Citrus Sinensis ID: 013875

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430----
MLKRSKSKARKWVCHRTCQMHTQSTGSQGPSFHVLRNVRKLSKLLEKTSSLGIDIIYSNLLKNSFGFLALNPTYIINSAPFYLDTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGPGPDQSVLPPPTDLPPC
cccccccccccEEEEEEEEEEccccccccccccccccccEEEEEEcccccccHHHHHHHHHHcccccccccccccccccccccccEEEEEEcccEEEEEEEEEcccccEEEEEcccEEEEEEEcccccccEEEcEEEEcccccEEEEEEEcccccccEEEEEEccccccccccccEEEEEEccccccccccccccccccccHHHHHHHHccccccccccccccccccccEEEEEEEEEEcccccccccccEEEEEEcccccccccccHHHHHHccccccccccccccccccccccccccccccccccccEEEEcccccEEEEEEEEcccccccccccccccccEEEEEEcccccccccccccccccccccccEEEcccccEEEEEEEccccEEcHHHHccHHHHHHccEEEEEEEccccccccccccccccccc
cccccHHHHHHHHHHcccccccccccccccccccccccccEEEEEEccccccHHHHHHHHHHccccccccccEEEEcccccccccEEEEccccHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEEEEccccEEEEEEcccccEEEEEEcccccccEEEEEEEcccccccccccEEEEEEEEcccccccccccccccccccHHHHHHHHHHHHHHcccccccccccccccEEEEEEEcccccccccccccEEEEEEcccEEccccHHHHHHHHccccccccccccccccccEcccccccccccccccccEEEEEEcccEEEEEEEccccccccccEEEEccccEEEEEcccccccHHHHHHHcccccccEEcEEEEcccEEEEEEEEccccEEEEEEEccHHHHHcccEEEEEEEccccccccccccccccccc
mlkrskskarkwVCHRtcqmhtqstgsqgpsfhVLRNVRKLSKLLEKTSSLGIDIIYSnllknsfgflalnptyiinsapfylDTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDavytkpftteailiapgqttNVLVQAnqkpgryfmaarpfndapipvdnktatgilqykgipnsllptlaqlpasndseFALNYNKklrslnspkfpadvpqkvdrKLFYtigfgkdscptcvngtRLLATLNNISFVMPQTALLQAHYFNLkgvfkadfpdkppkpfnytgapltaslgtsratrlskiaFNSTIELVLQdtnlltveshpfhlhgyNFFVVGtgignfdpvkypanynlvdpierntaavptggwtairfradnpgvwfmhchlelhtgwglktafavedgpgpdqsvlppptdlppc
mlkrskskarkwVCHRTCQmhtqstgsqgpsfhVLRNVRKLSKLLEKTSSLGIDIIYSNLLKNSFGFLALNPTYIINSAPFYLDTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEailiapgqttNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKlrslnspkfpadvpqkvDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGPgpdqsvlppptdlppc
MLKRSKSKARKWVCHRTCQMHTQSTGSQGPSFHVLRNVRklskllektsslGIDIIYSNLLKNSFGFLALNPTYIINSAPFYLDTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKAdfpdkppkpfNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGPGPDQSVLPPPTDLPPC
***********WVCHRTCQM***********FHVLRNVRKLSKLLEKTSSLGIDIIYSNLLKNSFGFLALNPTYIINSAPFYLDTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQL*******FALNY***************VPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPD****PFNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAV********************
*************CHRTCQMHTQSTGSQGPSFHVLRNVRKLSKLLEKTSSLGIDIIYSNLLKNSFGFLALNPTYIINSAPFYLDTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNS*LPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGPGP**SVLPPPTDLPPC
*************CHRTCQMHTQSTGSQGPSFHVLRNVRKLSKLLEKTSSLGIDIIYSNLLKNSFGFLALNPTYIINSAPFYLDTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGPGPDQSVLPPPTDLPPC
*****KSKARKWVCHRTCQMHTQSTGSQGPSFHVLRNVRKLSKLLEKTSSLGIDIIYSNLLKNSFGFLALNPTYIINSAPFYLDTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGPGPDQSVLPPPTDLPPC
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MLKRSKSKARKWVCHRTCQMHTQSTGSQGPSFHVLRNVRKLSKLLEKTSSLGIDIIYSNLLKNSFGFLALNPTYIINSAPFYLDTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGPGPDQSVLPPPTDLPPC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query434 2.2.26 [Sep-21-2011]
Q8VZA1557 Laccase-11 OS=Arabidopsis yes no 0.806 0.628 0.748 1e-155
Q8RYM9562 Laccase-2 OS=Oryza sativa yes no 0.806 0.622 0.723 1e-155
O80434558 Laccase-4 OS=Arabidopsis no no 0.801 0.623 0.595 1e-125
Q0IQU1564 Laccase-22 OS=Oryza sativ yes no 0.806 0.620 0.569 1e-124
Q1PDH6566 Laccase-16 OS=Arabidopsis no no 0.808 0.620 0.574 1e-120
Q6ID18558 Laccase-10 OS=Arabidopsis no no 0.829 0.645 0.556 1e-117
Q9FJD5577 Laccase-17 OS=Arabidopsis no no 0.829 0.623 0.547 1e-110
Q5N9X2579 Laccase-4 OS=Oryza sativa no no 0.797 0.597 0.538 1e-108
Q10ND7578 Laccase-10 OS=Oryza sativ no no 0.824 0.619 0.529 1e-108
Q9LMS3581 Laccase-1 OS=Arabidopsis no no 0.877 0.655 0.481 1e-104
>sp|Q8VZA1|LAC11_ARATH Laccase-11 OS=Arabidopsis thaliana GN=LAC11 PE=2 SV=1 Back     alignment and function desciption
 Score =  549 bits (1414), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 262/350 (74%), Positives = 300/350 (85%)

Query: 85  TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTT 144
           TF +E E+GKTYLLRIINAALNDELFF IAGHN TVVE+DAVYTKPFTT+AIL+ PGQTT
Sbjct: 208 TFVIEAEAGKTYLLRIINAALNDELFFGIAGHNMTVVEIDAVYTKPFTTKAILLGPGQTT 267

Query: 145 NVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEF 204
           NVLV+ ++ P RYFMAA PF DAP+ VDNKT T ILQYKG+PN++LP L +LP  ND+ F
Sbjct: 268 NVLVKTDRSPNRYFMAASPFMDAPVSVDNKTVTAILQYKGVPNTVLPILPKLPLPNDTSF 327

Query: 205 ALNYNKKLRSLNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMP 264
           AL+YN KL+SLN+P FPA VP KVDR+LFYTIG G ++CPTCVNGT L A++NNI+F+MP
Sbjct: 328 ALDYNGKLKSLNTPNFPALVPLKVDRRLFYTIGLGINACPTCVNGTNLAASINNITFIMP 387

Query: 265 QTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLGTSRATRLSKIAFNSTIELVL 324
           +TALL+AHY N+ GVF+ DFPD+PPK FNYTG PLTA+LGTS  TRLS++ FN+TIELVL
Sbjct: 388 KTALLKAHYSNISGVFRTDFPDRPPKAFNYTGVPLTANLGTSTGTRLSRVKFNTTIELVL 447

Query: 325 QDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAI 384
           QDTNLLTVESHPFHLHGYNFFVVGTG+GNFDP K PA +NLVDP ERNT  VPTGGW AI
Sbjct: 448 QDTNLLTVESHPFHLHGYNFFVVGTGVGNFDPKKDPAKFNLVDPPERNTVGVPTGGWAAI 507

Query: 385 RFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGPGPDQSVLPPPTDLPPC 434
           RFRADNPGVWFMHCHLE+HT WGLK AF VE+G  P+ SVLPPP D P C
Sbjct: 508 RFRADNPGVWFMHCHLEVHTMWGLKMAFVVENGETPELSVLPPPKDYPSC 557
Lignin degradation and detoxification of lignin-derived products.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 0EC: .EC: 3EC: .EC: 2
>sp|Q8RYM9|LAC2_ORYSJ Laccase-2 OS=Oryza sativa subsp. japonica GN=LAC2 PE=2 SV=1 Back     alignment and function description
>sp|O80434|LAC4_ARATH Laccase-4 OS=Arabidopsis thaliana GN=IRX12 PE=2 SV=2 Back     alignment and function description
>sp|Q0IQU1|LAC22_ORYSJ Laccase-22 OS=Oryza sativa subsp. japonica GN=LAC22 PE=2 SV=2 Back     alignment and function description
>sp|Q1PDH6|LAC16_ARATH Laccase-16 OS=Arabidopsis thaliana GN=LAC16 PE=2 SV=2 Back     alignment and function description
>sp|Q6ID18|LAC10_ARATH Laccase-10 OS=Arabidopsis thaliana GN=LAC10 PE=2 SV=1 Back     alignment and function description
>sp|Q9FJD5|LAC17_ARATH Laccase-17 OS=Arabidopsis thaliana GN=LAC17 PE=2 SV=1 Back     alignment and function description
>sp|Q5N9X2|LAC4_ORYSJ Laccase-4 OS=Oryza sativa subsp. japonica GN=LAC4 PE=2 SV=1 Back     alignment and function description
>sp|Q10ND7|LAC10_ORYSJ Laccase-10 OS=Oryza sativa subsp. japonica GN=LAC10 PE=2 SV=1 Back     alignment and function description
>sp|Q9LMS3|LAC1_ARATH Laccase-1 OS=Arabidopsis thaliana GN=LAC1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query434
224094809 562 predicted protein [Populus trichocarpa] 0.806 0.622 0.851 1e-178
449457640 563 PREDICTED: laccase-11-like [Cucumis sati 0.806 0.621 0.837 1e-176
449500032 563 PREDICTED: laccase-11-like [Cucumis sati 0.806 0.621 0.834 1e-176
356496745 561 PREDICTED: laccase-11-like [Glycine max] 0.806 0.623 0.837 1e-175
356540767 564 PREDICTED: laccase-11-like [Glycine max] 0.806 0.620 0.828 1e-173
297735138 542 unnamed protein product [Vitis vinifera] 0.806 0.645 0.822 1e-172
356495402 564 PREDICTED: laccase-11-like [Glycine max] 0.806 0.620 0.828 1e-172
356538202 555 PREDICTED: laccase-11-like [Glycine max] 0.806 0.630 0.825 1e-172
225430724 563 PREDICTED: laccase-11 [Vitis vinifera] 0.806 0.621 0.822 1e-172
357483501 576 Laccase-11 [Medicago truncatula] gi|3555 0.806 0.607 0.82 1e-170
>gi|224094809|ref|XP_002310245.1| predicted protein [Populus trichocarpa] gi|222853148|gb|EEE90695.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  629 bits (1622), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 298/350 (85%), Positives = 317/350 (90%)

Query: 85  TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTT 144
           TFAME+ESGKTYLLRIINAALNDELFF IAGHN TVVEVDAVYTKPFTT+ ILIAPGQTT
Sbjct: 213 TFAMEIESGKTYLLRIINAALNDELFFGIAGHNMTVVEVDAVYTKPFTTQTILIAPGQTT 272

Query: 145 NVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEF 204
           NVLV ANQ PGRYFMA R F D P+PVDNKTAT I+QYKGIPN+ LP+  QLPASND+EF
Sbjct: 273 NVLVLANQVPGRYFMATRAFLDVPLPVDNKTATAIMQYKGIPNTDLPSFPQLPASNDTEF 332

Query: 205 ALNYNKKLRSLNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMP 264
           AL YN+KLRSLN+ +FPA+VP KVDR LFYT+GFGKDSCPTCVNGTRLLA+LNNISFVMP
Sbjct: 333 ALGYNRKLRSLNTAQFPANVPLKVDRNLFYTVGFGKDSCPTCVNGTRLLASLNNISFVMP 392

Query: 265 QTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLGTSRATRLSKIAFNSTIELVL 324
           Q  LLQAHYFN+ GVFK +FPDKPP PFNYTGAPLTASLGT   TRLSKIAFNST+ELVL
Sbjct: 393 QIGLLQAHYFNISGVFKTNFPDKPPTPFNYTGAPLTASLGTVHGTRLSKIAFNSTVELVL 452

Query: 325 QDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAI 384
           QDTNLLTVESHPFHLHGYNFFVVGTGIGNFDP K PA YNLVDP+ERNT  VPTGGWTAI
Sbjct: 453 QDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPAKDPAKYNLVDPVERNTVGVPTGGWTAI 512

