Citrus Sinensis ID: 013970

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430---

MGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLISLVGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPSV

cccccccHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHcccHHHHHHHHHHHHHHcccccccccccccccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccHHccccccccccHHHHHHHHHHccccHHHHHHHccccccccccccccHHHHHHHHccHHHHHHHHHHHHHHcccccccccccccccHHHHHHHcccccccccccccccccccccccccc

ccccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHccccEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHcHHHHHHHHHHHHcccccccccccccHHHHEHEEEHHcHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcEEEcccccHcEEEEEHHHHHHHHcHHHHHHcccccccccccccHHHHHHHHHHHHccHHHHHHHHHHHHcccccccccHHHHHccccHHHHHcccccccccccccccccccccccccc

mggsytfvpSTISIILAgrfsnysgdpvEKFKRTMRAIQGSLIVASTLQIVLGFSGLWrnvtrflsplsvvplislvgfglyefgfpgvakcveigLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVggayndaapktqascrtdraglidaapwirvpwpfqwgapsfdAGEAFAMMMASFVALVESTGAFFAVARyasatpmppsvlsrgvgwqGVGILLSGlfgtvngtsVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKfgavfasipAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIglsvpqyfneytaingfgpvhtsgrwfndmvnvpfssepfvAGCVAFFldntlhkkdgqvrkdrgrhwwdkfwsfkgdtrseefyslpfnlnkyfpsv

MGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFlsplsvvplislvGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPSV

****YTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLISLVGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKY****

*GGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLISLVGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKG***SEEFYSLPFNLNKYFPS*

ooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

oooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

ooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii

oooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooo

ooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		433	2.2.26 [Sep-21-2011]
Q27GI3		532	Nucleobase-ascorbate tran	yes	no	0.997	0.812	0.854	0.0
Q8RWE9		528	Nucleobase-ascorbate tran	no	no	0.997	0.818	0.799	0.0
Q0WPE9		538	Nucleobase-ascorbate tran	no	no	0.997	0.802	0.757	0.0
Q8VZQ5		539	Nucleobase-ascorbate tran	no	no	0.995	0.799	0.689	1e-180
Q94C70		524	Nucleobase-ascorbate tran	no	no	0.988	0.816	0.593	1e-145
P93039		526	Nucleobase-ascorbate tran	no	no	0.995	0.819	0.597	1e-144
Q41760		527	Nucleobase-ascorbate tran	N/A	no	0.997	0.819	0.565	1e-143
O04472		541	Putative nucleobase-ascor	no	no	0.986	0.789	0.530	1e-138
Q9SHZ3		520	Nucleobase-ascorbate tran	no	no	0.988	0.823	0.543	1e-132
Q8GZD4		551	Nucleobase-ascorbate tran	no	no	0.993	0.780	0.483	1e-115

>sp\|Q27GI3\|NAT6_ARATH Nucleobase-ascorbate transporter 6 OS=Arabidopsis thaliana GN=NAT6 PE=2 SV=2	Back alignment and function desciption

 Score =  770 bits (1989), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/433 (85%), Positives = 407/433 (93%), Gaps = 1/433 (0%)

Query: 1   MGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRN 60
           +G SYTFVP+TISIIL+GRFS+ S +P+++F+R MRA QG+LIVASTLQ++LGFSGLWRN
Sbjct: 101 VGASYTFVPTTISIILSGRFSDTS-NPIDRFERIMRATQGALIVASTLQMILGFSGLWRN 159

Query: 61  VTRFLSPLSVVPLISLVGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNI 120
           V RFLSP+S VPL+ LVGFGLYEFGFPGVAKC+EIGLP+L+I+VF+SQYLPHVIK GKN+
Sbjct: 160 VVRFLSPISAVPLVGLVGFGLYEFGFPGVAKCIEIGLPELLILVFVSQYLPHVIKSGKNV 219

Query: 121 FDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWG 180
           FDRFAVIF+VVIVWIYAHLLTVGGAYN AAP TQ SCRTDRAG+I AAPWIRVPWPFQWG
Sbjct: 220 FDRFAVIFAVVIVWIYAHLLTVGGAYNGAAPTTQTSCRTDRAGIIGAAPWIRVPWPFQWG 279

Query: 181 APSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGL 240
           APSFDAGEAFAMMMASFVALVESTGAF AV+RYASAT +PPS+LSRG+GWQGV IL+SGL
Sbjct: 280 APSFDAGEAFAMMMASFVALVESTGAFVAVSRYASATMLPPSILSRGIGWQGVAILISGL 339

Query: 241 FGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALY 300
           FGT  G+SVSVENAGLLALTRVGSRRVVQI+AGFMIFFS+LGKFGAVFASIPAPI+AALY
Sbjct: 340 FGTGAGSSVSVENAGLLALTRVGSRRVVQIAAGFMIFFSILGKFGAVFASIPAPIIAALY 399

Query: 301 CLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGR 360
           CLFFAYVGAGGLSFLQFCNLNSFR KFILGFS+F+GLS+PQYFNEYTAI G+GPVHT  R
Sbjct: 400 CLFFAYVGAGGLSFLQFCNLNSFRTKFILGFSVFLGLSIPQYFNEYTAIKGYGPVHTGAR 459

Query: 361 WFNDMVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFY 420
           WFNDMVNVPFSSEPFVAG VAFFLDNTLHKKD  +RKDRG+HWWDKF SFKGDTRSEEFY
Sbjct: 460 WFNDMVNVPFSSEPFVAGSVAFFLDNTLHKKDSSIRKDRGKHWWDKFRSFKGDTRSEEFY 519

Query: 421 SLPFNLNKYFPSV 433
           SLPFNLNKYFPSV
Sbjct: 520 SLPFNLNKYFPSV 532

Arabidopsis thaliana (taxid: 3702)

