGNHMLLGLEALPMVPTFVIE---RNILVRAIAHPMVFFNAKDGGLPDLVTYDTFRIMGSVPVSAI-- 359 (435)
Q Consensus 285 ~~~~p~~~~~i~v~nH~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~-- 359 (435)
.|++|+.+++|++|||+|.. |.+++...+... ..+.++++++..+|+.|+ ++.+++..|+++|+|+
T Consensus 123 ~Ekl~~g~nVIlvSNHqS~~-D~~il~~ll~~~~~~l~r~i~f~Ak~~l~~~Pl--------~~~f~~~~g~I~V~rk~~ 193 (367)
T d1iuqa_ 123 EEKLQQGHNVVLISNHQTEA-DPAIISLLLEKTNPYIAENTIFVAGDRVLADPL--------CKPFSIGRNLICVYSKKH 193 (367)
T ss_dssp HHHHHTTCEEEEEECCCCTT-HHHHHHHHHTTTCHHHHHHCEEEECTHHHHCTT--------THHHHHTSEEEECCCGGG
T ss_pred HHHhcCCCCEEEEECCcccc-cHHHHHHHHhccccccccceEEEeehhhhccHH--------HHHHHHhCCEEEEecccc
Confidence 47788889999999999984 554544443221 125589999999998875 8889999999998653
Q ss_pred --------------------HHHHHhcCC-CeEEEecCccccccc-cCCccceeecCCchhH----HHHHHHcCCC--EE
Q 013862 360 --------------------NFYKLVSSK-AHVLLYPGGVREAFH-RKGEEYKLFWPESSEF----VRVAAAFGGK--IV 411 (435)
Q Consensus 360 --------------------~~~~~l~~g-~~~~ifPeG~~~~~~-~~~~~~~~~~~~~~g~----~~~a~~~~~~--iv 411 (435)
.+.+.|++| .+|+|||||||+... .+|+.+.-. |+++. ++||.++++| |+
T Consensus 194 i~~~p~l~~~~~~~~~~al~~~~~lL~~Gg~~v~IfPEGTRsr~~~~dg~l~p~~--F~~~~~~~~~~LA~~sgvP~hV~ 271 (367)
T d1iuqa_ 194 MFDIPELTETKRKANTRSLKEMALLLRGGSQLIWIAPSGGRDRPDPSTGEWYPAP--FDASSVDNMRRLIQHSDVPGHLF 271 (367)
T ss_dssp TTSSGGGHHHHHHHHHHHHHHHHHHHHHCCCEEEECTTCSCCCBCTTTCCBCCCC--CCHHHHHHHHHHHHTSSSCEEEE
T ss_pred ccccccccchhhhhhhHHHHHHHHHhhcCCeEEEEeccCcccCcccccccccccc--cCccchHHHHHHHhcCCCCceEe
Confidence 556677777 567899999998432 355555433 56554 7899999999 99
Q ss_pred EEEEecchhhhh
Q 013862 412 PFGVVGEDDLAQ 423 (435)
Q Consensus 412 Pv~~~g~~~~~~ 423 (435)
||++.|.+.+..
T Consensus 272 Pvai~~~d~~pP 283 (367)
T d1iuqa_ 272 PLALLCHDIMPP 283 (367)
T ss_dssp EEEEECGGGSCC
T ss_pred chhhhcccccCC
Confidence 999999887654
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Probab=99.69 E-value=6.1e-17 Score=140.94 Aligned_cols=61 Identities=15% Similarity=0.205 Sum_probs=50.5
Q ss_pred hhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhcccccc
Q 013862 167 NARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 167 ~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~ 236 (435)
.+.+..+++|+++++|++|.. ...+.+ .++++++++++|||++++|+|++|++.|.+ |++.
T Consensus 201 ~~~l~~~~~p~l~i~G~~D~~------~~~~~~-~~~~~~~~i~~~gH~~~~e~P~~~~~~i~~--fl~~ 261 (264)
T d1r3da_ 201 LPALQALKLPIHYVCGEQDSK------FQQLAE-SSGLSYSQVAQAGHNVHHEQPQAFAKIVQA--MIHS 261 (264)
T ss_dssp HHHHHTCSSCEEEEEETTCHH------HHHHHH-HHCSEEEEETTCCSCHHHHCHHHHHHHHHH--HHHH
T ss_pred hhhhhccCcceEEEEeCCcHH------HHHHHh-cCCCeEEEECCCCCchHHHCHHHHHHHHHH--HHHh
Confidence 356678899999999999953 333333 368999999999999999999999999999 8864
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.66 E-value=3.8e-16 Score=136.43 Aligned_cols=63 Identities=13% Similarity=0.056 Sum_probs=54.4
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCC-ceeEEEEecCCc
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPD-MDLVLILANPAT 71 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~-~v~~lVli~~~~ 71 (435)
||.|..+ ..++++++++|+.+++++++ ++++|+||||||.+|+.+|.++|+ +|+++|+++++.
T Consensus 42 ~g~S~~~--~~~~~~~~~~~l~~~l~~l~-----~~~~lvGhS~GG~ia~~~a~~~p~~~v~~lvl~~~~~ 105 (268)
T d1pjaa_ 42 GRESLRP--LWEQVQGFREAVVPIMAKAP-----QGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQ 105 (268)
T ss_dssp SGGGGSC--HHHHHHHHHHHHHHHHHHCT-----TCEEEEEETHHHHHHHHHHHHCTTCCEEEEEEESCCT
T ss_pred CCCCCCc--cccCHHHHHHHHHHHHhccC-----CeEEEEccccHHHHHHHHHHHCCccccceEEEECCCC
Confidence 4666543 35789999999999999885 389999999999999999999998 699999999764
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.64 E-value=2.3e-16 Score=145.66 Aligned_cols=65 Identities=20% Similarity=0.261 Sum_probs=56.8
Q ss_pred hcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCc-eEEEeCCCCcccc---ccCchhHHHHHhhcccccc
Q 013862 169 RLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNC-QTRRFGGGGHFLF---LEDGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 169 ~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~-~~~~i~~~gH~~~---~e~pe~~~~~I~~~~Fl~~ 236 (435)
.+.++++|+|+|+|++|.+++++ ..+.+.+.+|+. +.++++++||+.+ .+.++++...|.+ ||++
T Consensus 308 ~l~~i~vPvL~i~G~~D~~~~~~-~~~~l~~~lp~~~~~~~i~~~GH~d~~~~~~a~~~v~~~I~~--fl~~ 376 (377)
T d1k8qa_ 308 NLTDMHVPIAVWNGGNDLLADPH-DVDLLLSKLPNLIYHRKIPPYNHLDFIWAMDAPQAVYNEIVS--MMGT 376 (377)
T ss_dssp CGGGCCSCEEEEEETTCSSSCHH-HHHHHHTTCTTEEEEEEETTCCTTHHHHCTTHHHHTHHHHHH--HHHT
T ss_pred hHhhCCCCEEEEEeCCCCccCHH-HHHHHHHHCCCCeEEEEeCCCCCcchhhccchHHHHHHHHHH--HHhc
Confidence 57789999999999999999998 799999999986 7889999999733 4678999999998 8764
|
| >d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG species: Acremonium chrysogenum [TaxId: 5044]
Probab=99.64 E-value=4e-15 Score=134.82 Aligned_cols=212 Identities=13% Similarity=0.112 Sum_probs=129.3
Q ss_pred CCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc---------c
Q 013862 12 GHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI---------M 82 (435)
Q Consensus 12 ~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~---------~ 82 (435)
.+|+.|+++....++++|++. +-..|+|.||||++|+++|..||++|+++|.+++............ .
T Consensus 114 ~~ti~D~v~aq~~ll~~LGI~---~l~aViG~SmGGmqal~wa~~~Pd~v~~li~Ia~~~~~s~~~~a~~~~~~~ai~~D 190 (376)
T d2vata1 114 RTTIRDDVRIHRQVLDRLGVR---QIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCRQSGWCAAWFETQRQCIYDD 190 (376)
T ss_dssp CCCHHHHHHHHHHHHHHHTCC---CEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSBCCHHHHHHHHHHHHHHHHS
T ss_pred cchhHHHHHHHHHHHHHhCcc---eEEEeecccHHHHHHHHHHHhchHHHhhhcccccccccchHHHHHHHHHHHHhhcc
Confidence 369999999999999999994 3346889999999999999999999999999998864332111000 0
Q ss_pred ccc----c--ccccchhHHHHHHHHHhhcCChhHHHHHhhhhccc---hh--------------------------HHHH
Q 013862 83 PIP----A--ELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLF---LQ--------------------------STIQ 127 (435)
Q Consensus 83 ~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--------------------------~~~~ 127 (435)
+.| . ..-+..-....+............... .+..... .+ ...+
T Consensus 191 p~w~~G~Y~~~~~p~~GL~~Ar~~~~~ty~S~~~~~~-rf~~~~~~~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ve 269 (376)
T d2vata1 191 PKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDE-RFHMAPGVQAGRNISSQDAKKEINGTDSGNSHRAGQPIEAVS 269 (376)
T ss_dssp TTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHH-HSCCCCCCC---------------------------CGGGHH
T ss_pred ccccCCCccccchhHHHHHHHHHHHHHHhcCHHHHHH-HHhhccccccccccccchhhhcccccccccccccccchhHHH
Confidence 000 0 000000111111222222112111111 0000000 00 0011
Q ss_pred HhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhh------hhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhC
Q 013862 128 ERSQDFVAMSSYLPVLANILPKETLLWKLELLKSAS------AYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRAL 201 (435)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~ 201 (435)
.+.... .+.+...+....+....+.+...+ .+..+.+..|++|+|+|.++.|.++|++ ..+++++.+
T Consensus 270 syL~~~------g~k~~~rfDansyl~l~~a~d~~Di~~~~~g~l~~aL~~I~a~~LvI~~~sD~lFPp~-~~~e~a~~l 342 (376)
T d2vata1 270 SYLRYQ------AQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGLYSFD-EHVEMGRSI 342 (376)
T ss_dssp HHHHHH------HHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSSSCHH-HHHHHHHHS
T ss_pred HHHHHH------HhhhhcccccccHHHHHHHHHhcccccccCCCHHHHHhhCCCCEEEEEeCcccCcCHH-HHHHHHHhc
Confidence 111100 112233334444433333333211 2345568999999999999999999999 799999999
Q ss_pred CCceEEEeC-CCCccccccCchhHHHHHhhcccccc
Q 013862 202 PNCQTRRFG-GGGHFLFLEDGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 202 ~~~~~~~i~-~~gH~~~~e~pe~~~~~I~~~~Fl~~ 236 (435)
+++++++|+ ..||..++.+++.+.+.|++ ||++
T Consensus 343 ~~a~~~~I~S~~GHDaFL~e~~~~~~~I~~--FL~q 376 (376)
T d2vata1 343 PNSRLCVVDTNEGHDFFVMEADKVNDAVRG--FLDQ 376 (376)
T ss_dssp TTEEEEECCCSCGGGHHHHTHHHHHHHHHH--HHTC
T ss_pred CCCeEEEECCCCCccccccCHHHHHHHHHH--HHcC
Confidence 999999998 67998888889999999999 9864
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.61 E-value=9.5e-15 Score=124.92 Aligned_cols=67 Identities=18% Similarity=0.388 Sum_probs=59.4
Q ss_pred hhhcccccceEEEEeeCCCCCCCChhHHHHHHhhC--CCceEEEeCCCCcccccc-CchhHHHHHhhcccccc
Q 013862 167 NARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRAL--PNCQTRRFGGGGHFLFLE-DGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 167 ~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e-~pe~~~~~I~~~~Fl~~ 236 (435)
...+..+++|+|+++|++|..++++ ..+.+.+.+ +++++++++++||+++.| +|+++.+.|.+ |+++
T Consensus 170 ~~~~~~~~~p~lii~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~--Fl~~ 239 (242)
T d1tqha_ 170 RDHLDLIYAPTFVVQARHDEMINPD-SANIIYNEIESPVKQIKWYEQSGHVITLDQEKDQLHEDIYA--FLES 239 (242)
T ss_dssp HHTGGGCCSCEEEEEETTCSSSCTT-HHHHHHHHCCCSSEEEEEETTCCSSGGGSTTHHHHHHHHHH--HHHH
T ss_pred ccccceeccccceeecccCCccCHH-HHHHHHHHcCCCCcEEEEECCCCCcCccccCHHHHHHHHHH--HHHh
Confidence 4567889999999999999999999 789998887 567999999999999987 58999999999 8864
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Probab=99.61 E-value=9.1e-16 Score=142.80 Aligned_cols=67 Identities=7% Similarity=-0.029 Sum_probs=60.2
Q ss_pred CccccccC-CCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcc
Q 013862 2 YGACIFQL-QIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATS 72 (435)
Q Consensus 2 yG~s~~p~-~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~ 72 (435)
||.|..|. ...|+..++++|+..+++.++. ++++++|||+||.++..++..+|+++.++++++....
T Consensus 150 ~G~S~~P~~~~~y~~~~~a~~~~~l~~~lg~----~~~~~vg~~~Gg~v~~~~a~~~p~~~~~~~l~~~~~~ 217 (394)
T d1qo7a_ 150 YTFSSGPPLDKDFGLMDNARVVDQLMKDLGF----GSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNLCAMR 217 (394)
T ss_dssp STTSCCCCSSSCCCHHHHHHHHHHHHHHTTC----TTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCCC
T ss_pred cCCCCCCCCCCccCHHHHHHHHHHHHhhccC----cceEEEEecCchhHHHHHHHHhhccccceeEeeeccc
Confidence 89999875 4579999999999999999988 4889999999999999999999999999999876643
|
| >d2pl5a1 c.69.1.40 (A:5-366) Homoserine O-acetyltransferase {Leptospira interrogans [TaxId: 173]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Leptospira interrogans [TaxId: 173]
Probab=99.58 E-value=4.6e-15 Score=133.72 Aligned_cols=213 Identities=15% Similarity=0.148 Sum_probs=121.7
Q ss_pred CChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccc---------cc
Q 013862 13 HHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTI---------MP 83 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~---------~~ 83 (435)
.|+.|++.....++++|++. +-..++|.||||++|+++|.+||++|+++|.+++............ .+
T Consensus 121 ~t~~D~v~~~~~ll~~LGI~---~l~~viG~SmGGmqAl~wA~~yPd~v~~~v~ia~sa~~s~~~~~~~~~~~~aI~~Dp 197 (362)
T d2pl5a1 121 VSIQDMVKAQKLLVESLGIE---KLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMASTAEHSAMQIAFNEVGRQAILSDP 197 (362)
T ss_dssp CCHHHHHHHHHHHHHHTTCS---SEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSBCCHHHHHHHHHHHHHHHTST
T ss_pred chhHHHHHHHHHHHHHhCcC---eeEEEeehhHHHHHHHHHHHhCchHhhhhcccccccccCHHHHHHHHHHHHHHhcCC
Confidence 68999999999999999994 3445889999999999999999999999999998764322111000 00
Q ss_pred ccccc-c-cchhHHHH---HHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchh----HHhccCCchhhhh
Q 013862 84 IPAEL-M-SGQMTLTL---SYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLP----VLANILPKETLLW 154 (435)
Q Consensus 84 ~~~~~-~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 154 (435)
.|... . .......+ +.+............ ..+.......+. .........+.. .+...+....+..