Query: 385 RFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGPGPDQSVLPPPTDLPPC 434
           RFRADNPGVWFMHCHLELHTGWGLKTAF VE+GPG DQS+LPPP DLPPC
Sbjct: 513 RFRADNPGVWFMHCHLELHTGWGLKTAFVVEEGPGSDQSILPPPKDLPPC 562

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|449457640|ref|XP_004146556.1| PREDICTED: laccase-11-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449500032|ref|XP_004160985.1| PREDICTED: laccase-11-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356496745|ref|XP_003517226.1| PREDICTED: laccase-11-like [Glycine max] Back     alignment and taxonomy information
>gi|356540767|ref|XP_003538856.1| PREDICTED: laccase-11-like [Glycine max] Back     alignment and taxonomy information
>gi|297735138|emb|CBI17500.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356495402|ref|XP_003516567.1| PREDICTED: laccase-11-like [Glycine max] Back     alignment and taxonomy information
>gi|356538202|ref|XP_003537593.1| PREDICTED: laccase-11-like [Glycine max] Back     alignment and taxonomy information
>gi|225430724|ref|XP_002266464.1| PREDICTED: laccase-11 [Vitis vinifera] Back     alignment and taxonomy information
>gi|357483501|ref|XP_003612037.1| Laccase-11 [Medicago truncatula] gi|355513372|gb|AES94995.1| Laccase-11 [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query434
TAIR|locus:2143563557 LAC11 "laccase 11" [Arabidopsi 0.806 0.628 0.725 4.8e-142
TAIR|locus:2042842558 IRX12 "IRREGULAR XYLEM 12" [Ar 0.799 0.621 0.582 1.2e-113
TAIR|locus:2154518566 LAC16 "laccase 16" [Arabidopsi 0.822 0.630 0.554 1.3e-107
TAIR|locus:2150139558 LAC10 "laccase 10" [Arabidopsi 0.838 0.652 0.534 1.1e-105
TAIR|locus:2066117573 LAC2 "laccase 2" [Arabidopsis 0.806 0.610 0.494 5.5e-93
TAIR|locus:2060879570 LAC3 "laccase 3" [Arabidopsis 0.797 0.607 0.482 2.8e-89
TAIR|locus:2153469565 LAC12 "laccase 12" [Arabidopsi 0.831 0.638 0.460 2.3e-87
TAIR|locus:2182895569 LAC13 "laccase 13" [Arabidopsi 0.799 0.609 0.457 1.7e-82
TAIR|locus:2184802569 LAC14 "laccase 14" [Arabidopsi 0.829 0.632 0.437 7.6e-80
TAIR|locus:2150039584 LAC8 "laccase 8" [Arabidopsis 0.804 0.597 0.417 3.1e-76
TAIR|locus:2143563 LAC11 "laccase 11" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1389 (494.0 bits), Expect = 4.8e-142, P = 4.8e-142
 Identities = 254/350 (72%), Positives = 291/350 (83%)

Query:    85 TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTT 144
             TF +E E+GKTYLLRIINAALNDELFF IAGHN TVVE+DAVYTKPFTT+AIL+ PGQTT
Sbjct:   208 TFVIEAEAGKTYLLRIINAALNDELFFGIAGHNMTVVEIDAVYTKPFTTKAILLGPGQTT 267

Query:   145 NVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEF 204
             NVLV+ ++ P RYFMAA PF DAP+ VDNKT T ILQYKG+PN++LP L +LP  ND+ F
Sbjct:   268 NVLVKTDRSPNRYFMAASPFMDAPVSVDNKTVTAILQYKGVPNTVLPILPKLPLPNDTSF 327

Query:   205 ALNYNKKLRSLNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMP 264
             AL+YN KL+SLN+P FPA VP KVDR+LFYTIG G ++CPTCVNGT L A++NNI+F+MP
Sbjct:   328 ALDYNGKLKSLNTPNFPALVPLKVDRRLFYTIGLGINACPTCVNGTNLAASINNITFIMP 387

Query:   265 QTALLQAHYFNLKGVFKAXXXXXXXXXXNYTGAPLTASLGTSRATRLSKIAFNSTIELVL 324
             +TALL+AHY N+ GVF+           NYTG PLTA+LGTS  TRLS++ FN+TIELVL
Sbjct:   388 KTALLKAHYSNISGVFRTDFPDRPPKAFNYTGVPLTANLGTSTGTRLSRVKFNTTIELVL 447

Query:   325 QDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAI 384
             QDTNLLTVESHPFHLHGYNFFVVGTG+GNFDP K PA +NLVDP ERNT  VPTGGW AI
Sbjct:   448 QDTNLLTVESHPFHLHGYNFFVVGTGVGNFDPKKDPAKFNLVDPPERNTVGVPTGGWAAI 507

Query:   385 RFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGPGPDQSVLPPPTDLPPC 434
             RFRADNPGVWFMHCHLE+HT WGLK AF VE+G  P+ SVLPPP D P C
Sbjct:   508 RFRADNPGVWFMHCHLEVHTMWGLKMAFVVENGETPELSVLPPPKDYPSC 557
GO:0005507 "copper ion binding" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0046274 "lignin catabolic process" evidence=IEA
GO:0048046 "apoplast" evidence=IEA
GO:0052716 "hydroquinone:oxygen oxidoreductase activity" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0010413 "glucuronoxylan metabolic process" evidence=RCA
GO:0045492 "xylan biosynthetic process" evidence=RCA
TAIR|locus:2042842 IRX12 "IRREGULAR XYLEM 12" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2154518 LAC16 "laccase 16" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2150139 LAC10 "laccase 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2066117 LAC2 "laccase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2060879 LAC3 "laccase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2153469 LAC12 "laccase 12" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2182895 LAC13 "laccase 13" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2184802 LAC14 "laccase 14" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2150039 LAC8 "laccase 8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8VZA1LAC11_ARATH1, ., 1, 0, ., 3, ., 20.74850.80640.6283yesno
Q0IQU1LAC22_ORYSJ1, ., 1, 0, ., 3, ., 20.56940.80640.6205yesno
Q8RYM9LAC2_ORYSJ1, ., 1, 0, ., 3, ., 20.72360.80640.6227yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.10.30.921
3rd Layer1.10.3.20.914

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query434
TIGR03389539 TIGR03389, laccase, laccase, plant 0.0
TIGR03388541 TIGR03388, ascorbase, L-ascorbate oxidase, plant t 1e-65
PLN02604566 PLN02604, PLN02604, oxidoreductase 7e-59
PLN02191574 PLN02191, PLN02191, L-ascorbate oxidase 3e-45
pfam07731135 pfam07731, Cu-oxidase_2, Multicopper oxidase 1e-43
pfam00394146 pfam00394, Cu-oxidase, Multicopper oxidase 6e-40
TIGR03390538 TIGR03390, ascorbOXfungal, L-ascorbate oxidase, fu 4e-32
PLN02835539 PLN02835, PLN02835, oxidoreductase 5e-29
PLN00044596 PLN00044, PLN00044, multi-copper oxidase-related p 2e-28
PLN02354552 PLN02354, PLN02354, copper ion binding / oxidoredu 4e-28
PLN02168545 PLN02168, PLN02168, copper ion binding / pectinest 4e-28
PLN02792536 PLN02792, PLN02792, oxidoreductase 2e-25
PLN02991543 PLN02991, PLN02991, oxidoreductase 1e-22
COG2132451 COG2132, SufI, Putative multicopper oxidases [Seco 3e-10
TIGR01480587 TIGR01480, copper_res_A, copper-resistance protein 6e-08
TIGR01480587 TIGR01480, copper_res_A, copper-resistance protein 4e-04
>gnl|CDD|234194 TIGR03389, laccase, laccase, plant Back     alignment and domain information 
 Score =  599 bits (1547), Expect = 0.0
 Identities = 246/371 (66%), Positives = 281/371 (75%), Gaps = 10/371 (2%)

Query: 74  YIINSAPFYL------DTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVY 127
           Y IN  P  L      DTF + VE GKTYLLRIINAALNDELFFAIA H  TVVEVDA Y
Sbjct: 169 YTINGHPGPLYNCSSKDTFKLTVEPGKTYLLRIINAALNDELFFAIANHTLTVVEVDATY 228

Query: 128 TKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPN 187
           TKPF T+ I+I PGQTTNVL+ A+Q PGRYFMAARP+ DAP   DN T T ILQYKG  N
Sbjct: 229 TKPFKTKTIVIGPGQTTNVLLTADQSPGRYFMAARPYMDAPGAFDNTTTTAILQYKGTSN 288

Query: 188 SLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADVPQKVDRKLFYTIGFGKDSCP--T 245
           S  P L  LPA ND+  A N++ KLRSLNS ++PA+VP  +DR+LF+TIG G D CP  T
Sbjct: 289 SAKPILPTLPAYNDTAAATNFSNKLRSLNSAQYPANVPVTIDRRLFFTIGLGLDPCPNNT 348

Query: 246 CV--NGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASL 303
           C   NGTR  A++NNISFVMP TALLQAHYF + GVF  DFP  PP  FNYTG  L  +L
Sbjct: 349 CQGPNGTRFAASMNNISFVMPTTALLQAHYFGISGVFTTDFPANPPTKFNYTGTNLPNNL 408

Query: 304 GTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANY 363
            T+  T++ ++ FNST+ELVLQDT++L  E+HP HLHGYNFFVVGTG GNFDP K PA +
Sbjct: 409 FTTNGTKVVRLKFNSTVELVLQDTSILGSENHPIHLHGYNFFVVGTGFGNFDPKKDPAKF 468

Query: 364 NLVDPIERNTAAVPTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGPGPDQS 423
           NLVDP ERNT  VPTGGW AIRF ADNPGVWFMHCHLE+HT WGLK AF V++G GP+QS
Sbjct: 469 NLVDPPERNTVGVPTGGWAAIRFVADNPGVWFMHCHLEVHTTWGLKMAFLVDNGKGPNQS 528