>sp\|Q8RWE9\|NAT5_ARATH Nucleobase-ascorbate transporter 5 OS=Arabidopsis thaliana GN=NAT5 PE=2 SV=1	Back alignment and function description

>sp\|Q0WPE9\|NAT7_ARATH Nucleobase-ascorbate transporter 7 OS=Arabidopsis thaliana GN=NAT7 PE=2 SV=2	Back alignment and function description

>sp\|Q8VZQ5\|NAT8_ARATH Nucleobase-ascorbate transporter 8 OS=Arabidopsis thaliana GN=NAT8 PE=2 SV=1	Back alignment and function description

>sp\|Q94C70\|NAT2_ARATH Nucleobase-ascorbate transporter 2 OS=Arabidopsis thaliana GN=NAT2 PE=2 SV=2	Back alignment and function description

>sp\|P93039\|NAT4_ARATH Nucleobase-ascorbate transporter 4 OS=Arabidopsis thaliana GN=NAT4 PE=2 SV=2	Back alignment and function description

>sp\|Q41760\|LPE1_MAIZE Nucleobase-ascorbate transporter LPE1 OS=Zea mays GN=LPE1 PE=1 SV=2	Back alignment and function description

>sp\|O04472\|NAT10_ARATH Putative nucleobase-ascorbate transporter 10 OS=Arabidopsis thaliana GN=NAT10 PE=3 SV=2	Back alignment and function description

>sp\|Q9SHZ3\|NAT1_ARATH Nucleobase-ascorbate transporter 1 OS=Arabidopsis thaliana GN=NAT1 PE=2 SV=1	Back alignment and function description

>sp\|Q8GZD4\|NAT3_ARATH Nucleobase-ascorbate transporter 3 OS=Arabidopsis thaliana GN=NAT3 PE=2 SV=2	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		433
255540763		531	purine permease, putative [Ricinus commu	0.997	0.813	0.879	0.0
224121656		529	nucleobase ascorbate transporter [Populu	0.997	0.816	0.877	0.0
225457114		531	PREDICTED: nucleobase-ascorbate transpor	0.997	0.813	0.872	0.0
224135763		528	nucleobase ascorbate transporter [Populu	0.997	0.818	0.866	0.0
449440700		530	PREDICTED: nucleobase-ascorbate transpor	0.997	0.815	0.859	0.0
356516694		531	PREDICTED: nucleobase-ascorbate transpor	0.997	0.813	0.856	0.0
356508649		531	PREDICTED: nucleobase-ascorbate transpor	0.997	0.813	0.859	0.0
15241994		532	nucleobase-ascorbate transporter 6 [Arab	0.997	0.812	0.854	0.0
297793879		532	hypothetical protein ARALYDRAFT_496474 [	0.997	0.812	0.852	0.0
356562759		533	PREDICTED: nucleobase-ascorbate transpor	0.997	0.810	0.824	0.0

>gi\|255540763\|ref\|XP_002511446.1\| purine permease, putative [Ricinus communis] gi\|223550561\|gb\|EEF52048.1\| purine permease, putative [Ricinus communis]	Back alignment and taxonomy information

 Score =  790 bits (2041), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/433 (87%), Positives = 412/433 (95%), Gaps = 1/433 (0%)

Query: 1   MGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRN 60
           +GGSYTFVP+TISIILAGRFS+ + DP E+FK  MRAIQGSLIVASTLQIVLGFSGLWRN
Sbjct: 100 IGGSYTFVPTTISIILAGRFSDAT-DPEERFKSIMRAIQGSLIVASTLQIVLGFSGLWRN 158

Query: 61  VTRFLSPLSVVPLISLVGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNI 120
           VTRFLSPLS VPL++LVGFGLYE GFPGVAKCVEIGLP+L+I+VF+SQY+PHVIK  +++
Sbjct: 159 VTRFLSPLSAVPLVALVGFGLYELGFPGVAKCVEIGLPELIILVFVSQYMPHVIKSRRHV 218

Query: 121 FDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWG 180
           FDRFAVIFS+VIVWIYAHLLTVGGAYNDAAPKTQ +CRTDRAGLIDAAPWIRVP+PFQWG
Sbjct: 219 FDRFAVIFSIVIVWIYAHLLTVGGAYNDAAPKTQNTCRTDRAGLIDAAPWIRVPYPFQWG 278

Query: 181 APSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGL 240
           APSFDAGEAFAMMMASFVALVESTGAF AV+RYASATPMPPSVLSRG+GWQGV ILLSGL
Sbjct: 279 APSFDAGEAFAMMMASFVALVESTGAFIAVSRYASATPMPPSVLSRGIGWQGVAILLSGL 338

Query: 241 FGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALY 300
           FGTVN +SVSVENAGLLALTRVGSRRVVQISAGFMIFFS+LGKFGAVFASIPAPI+AALY
Sbjct: 339 FGTVNASSVSVENAGLLALTRVGSRRVVQISAGFMIFFSILGKFGAVFASIPAPIIAALY 398

Query: 301 CLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGR 360
           CLFFAYVG GGLSFLQFCNLNSFR KFILGFSIF+GLS+PQYFNEYTAING+GPVHT GR
Sbjct: 399 CLFFAYVGVGGLSFLQFCNLNSFRTKFILGFSIFLGLSIPQYFNEYTAINGYGPVHTGGR 458

Query: 361 WFNDMVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFY 420
           WFND+VNVPFSSE FVAGCVA+FLDNTLH+KD  +RKDRG+HWWDKF SFKGD RSEEFY
Sbjct: 459 WFNDIVNVPFSSEAFVAGCVAYFLDNTLHRKDSSIRKDRGKHWWDKFRSFKGDIRSEEFY 518