T Consensus 198 ~~~~G~Y~~~~P~~GL~~AR~~~~~~y~s~~~~~-~~f~~~~~~~~~----~~~~~~ve~yl~~~g~k~~~rfDan~yl~ 272 (362)
T d2pl5a1 198 NWKNGLYDENSPRKGLALARMVGHITYLSDDKMR-EKFGRNPPRGNI----LSTDFAVGSYLIYQGESFVDRFDANSYIY 272 (362)
T ss_dssp TCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHH-HHHTTSCCSSCT----TTTTTTSCGGGGSTTCCSSSCCCHHHHHH
T ss_pred ccccCCcccCChhHHHHHHHHHHHHHHcCchhhh-hhhccccccccc----cchhHHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 00000 0 00000111 111111111111000 000000000000 000000000110 1111222233333
Q ss_pred HHhhhhhh----hhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCc----eEEEeC-CCCccccccCchhHH
Q 013862 155 KLELLKSA----SAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNC----QTRRFG-GGGHFLFLEDGVDLV 225 (435)
Q Consensus 155 ~~~~~~~~----~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~----~~~~i~-~~gH~~~~e~pe~~~ 225 (435)
..+.+... .....+.+.+|++|+|+|..+.|.++|++ ..+.+++.+|++ ++++|+ ..||..++.+++++.
T Consensus 273 l~~a~~~~Di~~~~~l~~aL~~I~AkvLvi~~~sD~lFpp~-~~~~~a~~l~~a~~~v~~~eI~S~~GHdaFL~e~~~~~ 351 (362)
T d2pl5a1 273 VTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPA-QSREIVKSLEAADKRVFYVELQSGEGHDSFLLKNPKQI 351 (362)
T ss_dssp HHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHH-HHHHHHHHHHHTTCCEEEEEECCCBSSGGGGSCCHHHH
T ss_pred HHhhhhcccccccccHHHHHhhCCCCEEEEEeCcccCcCHH-HHHHHHHHHHhCCCCeEEEEeCCCCCcchhccCHHHHH
Confidence 32222221 12345678999999999999999999999 688888887654 677776 579999999999999
Q ss_pred HHHhhcccccc
Q 013862 226 TTIKGAGYYRR 236 (435)
Q Consensus 226 ~~I~~~~Fl~~ 236 (435)
+.|++ ||++
T Consensus 352 ~~I~~--FL~~ 360 (362)
T d2pl5a1 352 EILKG--FLEN 360 (362)
T ss_dssp HHHHH--HHHC
T ss_pred HHHHH--HHcC
Confidence 99999 9863
|
| >d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Haemophilus influenzae [TaxId: 727]
Probab=99.57 E-value=2.8e-14 Score=128.34 Aligned_cols=211 Identities=16% Similarity=0.082 Sum_probs=125.1
Q ss_pred CCChHHHHHHHHHHHHHhhhcCCCCCE-EEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccccccc-------c--
Q 013862 12 GHHFTGLLKLIERTIRSENCRSSNRPV-YLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQT-------I-- 81 (435)
Q Consensus 12 ~~s~~~~a~dl~~~l~~l~~~~~~~~~-~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~-------~-- 81 (435)
.+|+.|+++....++++|++. ++ .++|.||||++|+++|.+||++|+++|.+++........... +
T Consensus 113 ~iti~D~v~aq~~Ll~~LGI~----~l~~viG~SmGGmqAl~wa~~~Pd~v~~~i~i~~~a~~s~~~~~~~~~~~~aI~~ 188 (357)
T d2b61a1 113 NIVVQDIVKVQKALLEHLGIS----HLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFSAEAIGFNHVMRQAVIN 188 (357)
T ss_dssp CCCHHHHHHHHHHHHHHTTCC----CEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSSCCHHHHHHHHHHHHHHHT
T ss_pred cchhHHHHHHHHHHHHHhCcc----eEEEEecccHHHHHHHHHHHhhhHHHhhhcccccccccchhHHHHHHHHHHHHHc
Confidence 379999999999999999994 55 677999999999999999999999999999875332211100 0
Q ss_pred cccc-----ccccc-chhHHHHHHHHHhhcCChhHHHHHhhhhccch-------hHHHHHhHHhHHhhhcchhHHhccCC
Q 013862 82 MPIP-----AELMS-GQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFL-------QSTIQERSQDFVAMSSYLPVLANILP 148 (435)
Q Consensus 82 ~~~~-----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (435)
.+.| ..... .......+.+............. .+.+.... ....+.+.+... +.+...+.
T Consensus 189 Dp~~~~G~Y~~~~~p~~GL~~Ar~~a~~ty~s~~~~~~-~f~r~~~~~~~~~~~~~~vesyL~~~g------~kf~~rfD 261 (357)
T d2b61a1 189 DPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAK-AFGRATKSDGSFWGDYFQVESYLSYQG------KKFLERFD 261 (357)
T ss_dssp STTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHH-HTTTCBCTTCCTTSCCBHHHHHHHHHH------HHHHTTCC
T ss_pred CCCCCCCCcccCCCchhHHHHHHHHHHhhccCHHHHHH-HhccccccccccccchhhHHHHHHHHH------HHHHhhCC
Confidence 0000 00000 01111111111111122211111 11100000 000111111111 12223334
Q ss_pred chhhhhHHhhhhh-----hhhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCC----CceEEEeCC-CCccccc
Q 013862 149 KETLLWKLELLKS-----ASAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALP----NCQTRRFGG-GGHFLFL 218 (435)
Q Consensus 149 ~~~~~~~~~~~~~-----~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~----~~~~~~i~~-~gH~~~~ 218 (435)
...+....+.+.. ......+.+++|++|+|+|..+.|.+.|++ ..+..++.++ ++++++++. .||..++
T Consensus 262 an~yl~l~~a~~~~D~~~~~~~l~~aL~~I~a~vLvi~~~sD~lFpp~-~~~~~a~~l~~~~~~v~~~~I~S~~GHdafL 340 (357)
T d2b61a1 262 ANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPI-DLYKSKQLLEQSGVDLHFYEFPSDYGHDAFL 340 (357)
T ss_dssp HHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHH-HHHHHHHHHHHTTCEEEEEEECCTTGGGHHH
T ss_pred HHHHHHHHHHhhhcccccccccHHHHHhhcCCCEEEEEeCCccccCHH-HHHHHHHHHHhcCCCeEEEEECCCCCccccC
Confidence 4444333333322 123445678999999999999999999998 5777777664 458888884 4999988
Q ss_pred cCchhHHHHHhhcccccc
Q 013862 219 EDGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 219 e~pe~~~~~I~~~~Fl~~ 236 (435)
-+.+++.+.|++ ||..
T Consensus 341 ~e~~~~~~~I~~--fL~~ 356 (357)
T d2b61a1 341 VDYDQFEKRIRD--GLAG 356 (357)
T ss_dssp HCHHHHHHHHHH--HHHT
T ss_pred cCHHHHHHHHHH--HHcc
Confidence 889999999999 8864
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Probab=99.52 E-value=1e-14 Score=124.76 Aligned_cols=65 Identities=20% Similarity=0.102 Sum_probs=52.1
Q ss_pred hhcccccceEEEEeeCCCCCCCChhHHHHHHhhC-CCceEEEeCCCCccccccCc--hhHHHHHhhccccccc
Q 013862 168 ARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRAL-PNCQTRRFGGGGHFLFLEDG--VDLVTTIKGAGYYRRG 237 (435)
Q Consensus 168 ~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p--e~~~~~I~~~~Fl~~~ 237 (435)
.....+++|+++++|++|..++.. ...+.+.. ++.++++++ +||+.++++| +++++.|.+ ||+++
T Consensus 162 ~~~~~i~~p~l~i~g~~D~~~~~~--~~~w~~~~~~~~~~~~i~-g~H~~ml~~~~~~~va~~I~~--~L~~~ 229 (230)
T d1jmkc_ 162 ISTGQVKADIDLLTSGADFDIPEW--LASWEEATTGAYRMKRGF-GTHAEMLQGETLDRNAGILLE--FLNTQ 229 (230)
T ss_dssp CCCSCBSSEEEEEECSSCCCCCTT--EECSGGGBSSCEEEEECS-SCGGGTTSHHHHHHHHHHHHH--HHTCB
T ss_pred cccccccCcceeeeecCCcccchh--HHHHHHhccCCcEEEEEc-CCChhhcCCccHHHHHHHHHH--HHhhc
Confidence 455678999999999999999876 33344444 467888898 5999999877 899999999 88764
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Probab=99.50 E-value=2.1e-13 Score=121.54 Aligned_cols=196 Identities=17% Similarity=0.137 Sum_probs=111.4
Q ss_pred CCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccc
Q 013862 10 QIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELM 89 (435)
Q Consensus 10 ~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~ 89 (435)
...+++.++.+|+.++++.+.... .++++|+||||||.+++.+|.. ..++++|+++|.......
T Consensus 78 ~~~~~~~~~~~dl~~vi~~l~~~~-~~~i~lvG~SmGG~ial~~A~~--~~v~~li~~~g~~~~~~~------------- 141 (302)
T d1thta_ 78 IDEFTMTTGKNSLCTVYHWLQTKG-TQNIGLIAASLSARVAYEVISD--LELSFLITAVGVVNLRDT------------- 141 (302)
T ss_dssp --CCCHHHHHHHHHHHHHHHHHTT-CCCEEEEEETHHHHHHHHHTTT--SCCSEEEEESCCSCHHHH-------------
T ss_pred ccCCCHHHHHHHHHHHHHhhhccC-CceeEEEEEchHHHHHHHHhcc--cccceeEeecccccHHHH-------------
Confidence 456889999999999999997643 3589999999999999998864 458899998877432110
Q ss_pred cchhHHHHHHHHHhhcCChhHHHHHhhhhccch---hHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhh
Q 013862 90 SGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFL---QSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYA 166 (435)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (435)
........ ............... ......+...... . ... .....
T Consensus 142 -------~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~-~~~-----------~~~~~ 189 (302)
T d1thta_ 142 -------LEKALGFD---YLSLPIDELPNDLDFEGHKLGSEVFVRDCFE----------H-HWD-----------TLDST 189 (302)
T ss_dssp -------HHHHHSSC---GGGSCGGGCCSEEEETTEEEEHHHHHHHHHH----------T-TCS-----------SHHHH
T ss_pred -------HHHHHhhc---cchhhhhhccccccccccchhhHHHHHHHHH----------h-HHH-----------HHHHH
Confidence 00000000 000000000000000 0000000000000 0 000 00112
Q ss_pred hhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCC--CceEEEeCCCCccccccCchhHH---HHHhhccccccccccc
Q 013862 167 NARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALP--NCQTRRFGGGGHFLFLEDGVDLV---TTIKGAGYYRRGRIVD 241 (435)
Q Consensus 167 ~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~pe~~~---~~I~~~~Fl~~~~~~~ 241 (435)
.+.+.++++|+|+++|++|.+++++ .++++.+.++ ++++++++|+||.+. |+++.+. +.+.++..-......+
T Consensus 190 ~~~~~~i~~PvLii~G~~D~~V~~~-~~~~l~~~i~s~~~kl~~~~g~~H~l~-e~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (302)
T d1thta_ 190 LDKVANTSVPLIAFTANNDDWVKQE-EVYDMLAHIRTGHCKLYSLLGSSHDLG-ENLVVLRNFYQSVTKAAIAMDGGSLE 267 (302)
T ss_dssp HHHHTTCCSCEEEEEETTCTTSCHH-HHHHHHTTCTTCCEEEEEETTCCSCTT-SSHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHhhcCCCEEEEEeCCCCccCHH-HHHHHHHhCCCCCceEEEecCCCcccc-cChHHHHHHHHHHHHHHhhhcccccc
Confidence 3567789999999999999999999 7999999875 579999999999874 5565433 3333321111222334
Q ss_pred cccccCCCChHHHH
Q 013862 242 YVSDFIPPTTIEVN 255 (435)
Q Consensus 242 ~~~~~~~p~~~~~~ 255 (435)
...++..|..++.+
T Consensus 268 ~~~~~~~p~~~~~~ 281 (302)
T d1thta_ 268 IDVDFIEPDFEQLT 281 (302)
T ss_dssp CCCCCCCCCHHHHH
T ss_pred cccccCCccHHhhh
Confidence 44455667655444
|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Picromycin polyketide synthase species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.50 E-value=8.4e-14 Score=122.97 Aligned_cols=162 Identities=17% Similarity=0.116 Sum_probs=101.7
Q ss_pred CChHHHHHHHHHHH-HHhhhcCCCCCEEEEEeChhHHHHHHHHHhC----CCceeEEEEecCCccccccccccccccccc
Q 013862 13 HHFTGLLKLIERTI-RSENCRSSNRPVYLVGESLGACLALAVAARN----PDMDLVLILANPATSFRKSLLQTIMPIPAE 87 (435)
Q Consensus 13 ~s~~~~a~dl~~~l-~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~----p~~v~~lVli~~~~~~~~~~~~~~~~~~~~ 87 (435)
.|++++++++.+.+ +..+. ++++|+||||||.+|+.+|.+. ++.|+++|++++......... .
T Consensus 112 ~s~~~~a~~~~~~i~~~~~~----~P~vL~GhS~GG~vA~e~A~~l~~~~g~~v~~LvL~d~~~~~~~~~~--------~ 179 (283)
T d2h7xa1 112 ADLDTALDAQARAILRAAGD----APVVLLGHSGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEPI--------E 179 (283)
T ss_dssp SSHHHHHHHHHHHHHHHHTT----SCEEEEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTCCHHH--------H
T ss_pred CCHHHHHHHHHHHHHHhcCC----CceEEEEeccchHHHHHHHHhhHHHcCCCceEEEEecCCccccccch--------h
Confidence 58999999877644 44444 6999999999999999999864 568999999998753221110 0
Q ss_pred cccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhh
Q 013862 88 LMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYAN 167 (435)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (435)
.. ............. ........... .+..+. ...