Query: 424 VLPPPTDLPPC 434
           +LPPP+DLP C
Sbjct: 529 LLPPPSDLPSC 539

Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. Length = 539
>gnl|CDD|234193 TIGR03388, ascorbase, L-ascorbate oxidase, plant type Back     alignment and domain information
>gnl|CDD|215324 PLN02604, PLN02604, oxidoreductase Back     alignment and domain information
>gnl|CDD|177843 PLN02191, PLN02191, L-ascorbate oxidase Back     alignment and domain information
>gnl|CDD|219541 pfam07731, Cu-oxidase_2, Multicopper oxidase Back     alignment and domain information
>gnl|CDD|215896 pfam00394, Cu-oxidase, Multicopper oxidase Back     alignment and domain information
>gnl|CDD|132431 TIGR03390, ascorbOXfungal, L-ascorbate oxidase, fungal type Back     alignment and domain information
>gnl|CDD|178429 PLN02835, PLN02835, oxidoreductase Back     alignment and domain information
>gnl|CDD|165622 PLN00044, PLN00044, multi-copper oxidase-related protein; Provisional Back     alignment and domain information
>gnl|CDD|177987 PLN02354, PLN02354, copper ion binding / oxidoreductase Back     alignment and domain information
>gnl|CDD|215113 PLN02168, PLN02168, copper ion binding / pectinesterase Back     alignment and domain information
>gnl|CDD|178389 PLN02792, PLN02792, oxidoreductase Back     alignment and domain information
>gnl|CDD|215536 PLN02991, PLN02991, oxidoreductase Back     alignment and domain information
>gnl|CDD|225043 COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|233432 TIGR01480, copper_res_A, copper-resistance protein, CopA family Back     alignment and domain information
>gnl|CDD|233432 TIGR01480, copper_res_A, copper-resistance protein, CopA family Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 434
TIGR03389539 laccase laccase, plant. Members of this protein fa 100.0
PLN02792536 oxidoreductase 100.0
PLN00044596 multi-copper oxidase-related protein; Provisional 100.0
PLN02991543 oxidoreductase 100.0
PLN02835539 oxidoreductase 100.0
PLN02354552 copper ion binding / oxidoreductase 100.0
PLN02168545 copper ion binding / pectinesterase 100.0
TIGR03388541 ascorbase L-ascorbate oxidase, plant type. Members 100.0
PLN02604566 oxidoreductase 100.0
KOG1263563 consensus Multicopper oxidases [Secondary metaboli 100.0
PLN02191574 L-ascorbate oxidase 100.0
TIGR03390538 ascorbOXfungal L-ascorbate oxidase, fungal type. T 100.0
TIGR01480587 copper_res_A copper-resistance protein, CopA famil 100.0
PRK10965523 multicopper oxidase; Provisional 100.0
PRK10883471 FtsI repressor; Provisional 100.0
COG2132451 SufI Putative multicopper oxidases [Secondary meta 100.0
PF07731138 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR01 99.97
TIGR02376311 Cu_nitrite_red nitrite reductase, copper-containin 99.94
PF00394159 Cu-oxidase: Multicopper oxidase; InterPro: IPR0011 99.93
TIGR02376311 Cu_nitrite_red nitrite reductase, copper-containin 99.64
PLN02604 566 oxidoreductase 99.16
TIGR03389 539 laccase laccase, plant. Members of this protein fa 99.02
PF07732117 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR01 98.92
PLN02835 539 oxidoreductase 98.9
PLN02354 552 copper ion binding / oxidoreductase 98.79
TIGR03388 541 ascorbase L-ascorbate oxidase, plant type. Members 98.78
PLN02792 536 oxidoreductase 98.7
TIGR03390 538 ascorbOXfungal L-ascorbate oxidase, fungal type. T 98.7
PLN02168 545 copper ion binding / pectinesterase 98.67
PLN02991 543 oxidoreductase 98.65
PRK10883 471 FtsI repressor; Provisional 98.64
PLN02191 574 L-ascorbate oxidase 98.63
PLN00044 596 multi-copper oxidase-related protein; Provisional 98.57
TIGR01480587 copper_res_A copper-resistance protein, CopA famil 98.48
PRK10965523 multicopper oxidase; Provisional 98.39
PF07731138 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR01 98.37
PF00394159 Cu-oxidase: Multicopper oxidase; InterPro: IPR0011 98.3
TIGR03095148 rusti_cyanin rusticyanin. Rusticyanin is a blue co 98.28
KOG1263 563 consensus Multicopper oxidases [Secondary metaboli 97.88
TIGR0265699 cyanin_plasto plastocyanin. Members of this family 97.73
COG2132451 SufI Putative multicopper oxidases [Secondary meta 97.43
TIGR03096135 nitroso_cyanin nitrosocyanin. Nitrosocyanin, as de 97.41
PF07732117 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR01 97.3
PF0012799 Copper-bind: Copper binding proteins, plastocyanin 97.08
PRK02888635 nitrous-oxide reductase; Validated 96.83
PF13473104 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 96.41
PRK02710119 plastocyanin; Provisional 96.32
TIGR03096135 nitroso_cyanin nitrosocyanin. Nitrosocyanin, as de 96.12
TIGR03095148 rusti_cyanin rusticyanin. Rusticyanin is a blue co 95.98
COG4454158 Uncharacterized copper-binding protein [Inorganic 95.41
TIGR02375116 pseudoazurin pseudoazurin. Pseudoazurin, also call 95.26
PF13473104 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 95.23
TIGR0265783 amicyanin amicyanin. Members of this family are am 94.9
TIGR03102115 halo_cynanin halocyanin domain. Halocyanins are bl 92.64
PF06525196 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Memb 92.58
TIGR0265699 cyanin_plasto plastocyanin. Members of this family 92.15
TIGR03094195 sulfo_cyanin sulfocyanin. Members of this family a 91.88
PF06525196 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Memb 91.13
PF00116120 COX2: Cytochrome C oxidase subunit II, periplasmic 90.74
TIGR02866201 CoxB cytochrome c oxidase, subunit II. Cytochrome 90.68
PF1269082 BsuPI: Intracellular proteinase inhibitor; InterPr 88.81
COG4454158 Uncharacterized copper-binding protein [Inorganic 88.44
>TIGR03389 laccase laccase, plant Back     alignment and domain information 
Probab=100.00  E-value=1.5e-79  Score=637.91  Aligned_cols=428  Identities=58%  Similarity=0.978  Sum_probs=318.1

Q ss_pred             Ccc-cCCCceEEeccCCCcccCCCCCCCcceEEecCChhHH---------HHhhhccCcchHHHHHHhhhhccCCCCCCC
Q 013875            2 LKR-SKSKARKWVCHRTCQMHTQSTGSQGPSFHVLRNVRKL---------SKLLEKTSSLGIDIIYSNLLKNSFGFLALN   71 (434)
Q Consensus         2 ~~~-~~~Gt~wYH~H~~~q~~~~~~Gl~G~liv~~~~~~~l---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (434)
                      ||+ .|+||||||||...|+ .   ||+|+|||.++.....         ..++.|+.......++.... .....+..+
T Consensus        92 f~~~~~~GT~WYHsH~~~~~-~---Gl~G~lIV~~~~~~~~~~~~~d~e~~l~l~Dw~~~~~~~~~~~~~-~~~~~~~~~  166 (539)
T TIGR03389        92 FTITGQRGTLWWHAHISWLR-A---TVYGAIVILPKPGVPYPFPKPDREVPIILGEWWNADVEAVINQAN-QTGGAPNVS  166 (539)
T ss_pred             EEecCCCeeEEEecCchhhh-c---cceEEEEEcCCCCCCCCCCCCCceEEEEecccccCCHHHHHHHHH-hcCCCCCcc
Confidence            676 6999999999996553 3   9999999887543211         11112221111112222211 112224567


Q ss_pred             CeEEEcCCCC------CCCceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCcccCCeeeeEEEeCCCCeEE
Q 013875           72 PTYIINSAPF------YLDTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTN  145 (434)
Q Consensus        72 d~~lvNG~~~------~~~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~~p~~~~~~~l~~geR~d  145 (434)
                      |.+|||||.+      ....+.++|++||+|||||||+|+.+.+.|+|+||+|+|||+||.+++|+.++++.|++|||||
T Consensus       167 d~~liNG~~~~~~~~~~~~~~~i~v~~G~~~RlRlINa~~~~~~~~~idgH~~~VIa~DG~~~~P~~~~~l~i~~GqRyd  246 (539)
T TIGR03389       167 DAYTINGHPGPLYNCSSKDTFKLTVEPGKTYLLRIINAALNDELFFAIANHTLTVVEVDATYTKPFKTKTIVIGPGQTTN  246 (539)
T ss_pred             ceEEECCCcCCCCCCCCCCceEEEECCCCEEEEEEEeccCCceEEEEECCCeEEEEEeCCcccCceEeCeEEecCCCEEE
Confidence            9999999953      0124689999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEeCCCCCceEEEEeccCCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhhhhhhhccccCCCCCCCCCCC
Q 013875          146 VLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADVP  225 (434)
Q Consensus       146 v~v~~~~~~g~~~l~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p  225 (434)
                      |+|++++++|+||||+....+|..........|||+|.+....+.+..+..+...++.....+...++.+..+.+|..+|
T Consensus       247 Vlv~a~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p  326 (539)
T TIGR03389       247 VLLTADQSPGRYFMAARPYMDAPGAFDNTTTTAILQYKGTSNSAKPILPTLPAYNDTAAATNFSNKLRSLNSAQYPANVP  326 (539)
T ss_pred             EEEECCCCCceEEEEEeccccCccCCCCcceEEEEEECCCCCCCCCCCCCCCCCCchhhhhHHHhhcccccccCCCCCCC
Confidence            99999987899999998765543223345689999998865443333333333333322222222344443333343344


Q ss_pred             cccceEEEEEeccCCCCCC--ccC--CCceEEEeecCccccCCChhhhHHhhhccCCccccCCCCCCCCCCCCCCCCCCC
Q 013875          226 QKVDRKLFYTIGFGKDSCP--TCV--NGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTA  301 (434)
Q Consensus       226 ~~~~~~~~l~~~~~~~~~~--~~~--g~~~~~~~iN~~sf~~p~~pll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~  301 (434)
                      ..+++++.+.+++......  .+.  ....+.|++||++|..|.+|+|.+.+.+++|.+..++++.+|+.|++++...+.
T Consensus       327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~in~~s~~~p~~p~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  406 (539)
T TIGR03389       327 VTIDRRLFFTIGLGLDPCPNNTCQGPNGTRFAASMNNISFVMPTTALLQAHYFGISGVFTTDFPANPPTKFNYTGTNLPN  406 (539)
T ss_pred             CCCCeEEEEEeecccccCcccccccCCCcEEEEEECCcccCCCCcchhhhhhcccCCccccCCccCCCccccCCCCCccc
Confidence            4567777666654322110  000  013577999999999999999988887777777777788888888877653223


Q ss_pred             CCCcccceeeeEeecCCeEEEEEEeCCCCCCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCCcE
Q 013875          302 SLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGW  381 (434)
Q Consensus       302 ~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~  381 (434)
                      ++..+.+++++.++.|++|+|+|+|.+.+....||||||||+||||++|.|.|+..+....+|+.||+||||+.||++||
T Consensus       407 ~~~~~~~~~v~~~~~~~~V~ivi~n~~~~~~~~HP~HLHGh~F~Vlg~g~g~~~~~~~~~~~nl~nP~rRDTv~vp~~g~  486 (539)
T TIGR03389       407 NLFTTNGTKVVRLKFNSTVELVLQDTSILGSENHPIHLHGYNFFVVGTGFGNFDPKKDPAKFNLVDPPERNTVGVPTGGW  486 (539)
T ss_pred             ccccccCceEEEecCCCEEEEEEecCCcCCCCCCcEeEcCCceEEEEeccCCCCcccCccccccCCCCeeeeEEcCCCce
Confidence            33344577889999999999999996533355899999999999999999999865555578999999999999999999


Q ss_pred             EEEEEEcCCceeeEEeecchhhHHccceeEEEEecCCCCCCCCCCCCCCCCCC
Q 013875          382 TAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGPGPDQSVLPPPTDLPPC  434 (434)
Q Consensus       382 v~irf~adnpG~w~~HCHil~H~d~GM~~~~~v~~~~~~~~~~~~~p~~~~~c  434 (434)
                      ++|||++||||.|+|||||+||+..||+++|.+.++++..++++++|..+|+|
T Consensus       487 vvirf~adNPG~W~~HCHi~~H~~~Gm~~~~~~~~~~~~~~~~~~~p~~~~~c  539 (539)
T TIGR03389       487 AAIRFVADNPGVWFMHCHLEVHTTWGLKMAFLVDNGKGPNQSLLPPPSDLPSC  539 (539)
T ss_pred             EEEEEecCCCeEEEEEecccchhhhcceEEEEEccCCCCccccCCCCccCCCC
Confidence            99999999999999999999999999999999988777777899999999999

Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate.
>PLN02792 oxidoreductase Back     alignment and domain information
>PLN00044 multi-copper oxidase-related protein; Provisional Back     alignment and domain information
>PLN02991 oxidoreductase Back     alignment and domain information
>PLN02835 oxidoreductase Back     alignment and domain information
>PLN02354 copper ion binding / oxidoreductase Back     alignment and domain information
>PLN02168 copper ion binding / pectinesterase Back     alignment and domain information
>TIGR03388 ascorbase L-ascorbate oxidase, plant type Back     alignment and domain information
>PLN02604 oxidoreductase Back     alignment and domain information
>KOG1263 consensus Multicopper oxidases [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN02191 L-ascorbate oxidase Back     alignment and domain information
>TIGR03390 ascorbOXfungal L-ascorbate oxidase, fungal type Back     alignment and domain information
>TIGR01480 copper_res_A copper-resistance protein, CopA family Back     alignment and domain information
>PRK10965 multicopper oxidase; Provisional Back     alignment and domain information
>PRK10883 FtsI repressor; Provisional Back     alignment and domain information
>COG2132 SufI Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PF07731 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR011706 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>TIGR02376 Cu_nitrite_red nitrite reductase, copper-containing Back     alignment and domain information
>PF00394 Cu-oxidase: Multicopper oxidase; InterPro: IPR001117 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>TIGR02376 Cu_nitrite_red nitrite reductase, copper-containing Back     alignment and domain information
>PLN02604 oxidoreductase Back     alignment and domain information
>TIGR03389 laccase laccase, plant Back     alignment and domain information
>PF07732 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR011707 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>PLN02835 oxidoreductase Back     alignment and domain information
>PLN02354 copper ion binding / oxidoreductase Back     alignment and domain information
>TIGR03388 ascorbase L-ascorbate oxidase, plant type Back     alignment and domain information
>PLN02792 oxidoreductase Back     alignment and domain information
>TIGR03390 ascorbOXfungal L-ascorbate oxidase, fungal type Back     alignment and domain information
>PLN02168 copper ion binding / pectinesterase Back     alignment and domain information
>PLN02991 oxidoreductase Back     alignment and domain information
>PRK10883 FtsI repressor; Provisional Back     alignment and domain information
>PLN02191 L-ascorbate oxidase Back     alignment and domain information
>PLN00044 multi-copper oxidase-related protein; Provisional Back     alignment and domain information
>TIGR01480 copper_res_A copper-resistance protein, CopA family Back     alignment and domain information
>PRK10965 multicopper oxidase; Provisional Back     alignment and domain information
>PF07731 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR011706 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>PF00394 Cu-oxidase: Multicopper oxidase; InterPro: IPR001117 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>TIGR03095 rusti_cyanin rusticyanin Back     alignment and domain information
>KOG1263 consensus Multicopper oxidases [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>TIGR02656 cyanin_plasto plastocyanin Back     alignment and domain information
>COG2132 SufI Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>TIGR03096 nitroso_cyanin nitrosocyanin Back     alignment and domain information
>PF07732 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR011707 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties Back     alignment and domain information
>PF00127 Copper-bind: Copper binding proteins, plastocyanin/azurin family; InterPro: IPR000923 Blue (type 1) copper proteins are small proteins which bind a single copper atom and which are characterised by an intense electronic absorption band near 600 nm [, ] Back     alignment and domain information
>PRK02888 nitrous-oxide reductase; Validated Back     alignment and domain information
>PF13473 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 1IC0_E 1IBY_D Back     alignment and domain information
>PRK02710 plastocyanin; Provisional Back     alignment and domain information
>TIGR03096 nitroso_cyanin nitrosocyanin Back     alignment and domain information
>TIGR03095 rusti_cyanin rusticyanin Back     alignment and domain information
>COG4454 Uncharacterized copper-binding protein [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR02375 pseudoazurin pseudoazurin Back     alignment and domain information
>PF13473 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 1IC0_E 1IBY_D Back     alignment and domain information
>TIGR02657 amicyanin amicyanin Back     alignment and domain information
>TIGR03102 halo_cynanin halocyanin domain Back     alignment and domain information
>PF06525 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus Back     alignment and domain information
>TIGR02656 cyanin_plasto plastocyanin Back     alignment and domain information
>TIGR03094 sulfo_cyanin sulfocyanin Back     alignment and domain information
>PF06525 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus Back     alignment and domain information
>PF00116 COX2: Cytochrome C oxidase subunit II, periplasmic domain This family corresponds to chains b and o Back     alignment and domain information
>TIGR02866 CoxB cytochrome c oxidase, subunit II Back     alignment and domain information
>PF12690 BsuPI: Intracellular proteinase inhibitor; InterPro: IPR020481 BsuPI is a intracellular proteinase inhibitor that directly regulates the major intracellular proteinase (ISP-1) activity in vivo Back     alignment and domain information
>COG4454 Uncharacterized copper-binding protein [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query434
1aoz_A552 Refined Crystal Structure Of Ascorbate Oxidase At 1 5e-35
1v10_A521 Structure Of Rigidoporus Lignosus Laccase From Hemi 1e-26
1gyc_A499 Crystal Structure Determination At Room Temperature 5e-26
2hrg_A496 Crystal Structure Of Blue Laccase From Trametes Tro 2e-25
1hfu_A503 Type-2 Cu-Depleted Laccase From Coprinus Cinereus A 1e-24
1a65_A504 Type-2 Cu-depleted Laccase From Coprinus Cinereus L 1e-24
4a2f_A497 Coriolopsis Gallica Laccase Collected At 12.65 Kev 3e-24
4a2d_A496 Coriolopsis Gallica Laccase T2 Copper Depleted At P 3e-24
3kw7_A502 Crystal Structure Of Lacb From Trametes Sp. Ah28-2 2e-23
3t6v_A495 Crystal Structure Of Laccase From Steccherinum Ochr 3e-21
3pxl_A499 Type-2 Cu-Depleted Fungus Laccase From Trametes Hir 3e-21
3fpx_A499 Native Fungus Laccase From Trametes Hirsuta Length 4e-21
2qt6_A498 Crystal Structure Determination Of A Blue Laccase F 5e-21
2hzh_A499 Crystal Structure Of Laccase From Coriolus Zonatus 5e-20
1zpu_A534 Crystal Structure Of Fet3p, A Multicopper Oxidase T 1e-19
2xyb_A497 Crystal Structure Of A Fully Functional Laccase Fro 2e-19
3div_A499 Crystal Structure Of Laccase From Cerrena Maxima At 7e-19
1kya_A499 Active Laccase From Trametes Versicolor Complexed W 2e-18
2h5u_A499 Crystal Structure Of Laccase From Cerrena Maxima At 3e-18
3sqr_A580 Crystal Structure Of Laccase From Botrytis Aclada A 8e-17
3v9e_A580 Structure Of The L513m Mutant Of The Laccase From B 1e-16
3pps_A604 Crystal Structure Of An Ascomycete Fungal Laccase F 2e-13
2q9o_A559 Near-Atomic Resolution Structure Of A Melanocarpus 5e-13
1gw0_A559 Crystal Structure Of Laccase From Melanocarpus Albo 5e-13
3dkh_A559 L559a Mutant Of Melanocarpus Albomyces Laccase Leng 5e-13
>pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9 Angstroms Resolution Length = 552 Back     alignment and structure 
Iteration: 1

 Score =  145 bits (366), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 107/337 (31%), Positives = 162/337 (48%), Gaps = 27/337 (8%)
Query: 86  FAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTN 145
           +   V   KTY +RI +      L FAI  H   VVE D  Y +PF T  I I  G++ +
Sbjct: 204 YIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGESYS 263
Query: 146 VLVQANQKPGR-YFMAARPFNDAPIPVDNKTATGILQYKGIPNSL--LPTLA--QLPASN 200
           VL+  +Q P   Y+++       P      T  G+     +PNS+  LPT    Q PA +
Sbjct: 264 VLITTDQNPSENYWVSVGTRARHP-----NTPPGLTLLNYLPNSVSKLPTSPPPQTPAWD 318
Query: 201 DSEFALNYNKKLRS-LNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNI 259
           D + + N+  ++ + + SPK P     K +R++F        +    +NG    A +N++
Sbjct: 319 DFDRSKNFTYRITAAMGSPKPPV----KFNRRIFLL------NTQNVINGYVKWA-INDV 367
Query: 260 SFVMPQTALLQAHYFNLKGVFKAXXXXXXXXXXNYTGAPLTASLGTSRATRLSKIAFNST 319
           S  +P T  L A  +NL   F                 P T    T     + +      
Sbjct: 368 SLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNE-KTRIGNGVYQFKIGEV 426
Query: 320 IELVLQDTNLLT---VESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAV 376
           ++++LQ+ N++     E+HP+HLHG++F+V+G G G F   +  ++ NL +P  RNT  +
Sbjct: 427 VDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFS-AEEESSLNLKNPPLRNTVVI 485
Query: 377 PTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFA 413
              GWTAIRF ADNPGVW  HCH+E H   G+   FA
Sbjct: 486 FPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFA 522
>pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From Hemihedrally Twinned Crystals Length = 521 Back     alignment and structure
>pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A Laccase From Trametes Versicolor In Its Oxidised Form Containing A Full Complement Of Copper Ions Length = 499 Back     alignment and structure
>pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii Complexed With P-Methylbenzoate Length = 496 Back     alignment and structure
>pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68 A Resolution Length = 503 Back     alignment and structure
>pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus Length = 504 Back     alignment and structure
>pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev Length = 497 Back     alignment and structure
>pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5 Length = 496 Back     alignment and structure
>pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2 Length = 502 Back     alignment and structure
>pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum Length = 495 Back     alignment and structure
>pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta Length = 499 Back     alignment and structure
>pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta Length = 499 Back     alignment and structure
>pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From Lentinus Tigrinus Length = 498 Back     alignment and structure
>pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6 A Resolution Length = 499 Back     alignment and structure
>pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That Functions In Iron Import Length = 534 Back     alignment and structure
>pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The Ligninolytic Fungus Pycnoporus Cinnabarinus Length = 497 Back     alignment and structure
>pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a Resolution Length = 499 Back     alignment and structure
>pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With 2,5-Xylidine Length = 499 Back     alignment and structure
>pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a Resolution Length = 499 Back     alignment and structure
>pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67 A Resolution Length = 580 Back     alignment and structure
>pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada Length = 580 Back     alignment and structure
>pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From Thielavia Arenaria Length = 604 Back     alignment and structure
>pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus Albomyces Laccase Length = 559 Back     alignment and structure
>pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces In Four Copper Form Length = 559 Back     alignment and structure
>pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase Length = 559 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query434
1aoz_A552 Ascorbate oxidase; oxidoreductase(oxygen acceptor) 1e-142
2q9o_A559 Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct 1e-121
1v10_A521 Laccase; multicopper blue oxidase, oxidase; 1.7A { 1e-120
3sqr_A580 Laccase; multicopper oxidase, glycosylation, oxido 1e-119
1zpu_A534 Iron transport multicopper oxidase FET3; ferroxida 1e-119
3pxl_A499 Laccase; 4-copper protein, metal-binding, oxidored 1e-117
3t6v_A495 Laccase; beta barrel, oxidoreductase; HET: CBS; 2. 1e-113
1hfu_A503 Laccase 1; oxidoreductase, blue multi-copper oxida 1e-111
2zwn_A339 Two-domain type laccase; muticopper oxidase, oxido 1e-41
2zwn_A339 Two-domain type laccase; muticopper oxidase, oxido 2e-10
3g5w_A318 Multicopper oxidase type 1; two domain, laccase, n 4e-31
3g5w_A318 Multicopper oxidase type 1; two domain, laccase, n 1e-11
2xu9_A439 Laccase; oxidoreductase, multicopper oxidases; 1.5 3e-29
2xu9_A439 Laccase; oxidoreductase, multicopper oxidases; 1.5 3e-04
3abg_A534 Bilirubin oxidase; cleavage on PAIR of basic resid 5e-24
3abg_A534 Bilirubin oxidase; cleavage on PAIR of basic resid 6e-04
3zx1_A481 Oxidoreductase, putative; laccase, metallo-oxidase 2e-23
3zx1_A 481 Oxidoreductase, putative; laccase, metallo-oxidase 9e-04
3gdc_A288 Multicopper oxidase; beta sandwich, plasmid, oxido 4e-20
3gdc_A288 Multicopper oxidase; beta sandwich, plasmid, oxido 5e-15
2g23_A612 PHS, phenoxazinone synthase; copper, metalloprotei 5e-18
3od3_A488 Blue copper oxidase CUEO; multicopper oxidase, Cu( 3e-14
3aw5_A448 Multicopper oxidase; beta barrel, oxidoreductase; 1e-12
3aw5_A448 Multicopper oxidase; beta barrel, oxidoreductase; 9e-10
2wsd_A513 Spore coat protein A; oxidoreductase, multi-copper 6e-12
2j5w_A1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 1e-11
2j5w_A 1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 3e-07
2j5w_A 1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 4e-07
2j5w_A1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 2e-06
2j5w_A 1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 8e-05
3kw8_A276 Laccase, putative copper oxidase; two-domain lacca 2e-11
3cg8_A343 Laccase; oxidoreductase, multicopper blue protein; 2e-11
1sdd_A306 Coagulation factor V; copper-binding protein, cofa 1e-10
1sdd_A306 Coagulation factor V; copper-binding protein, cofa 4e-04
2dv6_A447 Nitrite reductase; electron transfer, reduction, d 3e-10
2dv6_A447 Nitrite reductase; electron transfer, reduction, d 3e-08
2zoo_A442 Probable nitrite reductase; electron transfer, ele 8e-10
2zoo_A 442 Probable nitrite reductase; electron transfer, ele 2e-09
2r7e_A 742 Coagulation factor VIII; ceruloplasmin fold, cuppe 3e-09
2r7e_A742 Coagulation factor VIII; ceruloplasmin fold, cuppe 3e-09
2uxt_A451 Protein SUFI, SUFI; oxidoreductase, periplasmic, c 6e-09
2uxt_A451 Protein SUFI, SUFI; oxidoreductase, periplasmic, c 4e-06
1kbv_A327 ANIA, major outer membrane protein PAN 1; ANIA[NO2 2e-08
1kbv_A327 ANIA, major outer membrane protein PAN 1; ANIA[NO2 2e-07
1oe1_A336 Dissimilatory copper-containing nitrite reductase; 4e-07
1oe1_A336 Dissimilatory copper-containing nitrite reductase; 1e-06
2bw4_A340 Copper-containing nitrite reductase; oxidoreductas 1e-06
2bw4_A340 Copper-containing nitrite reductase; oxidoreductas 6e-06
1mzy_A333 Copper-containing nitrite reductase; mutant M182T, 3e-05
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* Length = 552 Back     alignment and structure
 Score =  415 bits (1069), Expect = e-142
 Identities = 106/357 (29%), Positives = 163/357 (45%), Gaps = 26/357 (7%)