Query: 421 SLPFNLNKYFPSV 433
           SLPFNLNKYFPSV
Sbjct: 519 SLPFNLNKYFPSV 531

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|224121656\|ref\|XP_002318639.1\| nucleobase ascorbate transporter [Populus trichocarpa] gi\|222859312\|gb\|EEE96859.1\| nucleobase ascorbate transporter [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|225457114\|ref\|XP_002283469.1\| PREDICTED: nucleobase-ascorbate transporter 6 [Vitis vinifera] gi\|297733828\|emb\|CBI15075.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|224135763\|ref\|XP_002322154.1\| nucleobase ascorbate transporter [Populus trichocarpa] gi\|222869150\|gb\|EEF06281.1\| nucleobase ascorbate transporter [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|449440700\|ref\|XP_004138122.1\| PREDICTED: nucleobase-ascorbate transporter 6-like [Cucumis sativus] gi\|449477394\|ref\|XP_004155010.1\| PREDICTED: nucleobase-ascorbate transporter 6-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|356516694\|ref\|XP_003527028.1\| PREDICTED: nucleobase-ascorbate transporter 6-like isoform 1 [Glycine max] gi\|356516696\|ref\|XP_003527029.1\| PREDICTED: nucleobase-ascorbate transporter 6-like isoform 2 [Glycine max]	Back alignment and taxonomy information

>gi\|356508649\|ref\|XP_003523067.1\| PREDICTED: nucleobase-ascorbate transporter 6-like [Glycine max]	Back alignment and taxonomy information

>gi|15241994|ref|NP_201094.1| nucleobase-ascorbate transporter 6 [Arabidopsis thaliana] gi|79600443|ref|NP_851251.2| nucleobase-ascorbate transporter 6 [Arabidopsis thaliana] gi|145323680|ref|NP_001032127.2| nucleobase-ascorbate transporter 6 [Arabidopsis thaliana] gi|122064607|sp|Q27GI3.2|NAT6_ARATH RecName: Full=Nucleobase-ascorbate transporter 6; Short=AtNAT6 gi|21326025|gb|AAM47573.1|AF466198_1 putative permease 1 [Arabidopsis thaliana] gi|10177467|dbj|BAB10858.1| permease 1 [Arabidopsis thaliana] gi|332010285|gb|AED97668.1| nucleobase-ascorbate transporter 6 [Arabidopsis thaliana] gi|332010286|gb|AED97669.1| nucleobase-ascorbate transporter 6 [Arabidopsis thaliana] gi|332010287|gb|AED97670.1| nucleobase-ascorbate transporter 6 [Arabidopsis thaliana]

Back alignment and taxonomy information

>gi\|297793879\|ref\|XP_002864824.1\| hypothetical protein ARALYDRAFT_496474 [Arabidopsis lyrata subsp. lyrata] gi\|297310659\|gb\|EFH41083.1\| hypothetical protein ARALYDRAFT_496474 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|356562759\|ref\|XP_003549636.1\| PREDICTED: nucleobase-ascorbate transporter 6-like [Glycine max]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		433
TAIR\|locus:2170783		532	AT5G62890 [Arabidopsis thalian	0.997	0.812	0.833	1.2e-200
TAIR\|locus:2158829		528	AT5G49990 [Arabidopsis thalian	0.997	0.818	0.778	6.2e-188
TAIR\|locus:2202700		538	NAT7 "nucleobase-ascorbate tra	0.997	0.802	0.736	7.3e-178
TAIR\|locus:2194631		539	NAT8 "nucleobase-ascorbate tra	0.995	0.799	0.671	3.5e-162
TAIR\|locus:2031085		526	AT1G49960 [Arabidopsis thalian	0.995	0.819	0.578	8.5e-136
TAIR\|locus:2040874		524	AT2G34190 [Arabidopsis thalian	0.988	0.816	0.580	4.4e-132
TAIR\|locus:2034104		541	AT1G65550 [Arabidopsis thalian	0.983	0.787	0.518	2.1e-123
TAIR\|locus:2060076		520	AT2G05760 [Arabidopsis thalian	0.988	0.823	0.530	5.2e-120
TAIR\|locus:2066190		551	PDE135 "pigment defective embr	0.993	0.780	0.467	3.9e-108
TAIR\|locus:2120953		709	AT4G38050 [Arabidopsis thalian	0.632	0.386	0.332	6.2e-62

TAIR\|locus:2170783 AT5G62890 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1942 (688.7 bits), Expect = 1.2e-200, P = 1.2e-200
 Identities = 361/433 (83%), Positives = 396/433 (91%)

Query:     1 MGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRN 60
             +G SYTFVP+TISIIL+GRFS+ S +P+++F+R MRA QG+LIVASTLQ++LGFSGLWRN
Sbjct:   101 VGASYTFVPTTISIILSGRFSDTS-NPIDRFERIMRATQGALIVASTLQMILGFSGLWRN 159

Query:    61 VTRFXXXXXXXXXXXXXGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNI 120
             V RF             GFGLYEFGFPGVAKC+EIGLP+L+I+VF+SQYLPHVIK GKN+
Sbjct:   160 VVRFLSPISAVPLVGLVGFGLYEFGFPGVAKCIEIGLPELLILVFVSQYLPHVIKSGKNV 219

Query:   121 FDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWG 180
             FDRFAVIF+VVIVWIYAHLLTVGGAYN AAP TQ SCRTDRAG+I AAPWIRVPWPFQWG
Sbjct:   220 FDRFAVIFAVVIVWIYAHLLTVGGAYNGAAPTTQTSCRTDRAGIIGAAPWIRVPWPFQWG 279

Query:   181 APSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGL 240
             APSFDAGEAFAMMMASFVALVESTGAF AV+RYASAT +PPS+LSRG+GWQGV IL+SGL
Sbjct:   280 APSFDAGEAFAMMMASFVALVESTGAFVAVSRYASATMLPPSILSRGIGWQGVAILISGL 339