T Consensus 180 ~~---~~~~~~~~~~~~~-------------~~~~~~~l~a~-----------------------~~~~~~------~~~ 214 (283)
T d2h7xa1 180 VW---SRQLGEGLFAGEL-------------EPMSDARLLAM-----------------------GRYARF------LAG 214 (283)
T ss_dssp HT---HHHHHHHHHHTCS-------------SCCCHHHHHHH-----------------------HHHHHH------HHS
T ss_pred hh---hhhhHHHhhcccc-------------cccccHHHHHH-----------------------HHHHHH------Hhh
Confidence 00 0000000000000 00000000000 000000 112
Q ss_pred hhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCC-ceEEEeCCCCcccc-ccCchhHHHHHhhccccc
Q 013862 168 ARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPN-CQTRRFGGGGHFLF-LEDGVDLVTTIKGAGYYR 235 (435)
Q Consensus 168 ~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~-~e~pe~~~~~I~~~~Fl~ 235 (435)
.....+++|+++++|++|..++.. ....+.+..++ .+++.+++ ||+.+ .|+++.+++.|.+ ||.
T Consensus 215 ~~~~~~~~Pvl~i~g~~d~~~~~~-~~~~w~~~~~~~~~~~~v~G-~H~~ml~e~~~~vA~~i~~--~L~ 280 (283)
T d2h7xa1 215 PRPGRSSAPVLLVRASEPLGDWQE-ERGDWRAHWDLPHTVADVPG-DHFTMMRDHAPAVAEAVLS--WLD 280 (283)
T ss_dssp CCCCCCCSCEEEEEESSCSSCCCG-GGCCCSCCCSSCSEEEEESS-CTTHHHHTTHHHHHHHHHH--HHH
T ss_pred ccccccCCCeEEEEeCCCCCCCHH-HHHHHHHhCCCCcEEEEEcC-CCcccccCCHHHHHHHHHH--HHH
Confidence 334678999999999999999988 57777777765 58999995 89865 4689999999999 764
|
| >d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: YdeN-like domain: Hypothetical protein YdeN species: Bacillus subtilis [TaxId: 1423]
Probab=99.47 E-value=2.7e-13 Score=111.82 Aligned_cols=60 Identities=20% Similarity=0.322 Sum_probs=49.7
Q ss_pred cccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccC---chhHHHHHhhccccc
Q 013862 172 AVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLED---GVDLVTTIKGAGYYR 235 (435)
Q Consensus 172 ~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~---pe~~~~~I~~~~Fl~ 235 (435)
++++|+++++|++|.++|.+ ..+.+++.. ++++++++++||+...+. -.++.+.|.+ |+.
T Consensus 123 ~~~~p~lvi~g~~D~~vp~~-~~~~l~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~~~~l~~--~~~ 185 (186)
T d1uxoa_ 123 ESAKHRAVIASKDDQIVPFS-FSKDLAQQI-DAALYEVQHGGHFLEDEGFTSLPIVYDVLTS--YFS 185 (186)
T ss_dssp HHEEEEEEEEETTCSSSCHH-HHHHHHHHT-TCEEEEETTCTTSCGGGTCSCCHHHHHHHHH--HHH
T ss_pred cCCCCEEEEecCCCCCCCHH-HHHHHHHHc-CCEEEEeCCCCCcCccccCcccHHHHHHHHH--HHc
Confidence 35789999999999999999 789999888 689999999999876552 2467788888 764
|
| >d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: XC6422 protein species: Xanthomonas campestris [TaxId: 339]
Probab=99.45 E-value=5.5e-13 Score=111.83 Aligned_cols=126 Identities=21% Similarity=0.183 Sum_probs=97.0
Q ss_pred ChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccccchh
Q 013862 14 HFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQM 93 (435)
Q Consensus 14 s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (435)
+.+...+|+.++++.+....+.++++++||||||.+++.+|.+. .++++|+++|+... ..
T Consensus 87 ~~~~~~~D~~a~~~~~~~~~~~~~v~l~G~S~Gg~va~~~a~~~--~~~~lil~ap~~~~------------~~------ 146 (218)
T d2fuka1 87 HGDGEQDDLRAVAEWVRAQRPTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGR------------WD------ 146 (218)
T ss_dssp TTTHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTT------------BC------
T ss_pred cCcchHHHHHHHHHHHhhcccCceEEEEEEcccchhhhhhhccc--ccceEEEeCCcccc------------hh------
Confidence 45677889999999888777778999999999999999998875 47799998876210 00
Q ss_pred HHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhcccc
Q 013862 94 TLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARLDAV 173 (435)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 173 (435)
.....+
T Consensus 147 --------------------------------------------------------------------------~~~~~~ 152 (218)
T d2fuka1 147 --------------------------------------------------------------------------FSDVQP 152 (218)
T ss_dssp --------------------------------------------------------------------------CTTCCC
T ss_pred --------------------------------------------------------------------------hhcccc
Confidence 000123
Q ss_pred cceEEEEeeCCCCCCCChhHHHHHHhhCC-CceEEEeCCCCccccccCchhHHHHHhhccccccc
Q 013862 174 KAQTLILCSGRDQLLPSEEEGDRLCRALP-NCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRRG 237 (435)
Q Consensus 174 ~~Pvlii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~~ 237 (435)
.+|+|+|+|++|.++|.+ ..+++.+.++ ..++++++|++|+.. .+.+++.+.+.+ |+++.
T Consensus 153 ~~P~Lvi~G~~D~~vp~~-~~~~l~~~~~~~~~l~~i~ga~H~f~-~~~~~l~~~~~~--~v~~~ 213 (218)
T d2fuka1 153 PAQWLVIQGDADEIVDPQ-AVYDWLETLEQQPTLVRMPDTSHFFH-RKLIDLRGALQH--GVRRW 213 (218)
T ss_dssp CSSEEEEEETTCSSSCHH-HHHHHHTTCSSCCEEEEETTCCTTCT-TCHHHHHHHHHH--HHGGG
T ss_pred ccceeeEecCCCcCcCHH-HHHHHHHHccCCceEEEeCCCCCCCC-CCHHHHHHHHHH--HHHHh
Confidence 579999999999999999 6888877665 468999999999754 455678888888 76643
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.44 E-value=1.4e-13 Score=120.88 Aligned_cols=56 Identities=20% Similarity=0.200 Sum_probs=41.1
Q ss_pred CCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCC
Q 013862 12 GHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPA 70 (435)
Q Consensus 12 ~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~ 70 (435)
..++++++++..+.+..+.. .++++|+||||||.+|+.+|.++|+++.++++++..
T Consensus 63 ~~~~~~~a~~~~~~~~~~~~---~~~~~lvGhS~Gg~vA~~~A~~~p~~~~~v~~l~~~ 118 (286)
T d1xkta_ 63 LDSIHSLAAYYIDCIRQVQP---EGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSL 118 (286)
T ss_dssp CSCHHHHHHHHHHHHHHHCC---SSCCEEEEETHHHHHHHHHHHHHHHC------CCEE
T ss_pred CCCHHHHHHHHHHHHHHhcC---CCceEEeecCCccHHHHHHHHHHHHcCCCceeEEEe
Confidence 46789999888766665533 369999999999999999999999999998877654
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=99.34 E-value=1.4e-11 Score=112.22 Aligned_cols=167 Identities=16% Similarity=0.113 Sum_probs=99.9
Q ss_pred ccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcccccccccccc
Q 013862 3 GACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIM 82 (435)
Q Consensus 3 G~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~ 82 (435)
|.|........+++..+..+.+++...... ..+++.|+||||||.+|+.+|..+| +++++|.+++.......
T Consensus 170 G~s~~~~~~~~~~~~~~~~v~d~l~~~~~v-d~~rI~l~G~S~GG~~Al~~A~~~p-ri~a~V~~~~~~~~~~~------ 241 (360)
T d2jbwa1 170 GEMFEYKRIAGDYEKYTSAVVDLLTKLEAI-RNDAIGVLGRSLGGNYALKSAACEP-RLAACISWGGFSDLDYW------ 241 (360)
T ss_dssp GGGTTTCCSCSCHHHHHHHHHHHHHHCTTE-EEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCSCSTTG------
T ss_pred cccCccccccccHHHHHHHHHHHHHhcccc-cccceeehhhhcccHHHHHHhhcCC-CcceEEEEcccccHHHH------
Confidence 444333333455666677776666655321 1247999999999999999999887 68999988876432110
Q ss_pred ccccccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhh
Q 013862 83 PIPAELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSA 162 (435)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (435)
....... ........... ...+. ..... .
T Consensus 242 ----~~~~~~~----~~~~~~~~~~~------------~~~~~----~~~~~---------------------------~ 270 (360)
T d2jbwa1 242 ----DLETPLT----KESWKYVSKVD------------TLEEA----RLHVH---------------------------A 270 (360)
T ss_dssp ----GGSCHHH----HHHHHHHTTCS------------SHHHH----HHHHH---------------------------H
T ss_pred ----hhhhhhh----hHHHHHhccCC------------chHHH----HHHHH---------------------------h
Confidence 0000000 00000000000 00000 00000 0
Q ss_pred hhhhhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCC--ceEEEeCCCCccccccCchhHHHHHhhc
Q 013862 163 SAYANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPN--CQTRRFGGGGHFLFLEDGVDLVTTIKGA 231 (435)
Q Consensus 163 ~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~pe~~~~~I~~~ 231 (435)
.......+.+++||+|+++|++|. +|.. ..+.+.+.+++ .+++++++++|.. .+++.+....|.+|
T Consensus 271 ~~~~~~~~~~i~~P~Lii~G~~D~-vp~~-~~~~l~~~~~~~~~~l~~~~~g~H~~-~~~~~~~~~~i~dW 338 (360)
T d2jbwa1 271 ALETRDVLSQIACPTYILHGVHDE-VPLS-FVDTVLELVPAEHLNLVVEKDGDHCC-HNLGIRPRLEMADW 338 (360)
T ss_dssp HTCCTTTGGGCCSCEEEEEETTSS-SCTH-HHHHHHHHSCGGGEEEEEETTCCGGG-GGGTTHHHHHHHHH
T ss_pred hcchhhhHhhCCCCEEEEEeCCCC-cCHH-HHHHHHHhcCCCCeEEEEECCCCcCC-CcChHHHHHHHHHH
Confidence 001134567899999999999998 5887 68999988874 4677889999964 46677777777774
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Probab=99.33 E-value=7e-12 Score=102.36 Aligned_cols=124 Identities=15% Similarity=0.169 Sum_probs=90.6
Q ss_pred ChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhC--CCceeEEEEecCCccccccccccccccccccccc
Q 013862 14 HFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARN--PDMDLVLILANPATSFRKSLLQTIMPIPAELMSG 91 (435)
Q Consensus 14 s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~--p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~ 91 (435)
+.+++++++.+++++++. ++++|+||||||.++..++.++ |++|+++|+++++..... ...+
T Consensus 50 ~~~~l~~~i~~~~~~~~~----~~v~lvGHSmGG~va~~~~~~~~~~~~V~~~V~l~~p~~g~~----------~~~l-- 113 (179)
T d1ispa_ 50 NGPVLSRFVQKVLDETGA----KKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTT----------GKAL-- 113 (179)
T ss_dssp HHHHHHHHHHHHHHHHCC----SCEEEEEETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTC----------SBCC--
T ss_pred hhhhHHHHHHHHHHhcCC----ceEEEEeecCcCHHHHHHHHHcCCchhhCEEEEECCCCCCch----------hhhc--
Confidence 455566666666666655 5899999999999999999887 678999999987632100 0000
Q ss_pred hhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhcc
Q 013862 92 QMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARLD 171 (435)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 171 (435)
. ....
T Consensus 114 --------------------------------------------------------~-------------------~~~~ 118 (179)
T d1ispa_ 114 --------------------------------------------------------P-------------------GTDP 118 (179)
T ss_dssp --------------------------------------------------------C-------------------CSCT
T ss_pred --------------------------------------------------------C-------------------Cccc
Confidence 0 0011
Q ss_pred cccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCccccccCchhHHHHHhhccccccc
Q 013862 172 AVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRRG 237 (435)
Q Consensus 172 ~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~~ 237 (435)
...+|++.++|+.|.++++. . ..+++++.+.++++||.....+| ++.+.|.+ ||+..
T Consensus 119 ~~~~~~~~i~~~~D~~v~~~-~-----~~l~~~~~~~~~~~~H~~l~~~~-~v~~~i~~--~L~~~ 175 (179)
T d1ispa_ 119 NQKILYTSIYSSADMIVMNY-L-----SRLDGARNVQIHGVGHIGLLYSS-QVNSLIKE--GLNGG 175 (179)
T ss_dssp TCCCEEEEEEETTCSSSCHH-H-----HCCBTSEEEEESSCCTGGGGGCH-HHHHHHHH--HHTTT
T ss_pred ccCceEEEEEecCCcccCch-h-----hcCCCceEEEECCCCchhhccCH-HHHHHHHH--HHhcc
Confidence 23579999999999999876 2 25788899999999999888888 57888888 77644
|
| >d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acylamino-acid-releasing enzyme, C-terminal donain domain: Acylamino-acid-releasing enzyme, C-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=99.18 E-value=1.5e-10 Score=100.51 Aligned_cols=155 Identities=15% Similarity=0.208 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccccchhHHH
Q 013862 17 GLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTLT 96 (435)
Q Consensus 17 ~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (435)
...+|+.+.++.+......+++.++|+|+||..++.++..+|+.+++++..++....... ...... .