Query: 84  DTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQT 143
             +   V   KTY +RI +      L FAI  H   VVE D  Y +PF T  I I  G++
Sbjct: 202 APYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGES 261

Query: 144 TNVLVQANQKPGR-YFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPT--LAQLPASN 200
            +VL+  +Q P   Y+++       P   +      +L Y     S LPT    Q PA +
Sbjct: 262 YSVLITTDQNPSENYWVSVGTRARHP---NTPPGLTLLNYLPNSVSKLPTSPPPQTPAWD 318

Query: 201 DSEFALNYNKKLRSLNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNIS 260
           D + + N+  ++ +      P   P K +R++F             V    +   +N++S
Sbjct: 319 DFDRSKNFTYRITAAMGSPKP---PVKFNRRIFLLNTQN-------VINGYVKWAINDVS 368

Query: 261 FVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLGTSRATRLSKIAFNSTI 320
             +P T  L A  +NL   F  + P +   P +Y       +  T     + +      +
Sbjct: 369 LALPPTPYLGAMKYNLLHAFDQNPPPEVF-PEDYDIDTPPTNEKTRIGNGVYQFKIGEVV 427

Query: 321 ELVLQDTNLLTV---ESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVP 377
           +++LQ+ N++     E+HP+HLHG++F+V+G G G F   +  ++ NL +P  RNT  + 
Sbjct: 428 DVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEE-ESSLNLKNPPLRNTVVIF 486

Query: 378 TGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGPGPDQSVLPPPTDLPPC 434
             GWTAIRF ADNPGVW  HCH+E H   G+   FA        + V   PT    C
Sbjct: 487 PYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAE-----GVEKVGRIPTKALAC 538
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* Length = 559 Back     alignment and structure
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 Length = 521 Back     alignment and structure
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} Length = 580 Back     alignment and structure
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} Length = 534 Back     alignment and structure
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* Length = 499 Back     alignment and structure
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* Length = 495 Back     alignment and structure
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* Length = 503 Back     alignment and structure
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} Length = 339 Back     alignment and structure
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} Length = 339 Back     alignment and structure
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} Length = 318 Back     alignment and structure
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} Length = 318 Back     alignment and structure
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A Length = 439 Back     alignment and structure
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A Length = 439 Back     alignment and structure
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* Length = 534 Back     alignment and structure
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* Length = 534 Back     alignment and structure
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} Length = 481 Back     alignment and structure
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} Length = 481 Back     alignment and structure
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} Length = 288 Back     alignment and structure
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} Length = 288 Back     alignment and structure
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... Length = 488 Back     alignment and structure
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} Length = 448 Back     alignment and structure
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} Length = 448 Back     alignment and structure
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A Length = 513 Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 Back     alignment and structure
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} Length = 276 Back     alignment and structure
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} Length = 343 Back     alignment and structure
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 Length = 306 Back     alignment and structure
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 Length = 306 Back     alignment and structure
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Length = 447 Back     alignment and structure
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Length = 447 Back     alignment and structure
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} Length = 442 Back     alignment and structure
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} Length = 442 Back     alignment and structure
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Length = 742 Back     alignment and structure
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Length = 742 Back     alignment and structure
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A Length = 451 Back     alignment and structure
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A Length = 451 Back     alignment and structure
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A Length = 327 Back     alignment and structure
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A Length = 327 Back     alignment and structure
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... Length = 336 Back     alignment and structure
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... Length = 336 Back     alignment and structure
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... Length = 340 Back     alignment and structure
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... Length = 340 Back     alignment and structure
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A Length = 333 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query434
1aoz_A552 Ascorbate oxidase; oxidoreductase(oxygen acceptor) 100.0
3sqr_A580 Laccase; multicopper oxidase, glycosylation, oxido 100.0
3pxl_A499 Laccase; 4-copper protein, metal-binding, oxidored 100.0
1zpu_A534 Iron transport multicopper oxidase FET3; ferroxida 100.0
3t6v_A495 Laccase; beta barrel, oxidoreductase; HET: CBS; 2. 100.0
1v10_A521 Laccase; multicopper blue oxidase, oxidase; 1.7A { 100.0
1hfu_A503 Laccase 1; oxidoreductase, blue multi-copper oxida 100.0
2q9o_A559 Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct 100.0
2xu9_A439 Laccase; oxidoreductase, multicopper oxidases; 1.5 100.0
3abg_A534 Bilirubin oxidase; cleavage on PAIR of basic resid 100.0
2wsd_A513 Spore coat protein A; oxidoreductase, multi-copper 100.0
3aw5_A448 Multicopper oxidase; beta barrel, oxidoreductase; 100.0
2uxt_A451 Protein SUFI, SUFI; oxidoreductase, periplasmic, c 100.0
3zx1_A481 Oxidoreductase, putative; laccase, metallo-oxidase 100.0
3gyr_A612 PHS, phenoxazinone synthase; metalloprotein, lacca 100.0
2g23_A612 PHS, phenoxazinone synthase; copper, metalloprotei 100.0
3od3_A488 Blue copper oxidase CUEO; multicopper oxidase, Cu( 100.0
2dv6_A447 Nitrite reductase; electron transfer, reduction, d 100.0
2r7e_A742 Coagulation factor VIII; ceruloplasmin fold, cuppe 100.0
2j5w_A1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 99.97
2j5w_A 1065 Ceruloplasmin, ferroxidase; oxidoreductase, plasma 99.97
3cg8_A343 Laccase; oxidoreductase, multicopper blue protein; 99.96
3gdc_A288 Multicopper oxidase; beta sandwich, plasmid, oxido 99.96
2zwn_A339 Two-domain type laccase; muticopper oxidase, oxido 99.96
3g5w_A318 Multicopper oxidase type 1; two domain, laccase, n 99.95
3kw8_A276 Laccase, putative copper oxidase; two-domain lacca 99.95
3tas_A313 Small laccase, multi-copper oxidase; two-domain la 99.94
3t9w_A299 Small laccase, multi-copper oxidase; two-domain co 99.94
1kbv_A327 ANIA, major outer membrane protein PAN 1; ANIA[NO2 99.94
3g5w_A318 Multicopper oxidase type 1; two domain, laccase, n 99.93
2zwn_A339 Two-domain type laccase; muticopper oxidase, oxido 99.92
1sdd_A306 Coagulation factor V; copper-binding protein, cofa 99.9
1sdd_B 647 Coagulation factor V; copper-binding protein, cofa 99.89
2zoo_A442 Probable nitrite reductase; electron transfer, ele 99.89
2bw4_A340 Copper-containing nitrite reductase; oxidoreductas 99.88
1mzy_A333 Copper-containing nitrite reductase; mutant M182T, 99.87
1kbv_A327 ANIA, major outer membrane protein PAN 1; ANIA[NO2 99.86
1oe1_A336 Dissimilatory copper-containing nitrite reductase; 99.86
2bw4_A340 Copper-containing nitrite reductase; oxidoreductas 99.85
2r7e_B 770 Coagulation factor VIII; ceruloplasmin fold, cuppe 99.85
2dv6_A447 Nitrite reductase; electron transfer, reduction, d 99.84
3gdc_A288 Multicopper oxidase; beta sandwich, plasmid, oxido 99.84
1mzy_A333 Copper-containing nitrite reductase; mutant M182T, 99.83
2r7e_A 742 Coagulation factor VIII; ceruloplasmin fold, cuppe 99.8
3tas_A313 Small laccase, multi-copper oxidase; two-domain la 99.8
1oe1_A336 Dissimilatory copper-containing nitrite reductase; 99.79
1sdd_A306 Coagulation factor V; copper-binding protein, cofa 99.79
2zoo_A 442 Probable nitrite reductase; electron transfer, ele 99.78
1sdd_B647 Coagulation factor V; copper-binding protein, cofa 99.78
3t9w_A299 Small laccase, multi-copper oxidase; two-domain co 99.75
3kw8_A276 Laccase, putative copper oxidase; two-domain lacca 99.74
2r7e_B770 Coagulation factor VIII; ceruloplasmin fold, cuppe 99.71
3cg8_A343 Laccase; oxidoreductase, multicopper blue protein; 99.65
2aan_A139 Auracyanin A; cupredoxin fold, electron transport; 99.25
3cvb_A105 Plastocyanin; cupredoxin, SELF assembly, copper, e 99.2
2xu9_A 439 Laccase; oxidoreductase, multicopper oxidases; 1.5 99.2
1aoz_A 552 Ascorbate oxidase; oxidoreductase(oxygen acceptor) 99.06
2uxt_A 451 Protein SUFI, SUFI; oxidoreductase, periplasmic, c 99.05
3pxl_A 499 Laccase; 4-copper protein, metal-binding, oxidored 99.01
3t6v_A 495 Laccase; beta barrel, oxidoreductase; HET: CBS; 2. 98.99
1v10_A 521 Laccase; multicopper blue oxidase, oxidase; 1.7A { 98.97
2gim_A106 Plastocyanin; beta sheet, Cu, helix, electron tran 98.93
3sqr_A 580 Laccase; multicopper oxidase, glycosylation, oxido 98.9
1hfu_A 503 Laccase 1; oxidoreductase, blue multi-copper oxida 98.9
2q9o_A 559 Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct 98.85
1qhq_A140 Protein (auracyanin); electron transfer, cupredoxi 98.84
1zpu_A 534 Iron transport multicopper oxidase FET3; ferroxida 98.8
1pcs_A98 Plastocyanin; electron transport; 2.15A {Synechocy 98.71
2plt_A98 Plastocyanin; electron transport; 1.50A {Chlamydom 98.7
1bxv_A91 Plastocyanin; copper protein, electron transfer; 1 98.64
1b3i_A97 PETE protein, protein (plastocyanin); electron tra 98.59
3od3_A488 Blue copper oxidase CUEO; multicopper oxidase, Cu( 98.51
1iby_A112 Nitrosocyanin; RED copper, cupredoxin, beta hairpi 98.48
3zx1_A481 Oxidoreductase, putative; laccase, metallo-oxidase 98.47
4hci_A100 Cupredoxin 1; structural genomics, niaid, national 98.47
1byp_A99 Protein (plastocyanin); electron transfer, photosy 98.46
1kdj_A102 Plastocyanin; electron transfer, photosystem, PAI- 98.4
2g23_A612 PHS, phenoxazinone synthase; copper, metalloprotei 98.27
2cal_A154 Rusticyanin; iron respiratory electron transport c 98.16
1plc_A99 Plastocyanin; electron transport; 1.33A {Populus n 98.15
3aw5_A 448 Multicopper oxidase; beta barrel, oxidoreductase; 98.11
3abg_A 534 Bilirubin oxidase; cleavage on PAIR of basic resid 98.05
1fwx_A595 Nitrous oxide reductase; beta-propeller domain, cu 98.02
2ov0_A105 Amicyanin; beta-sandwich, electron transport; 0.75 97.98
2wsd_A513 Spore coat protein A; oxidoreductase, multi-copper 97.91
3gyr_A612 PHS, phenoxazinone synthase; metalloprotein, lacca 97.54
2aan_A139 Auracyanin A; cupredoxin fold, electron transport; 97.34
1iuz_A98 Plastocyanin; electron transport; 1.60A {Ulva pert 97.3
3tu6_A127 Pseudoazurin (blue copper protein); cupredoxins, b 97.28
3erx_A123 Pseudoazurin; copper protein, high-resolution, E t 97.27
1id2_A106 Amicyanin; beta barrel, type-1 blue copper protein 97.21
3ef4_A124 Pseudoazurin, blue copper protein; electron transf 97.16
3c75_A132 Amicyanin; copper proteins, electron transfer comp 97.07
1iby_A112 Nitrosocyanin; RED copper, cupredoxin, beta hairpi 96.71
1paz_A123 Pseudoazurin precursor; electron transfer(cupropro 96.57
3sbq_A638 Nitrous-oxide reductase; beta-propeller, cupredoxi 96.56
1pmy_A123 Pseudoazurin; electron transfer(cuproprotein); 1.5 96.49
3cvb_A105 Plastocyanin; cupredoxin, SELF assembly, copper, e 96.39
3ay2_A167 Lipid modified azurin protein; beta sandwich, bact 96.26
2cua_A135 Protein (CUA); CUA center, electron transport; 1.6 95.93
1cuo_A129 Protein (azurin ISO-2); beta barrel, periplasmic, 95.89
4hci_A100 Cupredoxin 1; structural genomics, niaid, national 95.75
2ux6_A122 Pseudoazurin; type-1 copper, metal-binding, redox 95.67
2iaa_C128 Azurin; quinoprotein, tryptophan tryptophylquinone 95.04
1qhq_A140 Protein (auracyanin); electron transfer, cupredoxi 94.86
2ccw_A129 Azurin II, AZN-2; electron transport (cuproprotein 94.74
2gim_A106 Plastocyanin; beta sheet, Cu, helix, electron tran 94.64
2cal_A154 Rusticyanin; iron respiratory electron transport c 94.48
2ccw_A129 Azurin II, AZN-2; electron transport (cuproprotein 94.33
3fsa_A125 Azurin; copper, cupredoxin fold, metal-binding, pr 94.27
1nwp_A128 Azurin; electron transport, cupredoxin, electron t 94.16
1nwp_A128 Azurin; electron transport, cupredoxin, electron t 94.14
3s8f_B168 Cytochrome C oxidase subunit 2; complex IV, respir 94.09
2iaa_C128 Azurin; quinoprotein, tryptophan tryptophylquinone 93.47
3ay2_A167 Lipid modified azurin protein; beta sandwich, bact 93.4
3fsa_A125 Azurin; copper, cupredoxin fold, metal-binding, pr 93.38
1cuo_A129 Protein (azurin ISO-2); beta barrel, periplasmic, 93.35
1bxv_A91 Plastocyanin; copper protein, electron transfer; 1 92.84
2plt_A98 Plastocyanin; electron transport; 1.50A {Chlamydom 92.8
1pcs_A98 Plastocyanin; electron transport; 2.15A {Synechocy 92.56
1fwx_A595 Nitrous oxide reductase; beta-propeller domain, cu 92.22
3tu6_A127 Pseudoazurin (blue copper protein); cupredoxins, b 92.01
1kdj_A102 Plastocyanin; electron transfer, photosystem, PAI- 91.88
3erx_A123 Pseudoazurin; copper protein, high-resolution, E t 91.64
1b3i_A97 PETE protein, protein (plastocyanin); electron tra 91.33
1iuz_A98 Plastocyanin; electron transport; 1.60A {Ulva pert 90.16
2ov0_A105 Amicyanin; beta-sandwich, electron transport; 0.75 89.82
3ef4_A124 Pseudoazurin, blue copper protein; electron transf 89.21
1pmy_A123 Pseudoazurin; electron transfer(cuproprotein); 1.5 87.65
1byp_A99 Protein (plastocyanin); electron transfer, photosy 87.35
1paz_A123 Pseudoazurin precursor; electron transfer(cupropro 87.03
1plc_A99 Plastocyanin; electron transport; 1.33A {Populus n 86.29
3isy_A120 Bsupi, intracellular proteinase inhibitor; intrace 85.15
2cua_A135 Protein (CUA); CUA center, electron transport; 1.6 83.55
3sbq_A638 Nitrous-oxide reductase; beta-propeller, cupredoxi 82.82
1id2_A106 Amicyanin; beta barrel, type-1 blue copper protein 82.59
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* Back     alignment and structure
Probab=100.00  E-value=9.8e-76  Score=613.66  Aligned_cols=409  Identities=27%  Similarity=0.411  Sum_probs=303.7