Query:   241 FGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALY 300
             FGT  G+SVSVENAGLLALTRVGSRRVVQI+AGFMIFFS+LGKFGAVFASIPAPI+AALY
Sbjct:   340 FGTGAGSSVSVENAGLLALTRVGSRRVVQIAAGFMIFFSILGKFGAVFASIPAPIIAALY 399

Query:   301 CLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGR 360
             CLFFAYVGAGGLSFLQFCNLNSFR KFILGFS+F+GLS+PQYFNEYTAI G+GPVHT  R
Sbjct:   400 CLFFAYVGAGGLSFLQFCNLNSFRTKFILGFSVFLGLSIPQYFNEYTAIKGYGPVHTGAR 459

Query:   361 WFNDMVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFY 420
             WFNDMVNVPFSSEPFVAG VAFFLDNTLHKKD  +RKDRG+HWWDKF SFKGDTRSEEFY
Sbjct:   460 WFNDMVNVPFSSEPFVAGSVAFFLDNTLHKKDSSIRKDRGKHWWDKFRSFKGDTRSEEFY 519

Query:   421 SLPFNLNKYFPSV 433
             SLPFNLNKYFPSV
Sbjct:   520 SLPFNLNKYFPSV 532

GO:0005215 "transporter activity" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006810 "transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA;ISS

GO:0022857 "transmembrane transporter activity" evidence=ISS

GO:0055085 "transmembrane transport" evidence=IEA

GO:0005773 "vacuole" evidence=IDA

GO:0005618 "cell wall" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

TAIR\|locus:2158829 AT5G49990 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2202700 NAT7 "nucleobase-ascorbate transporter 7" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2194631 NAT8 "nucleobase-ascorbate transporter 8" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2031085 AT1G49960 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2040874 AT2G34190 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2034104 AT1G65550 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2060076 AT2G05760 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2066190 PDE135 "pigment defective embryo 135" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2120953 AT4G38050 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q41760	LPE1_MAIZE	No assigned EC number	0.5658	0.9976	0.8197	N/A	no
Q8RWE9	NAT5_ARATH	No assigned EC number	0.7990	0.9976	0.8181	no	no
Q27GI3	NAT6_ARATH	No assigned EC number	0.8545	0.9976	0.8120	yes	no
Q0WPE9	NAT7_ARATH	No assigned EC number	0.7575	0.9976	0.8029	no	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	eugene3.00120713	nucleobase ascorbate transporter (529 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	eugene3.31020001	Predicted protein (123 aa)	•	0.492

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		433
pfam00860		389	pfam00860, Xan_ur_permease, Permease family	9e-43
COG2233		451	COG2233, UraA, Xanthine/uracil permeases [Nucleoti	6e-33
TIGR03173		406	TIGR03173, pbuX, xanthine permease	3e-32
TIGR00801		412	TIGR00801, ncs2, uracil-xanthine permease	1e-22
PRK10720		428	PRK10720, PRK10720, uracil transporter; Provisiona	8e-11
TIGR03616		429	TIGR03616, RutG, pyrimidine utilization transport	4e-07
PRK11412		433	PRK11412, PRK11412, putative uracil/xanthine trans	9e-06

>gnl\|CDD\|216158 pfam00860, Xan_ur_permease, Permease family	Back alignment and domain information

 Score =  154 bits (391), Expect = 9e-43
 Identities = 86/317 (27%), Positives = 150/317 (47%), Gaps = 24/317 (7%)

Query: 34  TMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLISLVGFGLYEFGFPGVAKCV 93
            +  + G+++VA  L  ++ F+GL   + R   P+   P++ L+G  L      G     
Sbjct: 88  ALAGLFGAVLVAGVLFTLISFTGLRGRLARLFPPVVTGPVVLLIGLSLAPIAVKGAGGGW 147

Query: 94  EIGLPQLVIIVF---ISQYLPHVI----KRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAY 146
            I     V ++    ++  +  VI       K  F +  ++  ++  W+ A  + +    
Sbjct: 148 AIADGLTVGLLDLLGLAVVVLAVILLLSVFLKGFFRQGPILIGIIAGWLLALFMGI---- 203

Query: 147 NDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGA 206
                        + +  +  APW ++P PF +G P F+ G    ++  + VA+VESTG 
Sbjct: 204 ------------VNFSPEVMDAPWFQLPHPFPFGTPLFNPGLILTVLAVALVAIVESTGD 251

Query: 207 FFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRR 266
             AVA+ +     P   L RG+   G+  LLSGLFG    T+   EN G++ALT+V SRR
Sbjct: 252 IRAVAKVSGRDLKPKPDLRRGLLADGLATLLSGLFGAF-PTTTYAENIGVVALTKVYSRR 310

Query: 267 VVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVK 326
           V   +   +I   ++ KF A+F+SIP+P++  +  + F  +   G+S L   +L+S R  
Sbjct: 311 VGVTAGVILILLGLIPKFAALFSSIPSPVLGGVMLVMFGMIAGSGVSNLITVDLDSARNL 370

Query: 327 FILGFSIFIGLSVPQYF 343
            I+  S+ +GL +    
Sbjct: 371 LIIAVSLVLGLGISTVP 387

This family includes permeases for diverse substrates such as xanthine, uracil, and vitamin C. However many members of this family are functionally uncharacterized and may transport other substrates. Members of this family have ten predicted transmembrane helices. Length = 389

>gnl\|CDD\|225142 COG2233, UraA, Xanthine/uracil permeases [Nucleotide transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|234136 TIGR03173, pbuX, xanthine permease	Back alignment and domain information

>gnl\|CDD\|233133 TIGR00801, ncs2, uracil-xanthine permease	Back alignment and domain information

>gnl\|CDD\|236744 PRK10720, PRK10720, uracil transporter; Provisional	Back alignment and domain information