T Consensus 97 ~~~~D~~~~~~~l~~~~~~~~~~i~g~s~gg~~~~~~~~~~~~~~~a~i~~~~~~~~~~~---------~~~~~~----~ 163 (260)
T d2hu7a2 97 GELEDVSAAARWARESGLASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEEM---------YELSDA----A 163 (260)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEEEEETHHHHHHHHHHHHSTTSSSEEEEESCCCCHHHH---------HHTCCH----H
T ss_pred hhhhhhcccccccccccccceeeccccccccccccchhccCCcccccccccccchhhhhh---------hccccc----c
Confidence 345677777776655444468999999999999999999999999999988877432110 000000 0
Q ss_pred HHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhcccccce
Q 013862 97 LSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARLDAVKAQ 176 (435)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 176 (435)
.... ...... ...+.+.. ......+.++++|
T Consensus 164 ~~~~-----------------------------~~~~~~--~~~~~~~~------------------~~~~~~~~~~~~P 194 (260)
T d2hu7a2 164 FRNF-----------------------------IEQLTG--GSREIMRS------------------RSPINHVDRIKEP 194 (260)
T ss_dssp HHHH-----------------------------HHHHHC--SCHHHHHH------------------TCGGGCGGGCCSC
T ss_pred cccc-----------------------------cccccc--cccccccc------------------cchhhcccccCCC
Confidence 0000 000000 00000000 0112345678899
Q ss_pred EEEEeeCCCCCCCChhHHHHHHhhC----CCceEEEeCCCCccccc-cCchhHHHHHhhcccccc
Q 013862 177 TLILCSGRDQLLPSEEEGDRLCRAL----PNCQTRRFGGGGHFLFL-EDGVDLVTTIKGAGYYRR 236 (435)
Q Consensus 177 vlii~G~~D~~~~~~~~~~~~~~~~----~~~~~~~i~~~gH~~~~-e~pe~~~~~I~~~~Fl~~ 236 (435)
+|+++|++|..+|.. .+..+.+.+ ..+++++++|+||.+.. |+.+++.+.+.+ ||.+
T Consensus 195 ~liihG~~D~~vp~~-~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~e~~~~~~~~~~~--fl~~ 256 (260)
T d2hu7a2 195 LALIHPQNDSRTPLK-PLLRLMGELLARGKTFEAHIIPDAGHAINTMEDAVKILLPAVF--FLAT 256 (260)
T ss_dssp EEEEEETTCSSSCSH-HHHHHHHHHHHTTCCEEEEEETTCCSSCCBHHHHHHHHHHHHH--HHHH
T ss_pred ceeeecccCceecHH-HHHHHHHHHHHCCCCeEEEEECcCCCCCCChHhHHHHHHHHHH--HHHH
Confidence 999999999999998 677776543 45689999999997643 555666666666 7654
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.14 E-value=8.2e-11 Score=101.67 Aligned_cols=160 Identities=16% Similarity=0.141 Sum_probs=93.3
Q ss_pred CChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhC---CCceeEEEEecCCccccccccccccccccccc
Q 013862 13 HHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARN---PDMDLVLILANPATSFRKSLLQTIMPIPAELM 89 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~---p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~ 89 (435)
.|++++++++.+.|..... +.+++|+||||||.+|+++|.+. .+.|.++|++++..+.....
T Consensus 89 ~s~~~~a~~~~~~i~~~~~---~~P~~L~GhS~Gg~vA~e~A~~l~~~g~~v~~lvlld~~~p~~~~~------------ 153 (255)
T d1mo2a_ 89 SSMAAVAAVQADAVIRTQG---DKPFVVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDA------------ 153 (255)
T ss_dssp SSHHHHHHHHHHHHHHTTS---SSCEEEEECSTTHHHHHHHHHHHHHHTCCCSEEEEEECSCSSHHHH------------
T ss_pred CCHHHHHHHHHHHHHHhCC---CCCEEEEEeCCcHHHHHHHHHhhHhcCCCccEEEEECCCCCCCccc------------
Confidence 5899999998877755432 36999999999999999999875 45699999999764321110
Q ss_pred cchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhh
Q 013862 90 SGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANAR 169 (435)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (435)
................ ............ ....+.+ ....
T Consensus 154 ---~~~~~~~~~~~~~~~~---------~~~~~~~~l~a~-----------------------~~~~~~~------~~~~ 192 (255)
T d1mo2a_ 154 ---MNAWLEELTATLFDRE---------TVRMDDTRLTAL-----------------------GAYDRLT------GQWR 192 (255)
T ss_dssp ---HHHHHHHHHTTCC-------------CCCCHHHHHHH-----------------------HHHHHHH------HHCC
T ss_pred ---hhhHHHHHHHHhhccc---------cccCCHHHHHHH-----------------------HHHHHHH------hcCC
Confidence 0001111110000000 000000000000 0000000 0112
Q ss_pred cccccceEEEEeeCCCCCCCChhHHHHHHhhCC-CceEEEeCCCCcccc-ccCchhHHHHHhhcccc
Q 013862 170 LDAVKAQTLILCSGRDQLLPSEEEGDRLCRALP-NCQTRRFGGGGHFLF-LEDGVDLVTTIKGAGYY 234 (435)
Q Consensus 170 l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~-~e~pe~~~~~I~~~~Fl 234 (435)
...+++|++++.+++|...... ..+....+ ..+++.+++ +|+.+ .++++++++.|.+ ||
T Consensus 193 ~~~~~~p~l~v~a~~~~~~~~~---~~w~~~~~~~~~~~~v~G-~H~~ml~~~~~~~A~~i~~--~L 253 (255)
T d1mo2a_ 193 PRETGLPTLLVSAGEPMGPWPD---DSWKPTWPFEHDTVAVPG-DHFTMVQEHADAIARHIDA--WL 253 (255)
T ss_dssp CCCCCCCEEEEECCSSSSCCTT---CCCCCCCCSSCEEEECCS-CCSSCSSCCHHHHHHHHHH--HH
T ss_pred CccccceEEEeecCCCCCcchh---hHHHHhCCCCcEEEEECC-CCcccccccHHHHHHHHHH--Hh
Confidence 3467899999999887654433 23444443 568999995 99855 4688999999999 55
|
| >d1fj2a_ c.69.1.14 (A:) Acyl protein thioesterase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Acyl protein thioesterase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.12 E-value=2e-10 Score=97.54 Aligned_cols=56 Identities=18% Similarity=0.045 Sum_probs=44.0
Q ss_pred hHHHHHHHHHHHHHhhhc-CCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCC
Q 013862 15 FTGLLKLIERTIRSENCR-SSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPA 70 (435)
Q Consensus 15 ~~~~a~dl~~~l~~l~~~-~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~ 70 (435)
+++.++.+..+++..... .+.++++++|+|+||.+|+.++.++|++++++|.+++.
T Consensus 89 i~~~~~~l~~li~~~~~~~i~~~ri~l~GfS~Gg~~a~~~~~~~~~~~~gvi~~sg~ 145 (229)
T d1fj2a_ 89 IKQAAENIKALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCW 145 (229)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCC
T ss_pred HHHHHHHHHHHhhhhhhcCCCccceeeeecccchHHHHHHHHhhccccCcccccccc
Confidence 455566666666655332 23468999999999999999999999999999988765
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Probab=98.92 E-value=1.3e-08 Score=90.43 Aligned_cols=62 Identities=16% Similarity=0.064 Sum_probs=48.2
Q ss_pred hhcccccceEEEEeeCCCCCCCChhHHHHHHhhCC-CceEEEeCCCCccccccCchhHHHHHhh
Q 013862 168 ARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALP-NCQTRRFGGGGHFLFLEDGVDLVTTIKG 230 (435)
Q Consensus 168 ~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~pe~~~~~I~~ 230 (435)
..+.++++|+|+++|++|.++|++ .+..+.+.++ +.++++++++||....+..+++.+-+++
T Consensus 252 ~~~~~i~~P~Lii~G~~D~~vp~~-~~~~~~~~l~~~~~l~~~~~~gH~~~~~~~~~~~~fl~~ 314 (318)
T d1l7aa_ 252 NLADRVKVPVLMSIGLIDKVTPPS-TVFAAYNHLETKKELKVYRYFGHEYIPAFQTEKLAFFKQ 314 (318)
T ss_dssp HHGGGCCSCEEEEEETTCSSSCHH-HHHHHHHHCCSSEEEEEETTCCSSCCHHHHHHHHHHHHH
T ss_pred cccccCCCCEEEEEECCCCCcCHH-HHHHHHHHcCCCcEEEEECCCCCCCcHHHHHHHHHHHHH
Confidence 345678999999999999999998 6888888876 5789999999997655444444444443
|
| >d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Putative serine hydrolase Ydr428c domain: Putative serine hydrolase Ydr428c species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.90 E-value=8e-09 Score=89.26 Aligned_cols=61 Identities=16% Similarity=0.060 Sum_probs=46.6
Q ss_pred hhcccccceEEEEeeCCCCCCCChhHHHHHHhhC----CCceEEEeCCCCccccccCchhHHHHHhh
Q 013862 168 ARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRAL----PNCQTRRFGGGGHFLFLEDGVDLVTTIKG 230 (435)
Q Consensus 168 ~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~----~~~~~~~i~~~gH~~~~e~pe~~~~~I~~ 230 (435)
..+.++.+|+++++|++|.++|.+ .+..+.+.+ .+.+++++++++|...+++ +++.+.|.+
T Consensus 196 ~~~~~~~~P~lii~G~~D~~vp~~-~s~~l~~~L~~~g~~~~~~~~~~~~H~~~~~~-~~~~~~i~~ 260 (263)
T d1vkha_ 196 KALSRFSIDMHLVHSYSDELLTLR-QTNCLISCLQDYQLSFKLYLDDLGLHNDVYKN-GKVAKYIFD 260 (263)
T ss_dssp HHHHHHTCEEEEEEETTCSSCCTH-HHHHHHHHHHHTTCCEEEEEECCCSGGGGGGC-HHHHHHHHH
T ss_pred ccccccCCCeeeeecCCCcccCHH-HHHHHHHHHHHCCCCEEEEEECCCCchhhhcC-hHHHHHHHH
Confidence 345567899999999999999998 577776644 3568999999999876666 446665554
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.85 E-value=8.4e-09 Score=85.45 Aligned_cols=56 Identities=20% Similarity=0.214 Sum_probs=44.0
Q ss_pred hHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCC
Q 013862 15 FTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPA 70 (435)
Q Consensus 15 ~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~ 70 (435)
+++.++++..+++......+.++++++|||+||.+++.++..+|+.+.++++.++.
T Consensus 75 ~~~~~~~~~~~l~~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~~~ 130 (203)
T d2r8ba1 75 LERATGKMADFIKANREHYQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPL 130 (203)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCC
T ss_pred HHHHHHHHHHHHHHhhhcCCCceEEEEEecCHHHHHHHHHHhhhhcccceeeeccc
Confidence 34445566666655443334578999999999999999999999999999998876
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Probab=98.84 E-value=1.8e-08 Score=83.83 Aligned_cols=36 Identities=22% Similarity=0.231 Sum_probs=33.6
Q ss_pred CCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCC
Q 013862 35 NRPVYLVGESLGACLALAVAARNPDMDLVLILANPA 70 (435)
Q Consensus 35 ~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~ 70 (435)
.++++++|||+||..++.++.++|++++++|++++.
T Consensus 103 ~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~~v~~~g~ 138 (209)
T d3b5ea1 103 LDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPM 138 (209)
T ss_dssp GGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCC
T ss_pred cCCEEEEeeCChHHHHHHHHHhCCCcceEEEEeCCc
Confidence 468999999999999999999999999999999876
|
| >d1jfra_ c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Lipase domain: Lipase species: Streptomyces exfoliatus [TaxId: 1905]
Probab=98.81 E-value=2.8e-08 Score=85.60 Aligned_cols=62 Identities=15% Similarity=0.288 Sum_probs=48.6
Q ss_pred cccceEEEEeeCCCCCCCChhHHHHHHhhCCC---ceEEEeCCCCccccccCchhHHHHHhhccccc
Q 013862 172 AVKAQTLILCSGRDQLLPSEEEGDRLCRALPN---CQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYR 235 (435)
Q Consensus 172 ~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~---~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~ 235 (435)
++++|+|+++|++|.++|.....+.+.+..+. .++++++|++|.........+.+.+.. ||+
T Consensus 162 ~~~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~i~ga~H~~~~~~~~~~~~~~~~--wl~ 226 (260)
T d1jfra_ 162 ELRTPTLVVGADGDTVAPVATHSKPFYESLPGSLDKAYLELRGASHFTPNTSDTTIAKYSIS--WLK 226 (260)
T ss_dssp TCCSCEEEEEETTCSSSCTTTTHHHHHHHSCTTSCEEEEEETTCCTTGGGSCCHHHHHHHHH--HHH
T ss_pred ccccceeEEecCCCCCCCHHHHHHHHHHhcccCCCEEEEEECCCccCCCCCChHHHHHHHHH--HHH
Confidence 45789999999999999987445666666543 368999999999887777778888888 554
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Probab=98.81 E-value=5e-08 Score=86.80 Aligned_cols=47 Identities=13% Similarity=-0.029 Sum_probs=40.1
Q ss_pred hcccccceEEEEeeCCCCCCCChhHHHHHHhhCC-CceEEEeCCCCccc
Q 013862 169 RLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALP-NCQTRRFGGGGHFL 216 (435)
Q Consensus 169 ~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~ 216 (435)
.+.++++|+|+++|++|.++|++ .+..+.+.++ ..++++++++||..
T Consensus 257 ~a~~i~~P~Lv~~G~~D~~vp~~-~~~~~~~~~~~~~~l~~~p~~~H~~ 304 (322)
T d1vlqa_ 257 FAARAKIPALFSVGLMDNICPPS-TVFAAYNYYAGPKEIRIYPYNNHEG 304 (322)
T ss_dssp HHTTCCSCEEEEEETTCSSSCHH-HHHHHHHHCCSSEEEEEETTCCTTT
T ss_pred HHhcCCCCEEEEEeCCCCCcCHH-HHHHHHHHCCCCeEEEEECCCCCCC
Confidence 45678999999999999999998 6888777765 47899999999954
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Probab=98.77 E-value=3.7e-08 Score=83.51 Aligned_cols=46 Identities=24% Similarity=0.207 Sum_probs=36.4
Q ss_pred ccceEEEEeeCCCCCCCChhHHHHHHhhCC------CceEEEeCCCCcccccc
Q 013862 173 VKAQTLILCSGRDQLLPSEEEGDRLCRALP------NCQTRRFGGGGHFLFLE 219 (435)
Q Consensus 173 i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~------~~~~~~i~~~gH~~~~e 219 (435)
.++|+|+++|++|.+++.+ ..+++.+.+. +.+++.++|+||.+.-|
T Consensus 171 ~~~P~li~~G~~D~~v~~~-~~~~~~~~l~~~~~~~~~~~~~~~g~gH~~~~~ 222 (238)
T d1ufoa_ 171 GGVPLLHLHGSRDHIVPLA-RMEKTLEALRPHYPEGRLARFVEEGAGHTLTPL 222 (238)
T ss_dssp TTCCEEEEEETTCTTTTHH-HHHHHHHHHGGGCTTCCEEEEEETTCCSSCCHH
T ss_pred cCCCeEEEEcCCCCccCHH-HHHHHHHHHHhcCCCceEEEEEECCCCCccCHH
Confidence 4679999999999999998 6777766442 45788899999987533
|
| >d2h1ia1 c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Bacillus cereus [TaxId: 1396]
Probab=98.75 E-value=4.2e-08 Score=81.00 Aligned_cols=36 Identities=19% Similarity=0.199 Sum_probs=33.2
Q ss_pred CCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCC
Q 013862 35 NRPVYLVGESLGACLALAVAARNPDMDLVLILANPA 70 (435)
Q Consensus 35 ~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~ 70 (435)
..++.++|+|+||.+++.++.++|+++.+++++++.