Q ss_pred             CcccCCCceEEeccCCCcccCCCCCCCcceEEecCChh--------HHHHhhhccCcchHHHHHHhhhhccCCCCCCCCe
Q 013875            2 LKRSKSKARKWVCHRTCQMHTQSTGSQGPSFHVLRNVR--------KLSKLLEKTSSLGIDIIYSNLLKNSFGFLALNPT   73 (434)
Q Consensus         2 ~~~~~~Gt~wYH~H~~~q~~~~~~Gl~G~liv~~~~~~--------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~   73 (434)
                      |++.|+||||||||.+.|+.+   ||+|+|||.+++..        +...++.++.......++......+.+....++.
T Consensus        93 f~~~~~GT~wYHsH~~~q~~~---Gl~G~liV~~~~~~~~~~~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~~~~  169 (552)
T 1aoz_A           93 FTVDNPGTFFYHGHLGMQRSA---GLYGSLIVDPPQGKKEPFHYDGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQT  169 (552)
T ss_dssp             EECCSCEEEEEEECSTTTGGG---TCEEEEEEECCTTCCCSSCCSEEEEEEEEEECSSCHHHHHHHTTSSSCCCCCSCSE
T ss_pred             EECCCCEEEEEEECchhHHhc---cCeeeEEEeCCcccCCCCCCCccceEEeecccCCCHHHHHhhhhcccccCCCCCCe
Confidence            678999999999999999998   99999998876421        1111222222221122222222222233345799


Q ss_pred             EEEcCCCCC-C---------------------CceeEEEeCCcEEEEEEEecCCCCeeEEEEcCCeeEEEEeCCcccCCe
Q 013875           74 YIINSAPFY-L---------------------DTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPF  131 (434)
Q Consensus        74 ~lvNG~~~~-~---------------------~~~~~~v~~g~~~rlR~iN~~~~~~~~~~i~g~~~~via~DG~~~~p~  131 (434)
                      +||||+... +                     ..+.++|++|++|||||||+|+.+.+.|+|+||+|+|||+||++++|+
T Consensus       170 ~liNG~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P~  249 (552)
T 1aoz_A          170 ILLNGRGQFDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEADGNYVQPF  249 (552)
T ss_dssp             EEETTBCCSSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEETTCCEEEEEETTEEEEEE
T ss_pred             EEECCccccCcccCcccccccccccccCCCCCCceEEEEcCCCEEEEEEEcccccceEEEEEcCcEEEEEEECCcccCce
Confidence            999999641 0                     012799999999999999999999999999999999999999999999


Q ss_pred             eeeEEEeCCCCeEEEEEEe-CCCCCceEEEEeccCCCCCCCCCcceEEEEEEcCCCCCCCC--CCCCCCCCCChhhhhhh
Q 013875          132 TTEAILIAPGQTTNVLVQA-NQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLP--TLAQLPASNDSEFALNY  208 (434)
Q Consensus       132 ~~~~~~l~~geR~dv~v~~-~~~~g~~~l~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~--~~p~~p~~~~~~~~~~~  208 (434)
                      .++++.|+|||||||+|++ ++.+|+|||++.... +.  .+.....|+|+|.+......+  ..|..|.+++......+
T Consensus       250 ~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~~-~~--~~~~~~~ail~y~~~~~~~~p~~~~p~~p~~~~~~~~~~~  326 (552)
T 1aoz_A          250 YTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRA-RH--PNTPPGLTLLNYLPNSVSKLPTSPPPQTPAWDDFDRSKNF  326 (552)
T ss_dssp             EESCEEECTTCEEEEEEECCSCTTCCEEEEEEEES-SC--CCSCCEEEEEEETTSCTTSCCSSCCCCCCCTTCHHHHHHH
T ss_pred             EEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEccc-CC--CCCccEEEEEEECCCCCCCCCCCCCCCCCccccccccccc
Confidence            9999999999999999999 555699999998754 21  134568999999876532211  22334444544332221


Q ss_pred             hhccccCCCCCCCCCCCcccceEEEEEeccCCCCCCccCCCceEEEeecCccccCCChhhhHHhhhccCCccccCCCCCC
Q 013875          209 NKKLRSLNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKP  288 (434)
Q Consensus       209 ~~~l~~l~~~~~p~~~p~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~iN~~sf~~p~~pll~~~~~~~~g~~~~~~~~~~  288 (434)
                        .++.+..+. +...+..+++++.+.+++....       +...|+|||++|..|..|+|.+.+.+++|.|..+++..+
T Consensus       327 --~l~~l~~~~-~~~~~~~~~~~~~l~~~~~~~~-------~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~  396 (552)
T 1aoz_A          327 --TYRITAAMG-SPKPPVKFNRRIFLLNTQNVIN-------GYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEV  396 (552)
T ss_dssp             --HTTCCBCTT-CCCCCSSCSEEEEEEEEEEEET-------TEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSC
T ss_pred             --cccccccCC-CCCCCCCCcEEEEEEEeeccCC-------CeEEEEECCCccCCCCCCHHHHHhhcCccccccCCCccc
Confidence              233332222 2234566788888776543211       345799999999999999999988888888876655433


Q ss_pred             C-CCCCCCCCCCCCCCCcccceeeeEeecCCeEEEEEEeCCCCC---CCCCCccccCCceEEEEecCCcCCCCCCCCCCC
Q 013875          289 P-KPFNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLT---VESHPFHLHGYNFFVVGTGIGNFDPVKYPANYN  364 (434)
Q Consensus       289 p-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~---~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n  364 (434)
                      + ..|+++..  +.+...+.++.++.++.|++|+|+|+|.+.+.   ...||||||||+||||++|.|.|++ .+...+|
T Consensus       397 ~~~~~~~~~~--~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~-~~~~~~n  473 (552)
T 1aoz_A          397 FPEDYDIDTP--PTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSA-EEESSLN  473 (552)
T ss_dssp             CCTTCCTTSC--CCCTTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCG-GGGGGSC
T ss_pred             cccccccccc--cccccccccceEEEecCCCEEEEEEeCCcccccccCCCCCEEEcCCceEEEecccCccCc-ccccccc
Confidence            3 13444321  11123456788899999999999999976433   5679999999999999999898876 4456789