>gnl\|CDD\|132655 TIGR03616, RutG, pyrimidine utilization transport protein G	Back alignment and domain information

>gnl\|CDD\|183124 PRK11412, PRK11412, putative uracil/xanthine transporter; Provisional	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		433
KOG1292		510	consensus Xanthine/uracil transporters [Nucleotide	100.0
COG2233		451	UraA Xanthine/uracil permeases [Nucleotide transpo	100.0
PRK11412		433	putative uracil/xanthine transporter; Provisional	100.0
PRK10720		428	uracil transporter; Provisional	100.0
TIGR03616		429	RutG pyrimidine utilization transport protein G. T	100.0
TIGR03173		406	pbuX xanthine permease. All the seed members of th	100.0
TIGR00801		415	ncs2 uracil-xanthine permease. NCS2 family appears	100.0
PF00860		389	Xan_ur_permease: Permease family; InterPro: IPR006	100.0
COG2252		436	Xanthine/uracil/vitamin C permease [Nucleotide tra	99.93
COG0659		554	SUL1 Sulfate permease and related transporters (MF	99.86
TIGR00815		563	sulP high affinity sulphate transporter 1. (2) SO4	99.74
TIGR00843		395	benE benzoate transporter. The benzoate transporte	99.74
PRK11660		568	putative transporter; Provisional	99.73
PF03594		378	BenE: Benzoate membrane transport protein; InterPr	99.67
PF00916		280	Sulfate_transp: Sulfate transporter family; InterP	99.6
COG3135		402	BenE Uncharacterized protein involved in benzoate	99.52
KOG0236		665	consensus Sulfate/bicarbonate/oxalate exchanger SA	99.32
TIGR00834		900	ae anion exchange protein. They preferentially cat	97.88
KOG1172		876	consensus Na+-independent Cl/HCO3 exchanger AE1 an	97.58
PF11840		492	DUF3360: Protein of unknown function (DUF3360); In	97.29
PF00955		510	HCO3_cotransp: HCO3- transporter family Only parti	93.99
COG0659		554	SUL1 Sulfate permease and related transporters (MF	88.02
TIGR00815		563	sulP high affinity sulphate transporter 1. (2) SO4	84.51
KOG4085		175	consensus Uncharacterized conserved protein [Funct	83.05
PRK11660		568	putative transporter; Provisional	81.96

>KOG1292 consensus Xanthine/uracil transporters [Nucleotide transport and metabolism]	Back alignment and domain information

Probab=100.00  E-value=6.7e-79  Score=614.82  Aligned_cols=425  Identities=59%  Similarity=1.079  Sum_probs=400.3

Q ss_pred             CCCccccHHHHHHHHhccCCCCCC---CCChhhHhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCcccHHHHHHHH
Q 013970            1 MGGSYTFVPSTISIILAGRFSNYS---GDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLISLV   77 (433)
Q Consensus         1 ~G~Sfafl~~~~~i~~~~~~~~~~---~~~~~~~~~g~~~~~ga~lvsGll~illg~~gl~~~l~~~~pp~V~G~~i~lI   77 (433)
                      ||+||||++|.++|.+.+.+.|..   +.++++|++.+++++||+++++++++++|++|+.+++.|++.|+.+.+++.++
T Consensus        77 ~G~Sfafl~p~~~i~~~~~~~~~~~~~~~~~~~~~~~mr~iqGAlivas~vqiilG~sGl~g~l~rfi~Plti~P~v~lv  156 (510)
T KOG1292|consen   77 QGPSFAFLPPALAIISLPRFTCITTPHETDTERFQHRMREIQGALIVASLVQIILGFSGLWGNLLRFIGPLTIVPLVALV  156 (510)
T ss_pred             cccceehhhHHHHHHhccccCCCCCcccchhHHHHHHHHHhcchHHHHHHHHHHHhhhhhHHHHHhhcCChhhhhHHHHH
Confidence            799999999999999966555542   22356999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhHhhhccccchhhhHHHHHHHHHHHHHh--hhcccc--cCccccchhhHHHHHHHHHHHHHHHHhccCCCCCCccc
Q 013970           78 GFGLYEFGFPGVAKCVEIGLPQLVIIVFISQY--LPHVIK--RGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKT  153 (433)
Q Consensus        78 Gl~l~~~~~~~~~~~~~i~l~~l~~~i~l~~~--~~~~~~--~~~~~l~~~siLigivvG~~~a~~~g~~~~~~~~~~~~  153 (433)
                      |++++..+.+.++.+|.++++.+++.+++++|  .++...  .+++.++++++++++.+.|++|.+++.+|.||..+..|
T Consensus       157 gl~l~~~~~~~~~~~weI~l~~~llli~fsqy~~~~~~~~~~~~~~if~~f~vll~i~ivW~~~~iLT~tgay~~~~~~t  236 (510)
T KOG1292|consen  157 GLGLFQDGFPKLGKHWEISLPEILLLILFSQYASLPKKGFGSRRIQIFSRFPVLLAIAIVWLYCFILTITGAYPYKPTTT  236 (510)
T ss_pred             hhhhHHhhhhhhhhheeecHHHHHHHHHHHHhhhcccccccccccchHhhccHHHHHHHHHHHHHHHHhccccCCCcccc
Confidence            99999999999999999999999999999999  533322  34678999999999999999999999999999888889