T Consensus 94 ~~~i~~~G~S~Gg~~a~~la~~~~~~~~~~~~~~~~ 129 (202)
T d2h1ia1 94 RNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPM 129 (202)
T ss_dssp TTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCC
T ss_pred ccceeeecccccchHHHHHHHhccccccceeeecCC
Confidence 468999999999999999999999999999988765
|
| >d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl peptidase IV/CD26, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.71 E-value=5.8e-08 Score=83.52 Aligned_cols=61 Identities=10% Similarity=0.158 Sum_probs=47.5
Q ss_pred cceEEEEeeCCCCCCCChhHHHHHHhh----CCCceEEEeCCCCcccc-ccCchhHHHHHhhccccccc
Q 013862 174 KAQTLILCSGRDQLLPSEEEGDRLCRA----LPNCQTRRFGGGGHFLF-LEDGVDLVTTIKGAGYYRRG 237 (435)
Q Consensus 174 ~~Pvlii~G~~D~~~~~~~~~~~~~~~----~~~~~~~~i~~~gH~~~-~e~pe~~~~~I~~~~Fl~~~ 237 (435)
++|+++++|++|..+|.. .++++.+. -.+.+++++++++|... .+..+++.+.+.+ ||++.
T Consensus 189 ~~P~li~hG~~D~~Vp~~-~s~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~i~~--fl~~~ 254 (258)
T d2bgra2 189 QVEYLLIHGTADDNVHFQ-QSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSH--FIKQC 254 (258)
T ss_dssp GSEEEEEEETTCSSSCTH-HHHHHHHHHHHHTCCCEEEEETTCCTTCCSHHHHHHHHHHHHH--HHHHH
T ss_pred cCChheeeecCCCcccHH-HHHHHHHHHHHCCCCEEEEEECCCCCCCCCCccHHHHHHHHHH--HHHHH
Confidence 479999999999999998 57666544 34679999999999754 3456777888888 77653
|
| >d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: Hypothetical protein Atu1826 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.65 E-value=2.5e-07 Score=77.22 Aligned_cols=125 Identities=18% Similarity=0.249 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHhhhcCC-CCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccccccccccccccccccccchhHHH
Q 013862 18 LLKLIERTIRSENCRSS-NRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSFRKSLLQTIMPIPAELMSGQMTLT 96 (435)
Q Consensus 18 ~a~dl~~~l~~l~~~~~-~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (435)
-.+|..+.++.+..... ..+++++|+|+||.+++.++.+.+ .+.+++++.+..... .
T Consensus 80 e~~d~~aa~~~~~~~~~~~~~~~~~g~S~G~~~a~~~a~~~~-~~~~~~~~~~~~~~~---------------~------ 137 (218)
T d2i3da1 80 ELSDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRP-EIEGFMSIAPQPNTY---------------D------ 137 (218)
T ss_dssp HHHHHHHHHHHHHHHCTTCCCEEEEEETHHHHHHHHHHHHCT-TEEEEEEESCCTTTS---------------C------
T ss_pred HHHHHHHHHhhhhcccccccceeEEeeehHHHHHHHHHHhhc-cccceeecccccccc---------------c------
Confidence 34555666666544332 357999999999999999988875 456667666552100 0
Q ss_pred HHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhhhhhhcccccce
Q 013862 97 LSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAYANARLDAVKAQ 176 (435)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 176 (435)
...+....+|
T Consensus 138 ----------------------------------------------------------------------~~~~~~~~~p 147 (218)
T d2i3da1 138 ----------------------------------------------------------------------FSFLAPCPSS 147 (218)
T ss_dssp ----------------------------------------------------------------------CTTCTTCCSC
T ss_pred ----------------------------------------------------------------------hhhccccCCC
Confidence 0112334679
Q ss_pred EEEEeeCCCCCCCChhHHHHHHhhCC-----CceEEEeCCCCccccccCchhHHHHHhhcccccccc
Q 013862 177 TLILCSGRDQLLPSEEEGDRLCRALP-----NCQTRRFGGGGHFLFLEDGVDLVTTIKGAGYYRRGR 238 (435)
Q Consensus 177 vlii~G~~D~~~~~~~~~~~~~~~~~-----~~~~~~i~~~gH~~~~e~pe~~~~~I~~~~Fl~~~~ 238 (435)
+++++|+.|.+++.. ....+.+.+. ..++++++|++|+.. .+.+++.+.+.+ ||.+.-
T Consensus 148 ~l~i~g~~D~~~~~~-~~~~l~~~~~~~~~~~~~~~vi~gAdHfF~-g~~~~l~~~v~~--~l~~~l 210 (218)
T d2i3da1 148 GLIINGDADKVAPEK-DVNGLVEKLKTQKGILITHRTLPGANHFFN-GKVDELMGECED--YLDRRL 210 (218)
T ss_dssp EEEEEETTCSSSCHH-HHHHHHHHHTTSTTCCEEEEEETTCCTTCT-TCHHHHHHHHHH--HHHHHH
T ss_pred ceeeecccceecChH-HHHHHHHHHhhccCCCccEEEeCCCCCCCc-CCHHHHHHHHHH--HHHHhc
Confidence 999999999999988 5666654432 348999999999865 677899999999 776443
|
| >d1dina_ c.69.1.9 (A:) Dienelactone hydrolase {Pseudomonas sp., B13 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Dienelactone hydrolase domain: Dienelactone hydrolase species: Pseudomonas sp., B13 [TaxId: 306]
Probab=98.60 E-value=3.1e-07 Score=77.47 Aligned_cols=50 Identities=20% Similarity=0.329 Sum_probs=38.8
Q ss_pred ccccceEEEEeeCCCCCCCChhHHHHHHhh---CCCceEEEeCCCCccccccCc
Q 013862 171 DAVKAQTLILCSGRDQLLPSEEEGDRLCRA---LPNCQTRRFGGGGHFLFLEDG 221 (435)
Q Consensus 171 ~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~---~~~~~~~~i~~~gH~~~~e~p 221 (435)
.++++|+|+++|++|..+|.+ ..+.+.+. -++.++++++|++|....+..
T Consensus 157 ~~i~~Pvl~~~G~~D~~vp~e-~~~~~~~~~~~~~~~~~~~y~ga~HgF~~~~~ 209 (233)
T d1dina_ 157 PEVKHPALFHMGGQDHFVPAP-SRQLITEGFGANPLLQVHWYEEAGHSFARTSS 209 (233)
T ss_dssp GGCCSCEEEEEETTCTTSCHH-HHHHHHHHHTTCTTEEEEEETTCCTTTTCTTS
T ss_pred hccCCcceeeecccccCCCHH-HHHHHHHHHhcCCCEEEEEECCCCcCCCCCCC
Confidence 457899999999999999988 56665543 345689999999997764433
|
| >d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.56 E-value=9.2e-08 Score=82.19 Aligned_cols=61 Identities=15% Similarity=0.194 Sum_probs=45.8
Q ss_pred cceEEEEeeCCCCCCCChhHHHHHHhh----CCCceEEEeCCCCccccc-cCchhHHHHHhhccccccc
Q 013862 174 KAQTLILCSGRDQLLPSEEEGDRLCRA----LPNCQTRRFGGGGHFLFL-EDGVDLVTTIKGAGYYRRG 237 (435)
Q Consensus 174 ~~Pvlii~G~~D~~~~~~~~~~~~~~~----~~~~~~~~i~~~gH~~~~-e~pe~~~~~I~~~~Fl~~~ 237 (435)
++|+|+++|+.|..+|+. ...++.+. -.+.+++++|+++|.... +....+.+.+.+ |+++.
T Consensus 190 ~~p~Li~hG~~D~~vp~~-~s~~~~~~l~~~~~~~~~~~~p~~~H~~~~~~~~~~~~~~~~~--f~~~~ 255 (258)
T d1xfda2 190 EQQFLIIHPTADEKIHFQ-HTAELITQLIRGKANYSLQIYPDESHYFTSSSLKQHLYRSIIN--FFVEC 255 (258)
T ss_dssp SCEEEEEEETTCSSSCHH-HHHHHHHHHHHTTCCCEEEEETTCCSSCCCHHHHHHHHHHHHH--HHTTT
T ss_pred cccccccccCCCCCcCHH-HHHHHHHHHHHCCCCEEEEEECCCCCCCCCCcCHHHHHHHHHH--HHHHh
Confidence 689999999999999987 56555443 346689999999997643 345556677777 77643
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Probab=98.55 E-value=4.9e-08 Score=86.70 Aligned_cols=55 Identities=20% Similarity=0.238 Sum_probs=49.9
Q ss_pred CChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCc
Q 013862 13 HHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPAT 71 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~ 71 (435)
.+.+++++++.++++.++. +++++|||||||.++..++.++|++|+++|+++++.
T Consensus 60 ~~~~~l~~~i~~~~~~~~~----~~v~lvGhS~GG~~~~~~~~~~p~~v~~vv~i~~p~ 114 (319)
T d1cvla_ 60 GRGEQLLAYVKQVLAATGA----TKVNLIGHSQGGLTSRYVAAVAPQLVASVTTIGTPH 114 (319)
T ss_dssp SHHHHHHHHHHHHHHHHCC----SCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred ccHHHHHHHHHHHHHHhCC----CCEEEEeccccHHHHHHHHHHCccccceEEEECCCC
Confidence 4578889999999998876 599999999999999999999999999999999864
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Probab=98.53 E-value=1.9e-07 Score=81.70 Aligned_cols=59 Identities=15% Similarity=-0.005 Sum_probs=48.2
Q ss_pred CChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCC---CceeEEEEecCCc
Q 013862 13 HHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNP---DMDLVLILANPAT 71 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p---~~v~~lVli~~~~ 71 (435)
.+.+..++++.+.++.+....+.++++||||||||.++..++.++| ++|+++|.+++..
T Consensus 74 ~d~~~sae~la~~i~~v~~~~g~~kV~lVGhS~GG~~a~~~l~~~p~~~~~V~~~v~i~~~~ 135 (317)
T d1tcaa_ 74 NDTQVNTEYMVNAITALYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDY 135 (317)
T ss_dssp SCHHHHHHHHHHHHHHHHHHTTSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCT
T ss_pred CchHhHHHHHHHHHHHHHHhccCCceEEEEeCchHHHHHHHHHHCCCcchheeEEEEeCCCC
Confidence 4566667777777777655555579999999999999999999998 4799999999874
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Probab=98.52 E-value=4.5e-08 Score=72.72 Aligned_cols=51 Identities=16% Similarity=0.062 Sum_probs=44.5
Q ss_pred CccccccCCCCCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCC
Q 013862 2 YGACIFQLQIGHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPD 59 (435)
Q Consensus 2 yG~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~ 59 (435)
||.|.. ..++.+++++++.++++++++ ++++++||||||.+++++++..++
T Consensus 52 ~G~S~~---p~~s~~~~a~~i~~ll~~L~i----~~~~viG~S~Gg~ia~~laa~~~~ 102 (122)
T d2dsta1 52 YGRTEG---PRMAPEELAHFVAGFAVMMNL----GAPWVLLRGLGLALGPHLEALGLR 102 (122)
T ss_dssp STTCCC---CCCCHHHHHHHHHHHHHHTTC----CSCEEEECGGGGGGHHHHHHTTCC
T ss_pred cCCCCC---cccccchhHHHHHHHHHHhCC----CCcEEEEeCccHHHHHHHHhhccc
Confidence 677753 358999999999999999999 489999999999999999997654
|
| >d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=98.50 E-value=2.5e-07 Score=77.17 Aligned_cols=52 Identities=17% Similarity=0.156 Sum_probs=36.0
Q ss_pred HHHHHHHHHHhhh-cCCCCCEEEEEeChhHHHHHHHHHhC-CCceeEEEEecCC
Q 013862 19 LKLIERTIRSENC-RSSNRPVYLVGESLGACLALAVAARN-PDMDLVLILANPA 70 (435)
Q Consensus 19 a~dl~~~l~~l~~-~~~~~~~~lvGhS~Gg~va~~~a~~~-p~~v~~lVli~~~ 70 (435)
.+.+.++++.... ....++++++|+|+||.+++.++..+ +..+.++|.+++.
T Consensus 88 ~~~v~~li~~~~~~~i~~~ri~l~GfSqGg~~a~~~~l~~~~~~~~~~v~~~g~ 141 (218)
T d1auoa_ 88 AKMVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTY 141 (218)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCC
T ss_pred HHHHHHHHHHHHHhCCCCcceEEeeeCcchHHHHHHHHhcccccceeeeecccc
Confidence 3334445544321 11246899999999999999988654 6678888888764
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.44 E-value=1.5e-07 Score=81.87 Aligned_cols=54 Identities=24% Similarity=0.201 Sum_probs=44.9
Q ss_pred ChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCc
Q 013862 14 HFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPAT 71 (435)
Q Consensus 14 s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~ 71 (435)
+.+++++++.++++.++. +++++|||||||.++..++.++|++|+++|.++++.
T Consensus 56 ~a~~l~~~i~~~~~~~g~----~~v~ligHS~GG~~~r~~~~~~p~~v~~lv~i~tPh 109 (285)
T d1ex9a_ 56 RGEQLLQQVEEIVALSGQ----PKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAPH 109 (285)
T ss_dssp HHHHHHHHHHHHHHHHCC----SCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred HHHHHHHHHHHHHHHcCC----CeEEEEEECccHHHHHHHHHHCCccceeEEEECCCC
Confidence 345566666666666665 589999999999999999999999999999998764
|
| >d2pbla1 c.69.1.2 (A:1-261) Uncharacterized protein TM1040_2492 {Silicibacter sp. tm1040 [TaxId: 292414]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Uncharacterized protein TM1040 2492 species: Silicibacter sp. tm1040 [TaxId: 292414]
Probab=98.39 E-value=9.9e-07 Score=75.50 Aligned_cols=136 Identities=14% Similarity=0.127 Sum_probs=86.4
Q ss_pred CCChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCC------CceeEEEEecCCccccccccccccccc
Q 013862 12 GHHFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNP------DMDLVLILANPATSFRKSLLQTIMPIP 85 (435)
Q Consensus 12 ~~s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p------~~v~~lVli~~~~~~~~~~~~~~~~~~ 85 (435)
..++.+..+|+.+.++.+....+ .++.|+|||.||.++..++.... ..+++++.+++.........
T Consensus 105 ~~~~p~~~~d~~~a~~~~~~~~~-~rI~l~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 176 (261)
T d2pbla1 105 EVRISEITQQISQAVTAAAKEID-GPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLR------- 176 (261)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHSC-SCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGG-------
T ss_pred cccCchhHHHHHHHHHHHHhccc-CceEEEEcchHHHHHHHHhcCcccccchhhchhhhhccccccccchhhh-------
Confidence 46788999999999988876544 58999999999999987765432 35788888877643221100
Q ss_pred cccccchhHHHHHHHHHhhcCChhHHHHHhhhhccchhHHHHHhHHhHHhhhcchhHHhccCCchhhhhHHhhhhhhhhh
Q 013862 86 AELMSGQMTLTLSYLLSLLTGDPLKMAMDSIVKGLFLQSTIQERSQDFVAMSSYLPVLANILPKETLLWKLELLKSASAY 165 (435)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (435)
. .. ... . ...++. ... . .