Q ss_pred             CCCCCccceeEecCCcEEEEEEEcCCceeeEEeecchhhHHccceeEEEEecCCCCCCCCCCCCCCCCCC
Q 013875          365 LVDPIERNTAAVPTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGPGPDQSVLPPPTDLPPC  434 (434)
Q Consensus       365 ~~~p~~rDTv~vp~~g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~v~~~~~~~~~~~~~p~~~~~c  434 (434)
                      +.+|+|||||.|+++||++|||+|||||.|+|||||+||++.|||++|.|...     ++.++|.++++|
T Consensus       474 ~~~p~~RDTv~vpp~g~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~-----~~~~~P~~~~~C  538 (552)
T 1aoz_A          474 LKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVE-----KVGRIPTKALAC  538 (552)
T ss_dssp             CSSCCEESEEEECTTEEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECGG-----GCCCCCHHHHSS
T ss_pred             cCCCCccCeEEeCCCceEEEEEEcCCCeEEEEEeeehhHhhCCCeEEEEeCch-----hhccCCcchhhh
Confidence            99999999999999999999999999999999999999999999999987542     566789999999
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} Back     alignment and structure
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* Back     alignment and structure
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} Back     alignment and structure
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* Back     alignment and structure
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 Back     alignment and structure
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* Back     alignment and structure
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* Back     alignment and structure
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A Back     alignment and structure
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* Back     alignment and structure
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A Back     alignment and structure
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} Back     alignment and structure
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A Back     alignment and structure
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} Back     alignment and structure
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus} Back     alignment and structure
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... Back     alignment and structure
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Back     alignment and structure
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Back     alignment and structure
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Back     alignment and structure
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} Back     alignment and structure
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} Back     alignment and structure
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} Back     alignment and structure
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} Back     alignment and structure
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A* Back     alignment and structure
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A* Back     alignment and structure
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP} Back     alignment and structure
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A Back     alignment and structure
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} Back     alignment and structure
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} Back     alignment and structure
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 Back     alignment and structure
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 Back     alignment and structure
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} Back     alignment and structure
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... Back     alignment and structure
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A Back     alignment and structure
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A Back     alignment and structure
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... Back     alignment and structure
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... Back     alignment and structure
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* Back     alignment and structure
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Back     alignment and structure
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} Back     alignment and structure
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A Back     alignment and structure
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Back     alignment and structure
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A* Back     alignment and structure
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... Back     alignment and structure
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 Back     alignment and structure
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} Back     alignment and structure
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 Back     alignment and structure
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP} Back     alignment and structure
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A* Back     alignment and structure
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* Back     alignment and structure
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} Back     alignment and structure
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus} Back     alignment and structure
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A Back     alignment and structure
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A Back     alignment and structure
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* Back     alignment and structure
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A Back     alignment and structure
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* Back     alignment and structure
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* Back     alignment and structure
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 Back     alignment and structure
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A Back     alignment and structure
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} Back     alignment and structure
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* Back     alignment and structure
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* Back     alignment and structure
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A Back     alignment and structure
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} Back     alignment and structure
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A Back     alignment and structure
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1 Back     alignment and structure
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A Back     alignment and structure
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A* Back     alignment and structure
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... Back     alignment and structure
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A Back     alignment and structure
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} Back     alignment and structure
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A Back     alignment and structure
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A Back     alignment and structure
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A Back     alignment and structure
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A Back     alignment and structure
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A Back     alignment and structure
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} Back     alignment and structure
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* Back     alignment and structure
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A Back     alignment and structure
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ... Back     alignment and structure
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A Back     alignment and structure
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus} Back     alignment and structure
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus} Back     alignment and structure
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A Back     alignment and structure
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti} Back     alignment and structure
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A Back     alignment and structure
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1 Back     alignment and structure
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0 Back     alignment and structure
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} Back     alignment and structure
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A Back     alignment and structure
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A* Back     alignment and structure
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A Back     alignment and structure
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1 Back     alignment and structure
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A Back     alignment and structure
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae} Back     alignment and structure
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B* Back     alignment and structure
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A Back     alignment and structure
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A Back     alignment and structure
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A Back     alignment and structure
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C* Back     alignment and structure
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A Back     alignment and structure
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A Back     alignment and structure
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A Back     alignment and structure
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A Back     alignment and structure
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A Back     alignment and structure
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ... Back     alignment and structure
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A Back     alignment and structure
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A Back     alignment and structure
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ... Back     alignment and structure
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C* Back     alignment and structure
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae} Back     alignment and structure
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ... Back     alignment and structure
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A Back     alignment and structure
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A Back     alignment and structure
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1 Back     alignment and structure
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A Back     alignment and structure
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A Back     alignment and structure
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti} Back     alignment and structure
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A Back     alignment and structure
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A Back     alignment and structure
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A* Back     alignment and structure
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A Back     alignment and structure
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ... Back     alignment and structure
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0 Back     alignment and structure
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1 Back     alignment and structure
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A Back     alignment and structure
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A* Back     alignment and structure
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A Back     alignment and structure
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis} Back     alignment and structure
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B* Back     alignment and structure
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A Back     alignment and structure
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 434
d1aoza3214 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (C 9e-48
d1gyca3199 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, 2e-30
d1v10a2168 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus 1e-29
d2q9oa3216 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyce 4e-29
d1hfua3200 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Copr 9e-29
d1gyca2170 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, 3e-28
d1aoza2209 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (C 4e-28
d1hfua2172 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Copr 2e-27
d2q9oa2181 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyce 3e-27
d1v10a3190 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus 1e-25
d1gska3154 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Ba 2e-23
d1kv7a3181 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Esc 4e-17
d1kv7a2165 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Esc 6e-16
d1gska2174 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Ba 2e-13
d1sddb2139 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (B 2e-12
d2j5wa5149 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sa 1e-11
d1kcwa2146 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sap 3e-11
d2j5wa2145 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sap 3e-10
d2bw4a2173 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcali 4e-09
d1sdda2116 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos 3e-07
d1kbva2151 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisse 3e-06
d1e30a_153 b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidan 5e-05
d1aoza1129 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cuc 3e-04
d1oe1a2177 b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcali 4e-04
d1gyca1130 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, la 5e-04
d2q9oa1162 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces 8e-04
d1qhqa_139 b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus 0.001
d1oe2a1159 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcalige 0.003
>d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 214 Back     information, alignment and structure

class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Ascorbate oxidase
species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]

 Score =  161 bits (407), Expect = 9e-48
 Identities = 68/213 (31%), Positives = 106/213 (49%), Gaps = 17/213 (7%)

Query: 225 PQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADF 284
           P K +R++F             +NG  +   +N++S  +P T  L A  +NL   F  + 
Sbjct: 2   PVKFNRRIFLLNTQNV------INGY-VKWAINDVSLALPPTPYLGAMKYNLLHAFDQNP 54

Query: 285 PDKPPKPFNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLL---TVESHPFHLHG 341
           P +   P +Y       +  T     + +      ++++LQ+ N++     E+HP+HLHG
Sbjct: 55  PPEVF-PEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHG 113

Query: 342 YNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPGVWFMHCHLE 401
           ++F+V+G G G F   +  ++ NL +P  RNT  +   GWTAIRF ADNPGVW  HCH+E
Sbjct: 114 HDFWVLGYGDGKFSAEE-ESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIE 172

Query: 402 LHTGWGLKTAFAVEDGPGPDQSVLPPPTDLPPC 434
            H   G+   FA     G ++ V   PT    C
Sbjct: 173 PHLHMGMGVVFAE----GVEK-VGRIPTKALAC 200
>d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 199 Back     information, alignment and structure
>d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 168 Back     information, alignment and structure
>d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 216 Back     information, alignment and structure
>d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 200 Back     information, alignment and structure
>d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 170 Back     information, alignment and structure
>d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 209 Back     information, alignment and structure
>d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 172 Back     information, alignment and structure
>d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 181 Back     information, alignment and structure
>d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 190 Back     information, alignment and structure
>d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Length = 154 Back     information, alignment and structure
>d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 181 Back     information, alignment and structure
>d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 165 Back     information, alignment and structure
>d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Length = 174 Back     information, alignment and structure
>d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 139 Back     information, alignment and structure
>d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 149 Back     information, alignment and structure
>d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 146 Back     information, alignment and structure
>d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 145 Back     information, alignment and structure
>d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Length = 173 Back     information, alignment and structure
>d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 116 Back     information, alignment and structure
>d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Length = 151 Back     information, alignment and structure
>d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} Length = 153 Back     information, alignment and structure
>d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 129 Back     information, alignment and structure
>d1oe1a2 b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Length = 177 Back     information, alignment and structure
>d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 130 Back     information, alignment and structure
>d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 162 Back     information, alignment and structure
>d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId: 1108]} Length = 139 Back     information, alignment and structure
>d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Length = 159 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query434
d1aoza3214 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 100.0
d1hfua3200 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 100.0
d1gyca3199 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 100.0
d1v10a3190 Laccase {Rigidoporus lignosus [TaxId: 219653]} 100.0
d1gska3154 Spore coat protein A, CotA {Bacillus subtilis [Tax 100.0
d2q9oa3216 Laccase {Melanocarpus albomyces [TaxId: 204285]} 99.98
d1v10a2168 Laccase {Rigidoporus lignosus [TaxId: 219653]} 99.96
d2q9oa2181 Laccase {Melanocarpus albomyces [TaxId: 204285]} 99.96
d1gyca2170 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 99.95
d1kv7a3181 multi-copper oxidase CueO {Escherichia coli [TaxId 99.95
d1hfua2172 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 99.95
d1aoza2209 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 99.94
d2j5wa5149 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.91
d2j5wa2145 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.89
d1sddb2139 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 99.88
d1kbva2151 Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani 99.86
d1sdda2116 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 99.86
d1kcwa2146 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.86
d1gska2174 Spore coat protein A, CotA {Bacillus subtilis [Tax 99.83
d1kv7a2165 multi-copper oxidase CueO {Escherichia coli [TaxId 99.82
d2bw4a2173 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.73
d1oe1a2177 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.69
d1e30a_153 Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920 99.61
d1aoza1129 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 99.53
d1kbva1151 Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani 99.41
d2bw4a1157 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.4
d1mzya1153 Nitrite reductase, NIR {Rhodobacter sphaeroides [T 99.38
d2q9oa1162 Laccase {Melanocarpus albomyces [TaxId: 204285]} 99.33
d1oe2a1159 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 99.32
d1hfua1131 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 99.17
d1qhqa_139 Auracyanin {Chloroflexus aurantiacus [TaxId: 1108] 99.15
d1kbva2151 Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani 99.13
d1kv7a1140 multi-copper oxidase CueO {Escherichia coli [TaxId 99.09
d2j5wa1192 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 99.07
d1gyca1130 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 99.05
d1ibya_112 Red copper protein nitrosocyanin {Nitrosomonas eur 99.01
d1kv7a3181 multi-copper oxidase CueO {Escherichia coli [TaxId 98.93
d1v10a1136 Laccase {Rigidoporus lignosus [TaxId: 219653]} 98.9
d2j5wa5149 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 98.76
d2j5wa2145 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 98.73
d1sddb2139 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 98.65
d1fwxa1132 Nitrous oxide reductase, C-terminal domain {Paraco 98.63
d1sdda1180 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 98.62
d1kcwa2146 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 98.59
d1sdda2116 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 98.49
d2bw4a2173 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 98.49
d2j5wa3207 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 98.42
d1oe1a2177 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 98.39
d1gska3154 Spore coat protein A, CotA {Bacillus subtilis [Tax 98.38
d1qnia1131 Nitrous oxide reductase, C-terminal domain {Pseudo 98.32
d1gska1181 Spore coat protein A, CotA {Bacillus subtilis [Tax 98.24
d2j5wa4179 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 98.19
d1sddb167 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 98.15
d1hfua3200 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 98.05
d1e30a_153 Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920 97.87
d1v10a2168 Laccase {Rigidoporus lignosus [TaxId: 219653]} 97.82
d1v10a3190 Laccase {Rigidoporus lignosus [TaxId: 219653]} 97.7
d1aoza1129 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 97.7
d1oe2a1159 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 97.67
d1kv7a1140 multi-copper oxidase CueO {Escherichia coli [TaxId 97.66
d1aoza2209 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 97.55
d1mzya2178 Nitrite reductase, NIR {Rhodobacter sphaeroides [T 97.54
d1aoza3214 Ascorbate oxidase {Zucchini (Cucurbita pepo var. m 97.54
d2bw4a1157 Nitrite reductase, NIR {Alcaligenes xylosoxidans [ 97.51
d2cuaa_122 Cytochrome c oxidase {Thermus thermophilus, ba3 ty 97.46
d2q9oa2181 Laccase {Melanocarpus albomyces [TaxId: 204285]} 97.45
d1gyca2170 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 97.45
d1gyca1130 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 97.43
d1hfua2172 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 97.42
d2q5ba1105 Plastocyanin {Cyanobacterium (Phormidium laminosum 97.41
d1hfua1131 Laccase {Inky cap fungus (Coprinus cinereus) [TaxI 97.41
d1mzya1153 Nitrite reductase, NIR {Rhodobacter sphaeroides [T 97.39
d1kbva1151 Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani 97.38
d1gyca3199 Laccase {Trametes versicolor, laccase 2 [TaxId: 53 97.35
d1mzya2178 Nitrite reductase, NIR {Rhodobacter sphaeroides [T 97.29
d1v10a1136 Laccase {Rigidoporus lignosus [TaxId: 219653]} 97.25
d1pcsa_98 Plastocyanin {Cyanobacterium (Synechocystis sp.), 97.24
d2q9oa1162 Laccase {Melanocarpus albomyces [TaxId: 204285]} 97.23
d1bxua_91 Plastocyanin {Cyanobacterium (Synechocystis sp.), 97.22
d2plta_98 Plastocyanin {Green alga (Chlamydomonas reinhardti 97.11
d1sddb167 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 97.11
d1pmya_123 Pseudoazurin {Methylobacterium extorquens, strain 96.95
d2q9oa3216 Laccase {Melanocarpus albomyces [TaxId: 204285]} 96.89
d2jxma197 Plastocyanin {Photosynthetic prokaryote (Prochloro 96.63
d1ibya_112 Red copper protein nitrosocyanin {Nitrosomonas eur 96.58
d1plca_99 Plastocyanin {Poplar (Populus nigra), variant ital 96.55
d1paza_120 Pseudoazurin {Alcaligenes faecalis, strain s-6 [Ta 96.47
d2ccwa1129 Azurin {Alcaligenes xylosoxidans, NCIMB (11015), d 96.42
d1cuoa_129 Azurin {Methylomonas sp. j [TaxId: 32038]} 96.41
d1nwpa_128 Azurin {Pseudomonas putida [TaxId: 303]} 96.26
d2ov0a1105 Amicyanin {Paracoccus denitrificans [TaxId: 266]} 96.12
d2cj3a1105 Plastocyanin {Anabaena variabilis [TaxId: 1172]} 96.11
d1jzga_128 Azurin {Pseudomonas aeruginosa [TaxId: 287]} 96.1
d1bqka_124 Pseudoazurin {Achromobacter cycloclastes [TaxId: 2 95.94
d1iuza_98 Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 95.9
d1adwa_123 Pseudoazurin {Thiosphaera pantotropha [TaxId: 8236 95.76
d1fwxa1132 Nitrous oxide reductase, C-terminal domain {Paraco 95.52
d1bypa_99 Plastocyanin {White campion (Silene pratensis) [Ta 95.32
d1qhqa_139 Auracyanin {Chloroflexus aurantiacus [TaxId: 1108] 95.22
d1kdja_102 Plastocyanin {Fern (Adiantum capillus-veneris) [Ta 94.84
d1gska1181 Spore coat protein A, CotA {Bacillus subtilis [Tax 94.81
d1kv7a2165 multi-copper oxidase CueO {Escherichia coli [TaxId 94.79
d1gska2174 Spore coat protein A, CotA {Bacillus subtilis [Tax 94.07
d1id2a_106 Amicyanin {Paracoccus versutus (Thiobacillus versu 94.04
d1qnia1131 Nitrous oxide reductase, C-terminal domain {Pseudo 93.91
d2ccwa1129 Azurin {Alcaligenes xylosoxidans, NCIMB (11015), d 93.68
d1cuoa_129 Azurin {Methylomonas sp. j [TaxId: 32038]} 92.65
d1jzga_128 Azurin {Pseudomonas aeruginosa [TaxId: 287]} 91.79
d2j5wa3207 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 91.4
d1nwpa_128 Azurin {Pseudomonas putida [TaxId: 303]} 90.48
d2cuaa_122 Cytochrome c oxidase {Thermus thermophilus, ba3 ty 90.43
d2j5wa1192 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 89.48
d1pmya_123 Pseudoazurin {Methylobacterium extorquens, strain 88.25
d1adwa_123 Pseudoazurin {Thiosphaera pantotropha [TaxId: 8236 86.13
d1bqka_124 Pseudoazurin {Achromobacter cycloclastes [TaxId: 2 85.68
d1cyxa_158 Quinol oxidase (CyoA) {Escherichia coli [TaxId: 56 85.36
d1sdda1180 Coagulation factor V {Cow (Bos taurus) [TaxId: 991 85.18
d2j5wa4179 Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} 84.28
d1w8oa1103 Sialidase, "linker" domain {Micromonospora viridif 80.53
>d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
class: All beta proteins
fold: Cupredoxin-like
superfamily: Cupredoxins
family: Multidomain cupredoxins
domain: Ascorbate oxidase
species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]