Q ss_pred             ccccccCcccccCCCCcccccccccccccccCHHHHHHHHHHHHHHHHHhHhHHHHHHhhhCCCCCCCccCCccchhhhh
Q 013970          154 QASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGV  233 (433)
Q Consensus       154 ~~~~~vd~~~~v~~ap~~~~P~~~~~g~P~f~~~~i~~~~~~~lv~~~esig~~~av~~~~~~~~~~~~~i~r~l~~dGl  233 (433)
                      |.+||+|.+.++.++||+.+|+|++||.|.||++....++...++.++||+|++.+++|.+..++++++.+|||+..||+
T Consensus       237 ~~~~RTD~~~vi~~apWi~vPyP~QwG~P~f~~~~~f~m~aa~~va~iES~G~y~a~ar~~~a~ppP~~~inRgi~~eGi  316 (510)
T KOG1292|consen  237 QSSCRTDRNGVISSAPWIRVPYPFQWGPPTFSAGLVFAMMAASLVAMIESTGDYIACARLSSATPPPPSVLNRGIGWEGI  316 (510)
T ss_pred             CCcccccHhhhhccCCceeecCCCccCCCcccHHHHHHHHHHHHHHHHHhcchHHHHHHHhcCCCCChhhhhhhhhhhhH
Confidence            99999999988899999999999999999999999999999999999999999999999999888888999999999999


Q ss_pred             HHHHhhhcCCCCCccccccchhhhhhccCCcchHHHHHHHHHHHHHHhhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhhh
Q 013970          234 GILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLS  313 (433)
Q Consensus       234 ~s~laglfG~~~~tt~~~en~g~i~~Tgv~SR~~~~~ag~~lillg~~Pk~~al~~~IP~~Vlgg~liv~fg~i~~~Gi~  313 (433)
                      +++++|+||+..++|.++||+|+++.||++||++++++|+|||++|++.||+|++++||.|++||+++++|+++...|++
T Consensus       317 g~lL~gl~G~gtG~Tt~~ENigll~vTKVgSRrvvQ~aa~fmI~~~i~gKFgA~fAsIP~piv~~l~c~~~~mv~avgLS  396 (510)
T KOG1292|consen  317 GSLLAGLFGTGTGSTTSVENIGLLGVTKVGSRRVVQIAAGFMIFFGIFGKFGAFFASIPDPIVGGLLCILFGMVGAVGLS  396 (510)
T ss_pred             HHHHHHhhCCCccceeeccceeeEeeeeeeeeeehhhhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHhhh
Confidence            99999999999998888899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhcCcCCCccceeehhhHHHhhhhhhhHhhhhhhhcCCCCcccccccccccccccccccchhHHHHHHHHHhhcCCCCc
Q 013970          314 FLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNTLHKKDG  393 (433)
Q Consensus       314 ~l~~v~~~~~Rn~~ivg~sl~~Gl~~p~~~~~~~~~~~~~~~~~~~~~lp~~~~~~l~sgi~~g~l~ai~Ln~~~~~~~~  393 (433)
                      +++.+|+++.||.+|+|+|+++|+.+|+||+++     -+|.+|+.+|+++.++.++++.+.+|+++|++||++.|+.  
T Consensus       397 nLQf~dlns~RNl~IlG~Sif~gLsip~yF~~~-----~~~v~Tg~~~~d~ilnvll~~~m~Vggi~A~~LDnt~~ga--  469 (510)
T KOG1292|consen  397 NLQFVDLNSSRNLFILGFSIFLGLSIPQYFEQY-----PGPVHTGNGWFDDILNVLLSSRMLVGGILAFILDNTLPGA--  469 (510)
T ss_pred             hheeeccccccchhhhhHHHHHhccHHHHHHhC-----CCccccCcHHHHHHHHHHhhHHHHHHHHHhhhccccCCCC--
Confidence            999999999999999999999999999999995     3479999999999999999999999999999999999952  


Q ss_pred             chhhcccccccccccccCCCCCccccccCCccCccCCCCC
Q 013970          394 QVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPSV  433 (433)
Q Consensus       394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  433 (433)
                       +|||||+++|++.++.+.|.|.+++|+||+++||+|++.
T Consensus       470 -tr~~RG~~~w~~~~~~~~d~~~~e~Y~lP~~~n~~f~~~  508 (510)
T KOG1292|consen  470 -TREQRGLRWWDKFETFNGDVRNEEFYSLPFNLNRFFPRI  508 (510)
T ss_pred             -ChHhcCCcchhccccccCCccccccccCcHHHHhhcccC
Confidence             699999999999999999999999999999999999974

>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]	Back alignment and domain information

>PRK11412 putative uracil/xanthine transporter; Provisional	Back alignment and domain information

>PRK10720 uracil transporter; Provisional	Back alignment and domain information

>TIGR03616 RutG pyrimidine utilization transport protein G	Back alignment and domain information

>TIGR03173 pbuX xanthine permease	Back alignment and domain information

>TIGR00801 ncs2 uracil-xanthine permease	Back alignment and domain information

>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters []	Back alignment and domain information

>COG2252 Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism]	Back alignment and domain information

>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]	Back alignment and domain information

>TIGR00815 sulP high affinity sulphate transporter 1	Back alignment and domain information

>TIGR00843 benE benzoate transporter	Back alignment and domain information

>PRK11660 putative transporter; Provisional	Back alignment and domain information

>PF03594 BenE: Benzoate membrane transport protein; InterPro: IPR004711 The benzoate:H+ symporter (BenE) family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter [, ]	Back alignment and domain information

>PF00916 Sulfate_transp: Sulfate transporter family; InterPro: IPR011547 A number of proteins involved in the transport of sulphate across a membrane as well as some yet uncharacterised proteins have been shown [, ] to be evolutionary related	Back alignment and domain information

>COG3135 BenE Uncharacterized protein involved in benzoate metabolism [Secondary metabolites biosynthesis, transport, and catabolism]	Back alignment and domain information

>KOG0236 consensus Sulfate/bicarbonate/oxalate exchanger SAT-1 and related transporters (SLC26 family) [Inorganic ion transport and metabolism]	Back alignment and domain information