T Consensus 177 --~---~~----~~~---~--------------~~~~~~--------~~~-----------~-----------------S 194 (261)
T d2pbla1 177 --T---SM----NEK---F--------------KMDADA--------AIA-----------E-----------------S 194 (261)
T ss_dssp --S---TT----HHH---H--------------CCCHHH--------HHH-----------T-----------------C
T ss_pred --h---hh----ccc---c--------------cCCHHH--------HHH-----------h-----------------C
Confidence 0 00 000 0 000000 000 0 0
Q ss_pred hhhhcccccceEEEEeeCCCCCCCChhHHHHHHhhCCCceEEEeCCCCcccccc
Q 013862 166 ANARLDAVKAQTLILCSGRDQLLPSEEEGDRLCRALPNCQTRRFGGGGHFLFLE 219 (435)
Q Consensus 166 ~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e 219 (435)
........+.|+++++|++|..++.+ +++.+.+.+ +++.+++++.+|+-.++
T Consensus 195 P~~~~~~~~~P~li~~G~~D~~~~~~-qs~~~~~~l-~~~~~~~~~~~HF~vi~ 246 (261)
T d2pbla1 195 PVEMQNRYDAKVTVWVGGAERPAFLD-QAIWLVEAW-DADHVIAFEKHHFNVIE 246 (261)
T ss_dssp GGGCCCCCSCEEEEEEETTSCHHHHH-HHHHHHHHH-TCEEEEETTCCTTTTTG
T ss_pred chhhcccCCCeEEEEEecCCCchHHH-HHHHHHHHh-CCCceEeCCCCchhHHH
Confidence 01223456789999999999877666 677887776 46788999999975443
|
| >d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal xylanase z {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase z species: Clostridium thermocellum [TaxId: 1515]
Probab=98.32 E-value=1.4e-06 Score=74.36 Aligned_cols=56 Identities=18% Similarity=0.140 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHhhh-cCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCc
Q 013862 16 TGLLKLIERTIRSENC-RSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPAT 71 (435)
Q Consensus 16 ~~~a~dl~~~l~~l~~-~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~ 71 (435)
+.+++++...++.... ....+++.++|+|+||..++.+|.+||+++++++.+++..
T Consensus 114 ~~~~~~li~~i~~~~~~~~d~~~i~i~G~S~GG~~a~~~a~~~Pd~F~~v~~~sg~~ 170 (255)
T d1jjfa_ 114 KDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAP 170 (255)
T ss_dssp HHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCT
T ss_pred HHHHHHHHHHHHHhhccccccceeEeeeccchhHHHHHHHHhCCCcccEEEEEccCc
Confidence 3444455555544321 1123569999999999999999999999999999888763
|
| >d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PHB depolymerase-like domain: Polyhydroxybutyrate depolymerase species: Penicillium funiculosum [TaxId: 28572]
Probab=98.31 E-value=2.1e-06 Score=75.04 Aligned_cols=47 Identities=13% Similarity=0.043 Sum_probs=37.4
Q ss_pred ccceEEEEeeCCCCCCCChhHHHHHHhhCC------CceEEEeCCCCccccccC
Q 013862 173 VKAQTLILCSGRDQLLPSEEEGDRLCRALP------NCQTRRFGGGGHFLFLED 220 (435)
Q Consensus 173 i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~------~~~~~~i~~~gH~~~~e~ 220 (435)
.+.|+++++|++|..+++. ..+.+.+.+. +.+++..+++||-...+.
T Consensus 89 ~~~pvll~hG~~D~~Vpp~-~s~~l~~~l~~~~~~~~v~yv~~~gagH~fpT~~ 141 (318)
T d2d81a1 89 GQRKIYMWTGSSDTTVGPN-VMNQLKAQLGNFDNSANVSYVTTTGAVHTFPTDF 141 (318)
T ss_dssp GGCEEEEEEETTCCSSCHH-HHHHHHHHHTTTSCGGGEEEEEETTCCSSEEESS
T ss_pred CCCCEEEEecCCCCCcCHH-HHHHHHHHHHcCcCCCceEEEEeCCCCCCCCCCC
Confidence 3579999999999999998 6777776553 246788899999887653
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Probab=98.30 E-value=5.7e-06 Score=75.64 Aligned_cols=56 Identities=18% Similarity=0.138 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHhhhc----------------CCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCccc
Q 013862 18 LLKLIERTIRSENCR----------------SSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATSF 73 (435)
Q Consensus 18 ~a~dl~~~l~~l~~~----------------~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~~ 73 (435)
-++|..++|+.+... -.+.++.++|+|+||..++.+|...|..++++|..++....
T Consensus 161 e~~D~~~~IeWl~~~~~~~~~~~~~~~~~q~WsnGkVGm~G~SY~G~~q~~aA~~~pp~LkAivp~~~~~d~ 232 (405)
T d1lnsa3 161 QIYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSYLGTMAYGAATTGVEGLELILAEAGISSW 232 (405)
T ss_dssp HHHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETHHHHHHHHHHTTTCTTEEEEEEESCCSBH
T ss_pred hhhhHHHHHHHHHhcccccccccccccccccccCCeeEEEecCHHHHHHHHHHhcCCccceEEEecCccccH
Confidence 477888888887531 11347999999999999999999999999999998887654
|
| >d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.12 E-value=1.5e-05 Score=67.68 Aligned_cols=55 Identities=18% Similarity=0.140 Sum_probs=42.7
Q ss_pred hHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCC-ceeEEEEecCCc
Q 013862 15 FTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPD-MDLVLILANPAT 71 (435)
Q Consensus 15 ~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~-~v~~lVli~~~~ 71 (435)
+++.++.+.+.|+.... ..+++++|||||||.++-.++.++++ .|..+|.++++-
T Consensus 61 ~~~~~e~v~~~I~~~~~--~~~~v~lVGhSqGGLiaR~~i~~~~~~~V~~lITLgsPH 116 (279)
T d1ei9a_ 61 VNSQVTTVCQILAKDPK--LQQGYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQH 116 (279)
T ss_dssp HHHHHHHHHHHHHSCGG--GTTCEEEEEETTHHHHHHHHHHHCCSSCEEEEEEESCCT
T ss_pred HHHHHHHHHHHHHhccc--cccceeEEEEccccHHHHHHHHHcCCCCcceEEEECCCC
Confidence 55666666666654322 13579999999999999999999986 599999998874
|
| >d3c8da2 c.69.1.2 (A:151-396) Enterochelin esterase, catalytic domain {Shigella flexneri 2a str. 2457T [TaxId: 198215]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Enterochelin esterase, catalytic domain species: Shigella flexneri 2a str. 2457T [TaxId: 198215]
Probab=98.10 E-value=5.7e-06 Score=70.06 Aligned_cols=54 Identities=11% Similarity=0.076 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHhhh-cCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCc
Q 013862 18 LLKLIERTIRSENC-RSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPAT 71 (435)
Q Consensus 18 ~a~dl~~~l~~l~~-~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~ 71 (435)
+.+++..+++.... ....+++.++|+||||..|+.++.+||+++++++.+++..
T Consensus 104 ~~~el~~~v~~~~~~~~d~~~~~i~G~S~GG~~al~~~~~~P~~F~a~~~~sg~~ 158 (246)
T d3c8da2 104 VQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSY 158 (246)
T ss_dssp HHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCT
T ss_pred HHHHhhhHHHHhcccccCccceEEEecCchhHHHhhhhccCCchhcEEEcCCccc
Confidence 34566666665422 1123568999999999999999999999999999999874
|
| >d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Bacterial cocaine esterase N-terminal domain species: Rhodococcus sp. mb1 [TaxId: 51612]
Probab=97.92 E-value=8.5e-06 Score=72.83 Aligned_cols=57 Identities=9% Similarity=-0.130 Sum_probs=43.3
Q ss_pred ChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcc
Q 013862 14 HFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATS 72 (435)
Q Consensus 14 s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~ 72 (435)
..++-+.|+.+.+...... +.++.++|+|+||.+++.+|+..|..++++|...+...
T Consensus 85 ~~~~d~~d~i~w~~~q~~~--~grVg~~G~SygG~~~~~~A~~~~~~l~aiv~~~~~~d 141 (347)
T d1ju3a2 85 DDEADAEDTLSWILEQAWC--DGNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASAD 141 (347)
T ss_dssp THHHHHHHHHHHHHHSTTE--EEEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSC
T ss_pred chhhhHHHHHHHHHhhccC--CcceEeeeccccccchhhhhhcccccceeeeeccccch
Confidence 3344445555555554443 35899999999999999999999999999998887764
|
| >d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85a species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.87 E-value=0.0002 Score=61.74 Aligned_cols=53 Identities=17% Similarity=0.083 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCc
Q 013862 18 LLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPAT 71 (435)
Q Consensus 18 ~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~ 71 (435)
+++++...|++.-... .+++.+.|+||||..|+.++.++|+++++++.+++..
T Consensus 102 ~~~el~~~i~~~~~~d-~~r~~i~G~S~GG~~A~~~a~~~pd~f~av~~~Sg~~ 154 (288)
T d1sfra_ 102 LTSELPGWLQANRHVK-PTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLL 154 (288)
T ss_dssp HHTHHHHHHHHHHCBC-SSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCS
T ss_pred HHHHhHHHHHHhcCCC-CCceEEEEEccHHHHHHHHHHhccccccEEEEecCcc
Confidence 4566666665543322 3479999999999999999999999999999998874
|
| >d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Prolyl oligopeptidase, C-terminal domain domain: Prolyl oligopeptidase, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.83 E-value=6.5e-05 Score=64.23 Aligned_cols=37 Identities=22% Similarity=0.233 Sum_probs=31.9
Q ss_pred CCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCc
Q 013862 35 NRPVYLVGESLGACLALAVAARNPDMDLVLILANPAT 71 (435)
Q Consensus 35 ~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~ 71 (435)
+....++|+|.||..+...+...++.++.++...+..
T Consensus 115 ~~~~~~~~g~~gg~~~~~~~~~~~~~~~~~~~~~~~~ 151 (280)
T d1qfma2 115 PKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVM 151 (280)
T ss_dssp GGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCC
T ss_pred cccccccccccccchhhhhhhcccchhhheeeecccc
Confidence 4578899999999999999999999888888777664
|
| >d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen pt51/mpb51 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.83 E-value=0.00036 Score=59.33 Aligned_cols=58 Identities=16% Similarity=0.031 Sum_probs=45.2
Q ss_pred CChHHH-HHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCc
Q 013862 13 HHFTGL-LKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPAT 71 (435)
Q Consensus 13 ~s~~~~-a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~ 71 (435)
+.++++ .++|...|+..-.. ..++..+.|+||||..|+.+|.+||+++++++.+++..
T Consensus 82 ~~~~tfl~~eL~~~i~~~~~~-d~~r~~i~G~SmGG~~Al~la~~~Pd~F~av~~~SG~~ 140 (267)
T d1r88a_ 82 KQWDTFLSAELPDWLAANRGL-APGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFL 140 (267)
T ss_dssp CBHHHHHHTHHHHHHHHHSCC-CSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCC
T ss_pred ccHHHHHHHHHHHHHHHhcCC-CCCceEEEEEcchHHHHHHHHHhCcccccEEEEeCCcc
Confidence 345544 45777777654221 23578899999999999999999999999999999874
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Probab=97.77 E-value=1.7e-05 Score=69.35 Aligned_cols=68 Identities=15% Similarity=0.139 Sum_probs=52.2
Q ss_pred hhcccccceEEEEeeCCCCCCCChh--------HHHHHHhhCCCceEEEeC-----CCCccccccCc-hhHHHHHhhccc
Q 013862 168 ARLDAVKAQTLILCSGRDQLLPSEE--------EGDRLCRALPNCQTRRFG-----GGGHFLFLEDG-VDLVTTIKGAGY 233 (435)
Q Consensus 168 ~~l~~i~~Pvlii~G~~D~~~~~~~--------~~~~~~~~~~~~~~~~i~-----~~gH~~~~e~p-e~~~~~I~~~~F 233 (435)
.....+++|+|+++|++|..+|... ..+.+.+..++++++.++ |+||+++.|.+ +++++.|.+ |
T Consensus 235 ~~~~~~~~P~Lii~G~~D~~~p~~~~~~~~~~~~~~~l~~~g~~~~~~~lp~~gi~G~gH~~~~e~~~~~va~~i~~--w 312 (318)
T d1qlwa_ 235 DVKPLTSIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQVADLILD--W 312 (318)
T ss_dssp GCGGGTTSCEEEEECSSCTTCTTTHHHHHHHHHHHHHHHHTTCCEEEEEGGGGTCCCCCTTGGGSTTHHHHHHHHHH--H
T ss_pred hhhhhccCCEEEEecCcCcccChhhhHHHHHHHHHHHHHHhCCCcEEEEecccccCCCcCccccCcCHHHHHHHHHH--H
Confidence 4556778999999999999999641 122344455678888865 67899999875 899999999 8
Q ss_pred cccc
Q 013862 234 YRRG 237 (435)
Q Consensus 234 l~~~ 237 (435)
|++.
T Consensus 313 L~~~ 316 (318)
T d1qlwa_ 313 IGRN 316 (318)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 7654
|
| >d1jkma_ c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis, brefeldin A esterase [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Bacillus subtilis, brefeldin A esterase [TaxId: 1423]
Probab=97.45 E-value=0.00023 Score=63.39 Aligned_cols=57 Identities=19% Similarity=0.032 Sum_probs=37.0
Q ss_pred hHHHHHHHHHHHHHhhh---cCCCCCEEEEEeChhHHHHHHHHHh-----CCCceeEEEEecCCc
Q 013862 15 FTGLLKLIERTIRSENC---RSSNRPVYLVGESLGACLALAVAAR-----NPDMDLVLILANPAT 71 (435)
Q Consensus 15 ~~~~a~dl~~~l~~l~~---~~~~~~~~lvGhS~Gg~va~~~a~~-----~p~~v~~lVli~~~~ 71 (435)
+....+|..+.++.+.. ..+.+++.|+|+|.||.+|+.++.. ....+.++++..|..
T Consensus 158 ~p~~l~D~~~a~~wl~~~~~~~~~~ri~i~G~SAGG~La~~~a~~~~~~~~~~~~~~~~~~~p~~ 222 (358)
T d1jkma_ 158 FPSGVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYI 222 (358)
T ss_dssp TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCC
T ss_pred CchhhHHHHHHHHHHHHhccccCCccceeecccCchHHHHHHHHHHhhcCCCcccccccccccee
Confidence 44556666555554321 1123589999999999999877654 234577888877764
|
| >d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Xanthomonas citri [TaxId: 346]
Probab=97.45 E-value=0.00055 Score=61.45 Aligned_cols=54 Identities=17% Similarity=0.025 Sum_probs=42.4
Q ss_pred HHHHHHHHHHhhhc--CCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcc
Q 013862 19 LKLIERTIRSENCR--SSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATS 72 (435)
Q Consensus 19 a~dl~~~l~~l~~~--~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~ 72 (435)
++|..+.++.+... -.+.++.++|+|+||..++.+|...|+.++++|..++...