Probab=100.00  E-value=4.2e-42  Score=311.75  Aligned_cols=194  Identities=34%  Similarity=0.592  Sum_probs=155.5

Q ss_pred             CcccceEEEEEeccCCCCCCccCCCceEEEeecCccccCCChhhhHHhhhccCCccccCCCCCCCCCC--CCCCCCCCCC
Q 013875          225 PQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPF--NYTGAPLTAS  302 (434)
Q Consensus       225 p~~~~~~~~l~~~~~~~~~~~~~g~~~~~~~iN~~sf~~p~~pll~~~~~~~~g~~~~~~~~~~p~~~--~~~~~~~~~~  302 (434)
                      |.+.++++++....+.     .+  +...|++||+||..|.+|+|.+.+....+.++.+.+   +..|  +++....+.+
T Consensus         2 P~~~~~ti~l~~~~~~-----~n--g~~~~~iNniSf~~P~~P~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~   71 (214)
T d1aoza3           2 PVKFNRRIFLLNTQNV-----IN--GYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPP---PEVFPEDYDIDTPPTN   71 (214)
T ss_dssp             CSSCSEEEEEEEEEEE-----ET--TEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCC---CSCCCTTCCTTSCCCC
T ss_pred             CCCCCeEEEEecCccc-----cC--CeEEEEECCEeccCCCcchHHHHhhccccccccCCC---cccccccccccCCCCC
Confidence            4567889988554332     12  466899999999999999999988877776665532   2223  2222222334


Q ss_pred             CCcccceeeeEeecCCeEEEEEEeCCCC---CCCCCCccccCCceEEEEecCCcCCCCCCCCCCCCCCCCccceeEecCC
Q 013875          303 LGTSRATRLSKIAFNSTIELVLQDTNLL---TVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTG  379 (434)
Q Consensus       303 ~~~~~~~~~~~~~~g~~v~~vl~N~~~~---~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~  379 (434)
                      ...+.|+.++.++.|++|||+|+|.+.+   ....||||||||+||||+++.|.++.. ....+|+.+|+||||+.|+++
T Consensus        72 ~~~~~~t~v~~~~~g~~veivl~n~~~~~~~~~~~HP~HlHG~~F~vl~~~~g~~~~~-~~~~~n~~~p~~rDTv~v~~g  150 (214)
T d1aoza3          72 EKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAE-EESSLNLKNPPLRNTVVIFPY  150 (214)
T ss_dssp             TTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGG-GGGGSCCSSCCEESEEEECTT
T ss_pred             cccccCceeEEecCCCEEEEEEeccccccCCCCCCcceEeecceeEEeccCCCccccc-ccccccccCCceecCcccCCC
Confidence            5567889999999999999999997632   245799999999999999998888754 346788999999999999999


Q ss_pred             cEEEEEEEcCCceeeEEeecchhhHHccceeEEEEecCCCCCCCCCCCCCCCCCC
Q 013875          380 GWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGPGPDQSVLPPPTDLPPC  434 (434)
Q Consensus       380 g~v~irf~adnpG~w~~HCHil~H~d~GM~~~~~v~~~~~~~~~~~~~p~~~~~c  434 (434)
                      +|++|||++||||.|+||||+++|++.|||++|.|...     ++.++|.++++|
T Consensus       151 ~~~~ir~~adnpG~w~~HCH~~~H~~~GM~~~~~v~~~-----~~~~~P~~~~~c  200 (214)
T d1aoza3         151 GWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVE-----KVGRIPTKALAC  200 (214)
T ss_dssp             EEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECGG-----GCCCCCHHHHSS
T ss_pred             ceEEEEEecCCCeeEEEEECcHHHHhCcCcEEEEEccc-----cccCCCcccccc
Confidence            99999999999999999999999999999999987543     456789999998
>d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Back     information, alignment and structure
>d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1oe1a2 b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} Back     information, alignment and structure
>d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Back     information, alignment and structure
>d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId: 1108]} Back     information, alignment and structure
>d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Back     information, alignment and structure
>d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d1ibya_ b.6.1.4 (A:) Red copper protein nitrosocyanin {Nitrosomonas europaea [TaxId: 915]} Back     information, alignment and structure
>d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1fwxa1 b.6.1.4 (A:452-581) Nitrous oxide reductase, C-terminal domain {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1oe1a2 b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1qnia1 b.6.1.4 (A:451-581) Nitrous oxide reductase, C-terminal domain {Pseudomonas nautica [TaxId: 2743]} Back     information, alignment and structure
>d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1sddb1 b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} Back     information, alignment and structure
>d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d1mzya2 b.6.1.3 (A:194-371) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Back     information, alignment and structure
>d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Back     information, alignment and structure
>d2cuaa_ b.6.1.2 (A:) Cytochrome c oxidase {Thermus thermophilus, ba3 type [TaxId: 274]} Back     information, alignment and structure
>d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d2q5ba1 b.6.1.1 (A:1-105) Plastocyanin {Cyanobacterium (Phormidium laminosum) [TaxId: 32059]} Back     information, alignment and structure
>d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Back     information, alignment and structure
>d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Back     information, alignment and structure
>d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Back     information, alignment and structure
>d1mzya2 b.6.1.3 (A:194-371) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} Back     information, alignment and structure
>d1pcsa_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]} Back     information, alignment and structure
>d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d1bxua_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]} Back     information, alignment and structure
>d2plta_ b.6.1.1 (A:) Plastocyanin {Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]} Back     information, alignment and structure
>d1sddb1 b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1pmya_ b.6.1.1 (A:) Pseudoazurin {Methylobacterium extorquens, strain am1 [TaxId: 408]} Back     information, alignment and structure
>d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} Back     information, alignment and structure
>d2jxma1 b.6.1.1 (A:1-97) Plastocyanin {Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]} Back     information, alignment and structure
>d1ibya_ b.6.1.4 (A:) Red copper protein nitrosocyanin {Nitrosomonas europaea [TaxId: 915]} Back     information, alignment and structure
>d1plca_ b.6.1.1 (A:) Plastocyanin {Poplar (Populus nigra), variant italica [TaxId: 3691]} Back     information, alignment and structure
>d1paza_ b.6.1.1 (A:) Pseudoazurin {Alcaligenes faecalis, strain s-6 [TaxId: 511]} Back     information, alignment and structure
>d2ccwa1 b.6.1.1 (A:1-129) Azurin {Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]} Back     information, alignment and structure
>d1cuoa_ b.6.1.1 (A:) Azurin {Methylomonas sp. j [TaxId: 32038]} Back     information, alignment and structure
>d1nwpa_ b.6.1.1 (A:) Azurin {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d2ov0a1 b.6.1.1 (A:1-105) Amicyanin {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d2cj3a1 b.6.1.1 (A:1-105) Plastocyanin {Anabaena variabilis [TaxId: 1172]} Back     information, alignment and structure
>d1jzga_ b.6.1.1 (A:) Azurin {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1bqka_ b.6.1.1 (A:) Pseudoazurin {Achromobacter cycloclastes [TaxId: 223]} Back     information, alignment and structure
>d1iuza_ b.6.1.1 (A:) Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 3120]} Back     information, alignment and structure
>d1adwa_ b.6.1.1 (A:) Pseudoazurin {Thiosphaera pantotropha [TaxId: 82367]} Back     information, alignment and structure
>d1fwxa1 b.6.1.4 (A:452-581) Nitrous oxide reductase, C-terminal domain {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1bypa_ b.6.1.1 (A:) Plastocyanin {White campion (Silene pratensis) [TaxId: 52853]} Back     information, alignment and structure
>d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId: 1108]} Back     information, alignment and structure
>d1kdja_ b.6.1.1 (A:) Plastocyanin {Fern (Adiantum capillus-veneris) [TaxId: 13818]} Back     information, alignment and structure
>d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1id2a_ b.6.1.1 (A:) Amicyanin {Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]} Back     information, alignment and structure
>d1qnia1 b.6.1.4 (A:451-581) Nitrous oxide reductase, C-terminal domain {Pseudomonas nautica [TaxId: 2743]} Back     information, alignment and structure
>d2ccwa1 b.6.1.1 (A:1-129) Azurin {Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]} Back     information, alignment and structure
>d1cuoa_ b.6.1.1 (A:) Azurin {Methylomonas sp. j [TaxId: 32038]} Back     information, alignment and structure
>d1jzga_ b.6.1.1 (A:) Azurin {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nwpa_ b.6.1.1 (A:) Azurin {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d2cuaa_ b.6.1.2 (A:) Cytochrome c oxidase {Thermus thermophilus, ba3 type [TaxId: 274]} Back     information, alignment and structure
>d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1pmya_ b.6.1.1 (A:) Pseudoazurin {Methylobacterium extorquens, strain am1 [TaxId: 408]} Back     information, alignment and structure
>d1adwa_ b.6.1.1 (A:) Pseudoazurin {Thiosphaera pantotropha [TaxId: 82367]} Back     information, alignment and structure
>d1bqka_ b.6.1.1 (A:) Pseudoazurin {Achromobacter cycloclastes [TaxId: 223]} Back     information, alignment and structure
>d1cyxa_ b.6.1.2 (A:) Quinol oxidase (CyoA) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1w8oa1 b.1.18.2 (A:403-505) Sialidase, "linker" domain {Micromonospora viridifaciens [TaxId: 1881]} Back     information, alignment and structure