>TIGR00834 ae anion exchange protein	Back alignment and domain information

>KOG1172 consensus Na+-independent Cl/HCO3 exchanger AE1 and related transporters (SLC4 family) [Inorganic ion transport and metabolism]	Back alignment and domain information

>PF11840 DUF3360: Protein of unknown function (DUF3360); InterPro: IPR021794 This family of proteins are functionally uncharacterised	Back alignment and domain information

>PF00955 HCO3_cotransp: HCO3- transporter family Only partial structure; InterPro: IPR011531 Bicarbonate (HCO3 -) transport mechanisms are the principal regulators of pH in animal cells	Back alignment and domain information

>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]	Back alignment and domain information

>TIGR00815 sulP high affinity sulphate transporter 1	Back alignment and domain information

>KOG4085 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>PRK11660 putative transporter; Provisional	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		433
3qe7_A		429	Crystal Structure Of Uracil Transporter--Uraa Lengt		6e-10

>pdb|3QE7|A Chain A, Crystal Structure Of Uracil Transporter--Uraa Length = 429

Back alignment and structure

Iteration: 1

Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 5/156 (3%) Query: 163 GLIDAAPWIRVPW---PFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPM 219 G++D P I W P + P F+ ++ A+ V + E G A + Sbjct: 200 GIVDTTPIINAHWFALPTLY-TPRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLL 258 Query: 220 PPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFS 279 L R + G+ ++SG FG+ T+ EN G++A+TRV S V+ +A F I S Sbjct: 259 RDPGLHRSMFANGLSTVISGFFGSTPNTTYG-ENIGVMAITRVYSTWVIGGAAIFAILLS 317 Query: 280 VLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFL 315 +GK A IP P++ + L + +GA G+ L Sbjct: 318 CVGKLAAAIQMIPLPVMGGVSLLLYGVIGASGIRVL 353 Database: pdbaa

PyMOL of 3qe7

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		433
3qe7_A		429	Uracil permease; uracil transporter, URAA, transpo	8e-28

>3qe7_A Uracil permease; uracil transporter, URAA, transporter, INNE membrane protein, transport protein; HET: BNG; 2.78A {Escherichia coli} Length = 429	Back alignment and structure

 Score =  113 bits (285), Expect = 8e-28
 Identities = 66/360 (18%), Positives = 128/360 (35%), Gaps = 70/360 (19%)

Query: 1   MGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGF---SGL 57
           +G S+ F+   + ++  G                     G  I+   L  ++ F      
Sbjct: 69  LGSSFAFISPVLLLLPLG----------------YEVALGGFIMCGVLFCLVSFIVKKAG 112

Query: 58  WRNVTRFLSPLSVVPLISLVGFGL-----------YEFGFPGVAKCVEIGLPQLVIIVFI 106
              +     P ++  +++++G  L              G    +K + I +  L + V  
Sbjct: 113 TGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPAEGQTPDSKTIIISITTLAVTVLG 172

Query: 107 SQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLID 166
           S          +       ++  V++ +  +  +                      G++D
Sbjct: 173 SVL-------FRGFLAIIPILIGVLVGYALSFAM----------------------GIVD 203

Query: 167 -----AAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPP 221
                 A W  +P  +    P F+      ++ A+ V + E  G     A       +  
Sbjct: 204 TTPIINAHWFALPTLY---TPRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLLRD 260

Query: 222 SVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVL 281
             L R +   G+  ++SG FG+   T+   EN G++A+TRV S  V+  +A F I  S +
Sbjct: 261 PGLHRSMFANGLSTVISGFFGSTPNTTYG-ENIGVMAITRVYSTWVIGGAAIFAILLSCV 319

Query: 282 GKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQF--CNLNSFRVKFILGFSIFIGLSV 339
           GK  A    IP P++  +  L +  +GA G+  L     + N  +   +    + IG+S 
Sbjct: 320 GKLAAAIQMIPLPVMGGVSLLLYGVIGASGIRVLIESKVDYNKAQNLILTSVILIIGVSG 379

PyMOL of 3qe7

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		433
3qe7_A		429	Uracil permease; uracil transporter, URAA, transpo	100.0

>3qe7_A Uracil permease; uracil transporter, URAA, transporter, INNE membrane protein, transport protein; HET: BNG; 2.78A {Escherichia coli}	Back alignment and structure

Probab=100.00  E-value=1.4e-58  Score=478.16  Aligned_cols=335  Identities=20%  Similarity=0.328  Sum_probs=291.5

Q ss_pred             CCCccccHHHHHHHHhccCCCCCCCCChhhHhhhHHHHHHHHHHHHHHHHHHHhh--hhH-HHHHHhcCcccHHHHHHHH
Q 013970            1 MGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFS--GLW-RNVTRFLSPLSVVPLISLV   77 (433)
Q Consensus         1 ~G~Sfafl~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~ga~lvsGll~illg~~--gl~-~~l~~~~pp~V~G~~i~lI   77 (433)
                      ||+||+|++|+.++.+ +               +|++++|+++++|+++++++++  +++ +|++|+|||+|+|.++++|
T Consensus        69 ~G~sfafi~~~~~i~~-~---------------g~~~~~gavi~aGli~ill~~~~~~~g~~~l~~~~PpvviG~~i~~I  132 (429)
T 3qe7_A           69 LGSSFAFISPVLLLLP-L---------------GYEVALGGFIMCGVLFCLVSFIVKKAGTGWLDVLFPPAAMGAIVAVI  132 (429)
T ss_dssp             EEECGGGHHHHHHHGG-G---------------CHHHHHHHHHHHHHHHHHHHHHHHTTCSHHHHHHCCHHHHHHHHHHH
T ss_pred             ecChHHHHHHHHHHHh-c---------------CHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCCCeeeHHHHHHH
Confidence            6899999999998875 2               5899999999999999999987  544 7999999999999999999