T Consensus 124 ~~D~~~~i~w~~~~~~~~~~~vg~~G~SygG~~~~~~a~~~~~~l~a~v~~~~~~d 179 (381)
T d1mpxa2 124 ATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMID 179 (381)
T ss_dssp HHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTTEEEEEEESCCCC
T ss_pred HHHHHHHHHHHhhcCCcCccceeeecccHHHHHHHHHHhccccccceeeeeccccc
Confidence 56666666655332 1235899999999999999999999999999999887754
|
| >d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.42 E-value=0.00018 Score=61.82 Aligned_cols=58 Identities=16% Similarity=0.027 Sum_probs=46.2
Q ss_pred CChHHH-HHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCc
Q 013862 13 HHFTGL-LKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPAT 71 (435)
Q Consensus 13 ~s~~~~-a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~ 71 (435)
..++++ +++|...|++.-... .++..+.|+||||..|+.+|+++|+++++++.+++..
T Consensus 91 ~~~~~~~~~el~~~i~~~~~~d-~~r~~i~G~SmGG~~Al~lA~~~Pd~F~av~s~SG~~ 149 (280)
T d1dqza_ 91 YKWETFLTREMPAWLQANKGVS-PTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFL 149 (280)
T ss_dssp CBHHHHHHTHHHHHHHHHHCCC-SSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCC
T ss_pred hhHHHHHHHHHHHHHHHhcCCC-CCceEEEEechHHHHHHHHHHhCcCceeEEEEecCcc
Confidence 345554 677888887654322 3468899999999999999999999999999999874
|
| >d1u4na_ c.69.1.2 (A:) Carboxylesterase {Alicyclobacillus acidocaldarius [TaxId: 405212]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Alicyclobacillus acidocaldarius [TaxId: 405212]
Probab=97.34 E-value=0.00012 Score=63.91 Aligned_cols=59 Identities=19% Similarity=0.207 Sum_probs=38.1
Q ss_pred CChHHHHHHHHHHHHHhhhcC-----CCCCEEEEEeChhHHHHHHHHHhCCC----ceeEEEEecCCc
Q 013862 13 HHFTGLLKLIERTIRSENCRS-----SNRPVYLVGESLGACLALAVAARNPD----MDLVLILANPAT 71 (435)
Q Consensus 13 ~s~~~~a~dl~~~l~~l~~~~-----~~~~~~lvGhS~Gg~va~~~a~~~p~----~v~~lVli~~~~ 71 (435)
..+....+|+.+.++.+.... ..+++.+.|+|.||.+++.++....+ .+.+..++.+..
T Consensus 117 ~~~p~~~~D~~~~~~~l~~~~~~~~~d~~ri~~~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (308)
T d1u4na_ 117 HKFPAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPST 184 (308)
T ss_dssp SCTTHHHHHHHHHHHHHHTTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHHTCCCCCCEEEESCCC
T ss_pred cccccccchhhhhhhHHHHhHHhcCCCcceEEEeeccccchhHHHHHHhhhhccCCCccccccccccc
Confidence 445566666666666554321 12469999999999999888765432 345556666554
|
| >d1jjia_ c.69.1.2 (A:) Carboxylesterase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.32 E-value=0.00034 Score=60.97 Aligned_cols=59 Identities=20% Similarity=0.185 Sum_probs=36.8
Q ss_pred ChHHHHHHHHHHHHHhhhc-----CCCCCEEEEEeChhHHHHHHHHHhC----CCceeEEEEecCCcc
Q 013862 14 HFTGLLKLIERTIRSENCR-----SSNRPVYLVGESLGACLALAVAARN----PDMDLVLILANPATS 72 (435)
Q Consensus 14 s~~~~a~dl~~~l~~l~~~-----~~~~~~~lvGhS~Gg~va~~~a~~~----p~~v~~lVli~~~~~ 72 (435)
.+....+|..+.++.+... ...+++.++|+|.||.+++.++... .....+.+++.|...
T Consensus 125 ~~p~~~~d~~~a~~~~~~~~~~~~~d~~ri~v~G~SaGG~la~~~~~~~~~~~~~~~~~~~l~~p~~~ 192 (311)
T d1jjia_ 125 KFPAAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVN 192 (311)
T ss_dssp CTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCC
T ss_pred ccchhhhhhhhhhhHHHHhHHHhCcChhHEEEEeeecCCcceeechhhhhhccccccceeeeecceee
Confidence 4444555555554443221 0124799999999999888776442 345777888887754
|
| >d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.29 E-value=0.0047 Score=55.91 Aligned_cols=71 Identities=11% Similarity=-0.099 Sum_probs=49.9
Q ss_pred ccccccCCCCCChHHHHHHHHHHHHHhhhcCC-----CCCEEEEEeChhHHHHHHHHHhC---C---CceeEEEEecCCc
Q 013862 3 GACIFQLQIGHHFTGLLKLIERTIRSENCRSS-----NRPVYLVGESLGACLALAVAARN---P---DMDLVLILANPAT 71 (435)
Q Consensus 3 G~s~~p~~~~~s~~~~a~dl~~~l~~l~~~~~-----~~~~~lvGhS~Gg~va~~~a~~~---p---~~v~~lVli~~~~ 71 (435)
|.|.......++-.+.++|+.++++..-..++ +.+++|.|-|+||..+-.+|.+- . -.++++++.++..
T Consensus 100 GfSy~~~~~~~~~~~~a~d~~~fl~~f~~~fp~~~~k~~~~yi~GESYgG~yvP~la~~i~~~~~~~inlkGi~iGng~~ 179 (421)
T d1wpxa1 100 GFSYSGSSGVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGESYAGHYIPVFASEILSHKDRNFNLTSVLIGNGLT 179 (421)
T ss_dssp TTCBCSSCCCCSHHHHHHHHHHHHHHHHHHCTHHHHTCCCEEEEEETTHHHHHHHHHHHHHHCSSCSSCCCEEEEESCCC
T ss_pred CceecCCccccchHHHHHHHHHHHHHHHHhChhhhccCCCcEEeeecccccccHHHHHHHHHccCCCcceeeeEecCCcc
Confidence 44544444556777778888888766544433 35899999999999988877542 2 2578999999876
Q ss_pred cc
Q 013862 72 SF 73 (435)
Q Consensus 72 ~~ 73 (435)
..
T Consensus 180 dp 181 (421)
T d1wpxa1 180 DP 181 (421)
T ss_dssp CH
T ss_pred cc
Confidence 43
|
| >d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Heroin esterase species: Rhodococcus sp. [TaxId: 1831]
Probab=97.21 E-value=0.0013 Score=57.12 Aligned_cols=41 Identities=22% Similarity=0.087 Sum_probs=29.4
Q ss_pred cceEEEEeeCCCCCCCChhHHHHHHh----hCCCceEEEeCCCCcccc
Q 013862 174 KAQTLILCSGRDQLLPSEEEGDRLCR----ALPNCQTRRFGGGGHFLF 217 (435)
Q Consensus 174 ~~Pvlii~G~~D~~~~~~~~~~~~~~----~~~~~~~~~i~~~gH~~~ 217 (435)
..|+++++|++|... + .+..+.+ .--.++++++++++|...
T Consensus 248 ~pp~li~~g~~D~l~--~-~~~~~~~~L~~~G~~v~~~~~~g~~H~f~ 292 (317)
T d1lzla_ 248 LPPTYLSTMELDPLR--D-EGIEYALRLLQAGVSVELHSFPGTFHGSA 292 (317)
T ss_dssp CCCEEEEEETTCTTH--H-HHHHHHHHHHHTTCCEEEEEETTCCTTGG
T ss_pred CCCeEEEECCCCCCH--H-HHHHHHHHHHHCCCCEEEEEECcCccCCc
Confidence 469999999999653 2 3444443 334579999999999543
|
| >d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Dog (Canis familiaris) [TaxId: 9615]
Probab=97.17 E-value=0.00033 Score=60.81 Aligned_cols=56 Identities=20% Similarity=0.113 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHhhhc--CCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcc
Q 013862 16 TGLLKLIERTIRSENCR--SSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATS 72 (435)
Q Consensus 16 ~~~a~dl~~~l~~l~~~--~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~ 72 (435)
....+.+.++|+.+... ...++++|||||+||.+|. +|.++..++.+++.++|+.+
T Consensus 124 ~~Vg~~ia~~i~~l~~~~g~~~~~vhlIGhSLGAhvAG-~aG~~~~~l~rItgLDPA~P 181 (337)
T d1rp1a2 124 RVVGAQVAQMLSMLSANYSYSPSQVQLIGHSLGAHVAG-EAGSRTPGLGRITGLDPVEA 181 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHH-HHHHTSTTCCEEEEESCCCT
T ss_pred HHHHHHHHHHHHHHHHhcCCChhheEEEeecHHHhhhH-HHHHhhccccceeccCCCcc
Confidence 44455666666654221 1236899999999999996 55566678999999999964
|
| >d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Human 'protective protein', HPP species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.16 E-value=0.0041 Score=56.96 Aligned_cols=60 Identities=15% Similarity=0.188 Sum_probs=49.4
Q ss_pred cceEEEEeeCCCCCCCChhHHHHHHhhCC-----------------------------CceEEEeCCCCccccccCchhH
Q 013862 174 KAQTLILCSGRDQLLPSEEEGDRLCRALP-----------------------------NCQTRRFGGGGHFLFLEDGVDL 224 (435)
Q Consensus 174 ~~Pvlii~G~~D~~~~~~~~~~~~~~~~~-----------------------------~~~~~~i~~~gH~~~~e~pe~~ 224 (435)
..+||+..|..|.+++.. ..+.+.+.+. +.+++.+.+|||+++.++|+..
T Consensus 361 ~~rVliy~Gd~D~~~~~~-gte~~i~~l~~~~~~~~~~~~~~~~~~~~~v~G~v~~~~nltf~~V~~AGHmVP~dqP~~a 439 (452)
T d1ivya_ 361 KYQILLYNGDVDMACNFM-GDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPLAA 439 (452)
T ss_dssp CCEEEEEEETTCSSSCHH-HHHHHHHHTCCCEEEEEEEEEEECTTSCEEEEEEEEEESSEEEEEETTCCSSHHHHCHHHH
T ss_pred CCEEEEEeCCcceeCCCH-HHHHHHHhcCCccccccccceecccCCCCEEEEEEEEECCeEEEEECCccccCcccCHHHH
Confidence 679999999999999987 5666655442 3456788999999999999999
Q ss_pred HHHHhhcccccc
Q 013862 225 VTTIKGAGYYRR 236 (435)
Q Consensus 225 ~~~I~~~~Fl~~ 236 (435)
.+.+.+ |+..
T Consensus 440 ~~m~~~--fi~g 449 (452)
T d1ivya_ 440 FTMFSR--FLNK 449 (452)
T ss_dssp HHHHHH--HHTT
T ss_pred HHHHHH--HHcC
Confidence 999999 8754
|
| >d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.04 E-value=0.00053 Score=59.38 Aligned_cols=58 Identities=21% Similarity=0.088 Sum_probs=45.0
Q ss_pred hHHHHHHHHHHHHHhhhc--CCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcc
Q 013862 15 FTGLLKLIERTIRSENCR--SSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATS 72 (435)
Q Consensus 15 ~~~~a~dl~~~l~~l~~~--~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~ 72 (435)
.....+.+..+|+.+... ...++++|||||+||.+|-.++...+.++.+++.++|+.+
T Consensus 123 ~~~Vg~~ia~~i~~l~~~~g~~~~~vhlIGhSLGAhiaG~ag~~l~~kigrItgLDPA~P 182 (338)
T d1bu8a2 123 TRVVGAEIAFLVQVLSTEMGYSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAEP 182 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCT
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcceeEEEeccHHHHHHHHHHHhhccccccccccccCcC
Confidence 445556666666654321 2346899999999999999999888889999999999964
|
| >d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase L1 species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.77 E-value=0.00042 Score=61.57 Aligned_cols=60 Identities=8% Similarity=-0.095 Sum_probs=45.9
Q ss_pred CCChHHHHHHHHHHHHHhhhcCC-------------------------CCCEEEEEeChhHHHHHHHHHhCC--------
Q 013862 12 GHHFTGLLKLIERTIRSENCRSS-------------------------NRPVYLVGESLGACLALAVAARNP-------- 58 (435)
Q Consensus 12 ~~s~~~~a~dl~~~l~~l~~~~~-------------------------~~~~~lvGhS~Gg~va~~~a~~~p-------- 58 (435)
-.|.++-+.+|...|+.....++ ++|++||||||||..+-.++...|
T Consensus 56 ~~S~~~RA~eL~~~I~~~~~d~G~~hs~~~~~~~~~r~y~g~~~~~~~~~kVnLIgHS~GGld~Ryl~~~l~~~~~~~~~ 135 (388)
T d1ku0a_ 56 LSSNWDRACEAYAQLVGGTVDYGAAHAAKHGHARFGRTYPGLLPELKRGGRVHIIAHSQGGQTARMLVSLLENGSQEERE 135 (388)
T ss_dssp SBCHHHHHHHHHHHHHCEEEECCHHHHHHHTSCSEEEEECCSCGGGGGTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHH
T ss_pred ccCHHHHHHHHHHHHhhhhhhhhHhHHhhhcccccCccCcccccccccCCceeEeecccccHHHHHHHHHhccccccccc
Confidence 45788888888888875432221 258999999999999988886543
Q ss_pred -----------------CceeEEEEecCCc
Q 013862 59 -----------------DMDLVLILANPAT 71 (435)
Q Consensus 59 -----------------~~v~~lVli~~~~ 71 (435)
++|++|+.++++-
T Consensus 136 ~~~~~~~~~~~l~~~~~~~V~SvTTIsTPH 165 (388)
T d1ku0a_ 136 YAKEHNVSLSPLFEGGHRFVLSVTTIATPH 165 (388)
T ss_dssp HHHHHTCCCCGGGTCCCCCEEEEEEESCCT
T ss_pred cccccccccccccccCCcceEEEEeccCCC
Confidence 3799999999774
|
| >d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Acetobacter pasteurianus [TaxId: 438]
Probab=96.62 E-value=0.0064 Score=54.29 Aligned_cols=54 Identities=15% Similarity=-0.028 Sum_probs=42.4
Q ss_pred HHHHHHHHHHhhhc--CCCCCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCcc
Q 013862 19 LKLIERTIRSENCR--SSNRPVYLVGESLGACLALAVAARNPDMDLVLILANPATS 72 (435)
Q Consensus 19 a~dl~~~l~~l~~~--~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~~ 72 (435)
++|..+.++.+... -.+.++.++|+|+||..++.+|...|+.++++|..++...