Q ss_pred             HHHhhHhhhcccc-----------chhhhHHHHHHHHHHHHHhhhcccccCccccchhhHHHHHHHHHHHHHHHHhccCC
Q 013970           78 GFGLYEFGFPGVA-----------KCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAY  146 (433)
Q Consensus        78 Gl~l~~~~~~~~~-----------~~~~i~l~~l~~~i~l~~~~~~~~~~~~~~l~~~siLigivvG~~~a~~~g~~~~~  146 (433)
                      |+++++.++++.+           .++.+++.++++++++.++.       |+++|++++|+|+++||++++.+|..   
T Consensus       133 Gl~l~~~~~~~~~~~~~~~~~~~~~~~~la~~tl~iii~~~~~~-------kg~~~~~aiLigivvg~~~a~~~G~~---  202 (429)
T 3qe7_A          133 GLELAGVAAGMAGLLPAEGQTPDSKTIIISITTLAVTVLGSVLF-------RGFLAIIPILIGVLVGYALSFAMGIV---  202 (429)
T ss_dssp             HHHHHHHHHHHHTSSCBTTBCCCHHHHHHHHHHHHHHHHHHHSS-------STTTTTHHHHHHHHHHHHHHHHHHHT---
T ss_pred             HHHHHHHHHHhccccCCCCccccHHHHHHHHHHHHHHHHHHHHh-------cccchhhHHHHHHHHHHHHHHHhcCC---
Confidence            9999998876532           24568888888887776654       45678999999999999999999863   


Q ss_pred             CCCCcccccccccCcccccCCCCcccccccccccccccCHHHHHHHHHHHHHHHHHhHhHHHHHHhhhCCCCCCCccCCc
Q 013970          147 NDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSR  226 (433)
Q Consensus       147 ~~~~~~~~~~~~vd~~~~v~~ap~~~~P~~~~~g~P~f~~~~i~~~~~~~lv~~~esig~~~av~~~~~~~~~~~~~i~r  226 (433)
                                   |++. +.++||+++|.   |+.|+||++.+..++++++++++|++|++.++++.++++.+++++.||
T Consensus       203 -------------d~~~-v~~a~~~~lP~---~~~P~f~~~~i~~i~~i~lV~~~Eslg~~~av~~~~g~~~~~~~~~~r  265 (429)
T 3qe7_A          203 -------------DTTP-IINAHWFALPT---LYTPRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLLRDPGLHR  265 (429)
T ss_dssp             -------------TSSH-HHHSCSSCCCC---CCCCCCCHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCTCCCCCHHH
T ss_pred             -------------Cccc-ccccccccccC---CCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCcch
Confidence                         5543 56789999995   577999999999999999999999999999999999865546789999


Q ss_pred             cchhhhhHHHHhhhcCCCCCccccccchhhhhhccCCcchHHHHHHHHHHHHHHhhHHHHHHHhCcHHHHHHHHHHHHHH
Q 013970          227 GVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAY  306 (433)
Q Consensus       227 ~l~~dGl~s~laglfG~~~~tt~~~en~g~i~~Tgv~SR~~~~~ag~~lillg~~Pk~~al~~~IP~~Vlgg~liv~fg~  306 (433)
                      ++++||++|+++|+||++|.|+|+ ||+|+++.||++||++...+|+++++++++||++++++.||.||+||+++++||+
T Consensus       266 ~l~adGla~i~~glfGg~p~Tt~~-en~g~i~~tg~~sr~~~~~ag~~lillgl~pk~~al~~~IP~~vlgg~~l~lfg~  344 (429)
T 3qe7_A          266 SMFANGLSTVISGFFGSTPNTTYG-ENIGVMAITRVYSTWVIGGAAIFAILLSCVGKLAAAIQMIPLPVMGGVSLLLYGV  344 (429)
T ss_dssp             HHHHHHHHHHHHHHHTCCCEEECH-HHHHHHHHHTBCCHHHHHHHHHHHHHHTCCHHHHHHHTTSCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCcchHH-HhHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHH
Confidence            999999999999999999999999 9999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhhhhh--hcCcCCCccceeehhhHHHhhhhhhhHhhhhhhhcCCCCcccccccccccccccccccchhHHHHHHHH
Q 013970          307 VGAGGLSFL--QFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFL  384 (433)
Q Consensus       307 i~~~Gi~~l--~~v~~~~~Rn~~ivg~sl~~Gl~~p~~~~~~~~~~~~~~~~~~~~~lp~~~~~~l~sgi~~g~l~ai~L  384 (433)
                      +..+|+|++  +++|++++||.+|+++++.+|++...                    +|  ++.+..||+++|+++|++|
T Consensus       345 i~~~Gi~~l~~~~v~~~~~rn~~i~~~~l~~G~g~~~--------------------~~--~~~~~~~gi~~~~~~ai~l  402 (429)
T 3qe7_A          345 IGASGIRVLIESKVDYNKAQNLILTSVILIIGVSGAK--------------------VN--IGAAELKGMALATIVGIGL  402 (429)
T ss_dssp             HHHHHHHHHHHTTSCTTSHHHHHHHHHHHHHHHHCCC--------------------CC--SSSCCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHH--------------------Hh--hhhhccCcHHHHHHHHHHH
Confidence            999999999  89999988999999999999997431                    22  3567889999999999999


Q ss_pred             HhhcCCCCcchhhcccc
Q 013970          385 DNTLHKKDGQVRKDRGR  401 (433)
Q Consensus       385 n~~~~~~~~~~~~~~~~  401 (433)
                      |+++|++++.+++|..+
T Consensus       403 n~~l~~~~~~~~~~~~~  419 (429)
T 3qe7_A          403 SLIFKLISVLRPEEVVL  419 (429)
T ss_dssp             HHHHTCCC---------
T ss_pred             HHHhcCccccCCcceEe
Confidence            99999875444443333

PyMOL of 3qe7

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00