T Consensus 129 ~~D~~~~i~w~~~q~~~~~g~vg~~G~SygG~~~~~~a~~~~~~l~a~~~~~~~~d 184 (385)
T d2b9va2 129 TTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPALKVAAPESPMVD 184 (385)
T ss_dssp HHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHhccCccccceeeccccHHHHHHHHHHhccCCcceEEEEeccccc
Confidence 56777777766442 1235799999999999999999999999999998876643
|
| >d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the cellulosomal xylanase y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase y species: Clostridium thermocellum [TaxId: 1515]
Probab=96.52 E-value=0.00082 Score=56.97 Aligned_cols=36 Identities=11% Similarity=-0.045 Sum_probs=33.5
Q ss_pred CCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCCc
Q 013862 36 RPVYLVGESLGACLALAVAARNPDMDLVLILANPAT 71 (435)
Q Consensus 36 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~~ 71 (435)
+++.+.|+||||..++.+|.++|+++++++.+++..
T Consensus 144 ~~~~i~G~S~GG~~a~~~a~~~pd~f~a~~~~sg~~ 179 (273)
T d1wb4a1 144 MHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDY 179 (273)
T ss_dssp GGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCCC
T ss_pred cceEEEeeCCcchhhhhhhhcCCCcceEEEEeCccc
Confidence 479999999999999999999999999999998774
|
| >d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin hydrolase IroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: IroE-like domain: Enterobactin and salmochelin hydrolase IroE species: Escherichia coli [TaxId: 562]
Probab=96.49 E-value=0.0026 Score=53.54 Aligned_cols=34 Identities=21% Similarity=0.128 Sum_probs=26.5
Q ss_pred CCEEEEEeChhHHHHHHHHHhCCCceeEEEEecCC
Q 013862 36 RPVYLVGESLGACLALAVAARNPDMDLVLILANPA 70 (435)
Q Consensus 36 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~lVli~~~ 70 (435)
.+..++|||+||..++.++.+ ++.+.+++..+|.
T Consensus 141 ~~~~i~G~S~GG~~a~~~~~~-~~~f~~~~a~s~~ 174 (265)
T d2gzsa1 141 QRRGLWGHSYGGLFVLDSWLS-SSYFRSYYSASPS 174 (265)
T ss_dssp EEEEEEEETHHHHHHHHHHHH-CSSCSEEEEESGG
T ss_pred CceEEEeccHHHHHHHHHHHc-CcccCEEEEECCc
Confidence 458899999999999986654 5677777776655
|
| >d1uwca_ c.69.1.17 (A:) Feruloyl esterase A {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Feruloyl esterase A species: Aspergillus niger [TaxId: 5061]
Probab=96.37 E-value=0.0022 Score=53.68 Aligned_cols=42 Identities=21% Similarity=0.390 Sum_probs=33.4
Q ss_pred hHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHh
Q 013862 15 FTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAAR 56 (435)
Q Consensus 15 ~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~ 56 (435)
+..+.+++.+.++.+...+++.++++.|||+||.+|..+|..
T Consensus 104 ~~~i~~~i~~~i~~~~~~~~~~~i~vTGHSLGGAlA~L~a~~ 145 (261)
T d1uwca_ 104 WISVQDQVESLVKQQASQYPDYALTVTGHSLGASMAALTAAQ 145 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCcceEEeccchhHHHHHHHHHH
Confidence 455566777777777666777899999999999999987754
|
| >d1lgya_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizopus niveus [TaxId: 4844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizopus niveus [TaxId: 4844]
Probab=96.36 E-value=0.0024 Score=53.67 Aligned_cols=43 Identities=16% Similarity=0.218 Sum_probs=32.9
Q ss_pred ChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHh
Q 013862 14 HFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAAR 56 (435)
Q Consensus 14 s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~ 56 (435)
.+....+++...++.+...+++.++++.|||+||.+|..+|..
T Consensus 111 ~~~~~~~~i~~~v~~~~~~~~~~~i~vtGHSLGGAlA~L~a~~ 153 (265)
T d1lgya_ 111 SYEQVVNDYFPVVQEQLTAHPTYKVIVTGHSLGGAQALLAGMD 153 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhCCCceEEEEecccchHHHHHHHHH
Confidence 3455666666767666666677799999999999999888754
|
| >d1tiaa_ c.69.1.17 (A:) Triacylglycerol lipase {Penicillium camembertii [TaxId: 5075]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Penicillium camembertii [TaxId: 5075]
Probab=96.33 E-value=0.002 Score=54.27 Aligned_cols=42 Identities=24% Similarity=0.309 Sum_probs=33.6
Q ss_pred hHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHh
Q 013862 15 FTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAAR 56 (435)
Q Consensus 15 ~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~ 56 (435)
++.+.+++.+.++.+...+++.++++.|||+||.+|..+|..
T Consensus 116 ~~~~~~~i~~~i~~~~~~~~~~~i~iTGHSLGGAlA~L~a~~ 157 (271)
T d1tiaa_ 116 WKLVRDDIIKELKEVVAQNPNYELVVVGHSLGAAVATLAATD 157 (271)
T ss_pred HHHHHHHHHHHHHHHHHhCCCceEEEeccchHHHHHHHHHHH
Confidence 555666777777777666677899999999999999988765
|
| >d1tiba_ c.69.1.17 (A:) Triacylglycerol lipase {Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]
Probab=96.28 E-value=0.0027 Score=53.44 Aligned_cols=43 Identities=19% Similarity=0.297 Sum_probs=34.0
Q ss_pred hHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhC
Q 013862 15 FTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARN 57 (435)
Q Consensus 15 ~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~ 57 (435)
+....+++.+.++.+...+++.++++.|||+||.+|..++...
T Consensus 117 ~~~~~~~v~~~v~~~~~~~~~~~i~vtGHSLGGalA~l~a~~l 159 (269)
T d1tiba_ 117 WRSVADTLRQKVEDAVREHPDYRVVFTGHSLGGALATVAGADL 159 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCcceeeeccchHHHHHHHHHHHH
Confidence 4555667777777766667777999999999999999888753
|
| >d3tgla_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizomucor miehei [TaxId: 4839]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizomucor miehei [TaxId: 4839]
Probab=96.16 E-value=0.0034 Score=52.71 Aligned_cols=42 Identities=19% Similarity=0.210 Sum_probs=31.5
Q ss_pred hHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHh
Q 013862 15 FTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAAR 56 (435)
Q Consensus 15 ~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~ 56 (435)
+..+.+++...+..+...+++.++++.|||+||.+|..+|..
T Consensus 111 ~~~v~~~i~~~i~~~~~~~~~~~i~vtGHSLGGAlA~L~a~~ 152 (265)
T d3tgla_ 111 YGEVQNELVATVLDQFKQYPSYKVAVTGHSLGGATVLLCALD 152 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCceEEEecccchHHHHHHHHHH
Confidence 455555666666665555667799999999999999987754
|
| >d1pv1a_ c.69.1.34 (A:) Hypothetical esterase YJL068C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical esterase YJL068C domain: Hypothetical esterase YJL068C species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.61 E-value=0.012 Score=50.29 Aligned_cols=58 Identities=16% Similarity=0.149 Sum_probs=41.3
Q ss_pred ChHH-HHHHHHHHHHHhhhcCCC------CCEEEEEeChhHHHHHHHHHh--CCCceeEEEEecCCc
Q 013862 14 HFTG-LLKLIERTIRSENCRSSN------RPVYLVGESLGACLALAVAAR--NPDMDLVLILANPAT 71 (435)
Q Consensus 14 s~~~-~a~dl~~~l~~l~~~~~~------~~~~lvGhS~Gg~va~~~a~~--~p~~v~~lVli~~~~ 71 (435)
.+++ +++++...|++.-....+ +...|.||||||.-|+.+|.+ +|++..++...++..
T Consensus 124 ~~~~~i~~EL~p~i~~~~~~~~~r~~~~~~~~~I~G~SmGG~gAl~~al~~~~p~~f~~~~s~s~~~ 190 (299)
T d1pv1a_ 124 QMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGHSMGGYGAICGYLKGYSGKRYKSCSAFAPIV 190 (299)
T ss_dssp BHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEETHHHHHHHHHHHHTGGGTCCSEEEEESCCC
T ss_pred chHHHHHHHHHHHHHHhCCcccccccccccceEEEeecccHHHHHHHHHHhcCCCceEEEeeccCcC
Confidence 3444 456777777764221111 368899999999999999987 489999988888764
|
| >d1cexa_ c.69.1.30 (A:) Cutinase {Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Cutinase species: Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]
Probab=94.47 E-value=0.089 Score=41.34 Aligned_cols=57 Identities=18% Similarity=0.105 Sum_probs=46.6
Q ss_pred ChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhCC----CceeEEEEecCC
Q 013862 14 HFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARNP----DMDLVLILANPA 70 (435)
Q Consensus 14 s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~p----~~v~~lVli~~~ 70 (435)
|...=+.++...+.......|+.+++|+|+|-|+.++-..+...+ ++|.++++++-+
T Consensus 74 s~~~G~~~~~~~i~~~a~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGDP 134 (197)
T d1cexa_ 74 TSSAAIREMLGLFQQANTKCPDATLIAGGYSQGAALAAASIEDLDSAIRDKIAGTVLFGYT 134 (197)
T ss_dssp SCHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHSCHHHHTTEEEEEEESCT
T ss_pred chhHHHHHHHHHHHHHHhhCCCCeEEEeeeccccHhhhcccccCChhhhhhEEEEEEEeCC
Confidence 455667777788888777788889999999999999998887653 589999998754
|
| >d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]
Probab=93.59 E-value=0.032 Score=51.13 Aligned_cols=61 Identities=8% Similarity=0.036 Sum_probs=50.1
Q ss_pred cceEEEEeeCCCCCCCChhHHHHHHhhCC-------------------------------------CceEEEeCCCCccc
Q 013862 174 KAQTLILCSGRDQLLPSEEEGDRLCRALP-------------------------------------NCQTRRFGGGGHFL 216 (435)
Q Consensus 174 ~~Pvlii~G~~D~~~~~~~~~~~~~~~~~-------------------------------------~~~~~~i~~~gH~~ 216 (435)
.++||+..|+.|.+++.. ..+.+.+.++ +.+++.+.+|||++
T Consensus 372 girVLIy~Gd~D~icn~~-Gte~~i~~L~w~g~~~f~~~~~~~~w~~~~~~~~~~~~vaG~~~~~~nltf~~V~~AGHmv 450 (483)
T d1ac5a_ 372 GIEIVLFNGDKDLICNNK-GVLDTIDNLKWGGIKGFSDDAVSFDWIHKSKSTDDSEEFSGYVKYDRNLTFVSVYNASHMV 450 (483)
T ss_dssp TCEEEEEEETTCSTTCHH-HHHHHHHHCEETTEESSCTTCEEEEEEECSSTTCCCCSCCEEEEEETTEEEEEETTCCSSH
T ss_pred CCEEEEEECChhhcCCCH-HHHHHHHhCCCccccccccCccccccccccccccCCcEEEEEEEEeCCeEEEEECCccccC
Confidence 579999999999999987 4555554321 35788899999999
Q ss_pred cccCchhHHHHHhhccccccc
Q 013862 217 FLEDGVDLVTTIKGAGYYRRG 237 (435)
Q Consensus 217 ~~e~pe~~~~~I~~~~Fl~~~ 237 (435)
+.++|++..+.|.. |+...
T Consensus 451 P~dqP~~a~~mi~~--fl~~~ 469 (483)
T d1ac5a_ 451 PFDKSLVSRGIVDI--YSNDV 469 (483)
T ss_dssp HHHCHHHHHHHHHH--HTTCC
T ss_pred cccCHHHHHHHHHH--HhCCc
Confidence 99999999999999 88654
|
| >d1qoza_ c.69.1.30 (A:) Acetylxylan esterase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Trichoderma reesei [TaxId: 51453]
Probab=91.39 E-value=0.14 Score=40.59 Aligned_cols=56 Identities=14% Similarity=0.049 Sum_probs=43.0
Q ss_pred hHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhC------------------CCceeEEEEecCC
Q 013862 15 FTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARN------------------PDMDLVLILANPA 70 (435)
Q Consensus 15 ~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~------------------p~~v~~lVli~~~ 70 (435)
..+=+.++...+.....+.|+.+++|+|+|-|+.++...+... .++|.++++++-+
T Consensus 61 ~~~G~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~l~~~g~~~~~~~~~~~~l~~~~~~~V~avvl~GdP 134 (207)
T d1qoza_ 61 VVNGTNAAAAAINNFHNSCPDTQLVLVGYSQGAQIFDNALCGGGDPGEGITNTAVPLTAGAVSAVKAAIFMGDP 134 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESCT
T ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEEEeeccchHHHHHHHhccCccccccccCCCCCChhhhhcEEEEEEEeCC
Confidence 4455667777888777778888999999999999998876531 1368888888644
|
| >d1g66a_ c.69.1.30 (A:) Acetylxylan esterase {Penicillium purpurogenum [TaxId: 28575]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Penicillium purpurogenum [TaxId: 28575]
Probab=90.84 E-value=0.17 Score=40.12 Aligned_cols=58 Identities=16% Similarity=0.150 Sum_probs=44.1
Q ss_pred ChHHHHHHHHHHHHHhhhcCCCCCEEEEEeChhHHHHHHHHHhC------------------CCceeEEEEecCCc
Q 013862 14 HFTGLLKLIERTIRSENCRSSNRPVYLVGESLGACLALAVAARN------------------PDMDLVLILANPAT 71 (435)
Q Consensus 14 s~~~~a~dl~~~l~~l~~~~~~~~~~lvGhS~Gg~va~~~a~~~------------------p~~v~~lVli~~~~ 71 (435)
|..+=+..+...|.......|+.+++|+|+|-|+.++..++... .++|.++++.+-+.
T Consensus 60 Sv~~G~~~~~~~i~~~~~~CP~tk~vl~GYSQGA~V~~~~l~~~g~~~~~~~~~~~~l~~~~~~~v~avvl~GdP~ 135 (207)
T d1g66a_ 60 SVAQGIAAVASAVNSFNSQCPSTKIVLVGYSQGGEIMDVALCGGGDPNQGYTNTAVQLSSSAVNMVKAAIFMGDPM 135 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTTCEEEEEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESCTT
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCcEEEEeeccccHHHHHHHhccCCccccccccccCCCchhhhceeeEEEecCCC
Confidence 45555677888888887778888999999999999998876431 13688888877553
|